locus-tag class description OM948_00010 PF00437 Type II/IV secretion system protein OM948_00010 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain OM948_00015 PF02091 Glycyl-tRNA synthetase alpha subunit OM948_00020 PF05746 DALR anticodon binding domain OM948_00020 PF02092 Glycyl-tRNA synthetase beta subunit OM948_00030 PF00664 ABC transporter transmembrane region OM948_00030 PF00005 ABC transporter OM948_00030 PF03412 Peptidase C39 family OM948_00055 PF01103 Surface antigen OM948_00055 PF17243 POTRA domain TamA domain 1 OM948_00060 PF04357 TamB, inner membrane protein subunit of TAM complex OM948_00080 PF01011 PQQ enzyme repeat OM948_00080 PF13360 PQQ-like domain OM948_00080 PF13570 PQQ-like domain OM948_00095 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain OM948_00095 PF06165 Glycosyltransferase family 36 OM948_00105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_00105 PF00512 His Kinase A (phospho-acceptor) domain OM948_00110 PF02659 Putative manganese efflux pump OM948_00115 PF01614 Bacterial transcriptional regulator OM948_00115 PF09339 IclR helix-turn-helix domain OM948_00120 PF07690 Major Facilitator Superfamily OM948_00125 PF05336 L-rhamnose mutarotase OM948_00130 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain OM948_00130 PF13378 Enolase C-terminal domain-like OM948_00135 PF01557 Fumarylacetoacetate (FAA) hydrolase family OM948_00150 PF00248 Aldo/keto reductase family OM948_00160 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain OM948_00160 PF04616 Glycosyl hydrolases family 43 OM948_00180 PF00196 Bacterial regulatory proteins, luxR family OM948_00180 PF00072 Response regulator receiver domain OM948_00185 PF13193 AMP-binding enzyme C-terminal domain OM948_00185 PF00501 AMP-binding enzyme OM948_00185 PF16177 Acetyl-coenzyme A synthetase N-terminus OM948_00195 PF04341 Protein of unknown function, DUF485 OM948_00200 PF00474 Sodium:solute symporter family OM948_00210 PF09312 SurA N-terminal domain OM948_00210 PF00639 PPIC-type PPIASE domain OM948_00220 PF00480 ROK family OM948_00235 PF04226 Transglycosylase associated protein OM948_00240 PF01648 4'-phosphopantetheinyl transferase superfamily OM948_00245 PF09423 PhoD-like phosphatase OM948_00245 PF16655 PhoD-like phosphatase, N-terminal domain OM948_00250 PF16655 PhoD-like phosphatase, N-terminal domain OM948_00250 PF09423 PhoD-like phosphatase OM948_00255 PF02527 rRNA small subunit methyltransferase G OM948_00275 PF13533 Biotin-lipoyl like OM948_00280 PF00873 AcrB/AcrD/AcrF family OM948_00285 PF00830 Ribosomal L28 family OM948_00290 PF00471 Ribosomal protein L33 OM948_00295 PF04909 Amidohydrolase OM948_00300 PF04303 PrpF protein OM948_00305 PF03737 Aldolase/RraA OM948_00310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM948_00310 PF03466 LysR substrate binding domain OM948_00315 PF13091 PLD-like domain OM948_00315 PF13396 Phospholipase_D-nuclease N-terminal OM948_00325 PF13361 UvrD-like helicase C-terminal domain OM948_00325 PF00580 UvrD/REP helicase N-terminal domain OM948_00335 PF14602 Hexapeptide repeat of succinyl-transferase OM948_00335 PF12464 Maltose acetyltransferase OM948_00350 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 OM948_00355 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath OM948_00360 PF05638 Type VI secretion system effector, Hcp OM948_00365 PF07024 ImpE protein OM948_00370 PF04965 Gene 25-like lysozyme OM948_00375 PF05947 Type VI secretion system, TssF OM948_00385 PF10431 C-terminal, D2-small domain, of ClpB protein OM948_00385 PF17871 AAA lid domain OM948_00385 PF07724 AAA domain (Cdc48 subfamily) OM948_00385 PF00004 ATPase family associated with various cellular activities (AAA) OM948_00420 PF00328 Histidine phosphatase superfamily (branch 2) OM948_00435 PF08281 Sigma-70, region 4 OM948_00435 PF04542 Sigma-70 region 2 OM948_00445 PF00069 Protein kinase domain OM948_00445 PF03793 PASTA domain OM948_00460 PF04717 Type VI secretion system, phage-baseplate injector OM948_00475 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE OM948_00485 PF06761 Intracellular multiplication and human macrophage-killing OM948_00485 PF06744 Type VI secretion protein IcmF C-terminal OM948_00485 PF14331 ImcF-related N-terminal domain OM948_00500 PF00069 Protein kinase domain OM948_00520 PF06812 ImpA, N-terminal, type VI secretion system OM948_00530 PF01367 5'-3' exonuclease, C-terminal SAM fold OM948_00530 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain OM948_00530 PF01612 3'-5' exonuclease OM948_00530 PF00476 DNA polymerase family A OM948_00535 PF01218 Coproporphyrinogen III oxidase OM948_00550 PF00326 Prolyl oligopeptidase family OM948_00550 PF07676 WD40-like Beta Propeller Repeat OM948_00570 PF04820 Tryptophan halogenase OM948_00575 PF00550 Phosphopantetheine attachment site OM948_00585 PF01553 Acyltransferase OM948_00650 PF00535 Glycosyl transferase family 2 OM948_00660 PF00109 Beta-ketoacyl synthase, N-terminal domain OM948_00660 PF02801 Beta-ketoacyl synthase, C-terminal domain OM948_00665 PF05166 YcgL domain OM948_00680 PF00723 Glycosyl hydrolases family 15 OM948_00685 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain OM948_00685 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain OM948_00690 PF00999 Sodium/hydrogen exchanger family OM948_00690 PF02254 TrkA-N domain OM948_00695 PF00194 Eukaryotic-type carbonic anhydrase OM948_00700 PF00571 CBS domain OM948_00700 PF01769 Divalent cation transporter OM948_00700 PF03448 MgtE intracellular N domain OM948_00705 PF00583 Acetyltransferase (GNAT) family OM948_00705 PF13607 Succinyl-CoA ligase like flavodoxin domain OM948_00705 PF13380 CoA binding domain OM948_00715 PF03477 ATP cone domain OM948_00715 PF02867 Ribonucleotide reductase, barrel domain OM948_00715 PF00317 Ribonucleotide reductase, all-alpha domain OM948_00720 PF00268 Ribonucleotide reductase, small chain OM948_00730 PF00085 Thioredoxin OM948_00750 PF08546 Ketopantoate reductase PanE/ApbA C terminal OM948_00750 PF02558 Ketopantoate reductase PanE/ApbA OM948_00755 PF01061 ABC-2 type transporter OM948_00760 PF00005 ABC transporter OM948_00765 PF00970 Oxidoreductase FAD-binding domain OM948_00765 PF00175 Oxidoreductase NAD-binding domain OM948_00765 PF01383 CpcD/allophycocyanin linker domain OM948_00770 PF12833 Helix-turn-helix domain OM948_00770 PF01965 DJ-1/PfpI family OM948_00780 PF07715 TonB-dependent Receptor Plug Domain OM948_00780 PF00593 TonB dependent receptor OM948_00790 PF01545 Cation efflux family OM948_00795 PF02583 Metal-sensitive transcriptional repressor OM948_00800 PF01229 Glycosyl hydrolases family 39 OM948_00810 PF01381 Helix-turn-helix OM948_00820 PF00005 ABC transporter OM948_00835 PF04820 Tryptophan halogenase OM948_00855 PF00043 Glutathione S-transferase, C-terminal domain OM948_00855 PF02798 Glutathione S-transferase, N-terminal domain OM948_00860 PF00326 Prolyl oligopeptidase family OM948_00860 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region OM948_00890 PF00490 Delta-aminolevulinic acid dehydratase OM948_00905 PF03466 LysR substrate binding domain OM948_00905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM948_00915 PF00175 Oxidoreductase NAD-binding domain OM948_00915 PF00258 Flavodoxin OM948_00915 PF00667 FAD binding domain OM948_00930 PF01488 Shikimate / quinate 5-dehydrogenase OM948_00930 PF18317 Shikimate 5'-dehydrogenase C-terminal domain OM948_00930 PF08501 Shikimate dehydrogenase substrate binding domain OM948_00945 PF13307 Helicase C-terminal domain OM948_00945 PF06733 DEAD_2 OM948_00950 PF06628 Catalase-related immune-responsive OM948_00950 PF00199 Catalase OM948_00965 PF01207 Dihydrouridine synthase (Dus) OM948_00975 PF00486 Transcriptional regulatory protein, C terminal OM948_00975 PF00072 Response regulator receiver domain OM948_00980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_00995 PF06167 Glucose-regulated metallo-peptidase M90 OM948_01005 PF08279 HTH domain OM948_01005 PF03099 Biotin/lipoate A/B protein ligase family OM948_01005 PF02237 Biotin protein ligase C terminal domain OM948_01010 PF03309 Type III pantothenate kinase OM948_01025 PF02223 Thymidylate kinase OM948_01050 PF00491 Arginase family OM948_01065 PF05532 CsbD-like OM948_01070 PF00579 tRNA synthetases class I (W and Y) OM948_01075 PF00753 Metallo-beta-lactamase superfamily OM948_01095 PF00892 EamA-like transporter family OM948_01100 PF00892 EamA-like transporter family OM948_01120 PF00005 ABC transporter OM948_01125 PF13533 Biotin-lipoyl like OM948_01130 PF07730 Histidine kinase OM948_01135 PF00072 Response regulator receiver domain OM948_01135 PF00196 Bacterial regulatory proteins, luxR family OM948_01150 PF00199 Catalase OM948_01165 PF00883 Cytosol aminopeptidase family, catalytic domain OM948_01165 PF02789 Cytosol aminopeptidase family, N-terminal domain OM948_01175 PF01594 AI-2E family transporter OM948_01195 PF00595 PDZ domain OM948_01215 PF08521 Two-component sensor kinase N-terminal OM948_01215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_01215 PF00512 His Kinase A (phospho-acceptor) domain OM948_01220 PF00072 Response regulator receiver domain OM948_01220 PF00486 Transcriptional regulatory protein, C terminal OM948_01225 PF08338 Domain of unknown function (DUF1731) OM948_01225 PF01370 NAD dependent epimerase/dehydratase family OM948_01260 PF01139 tRNA-splicing ligase RtcB OM948_01270 PF00440 Bacterial regulatory proteins, tetR family OM948_01275 PF00970 Oxidoreductase FAD-binding domain OM948_01275 PF00175 Oxidoreductase NAD-binding domain OM948_01275 PF00111 2Fe-2S iron-sulfur cluster binding domain OM948_01280 PF00487 Fatty acid desaturase OM948_01285 PF12792 CSS motif domain associated with EAL OM948_01285 PF00563 EAL domain OM948_01300 PF01078 Magnesium chelatase, subunit ChlI OM948_01300 PF13335 Magnesium chelatase, subunit ChlI C-terminal OM948_01305 PF04380 Membrane fusogenic activity OM948_01310 PF00543 Nitrogen regulatory protein P-II OM948_01315 PF07555 beta-N-acetylglucosaminidase OM948_01315 PF00041 Fibronectin type III domain OM948_01315 PF02838 Glycosyl hydrolase family 20, domain 2 OM948_01315 PF00754 F5/8 type C domain OM948_01315 PF00963 Cohesin domain OM948_01340 PF17284 Spermidine synthase tetramerisation domain OM948_01345 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain OM948_01345 PF17944 Arginine decarboxylase C-terminal helical extension OM948_01345 PF17810 Arginine decarboxylase helical bundle domain OM948_01355 PF03033 Glycosyltransferase family 28 N-terminal domain OM948_01360 PF01757 Acyltransferase family OM948_01365 PF00106 short chain dehydrogenase OM948_01380 PF03485 Arginyl tRNA synthetase N terminal domain OM948_01380 PF00750 tRNA synthetases class I (R) OM948_01380 PF05746 DALR anticodon binding domain OM948_01385 PF04002 RadC-like JAB domain OM948_01390 PF02441 Flavoprotein OM948_01390 PF04127 DNA / pantothenate metabolism flavoprotein OM948_01395 PF00692 dUTPase OM948_01400 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I OM948_01400 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II OM948_01400 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III OM948_01400 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain OM948_01415 PF00535 Glycosyl transferase family 2 OM948_01420 PF01370 NAD dependent epimerase/dehydratase family OM948_01430 PF02195 ParB-like nuclease domain OM948_01430 PF17762 HTH domain found in ParB protein OM948_01435 PF13614 AAA domain OM948_01445 PF00156 Phosphoribosyl transferase domain OM948_01450 PF03372 Endonuclease/Exonuclease/phosphatase family OM948_01455 PF07690 Major Facilitator Superfamily OM948_01465 PF03702 Anhydro-N-acetylmuramic acid kinase OM948_01470 PF01551 Peptidase family M23 OM948_01470 PF04225 Opacity-associated protein A LysM-like domain OM948_01475 PF00579 tRNA synthetases class I (W and Y) OM948_01505 PF00171 Aldehyde dehydrogenase family OM948_01505 PF14850 DNA-binding domain of Proline dehydrogenase OM948_01505 PF18327 Proline utilization A proline dehydrogenase N-terminal domain OM948_01505 PF01619 Proline dehydrogenase OM948_01515 PF00116 Cytochrome C oxidase subunit II, periplasmic domain OM948_01515 PF02790 Cytochrome C oxidase subunit II, transmembrane domain OM948_01520 PF00115 Cytochrome C and Quinol oxidase polypeptide I OM948_01530 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 OM948_01535 PF00510 Cytochrome c oxidase subunit III OM948_01560 PF01040 UbiA prenyltransferase family OM948_01570 PF13593 SBF-like CPA transporter family (DUF4137) OM948_01575 PF01807 CHC2 zinc finger OM948_01575 PF10410 DnaB-helicase binding domain of primase OM948_01575 PF08278 DNA primase DnaG DnaB-binding OM948_01575 PF08275 DNA primase catalytic core, N-terminal domain OM948_01580 PF03631 Virulence factor BrkB OM948_01585 PF09424 Yqey-like protein OM948_01590 PF01165 Ribosomal protein S21 OM948_01595 PF00814 Glycoprotease family OM948_01600 PF02152 Dihydroneopterin aldolase OM948_01605 PF00933 Glycosyl hydrolase family 3 N terminal domain OM948_01605 PF14310 Fibronectin type III-like domain OM948_01605 PF01915 Glycosyl hydrolase family 3 C-terminal domain OM948_01610 PF07995 Glucose / Sorbosone dehydrogenase OM948_01615 PF05360 yiaA/B two helix domain OM948_01630 PF13520 Amino acid permease OM948_01640 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain OM948_01640 PF13378 Enolase C-terminal domain-like OM948_01650 PF01510 N-acetylmuramoyl-L-alanine amidase OM948_01655 PF01427 D-ala-D-ala dipeptidase OM948_01695 PF07063 Domain of unknown function (DUF1338) OM948_01710 PF00873 AcrB/AcrD/AcrF family OM948_01715 PF00873 AcrB/AcrD/AcrF family OM948_01720 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OM948_01725 PF01546 Peptidase family M20/M25/M40 OM948_01725 PF07687 Peptidase dimerisation domain OM948_01730 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term OM948_01730 PF14489 QueF-like protein OM948_01735 PF04972 BON domain OM948_01735 PF01476 LysM domain OM948_01745 PF03971 Monomeric isocitrate dehydrogenase OM948_01755 PF03466 LysR substrate binding domain OM948_01755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM948_01760 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) OM948_01765 PF07498 Rho termination factor, N-terminal domain OM948_01765 PF07497 Rho termination factor, RNA-binding domain OM948_01765 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain OM948_01770 PF00085 Thioredoxin OM948_01775 PF00270 DEAD/DEAH box helicase OM948_01775 PF00271 Helicase conserved C-terminal domain OM948_01775 PF12300 ATP-dependent RNA helicase RhlB OM948_01780 PF00005 ABC transporter OM948_01785 PF18075 FtsX extracellular domain OM948_01790 PF01339 CheB methylesterase OM948_01790 PF00072 Response regulator receiver domain OM948_01795 PF03167 Uracil DNA glycosylase superfamily OM948_01800 PF04545 Sigma-70, region 4 OM948_01800 PF04542 Sigma-70 region 2 OM948_01805 PF03458 UPF0126 domain OM948_01810 PF07992 Pyridine nucleotide-disulphide oxidoreductase OM948_01825 PF13417 Glutathione S-transferase, N-terminal domain OM948_01825 PF00043 Glutathione S-transferase, C-terminal domain OM948_01830 PF00271 Helicase conserved C-terminal domain OM948_01830 PF18074 Primosomal protein N C-terminal domain OM948_01830 PF00270 DEAD/DEAH box helicase OM948_01830 PF17764 3′ DNA-binding domain (3′BD) OM948_01830 PF18319 PriA DNA helicase Cys-rich region (CRR) domain OM948_01850 PF01554 MatE OM948_01855 PF01343 Peptidase family S49 OM948_01880 PF01300 Telomere recombination OM948_01885 PF01131 DNA topoisomerase OM948_01885 PF01751 Toprim domain OM948_01885 PF13368 Topoisomerase C-terminal repeat OM948_01895 PF07963 Prokaryotic N-terminal methylation motif OM948_01895 PF00114 Pilin (bacterial filament) OM948_01900 PF04361 Protein of unknown function (DUF494) OM948_01905 PF02481 DNA recombination-mediator protein A OM948_01905 PF17782 DprA winged helix domain OM948_01910 PF01476 LysM domain OM948_01915 PF01327 Polypeptide deformylase OM948_01920 PF02911 Formyl transferase, C-terminal domain OM948_01920 PF00551 Formyl transferase OM948_01925 PF01029 NusB family OM948_01925 PF01189 16S rRNA methyltransferase RsmB/F OM948_01940 PF00535 Glycosyl transferase family 2 OM948_01960 PF00925 GTP cyclohydrolase II OM948_01975 PF03279 Bacterial lipid A biosynthesis acyltransferase OM948_01980 PF02580 D-Tyr-tRNA(Tyr) deacylase OM948_01985 PF04546 Sigma-70, non-essential region OM948_01985 PF03979 Sigma-70 factor, region 1.1 OM948_01985 PF00140 Sigma-70 factor, region 1.2 OM948_01985 PF04545 Sigma-70, region 4 OM948_01985 PF04542 Sigma-70 region 2 OM948_01985 PF04539 Sigma-70 region 3 OM948_02010 PF06791 Prophage tail length tape measure protein OM948_02075 PF02899 Phage integrase, N-terminal SAM-like domain OM948_02075 PF00589 Phage integrase family OM948_02085 PF13356 Arm DNA-binding domain OM948_02085 PF00589 Phage integrase family OM948_02090 PF00145 C-5 cytosine-specific DNA methylase OM948_02100 PF03852 DNA mismatch endonuclease Vsr OM948_02130 PF08676 MutL C terminal dimerisation domain OM948_02130 PF01119 DNA mismatch repair protein, C-terminal domain OM948_02135 PF00140 Sigma-70 factor, region 1.2 OM948_02135 PF04546 Sigma-70, non-essential region OM948_02135 PF04539 Sigma-70 region 3 OM948_02135 PF04542 Sigma-70 region 2 OM948_02135 PF04545 Sigma-70, region 4 OM948_02135 PF03979 Sigma-70 factor, region 1.1 OM948_02190 PF04002 RadC-like JAB domain OM948_02225 PF00557 Metallopeptidase family M24 OM948_02235 PF01740 STAS domain OM948_02235 PF00916 Sulfate permease family OM948_02265 PF02525 Flavodoxin-like fold OM948_02270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM948_02270 PF03466 LysR substrate binding domain OM948_02285 PF00672 HAMP domain OM948_02285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM948_02285 PF02203 Tar ligand binding domain homologue OM948_02300 PF01042 Endoribonuclease L-PSP OM948_02305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM948_02305 PF03466 LysR substrate binding domain OM948_02315 PF00005 ABC transporter OM948_02335 PF00593 TonB dependent receptor OM948_02335 PF07715 TonB-dependent Receptor Plug Domain OM948_02380 PF00107 Zinc-binding dehydrogenase OM948_02380 PF13823 Alcohol dehydrogenase GroES-associated OM948_02380 PF08240 Alcohol dehydrogenase GroES-like domain OM948_02395 PF00005 ABC transporter OM948_02395 PF00664 ABC transporter transmembrane region OM948_02405 PF03275 UDP-galactopyranose mutase OM948_02415 PF16363 GDP-mannose 4,6 dehydratase OM948_02435 PF02322 Cytochrome bd terminal oxidase subunit II OM948_02440 PF01654 Cytochrome bd terminal oxidase subunit I OM948_02450 PF00158 Sigma-54 interaction domain OM948_02450 PF02954 Bacterial regulatory protein, Fis family OM948_02450 PF00072 Response regulator receiver domain OM948_02465 PF03705 CheR methyltransferase, all-alpha domain OM948_02465 PF08448 PAS fold OM948_02465 PF01739 CheR methyltransferase, SAM binding domain OM948_02465 PF01339 CheB methylesterase OM948_02485 PF05067 Manganese containing catalase OM948_02490 PF05974 Domain of unknown function (DUF892) OM948_02505 PF02743 Cache domain OM948_02505 PF06580 Histidine kinase OM948_02505 PF00672 HAMP domain OM948_02505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_02510 PF00072 Response regulator receiver domain OM948_02510 PF04397 LytTr DNA-binding domain OM948_02520 PF13520 Amino acid permease OM948_02535 PF01431 Peptidase family M13 OM948_02535 PF05649 Peptidase family M13 OM948_02545 PF00248 Aldo/keto reductase family OM948_02550 PF03358 NADPH-dependent FMN reductase OM948_02555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM948_02555 PF03466 LysR substrate binding domain OM948_02565 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase OM948_02575 PF03167 Uracil DNA glycosylase superfamily OM948_02580 PF02469 Fasciclin domain OM948_02585 PF00999 Sodium/hydrogen exchanger family OM948_02595 PF01061 ABC-2 type transporter OM948_02620 PF00691 OmpA family OM948_02620 PF13677 Membrane MotB of proton-channel complex MotA/MotB OM948_02625 PF01618 MotA/TolQ/ExbB proton channel family OM948_02635 PF01641 SelR domain OM948_02645 PF01037 Lrp/AsnC ligand binding domain OM948_02650 PF01266 FAD dependent oxidoreductase OM948_02655 PF00842 Alanine racemase, C-terminal domain OM948_02655 PF01168 Alanine racemase, N-terminal domain OM948_02675 PF00989 PAS fold OM948_02675 PF00512 His Kinase A (phospho-acceptor) domain OM948_02675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_02685 PF07995 Glucose / Sorbosone dehydrogenase OM948_02695 PF05175 Methyltransferase small domain OM948_02695 PF08468 Methyltransferase small domain N-terminal OM948_02700 PF00849 RNA pseudouridylate synthase OM948_02700 PF01479 S4 domain OM948_02705 PF13419 Haloacid dehalogenase-like hydrolase OM948_02725 PF00989 PAS fold OM948_02725 PF00072 Response regulator receiver domain OM948_02725 PF18415 Histidine kinase receptor ArcB trans-membrane domain OM948_02725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_02725 PF01627 Hpt domain OM948_02725 PF00512 His Kinase A (phospho-acceptor) domain OM948_02735 PF04461 Protein of unknown function (DUF520) OM948_02740 PF00892 EamA-like transporter family OM948_02745 PF00005 ABC transporter OM948_02745 PF09383 NIL domain OM948_02750 PF00528 Binding-protein-dependent transport system inner membrane component OM948_02755 PF03180 NLPA lipoprotein OM948_02785 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) OM948_02785 PF00364 Biotin-requiring enzyme OM948_02785 PF02817 e3 binding domain OM948_02795 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain OM948_02795 PF07992 Pyridine nucleotide-disulphide oxidoreductase OM948_02815 PF00119 ATP synthase A chain OM948_02820 PF00137 ATP synthase subunit C OM948_02825 PF00430 ATP synthase B/B' CF(0) OM948_02830 PF00213 ATP synthase delta (OSCP) subunit OM948_02835 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain OM948_02835 PF00306 ATP synthase alpha/beta chain, C terminal domain OM948_02835 PF02874 ATP synthase alpha/beta family, beta-barrel domain OM948_02840 PF00231 ATP synthase OM948_02845 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain OM948_02845 PF02874 ATP synthase alpha/beta family, beta-barrel domain OM948_02850 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain OM948_02850 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain OM948_02865 PF12804 MobA-like NTP transferase domain OM948_02865 PF00132 Bacterial transferase hexapeptide (six repeats) OM948_02865 PF14602 Hexapeptide repeat of succinyl-transferase OM948_02870 PF00512 His Kinase A (phospho-acceptor) domain OM948_02870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_02875 PF02954 Bacterial regulatory protein, Fis family OM948_02875 PF00158 Sigma-54 interaction domain OM948_02875 PF00072 Response regulator receiver domain OM948_02885 PF02687 FtsX-like permease family OM948_02885 PF00005 ABC transporter OM948_02885 PF12704 MacB-like periplasmic core domain OM948_02890 PF12704 MacB-like periplasmic core domain OM948_02890 PF02687 FtsX-like permease family OM948_02895 PF00005 ABC transporter OM948_02900 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OM948_02905 PF01380 SIS domain OM948_02930 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily OM948_02935 PF05275 Copper resistance protein B precursor (CopB) OM948_02940 PF07731 Multicopper oxidase OM948_02940 PF07732 Multicopper oxidase OM948_02940 PF00394 Multicopper oxidase OM948_02955 PF01432 Peptidase family M3 OM948_02965 PF00109 Beta-ketoacyl synthase, N-terminal domain OM948_02965 PF02801 Beta-ketoacyl synthase, C-terminal domain OM948_02970 PF07977 FabA-like domain OM948_02975 PF00817 impB/mucB/samB family OM948_02975 PF11799 impB/mucB/samB family C-terminal domain OM948_02980 PF13419 Haloacid dehalogenase-like hydrolase OM948_02985 PF07715 TonB-dependent Receptor Plug Domain OM948_02985 PF00593 TonB dependent receptor OM948_02990 PF00756 Putative esterase OM948_03000 PF13185 GAF domain OM948_03030 PF01242 6-pyruvoyl tetrahydropterin synthase OM948_03035 PF07715 TonB-dependent Receptor Plug Domain OM948_03035 PF00593 TonB dependent receptor OM948_03045 PF00270 DEAD/DEAH box helicase OM948_03045 PF00271 Helicase conserved C-terminal domain OM948_03055 PF02798 Glutathione S-transferase, N-terminal domain OM948_03055 PF14497 Glutathione S-transferase, C-terminal domain OM948_03060 PF00437 Type II/IV secretion system protein OM948_03080 PF00571 CBS domain OM948_03080 PF00291 Pyridoxal-phosphate dependent enzyme OM948_03085 PF01053 Cys/Met metabolism PLP-dependent enzyme OM948_03095 PF00005 ABC transporter OM948_03095 PF14524 Wzt C-terminal domain OM948_03105 PF00535 Glycosyl transferase family 2 OM948_03130 PF01593 Flavin containing amine oxidoreductase OM948_03135 PF01370 NAD dependent epimerase/dehydratase family OM948_03145 PF00106 short chain dehydrogenase OM948_03150 PF04030 D-arabinono-1,4-lactone oxidase OM948_03150 PF01565 FAD binding domain OM948_03155 PF01040 UbiA prenyltransferase family OM948_03165 PF01012 Electron transfer flavoprotein domain OM948_03165 PF00766 Electron transfer flavoprotein FAD-binding domain OM948_03170 PF01012 Electron transfer flavoprotein domain OM948_03175 PF16363 GDP-mannose 4,6 dehydratase OM948_03180 PF00483 Nucleotidyl transferase OM948_03185 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase OM948_03190 PF04321 RmlD substrate binding domain OM948_03195 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain OM948_03195 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain OM948_03195 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain OM948_03200 PF01050 Mannose-6-phosphate isomerase OM948_03200 PF00483 Nucleotidyl transferase OM948_03205 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain OM948_03205 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II OM948_03205 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I OM948_03205 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III OM948_03210 PF01144 Coenzyme A transferase OM948_03215 PF01144 Coenzyme A transferase OM948_03220 PF14307 Glycosyltransferase WbsX OM948_03220 PF05045 Rhamnan synthesis protein F OM948_03240 PF02470 MlaD protein OM948_03240 PF03886 ABC-type transport auxiliary lipoprotein component OM948_03245 PF00005 ABC transporter OM948_03250 PF02405 Permease MlaE OM948_03260 PF00816 H-NS histone family OM948_03265 PF03129 Anticodon binding domain OM948_03265 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) OM948_03265 PF04073 Aminoacyl-tRNA editing domain OM948_03275 PF01066 CDP-alcohol phosphatidyltransferase OM948_03295 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain OM948_03295 PF01464 Transglycosylase SLT domain OM948_03310 PF08264 Anticodon-binding domain of tRNA OM948_03310 PF00133 tRNA synthetases class I (I, L, M and V) OM948_03310 PF10458 Valyl tRNA synthetase tRNA binding arm OM948_03325 PF02789 Cytosol aminopeptidase family, N-terminal domain OM948_03325 PF00883 Cytosol aminopeptidase family, catalytic domain OM948_03335 PF03739 Lipopolysaccharide export system permease LptF/LptG OM948_03350 PF00589 Phage integrase family OM948_03350 PF02899 Phage integrase, N-terminal SAM-like domain OM948_03355 PF13098 Thioredoxin-like domain OM948_03355 PF10411 Disulfide bond isomerase protein N-terminus OM948_03360 PF02769 AIR synthase related protein, C-terminal domain OM948_03360 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal OM948_03360 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain OM948_03370 PF13018 Extended Signal Peptide of Type V secretion system OM948_03370 PF05662 Coiled stalk of trimeric autotransporter adhesin OM948_03370 PF03895 YadA-like membrane anchor domain OM948_03370 PF05658 Head domain of trimeric autotransporter adhesin OM948_03375 PF00082 Subtilase family OM948_03375 PF04151 Bacterial pre-peptidase C-terminal domain OM948_03380 PF05662 Coiled stalk of trimeric autotransporter adhesin OM948_03380 PF05658 Head domain of trimeric autotransporter adhesin OM948_03380 PF03895 YadA-like membrane anchor domain OM948_03380 PF13018 Extended Signal Peptide of Type V secretion system OM948_03385 PF00082 Subtilase family OM948_03385 PF04151 Bacterial pre-peptidase C-terminal domain OM948_03390 PF00437 Type II/IV secretion system protein OM948_03390 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain OM948_03395 PF00482 Type II secretion system (T2SS), protein F OM948_03400 PF08334 Type II secretion system (T2SS), protein G OM948_03405 PF12019 Type II transport protein GspH OM948_03410 PF07963 Prokaryotic N-terminal methylation motif OM948_03420 PF03934 Type II secretion system (T2SS), protein K OM948_03425 PF05137 Fimbrial assembly protein (PilN) OM948_03430 PF10741 Type II secretion system (T2SS), protein M subtype b OM948_03440 PF03958 Bacterial type II/III secretion system short domain OM948_03440 PF00263 Bacterial type II and III secretion system protein OM948_03450 PF07702 UTRA domain OM948_03450 PF00392 Bacterial regulatory proteins, gntR family OM948_03460 PF00593 TonB dependent receptor OM948_03460 PF07715 TonB-dependent Receptor Plug Domain OM948_03495 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family OM948_03495 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain OM948_03510 PF00535 Glycosyl transferase family 2 OM948_03510 PF03552 Cellulose synthase OM948_03510 PF07238 PilZ domain OM948_03515 PF03170 Bacterial cellulose synthase subunit OM948_03520 PF01270 Glycosyl hydrolases family 8 OM948_03525 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) OM948_03540 PF03960 ArsC family OM948_03545 PF01327 Polypeptide deformylase OM948_03550 PF02645 Uncharacterised protein, DegV family COG1307 OM948_03570 PF01979 Amidohydrolase family OM948_03575 PF01979 Amidohydrolase family OM948_03590 PF00462 Glutaredoxin OM948_03595 PF01522 Polysaccharide deacetylase OM948_03610 PF00155 Aminotransferase class I and II OM948_03615 PF00005 ABC transporter OM948_03615 PF00664 ABC transporter transmembrane region OM948_03615 PF03412 Peptidase C39 family OM948_03655 PF03193 RsgA GTPase OM948_03675 PF00128 Alpha amylase, catalytic domain OM948_03690 PF00356 Bacterial regulatory proteins, lacI family OM948_03695 PF00106 short chain dehydrogenase OM948_03700 PF03600 Citrate transporter OM948_03710 PF00072 Response regulator receiver domain OM948_03710 PF00486 Transcriptional regulatory protein, C terminal OM948_03715 PF08521 Two-component sensor kinase N-terminal OM948_03715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_03715 PF00512 His Kinase A (phospho-acceptor) domain OM948_03725 PF00196 Bacterial regulatory proteins, luxR family OM948_03725 PF00072 Response regulator receiver domain OM948_03740 PF00248 Aldo/keto reductase family OM948_03745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM948_03745 PF03466 LysR substrate binding domain OM948_03755 PF07690 Major Facilitator Superfamily OM948_03760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_03760 PF00512 His Kinase A (phospho-acceptor) domain OM948_03760 PF02743 Cache domain OM948_03770 PF00375 Sodium:dicarboxylate symporter family OM948_03775 PF01515 Phosphate acetyl/butaryl transferase OM948_03775 PF00390 Malic enzyme, N-terminal domain OM948_03775 PF03949 Malic enzyme, NAD binding domain OM948_03805 PF00664 ABC transporter transmembrane region OM948_03805 PF00005 ABC transporter OM948_03805 PF03412 Peptidase C39 family OM948_03830 PF03279 Bacterial lipid A biosynthesis acyltransferase OM948_03835 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) OM948_03840 PF02321 Outer membrane efflux protein OM948_03855 PF00990 Diguanylate cyclase, GGDEF domain OM948_03860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM948_03865 PF00330 Aconitase family (aconitate hydratase) OM948_03870 PF00694 Aconitase C-terminal domain OM948_03875 PF00180 Isocitrate/isopropylmalate dehydrogenase OM948_03880 PF08502 LeuA allosteric (dimerisation) domain OM948_03880 PF00682 HMGL-like OM948_03885 PF00291 Pyridoxal-phosphate dependent enzyme OM948_03895 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain OM948_03895 PF00205 Thiamine pyrophosphate enzyme, central domain OM948_03895 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain OM948_03900 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain OM948_03900 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain OM948_03910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM948_03910 PF00672 HAMP domain OM948_03915 PF00593 TonB dependent receptor OM948_03915 PF07715 TonB-dependent Receptor Plug Domain OM948_03920 PF01964 Radical SAM ThiC family OM948_03920 PF13667 ThiC-associated domain OM948_03925 PF18500 CadC C-terminal domain 1 OM948_03925 PF00486 Transcriptional regulatory protein, C terminal OM948_03930 PF12833 Helix-turn-helix domain OM948_03935 PF07715 TonB-dependent Receptor Plug Domain OM948_03935 PF00593 TonB dependent receptor OM948_03945 PF00719 Inorganic pyrophosphatase OM948_03955 PF03030 Inorganic H+ pyrophosphatase OM948_03965 PF00365 Phosphofructokinase OM948_03975 PF08245 Mur ligase middle domain OM948_03975 PF02875 Mur ligase family, glutamate ligase domain OM948_03975 PF01225 Mur ligase family, catalytic domain OM948_03990 PF01569 PAP2 superfamily OM948_04005 PF00520 Ion transport protein OM948_04005 PF00027 Cyclic nucleotide-binding domain OM948_04010 PF00202 Aminotransferase class-III OM948_04025 PF01593 Flavin containing amine oxidoreductase OM948_04030 PF00034 Cytochrome c OM948_04030 PF13442 Cytochrome C oxidase, cbb3-type, subunit III OM948_04040 PF00155 Aminotransferase class I and II OM948_04045 PF00127 Copper binding proteins, plastocyanin/azurin family OM948_04050 PF17874 MalT-like TPR region OM948_04050 PF00196 Bacterial regulatory proteins, luxR family OM948_04055 PF00202 Aminotransferase class-III OM948_04070 PF02581 Thiamine monophosphate synthase OM948_04075 PF00301 Rubredoxin OM948_04080 PF13369 Transglutaminase-like superfamily OM948_04090 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) OM948_04100 PF01812 5-formyltetrahydrofolate cyclo-ligase family OM948_04110 PF05164 Cell division protein ZapA OM948_04120 PF03695 Uncharacterised protein family (UPF0149) OM948_04125 PF05195 Aminopeptidase P, N-terminal domain OM948_04125 PF00557 Metallopeptidase family M24 OM948_04135 PF00557 Metallopeptidase family M24 OM948_04150 PF04055 Radical SAM superfamily OM948_04150 PF06969 HemN C-terminal domain OM948_04155 PF01725 Ham1 family OM948_04165 PF03725 3' exoribonuclease family, domain 2 OM948_04165 PF01138 3' exoribonuclease family, domain 1 OM948_04170 PF03755 YicC-like family, N-terminal region OM948_04170 PF08340 Domain of unknown function (DUF1732) OM948_04175 PF00625 Guanylate kinase OM948_04180 PF01192 RNA polymerase Rpb6 OM948_04185 PF13291 ACT domain OM948_04185 PF02824 TGS domain OM948_04185 PF04607 Region found in RelA / SpoT proteins OM948_04190 PF03466 LysR substrate binding domain OM948_04190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM948_04195 PF00701 Dihydrodipicolinate synthetase family OM948_04200 PF00171 Aldehyde dehydrogenase family OM948_04205 PF07690 Major Facilitator Superfamily OM948_04210 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain OM948_04210 PF13378 Enolase C-terminal domain-like OM948_04215 PF03573 outer membrane porin, OprD family OM948_04220 PF08666 SAF domain OM948_04220 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus OM948_04225 PF01042 Endoribonuclease L-PSP OM948_04230 PF17191 RecG wedge domain OM948_04230 PF00271 Helicase conserved C-terminal domain OM948_04230 PF00270 DEAD/DEAH box helicase OM948_04235 PF01156 Inosine-uridine preferring nucleoside hydrolase OM948_04240 PF01197 Ribosomal protein L31 OM948_04245 PF00285 Citrate synthase, C-terminal domain OM948_04255 PF17092 Penicillin-binding protein OB-like domain OM948_04255 PF00912 Transglycosylase OM948_04255 PF00905 Penicillin binding protein transpeptidase domain OM948_04260 PF11104 Type IV pilus assembly protein PilM; OM948_04265 PF05137 Fimbrial assembly protein (PilN) OM948_04270 PF04350 Pilus assembly protein, PilO OM948_04275 PF04351 Pilus assembly protein, PilP OM948_04280 PF07660 Secretin and TonB N terminus short domain OM948_04280 PF03958 Bacterial type II/III secretion system short domain OM948_04280 PF00263 Bacterial type II and III secretion system protein OM948_04280 PF11741 AMIN domain OM948_04285 PF17863 AAA lid domain OM948_04285 PF07726 ATPase family associated with various cellular activities (AAA) OM948_04305 PF00092 von Willebrand factor type A domain OM948_04305 PF07584 Aerotolerance regulator N-terminal OM948_04315 PF00375 Sodium:dicarboxylate symporter family OM948_04320 PF00456 Transketolase, thiamine diphosphate binding domain OM948_04320 PF02780 Transketolase, C-terminal domain OM948_04320 PF02779 Transketolase, pyrimidine binding domain OM948_04330 PF07715 TonB-dependent Receptor Plug Domain OM948_04330 PF00593 TonB dependent receptor OM948_04335 PF01551 Peptidase family M23 OM948_04335 PF04225 Opacity-associated protein A LysM-like domain OM948_04340 PF01476 LysM domain OM948_04340 PF03734 L,D-transpeptidase catalytic domain OM948_04380 PF00005 ABC transporter OM948_04380 PF03459 TOBE domain OM948_04385 PF00528 Binding-protein-dependent transport system inner membrane component OM948_04395 PF04273 Putative phosphatase (DUF442) OM948_04395 PF00753 Metallo-beta-lactamase superfamily OM948_04405 PF03922 OmpW family OM948_04410 PF03922 OmpW family OM948_04420 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain OM948_04420 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain OM948_04440 PF00162 Phosphoglycerate kinase OM948_04445 PF13419 Haloacid dehalogenase-like hydrolase OM948_04450 PF00224 Pyruvate kinase, barrel domain OM948_04450 PF02887 Pyruvate kinase, alpha/beta domain OM948_04455 PF00274 Fructose-bisphosphate aldolase class-I OM948_04460 PF01661 Macro domain OM948_04470 PF00291 Pyridoxal-phosphate dependent enzyme OM948_04475 PF10414 Sirohaem synthase dimerisation region OM948_04475 PF14824 Sirohaem biosynthesis protein central OM948_04475 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases OM948_04480 PF03466 LysR substrate binding domain OM948_04480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM948_04490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_04490 PF00512 His Kinase A (phospho-acceptor) domain OM948_04490 PF01627 Hpt domain OM948_04490 PF00072 Response regulator receiver domain OM948_04510 PF01507 Phosphoadenosine phosphosulfate reductase family OM948_04515 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain OM948_04515 PF01077 Nitrite and sulphite reductase 4Fe-4S domain OM948_04520 PF00258 Flavodoxin OM948_04520 PF00175 Oxidoreductase NAD-binding domain OM948_04520 PF00667 FAD binding domain OM948_04525 PF01507 Phosphoadenosine phosphosulfate reductase family OM948_04530 PF00009 Elongation factor Tu GTP binding domain OM948_04535 PF00529 HlyD membrane-fusion protein of T1SS OM948_04535 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OM948_04540 PF00873 AcrB/AcrD/AcrF family OM948_04545 PF01433 Peptidase family M1 domain OM948_04545 PF11838 ERAP1-like C-terminal domain OM948_04555 PF08032 RNA 2'-O ribose methyltransferase substrate binding OM948_04555 PF00588 SpoU rRNA Methylase family OM948_04560 PF00135 Carboxylesterase family OM948_04565 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation OM948_04565 PF14508 Glycosyl-hydrolase 97 N-terminal OM948_04565 PF10566 Glycoside hydrolase 97 OM948_04570 PF00703 Glycosyl hydrolases family 2 OM948_04570 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain OM948_04570 PF02837 Glycosyl hydrolases family 2, sugar binding domain OM948_04580 PF00356 Bacterial regulatory proteins, lacI family OM948_04590 PF01741 Large-conductance mechanosensitive channel, MscL OM948_04595 PF01557 Fumarylacetoacetate (FAA) hydrolase family OM948_04610 PF02080 TrkA-C domain OM948_04610 PF03600 Citrate transporter OM948_04615 PF02390 Putative methyltransferase OM948_04620 PF05690 Thiazole biosynthesis protein ThiG OM948_04630 PF03797 Autotransporter beta-domain OM948_04630 PF00657 GDSL-like Lipase/Acylhydrolase OM948_04660 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) OM948_04660 PF00128 Alpha amylase, catalytic domain OM948_04665 PF08443 RimK-like ATP-grasp domain OM948_04665 PF18030 RimK PreATP-grasp domain OM948_04675 PF00486 Transcriptional regulatory protein, C terminal OM948_04675 PF00072 Response regulator receiver domain OM948_04680 PF00989 PAS fold OM948_04680 PF00512 His Kinase A (phospho-acceptor) domain OM948_04680 PF11808 Phosphate regulon sensor protein PhoR OM948_04680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_04695 PF00872 Transposase, Mutator family OM948_04705 PF01121 Dephospho-CoA kinase OM948_04710 PF01478 Type IV leader peptidase family OM948_04710 PF06750 Bacterial Peptidase A24 N-terminal domain OM948_04735 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain OM948_04735 PF00437 Type II/IV secretion system protein OM948_04740 PF00072 Response regulator receiver domain OM948_04740 PF00158 Sigma-54 interaction domain OM948_04740 PF02954 Bacterial regulatory protein, Fis family OM948_04745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_04745 PF00512 His Kinase A (phospho-acceptor) domain OM948_04750 PF00549 CoA-ligase OM948_04750 PF08442 ATP-grasp domain OM948_04755 PF02629 CoA binding domain OM948_04755 PF00549 CoA-ligase OM948_04770 PF00795 Carbon-nitrogen hydrolase OM948_04770 PF02540 NAD synthase OM948_04780 PF13525 Outer membrane lipoprotein OM948_04785 PF00849 RNA pseudouridylate synthase OM948_04790 PF02578 Multi-copper polyphenol oxidoreductase laccase OM948_04800 PF04134 Protein of unknown function, DUF393 OM948_04805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM948_04805 PF02203 Tar ligand binding domain homologue OM948_04805 PF00672 HAMP domain OM948_04810 PF01011 PQQ enzyme repeat OM948_04815 PF00982 Glycosyltransferase family 20 OM948_04820 PF00723 Glycosyl hydrolases family 15 OM948_04825 PF02358 Trehalose-phosphatase OM948_04830 PF00593 TonB dependent receptor OM948_04830 PF07715 TonB-dependent Receptor Plug Domain OM948_04865 PF01541 GIY-YIG catalytic domain OM948_04875 PF00296 Luciferase-like monooxygenase OM948_04880 PF00248 Aldo/keto reductase family OM948_04885 PF09084 NMT1/THI5 like OM948_04890 PF00528 Binding-protein-dependent transport system inner membrane component OM948_04895 PF00005 ABC transporter OM948_04900 PF00004 ATPase family associated with various cellular activities (AAA) OM948_04900 PF17871 AAA lid domain OM948_04900 PF02861 Clp amino terminal domain, pathogenicity island component OM948_04900 PF10431 C-terminal, D2-small domain, of ClpB protein OM948_04900 PF07724 AAA domain (Cdc48 subfamily) OM948_04905 PF07715 TonB-dependent Receptor Plug Domain OM948_04905 PF00593 TonB dependent receptor OM948_04925 PF12557 Cob(I)alamin adenosyltransferase N terminal OM948_04925 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP OM948_04930 PF17113 Regulatory signalling modulator protein AmpE OM948_04930 PF03186 CobD/Cbib protein OM948_04935 PF00155 Aminotransferase class I and II OM948_04945 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase OM948_04950 PF02277 Phosphoribosyltransferase OM948_04960 PF02654 Cobalamin-5-phosphate synthase OM948_04975 PF00872 Transposase, Mutator family OM948_04985 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain OM948_04985 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain OM948_04990 PF04183 IucA / IucC family OM948_04990 PF06276 Ferric iron reductase FhuF-like transporter OM948_04995 PF07690 Major Facilitator Superfamily OM948_05000 PF06276 Ferric iron reductase FhuF-like transporter OM948_05000 PF04183 IucA / IucC family OM948_05010 PF07715 TonB-dependent Receptor Plug Domain OM948_05010 PF07660 Secretin and TonB N terminus short domain OM948_05010 PF00593 TonB dependent receptor OM948_05020 PF02254 TrkA-N domain OM948_05020 PF00999 Sodium/hydrogen exchanger family OM948_05025 PF00067 Cytochrome P450 OM948_05030 PF00593 TonB dependent receptor OM948_05030 PF07715 TonB-dependent Receptor Plug Domain OM948_05035 PF00593 TonB dependent receptor OM948_05035 PF07715 TonB-dependent Receptor Plug Domain OM948_05045 PF07715 TonB-dependent Receptor Plug Domain OM948_05045 PF00593 TonB dependent receptor OM948_05050 PF00005 ABC transporter OM948_05050 PF12848 ABC transporter OM948_05060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM948_05060 PF03466 LysR substrate binding domain OM948_05080 PF05506 Domain of unknown function (DUF756) OM948_05080 PF04185 Phosphoesterase family OM948_05090 PF07690 Major Facilitator Superfamily OM948_05105 PF02938 GAD domain OM948_05105 PF00152 tRNA synthetases class II (D, K and N) OM948_05105 PF01336 OB-fold nucleic acid binding domain OM948_05120 PF01709 Transcriptional regulator OM948_05125 PF02075 Crossover junction endodeoxyribonuclease RuvC OM948_05130 PF07499 RuvA, C-terminal domain OM948_05130 PF01330 RuvA N terminal domain OM948_05135 PF02705 K+ potassium transporter OM948_05140 PF05491 RuvB C-terminal winged helix domain OM948_05140 PF05496 Holliday junction DNA helicase RuvB P-loop domain OM948_05140 PF17864 RuvB AAA lid domain OM948_05145 PF03061 Thioesterase superfamily OM948_05150 PF01618 MotA/TolQ/ExbB proton channel family OM948_05155 PF02472 Biopolymer transport protein ExbD/TolR OM948_05165 PF07676 WD40-like Beta Propeller Repeat OM948_05165 PF04052 TolB amino-terminal domain OM948_05170 PF00691 OmpA family OM948_05180 PF04055 Radical SAM superfamily OM948_05190 PF06508 Queuosine biosynthesis protein QueC OM948_05195 PF07536 HWE histidine kinase OM948_05195 PF13426 PAS domain OM948_05195 PF13581 Histidine kinase-like ATPase domain OM948_05205 PF03466 LysR substrate binding domain OM948_05205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM948_05210 PF01810 LysE type translocator OM948_05215 PF02203 Tar ligand binding domain homologue OM948_05215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM948_05215 PF00672 HAMP domain OM948_05255 PF09382 RQC domain OM948_05255 PF00570 HRDC domain OM948_05255 PF00271 Helicase conserved C-terminal domain OM948_05255 PF00270 DEAD/DEAH box helicase OM948_05255 PF16124 RecQ zinc-binding OM948_05260 PF00210 Ferritin-like domain OM948_05265 PF00270 DEAD/DEAH box helicase OM948_05265 PF11898 Domain of unknown function (DUF3418) OM948_05265 PF04408 Helicase associated domain (HA2) OM948_05265 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold OM948_05265 PF00271 Helicase conserved C-terminal domain OM948_05280 PF02685 Glucokinase OM948_05295 PF04055 Radical SAM superfamily OM948_05295 PF13186 Iron-sulfur cluster-binding domain OM948_05300 PF05402 Coenzyme PQQ synthesis protein D (PqqD) OM948_05305 PF03070 TENA/THI-4/PQQC family OM948_05310 PF12706 Beta-lactamase superfamily domain OM948_05315 PF08042 PqqA family OM948_05320 PF02824 TGS domain OM948_05320 PF13291 ACT domain OM948_05320 PF04607 Region found in RelA / SpoT proteins OM948_05330 PF01501 Glycosyl transferase family 8 OM948_05330 PF00535 Glycosyl transferase family 2 OM948_05335 PF00912 Transglycosylase OM948_05335 PF00905 Penicillin binding protein transpeptidase domain OM948_05335 PF14814 Bifunctional transglycosylase second domain OM948_05345 PF13307 Helicase C-terminal domain OM948_05345 PF04851 Type III restriction enzyme, res subunit OM948_05350 PF00814 Glycoprotease family OM948_05355 PF03747 ADP-ribosylglycohydrolase OM948_05365 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain OM948_05365 PF02951 Prokaryotic glutathione synthetase, N-terminal domain OM948_05370 PF00072 Response regulator receiver domain OM948_05375 PF00072 Response regulator receiver domain OM948_05380 PF01584 CheW-like domain OM948_05385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM948_05385 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term OM948_05390 PF00072 Response regulator receiver domain OM948_05390 PF02895 Signal transducing histidine kinase, homodimeric domain OM948_05390 PF01584 CheW-like domain OM948_05390 PF01627 Hpt domain OM948_05390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_05405 PF13302 Acetyltransferase (GNAT) domain OM948_05410 PF01112 Asparaginase OM948_05415 PF03932 CutC family OM948_05445 PF01301 Glycosyl hydrolases family 35 OM948_05450 PF07971 Glycosyl hydrolase family 92 OM948_05450 PF17678 Glycosyl hydrolase family 92 N-terminal domain OM948_05460 PF02056 Family 4 glycosyl hydrolase OM948_05460 PF11975 Family 4 glycosyl hydrolase C-terminal domain OM948_05470 PF13520 Amino acid permease OM948_05475 PF01301 Glycosyl hydrolases family 35 OM948_05485 PF14310 Fibronectin type III-like domain OM948_05485 PF01915 Glycosyl hydrolase family 3 C-terminal domain OM948_05485 PF00933 Glycosyl hydrolase family 3 N terminal domain OM948_05485 PF07691 PA14 domain OM948_05495 PF00728 Glycosyl hydrolase family 20, catalytic domain OM948_05495 PF02838 Glycosyl hydrolase family 20, domain 2 OM948_05495 PF07691 PA14 domain OM948_05500 PF00704 Glycosyl hydrolases family 18 OM948_05500 PF01476 LysM domain OM948_05515 PF02685 Glucokinase OM948_05520 PF04452 RNA methyltransferase OM948_05525 PF00202 Aminotransferase class-III OM948_05530 PF00293 NUDIX domain OM948_05535 PF00459 Inositol monophosphatase family OM948_05540 PF03819 MazG nucleotide pyrophosphohydrolase domain OM948_05545 PF02694 Uncharacterised BCR, YnfA/UPF0060 family OM948_05565 PF01571 Aminomethyltransferase folate-binding domain OM948_05565 PF08669 Glycine cleavage T-protein C-terminal barrel domain OM948_05570 PF01597 Glycine cleavage H-protein OM948_05600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OM948_05600 PF09317 Domain of unknown function (DUF1974) OM948_05600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OM948_05605 PF00561 alpha/beta hydrolase fold OM948_05610 PF00440 Bacterial regulatory proteins, tetR family OM948_05620 PF07715 TonB-dependent Receptor Plug Domain OM948_05620 PF00593 TonB dependent receptor OM948_05630 PF01430 Hsp33 protein OM948_05635 PF00912 Transglycosylase OM948_05640 PF00535 Glycosyl transferase family 2 OM948_05645 PF00478 IMP dehydrogenase / GMP reductase domain OM948_05645 PF00571 CBS domain OM948_05650 PF05170 AsmA family OM948_05655 PF03006 Haemolysin-III related OM948_05660 PF00009 Elongation factor Tu GTP binding domain OM948_05660 PF16658 Class II release factor RF3, C-terminal domain OM948_05665 PF01476 LysM domain OM948_05665 PF08525 Opacity-associated protein A N-terminal motif OM948_05665 PF01551 Peptidase family M23 OM948_05670 PF00561 alpha/beta hydrolase fold OM948_05675 PF01053 Cys/Met metabolism PLP-dependent enzyme OM948_05680 PF00742 Homoserine dehydrogenase OM948_05680 PF03447 Homoserine dehydrogenase, NAD binding domain OM948_05680 PF00696 Amino acid kinase family OM948_05685 PF12697 Alpha/beta hydrolase family OM948_05690 PF03313 Serine dehydratase alpha chain OM948_05690 PF03315 Serine dehydratase beta chain OM948_05710 PF04264 YceI-like domain OM948_05715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_05715 PF01627 Hpt domain OM948_05715 PF00072 Response regulator receiver domain OM948_05715 PF00512 His Kinase A (phospho-acceptor) domain OM948_05730 PF17149 Periplasmic sensor domain found in signal transduction proteins OM948_05730 PF00672 HAMP domain OM948_05730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_05730 PF00512 His Kinase A (phospho-acceptor) domain OM948_05730 PF01627 Hpt domain OM948_05730 PF00072 Response regulator receiver domain OM948_05735 PF07690 Major Facilitator Superfamily OM948_05740 PF01208 Uroporphyrinogen decarboxylase (URO-D) OM948_05750 PF01761 3-dehydroquinate synthase OM948_05755 PF01202 Shikimate kinase OM948_05760 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region OM948_05760 PF01243 Pyridoxamine 5'-phosphate oxidase OM948_05770 PF04012 PspA/IM30 family OM948_05795 PF03738 Glutathionylspermidine synthase preATP-grasp OM948_05805 PF07690 Major Facilitator Superfamily OM948_05810 PF09278 MerR, DNA binding OM948_05810 PF00376 MerR family regulatory protein OM948_05845 PF04820 Tryptophan halogenase OM948_05850 PF12706 Beta-lactamase superfamily domain OM948_05865 PF00872 Transposase, Mutator family OM948_05885 PF00324 Amino acid permease OM948_05890 PF00196 Bacterial regulatory proteins, luxR family OM948_05900 PF00561 alpha/beta hydrolase fold OM948_05910 PF00872 Transposase, Mutator family OM948_05920 PF00324 Amino acid permease OM948_05930 PF01654 Cytochrome bd terminal oxidase subunit I OM948_05935 PF02322 Cytochrome bd terminal oxidase subunit II OM948_05940 PF00756 Putative esterase OM948_05945 PF01769 Divalent cation transporter OM948_05945 PF03448 MgtE intracellular N domain OM948_05945 PF00571 CBS domain OM948_05950 PF05524 PEP-utilising enzyme, N-terminal OM948_05950 PF02896 PEP-utilising enzyme, TIM barrel domain OM948_05950 PF00391 PEP-utilising enzyme, mobile domain OM948_05955 PF00381 PTS HPr component phosphorylation site OM948_05965 PF03668 P-loop ATPase protein family OM948_05970 PF07475 HPr Serine kinase C-terminal domain OM948_05970 PF02603 HPr Serine kinase N terminus OM948_05975 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 OM948_05980 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein OM948_05985 PF00309 Sigma-54 factor, Activator interacting domain (AID) OM948_05985 PF04552 Sigma-54, DNA binding domain OM948_05985 PF04963 Sigma-54 factor, core binding domain OM948_05990 PF00005 ABC transporter OM948_05995 PF03968 OstA-like protein OM948_06010 PF00571 CBS domain OM948_06010 PF01380 SIS domain OM948_06015 PF01722 BolA-like protein OM948_06020 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) OM948_06040 PF00551 Formyl transferase OM948_06050 PF02769 AIR synthase related protein, C-terminal domain OM948_06050 PF00586 AIR synthase related protein, N-terminal domain OM948_06060 PF01594 AI-2E family transporter OM948_06065 PF00308 Bacterial dnaA protein OM948_06070 PF00483 Nucleotidyl transferase OM948_06075 PF01636 Phosphotransferase enzyme family OM948_06100 PF00667 FAD binding domain OM948_06100 PF00258 Flavodoxin OM948_06100 PF00175 Oxidoreductase NAD-binding domain OM948_06105 PF02424 ApbE family OM948_06130 PF18331 PKHD-type hydroxylase C-terminal domain OM948_06130 PF13640 2OG-Fe(II) oxygenase superfamily OM948_06140 PF00355 Rieske [2Fe-2S] domain OM948_06150 PF00266 Aminotransferase class-V OM948_06155 PF01458 Uncharacterized protein family (UPF0051) OM948_06160 PF00005 ABC transporter OM948_06165 PF01458 Uncharacterized protein family (UPF0051) OM948_06170 PF02082 Transcriptional regulator OM948_06180 PF01965 DJ-1/PfpI family OM948_06200 PF01551 Peptidase family M23 OM948_06210 PF03807 NADP oxidoreductase coenzyme F420-dependent OM948_06210 PF14748 Pyrroline-5-carboxylate reductase dimerisation OM948_06215 PF01168 Alanine racemase, N-terminal domain OM948_06220 PF00437 Type II/IV secretion system protein OM948_06225 PF00437 Type II/IV secretion system protein OM948_06240 PF00958 GMP synthase C terminal domain OM948_06240 PF00117 Glutamine amidotransferase class-I OM948_06240 PF13673 Acetyltransferase (GNAT) domain OM948_06240 PF13302 Acetyltransferase (GNAT) domain OM948_06240 PF03352 Methyladenine glycosylase OM948_06245 PF02622 Uncharacterized ACR, COG1678 OM948_06250 PF03652 Holliday junction resolvase OM948_06255 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OM948_06255 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OM948_06260 PF02566 OsmC-like protein OM948_06270 PF02567 Phenazine biosynthesis-like protein OM948_06275 PF02567 Phenazine biosynthesis-like protein OM948_06280 PF01842 ACT domain OM948_06280 PF00696 Amino acid kinase family OM948_06295 PF08245 Mur ligase middle domain OM948_06295 PF02875 Mur ligase family, glutamate ligase domain OM948_06310 PF00348 Polyprenyl synthetase OM948_06315 PF00436 Single-strand binding protein family OM948_06325 PF16197 Ketoacyl-synthetase C-terminal extension OM948_06325 PF08240 Alcohol dehydrogenase GroES-like domain OM948_06325 PF14765 Polyketide synthase dehydratase OM948_06325 PF00550 Phosphopantetheine attachment site OM948_06325 PF08659 KR domain OM948_06325 PF00698 Acyl transferase domain OM948_06325 PF00109 Beta-ketoacyl synthase, N-terminal domain OM948_06325 PF00107 Zinc-binding dehydrogenase OM948_06325 PF02801 Beta-ketoacyl synthase, C-terminal domain OM948_06330 PF00111 2Fe-2S iron-sulfur cluster binding domain OM948_06330 PF01799 [2Fe-2S] binding domain OM948_06330 PF10518 TAT (twin-arginine translocation) pathway signal sequence OM948_06335 PF03450 CO dehydrogenase flavoprotein C-terminal domain OM948_06335 PF00941 FAD binding domain in molybdopterin dehydrogenase OM948_06340 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain OM948_06340 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase OM948_06345 PF13478 XdhC Rossmann domain OM948_06345 PF02625 XdhC and CoxI family OM948_06380 PF04328 Selenoprotein, putative OM948_06385 PF02554 Carbon starvation protein CstA OM948_06385 PF13722 5TM C-terminal transporter carbon starvation CstA OM948_06390 PF05726 Pirin C-terminal cupin domain OM948_06390 PF02678 Pirin OM948_06405 PF02678 Pirin OM948_06405 PF05726 Pirin C-terminal cupin domain OM948_06415 PF04493 Endonuclease V OM948_06420 PF00300 Histidine phosphatase superfamily (branch 1) OM948_06430 PF01431 Peptidase family M13 OM948_06430 PF05649 Peptidase family M13 OM948_06435 PF13091 PLD-like domain OM948_06440 PF01339 CheB methylesterase OM948_06440 PF00072 Response regulator receiver domain OM948_06445 PF03705 CheR methyltransferase, all-alpha domain OM948_06445 PF01739 CheR methyltransferase, SAM binding domain OM948_06450 PF00990 Diguanylate cyclase, GGDEF domain OM948_06450 PF13426 PAS domain OM948_06450 PF00563 EAL domain OM948_06455 PF01584 CheW-like domain OM948_06460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM948_06460 PF02203 Tar ligand binding domain homologue OM948_06460 PF00672 HAMP domain OM948_06465 PF01627 Hpt domain OM948_06465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_06465 PF02895 Signal transducing histidine kinase, homodimeric domain OM948_06465 PF01584 CheW-like domain OM948_06465 PF09078 CheY binding OM948_06475 PF02559 CarD-like/TRCF domain OM948_06475 PF00270 DEAD/DEAH box helicase OM948_06475 PF00271 Helicase conserved C-terminal domain OM948_06475 PF03461 TRCF domain OM948_06475 PF17757 UvrB interaction domain OM948_06485 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ OM948_06490 PF00072 Response regulator receiver domain OM948_06490 PF00486 Transcriptional regulatory protein, C terminal OM948_06495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_06495 PF00512 His Kinase A (phospho-acceptor) domain OM948_06495 PF00672 HAMP domain OM948_06505 PF06123 Inner membrane protein CreD OM948_06530 PF00749 tRNA synthetases class I (E and Q), catalytic domain OM948_06535 PF01475 Ferric uptake regulator family OM948_06545 PF00529 HlyD membrane-fusion protein of T1SS OM948_06545 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OM948_06550 PF00873 AcrB/AcrD/AcrF family OM948_06555 PF02321 Outer membrane efflux protein OM948_06560 PF16859 Tetracyclin repressor-like, C-terminal domain OM948_06560 PF00440 Bacterial regulatory proteins, tetR family OM948_06570 PF12833 Helix-turn-helix domain OM948_06570 PF06719 AraC-type transcriptional regulator N-terminus OM948_06580 PF03466 LysR substrate binding domain OM948_06580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM948_06585 PF07690 Major Facilitator Superfamily OM948_06590 PF00248 Aldo/keto reductase family OM948_06600 PF01483 Proprotein convertase P-domain OM948_06600 PF00082 Subtilase family OM948_06625 PF03377 TAL effector repeat OM948_06635 PF13406 Transglycosylase SLT domain OM948_06650 PF00872 Transposase, Mutator family OM948_06660 PF00593 TonB dependent receptor OM948_06660 PF07715 TonB-dependent Receptor Plug Domain OM948_06680 PF08240 Alcohol dehydrogenase GroES-like domain OM948_06680 PF00107 Zinc-binding dehydrogenase OM948_06685 PF00654 Voltage gated chloride channel OM948_06695 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain OM948_06695 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain OM948_06700 PF00730 HhH-GPD superfamily base excision DNA repair protein OM948_06700 PF12833 Helix-turn-helix domain OM948_06700 PF06029 AlkA N-terminal domain OM948_06700 PF02805 Metal binding domain of Ada OM948_06740 PF04542 Sigma-70 region 2 OM948_06740 PF08281 Sigma-70, region 4 OM948_06745 PF00271 Helicase conserved C-terminal domain OM948_06745 PF03880 DbpA RNA binding domain OM948_06745 PF00270 DEAD/DEAH box helicase OM948_06750 PF00563 EAL domain OM948_06750 PF08448 PAS fold OM948_06750 PF00990 Diguanylate cyclase, GGDEF domain OM948_06755 PF00849 RNA pseudouridylate synthase OM948_06755 PF01479 S4 domain OM948_06760 PF00990 Diguanylate cyclase, GGDEF domain OM948_06775 PF03737 Aldolase/RraA OM948_06780 PF00144 Beta-lactamase OM948_06785 PF00999 Sodium/hydrogen exchanger family OM948_06790 PF00672 HAMP domain OM948_06790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_06790 PF00512 His Kinase A (phospho-acceptor) domain OM948_06795 PF00486 Transcriptional regulatory protein, C terminal OM948_06795 PF00072 Response regulator receiver domain OM948_06800 PF02321 Outer membrane efflux protein OM948_06815 PF00873 AcrB/AcrD/AcrF family OM948_06825 PF00005 ABC transporter OM948_06825 PF00664 ABC transporter transmembrane region OM948_06855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM948_06855 PF03466 LysR substrate binding domain OM948_06865 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD OM948_06870 PF04070 Domain of unknown function (DUF378) OM948_06910 PF00085 Thioredoxin OM948_06920 PF08264 Anticodon-binding domain of tRNA OM948_06920 PF13603 Leucyl-tRNA synthetase, Domain 2 OM948_06920 PF00133 tRNA synthetases class I (I, L, M and V) OM948_06935 PF01467 Cytidylyltransferase-like OM948_06950 PF02590 Predicted SPOUT methyltransferase OM948_06965 PF04402 Protein of unknown function (DUF541) OM948_06970 PF02545 Maf-like protein OM948_06975 PF10150 Ribonuclease E/G family OM948_06975 PF00575 S1 RNA binding domain OM948_06980 PF13502 AsmA-like C-terminal region OM948_06980 PF13116 Protein of unknown function OM948_06990 PF01523 Putative modulator of DNA gyrase OM948_06995 PF04751 Protein of unknown function (DUF615) OM948_07000 PF01523 Putative modulator of DNA gyrase OM948_07010 PF14521 Lysine-specific metallo-endopeptidase OM948_07015 PF00348 Polyprenyl synthetase OM948_07020 PF02609 Exonuclease VII small subunit OM948_07025 PF11734 TilS substrate C-terminal domain OM948_07025 PF01171 PP-loop family OM948_07025 PF09179 TilS substrate binding domain OM948_07030 PF00245 Alkaline phosphatase OM948_07035 PF00375 Sodium:dicarboxylate symporter family OM948_07050 PF00877 NlpC/P60 family OM948_07055 PF00877 NlpC/P60 family OM948_07060 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase OM948_07065 PF04235 Protein of unknown function (DUF418) OM948_07070 PF01266 FAD dependent oxidoreductase OM948_07075 PF07992 Pyridine nucleotide-disulphide oxidoreductase OM948_07075 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain OM948_07080 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain OM948_07095 PF05649 Peptidase family M13 OM948_07095 PF01431 Peptidase family M13 OM948_07100 PF05649 Peptidase family M13 OM948_07100 PF01431 Peptidase family M13 OM948_07115 PF00593 TonB dependent receptor OM948_07115 PF07715 TonB-dependent Receptor Plug Domain OM948_07120 PF10609 NUBPL iron-transfer P-loop NTPase OM948_07125 PF00692 dUTPase OM948_07145 PF01738 Dienelactone hydrolase family OM948_07155 PF01272 Transcription elongation factor, GreA/GreB, C-term OM948_07155 PF03449 Transcription elongation factor, N-terminal OM948_07170 PF00293 NUDIX domain OM948_07175 PF05872 Bacterial protein of unknown function (DUF853) OM948_07185 PF02666 Phosphatidylserine decarboxylase OM948_07190 PF02630 SCO1/SenC OM948_07195 PF05175 Methyltransferase small domain OM948_07200 PF01264 Chorismate synthase OM948_07205 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain OM948_07205 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain OM948_07210 PF01118 Semialdehyde dehydrogenase, NAD binding domain OM948_07210 PF02774 Semialdehyde dehydrogenase, dimerisation domain OM948_07225 PF01416 tRNA pseudouridine synthase OM948_07230 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase OM948_07235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM948_07235 PF03466 LysR substrate binding domain OM948_07240 PF00291 Pyridoxal-phosphate dependent enzyme OM948_07250 PF00290 Tryptophan synthase alpha chain OM948_07255 PF01039 Carboxyl transferase domain OM948_07255 PF17848 Acetyl-coA carboxylase zinc finger domain OM948_07260 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain OM948_07260 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I OM948_07260 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II OM948_07260 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III OM948_07290 PF00106 short chain dehydrogenase OM948_07295 PF00121 Triosephosphate isomerase OM948_07310 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 OM948_07315 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit OM948_07320 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit OM948_07325 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit OM948_07335 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit OM948_07335 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region OM948_07335 PF10531 SLBB domain OM948_07340 PF00384 Molybdopterin oxidoreductase OM948_07340 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region OM948_07340 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal OM948_07345 PF00146 NADH dehydrogenase OM948_07350 PF12838 4Fe-4S dicluster domain OM948_07355 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 OM948_07360 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L OM948_07365 PF00361 Proton-conducting membrane transporter OM948_07365 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus OM948_07370 PF00361 Proton-conducting membrane transporter OM948_07370 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus OM948_07375 PF00361 Proton-conducting membrane transporter OM948_07385 PF02576 RimP N-terminal domain OM948_07385 PF17384 RimP C-terminal SH3 domain OM948_07390 PF13184 NusA-like KH domain OM948_07390 PF08529 NusA N-terminal domain OM948_07390 PF00575 S1 RNA binding domain OM948_07395 PF00009 Elongation factor Tu GTP binding domain OM948_07395 PF11987 Translation-initiation factor 2 OM948_07395 PF08364 Bacterial translation initiation factor IF-2 associated region OM948_07395 PF04760 Translation initiation factor IF-2, N-terminal region OM948_07400 PF02033 Ribosome-binding factor A OM948_07405 PF09157 Pseudouridine synthase II TruB, C-terminal OM948_07405 PF16198 tRNA pseudouridylate synthase B C-terminal domain OM948_07405 PF01509 TruB family pseudouridylate synthase (N terminal domain) OM948_07410 PF00312 Ribosomal protein S15 OM948_07415 PF00575 S1 RNA binding domain OM948_07415 PF03725 3' exoribonuclease family, domain 2 OM948_07415 PF01138 3' exoribonuclease family, domain 1 OM948_07415 PF00013 KH domain OM948_07415 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain OM948_07425 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain OM948_07425 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain OM948_07435 PF00731 AIR carboxylase OM948_07440 PF02222 ATP-grasp domain OM948_07440 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain OM948_07445 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain OM948_07445 PF02777 Iron/manganese superoxide dismutases, C-terminal domain OM948_07450 PF00462 Glutaredoxin OM948_07460 PF01914 MarC family integral membrane protein OM948_07465 PF00593 TonB dependent receptor OM948_07470 PF03641 Possible lysine decarboxylase OM948_07470 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases OM948_07470 PF11892 Domain of unknown function (DUF3412) OM948_07475 PF07963 Prokaryotic N-terminal methylation motif OM948_07495 PF05567 Neisseria PilC beta-propeller domain OM948_07515 PF00872 Transposase, Mutator family OM948_07520 PF00271 Helicase conserved C-terminal domain OM948_07520 PF17757 UvrB interaction domain OM948_07520 PF12344 Ultra-violet resistance protein B OM948_07520 PF02151 UvrB/uvrC motif OM948_07520 PF04851 Type III restriction enzyme, res subunit OM948_07640 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system OM948_07650 PF00589 Phage integrase family OM948_07660 PF02534 Type IV secretory system Conjugative DNA transfer OM948_07680 PF03743 Bacterial conjugation TrbI-like protein OM948_07685 PF00437 Type II/IV secretion system protein OM948_07690 PF01464 Transglycosylase SLT domain OM948_07700 PF05101 Type IV secretory pathway, VirB3-like protein OM948_07705 PF03135 CagE, TrbE, VirB family, component of type IV transporter system OM948_07735 PF00128 Alpha amylase, catalytic domain OM948_07750 PF10566 Glycoside hydrolase 97 OM948_07750 PF14508 Glycosyl-hydrolase 97 N-terminal OM948_07750 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation OM948_07760 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 OM948_07765 PF00128 Alpha amylase, catalytic domain OM948_07765 PF00686 Starch binding domain OM948_07770 PF00356 Bacterial regulatory proteins, lacI family OM948_07775 PF03129 Anticodon binding domain OM948_07775 PF02824 TGS domain OM948_07775 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) OM948_07775 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain OM948_07780 PF00707 Translation initiation factor IF-3, C-terminal domain OM948_07780 PF05198 Translation initiation factor IF-3, N-terminal domain OM948_07785 PF01632 Ribosomal protein L35 OM948_07790 PF00453 Ribosomal protein L20 OM948_07795 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain OM948_07795 PF01409 tRNA synthetases class II core domain (F) OM948_07800 PF03483 B3/4 domain OM948_07800 PF03484 tRNA synthetase B5 domain OM948_07800 PF03147 Ferredoxin-fold anticodon binding domain OM948_07800 PF01588 Putative tRNA binding domain OM948_07800 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain OM948_07805 PF00216 Bacterial DNA-binding protein OM948_07810 PF13411 MerR HTH family regulatory protein OM948_07830 PF02397 Bacterial sugar transferase OM948_07850 PF13439 Glycosyltransferase Family 4 OM948_07850 PF00534 Glycosyl transferases group 1 OM948_07860 PF14667 Polysaccharide biosynthesis C-terminal domain OM948_07875 PF03808 Glycosyl transferase WecB/TagA/CpsF family OM948_07890 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III OM948_07890 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal OM948_07895 PF16123 Hydroxyacylglutathione hydrolase C-terminus OM948_07895 PF00753 Metallo-beta-lactamase superfamily OM948_07900 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family OM948_07920 PF13292 1-deoxy-D-xylulose-5-phosphate synthase OM948_07920 PF02779 Transketolase, pyrimidine binding domain OM948_07920 PF02780 Transketolase, C-terminal domain OM948_07930 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OM948_07930 PF02770 Acyl-CoA dehydrogenase, middle domain OM948_07930 PF12806 Acetyl-CoA dehydrogenase C-terminal like OM948_07930 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OM948_07940 PF08212 Lipocalin-like domain OM948_07970 PF00072 Response regulator receiver domain OM948_07970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_07970 PF13426 PAS domain OM948_07975 PF04362 Bacterial Fe(2+) trafficking OM948_07980 PF00633 Helix-hairpin-helix motif OM948_07980 PF00730 HhH-GPD superfamily base excision DNA repair protein OM948_07980 PF14815 NUDIX domain OM948_07980 PF10576 Iron-sulfur binding domain of endonuclease III OM948_07985 PF02881 SRP54-type protein, helical bundle domain OM948_07985 PF00448 SRP54-type protein, GTPase domain OM948_07995 PF05544 Proline racemase OM948_08000 PF01266 FAD dependent oxidoreductase OM948_08010 PF07992 Pyridine nucleotide-disulphide oxidoreductase OM948_08010 PF04324 BFD-like [2Fe-2S] binding domain OM948_08015 PF00701 Dihydrodipicolinate synthetase family OM948_08020 PF00171 Aldehyde dehydrogenase family OM948_08025 PF01321 Creatinase/Prolidase N-terminal domain OM948_08025 PF00557 Metallopeptidase family M24 OM948_08040 PF13520 Amino acid permease OM948_08065 PF00082 Subtilase family OM948_08065 PF09286 Pro-kumamolisin, activation domain OM948_08075 PF00593 TonB dependent receptor OM948_08075 PF07715 TonB-dependent Receptor Plug Domain OM948_08080 PF07532 Bacterial Ig-like domain (group 4) OM948_08085 PF04616 Glycosyl hydrolases family 43 OM948_08095 PF00593 TonB dependent receptor OM948_08095 PF07715 TonB-dependent Receptor Plug Domain OM948_08150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_08150 PF00183 Hsp90 protein OM948_08160 PF01467 Cytidylyltransferase-like OM948_08170 PF00037 4Fe-4S binding domain OM948_08180 PF00759 Glycosyl hydrolase family 9 OM948_08180 PF02927 Cellulase N-terminal ig-like domain OM948_08220 PF02547 Queuosine biosynthesis protein OM948_08225 PF01702 Queuine tRNA-ribosyltransferase OM948_08230 PF02699 Preprotein translocase subunit OM948_08235 PF13721 SecD export protein N-terminal TM region OM948_08235 PF02355 Protein export membrane protein OM948_08235 PF07549 SecD/SecF GG Motif OM948_08240 PF02355 Protein export membrane protein OM948_08240 PF07549 SecD/SecF GG Motif OM948_08275 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit OM948_08280 PF00294 pfkB family carbohydrate kinase OM948_08285 PF00391 PEP-utilising enzyme, mobile domain OM948_08285 PF05524 PEP-utilising enzyme, N-terminal OM948_08285 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 OM948_08285 PF02896 PEP-utilising enzyme, TIM barrel domain OM948_08285 PF00381 PTS HPr component phosphorylation site OM948_08290 PF00356 Bacterial regulatory proteins, lacI family OM948_08295 PF00873 AcrB/AcrD/AcrF family OM948_08300 PF00529 HlyD membrane-fusion protein of T1SS OM948_08300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OM948_08310 PF05088 Bacterial NAD-glutamate dehydrogenase OM948_08315 PF07690 Major Facilitator Superfamily OM948_08325 PF00072 Response regulator receiver domain OM948_08330 PF00072 Response regulator receiver domain OM948_08330 PF01627 Hpt domain OM948_08330 PF00512 His Kinase A (phospho-acceptor) domain OM948_08330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_08330 PF00672 HAMP domain OM948_08330 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) OM948_08360 PF02634 FdhD/NarQ family OM948_08365 PF00384 Molybdopterin oxidoreductase OM948_08375 PF07690 Major Facilitator Superfamily OM948_08375 PF00083 Sugar (and other) transporter OM948_08380 PF01814 Hemerythrin HHE cation binding domain OM948_08385 PF00072 Response regulator receiver domain OM948_08385 PF00990 Diguanylate cyclase, GGDEF domain OM948_08390 PF01266 FAD dependent oxidoreductase OM948_08395 PF00120 Glutamine synthetase, catalytic domain OM948_08405 PF00120 Glutamine synthetase, catalytic domain OM948_08410 PF00202 Aminotransferase class-III OM948_08415 PF13416 Bacterial extracellular solute-binding protein OM948_08420 PF13533 Biotin-lipoyl like OM948_08425 PF07690 Major Facilitator Superfamily OM948_08430 PF02321 Outer membrane efflux protein OM948_08435 PF08402 TOBE domain OM948_08435 PF00005 ABC transporter OM948_08445 PF00528 Binding-protein-dependent transport system inner membrane component OM948_08450 PF00528 Binding-protein-dependent transport system inner membrane component OM948_08455 PF00171 Aldehyde dehydrogenase family OM948_08470 PF03471 Transporter associated domain OM948_08470 PF00571 CBS domain OM948_08480 PF02130 Uncharacterized protein family UPF0054 OM948_08490 PF02562 PhoH-like protein OM948_08495 PF00919 Uncharacterized protein family UPF0004 OM948_08495 PF01938 TRAM domain OM948_08495 PF04055 Radical SAM superfamily OM948_08510 PF01464 Transglycosylase SLT domain OM948_08515 PF00355 Rieske [2Fe-2S] domain OM948_08515 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal OM948_08520 PF00032 Cytochrome b(C-terminal)/b6/petD OM948_08520 PF00033 Cytochrome b/b6/petB OM948_08525 PF02167 Cytochrome C1 family OM948_08530 PF02798 Glutathione S-transferase, N-terminal domain OM948_08530 PF00043 Glutathione S-transferase, C-terminal domain OM948_08535 PF04386 Stringent starvation protein B OM948_08555 PF00270 DEAD/DEAH box helicase OM948_08555 PF08494 DEAD/H associated OM948_08555 PF00271 Helicase conserved C-terminal domain OM948_08560 PF02245 Methylpurine-DNA glycosylase (MPG) OM948_08565 PF02743 Cache domain OM948_08565 PF00672 HAMP domain OM948_08565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM948_08570 PF01584 CheW-like domain OM948_08605 PF03837 RecT family OM948_08685 PF00772 DnaB-like helicase N terminal domain OM948_08685 PF03796 DnaB-like helicase C terminal domain OM948_08895 PF13356 Arm DNA-binding domain OM948_08895 PF00589 Phage integrase family OM948_08915 PF04679 ATP dependent DNA ligase C terminal region OM948_08915 PF01068 ATP dependent DNA ligase domain OM948_08915 PF13298 DNA polymerase Ligase (LigD) OM948_08920 PF01612 3'-5' exonuclease OM948_08920 PF00570 HRDC domain OM948_08930 PF03781 Sulfatase-modifying factor enzyme 1 OM948_08940 PF02601 Exonuclease VII, large subunit OM948_08940 PF13742 OB-fold nucleic acid binding domain OM948_08945 PF08331 Domain of unknown function (DUF1730) OM948_08950 PF01256 Carbohydrate kinase OM948_08950 PF03853 YjeF-related protein N-terminus OM948_08955 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE OM948_08960 PF01520 N-acetylmuramoyl-L-alanine amidase OM948_08960 PF11741 AMIN domain OM948_08965 PF01119 DNA mismatch repair protein, C-terminal domain OM948_08965 PF08676 MutL C terminal dimerisation domain OM948_08985 PF07879 PHB/PHA accumulation regulator DNA-binding domain OM948_08985 PF05233 PHB accumulation regulatory domain OM948_08990 PF00106 short chain dehydrogenase OM948_08995 PF00749 tRNA synthetases class I (E and Q), catalytic domain OM948_09000 PF01435 Peptidase family M48 OM948_09005 PF00563 EAL domain OM948_09005 PF00990 Diguanylate cyclase, GGDEF domain OM948_09005 PF00072 Response regulator receiver domain OM948_09015 PF07152 YaeQ protein OM948_09020 PF00313 'Cold-shock' DNA-binding domain OM948_09025 PF02798 Glutathione S-transferase, N-terminal domain OM948_09025 PF14497 Glutathione S-transferase, C-terminal domain OM948_09030 PF07859 alpha/beta hydrolase fold OM948_09035 PF02696 Uncharacterized ACR, YdiU/UPF0061 family OM948_09040 PF00156 Phosphoribosyl transferase domain OM948_09045 PF00271 Helicase conserved C-terminal domain OM948_09045 PF00270 DEAD/DEAH box helicase OM948_09045 PF03880 DbpA RNA binding domain OM948_09050 PF00005 ABC transporter OM948_09050 PF16326 ABC transporter C-terminal domain OM948_09050 PF12848 ABC transporter OM948_09060 PF00545 ribonuclease OM948_09065 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain OM948_09065 PF02777 Iron/manganese superoxide dismutases, C-terminal domain OM948_09070 PF00459 Inositol monophosphatase family OM948_09075 PF00588 SpoU rRNA Methylase family OM948_09085 PF03707 Bacterial signalling protein N terminal repeat OM948_09085 PF13188 PAS domain OM948_09085 PF00990 Diguanylate cyclase, GGDEF domain OM948_09085 PF00563 EAL domain OM948_09090 PF04055 Radical SAM superfamily OM948_09095 PF08207 Elongation factor P (EF-P) KOW-like domain OM948_09095 PF01132 Elongation factor P (EF-P) OB domain OM948_09095 PF09285 Elongation factor P, C-terminal OM948_09105 PF01979 Amidohydrolase family OM948_09115 PF13419 Haloacid dehalogenase-like hydrolase OM948_09125 PF00295 Glycosyl hydrolases family 28 OM948_09150 PF00753 Metallo-beta-lactamase superfamily OM948_09160 PF05985 Ethanolamine ammonia-lyase light chain (EutC) OM948_09165 PF06751 Ethanolamine ammonia lyase large subunit (EutB) OM948_09175 PF08460 Bacterial SH3 domain OM948_09175 PF01551 Peptidase family M23 OM948_09180 PF01979 Amidohydrolase family OM948_09185 PF01809 Putative membrane protein insertion efficiency factor OM948_09190 PF01258 Prokaryotic dksA/traR C4-type zinc finger OM948_09200 PF02657 Fe-S metabolism associated domain OM948_09205 PF01406 tRNA synthetases class I (C) catalytic domain OM948_09205 PF09190 DALR domain OM948_09215 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OM948_09215 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OM948_09220 PF00764 Arginosuccinate synthase OM948_09230 PF07687 Peptidase dimerisation domain OM948_09230 PF01546 Peptidase family M20/M25/M40 OM948_09235 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase OM948_09235 PF00696 Amino acid kinase family OM948_09245 PF01118 Semialdehyde dehydrogenase, NAD binding domain OM948_09250 PF00206 Lyase OM948_09260 PF01472 PUA domain OM948_09260 PF00696 Amino acid kinase family OM948_09265 PF00171 Aldehyde dehydrogenase family OM948_09275 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain OM948_09275 PF02129 X-Pro dipeptidyl-peptidase (S15 family) OM948_09305 PF00005 ABC transporter OM948_09305 PF00664 ABC transporter transmembrane region OM948_09310 PF00664 ABC transporter transmembrane region OM948_09310 PF00005 ABC transporter OM948_09315 PF00313 'Cold-shock' DNA-binding domain OM948_09320 PF00561 alpha/beta hydrolase fold OM948_09330 PF03918 Cytochrome C biogenesis protein OM948_09335 PF08534 Redoxin OM948_09340 PF01578 Cytochrome C assembly protein OM948_09340 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal OM948_09345 PF03100 CcmE OM948_09355 PF01578 Cytochrome C assembly protein OM948_09360 PF03379 CcmB protein OM948_09365 PF00005 ABC transporter OM948_09370 PF00155 Aminotransferase class I and II OM948_09375 PF00795 Carbon-nitrogen hydrolase OM948_09390 PF00849 RNA pseudouridylate synthase OM948_09390 PF01479 S4 domain OM948_09400 PF02616 Segregation and condensation protein ScpA OM948_09405 PF03795 YCII-related domain OM948_09415 PF00356 Bacterial regulatory proteins, lacI family OM948_09435 PF00528 Binding-protein-dependent transport system inner membrane component OM948_09440 PF00528 Binding-protein-dependent transport system inner membrane component OM948_09465 PF00795 Carbon-nitrogen hydrolase OM948_09470 PF04371 Porphyromonas-type peptidyl-arginine deiminase OM948_09480 PF00444 Ribosomal protein L36 OM948_09485 PF02224 Cytidylate kinase OM948_09490 PF02224 Cytidylate kinase OM948_09500 PF00216 Bacterial DNA-binding protein OM948_09510 PF18073 Rubredoxin metal binding domain OM948_09515 PF00953 Glycosyl transferase family 4 OM948_09520 PF02719 Polysaccharide biosynthesis protein OM948_09525 PF00483 Nucleotidyl transferase OM948_09530 PF02254 TrkA-N domain OM948_09530 PF00999 Sodium/hydrogen exchanger family OM948_09540 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain OM948_09540 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain OM948_09545 PF00478 IMP dehydrogenase / GMP reductase domain OM948_09545 PF00571 CBS domain OM948_09550 PF00958 GMP synthase C terminal domain OM948_09550 PF00117 Glutamine amidotransferase class-I OM948_09550 PF02540 NAD synthase OM948_09555 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) OM948_09560 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus OM948_09560 PF00361 Proton-conducting membrane transporter OM948_09560 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus OM948_09565 PF03466 LysR substrate binding domain OM948_09565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM948_09580 PF00196 Bacterial regulatory proteins, luxR family OM948_09580 PF00072 Response regulator receiver domain OM948_09595 PF12833 Helix-turn-helix domain OM948_09600 PF00857 Isochorismatase family OM948_09610 PF07969 Amidohydrolase family OM948_09615 PF05977 Transmembrane secretion effector OM948_09630 PF10414 Sirohaem synthase dimerisation region OM948_09630 PF14824 Sirohaem biosynthesis protein central OM948_09630 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases OM948_09645 PF05974 Domain of unknown function (DUF892) OM948_09665 PF00990 Diguanylate cyclase, GGDEF domain OM948_09665 PF00563 EAL domain OM948_09665 PF08448 PAS fold OM948_09665 PF08447 PAS fold OM948_09670 PF12951 Passenger-associated-transport-repeat OM948_09675 PF00196 Bacterial regulatory proteins, luxR family OM948_09675 PF00072 Response regulator receiver domain OM948_09680 PF00072 Response regulator receiver domain OM948_09680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_09680 PF00512 His Kinase A (phospho-acceptor) domain OM948_09680 PF08448 PAS fold OM948_09680 PF13426 PAS domain OM948_09690 PF00873 AcrB/AcrD/AcrF family OM948_09695 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OM948_09700 PF03797 Autotransporter beta-domain OM948_09700 PF00082 Subtilase family OM948_09715 PF07694 5TMR of 5TMR-LYT OM948_09715 PF13492 GAF domain OM948_09715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_09715 PF06580 Histidine kinase OM948_09720 PF04397 LytTr DNA-binding domain OM948_09720 PF00072 Response regulator receiver domain OM948_09730 PF00144 Beta-lactamase OM948_09740 PF07995 Glucose / Sorbosone dehydrogenase OM948_09745 PF01408 Oxidoreductase family, NAD-binding Rossmann fold OM948_09755 PF09335 SNARE associated Golgi protein OM948_09760 PF01494 FAD binding domain OM948_09765 PF13581 Histidine kinase-like ATPase domain OM948_09765 PF07536 HWE histidine kinase OM948_09765 PF13426 PAS domain OM948_09780 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath OM948_09795 PF05114 Protein of unknown function (DUF692) OM948_09820 PF13406 Transglycosylase SLT domain OM948_09830 PF03377 TAL effector repeat OM948_09860 PF00106 short chain dehydrogenase OM948_09865 PF05199 GMC oxidoreductase OM948_09865 PF00732 GMC oxidoreductase OM948_09870 PF12697 Alpha/beta hydrolase family OM948_09870 PF08241 Methyltransferase domain OM948_09915 PF01106 NifU-like domain OM948_09920 PF01329 Pterin 4 alpha carbinolamine dehydratase OM948_09930 PF02535 ZIP Zinc transporter OM948_09935 PF11737 Protein of unknown function (DUF3300) OM948_09940 PF01479 S4 domain OM948_09940 PF00849 RNA pseudouridylate synthase OM948_09945 PF10150 Ribonuclease E/G family OM948_09945 PF00575 S1 RNA binding domain OM948_09945 PF12111 Polyribonucleotide phosphorylase C terminal OM948_09950 PF00196 Bacterial regulatory proteins, luxR family OM948_09950 PF00072 Response regulator receiver domain OM948_09955 PF00581 Rhodanese-like domain OM948_09955 PF17773 UPF0176 acylphosphatase like domain OM948_09965 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase OM948_09975 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain OM948_09975 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain OM948_09975 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain OM948_10000 PF01066 CDP-alcohol phosphatidyltransferase OM948_10005 PF01541 GIY-YIG catalytic domain OM948_10005 PF02151 UvrB/uvrC motif OM948_10005 PF08459 UvrC Helix-hairpin-helix N-terminal OM948_10015 PF01451 Low molecular weight phosphotyrosine protein phosphatase OM948_10020 PF02348 Cytidylyltransferase OM948_10025 PF02606 Tetraacyldisaccharide-1-P 4'-kinase OM948_10030 PF00005 ABC transporter OM948_10030 PF00664 ABC transporter transmembrane region OM948_10035 PF02472 Biopolymer transport protein ExbD/TolR OM948_10040 PF01618 MotA/TolQ/ExbB proton channel family OM948_10045 PF03772 Competence protein OM948_10045 PF00753 Metallo-beta-lactamase superfamily OM948_10055 PF00005 ABC transporter OM948_10060 PF02687 FtsX-like permease family OM948_10060 PF12704 MacB-like periplasmic core domain OM948_10070 PF03937 Flavinator of succinate dehydrogenase OM948_10075 PF13085 2Fe-2S iron-sulfur cluster binding domain OM948_10085 PF00890 FAD binding domain OM948_10085 PF02910 Fumarate reductase flavoprotein C-term OM948_10090 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit OM948_10095 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit OM948_10115 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain OM948_10115 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain OM948_10125 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase OM948_10130 PF00920 Dehydratase family OM948_10135 PF01081 KDPG and KHG aldolase OM948_10140 PF00873 AcrB/AcrD/AcrF family OM948_10145 PF00873 AcrB/AcrD/AcrF family OM948_10150 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OM948_10160 PF00034 Cytochrome c OM948_10200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_10200 PF00512 His Kinase A (phospho-acceptor) domain OM948_10200 PF09308 LuxQ, periplasmic OM948_10200 PF00072 Response regulator receiver domain OM948_10205 PF00575 S1 RNA binding domain OM948_10205 PF16921 Tex protein YqgF-like domain OM948_10205 PF09371 Tex-like protein N-terminal domain OM948_10205 PF17674 HHH domain OM948_10215 PF00355 Rieske [2Fe-2S] domain OM948_10215 PF01266 FAD dependent oxidoreductase OM948_10230 PF00561 alpha/beta hydrolase fold OM948_10240 PF01066 CDP-alcohol phosphatidyltransferase OM948_10260 PF03618 Kinase/pyrophosphorylase OM948_10265 PF00391 PEP-utilising enzyme, mobile domain OM948_10265 PF02896 PEP-utilising enzyme, TIM barrel domain OM948_10265 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain OM948_10270 PF05552 Conserved TM helix OM948_10270 PF00924 Mechanosensitive ion channel OM948_10275 PF00929 Exonuclease OM948_10280 PF14437 MafB19-like deaminase OM948_10285 PF02742 Iron dependent repressor, metal binding and dimerisation domain OM948_10285 PF01325 Iron dependent repressor, N-terminal DNA binding domain OM948_10290 PF01566 Natural resistance-associated macrophage protein OM948_10295 PF00561 alpha/beta hydrolase fold OM948_10320 PF12804 MobA-like NTP transferase domain OM948_10325 PF00994 Probable molybdopterin binding domain OM948_10325 PF03454 MoeA C-terminal region (domain IV) OM948_10325 PF03453 MoeA N-terminal region (domain I and II) OM948_10335 PF03372 Endonuclease/Exonuclease/phosphatase family OM948_10345 PF00107 Zinc-binding dehydrogenase OM948_10345 PF13823 Alcohol dehydrogenase GroES-associated OM948_10345 PF08240 Alcohol dehydrogenase GroES-like domain OM948_10380 PF00899 ThiF family OM948_10395 PF01011 PQQ enzyme repeat OM948_10395 PF13360 PQQ-like domain OM948_10405 PF13464 Domain of unknown function (DUF4115) OM948_10415 PF04055 Radical SAM superfamily OM948_10420 PF00334 Nucleoside diphosphate kinase OM948_10430 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain OM948_10430 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain OM948_10430 PF00378 Enoyl-CoA hydratase/isomerase OM948_10435 PF00108 Thiolase, N-terminal domain OM948_10435 PF02803 Thiolase, C-terminal domain OM948_10440 PF02537 CrcB-like protein, Camphor Resistance (CrcB) OM948_10445 PF12002 MgsA AAA+ ATPase C terminal OM948_10445 PF00004 ATPase family associated with various cellular activities (AAA) OM948_10445 PF16193 AAA C-terminal domain OM948_10455 PF03548 Outer membrane lipoprotein carrier protein LolA OM948_10465 PF13491 4TM region of DNA translocase FtsK/SpoIIIE OM948_10465 PF17854 FtsK alpha domain OM948_10465 PF09397 Ftsk gamma domain OM948_10465 PF01580 FtsK/SpoIIIE family OM948_10470 PF07992 Pyridine nucleotide-disulphide oxidoreductase OM948_10480 PF03588 Leucyl/phenylalanyl-tRNA protein transferase OM948_10485 PF01176 Translation initiation factor 1A / IF-1 OM948_10490 PF10431 C-terminal, D2-small domain, of ClpB protein OM948_10490 PF00004 ATPase family associated with various cellular activities (AAA) OM948_10490 PF07724 AAA domain (Cdc48 subfamily) OM948_10490 PF17871 AAA lid domain OM948_10490 PF02861 Clp amino terminal domain, pathogenicity island component OM948_10495 PF02617 ATP-dependent Clp protease adaptor protein ClpS OM948_10500 PF00293 NUDIX domain OM948_10510 PF04356 Protein of unknown function (DUF489) OM948_10515 PF12729 Four helix bundle sensory module for signal transduction OM948_10515 PF00672 HAMP domain OM948_10515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM948_10525 PF03707 Bacterial signalling protein N terminal repeat OM948_10525 PF00563 EAL domain OM948_10525 PF00990 Diguanylate cyclase, GGDEF domain OM948_10530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_10530 PF07730 Histidine kinase OM948_10535 PF00563 EAL domain OM948_10535 PF00990 Diguanylate cyclase, GGDEF domain OM948_10535 PF03707 Bacterial signalling protein N terminal repeat OM948_10540 PF13426 PAS domain OM948_10540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_10540 PF00512 His Kinase A (phospho-acceptor) domain OM948_10540 PF00989 PAS fold OM948_10540 PF13188 PAS domain OM948_10565 PF01584 CheW-like domain OM948_10565 PF00072 Response regulator receiver domain OM948_10575 PF06429 Flagellar basal body rod FlgEFG protein C-terminal OM948_10575 PF00460 Flagella basal body rod protein OM948_10580 PF03963 Flagellar hook capping protein - N-terminal region OM948_10585 PF07559 Flagellar basal body protein FlaE OM948_10585 PF00460 Flagella basal body rod protein OM948_10585 PF06429 Flagellar basal body rod FlgEFG protein C-terminal OM948_10590 PF00460 Flagella basal body rod protein OM948_10590 PF06429 Flagellar basal body rod FlgEFG protein C-terminal OM948_10595 PF00460 Flagella basal body rod protein OM948_10595 PF06429 Flagellar basal body rod FlgEFG protein C-terminal OM948_10600 PF02107 Flagellar L-ring protein OM948_10605 PF02119 Flagellar P-ring protein OM948_10610 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase OM948_10610 PF10135 Rod binding protein OM948_10615 PF07196 Flagellin hook IN motif OM948_10615 PF06429 Flagellar basal body rod FlgEFG protein C-terminal OM948_10620 PF00700 Bacterial flagellin C-terminal helical region OM948_10620 PF00669 Bacterial flagellin N-terminal helical region OM948_10625 PF00669 Bacterial flagellin N-terminal helical region OM948_10625 PF00700 Bacterial flagellin C-terminal helical region OM948_10635 PF07196 Flagellin hook IN motif OM948_10635 PF07195 Flagellar hook-associated protein 2 C-terminus OM948_10635 PF02465 Flagellar hook-associated protein 2 N-terminus OM948_10640 PF02561 Flagellar protein FliS OM948_10655 PF00196 Bacterial regulatory proteins, luxR family OM948_10655 PF00072 Response regulator receiver domain OM948_10660 PF00309 Sigma-54 factor, Activator interacting domain (AID) OM948_10660 PF04552 Sigma-54, DNA binding domain OM948_10660 PF04963 Sigma-54 factor, core binding domain OM948_10665 PF01339 CheB methylesterase OM948_10665 PF00072 Response regulator receiver domain OM948_10670 PF06490 Flagellar regulatory protein FleQ OM948_10670 PF02954 Bacterial regulatory protein, Fis family OM948_10670 PF00158 Sigma-54 interaction domain OM948_10675 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family OM948_10685 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal OM948_10685 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III OM948_10720 PF04230 Polysaccharide pyruvyl transferase OM948_10725 PF00535 Glycosyl transferase family 2 OM948_10725 PF00534 Glycosyl transferases group 1 OM948_10730 PF02049 Flagellar hook-basal body complex protein FliE OM948_10735 PF08345 Flagellar M-ring protein C-terminal OM948_10735 PF01514 Secretory protein of YscJ/FliF family OM948_10740 PF14841 FliG middle domain OM948_10740 PF01706 FliG C-terminal domain OM948_10740 PF14842 FliG N-terminal domain OM948_10750 PF18269 T3SS EscN ATPase C-terminal domain OM948_10750 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain OM948_10770 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term OM948_10770 PF02154 Flagellar motor switch protein FliM OM948_10775 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term OM948_10780 PF04347 Flagellar biosynthesis protein, FliO OM948_10785 PF00813 FliP family OM948_10790 PF01313 Bacterial export proteins, family 3 OM948_10795 PF01311 Bacterial export proteins, family 1 OM948_10805 PF00990 Diguanylate cyclase, GGDEF domain OM948_10810 PF00563 EAL domain OM948_10810 PF00990 Diguanylate cyclase, GGDEF domain OM948_10810 PF03707 Bacterial signalling protein N terminal repeat OM948_10815 PF01312 FlhB HrpN YscU SpaS Family OM948_10820 PF00771 FHIPEP family OM948_10825 PF00448 SRP54-type protein, GTPase domain OM948_10830 PF10609 NUBPL iron-transfer P-loop NTPase OM948_10835 PF04545 Sigma-70, region 4 OM948_10835 PF04542 Sigma-70 region 2 OM948_10835 PF04539 Sigma-70 region 3 OM948_10840 PF00072 Response regulator receiver domain OM948_10845 PF04344 Chemotaxis phosphatase, CheZ OM948_10850 PF01584 CheW-like domain OM948_10850 PF02895 Signal transducing histidine kinase, homodimeric domain OM948_10850 PF00072 Response regulator receiver domain OM948_10850 PF01627 Hpt domain OM948_10850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_10905 PF00872 Transposase, Mutator family OM948_10920 PF13614 AAA domain OM948_10935 PF01618 MotA/TolQ/ExbB proton channel family OM948_10940 PF13677 Membrane MotB of proton-channel complex MotA/MotB OM948_10940 PF00691 OmpA family OM948_10945 PF13614 AAA domain OM948_10960 PF00072 Response regulator receiver domain OM948_10965 PF02895 Signal transducing histidine kinase, homodimeric domain OM948_10965 PF09078 CheY binding OM948_10965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_10965 PF01627 Hpt domain OM948_10965 PF01584 CheW-like domain OM948_10970 PF00672 HAMP domain OM948_10970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM948_10970 PF02203 Tar ligand binding domain homologue OM948_10980 PF08269 Cache domain OM948_10980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM948_10985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM948_10985 PF02203 Tar ligand binding domain homologue OM948_10985 PF00672 HAMP domain OM948_10995 PF00672 HAMP domain OM948_10995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM948_10995 PF02203 Tar ligand binding domain homologue OM948_11000 PF00672 HAMP domain OM948_11000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM948_11000 PF02203 Tar ligand binding domain homologue OM948_11005 PF00672 HAMP domain OM948_11005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM948_11005 PF02203 Tar ligand binding domain homologue OM948_11010 PF00672 HAMP domain OM948_11010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM948_11010 PF02203 Tar ligand binding domain homologue OM948_11020 PF00672 HAMP domain OM948_11020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM948_11020 PF02203 Tar ligand binding domain homologue OM948_11025 PF00672 HAMP domain OM948_11025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM948_11025 PF02203 Tar ligand binding domain homologue OM948_11030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM948_11030 PF00672 HAMP domain OM948_11030 PF02203 Tar ligand binding domain homologue OM948_11035 PF00672 HAMP domain OM948_11035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM948_11035 PF02203 Tar ligand binding domain homologue OM948_11050 PF07317 Flagellar regulator YcgR OM948_11050 PF07238 PilZ domain OM948_11055 PF01584 CheW-like domain OM948_11070 PF02203 Tar ligand binding domain homologue OM948_11070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM948_11070 PF00672 HAMP domain OM948_11075 PF03705 CheR methyltransferase, all-alpha domain OM948_11075 PF01739 CheR methyltransferase, SAM binding domain OM948_11080 PF03975 CheD chemotactic sensory transduction OM948_11085 PF00072 Response regulator receiver domain OM948_11085 PF01339 CheB methylesterase OM948_11090 PF03707 Bacterial signalling protein N terminal repeat OM948_11090 PF00990 Diguanylate cyclase, GGDEF domain OM948_11090 PF00563 EAL domain OM948_11095 PF00561 alpha/beta hydrolase fold OM948_11100 PF06434 Aconitate hydratase 2 N-terminus OM948_11100 PF11791 Aconitate B N-terminal domain OM948_11100 PF00330 Aconitase family (aconitate hydratase) OM948_11125 PF00501 AMP-binding enzyme OM948_11125 PF13193 AMP-binding enzyme C-terminal domain OM948_11130 PF00378 Enoyl-CoA hydratase/isomerase OM948_11135 PF00072 Response regulator receiver domain OM948_11135 PF01627 Hpt domain OM948_11135 PF00512 His Kinase A (phospho-acceptor) domain OM948_11135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_11140 PF00512 His Kinase A (phospho-acceptor) domain OM948_11140 PF01627 Hpt domain OM948_11140 PF00072 Response regulator receiver domain OM948_11140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_11145 PF00072 Response regulator receiver domain OM948_11150 PF00152 tRNA synthetases class II (D, K and N) OM948_11150 PF01336 OB-fold nucleic acid binding domain OM948_11160 PF04397 LytTr DNA-binding domain OM948_11160 PF00072 Response regulator receiver domain OM948_11170 PF01368 DHH family OM948_11170 PF17768 RecJ OB domain OM948_11170 PF02272 DHHA1 domain OM948_11180 PF03449 Transcription elongation factor, N-terminal OM948_11180 PF01272 Transcription elongation factor, GreA/GreB, C-term OM948_11185 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain OM948_11185 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain OM948_11185 PF02142 MGS-like domain OM948_11195 PF00117 Glutamine amidotransferase class-I OM948_11195 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain OM948_11200 PF01113 Dihydrodipicolinate reductase, N-terminus OM948_11200 PF05173 Dihydrodipicolinate reductase, C-terminus OM948_11210 PF00155 Aminotransferase class I and II OM948_11225 PF02421 Ferrous iron transport protein B OM948_11225 PF07670 Nucleoside recognition OM948_11225 PF07664 Ferrous iron transport protein B C terminus OM948_11235 PF00378 Enoyl-CoA hydratase/isomerase OM948_11245 PF00682 HMGL-like OM948_11250 PF00106 short chain dehydrogenase OM948_11255 PF01132 Elongation factor P (EF-P) OB domain OM948_11255 PF08207 Elongation factor P (EF-P) KOW-like domain OM948_11255 PF09285 Elongation factor P, C-terminal OM948_11275 PF02913 FAD linked oxidases, C-terminal domain OM948_11275 PF01565 FAD binding domain OM948_11280 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain OM948_11280 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain OM948_11290 PF13520 Amino acid permease OM948_11295 PF13520 Amino acid permease OM948_11300 PF00596 Class II Aldolase and Adducin N-terminal domain OM948_11305 PF03079 ARD/ARD' family OM948_11325 PF01502 Phosphoribosyl-AMP cyclohydrolase OM948_11325 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase OM948_11335 PF00977 Histidine biosynthesis protein OM948_11340 PF00977 Histidine biosynthesis protein OM948_11345 PF00117 Glutamine amidotransferase class-I OM948_11350 PF00475 Imidazoleglycerol-phosphate dehydratase OM948_11355 PF00155 Aminotransferase class I and II OM948_11360 PF00815 Histidinol dehydrogenase OM948_11365 PF08029 HisG, C-terminal domain OM948_11365 PF01634 ATP phosphoribosyltransferase OM948_11375 PF03129 Anticodon binding domain OM948_11375 PF13393 Histidyl-tRNA synthetase OM948_11380 PF00027 Cyclic nucleotide-binding domain OM948_11380 PF13545 Crp-like helix-turn-helix domain OM948_11390 PF00291 Pyridoxal-phosphate dependent enzyme OM948_11390 PF14821 Threonine synthase N terminus OM948_11400 PF00288 GHMP kinases N terminal domain OM948_11400 PF08544 GHMP kinases C terminal OM948_11405 PF00742 Homoserine dehydrogenase OM948_11405 PF03447 Homoserine dehydrogenase, NAD binding domain OM948_11405 PF00696 Amino acid kinase family OM948_11405 PF01842 ACT domain OM948_11405 PF13840 ACT domain OM948_11430 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain OM948_11430 PF13018 Extended Signal Peptide of Type V secretion system OM948_11430 PF05594 Haemagluttinin repeat OM948_11430 PF13332 Hemagglutinin repeat OM948_11430 PF05860 haemagglutination activity domain OM948_11445 PF14883 Hypothetical glycosyl hydrolase family 13 OM948_11445 PF01522 Polysaccharide deacetylase OM948_11450 PF00535 Glycosyl transferase family 2 OM948_11490 PF00171 Aldehyde dehydrogenase family OM948_11510 PF01180 Dihydroorotate dehydrogenase OM948_11515 PF01565 FAD binding domain OM948_11515 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain OM948_11520 PF00892 EamA-like transporter family OM948_11525 PF01177 Asp/Glu/Hydantoin racemase OM948_11540 PF01569 PAP2 superfamily OM948_11545 PF04551 GcpE protein OM948_11555 PF00072 Response regulator receiver domain OM948_11560 PF02013 Cellulose or protein binding domain OM948_11560 PF00150 Cellulase (glycosyl hydrolase family 5) OM948_11565 PF00563 EAL domain OM948_11565 PF01590 GAF domain OM948_11565 PF00990 Diguanylate cyclase, GGDEF domain OM948_11565 PF00360 Phytochrome region OM948_11570 PF00474 Sodium:solute symporter family OM948_11575 PF14310 Fibronectin type III-like domain OM948_11575 PF00933 Glycosyl hydrolase family 3 N terminal domain OM948_11575 PF01915 Glycosyl hydrolase family 3 C-terminal domain OM948_11595 PF00342 Phosphoglucose isomerase OM948_11600 PF02261 Aspartate decarboxylase OM948_11605 PF02569 Pantoate-beta-alanine ligase OM948_11610 PF02548 Ketopantoate hydroxymethyltransferase OM948_11615 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) OM948_11620 PF01743 Poly A polymerase head domain OM948_11620 PF12626 Polymerase A arginine-rich C-terminus OM948_11620 PF12627 Probable RNA and SrmB- binding site of polymerase A OM948_11630 PF02649 Type I GTP cyclohydrolase folE2 OM948_11635 PF01520 N-acetylmuramoyl-L-alanine amidase OM948_11650 PF00083 Sugar (and other) transporter OM948_11660 PF02782 FGGY family of carbohydrate kinases, C-terminal domain OM948_11660 PF00370 FGGY family of carbohydrate kinases, N-terminal domain OM948_11670 PF01055 Glycosyl hydrolases family 31 OM948_11670 PF17137 Domain of unknown function (DUF5110) OM948_11670 PF16338 Domain of unknown function (DUF4968) OM948_11675 PF08532 Beta-galactosidase trimerisation domain OM948_11675 PF02449 Beta-galactosidase OM948_11675 PF08533 Beta-galactosidase C-terminal domain OM948_11685 PF03442 Carbohydrate binding domain X2 OM948_11685 PF00942 Cellulose binding domain OM948_11700 PF03466 LysR substrate binding domain OM948_11700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM948_11705 PF01081 KDPG and KHG aldolase OM948_11710 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain OM948_11710 PF13378 Enolase C-terminal domain-like OM948_11715 PF08450 SMP-30/Gluconolactonase/LRE-like region OM948_11720 PF05035 2-keto-3-deoxy-galactonokinase OM948_11725 PF11953 Domain of unknown function (DUF3470) OM948_11725 PF00037 4Fe-4S binding domain OM948_11735 PF00701 Dihydrodipicolinate synthetase family OM948_11750 PF00578 AhpC/TSA family OM948_11755 PF02562 PhoH-like protein OM948_11755 PF13638 PIN domain OM948_11770 PF08543 Phosphomethylpyrimidine kinase OM948_11795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM948_11795 PF03466 LysR substrate binding domain OM948_11800 PF02678 Pirin OM948_11800 PF17954 Quercetinase C-terminal cupin domain OM948_11805 PF13426 PAS domain OM948_11805 PF08447 PAS fold OM948_11805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM948_11820 PF02599 Global regulator protein family OM948_11825 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain OM948_11825 PF01411 tRNA synthetases class II (A) OM948_11825 PF02272 DHHA1 domain OM948_11830 PF02631 RecX family OM948_11835 PF00154 recA bacterial DNA recombination protein OM948_11840 PF01726 LexA DNA binding domain OM948_11840 PF00717 Peptidase S24-like OM948_11845 PF03109 ABC1 family OM948_11850 PF02464 Competence-damaged protein OM948_11855 PF16360 GTP-binding GTPase Middle Region OM948_11855 PF13167 GTP-binding GTPase N-terminal OM948_11855 PF01926 50S ribosome-binding GTPase OM948_11860 PF17209 Hfq protein OM948_11870 PF00809 Pterin binding enzyme OM948_11875 PF00004 ATPase family associated with various cellular activities (AAA) OM948_11875 PF17862 AAA+ lid domain OM948_11875 PF06480 FtsH Extracellular OM948_11875 PF01434 Peptidase family M41 OM948_11880 PF01728 FtsJ-like methyltransferase OM948_11885 PF01985 CRS1 / YhbY (CRM) domain OM948_11890 PF04430 Protein of unknown function (DUF498/DUF598) OM948_11895 PF01551 Peptidase family M23 OM948_11895 PF01476 LysM domain OM948_11900 PF09335 SNARE associated Golgi protein OM948_11910 PF01975 Survival protein SurE OM948_11915 PF01713 Smr domain OM948_11920 PF01142 tRNA pseudouridine synthase D (TruD) OM948_11925 PF02542 YgbB family OM948_11930 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OM948_11935 PF04977 Septum formation initiator OM948_11940 PF03952 Enolase, N-terminal domain OM948_11940 PF00113 Enolase, C-terminal TIM barrel domain OM948_11950 PF00793 DAHP synthetase I family OM948_11955 PF06418 CTP synthase N-terminus OM948_11955 PF00117 Glutamine amidotransferase class-I OM948_11965 PF00204 DNA gyrase B OM948_11965 PF00986 DNA gyrase B subunit, carboxyl terminus OM948_11965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_11965 PF01751 Toprim domain OM948_11980 PF01384 Phosphate transporter family OM948_11990 PF00571 CBS domain OM948_11990 PF03471 Transporter associated domain OM948_11990 PF01595 Cyclin M transmembrane N-terminal domain OM948_12005 PF00296 Luciferase-like monooxygenase OM948_12010 PF07690 Major Facilitator Superfamily OM948_12015 PF00664 ABC transporter transmembrane region OM948_12015 PF00005 ABC transporter OM948_12020 PF00005 ABC transporter OM948_12055 PF08241 Methyltransferase domain OM948_12070 PF00535 Glycosyl transferase family 2 OM948_12075 PF01943 Polysaccharide biosynthesis protein OM948_12080 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family OM948_12100 PF05523 WxcM-like, C-terminal OM948_12115 PF00034 Cytochrome c OM948_12125 PF04542 Sigma-70 region 2 OM948_12125 PF08281 Sigma-70, region 4 OM948_12135 PF00082 Subtilase family OM948_12140 PF01578 Cytochrome C assembly protein OM948_12145 PF04995 Heme exporter protein D (CcmD) OM948_12150 PF03100 CcmE OM948_12155 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal OM948_12155 PF01578 Cytochrome C assembly protein OM948_12160 PF08534 Redoxin OM948_12165 PF03918 Cytochrome C biogenesis protein OM948_12175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_12175 PF13426 PAS domain OM948_12175 PF00072 Response regulator receiver domain OM948_12180 PF06745 KaiC OM948_12185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_12185 PF00072 Response regulator receiver domain OM948_12185 PF00672 HAMP domain OM948_12185 PF01627 Hpt domain OM948_12185 PF00512 His Kinase A (phospho-acceptor) domain OM948_12185 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) OM948_12190 PF00072 Response regulator receiver domain OM948_12190 PF13188 PAS domain OM948_12190 PF08448 PAS fold OM948_12190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_12190 PF00512 His Kinase A (phospho-acceptor) domain OM948_12200 PF01494 FAD binding domain OM948_12205 PF00672 HAMP domain OM948_12205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM948_12205 PF02203 Tar ligand binding domain homologue OM948_12220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM948_12220 PF03466 LysR substrate binding domain OM948_12225 PF02525 Flavodoxin-like fold OM948_12230 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) OM948_12230 PF02403 Seryl-tRNA synthetase N-terminal domain OM948_12235 PF03544 Gram-negative bacterial TonB protein C-terminal OM948_12245 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) OM948_12250 PF00800 Prephenate dehydratase OM948_12250 PF01842 ACT domain OM948_12250 PF01817 Chorismate mutase type II OM948_12255 PF00266 Aminotransferase class-V OM948_12260 PF00174 Oxidoreductase molybdopterin binding domain OM948_12265 PF01794 Ferric reductase like transmembrane component OM948_12290 PF07702 UTRA domain OM948_12290 PF00392 Bacterial regulatory proteins, gntR family OM948_12300 PF07969 Amidohydrolase family OM948_12305 PF00221 Aromatic amino acid lyase OM948_12315 PF17392 Urocanase C-terminal domain OM948_12315 PF17391 Urocanase N-terminal domain OM948_12315 PF01175 Urocanase Rossmann-like domain OM948_12325 PF13360 PQQ-like domain OM948_12330 PF03989 DNA gyrase C-terminal domain, beta-propeller OM948_12330 PF00521 DNA gyrase/topoisomerase IV, subunit A OM948_12335 PF01008 Initiation factor 2 subunit family OM948_12350 PF00152 tRNA synthetases class II (D, K and N) OM948_12355 PF01653 NAD-dependent DNA ligase adenylation domain OM948_12355 PF12826 Helix-hairpin-helix motif OM948_12355 PF03119 NAD-dependent DNA ligase C4 zinc finger domain OM948_12355 PF03120 NAD-dependent DNA ligase OB-fold domain OM948_12355 PF00533 BRCA1 C Terminus (BRCT) domain OM948_12360 PF00155 Aminotransferase class I and II OM948_12370 PF04354 ZipA, C-terminal FtsZ-binding domain OM948_12375 PF02463 RecF/RecN/SMC N terminal domain OM948_12385 PF01281 Ribosomal protein L9, N-terminal domain OM948_12385 PF03948 Ribosomal protein L9, C-terminal domain OM948_12390 PF01084 Ribosomal protein S18 OM948_12395 PF01250 Ribosomal protein S6 OM948_12400 PF01521 Iron-sulphur cluster biosynthesis OM948_12405 PF00152 tRNA synthetases class II (D, K and N) OM948_12405 PF01336 OB-fold nucleic acid binding domain OM948_12440 PF00072 Response regulator receiver domain OM948_12440 PF00196 Bacterial regulatory proteins, luxR family OM948_12485 PF00484 Carbonic anhydrase OM948_12490 PF06052 3-hydroxyanthranilic acid dioxygenase OM948_12500 PF00266 Aminotransferase class-V OM948_12505 PF01494 FAD binding domain OM948_12510 PF00929 Exonuclease OM948_12510 PF08411 Exonuclease C-terminal OM948_12535 PF01513 ATP-NAD kinase OM948_12540 PF01170 Putative RNA methylase family UPF0020 OM948_12540 PF02926 THUMP domain OM948_12540 PF10672 S-adenosylmethionine-dependent methyltransferase OM948_12580 PF00581 Rhodanese-like domain OM948_12585 PF00293 NUDIX domain OM948_12590 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase OM948_12590 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase OM948_12595 PF00378 Enoyl-CoA hydratase/isomerase OM948_12605 PF10576 Iron-sulfur binding domain of endonuclease III OM948_12605 PF00633 Helix-hairpin-helix motif OM948_12605 PF00730 HhH-GPD superfamily base excision DNA repair protein OM948_12610 PF01740 STAS domain OM948_12610 PF00916 Sulfate permease family OM948_12615 PF00484 Carbonic anhydrase OM948_12630 PF12849 PBP superfamily domain OM948_12635 PF12849 PBP superfamily domain OM948_12640 PF00528 Binding-protein-dependent transport system inner membrane component OM948_12645 PF00528 Binding-protein-dependent transport system inner membrane component OM948_12650 PF00005 ABC transporter OM948_12655 PF01895 PhoU domain OM948_12665 PF00929 Exonuclease OM948_12670 PF00990 Diguanylate cyclase, GGDEF domain OM948_12675 PF00588 SpoU rRNA Methylase family OM948_12675 PF08032 RNA 2'-O ribose methyltransferase substrate binding OM948_12685 PF17876 Cold shock domain OM948_12685 PF08461 Ribonuclease R winged-helix domain OM948_12685 PF08206 Ribonuclease B OB domain OM948_12685 PF00773 RNB domain OM948_12685 PF00575 S1 RNA binding domain OM948_12700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OM948_12700 PF02770 Acyl-CoA dehydrogenase, middle domain OM948_12700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OM948_12705 PF01209 ubiE/COQ5 methyltransferase family OM948_12710 PF00809 Pterin binding enzyme OM948_12710 PF02574 Homocysteine S-methyltransferase OM948_12715 PF02607 B12 binding domain OM948_12715 PF02310 B12 binding domain OM948_12715 PF00809 Pterin binding enzyme OM948_12715 PF02574 Homocysteine S-methyltransferase OM948_12715 PF02965 Vitamin B12 dependent methionine synthase, activation domain OM948_12725 PF00294 pfkB family carbohydrate kinase OM948_12730 PF07690 Major Facilitator Superfamily OM948_12735 PF00356 Bacterial regulatory proteins, lacI family OM948_12750 PF04102 SlyX OM948_12755 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain OM948_12755 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain OM948_12755 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain OM948_12760 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase OM948_12760 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase OM948_12765 PF00255 Glutathione peroxidase OM948_12775 PF00392 Bacterial regulatory proteins, gntR family OM948_12780 PF00005 ABC transporter OM948_12805 PF10415 Fumarase C C-terminus OM948_12805 PF00206 Lyase OM948_12810 PF00571 CBS domain OM948_12810 PF03471 Transporter associated domain OM948_12810 PF01595 Cyclin M transmembrane N-terminal domain OM948_12820 PF00206 Lyase OM948_12820 PF08328 Adenylosuccinate lyase C-terminal OM948_12830 PF08007 Cupin superfamily protein OM948_12840 PF16078 2-oxoglutarate dehydrogenase N-terminus OM948_12840 PF00676 Dehydrogenase E1 component OM948_12840 PF16870 2-oxoglutarate dehydrogenase C-terminal OM948_12840 PF02779 Transketolase, pyrimidine binding domain OM948_12845 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) OM948_12845 PF00364 Biotin-requiring enzyme OM948_12845 PF02817 e3 binding domain OM948_12850 PF07992 Pyridine nucleotide-disulphide oxidoreductase OM948_12850 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain OM948_12855 PF03641 Possible lysine decarboxylase OM948_12860 PF01205 Uncharacterized protein family UPF0029 OM948_12865 PF00664 ABC transporter transmembrane region OM948_12865 PF00005 ABC transporter OM948_12870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM948_12870 PF03466 LysR substrate binding domain OM948_12875 PF00664 ABC transporter transmembrane region OM948_12875 PF00005 ABC transporter OM948_12875 PF03412 Peptidase C39 family OM948_12900 PF08543 Phosphomethylpyrimidine kinase OM948_12905 PF00684 DnaJ central domain OM948_12905 PF01556 DnaJ C terminal domain OM948_12905 PF00226 DnaJ domain OM948_12910 PF00012 Hsp70 protein OM948_12915 PF01025 GrpE OM948_12920 PF01628 HrcA protein C terminal domain OM948_12920 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding OM948_12925 PF02463 RecF/RecN/SMC N terminal domain OM948_12930 PF01475 Ferric uptake regulator family OM948_12935 PF04355 SmpA / OmlA family OM948_12940 PF03658 RnfH family Ubiquitin OM948_12945 PF03364 Polyketide cyclase / dehydrase and lipid transport OM948_12950 PF01668 SmpB protein OM948_12955 PF00082 Subtilase family OM948_13010 PF02534 Type IV secretory system Conjugative DNA transfer OM948_13015 PF00872 Transposase, Mutator family OM948_13045 PF00872 Transposase, Mutator family OM948_13130 PF00990 Diguanylate cyclase, GGDEF domain OM948_13140 PF00990 Diguanylate cyclase, GGDEF domain OM948_13145 PF02321 Outer membrane efflux protein OM948_13150 PF00106 short chain dehydrogenase OM948_13155 PF00873 AcrB/AcrD/AcrF family OM948_13160 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OM948_13175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM948_13175 PF03466 LysR substrate binding domain OM948_13180 PF00691 OmpA family OM948_13180 PF05736 OprF membrane domain OM948_13185 PF00875 DNA photolyase OM948_13185 PF03441 FAD binding domain of DNA photolyase OM948_13190 PF00772 DnaB-like helicase N terminal domain OM948_13190 PF03796 DnaB-like helicase C terminal domain OM948_13195 PF03358 NADPH-dependent FMN reductase OM948_13200 PF00733 Asparagine synthase OM948_13200 PF13537 Glutamine amidotransferase domain OM948_13210 PF00043 Glutathione S-transferase, C-terminal domain OM948_13210 PF02798 Glutathione S-transferase, N-terminal domain OM948_13220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OM948_13220 PF02770 Acyl-CoA dehydrogenase, middle domain OM948_13220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OM948_13235 PF01026 TatD related DNase OM948_13240 PF00899 ThiF family OM948_13255 PF00313 'Cold-shock' DNA-binding domain OM948_13265 PF02253 Phospholipase A1 OM948_13270 PF00484 Carbonic anhydrase OM948_13280 PF05681 Fumarate hydratase (Fumerase) OM948_13280 PF05683 Fumarase C-terminus OM948_13285 PF00005 ABC transporter OM948_13290 PF00970 Oxidoreductase FAD-binding domain OM948_13290 PF00175 Oxidoreductase NAD-binding domain OM948_13295 PF00255 Glutathione peroxidase OM948_13300 PF01432 Peptidase family M3 OM948_13305 PF12802 MarR family OM948_13330 PF00854 POT family OM948_13340 PF01915 Glycosyl hydrolase family 3 C-terminal domain OM948_13340 PF00933 Glycosyl hydrolase family 3 N terminal domain OM948_13340 PF14310 Fibronectin type III-like domain OM948_13350 PF07690 Major Facilitator Superfamily OM948_13355 PF00529 HlyD membrane-fusion protein of T1SS OM948_13355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OM948_13360 PF02321 Outer membrane efflux protein OM948_13375 PF03989 DNA gyrase C-terminal domain, beta-propeller OM948_13375 PF00521 DNA gyrase/topoisomerase IV, subunit A OM948_13385 PF05724 Thiopurine S-methyltransferase (TPMT) OM948_13390 PF00210 Ferritin-like domain OM948_13395 PF01804 Penicillin amidase OM948_13425 PF09299 Mu transposase, C-terminal OM948_13425 PF02914 Bacteriophage Mu transposase OM948_13425 PF02316 Mu DNA-binding domain OM948_13425 PF09039 Mu DNA binding, I gamma subdomain OM948_13430 PF09077 Mu B transposition protein, C terminal OM948_13430 PF13401 AAA domain OM948_13495 PF08765 Mor transcription activator family OM948_13535 PF03237 Terminase-like family OM948_13540 PF06074 Protein of unknown function (DUF935) OM948_13545 PF04233 Phage Mu protein F like protein OM948_13565 PF10124 Mu-like prophage major head subunit gpT OM948_13650 PF07715 TonB-dependent Receptor Plug Domain OM948_13650 PF00593 TonB dependent receptor OM948_13660 PF00733 Asparagine synthase OM948_13660 PF13537 Glutamine amidotransferase domain OM948_13665 PF07687 Peptidase dimerisation domain OM948_13665 PF01546 Peptidase family M20/M25/M40 OM948_13670 PF03960 ArsC family OM948_13675 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal OM948_13675 PF00132 Bacterial transferase hexapeptide (six repeats) OM948_13675 PF14602 Hexapeptide repeat of succinyl-transferase OM948_13685 PF00557 Metallopeptidase family M24 OM948_13720 PF00318 Ribosomal protein S2 OM948_13725 PF00889 Elongation factor TS OM948_13730 PF00072 Response regulator receiver domain OM948_13730 PF00990 Diguanylate cyclase, GGDEF domain OM948_13735 PF00696 Amino acid kinase family OM948_13740 PF01765 Ribosome recycling factor OM948_13745 PF01255 Putative undecaprenyl diphosphate synthase OM948_13755 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase OM948_13755 PF13288 DXP reductoisomerase C-terminal domain OM948_13755 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain OM948_13760 PF17820 PDZ domain OM948_13760 PF02163 Peptidase family M50 OM948_13765 PF01103 Surface antigen OM948_13765 PF07244 Surface antigen variable number repeat OM948_13775 PF00132 Bacterial transferase hexapeptide (six repeats) OM948_13775 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD OM948_13780 PF07977 FabA-like domain OM948_13785 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 OM948_13785 PF00132 Bacterial transferase hexapeptide (six repeats) OM948_13790 PF02684 Lipid-A-disaccharide synthetase OM948_13795 PF01351 Ribonuclease HII OM948_13800 PF17657 Bacterial DNA polymerase III alpha subunit finger domain OM948_13800 PF14579 Helix-hairpin-helix motif OM948_13800 PF02811 PHP domain OM948_13800 PF01336 OB-fold nucleic acid binding domain OM948_13800 PF07733 Bacterial DNA polymerase III alpha NTPase domain OM948_13805 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit OM948_13820 PF03653 Uncharacterised protein family (UPF0093) OM948_13840 PF03551 Transcriptional regulator PadR-like family OM948_13860 PF02592 Putative vitamin uptake transporter OM948_13870 PF02574 Homocysteine S-methyltransferase OM948_13875 PF00324 Amino acid permease OM948_13880 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily OM948_13885 PF00005 ABC transporter OM948_13885 PF13732 Domain of unknown function (DUF4162) OM948_13900 PF09334 tRNA synthetases class I (M) OM948_13900 PF01588 Putative tRNA binding domain OM948_13910 PF04060 Putative Fe-S cluster OM948_13925 PF04542 Sigma-70 region 2 OM948_13925 PF04545 Sigma-70, region 4 OM948_13970 PF01042 Endoribonuclease L-PSP OM948_13980 PF09924 Uncharacterised conserved protein (DUF2156) OM948_13980 PF03706 Lysylphosphatidylglycerol synthase TM region OM948_14015 PF07690 Major Facilitator Superfamily OM948_14020 PF00724 NADH:flavin oxidoreductase / NADH oxidase family OM948_14025 PF03831 PhnA domain OM948_14025 PF08274 PhnA Zinc-Ribbon OM948_14035 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase OM948_14055 PF01258 Prokaryotic dksA/traR C4-type zinc finger OM948_14065 PF07043 Protein of unknown function (DUF1328) OM948_14070 PF01863 Protein of unknown function DUF45 OM948_14085 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase OM948_14085 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain OM948_14090 PF03797 Autotransporter beta-domain OM948_14090 PF12951 Passenger-associated-transport-repeat OM948_14090 PF00082 Subtilase family OM948_14095 PF02803 Thiolase, C-terminal domain OM948_14095 PF00108 Thiolase, N-terminal domain OM948_14115 PF00072 Response regulator receiver domain OM948_14115 PF00990 Diguanylate cyclase, GGDEF domain OM948_14130 PF01068 ATP dependent DNA ligase domain OM948_14130 PF04679 ATP dependent DNA ligase C terminal region OM948_14130 PF04675 DNA ligase N terminus OM948_14140 PF01068 ATP dependent DNA ligase domain OM948_14140 PF04679 ATP dependent DNA ligase C terminal region OM948_14140 PF04675 DNA ligase N terminus OM948_14145 PF00270 DEAD/DEAH box helicase OM948_14145 PF08494 DEAD/H associated OM948_14145 PF00271 Helicase conserved C-terminal domain OM948_14155 PF01494 FAD binding domain OM948_14160 PF00313 'Cold-shock' DNA-binding domain OM948_14165 PF01048 Phosphorylase superfamily OM948_14170 PF00156 Phosphoribosyl transferase domain OM948_14175 PF00933 Glycosyl hydrolase family 3 N terminal domain OM948_14180 PF04244 Deoxyribodipyrimidine photo-lyase-related protein OM948_14185 PF01593 Flavin containing amine oxidoreductase OM948_14190 PF01323 DSBA-like thioredoxin domain OM948_14195 PF01928 CYTH domain OM948_14200 PF05958 tRNA (Uracil-5-)-methyltransferase OM948_14210 PF11967 Recombination protein O N terminal OM948_14210 PF02565 Recombination protein O C terminal OM948_14215 PF07650 KH domain OM948_14215 PF01926 50S ribosome-binding GTPase OM948_14220 PF14622 Ribonuclease-III-like OM948_14220 PF00035 Double-stranded RNA binding motif OM948_14230 PF10502 Signal peptidase, peptidase S26 OM948_14235 PF00009 Elongation factor Tu GTP binding domain OM948_14235 PF00679 Elongation factor G C-terminus OM948_14235 PF03144 Elongation factor Tu domain 2 OM948_14235 PF06421 GTP-binding protein LepA C-terminus OM948_14240 PF13180 PDZ domain OM948_14250 PF08281 Sigma-70, region 4 OM948_14250 PF04542 Sigma-70 region 2 OM948_14255 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain OM948_14255 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain OM948_14255 PF00378 Enoyl-CoA hydratase/isomerase OM948_14280 PF01545 Cation efflux family OM948_14285 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase OM948_14285 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase OM948_14290 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain OM948_14290 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain OM948_14290 PF00378 Enoyl-CoA hydratase/isomerase OM948_14295 PF00378 Enoyl-CoA hydratase/isomerase OM948_14300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OM948_14300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OM948_14300 PF02770 Acyl-CoA dehydrogenase, middle domain OM948_14305 PF00171 Aldehyde dehydrogenase family OM948_14310 PF06114 IrrE N-terminal-like domain OM948_14310 PF01381 Helix-turn-helix OM948_14310 PF09856 Predicted transcriptional regulator (DUF2083) OM948_14320 PF07745 Glycosyl hydrolase family 53 OM948_14325 PF00703 Glycosyl hydrolases family 2 OM948_14325 PF02836 Glycosyl hydrolases family 2, TIM barrel domain OM948_14325 PF02837 Glycosyl hydrolases family 2, sugar binding domain OM948_14325 PF16355 Domain of unknown function (DUF4982) OM948_14325 PF13287 Fn3 associated OM948_14350 PF03527 RHS protein OM948_14350 PF05593 RHS Repeat OM948_14360 PF01624 MutS domain I OM948_14360 PF05188 MutS domain II OM948_14360 PF05192 MutS domain III OM948_14360 PF05190 MutS family domain IV OM948_14360 PF00488 MutS domain V OM948_14370 PF00141 Peroxidase OM948_14375 PF01479 S4 domain OM948_14390 PF01554 MatE OM948_14395 PF01245 Ribosomal protein L19 OM948_14400 PF01746 tRNA (Guanine-1)-methyltransferase OM948_14405 PF05239 PRC-barrel domain OM948_14405 PF01782 RimM N-terminal domain OM948_14410 PF00886 Ribosomal protein S16 OM948_14415 PF01063 Amino-transferase class IV OM948_14420 PF03060 Nitronate monooxygenase OM948_14425 PF02978 Signal peptide binding domain OM948_14425 PF02881 SRP54-type protein, helical bundle domain OM948_14425 PF00448 SRP54-type protein, GTPase domain OM948_14430 PF01578 Cytochrome C assembly protein OM948_14435 PF01263 Aldose 1-epimerase OM948_14440 PF06964 Alpha-L-arabinofuranosidase C-terminal domain OM948_14465 PF00072 Response regulator receiver domain OM948_14470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_14470 PF13426 PAS domain OM948_14470 PF00072 Response regulator receiver domain OM948_14475 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) OM948_14475 PF00072 Response regulator receiver domain OM948_14475 PF00512 His Kinase A (phospho-acceptor) domain OM948_14475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_14475 PF00672 HAMP domain OM948_14475 PF01627 Hpt domain OM948_14480 PF03705 CheR methyltransferase, all-alpha domain OM948_14480 PF01739 CheR methyltransferase, SAM binding domain OM948_14485 PF01339 CheB methylesterase OM948_14490 PF13493 Domain of unknown function (DUF4118) OM948_14490 PF13492 GAF domain OM948_14490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_14490 PF00512 His Kinase A (phospho-acceptor) domain OM948_14490 PF02702 Osmosensitive K+ channel His kinase sensor domain OM948_14495 PF07237 Protein of unknown function (DUF1428) OM948_14500 PF00085 Thioredoxin OM948_14505 PF07715 TonB-dependent Receptor Plug Domain OM948_14505 PF00593 TonB dependent receptor OM948_14510 PF04616 Glycosyl hydrolases family 43 OM948_14510 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain OM948_14515 PF00072 Response regulator receiver domain OM948_14515 PF13188 PAS domain OM948_14515 PF08448 PAS fold OM948_14515 PF00512 His Kinase A (phospho-acceptor) domain OM948_14515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_14520 PF00512 His Kinase A (phospho-acceptor) domain OM948_14520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_14520 PF00672 HAMP domain OM948_14520 PF17149 Periplasmic sensor domain found in signal transduction proteins OM948_14520 PF00072 Response regulator receiver domain OM948_14520 PF01627 Hpt domain OM948_14530 PF13581 Histidine kinase-like ATPase domain OM948_14535 PF01740 STAS domain OM948_14540 PF08678 Rsbr N terminal OM948_14540 PF01740 STAS domain OM948_14550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_14550 PF00183 Hsp90 protein OM948_14555 PF12833 Helix-turn-helix domain OM948_14565 PF05656 Protein of unknown function (DUF805) OM948_14570 PF18073 Rubredoxin metal binding domain OM948_14580 PF03626 Prokaryotic Cytochrome C oxidase subunit IV OM948_14585 PF00510 Cytochrome c oxidase subunit III OM948_14590 PF00115 Cytochrome C and Quinol oxidase polypeptide I OM948_14595 PF06481 COX Aromatic Rich Motif OM948_14595 PF00116 Cytochrome C oxidase subunit II, periplasmic domain OM948_14605 PF02401 LytB protein OM948_14610 PF01252 Signal peptidase (SPase) II OM948_14615 PF06827 Zinc finger found in FPG and IleRS OM948_14615 PF08264 Anticodon-binding domain of tRNA OM948_14615 PF00133 tRNA synthetases class I (I, L, M and V) OM948_14620 PF06574 FAD synthetase OM948_14620 PF01687 Riboflavin kinase OM948_14625 PF03023 Lipid II flippase MurJ OM948_14630 PF01649 Ribosomal protein S20 OM948_14635 PF01018 GTP1/OBG OM948_14635 PF01926 50S ribosome-binding GTPase OM948_14640 PF01016 Ribosomal L27 protein OM948_14645 PF00829 Ribosomal prokaryotic L21 protein OM948_14650 PF17760 UvrA interaction domain OM948_14650 PF00005 ABC transporter OM948_14650 PF17755 UvrA DNA-binding domain OM948_14665 PF00378 Enoyl-CoA hydratase/isomerase OM948_14690 PF04376 Arginine-tRNA-protein transferase, N terminus OM948_14690 PF04377 Arginine-tRNA-protein transferase, C terminus OM948_14700 PF02222 ATP-grasp domain OM948_14725 PF00730 HhH-GPD superfamily base excision DNA repair protein OM948_14740 PF00072 Response regulator receiver domain OM948_14740 PF00196 Bacterial regulatory proteins, luxR family OM948_14745 PF07730 Histidine kinase OM948_14755 PF03775 Septum formation inhibitor MinC, C-terminal domain OM948_14755 PF05209 Septum formation inhibitor MinC, N-terminal domain OM948_14760 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain OM948_14765 PF03776 Septum formation topological specificity factor MinE OM948_14775 PF00512 His Kinase A (phospho-acceptor) domain OM948_14775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_14775 PF08521 Two-component sensor kinase N-terminal OM948_14780 PF00072 Response regulator receiver domain OM948_14780 PF00486 Transcriptional regulatory protein, C terminal OM948_14795 PF08019 Phosphoethanolamine transferase EptA/EptB OM948_14795 PF00884 Sulfatase OM948_14810 PF07690 Major Facilitator Superfamily OM948_14815 PF02347 Glycine cleavage system P-protein OM948_14820 PF00135 Carboxylesterase family OM948_14825 PF00248 Aldo/keto reductase family OM948_14830 PF06628 Catalase-related immune-responsive OM948_14830 PF18011 C-terminal domain found in long catalases OM948_14830 PF00199 Catalase OM948_14850 PF12833 Helix-turn-helix domain OM948_14850 PF02311 AraC-like ligand binding domain OM948_14865 PF00326 Prolyl oligopeptidase family OM948_14865 PF07676 WD40-like Beta Propeller Repeat OM948_14865 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region OM948_14880 PF03169 OPT oligopeptide transporter protein OM948_14895 PF17657 Bacterial DNA polymerase III alpha subunit finger domain OM948_14895 PF07733 Bacterial DNA polymerase III alpha NTPase domain OM948_14895 PF14579 Helix-hairpin-helix motif OM948_14895 PF02811 PHP domain OM948_14910 PF01726 LexA DNA binding domain OM948_14910 PF00717 Peptidase S24-like OM948_14945 PF00111 2Fe-2S iron-sulfur cluster binding domain OM948_14945 PF01799 [2Fe-2S] binding domain OM948_14950 PF00941 FAD binding domain in molybdopterin dehydrogenase OM948_14950 PF03450 CO dehydrogenase flavoprotein C-terminal domain OM948_14955 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase OM948_14955 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain OM948_14960 PF17755 UvrA DNA-binding domain OM948_14985 PF07992 Pyridine nucleotide-disulphide oxidoreductase OM948_15000 PF00106 short chain dehydrogenase OM948_15005 PF07971 Glycosyl hydrolase family 92 OM948_15005 PF17678 Glycosyl hydrolase family 92 N-terminal domain OM948_15015 PF00723 Glycosyl hydrolases family 15 OM948_15025 PF01256 Carbohydrate kinase OM948_15030 PF00300 Histidine phosphatase superfamily (branch 1) OM948_15030 PF13456 Reverse transcriptase-like OM948_15055 PF00580 UvrD/REP helicase N-terminal domain OM948_15055 PF13361 UvrD-like helicase C-terminal domain OM948_15060 PF01555 DNA methylase OM948_15105 PF00440 Bacterial regulatory proteins, tetR family OM948_15120 PF01433 Peptidase family M1 domain OM948_15120 PF11838 ERAP1-like C-terminal domain OM948_15125 PF00709 Adenylosuccinate synthetase OM948_15140 PF01145 SPFH domain / Band 7 family OM948_15145 PF12221 Bacterial membrane protein N terminal OM948_15145 PF01145 SPFH domain / Band 7 family OM948_15150 PF00072 Response regulator receiver domain OM948_15155 PF00226 DnaJ domain OM948_15155 PF01556 DnaJ C terminal domain OM948_15165 PF08534 Redoxin OM948_15175 PF06832 Penicillin-Binding Protein C-terminus Family OM948_15175 PF00912 Transglycosylase OM948_15175 PF00905 Penicillin binding protein transpeptidase domain OM948_15190 PF11974 Bacterial alpha-2-macroglobulin MG3 domain OM948_15190 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain OM948_15190 PF07703 Alpha-2-macroglobulin bait region domain OM948_15190 PF00207 Alpha-2-macroglobulin family OM948_15190 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain OM948_15190 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain OM948_15190 PF17962 Bacterial macroglobulin domain 6 OM948_15190 PF01835 MG2 domain OM948_15200 PF00593 TonB dependent receptor OM948_15200 PF07715 TonB-dependent Receptor Plug Domain OM948_15205 PF04303 PrpF protein OM948_15215 PF00694 Aconitase C-terminal domain OM948_15215 PF00330 Aconitase family (aconitate hydratase) OM948_15220 PF00285 Citrate synthase, C-terminal domain OM948_15230 PF02954 Bacterial regulatory protein, Fis family OM948_15230 PF06506 Propionate catabolism activator OM948_15230 PF00158 Sigma-54 interaction domain OM948_15250 PF09115 DNA polymerase III, delta subunit, C terminal OM948_15255 PF02618 YceG-like family OM948_15260 PF04715 Anthranilate synthase component I, N terminal region OM948_15260 PF00425 chorismate binding enzyme OM948_15265 PF00109 Beta-ketoacyl synthase, N-terminal domain OM948_15265 PF02801 Beta-ketoacyl synthase, C-terminal domain OM948_15270 PF00550 Phosphopantetheine attachment site OM948_15280 PF00698 Acyl transferase domain OM948_15290 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III OM948_15290 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal OM948_15295 PF01783 Ribosomal L32p protein family OM948_15300 PF02620 Large ribosomal RNA subunit accumulation protein YceD OM948_15305 PF02545 Maf-like protein OM948_15330 PF07726 ATPase family associated with various cellular activities (AAA) OM948_15330 PF17863 AAA lid domain OM948_15340 PF11992 Domain of unknown function (DUF3488) OM948_15340 PF13559 Domain of unknown function (DUF4129) OM948_15340 PF01841 Transglutaminase-like superfamily OM948_15350 PF01230 HIT domain OM948_15355 PF02132 RecR protein OM948_15355 PF13662 Toprim domain OM948_15360 PF02575 YbaB/EbfC DNA-binding family OM948_15365 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding OM948_15365 PF12169 DNA polymerase III subunits gamma and tau domain III OM948_15365 PF12170 DNA polymerase III tau subunit V interacting with alpha OM948_15380 PF02391 MoaE protein OM948_15385 PF02597 ThiS family OM948_15390 PF01967 MoaC family OM948_15400 PF06463 Molybdenum Cofactor Synthesis C OM948_15400 PF04055 Radical SAM superfamily OM948_15405 PF00753 Metallo-beta-lactamase superfamily OM948_15405 PF12706 Beta-lactamase superfamily domain OM948_15415 PF01075 Glycosyltransferase family 9 (heptosyltransferase) OM948_15435 PF00929 Exonuclease OM948_15440 PF00075 RNase H OM948_15450 PF00753 Metallo-beta-lactamase superfamily OM948_15450 PF16123 Hydroxyacylglutathione hydrolase C-terminus OM948_15480 PF00216 Bacterial DNA-binding protein OM948_15485 PF05362 Lon protease (S16) C-terminal proteolytic domain OM948_15485 PF02190 ATP-dependent protease La (LON) substrate-binding domain OM948_15485 PF00004 ATPase family associated with various cellular activities (AAA) OM948_15490 PF07724 AAA domain (Cdc48 subfamily) OM948_15490 PF10431 C-terminal, D2-small domain, of ClpB protein OM948_15490 PF06689 ClpX C4-type zinc finger OM948_15495 PF00574 Clp protease OM948_15500 PF05698 Bacterial trigger factor protein (TF) C-terminus OM948_15500 PF05697 Bacterial trigger factor protein (TF) OM948_15510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_15510 PF00512 His Kinase A (phospho-acceptor) domain OM948_15510 PF00989 PAS fold OM948_15520 PF00717 Peptidase S24-like OM948_15525 PF13438 Domain of unknown function (DUF4113) OM948_15525 PF11799 impB/mucB/samB family C-terminal domain OM948_15525 PF11798 IMS family HHH motif OM948_15525 PF00817 impB/mucB/samB family OM948_15535 PF00872 Transposase, Mutator family OM948_15560 PF01555 DNA methylase OM948_15615 PF00182 Chitinase class I OM948_15830 PF00180 Isocitrate/isopropylmalate dehydrogenase OM948_15840 PF00462 Glutaredoxin OM948_15845 PF13181 Tetratricopeptide repeat OM948_15845 PF01435 Peptidase family M48 OM948_15850 PF00072 Response regulator receiver domain OM948_15850 PF00486 Transcriptional regulatory protein, C terminal OM948_15855 PF00989 PAS fold OM948_15855 PF11808 Phosphate regulon sensor protein PhoR OM948_15855 PF00512 His Kinase A (phospho-acceptor) domain OM948_15855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_15860 PF02503 Polyphosphate kinase middle domain OM948_15860 PF13090 Polyphosphate kinase C-terminal domain 2 OM948_15860 PF17941 Polyphosphate kinase C-terminal domain 1 OM948_15860 PF13089 Polyphosphate kinase N-terminal domain OM948_15865 PF02541 Ppx/GppA phosphatase family OM948_15870 PF13439 Glycosyltransferase Family 4 OM948_15870 PF00534 Glycosyl transferases group 1 OM948_15875 PF01569 PAP2 superfamily OM948_15880 PF00149 Calcineurin-like phosphoesterase OM948_15895 PF04305 Protein of unknown function (DUF455) OM948_15900 PF00156 Phosphoribosyl transferase domain OM948_15915 PF08245 Mur ligase middle domain OM948_15915 PF02875 Mur ligase family, glutamate ligase domain OM948_15920 PF00300 Histidine phosphatase superfamily (branch 1) OM948_15925 PF10459 Peptidase S46 OM948_15930 PF04185 Phosphoesterase family OM948_15930 PF05506 Domain of unknown function (DUF756) OM948_15940 PF08240 Alcohol dehydrogenase GroES-like domain OM948_15940 PF00107 Zinc-binding dehydrogenase OM948_15950 PF00005 ABC transporter OM948_15950 PF17850 CysA C-terminal regulatory domain OM948_15950 PF12857 TOBE-like domain OM948_15955 PF00528 Binding-protein-dependent transport system inner membrane component OM948_15960 PF00528 Binding-protein-dependent transport system inner membrane component OM948_15970 PF00155 Aminotransferase class I and II OM948_15980 PF00849 RNA pseudouridylate synthase OM948_15990 PF00691 OmpA family OM948_15990 PF05736 OprF membrane domain OM948_15995 PF08240 Alcohol dehydrogenase GroES-like domain OM948_15995 PF00107 Zinc-binding dehydrogenase OM948_16000 PF00724 NADH:flavin oxidoreductase / NADH oxidase family OM948_16000 PF07992 Pyridine nucleotide-disulphide oxidoreductase OM948_16010 PF00043 Glutathione S-transferase, C-terminal domain OM948_16010 PF02798 Glutathione S-transferase, N-terminal domain OM948_16015 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain OM948_16015 PF00056 lactate/malate dehydrogenase, NAD binding domain OM948_16020 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD OM948_16025 PF00679 Elongation factor G C-terminus OM948_16025 PF00009 Elongation factor Tu GTP binding domain OM948_16025 PF03144 Elongation factor Tu domain 2 OM948_16035 PF01425 Amidase OM948_16050 PF01474 Class-II DAHP synthetase family OM948_16065 PF02600 Disulfide bond formation protein DsbB OM948_16070 PF01196 Ribosomal protein L17 OM948_16075 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain OM948_16075 PF01000 RNA polymerase Rpb3/RpoA insert domain OM948_16075 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain OM948_16080 PF00163 Ribosomal protein S4/S9 N-terminal domain OM948_16080 PF01479 S4 domain OM948_16085 PF00411 Ribosomal protein S11 OM948_16090 PF00416 Ribosomal protein S13/S18 OM948_16095 PF00344 SecY translocase OM948_16100 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A OM948_16105 PF00327 Ribosomal protein L30p/L7e OM948_16110 PF03719 Ribosomal protein S5, C-terminal domain OM948_16110 PF00333 Ribosomal protein S5, N-terminal domain OM948_16115 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast OM948_16120 PF00347 Ribosomal protein L6 OM948_16125 PF00410 Ribosomal protein S8 OM948_16130 PF00253 Ribosomal protein S14p/S29e OM948_16135 PF00281 Ribosomal protein L5 OM948_16135 PF00673 ribosomal L5P family C-terminus OM948_16140 PF00467 KOW motif OM948_16140 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 OM948_16145 PF00238 Ribosomal protein L14p/L23e OM948_16150 PF00366 Ribosomal protein S17 OM948_16155 PF00831 Ribosomal L29 protein OM948_16160 PF00252 Ribosomal protein L16p/L10e OM948_16165 PF07650 KH domain OM948_16165 PF00189 Ribosomal protein S3, C-terminal domain OM948_16170 PF00237 Ribosomal protein L22p/L17e OM948_16175 PF00203 Ribosomal protein S19 OM948_16180 PF00181 Ribosomal Proteins L2, RNA binding domain OM948_16180 PF03947 Ribosomal Proteins L2, C-terminal domain OM948_16185 PF00276 Ribosomal protein L23 OM948_16190 PF00573 Ribosomal protein L4/L1 family OM948_16195 PF00297 Ribosomal protein L3 OM948_16200 PF00338 Ribosomal protein S10p/S20e OM948_16205 PF03144 Elongation factor Tu domain 2 OM948_16205 PF03143 Elongation factor Tu C-terminal domain OM948_16205 PF00009 Elongation factor Tu GTP binding domain OM948_16210 PF00679 Elongation factor G C-terminus OM948_16210 PF14492 Elongation Factor G, domain II OM948_16210 PF03764 Elongation factor G, domain IV OM948_16210 PF00009 Elongation factor Tu GTP binding domain OM948_16210 PF03144 Elongation factor Tu domain 2 OM948_16215 PF00177 Ribosomal protein S7p/S5e OM948_16220 PF00164 Ribosomal protein S12/S23 OM948_16225 PF04998 RNA polymerase Rpb1, domain 5 OM948_16225 PF04997 RNA polymerase Rpb1, domain 1 OM948_16225 PF00623 RNA polymerase Rpb1, domain 2 OM948_16225 PF04983 RNA polymerase Rpb1, domain 3 OM948_16225 PF05000 RNA polymerase Rpb1, domain 4 OM948_16230 PF00562 RNA polymerase Rpb2, domain 6 OM948_16230 PF10385 RNA polymerase beta subunit external 1 domain OM948_16230 PF04565 RNA polymerase Rpb2, domain 3 OM948_16230 PF04561 RNA polymerase Rpb2, domain 2 OM948_16230 PF04560 RNA polymerase Rpb2, domain 7 OM948_16230 PF04563 RNA polymerase beta subunit OM948_16235 PF16320 Ribosomal protein L7/L12 dimerisation domain OM948_16235 PF00542 Ribosomal protein L7/L12 C-terminal domain OM948_16240 PF00466 Ribosomal protein L10 OM948_16245 PF00687 Ribosomal protein L1p/L10e family OM948_16250 PF00298 Ribosomal protein L11, RNA binding domain OM948_16250 PF03946 Ribosomal protein L11, N-terminal domain OM948_16255 PF00467 KOW motif OM948_16255 PF02357 Transcription termination factor nusG OM948_16260 PF00584 SecE/Sec61-gamma subunits of protein translocation complex OM948_16270 PF03143 Elongation factor Tu C-terminal domain OM948_16270 PF03144 Elongation factor Tu domain 2 OM948_16270 PF00009 Elongation factor Tu GTP binding domain OM948_16290 PF01926 50S ribosome-binding GTPase OM948_16290 PF06071 Protein of unknown function (DUF933) OM948_16295 PF01195 Peptidyl-tRNA hydrolase OM948_16300 PF01386 Ribosomal L25p family OM948_16300 PF14693 Ribosomal protein TL5, C-terminal domain OM948_16305 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase OM948_16305 PF14572 Phosphoribosyl synthetase-associated domain OM948_16315 PF00288 GHMP kinases N terminal domain OM948_16315 PF08544 GHMP kinases C terminal OM948_16320 PF03550 Outer membrane lipoprotein LolB OM948_16330 PF01488 Shikimate / quinate 5-dehydrogenase OM948_16330 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain OM948_16330 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain OM948_16335 PF00472 RF-1 domain OM948_16335 PF03462 PCRF domain OM948_16345 PF00994 Probable molybdopterin binding domain OM948_16350 PF03976 Polyphosphate kinase 2 (PPK2) OM948_16360 PF00708 Acylphosphatase OM948_16365 PF08534 Redoxin OM948_16370 PF03631 Virulence factor BrkB OM948_16375 PF03358 NADPH-dependent FMN reductase OM948_16385 PF17189 Glycosyl hydrolase family 30 beta sandwich domain OM948_16385 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain OM948_16395 PF04073 Aminoacyl-tRNA editing domain OM948_16400 PF04151 Bacterial pre-peptidase C-terminal domain OM948_16400 PF00082 Subtilase family OM948_16405 PF00082 Subtilase family OM948_16405 PF04151 Bacterial pre-peptidase C-terminal domain OM948_16415 PF01063 Amino-transferase class IV OM948_16430 PF02233 NAD(P) transhydrogenase beta subunit OM948_16435 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch OM948_16455 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch OM948_16455 PF05222 Alanine dehydrogenase/PNT, N-terminal domain OM948_16455 PF01262 Alanine dehydrogenase/PNT, C-terminal domain OM948_16485 PF00476 DNA polymerase family A OM948_16485 PF01367 5'-3' exonuclease, C-terminal SAM fold OM948_16485 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain OM948_16485 PF01612 3'-5' exonuclease OM948_16490 PF00293 NUDIX domain OM948_16505 PF00561 alpha/beta hydrolase fold OM948_16510 PF05175 Methyltransferase small domain OM948_16510 PF17827 PrmC N-terminal domain OM948_16515 PF10417 C-terminal domain of 1-Cys peroxiredoxin OM948_16515 PF00578 AhpC/TSA family OM948_16520 PF13192 Thioredoxin domain OM948_16520 PF07992 Pyridine nucleotide-disulphide oxidoreductase OM948_16525 PF03466 LysR substrate binding domain OM948_16525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM948_16530 PF01272 Transcription elongation factor, GreA/GreB, C-term OM948_16530 PF14760 Rnk N-terminus OM948_16535 PF00923 Transaldolase/Fructose-6-phosphate aldolase OM948_16545 PF01625 Peptide methionine sulfoxide reductase OM948_16555 PF00196 Bacterial regulatory proteins, luxR family OM948_16555 PF00072 Response regulator receiver domain OM948_16560 PF00512 His Kinase A (phospho-acceptor) domain OM948_16560 PF00072 Response regulator receiver domain OM948_16560 PF01627 Hpt domain OM948_16560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_16560 PF17149 Periplasmic sensor domain found in signal transduction proteins OM948_16560 PF00672 HAMP domain OM948_16565 PF00072 Response regulator receiver domain OM948_16565 PF00990 Diguanylate cyclase, GGDEF domain OM948_16580 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain OM948_16580 PF00749 tRNA synthetases class I (E and Q), catalytic domain OM948_16590 PF00892 EamA-like transporter family OM948_16615 PF01728 FtsJ-like methyltransferase OM948_16615 PF18125 RlmM ferredoxin-like domain OM948_16620 PF01408 Oxidoreductase family, NAD-binding Rossmann fold OM948_16620 PF02894 Oxidoreductase family, C-terminal alpha/beta domain OM948_16645 PF00378 Enoyl-CoA hydratase/isomerase OM948_16650 PF00171 Aldehyde dehydrogenase family OM948_16655 PF00501 AMP-binding enzyme OM948_16655 PF13193 AMP-binding enzyme C-terminal domain OM948_16660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM948_16660 PF03466 LysR substrate binding domain OM948_16665 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit OM948_16665 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase OM948_16670 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase OM948_16675 PF00392 Bacterial regulatory proteins, gntR family OM948_16675 PF07729 FCD domain OM948_16695 PF01494 FAD binding domain OM948_16700 PF01494 FAD binding domain OM948_16715 PF01923 Cobalamin adenosyltransferase OM948_16720 PF00850 Histone deacetylase domain OM948_16730 PF04453 LPS transport system D OM948_16730 PF03968 OstA-like protein OM948_16735 PF09312 SurA N-terminal domain OM948_16735 PF00639 PPIC-type PPIASE domain OM948_16740 PF04166 Pyridoxal phosphate biosynthetic protein PdxA OM948_16745 PF00398 Ribosomal RNA adenine dimethylase OM948_16750 PF04379 ApaG domain OM948_16755 PF00149 Calcineurin-like phosphoesterase OM948_16760 PF00005 ABC transporter OM948_16760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region OM948_16765 PF12911 N-terminal TM domain of oligopeptide transport permease C OM948_16765 PF00528 Binding-protein-dependent transport system inner membrane component OM948_16770 PF00528 Binding-protein-dependent transport system inner membrane component OM948_16775 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle OM948_16780 PF00296 Luciferase-like monooxygenase OM948_16800 PF03358 NADPH-dependent FMN reductase OM948_16805 PF00296 Luciferase-like monooxygenase OM948_16815 PF00528 Binding-protein-dependent transport system inner membrane component OM948_16820 PF00005 ABC transporter OM948_16825 PF08028 Acyl-CoA dehydrogenase, C-terminal domain OM948_16825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OM948_16830 PF00158 Sigma-54 interaction domain OM948_16835 PF00186 Dihydrofolate reductase OM948_16845 PF00303 Thymidylate synthase OM948_16850 PF01790 Prolipoprotein diacylglyceryl transferase OM948_16870 PF01219 Prokaryotic diacylglycerol kinase OM948_16880 PF08521 Two-component sensor kinase N-terminal OM948_16880 PF00512 His Kinase A (phospho-acceptor) domain OM948_16880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_16885 PF00486 Transcriptional regulatory protein, C terminal OM948_16885 PF00072 Response regulator receiver domain OM948_16890 PF13472 GDSL-like Lipase/Acylhydrolase family OM948_16895 PF00005 ABC transporter OM948_16905 PF02668 Taurine catabolism dioxygenase TauD, TfdA family OM948_16915 PF00005 ABC transporter OM948_16920 PF00528 Binding-protein-dependent transport system inner membrane component OM948_16940 PF00593 TonB dependent receptor OM948_16940 PF07715 TonB-dependent Receptor Plug Domain OM948_16950 PF00248 Aldo/keto reductase family OM948_16955 PF07670 Nucleoside recognition OM948_16955 PF07662 Na+ dependent nucleoside transporter C-terminus OM948_16955 PF01773 Na+ dependent nucleoside transporter N-terminus OM948_16960 PF00294 pfkB family carbohydrate kinase OM948_16970 PF01207 Dihydrouridine synthase (Dus) OM948_16975 PF13649 Methyltransferase domain OM948_16985 PF02773 S-adenosylmethionine synthetase, C-terminal domain OM948_16985 PF00438 S-adenosylmethionine synthetase, N-terminal domain OM948_16985 PF02772 S-adenosylmethionine synthetase, central domain OM948_16990 PF00328 Histidine phosphatase superfamily (branch 2) OM948_17005 PF00691 OmpA family OM948_17005 PF01389 OmpA-like transmembrane domain OM948_17025 PF00311 Phosphoenolpyruvate carboxylase OM948_17035 PF05221 S-adenosyl-L-homocysteine hydrolase OM948_17035 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain OM948_17040 PF13649 Methyltransferase domain OM948_17050 PF00685 Sulfotransferase domain OM948_17070 PF00128 Alpha amylase, catalytic domain OM948_17075 PF01408 Oxidoreductase family, NAD-binding Rossmann fold OM948_17085 PF00082 Subtilase family OM948_17085 PF09286 Pro-kumamolisin, activation domain OM948_17090 PF08659 KR domain OM948_17090 PF00698 Acyl transferase domain OM948_17090 PF08240 Alcohol dehydrogenase GroES-like domain OM948_17090 PF00107 Zinc-binding dehydrogenase OM948_17090 PF14765 Polyketide synthase dehydratase OM948_17090 PF16197 Ketoacyl-synthetase C-terminal extension OM948_17090 PF00109 Beta-ketoacyl synthase, N-terminal domain OM948_17090 PF02801 Beta-ketoacyl synthase, C-terminal domain OM948_17090 PF00550 Phosphopantetheine attachment site OM948_17100 PF02219 Methylenetetrahydrofolate reductase OM948_17110 PF00293 NUDIX domain OM948_17115 PF02810 SEC-C motif OM948_17115 PF07517 SecA DEAD-like domain OM948_17115 PF01043 SecA preprotein cross-linking domain OM948_17115 PF07516 SecA Wing and Scaffold domain OM948_17120 PF08525 Opacity-associated protein A N-terminal motif OM948_17120 PF01476 LysM domain OM948_17120 PF01551 Peptidase family M23 OM948_17130 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase OM948_17135 PF12327 FtsZ family, C-terminal domain OM948_17135 PF00091 Tubulin/FtsZ family, GTPase domain OM948_17140 PF02491 SHS2 domain inserted in FTSA OM948_17145 PF03799 Cell division protein FtsQ OM948_17145 PF08478 POTRA domain, FtsQ-type OM948_17150 PF07478 D-ala D-ala ligase C-terminus OM948_17150 PF01820 D-ala D-ala ligase N-terminus OM948_17155 PF08245 Mur ligase middle domain OM948_17155 PF02875 Mur ligase family, glutamate ligase domain OM948_17155 PF01225 Mur ligase family, catalytic domain OM948_17160 PF04101 Glycosyltransferase family 28 C-terminal domain OM948_17160 PF03033 Glycosyltransferase family 28 N-terminal domain OM948_17165 PF01098 Cell cycle protein OM948_17170 PF00953 Glycosyl transferase family 4 OM948_17175 PF01225 Mur ligase family, catalytic domain OM948_17175 PF02875 Mur ligase family, glutamate ligase domain OM948_17175 PF08245 Mur ligase middle domain OM948_17180 PF01225 Mur ligase family, catalytic domain OM948_17180 PF02875 Mur ligase family, glutamate ligase domain OM948_17180 PF08245 Mur ligase middle domain OM948_17185 PF00905 Penicillin binding protein transpeptidase domain OM948_17185 PF03717 Penicillin-binding Protein dimerisation domain OM948_17190 PF04999 Cell division protein FtsL OM948_17195 PF01795 MraW methylase family OM948_17200 PF02381 MraZ protein, putative antitoxin-like OM948_17215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases OM948_17225 PF02021 Uncharacterised protein family UPF0102 OM948_17230 PF04307 LexA-binding, inner membrane-associated putative hydrolase OM948_17235 PF02913 FAD linked oxidases, C-terminal domain OM948_17235 PF01565 FAD binding domain OM948_17250 PF00072 Response regulator receiver domain OM948_17250 PF00486 Transcriptional regulatory protein, C terminal OM948_17255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_17255 PF00512 His Kinase A (phospho-acceptor) domain OM948_17255 PF02702 Osmosensitive K+ channel His kinase sensor domain OM948_17255 PF13492 GAF domain OM948_17255 PF13493 Domain of unknown function (DUF4118) OM948_17260 PF02669 K+-transporting ATPase, c chain OM948_17270 PF03814 Potassium-transporting ATPase A subunit OM948_17290 PF02769 AIR synthase related protein, C-terminal domain OM948_17290 PF00586 AIR synthase related protein, N-terminal domain OM948_17295 PF01029 NusB family OM948_17300 PF00885 6,7-dimethyl-8-ribityllumazine synthase OM948_17305 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase OM948_17305 PF00925 GTP cyclohydrolase II OM948_17310 PF00677 Lumazine binding domain OM948_17320 PF01872 RibD C-terminal domain OM948_17320 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region OM948_17330 PF03477 ATP cone domain OM948_17335 PF00464 Serine hydroxymethyltransferase OM948_17345 PF12848 ABC transporter OM948_17345 PF00005 ABC transporter OM948_17355 PF00892 EamA-like transporter family OM948_17360 PF02567 Phenazine biosynthesis-like protein OM948_17365 PF00155 Aminotransferase class I and II OM948_17365 PF00392 Bacterial regulatory proteins, gntR family OM948_17375 PF00756 Putative esterase OM948_17390 PF02583 Metal-sensitive transcriptional repressor OM948_17405 PF00486 Transcriptional regulatory protein, C terminal OM948_17405 PF00072 Response regulator receiver domain OM948_17410 PF00672 HAMP domain OM948_17410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_17410 PF00512 His Kinase A (phospho-acceptor) domain OM948_17415 PF04107 Glutamate-cysteine ligase family 2(GCS2) OM948_17425 PF10996 Beta-Casp domain OM948_17425 PF00753 Metallo-beta-lactamase superfamily OM948_17425 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain OM948_17430 PF01926 50S ribosome-binding GTPase OM948_17435 PF00034 Cytochrome c OM948_17445 PF01323 DSBA-like thioredoxin domain OM948_17460 PF02028 BCCT, betaine/carnitine/choline family transporter OM948_17465 PF00171 Aldehyde dehydrogenase family OM948_17470 PF00732 GMC oxidoreductase OM948_17470 PF05199 GMC oxidoreductase OM948_17475 PF12627 Probable RNA and SrmB- binding site of polymerase A OM948_17475 PF01743 Poly A polymerase head domain OM948_17475 PF01966 HD domain OM948_17490 PF01979 Amidohydrolase family OM948_17495 PF01380 SIS domain OM948_17500 PF00356 Bacterial regulatory proteins, lacI family OM948_17505 PF07690 Major Facilitator Superfamily OM948_17510 PF07702 UTRA domain OM948_17510 PF00392 Bacterial regulatory proteins, gntR family OM948_17525 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 OM948_17525 PF16355 Domain of unknown function (DUF4982) OM948_17525 PF02836 Glycosyl hydrolases family 2, TIM barrel domain OM948_17525 PF02837 Glycosyl hydrolases family 2, sugar binding domain OM948_17525 PF00703 Glycosyl hydrolases family 2 OM948_17550 PF03934 Type II secretion system (T2SS), protein K OM948_17555 PF07963 Prokaryotic N-terminal methylation motif OM948_17555 PF11612 Type II secretion system (T2SS), protein J OM948_17560 PF02501 Type II secretion system (T2SS), protein I OM948_17560 PF07963 Prokaryotic N-terminal methylation motif OM948_17565 PF07963 Prokaryotic N-terminal methylation motif OM948_17565 PF12019 Type II transport protein GspH OM948_17570 PF08334 Type II secretion system (T2SS), protein G OM948_17570 PF07963 Prokaryotic N-terminal methylation motif OM948_17575 PF00482 Type II secretion system (T2SS), protein F OM948_17580 PF00437 Type II/IV secretion system protein OM948_17585 PF03958 Bacterial type II/III secretion system short domain OM948_17585 PF00263 Bacterial type II and III secretion system protein OM948_17630 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) OM948_17635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_17635 PF00512 His Kinase A (phospho-acceptor) domain OM948_17640 PF00072 Response regulator receiver domain OM948_17645 PF01590 GAF domain OM948_17645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_17645 PF00512 His Kinase A (phospho-acceptor) domain OM948_17645 PF08446 PAS fold OM948_17645 PF00360 Phytochrome region OM948_17650 PF04972 BON domain OM948_17655 PF01408 Oxidoreductase family, NAD-binding Rossmann fold OM948_17655 PF02894 Oxidoreductase family, C-terminal alpha/beta domain OM948_17660 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain OM948_17660 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase OM948_17695 PF00293 NUDIX domain OM948_17695 PF01467 Cytidylyltransferase-like OM948_17705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM948_17705 PF03466 LysR substrate binding domain OM948_17715 PF11818 C-terminal domain of tail specific protease (DUF3340) OM948_17715 PF00595 PDZ domain OM948_17715 PF03572 Peptidase family S41 OM948_17715 PF17804 Tail specific protease N-terminal domain OM948_17720 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family OM948_17720 PF04055 Radical SAM superfamily OM948_17725 PF03099 Biotin/lipoate A/B protein ligase family OM948_17730 PF04359 Protein of unknown function (DUF493) OM948_17740 PF07943 Penicillin-binding protein 5, C-terminal domain OM948_17740 PF00768 D-alanyl-D-alanine carboxypeptidase OM948_17745 PF03330 Lytic transglycolase OM948_17745 PF05036 Sporulation related domain OM948_17750 PF13406 Transglycosylase SLT domain OM948_17755 PF00295 Glycosyl hydrolases family 28 OM948_17760 PF01098 Cell cycle protein OM948_17765 PF03717 Penicillin-binding Protein dimerisation domain OM948_17765 PF00905 Penicillin binding protein transpeptidase domain OM948_17775 PF04085 rod shape-determining protein MreC OM948_17785 PF00294 pfkB family carbohydrate kinase OM948_17790 PF01590 GAF domain OM948_17790 PF02954 Bacterial regulatory protein, Fis family OM948_17790 PF00158 Sigma-54 interaction domain OM948_17800 PF08240 Alcohol dehydrogenase GroES-like domain OM948_17800 PF00107 Zinc-binding dehydrogenase OM948_17815 PF00497 Bacterial extracellular solute-binding proteins, family 3 OM948_17820 PF13360 PQQ-like domain OM948_17835 PF11838 ERAP1-like C-terminal domain OM948_17835 PF01433 Peptidase family M1 domain OM948_17840 PF00563 EAL domain OM948_17840 PF03707 Bacterial signalling protein N terminal repeat OM948_17840 PF00990 Diguanylate cyclase, GGDEF domain OM948_17845 PF01209 ubiE/COQ5 methyltransferase family OM948_17855 PF13533 Biotin-lipoyl like OM948_17860 PF13673 Acetyltransferase (GNAT) domain OM948_17870 PF00004 ATPase family associated with various cellular activities (AAA) OM948_17870 PF07724 AAA domain (Cdc48 subfamily) OM948_17870 PF10431 C-terminal, D2-small domain, of ClpB protein OM948_17875 PF00227 Proteasome subunit OM948_17880 PF02899 Phage integrase, N-terminal SAM-like domain OM948_17880 PF00589 Phage integrase family OM948_17890 PF01678 Diaminopimelate epimerase OM948_17900 PF04304 Protein of unknown function (DUF454) OM948_17905 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain OM948_17905 PF00326 Prolyl oligopeptidase family OM948_17910 PF00155 Aminotransferase class I and II OM948_17915 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain OM948_17915 PF00326 Prolyl oligopeptidase family OM948_17940 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain OM948_17940 PF03900 Porphobilinogen deaminase, C-terminal domain OM948_17945 PF04397 LytTr DNA-binding domain OM948_17945 PF00072 Response regulator receiver domain OM948_17950 PF07694 5TMR of 5TMR-LYT OM948_17950 PF06580 Histidine kinase OM948_17960 PF13632 Glycosyl transferase family group 2 OM948_17970 PF00990 Diguanylate cyclase, GGDEF domain OM948_17975 PF01740 STAS domain OM948_17975 PF00916 Sulfate permease family OM948_17980 PF00553 Cellulose binding domain OM948_17980 PF00150 Cellulase (glycosyl hydrolase family 5) OM948_17985 PF00672 HAMP domain OM948_17985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM948_17985 PF02203 Tar ligand binding domain homologue OM948_17995 PF00563 EAL domain OM948_17995 PF03707 Bacterial signalling protein N terminal repeat OM948_17995 PF00990 Diguanylate cyclase, GGDEF domain OM948_18020 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain OM948_18020 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain OM948_18030 PF01204 Trehalase OM948_18040 PF01544 CorA-like Mg2+ transporter protein OM948_18050 PF00324 Amino acid permease OM948_18060 PF00497 Bacterial extracellular solute-binding proteins, family 3 OM948_18065 PF00892 EamA-like transporter family OM948_18095 PF07759 Protein of unknown function (DUF1615) OM948_18100 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region OM948_18100 PF00326 Prolyl oligopeptidase family OM948_18135 PF13409 Glutathione S-transferase, N-terminal domain OM948_18145 PF00106 short chain dehydrogenase OM948_18160 PF00106 short chain dehydrogenase OM948_18180 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation OM948_18180 PF14508 Glycosyl-hydrolase 97 N-terminal OM948_18180 PF10566 Glycoside hydrolase 97 OM948_18300 PF17831 Pyruvate dehydrogenase E1 component middle domain OM948_18300 PF00456 Transketolase, thiamine diphosphate binding domain OM948_18305 PF07745 Glycosyl hydrolase family 53 OM948_18340 PF00392 Bacterial regulatory proteins, gntR family OM948_18340 PF07729 FCD domain OM948_18350 PF00698 Acyl transferase domain OM948_18360 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase OM948_18365 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG OM948_18375 PF01039 Carboxyl transferase domain OM948_18380 PF06857 Malonate decarboxylase delta subunit (MdcD) OM948_18385 PF16957 Malonate decarboxylase, alpha subunit, transporter OM948_18400 PF00328 Histidine phosphatase superfamily (branch 2) OM948_18405 PF04264 YceI-like domain OM948_18410 PF00881 Nitroreductase family OM948_18435 PF02592 Putative vitamin uptake transporter OM948_18440 PF08335 GlnD PII-uridylyltransferase OM948_18440 PF03710 Glutamate-ammonia ligase adenylyltransferase OM948_18450 PF08450 SMP-30/Gluconolactonase/LRE-like region OM948_18465 PF00793 DAHP synthetase I family OM948_18470 PF07715 TonB-dependent Receptor Plug Domain OM948_18470 PF00593 TonB dependent receptor OM948_18480 PF00118 TCP-1/cpn60 chaperonin family OM948_18485 PF00166 Chaperonin 10 Kd subunit OM948_18490 PF04231 Endonuclease I OM948_18500 PF03091 CutA1 divalent ion tolerance protein OM948_18505 PF11412 Disulphide bond corrector protein DsbC OM948_18505 PF02683 Cytochrome C biogenesis protein transmembrane region OM948_18510 PF01220 Dehydroquinase class II OM948_18515 PF00364 Biotin-requiring enzyme OM948_18525 PF02785 Biotin carboxylase C-terminal domain OM948_18525 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain OM948_18525 PF00289 Biotin carboxylase, N-terminal domain OM948_18550 PF01381 Helix-turn-helix OM948_18565 PF02954 Bacterial regulatory protein, Fis family OM948_18595 PF00782 Dual specificity phosphatase, catalytic domain OM948_18600 PF12147 Putative methyltransferase OM948_18600 PF12146 Serine aminopeptidase, S33 OM948_18605 PF01066 CDP-alcohol phosphatidyltransferase OM948_18610 PF01808 AICARFT/IMPCHase bienzyme OM948_18610 PF02142 MGS-like domain OM948_18620 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain OM948_18620 PF02843 Phosphoribosylglycinamide synthetase, C domain OM948_18620 PF02844 Phosphoribosylglycinamide synthetase, N domain OM948_18625 PF12805 FUSC-like inner membrane protein yccS OM948_18630 PF07690 Major Facilitator Superfamily OM948_18635 PF03466 LysR substrate binding domain OM948_18635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM948_18640 PF07690 Major Facilitator Superfamily OM948_18655 PF03186 CobD/Cbib protein OM948_18655 PF17113 Regulatory signalling modulator protein AmpE OM948_18660 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain OM948_18660 PF00293 NUDIX domain OM948_18660 PF09297 NADH pyrophosphatase zinc ribbon domain OM948_18670 PF01521 Iron-sulphur cluster biosynthesis OM948_18690 PF00072 Response regulator receiver domain OM948_18690 PF00486 Transcriptional regulatory protein, C terminal OM948_18695 PF00072 Response regulator receiver domain OM948_18695 PF01627 Hpt domain OM948_18695 PF00512 His Kinase A (phospho-acceptor) domain OM948_18695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_18695 PF00672 HAMP domain OM948_18695 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) OM948_18700 PF00210 Ferritin-like domain OM948_18710 PF00293 NUDIX domain OM948_18725 PF00380 Ribosomal protein S9/S16 OM948_18730 PF00572 Ribosomal protein L13 OM948_18735 PF03232 Ubiquinone biosynthesis protein COQ7 OM948_18740 PF00893 Small Multidrug Resistance protein OM948_18745 PF02675 S-adenosylmethionine decarboxylase OM948_18750 PF00027 Cyclic nucleotide-binding domain OM948_18750 PF00325 Bacterial regulatory proteins, crp family OM948_18760 PF00218 Indole-3-glycerol phosphate synthase OM948_18765 PF00591 Glycosyl transferase family, a/b domain OM948_18765 PF02885 Glycosyl transferase family, helical bundle domain OM948_18775 PF00117 Glutamine amidotransferase class-I OM948_18790 PF00425 chorismate binding enzyme OM948_18790 PF04715 Anthranilate synthase component I, N terminal region OM948_18795 PF00781 Diacylglycerol kinase catalytic domain OM948_18800 PF00583 Acetyltransferase (GNAT) family OM948_18805 PF00834 Ribulose-phosphate 3 epimerase family OM948_18815 PF00226 DnaJ domain OM948_18815 PF05099 Tellurite resistance protein TerB OM948_18820 PF01259 SAICAR synthetase OM948_18830 PF02868 Thermolysin metallopeptidase, alpha-helical domain OM948_18830 PF07504 Fungalysin/Thermolysin Propeptide Motif OM948_18830 PF01483 Proprotein convertase P-domain OM948_18830 PF01447 Thermolysin metallopeptidase, catalytic domain OM948_18845 PF13244 Domain of unknown function (DUF4040) OM948_18845 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter OM948_18845 PF00361 Proton-conducting membrane transporter OM948_18845 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus OM948_18850 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L OM948_18855 PF00361 Proton-conducting membrane transporter OM948_18865 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) OM948_18870 PF03334 Na+/H+ antiporter subunit OM948_18890 PF04209 homogentisate 1,2-dioxygenase OM948_18895 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily OM948_18900 PF01047 MarR family OM948_18920 PF00854 POT family OM948_18925 PF03301 Tryptophan 2,3-dioxygenase OM948_18935 PF00676 Dehydrogenase E1 component OM948_18940 PF02779 Transketolase, pyrimidine binding domain OM948_18940 PF02780 Transketolase, C-terminal domain OM948_18950 PF00364 Biotin-requiring enzyme OM948_18950 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) OM948_18955 PF00271 Helicase conserved C-terminal domain OM948_18955 PF00270 DEAD/DEAH box helicase OM948_18970 PF00873 AcrB/AcrD/AcrF family OM948_18985 PF02321 Outer membrane efflux protein OM948_18990 PF06903 VirK protein OM948_19005 PF13460 NAD(P)H-binding OM948_19010 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) OM948_19010 PF00128 Alpha amylase, catalytic domain OM948_19020 PF00128 Alpha amylase, catalytic domain OM948_19025 PF02446 4-alpha-glucanotransferase OM948_19030 PF00128 Alpha amylase, catalytic domain OM948_19030 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) OM948_19030 PF11941 Domain of unknown function (DUF3459) OM948_19035 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) OM948_19035 PF00128 Alpha amylase, catalytic domain OM948_19035 PF02806 Alpha amylase, C-terminal all-beta domain OM948_19040 PF08323 Starch synthase catalytic domain OM948_19040 PF00534 Glycosyl transferases group 1 OM948_19045 PF00990 Diguanylate cyclase, GGDEF domain OM948_19050 PF05661 Protein of unknown function (DUF808) OM948_19055 PF03109 ABC1 family OM948_19060 PF00884 Sulfatase OM948_19065 PF00924 Mechanosensitive ion channel OM948_19065 PF12795 Mechanosensitive ion channel porin domain OM948_19065 PF12794 Mechanosensitive ion channel inner membrane domain 1 OM948_19080 PF01464 Transglycosylase SLT domain OM948_19095 PF01311 Bacterial export proteins, family 1 OM948_19105 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain OM948_19105 PF18269 T3SS EscN ATPase C-terminal domain OM948_19105 PF02874 ATP synthase alpha/beta family, beta-barrel domain OM948_19120 PF01514 Secretory protein of YscJ/FliF family OM948_19135 PF01312 FlhB HrpN YscU SpaS Family OM948_19140 PF00771 FHIPEP family OM948_19155 PF00813 FliP family OM948_19160 PF01313 Bacterial export proteins, family 3 OM948_19200 PF00872 Transposase, Mutator family OM948_19205 PF05819 NolX protein OM948_19220 PF01040 UbiA prenyltransferase family OM948_19230 PF04055 Radical SAM superfamily OM948_19230 PF06968 Biotin and Thiamin Synthesis associated domain OM948_19235 PF00155 Aminotransferase class I and II OM948_19245 PF12697 Alpha/beta hydrolase family OM948_19255 PF13649 Methyltransferase domain OM948_19275 PF00291 Pyridoxal-phosphate dependent enzyme OM948_19285 PF13932 GidA associated domain OM948_19285 PF01134 Glucose inhibited division protein A OM948_19290 PF10677 Protein of unknown function (DUF2490) OM948_19295 PF07859 alpha/beta hydrolase fold OM948_19305 PF01614 Bacterial transcriptional regulator OM948_19305 PF09339 IclR helix-turn-helix domain OM948_19315 PF02627 Carboxymuconolactone decarboxylase family OM948_19320 PF12146 Serine aminopeptidase, S33 OM948_19325 PF10397 Adenylosuccinate lyase C-terminus OM948_19325 PF00206 Lyase OM948_19335 PF00775 Dioxygenase OM948_19335 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal OM948_19340 PF02803 Thiolase, C-terminal domain OM948_19340 PF00108 Thiolase, N-terminal domain OM948_19345 PF01144 Coenzyme A transferase OM948_19350 PF01144 Coenzyme A transferase OM948_19355 PF00355 Rieske [2Fe-2S] domain OM948_19360 PF00970 Oxidoreductase FAD-binding domain OM948_19360 PF00111 2Fe-2S iron-sulfur cluster binding domain OM948_19365 PF00455 DeoR C terminal sensor domain OM948_19365 PF08220 DeoR-like helix-turn-helix domain OM948_19370 PF01266 FAD dependent oxidoreductase OM948_19370 PF16901 C-terminal domain of alpha-glycerophosphate oxidase OM948_19375 PF00230 Major intrinsic protein OM948_19380 PF02782 FGGY family of carbohydrate kinases, C-terminal domain OM948_19380 PF00370 FGGY family of carbohydrate kinases, N-terminal domain OM948_19390 PF01494 FAD binding domain OM948_19400 PF00171 Aldehyde dehydrogenase family OM948_19420 PF11871 Domain of unknown function (DUF3391) OM948_19420 PF01966 HD domain OM948_19425 PF07690 Major Facilitator Superfamily OM948_19435 PF00132 Bacterial transferase hexapeptide (six repeats) OM948_19440 PF03692 Putative zinc- or iron-chelating domain OM948_19450 PF00920 Dehydratase family OM948_19485 PF01638 HxlR-like helix-turn-helix OM948_19490 PF05368 NmrA-like family OM948_19500 PF03812 2-keto-3-deoxygluconate permease OM948_19505 PF08267 Cobalamin-independent synthase, N-terminal domain OM948_19505 PF01717 Cobalamin-independent synthase, Catalytic domain OM948_19515 PF03358 NADPH-dependent FMN reductase OM948_19520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM948_19520 PF03466 LysR substrate binding domain OM948_19525 PF02677 Epoxyqueuosine reductase QueH OM948_19540 PF08139 Prokaryotic membrane lipoprotein lipid attachment site OM948_19540 PF02321 Outer membrane efflux protein OM948_19550 PF00529 HlyD membrane-fusion protein of T1SS OM948_19550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OM948_19555 PF00672 HAMP domain OM948_19555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_19555 PF00512 His Kinase A (phospho-acceptor) domain OM948_19560 PF00072 Response regulator receiver domain OM948_19560 PF00486 Transcriptional regulatory protein, C terminal OM948_19565 PF00551 Formyl transferase OM948_19575 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase OM948_19575 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase OM948_19580 PF00724 NADH:flavin oxidoreductase / NADH oxidase family OM948_19585 PF02146 Sir2 family OM948_19590 PF00561 alpha/beta hydrolase fold OM948_19590 PF08386 TAP-like protein OM948_19600 PF07690 Major Facilitator Superfamily OM948_19605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM948_19605 PF03466 LysR substrate binding domain OM948_19615 PF01026 TatD related DNase OM948_19620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM948_19620 PF03466 LysR substrate binding domain OM948_19625 PF00355 Rieske [2Fe-2S] domain OM948_19630 PF00111 2Fe-2S iron-sulfur cluster binding domain OM948_19635 PF00860 Permease family OM948_19645 PF01156 Inosine-uridine preferring nucleoside hydrolase OM948_19650 PF01425 Amidase OM948_19665 PF00561 alpha/beta hydrolase fold OM948_19670 PF03466 LysR substrate binding domain OM948_19670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM948_19675 PF01546 Peptidase family M20/M25/M40 OM948_19675 PF07687 Peptidase dimerisation domain OM948_19680 PF00266 Aminotransferase class-V OM948_19695 PF01014 Uricase OM948_19695 PF09349 OHCU decarboxylase OM948_19700 PF13454 FAD-NAD(P)-binding OM948_19705 PF00576 HIUase/Transthyretin family OM948_19710 PF07308 Protein of unknown function (DUF1456) OM948_19715 PF08482 ATP-dependent helicase C-terminal OM948_19715 PF00271 Helicase conserved C-terminal domain OM948_19715 PF04408 Helicase associated domain (HA2) OM948_19715 PF00270 DEAD/DEAH box helicase OM948_19725 PF00593 TonB dependent receptor OM948_19730 PF00849 RNA pseudouridylate synthase OM948_19740 PF00248 Aldo/keto reductase family OM948_19745 PF16884 N-terminal domain of oxidoreductase OM948_19745 PF00107 Zinc-binding dehydrogenase OM948_19770 PF02566 OsmC-like protein OM948_19775 PF01047 MarR family OM948_19780 PF03969 AFG1-like ATPase OM948_19800 PF02492 CobW/HypB/UreG, nucleotide-binding domain OM948_19800 PF07683 Cobalamin synthesis protein cobW C-terminal domain OM948_19855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OM948_19855 PF02770 Acyl-CoA dehydrogenase, middle domain OM948_19855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OM948_19860 PF01039 Carboxyl transferase domain OM948_19865 PF18140 Propionyl-coenzyme A carboxylase BT domain OM948_19865 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain OM948_19865 PF00364 Biotin-requiring enzyme OM948_19865 PF00289 Biotin carboxylase, N-terminal domain OM948_19865 PF02785 Biotin carboxylase C-terminal domain OM948_19870 PF00326 Prolyl oligopeptidase family OM948_19890 PF00990 Diguanylate cyclase, GGDEF domain OM948_19895 PF00463 Isocitrate lyase family OM948_19900 PF01274 Malate synthase OM948_19905 PF03466 LysR substrate binding domain OM948_19905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM948_19910 PF00999 Sodium/hydrogen exchanger family OM948_19915 PF12833 Helix-turn-helix domain OM948_19940 PF12706 Beta-lactamase superfamily domain OM948_19945 PF00106 short chain dehydrogenase OM948_19950 PF01432 Peptidase family M3 OM948_19955 PF01112 Asparaginase OM948_19965 PF00472 RF-1 domain OM948_19975 PF00849 RNA pseudouridylate synthase OM948_19985 PF03109 ABC1 family OM948_20010 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family OM948_20015 PF00144 Beta-lactamase OM948_20020 PF00486 Transcriptional regulatory protein, C terminal OM948_20020 PF00072 Response regulator receiver domain OM948_20025 PF00501 AMP-binding enzyme OM948_20030 PF03692 Putative zinc- or iron-chelating domain OM948_20035 PF00561 alpha/beta hydrolase fold OM948_20040 PF02661 Fic/DOC family OM948_20040 PF13784 Fic/DOC family N-terminal OM948_20045 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III OM948_20045 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal OM948_20060 PF00588 SpoU rRNA Methylase family OM948_20065 PF07690 Major Facilitator Superfamily OM948_20080 PF02954 Bacterial regulatory protein, Fis family OM948_20080 PF00072 Response regulator receiver domain OM948_20080 PF00158 Sigma-54 interaction domain OM948_20085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_20090 PF00205 Thiamine pyrophosphate enzyme, central domain OM948_20090 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain OM948_20090 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain OM948_20105 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus OM948_20105 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus OM948_20110 PF02556 Preprotein translocase subunit SecB OM948_20115 PF00581 Rhodanese-like domain OM948_20150 PF02803 Thiolase, C-terminal domain OM948_20150 PF00108 Thiolase, N-terminal domain OM948_20160 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily OM948_20165 PF00080 Copper/zinc superoxide dismutase (SODC) OM948_20170 PF00080 Copper/zinc superoxide dismutase (SODC) OM948_20175 PF02954 Bacterial regulatory protein, Fis family OM948_20175 PF00072 Response regulator receiver domain OM948_20175 PF00158 Sigma-54 interaction domain OM948_20180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_20180 PF00512 His Kinase A (phospho-acceptor) domain OM948_20180 PF00989 PAS fold OM948_20190 PF00909 Ammonium Transporter Family OM948_20195 PF00543 Nitrogen regulatory protein P-II OM948_20200 PF00120 Glutamine synthetase, catalytic domain OM948_20200 PF03951 Glutamine synthetase, beta-Grasp domain OM948_20205 PF02673 Bacitracin resistance protein BacA OM948_20215 PF08240 Alcohol dehydrogenase GroES-like domain OM948_20215 PF00107 Zinc-binding dehydrogenase OM948_20245 PF03061 Thioesterase superfamily OM948_20250 PF13091 PLD-like domain OM948_20265 PF01883 Iron-sulfur cluster assembly protein OM948_20265 PF10609 NUBPL iron-transfer P-loop NTPase OM948_20295 PF12867 DinB superfamily OM948_20295 PF03781 Sulfatase-modifying factor enzyme 1 OM948_20305 PF00528 Binding-protein-dependent transport system inner membrane component OM948_20310 PF00005 ABC transporter OM948_20325 PF00005 ABC transporter OM948_20335 PF01734 Patatin-like phospholipase OM948_20340 PF07715 TonB-dependent Receptor Plug Domain OM948_20340 PF00593 TonB dependent receptor OM948_20340 PF07660 Secretin and TonB N terminus short domain OM948_20345 PF01037 Lrp/AsnC ligand binding domain OM948_20350 PF00351 Biopterin-dependent aromatic amino acid hydroxylase OM948_20360 PF00657 GDSL-like Lipase/Acylhydrolase OM948_20375 PF04962 KduI/IolB family OM948_20380 PF00356 Bacterial regulatory proteins, lacI family OM948_20385 PF04616 Glycosyl hydrolases family 43 OM948_20385 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain OM948_20390 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component OM948_20400 PF03480 Bacterial extracellular solute-binding protein, family 7 OM948_20410 PF13472 GDSL-like Lipase/Acylhydrolase family OM948_20410 PF07859 alpha/beta hydrolase fold OM948_20415 PF00135 Carboxylesterase family OM948_20420 PF00248 Aldo/keto reductase family OM948_20430 PF00128 Alpha amylase, catalytic domain OM948_20430 PF02806 Alpha amylase, C-terminal all-beta domain OM948_20430 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) OM948_20435 PF16657 Maltogenic Amylase, C-terminal domain OM948_20435 PF00128 Alpha amylase, catalytic domain OM948_20440 PF11896 Domain of unknown function (DUF3416) OM948_20440 PF00128 Alpha amylase, catalytic domain OM948_20485 PF02540 NAD synthase OM948_20485 PF00795 Carbon-nitrogen hydrolase OM948_20585 PF00294 pfkB family carbohydrate kinase OM948_20595 PF12241 Trans-2-enoyl-CoA reductase catalytic region OM948_20595 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase OM948_20595 PF07055 Enoyl reductase FAD binding domain OM948_20620 PF00196 Bacterial regulatory proteins, luxR family OM948_20620 PF00072 Response regulator receiver domain OM948_20625 PF07730 Histidine kinase OM948_20630 PF00144 Beta-lactamase OM948_20635 PF01070 FMN-dependent dehydrogenase OM948_20640 PF02735 Ku70/Ku80 beta-barrel domain OM948_20660 PF00171 Aldehyde dehydrogenase family OM948_20675 PF07715 TonB-dependent Receptor Plug Domain OM948_20675 PF00593 TonB dependent receptor OM948_20680 PF00155 Aminotransferase class I and II OM948_20685 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain OM948_20725 PF17863 AAA lid domain OM948_20725 PF07726 ATPase family associated with various cellular activities (AAA) OM948_20765 PF08946 Osmosensory transporter coiled coil OM948_20765 PF00083 Sugar (and other) transporter OM948_20770 PF00085 Thioredoxin OM948_20795 PF01447 Thermolysin metallopeptidase, catalytic domain OM948_20795 PF02868 Thermolysin metallopeptidase, alpha-helical domain OM948_20795 PF16485 Protealysin propeptide OM948_20815 PF05532 CsbD-like OM948_20835 PF02525 Flavodoxin-like fold OM948_20850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM948_20850 PF03466 LysR substrate binding domain OM948_20860 PF00106 short chain dehydrogenase OM948_20880 PF03006 Haemolysin-III related OM948_20885 PF00270 DEAD/DEAH box helicase OM948_20885 PF09369 Domain of unknown function (DUF1998) OM948_20885 PF00271 Helicase conserved C-terminal domain OM948_20930 PF00872 Transposase, Mutator family OM948_20970 PF04898 Glutamate synthase central domain OM948_20970 PF01645 Conserved region in glutamate synthase OM948_20970 PF01493 GXGXG motif OM948_20970 PF00310 Glutamine amidotransferases class-II OM948_20975 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster OM948_20975 PF07992 Pyridine nucleotide-disulphide oxidoreductase OM948_20990 PF08240 Alcohol dehydrogenase GroES-like domain OM948_20990 PF00107 Zinc-binding dehydrogenase OM948_20995 PF00150 Cellulase (glycosyl hydrolase family 5) OM948_21005 PF00150 Cellulase (glycosyl hydrolase family 5) OM948_21010 PF00150 Cellulase (glycosyl hydrolase family 5) OM948_21030 PF01551 Peptidase family M23 OM948_21035 PF13180 PDZ domain OM948_21035 PF03572 Peptidase family S41 OM948_21040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain OM948_21040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain OM948_21055 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) OM948_21065 PF04055 Radical SAM superfamily OM948_21080 PF13396 Phospholipase_D-nuclease N-terminal OM948_21080 PF13091 PLD-like domain OM948_21090 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ OM948_21095 PF02472 Biopolymer transport protein ExbD/TolR OM948_21100 PF02472 Biopolymer transport protein ExbD/TolR OM948_21105 PF02472 Biopolymer transport protein ExbD/TolR OM948_21110 PF01618 MotA/TolQ/ExbB proton channel family OM948_21115 PF03544 Gram-negative bacterial TonB protein C-terminal OM948_21125 PF01435 Peptidase family M48 OM948_21135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_21135 PF01751 Toprim domain OM948_21135 PF00986 DNA gyrase B subunit, carboxyl terminus OM948_21135 PF00204 DNA gyrase B OM948_21135 PF18053 DNA gyrase B subunit insert domain OM948_21140 PF02463 RecF/RecN/SMC N terminal domain OM948_21145 PF00712 DNA polymerase III beta subunit, N-terminal domain OM948_21145 PF02767 DNA polymerase III beta subunit, central domain OM948_21145 PF02768 DNA polymerase III beta subunit, C-terminal domain OM948_21150 PF11638 DnaA N-terminal domain OM948_21150 PF00308 Bacterial dnaA protein OM948_21150 PF08299 Bacterial dnaA protein helix-turn-helix OM948_21155 PF00468 Ribosomal protein L34 OM948_21160 PF00825 Ribonuclease P OM948_21165 PF02096 60Kd inner membrane protein OM948_21165 PF14849 YidC periplasmic domain OM948_21180 PF01926 50S ribosome-binding GTPase OM948_21180 PF12631 MnmE helical domain OM948_21180 PF10396 GTP-binding protein TrmE N-terminus OM948_21185 PF01569 PAP2 superfamily OM948_21195 PF03009 Glycerophosphoryl diester phosphodiesterase family OM948_21200 PF01694 Rhomboid family OM948_21205 PF03741 Integral membrane protein TerC family OM948_21210 PF10672 S-adenosylmethionine-dependent methyltransferase OM948_21210 PF17785 PUA-like domain OM948_21240 PF13556 PucR C-terminal helix-turn-helix domain OM948_21240 PF05651 Putative sugar diacid recognition OM948_21240 PF17853 GGDEF-like domain OM948_21245 PF00990 Diguanylate cyclase, GGDEF domain OM948_21250 PF10947 Protein of unknown function (DUF2628) OM948_21255 PF07971 Glycosyl hydrolase family 92 OM948_21255 PF17678 Glycosyl hydrolase family 92 N-terminal domain OM948_21260 PF13520 Amino acid permease OM948_21270 PF13417 Glutathione S-transferase, N-terminal domain OM948_21270 PF00043 Glutathione S-transferase, C-terminal domain OM948_21280 PF02646 RmuC family OM948_21290 PF00255 Glutathione peroxidase OM948_21300 PF04333 MlaA lipoprotein OM948_21310 PF05494 MlaC protein OM948_21315 PF02470 MlaD protein OM948_21320 PF02405 Permease MlaE OM948_21325 PF00005 ABC transporter OM948_21360 PF17946 RecC C-terminal domain OM948_21365 PF12705 PD-(D/E)XK nuclease superfamily OM948_21365 PF00580 UvrD/REP helicase N-terminal domain OM948_21365 PF13361 UvrD-like helicase C-terminal domain OM948_21370 PF13538 UvrD-like helicase C-terminal domain OM948_21445 PF00849 RNA pseudouridylate synthase OM948_21510 PF13396 Phospholipase_D-nuclease N-terminal OM948_21510 PF13091 PLD-like domain OM948_21515 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family OM948_21520 PF00106 short chain dehydrogenase OM948_21525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM948_21525 PF03466 LysR substrate binding domain OM948_21535 PF00083 Sugar (and other) transporter OM948_21540 PF04632 Fusaric acid resistance protein family OM948_21545 PF02321 Outer membrane efflux protein OM948_21550 PF00529 HlyD membrane-fusion protein of T1SS OM948_21550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OM948_21555 PF07869 Protein of unknown function (DUF1656) OM948_21565 PF01227 GTP cyclohydrolase I OM948_21585 PF01925 Sulfite exporter TauE/SafE OM948_21590 PF02810 SEC-C motif OM948_21600 PF01263 Aldose 1-epimerase OM948_21605 PF07690 Major Facilitator Superfamily OM948_21610 PF01126 Heme oxygenase OM948_21615 PF01590 GAF domain OM948_21615 PF08446 PAS fold OM948_21615 PF13426 PAS domain OM948_21615 PF00360 Phytochrome region OM948_21620 PF03594 Benzoate membrane transport protein OM948_21650 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain OM948_21650 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain OM948_21650 PF06827 Zinc finger found in FPG and IleRS OM948_21660 PF04349 Periplasmic glucan biosynthesis protein, MdoG OM948_21665 PF01590 GAF domain OM948_21665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM948_21665 PF00512 His Kinase A (phospho-acceptor) domain OM948_21665 PF00360 Phytochrome region OM948_21665 PF08446 PAS fold OM948_21670 PF00265 Thymidine kinase OM948_21675 PF00580 UvrD/REP helicase N-terminal domain OM948_21675 PF13361 UvrD-like helicase C-terminal domain OM948_21680 PF13302 Acetyltransferase (GNAT) domain OM948_21690 PF04337 Protein of unknown function, DUF480 OM948_21695 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) OM948_21700 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family OM948_21705 PF04820 Tryptophan halogenase OM948_21720 PF00356 Bacterial regulatory proteins, lacI family OM948_21730 PF01553 Acyltransferase OM948_21735 PF00550 Phosphopantetheine attachment site OM948_21735 PF00107 Zinc-binding dehydrogenase OM948_21735 PF02801 Beta-ketoacyl synthase, C-terminal domain OM948_21735 PF08240 Alcohol dehydrogenase GroES-like domain OM948_21735 PF00698 Acyl transferase domain OM948_21735 PF08659 KR domain OM948_21735 PF16197 Ketoacyl-synthetase C-terminal extension OM948_21735 PF00109 Beta-ketoacyl synthase, N-terminal domain OM948_21735 PF14765 Polyketide synthase dehydratase OM948_21750 PF17191 RecG wedge domain OM948_21750 PF13749 Putative ATP-dependent DNA helicase recG C-terminal OM948_21750 PF00270 DEAD/DEAH box helicase OM948_21780 PF04616 Glycosyl hydrolases family 43 OM948_21800 PF03422 Carbohydrate binding module (family 6) OM948_21800 PF00331 Glycosyl hydrolase family 10 OM948_21800 PF00553 Cellulose binding domain OM948_21820 PF02614 Glucuronate isomerase OM948_21825 PF02837 Glycosyl hydrolases family 2, sugar binding domain OM948_21825 PF00703 Glycosyl hydrolases family 2 OM948_21825 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 OM948_21825 PF16355 Domain of unknown function (DUF4982) OM948_21825 PF02836 Glycosyl hydrolases family 2, TIM barrel domain OM948_21830 PF00331 Glycosyl hydrolase family 10 OM948_21835 PF08450 SMP-30/Gluconolactonase/LRE-like region OM948_21850 PF02782 FGGY family of carbohydrate kinases, C-terminal domain OM948_21850 PF00370 FGGY family of carbohydrate kinases, N-terminal domain OM948_21860 PF00202 Aminotransferase class-III OM948_21875 PF00171 Aldehyde dehydrogenase family OM948_21905 PF08125 Mannitol dehydrogenase C-terminal domain OM948_21905 PF01232 Mannitol dehydrogenase Rossmann domain OM948_21910 PF14310 Fibronectin type III-like domain OM948_21910 PF00933 Glycosyl hydrolase family 3 N terminal domain OM948_21910 PF01915 Glycosyl hydrolase family 3 C-terminal domain OM948_21910 PF07691 PA14 domain OM948_21915 PF04616 Glycosyl hydrolases family 43 OM948_21915 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain OM948_21920 PF13378 Enolase C-terminal domain-like OM948_21920 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain OM948_21930 PF07477 Glycosyl hydrolase family 67 C-terminus OM948_21930 PF07488 Glycosyl hydrolase family 67 middle domain OM948_21930 PF03648 Glycosyl hydrolase family 67 N-terminus OM948_21935 PF00356 Bacterial regulatory proteins, lacI family OM948_21945 PF01171 PP-loop family OM948_21950 PF04381 Putative exonuclease, RdgC OM948_21960 PF12697 Alpha/beta hydrolase family OM948_21965 PF00762 Ferrochelatase OM948_21975 PF02416 mttA/Hcf106 family OM948_21980 PF02416 mttA/Hcf106 family OM948_21985 PF00902 Sec-independent protein translocase protein (TatC) OM948_21995 PF00117 Glutamine amidotransferase class-I OM948_21995 PF00958 GMP synthase C terminal domain OM948_22015 PF01464 Transglycosylase SLT domain OM948_22070 PF02661 Fic/DOC family OM948_22070 PF17841 BID domain of Bartonella effector protein (Bep) OM948_22105 PF02796 Helix-turn-helix domain of resolvase OM948_22105 PF00239 Resolvase, N terminal domain OM948_22150 PF13614 AAA domain OM948_22155 PF06613 KorB C-terminal beta-barrel domain OM948_22155 PF02195 ParB-like nuclease domain OM948_22155 PF08535 KorB domain OM948_22175 PF00691 OmpA family OM948_22190 PF02534 Type IV secretory system Conjugative DNA transfer OM948_22195 PF00437 Type II/IV secretion system protein OM948_22200 PF03743 Bacterial conjugation TrbI-like protein OM948_22205 PF03524 Conjugal transfer protein OM948_22210 PF04335 VirB8 protein OM948_22215 PF08139 Prokaryotic membrane lipoprotein lipid attachment site OM948_22220 PF04610 TrbL/VirB6 plasmid conjugal transfer protein OM948_22230 PF07996 Type IV secretion system proteins OM948_22235 PF03135 CagE, TrbE, VirB family, component of type IV transporter system OM948_22240 PF03135 CagE, TrbE, VirB family, component of type IV transporter system OM948_22245 PF05101 Type IV secretory pathway, VirB3-like protein OM948_22250 PF04956 TrbC/VIRB2 family OM948_22255 PF00437 Type II/IV secretion system protein OM948_22280 PF00872 Transposase, Mutator family OM948_22300 PF02534 Type IV secretory system Conjugative DNA transfer OM948_22365 PF03377 TAL effector repeat OM948_22425 PF03421 YopJ Serine/Threonine acetyltransferase OM948_22445 PF02796 Helix-turn-helix domain of resolvase OM948_22445 PF00239 Resolvase, N terminal domain OM948_22455 PF01850 PIN domain OM948_22470 PF01131 DNA topoisomerase OM948_22470 PF01751 Toprim domain OM948_22470 PF13368 Topoisomerase C-terminal repeat OM948_22470 PF01396 Topoisomerase DNA binding C4 zinc finger OM948_22485 PF01751 Toprim domain OM948_22485 PF01131 DNA topoisomerase OM948_22505 PF03743 Bacterial conjugation TrbI-like protein OM948_22520 PF04610 TrbL/VirB6 plasmid conjugal transfer protein OM948_22535 PF03135 CagE, TrbE, VirB family, component of type IV transporter system