locus-tag class description OM953_00005 PF00308 Bacterial dnaA protein OM953_00005 PF08299 Bacterial dnaA protein helix-turn-helix OM953_00005 PF11638 DnaA N-terminal domain OM953_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain OM953_00010 PF02767 DNA polymerase III beta subunit, central domain OM953_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain OM953_00015 PF02463 RecF/RecN/SMC N terminal domain OM953_00020 PF00204 DNA gyrase B OM953_00020 PF00986 DNA gyrase B subunit, carboxyl terminus OM953_00020 PF18053 DNA gyrase B subunit insert domain OM953_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_00020 PF01751 Toprim domain OM953_00030 PF01435 Peptidase family M48 OM953_00040 PF03544 Gram-negative bacterial TonB protein C-terminal OM953_00045 PF01618 MotA/TolQ/ExbB proton channel family OM953_00050 PF02472 Biopolymer transport protein ExbD/TolR OM953_00055 PF02472 Biopolymer transport protein ExbD/TolR OM953_00060 PF02472 Biopolymer transport protein ExbD/TolR OM953_00065 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ OM953_00075 PF13091 PLD-like domain OM953_00075 PF13396 Phospholipase_D-nuclease N-terminal OM953_00090 PF04055 Radical SAM superfamily OM953_00100 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) OM953_00115 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain OM953_00115 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain OM953_00120 PF13180 PDZ domain OM953_00120 PF03572 Peptidase family S41 OM953_00125 PF01551 Peptidase family M23 OM953_00135 PF04389 Peptidase family M28 OM953_00145 PF00150 Cellulase (glycosyl hydrolase family 5) OM953_00150 PF00150 Cellulase (glycosyl hydrolase family 5) OM953_00160 PF00150 Cellulase (glycosyl hydrolase family 5) OM953_00165 PF08240 Alcohol dehydrogenase GroES-like domain OM953_00165 PF00107 Zinc-binding dehydrogenase OM953_00180 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster OM953_00180 PF07992 Pyridine nucleotide-disulphide oxidoreductase OM953_00185 PF01493 GXGXG motif OM953_00185 PF00310 Glutamine amidotransferases class-II OM953_00185 PF04898 Glutamate synthase central domain OM953_00185 PF01645 Conserved region in glutamate synthase OM953_00265 PF00271 Helicase conserved C-terminal domain OM953_00265 PF00270 DEAD/DEAH box helicase OM953_00265 PF09369 Domain of unknown function (DUF1998) OM953_00270 PF03006 Haemolysin-III related OM953_00290 PF00106 short chain dehydrogenase OM953_00300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM953_00300 PF03466 LysR substrate binding domain OM953_00315 PF02525 Flavodoxin-like fold OM953_00335 PF05532 CsbD-like OM953_00355 PF16485 Protealysin propeptide OM953_00355 PF02868 Thermolysin metallopeptidase, alpha-helical domain OM953_00355 PF01447 Thermolysin metallopeptidase, catalytic domain OM953_00365 PF13344 Haloacid dehalogenase-like hydrolase OM953_00365 PF00293 NUDIX domain OM953_00380 PF00085 Thioredoxin OM953_00385 PF08946 Osmosensory transporter coiled coil OM953_00385 PF00083 Sugar (and other) transporter OM953_00425 PF07726 ATPase family associated with various cellular activities (AAA) OM953_00425 PF17863 AAA lid domain OM953_00465 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain OM953_00470 PF00155 Aminotransferase class I and II OM953_00475 PF00593 TonB dependent receptor OM953_00475 PF07715 TonB-dependent Receptor Plug Domain OM953_00490 PF00171 Aldehyde dehydrogenase family OM953_00510 PF02735 Ku70/Ku80 beta-barrel domain OM953_00515 PF01070 FMN-dependent dehydrogenase OM953_00520 PF00144 Beta-lactamase OM953_00525 PF07730 Histidine kinase OM953_00530 PF00072 Response regulator receiver domain OM953_00530 PF00196 Bacterial regulatory proteins, luxR family OM953_00550 PF18500 CadC C-terminal domain 1 OM953_00550 PF00486 Transcriptional regulatory protein, C terminal OM953_00555 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase OM953_00555 PF12241 Trans-2-enoyl-CoA reductase catalytic region OM953_00555 PF07055 Enoyl reductase FAD binding domain OM953_00565 PF00294 pfkB family carbohydrate kinase OM953_00665 PF00795 Carbon-nitrogen hydrolase OM953_00665 PF02540 NAD synthase OM953_00710 PF00128 Alpha amylase, catalytic domain OM953_00710 PF11896 Domain of unknown function (DUF3416) OM953_00715 PF00128 Alpha amylase, catalytic domain OM953_00715 PF16657 Maltogenic Amylase, C-terminal domain OM953_00720 PF00128 Alpha amylase, catalytic domain OM953_00720 PF02806 Alpha amylase, C-terminal all-beta domain OM953_00720 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) OM953_00735 PF00248 Aldo/keto reductase family OM953_00740 PF00135 Carboxylesterase family OM953_00745 PF07859 alpha/beta hydrolase fold OM953_00745 PF13472 GDSL-like Lipase/Acylhydrolase family OM953_00755 PF03480 Bacterial extracellular solute-binding protein, family 7 OM953_00765 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component OM953_00770 PF04616 Glycosyl hydrolases family 43 OM953_00770 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain OM953_00775 PF00356 Bacterial regulatory proteins, lacI family OM953_00780 PF04962 KduI/IolB family OM953_00795 PF00657 GDSL-like Lipase/Acylhydrolase OM953_00805 PF00351 Biopterin-dependent aromatic amino acid hydroxylase OM953_00810 PF01037 Lrp/AsnC ligand binding domain OM953_00815 PF00593 TonB dependent receptor OM953_00815 PF07660 Secretin and TonB N terminus short domain OM953_00815 PF07715 TonB-dependent Receptor Plug Domain OM953_00820 PF01734 Patatin-like phospholipase OM953_00830 PF00005 ABC transporter OM953_00845 PF00005 ABC transporter OM953_00850 PF00528 Binding-protein-dependent transport system inner membrane component OM953_00860 PF03781 Sulfatase-modifying factor enzyme 1 OM953_00860 PF12867 DinB superfamily OM953_00890 PF10609 NUBPL iron-transfer P-loop NTPase OM953_00890 PF01883 Iron-sulfur cluster assembly protein OM953_00905 PF13091 PLD-like domain OM953_00910 PF03061 Thioesterase superfamily OM953_00940 PF00107 Zinc-binding dehydrogenase OM953_00940 PF08240 Alcohol dehydrogenase GroES-like domain OM953_00950 PF02673 Bacitracin resistance protein BacA OM953_00955 PF03951 Glutamine synthetase, beta-Grasp domain OM953_00955 PF00120 Glutamine synthetase, catalytic domain OM953_00960 PF00543 Nitrogen regulatory protein P-II OM953_00965 PF00909 Ammonium Transporter Family OM953_00975 PF00512 His Kinase A (phospho-acceptor) domain OM953_00975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_00975 PF00989 PAS fold OM953_00980 PF02954 Bacterial regulatory protein, Fis family OM953_00980 PF00158 Sigma-54 interaction domain OM953_00980 PF00072 Response regulator receiver domain OM953_00985 PF00080 Copper/zinc superoxide dismutase (SODC) OM953_00990 PF00080 Copper/zinc superoxide dismutase (SODC) OM953_00995 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily OM953_01005 PF02803 Thiolase, C-terminal domain OM953_01005 PF00108 Thiolase, N-terminal domain OM953_01040 PF00581 Rhodanese-like domain OM953_01045 PF02556 Preprotein translocase subunit SecB OM953_01050 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus OM953_01050 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus OM953_01065 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain OM953_01065 PF00205 Thiamine pyrophosphate enzyme, central domain OM953_01065 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain OM953_01070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_01075 PF02954 Bacterial regulatory protein, Fis family OM953_01075 PF00158 Sigma-54 interaction domain OM953_01075 PF00072 Response regulator receiver domain OM953_01090 PF07690 Major Facilitator Superfamily OM953_01095 PF00588 SpoU rRNA Methylase family OM953_01110 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III OM953_01110 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal OM953_01115 PF13784 Fic/DOC family N-terminal OM953_01115 PF02661 Fic/DOC family OM953_01120 PF00561 alpha/beta hydrolase fold OM953_01125 PF03692 Putative zinc- or iron-chelating domain OM953_01130 PF00501 AMP-binding enzyme OM953_01135 PF00486 Transcriptional regulatory protein, C terminal OM953_01135 PF00072 Response regulator receiver domain OM953_01140 PF00144 Beta-lactamase OM953_01145 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family OM953_01170 PF03109 ABC1 family OM953_01180 PF00849 RNA pseudouridylate synthase OM953_01190 PF00472 RF-1 domain OM953_01200 PF01112 Asparaginase OM953_01205 PF01432 Peptidase family M3 OM953_01210 PF00106 short chain dehydrogenase OM953_01215 PF12706 Beta-lactamase superfamily domain OM953_01240 PF12833 Helix-turn-helix domain OM953_01245 PF00999 Sodium/hydrogen exchanger family OM953_01250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM953_01250 PF03466 LysR substrate binding domain OM953_01255 PF01274 Malate synthase OM953_01260 PF00463 Isocitrate lyase family OM953_01265 PF00990 Diguanylate cyclase, GGDEF domain OM953_01285 PF00326 Prolyl oligopeptidase family OM953_01290 PF18140 Propionyl-coenzyme A carboxylase BT domain OM953_01290 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain OM953_01290 PF00364 Biotin-requiring enzyme OM953_01290 PF00289 Biotin carboxylase, N-terminal domain OM953_01290 PF02785 Biotin carboxylase C-terminal domain OM953_01295 PF01039 Carboxyl transferase domain OM953_01300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OM953_01300 PF02770 Acyl-CoA dehydrogenase, middle domain OM953_01300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OM953_01355 PF07683 Cobalamin synthesis protein cobW C-terminal domain OM953_01355 PF02492 CobW/HypB/UreG, nucleotide-binding domain OM953_01375 PF03969 AFG1-like ATPase OM953_01380 PF01047 MarR family OM953_01385 PF02566 OsmC-like protein OM953_01410 PF16884 N-terminal domain of oxidoreductase OM953_01410 PF00107 Zinc-binding dehydrogenase OM953_01415 PF00248 Aldo/keto reductase family OM953_01425 PF00849 RNA pseudouridylate synthase OM953_01430 PF00593 TonB dependent receptor OM953_01440 PF00271 Helicase conserved C-terminal domain OM953_01440 PF04408 Helicase associated domain (HA2) OM953_01440 PF00270 DEAD/DEAH box helicase OM953_01440 PF08482 ATP-dependent helicase C-terminal OM953_01445 PF07308 Protein of unknown function (DUF1456) OM953_01450 PF00576 HIUase/Transthyretin family OM953_01455 PF13454 FAD-NAD(P)-binding OM953_01460 PF09349 OHCU decarboxylase OM953_01460 PF01014 Uricase OM953_01475 PF00266 Aminotransferase class-V OM953_01480 PF07687 Peptidase dimerisation domain OM953_01480 PF01546 Peptidase family M20/M25/M40 OM953_01485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM953_01485 PF03466 LysR substrate binding domain OM953_01490 PF00561 alpha/beta hydrolase fold OM953_01505 PF01425 Amidase OM953_01510 PF01156 Inosine-uridine preferring nucleoside hydrolase OM953_01520 PF00860 Permease family OM953_01525 PF00111 2Fe-2S iron-sulfur cluster binding domain OM953_01530 PF00355 Rieske [2Fe-2S] domain OM953_01535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM953_01535 PF03466 LysR substrate binding domain OM953_01540 PF01026 TatD related DNase OM953_01550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM953_01550 PF03466 LysR substrate binding domain OM953_01555 PF07690 Major Facilitator Superfamily OM953_01565 PF00561 alpha/beta hydrolase fold OM953_01565 PF08386 TAP-like protein OM953_01570 PF02146 Sir2 family OM953_01575 PF00724 NADH:flavin oxidoreductase / NADH oxidase family OM953_01580 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase OM953_01580 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase OM953_01590 PF00551 Formyl transferase OM953_01595 PF00072 Response regulator receiver domain OM953_01595 PF00486 Transcriptional regulatory protein, C terminal OM953_01600 PF00672 HAMP domain OM953_01600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_01600 PF00512 His Kinase A (phospho-acceptor) domain OM953_01605 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OM953_01605 PF00529 HlyD membrane-fusion protein of T1SS OM953_01610 PF00873 AcrB/AcrD/AcrF family OM953_01615 PF08139 Prokaryotic membrane lipoprotein lipid attachment site OM953_01615 PF02321 Outer membrane efflux protein OM953_01630 PF02677 Epoxyqueuosine reductase QueH OM953_01635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM953_01635 PF03466 LysR substrate binding domain OM953_01640 PF03358 NADPH-dependent FMN reductase OM953_01650 PF01717 Cobalamin-independent synthase, Catalytic domain OM953_01650 PF08267 Cobalamin-independent synthase, N-terminal domain OM953_01655 PF03812 2-keto-3-deoxygluconate permease OM953_01665 PF05368 NmrA-like family OM953_01670 PF01638 HxlR-like helix-turn-helix OM953_01705 PF00920 Dehydratase family OM953_01715 PF03692 Putative zinc- or iron-chelating domain OM953_01720 PF00132 Bacterial transferase hexapeptide (six repeats) OM953_01730 PF07690 Major Facilitator Superfamily OM953_01735 PF01966 HD domain OM953_01735 PF11871 Domain of unknown function (DUF3391) OM953_01755 PF00171 Aldehyde dehydrogenase family OM953_01765 PF01494 FAD binding domain OM953_01775 PF00370 FGGY family of carbohydrate kinases, N-terminal domain OM953_01775 PF02782 FGGY family of carbohydrate kinases, C-terminal domain OM953_01780 PF00230 Major intrinsic protein OM953_01785 PF16901 C-terminal domain of alpha-glycerophosphate oxidase OM953_01785 PF01266 FAD dependent oxidoreductase OM953_01790 PF00455 DeoR C terminal sensor domain OM953_01790 PF08220 DeoR-like helix-turn-helix domain OM953_01795 PF00111 2Fe-2S iron-sulfur cluster binding domain OM953_01795 PF00970 Oxidoreductase FAD-binding domain OM953_01800 PF00355 Rieske [2Fe-2S] domain OM953_01805 PF01144 Coenzyme A transferase OM953_01810 PF01144 Coenzyme A transferase OM953_01815 PF00108 Thiolase, N-terminal domain OM953_01815 PF02803 Thiolase, C-terminal domain OM953_01820 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal OM953_01820 PF00775 Dioxygenase OM953_01830 PF00206 Lyase OM953_01830 PF10397 Adenylosuccinate lyase C-terminus OM953_01835 PF12146 Serine aminopeptidase, S33 OM953_01840 PF02627 Carboxymuconolactone decarboxylase family OM953_01850 PF09339 IclR helix-turn-helix domain OM953_01850 PF01614 Bacterial transcriptional regulator OM953_01860 PF07859 alpha/beta hydrolase fold OM953_01865 PF10677 Protein of unknown function (DUF2490) OM953_01870 PF01134 Glucose inhibited division protein A OM953_01870 PF13932 GidA associated domain OM953_01880 PF00291 Pyridoxal-phosphate dependent enzyme OM953_01900 PF13649 Methyltransferase domain OM953_01910 PF12697 Alpha/beta hydrolase family OM953_01920 PF00155 Aminotransferase class I and II OM953_01925 PF06968 Biotin and Thiamin Synthesis associated domain OM953_01925 PF04055 Radical SAM superfamily OM953_01935 PF01040 UbiA prenyltransferase family OM953_01950 PF05819 NolX protein OM953_01970 PF03211 Pectate lyase OM953_02000 PF01313 Bacterial export proteins, family 3 OM953_02005 PF00813 FliP family OM953_02020 PF00771 FHIPEP family OM953_02025 PF01312 FlhB HrpN YscU SpaS Family OM953_02040 PF01514 Secretory protein of YscJ/FliF family OM953_02055 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain OM953_02055 PF02874 ATP synthase alpha/beta family, beta-barrel domain OM953_02055 PF18269 T3SS EscN ATPase C-terminal domain OM953_02065 PF01311 Bacterial export proteins, family 1 OM953_02070 PF00263 Bacterial type II and III secretion system protein OM953_02070 PF03958 Bacterial type II/III secretion system short domain OM953_02080 PF01464 Transglycosylase SLT domain OM953_02095 PF00924 Mechanosensitive ion channel OM953_02095 PF12795 Mechanosensitive ion channel porin domain OM953_02095 PF12794 Mechanosensitive ion channel inner membrane domain 1 OM953_02100 PF00884 Sulfatase OM953_02105 PF03109 ABC1 family OM953_02110 PF05661 Protein of unknown function (DUF808) OM953_02115 PF00990 Diguanylate cyclase, GGDEF domain OM953_02120 PF00534 Glycosyl transferases group 1 OM953_02120 PF08323 Starch synthase catalytic domain OM953_02125 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) OM953_02125 PF00128 Alpha amylase, catalytic domain OM953_02125 PF02806 Alpha amylase, C-terminal all-beta domain OM953_02130 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) OM953_02130 PF11941 Domain of unknown function (DUF3459) OM953_02130 PF00128 Alpha amylase, catalytic domain OM953_02135 PF02446 4-alpha-glucanotransferase OM953_02140 PF00128 Alpha amylase, catalytic domain OM953_02150 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) OM953_02150 PF00128 Alpha amylase, catalytic domain OM953_02155 PF13460 NAD(P)H-binding OM953_02170 PF06903 VirK protein OM953_02175 PF02321 Outer membrane efflux protein OM953_02190 PF00873 AcrB/AcrD/AcrF family OM953_02205 PF00271 Helicase conserved C-terminal domain OM953_02205 PF00270 DEAD/DEAH box helicase OM953_02210 PF00364 Biotin-requiring enzyme OM953_02210 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) OM953_02220 PF02779 Transketolase, pyrimidine binding domain OM953_02220 PF02780 Transketolase, C-terminal domain OM953_02225 PF00676 Dehydrogenase E1 component OM953_02235 PF03301 Tryptophan 2,3-dioxygenase OM953_02240 PF00854 POT family OM953_02260 PF01047 MarR family OM953_02265 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily OM953_02270 PF04209 homogentisate 1,2-dioxygenase OM953_02290 PF03334 Na+/H+ antiporter subunit OM953_02295 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) OM953_02305 PF00361 Proton-conducting membrane transporter OM953_02310 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L OM953_02315 PF00361 Proton-conducting membrane transporter OM953_02315 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus OM953_02315 PF13244 Domain of unknown function (DUF4040) OM953_02315 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter OM953_02330 PF07504 Fungalysin/Thermolysin Propeptide Motif OM953_02330 PF02868 Thermolysin metallopeptidase, alpha-helical domain OM953_02330 PF01447 Thermolysin metallopeptidase, catalytic domain OM953_02330 PF01483 Proprotein convertase P-domain OM953_02340 PF01259 SAICAR synthetase OM953_02345 PF05099 Tellurite resistance protein TerB OM953_02345 PF00226 DnaJ domain OM953_02355 PF00834 Ribulose-phosphate 3 epimerase family OM953_02360 PF00583 Acetyltransferase (GNAT) family OM953_02365 PF00781 Diacylglycerol kinase catalytic domain OM953_02370 PF04715 Anthranilate synthase component I, N terminal region OM953_02370 PF00425 chorismate binding enzyme OM953_02385 PF00117 Glutamine amidotransferase class-I OM953_02395 PF02885 Glycosyl transferase family, helical bundle domain OM953_02395 PF00591 Glycosyl transferase family, a/b domain OM953_02400 PF00218 Indole-3-glycerol phosphate synthase OM953_02410 PF00027 Cyclic nucleotide-binding domain OM953_02410 PF00325 Bacterial regulatory proteins, crp family OM953_02415 PF02675 S-adenosylmethionine decarboxylase OM953_02420 PF00893 Small Multidrug Resistance protein OM953_02425 PF03232 Ubiquinone biosynthesis protein COQ7 OM953_02430 PF00572 Ribosomal protein L13 OM953_02435 PF00380 Ribosomal protein S9/S16 OM953_02450 PF00293 NUDIX domain OM953_02460 PF00210 Ferritin-like domain OM953_02465 PF00072 Response regulator receiver domain OM953_02465 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) OM953_02465 PF01627 Hpt domain OM953_02465 PF00512 His Kinase A (phospho-acceptor) domain OM953_02465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_02465 PF00672 HAMP domain OM953_02470 PF00486 Transcriptional regulatory protein, C terminal OM953_02470 PF00072 Response regulator receiver domain OM953_02490 PF01521 Iron-sulphur cluster biosynthesis OM953_02500 PF00293 NUDIX domain OM953_02500 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain OM953_02500 PF09297 NADH pyrophosphatase zinc ribbon domain OM953_02505 PF17113 Regulatory signalling modulator protein AmpE OM953_02505 PF03186 CobD/Cbib protein OM953_02520 PF07690 Major Facilitator Superfamily OM953_02525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM953_02525 PF03466 LysR substrate binding domain OM953_02530 PF07690 Major Facilitator Superfamily OM953_02535 PF12805 FUSC-like inner membrane protein yccS OM953_02540 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain OM953_02540 PF02843 Phosphoribosylglycinamide synthetase, C domain OM953_02540 PF02844 Phosphoribosylglycinamide synthetase, N domain OM953_02550 PF01808 AICARFT/IMPCHase bienzyme OM953_02550 PF02142 MGS-like domain OM953_02555 PF01066 CDP-alcohol phosphatidyltransferase OM953_02560 PF12147 Putative methyltransferase OM953_02560 PF12146 Serine aminopeptidase, S33 OM953_02565 PF00782 Dual specificity phosphatase, catalytic domain OM953_02595 PF02954 Bacterial regulatory protein, Fis family OM953_02610 PF01381 Helix-turn-helix OM953_02635 PF00289 Biotin carboxylase, N-terminal domain OM953_02635 PF02785 Biotin carboxylase C-terminal domain OM953_02635 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain OM953_02645 PF00364 Biotin-requiring enzyme OM953_02650 PF01220 Dehydroquinase class II OM953_02655 PF11412 Disulphide bond corrector protein DsbC OM953_02655 PF02683 Cytochrome C biogenesis protein transmembrane region OM953_02660 PF03091 CutA1 divalent ion tolerance protein OM953_02670 PF04231 Endonuclease I OM953_02675 PF00166 Chaperonin 10 Kd subunit OM953_02680 PF00118 TCP-1/cpn60 chaperonin family OM953_02690 PF07715 TonB-dependent Receptor Plug Domain OM953_02690 PF00593 TonB dependent receptor OM953_02695 PF00793 DAHP synthetase I family OM953_02710 PF08450 SMP-30/Gluconolactonase/LRE-like region OM953_02720 PF08335 GlnD PII-uridylyltransferase OM953_02720 PF03710 Glutamate-ammonia ligase adenylyltransferase OM953_02725 PF02592 Putative vitamin uptake transporter OM953_02750 PF00881 Nitroreductase family OM953_02755 PF04264 YceI-like domain OM953_02760 PF00328 Histidine phosphatase superfamily (branch 2) OM953_02775 PF16957 Malonate decarboxylase, alpha subunit, transporter OM953_02780 PF06857 Malonate decarboxylase delta subunit (MdcD) OM953_02785 PF01039 Carboxyl transferase domain OM953_02795 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG OM953_02800 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase OM953_02810 PF00698 Acyl transferase domain OM953_02820 PF00392 Bacterial regulatory proteins, gntR family OM953_02820 PF07729 FCD domain OM953_02855 PF07745 Glycosyl hydrolase family 53 OM953_02860 PF17831 Pyruvate dehydrogenase E1 component middle domain OM953_02860 PF00456 Transketolase, thiamine diphosphate binding domain OM953_02980 PF10566 Glycoside hydrolase 97 OM953_02980 PF14508 Glycosyl-hydrolase 97 N-terminal OM953_02980 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation OM953_03005 PF00106 short chain dehydrogenase OM953_03020 PF00106 short chain dehydrogenase OM953_03030 PF13409 Glutathione S-transferase, N-terminal domain OM953_03065 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region OM953_03065 PF00326 Prolyl oligopeptidase family OM953_03070 PF07759 Protein of unknown function (DUF1615) OM953_03100 PF00892 EamA-like transporter family OM953_03105 PF00497 Bacterial extracellular solute-binding proteins, family 3 OM953_03115 PF00324 Amino acid permease OM953_03125 PF01544 CorA-like Mg2+ transporter protein OM953_03135 PF01204 Trehalase OM953_03145 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain OM953_03145 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain OM953_03170 PF00563 EAL domain OM953_03170 PF00990 Diguanylate cyclase, GGDEF domain OM953_03170 PF03707 Bacterial signalling protein N terminal repeat OM953_03180 PF00672 HAMP domain OM953_03180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM953_03180 PF02203 Tar ligand binding domain homologue OM953_03185 PF00150 Cellulase (glycosyl hydrolase family 5) OM953_03185 PF00553 Cellulose binding domain OM953_03190 PF01740 STAS domain OM953_03190 PF00916 Sulfate permease family OM953_03195 PF00990 Diguanylate cyclase, GGDEF domain OM953_03205 PF13632 Glycosyl transferase family group 2 OM953_03215 PF06580 Histidine kinase OM953_03215 PF07694 5TMR of 5TMR-LYT OM953_03220 PF04397 LytTr DNA-binding domain OM953_03220 PF00072 Response regulator receiver domain OM953_03225 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain OM953_03225 PF03900 Porphobilinogen deaminase, C-terminal domain OM953_03250 PF00326 Prolyl oligopeptidase family OM953_03250 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain OM953_03255 PF00155 Aminotransferase class I and II OM953_03260 PF00326 Prolyl oligopeptidase family OM953_03260 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain OM953_03265 PF04304 Protein of unknown function (DUF454) OM953_03275 PF01678 Diaminopimelate epimerase OM953_03285 PF02899 Phage integrase, N-terminal SAM-like domain OM953_03285 PF00589 Phage integrase family OM953_03290 PF00227 Proteasome subunit OM953_03295 PF00004 ATPase family associated with various cellular activities (AAA) OM953_03295 PF07724 AAA domain (Cdc48 subfamily) OM953_03295 PF10431 C-terminal, D2-small domain, of ClpB protein OM953_03305 PF13673 Acetyltransferase (GNAT) domain OM953_03310 PF13533 Biotin-lipoyl like OM953_03320 PF01209 ubiE/COQ5 methyltransferase family OM953_03325 PF03707 Bacterial signalling protein N terminal repeat OM953_03325 PF00563 EAL domain OM953_03325 PF00990 Diguanylate cyclase, GGDEF domain OM953_03330 PF11838 ERAP1-like C-terminal domain OM953_03330 PF01433 Peptidase family M1 domain OM953_03345 PF13360 PQQ-like domain OM953_03350 PF00497 Bacterial extracellular solute-binding proteins, family 3 OM953_03365 PF00107 Zinc-binding dehydrogenase OM953_03365 PF08240 Alcohol dehydrogenase GroES-like domain OM953_03375 PF02954 Bacterial regulatory protein, Fis family OM953_03375 PF00158 Sigma-54 interaction domain OM953_03375 PF01590 GAF domain OM953_03380 PF00294 pfkB family carbohydrate kinase OM953_03390 PF04085 rod shape-determining protein MreC OM953_03400 PF03717 Penicillin-binding Protein dimerisation domain OM953_03400 PF00905 Penicillin binding protein transpeptidase domain OM953_03405 PF01098 Cell cycle protein OM953_03410 PF00295 Glycosyl hydrolases family 28 OM953_03415 PF13406 Transglycosylase SLT domain OM953_03420 PF05036 Sporulation related domain OM953_03420 PF03330 Lytic transglycolase OM953_03425 PF07943 Penicillin-binding protein 5, C-terminal domain OM953_03425 PF00768 D-alanyl-D-alanine carboxypeptidase OM953_03435 PF04359 Protein of unknown function (DUF493) OM953_03440 PF03099 Biotin/lipoate A/B protein ligase family OM953_03445 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family OM953_03445 PF04055 Radical SAM superfamily OM953_03450 PF11818 C-terminal domain of tail specific protease (DUF3340) OM953_03450 PF00595 PDZ domain OM953_03450 PF03572 Peptidase family S41 OM953_03450 PF17804 Tail specific protease N-terminal domain OM953_03460 PF03466 LysR substrate binding domain OM953_03460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM953_03470 PF01467 Cytidylyltransferase-like OM953_03470 PF00293 NUDIX domain OM953_03505 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain OM953_03505 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase OM953_03510 PF01408 Oxidoreductase family, NAD-binding Rossmann fold OM953_03510 PF02894 Oxidoreductase family, C-terminal alpha/beta domain OM953_03515 PF04972 BON domain OM953_03520 PF01590 GAF domain OM953_03520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_03520 PF00512 His Kinase A (phospho-acceptor) domain OM953_03520 PF08446 PAS fold OM953_03520 PF00360 Phytochrome region OM953_03525 PF00072 Response regulator receiver domain OM953_03530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_03530 PF00512 His Kinase A (phospho-acceptor) domain OM953_03535 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) OM953_03540 PF00106 short chain dehydrogenase OM953_03580 PF00263 Bacterial type II and III secretion system protein OM953_03580 PF03958 Bacterial type II/III secretion system short domain OM953_03585 PF00437 Type II/IV secretion system protein OM953_03590 PF00482 Type II secretion system (T2SS), protein F OM953_03595 PF07963 Prokaryotic N-terminal methylation motif OM953_03595 PF08334 Type II secretion system (T2SS), protein G OM953_03600 PF12019 Type II transport protein GspH OM953_03600 PF07963 Prokaryotic N-terminal methylation motif OM953_03605 PF02501 Type II secretion system (T2SS), protein I OM953_03605 PF07963 Prokaryotic N-terminal methylation motif OM953_03610 PF11612 Type II secretion system (T2SS), protein J OM953_03610 PF07963 Prokaryotic N-terminal methylation motif OM953_03615 PF03934 Type II secretion system (T2SS), protein K OM953_03640 PF00703 Glycosyl hydrolases family 2 OM953_03640 PF02836 Glycosyl hydrolases family 2, TIM barrel domain OM953_03640 PF02837 Glycosyl hydrolases family 2, sugar binding domain OM953_03640 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 OM953_03640 PF16355 Domain of unknown function (DUF4982) OM953_03655 PF07702 UTRA domain OM953_03655 PF00392 Bacterial regulatory proteins, gntR family OM953_03660 PF07690 Major Facilitator Superfamily OM953_03665 PF00356 Bacterial regulatory proteins, lacI family OM953_03670 PF01380 SIS domain OM953_03675 PF01979 Amidohydrolase family OM953_03690 PF12627 Probable RNA and SrmB- binding site of polymerase A OM953_03690 PF01966 HD domain OM953_03690 PF01743 Poly A polymerase head domain OM953_03695 PF05199 GMC oxidoreductase OM953_03695 PF00732 GMC oxidoreductase OM953_03700 PF00171 Aldehyde dehydrogenase family OM953_03705 PF02028 BCCT, betaine/carnitine/choline family transporter OM953_03720 PF01323 DSBA-like thioredoxin domain OM953_03730 PF00034 Cytochrome c OM953_03735 PF01926 50S ribosome-binding GTPase OM953_03740 PF10996 Beta-Casp domain OM953_03740 PF00753 Metallo-beta-lactamase superfamily OM953_03740 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain OM953_03750 PF04107 Glutamate-cysteine ligase family 2(GCS2) OM953_03755 PF00672 HAMP domain OM953_03755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_03755 PF00512 His Kinase A (phospho-acceptor) domain OM953_03760 PF00072 Response regulator receiver domain OM953_03760 PF00486 Transcriptional regulatory protein, C terminal OM953_03775 PF02583 Metal-sensitive transcriptional repressor OM953_03780 PF08240 Alcohol dehydrogenase GroES-like domain OM953_03780 PF00107 Zinc-binding dehydrogenase OM953_03785 PF04828 Glutathione-dependent formaldehyde-activating enzyme OM953_03790 PF00756 Putative esterase OM953_03800 PF00392 Bacterial regulatory proteins, gntR family OM953_03800 PF00155 Aminotransferase class I and II OM953_03805 PF02567 Phenazine biosynthesis-like protein OM953_03810 PF00892 EamA-like transporter family OM953_03820 PF12848 ABC transporter OM953_03820 PF00005 ABC transporter OM953_03830 PF00464 Serine hydroxymethyltransferase OM953_03835 PF03477 ATP cone domain OM953_03845 PF01872 RibD C-terminal domain OM953_03845 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region OM953_03855 PF00677 Lumazine binding domain OM953_03860 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase OM953_03860 PF00925 GTP cyclohydrolase II OM953_03865 PF00885 6,7-dimethyl-8-ribityllumazine synthase OM953_03870 PF01029 NusB family OM953_03875 PF02769 AIR synthase related protein, C-terminal domain OM953_03875 PF00586 AIR synthase related protein, N-terminal domain OM953_03895 PF03814 Potassium-transporting ATPase A subunit OM953_03905 PF02669 K+-transporting ATPase, c chain OM953_03910 PF13492 GAF domain OM953_03910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_03910 PF13493 Domain of unknown function (DUF4118) OM953_03910 PF00512 His Kinase A (phospho-acceptor) domain OM953_03910 PF02702 Osmosensitive K+ channel His kinase sensor domain OM953_03915 PF00072 Response regulator receiver domain OM953_03915 PF00486 Transcriptional regulatory protein, C terminal OM953_03930 PF02913 FAD linked oxidases, C-terminal domain OM953_03930 PF01565 FAD binding domain OM953_03935 PF04307 LexA-binding, inner membrane-associated putative hydrolase OM953_03940 PF02021 Uncharacterised protein family UPF0102 OM953_03950 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases OM953_03965 PF02381 MraZ protein, putative antitoxin-like OM953_03970 PF01795 MraW methylase family OM953_03975 PF04999 Cell division protein FtsL OM953_03980 PF00905 Penicillin binding protein transpeptidase domain OM953_03980 PF03717 Penicillin-binding Protein dimerisation domain OM953_03985 PF01225 Mur ligase family, catalytic domain OM953_03985 PF02875 Mur ligase family, glutamate ligase domain OM953_03985 PF08245 Mur ligase middle domain OM953_03990 PF01225 Mur ligase family, catalytic domain OM953_03990 PF02875 Mur ligase family, glutamate ligase domain OM953_03990 PF08245 Mur ligase middle domain OM953_03995 PF00953 Glycosyl transferase family 4 OM953_04000 PF01098 Cell cycle protein OM953_04005 PF04101 Glycosyltransferase family 28 C-terminal domain OM953_04005 PF03033 Glycosyltransferase family 28 N-terminal domain OM953_04010 PF01225 Mur ligase family, catalytic domain OM953_04010 PF02875 Mur ligase family, glutamate ligase domain OM953_04010 PF08245 Mur ligase middle domain OM953_04015 PF07478 D-ala D-ala ligase C-terminus OM953_04015 PF01820 D-ala D-ala ligase N-terminus OM953_04020 PF08478 POTRA domain, FtsQ-type OM953_04020 PF03799 Cell division protein FtsQ OM953_04025 PF02491 SHS2 domain inserted in FTSA OM953_04030 PF12327 FtsZ family, C-terminal domain OM953_04030 PF00091 Tubulin/FtsZ family, GTPase domain OM953_04035 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase OM953_04045 PF01551 Peptidase family M23 OM953_04045 PF08525 Opacity-associated protein A N-terminal motif OM953_04045 PF01476 LysM domain OM953_04050 PF01043 SecA preprotein cross-linking domain OM953_04050 PF07517 SecA DEAD-like domain OM953_04050 PF07516 SecA Wing and Scaffold domain OM953_04050 PF02810 SEC-C motif OM953_04055 PF00293 NUDIX domain OM953_04065 PF02219 Methylenetetrahydrofolate reductase OM953_04075 PF00550 Phosphopantetheine attachment site OM953_04075 PF00107 Zinc-binding dehydrogenase OM953_04075 PF00698 Acyl transferase domain OM953_04075 PF08240 Alcohol dehydrogenase GroES-like domain OM953_04075 PF08659 KR domain OM953_04075 PF16197 Ketoacyl-synthetase C-terminal extension OM953_04075 PF00109 Beta-ketoacyl synthase, N-terminal domain OM953_04075 PF02801 Beta-ketoacyl synthase, C-terminal domain OM953_04075 PF14765 Polyketide synthase dehydratase OM953_04080 PF09286 Pro-kumamolisin, activation domain OM953_04080 PF00082 Subtilase family OM953_04090 PF01408 Oxidoreductase family, NAD-binding Rossmann fold OM953_04095 PF00128 Alpha amylase, catalytic domain OM953_04115 PF00685 Sulfotransferase domain OM953_04125 PF13649 Methyltransferase domain OM953_04130 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain OM953_04130 PF05221 S-adenosyl-L-homocysteine hydrolase OM953_04140 PF00311 Phosphoenolpyruvate carboxylase OM953_04160 PF00691 OmpA family OM953_04160 PF01389 OmpA-like transmembrane domain OM953_04175 PF00328 Histidine phosphatase superfamily (branch 2) OM953_04180 PF02773 S-adenosylmethionine synthetase, C-terminal domain OM953_04180 PF02772 S-adenosylmethionine synthetase, central domain OM953_04180 PF00438 S-adenosylmethionine synthetase, N-terminal domain OM953_04190 PF13649 Methyltransferase domain OM953_04195 PF01207 Dihydrouridine synthase (Dus) OM953_04205 PF00294 pfkB family carbohydrate kinase OM953_04210 PF01773 Na+ dependent nucleoside transporter N-terminus OM953_04210 PF07670 Nucleoside recognition OM953_04210 PF07662 Na+ dependent nucleoside transporter C-terminus OM953_04215 PF00248 Aldo/keto reductase family OM953_04225 PF00593 TonB dependent receptor OM953_04225 PF07715 TonB-dependent Receptor Plug Domain OM953_04245 PF00528 Binding-protein-dependent transport system inner membrane component OM953_04250 PF00005 ABC transporter OM953_04260 PF02668 Taurine catabolism dioxygenase TauD, TfdA family OM953_04270 PF00005 ABC transporter OM953_04275 PF13472 GDSL-like Lipase/Acylhydrolase family OM953_04280 PF00486 Transcriptional regulatory protein, C terminal OM953_04280 PF00072 Response regulator receiver domain OM953_04285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_04285 PF08521 Two-component sensor kinase N-terminal OM953_04285 PF00512 His Kinase A (phospho-acceptor) domain OM953_04295 PF01219 Prokaryotic diacylglycerol kinase OM953_04315 PF01790 Prolipoprotein diacylglyceryl transferase OM953_04320 PF00303 Thymidylate synthase OM953_04330 PF00186 Dihydrofolate reductase OM953_04335 PF00158 Sigma-54 interaction domain OM953_04340 PF08028 Acyl-CoA dehydrogenase, C-terminal domain OM953_04340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OM953_04345 PF00005 ABC transporter OM953_04350 PF00528 Binding-protein-dependent transport system inner membrane component OM953_04360 PF00296 Luciferase-like monooxygenase OM953_04365 PF03358 NADPH-dependent FMN reductase OM953_04385 PF00296 Luciferase-like monooxygenase OM953_04390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle OM953_04395 PF00528 Binding-protein-dependent transport system inner membrane component OM953_04400 PF00528 Binding-protein-dependent transport system inner membrane component OM953_04400 PF12911 N-terminal TM domain of oligopeptide transport permease C OM953_04405 PF00005 ABC transporter OM953_04405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region OM953_04410 PF00149 Calcineurin-like phosphoesterase OM953_04415 PF04379 ApaG domain OM953_04420 PF00398 Ribosomal RNA adenine dimethylase OM953_04425 PF04166 Pyridoxal phosphate biosynthetic protein PdxA OM953_04430 PF00639 PPIC-type PPIASE domain OM953_04430 PF09312 SurA N-terminal domain OM953_04435 PF03968 OstA-like protein OM953_04435 PF04453 LPS transport system D OM953_04450 PF00850 Histone deacetylase domain OM953_04455 PF01923 Cobalamin adenosyltransferase OM953_04470 PF01494 FAD binding domain OM953_04475 PF01494 FAD binding domain OM953_04495 PF07729 FCD domain OM953_04495 PF00392 Bacterial regulatory proteins, gntR family OM953_04500 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase OM953_04505 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit OM953_04505 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase OM953_04510 PF03466 LysR substrate binding domain OM953_04510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM953_04515 PF13193 AMP-binding enzyme C-terminal domain OM953_04515 PF00501 AMP-binding enzyme OM953_04520 PF00171 Aldehyde dehydrogenase family OM953_04525 PF00378 Enoyl-CoA hydratase/isomerase OM953_04550 PF01408 Oxidoreductase family, NAD-binding Rossmann fold OM953_04550 PF02894 Oxidoreductase family, C-terminal alpha/beta domain OM953_04555 PF01728 FtsJ-like methyltransferase OM953_04555 PF18125 RlmM ferredoxin-like domain OM953_04580 PF00892 EamA-like transporter family OM953_04590 PF00749 tRNA synthetases class I (E and Q), catalytic domain OM953_04590 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain OM953_04605 PF00990 Diguanylate cyclase, GGDEF domain OM953_04605 PF00072 Response regulator receiver domain OM953_04610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_04610 PF00072 Response regulator receiver domain OM953_04610 PF00672 HAMP domain OM953_04610 PF01627 Hpt domain OM953_04610 PF00512 His Kinase A (phospho-acceptor) domain OM953_04610 PF17149 Periplasmic sensor domain found in signal transduction proteins OM953_04615 PF00072 Response regulator receiver domain OM953_04615 PF00196 Bacterial regulatory proteins, luxR family OM953_04625 PF01625 Peptide methionine sulfoxide reductase OM953_04635 PF00923 Transaldolase/Fructose-6-phosphate aldolase OM953_04640 PF01272 Transcription elongation factor, GreA/GreB, C-term OM953_04640 PF14760 Rnk N-terminus OM953_04645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM953_04645 PF03466 LysR substrate binding domain OM953_04650 PF07992 Pyridine nucleotide-disulphide oxidoreductase OM953_04650 PF13192 Thioredoxin domain OM953_04655 PF10417 C-terminal domain of 1-Cys peroxiredoxin OM953_04655 PF00578 AhpC/TSA family OM953_04660 PF05175 Methyltransferase small domain OM953_04660 PF17827 PrmC N-terminal domain OM953_04665 PF00561 alpha/beta hydrolase fold OM953_04680 PF00293 NUDIX domain OM953_04685 PF01612 3'-5' exonuclease OM953_04685 PF01367 5'-3' exonuclease, C-terminal SAM fold OM953_04685 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain OM953_04685 PF00476 DNA polymerase family A OM953_04715 PF01262 Alanine dehydrogenase/PNT, C-terminal domain OM953_04715 PF05222 Alanine dehydrogenase/PNT, N-terminal domain OM953_04715 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch OM953_04735 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch OM953_04740 PF02233 NAD(P) transhydrogenase beta subunit OM953_04755 PF01063 Amino-transferase class IV OM953_04765 PF00082 Subtilase family OM953_04765 PF04151 Bacterial pre-peptidase C-terminal domain OM953_04770 PF04151 Bacterial pre-peptidase C-terminal domain OM953_04770 PF00082 Subtilase family OM953_04775 PF04073 Aminoacyl-tRNA editing domain OM953_04785 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain OM953_04785 PF17189 Glycosyl hydrolase family 30 beta sandwich domain OM953_04795 PF03358 NADPH-dependent FMN reductase OM953_04800 PF03631 Virulence factor BrkB OM953_04805 PF08534 Redoxin OM953_04810 PF00708 Acylphosphatase OM953_04820 PF03976 Polyphosphate kinase 2 (PPK2) OM953_04825 PF00994 Probable molybdopterin binding domain OM953_04835 PF03462 PCRF domain OM953_04835 PF00472 RF-1 domain OM953_04840 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain OM953_04840 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain OM953_04840 PF01488 Shikimate / quinate 5-dehydrogenase OM953_04850 PF03550 Outer membrane lipoprotein LolB OM953_04855 PF08544 GHMP kinases C terminal OM953_04855 PF00288 GHMP kinases N terminal domain OM953_04865 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase OM953_04865 PF14572 Phosphoribosyl synthetase-associated domain OM953_04875 PF01195 Peptidyl-tRNA hydrolase OM953_04880 PF06071 Protein of unknown function (DUF933) OM953_04880 PF01926 50S ribosome-binding GTPase OM953_04900 PF03143 Elongation factor Tu C-terminal domain OM953_04900 PF03144 Elongation factor Tu domain 2 OM953_04900 PF00009 Elongation factor Tu GTP binding domain OM953_04910 PF00584 SecE/Sec61-gamma subunits of protein translocation complex OM953_04915 PF00467 KOW motif OM953_04915 PF02357 Transcription termination factor nusG OM953_04920 PF00298 Ribosomal protein L11, RNA binding domain OM953_04920 PF03946 Ribosomal protein L11, N-terminal domain OM953_04925 PF00687 Ribosomal protein L1p/L10e family OM953_04930 PF00466 Ribosomal protein L10 OM953_04935 PF00542 Ribosomal protein L7/L12 C-terminal domain OM953_04935 PF16320 Ribosomal protein L7/L12 dimerisation domain OM953_04940 PF00562 RNA polymerase Rpb2, domain 6 OM953_04940 PF04560 RNA polymerase Rpb2, domain 7 OM953_04940 PF10385 RNA polymerase beta subunit external 1 domain OM953_04940 PF04563 RNA polymerase beta subunit OM953_04940 PF04561 RNA polymerase Rpb2, domain 2 OM953_04940 PF04565 RNA polymerase Rpb2, domain 3 OM953_04945 PF04997 RNA polymerase Rpb1, domain 1 OM953_04945 PF00623 RNA polymerase Rpb1, domain 2 OM953_04945 PF04983 RNA polymerase Rpb1, domain 3 OM953_04945 PF05000 RNA polymerase Rpb1, domain 4 OM953_04945 PF04998 RNA polymerase Rpb1, domain 5 OM953_04950 PF00164 Ribosomal protein S12/S23 OM953_04955 PF00177 Ribosomal protein S7p/S5e OM953_04960 PF14492 Elongation Factor G, domain II OM953_04960 PF00679 Elongation factor G C-terminus OM953_04960 PF00009 Elongation factor Tu GTP binding domain OM953_04960 PF03764 Elongation factor G, domain IV OM953_04960 PF03144 Elongation factor Tu domain 2 OM953_04965 PF03144 Elongation factor Tu domain 2 OM953_04965 PF03143 Elongation factor Tu C-terminal domain OM953_04965 PF00009 Elongation factor Tu GTP binding domain OM953_04970 PF00338 Ribosomal protein S10p/S20e OM953_04975 PF00297 Ribosomal protein L3 OM953_04980 PF00573 Ribosomal protein L4/L1 family OM953_04985 PF00276 Ribosomal protein L23 OM953_04990 PF00181 Ribosomal Proteins L2, RNA binding domain OM953_04990 PF03947 Ribosomal Proteins L2, C-terminal domain OM953_04995 PF00203 Ribosomal protein S19 OM953_05000 PF00237 Ribosomal protein L22p/L17e OM953_05005 PF07650 KH domain OM953_05005 PF00189 Ribosomal protein S3, C-terminal domain OM953_05010 PF00252 Ribosomal protein L16p/L10e OM953_05015 PF00831 Ribosomal L29 protein OM953_05020 PF00366 Ribosomal protein S17 OM953_05025 PF00238 Ribosomal protein L14p/L23e OM953_05030 PF00467 KOW motif OM953_05030 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 OM953_05035 PF00673 ribosomal L5P family C-terminus OM953_05035 PF00281 Ribosomal protein L5 OM953_05040 PF00253 Ribosomal protein S14p/S29e OM953_05045 PF00410 Ribosomal protein S8 OM953_05050 PF00347 Ribosomal protein L6 OM953_05055 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast OM953_05060 PF03719 Ribosomal protein S5, C-terminal domain OM953_05060 PF00333 Ribosomal protein S5, N-terminal domain OM953_05065 PF00327 Ribosomal protein L30p/L7e OM953_05070 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A OM953_05075 PF00344 SecY translocase OM953_05080 PF00416 Ribosomal protein S13/S18 OM953_05085 PF00411 Ribosomal protein S11 OM953_05090 PF00163 Ribosomal protein S4/S9 N-terminal domain OM953_05090 PF01479 S4 domain OM953_05095 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain OM953_05095 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain OM953_05095 PF01000 RNA polymerase Rpb3/RpoA insert domain OM953_05100 PF01196 Ribosomal protein L17 OM953_05105 PF02600 Disulfide bond formation protein DsbB OM953_05120 PF01474 Class-II DAHP synthetase family OM953_05135 PF01425 Amidase OM953_05145 PF00679 Elongation factor G C-terminus OM953_05145 PF00009 Elongation factor Tu GTP binding domain OM953_05145 PF03144 Elongation factor Tu domain 2 OM953_05150 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD OM953_05155 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain OM953_05155 PF00056 lactate/malate dehydrogenase, NAD binding domain OM953_05160 PF02798 Glutathione S-transferase, N-terminal domain OM953_05160 PF00043 Glutathione S-transferase, C-terminal domain OM953_05170 PF00724 NADH:flavin oxidoreductase / NADH oxidase family OM953_05170 PF07992 Pyridine nucleotide-disulphide oxidoreductase OM953_05175 PF00107 Zinc-binding dehydrogenase OM953_05175 PF08240 Alcohol dehydrogenase GroES-like domain OM953_05180 PF00691 OmpA family OM953_05180 PF05736 OprF membrane domain OM953_05190 PF00849 RNA pseudouridylate synthase OM953_05200 PF00155 Aminotransferase class I and II OM953_05210 PF00528 Binding-protein-dependent transport system inner membrane component OM953_05215 PF00528 Binding-protein-dependent transport system inner membrane component OM953_05220 PF17850 CysA C-terminal regulatory domain OM953_05220 PF12857 TOBE-like domain OM953_05220 PF00005 ABC transporter OM953_05230 PF08240 Alcohol dehydrogenase GroES-like domain OM953_05230 PF00107 Zinc-binding dehydrogenase OM953_05240 PF05506 Domain of unknown function (DUF756) OM953_05240 PF04185 Phosphoesterase family OM953_05245 PF10459 Peptidase S46 OM953_05250 PF00300 Histidine phosphatase superfamily (branch 1) OM953_05255 PF02875 Mur ligase family, glutamate ligase domain OM953_05255 PF08245 Mur ligase middle domain OM953_05270 PF00156 Phosphoribosyl transferase domain OM953_05275 PF04305 Protein of unknown function (DUF455) OM953_05290 PF00149 Calcineurin-like phosphoesterase OM953_05295 PF01569 PAP2 superfamily OM953_05300 PF13439 Glycosyltransferase Family 4 OM953_05300 PF00534 Glycosyl transferases group 1 OM953_05305 PF02541 Ppx/GppA phosphatase family OM953_05310 PF02503 Polyphosphate kinase middle domain OM953_05310 PF13089 Polyphosphate kinase N-terminal domain OM953_05310 PF17941 Polyphosphate kinase C-terminal domain 1 OM953_05310 PF13090 Polyphosphate kinase C-terminal domain 2 OM953_05315 PF00512 His Kinase A (phospho-acceptor) domain OM953_05315 PF00989 PAS fold OM953_05315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_05315 PF11808 Phosphate regulon sensor protein PhoR OM953_05320 PF00486 Transcriptional regulatory protein, C terminal OM953_05320 PF00072 Response regulator receiver domain OM953_05325 PF01435 Peptidase family M48 OM953_05325 PF13181 Tetratricopeptide repeat OM953_05330 PF00462 Glutaredoxin OM953_05340 PF00180 Isocitrate/isopropylmalate dehydrogenase OM953_05555 PF00182 Chitinase class I OM953_05610 PF01555 DNA methylase OM953_05625 PF00872 Transposase, Mutator family OM953_05635 PF00717 Peptidase S24-like OM953_05645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_05645 PF00512 His Kinase A (phospho-acceptor) domain OM953_05645 PF00989 PAS fold OM953_05655 PF05697 Bacterial trigger factor protein (TF) OM953_05655 PF05698 Bacterial trigger factor protein (TF) C-terminus OM953_05660 PF00574 Clp protease OM953_05665 PF10431 C-terminal, D2-small domain, of ClpB protein OM953_05665 PF06689 ClpX C4-type zinc finger OM953_05665 PF07724 AAA domain (Cdc48 subfamily) OM953_05670 PF00004 ATPase family associated with various cellular activities (AAA) OM953_05670 PF05362 Lon protease (S16) C-terminal proteolytic domain OM953_05670 PF02190 ATP-dependent protease La (LON) substrate-binding domain OM953_05675 PF00216 Bacterial DNA-binding protein OM953_05705 PF16123 Hydroxyacylglutathione hydrolase C-terminus OM953_05705 PF00753 Metallo-beta-lactamase superfamily OM953_05715 PF00075 RNase H OM953_05720 PF00929 Exonuclease OM953_05740 PF01075 Glycosyltransferase family 9 (heptosyltransferase) OM953_05750 PF00753 Metallo-beta-lactamase superfamily OM953_05750 PF12706 Beta-lactamase superfamily domain OM953_05755 PF04055 Radical SAM superfamily OM953_05755 PF06463 Molybdenum Cofactor Synthesis C OM953_05765 PF01967 MoaC family OM953_05770 PF02597 ThiS family OM953_05775 PF02391 MoaE protein OM953_05790 PF12169 DNA polymerase III subunits gamma and tau domain III OM953_05790 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding OM953_05790 PF12170 DNA polymerase III tau subunit V interacting with alpha OM953_05795 PF02575 YbaB/EbfC DNA-binding family OM953_05800 PF02132 RecR protein OM953_05800 PF13662 Toprim domain OM953_05805 PF01230 HIT domain OM953_05815 PF01841 Transglutaminase-like superfamily OM953_05815 PF13559 Domain of unknown function (DUF4129) OM953_05815 PF11992 Domain of unknown function (DUF3488) OM953_05825 PF07726 ATPase family associated with various cellular activities (AAA) OM953_05825 PF17863 AAA lid domain OM953_05850 PF02545 Maf-like protein OM953_05855 PF02620 Large ribosomal RNA subunit accumulation protein YceD OM953_05860 PF01783 Ribosomal L32p protein family OM953_05865 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III OM953_05865 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal OM953_05875 PF00698 Acyl transferase domain OM953_05885 PF00550 Phosphopantetheine attachment site OM953_05890 PF00109 Beta-ketoacyl synthase, N-terminal domain OM953_05890 PF02801 Beta-ketoacyl synthase, C-terminal domain OM953_05895 PF04715 Anthranilate synthase component I, N terminal region OM953_05895 PF00425 chorismate binding enzyme OM953_05900 PF02618 YceG-like family OM953_05905 PF09115 DNA polymerase III, delta subunit, C terminal OM953_05925 PF02954 Bacterial regulatory protein, Fis family OM953_05925 PF06506 Propionate catabolism activator OM953_05925 PF00158 Sigma-54 interaction domain OM953_05935 PF00285 Citrate synthase, C-terminal domain OM953_05940 PF00694 Aconitase C-terminal domain OM953_05940 PF00330 Aconitase family (aconitate hydratase) OM953_05950 PF04303 PrpF protein OM953_05955 PF00593 TonB dependent receptor OM953_05955 PF07715 TonB-dependent Receptor Plug Domain OM953_05965 PF07703 Alpha-2-macroglobulin bait region domain OM953_05965 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain OM953_05965 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain OM953_05965 PF11974 Bacterial alpha-2-macroglobulin MG3 domain OM953_05965 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain OM953_05965 PF17962 Bacterial macroglobulin domain 6 OM953_05965 PF01835 MG2 domain OM953_05965 PF00207 Alpha-2-macroglobulin family OM953_05980 PF06832 Penicillin-Binding Protein C-terminus Family OM953_05980 PF00912 Transglycosylase OM953_05980 PF00905 Penicillin binding protein transpeptidase domain OM953_05990 PF08534 Redoxin OM953_06000 PF00226 DnaJ domain OM953_06000 PF01556 DnaJ C terminal domain OM953_06005 PF00072 Response regulator receiver domain OM953_06010 PF12221 Bacterial membrane protein N terminal OM953_06010 PF01145 SPFH domain / Band 7 family OM953_06015 PF01145 SPFH domain / Band 7 family OM953_06030 PF00709 Adenylosuccinate synthetase OM953_06035 PF11838 ERAP1-like C-terminal domain OM953_06035 PF01433 Peptidase family M1 domain OM953_06050 PF00440 Bacterial regulatory proteins, tetR family OM953_06095 PF01555 DNA methylase OM953_06100 PF00580 UvrD/REP helicase N-terminal domain OM953_06100 PF13361 UvrD-like helicase C-terminal domain OM953_06125 PF13456 Reverse transcriptase-like OM953_06125 PF00300 Histidine phosphatase superfamily (branch 1) OM953_06130 PF01256 Carbohydrate kinase OM953_06140 PF00723 Glycosyl hydrolases family 15 OM953_06150 PF07971 Glycosyl hydrolase family 92 OM953_06150 PF17678 Glycosyl hydrolase family 92 N-terminal domain OM953_06155 PF00106 short chain dehydrogenase OM953_06170 PF07992 Pyridine nucleotide-disulphide oxidoreductase OM953_06195 PF17755 UvrA DNA-binding domain OM953_06200 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain OM953_06200 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase OM953_06205 PF03450 CO dehydrogenase flavoprotein C-terminal domain OM953_06205 PF00941 FAD binding domain in molybdopterin dehydrogenase OM953_06210 PF00111 2Fe-2S iron-sulfur cluster binding domain OM953_06210 PF01799 [2Fe-2S] binding domain OM953_06245 PF01726 LexA DNA binding domain OM953_06245 PF00717 Peptidase S24-like OM953_06260 PF14579 Helix-hairpin-helix motif OM953_06260 PF17657 Bacterial DNA polymerase III alpha subunit finger domain OM953_06260 PF07733 Bacterial DNA polymerase III alpha NTPase domain OM953_06260 PF02811 PHP domain OM953_06280 PF03169 OPT oligopeptide transporter protein OM953_06295 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region OM953_06295 PF07676 WD40-like Beta Propeller Repeat OM953_06295 PF00326 Prolyl oligopeptidase family OM953_06310 PF02311 AraC-like ligand binding domain OM953_06310 PF12833 Helix-turn-helix domain OM953_06330 PF00199 Catalase OM953_06330 PF06628 Catalase-related immune-responsive OM953_06330 PF18011 C-terminal domain found in long catalases OM953_06335 PF00248 Aldo/keto reductase family OM953_06340 PF00135 Carboxylesterase family OM953_06345 PF02347 Glycine cleavage system P-protein OM953_06350 PF07690 Major Facilitator Superfamily OM953_06365 PF00884 Sulfatase OM953_06365 PF08019 Phosphoethanolamine transferase EptA/EptB OM953_06380 PF00072 Response regulator receiver domain OM953_06380 PF00486 Transcriptional regulatory protein, C terminal OM953_06385 PF08521 Two-component sensor kinase N-terminal OM953_06385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_06385 PF00512 His Kinase A (phospho-acceptor) domain OM953_06395 PF03776 Septum formation topological specificity factor MinE OM953_06400 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain OM953_06405 PF05209 Septum formation inhibitor MinC, N-terminal domain OM953_06405 PF03775 Septum formation inhibitor MinC, C-terminal domain OM953_06415 PF07730 Histidine kinase OM953_06420 PF00072 Response regulator receiver domain OM953_06420 PF00196 Bacterial regulatory proteins, luxR family OM953_06435 PF00730 HhH-GPD superfamily base excision DNA repair protein OM953_06460 PF02222 ATP-grasp domain OM953_06470 PF04377 Arginine-tRNA-protein transferase, C terminus OM953_06470 PF04376 Arginine-tRNA-protein transferase, N terminus OM953_06495 PF00378 Enoyl-CoA hydratase/isomerase OM953_06510 PF00005 ABC transporter OM953_06510 PF17760 UvrA interaction domain OM953_06510 PF17755 UvrA DNA-binding domain OM953_06515 PF00829 Ribosomal prokaryotic L21 protein OM953_06520 PF01016 Ribosomal L27 protein OM953_06525 PF01018 GTP1/OBG OM953_06525 PF01926 50S ribosome-binding GTPase OM953_06530 PF01649 Ribosomal protein S20 OM953_06535 PF03023 Lipid II flippase MurJ OM953_06540 PF01687 Riboflavin kinase OM953_06540 PF06574 FAD synthetase OM953_06545 PF06827 Zinc finger found in FPG and IleRS OM953_06545 PF00133 tRNA synthetases class I (I, L, M and V) OM953_06545 PF08264 Anticodon-binding domain of tRNA OM953_06550 PF01252 Signal peptidase (SPase) II OM953_06555 PF02401 LytB protein OM953_06565 PF00116 Cytochrome C oxidase subunit II, periplasmic domain OM953_06565 PF06481 COX Aromatic Rich Motif OM953_06570 PF00115 Cytochrome C and Quinol oxidase polypeptide I OM953_06575 PF00510 Cytochrome c oxidase subunit III OM953_06580 PF03626 Prokaryotic Cytochrome C oxidase subunit IV OM953_06590 PF18073 Rubredoxin metal binding domain OM953_06595 PF05656 Protein of unknown function (DUF805) OM953_06605 PF12833 Helix-turn-helix domain OM953_06610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_06610 PF00183 Hsp90 protein OM953_06620 PF01740 STAS domain OM953_06620 PF08678 Rsbr N terminal OM953_06625 PF01740 STAS domain OM953_06630 PF13581 Histidine kinase-like ATPase domain OM953_06640 PF17149 Periplasmic sensor domain found in signal transduction proteins OM953_06640 PF00672 HAMP domain OM953_06640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_06640 PF00512 His Kinase A (phospho-acceptor) domain OM953_06640 PF01627 Hpt domain OM953_06640 PF00072 Response regulator receiver domain OM953_06645 PF00072 Response regulator receiver domain OM953_06645 PF13188 PAS domain OM953_06645 PF08448 PAS fold OM953_06645 PF00512 His Kinase A (phospho-acceptor) domain OM953_06645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_06650 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain OM953_06650 PF04616 Glycosyl hydrolases family 43 OM953_06655 PF07715 TonB-dependent Receptor Plug Domain OM953_06655 PF00593 TonB dependent receptor OM953_06660 PF00085 Thioredoxin OM953_06665 PF07237 Protein of unknown function (DUF1428) OM953_06670 PF00512 His Kinase A (phospho-acceptor) domain OM953_06670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_06670 PF13492 GAF domain OM953_06670 PF13493 Domain of unknown function (DUF4118) OM953_06670 PF02702 Osmosensitive K+ channel His kinase sensor domain OM953_06675 PF01339 CheB methylesterase OM953_06680 PF01739 CheR methyltransferase, SAM binding domain OM953_06680 PF03705 CheR methyltransferase, all-alpha domain OM953_06685 PF01627 Hpt domain OM953_06685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_06685 PF00512 His Kinase A (phospho-acceptor) domain OM953_06685 PF00072 Response regulator receiver domain OM953_06685 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) OM953_06685 PF00672 HAMP domain OM953_06690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_06690 PF13426 PAS domain OM953_06690 PF00072 Response regulator receiver domain OM953_06695 PF00072 Response regulator receiver domain OM953_06720 PF06964 Alpha-L-arabinofuranosidase C-terminal domain OM953_06725 PF01263 Aldose 1-epimerase OM953_06730 PF01578 Cytochrome C assembly protein OM953_06735 PF02978 Signal peptide binding domain OM953_06735 PF00448 SRP54-type protein, GTPase domain OM953_06735 PF02881 SRP54-type protein, helical bundle domain OM953_06740 PF03060 Nitronate monooxygenase OM953_06745 PF01063 Amino-transferase class IV OM953_06750 PF00886 Ribosomal protein S16 OM953_06755 PF05239 PRC-barrel domain OM953_06755 PF01782 RimM N-terminal domain OM953_06760 PF01746 tRNA (Guanine-1)-methyltransferase OM953_06765 PF01245 Ribosomal protein L19 OM953_06770 PF01554 MatE OM953_06785 PF01479 S4 domain OM953_06790 PF00141 Peroxidase OM953_06800 PF05192 MutS domain III OM953_06800 PF01624 MutS domain I OM953_06800 PF05188 MutS domain II OM953_06800 PF00488 MutS domain V OM953_06800 PF05190 MutS family domain IV OM953_06810 PF03527 RHS protein OM953_06810 PF05593 RHS Repeat OM953_06840 PF16355 Domain of unknown function (DUF4982) OM953_06840 PF13287 Fn3 associated OM953_06840 PF00703 Glycosyl hydrolases family 2 OM953_06840 PF02836 Glycosyl hydrolases family 2, TIM barrel domain OM953_06840 PF02837 Glycosyl hydrolases family 2, sugar binding domain OM953_06845 PF07745 Glycosyl hydrolase family 53 OM953_06855 PF01381 Helix-turn-helix OM953_06855 PF09856 Predicted transcriptional regulator (DUF2083) OM953_06855 PF06114 IrrE N-terminal-like domain OM953_06860 PF00171 Aldehyde dehydrogenase family OM953_06865 PF02770 Acyl-CoA dehydrogenase, middle domain OM953_06865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OM953_06865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OM953_06870 PF00378 Enoyl-CoA hydratase/isomerase OM953_06875 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain OM953_06875 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain OM953_06875 PF00378 Enoyl-CoA hydratase/isomerase OM953_06880 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase OM953_06880 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase OM953_06885 PF01545 Cation efflux family OM953_06910 PF13276 HTH-like domain OM953_06910 PF13683 Integrase core domain OM953_06915 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain OM953_06915 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain OM953_06915 PF00378 Enoyl-CoA hydratase/isomerase OM953_06920 PF04542 Sigma-70 region 2 OM953_06920 PF08281 Sigma-70, region 4 OM953_06930 PF13180 PDZ domain OM953_06935 PF00009 Elongation factor Tu GTP binding domain OM953_06935 PF03144 Elongation factor Tu domain 2 OM953_06935 PF06421 GTP-binding protein LepA C-terminus OM953_06935 PF00679 Elongation factor G C-terminus OM953_06940 PF10502 Signal peptidase, peptidase S26 OM953_06950 PF00035 Double-stranded RNA binding motif OM953_06950 PF14622 Ribonuclease-III-like OM953_06955 PF07650 KH domain OM953_06955 PF01926 50S ribosome-binding GTPase OM953_06960 PF02565 Recombination protein O C terminal OM953_06960 PF11967 Recombination protein O N terminal OM953_06970 PF05958 tRNA (Uracil-5-)-methyltransferase OM953_06975 PF01928 CYTH domain OM953_06980 PF01323 DSBA-like thioredoxin domain OM953_06985 PF01593 Flavin containing amine oxidoreductase OM953_06990 PF04244 Deoxyribodipyrimidine photo-lyase-related protein OM953_06995 PF00933 Glycosyl hydrolase family 3 N terminal domain OM953_07000 PF00156 Phosphoribosyl transferase domain OM953_07005 PF01048 Phosphorylase superfamily OM953_07010 PF00313 'Cold-shock' DNA-binding domain OM953_07015 PF01494 FAD binding domain OM953_07025 PF00271 Helicase conserved C-terminal domain OM953_07025 PF08494 DEAD/H associated OM953_07025 PF00270 DEAD/DEAH box helicase OM953_07030 PF04675 DNA ligase N terminus OM953_07030 PF01068 ATP dependent DNA ligase domain OM953_07030 PF04679 ATP dependent DNA ligase C terminal region OM953_07040 PF04675 DNA ligase N terminus OM953_07040 PF01068 ATP dependent DNA ligase domain OM953_07040 PF04679 ATP dependent DNA ligase C terminal region OM953_07055 PF00990 Diguanylate cyclase, GGDEF domain OM953_07055 PF00072 Response regulator receiver domain OM953_07075 PF00108 Thiolase, N-terminal domain OM953_07075 PF02803 Thiolase, C-terminal domain OM953_07080 PF12951 Passenger-associated-transport-repeat OM953_07080 PF00082 Subtilase family OM953_07080 PF03797 Autotransporter beta-domain OM953_07085 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase OM953_07085 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain OM953_07100 PF01863 Protein of unknown function DUF45 OM953_07105 PF07043 Protein of unknown function (DUF1328) OM953_07115 PF01258 Prokaryotic dksA/traR C4-type zinc finger OM953_07175 PF16124 RecQ zinc-binding OM953_07175 PF00270 DEAD/DEAH box helicase OM953_07175 PF00570 HRDC domain OM953_07175 PF00271 Helicase conserved C-terminal domain OM953_07175 PF09382 RQC domain OM953_07180 PF00210 Ferritin-like domain OM953_07185 PF00271 Helicase conserved C-terminal domain OM953_07185 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold OM953_07185 PF04408 Helicase associated domain (HA2) OM953_07185 PF11898 Domain of unknown function (DUF3418) OM953_07185 PF00270 DEAD/DEAH box helicase OM953_07200 PF02685 Glucokinase OM953_07215 PF04055 Radical SAM superfamily OM953_07215 PF13186 Iron-sulfur cluster-binding domain OM953_07220 PF05402 Coenzyme PQQ synthesis protein D (PqqD) OM953_07225 PF03070 TENA/THI-4/PQQC family OM953_07230 PF12706 Beta-lactamase superfamily domain OM953_07235 PF08042 PqqA family OM953_07240 PF13291 ACT domain OM953_07240 PF04607 Region found in RelA / SpoT proteins OM953_07240 PF02824 TGS domain OM953_07250 PF00535 Glycosyl transferase family 2 OM953_07250 PF01501 Glycosyl transferase family 8 OM953_07255 PF14814 Bifunctional transglycosylase second domain OM953_07255 PF00905 Penicillin binding protein transpeptidase domain OM953_07255 PF00912 Transglycosylase OM953_07265 PF13307 Helicase C-terminal domain OM953_07265 PF04851 Type III restriction enzyme, res subunit OM953_07270 PF00814 Glycoprotease family OM953_07275 PF03747 ADP-ribosylglycohydrolase OM953_07285 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain OM953_07285 PF02951 Prokaryotic glutathione synthetase, N-terminal domain OM953_07290 PF00072 Response regulator receiver domain OM953_07295 PF00072 Response regulator receiver domain OM953_07300 PF01584 CheW-like domain OM953_07305 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term OM953_07305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM953_07310 PF01627 Hpt domain OM953_07310 PF00072 Response regulator receiver domain OM953_07310 PF01584 CheW-like domain OM953_07310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_07310 PF02895 Signal transducing histidine kinase, homodimeric domain OM953_07325 PF13302 Acetyltransferase (GNAT) domain OM953_07330 PF01112 Asparaginase OM953_07335 PF03932 CutC family OM953_07365 PF01301 Glycosyl hydrolases family 35 OM953_07370 PF07971 Glycosyl hydrolase family 92 OM953_07370 PF17678 Glycosyl hydrolase family 92 N-terminal domain OM953_07380 PF11975 Family 4 glycosyl hydrolase C-terminal domain OM953_07380 PF02056 Family 4 glycosyl hydrolase OM953_07390 PF13520 Amino acid permease OM953_07395 PF01301 Glycosyl hydrolases family 35 OM953_07405 PF14310 Fibronectin type III-like domain OM953_07405 PF00933 Glycosyl hydrolase family 3 N terminal domain OM953_07405 PF01915 Glycosyl hydrolase family 3 C-terminal domain OM953_07405 PF07691 PA14 domain OM953_07415 PF00728 Glycosyl hydrolase family 20, catalytic domain OM953_07415 PF02838 Glycosyl hydrolase family 20, domain 2 OM953_07415 PF07691 PA14 domain OM953_07420 PF01476 LysM domain OM953_07420 PF00704 Glycosyl hydrolases family 18 OM953_07435 PF02685 Glucokinase OM953_07440 PF04452 RNA methyltransferase OM953_07445 PF00202 Aminotransferase class-III OM953_07450 PF00293 NUDIX domain OM953_07455 PF00459 Inositol monophosphatase family OM953_07460 PF03819 MazG nucleotide pyrophosphohydrolase domain OM953_07465 PF02694 Uncharacterised BCR, YnfA/UPF0060 family OM953_07485 PF01571 Aminomethyltransferase folate-binding domain OM953_07485 PF08669 Glycine cleavage T-protein C-terminal barrel domain OM953_07490 PF01597 Glycine cleavage H-protein OM953_07520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OM953_07520 PF09317 Domain of unknown function (DUF1974) OM953_07520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OM953_07525 PF00561 alpha/beta hydrolase fold OM953_07530 PF00440 Bacterial regulatory proteins, tetR family OM953_07540 PF00872 Transposase, Mutator family OM953_07555 PF01430 Hsp33 protein OM953_07560 PF00912 Transglycosylase OM953_07565 PF00535 Glycosyl transferase family 2 OM953_07570 PF00478 IMP dehydrogenase / GMP reductase domain OM953_07570 PF00571 CBS domain OM953_07575 PF05170 AsmA family OM953_07580 PF03006 Haemolysin-III related OM953_07585 PF00009 Elongation factor Tu GTP binding domain OM953_07585 PF16658 Class II release factor RF3, C-terminal domain OM953_07590 PF01551 Peptidase family M23 OM953_07590 PF01476 LysM domain OM953_07590 PF08525 Opacity-associated protein A N-terminal motif OM953_07595 PF00561 alpha/beta hydrolase fold OM953_07600 PF01053 Cys/Met metabolism PLP-dependent enzyme OM953_07605 PF00696 Amino acid kinase family OM953_07605 PF03447 Homoserine dehydrogenase, NAD binding domain OM953_07605 PF00742 Homoserine dehydrogenase OM953_07610 PF12697 Alpha/beta hydrolase family OM953_07615 PF03315 Serine dehydratase beta chain OM953_07615 PF03313 Serine dehydratase alpha chain OM953_07635 PF04264 YceI-like domain OM953_07640 PF00072 Response regulator receiver domain OM953_07640 PF01627 Hpt domain OM953_07640 PF00512 His Kinase A (phospho-acceptor) domain OM953_07640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_07650 PF00512 His Kinase A (phospho-acceptor) domain OM953_07650 PF17149 Periplasmic sensor domain found in signal transduction proteins OM953_07650 PF00072 Response regulator receiver domain OM953_07650 PF01627 Hpt domain OM953_07650 PF00672 HAMP domain OM953_07650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_07655 PF01627 Hpt domain OM953_07655 PF00512 His Kinase A (phospho-acceptor) domain OM953_07655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_07655 PF17149 Periplasmic sensor domain found in signal transduction proteins OM953_07655 PF00072 Response regulator receiver domain OM953_07655 PF00672 HAMP domain OM953_07660 PF07690 Major Facilitator Superfamily OM953_07665 PF01208 Uroporphyrinogen decarboxylase (URO-D) OM953_07675 PF01761 3-dehydroquinate synthase OM953_07680 PF01202 Shikimate kinase OM953_07685 PF01243 Pyridoxamine 5'-phosphate oxidase OM953_07685 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region OM953_07695 PF04012 PspA/IM30 family OM953_07720 PF03738 Glutathionylspermidine synthase preATP-grasp OM953_07730 PF07690 Major Facilitator Superfamily OM953_07735 PF09278 MerR, DNA binding OM953_07735 PF00376 MerR family regulatory protein OM953_07760 PF00872 Transposase, Mutator family OM953_07780 PF04820 Tryptophan halogenase OM953_07785 PF12706 Beta-lactamase superfamily domain OM953_07810 PF00324 Amino acid permease OM953_07815 PF00196 Bacterial regulatory proteins, luxR family OM953_07825 PF00561 alpha/beta hydrolase fold OM953_07830 PF00544 Pectate lyase OM953_07835 PF00324 Amino acid permease OM953_07845 PF01654 Cytochrome bd terminal oxidase subunit I OM953_07850 PF02322 Cytochrome bd terminal oxidase subunit II OM953_07855 PF00756 Putative esterase OM953_07860 PF03448 MgtE intracellular N domain OM953_07860 PF01769 Divalent cation transporter OM953_07860 PF00571 CBS domain OM953_07865 PF05524 PEP-utilising enzyme, N-terminal OM953_07865 PF00391 PEP-utilising enzyme, mobile domain OM953_07865 PF02896 PEP-utilising enzyme, TIM barrel domain OM953_07870 PF00381 PTS HPr component phosphorylation site OM953_07880 PF03668 P-loop ATPase protein family OM953_07885 PF02603 HPr Serine kinase N terminus OM953_07885 PF07475 HPr Serine kinase C-terminal domain OM953_07890 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 OM953_07895 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein OM953_07900 PF04552 Sigma-54, DNA binding domain OM953_07900 PF04963 Sigma-54 factor, core binding domain OM953_07900 PF00309 Sigma-54 factor, Activator interacting domain (AID) OM953_07905 PF00005 ABC transporter OM953_07910 PF03968 OstA-like protein OM953_07925 PF00571 CBS domain OM953_07925 PF01380 SIS domain OM953_07930 PF01722 BolA-like protein OM953_07935 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) OM953_07955 PF00551 Formyl transferase OM953_07965 PF02769 AIR synthase related protein, C-terminal domain OM953_07965 PF00586 AIR synthase related protein, N-terminal domain OM953_07975 PF01594 AI-2E family transporter OM953_07980 PF00308 Bacterial dnaA protein OM953_07985 PF00483 Nucleotidyl transferase OM953_07990 PF01636 Phosphotransferase enzyme family OM953_08015 PF00175 Oxidoreductase NAD-binding domain OM953_08015 PF00667 FAD binding domain OM953_08015 PF00258 Flavodoxin OM953_08020 PF02424 ApbE family OM953_08045 PF13640 2OG-Fe(II) oxygenase superfamily OM953_08045 PF18331 PKHD-type hydroxylase C-terminal domain OM953_08050 PF07715 TonB-dependent Receptor Plug Domain OM953_08050 PF00593 TonB dependent receptor OM953_08055 PF00355 Rieske [2Fe-2S] domain OM953_08065 PF00266 Aminotransferase class-V OM953_08070 PF01458 Uncharacterized protein family (UPF0051) OM953_08075 PF00005 ABC transporter OM953_08080 PF01458 Uncharacterized protein family (UPF0051) OM953_08085 PF02082 Transcriptional regulator OM953_08095 PF01965 DJ-1/PfpI family OM953_08115 PF01551 Peptidase family M23 OM953_08125 PF03807 NADP oxidoreductase coenzyme F420-dependent OM953_08125 PF14748 Pyrroline-5-carboxylate reductase dimerisation OM953_08130 PF01168 Alanine racemase, N-terminal domain OM953_08135 PF00437 Type II/IV secretion system protein OM953_08140 PF00437 Type II/IV secretion system protein OM953_08155 PF00958 GMP synthase C terminal domain OM953_08155 PF00117 Glutamine amidotransferase class-I OM953_08155 PF03352 Methyladenine glycosylase OM953_08155 PF13302 Acetyltransferase (GNAT) domain OM953_08155 PF13673 Acetyltransferase (GNAT) domain OM953_08160 PF02622 Uncharacterized ACR, COG1678 OM953_08165 PF03652 Holliday junction resolvase OM953_08170 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OM953_08170 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OM953_08175 PF02566 OsmC-like protein OM953_08185 PF02567 Phenazine biosynthesis-like protein OM953_08190 PF02567 Phenazine biosynthesis-like protein OM953_08195 PF01842 ACT domain OM953_08195 PF00696 Amino acid kinase family OM953_08210 PF08245 Mur ligase middle domain OM953_08210 PF02875 Mur ligase family, glutamate ligase domain OM953_08225 PF00348 Polyprenyl synthetase OM953_08230 PF00436 Single-strand binding protein family OM953_08240 PF00698 Acyl transferase domain OM953_08240 PF08240 Alcohol dehydrogenase GroES-like domain OM953_08240 PF00107 Zinc-binding dehydrogenase OM953_08240 PF16197 Ketoacyl-synthetase C-terminal extension OM953_08240 PF00109 Beta-ketoacyl synthase, N-terminal domain OM953_08240 PF02801 Beta-ketoacyl synthase, C-terminal domain OM953_08240 PF08659 KR domain OM953_08240 PF00550 Phosphopantetheine attachment site OM953_08240 PF14765 Polyketide synthase dehydratase OM953_08245 PF01799 [2Fe-2S] binding domain OM953_08245 PF00111 2Fe-2S iron-sulfur cluster binding domain OM953_08245 PF10518 TAT (twin-arginine translocation) pathway signal sequence OM953_08250 PF00941 FAD binding domain in molybdopterin dehydrogenase OM953_08250 PF03450 CO dehydrogenase flavoprotein C-terminal domain OM953_08255 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain OM953_08255 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase OM953_08260 PF13478 XdhC Rossmann domain OM953_08260 PF02625 XdhC and CoxI family OM953_08295 PF04328 Selenoprotein, putative OM953_08300 PF02554 Carbon starvation protein CstA OM953_08300 PF13722 5TM C-terminal transporter carbon starvation CstA OM953_08305 PF02678 Pirin OM953_08305 PF05726 Pirin C-terminal cupin domain OM953_08320 PF02678 Pirin OM953_08320 PF05726 Pirin C-terminal cupin domain OM953_08330 PF04493 Endonuclease V OM953_08335 PF00300 Histidine phosphatase superfamily (branch 1) OM953_08345 PF01431 Peptidase family M13 OM953_08345 PF05649 Peptidase family M13 OM953_08350 PF13091 PLD-like domain OM953_08355 PF00072 Response regulator receiver domain OM953_08355 PF01339 CheB methylesterase OM953_08360 PF01739 CheR methyltransferase, SAM binding domain OM953_08360 PF03705 CheR methyltransferase, all-alpha domain OM953_08365 PF13426 PAS domain OM953_08365 PF00990 Diguanylate cyclase, GGDEF domain OM953_08365 PF00563 EAL domain OM953_08370 PF01584 CheW-like domain OM953_08375 PF02203 Tar ligand binding domain homologue OM953_08375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM953_08375 PF00672 HAMP domain OM953_08380 PF02895 Signal transducing histidine kinase, homodimeric domain OM953_08380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_08380 PF09078 CheY binding OM953_08380 PF01584 CheW-like domain OM953_08380 PF01627 Hpt domain OM953_08390 PF00271 Helicase conserved C-terminal domain OM953_08390 PF03461 TRCF domain OM953_08390 PF00270 DEAD/DEAH box helicase OM953_08390 PF17757 UvrB interaction domain OM953_08390 PF02559 CarD-like/TRCF domain OM953_08400 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ OM953_08405 PF00486 Transcriptional regulatory protein, C terminal OM953_08405 PF00072 Response regulator receiver domain OM953_08410 PF00672 HAMP domain OM953_08410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_08410 PF00512 His Kinase A (phospho-acceptor) domain OM953_08420 PF06123 Inner membrane protein CreD OM953_08445 PF00749 tRNA synthetases class I (E and Q), catalytic domain OM953_08450 PF01475 Ferric uptake regulator family OM953_08460 PF00529 HlyD membrane-fusion protein of T1SS OM953_08460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OM953_08465 PF00873 AcrB/AcrD/AcrF family OM953_08470 PF02321 Outer membrane efflux protein OM953_08475 PF00440 Bacterial regulatory proteins, tetR family OM953_08475 PF16859 Tetracyclin repressor-like, C-terminal domain OM953_08485 PF12833 Helix-turn-helix domain OM953_08485 PF06719 AraC-type transcriptional regulator N-terminus OM953_08495 PF03466 LysR substrate binding domain OM953_08495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM953_08500 PF07690 Major Facilitator Superfamily OM953_08505 PF00248 Aldo/keto reductase family OM953_08515 PF00082 Subtilase family OM953_08515 PF01483 Proprotein convertase P-domain OM953_08540 PF03377 TAL effector repeat OM953_08550 PF13406 Transglycosylase SLT domain OM953_08570 PF07715 TonB-dependent Receptor Plug Domain OM953_08570 PF00593 TonB dependent receptor OM953_08590 PF00107 Zinc-binding dehydrogenase OM953_08590 PF08240 Alcohol dehydrogenase GroES-like domain OM953_08595 PF00654 Voltage gated chloride channel OM953_08605 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain OM953_08605 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain OM953_08610 PF00730 HhH-GPD superfamily base excision DNA repair protein OM953_08610 PF06029 AlkA N-terminal domain OM953_08610 PF02805 Metal binding domain of Ada OM953_08610 PF12833 Helix-turn-helix domain OM953_08650 PF04542 Sigma-70 region 2 OM953_08650 PF08281 Sigma-70, region 4 OM953_08655 PF00270 DEAD/DEAH box helicase OM953_08655 PF00271 Helicase conserved C-terminal domain OM953_08655 PF03880 DbpA RNA binding domain OM953_08660 PF00563 EAL domain OM953_08660 PF00990 Diguanylate cyclase, GGDEF domain OM953_08660 PF08448 PAS fold OM953_08665 PF01479 S4 domain OM953_08665 PF00849 RNA pseudouridylate synthase OM953_08670 PF00990 Diguanylate cyclase, GGDEF domain OM953_08685 PF03737 Aldolase/RraA OM953_08690 PF00144 Beta-lactamase OM953_08695 PF00999 Sodium/hydrogen exchanger family OM953_08700 PF00672 HAMP domain OM953_08700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_08700 PF00512 His Kinase A (phospho-acceptor) domain OM953_08705 PF00486 Transcriptional regulatory protein, C terminal OM953_08705 PF00072 Response regulator receiver domain OM953_08710 PF02321 Outer membrane efflux protein OM953_08725 PF00873 AcrB/AcrD/AcrF family OM953_08735 PF00005 ABC transporter OM953_08735 PF00664 ABC transporter transmembrane region OM953_08765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM953_08765 PF03466 LysR substrate binding domain OM953_08775 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD OM953_08780 PF04070 Domain of unknown function (DUF378) OM953_08820 PF00085 Thioredoxin OM953_08830 PF13603 Leucyl-tRNA synthetase, Domain 2 OM953_08830 PF08264 Anticodon-binding domain of tRNA OM953_08830 PF00133 tRNA synthetases class I (I, L, M and V) OM953_08845 PF01467 Cytidylyltransferase-like OM953_08860 PF02590 Predicted SPOUT methyltransferase OM953_08875 PF04402 Protein of unknown function (DUF541) OM953_08880 PF02545 Maf-like protein OM953_08885 PF00575 S1 RNA binding domain OM953_08885 PF10150 Ribonuclease E/G family OM953_08890 PF13116 Protein of unknown function OM953_08890 PF13502 AsmA-like C-terminal region OM953_08900 PF01523 Putative modulator of DNA gyrase OM953_08905 PF04751 Protein of unknown function (DUF615) OM953_08910 PF01523 Putative modulator of DNA gyrase OM953_08920 PF14521 Lysine-specific metallo-endopeptidase OM953_08925 PF00348 Polyprenyl synthetase OM953_08930 PF02609 Exonuclease VII small subunit OM953_08935 PF09179 TilS substrate binding domain OM953_08935 PF11734 TilS substrate C-terminal domain OM953_08935 PF01171 PP-loop family OM953_08940 PF00245 Alkaline phosphatase OM953_08945 PF00375 Sodium:dicarboxylate symporter family OM953_08960 PF00877 NlpC/P60 family OM953_08965 PF00877 NlpC/P60 family OM953_08970 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase OM953_08975 PF04235 Protein of unknown function (DUF418) OM953_08980 PF01266 FAD dependent oxidoreductase OM953_08985 PF07992 Pyridine nucleotide-disulphide oxidoreductase OM953_08985 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain OM953_08990 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain OM953_09005 PF01431 Peptidase family M13 OM953_09005 PF05649 Peptidase family M13 OM953_09010 PF01431 Peptidase family M13 OM953_09010 PF05649 Peptidase family M13 OM953_09025 PF07715 TonB-dependent Receptor Plug Domain OM953_09025 PF00593 TonB dependent receptor OM953_09030 PF10609 NUBPL iron-transfer P-loop NTPase OM953_09035 PF00692 dUTPase OM953_09055 PF01738 Dienelactone hydrolase family OM953_09060 PF04055 Radical SAM superfamily OM953_09060 PF18693 TRAM domain OM953_09060 PF00919 Uncharacterized protein family UPF0004 OM953_09065 PF01272 Transcription elongation factor, GreA/GreB, C-term OM953_09065 PF03449 Transcription elongation factor, N-terminal OM953_09080 PF00293 NUDIX domain OM953_09085 PF05872 Bacterial protein of unknown function (DUF853) OM953_09095 PF02666 Phosphatidylserine decarboxylase OM953_09100 PF02630 SCO1/SenC OM953_09105 PF05175 Methyltransferase small domain OM953_09110 PF01264 Chorismate synthase OM953_09115 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain OM953_09115 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain OM953_09120 PF02774 Semialdehyde dehydrogenase, dimerisation domain OM953_09120 PF01118 Semialdehyde dehydrogenase, NAD binding domain OM953_09135 PF01416 tRNA pseudouridine synthase OM953_09140 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase OM953_09145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM953_09145 PF03466 LysR substrate binding domain OM953_09150 PF00291 Pyridoxal-phosphate dependent enzyme OM953_09160 PF00290 Tryptophan synthase alpha chain OM953_09165 PF17848 Acetyl-coA carboxylase zinc finger domain OM953_09165 PF01039 Carboxyl transferase domain OM953_09170 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III OM953_09170 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I OM953_09170 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain OM953_09170 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II OM953_09185 PF03707 Bacterial signalling protein N terminal repeat OM953_09185 PF00563 EAL domain OM953_09185 PF00990 Diguanylate cyclase, GGDEF domain OM953_09200 PF00106 short chain dehydrogenase OM953_09205 PF00121 Triosephosphate isomerase OM953_09220 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 OM953_09225 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit OM953_09230 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit OM953_09235 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit OM953_09245 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit OM953_09245 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region OM953_09245 PF10531 SLBB domain OM953_09250 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region OM953_09250 PF00384 Molybdopterin oxidoreductase OM953_09250 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal OM953_09255 PF00146 NADH dehydrogenase OM953_09260 PF12838 4Fe-4S dicluster domain OM953_09265 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 OM953_09270 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L OM953_09275 PF00361 Proton-conducting membrane transporter OM953_09275 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus OM953_09280 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus OM953_09280 PF00361 Proton-conducting membrane transporter OM953_09285 PF00361 Proton-conducting membrane transporter OM953_09295 PF02576 RimP N-terminal domain OM953_09295 PF17384 RimP C-terminal SH3 domain OM953_09300 PF13184 NusA-like KH domain OM953_09300 PF08529 NusA N-terminal domain OM953_09300 PF00575 S1 RNA binding domain OM953_09305 PF04760 Translation initiation factor IF-2, N-terminal region OM953_09305 PF08364 Bacterial translation initiation factor IF-2 associated region OM953_09305 PF11987 Translation-initiation factor 2 OM953_09305 PF00009 Elongation factor Tu GTP binding domain OM953_09310 PF02033 Ribosome-binding factor A OM953_09315 PF01509 TruB family pseudouridylate synthase (N terminal domain) OM953_09315 PF09157 Pseudouridine synthase II TruB, C-terminal OM953_09315 PF16198 tRNA pseudouridylate synthase B C-terminal domain OM953_09320 PF00312 Ribosomal protein S15 OM953_09325 PF00013 KH domain OM953_09325 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain OM953_09325 PF01138 3' exoribonuclease family, domain 1 OM953_09325 PF03725 3' exoribonuclease family, domain 2 OM953_09325 PF00575 S1 RNA binding domain OM953_09335 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain OM953_09335 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain OM953_09345 PF00731 AIR carboxylase OM953_09350 PF02222 ATP-grasp domain OM953_09350 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain OM953_09355 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain OM953_09355 PF02777 Iron/manganese superoxide dismutases, C-terminal domain OM953_09360 PF00462 Glutaredoxin OM953_09370 PF01914 MarC family integral membrane protein OM953_09375 PF00593 TonB dependent receptor OM953_09380 PF11892 Domain of unknown function (DUF3412) OM953_09380 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases OM953_09380 PF03641 Possible lysine decarboxylase OM953_09385 PF07963 Prokaryotic N-terminal methylation motif OM953_09405 PF05567 Neisseria PilC beta-propeller domain OM953_09420 PF07963 Prokaryotic N-terminal methylation motif OM953_09420 PF00114 Pilin (bacterial filament) OM953_09425 PF04851 Type III restriction enzyme, res subunit OM953_09425 PF12344 Ultra-violet resistance protein B OM953_09425 PF17757 UvrB interaction domain OM953_09425 PF00271 Helicase conserved C-terminal domain OM953_09425 PF02151 UvrB/uvrC motif OM953_09545 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system OM953_09555 PF00589 Phage integrase family OM953_09565 PF02534 Type IV secretory system Conjugative DNA transfer OM953_09585 PF03743 Bacterial conjugation TrbI-like protein OM953_09590 PF00437 Type II/IV secretion system protein OM953_09595 PF01464 Transglycosylase SLT domain OM953_09605 PF05101 Type IV secretory pathway, VirB3-like protein OM953_09610 PF03135 CagE, TrbE, VirB family, component of type IV transporter system OM953_09640 PF00128 Alpha amylase, catalytic domain OM953_09655 PF10566 Glycoside hydrolase 97 OM953_09655 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation OM953_09655 PF14508 Glycosyl-hydrolase 97 N-terminal OM953_09665 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 OM953_09670 PF00128 Alpha amylase, catalytic domain OM953_09670 PF00686 Starch binding domain OM953_09675 PF00356 Bacterial regulatory proteins, lacI family OM953_09680 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain OM953_09680 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) OM953_09680 PF03129 Anticodon binding domain OM953_09680 PF02824 TGS domain OM953_09685 PF05198 Translation initiation factor IF-3, N-terminal domain OM953_09685 PF00707 Translation initiation factor IF-3, C-terminal domain OM953_09690 PF01632 Ribosomal protein L35 OM953_09695 PF00453 Ribosomal protein L20 OM953_09700 PF01409 tRNA synthetases class II core domain (F) OM953_09700 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain OM953_09705 PF03483 B3/4 domain OM953_09705 PF03484 tRNA synthetase B5 domain OM953_09705 PF03147 Ferredoxin-fold anticodon binding domain OM953_09705 PF01588 Putative tRNA binding domain OM953_09705 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain OM953_09710 PF00216 Bacterial DNA-binding protein OM953_09715 PF13411 MerR HTH family regulatory protein OM953_09735 PF02397 Bacterial sugar transferase OM953_09755 PF00534 Glycosyl transferases group 1 OM953_09755 PF13439 Glycosyltransferase Family 4 OM953_09765 PF14667 Polysaccharide biosynthesis C-terminal domain OM953_09780 PF03808 Glycosyl transferase WecB/TagA/CpsF family OM953_09795 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III OM953_09795 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal OM953_09800 PF16123 Hydroxyacylglutathione hydrolase C-terminus OM953_09800 PF00753 Metallo-beta-lactamase superfamily OM953_09805 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family OM953_09825 PF13292 1-deoxy-D-xylulose-5-phosphate synthase OM953_09825 PF02779 Transketolase, pyrimidine binding domain OM953_09825 PF02780 Transketolase, C-terminal domain OM953_09835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OM953_09835 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OM953_09835 PF12806 Acetyl-CoA dehydrogenase C-terminal like OM953_09835 PF02770 Acyl-CoA dehydrogenase, middle domain OM953_09845 PF08212 Lipocalin-like domain OM953_09875 PF00072 Response regulator receiver domain OM953_09875 PF13426 PAS domain OM953_09875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_09880 PF04362 Bacterial Fe(2+) trafficking OM953_09885 PF00633 Helix-hairpin-helix motif OM953_09885 PF10576 Iron-sulfur binding domain of endonuclease III OM953_09885 PF14815 NUDIX domain OM953_09885 PF00730 HhH-GPD superfamily base excision DNA repair protein OM953_09900 PF05544 Proline racemase OM953_09905 PF01266 FAD dependent oxidoreductase OM953_09915 PF04324 BFD-like [2Fe-2S] binding domain OM953_09915 PF07992 Pyridine nucleotide-disulphide oxidoreductase OM953_09920 PF00701 Dihydrodipicolinate synthetase family OM953_09925 PF00171 Aldehyde dehydrogenase family OM953_09930 PF00557 Metallopeptidase family M24 OM953_09930 PF01321 Creatinase/Prolidase N-terminal domain OM953_09945 PF13520 Amino acid permease OM953_09970 PF09286 Pro-kumamolisin, activation domain OM953_09970 PF00082 Subtilase family OM953_09980 PF00593 TonB dependent receptor OM953_09980 PF07715 TonB-dependent Receptor Plug Domain OM953_09985 PF07532 Bacterial Ig-like domain (group 4) OM953_09990 PF04616 Glycosyl hydrolases family 43 OM953_10000 PF07715 TonB-dependent Receptor Plug Domain OM953_10000 PF00593 TonB dependent receptor OM953_10050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_10050 PF00183 Hsp90 protein OM953_10060 PF01467 Cytidylyltransferase-like OM953_10070 PF00037 4Fe-4S binding domain OM953_10080 PF02927 Cellulase N-terminal ig-like domain OM953_10080 PF00759 Glycosyl hydrolase family 9 OM953_10120 PF02547 Queuosine biosynthesis protein OM953_10125 PF01702 Queuine tRNA-ribosyltransferase OM953_10130 PF02699 Preprotein translocase subunit OM953_10135 PF07549 SecD/SecF GG Motif OM953_10135 PF13721 SecD export protein N-terminal TM region OM953_10135 PF02355 Protein export membrane protein OM953_10140 PF02355 Protein export membrane protein OM953_10140 PF07549 SecD/SecF GG Motif OM953_10170 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit OM953_10175 PF00294 pfkB family carbohydrate kinase OM953_10180 PF00381 PTS HPr component phosphorylation site OM953_10180 PF05524 PEP-utilising enzyme, N-terminal OM953_10180 PF00391 PEP-utilising enzyme, mobile domain OM953_10180 PF02896 PEP-utilising enzyme, TIM barrel domain OM953_10180 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 OM953_10185 PF00356 Bacterial regulatory proteins, lacI family OM953_10190 PF00873 AcrB/AcrD/AcrF family OM953_10195 PF00529 HlyD membrane-fusion protein of T1SS OM953_10195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OM953_10205 PF05088 Bacterial NAD-glutamate dehydrogenase OM953_10210 PF07690 Major Facilitator Superfamily OM953_10220 PF00072 Response regulator receiver domain OM953_10225 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) OM953_10225 PF00672 HAMP domain OM953_10225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_10225 PF00512 His Kinase A (phospho-acceptor) domain OM953_10225 PF01627 Hpt domain OM953_10225 PF00072 Response regulator receiver domain OM953_10230 PF04286 Protein of unknown function (DUF445) OM953_10240 PF00202 Aminotransferase class-III OM953_10245 PF07690 Major Facilitator Superfamily OM953_10250 PF02634 FdhD/NarQ family OM953_10255 PF00384 Molybdopterin oxidoreductase OM953_10265 PF07690 Major Facilitator Superfamily OM953_10265 PF00083 Sugar (and other) transporter OM953_10270 PF01814 Hemerythrin HHE cation binding domain OM953_10275 PF00990 Diguanylate cyclase, GGDEF domain OM953_10275 PF00072 Response regulator receiver domain OM953_10280 PF01266 FAD dependent oxidoreductase OM953_10285 PF00120 Glutamine synthetase, catalytic domain OM953_10295 PF00120 Glutamine synthetase, catalytic domain OM953_10300 PF00202 Aminotransferase class-III OM953_10305 PF13416 Bacterial extracellular solute-binding protein OM953_10310 PF13533 Biotin-lipoyl like OM953_10315 PF07690 Major Facilitator Superfamily OM953_10320 PF02321 Outer membrane efflux protein OM953_10325 PF00005 ABC transporter OM953_10325 PF08402 TOBE domain OM953_10335 PF00528 Binding-protein-dependent transport system inner membrane component OM953_10340 PF00528 Binding-protein-dependent transport system inner membrane component OM953_10345 PF00171 Aldehyde dehydrogenase family OM953_10360 PF03471 Transporter associated domain OM953_10360 PF00571 CBS domain OM953_10370 PF02130 Uncharacterized protein family UPF0054 OM953_10380 PF02562 PhoH-like protein OM953_10385 PF04055 Radical SAM superfamily OM953_10385 PF01938 TRAM domain OM953_10385 PF00919 Uncharacterized protein family UPF0004 OM953_10400 PF01464 Transglycosylase SLT domain OM953_10405 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal OM953_10405 PF00355 Rieske [2Fe-2S] domain OM953_10410 PF00033 Cytochrome b/b6/petB OM953_10410 PF00032 Cytochrome b(C-terminal)/b6/petD OM953_10415 PF02167 Cytochrome C1 family OM953_10420 PF00043 Glutathione S-transferase, C-terminal domain OM953_10420 PF02798 Glutathione S-transferase, N-terminal domain OM953_10425 PF04386 Stringent starvation protein B OM953_10445 PF00270 DEAD/DEAH box helicase OM953_10445 PF08494 DEAD/H associated OM953_10445 PF00271 Helicase conserved C-terminal domain OM953_10450 PF02245 Methylpurine-DNA glycosylase (MPG) OM953_10455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM953_10455 PF00672 HAMP domain OM953_10455 PF02743 Cache domain OM953_10460 PF01584 CheW-like domain OM953_10500 PF03837 RecT family OM953_10590 PF03796 DnaB-like helicase C terminal domain OM953_10590 PF00772 DnaB-like helicase N terminal domain OM953_10625 PF00872 Transposase, Mutator family OM953_10795 PF13356 Arm DNA-binding domain OM953_10795 PF00589 Phage integrase family OM953_10815 PF04679 ATP dependent DNA ligase C terminal region OM953_10815 PF01068 ATP dependent DNA ligase domain OM953_10815 PF13298 DNA polymerase Ligase (LigD) OM953_10820 PF01612 3'-5' exonuclease OM953_10820 PF00570 HRDC domain OM953_10830 PF03781 Sulfatase-modifying factor enzyme 1 OM953_10840 PF02601 Exonuclease VII, large subunit OM953_10840 PF13742 OB-fold nucleic acid binding domain OM953_10845 PF08331 Domain of unknown function (DUF1730) OM953_10850 PF01256 Carbohydrate kinase OM953_10850 PF03853 YjeF-related protein N-terminus OM953_10855 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE OM953_10860 PF11741 AMIN domain OM953_10860 PF01520 N-acetylmuramoyl-L-alanine amidase OM953_10865 PF01119 DNA mismatch repair protein, C-terminal domain OM953_10865 PF08676 MutL C terminal dimerisation domain OM953_10885 PF07879 PHB/PHA accumulation regulator DNA-binding domain OM953_10885 PF05233 PHB accumulation regulatory domain OM953_10890 PF00106 short chain dehydrogenase OM953_10895 PF00749 tRNA synthetases class I (E and Q), catalytic domain OM953_10900 PF01435 Peptidase family M48 OM953_10905 PF00563 EAL domain OM953_10905 PF00072 Response regulator receiver domain OM953_10905 PF00990 Diguanylate cyclase, GGDEF domain OM953_10915 PF07152 YaeQ protein OM953_10920 PF00313 'Cold-shock' DNA-binding domain OM953_10925 PF14497 Glutathione S-transferase, C-terminal domain OM953_10925 PF02798 Glutathione S-transferase, N-terminal domain OM953_10930 PF07859 alpha/beta hydrolase fold OM953_10935 PF02696 Uncharacterized ACR, YdiU/UPF0061 family OM953_10940 PF00156 Phosphoribosyl transferase domain OM953_10945 PF03880 DbpA RNA binding domain OM953_10945 PF00270 DEAD/DEAH box helicase OM953_10945 PF00271 Helicase conserved C-terminal domain OM953_10950 PF12848 ABC transporter OM953_10950 PF16326 ABC transporter C-terminal domain OM953_10950 PF00005 ABC transporter OM953_10960 PF00545 ribonuclease OM953_10965 PF02777 Iron/manganese superoxide dismutases, C-terminal domain OM953_10965 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain OM953_10970 PF00459 Inositol monophosphatase family OM953_10975 PF00588 SpoU rRNA Methylase family OM953_10985 PF00563 EAL domain OM953_10985 PF00990 Diguanylate cyclase, GGDEF domain OM953_10985 PF13188 PAS domain OM953_10985 PF03707 Bacterial signalling protein N terminal repeat OM953_10990 PF04055 Radical SAM superfamily OM953_10995 PF09285 Elongation factor P, C-terminal OM953_10995 PF01132 Elongation factor P (EF-P) OB domain OM953_10995 PF08207 Elongation factor P (EF-P) KOW-like domain OM953_11005 PF01979 Amidohydrolase family OM953_11015 PF13419 Haloacid dehalogenase-like hydrolase OM953_11025 PF00295 Glycosyl hydrolases family 28 OM953_11055 PF00753 Metallo-beta-lactamase superfamily OM953_11065 PF05985 Ethanolamine ammonia-lyase light chain (EutC) OM953_11070 PF06751 Ethanolamine ammonia lyase large subunit (EutB) OM953_11080 PF08460 Bacterial SH3 domain OM953_11080 PF01551 Peptidase family M23 OM953_11085 PF01979 Amidohydrolase family OM953_11090 PF01809 Putative membrane protein insertion efficiency factor OM953_11095 PF01258 Prokaryotic dksA/traR C4-type zinc finger OM953_11105 PF02657 Fe-S metabolism associated domain OM953_11110 PF01406 tRNA synthetases class I (C) catalytic domain OM953_11110 PF09190 DALR domain OM953_11120 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OM953_11120 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OM953_11125 PF00764 Arginosuccinate synthase OM953_11135 PF01546 Peptidase family M20/M25/M40 OM953_11135 PF07687 Peptidase dimerisation domain OM953_11140 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase OM953_11140 PF00696 Amino acid kinase family OM953_11150 PF01118 Semialdehyde dehydrogenase, NAD binding domain OM953_11155 PF00206 Lyase OM953_11165 PF00696 Amino acid kinase family OM953_11165 PF01472 PUA domain OM953_11170 PF00171 Aldehyde dehydrogenase family OM953_11180 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain OM953_11180 PF02129 X-Pro dipeptidyl-peptidase (S15 family) OM953_11200 PF02322 Cytochrome bd terminal oxidase subunit II OM953_11205 PF01654 Cytochrome bd terminal oxidase subunit I OM953_11210 PF00005 ABC transporter OM953_11210 PF00664 ABC transporter transmembrane region OM953_11215 PF00664 ABC transporter transmembrane region OM953_11215 PF00005 ABC transporter OM953_11220 PF00313 'Cold-shock' DNA-binding domain OM953_11225 PF00561 alpha/beta hydrolase fold OM953_11235 PF03918 Cytochrome C biogenesis protein OM953_11240 PF08534 Redoxin OM953_11245 PF01578 Cytochrome C assembly protein OM953_11245 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal OM953_11250 PF03100 CcmE OM953_11260 PF01578 Cytochrome C assembly protein OM953_11265 PF03379 CcmB protein OM953_11270 PF00005 ABC transporter OM953_11275 PF00155 Aminotransferase class I and II OM953_11280 PF00795 Carbon-nitrogen hydrolase OM953_11295 PF01479 S4 domain OM953_11295 PF00849 RNA pseudouridylate synthase OM953_11300 PF04079 Segregation and condensation complex subunit ScpB OM953_11305 PF02616 Segregation and condensation protein ScpA OM953_11310 PF03795 YCII-related domain OM953_11320 PF00356 Bacterial regulatory proteins, lacI family OM953_11340 PF00528 Binding-protein-dependent transport system inner membrane component OM953_11345 PF00528 Binding-protein-dependent transport system inner membrane component OM953_11370 PF00795 Carbon-nitrogen hydrolase OM953_11375 PF04371 Porphyromonas-type peptidyl-arginine deiminase OM953_11385 PF00444 Ribosomal protein L36 OM953_11390 PF02224 Cytidylate kinase OM953_11395 PF00575 S1 RNA binding domain OM953_11400 PF00216 Bacterial DNA-binding protein OM953_11410 PF18073 Rubredoxin metal binding domain OM953_11415 PF00953 Glycosyl transferase family 4 OM953_11420 PF02719 Polysaccharide biosynthesis protein OM953_11425 PF00483 Nucleotidyl transferase OM953_11430 PF02254 TrkA-N domain OM953_11430 PF00999 Sodium/hydrogen exchanger family OM953_11440 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain OM953_11440 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain OM953_11445 PF00571 CBS domain OM953_11445 PF00478 IMP dehydrogenase / GMP reductase domain OM953_11450 PF00117 Glutamine amidotransferase class-I OM953_11450 PF00958 GMP synthase C terminal domain OM953_11450 PF02540 NAD synthase OM953_11455 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) OM953_11460 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus OM953_11460 PF00361 Proton-conducting membrane transporter OM953_11460 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus OM953_11465 PF03466 LysR substrate binding domain OM953_11465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM953_11480 PF00196 Bacterial regulatory proteins, luxR family OM953_11480 PF00072 Response regulator receiver domain OM953_11495 PF12833 Helix-turn-helix domain OM953_11500 PF00857 Isochorismatase family OM953_11510 PF07969 Amidohydrolase family OM953_11515 PF05977 Transmembrane secretion effector OM953_11530 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases OM953_11530 PF10414 Sirohaem synthase dimerisation region OM953_11530 PF14824 Sirohaem biosynthesis protein central OM953_11545 PF05974 Domain of unknown function (DUF892) OM953_11565 PF08447 PAS fold OM953_11565 PF00990 Diguanylate cyclase, GGDEF domain OM953_11565 PF08448 PAS fold OM953_11565 PF00563 EAL domain OM953_11575 PF00196 Bacterial regulatory proteins, luxR family OM953_11575 PF00072 Response regulator receiver domain OM953_11580 PF08448 PAS fold OM953_11580 PF00072 Response regulator receiver domain OM953_11580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_11580 PF00512 His Kinase A (phospho-acceptor) domain OM953_11580 PF13426 PAS domain OM953_11590 PF00873 AcrB/AcrD/AcrF family OM953_11595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OM953_11600 PF03797 Autotransporter beta-domain OM953_11600 PF00082 Subtilase family OM953_11615 PF07694 5TMR of 5TMR-LYT OM953_11615 PF13492 GAF domain OM953_11615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_11615 PF06580 Histidine kinase OM953_11620 PF04397 LytTr DNA-binding domain OM953_11620 PF00072 Response regulator receiver domain OM953_11630 PF00144 Beta-lactamase OM953_11640 PF07995 Glucose / Sorbosone dehydrogenase OM953_11645 PF01408 Oxidoreductase family, NAD-binding Rossmann fold OM953_11655 PF09335 SNARE associated Golgi protein OM953_11660 PF01494 FAD binding domain OM953_11665 PF13581 Histidine kinase-like ATPase domain OM953_11665 PF07536 HWE histidine kinase OM953_11665 PF13426 PAS domain OM953_11695 PF05114 Protein of unknown function (DUF692) OM953_11720 PF13406 Transglycosylase SLT domain OM953_11730 PF03377 TAL effector repeat OM953_11760 PF00106 short chain dehydrogenase OM953_11765 PF05199 GMC oxidoreductase OM953_11765 PF00732 GMC oxidoreductase OM953_11770 PF12697 Alpha/beta hydrolase family OM953_11770 PF08241 Methyltransferase domain OM953_11815 PF01106 NifU-like domain OM953_11820 PF01329 Pterin 4 alpha carbinolamine dehydratase OM953_11830 PF02535 ZIP Zinc transporter OM953_11835 PF11737 Protein of unknown function (DUF3300) OM953_11840 PF00849 RNA pseudouridylate synthase OM953_11840 PF01479 S4 domain OM953_11845 PF00575 S1 RNA binding domain OM953_11845 PF12111 Polyribonucleotide phosphorylase C terminal OM953_11845 PF10150 Ribonuclease E/G family OM953_11850 PF00072 Response regulator receiver domain OM953_11850 PF00196 Bacterial regulatory proteins, luxR family OM953_11855 PF00581 Rhodanese-like domain OM953_11855 PF17773 UPF0176 acylphosphatase like domain OM953_11865 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase OM953_11875 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain OM953_11875 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain OM953_11875 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain OM953_11900 PF01066 CDP-alcohol phosphatidyltransferase OM953_11905 PF02151 UvrB/uvrC motif OM953_11905 PF01541 GIY-YIG catalytic domain OM953_11905 PF08459 UvrC Helix-hairpin-helix N-terminal OM953_11915 PF01451 Low molecular weight phosphotyrosine protein phosphatase OM953_11920 PF02348 Cytidylyltransferase OM953_11925 PF02606 Tetraacyldisaccharide-1-P 4'-kinase OM953_11930 PF00664 ABC transporter transmembrane region OM953_11930 PF00005 ABC transporter OM953_11935 PF02472 Biopolymer transport protein ExbD/TolR OM953_11940 PF01618 MotA/TolQ/ExbB proton channel family OM953_11945 PF03772 Competence protein OM953_11945 PF00753 Metallo-beta-lactamase superfamily OM953_11955 PF00005 ABC transporter OM953_11960 PF02687 FtsX-like permease family OM953_11960 PF12704 MacB-like periplasmic core domain OM953_11970 PF03937 Flavinator of succinate dehydrogenase OM953_11975 PF13085 2Fe-2S iron-sulfur cluster binding domain OM953_11985 PF00890 FAD binding domain OM953_11985 PF02910 Fumarate reductase flavoprotein C-term OM953_11990 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit OM953_11995 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit OM953_12005 PF01571 Aminomethyltransferase folate-binding domain OM953_12010 PF00005 ABC transporter OM953_12010 PF17912 MalK OB fold domain OM953_12015 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain OM953_12015 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain OM953_12020 PF02685 Glucokinase OM953_12025 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase OM953_12030 PF00920 Dehydratase family OM953_12035 PF01081 KDPG and KHG aldolase OM953_12040 PF00873 AcrB/AcrD/AcrF family OM953_12045 PF00873 AcrB/AcrD/AcrF family OM953_12050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OM953_12060 PF00034 Cytochrome c OM953_12100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_12100 PF00512 His Kinase A (phospho-acceptor) domain OM953_12100 PF09308 LuxQ, periplasmic OM953_12100 PF00072 Response regulator receiver domain OM953_12105 PF17674 HHH domain OM953_12105 PF00575 S1 RNA binding domain OM953_12105 PF16921 Tex protein YqgF-like domain OM953_12105 PF09371 Tex-like protein N-terminal domain OM953_12115 PF01266 FAD dependent oxidoreductase OM953_12115 PF00355 Rieske [2Fe-2S] domain OM953_12130 PF00561 alpha/beta hydrolase fold OM953_12140 PF01066 CDP-alcohol phosphatidyltransferase OM953_12160 PF03618 Kinase/pyrophosphorylase OM953_12165 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain OM953_12165 PF02896 PEP-utilising enzyme, TIM barrel domain OM953_12165 PF00391 PEP-utilising enzyme, mobile domain OM953_12170 PF00924 Mechanosensitive ion channel OM953_12170 PF05552 Conserved TM helix OM953_12175 PF00929 Exonuclease OM953_12180 PF14437 MafB19-like deaminase OM953_12185 PF02742 Iron dependent repressor, metal binding and dimerisation domain OM953_12185 PF01325 Iron dependent repressor, N-terminal DNA binding domain OM953_12190 PF01566 Natural resistance-associated macrophage protein OM953_12195 PF00561 alpha/beta hydrolase fold OM953_12220 PF12804 MobA-like NTP transferase domain OM953_12225 PF03454 MoeA C-terminal region (domain IV) OM953_12225 PF03453 MoeA N-terminal region (domain I and II) OM953_12225 PF00994 Probable molybdopterin binding domain OM953_12235 PF03372 Endonuclease/Exonuclease/phosphatase family OM953_12245 PF08240 Alcohol dehydrogenase GroES-like domain OM953_12245 PF13823 Alcohol dehydrogenase GroES-associated OM953_12245 PF00107 Zinc-binding dehydrogenase OM953_12275 PF00899 ThiF family OM953_12280 PF03453 MoeA N-terminal region (domain I and II) OM953_12280 PF03454 MoeA C-terminal region (domain IV) OM953_12280 PF00994 Probable molybdopterin binding domain OM953_12285 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal OM953_12285 PF01926 50S ribosome-binding GTPase OM953_12290 PF01011 PQQ enzyme repeat OM953_12290 PF13360 PQQ-like domain OM953_12300 PF13464 Domain of unknown function (DUF4115) OM953_12310 PF04055 Radical SAM superfamily OM953_12315 PF00334 Nucleoside diphosphate kinase OM953_12325 PF00378 Enoyl-CoA hydratase/isomerase OM953_12325 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain OM953_12325 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain OM953_12330 PF02803 Thiolase, C-terminal domain OM953_12330 PF00108 Thiolase, N-terminal domain OM953_12335 PF02537 CrcB-like protein, Camphor Resistance (CrcB) OM953_12340 PF12002 MgsA AAA+ ATPase C terminal OM953_12340 PF00004 ATPase family associated with various cellular activities (AAA) OM953_12340 PF16193 AAA C-terminal domain OM953_12350 PF03548 Outer membrane lipoprotein carrier protein LolA OM953_12360 PF09397 Ftsk gamma domain OM953_12360 PF17854 FtsK alpha domain OM953_12360 PF13491 4TM region of DNA translocase FtsK/SpoIIIE OM953_12360 PF01580 FtsK/SpoIIIE family OM953_12365 PF07992 Pyridine nucleotide-disulphide oxidoreductase OM953_12375 PF03588 Leucyl/phenylalanyl-tRNA protein transferase OM953_12380 PF01176 Translation initiation factor 1A / IF-1 OM953_12385 PF00004 ATPase family associated with various cellular activities (AAA) OM953_12385 PF07724 AAA domain (Cdc48 subfamily) OM953_12385 PF02861 Clp amino terminal domain, pathogenicity island component OM953_12385 PF10431 C-terminal, D2-small domain, of ClpB protein OM953_12385 PF17871 AAA lid domain OM953_12390 PF02617 ATP-dependent Clp protease adaptor protein ClpS OM953_12395 PF00293 NUDIX domain OM953_12405 PF04356 Protein of unknown function (DUF489) OM953_12410 PF12729 Four helix bundle sensory module for signal transduction OM953_12410 PF00672 HAMP domain OM953_12410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM953_12430 PF07730 Histidine kinase OM953_12430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_12435 PF00563 EAL domain OM953_12435 PF03707 Bacterial signalling protein N terminal repeat OM953_12435 PF00990 Diguanylate cyclase, GGDEF domain OM953_12440 PF00512 His Kinase A (phospho-acceptor) domain OM953_12440 PF00989 PAS fold OM953_12440 PF13188 PAS domain OM953_12440 PF13426 PAS domain OM953_12440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_12465 PF00072 Response regulator receiver domain OM953_12465 PF01584 CheW-like domain OM953_12475 PF00460 Flagella basal body rod protein OM953_12475 PF06429 Flagellar basal body rod FlgEFG protein C-terminal OM953_12480 PF03963 Flagellar hook capping protein - N-terminal region OM953_12485 PF07559 Flagellar basal body protein FlaE OM953_12485 PF00460 Flagella basal body rod protein OM953_12485 PF06429 Flagellar basal body rod FlgEFG protein C-terminal OM953_12490 PF06429 Flagellar basal body rod FlgEFG protein C-terminal OM953_12490 PF00460 Flagella basal body rod protein OM953_12495 PF00460 Flagella basal body rod protein OM953_12495 PF06429 Flagellar basal body rod FlgEFG protein C-terminal OM953_12500 PF02107 Flagellar L-ring protein OM953_12505 PF02119 Flagellar P-ring protein OM953_12510 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase OM953_12510 PF10135 Rod binding protein OM953_12515 PF07196 Flagellin hook IN motif OM953_12515 PF06429 Flagellar basal body rod FlgEFG protein C-terminal OM953_12520 PF00669 Bacterial flagellin N-terminal helical region OM953_12520 PF00700 Bacterial flagellin C-terminal helical region OM953_12525 PF00700 Bacterial flagellin C-terminal helical region OM953_12525 PF00669 Bacterial flagellin N-terminal helical region OM953_12535 PF07196 Flagellin hook IN motif OM953_12535 PF07195 Flagellar hook-associated protein 2 C-terminus OM953_12535 PF02465 Flagellar hook-associated protein 2 N-terminus OM953_12540 PF02561 Flagellar protein FliS OM953_12555 PF00196 Bacterial regulatory proteins, luxR family OM953_12555 PF00072 Response regulator receiver domain OM953_12560 PF04552 Sigma-54, DNA binding domain OM953_12560 PF00309 Sigma-54 factor, Activator interacting domain (AID) OM953_12560 PF04963 Sigma-54 factor, core binding domain OM953_12565 PF00072 Response regulator receiver domain OM953_12565 PF01339 CheB methylesterase OM953_12570 PF06490 Flagellar regulatory protein FleQ OM953_12570 PF02954 Bacterial regulatory protein, Fis family OM953_12570 PF00158 Sigma-54 interaction domain OM953_12575 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family OM953_12585 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III OM953_12585 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal OM953_12620 PF04230 Polysaccharide pyruvyl transferase OM953_12625 PF00535 Glycosyl transferase family 2 OM953_12625 PF00534 Glycosyl transferases group 1 OM953_12630 PF02049 Flagellar hook-basal body complex protein FliE OM953_12635 PF01514 Secretory protein of YscJ/FliF family OM953_12635 PF08345 Flagellar M-ring protein C-terminal OM953_12640 PF14841 FliG middle domain OM953_12640 PF14842 FliG N-terminal domain OM953_12640 PF01706 FliG C-terminal domain OM953_12650 PF18269 T3SS EscN ATPase C-terminal domain OM953_12650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain OM953_12670 PF02154 Flagellar motor switch protein FliM OM953_12670 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term OM953_12675 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term OM953_12680 PF04347 Flagellar biosynthesis protein, FliO OM953_12685 PF00813 FliP family OM953_12690 PF01313 Bacterial export proteins, family 3 OM953_12695 PF01311 Bacterial export proteins, family 1 OM953_12705 PF00990 Diguanylate cyclase, GGDEF domain OM953_12710 PF00563 EAL domain OM953_12710 PF00990 Diguanylate cyclase, GGDEF domain OM953_12710 PF03707 Bacterial signalling protein N terminal repeat OM953_12715 PF01312 FlhB HrpN YscU SpaS Family OM953_12720 PF00771 FHIPEP family OM953_12725 PF00448 SRP54-type protein, GTPase domain OM953_12730 PF10609 NUBPL iron-transfer P-loop NTPase OM953_12735 PF04542 Sigma-70 region 2 OM953_12735 PF04539 Sigma-70 region 3 OM953_12735 PF04545 Sigma-70, region 4 OM953_12740 PF00072 Response regulator receiver domain OM953_12745 PF04344 Chemotaxis phosphatase, CheZ OM953_12750 PF02895 Signal transducing histidine kinase, homodimeric domain OM953_12750 PF01584 CheW-like domain OM953_12750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_12750 PF01627 Hpt domain OM953_12750 PF00072 Response regulator receiver domain OM953_12825 PF13614 AAA domain OM953_12840 PF01618 MotA/TolQ/ExbB proton channel family OM953_12845 PF13677 Membrane MotB of proton-channel complex MotA/MotB OM953_12845 PF00691 OmpA family OM953_12850 PF13614 AAA domain OM953_12855 PF01584 CheW-like domain OM953_12865 PF00072 Response regulator receiver domain OM953_12870 PF01584 CheW-like domain OM953_12870 PF09078 CheY binding OM953_12870 PF02895 Signal transducing histidine kinase, homodimeric domain OM953_12870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_12870 PF01627 Hpt domain OM953_12875 PF00672 HAMP domain OM953_12875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM953_12885 PF08269 Cache domain OM953_12885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM953_12890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM953_12890 PF02203 Tar ligand binding domain homologue OM953_12890 PF00672 HAMP domain OM953_12900 PF00672 HAMP domain OM953_12900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM953_12900 PF02203 Tar ligand binding domain homologue OM953_12905 PF02203 Tar ligand binding domain homologue OM953_12905 PF00672 HAMP domain OM953_12905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM953_12910 PF00672 HAMP domain OM953_12910 PF02203 Tar ligand binding domain homologue OM953_12910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM953_12915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM953_12915 PF02203 Tar ligand binding domain homologue OM953_12915 PF00672 HAMP domain OM953_12925 PF00672 HAMP domain OM953_12925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM953_12925 PF02203 Tar ligand binding domain homologue OM953_12930 PF02203 Tar ligand binding domain homologue OM953_12930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM953_12930 PF00672 HAMP domain OM953_12935 PF02203 Tar ligand binding domain homologue OM953_12935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM953_12935 PF00672 HAMP domain OM953_12940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM953_12940 PF02203 Tar ligand binding domain homologue OM953_12940 PF00672 HAMP domain OM953_12955 PF07238 PilZ domain OM953_12955 PF07317 Flagellar regulator YcgR OM953_12960 PF01584 CheW-like domain OM953_12975 PF00672 HAMP domain OM953_12975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM953_12975 PF02203 Tar ligand binding domain homologue OM953_12980 PF03705 CheR methyltransferase, all-alpha domain OM953_12980 PF01739 CheR methyltransferase, SAM binding domain OM953_12985 PF03975 CheD chemotactic sensory transduction OM953_12990 PF01339 CheB methylesterase OM953_12990 PF00072 Response regulator receiver domain OM953_12995 PF03707 Bacterial signalling protein N terminal repeat OM953_12995 PF00990 Diguanylate cyclase, GGDEF domain OM953_12995 PF00563 EAL domain OM953_13000 PF00561 alpha/beta hydrolase fold OM953_13005 PF00330 Aconitase family (aconitate hydratase) OM953_13005 PF06434 Aconitate hydratase 2 N-terminus OM953_13005 PF11791 Aconitate B N-terminal domain OM953_13020 PF00330 Aconitase family (aconitate hydratase) OM953_13020 PF00694 Aconitase C-terminal domain OM953_13030 PF13193 AMP-binding enzyme C-terminal domain OM953_13030 PF00501 AMP-binding enzyme OM953_13035 PF00378 Enoyl-CoA hydratase/isomerase OM953_13040 PF00072 Response regulator receiver domain OM953_13040 PF01627 Hpt domain OM953_13040 PF00512 His Kinase A (phospho-acceptor) domain OM953_13040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_13045 PF00072 Response regulator receiver domain OM953_13045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_13045 PF00512 His Kinase A (phospho-acceptor) domain OM953_13045 PF01627 Hpt domain OM953_13050 PF00072 Response regulator receiver domain OM953_13055 PF00152 tRNA synthetases class II (D, K and N) OM953_13055 PF01336 OB-fold nucleic acid binding domain OM953_13065 PF04397 LytTr DNA-binding domain OM953_13065 PF00072 Response regulator receiver domain OM953_13075 PF17768 RecJ OB domain OM953_13075 PF01368 DHH family OM953_13075 PF02272 DHHA1 domain OM953_13085 PF03449 Transcription elongation factor, N-terminal OM953_13085 PF01272 Transcription elongation factor, GreA/GreB, C-term OM953_13090 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain OM953_13090 PF02142 MGS-like domain OM953_13090 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain OM953_13100 PF00117 Glutamine amidotransferase class-I OM953_13100 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain OM953_13105 PF01113 Dihydrodipicolinate reductase, N-terminus OM953_13105 PF05173 Dihydrodipicolinate reductase, C-terminus OM953_13115 PF00155 Aminotransferase class I and II OM953_13130 PF07664 Ferrous iron transport protein B C terminus OM953_13130 PF07670 Nucleoside recognition OM953_13130 PF02421 Ferrous iron transport protein B OM953_13140 PF00378 Enoyl-CoA hydratase/isomerase OM953_13150 PF00682 HMGL-like OM953_13155 PF00106 short chain dehydrogenase OM953_13160 PF09285 Elongation factor P, C-terminal OM953_13160 PF01132 Elongation factor P (EF-P) OB domain OM953_13160 PF08207 Elongation factor P (EF-P) KOW-like domain OM953_13180 PF02913 FAD linked oxidases, C-terminal domain OM953_13180 PF01565 FAD binding domain OM953_13185 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain OM953_13185 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain OM953_13195 PF13520 Amino acid permease OM953_13200 PF13520 Amino acid permease OM953_13205 PF00596 Class II Aldolase and Adducin N-terminal domain OM953_13210 PF03079 ARD/ARD' family OM953_13230 PF01502 Phosphoribosyl-AMP cyclohydrolase OM953_13230 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase OM953_13235 PF00977 Histidine biosynthesis protein OM953_13240 PF00977 Histidine biosynthesis protein OM953_13245 PF00117 Glutamine amidotransferase class-I OM953_13250 PF00475 Imidazoleglycerol-phosphate dehydratase OM953_13255 PF00155 Aminotransferase class I and II OM953_13260 PF00815 Histidinol dehydrogenase OM953_13265 PF01634 ATP phosphoribosyltransferase OM953_13265 PF08029 HisG, C-terminal domain OM953_13275 PF13393 Histidyl-tRNA synthetase OM953_13275 PF03129 Anticodon binding domain OM953_13280 PF00027 Cyclic nucleotide-binding domain OM953_13280 PF13545 Crp-like helix-turn-helix domain OM953_13290 PF00291 Pyridoxal-phosphate dependent enzyme OM953_13290 PF14821 Threonine synthase N terminus OM953_13300 PF08544 GHMP kinases C terminal OM953_13300 PF00288 GHMP kinases N terminal domain OM953_13305 PF01842 ACT domain OM953_13305 PF00742 Homoserine dehydrogenase OM953_13305 PF13840 ACT domain OM953_13305 PF03447 Homoserine dehydrogenase, NAD binding domain OM953_13305 PF00696 Amino acid kinase family OM953_13330 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain OM953_13330 PF05860 haemagglutination activity domain OM953_13330 PF13332 Hemagglutinin repeat OM953_13330 PF05594 Haemagluttinin repeat OM953_13330 PF13018 Extended Signal Peptide of Type V secretion system OM953_13345 PF01522 Polysaccharide deacetylase OM953_13345 PF14883 Hypothetical glycosyl hydrolase family 13 OM953_13350 PF00535 Glycosyl transferase family 2 OM953_13390 PF00171 Aldehyde dehydrogenase family OM953_13410 PF01180 Dihydroorotate dehydrogenase OM953_13415 PF01565 FAD binding domain OM953_13415 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain OM953_13420 PF00892 EamA-like transporter family OM953_13425 PF01177 Asp/Glu/Hydantoin racemase OM953_13430 PF07690 Major Facilitator Superfamily OM953_13440 PF01569 PAP2 superfamily OM953_13445 PF04551 GcpE protein OM953_13455 PF00072 Response regulator receiver domain OM953_13460 PF00150 Cellulase (glycosyl hydrolase family 5) OM953_13460 PF02013 Cellulose or protein binding domain OM953_13465 PF00563 EAL domain OM953_13465 PF01590 GAF domain OM953_13465 PF00990 Diguanylate cyclase, GGDEF domain OM953_13465 PF00360 Phytochrome region OM953_13470 PF00474 Sodium:solute symporter family OM953_13475 PF01915 Glycosyl hydrolase family 3 C-terminal domain OM953_13475 PF14310 Fibronectin type III-like domain OM953_13475 PF00933 Glycosyl hydrolase family 3 N terminal domain OM953_13495 PF00342 Phosphoglucose isomerase OM953_13500 PF02261 Aspartate decarboxylase OM953_13505 PF02569 Pantoate-beta-alanine ligase OM953_13510 PF02548 Ketopantoate hydroxymethyltransferase OM953_13515 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) OM953_13520 PF01743 Poly A polymerase head domain OM953_13520 PF12626 Polymerase A arginine-rich C-terminus OM953_13520 PF12627 Probable RNA and SrmB- binding site of polymerase A OM953_13530 PF02649 Type I GTP cyclohydrolase folE2 OM953_13535 PF01520 N-acetylmuramoyl-L-alanine amidase OM953_13550 PF00083 Sugar (and other) transporter OM953_13560 PF00370 FGGY family of carbohydrate kinases, N-terminal domain OM953_13560 PF02782 FGGY family of carbohydrate kinases, C-terminal domain OM953_13570 PF17137 Domain of unknown function (DUF5110) OM953_13570 PF01055 Glycosyl hydrolases family 31 OM953_13570 PF16338 Domain of unknown function (DUF4968) OM953_13575 PF02449 Beta-galactosidase OM953_13575 PF08532 Beta-galactosidase trimerisation domain OM953_13575 PF08533 Beta-galactosidase C-terminal domain OM953_13585 PF03442 Carbohydrate binding domain X2 OM953_13585 PF00942 Cellulose binding domain OM953_13600 PF03466 LysR substrate binding domain OM953_13600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM953_13605 PF01081 KDPG and KHG aldolase OM953_13610 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain OM953_13610 PF13378 Enolase C-terminal domain-like OM953_13615 PF08450 SMP-30/Gluconolactonase/LRE-like region OM953_13620 PF05035 2-keto-3-deoxy-galactonokinase OM953_13625 PF00037 4Fe-4S binding domain OM953_13625 PF11953 Domain of unknown function (DUF3470) OM953_13635 PF00701 Dihydrodipicolinate synthetase family OM953_13650 PF00578 AhpC/TSA family OM953_13655 PF02562 PhoH-like protein OM953_13655 PF13638 PIN domain OM953_13670 PF08543 Phosphomethylpyrimidine kinase OM953_13695 PF03466 LysR substrate binding domain OM953_13695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM953_13700 PF17954 Quercetinase C-terminal cupin domain OM953_13700 PF02678 Pirin OM953_13705 PF13426 PAS domain OM953_13705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM953_13705 PF08447 PAS fold OM953_13720 PF02599 Global regulator protein family OM953_13725 PF02272 DHHA1 domain OM953_13725 PF01411 tRNA synthetases class II (A) OM953_13725 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain OM953_13730 PF02631 RecX family OM953_13735 PF00154 recA bacterial DNA recombination protein OM953_13740 PF01726 LexA DNA binding domain OM953_13740 PF00717 Peptidase S24-like OM953_13745 PF03109 ABC1 family OM953_13750 PF02464 Competence-damaged protein OM953_13755 PF13167 GTP-binding GTPase N-terminal OM953_13755 PF16360 GTP-binding GTPase Middle Region OM953_13755 PF01926 50S ribosome-binding GTPase OM953_13760 PF17209 Hfq protein OM953_13770 PF00809 Pterin binding enzyme OM953_13775 PF00004 ATPase family associated with various cellular activities (AAA) OM953_13775 PF17862 AAA+ lid domain OM953_13775 PF06480 FtsH Extracellular OM953_13775 PF01434 Peptidase family M41 OM953_13780 PF01728 FtsJ-like methyltransferase OM953_13785 PF01985 CRS1 / YhbY (CRM) domain OM953_13790 PF04430 Protein of unknown function (DUF498/DUF598) OM953_13795 PF01476 LysM domain OM953_13795 PF01551 Peptidase family M23 OM953_13800 PF09335 SNARE associated Golgi protein OM953_13810 PF01975 Survival protein SurE OM953_13815 PF01713 Smr domain OM953_13820 PF01142 tRNA pseudouridine synthase D (TruD) OM953_13825 PF02542 YgbB family OM953_13830 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OM953_13835 PF04977 Septum formation initiator OM953_13840 PF03952 Enolase, N-terminal domain OM953_13840 PF00113 Enolase, C-terminal TIM barrel domain OM953_13850 PF00793 DAHP synthetase I family OM953_13855 PF00117 Glutamine amidotransferase class-I OM953_13855 PF06418 CTP synthase N-terminus OM953_13865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_13865 PF00204 DNA gyrase B OM953_13865 PF01751 Toprim domain OM953_13865 PF00986 DNA gyrase B subunit, carboxyl terminus OM953_13880 PF01384 Phosphate transporter family OM953_13890 PF00571 CBS domain OM953_13890 PF03471 Transporter associated domain OM953_13890 PF01595 Cyclin M transmembrane N-terminal domain OM953_13905 PF00296 Luciferase-like monooxygenase OM953_13910 PF07690 Major Facilitator Superfamily OM953_13915 PF00664 ABC transporter transmembrane region OM953_13915 PF00005 ABC transporter OM953_13920 PF00005 ABC transporter OM953_13955 PF08241 Methyltransferase domain OM953_13970 PF00872 Transposase, Mutator family OM953_13980 PF00535 Glycosyl transferase family 2 OM953_13985 PF01943 Polysaccharide biosynthesis protein OM953_13990 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family OM953_14010 PF05523 WxcM-like, C-terminal OM953_14025 PF00034 Cytochrome c OM953_14035 PF04542 Sigma-70 region 2 OM953_14035 PF08281 Sigma-70, region 4 OM953_14045 PF00082 Subtilase family OM953_14050 PF01578 Cytochrome C assembly protein OM953_14055 PF04995 Heme exporter protein D (CcmD) OM953_14060 PF03100 CcmE OM953_14065 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal OM953_14065 PF01578 Cytochrome C assembly protein OM953_14070 PF08534 Redoxin OM953_14075 PF03918 Cytochrome C biogenesis protein OM953_14085 PF13426 PAS domain OM953_14085 PF00072 Response regulator receiver domain OM953_14085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_14090 PF06745 KaiC OM953_14095 PF00672 HAMP domain OM953_14095 PF00512 His Kinase A (phospho-acceptor) domain OM953_14095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_14095 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) OM953_14095 PF00072 Response regulator receiver domain OM953_14095 PF01627 Hpt domain OM953_14100 PF00072 Response regulator receiver domain OM953_14100 PF13188 PAS domain OM953_14100 PF08448 PAS fold OM953_14100 PF00512 His Kinase A (phospho-acceptor) domain OM953_14100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_14110 PF01494 FAD binding domain OM953_14115 PF02203 Tar ligand binding domain homologue OM953_14115 PF00672 HAMP domain OM953_14115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM953_14130 PF03466 LysR substrate binding domain OM953_14130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM953_14135 PF02525 Flavodoxin-like fold OM953_14140 PF02403 Seryl-tRNA synthetase N-terminal domain OM953_14140 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) OM953_14145 PF03544 Gram-negative bacterial TonB protein C-terminal OM953_14155 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) OM953_14160 PF01842 ACT domain OM953_14160 PF01817 Chorismate mutase type II OM953_14160 PF00800 Prephenate dehydratase OM953_14170 PF00174 Oxidoreductase molybdopterin binding domain OM953_14175 PF01794 Ferric reductase like transmembrane component OM953_14200 PF00392 Bacterial regulatory proteins, gntR family OM953_14200 PF07702 UTRA domain OM953_14210 PF07969 Amidohydrolase family OM953_14215 PF00221 Aromatic amino acid lyase OM953_14225 PF17391 Urocanase N-terminal domain OM953_14225 PF17392 Urocanase C-terminal domain OM953_14225 PF01175 Urocanase Rossmann-like domain OM953_14235 PF13360 PQQ-like domain OM953_14240 PF03989 DNA gyrase C-terminal domain, beta-propeller OM953_14240 PF00521 DNA gyrase/topoisomerase IV, subunit A OM953_14245 PF01008 Initiation factor 2 subunit family OM953_14260 PF00152 tRNA synthetases class II (D, K and N) OM953_14265 PF00533 BRCA1 C Terminus (BRCT) domain OM953_14265 PF01653 NAD-dependent DNA ligase adenylation domain OM953_14265 PF03120 NAD-dependent DNA ligase OB-fold domain OM953_14265 PF03119 NAD-dependent DNA ligase C4 zinc finger domain OM953_14265 PF12826 Helix-hairpin-helix motif OM953_14270 PF00155 Aminotransferase class I and II OM953_14280 PF04354 ZipA, C-terminal FtsZ-binding domain OM953_14285 PF02463 RecF/RecN/SMC N terminal domain OM953_14295 PF03948 Ribosomal protein L9, C-terminal domain OM953_14295 PF01281 Ribosomal protein L9, N-terminal domain OM953_14300 PF01084 Ribosomal protein S18 OM953_14305 PF01250 Ribosomal protein S6 OM953_14310 PF01521 Iron-sulphur cluster biosynthesis OM953_14315 PF00152 tRNA synthetases class II (D, K and N) OM953_14315 PF01336 OB-fold nucleic acid binding domain OM953_14350 PF00196 Bacterial regulatory proteins, luxR family OM953_14350 PF00072 Response regulator receiver domain OM953_14395 PF00484 Carbonic anhydrase OM953_14400 PF06052 3-hydroxyanthranilic acid dioxygenase OM953_14410 PF00266 Aminotransferase class-V OM953_14415 PF01494 FAD binding domain OM953_14420 PF08411 Exonuclease C-terminal OM953_14420 PF00929 Exonuclease OM953_14445 PF01513 ATP-NAD kinase OM953_14490 PF00581 Rhodanese-like domain OM953_14495 PF00293 NUDIX domain OM953_14500 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase OM953_14500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase OM953_14505 PF00378 Enoyl-CoA hydratase/isomerase OM953_14515 PF10576 Iron-sulfur binding domain of endonuclease III OM953_14515 PF00633 Helix-hairpin-helix motif OM953_14515 PF00730 HhH-GPD superfamily base excision DNA repair protein OM953_14520 PF01740 STAS domain OM953_14520 PF00916 Sulfate permease family OM953_14525 PF00484 Carbonic anhydrase OM953_14540 PF12849 PBP superfamily domain OM953_14545 PF12849 PBP superfamily domain OM953_14550 PF00528 Binding-protein-dependent transport system inner membrane component OM953_14555 PF00528 Binding-protein-dependent transport system inner membrane component OM953_14560 PF00005 ABC transporter OM953_14565 PF01895 PhoU domain OM953_14575 PF00929 Exonuclease OM953_14580 PF00990 Diguanylate cyclase, GGDEF domain OM953_14585 PF00588 SpoU rRNA Methylase family OM953_14585 PF08032 RNA 2'-O ribose methyltransferase substrate binding OM953_14595 PF00575 S1 RNA binding domain OM953_14595 PF17876 Cold shock domain OM953_14595 PF08461 Ribonuclease R winged-helix domain OM953_14595 PF08206 Ribonuclease B OB domain OM953_14595 PF00773 RNB domain OM953_14610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OM953_14610 PF02770 Acyl-CoA dehydrogenase, middle domain OM953_14610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OM953_14615 PF01209 ubiE/COQ5 methyltransferase family OM953_14620 PF02574 Homocysteine S-methyltransferase OM953_14620 PF00809 Pterin binding enzyme OM953_14625 PF02310 B12 binding domain OM953_14625 PF02607 B12 binding domain OM953_14625 PF02965 Vitamin B12 dependent methionine synthase, activation domain OM953_14625 PF02574 Homocysteine S-methyltransferase OM953_14625 PF00809 Pterin binding enzyme OM953_14635 PF00294 pfkB family carbohydrate kinase OM953_14640 PF07690 Major Facilitator Superfamily OM953_14645 PF00356 Bacterial regulatory proteins, lacI family OM953_14660 PF04102 SlyX OM953_14665 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain OM953_14665 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain OM953_14665 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain OM953_14670 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase OM953_14670 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase OM953_14675 PF00255 Glutathione peroxidase OM953_14685 PF00392 Bacterial regulatory proteins, gntR family OM953_14690 PF00005 ABC transporter OM953_14715 PF10415 Fumarase C C-terminus OM953_14715 PF00206 Lyase OM953_14720 PF00571 CBS domain OM953_14720 PF03471 Transporter associated domain OM953_14720 PF01595 Cyclin M transmembrane N-terminal domain OM953_14730 PF08328 Adenylosuccinate lyase C-terminal OM953_14730 PF00206 Lyase OM953_14740 PF08007 Cupin superfamily protein OM953_14750 PF02779 Transketolase, pyrimidine binding domain OM953_14750 PF16870 2-oxoglutarate dehydrogenase C-terminal OM953_14750 PF16078 2-oxoglutarate dehydrogenase N-terminus OM953_14750 PF00676 Dehydrogenase E1 component OM953_14755 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) OM953_14755 PF00364 Biotin-requiring enzyme OM953_14755 PF02817 e3 binding domain OM953_14760 PF07992 Pyridine nucleotide-disulphide oxidoreductase OM953_14760 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain OM953_14765 PF03641 Possible lysine decarboxylase OM953_14770 PF01205 Uncharacterized protein family UPF0029 OM953_14775 PF00664 ABC transporter transmembrane region OM953_14775 PF00005 ABC transporter OM953_14780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM953_14780 PF03466 LysR substrate binding domain OM953_14785 PF00005 ABC transporter OM953_14785 PF03412 Peptidase C39 family OM953_14785 PF00664 ABC transporter transmembrane region OM953_14810 PF08543 Phosphomethylpyrimidine kinase OM953_14815 PF00684 DnaJ central domain OM953_14815 PF01556 DnaJ C terminal domain OM953_14815 PF00226 DnaJ domain OM953_14820 PF00012 Hsp70 protein OM953_14825 PF01025 GrpE OM953_14830 PF01628 HrcA protein C terminal domain OM953_14830 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding OM953_14835 PF02463 RecF/RecN/SMC N terminal domain OM953_14840 PF01475 Ferric uptake regulator family OM953_14845 PF04355 SmpA / OmlA family OM953_14850 PF03658 RnfH family Ubiquitin OM953_14855 PF03364 Polyketide cyclase / dehydrase and lipid transport OM953_14860 PF01668 SmpB protein OM953_14865 PF00082 Subtilase family OM953_14920 PF02534 Type IV secretory system Conjugative DNA transfer OM953_14950 PF00872 Transposase, Mutator family OM953_15055 PF00990 Diguanylate cyclase, GGDEF domain OM953_15065 PF00990 Diguanylate cyclase, GGDEF domain OM953_15070 PF02321 Outer membrane efflux protein OM953_15075 PF00106 short chain dehydrogenase OM953_15080 PF00873 AcrB/AcrD/AcrF family OM953_15085 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OM953_15100 PF03466 LysR substrate binding domain OM953_15100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM953_15105 PF00691 OmpA family OM953_15105 PF05736 OprF membrane domain OM953_15110 PF00875 DNA photolyase OM953_15110 PF03441 FAD binding domain of DNA photolyase OM953_15115 PF00772 DnaB-like helicase N terminal domain OM953_15115 PF03796 DnaB-like helicase C terminal domain OM953_15120 PF03358 NADPH-dependent FMN reductase OM953_15125 PF00733 Asparagine synthase OM953_15125 PF13537 Glutamine amidotransferase domain OM953_15135 PF00043 Glutathione S-transferase, C-terminal domain OM953_15135 PF02798 Glutathione S-transferase, N-terminal domain OM953_15145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OM953_15145 PF02770 Acyl-CoA dehydrogenase, middle domain OM953_15145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OM953_15160 PF01026 TatD related DNase OM953_15165 PF00899 ThiF family OM953_15180 PF00313 'Cold-shock' DNA-binding domain OM953_15190 PF02253 Phospholipase A1 OM953_15195 PF00484 Carbonic anhydrase OM953_15205 PF05681 Fumarate hydratase (Fumerase) OM953_15205 PF05683 Fumarase C-terminus OM953_15210 PF00005 ABC transporter OM953_15215 PF00970 Oxidoreductase FAD-binding domain OM953_15215 PF00175 Oxidoreductase NAD-binding domain OM953_15220 PF00255 Glutathione peroxidase OM953_15225 PF01432 Peptidase family M3 OM953_15230 PF12802 MarR family OM953_15255 PF00854 POT family OM953_15265 PF14310 Fibronectin type III-like domain OM953_15265 PF00933 Glycosyl hydrolase family 3 N terminal domain OM953_15265 PF01915 Glycosyl hydrolase family 3 C-terminal domain OM953_15275 PF07690 Major Facilitator Superfamily OM953_15280 PF00529 HlyD membrane-fusion protein of T1SS OM953_15280 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OM953_15285 PF02321 Outer membrane efflux protein OM953_15300 PF00521 DNA gyrase/topoisomerase IV, subunit A OM953_15300 PF03989 DNA gyrase C-terminal domain, beta-propeller OM953_15310 PF05724 Thiopurine S-methyltransferase (TPMT) OM953_15315 PF00210 Ferritin-like domain OM953_15320 PF01804 Penicillin amidase OM953_15350 PF02914 Bacteriophage Mu transposase OM953_15350 PF02316 Mu DNA-binding domain OM953_15350 PF09039 Mu DNA binding, I gamma subdomain OM953_15350 PF09299 Mu transposase, C-terminal OM953_15355 PF13401 AAA domain OM953_15355 PF09077 Mu B transposition protein, C terminal OM953_15420 PF08765 Mor transcription activator family OM953_15445 PF01258 Prokaryotic dksA/traR C4-type zinc finger OM953_15465 PF03237 Terminase-like family OM953_15470 PF06074 Protein of unknown function (DUF935) OM953_15475 PF04233 Phage Mu protein F like protein OM953_15495 PF10124 Mu-like prophage major head subunit gpT OM953_15580 PF00593 TonB dependent receptor OM953_15580 PF07715 TonB-dependent Receptor Plug Domain OM953_15590 PF00733 Asparagine synthase OM953_15590 PF13537 Glutamine amidotransferase domain OM953_15595 PF01546 Peptidase family M20/M25/M40 OM953_15595 PF07687 Peptidase dimerisation domain OM953_15600 PF03960 ArsC family OM953_15605 PF14602 Hexapeptide repeat of succinyl-transferase OM953_15605 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal OM953_15605 PF00132 Bacterial transferase hexapeptide (six repeats) OM953_15615 PF00557 Metallopeptidase family M24 OM953_15650 PF00318 Ribosomal protein S2 OM953_15655 PF00889 Elongation factor TS OM953_15660 PF00072 Response regulator receiver domain OM953_15660 PF00990 Diguanylate cyclase, GGDEF domain OM953_15665 PF00696 Amino acid kinase family OM953_15670 PF01765 Ribosome recycling factor OM953_15675 PF01255 Putative undecaprenyl diphosphate synthase OM953_15685 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain OM953_15685 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase OM953_15685 PF13288 DXP reductoisomerase C-terminal domain OM953_15690 PF17820 PDZ domain OM953_15690 PF02163 Peptidase family M50 OM953_15695 PF01103 Surface antigen OM953_15695 PF07244 Surface antigen variable number repeat OM953_15705 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD OM953_15705 PF00132 Bacterial transferase hexapeptide (six repeats) OM953_15710 PF07977 FabA-like domain OM953_15715 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 OM953_15715 PF00132 Bacterial transferase hexapeptide (six repeats) OM953_15720 PF02684 Lipid-A-disaccharide synthetase OM953_15725 PF01351 Ribonuclease HII OM953_15730 PF07733 Bacterial DNA polymerase III alpha NTPase domain OM953_15730 PF17657 Bacterial DNA polymerase III alpha subunit finger domain OM953_15730 PF14579 Helix-hairpin-helix motif OM953_15730 PF02811 PHP domain OM953_15730 PF01336 OB-fold nucleic acid binding domain OM953_15735 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit OM953_15750 PF03653 Uncharacterised protein family (UPF0093) OM953_15770 PF03551 Transcriptional regulator PadR-like family OM953_15790 PF02592 Putative vitamin uptake transporter OM953_15800 PF02574 Homocysteine S-methyltransferase OM953_15805 PF00324 Amino acid permease OM953_15810 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily OM953_15815 PF13732 Domain of unknown function (DUF4162) OM953_15815 PF00005 ABC transporter OM953_15830 PF01588 Putative tRNA binding domain OM953_15830 PF09334 tRNA synthetases class I (M) OM953_15840 PF04060 Putative Fe-S cluster OM953_15855 PF04542 Sigma-70 region 2 OM953_15855 PF04545 Sigma-70, region 4 OM953_15900 PF01042 Endoribonuclease L-PSP OM953_15910 PF09924 Uncharacterised conserved protein (DUF2156) OM953_15910 PF03706 Lysylphosphatidylglycerol synthase TM region OM953_15945 PF07690 Major Facilitator Superfamily OM953_15950 PF00724 NADH:flavin oxidoreductase / NADH oxidase family OM953_15955 PF03831 PhnA domain OM953_15955 PF08274 PhnA Zinc-Ribbon OM953_15965 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase OM953_15975 PF01810 LysE type translocator OM953_15980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM953_15980 PF03466 LysR substrate binding domain OM953_15990 PF07536 HWE histidine kinase OM953_15990 PF13581 Histidine kinase-like ATPase domain OM953_15990 PF13426 PAS domain OM953_15995 PF06508 Queuosine biosynthesis protein QueC OM953_16005 PF04055 Radical SAM superfamily OM953_16015 PF00691 OmpA family OM953_16020 PF07676 WD40-like Beta Propeller Repeat OM953_16020 PF04052 TolB amino-terminal domain OM953_16030 PF02472 Biopolymer transport protein ExbD/TolR OM953_16035 PF01618 MotA/TolQ/ExbB proton channel family OM953_16040 PF03061 Thioesterase superfamily OM953_16045 PF05496 Holliday junction DNA helicase RuvB P-loop domain OM953_16045 PF05491 RuvB C-terminal winged helix domain OM953_16045 PF17864 RuvB AAA lid domain OM953_16050 PF02705 K+ potassium transporter OM953_16055 PF07499 RuvA, C-terminal domain OM953_16055 PF01330 RuvA N terminal domain OM953_16060 PF02075 Crossover junction endodeoxyribonuclease RuvC OM953_16065 PF01709 Transcriptional regulator OM953_16080 PF02938 GAD domain OM953_16080 PF00152 tRNA synthetases class II (D, K and N) OM953_16080 PF01336 OB-fold nucleic acid binding domain OM953_16095 PF07690 Major Facilitator Superfamily OM953_16105 PF04185 Phosphoesterase family OM953_16105 PF05506 Domain of unknown function (DUF756) OM953_16125 PF03466 LysR substrate binding domain OM953_16125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM953_16135 PF00005 ABC transporter OM953_16135 PF12848 ABC transporter OM953_16140 PF07715 TonB-dependent Receptor Plug Domain OM953_16140 PF00593 TonB dependent receptor OM953_16150 PF07715 TonB-dependent Receptor Plug Domain OM953_16150 PF00593 TonB dependent receptor OM953_16155 PF00593 TonB dependent receptor OM953_16155 PF07715 TonB-dependent Receptor Plug Domain OM953_16160 PF00067 Cytochrome P450 OM953_16165 PF00999 Sodium/hydrogen exchanger family OM953_16165 PF02254 TrkA-N domain OM953_16175 PF07715 TonB-dependent Receptor Plug Domain OM953_16175 PF07660 Secretin and TonB N terminus short domain OM953_16175 PF00593 TonB dependent receptor OM953_16185 PF06276 Ferric iron reductase FhuF-like transporter OM953_16185 PF04183 IucA / IucC family OM953_16190 PF07690 Major Facilitator Superfamily OM953_16195 PF04183 IucA / IucC family OM953_16195 PF06276 Ferric iron reductase FhuF-like transporter OM953_16200 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain OM953_16200 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain OM953_16220 PF02654 Cobalamin-5-phosphate synthase OM953_16230 PF02277 Phosphoribosyltransferase OM953_16235 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase OM953_16245 PF00155 Aminotransferase class I and II OM953_16250 PF17113 Regulatory signalling modulator protein AmpE OM953_16250 PF03186 CobD/Cbib protein OM953_16255 PF12557 Cob(I)alamin adenosyltransferase N terminal OM953_16255 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP OM953_16275 PF00593 TonB dependent receptor OM953_16275 PF07715 TonB-dependent Receptor Plug Domain OM953_16280 PF07724 AAA domain (Cdc48 subfamily) OM953_16280 PF00004 ATPase family associated with various cellular activities (AAA) OM953_16280 PF17871 AAA lid domain OM953_16280 PF10431 C-terminal, D2-small domain, of ClpB protein OM953_16280 PF02861 Clp amino terminal domain, pathogenicity island component OM953_16285 PF00005 ABC transporter OM953_16290 PF00528 Binding-protein-dependent transport system inner membrane component OM953_16295 PF09084 NMT1/THI5 like OM953_16300 PF00248 Aldo/keto reductase family OM953_16305 PF00296 Luciferase-like monooxygenase OM953_16310 PF07715 TonB-dependent Receptor Plug Domain OM953_16310 PF00593 TonB dependent receptor OM953_16315 PF01541 GIY-YIG catalytic domain OM953_16350 PF00593 TonB dependent receptor OM953_16350 PF07715 TonB-dependent Receptor Plug Domain OM953_16355 PF02358 Trehalose-phosphatase OM953_16360 PF00723 Glycosyl hydrolases family 15 OM953_16365 PF00982 Glycosyltransferase family 20 OM953_16370 PF01011 PQQ enzyme repeat OM953_16375 PF00672 HAMP domain OM953_16375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM953_16375 PF02203 Tar ligand binding domain homologue OM953_16380 PF04134 Protein of unknown function, DUF393 OM953_16390 PF02578 Multi-copper polyphenol oxidoreductase laccase OM953_16395 PF00849 RNA pseudouridylate synthase OM953_16400 PF13525 Outer membrane lipoprotein OM953_16410 PF00795 Carbon-nitrogen hydrolase OM953_16410 PF02540 NAD synthase OM953_16425 PF02629 CoA binding domain OM953_16425 PF00549 CoA-ligase OM953_16430 PF08442 ATP-grasp domain OM953_16430 PF00549 CoA-ligase OM953_16435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_16435 PF00512 His Kinase A (phospho-acceptor) domain OM953_16445 PF00437 Type II/IV secretion system protein OM953_16445 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain OM953_16465 PF00482 Type II secretion system (T2SS), protein F OM953_16470 PF06750 Bacterial Peptidase A24 N-terminal domain OM953_16470 PF01478 Type IV leader peptidase family OM953_16475 PF01121 Dephospho-CoA kinase OM953_16500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_16500 PF11808 Phosphate regulon sensor protein PhoR OM953_16500 PF00512 His Kinase A (phospho-acceptor) domain OM953_16500 PF00989 PAS fold OM953_16505 PF00486 Transcriptional regulatory protein, C terminal OM953_16505 PF00072 Response regulator receiver domain OM953_16515 PF18030 RimK PreATP-grasp domain OM953_16515 PF08443 RimK-like ATP-grasp domain OM953_16520 PF00128 Alpha amylase, catalytic domain OM953_16520 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) OM953_16550 PF00657 GDSL-like Lipase/Acylhydrolase OM953_16550 PF03797 Autotransporter beta-domain OM953_16560 PF05690 Thiazole biosynthesis protein ThiG OM953_16565 PF02390 Putative methyltransferase OM953_16570 PF03600 Citrate transporter OM953_16570 PF02080 TrkA-C domain OM953_16585 PF01557 Fumarylacetoacetate (FAA) hydrolase family OM953_16590 PF01741 Large-conductance mechanosensitive channel, MscL OM953_16600 PF00356 Bacterial regulatory proteins, lacI family OM953_16610 PF00703 Glycosyl hydrolases family 2 OM953_16610 PF02837 Glycosyl hydrolases family 2, sugar binding domain OM953_16610 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain OM953_16615 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation OM953_16615 PF14508 Glycosyl-hydrolase 97 N-terminal OM953_16615 PF10566 Glycoside hydrolase 97 OM953_16620 PF00135 Carboxylesterase family OM953_16625 PF00588 SpoU rRNA Methylase family OM953_16625 PF08032 RNA 2'-O ribose methyltransferase substrate binding OM953_16635 PF01433 Peptidase family M1 domain OM953_16635 PF11838 ERAP1-like C-terminal domain OM953_16640 PF00873 AcrB/AcrD/AcrF family OM953_16645 PF00529 HlyD membrane-fusion protein of T1SS OM953_16645 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OM953_16650 PF00009 Elongation factor Tu GTP binding domain OM953_16655 PF01507 Phosphoadenosine phosphosulfate reductase family OM953_16660 PF00175 Oxidoreductase NAD-binding domain OM953_16660 PF00258 Flavodoxin OM953_16660 PF00667 FAD binding domain OM953_16665 PF01077 Nitrite and sulphite reductase 4Fe-4S domain OM953_16665 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain OM953_16670 PF01507 Phosphoadenosine phosphosulfate reductase family OM953_16690 PF01627 Hpt domain OM953_16690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_16690 PF00512 His Kinase A (phospho-acceptor) domain OM953_16690 PF00072 Response regulator receiver domain OM953_16700 PF03466 LysR substrate binding domain OM953_16700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM953_16705 PF14824 Sirohaem biosynthesis protein central OM953_16705 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases OM953_16705 PF10414 Sirohaem synthase dimerisation region OM953_16710 PF00291 Pyridoxal-phosphate dependent enzyme OM953_16720 PF01661 Macro domain OM953_16725 PF00274 Fructose-bisphosphate aldolase class-I OM953_16730 PF00224 Pyruvate kinase, barrel domain OM953_16730 PF02887 Pyruvate kinase, alpha/beta domain OM953_16735 PF13419 Haloacid dehalogenase-like hydrolase OM953_16740 PF00162 Phosphoglycerate kinase OM953_16760 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain OM953_16760 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain OM953_16770 PF03922 OmpW family OM953_16775 PF03922 OmpW family OM953_16785 PF04273 Putative phosphatase (DUF442) OM953_16785 PF00753 Metallo-beta-lactamase superfamily OM953_16795 PF00528 Binding-protein-dependent transport system inner membrane component OM953_16800 PF03459 TOBE domain OM953_16800 PF00005 ABC transporter OM953_16835 PF01476 LysM domain OM953_16835 PF03734 L,D-transpeptidase catalytic domain OM953_16840 PF01551 Peptidase family M23 OM953_16840 PF04225 Opacity-associated protein A LysM-like domain OM953_16845 PF00593 TonB dependent receptor OM953_16845 PF07715 TonB-dependent Receptor Plug Domain OM953_16855 PF02779 Transketolase, pyrimidine binding domain OM953_16855 PF02780 Transketolase, C-terminal domain OM953_16855 PF00456 Transketolase, thiamine diphosphate binding domain OM953_16860 PF00375 Sodium:dicarboxylate symporter family OM953_16870 PF00092 von Willebrand factor type A domain OM953_16870 PF07584 Aerotolerance regulator N-terminal OM953_16890 PF07726 ATPase family associated with various cellular activities (AAA) OM953_16890 PF17863 AAA lid domain OM953_16895 PF11741 AMIN domain OM953_16895 PF00263 Bacterial type II and III secretion system protein OM953_16895 PF03958 Bacterial type II/III secretion system short domain OM953_16895 PF07660 Secretin and TonB N terminus short domain OM953_16900 PF04351 Pilus assembly protein, PilP OM953_16905 PF04350 Pilus assembly protein, PilO OM953_16910 PF05137 Fimbrial assembly protein (PilN) OM953_16915 PF11104 Type IV pilus assembly protein PilM; OM953_16920 PF17092 Penicillin-binding protein OB-like domain OM953_16920 PF00912 Transglycosylase OM953_16920 PF00905 Penicillin binding protein transpeptidase domain OM953_16930 PF00285 Citrate synthase, C-terminal domain OM953_16935 PF01197 Ribosomal protein L31 OM953_16940 PF01156 Inosine-uridine preferring nucleoside hydrolase OM953_16945 PF00270 DEAD/DEAH box helicase OM953_16945 PF00271 Helicase conserved C-terminal domain OM953_16945 PF17191 RecG wedge domain OM953_16950 PF01042 Endoribonuclease L-PSP OM953_16955 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus OM953_16955 PF08666 SAF domain OM953_16960 PF03573 outer membrane porin, OprD family OM953_16965 PF13378 Enolase C-terminal domain-like OM953_16965 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain OM953_16970 PF07690 Major Facilitator Superfamily OM953_16975 PF00171 Aldehyde dehydrogenase family OM953_16980 PF00701 Dihydrodipicolinate synthetase family OM953_16985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM953_16985 PF03466 LysR substrate binding domain OM953_16990 PF13291 ACT domain OM953_16990 PF04607 Region found in RelA / SpoT proteins OM953_16990 PF02824 TGS domain OM953_16995 PF01192 RNA polymerase Rpb6 OM953_17000 PF00625 Guanylate kinase OM953_17005 PF08340 Domain of unknown function (DUF1732) OM953_17005 PF03755 YicC-like family, N-terminal region OM953_17010 PF01138 3' exoribonuclease family, domain 1 OM953_17010 PF03725 3' exoribonuclease family, domain 2 OM953_17020 PF01725 Ham1 family OM953_17025 PF06969 HemN C-terminal domain OM953_17025 PF04055 Radical SAM superfamily OM953_17040 PF00557 Metallopeptidase family M24 OM953_17050 PF05195 Aminopeptidase P, N-terminal domain OM953_17050 PF00557 Metallopeptidase family M24 OM953_17055 PF03695 Uncharacterised protein family (UPF0149) OM953_17065 PF05164 Cell division protein ZapA OM953_17075 PF01812 5-formyltetrahydrofolate cyclo-ligase family OM953_17085 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) OM953_17095 PF13369 Transglutaminase-like superfamily OM953_17100 PF00301 Rubredoxin OM953_17105 PF02581 Thiamine monophosphate synthase OM953_17120 PF00202 Aminotransferase class-III OM953_17125 PF00196 Bacterial regulatory proteins, luxR family OM953_17125 PF17874 MalT-like TPR region OM953_17130 PF00127 Copper binding proteins, plastocyanin/azurin family OM953_17135 PF00155 Aminotransferase class I and II OM953_17145 PF00034 Cytochrome c OM953_17145 PF13442 Cytochrome C oxidase, cbb3-type, subunit III OM953_17150 PF01593 Flavin containing amine oxidoreductase OM953_17165 PF00202 Aminotransferase class-III OM953_17170 PF00027 Cyclic nucleotide-binding domain OM953_17170 PF00520 Ion transport protein OM953_17185 PF01569 PAP2 superfamily OM953_17200 PF02875 Mur ligase family, glutamate ligase domain OM953_17200 PF08245 Mur ligase middle domain OM953_17200 PF01225 Mur ligase family, catalytic domain OM953_17210 PF00365 Phosphofructokinase OM953_17220 PF03030 Inorganic H+ pyrophosphatase OM953_17230 PF00719 Inorganic pyrophosphatase OM953_17240 PF07715 TonB-dependent Receptor Plug Domain OM953_17240 PF00593 TonB dependent receptor OM953_17245 PF12833 Helix-turn-helix domain OM953_17250 PF18500 CadC C-terminal domain 1 OM953_17250 PF00486 Transcriptional regulatory protein, C terminal OM953_17255 PF13667 ThiC-associated domain OM953_17255 PF01964 Radical SAM ThiC family OM953_17260 PF00593 TonB dependent receptor OM953_17260 PF07715 TonB-dependent Receptor Plug Domain OM953_17265 PF00672 HAMP domain OM953_17265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM953_17275 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain OM953_17275 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain OM953_17280 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain OM953_17280 PF00205 Thiamine pyrophosphate enzyme, central domain OM953_17280 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain OM953_17290 PF00291 Pyridoxal-phosphate dependent enzyme OM953_17295 PF00682 HMGL-like OM953_17295 PF08502 LeuA allosteric (dimerisation) domain OM953_17300 PF00180 Isocitrate/isopropylmalate dehydrogenase OM953_17305 PF00694 Aconitase C-terminal domain OM953_17310 PF00330 Aconitase family (aconitate hydratase) OM953_17315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM953_17320 PF00990 Diguanylate cyclase, GGDEF domain OM953_17335 PF02321 Outer membrane efflux protein OM953_17340 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) OM953_17345 PF03279 Bacterial lipid A biosynthesis acyltransferase OM953_17370 PF00664 ABC transporter transmembrane region OM953_17370 PF00005 ABC transporter OM953_17370 PF03412 Peptidase C39 family OM953_17400 PF00390 Malic enzyme, N-terminal domain OM953_17400 PF01515 Phosphate acetyl/butaryl transferase OM953_17400 PF03949 Malic enzyme, NAD binding domain OM953_17405 PF00375 Sodium:dicarboxylate symporter family OM953_17415 PF02743 Cache domain OM953_17415 PF00512 His Kinase A (phospho-acceptor) domain OM953_17415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_17420 PF07690 Major Facilitator Superfamily OM953_17430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM953_17430 PF03466 LysR substrate binding domain OM953_17435 PF00248 Aldo/keto reductase family OM953_17450 PF00196 Bacterial regulatory proteins, luxR family OM953_17450 PF00072 Response regulator receiver domain OM953_17460 PF00512 His Kinase A (phospho-acceptor) domain OM953_17460 PF08521 Two-component sensor kinase N-terminal OM953_17460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_17465 PF00072 Response regulator receiver domain OM953_17465 PF00486 Transcriptional regulatory protein, C terminal OM953_17475 PF03600 Citrate transporter OM953_17480 PF00106 short chain dehydrogenase OM953_17485 PF00356 Bacterial regulatory proteins, lacI family OM953_17500 PF00128 Alpha amylase, catalytic domain OM953_17520 PF03193 RsgA GTPase OM953_17565 PF00664 ABC transporter transmembrane region OM953_17565 PF03412 Peptidase C39 family OM953_17565 PF00005 ABC transporter OM953_17570 PF00155 Aminotransferase class I and II OM953_17585 PF01522 Polysaccharide deacetylase OM953_17590 PF00462 Glutaredoxin OM953_17605 PF01979 Amidohydrolase family OM953_17610 PF01979 Amidohydrolase family OM953_17630 PF02645 Uncharacterised protein, DegV family COG1307 OM953_17635 PF01327 Polypeptide deformylase OM953_17640 PF03960 ArsC family OM953_17655 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) OM953_17660 PF01270 Glycosyl hydrolases family 8 OM953_17665 PF03170 Bacterial cellulose synthase subunit OM953_17670 PF03552 Cellulose synthase OM953_17670 PF07238 PilZ domain OM953_17670 PF00535 Glycosyl transferase family 2 OM953_17685 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family OM953_17685 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain OM953_17720 PF07715 TonB-dependent Receptor Plug Domain OM953_17720 PF00593 TonB dependent receptor OM953_17730 PF00392 Bacterial regulatory proteins, gntR family OM953_17730 PF07702 UTRA domain OM953_17740 PF00263 Bacterial type II and III secretion system protein OM953_17740 PF03958 Bacterial type II/III secretion system short domain OM953_17750 PF10741 Type II secretion system (T2SS), protein M subtype b OM953_17755 PF05137 Fimbrial assembly protein (PilN) OM953_17760 PF03934 Type II secretion system (T2SS), protein K OM953_17770 PF07963 Prokaryotic N-terminal methylation motif OM953_17775 PF12019 Type II transport protein GspH OM953_17780 PF08334 Type II secretion system (T2SS), protein G OM953_17785 PF00482 Type II secretion system (T2SS), protein F OM953_17790 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain OM953_17790 PF00437 Type II/IV secretion system protein OM953_17795 PF04151 Bacterial pre-peptidase C-terminal domain OM953_17795 PF00082 Subtilase family OM953_17800 PF13018 Extended Signal Peptide of Type V secretion system OM953_17800 PF03895 YadA-like membrane anchor domain OM953_17800 PF05658 Head domain of trimeric autotransporter adhesin OM953_17800 PF05662 Coiled stalk of trimeric autotransporter adhesin OM953_17805 PF04151 Bacterial pre-peptidase C-terminal domain OM953_17805 PF00082 Subtilase family OM953_17810 PF05662 Coiled stalk of trimeric autotransporter adhesin OM953_17810 PF13018 Extended Signal Peptide of Type V secretion system OM953_17810 PF03895 YadA-like membrane anchor domain OM953_17810 PF05658 Head domain of trimeric autotransporter adhesin OM953_17820 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal OM953_17820 PF02769 AIR synthase related protein, C-terminal domain OM953_17820 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain OM953_17825 PF10411 Disulfide bond isomerase protein N-terminus OM953_17825 PF13098 Thioredoxin-like domain OM953_17830 PF00589 Phage integrase family OM953_17830 PF02899 Phage integrase, N-terminal SAM-like domain OM953_17845 PF03739 Lipopolysaccharide export system permease LptF/LptG OM953_17855 PF00883 Cytosol aminopeptidase family, catalytic domain OM953_17855 PF02789 Cytosol aminopeptidase family, N-terminal domain OM953_17870 PF08264 Anticodon-binding domain of tRNA OM953_17870 PF00133 tRNA synthetases class I (I, L, M and V) OM953_17870 PF10458 Valyl tRNA synthetase tRNA binding arm OM953_17885 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain OM953_17885 PF01464 Transglycosylase SLT domain OM953_17905 PF01066 CDP-alcohol phosphatidyltransferase OM953_17915 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) OM953_17915 PF03129 Anticodon binding domain OM953_17915 PF04073 Aminoacyl-tRNA editing domain OM953_17920 PF00816 H-NS histone family OM953_17930 PF02405 Permease MlaE OM953_17935 PF00005 ABC transporter OM953_17940 PF03886 ABC-type transport auxiliary lipoprotein component OM953_17940 PF02470 MlaD protein OM953_17960 PF14307 Glycosyltransferase WbsX OM953_17960 PF05045 Rhamnan synthesis protein F OM953_17965 PF01144 Coenzyme A transferase OM953_17970 PF01144 Coenzyme A transferase OM953_17975 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I OM953_17975 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II OM953_17975 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III OM953_17975 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain OM953_17980 PF01050 Mannose-6-phosphate isomerase OM953_17980 PF00483 Nucleotidyl transferase OM953_17985 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain OM953_17985 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain OM953_17985 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain OM953_17990 PF04321 RmlD substrate binding domain OM953_17995 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase OM953_18000 PF00483 Nucleotidyl transferase OM953_18005 PF16363 GDP-mannose 4,6 dehydratase OM953_18010 PF01012 Electron transfer flavoprotein domain OM953_18015 PF00766 Electron transfer flavoprotein FAD-binding domain OM953_18015 PF01012 Electron transfer flavoprotein domain OM953_18025 PF01040 UbiA prenyltransferase family OM953_18030 PF04030 D-arabinono-1,4-lactone oxidase OM953_18030 PF01565 FAD binding domain OM953_18035 PF00106 short chain dehydrogenase OM953_18045 PF01370 NAD dependent epimerase/dehydratase family OM953_18050 PF01593 Flavin containing amine oxidoreductase OM953_18075 PF00535 Glycosyl transferase family 2 OM953_18085 PF00005 ABC transporter OM953_18085 PF14524 Wzt C-terminal domain OM953_18095 PF01053 Cys/Met metabolism PLP-dependent enzyme OM953_18100 PF00571 CBS domain OM953_18100 PF00291 Pyridoxal-phosphate dependent enzyme OM953_18120 PF00437 Type II/IV secretion system protein OM953_18125 PF14497 Glutathione S-transferase, C-terminal domain OM953_18125 PF02798 Glutathione S-transferase, N-terminal domain OM953_18135 PF00271 Helicase conserved C-terminal domain OM953_18135 PF00270 DEAD/DEAH box helicase OM953_18145 PF00593 TonB dependent receptor OM953_18145 PF07715 TonB-dependent Receptor Plug Domain OM953_18150 PF01242 6-pyruvoyl tetrahydropterin synthase OM953_18180 PF13185 GAF domain OM953_18190 PF00756 Putative esterase OM953_18195 PF00593 TonB dependent receptor OM953_18195 PF07715 TonB-dependent Receptor Plug Domain OM953_18200 PF13419 Haloacid dehalogenase-like hydrolase OM953_18205 PF00817 impB/mucB/samB family OM953_18205 PF11799 impB/mucB/samB family C-terminal domain OM953_18210 PF07977 FabA-like domain OM953_18215 PF00109 Beta-ketoacyl synthase, N-terminal domain OM953_18215 PF02801 Beta-ketoacyl synthase, C-terminal domain OM953_18225 PF01432 Peptidase family M3 OM953_18240 PF07731 Multicopper oxidase OM953_18240 PF07732 Multicopper oxidase OM953_18240 PF00394 Multicopper oxidase OM953_18245 PF05275 Copper resistance protein B precursor (CopB) OM953_18250 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily OM953_18275 PF01380 SIS domain OM953_18280 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OM953_18285 PF00005 ABC transporter OM953_18290 PF12704 MacB-like periplasmic core domain OM953_18290 PF02687 FtsX-like permease family OM953_18295 PF12704 MacB-like periplasmic core domain OM953_18295 PF00005 ABC transporter OM953_18295 PF02687 FtsX-like permease family OM953_18305 PF02954 Bacterial regulatory protein, Fis family OM953_18305 PF00158 Sigma-54 interaction domain OM953_18305 PF00072 Response regulator receiver domain OM953_18310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_18310 PF00512 His Kinase A (phospho-acceptor) domain OM953_18315 PF00132 Bacterial transferase hexapeptide (six repeats) OM953_18315 PF14602 Hexapeptide repeat of succinyl-transferase OM953_18315 PF12804 MobA-like NTP transferase domain OM953_18330 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain OM953_18330 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain OM953_18335 PF02874 ATP synthase alpha/beta family, beta-barrel domain OM953_18335 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain OM953_18340 PF00231 ATP synthase OM953_18345 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain OM953_18345 PF02874 ATP synthase alpha/beta family, beta-barrel domain OM953_18345 PF00306 ATP synthase alpha/beta chain, C terminal domain OM953_18350 PF00213 ATP synthase delta (OSCP) subunit OM953_18355 PF00430 ATP synthase B/B' CF(0) OM953_18360 PF00137 ATP synthase subunit C OM953_18365 PF00119 ATP synthase A chain OM953_18385 PF07992 Pyridine nucleotide-disulphide oxidoreductase OM953_18385 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain OM953_18395 PF00364 Biotin-requiring enzyme OM953_18395 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) OM953_18395 PF02817 e3 binding domain OM953_18425 PF03180 NLPA lipoprotein OM953_18430 PF00528 Binding-protein-dependent transport system inner membrane component OM953_18435 PF00005 ABC transporter OM953_18435 PF09383 NIL domain OM953_18440 PF00892 EamA-like transporter family OM953_18445 PF04461 Protein of unknown function (DUF520) OM953_18455 PF01627 Hpt domain OM953_18455 PF00512 His Kinase A (phospho-acceptor) domain OM953_18455 PF18415 Histidine kinase receptor ArcB trans-membrane domain OM953_18455 PF00072 Response regulator receiver domain OM953_18455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_18455 PF00989 PAS fold OM953_18475 PF13419 Haloacid dehalogenase-like hydrolase OM953_18480 PF00849 RNA pseudouridylate synthase OM953_18480 PF01479 S4 domain OM953_18485 PF05175 Methyltransferase small domain OM953_18485 PF08468 Methyltransferase small domain N-terminal OM953_18495 PF07995 Glucose / Sorbosone dehydrogenase OM953_18505 PF00512 His Kinase A (phospho-acceptor) domain OM953_18505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_18505 PF00989 PAS fold OM953_18525 PF00842 Alanine racemase, C-terminal domain OM953_18525 PF01168 Alanine racemase, N-terminal domain OM953_18530 PF01266 FAD dependent oxidoreductase OM953_18535 PF01037 Lrp/AsnC ligand binding domain OM953_18545 PF01641 SelR domain OM953_18555 PF01618 MotA/TolQ/ExbB proton channel family OM953_18560 PF00691 OmpA family OM953_18560 PF13677 Membrane MotB of proton-channel complex MotA/MotB OM953_18585 PF01061 ABC-2 type transporter OM953_18595 PF00999 Sodium/hydrogen exchanger family OM953_18600 PF02469 Fasciclin domain OM953_18605 PF03167 Uracil DNA glycosylase superfamily OM953_18615 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase OM953_18625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM953_18625 PF03466 LysR substrate binding domain OM953_18630 PF03358 NADPH-dependent FMN reductase OM953_18635 PF00248 Aldo/keto reductase family OM953_18645 PF01431 Peptidase family M13 OM953_18645 PF05649 Peptidase family M13 OM953_18660 PF13520 Amino acid permease OM953_18670 PF00072 Response regulator receiver domain OM953_18670 PF04397 LytTr DNA-binding domain OM953_18675 PF02743 Cache domain OM953_18675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_18675 PF06580 Histidine kinase OM953_18675 PF00672 HAMP domain OM953_18690 PF05974 Domain of unknown function (DUF892) OM953_18695 PF05067 Manganese containing catalase OM953_18715 PF01339 CheB methylesterase OM953_18715 PF01739 CheR methyltransferase, SAM binding domain OM953_18715 PF03705 CheR methyltransferase, all-alpha domain OM953_18715 PF08448 PAS fold OM953_18730 PF02954 Bacterial regulatory protein, Fis family OM953_18730 PF00072 Response regulator receiver domain OM953_18730 PF00158 Sigma-54 interaction domain OM953_18740 PF01654 Cytochrome bd terminal oxidase subunit I OM953_18745 PF02322 Cytochrome bd terminal oxidase subunit II OM953_18765 PF16363 GDP-mannose 4,6 dehydratase OM953_18775 PF03275 UDP-galactopyranose mutase OM953_18785 PF00005 ABC transporter OM953_18785 PF00664 ABC transporter transmembrane region OM953_18800 PF08240 Alcohol dehydrogenase GroES-like domain OM953_18800 PF13823 Alcohol dehydrogenase GroES-associated OM953_18800 PF00107 Zinc-binding dehydrogenase OM953_18845 PF07715 TonB-dependent Receptor Plug Domain OM953_18845 PF00593 TonB dependent receptor OM953_18865 PF00005 ABC transporter OM953_18875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM953_18875 PF03466 LysR substrate binding domain OM953_18880 PF01042 Endoribonuclease L-PSP OM953_18895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM953_18895 PF00672 HAMP domain OM953_18910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM953_18910 PF03466 LysR substrate binding domain OM953_18915 PF02525 Flavodoxin-like fold OM953_18945 PF00916 Sulfate permease family OM953_18945 PF01740 STAS domain OM953_18955 PF00557 Metallopeptidase family M24 OM953_18965 PF01850 PIN domain OM953_18975 PF13091 PLD-like domain OM953_18975 PF13087 AAA domain OM953_18980 PF00145 C-5 cytosine-specific DNA methylase OM953_19000 PF04610 TrbL/VirB6 plasmid conjugal transfer protein OM953_19005 PF04610 TrbL/VirB6 plasmid conjugal transfer protein OM953_19020 PF07996 Type IV secretion system proteins OM953_19035 PF00589 Phage integrase family OM953_19045 PF02899 Phage integrase, N-terminal SAM-like domain OM953_19045 PF00589 Phage integrase family OM953_19110 PF06791 Prophage tail length tape measure protein OM953_19135 PF04542 Sigma-70 region 2 OM953_19135 PF04545 Sigma-70, region 4 OM953_19135 PF04539 Sigma-70 region 3 OM953_19135 PF03979 Sigma-70 factor, region 1.1 OM953_19135 PF04546 Sigma-70, non-essential region OM953_19135 PF00140 Sigma-70 factor, region 1.2 OM953_19140 PF02580 D-Tyr-tRNA(Tyr) deacylase OM953_19145 PF03279 Bacterial lipid A biosynthesis acyltransferase OM953_19160 PF00925 GTP cyclohydrolase II OM953_19180 PF00535 Glycosyl transferase family 2 OM953_19195 PF01029 NusB family OM953_19195 PF01189 16S rRNA methyltransferase RsmB/F OM953_19200 PF00551 Formyl transferase OM953_19200 PF02911 Formyl transferase, C-terminal domain OM953_19205 PF01327 Polypeptide deformylase OM953_19210 PF01476 LysM domain OM953_19215 PF02481 DNA recombination-mediator protein A OM953_19215 PF17782 DprA winged helix domain OM953_19220 PF04361 Protein of unknown function (DUF494) OM953_19225 PF07963 Prokaryotic N-terminal methylation motif OM953_19225 PF00114 Pilin (bacterial filament) OM953_19235 PF13368 Topoisomerase C-terminal repeat OM953_19235 PF01131 DNA topoisomerase OM953_19235 PF01751 Toprim domain OM953_19240 PF01300 Telomere recombination OM953_19265 PF01343 Peptidase family S49 OM953_19270 PF01554 MatE OM953_19290 PF00270 DEAD/DEAH box helicase OM953_19290 PF18319 PriA DNA helicase Cys-rich region (CRR) domain OM953_19290 PF00271 Helicase conserved C-terminal domain OM953_19290 PF17764 3′ DNA-binding domain (3′BD) OM953_19290 PF18074 Primosomal protein N C-terminal domain OM953_19295 PF00043 Glutathione S-transferase, C-terminal domain OM953_19295 PF13417 Glutathione S-transferase, N-terminal domain OM953_19310 PF07992 Pyridine nucleotide-disulphide oxidoreductase OM953_19315 PF03458 UPF0126 domain OM953_19320 PF04545 Sigma-70, region 4 OM953_19320 PF04542 Sigma-70 region 2 OM953_19325 PF03167 Uracil DNA glycosylase superfamily OM953_19330 PF00072 Response regulator receiver domain OM953_19330 PF01339 CheB methylesterase OM953_19335 PF18075 FtsX extracellular domain OM953_19340 PF00005 ABC transporter OM953_19345 PF00271 Helicase conserved C-terminal domain OM953_19345 PF00270 DEAD/DEAH box helicase OM953_19345 PF12300 ATP-dependent RNA helicase RhlB OM953_19350 PF00085 Thioredoxin OM953_19355 PF07498 Rho termination factor, N-terminal domain OM953_19355 PF07497 Rho termination factor, RNA-binding domain OM953_19355 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain OM953_19360 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) OM953_19365 PF03466 LysR substrate binding domain OM953_19365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM953_19375 PF03971 Monomeric isocitrate dehydrogenase OM953_19385 PF01476 LysM domain OM953_19385 PF04972 BON domain OM953_19390 PF14489 QueF-like protein OM953_19390 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term OM953_19395 PF07687 Peptidase dimerisation domain OM953_19395 PF01546 Peptidase family M20/M25/M40 OM953_19400 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OM953_19405 PF00873 AcrB/AcrD/AcrF family OM953_19410 PF00873 AcrB/AcrD/AcrF family OM953_19425 PF07063 Domain of unknown function (DUF1338) OM953_19465 PF01427 D-ala-D-ala dipeptidase OM953_19470 PF01510 N-acetylmuramoyl-L-alanine amidase OM953_19480 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain OM953_19480 PF13378 Enolase C-terminal domain-like OM953_19490 PF13520 Amino acid permease OM953_19505 PF05360 yiaA/B two helix domain OM953_19510 PF07995 Glucose / Sorbosone dehydrogenase OM953_19515 PF01915 Glycosyl hydrolase family 3 C-terminal domain OM953_19515 PF14310 Fibronectin type III-like domain OM953_19515 PF00933 Glycosyl hydrolase family 3 N terminal domain OM953_19520 PF02152 Dihydroneopterin aldolase OM953_19525 PF00814 Glycoprotease family OM953_19530 PF01165 Ribosomal protein S21 OM953_19535 PF09424 Yqey-like protein OM953_19540 PF03631 Virulence factor BrkB OM953_19545 PF08275 DNA primase catalytic core, N-terminal domain OM953_19545 PF10410 DnaB-helicase binding domain of primase OM953_19545 PF08278 DNA primase DnaG DnaB-binding OM953_19545 PF01807 CHC2 zinc finger OM953_19550 PF13593 SBF-like CPA transporter family (DUF4137) OM953_19560 PF01040 UbiA prenyltransferase family OM953_19585 PF00510 Cytochrome c oxidase subunit III OM953_19590 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 OM953_19600 PF00115 Cytochrome C and Quinol oxidase polypeptide I OM953_19605 PF02790 Cytochrome C oxidase subunit II, transmembrane domain OM953_19605 PF00116 Cytochrome C oxidase subunit II, periplasmic domain OM953_19615 PF18327 Proline utilization A proline dehydrogenase N-terminal domain OM953_19615 PF14850 DNA-binding domain of Proline dehydrogenase OM953_19615 PF01619 Proline dehydrogenase OM953_19615 PF00171 Aldehyde dehydrogenase family OM953_19645 PF00579 tRNA synthetases class I (W and Y) OM953_19650 PF04225 Opacity-associated protein A LysM-like domain OM953_19650 PF01551 Peptidase family M23 OM953_19655 PF03702 Anhydro-N-acetylmuramic acid kinase OM953_19665 PF07690 Major Facilitator Superfamily OM953_19670 PF03372 Endonuclease/Exonuclease/phosphatase family OM953_19675 PF00156 Phosphoribosyl transferase domain OM953_19685 PF13614 AAA domain OM953_19690 PF17762 HTH domain found in ParB protein OM953_19690 PF02195 ParB-like nuclease domain OM953_19700 PF01370 NAD dependent epimerase/dehydratase family OM953_19705 PF00535 Glycosyl transferase family 2 OM953_19720 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I OM953_19720 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II OM953_19720 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III OM953_19720 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain OM953_19725 PF00692 dUTPase OM953_19730 PF04127 DNA / pantothenate metabolism flavoprotein OM953_19730 PF02441 Flavoprotein OM953_19735 PF04002 RadC-like JAB domain OM953_19740 PF03485 Arginyl tRNA synthetase N terminal domain OM953_19740 PF05746 DALR anticodon binding domain OM953_19740 PF00750 tRNA synthetases class I (R) OM953_19755 PF00106 short chain dehydrogenase OM953_19760 PF01757 Acyltransferase family OM953_19765 PF03033 Glycosyltransferase family 28 N-terminal domain OM953_19770 PF00668 Condensation domain OM953_19770 PF00501 AMP-binding enzyme OM953_19770 PF00501 AMP-binding enzyme OM953_19770 PF13193 AMP-binding enzyme C-terminal domain OM953_19770 PF00668 Condensation domain OM953_19770 PF00550 Phosphopantetheine attachment site OM953_19770 PF00975 Thioesterase domain OM953_19770 PF00550 Phosphopantetheine attachment site OM953_19770 PF13193 AMP-binding enzyme C-terminal domain OM953_19770 PF00975 Thioesterase domain OM953_19775 PF17810 Arginine decarboxylase helical bundle domain OM953_19775 PF17944 Arginine decarboxylase C-terminal helical extension OM953_19775 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain OM953_19780 PF17284 Spermidine synthase tetramerisation domain OM953_19805 PF00963 Cohesin domain OM953_19805 PF00754 F5/8 type C domain OM953_19805 PF00041 Fibronectin type III domain OM953_19805 PF02838 Glycosyl hydrolase family 20, domain 2 OM953_19805 PF07555 beta-N-acetylglucosaminidase OM953_19810 PF00543 Nitrogen regulatory protein P-II OM953_19815 PF04380 Membrane fusogenic activity OM953_19820 PF13335 Magnesium chelatase, subunit ChlI C-terminal OM953_19820 PF01078 Magnesium chelatase, subunit ChlI OM953_19835 PF00563 EAL domain OM953_19835 PF12792 CSS motif domain associated with EAL OM953_19840 PF00487 Fatty acid desaturase OM953_19845 PF00175 Oxidoreductase NAD-binding domain OM953_19845 PF00111 2Fe-2S iron-sulfur cluster binding domain OM953_19845 PF00970 Oxidoreductase FAD-binding domain OM953_19850 PF00440 Bacterial regulatory proteins, tetR family OM953_19860 PF01139 tRNA-splicing ligase RtcB OM953_19895 PF01370 NAD dependent epimerase/dehydratase family OM953_19895 PF08338 Domain of unknown function (DUF1731) OM953_19900 PF00486 Transcriptional regulatory protein, C terminal OM953_19900 PF00072 Response regulator receiver domain OM953_19905 PF08521 Two-component sensor kinase N-terminal OM953_19905 PF00512 His Kinase A (phospho-acceptor) domain OM953_19905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_19925 PF00595 PDZ domain OM953_19945 PF01594 AI-2E family transporter OM953_19955 PF02789 Cytosol aminopeptidase family, N-terminal domain OM953_19955 PF00883 Cytosol aminopeptidase family, catalytic domain OM953_19970 PF00199 Catalase OM953_19985 PF00196 Bacterial regulatory proteins, luxR family OM953_19985 PF00072 Response regulator receiver domain OM953_19990 PF07730 Histidine kinase OM953_19995 PF13533 Biotin-lipoyl like OM953_20000 PF00005 ABC transporter OM953_20020 PF00892 EamA-like transporter family OM953_20025 PF00892 EamA-like transporter family OM953_20045 PF00753 Metallo-beta-lactamase superfamily OM953_20050 PF00579 tRNA synthetases class I (W and Y) OM953_20055 PF05532 CsbD-like OM953_20070 PF00491 Arginase family OM953_20095 PF02223 Thymidylate kinase OM953_20110 PF03309 Type III pantothenate kinase OM953_20115 PF08279 HTH domain OM953_20115 PF02237 Biotin protein ligase C terminal domain OM953_20115 PF03099 Biotin/lipoate A/B protein ligase family OM953_20125 PF06167 Glucose-regulated metallo-peptidase M90 OM953_20145 PF00072 Response regulator receiver domain OM953_20145 PF00486 Transcriptional regulatory protein, C terminal OM953_20155 PF01207 Dihydrouridine synthase (Dus) OM953_20170 PF00199 Catalase OM953_20170 PF06628 Catalase-related immune-responsive OM953_20180 PF06733 DEAD_2 OM953_20180 PF13307 Helicase C-terminal domain OM953_20195 PF01488 Shikimate / quinate 5-dehydrogenase OM953_20195 PF18317 Shikimate 5'-dehydrogenase C-terminal domain OM953_20195 PF08501 Shikimate dehydrogenase substrate binding domain OM953_20210 PF00258 Flavodoxin OM953_20210 PF00175 Oxidoreductase NAD-binding domain OM953_20210 PF00667 FAD binding domain OM953_20220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM953_20220 PF03466 LysR substrate binding domain OM953_20235 PF00490 Delta-aminolevulinic acid dehydratase OM953_20265 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region OM953_20265 PF00326 Prolyl oligopeptidase family OM953_20270 PF00043 Glutathione S-transferase, C-terminal domain OM953_20270 PF02798 Glutathione S-transferase, N-terminal domain OM953_20290 PF04820 Tryptophan halogenase OM953_20305 PF00005 ABC transporter OM953_20315 PF01381 Helix-turn-helix OM953_20325 PF01229 Glycosyl hydrolases family 39 OM953_20330 PF02583 Metal-sensitive transcriptional repressor OM953_20335 PF01545 Cation efflux family OM953_20345 PF00593 TonB dependent receptor OM953_20345 PF07715 TonB-dependent Receptor Plug Domain OM953_20355 PF12833 Helix-turn-helix domain OM953_20355 PF01965 DJ-1/PfpI family OM953_20360 PF00970 Oxidoreductase FAD-binding domain OM953_20360 PF00175 Oxidoreductase NAD-binding domain OM953_20360 PF01383 CpcD/allophycocyanin linker domain OM953_20365 PF00005 ABC transporter OM953_20370 PF01061 ABC-2 type transporter OM953_20375 PF02558 Ketopantoate reductase PanE/ApbA OM953_20375 PF08546 Ketopantoate reductase PanE/ApbA C terminal OM953_20395 PF00085 Thioredoxin OM953_20405 PF00268 Ribonucleotide reductase, small chain OM953_20410 PF03477 ATP cone domain OM953_20410 PF02867 Ribonucleotide reductase, barrel domain OM953_20410 PF00317 Ribonucleotide reductase, all-alpha domain OM953_20420 PF00583 Acetyltransferase (GNAT) family OM953_20420 PF13380 CoA binding domain OM953_20420 PF13607 Succinyl-CoA ligase like flavodoxin domain OM953_20425 PF01769 Divalent cation transporter OM953_20425 PF03448 MgtE intracellular N domain OM953_20425 PF00571 CBS domain OM953_20430 PF00194 Eukaryotic-type carbonic anhydrase OM953_20435 PF00999 Sodium/hydrogen exchanger family OM953_20435 PF02254 TrkA-N domain OM953_20440 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain OM953_20440 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain OM953_20445 PF00723 Glycosyl hydrolases family 15 OM953_20460 PF05166 YcgL domain OM953_20465 PF00109 Beta-ketoacyl synthase, N-terminal domain OM953_20465 PF02801 Beta-ketoacyl synthase, C-terminal domain OM953_20475 PF00535 Glycosyl transferase family 2 OM953_20540 PF01553 Acyltransferase OM953_20550 PF00550 Phosphopantetheine attachment site OM953_20555 PF04820 Tryptophan halogenase OM953_20575 PF07676 WD40-like Beta Propeller Repeat OM953_20575 PF00326 Prolyl oligopeptidase family OM953_20590 PF01218 Coproporphyrinogen III oxidase OM953_20595 PF01367 5'-3' exonuclease, C-terminal SAM fold OM953_20595 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain OM953_20595 PF00476 DNA polymerase family A OM953_20595 PF01612 3'-5' exonuclease OM953_20605 PF06812 ImpA, N-terminal, type VI secretion system OM953_20625 PF00069 Protein kinase domain OM953_20640 PF06761 Intracellular multiplication and human macrophage-killing OM953_20640 PF14331 ImcF-related N-terminal domain OM953_20640 PF06744 Type VI secretion protein IcmF C-terminal OM953_20650 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE OM953_20665 PF04717 Type VI secretion system, phage-baseplate injector OM953_20695 PF08281 Sigma-70, region 4 OM953_20695 PF04542 Sigma-70 region 2 OM953_20710 PF00328 Histidine phosphatase superfamily (branch 2) OM953_20745 PF10431 C-terminal, D2-small domain, of ClpB protein OM953_20745 PF17871 AAA lid domain OM953_20745 PF00004 ATPase family associated with various cellular activities (AAA) OM953_20745 PF07724 AAA domain (Cdc48 subfamily) OM953_20755 PF05947 Type VI secretion system, TssF OM953_20760 PF04965 Gene 25-like lysozyme OM953_20765 PF07024 ImpE protein OM953_20770 PF05638 Type VI secretion system effector, Hcp OM953_20775 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath OM953_20780 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 OM953_20795 PF12464 Maltose acetyltransferase OM953_20795 PF14602 Hexapeptide repeat of succinyl-transferase OM953_20805 PF13361 UvrD-like helicase C-terminal domain OM953_20805 PF00580 UvrD/REP helicase N-terminal domain OM953_20815 PF13091 PLD-like domain OM953_20815 PF13396 Phospholipase_D-nuclease N-terminal OM953_20820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM953_20820 PF03466 LysR substrate binding domain OM953_20825 PF03737 Aldolase/RraA OM953_20830 PF04303 PrpF protein OM953_20835 PF04909 Amidohydrolase OM953_20840 PF00471 Ribosomal protein L33 OM953_20845 PF00830 Ribosomal L28 family OM953_20850 PF00873 AcrB/AcrD/AcrF family OM953_20855 PF13533 Biotin-lipoyl like OM953_20875 PF02527 rRNA small subunit methyltransferase G OM953_20880 PF09423 PhoD-like phosphatase OM953_20880 PF16655 PhoD-like phosphatase, N-terminal domain OM953_20885 PF09423 PhoD-like phosphatase OM953_20885 PF16655 PhoD-like phosphatase, N-terminal domain OM953_20890 PF01648 4'-phosphopantetheinyl transferase superfamily OM953_20895 PF04226 Transglycosylase associated protein OM953_20905 PF03372 Endonuclease/Exonuclease/phosphatase family OM953_20910 PF00480 ROK family OM953_20920 PF00639 PPIC-type PPIASE domain OM953_20920 PF09312 SurA N-terminal domain OM953_20930 PF00474 Sodium:solute symporter family OM953_20935 PF04341 Protein of unknown function, DUF485 OM953_20945 PF00501 AMP-binding enzyme OM953_20945 PF13193 AMP-binding enzyme C-terminal domain OM953_20945 PF16177 Acetyl-coenzyme A synthetase N-terminus OM953_20950 PF00072 Response regulator receiver domain OM953_20950 PF00196 Bacterial regulatory proteins, luxR family OM953_20970 PF04616 Glycosyl hydrolases family 43 OM953_20970 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain OM953_20980 PF00248 Aldo/keto reductase family OM953_20995 PF01557 Fumarylacetoacetate (FAA) hydrolase family OM953_21000 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain OM953_21000 PF13378 Enolase C-terminal domain-like OM953_21005 PF05336 L-rhamnose mutarotase OM953_21010 PF07690 Major Facilitator Superfamily OM953_21015 PF09339 IclR helix-turn-helix domain OM953_21015 PF01614 Bacterial transcriptional regulator OM953_21020 PF02659 Putative manganese efflux pump OM953_21025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_21025 PF00512 His Kinase A (phospho-acceptor) domain OM953_21035 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain OM953_21035 PF06165 Glycosyltransferase family 36 OM953_21050 PF01011 PQQ enzyme repeat OM953_21050 PF13360 PQQ-like domain OM953_21050 PF13570 PQQ-like domain OM953_21070 PF04357 TamB, inner membrane protein subunit of TAM complex OM953_21075 PF01103 Surface antigen OM953_21075 PF17243 POTRA domain TamA domain 1 OM953_21100 PF00664 ABC transporter transmembrane region OM953_21100 PF00005 ABC transporter OM953_21100 PF03412 Peptidase C39 family OM953_21110 PF05746 DALR anticodon binding domain OM953_21110 PF02092 Glycyl-tRNA synthetase beta subunit OM953_21115 PF02091 Glycyl-tRNA synthetase alpha subunit OM953_21120 PF00437 Type II/IV secretion system protein OM953_21120 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain OM953_21135 PF00117 Glutamine amidotransferase class-I OM953_21135 PF00958 GMP synthase C terminal domain OM953_21145 PF00902 Sec-independent protein translocase protein (TatC) OM953_21150 PF02416 mttA/Hcf106 family OM953_21155 PF02416 mttA/Hcf106 family OM953_21165 PF00762 Ferrochelatase OM953_21170 PF12697 Alpha/beta hydrolase family OM953_21180 PF04381 Putative exonuclease, RdgC OM953_21185 PF01171 PP-loop family OM953_21195 PF00356 Bacterial regulatory proteins, lacI family OM953_21200 PF07488 Glycosyl hydrolase family 67 middle domain OM953_21200 PF03648 Glycosyl hydrolase family 67 N-terminus OM953_21200 PF07477 Glycosyl hydrolase family 67 C-terminus OM953_21210 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain OM953_21210 PF13378 Enolase C-terminal domain-like OM953_21215 PF04616 Glycosyl hydrolases family 43 OM953_21215 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain OM953_21220 PF01915 Glycosyl hydrolase family 3 C-terminal domain OM953_21220 PF07691 PA14 domain OM953_21220 PF00933 Glycosyl hydrolase family 3 N terminal domain OM953_21220 PF14310 Fibronectin type III-like domain OM953_21225 PF01232 Mannitol dehydrogenase Rossmann domain OM953_21225 PF08125 Mannitol dehydrogenase C-terminal domain OM953_21255 PF00171 Aldehyde dehydrogenase family OM953_21270 PF00202 Aminotransferase class-III OM953_21280 PF02782 FGGY family of carbohydrate kinases, C-terminal domain OM953_21280 PF00370 FGGY family of carbohydrate kinases, N-terminal domain OM953_21295 PF08450 SMP-30/Gluconolactonase/LRE-like region OM953_21300 PF00331 Glycosyl hydrolase family 10 OM953_21305 PF02836 Glycosyl hydrolases family 2, TIM barrel domain OM953_21305 PF00703 Glycosyl hydrolases family 2 OM953_21305 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 OM953_21305 PF16355 Domain of unknown function (DUF4982) OM953_21305 PF02837 Glycosyl hydrolases family 2, sugar binding domain OM953_21310 PF02614 Glucuronate isomerase OM953_21330 PF03422 Carbohydrate binding module (family 6) OM953_21330 PF00331 Glycosyl hydrolase family 10 OM953_21330 PF00553 Cellulose binding domain OM953_21350 PF04616 Glycosyl hydrolases family 43 OM953_21380 PF13749 Putative ATP-dependent DNA helicase recG C-terminal OM953_21380 PF00270 DEAD/DEAH box helicase OM953_21380 PF17191 RecG wedge domain OM953_21395 PF00109 Beta-ketoacyl synthase, N-terminal domain OM953_21395 PF16197 Ketoacyl-synthetase C-terminal extension OM953_21395 PF00107 Zinc-binding dehydrogenase OM953_21395 PF08240 Alcohol dehydrogenase GroES-like domain OM953_21395 PF00698 Acyl transferase domain OM953_21395 PF02801 Beta-ketoacyl synthase, C-terminal domain OM953_21395 PF14765 Polyketide synthase dehydratase OM953_21395 PF00550 Phosphopantetheine attachment site OM953_21395 PF08659 KR domain OM953_21400 PF01553 Acyltransferase OM953_21410 PF00356 Bacterial regulatory proteins, lacI family OM953_21425 PF04820 Tryptophan halogenase OM953_21430 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family OM953_21435 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) OM953_21440 PF04337 Protein of unknown function, DUF480 OM953_21450 PF13302 Acetyltransferase (GNAT) domain OM953_21455 PF00580 UvrD/REP helicase N-terminal domain OM953_21455 PF13361 UvrD-like helicase C-terminal domain OM953_21460 PF00265 Thymidine kinase OM953_21465 PF00512 His Kinase A (phospho-acceptor) domain OM953_21465 PF08446 PAS fold OM953_21465 PF00360 Phytochrome region OM953_21465 PF01590 GAF domain OM953_21465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM953_21470 PF04349 Periplasmic glucan biosynthesis protein, MdoG OM953_21480 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain OM953_21480 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain OM953_21480 PF06827 Zinc finger found in FPG and IleRS OM953_21510 PF03594 Benzoate membrane transport protein OM953_21515 PF01590 GAF domain OM953_21515 PF08446 PAS fold OM953_21515 PF00360 Phytochrome region OM953_21515 PF13426 PAS domain OM953_21520 PF01126 Heme oxygenase OM953_21525 PF07690 Major Facilitator Superfamily OM953_21530 PF01263 Aldose 1-epimerase OM953_21540 PF02810 SEC-C motif OM953_21545 PF01925 Sulfite exporter TauE/SafE OM953_21565 PF01227 GTP cyclohydrolase I OM953_21575 PF07869 Protein of unknown function (DUF1656) OM953_21580 PF00529 HlyD membrane-fusion protein of T1SS OM953_21580 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OM953_21585 PF02321 Outer membrane efflux protein OM953_21590 PF04632 Fusaric acid resistance protein family OM953_21595 PF00083 Sugar (and other) transporter OM953_21605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM953_21605 PF03466 LysR substrate binding domain OM953_21610 PF00106 short chain dehydrogenase OM953_21615 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family OM953_21620 PF13091 PLD-like domain OM953_21620 PF13396 Phospholipase_D-nuclease N-terminal OM953_21685 PF00849 RNA pseudouridylate synthase OM953_21760 PF13538 UvrD-like helicase C-terminal domain OM953_21770 PF17946 RecC C-terminal domain OM953_21805 PF00005 ABC transporter OM953_21810 PF02405 Permease MlaE OM953_21815 PF02470 MlaD protein OM953_21820 PF05494 MlaC protein OM953_21830 PF04333 MlaA lipoprotein OM953_21840 PF00255 Glutathione peroxidase OM953_21850 PF02646 RmuC family OM953_21860 PF13417 Glutathione S-transferase, N-terminal domain OM953_21860 PF00043 Glutathione S-transferase, C-terminal domain OM953_21870 PF13520 Amino acid permease OM953_21875 PF07971 Glycosyl hydrolase family 92 OM953_21875 PF17678 Glycosyl hydrolase family 92 N-terminal domain OM953_21880 PF10947 Protein of unknown function (DUF2628) OM953_21885 PF00990 Diguanylate cyclase, GGDEF domain OM953_21890 PF05651 Putative sugar diacid recognition OM953_21890 PF17853 GGDEF-like domain OM953_21890 PF13556 PucR C-terminal helix-turn-helix domain OM953_21920 PF10672 S-adenosylmethionine-dependent methyltransferase OM953_21920 PF17785 PUA-like domain OM953_21925 PF03741 Integral membrane protein TerC family OM953_21930 PF01694 Rhomboid family OM953_21935 PF03009 Glycerophosphoryl diester phosphodiesterase family OM953_21945 PF01569 PAP2 superfamily OM953_21950 PF12631 MnmE helical domain OM953_21950 PF10396 GTP-binding protein TrmE N-terminus OM953_21950 PF01926 50S ribosome-binding GTPase OM953_21965 PF02096 60Kd inner membrane protein OM953_21965 PF14849 YidC periplasmic domain OM953_21970 PF00825 Ribonuclease P OM953_21975 PF00468 Ribosomal protein L34 OM953_22010 PF02534 Type IV secretory system Conjugative DNA transfer OM953_22030 PF00872 Transposase, Mutator family OM953_22055 PF00437 Type II/IV secretion system protein OM953_22070 PF03135 CagE, TrbE, VirB family, component of type IV transporter system OM953_22085 PF04610 TrbL/VirB6 plasmid conjugal transfer protein OM953_22100 PF03743 Bacterial conjugation TrbI-like protein OM953_22120 PF01131 DNA topoisomerase OM953_22120 PF01751 Toprim domain OM953_22135 PF01396 Topoisomerase DNA binding C4 zinc finger OM953_22135 PF01131 DNA topoisomerase OM953_22135 PF01751 Toprim domain OM953_22135 PF13368 Topoisomerase C-terminal repeat OM953_22150 PF01850 PIN domain OM953_22160 PF02796 Helix-turn-helix domain of resolvase OM953_22160 PF00239 Resolvase, N terminal domain OM953_22180 PF03421 YopJ Serine/Threonine acetyltransferase OM953_22240 PF03377 TAL effector repeat