locus-tag class description DGN07_00010 PF00308 Bacterial dnaA protein DGN07_00010 PF08299 Bacterial dnaA protein helix-turn-helix DGN07_00010 PF11638 DnaA N-terminal domain DGN07_00015 PF00712 DNA polymerase III beta subunit, N-terminal domain DGN07_00015 PF02767 DNA polymerase III beta subunit, central domain DGN07_00015 PF02768 DNA polymerase III beta subunit, C-terminal domain DGN07_00020 PF02463 RecF/RecN/SMC N terminal domain DGN07_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_00025 PF18053 DNA gyrase B subunit insert domain DGN07_00025 PF01751 Toprim domain DGN07_00025 PF00204 DNA gyrase B DGN07_00025 PF00986 DNA gyrase B subunit, carboxyl terminus DGN07_00035 PF01435 Peptidase family M48 DGN07_00045 PF03544 Gram-negative bacterial TonB protein C-terminal DGN07_00050 PF01618 MotA/TolQ/ExbB proton channel family DGN07_00055 PF02472 Biopolymer transport protein ExbD/TolR DGN07_00060 PF02472 Biopolymer transport protein ExbD/TolR DGN07_00070 PF02472 Biopolymer transport protein ExbD/TolR DGN07_00075 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DGN07_00085 PF13091 PLD-like domain DGN07_00085 PF13396 Phospholipase_D-nuclease N-terminal DGN07_00105 PF04055 Radical SAM superfamily DGN07_00115 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) DGN07_00130 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DGN07_00130 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DGN07_00135 PF13180 PDZ domain DGN07_00135 PF03572 Peptidase family S41 DGN07_00140 PF01551 Peptidase family M23 DGN07_00150 PF04389 Peptidase family M28 DGN07_00160 PF00150 Cellulase (glycosyl hydrolase family 5) DGN07_00165 PF00150 Cellulase (glycosyl hydrolase family 5) DGN07_00175 PF00150 Cellulase (glycosyl hydrolase family 5) DGN07_00185 PF08240 Alcohol dehydrogenase GroES-like domain DGN07_00185 PF00107 Zinc-binding dehydrogenase DGN07_00190 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGN07_00190 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DGN07_00195 PF00310 Glutamine amidotransferases class-II DGN07_00195 PF04898 Glutamate synthase central domain DGN07_00195 PF01645 Conserved region in glutamate synthase DGN07_00195 PF01493 GXGXG motif DGN07_00280 PF00270 DEAD/DEAH box helicase DGN07_00280 PF09369 Domain of unknown function (DUF1998) DGN07_00280 PF00271 Helicase conserved C-terminal domain DGN07_00285 PF03006 Haemolysin-III related DGN07_00305 PF00106 short chain dehydrogenase DGN07_00315 PF03466 LysR substrate binding domain DGN07_00315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN07_00335 PF02525 Flavodoxin-like fold DGN07_00360 PF01609 Transposase DDE domain DGN07_00360 PF05598 Transposase domain (DUF772) DGN07_00390 PF03781 Sulfatase-modifying factor enzyme 1 DGN07_00390 PF12867 DinB superfamily DGN07_00400 PF00528 Binding-protein-dependent transport system inner membrane component DGN07_00405 PF00571 CBS domain DGN07_00405 PF00005 ABC transporter DGN07_00420 PF00005 ABC transporter DGN07_00430 PF01734 Patatin-like phospholipase DGN07_00435 PF00593 TonB dependent receptor DGN07_00435 PF07660 Secretin and TonB N terminus short domain DGN07_00435 PF07715 TonB-dependent Receptor Plug Domain DGN07_00440 PF01037 Lrp/AsnC ligand binding domain DGN07_00445 PF00351 Biopterin-dependent aromatic amino acid hydroxylase DGN07_00455 PF00657 GDSL-like Lipase/Acylhydrolase DGN07_00470 PF04962 KduI/IolB family DGN07_00485 PF00356 Bacterial regulatory proteins, lacI family DGN07_00490 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain DGN07_00490 PF04616 Glycosyl hydrolases family 43 DGN07_00495 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DGN07_00505 PF03480 Bacterial extracellular solute-binding protein, family 7 DGN07_00515 PF07859 alpha/beta hydrolase fold DGN07_00515 PF13472 GDSL-like Lipase/Acylhydrolase family DGN07_00520 PF00135 Carboxylesterase family DGN07_00525 PF00248 Aldo/keto reductase family DGN07_00535 PF00128 Alpha amylase, catalytic domain DGN07_00535 PF02806 Alpha amylase, C-terminal all-beta domain DGN07_00535 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DGN07_00540 PF00128 Alpha amylase, catalytic domain DGN07_00540 PF16657 Maltogenic Amylase, C-terminal domain DGN07_00545 PF00128 Alpha amylase, catalytic domain DGN07_00545 PF11896 Domain of unknown function (DUF3416) DGN07_00575 PF01609 Transposase DDE domain DGN07_00575 PF05598 Transposase domain (DUF772) DGN07_00605 PF00872 Transposase, Mutator family DGN07_00620 PF00872 Transposase, Mutator family DGN07_00630 PF00872 Transposase, Mutator family DGN07_00645 PF00294 pfkB family carbohydrate kinase DGN07_00655 PF07055 Enoyl reductase FAD binding domain DGN07_00655 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase DGN07_00655 PF12241 Trans-2-enoyl-CoA reductase catalytic region DGN07_00660 PF18500 CadC C-terminal domain 1 DGN07_00660 PF00486 Transcriptional regulatory protein, C terminal DGN07_00680 PF00196 Bacterial regulatory proteins, luxR family DGN07_00680 PF00072 Response regulator receiver domain DGN07_00685 PF07730 Histidine kinase DGN07_00690 PF00144 Beta-lactamase DGN07_00700 PF01070 FMN-dependent dehydrogenase DGN07_00705 PF02735 Ku70/Ku80 beta-barrel domain DGN07_00725 PF00171 Aldehyde dehydrogenase family DGN07_00745 PF00155 Aminotransferase class I and II DGN07_00750 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain DGN07_00785 PF07726 ATPase family associated with various cellular activities (AAA) DGN07_00785 PF17863 AAA lid domain DGN07_00830 PF08946 Osmosensory transporter coiled coil DGN07_00830 PF00083 Sugar (and other) transporter DGN07_00840 PF00085 Thioredoxin DGN07_00860 PF00293 NUDIX domain DGN07_00860 PF13344 Haloacid dehalogenase-like hydrolase DGN07_00865 PF05598 Transposase domain (DUF772) DGN07_00865 PF01609 Transposase DDE domain DGN07_00895 PF05532 CsbD-like DGN07_00905 PF01609 Transposase DDE domain DGN07_00905 PF05598 Transposase domain (DUF772) DGN07_00915 PF01883 Iron-sulfur cluster assembly protein DGN07_00915 PF10609 NUBPL iron-transfer P-loop NTPase DGN07_00930 PF13091 PLD-like domain DGN07_00935 PF03061 Thioesterase superfamily DGN07_00965 PF08240 Alcohol dehydrogenase GroES-like domain DGN07_00965 PF00107 Zinc-binding dehydrogenase DGN07_00975 PF02673 Bacitracin resistance protein BacA DGN07_00985 PF00120 Glutamine synthetase, catalytic domain DGN07_00985 PF03951 Glutamine synthetase, beta-Grasp domain DGN07_00990 PF00543 Nitrogen regulatory protein P-II DGN07_00995 PF00909 Ammonium Transporter Family DGN07_01000 PF00512 His Kinase A (phospho-acceptor) domain DGN07_01000 PF00989 PAS fold DGN07_01000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_01005 PF02954 Bacterial regulatory protein, Fis family DGN07_01005 PF00072 Response regulator receiver domain DGN07_01005 PF00158 Sigma-54 interaction domain DGN07_01010 PF00080 Copper/zinc superoxide dismutase (SODC) DGN07_01015 PF00080 Copper/zinc superoxide dismutase (SODC) DGN07_01025 PF05598 Transposase domain (DUF772) DGN07_01025 PF01609 Transposase DDE domain DGN07_01040 PF02803 Thiolase, C-terminal domain DGN07_01040 PF00108 Thiolase, N-terminal domain DGN07_01075 PF00581 Rhodanese-like domain DGN07_01080 PF02556 Preprotein translocase subunit SecB DGN07_01085 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DGN07_01085 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DGN07_01100 PF00205 Thiamine pyrophosphate enzyme, central domain DGN07_01100 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DGN07_01100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DGN07_01105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_01110 PF02954 Bacterial regulatory protein, Fis family DGN07_01110 PF00072 Response regulator receiver domain DGN07_01110 PF00158 Sigma-54 interaction domain DGN07_01125 PF07690 Major Facilitator Superfamily DGN07_01130 PF00588 SpoU rRNA Methylase family DGN07_01145 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DGN07_01145 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DGN07_01155 PF00561 alpha/beta hydrolase fold DGN07_01160 PF03692 Putative zinc- or iron-chelating domain DGN07_01165 PF00501 AMP-binding enzyme DGN07_01170 PF00072 Response regulator receiver domain DGN07_01170 PF00486 Transcriptional regulatory protein, C terminal DGN07_01175 PF00144 Beta-lactamase DGN07_01180 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family DGN07_01210 PF03109 ABC1 family DGN07_01220 PF00849 RNA pseudouridylate synthase DGN07_01230 PF00472 RF-1 domain DGN07_01240 PF01112 Asparaginase DGN07_01245 PF01432 Peptidase family M3 DGN07_01250 PF12706 Beta-lactamase superfamily domain DGN07_01275 PF12833 Helix-turn-helix domain DGN07_01280 PF00999 Sodium/hydrogen exchanger family DGN07_01285 PF03466 LysR substrate binding domain DGN07_01285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN07_01290 PF01274 Malate synthase DGN07_01295 PF00463 Isocitrate lyase family DGN07_01300 PF00990 Diguanylate cyclase, GGDEF domain DGN07_01320 PF00326 Prolyl oligopeptidase family DGN07_01325 PF02785 Biotin carboxylase C-terminal domain DGN07_01325 PF00364 Biotin-requiring enzyme DGN07_01325 PF00289 Biotin carboxylase, N-terminal domain DGN07_01325 PF18140 Propionyl-coenzyme A carboxylase BT domain DGN07_01325 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DGN07_01330 PF01039 Carboxyl transferase domain DGN07_01335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DGN07_01335 PF02770 Acyl-CoA dehydrogenase, middle domain DGN07_01335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DGN07_01390 PF07683 Cobalamin synthesis protein cobW C-terminal domain DGN07_01390 PF02492 CobW/HypB/UreG, nucleotide-binding domain DGN07_01410 PF03969 AFG1-like ATPase DGN07_01415 PF01047 MarR family DGN07_01420 PF02566 OsmC-like protein DGN07_01450 PF16884 N-terminal domain of oxidoreductase DGN07_01450 PF00107 Zinc-binding dehydrogenase DGN07_01455 PF00248 Aldo/keto reductase family DGN07_01465 PF00849 RNA pseudouridylate synthase DGN07_01470 PF00593 TonB dependent receptor DGN07_01480 PF08482 ATP-dependent helicase C-terminal DGN07_01480 PF00270 DEAD/DEAH box helicase DGN07_01480 PF04408 Helicase associated domain (HA2) DGN07_01480 PF00271 Helicase conserved C-terminal domain DGN07_01490 PF07308 Protein of unknown function (DUF1456) DGN07_01495 PF00576 HIUase/Transthyretin family DGN07_01500 PF13454 FAD-NAD(P)-binding DGN07_01505 PF09349 OHCU decarboxylase DGN07_01505 PF01014 Uricase DGN07_01520 PF00266 Aminotransferase class-V DGN07_01525 PF07687 Peptidase dimerisation domain DGN07_01525 PF01546 Peptidase family M20/M25/M40 DGN07_01530 PF03466 LysR substrate binding domain DGN07_01530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN07_01535 PF00561 alpha/beta hydrolase fold DGN07_01550 PF01425 Amidase DGN07_01555 PF01156 Inosine-uridine preferring nucleoside hydrolase DGN07_01565 PF00860 Permease family DGN07_01575 PF00111 2Fe-2S iron-sulfur cluster binding domain DGN07_01580 PF00355 Rieske [2Fe-2S] domain DGN07_01585 PF03466 LysR substrate binding domain DGN07_01585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN07_01610 PF03466 LysR substrate binding domain DGN07_01610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN07_01615 PF07690 Major Facilitator Superfamily DGN07_01625 PF00561 alpha/beta hydrolase fold DGN07_01625 PF08386 TAP-like protein DGN07_01630 PF02146 Sir2 family DGN07_01635 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DGN07_01640 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DGN07_01640 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DGN07_01650 PF00551 Formyl transferase DGN07_01655 PF00072 Response regulator receiver domain DGN07_01655 PF00486 Transcriptional regulatory protein, C terminal DGN07_01660 PF00512 His Kinase A (phospho-acceptor) domain DGN07_01660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_01660 PF00672 HAMP domain DGN07_01665 PF00529 HlyD membrane-fusion protein of T1SS DGN07_01665 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGN07_01670 PF00873 AcrB/AcrD/AcrF family DGN07_01675 PF08139 Prokaryotic membrane lipoprotein lipid attachment site DGN07_01675 PF02321 Outer membrane efflux protein DGN07_01685 PF02219 Methylenetetrahydrofolate reductase DGN07_01690 PF02677 Epoxyqueuosine reductase QueH DGN07_01695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN07_01695 PF03466 LysR substrate binding domain DGN07_01700 PF03358 NADPH-dependent FMN reductase DGN07_01710 PF08267 Cobalamin-independent synthase, N-terminal domain DGN07_01710 PF01717 Cobalamin-independent synthase, Catalytic domain DGN07_01715 PF03812 2-keto-3-deoxygluconate permease DGN07_01730 PF05368 NmrA-like family DGN07_01735 PF01638 HxlR-like helix-turn-helix DGN07_01740 PF00872 Transposase, Mutator family DGN07_01755 PF05598 Transposase domain (DUF772) DGN07_01755 PF01609 Transposase DDE domain DGN07_01765 PF00920 Dehydratase family DGN07_01780 PF00132 Bacterial transferase hexapeptide (six repeats) DGN07_01790 PF07690 Major Facilitator Superfamily DGN07_01795 PF01966 HD domain DGN07_01795 PF11871 Domain of unknown function (DUF3391) DGN07_01825 PF01494 FAD binding domain DGN07_01835 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DGN07_01835 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DGN07_01840 PF00230 Major intrinsic protein DGN07_01845 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DGN07_01845 PF01266 FAD dependent oxidoreductase DGN07_01850 PF00455 DeoR C terminal sensor domain DGN07_01850 PF08220 DeoR-like helix-turn-helix domain DGN07_01855 PF00970 Oxidoreductase FAD-binding domain DGN07_01855 PF00111 2Fe-2S iron-sulfur cluster binding domain DGN07_01860 PF00355 Rieske [2Fe-2S] domain DGN07_01865 PF01144 Coenzyme A transferase DGN07_01870 PF01144 Coenzyme A transferase DGN07_01875 PF00108 Thiolase, N-terminal domain DGN07_01875 PF02803 Thiolase, C-terminal domain DGN07_01880 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal DGN07_01880 PF00775 Dioxygenase DGN07_01890 PF10397 Adenylosuccinate lyase C-terminus DGN07_01890 PF00206 Lyase DGN07_01895 PF12146 Serine aminopeptidase, S33 DGN07_01900 PF02627 Carboxymuconolactone decarboxylase family DGN07_01915 PF09339 IclR helix-turn-helix domain DGN07_01915 PF01614 Bacterial transcriptional regulator DGN07_01925 PF07859 alpha/beta hydrolase fold DGN07_01930 PF10677 Protein of unknown function (DUF2490) DGN07_01935 PF13932 GidA associated domain DGN07_01935 PF01134 Glucose inhibited division protein A DGN07_01945 PF00291 Pyridoxal-phosphate dependent enzyme DGN07_01970 PF13649 Methyltransferase domain DGN07_01980 PF12697 Alpha/beta hydrolase family DGN07_01990 PF00155 Aminotransferase class I and II DGN07_01995 PF06968 Biotin and Thiamin Synthesis associated domain DGN07_01995 PF04055 Radical SAM superfamily DGN07_02005 PF01040 UbiA prenyltransferase family DGN07_02030 PF05819 NolX protein DGN07_02035 PF01609 Transposase DDE domain DGN07_02035 PF05598 Transposase domain (DUF772) DGN07_02075 PF01313 Bacterial export proteins, family 3 DGN07_02080 PF00813 FliP family DGN07_02095 PF00771 FHIPEP family DGN07_02100 PF01312 FlhB HrpN YscU SpaS Family DGN07_02115 PF01514 Secretory protein of YscJ/FliF family DGN07_02130 PF18269 T3SS EscN ATPase C-terminal domain DGN07_02130 PF02874 ATP synthase alpha/beta family, beta-barrel domain DGN07_02130 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DGN07_02140 PF01311 Bacterial export proteins, family 1 DGN07_02145 PF00263 Bacterial type II and III secretion system protein DGN07_02145 PF03958 Bacterial type II/III secretion system short domain DGN07_02155 PF01464 Transglycosylase SLT domain DGN07_02190 PF00884 Sulfatase DGN07_02195 PF03109 ABC1 family DGN07_02205 PF05661 Protein of unknown function (DUF808) DGN07_02210 PF00990 Diguanylate cyclase, GGDEF domain DGN07_02215 PF08323 Starch synthase catalytic domain DGN07_02215 PF00534 Glycosyl transferases group 1 DGN07_02220 PF00128 Alpha amylase, catalytic domain DGN07_02220 PF02806 Alpha amylase, C-terminal all-beta domain DGN07_02220 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DGN07_02225 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DGN07_02225 PF00128 Alpha amylase, catalytic domain DGN07_02225 PF11941 Domain of unknown function (DUF3459) DGN07_02230 PF02446 4-alpha-glucanotransferase DGN07_02235 PF00128 Alpha amylase, catalytic domain DGN07_02245 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DGN07_02245 PF00128 Alpha amylase, catalytic domain DGN07_02250 PF13460 NAD(P)H-binding DGN07_02270 PF06903 VirK protein DGN07_02275 PF02321 Outer membrane efflux protein DGN07_02290 PF00873 AcrB/AcrD/AcrF family DGN07_02305 PF00270 DEAD/DEAH box helicase DGN07_02305 PF00271 Helicase conserved C-terminal domain DGN07_02310 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DGN07_02310 PF02817 e3 binding domain DGN07_02310 PF00364 Biotin-requiring enzyme DGN07_02320 PF02779 Transketolase, pyrimidine binding domain DGN07_02320 PF02780 Transketolase, C-terminal domain DGN07_02325 PF00676 Dehydrogenase E1 component DGN07_02340 PF03301 Tryptophan 2,3-dioxygenase DGN07_02345 PF00854 POT family DGN07_02355 PF01047 MarR family DGN07_02360 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DGN07_02385 PF03334 Na+/H+ antiporter subunit DGN07_02390 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) DGN07_02400 PF00361 Proton-conducting membrane transporter DGN07_02405 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DGN07_02410 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DGN07_02410 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter DGN07_02410 PF13244 Domain of unknown function (DUF4040) DGN07_02410 PF00361 Proton-conducting membrane transporter DGN07_02425 PF02868 Thermolysin metallopeptidase, alpha-helical domain DGN07_02425 PF01447 Thermolysin metallopeptidase, catalytic domain DGN07_02425 PF01483 Proprotein convertase P-domain DGN07_02425 PF07504 Fungalysin/Thermolysin Propeptide Motif DGN07_02435 PF01259 SAICAR synthetase DGN07_02440 PF00226 DnaJ domain DGN07_02440 PF05099 Tellurite resistance protein TerB DGN07_02450 PF00834 Ribulose-phosphate 3 epimerase family DGN07_02455 PF00583 Acetyltransferase (GNAT) family DGN07_02460 PF00781 Diacylglycerol kinase catalytic domain DGN07_02465 PF04715 Anthranilate synthase component I, N terminal region DGN07_02465 PF00425 chorismate binding enzyme DGN07_02485 PF01609 Transposase DDE domain DGN07_02485 PF05598 Transposase domain (DUF772) DGN07_02500 PF05598 Transposase domain (DUF772) DGN07_02500 PF01609 Transposase DDE domain DGN07_02510 PF00117 Glutamine amidotransferase class-I DGN07_02520 PF02885 Glycosyl transferase family, helical bundle domain DGN07_02520 PF00591 Glycosyl transferase family, a/b domain DGN07_02525 PF00218 Indole-3-glycerol phosphate synthase DGN07_02535 PF00027 Cyclic nucleotide-binding domain DGN07_02535 PF00325 Bacterial regulatory proteins, crp family DGN07_02540 PF02675 S-adenosylmethionine decarboxylase DGN07_02545 PF00893 Small Multidrug Resistance protein DGN07_02550 PF03232 Ubiquinone biosynthesis protein COQ7 DGN07_02555 PF00572 Ribosomal protein L13 DGN07_02560 PF00380 Ribosomal protein S9/S16 DGN07_02575 PF00293 NUDIX domain DGN07_02585 PF00210 Ferritin-like domain DGN07_02590 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DGN07_02590 PF00072 Response regulator receiver domain DGN07_02590 PF00512 His Kinase A (phospho-acceptor) domain DGN07_02590 PF01627 Hpt domain DGN07_02590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_02590 PF00672 HAMP domain DGN07_02595 PF00072 Response regulator receiver domain DGN07_02595 PF00486 Transcriptional regulatory protein, C terminal DGN07_02615 PF01521 Iron-sulphur cluster biosynthesis DGN07_02625 PF09297 NADH pyrophosphatase zinc ribbon domain DGN07_02625 PF00293 NUDIX domain DGN07_02625 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain DGN07_02630 PF17113 Regulatory signalling modulator protein AmpE DGN07_02630 PF03186 CobD/Cbib protein DGN07_02645 PF07690 Major Facilitator Superfamily DGN07_02650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN07_02650 PF03466 LysR substrate binding domain DGN07_02655 PF07690 Major Facilitator Superfamily DGN07_02660 PF12805 FUSC-like inner membrane protein yccS DGN07_02665 PF02844 Phosphoribosylglycinamide synthetase, N domain DGN07_02665 PF02843 Phosphoribosylglycinamide synthetase, C domain DGN07_02665 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DGN07_02675 PF02142 MGS-like domain DGN07_02675 PF01808 AICARFT/IMPCHase bienzyme DGN07_02680 PF01066 CDP-alcohol phosphatidyltransferase DGN07_02690 PF00782 Dual specificity phosphatase, catalytic domain DGN07_02720 PF02954 Bacterial regulatory protein, Fis family DGN07_02735 PF01381 Helix-turn-helix DGN07_02765 PF00289 Biotin carboxylase, N-terminal domain DGN07_02765 PF02785 Biotin carboxylase C-terminal domain DGN07_02765 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DGN07_02775 PF00364 Biotin-requiring enzyme DGN07_02780 PF01220 Dehydroquinase class II DGN07_02785 PF02683 Cytochrome C biogenesis protein transmembrane region DGN07_02785 PF11412 Disulphide bond corrector protein DsbC DGN07_02790 PF03091 CutA1 divalent ion tolerance protein DGN07_02800 PF04231 Endonuclease I DGN07_02805 PF00166 Chaperonin 10 Kd subunit DGN07_02810 PF00118 TCP-1/cpn60 chaperonin family DGN07_02820 PF07715 TonB-dependent Receptor Plug Domain DGN07_02820 PF00593 TonB dependent receptor DGN07_02825 PF00793 DAHP synthetase I family DGN07_02840 PF08450 SMP-30/Gluconolactonase/LRE-like region DGN07_02850 PF08335 GlnD PII-uridylyltransferase DGN07_02850 PF03710 Glutamate-ammonia ligase adenylyltransferase DGN07_02855 PF02592 Putative vitamin uptake transporter DGN07_02880 PF00881 Nitroreductase family DGN07_02885 PF04264 YceI-like domain DGN07_02910 PF16957 Malonate decarboxylase, alpha subunit, transporter DGN07_02915 PF06857 Malonate decarboxylase delta subunit (MdcD) DGN07_02920 PF01039 Carboxyl transferase domain DGN07_02930 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG DGN07_02935 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase DGN07_02940 PF00698 Acyl transferase domain DGN07_02950 PF07729 FCD domain DGN07_02950 PF00392 Bacterial regulatory proteins, gntR family DGN07_02995 PF07745 Glycosyl hydrolase family 53 DGN07_03000 PF00456 Transketolase, thiamine diphosphate binding domain DGN07_03000 PF17831 Pyruvate dehydrogenase E1 component middle domain DGN07_03010 PF00872 Transposase, Mutator family DGN07_03015 PF01609 Transposase DDE domain DGN07_03015 PF05598 Transposase domain (DUF772) DGN07_03040 PF01609 Transposase DDE domain DGN07_03040 PF05598 Transposase domain (DUF772) DGN07_03065 PF00106 short chain dehydrogenase DGN07_03080 PF00106 short chain dehydrogenase DGN07_03090 PF13409 Glutathione S-transferase, N-terminal domain DGN07_03125 PF00326 Prolyl oligopeptidase family DGN07_03125 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region DGN07_03135 PF07759 Protein of unknown function (DUF1615) DGN07_03145 PF00990 Diguanylate cyclase, GGDEF domain DGN07_03170 PF00892 EamA-like transporter family DGN07_03175 PF03330 Lytic transglycolase DGN07_03180 PF01341 Glycosyl hydrolases family 6 DGN07_03180 PF00041 Fibronectin type III domain DGN07_03180 PF00553 Cellulose binding domain DGN07_03190 PF00324 Amino acid permease DGN07_03200 PF01544 CorA-like Mg2+ transporter protein DGN07_03210 PF01204 Trehalase DGN07_03225 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DGN07_03225 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DGN07_03250 PF00563 EAL domain DGN07_03250 PF00990 Diguanylate cyclase, GGDEF domain DGN07_03250 PF03707 Bacterial signalling protein N terminal repeat DGN07_03260 PF02203 Tar ligand binding domain homologue DGN07_03260 PF00672 HAMP domain DGN07_03260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN07_03265 PF00553 Cellulose binding domain DGN07_03265 PF00150 Cellulase (glycosyl hydrolase family 5) DGN07_03270 PF01740 STAS domain DGN07_03270 PF00916 Sulfate permease family DGN07_03300 PF13632 Glycosyl transferase family group 2 DGN07_03310 PF06580 Histidine kinase DGN07_03310 PF07694 5TMR of 5TMR-LYT DGN07_03315 PF00072 Response regulator receiver domain DGN07_03315 PF04397 LytTr DNA-binding domain DGN07_03320 PF03900 Porphobilinogen deaminase, C-terminal domain DGN07_03320 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DGN07_03350 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DGN07_03350 PF00326 Prolyl oligopeptidase family DGN07_03355 PF00155 Aminotransferase class I and II DGN07_03360 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DGN07_03360 PF00326 Prolyl oligopeptidase family DGN07_03365 PF04304 Protein of unknown function (DUF454) DGN07_03375 PF01678 Diaminopimelate epimerase DGN07_03385 PF02899 Phage integrase, N-terminal SAM-like domain DGN07_03385 PF00589 Phage integrase family DGN07_03390 PF00227 Proteasome subunit DGN07_03395 PF00004 ATPase family associated with various cellular activities (AAA) DGN07_03395 PF10431 C-terminal, D2-small domain, of ClpB protein DGN07_03395 PF07724 AAA domain (Cdc48 subfamily) DGN07_03405 PF13673 Acetyltransferase (GNAT) domain DGN07_03410 PF13533 Biotin-lipoyl like DGN07_03420 PF01209 ubiE/COQ5 methyltransferase family DGN07_03425 PF00563 EAL domain DGN07_03425 PF00990 Diguanylate cyclase, GGDEF domain DGN07_03425 PF03707 Bacterial signalling protein N terminal repeat DGN07_03430 PF11838 ERAP1-like C-terminal domain DGN07_03430 PF01433 Peptidase family M1 domain DGN07_03470 PF00107 Zinc-binding dehydrogenase DGN07_03470 PF08240 Alcohol dehydrogenase GroES-like domain DGN07_03485 PF00294 pfkB family carbohydrate kinase DGN07_03495 PF04085 rod shape-determining protein MreC DGN07_03505 PF03717 Penicillin-binding Protein dimerisation domain DGN07_03505 PF00905 Penicillin binding protein transpeptidase domain DGN07_03510 PF01098 Cell cycle protein DGN07_03515 PF00295 Glycosyl hydrolases family 28 DGN07_03520 PF13406 Transglycosylase SLT domain DGN07_03525 PF05036 Sporulation related domain DGN07_03525 PF03330 Lytic transglycolase DGN07_03535 PF07943 Penicillin-binding protein 5, C-terminal domain DGN07_03535 PF00768 D-alanyl-D-alanine carboxypeptidase DGN07_03545 PF04359 Protein of unknown function (DUF493) DGN07_03550 PF03099 Biotin/lipoate A/B protein ligase family DGN07_03555 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DGN07_03555 PF04055 Radical SAM superfamily DGN07_03560 PF03572 Peptidase family S41 DGN07_03560 PF00595 PDZ domain DGN07_03560 PF17804 Tail specific protease N-terminal domain DGN07_03560 PF11818 C-terminal domain of tail specific protease (DUF3340) DGN07_03570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN07_03570 PF03466 LysR substrate binding domain DGN07_03580 PF01467 Cytidylyltransferase-like DGN07_03580 PF00293 NUDIX domain DGN07_03615 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DGN07_03615 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DGN07_03620 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DGN07_03620 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DGN07_03625 PF04972 BON domain DGN07_03630 PF00360 Phytochrome region DGN07_03630 PF08446 PAS fold DGN07_03630 PF00512 His Kinase A (phospho-acceptor) domain DGN07_03630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_03630 PF01590 GAF domain DGN07_03635 PF00072 Response regulator receiver domain DGN07_03640 PF00512 His Kinase A (phospho-acceptor) domain DGN07_03640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_03645 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DGN07_03695 PF03958 Bacterial type II/III secretion system short domain DGN07_03695 PF00263 Bacterial type II and III secretion system protein DGN07_03700 PF00437 Type II/IV secretion system protein DGN07_03705 PF00482 Type II secretion system (T2SS), protein F DGN07_03710 PF08334 Type II secretion system (T2SS), protein G DGN07_03710 PF07963 Prokaryotic N-terminal methylation motif DGN07_03715 PF12019 Type II transport protein GspH DGN07_03715 PF07963 Prokaryotic N-terminal methylation motif DGN07_03720 PF02501 Type II secretion system (T2SS), protein I DGN07_03720 PF07963 Prokaryotic N-terminal methylation motif DGN07_03725 PF11612 Type II secretion system (T2SS), protein J DGN07_03725 PF07963 Prokaryotic N-terminal methylation motif DGN07_03730 PF03934 Type II secretion system (T2SS), protein K DGN07_03755 PF02837 Glycosyl hydrolases family 2, sugar binding domain DGN07_03755 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DGN07_03755 PF00703 Glycosyl hydrolases family 2 DGN07_03755 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 DGN07_03755 PF16355 Domain of unknown function (DUF4982) DGN07_03770 PF07702 UTRA domain DGN07_03770 PF00392 Bacterial regulatory proteins, gntR family DGN07_03775 PF07690 Major Facilitator Superfamily DGN07_03780 PF00356 Bacterial regulatory proteins, lacI family DGN07_03785 PF01380 SIS domain DGN07_03790 PF01979 Amidohydrolase family DGN07_03805 PF12627 Probable RNA and SrmB- binding site of polymerase A DGN07_03805 PF01743 Poly A polymerase head domain DGN07_03805 PF01966 HD domain DGN07_03810 PF00732 GMC oxidoreductase DGN07_03810 PF05199 GMC oxidoreductase DGN07_03815 PF00171 Aldehyde dehydrogenase family DGN07_03820 PF02028 BCCT, betaine/carnitine/choline family transporter DGN07_03835 PF01323 DSBA-like thioredoxin domain DGN07_03845 PF00034 Cytochrome c DGN07_03850 PF01926 50S ribosome-binding GTPase DGN07_03870 PF04107 Glutamate-cysteine ligase family 2(GCS2) DGN07_03875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_03875 PF00672 HAMP domain DGN07_03875 PF00512 His Kinase A (phospho-acceptor) domain DGN07_03880 PF00072 Response regulator receiver domain DGN07_03880 PF00486 Transcriptional regulatory protein, C terminal DGN07_03895 PF02583 Metal-sensitive transcriptional repressor DGN07_03900 PF08240 Alcohol dehydrogenase GroES-like domain DGN07_03900 PF00107 Zinc-binding dehydrogenase DGN07_03905 PF04828 Glutathione-dependent formaldehyde-activating enzyme DGN07_03910 PF00756 Putative esterase DGN07_03920 PF00392 Bacterial regulatory proteins, gntR family DGN07_03920 PF00155 Aminotransferase class I and II DGN07_03925 PF02567 Phenazine biosynthesis-like protein DGN07_03945 PF12848 ABC transporter DGN07_03945 PF00005 ABC transporter DGN07_03955 PF00464 Serine hydroxymethyltransferase DGN07_03960 PF03477 ATP cone domain DGN07_03970 PF01872 RibD C-terminal domain DGN07_03970 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DGN07_03980 PF00677 Lumazine binding domain DGN07_03985 PF00925 GTP cyclohydrolase II DGN07_03985 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DGN07_03990 PF00885 6,7-dimethyl-8-ribityllumazine synthase DGN07_03995 PF01029 NusB family DGN07_04000 PF02769 AIR synthase related protein, C-terminal domain DGN07_04000 PF00586 AIR synthase related protein, N-terminal domain DGN07_04025 PF03814 Potassium-transporting ATPase A subunit DGN07_04035 PF02669 K+-transporting ATPase, c chain DGN07_04040 PF00512 His Kinase A (phospho-acceptor) domain DGN07_04040 PF13493 Domain of unknown function (DUF4118) DGN07_04040 PF13492 GAF domain DGN07_04040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_04040 PF02702 Osmosensitive K+ channel His kinase sensor domain DGN07_04045 PF00072 Response regulator receiver domain DGN07_04045 PF00486 Transcriptional regulatory protein, C terminal DGN07_04050 PF02913 FAD linked oxidases, C-terminal domain DGN07_04050 PF01565 FAD binding domain DGN07_04055 PF04307 LexA-binding, inner membrane-associated putative hydrolase DGN07_04060 PF02021 Uncharacterised protein family UPF0102 DGN07_04070 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DGN07_04085 PF02381 MraZ protein, putative antitoxin-like DGN07_04090 PF01795 MraW methylase family DGN07_04095 PF04999 Cell division protein FtsL DGN07_04100 PF00905 Penicillin binding protein transpeptidase domain DGN07_04100 PF03717 Penicillin-binding Protein dimerisation domain DGN07_04105 PF01225 Mur ligase family, catalytic domain DGN07_04105 PF02875 Mur ligase family, glutamate ligase domain DGN07_04105 PF08245 Mur ligase middle domain DGN07_04110 PF01225 Mur ligase family, catalytic domain DGN07_04110 PF02875 Mur ligase family, glutamate ligase domain DGN07_04110 PF08245 Mur ligase middle domain DGN07_04115 PF00953 Glycosyl transferase family 4 DGN07_04120 PF01098 Cell cycle protein DGN07_04125 PF03033 Glycosyltransferase family 28 N-terminal domain DGN07_04125 PF04101 Glycosyltransferase family 28 C-terminal domain DGN07_04130 PF01225 Mur ligase family, catalytic domain DGN07_04130 PF02875 Mur ligase family, glutamate ligase domain DGN07_04130 PF08245 Mur ligase middle domain DGN07_04135 PF01820 D-ala D-ala ligase N-terminus DGN07_04135 PF07478 D-ala D-ala ligase C-terminus DGN07_04140 PF08478 POTRA domain, FtsQ-type DGN07_04140 PF03799 Cell division protein FtsQ DGN07_04145 PF02491 SHS2 domain inserted in FTSA DGN07_04150 PF12327 FtsZ family, C-terminal domain DGN07_04150 PF00091 Tubulin/FtsZ family, GTPase domain DGN07_04155 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DGN07_04165 PF01476 LysM domain DGN07_04165 PF08525 Opacity-associated protein A N-terminal motif DGN07_04165 PF01551 Peptidase family M23 DGN07_04170 PF07517 SecA DEAD-like domain DGN07_04170 PF07516 SecA Wing and Scaffold domain DGN07_04170 PF01043 SecA preprotein cross-linking domain DGN07_04170 PF02810 SEC-C motif DGN07_04175 PF00293 NUDIX domain DGN07_04185 PF02219 Methylenetetrahydrofolate reductase DGN07_04200 PF00698 Acyl transferase domain DGN07_04200 PF08240 Alcohol dehydrogenase GroES-like domain DGN07_04200 PF00107 Zinc-binding dehydrogenase DGN07_04200 PF16197 Ketoacyl-synthetase C-terminal extension DGN07_04200 PF02801 Beta-ketoacyl synthase, C-terminal domain DGN07_04200 PF08659 KR domain DGN07_04200 PF00550 Phosphopantetheine attachment site DGN07_04200 PF14765 Polyketide synthase dehydratase DGN07_04200 PF00109 Beta-ketoacyl synthase, N-terminal domain DGN07_04205 PF00082 Subtilase family DGN07_04205 PF09286 Pro-kumamolisin, activation domain DGN07_04215 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DGN07_04225 PF00128 Alpha amylase, catalytic domain DGN07_04255 PF00685 Sulfotransferase domain DGN07_04265 PF13649 Methyltransferase domain DGN07_04270 PF05221 S-adenosyl-L-homocysteine hydrolase DGN07_04270 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DGN07_04280 PF00311 Phosphoenolpyruvate carboxylase DGN07_04300 PF01389 OmpA-like transmembrane domain DGN07_04300 PF00691 OmpA family DGN07_04315 PF00328 Histidine phosphatase superfamily (branch 2) DGN07_04320 PF02773 S-adenosylmethionine synthetase, C-terminal domain DGN07_04320 PF02772 S-adenosylmethionine synthetase, central domain DGN07_04320 PF00438 S-adenosylmethionine synthetase, N-terminal domain DGN07_04330 PF13649 Methyltransferase domain DGN07_04335 PF01207 Dihydrouridine synthase (Dus) DGN07_04350 PF00294 pfkB family carbohydrate kinase DGN07_04355 PF07670 Nucleoside recognition DGN07_04355 PF07662 Na+ dependent nucleoside transporter C-terminus DGN07_04355 PF01773 Na+ dependent nucleoside transporter N-terminus DGN07_04365 PF00248 Aldo/keto reductase family DGN07_04375 PF07715 TonB-dependent Receptor Plug Domain DGN07_04375 PF00593 TonB dependent receptor DGN07_04395 PF00528 Binding-protein-dependent transport system inner membrane component DGN07_04400 PF00005 ABC transporter DGN07_04410 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DGN07_04420 PF00005 ABC transporter DGN07_04425 PF13472 GDSL-like Lipase/Acylhydrolase family DGN07_04430 PF00486 Transcriptional regulatory protein, C terminal DGN07_04430 PF00072 Response regulator receiver domain DGN07_04435 PF08521 Two-component sensor kinase N-terminal DGN07_04435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_04435 PF00512 His Kinase A (phospho-acceptor) domain DGN07_04445 PF01219 Prokaryotic diacylglycerol kinase DGN07_04465 PF01790 Prolipoprotein diacylglyceryl transferase DGN07_04470 PF00303 Thymidylate synthase DGN07_04480 PF00186 Dihydrofolate reductase DGN07_04485 PF00158 Sigma-54 interaction domain DGN07_04490 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DGN07_04490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DGN07_04495 PF00005 ABC transporter DGN07_04500 PF00528 Binding-protein-dependent transport system inner membrane component DGN07_04510 PF00296 Luciferase-like monooxygenase DGN07_04520 PF03358 NADPH-dependent FMN reductase DGN07_04540 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DGN07_04545 PF00528 Binding-protein-dependent transport system inner membrane component DGN07_04550 PF00528 Binding-protein-dependent transport system inner membrane component DGN07_04550 PF12911 N-terminal TM domain of oligopeptide transport permease C DGN07_04555 PF00005 ABC transporter DGN07_04555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DGN07_04560 PF00149 Calcineurin-like phosphoesterase DGN07_04565 PF04379 ApaG domain DGN07_04570 PF00398 Ribosomal RNA adenine dimethylase DGN07_04575 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DGN07_04580 PF00639 PPIC-type PPIASE domain DGN07_04580 PF09312 SurA N-terminal domain DGN07_04585 PF03968 OstA-like protein DGN07_04585 PF04453 LPS transport system D DGN07_04610 PF00850 Histone deacetylase domain DGN07_04615 PF01923 Cobalamin adenosyltransferase DGN07_04630 PF01494 FAD binding domain DGN07_04635 PF01494 FAD binding domain DGN07_04655 PF07729 FCD domain DGN07_04655 PF00392 Bacterial regulatory proteins, gntR family DGN07_04660 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DGN07_04665 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DGN07_04665 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit DGN07_04670 PF03466 LysR substrate binding domain DGN07_04670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN07_04680 PF00171 Aldehyde dehydrogenase family DGN07_04685 PF00378 Enoyl-CoA hydratase/isomerase DGN07_04710 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DGN07_04710 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DGN07_04715 PF01728 FtsJ-like methyltransferase DGN07_04715 PF18125 RlmM ferredoxin-like domain DGN07_04740 PF00892 EamA-like transporter family DGN07_04750 PF00749 tRNA synthetases class I (E and Q), catalytic domain DGN07_04750 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DGN07_04770 PF00990 Diguanylate cyclase, GGDEF domain DGN07_04770 PF00072 Response regulator receiver domain DGN07_04775 PF00072 Response regulator receiver domain DGN07_04775 PF17149 Periplasmic sensor domain found in signal transduction proteins DGN07_04775 PF00672 HAMP domain DGN07_04775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_04775 PF00512 His Kinase A (phospho-acceptor) domain DGN07_04775 PF01627 Hpt domain DGN07_04780 PF00196 Bacterial regulatory proteins, luxR family DGN07_04780 PF00072 Response regulator receiver domain DGN07_04790 PF01625 Peptide methionine sulfoxide reductase DGN07_04800 PF00923 Transaldolase/Fructose-6-phosphate aldolase DGN07_04805 PF01272 Transcription elongation factor, GreA/GreB, C-term DGN07_04805 PF14760 Rnk N-terminus DGN07_04815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN07_04815 PF03466 LysR substrate binding domain DGN07_04820 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGN07_04820 PF13192 Thioredoxin domain DGN07_04825 PF10417 C-terminal domain of 1-Cys peroxiredoxin DGN07_04825 PF00578 AhpC/TSA family DGN07_04830 PF05175 Methyltransferase small domain DGN07_04830 PF17827 PrmC N-terminal domain DGN07_04835 PF00561 alpha/beta hydrolase fold DGN07_04845 PF00293 NUDIX domain DGN07_04850 PF01612 3'-5' exonuclease DGN07_04850 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DGN07_04850 PF01367 5'-3' exonuclease, C-terminal SAM fold DGN07_04850 PF00476 DNA polymerase family A DGN07_04875 PF05598 Transposase domain (DUF772) DGN07_04875 PF01609 Transposase DDE domain DGN07_04890 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DGN07_04890 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DGN07_04890 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DGN07_04910 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DGN07_04915 PF02233 NAD(P) transhydrogenase beta subunit DGN07_04935 PF01063 Amino-transferase class IV DGN07_04940 PF00082 Subtilase family DGN07_04940 PF04151 Bacterial pre-peptidase C-terminal domain DGN07_04945 PF00082 Subtilase family DGN07_04945 PF04151 Bacterial pre-peptidase C-terminal domain DGN07_04950 PF00082 Subtilase family DGN07_04950 PF04151 Bacterial pre-peptidase C-terminal domain DGN07_04955 PF04073 Aminoacyl-tRNA editing domain DGN07_04975 PF03358 NADPH-dependent FMN reductase DGN07_04980 PF03631 Virulence factor BrkB DGN07_04985 PF08534 Redoxin DGN07_04990 PF00708 Acylphosphatase DGN07_05000 PF03976 Polyphosphate kinase 2 (PPK2) DGN07_05005 PF00994 Probable molybdopterin binding domain DGN07_05015 PF03462 PCRF domain DGN07_05015 PF00472 RF-1 domain DGN07_05020 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DGN07_05020 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DGN07_05020 PF01488 Shikimate / quinate 5-dehydrogenase DGN07_05030 PF03550 Outer membrane lipoprotein LolB DGN07_05035 PF08544 GHMP kinases C terminal DGN07_05035 PF00288 GHMP kinases N terminal domain DGN07_05045 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DGN07_05045 PF14572 Phosphoribosyl synthetase-associated domain DGN07_05050 PF01386 Ribosomal L25p family DGN07_05050 PF14693 Ribosomal protein TL5, C-terminal domain DGN07_05055 PF01195 Peptidyl-tRNA hydrolase DGN07_05060 PF01926 50S ribosome-binding GTPase DGN07_05060 PF06071 Protein of unknown function (DUF933) DGN07_05080 PF00009 Elongation factor Tu GTP binding domain DGN07_05080 PF03144 Elongation factor Tu domain 2 DGN07_05080 PF03143 Elongation factor Tu C-terminal domain DGN07_05090 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DGN07_05095 PF00467 KOW motif DGN07_05095 PF02357 Transcription termination factor nusG DGN07_05100 PF00298 Ribosomal protein L11, RNA binding domain DGN07_05100 PF03946 Ribosomal protein L11, N-terminal domain DGN07_05105 PF00687 Ribosomal protein L1p/L10e family DGN07_05110 PF00466 Ribosomal protein L10 DGN07_05115 PF16320 Ribosomal protein L7/L12 dimerisation domain DGN07_05115 PF00542 Ribosomal protein L7/L12 C-terminal domain DGN07_05120 PF04563 RNA polymerase beta subunit DGN07_05120 PF04561 RNA polymerase Rpb2, domain 2 DGN07_05120 PF04565 RNA polymerase Rpb2, domain 3 DGN07_05120 PF10385 RNA polymerase beta subunit external 1 domain DGN07_05120 PF00562 RNA polymerase Rpb2, domain 6 DGN07_05120 PF04560 RNA polymerase Rpb2, domain 7 DGN07_05125 PF04983 RNA polymerase Rpb1, domain 3 DGN07_05125 PF04998 RNA polymerase Rpb1, domain 5 DGN07_05125 PF05000 RNA polymerase Rpb1, domain 4 DGN07_05125 PF00623 RNA polymerase Rpb1, domain 2 DGN07_05125 PF04997 RNA polymerase Rpb1, domain 1 DGN07_05130 PF00164 Ribosomal protein S12/S23 DGN07_05135 PF00177 Ribosomal protein S7p/S5e DGN07_05140 PF03764 Elongation factor G, domain IV DGN07_05140 PF00679 Elongation factor G C-terminus DGN07_05140 PF14492 Elongation Factor G, domain II DGN07_05140 PF03144 Elongation factor Tu domain 2 DGN07_05140 PF00009 Elongation factor Tu GTP binding domain DGN07_05145 PF03144 Elongation factor Tu domain 2 DGN07_05145 PF00009 Elongation factor Tu GTP binding domain DGN07_05145 PF03143 Elongation factor Tu C-terminal domain DGN07_05150 PF00338 Ribosomal protein S10p/S20e DGN07_05155 PF00297 Ribosomal protein L3 DGN07_05160 PF00573 Ribosomal protein L4/L1 family DGN07_05165 PF00276 Ribosomal protein L23 DGN07_05170 PF00181 Ribosomal Proteins L2, RNA binding domain DGN07_05170 PF03947 Ribosomal Proteins L2, C-terminal domain DGN07_05175 PF00203 Ribosomal protein S19 DGN07_05180 PF00237 Ribosomal protein L22p/L17e DGN07_05185 PF00189 Ribosomal protein S3, C-terminal domain DGN07_05185 PF07650 KH domain DGN07_05190 PF00252 Ribosomal protein L16p/L10e DGN07_05195 PF00831 Ribosomal L29 protein DGN07_05200 PF00366 Ribosomal protein S17 DGN07_05205 PF00238 Ribosomal protein L14p/L23e DGN07_05210 PF00467 KOW motif DGN07_05210 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DGN07_05215 PF00673 ribosomal L5P family C-terminus DGN07_05215 PF00281 Ribosomal protein L5 DGN07_05220 PF00253 Ribosomal protein S14p/S29e DGN07_05225 PF00410 Ribosomal protein S8 DGN07_05230 PF00347 Ribosomal protein L6 DGN07_05235 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DGN07_05240 PF00333 Ribosomal protein S5, N-terminal domain DGN07_05240 PF03719 Ribosomal protein S5, C-terminal domain DGN07_05245 PF00327 Ribosomal protein L30p/L7e DGN07_05250 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DGN07_05255 PF00344 SecY translocase DGN07_05260 PF00416 Ribosomal protein S13/S18 DGN07_05265 PF00411 Ribosomal protein S11 DGN07_05270 PF00163 Ribosomal protein S4/S9 N-terminal domain DGN07_05270 PF01479 S4 domain DGN07_05275 PF01000 RNA polymerase Rpb3/RpoA insert domain DGN07_05275 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DGN07_05275 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DGN07_05280 PF01196 Ribosomal protein L17 DGN07_05285 PF02600 Disulfide bond formation protein DsbB DGN07_05305 PF01474 Class-II DAHP synthetase family DGN07_05320 PF01425 Amidase DGN07_05330 PF00009 Elongation factor Tu GTP binding domain DGN07_05330 PF03144 Elongation factor Tu domain 2 DGN07_05330 PF00679 Elongation factor G C-terminus DGN07_05335 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DGN07_05340 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DGN07_05340 PF00056 lactate/malate dehydrogenase, NAD binding domain DGN07_05345 PF00043 Glutathione S-transferase, C-terminal domain DGN07_05345 PF02798 Glutathione S-transferase, N-terminal domain DGN07_05365 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DGN07_05365 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGN07_05370 PF08240 Alcohol dehydrogenase GroES-like domain DGN07_05370 PF00107 Zinc-binding dehydrogenase DGN07_05380 PF00691 OmpA family DGN07_05380 PF05736 OprF membrane domain DGN07_05390 PF00849 RNA pseudouridylate synthase DGN07_05400 PF00155 Aminotransferase class I and II DGN07_05410 PF00528 Binding-protein-dependent transport system inner membrane component DGN07_05415 PF00528 Binding-protein-dependent transport system inner membrane component DGN07_05420 PF00005 ABC transporter DGN07_05420 PF17850 CysA C-terminal regulatory domain DGN07_05420 PF12857 TOBE-like domain DGN07_05430 PF08240 Alcohol dehydrogenase GroES-like domain DGN07_05430 PF00107 Zinc-binding dehydrogenase DGN07_05440 PF05506 Domain of unknown function (DUF756) DGN07_05440 PF04185 Phosphoesterase family DGN07_05445 PF10459 Peptidase S46 DGN07_05450 PF00300 Histidine phosphatase superfamily (branch 1) DGN07_05455 PF02875 Mur ligase family, glutamate ligase domain DGN07_05455 PF08245 Mur ligase middle domain DGN07_05470 PF00156 Phosphoribosyl transferase domain DGN07_05475 PF04305 Protein of unknown function (DUF455) DGN07_05495 PF00149 Calcineurin-like phosphoesterase DGN07_05500 PF01569 PAP2 superfamily DGN07_05505 PF00534 Glycosyl transferases group 1 DGN07_05505 PF13439 Glycosyltransferase Family 4 DGN07_05510 PF02541 Ppx/GppA phosphatase family DGN07_05515 PF02503 Polyphosphate kinase middle domain DGN07_05515 PF13090 Polyphosphate kinase C-terminal domain 2 DGN07_05515 PF17941 Polyphosphate kinase C-terminal domain 1 DGN07_05515 PF13089 Polyphosphate kinase N-terminal domain DGN07_05520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_05520 PF00512 His Kinase A (phospho-acceptor) domain DGN07_05520 PF00989 PAS fold DGN07_05520 PF11808 Phosphate regulon sensor protein PhoR DGN07_05525 PF00072 Response regulator receiver domain DGN07_05525 PF00486 Transcriptional regulatory protein, C terminal DGN07_05530 PF13181 Tetratricopeptide repeat DGN07_05530 PF01435 Peptidase family M48 DGN07_05535 PF00462 Glutaredoxin DGN07_05545 PF00180 Isocitrate/isopropylmalate dehydrogenase DGN07_05585 PF05698 Bacterial trigger factor protein (TF) C-terminus DGN07_05585 PF05697 Bacterial trigger factor protein (TF) DGN07_05590 PF00574 Clp protease DGN07_05595 PF07724 AAA domain (Cdc48 subfamily) DGN07_05595 PF10431 C-terminal, D2-small domain, of ClpB protein DGN07_05595 PF06689 ClpX C4-type zinc finger DGN07_05600 PF00004 ATPase family associated with various cellular activities (AAA) DGN07_05600 PF02190 ATP-dependent protease La (LON) substrate-binding domain DGN07_05600 PF05362 Lon protease (S16) C-terminal proteolytic domain DGN07_05605 PF00216 Bacterial DNA-binding protein DGN07_05635 PF05257 CHAP domain DGN07_05635 PF01476 LysM domain DGN07_05640 PF16123 Hydroxyacylglutathione hydrolase C-terminus DGN07_05640 PF00753 Metallo-beta-lactamase superfamily DGN07_05650 PF00075 RNase H DGN07_05655 PF00929 Exonuclease DGN07_05675 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DGN07_05685 PF00753 Metallo-beta-lactamase superfamily DGN07_05685 PF12706 Beta-lactamase superfamily domain DGN07_05690 PF06463 Molybdenum Cofactor Synthesis C DGN07_05690 PF04055 Radical SAM superfamily DGN07_05700 PF01967 MoaC family DGN07_05705 PF02597 ThiS family DGN07_05710 PF02391 MoaE protein DGN07_05745 PF01555 DNA methylase DGN07_05810 PF12169 DNA polymerase III subunits gamma and tau domain III DGN07_05810 PF12170 DNA polymerase III tau subunit V interacting with alpha DGN07_05810 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding DGN07_05815 PF02575 YbaB/EbfC DNA-binding family DGN07_05820 PF02132 RecR protein DGN07_05820 PF13662 Toprim domain DGN07_05825 PF01230 HIT domain DGN07_05835 PF11992 Domain of unknown function (DUF3488) DGN07_05835 PF13559 Domain of unknown function (DUF4129) DGN07_05835 PF01841 Transglutaminase-like superfamily DGN07_05845 PF17863 AAA lid domain DGN07_05845 PF07726 ATPase family associated with various cellular activities (AAA) DGN07_05870 PF02545 Maf-like protein DGN07_05875 PF02620 Large ribosomal RNA subunit accumulation protein YceD DGN07_05880 PF01783 Ribosomal L32p protein family DGN07_05885 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DGN07_05885 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DGN07_05895 PF00698 Acyl transferase domain DGN07_05905 PF00550 Phosphopantetheine attachment site DGN07_05910 PF00109 Beta-ketoacyl synthase, N-terminal domain DGN07_05910 PF02801 Beta-ketoacyl synthase, C-terminal domain DGN07_05915 PF04715 Anthranilate synthase component I, N terminal region DGN07_05915 PF00425 chorismate binding enzyme DGN07_05920 PF02618 YceG-like family DGN07_05925 PF09115 DNA polymerase III, delta subunit, C terminal DGN07_05945 PF02954 Bacterial regulatory protein, Fis family DGN07_05945 PF06506 Propionate catabolism activator DGN07_05945 PF00158 Sigma-54 interaction domain DGN07_05955 PF00285 Citrate synthase, C-terminal domain DGN07_05960 PF00330 Aconitase family (aconitate hydratase) DGN07_05960 PF00694 Aconitase C-terminal domain DGN07_05970 PF04303 PrpF protein DGN07_05975 PF07715 TonB-dependent Receptor Plug Domain DGN07_05975 PF00593 TonB dependent receptor DGN07_05990 PF01835 MG2 domain DGN07_05990 PF17962 Bacterial macroglobulin domain 6 DGN07_05990 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain DGN07_05990 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain DGN07_05990 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain DGN07_05990 PF07703 Alpha-2-macroglobulin bait region domain DGN07_05990 PF00207 Alpha-2-macroglobulin family DGN07_05990 PF11974 Bacterial alpha-2-macroglobulin MG3 domain DGN07_06010 PF00912 Transglycosylase DGN07_06010 PF06832 Penicillin-Binding Protein C-terminus Family DGN07_06010 PF00905 Penicillin binding protein transpeptidase domain DGN07_06020 PF08534 Redoxin DGN07_06030 PF01556 DnaJ C terminal domain DGN07_06030 PF00226 DnaJ domain DGN07_06035 PF00072 Response regulator receiver domain DGN07_06040 PF12221 Bacterial membrane protein N terminal DGN07_06040 PF01145 SPFH domain / Band 7 family DGN07_06045 PF01145 SPFH domain / Band 7 family DGN07_06065 PF00709 Adenylosuccinate synthetase DGN07_06080 PF00440 Bacterial regulatory proteins, tetR family DGN07_06125 PF02384 N-6 DNA Methylase DGN07_06140 PF01609 Transposase DDE domain DGN07_06140 PF05598 Transposase domain (DUF772) DGN07_06145 PF01420 Type I restriction modification DNA specificity domain DGN07_06160 PF11867 Domain of unknown function (DUF3387) DGN07_06160 PF18766 SWI2/SNF2 ATPase DGN07_06160 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DGN07_06190 PF13456 Reverse transcriptase-like DGN07_06190 PF00300 Histidine phosphatase superfamily (branch 1) DGN07_06195 PF01256 Carbohydrate kinase DGN07_06210 PF00723 Glycosyl hydrolases family 15 DGN07_06225 PF17678 Glycosyl hydrolase family 92 N-terminal domain DGN07_06225 PF07971 Glycosyl hydrolase family 92 DGN07_06230 PF00106 short chain dehydrogenase DGN07_06245 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGN07_06270 PF17755 UvrA DNA-binding domain DGN07_06280 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DGN07_06280 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DGN07_06285 PF03450 CO dehydrogenase flavoprotein C-terminal domain DGN07_06285 PF00941 FAD binding domain in molybdopterin dehydrogenase DGN07_06290 PF00111 2Fe-2S iron-sulfur cluster binding domain DGN07_06290 PF01799 [2Fe-2S] binding domain DGN07_06325 PF01726 LexA DNA binding domain DGN07_06325 PF00717 Peptidase S24-like DGN07_06340 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DGN07_06340 PF07733 Bacterial DNA polymerase III alpha NTPase domain DGN07_06340 PF14579 Helix-hairpin-helix motif DGN07_06340 PF02811 PHP domain DGN07_06355 PF03169 OPT oligopeptide transporter protein DGN07_06370 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region DGN07_06370 PF00326 Prolyl oligopeptidase family DGN07_06370 PF07676 WD40-like Beta Propeller Repeat DGN07_06385 PF12833 Helix-turn-helix domain DGN07_06385 PF02311 AraC-like ligand binding domain DGN07_06415 PF18011 C-terminal domain found in long catalases DGN07_06415 PF06628 Catalase-related immune-responsive DGN07_06415 PF00199 Catalase DGN07_06420 PF00248 Aldo/keto reductase family DGN07_06425 PF00135 Carboxylesterase family DGN07_06430 PF02347 Glycine cleavage system P-protein DGN07_06435 PF07690 Major Facilitator Superfamily DGN07_06450 PF08019 Phosphoethanolamine transferase EptA/EptB DGN07_06450 PF00884 Sulfatase DGN07_06465 PF00486 Transcriptional regulatory protein, C terminal DGN07_06465 PF00072 Response regulator receiver domain DGN07_06470 PF00512 His Kinase A (phospho-acceptor) domain DGN07_06470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_06470 PF08521 Two-component sensor kinase N-terminal DGN07_06480 PF03776 Septum formation topological specificity factor MinE DGN07_06485 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DGN07_06490 PF03775 Septum formation inhibitor MinC, C-terminal domain DGN07_06490 PF05209 Septum formation inhibitor MinC, N-terminal domain DGN07_06505 PF07730 Histidine kinase DGN07_06510 PF00072 Response regulator receiver domain DGN07_06510 PF00196 Bacterial regulatory proteins, luxR family DGN07_06525 PF00730 HhH-GPD superfamily base excision DNA repair protein DGN07_06555 PF02222 ATP-grasp domain DGN07_06565 PF04377 Arginine-tRNA-protein transferase, C terminus DGN07_06565 PF04376 Arginine-tRNA-protein transferase, N terminus DGN07_06590 PF00378 Enoyl-CoA hydratase/isomerase DGN07_06605 PF17755 UvrA DNA-binding domain DGN07_06605 PF00005 ABC transporter DGN07_06605 PF17760 UvrA interaction domain DGN07_06610 PF00829 Ribosomal prokaryotic L21 protein DGN07_06615 PF01016 Ribosomal L27 protein DGN07_06620 PF01018 GTP1/OBG DGN07_06620 PF01926 50S ribosome-binding GTPase DGN07_06625 PF01649 Ribosomal protein S20 DGN07_06630 PF03023 Lipid II flippase MurJ DGN07_06635 PF01687 Riboflavin kinase DGN07_06635 PF06574 FAD synthetase DGN07_06640 PF08264 Anticodon-binding domain of tRNA DGN07_06640 PF06827 Zinc finger found in FPG and IleRS DGN07_06640 PF00133 tRNA synthetases class I (I, L, M and V) DGN07_06645 PF01252 Signal peptidase (SPase) II DGN07_06650 PF02401 LytB protein DGN07_06680 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DGN07_06680 PF06481 COX Aromatic Rich Motif DGN07_06685 PF00115 Cytochrome C and Quinol oxidase polypeptide I DGN07_06690 PF00510 Cytochrome c oxidase subunit III DGN07_06695 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DGN07_06705 PF18073 Rubredoxin metal binding domain DGN07_06710 PF00872 Transposase, Mutator family DGN07_06715 PF05656 Protein of unknown function (DUF805) DGN07_06725 PF12833 Helix-turn-helix domain DGN07_06730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_06730 PF00183 Hsp90 protein DGN07_06740 PF08678 Rsbr N terminal DGN07_06740 PF01740 STAS domain DGN07_06745 PF01740 STAS domain DGN07_06750 PF13581 Histidine kinase-like ATPase domain DGN07_06760 PF00072 Response regulator receiver domain DGN07_06760 PF00512 His Kinase A (phospho-acceptor) domain DGN07_06760 PF00672 HAMP domain DGN07_06760 PF17149 Periplasmic sensor domain found in signal transduction proteins DGN07_06760 PF01627 Hpt domain DGN07_06760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_06765 PF00072 Response regulator receiver domain DGN07_06765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_06765 PF00512 His Kinase A (phospho-acceptor) domain DGN07_06765 PF08448 PAS fold DGN07_06765 PF13188 PAS domain DGN07_06775 PF07715 TonB-dependent Receptor Plug Domain DGN07_06775 PF00593 TonB dependent receptor DGN07_06780 PF00085 Thioredoxin DGN07_06785 PF07237 Protein of unknown function (DUF1428) DGN07_06795 PF13492 GAF domain DGN07_06795 PF02702 Osmosensitive K+ channel His kinase sensor domain DGN07_06795 PF00512 His Kinase A (phospho-acceptor) domain DGN07_06795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_06795 PF13493 Domain of unknown function (DUF4118) DGN07_06800 PF01339 CheB methylesterase DGN07_06805 PF01739 CheR methyltransferase, SAM binding domain DGN07_06805 PF03705 CheR methyltransferase, all-alpha domain DGN07_06810 PF00072 Response regulator receiver domain DGN07_06810 PF00672 HAMP domain DGN07_06810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_06810 PF00512 His Kinase A (phospho-acceptor) domain DGN07_06810 PF01627 Hpt domain DGN07_06810 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DGN07_06815 PF00072 Response regulator receiver domain DGN07_06815 PF13426 PAS domain DGN07_06815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_06820 PF00072 Response regulator receiver domain DGN07_06830 PF06964 Alpha-L-arabinofuranosidase C-terminal domain DGN07_06835 PF01263 Aldose 1-epimerase DGN07_06840 PF01578 Cytochrome C assembly protein DGN07_06845 PF00448 SRP54-type protein, GTPase domain DGN07_06845 PF02881 SRP54-type protein, helical bundle domain DGN07_06845 PF02978 Signal peptide binding domain DGN07_06850 PF03060 Nitronate monooxygenase DGN07_06860 PF00886 Ribosomal protein S16 DGN07_06865 PF05239 PRC-barrel domain DGN07_06865 PF01782 RimM N-terminal domain DGN07_06870 PF01746 tRNA (Guanine-1)-methyltransferase DGN07_06875 PF01245 Ribosomal protein L19 DGN07_06880 PF01554 MatE DGN07_06900 PF01479 S4 domain DGN07_06905 PF00141 Peroxidase DGN07_06915 PF00488 MutS domain V DGN07_06915 PF05190 MutS family domain IV DGN07_06915 PF05192 MutS domain III DGN07_06915 PF05188 MutS domain II DGN07_06915 PF01624 MutS domain I DGN07_06925 PF00872 Transposase, Mutator family DGN07_06940 PF01609 Transposase DDE domain DGN07_06940 PF05598 Transposase domain (DUF772) DGN07_06950 PF00872 Transposase, Mutator family DGN07_06955 PF01527 Transposase DGN07_06975 PF02837 Glycosyl hydrolases family 2, sugar binding domain DGN07_06975 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DGN07_06975 PF00703 Glycosyl hydrolases family 2 DGN07_06975 PF13287 Fn3 associated DGN07_06975 PF16355 Domain of unknown function (DUF4982) DGN07_06980 PF07745 Glycosyl hydrolase family 53 DGN07_06990 PF09856 Predicted transcriptional regulator (DUF2083) DGN07_06990 PF06114 IrrE N-terminal-like domain DGN07_06990 PF01381 Helix-turn-helix DGN07_06995 PF00171 Aldehyde dehydrogenase family DGN07_07000 PF02770 Acyl-CoA dehydrogenase, middle domain DGN07_07000 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DGN07_07000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DGN07_07005 PF00378 Enoyl-CoA hydratase/isomerase DGN07_07010 PF00378 Enoyl-CoA hydratase/isomerase DGN07_07010 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DGN07_07010 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DGN07_07015 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DGN07_07015 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DGN07_07020 PF01545 Cation efflux family DGN07_07025 PF00872 Transposase, Mutator family DGN07_07030 PF01609 Transposase DDE domain DGN07_07030 PF05598 Transposase domain (DUF772) DGN07_07035 PF01609 Transposase DDE domain DGN07_07035 PF05598 Transposase domain (DUF772) DGN07_07040 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DGN07_07040 PF00378 Enoyl-CoA hydratase/isomerase DGN07_07040 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DGN07_07045 PF08281 Sigma-70, region 4 DGN07_07045 PF04542 Sigma-70 region 2 DGN07_07055 PF13180 PDZ domain DGN07_07060 PF00009 Elongation factor Tu GTP binding domain DGN07_07060 PF03144 Elongation factor Tu domain 2 DGN07_07060 PF00679 Elongation factor G C-terminus DGN07_07060 PF06421 GTP-binding protein LepA C-terminus DGN07_07065 PF10502 Signal peptidase, peptidase S26 DGN07_07075 PF00035 Double-stranded RNA binding motif DGN07_07075 PF14622 Ribonuclease-III-like DGN07_07080 PF01926 50S ribosome-binding GTPase DGN07_07080 PF07650 KH domain DGN07_07085 PF11967 Recombination protein O N terminal DGN07_07085 PF02565 Recombination protein O C terminal DGN07_07095 PF05958 tRNA (Uracil-5-)-methyltransferase DGN07_07100 PF01928 CYTH domain DGN07_07105 PF01323 DSBA-like thioredoxin domain DGN07_07110 PF01593 Flavin containing amine oxidoreductase DGN07_07115 PF04244 Deoxyribodipyrimidine photo-lyase-related protein DGN07_07120 PF00933 Glycosyl hydrolase family 3 N terminal domain DGN07_07125 PF00156 Phosphoribosyl transferase domain DGN07_07130 PF01048 Phosphorylase superfamily DGN07_07135 PF00313 'Cold-shock' DNA-binding domain DGN07_07140 PF01494 FAD binding domain DGN07_07150 PF00270 DEAD/DEAH box helicase DGN07_07150 PF08494 DEAD/H associated DGN07_07150 PF00271 Helicase conserved C-terminal domain DGN07_07155 PF04679 ATP dependent DNA ligase C terminal region DGN07_07155 PF01068 ATP dependent DNA ligase domain DGN07_07155 PF04675 DNA ligase N terminus DGN07_07165 PF01068 ATP dependent DNA ligase domain DGN07_07165 PF04675 DNA ligase N terminus DGN07_07165 PF04679 ATP dependent DNA ligase C terminal region DGN07_07180 PF00072 Response regulator receiver domain DGN07_07180 PF00990 Diguanylate cyclase, GGDEF domain DGN07_07195 PF02803 Thiolase, C-terminal domain DGN07_07195 PF00108 Thiolase, N-terminal domain DGN07_07200 PF03797 Autotransporter beta-domain DGN07_07200 PF12951 Passenger-associated-transport-repeat DGN07_07200 PF00082 Subtilase family DGN07_07205 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DGN07_07205 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DGN07_07220 PF01863 Protein of unknown function DUF45 DGN07_07225 PF07043 Protein of unknown function (DUF1328) DGN07_07235 PF01258 Prokaryotic dksA/traR C4-type zinc finger DGN07_07255 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DGN07_07265 PF03831 PhnA domain DGN07_07265 PF08274 PhnA Zinc-Ribbon DGN07_07275 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DGN07_07280 PF07690 Major Facilitator Superfamily DGN07_07315 PF03706 Lysylphosphatidylglycerol synthase TM region DGN07_07315 PF09924 Uncharacterised conserved protein (DUF2156) DGN07_07325 PF01042 Endoribonuclease L-PSP DGN07_07370 PF04545 Sigma-70, region 4 DGN07_07370 PF04542 Sigma-70 region 2 DGN07_07395 PF04060 Putative Fe-S cluster DGN07_07405 PF09334 tRNA synthetases class I (M) DGN07_07405 PF01588 Putative tRNA binding domain DGN07_07420 PF00589 Phage integrase family DGN07_07420 PF13356 Arm DNA-binding domain DGN07_07440 PF00872 Transposase, Mutator family DGN07_07470 PF07820 TraC-like protein DGN07_07490 PF00872 Transposase, Mutator family DGN07_07505 PF00005 ABC transporter DGN07_07505 PF13732 Domain of unknown function (DUF4162) DGN07_07510 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DGN07_07515 PF00324 Amino acid permease DGN07_07520 PF02574 Homocysteine S-methyltransferase DGN07_07530 PF02592 Putative vitamin uptake transporter DGN07_07560 PF03551 Transcriptional regulator PadR-like family DGN07_07580 PF03653 Uncharacterised protein family (UPF0093) DGN07_07595 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DGN07_07600 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DGN07_07600 PF02811 PHP domain DGN07_07600 PF01336 OB-fold nucleic acid binding domain DGN07_07600 PF14579 Helix-hairpin-helix motif DGN07_07600 PF07733 Bacterial DNA polymerase III alpha NTPase domain DGN07_07605 PF01351 Ribonuclease HII DGN07_07610 PF02684 Lipid-A-disaccharide synthetase DGN07_07615 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DGN07_07615 PF00132 Bacterial transferase hexapeptide (six repeats) DGN07_07620 PF07977 FabA-like domain DGN07_07625 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DGN07_07625 PF00132 Bacterial transferase hexapeptide (six repeats) DGN07_07635 PF07244 Surface antigen variable number repeat DGN07_07635 PF01103 Surface antigen DGN07_07640 PF02163 Peptidase family M50 DGN07_07640 PF17820 PDZ domain DGN07_07645 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DGN07_07645 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DGN07_07645 PF13288 DXP reductoisomerase C-terminal domain DGN07_07655 PF01255 Putative undecaprenyl diphosphate synthase DGN07_07660 PF01765 Ribosome recycling factor DGN07_07665 PF00696 Amino acid kinase family DGN07_07670 PF00990 Diguanylate cyclase, GGDEF domain DGN07_07670 PF00072 Response regulator receiver domain DGN07_07675 PF00889 Elongation factor TS DGN07_07680 PF00318 Ribosomal protein S2 DGN07_07715 PF00557 Metallopeptidase family M24 DGN07_07720 PF01966 HD domain DGN07_07720 PF08335 GlnD PII-uridylyltransferase DGN07_07720 PF01909 Nucleotidyltransferase domain DGN07_07725 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal DGN07_07725 PF00132 Bacterial transferase hexapeptide (six repeats) DGN07_07725 PF14602 Hexapeptide repeat of succinyl-transferase DGN07_07730 PF03960 ArsC family DGN07_07735 PF07687 Peptidase dimerisation domain DGN07_07735 PF01546 Peptidase family M20/M25/M40 DGN07_07740 PF13537 Glutamine amidotransferase domain DGN07_07740 PF00733 Asparagine synthase DGN07_07750 PF00593 TonB dependent receptor DGN07_07750 PF07715 TonB-dependent Receptor Plug Domain DGN07_07760 PF00210 Ferritin-like domain DGN07_07765 PF05724 Thiopurine S-methyltransferase (TPMT) DGN07_07770 PF00521 DNA gyrase/topoisomerase IV, subunit A DGN07_07770 PF03989 DNA gyrase C-terminal domain, beta-propeller DGN07_07785 PF02321 Outer membrane efflux protein DGN07_07790 PF00529 HlyD membrane-fusion protein of T1SS DGN07_07790 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGN07_07795 PF07690 Major Facilitator Superfamily DGN07_07805 PF01915 Glycosyl hydrolase family 3 C-terminal domain DGN07_07805 PF14310 Fibronectin type III-like domain DGN07_07805 PF00933 Glycosyl hydrolase family 3 N terminal domain DGN07_07815 PF00854 POT family DGN07_07840 PF12802 MarR family DGN07_07845 PF01432 Peptidase family M3 DGN07_07855 PF00255 Glutathione peroxidase DGN07_07860 PF00970 Oxidoreductase FAD-binding domain DGN07_07860 PF00175 Oxidoreductase NAD-binding domain DGN07_07865 PF00005 ABC transporter DGN07_07870 PF05681 Fumarate hydratase (Fumerase) DGN07_07870 PF05683 Fumarase C-terminus DGN07_07880 PF00484 Carbonic anhydrase DGN07_07885 PF02253 Phospholipase A1 DGN07_07895 PF00313 'Cold-shock' DNA-binding domain DGN07_07910 PF00899 ThiF family DGN07_07915 PF01026 TatD related DNase DGN07_07930 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DGN07_07930 PF02770 Acyl-CoA dehydrogenase, middle domain DGN07_07930 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DGN07_07940 PF02798 Glutathione S-transferase, N-terminal domain DGN07_07940 PF00043 Glutathione S-transferase, C-terminal domain DGN07_07950 PF13537 Glutamine amidotransferase domain DGN07_07950 PF00733 Asparagine synthase DGN07_07955 PF03358 NADPH-dependent FMN reductase DGN07_07960 PF03796 DnaB-like helicase C terminal domain DGN07_07960 PF00772 DnaB-like helicase N terminal domain DGN07_07965 PF03441 FAD binding domain of DNA photolyase DGN07_07965 PF00875 DNA photolyase DGN07_07970 PF00691 OmpA family DGN07_07970 PF05736 OprF membrane domain DGN07_07975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN07_07975 PF03466 LysR substrate binding domain DGN07_07990 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGN07_07995 PF00873 AcrB/AcrD/AcrF family DGN07_08000 PF00106 short chain dehydrogenase DGN07_08005 PF02321 Outer membrane efflux protein DGN07_08010 PF00990 Diguanylate cyclase, GGDEF domain DGN07_08020 PF00990 Diguanylate cyclase, GGDEF domain DGN07_08050 PF00872 Transposase, Mutator family DGN07_08055 PF13356 Arm DNA-binding domain DGN07_08055 PF00589 Phage integrase family DGN07_08070 PF01668 SmpB protein DGN07_08075 PF03364 Polyketide cyclase / dehydrase and lipid transport DGN07_08080 PF03658 RnfH family Ubiquitin DGN07_08085 PF04355 SmpA / OmlA family DGN07_08090 PF01475 Ferric uptake regulator family DGN07_08095 PF02463 RecF/RecN/SMC N terminal domain DGN07_08100 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding DGN07_08100 PF01628 HrcA protein C terminal domain DGN07_08105 PF01025 GrpE DGN07_08110 PF00012 Hsp70 protein DGN07_08115 PF00684 DnaJ central domain DGN07_08115 PF01556 DnaJ C terminal domain DGN07_08115 PF00226 DnaJ domain DGN07_08125 PF08543 Phosphomethylpyrimidine kinase DGN07_08150 PF03412 Peptidase C39 family DGN07_08150 PF00664 ABC transporter transmembrane region DGN07_08150 PF00005 ABC transporter DGN07_08155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN07_08155 PF03466 LysR substrate binding domain DGN07_08160 PF00005 ABC transporter DGN07_08160 PF00664 ABC transporter transmembrane region DGN07_08165 PF01205 Uncharacterized protein family UPF0029 DGN07_08170 PF03641 Possible lysine decarboxylase DGN07_08175 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGN07_08175 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DGN07_08180 PF02817 e3 binding domain DGN07_08180 PF00364 Biotin-requiring enzyme DGN07_08180 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DGN07_08185 PF16870 2-oxoglutarate dehydrogenase C-terminal DGN07_08185 PF00676 Dehydrogenase E1 component DGN07_08185 PF16078 2-oxoglutarate dehydrogenase N-terminus DGN07_08185 PF02779 Transketolase, pyrimidine binding domain DGN07_08195 PF08007 Cupin superfamily protein DGN07_08210 PF08328 Adenylosuccinate lyase C-terminal DGN07_08210 PF00206 Lyase DGN07_08220 PF03471 Transporter associated domain DGN07_08220 PF01595 Cyclin M transmembrane N-terminal domain DGN07_08220 PF00571 CBS domain DGN07_08225 PF10415 Fumarase C C-terminus DGN07_08225 PF00206 Lyase DGN07_08255 PF00005 ABC transporter DGN07_08260 PF00392 Bacterial regulatory proteins, gntR family DGN07_08270 PF00255 Glutathione peroxidase DGN07_08275 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DGN07_08275 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DGN07_08280 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DGN07_08280 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DGN07_08280 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DGN07_08285 PF04102 SlyX DGN07_08300 PF00356 Bacterial regulatory proteins, lacI family DGN07_08305 PF07690 Major Facilitator Superfamily DGN07_08310 PF00294 pfkB family carbohydrate kinase DGN07_08320 PF02607 B12 binding domain DGN07_08320 PF02965 Vitamin B12 dependent methionine synthase, activation domain DGN07_08320 PF00809 Pterin binding enzyme DGN07_08320 PF02574 Homocysteine S-methyltransferase DGN07_08320 PF02310 B12 binding domain DGN07_08325 PF00809 Pterin binding enzyme DGN07_08325 PF02574 Homocysteine S-methyltransferase DGN07_08330 PF01209 ubiE/COQ5 methyltransferase family DGN07_08335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DGN07_08335 PF02770 Acyl-CoA dehydrogenase, middle domain DGN07_08335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DGN07_08345 PF02770 Acyl-CoA dehydrogenase, middle domain DGN07_08345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DGN07_08345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DGN07_08365 PF00575 S1 RNA binding domain DGN07_08365 PF17876 Cold shock domain DGN07_08365 PF08206 Ribonuclease B OB domain DGN07_08365 PF00773 RNB domain DGN07_08365 PF08461 Ribonuclease R winged-helix domain DGN07_08375 PF00588 SpoU rRNA Methylase family DGN07_08375 PF08032 RNA 2'-O ribose methyltransferase substrate binding DGN07_08385 PF00929 Exonuclease DGN07_08395 PF01895 PhoU domain DGN07_08400 PF00005 ABC transporter DGN07_08405 PF00528 Binding-protein-dependent transport system inner membrane component DGN07_08410 PF00528 Binding-protein-dependent transport system inner membrane component DGN07_08415 PF12849 PBP superfamily domain DGN07_08420 PF12849 PBP superfamily domain DGN07_08435 PF00484 Carbonic anhydrase DGN07_08440 PF01740 STAS domain DGN07_08440 PF00916 Sulfate permease family DGN07_08445 PF00730 HhH-GPD superfamily base excision DNA repair protein DGN07_08445 PF00633 Helix-hairpin-helix motif DGN07_08445 PF10576 Iron-sulfur binding domain of endonuclease III DGN07_08455 PF00378 Enoyl-CoA hydratase/isomerase DGN07_08460 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DGN07_08460 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DGN07_08465 PF00293 NUDIX domain DGN07_08470 PF00581 Rhodanese-like domain DGN07_08500 PF12848 ABC transporter DGN07_08500 PF00005 ABC transporter DGN07_08500 PF16326 ABC transporter C-terminal domain DGN07_08510 PF01170 Putative RNA methylase family UPF0020 DGN07_08510 PF10672 S-adenosylmethionine-dependent methyltransferase DGN07_08510 PF02926 THUMP domain DGN07_08515 PF01513 ATP-NAD kinase DGN07_08540 PF00929 Exonuclease DGN07_08540 PF08411 Exonuclease C-terminal DGN07_08545 PF01494 FAD binding domain DGN07_08550 PF00266 Aminotransferase class-V DGN07_08560 PF06052 3-hydroxyanthranilic acid dioxygenase DGN07_08565 PF00484 Carbonic anhydrase DGN07_08610 PF00072 Response regulator receiver domain DGN07_08610 PF00196 Bacterial regulatory proteins, luxR family DGN07_08660 PF01336 OB-fold nucleic acid binding domain DGN07_08660 PF00152 tRNA synthetases class II (D, K and N) DGN07_08670 PF01521 Iron-sulphur cluster biosynthesis DGN07_08675 PF01250 Ribosomal protein S6 DGN07_08680 PF01084 Ribosomal protein S18 DGN07_08685 PF03948 Ribosomal protein L9, C-terminal domain DGN07_08685 PF01281 Ribosomal protein L9, N-terminal domain DGN07_08695 PF02463 RecF/RecN/SMC N terminal domain DGN07_08700 PF04354 ZipA, C-terminal FtsZ-binding domain DGN07_08710 PF00155 Aminotransferase class I and II DGN07_08715 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DGN07_08715 PF12826 Helix-hairpin-helix motif DGN07_08715 PF03120 NAD-dependent DNA ligase OB-fold domain DGN07_08715 PF00533 BRCA1 C Terminus (BRCT) domain DGN07_08715 PF01653 NAD-dependent DNA ligase adenylation domain DGN07_08720 PF00152 tRNA synthetases class II (D, K and N) DGN07_08735 PF01008 Initiation factor 2 subunit family DGN07_08740 PF03989 DNA gyrase C-terminal domain, beta-propeller DGN07_08740 PF00521 DNA gyrase/topoisomerase IV, subunit A DGN07_08745 PF13360 PQQ-like domain DGN07_08760 PF17391 Urocanase N-terminal domain DGN07_08760 PF01175 Urocanase Rossmann-like domain DGN07_08760 PF17392 Urocanase C-terminal domain DGN07_08770 PF00221 Aromatic amino acid lyase DGN07_08775 PF07969 Amidohydrolase family DGN07_08790 PF00392 Bacterial regulatory proteins, gntR family DGN07_08790 PF07702 UTRA domain DGN07_08815 PF01794 Ferric reductase like transmembrane component DGN07_08820 PF00174 Oxidoreductase molybdopterin binding domain DGN07_08825 PF00266 Aminotransferase class-V DGN07_08830 PF01842 ACT domain DGN07_08830 PF01817 Chorismate mutase type II DGN07_08830 PF00800 Prephenate dehydratase DGN07_08835 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DGN07_08850 PF03544 Gram-negative bacterial TonB protein C-terminal DGN07_08855 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DGN07_08855 PF02403 Seryl-tRNA synthetase N-terminal domain DGN07_08860 PF02525 Flavodoxin-like fold DGN07_08865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN07_08865 PF03466 LysR substrate binding domain DGN07_08880 PF01609 Transposase DDE domain DGN07_08880 PF05598 Transposase domain (DUF772) DGN07_08885 PF00872 Transposase, Mutator family DGN07_08890 PF00872 Transposase, Mutator family DGN07_08900 PF02203 Tar ligand binding domain homologue DGN07_08900 PF00672 HAMP domain DGN07_08900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN07_08905 PF01494 FAD binding domain DGN07_08920 PF00072 Response regulator receiver domain DGN07_08920 PF13188 PAS domain DGN07_08920 PF08448 PAS fold DGN07_08920 PF00512 His Kinase A (phospho-acceptor) domain DGN07_08920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_08925 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DGN07_08925 PF00672 HAMP domain DGN07_08925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_08925 PF00512 His Kinase A (phospho-acceptor) domain DGN07_08925 PF01627 Hpt domain DGN07_08925 PF00072 Response regulator receiver domain DGN07_08935 PF06745 KaiC DGN07_08940 PF00072 Response regulator receiver domain DGN07_08940 PF13426 PAS domain DGN07_08940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_08950 PF03918 Cytochrome C biogenesis protein DGN07_08955 PF08534 Redoxin DGN07_08960 PF01578 Cytochrome C assembly protein DGN07_08960 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DGN07_08965 PF03100 CcmE DGN07_08970 PF04995 Heme exporter protein D (CcmD) DGN07_08975 PF01578 Cytochrome C assembly protein DGN07_08980 PF00082 Subtilase family DGN07_08990 PF08281 Sigma-70, region 4 DGN07_08990 PF04542 Sigma-70 region 2 DGN07_09005 PF00034 Cytochrome c DGN07_09020 PF05523 WxcM-like, C-terminal DGN07_09040 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DGN07_09045 PF01943 Polysaccharide biosynthesis protein DGN07_09050 PF00535 Glycosyl transferase family 2 DGN07_09065 PF08241 Methyltransferase domain DGN07_09100 PF00005 ABC transporter DGN07_09105 PF00664 ABC transporter transmembrane region DGN07_09105 PF00005 ABC transporter DGN07_09110 PF00083 Sugar (and other) transporter DGN07_09120 PF00296 Luciferase-like monooxygenase DGN07_09130 PF00571 CBS domain DGN07_09130 PF01595 Cyclin M transmembrane N-terminal domain DGN07_09130 PF03471 Transporter associated domain DGN07_09145 PF01384 Phosphate transporter family DGN07_09165 PF00986 DNA gyrase B subunit, carboxyl terminus DGN07_09165 PF01751 Toprim domain DGN07_09165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_09165 PF00204 DNA gyrase B DGN07_09175 PF00117 Glutamine amidotransferase class-I DGN07_09175 PF06418 CTP synthase N-terminus DGN07_09180 PF00793 DAHP synthetase I family DGN07_09190 PF03952 Enolase, N-terminal domain DGN07_09190 PF00113 Enolase, C-terminal TIM barrel domain DGN07_09195 PF04977 Septum formation initiator DGN07_09200 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DGN07_09205 PF02542 YgbB family DGN07_09210 PF01142 tRNA pseudouridine synthase D (TruD) DGN07_09215 PF01713 Smr domain DGN07_09220 PF01975 Survival protein SurE DGN07_09230 PF09335 SNARE associated Golgi protein DGN07_09235 PF01551 Peptidase family M23 DGN07_09235 PF01476 LysM domain DGN07_09240 PF04430 Protein of unknown function (DUF498/DUF598) DGN07_09245 PF01985 CRS1 / YhbY (CRM) domain DGN07_09250 PF01728 FtsJ-like methyltransferase DGN07_09255 PF00004 ATPase family associated with various cellular activities (AAA) DGN07_09255 PF17862 AAA+ lid domain DGN07_09255 PF06480 FtsH Extracellular DGN07_09255 PF01434 Peptidase family M41 DGN07_09260 PF00809 Pterin binding enzyme DGN07_09270 PF17209 Hfq protein DGN07_09275 PF01926 50S ribosome-binding GTPase DGN07_09275 PF16360 GTP-binding GTPase Middle Region DGN07_09275 PF13167 GTP-binding GTPase N-terminal DGN07_09280 PF02464 Competence-damaged protein DGN07_09285 PF03109 ABC1 family DGN07_09290 PF00717 Peptidase S24-like DGN07_09290 PF01726 LexA DNA binding domain DGN07_09295 PF00154 recA bacterial DNA recombination protein DGN07_09305 PF02631 RecX family DGN07_09310 PF02272 DHHA1 domain DGN07_09310 PF01411 tRNA synthetases class II (A) DGN07_09310 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DGN07_09315 PF02599 Global regulator protein family DGN07_09330 PF13426 PAS domain DGN07_09330 PF08447 PAS fold DGN07_09330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN07_09335 PF02678 Pirin DGN07_09335 PF17954 Quercetinase C-terminal cupin domain DGN07_09340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN07_09340 PF03466 LysR substrate binding domain DGN07_09365 PF08543 Phosphomethylpyrimidine kinase DGN07_09380 PF02562 PhoH-like protein DGN07_09380 PF13638 PIN domain DGN07_09385 PF00578 AhpC/TSA family DGN07_09400 PF00701 Dihydrodipicolinate synthetase family DGN07_09410 PF00037 4Fe-4S binding domain DGN07_09410 PF11953 Domain of unknown function (DUF3470) DGN07_09415 PF05035 2-keto-3-deoxy-galactonokinase DGN07_09420 PF08450 SMP-30/Gluconolactonase/LRE-like region DGN07_09425 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DGN07_09425 PF13378 Enolase C-terminal domain-like DGN07_09430 PF01081 KDPG and KHG aldolase DGN07_09440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN07_09440 PF03466 LysR substrate binding domain DGN07_09455 PF03442 Carbohydrate binding domain X2 DGN07_09455 PF00942 Cellulose binding domain DGN07_09465 PF02449 Beta-galactosidase DGN07_09465 PF08532 Beta-galactosidase trimerisation domain DGN07_09465 PF08533 Beta-galactosidase C-terminal domain DGN07_09470 PF16338 Domain of unknown function (DUF4968) DGN07_09470 PF17137 Domain of unknown function (DUF5110) DGN07_09470 PF01055 Glycosyl hydrolases family 31 DGN07_09480 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DGN07_09480 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DGN07_09490 PF00872 Transposase, Mutator family DGN07_09510 PF00872 Transposase, Mutator family DGN07_09540 PF01609 Transposase DDE domain DGN07_09540 PF05598 Transposase domain (DUF772) DGN07_09550 PF01520 N-acetylmuramoyl-L-alanine amidase DGN07_09555 PF02649 Type I GTP cyclohydrolase folE2 DGN07_09565 PF12627 Probable RNA and SrmB- binding site of polymerase A DGN07_09565 PF01743 Poly A polymerase head domain DGN07_09565 PF12626 Polymerase A arginine-rich C-terminus DGN07_09570 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DGN07_09575 PF02548 Ketopantoate hydroxymethyltransferase DGN07_09580 PF02569 Pantoate-beta-alanine ligase DGN07_09585 PF02261 Aspartate decarboxylase DGN07_09590 PF00342 Phosphoglucose isomerase DGN07_09610 PF14310 Fibronectin type III-like domain DGN07_09610 PF01915 Glycosyl hydrolase family 3 C-terminal domain DGN07_09610 PF00933 Glycosyl hydrolase family 3 N terminal domain DGN07_09620 PF00474 Sodium:solute symporter family DGN07_09625 PF00563 EAL domain DGN07_09625 PF01590 GAF domain DGN07_09625 PF00990 Diguanylate cyclase, GGDEF domain DGN07_09625 PF00360 Phytochrome region DGN07_09635 PF00072 Response regulator receiver domain DGN07_09645 PF04551 GcpE protein DGN07_09665 PF01177 Asp/Glu/Hydantoin racemase DGN07_09675 PF00892 EamA-like transporter family DGN07_09680 PF01565 FAD binding domain DGN07_09680 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DGN07_09685 PF01180 Dihydroorotate dehydrogenase DGN07_09700 PF00171 Aldehyde dehydrogenase family DGN07_09725 PF00872 Transposase, Mutator family DGN07_09745 PF00872 Transposase, Mutator family DGN07_09780 PF06114 IrrE N-terminal-like domain DGN07_09810 PF00535 Glycosyl transferase family 2 DGN07_09815 PF00872 Transposase, Mutator family DGN07_09830 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB DGN07_09830 PF17287 POTRA domain DGN07_09830 PF08479 POTRA domain, ShlB-type DGN07_09835 PF01609 Transposase DDE domain DGN07_09835 PF05598 Transposase domain (DUF772) DGN07_09865 PF01609 Transposase DDE domain DGN07_09865 PF05598 Transposase domain (DUF772) DGN07_09895 PF01609 Transposase DDE domain DGN07_09895 PF05598 Transposase domain (DUF772) DGN07_09905 PF00872 Transposase, Mutator family DGN07_09915 PF03073 TspO/MBR family DGN07_09920 PF03447 Homoserine dehydrogenase, NAD binding domain DGN07_09920 PF00696 Amino acid kinase family DGN07_09920 PF01842 ACT domain DGN07_09920 PF13840 ACT domain DGN07_09920 PF00742 Homoserine dehydrogenase DGN07_09925 PF00288 GHMP kinases N terminal domain DGN07_09925 PF08544 GHMP kinases C terminal DGN07_09935 PF00291 Pyridoxal-phosphate dependent enzyme DGN07_09935 PF14821 Threonine synthase N terminus DGN07_09945 PF00027 Cyclic nucleotide-binding domain DGN07_09945 PF13545 Crp-like helix-turn-helix domain DGN07_09950 PF13393 Histidyl-tRNA synthetase DGN07_09950 PF03129 Anticodon binding domain DGN07_09960 PF01634 ATP phosphoribosyltransferase DGN07_09960 PF08029 HisG, C-terminal domain DGN07_09965 PF00815 Histidinol dehydrogenase DGN07_09970 PF00155 Aminotransferase class I and II DGN07_09975 PF00475 Imidazoleglycerol-phosphate dehydratase DGN07_09980 PF00117 Glutamine amidotransferase class-I DGN07_09985 PF00977 Histidine biosynthesis protein DGN07_09990 PF00977 Histidine biosynthesis protein DGN07_09995 PF01502 Phosphoribosyl-AMP cyclohydrolase DGN07_09995 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DGN07_10015 PF03079 ARD/ARD' family DGN07_10020 PF00596 Class II Aldolase and Adducin N-terminal domain DGN07_10025 PF13520 Amino acid permease DGN07_10030 PF13520 Amino acid permease DGN07_10040 PF01842 ACT domain DGN07_10040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DGN07_10040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DGN07_10045 PF01565 FAD binding domain DGN07_10045 PF02913 FAD linked oxidases, C-terminal domain DGN07_10065 PF08207 Elongation factor P (EF-P) KOW-like domain DGN07_10065 PF09285 Elongation factor P, C-terminal DGN07_10065 PF01132 Elongation factor P (EF-P) OB domain DGN07_10070 PF00106 short chain dehydrogenase DGN07_10075 PF00682 HMGL-like DGN07_10085 PF00378 Enoyl-CoA hydratase/isomerase DGN07_10095 PF07664 Ferrous iron transport protein B C terminus DGN07_10095 PF02421 Ferrous iron transport protein B DGN07_10095 PF07670 Nucleoside recognition DGN07_10110 PF00155 Aminotransferase class I and II DGN07_10120 PF05173 Dihydrodipicolinate reductase, C-terminus DGN07_10120 PF01113 Dihydrodipicolinate reductase, N-terminus DGN07_10125 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DGN07_10125 PF00117 Glutamine amidotransferase class-I DGN07_10135 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DGN07_10135 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DGN07_10135 PF02142 MGS-like domain DGN07_10140 PF01272 Transcription elongation factor, GreA/GreB, C-term DGN07_10140 PF03449 Transcription elongation factor, N-terminal DGN07_10150 PF17768 RecJ OB domain DGN07_10150 PF01368 DHH family DGN07_10150 PF02272 DHHA1 domain DGN07_10160 PF04397 LytTr DNA-binding domain DGN07_10160 PF00072 Response regulator receiver domain DGN07_10170 PF00152 tRNA synthetases class II (D, K and N) DGN07_10170 PF01336 OB-fold nucleic acid binding domain DGN07_10175 PF00072 Response regulator receiver domain DGN07_10180 PF00512 His Kinase A (phospho-acceptor) domain DGN07_10180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_10180 PF01627 Hpt domain DGN07_10180 PF00072 Response regulator receiver domain DGN07_10185 PF00072 Response regulator receiver domain DGN07_10185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_10185 PF00512 His Kinase A (phospho-acceptor) domain DGN07_10185 PF01627 Hpt domain DGN07_10190 PF00378 Enoyl-CoA hydratase/isomerase DGN07_10195 PF13193 AMP-binding enzyme C-terminal domain DGN07_10195 PF00501 AMP-binding enzyme DGN07_10205 PF00330 Aconitase family (aconitate hydratase) DGN07_10205 PF00694 Aconitase C-terminal domain DGN07_10220 PF00330 Aconitase family (aconitate hydratase) DGN07_10220 PF06434 Aconitate hydratase 2 N-terminus DGN07_10220 PF11791 Aconitate B N-terminal domain DGN07_10225 PF00561 alpha/beta hydrolase fold DGN07_10230 PF00563 EAL domain DGN07_10230 PF00990 Diguanylate cyclase, GGDEF domain DGN07_10230 PF03707 Bacterial signalling protein N terminal repeat DGN07_10235 PF01339 CheB methylesterase DGN07_10235 PF00072 Response regulator receiver domain DGN07_10240 PF03975 CheD chemotactic sensory transduction DGN07_10245 PF01739 CheR methyltransferase, SAM binding domain DGN07_10245 PF03705 CheR methyltransferase, all-alpha domain DGN07_10250 PF00672 HAMP domain DGN07_10250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN07_10250 PF02203 Tar ligand binding domain homologue DGN07_10265 PF01584 CheW-like domain DGN07_10270 PF07238 PilZ domain DGN07_10270 PF07317 Flagellar regulator YcgR DGN07_10295 PF00672 HAMP domain DGN07_10295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN07_10295 PF02203 Tar ligand binding domain homologue DGN07_10300 PF00672 HAMP domain DGN07_10300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN07_10300 PF02203 Tar ligand binding domain homologue DGN07_10305 PF02203 Tar ligand binding domain homologue DGN07_10305 PF00672 HAMP domain DGN07_10305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN07_10310 PF00672 HAMP domain DGN07_10310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN07_10310 PF02203 Tar ligand binding domain homologue DGN07_10320 PF00672 HAMP domain DGN07_10320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN07_10320 PF02203 Tar ligand binding domain homologue DGN07_10330 PF00672 HAMP domain DGN07_10330 PF02203 Tar ligand binding domain homologue DGN07_10330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN07_10335 PF00672 HAMP domain DGN07_10335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN07_10345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN07_10345 PF08269 Cache domain DGN07_10345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN07_10345 PF08269 Cache domain DGN07_10355 PF00672 HAMP domain DGN07_10355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN07_10355 PF02203 Tar ligand binding domain homologue DGN07_10360 PF01584 CheW-like domain DGN07_10360 PF09078 CheY binding DGN07_10360 PF02895 Signal transducing histidine kinase, homodimeric domain DGN07_10360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_10360 PF01627 Hpt domain DGN07_10365 PF00072 Response regulator receiver domain DGN07_10375 PF01584 CheW-like domain DGN07_10380 PF13614 AAA domain DGN07_10390 PF01618 MotA/TolQ/ExbB proton channel family DGN07_10410 PF05598 Transposase domain (DUF772) DGN07_10410 PF01609 Transposase DDE domain DGN07_10470 PF02895 Signal transducing histidine kinase, homodimeric domain DGN07_10470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_10470 PF01627 Hpt domain DGN07_10470 PF00072 Response regulator receiver domain DGN07_10470 PF01584 CheW-like domain DGN07_10475 PF04344 Chemotaxis phosphatase, CheZ DGN07_10480 PF00072 Response regulator receiver domain DGN07_10485 PF04539 Sigma-70 region 3 DGN07_10485 PF04545 Sigma-70, region 4 DGN07_10485 PF04542 Sigma-70 region 2 DGN07_10490 PF10609 NUBPL iron-transfer P-loop NTPase DGN07_10495 PF00448 SRP54-type protein, GTPase domain DGN07_10505 PF00771 FHIPEP family DGN07_10510 PF01312 FlhB HrpN YscU SpaS Family DGN07_10520 PF00990 Diguanylate cyclase, GGDEF domain DGN07_10535 PF01311 Bacterial export proteins, family 1 DGN07_10540 PF01313 Bacterial export proteins, family 3 DGN07_10560 PF00813 FliP family DGN07_10565 PF04347 Flagellar biosynthesis protein, FliO DGN07_10570 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DGN07_10575 PF02154 Flagellar motor switch protein FliM DGN07_10575 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DGN07_10595 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DGN07_10595 PF18269 T3SS EscN ATPase C-terminal domain DGN07_10605 PF14842 FliG N-terminal domain DGN07_10605 PF14841 FliG middle domain DGN07_10605 PF01706 FliG C-terminal domain DGN07_10610 PF08345 Flagellar M-ring protein C-terminal DGN07_10610 PF01514 Secretory protein of YscJ/FliF family DGN07_10615 PF02049 Flagellar hook-basal body complex protein FliE DGN07_10620 PF00534 Glycosyl transferases group 1 DGN07_10620 PF00535 Glycosyl transferase family 2 DGN07_10630 PF05598 Transposase domain (DUF772) DGN07_10630 PF01609 Transposase DDE domain DGN07_10670 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DGN07_10670 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DGN07_10680 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DGN07_10685 PF00158 Sigma-54 interaction domain DGN07_10685 PF06490 Flagellar regulatory protein FleQ DGN07_10685 PF02954 Bacterial regulatory protein, Fis family DGN07_10690 PF01339 CheB methylesterase DGN07_10690 PF00072 Response regulator receiver domain DGN07_10695 PF00309 Sigma-54 factor, Activator interacting domain (AID) DGN07_10695 PF04963 Sigma-54 factor, core binding domain DGN07_10695 PF04552 Sigma-54, DNA binding domain DGN07_10700 PF00072 Response regulator receiver domain DGN07_10700 PF00196 Bacterial regulatory proteins, luxR family DGN07_10715 PF02561 Flagellar protein FliS DGN07_10720 PF07195 Flagellar hook-associated protein 2 C-terminus DGN07_10720 PF07196 Flagellin hook IN motif DGN07_10720 PF02465 Flagellar hook-associated protein 2 N-terminus DGN07_10725 PF00700 Bacterial flagellin C-terminal helical region DGN07_10725 PF00669 Bacterial flagellin N-terminal helical region DGN07_10735 PF01609 Transposase DDE domain DGN07_10735 PF05598 Transposase domain (DUF772) DGN07_10740 PF00700 Bacterial flagellin C-terminal helical region DGN07_10740 PF00669 Bacterial flagellin N-terminal helical region DGN07_10745 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DGN07_10745 PF07196 Flagellin hook IN motif DGN07_10750 PF10135 Rod binding protein DGN07_10750 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DGN07_10755 PF02119 Flagellar P-ring protein DGN07_10760 PF02107 Flagellar L-ring protein DGN07_10765 PF00460 Flagella basal body rod protein DGN07_10765 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DGN07_10770 PF00460 Flagella basal body rod protein DGN07_10770 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DGN07_10775 PF07559 Flagellar basal body protein FlaE DGN07_10775 PF00460 Flagella basal body rod protein DGN07_10775 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DGN07_10780 PF03963 Flagellar hook capping protein - N-terminal region DGN07_10785 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DGN07_10785 PF00460 Flagella basal body rod protein DGN07_10795 PF00072 Response regulator receiver domain DGN07_10795 PF01584 CheW-like domain DGN07_10825 PF00989 PAS fold DGN07_10825 PF00512 His Kinase A (phospho-acceptor) domain DGN07_10825 PF13188 PAS domain DGN07_10825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_10825 PF13426 PAS domain DGN07_10830 PF00563 EAL domain DGN07_10830 PF03707 Bacterial signalling protein N terminal repeat DGN07_10830 PF00990 Diguanylate cyclase, GGDEF domain DGN07_10835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_10835 PF07730 Histidine kinase DGN07_10840 PF00990 Diguanylate cyclase, GGDEF domain DGN07_10840 PF00563 EAL domain DGN07_10840 PF03707 Bacterial signalling protein N terminal repeat DGN07_10850 PF12729 Four helix bundle sensory module for signal transduction DGN07_10850 PF00672 HAMP domain DGN07_10850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN07_10855 PF04356 Protein of unknown function (DUF489) DGN07_10865 PF00293 NUDIX domain DGN07_10870 PF02617 ATP-dependent Clp protease adaptor protein ClpS DGN07_10875 PF17871 AAA lid domain DGN07_10875 PF02861 Clp amino terminal domain, pathogenicity island component DGN07_10875 PF10431 C-terminal, D2-small domain, of ClpB protein DGN07_10875 PF00004 ATPase family associated with various cellular activities (AAA) DGN07_10875 PF07724 AAA domain (Cdc48 subfamily) DGN07_10880 PF01176 Translation initiation factor 1A / IF-1 DGN07_10885 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DGN07_10895 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGN07_10900 PF01580 FtsK/SpoIIIE family DGN07_10900 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DGN07_10900 PF17854 FtsK alpha domain DGN07_10900 PF09397 Ftsk gamma domain DGN07_10910 PF03548 Outer membrane lipoprotein carrier protein LolA DGN07_10920 PF16193 AAA C-terminal domain DGN07_10920 PF12002 MgsA AAA+ ATPase C terminal DGN07_10920 PF00004 ATPase family associated with various cellular activities (AAA) DGN07_10925 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DGN07_10935 PF02803 Thiolase, C-terminal domain DGN07_10935 PF00108 Thiolase, N-terminal domain DGN07_10940 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DGN07_10940 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DGN07_10940 PF00378 Enoyl-CoA hydratase/isomerase DGN07_10950 PF00334 Nucleoside diphosphate kinase DGN07_10955 PF04055 Radical SAM superfamily DGN07_10965 PF13464 Domain of unknown function (DUF4115) DGN07_10975 PF01011 PQQ enzyme repeat DGN07_10975 PF13360 PQQ-like domain DGN07_10980 PF01926 50S ribosome-binding GTPase DGN07_10980 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DGN07_10985 PF03454 MoeA C-terminal region (domain IV) DGN07_10985 PF00994 Probable molybdopterin binding domain DGN07_10985 PF03453 MoeA N-terminal region (domain I and II) DGN07_10990 PF00899 ThiF family DGN07_11015 PF08240 Alcohol dehydrogenase GroES-like domain DGN07_11015 PF13823 Alcohol dehydrogenase GroES-associated DGN07_11015 PF00107 Zinc-binding dehydrogenase DGN07_11025 PF03372 Endonuclease/Exonuclease/phosphatase family DGN07_11035 PF03453 MoeA N-terminal region (domain I and II) DGN07_11035 PF03454 MoeA C-terminal region (domain IV) DGN07_11035 PF00994 Probable molybdopterin binding domain DGN07_11040 PF12804 MobA-like NTP transferase domain DGN07_11065 PF00561 alpha/beta hydrolase fold DGN07_11070 PF01566 Natural resistance-associated macrophage protein DGN07_11075 PF01325 Iron dependent repressor, N-terminal DNA binding domain DGN07_11075 PF02742 Iron dependent repressor, metal binding and dimerisation domain DGN07_11080 PF14437 MafB19-like deaminase DGN07_11085 PF00929 Exonuclease DGN07_11090 PF05552 Conserved TM helix DGN07_11090 PF00924 Mechanosensitive ion channel DGN07_11095 PF00391 PEP-utilising enzyme, mobile domain DGN07_11095 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DGN07_11095 PF02896 PEP-utilising enzyme, TIM barrel domain DGN07_11100 PF03618 Kinase/pyrophosphorylase DGN07_11120 PF01066 CDP-alcohol phosphatidyltransferase DGN07_11130 PF00561 alpha/beta hydrolase fold DGN07_11145 PF01266 FAD dependent oxidoreductase DGN07_11145 PF00355 Rieske [2Fe-2S] domain DGN07_11155 PF00575 S1 RNA binding domain DGN07_11155 PF09371 Tex-like protein N-terminal domain DGN07_11155 PF16921 Tex protein YqgF-like domain DGN07_11155 PF17674 HHH domain DGN07_11160 PF00512 His Kinase A (phospho-acceptor) domain DGN07_11160 PF00072 Response regulator receiver domain DGN07_11160 PF09308 LuxQ, periplasmic DGN07_11160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_11200 PF00034 Cytochrome c DGN07_11210 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGN07_11215 PF00873 AcrB/AcrD/AcrF family DGN07_11220 PF00873 AcrB/AcrD/AcrF family DGN07_11225 PF01081 KDPG and KHG aldolase DGN07_11230 PF00920 Dehydratase family DGN07_11235 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DGN07_11240 PF02685 Glucokinase DGN07_11245 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DGN07_11245 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DGN07_11250 PF00005 ABC transporter DGN07_11250 PF17912 MalK OB fold domain DGN07_11255 PF01571 Aminomethyltransferase folate-binding domain DGN07_11265 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DGN07_11270 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DGN07_11275 PF00890 FAD binding domain DGN07_11275 PF02910 Fumarate reductase flavoprotein C-term DGN07_11285 PF13085 2Fe-2S iron-sulfur cluster binding domain DGN07_11290 PF03937 Flavinator of succinate dehydrogenase DGN07_11300 PF12704 MacB-like periplasmic core domain DGN07_11300 PF02687 FtsX-like permease family DGN07_11305 PF00005 ABC transporter DGN07_11315 PF00753 Metallo-beta-lactamase superfamily DGN07_11315 PF03772 Competence protein DGN07_11320 PF01618 MotA/TolQ/ExbB proton channel family DGN07_11325 PF02472 Biopolymer transport protein ExbD/TolR DGN07_11330 PF00664 ABC transporter transmembrane region DGN07_11330 PF00005 ABC transporter DGN07_11335 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DGN07_11340 PF02348 Cytidylyltransferase DGN07_11345 PF01451 Low molecular weight phosphotyrosine protein phosphatase DGN07_11355 PF01541 GIY-YIG catalytic domain DGN07_11355 PF02151 UvrB/uvrC motif DGN07_11355 PF08459 UvrC Helix-hairpin-helix N-terminal DGN07_11360 PF01066 CDP-alcohol phosphatidyltransferase DGN07_11375 PF00872 Transposase, Mutator family DGN07_11385 PF00872 Transposase, Mutator family DGN07_11395 PF04055 Radical SAM superfamily DGN07_11395 PF18693 TRAM domain DGN07_11395 PF00919 Uncharacterized protein family UPF0004 DGN07_11400 PF01272 Transcription elongation factor, GreA/GreB, C-term DGN07_11400 PF03449 Transcription elongation factor, N-terminal DGN07_11415 PF00293 NUDIX domain DGN07_11420 PF05872 Bacterial protein of unknown function (DUF853) DGN07_11435 PF02666 Phosphatidylserine decarboxylase DGN07_11440 PF02630 SCO1/SenC DGN07_11445 PF05175 Methyltransferase small domain DGN07_11450 PF01264 Chorismate synthase DGN07_11455 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DGN07_11455 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DGN07_11460 PF01118 Semialdehyde dehydrogenase, NAD binding domain DGN07_11460 PF02774 Semialdehyde dehydrogenase, dimerisation domain DGN07_11475 PF01416 tRNA pseudouridine synthase DGN07_11480 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DGN07_11485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN07_11485 PF03466 LysR substrate binding domain DGN07_11490 PF00291 Pyridoxal-phosphate dependent enzyme DGN07_11500 PF00290 Tryptophan synthase alpha chain DGN07_11505 PF01039 Carboxyl transferase domain DGN07_11505 PF17848 Acetyl-coA carboxylase zinc finger domain DGN07_11510 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DGN07_11510 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DGN07_11510 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DGN07_11510 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DGN07_11540 PF00106 short chain dehydrogenase DGN07_11545 PF00121 Triosephosphate isomerase DGN07_11560 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DGN07_11565 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DGN07_11570 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DGN07_11575 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DGN07_11585 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DGN07_11585 PF10531 SLBB domain DGN07_11585 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DGN07_11590 PF00384 Molybdopterin oxidoreductase DGN07_11590 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal DGN07_11590 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DGN07_11595 PF00146 NADH dehydrogenase DGN07_11600 PF12838 4Fe-4S dicluster domain DGN07_11605 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DGN07_11610 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DGN07_11615 PF00361 Proton-conducting membrane transporter DGN07_11615 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DGN07_11620 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus DGN07_11620 PF00361 Proton-conducting membrane transporter DGN07_11625 PF00361 Proton-conducting membrane transporter DGN07_11635 PF17384 RimP C-terminal SH3 domain DGN07_11635 PF02576 RimP N-terminal domain DGN07_11640 PF08529 NusA N-terminal domain DGN07_11640 PF13184 NusA-like KH domain DGN07_11640 PF00575 S1 RNA binding domain DGN07_11645 PF11987 Translation-initiation factor 2 DGN07_11645 PF08364 Bacterial translation initiation factor IF-2 associated region DGN07_11645 PF04760 Translation initiation factor IF-2, N-terminal region DGN07_11645 PF00009 Elongation factor Tu GTP binding domain DGN07_11650 PF02033 Ribosome-binding factor A DGN07_11655 PF09157 Pseudouridine synthase II TruB, C-terminal DGN07_11655 PF16198 tRNA pseudouridylate synthase B C-terminal domain DGN07_11655 PF01509 TruB family pseudouridylate synthase (N terminal domain) DGN07_11660 PF00312 Ribosomal protein S15 DGN07_11665 PF00013 KH domain DGN07_11665 PF01138 3' exoribonuclease family, domain 1 DGN07_11665 PF03725 3' exoribonuclease family, domain 2 DGN07_11665 PF00575 S1 RNA binding domain DGN07_11665 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DGN07_11675 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DGN07_11675 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DGN07_11685 PF00731 AIR carboxylase DGN07_11690 PF02222 ATP-grasp domain DGN07_11690 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DGN07_11695 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DGN07_11695 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DGN07_11700 PF00462 Glutaredoxin DGN07_11710 PF01914 MarC family integral membrane protein DGN07_11720 PF00593 TonB dependent receptor DGN07_11725 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases DGN07_11725 PF11892 Domain of unknown function (DUF3412) DGN07_11725 PF03641 Possible lysine decarboxylase DGN07_11730 PF07963 Prokaryotic N-terminal methylation motif DGN07_11730 PF00114 Pilin (bacterial filament) DGN07_11750 PF05567 Neisseria PilC beta-propeller domain DGN07_11775 PF00872 Transposase, Mutator family DGN07_11790 PF00872 Transposase, Mutator family DGN07_11800 PF17757 UvrB interaction domain DGN07_11800 PF12344 Ultra-violet resistance protein B DGN07_11800 PF02151 UvrB/uvrC motif DGN07_11800 PF04851 Type III restriction enzyme, res subunit DGN07_11800 PF00271 Helicase conserved C-terminal domain DGN07_11815 PF02534 Type IV secretory system Conjugative DNA transfer DGN07_11835 PF03743 Bacterial conjugation TrbI-like protein DGN07_11840 PF00437 Type II/IV secretion system protein DGN07_11845 PF01464 Transglycosylase SLT domain DGN07_11855 PF05101 Type IV secretory pathway, VirB3-like protein DGN07_11860 PF03135 CagE, TrbE, VirB family, component of type IV transporter system DGN07_11900 PF00872 Transposase, Mutator family DGN07_11925 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DGN07_11925 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DGN07_11925 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DGN07_11935 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DGN07_11945 PF00581 Rhodanese-like domain DGN07_11945 PF17773 UPF0176 acylphosphatase like domain DGN07_11950 PF00196 Bacterial regulatory proteins, luxR family DGN07_11950 PF00072 Response regulator receiver domain DGN07_11955 PF12111 Polyribonucleotide phosphorylase C terminal DGN07_11955 PF10150 Ribonuclease E/G family DGN07_11955 PF00575 S1 RNA binding domain DGN07_11960 PF00849 RNA pseudouridylate synthase DGN07_11960 PF01479 S4 domain DGN07_11965 PF11737 Protein of unknown function (DUF3300) DGN07_11970 PF02535 ZIP Zinc transporter DGN07_11980 PF01329 Pterin 4 alpha carbinolamine dehydratase DGN07_11985 PF01106 NifU-like domain DGN07_12035 PF12697 Alpha/beta hydrolase family DGN07_12035 PF08241 Methyltransferase domain DGN07_12040 PF05199 GMC oxidoreductase DGN07_12040 PF00732 GMC oxidoreductase DGN07_12045 PF00106 short chain dehydrogenase DGN07_12060 PF02303 Helix-destabilising protein DGN07_12090 PF05857 TraX protein DGN07_12130 PF17091 Inovirus G7P protein DGN07_12165 PF00975 Thioesterase domain DGN07_12170 PF03621 MbtH-like protein DGN07_12180 PF00005 ABC transporter DGN07_12185 PF02801 Beta-ketoacyl synthase, C-terminal domain DGN07_12185 PF00109 Beta-ketoacyl synthase, N-terminal domain DGN07_12190 PF08659 KR domain DGN07_12190 PF02801 Beta-ketoacyl synthase, C-terminal domain DGN07_12190 PF14765 Polyketide synthase dehydratase DGN07_12190 PF00550 Phosphopantetheine attachment site DGN07_12190 PF00109 Beta-ketoacyl synthase, N-terminal domain DGN07_12190 PF13193 AMP-binding enzyme C-terminal domain DGN07_12190 PF00668 Condensation domain DGN07_12190 PF00501 AMP-binding enzyme DGN07_12190 PF16197 Ketoacyl-synthetase C-terminal extension DGN07_12195 PF14765 Polyketide synthase dehydratase DGN07_12195 PF00550 Phosphopantetheine attachment site DGN07_12195 PF08242 Methyltransferase domain DGN07_12195 PF08659 KR domain DGN07_12195 PF02801 Beta-ketoacyl synthase, C-terminal domain DGN07_12195 PF00109 Beta-ketoacyl synthase, N-terminal domain DGN07_12195 PF16197 Ketoacyl-synthetase C-terminal extension DGN07_12200 PF14765 Polyketide synthase dehydratase DGN07_12200 PF00109 Beta-ketoacyl synthase, N-terminal domain DGN07_12200 PF08659 KR domain DGN07_12200 PF08242 Methyltransferase domain DGN07_12200 PF00550 Phosphopantetheine attachment site DGN07_12200 PF16197 Ketoacyl-synthetase C-terminal extension DGN07_12200 PF02801 Beta-ketoacyl synthase, C-terminal domain DGN07_12210 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DGN07_12210 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DGN07_12215 PF13193 AMP-binding enzyme C-terminal domain DGN07_12215 PF00668 Condensation domain DGN07_12215 PF00668 Condensation domain DGN07_12215 PF00550 Phosphopantetheine attachment site DGN07_12215 PF00550 Phosphopantetheine attachment site DGN07_12215 PF13193 AMP-binding enzyme C-terminal domain DGN07_12215 PF00501 AMP-binding enzyme DGN07_12215 PF00501 AMP-binding enzyme DGN07_12220 PF00668 Condensation domain DGN07_12220 PF00501 AMP-binding enzyme DGN07_12220 PF13193 AMP-binding enzyme C-terminal domain DGN07_12220 PF00550 Phosphopantetheine attachment site DGN07_12245 PF00872 Transposase, Mutator family DGN07_12255 PF01609 Transposase DDE domain DGN07_12255 PF05598 Transposase domain (DUF772) DGN07_12265 PF03466 LysR substrate binding domain DGN07_12265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN07_12270 PF08240 Alcohol dehydrogenase GroES-like domain DGN07_12270 PF00107 Zinc-binding dehydrogenase DGN07_12275 PF01965 DJ-1/PfpI family DGN07_12280 PF00881 Nitroreductase family DGN07_12295 PF00872 Transposase, Mutator family DGN07_12315 PF05114 Protein of unknown function (DUF692) DGN07_12340 PF13581 Histidine kinase-like ATPase domain DGN07_12340 PF13426 PAS domain DGN07_12340 PF07536 HWE histidine kinase DGN07_12345 PF01494 FAD binding domain DGN07_12360 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DGN07_12365 PF07995 Glucose / Sorbosone dehydrogenase DGN07_12375 PF00144 Beta-lactamase DGN07_12380 PF00072 Response regulator receiver domain DGN07_12380 PF04397 LytTr DNA-binding domain DGN07_12385 PF13492 GAF domain DGN07_12385 PF07694 5TMR of 5TMR-LYT DGN07_12385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_12385 PF06580 Histidine kinase DGN07_12395 PF03797 Autotransporter beta-domain DGN07_12395 PF00082 Subtilase family DGN07_12405 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGN07_12410 PF00873 AcrB/AcrD/AcrF family DGN07_12420 PF00512 His Kinase A (phospho-acceptor) domain DGN07_12420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_12420 PF08448 PAS fold DGN07_12420 PF00072 Response regulator receiver domain DGN07_12420 PF13426 PAS domain DGN07_12425 PF00196 Bacterial regulatory proteins, luxR family DGN07_12425 PF00072 Response regulator receiver domain DGN07_12430 PF12951 Passenger-associated-transport-repeat DGN07_12435 PF08447 PAS fold DGN07_12435 PF00990 Diguanylate cyclase, GGDEF domain DGN07_12435 PF08448 PAS fold DGN07_12435 PF00563 EAL domain DGN07_12455 PF05974 Domain of unknown function (DUF892) DGN07_12475 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DGN07_12475 PF10414 Sirohaem synthase dimerisation region DGN07_12475 PF14824 Sirohaem biosynthesis protein central DGN07_12490 PF05977 Transmembrane secretion effector DGN07_12495 PF07969 Amidohydrolase family DGN07_12505 PF00857 Isochorismatase family DGN07_12510 PF12833 Helix-turn-helix domain DGN07_12520 PF00196 Bacterial regulatory proteins, luxR family DGN07_12520 PF00072 Response regulator receiver domain DGN07_12540 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus DGN07_12540 PF00361 Proton-conducting membrane transporter DGN07_12540 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DGN07_12550 PF00872 Transposase, Mutator family DGN07_12560 PF00117 Glutamine amidotransferase class-I DGN07_12560 PF00958 GMP synthase C terminal domain DGN07_12560 PF02540 NAD synthase DGN07_12565 PF00571 CBS domain DGN07_12565 PF00478 IMP dehydrogenase / GMP reductase domain DGN07_12570 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DGN07_12570 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DGN07_12585 PF02254 TrkA-N domain DGN07_12585 PF00999 Sodium/hydrogen exchanger family DGN07_12595 PF00483 Nucleotidyl transferase DGN07_12600 PF02719 Polysaccharide biosynthesis protein DGN07_12605 PF00953 Glycosyl transferase family 4 DGN07_12610 PF18073 Rubredoxin metal binding domain DGN07_12620 PF00216 Bacterial DNA-binding protein DGN07_12625 PF00575 S1 RNA binding domain DGN07_12630 PF02224 Cytidylate kinase DGN07_12635 PF00444 Ribosomal protein L36 DGN07_12650 PF04371 Porphyromonas-type peptidyl-arginine deiminase DGN07_12655 PF00795 Carbon-nitrogen hydrolase DGN07_12680 PF00528 Binding-protein-dependent transport system inner membrane component DGN07_12685 PF00528 Binding-protein-dependent transport system inner membrane component DGN07_12705 PF00356 Bacterial regulatory proteins, lacI family DGN07_12715 PF03795 YCII-related domain DGN07_12720 PF02616 Segregation and condensation protein ScpA DGN07_12725 PF04079 Segregation and condensation complex subunit ScpB DGN07_12730 PF00849 RNA pseudouridylate synthase DGN07_12730 PF01479 S4 domain DGN07_12750 PF00795 Carbon-nitrogen hydrolase DGN07_12755 PF00155 Aminotransferase class I and II DGN07_12760 PF00005 ABC transporter DGN07_12765 PF03379 CcmB protein DGN07_12770 PF01578 Cytochrome C assembly protein DGN07_12780 PF03100 CcmE DGN07_12785 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DGN07_12785 PF01578 Cytochrome C assembly protein DGN07_12790 PF08534 Redoxin DGN07_12795 PF03918 Cytochrome C biogenesis protein DGN07_12805 PF00561 alpha/beta hydrolase fold DGN07_12810 PF00313 'Cold-shock' DNA-binding domain DGN07_12815 PF00664 ABC transporter transmembrane region DGN07_12815 PF00005 ABC transporter DGN07_12820 PF00664 ABC transporter transmembrane region DGN07_12820 PF00005 ABC transporter DGN07_12825 PF01654 Cytochrome bd terminal oxidase subunit I DGN07_12830 PF02322 Cytochrome bd terminal oxidase subunit II DGN07_12850 PF00872 Transposase, Mutator family DGN07_12885 PF01551 Peptidase family M23 DGN07_12900 PF00589 Phage integrase family DGN07_12910 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DGN07_12910 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DGN07_12920 PF00171 Aldehyde dehydrogenase family DGN07_12925 PF00696 Amino acid kinase family DGN07_12925 PF01472 PUA domain DGN07_12935 PF00206 Lyase DGN07_12940 PF01118 Semialdehyde dehydrogenase, NAD binding domain DGN07_12950 PF00696 Amino acid kinase family DGN07_12950 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase DGN07_12955 PF07687 Peptidase dimerisation domain DGN07_12955 PF01546 Peptidase family M20/M25/M40 DGN07_12965 PF00764 Arginosuccinate synthase DGN07_12970 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DGN07_12970 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DGN07_12980 PF09190 DALR domain DGN07_12980 PF01406 tRNA synthetases class I (C) catalytic domain DGN07_12985 PF02657 Fe-S metabolism associated domain DGN07_12995 PF01258 Prokaryotic dksA/traR C4-type zinc finger DGN07_13000 PF01809 Putative membrane protein insertion efficiency factor DGN07_13005 PF01979 Amidohydrolase family DGN07_13010 PF01551 Peptidase family M23 DGN07_13010 PF08460 Bacterial SH3 domain DGN07_13020 PF06751 Ethanolamine ammonia lyase large subunit (EutB) DGN07_13025 PF05985 Ethanolamine ammonia-lyase light chain (EutC) DGN07_13035 PF00753 Metallo-beta-lactamase superfamily DGN07_13060 PF00295 Glycosyl hydrolases family 28 DGN07_13085 PF13419 Haloacid dehalogenase-like hydrolase DGN07_13095 PF01979 Amidohydrolase family DGN07_13105 PF01132 Elongation factor P (EF-P) OB domain DGN07_13105 PF08207 Elongation factor P (EF-P) KOW-like domain DGN07_13105 PF09285 Elongation factor P, C-terminal DGN07_13110 PF04055 Radical SAM superfamily DGN07_13115 PF00563 EAL domain DGN07_13115 PF00990 Diguanylate cyclase, GGDEF domain DGN07_13115 PF03707 Bacterial signalling protein N terminal repeat DGN07_13115 PF13188 PAS domain DGN07_13125 PF00588 SpoU rRNA Methylase family DGN07_13130 PF00459 Inositol monophosphatase family DGN07_13135 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DGN07_13135 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DGN07_13140 PF00545 ribonuclease DGN07_13155 PF16326 ABC transporter C-terminal domain DGN07_13155 PF12848 ABC transporter DGN07_13155 PF00005 ABC transporter DGN07_13160 PF00271 Helicase conserved C-terminal domain DGN07_13160 PF00270 DEAD/DEAH box helicase DGN07_13160 PF03880 DbpA RNA binding domain DGN07_13165 PF00156 Phosphoribosyl transferase domain DGN07_13170 PF02696 Uncharacterized ACR, YdiU/UPF0061 family DGN07_13175 PF07859 alpha/beta hydrolase fold DGN07_13180 PF14497 Glutathione S-transferase, C-terminal domain DGN07_13180 PF02798 Glutathione S-transferase, N-terminal domain DGN07_13185 PF00313 'Cold-shock' DNA-binding domain DGN07_13190 PF07152 YaeQ protein DGN07_13200 PF00563 EAL domain DGN07_13200 PF00990 Diguanylate cyclase, GGDEF domain DGN07_13200 PF00072 Response regulator receiver domain DGN07_13205 PF05598 Transposase domain (DUF772) DGN07_13205 PF01609 Transposase DDE domain DGN07_13210 PF01435 Peptidase family M48 DGN07_13215 PF00749 tRNA synthetases class I (E and Q), catalytic domain DGN07_13220 PF00106 short chain dehydrogenase DGN07_13225 PF07879 PHB/PHA accumulation regulator DNA-binding domain DGN07_13225 PF05233 PHB accumulation regulatory domain DGN07_13245 PF01119 DNA mismatch repair protein, C-terminal domain DGN07_13245 PF08676 MutL C terminal dimerisation domain DGN07_13250 PF01520 N-acetylmuramoyl-L-alanine amidase DGN07_13250 PF11741 AMIN domain DGN07_13255 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DGN07_13260 PF01256 Carbohydrate kinase DGN07_13260 PF03853 YjeF-related protein N-terminus DGN07_13265 PF08331 Domain of unknown function (DUF1730) DGN07_13270 PF02601 Exonuclease VII, large subunit DGN07_13270 PF13742 OB-fold nucleic acid binding domain DGN07_13285 PF03781 Sulfatase-modifying factor enzyme 1 DGN07_13300 PF01612 3'-5' exonuclease DGN07_13300 PF00570 HRDC domain DGN07_13305 PF04679 ATP dependent DNA ligase C terminal region DGN07_13305 PF01068 ATP dependent DNA ligase domain DGN07_13305 PF13298 DNA polymerase Ligase (LigD) DGN07_13330 PF01584 CheW-like domain DGN07_13335 PF00672 HAMP domain DGN07_13335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN07_13335 PF02743 Cache domain DGN07_13340 PF02245 Methylpurine-DNA glycosylase (MPG) DGN07_13345 PF00271 Helicase conserved C-terminal domain DGN07_13345 PF08494 DEAD/H associated DGN07_13345 PF00270 DEAD/DEAH box helicase DGN07_13365 PF04386 Stringent starvation protein B DGN07_13370 PF00043 Glutathione S-transferase, C-terminal domain DGN07_13370 PF02798 Glutathione S-transferase, N-terminal domain DGN07_13375 PF02167 Cytochrome C1 family DGN07_13380 PF00032 Cytochrome b(C-terminal)/b6/petD DGN07_13380 PF00033 Cytochrome b/b6/petB DGN07_13385 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal DGN07_13385 PF00355 Rieske [2Fe-2S] domain DGN07_13395 PF01464 Transglycosylase SLT domain DGN07_13410 PF01938 TRAM domain DGN07_13410 PF04055 Radical SAM superfamily DGN07_13410 PF00919 Uncharacterized protein family UPF0004 DGN07_13415 PF02562 PhoH-like protein DGN07_13425 PF02130 Uncharacterized protein family UPF0054 DGN07_13435 PF00571 CBS domain DGN07_13435 PF03471 Transporter associated domain DGN07_13450 PF00171 Aldehyde dehydrogenase family DGN07_13455 PF00528 Binding-protein-dependent transport system inner membrane component DGN07_13460 PF00528 Binding-protein-dependent transport system inner membrane component DGN07_13475 PF02321 Outer membrane efflux protein DGN07_13480 PF07690 Major Facilitator Superfamily DGN07_13485 PF13533 Biotin-lipoyl like DGN07_13490 PF13416 Bacterial extracellular solute-binding protein DGN07_13495 PF00202 Aminotransferase class-III DGN07_13500 PF00120 Glutamine synthetase, catalytic domain DGN07_13505 PF07722 Peptidase C26 DGN07_13510 PF00120 Glutamine synthetase, catalytic domain DGN07_13515 PF01266 FAD dependent oxidoreductase DGN07_13520 PF00072 Response regulator receiver domain DGN07_13520 PF00990 Diguanylate cyclase, GGDEF domain DGN07_13525 PF01814 Hemerythrin HHE cation binding domain DGN07_13530 PF00083 Sugar (and other) transporter DGN07_13530 PF07690 Major Facilitator Superfamily DGN07_13545 PF00384 Molybdopterin oxidoreductase DGN07_13550 PF02634 FdhD/NarQ family DGN07_13555 PF07690 Major Facilitator Superfamily DGN07_13580 PF00202 Aminotransferase class-III DGN07_13590 PF04286 Protein of unknown function (DUF445) DGN07_13595 PF00672 HAMP domain DGN07_13595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_13595 PF00512 His Kinase A (phospho-acceptor) domain DGN07_13595 PF01627 Hpt domain DGN07_13595 PF00072 Response regulator receiver domain DGN07_13595 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DGN07_13600 PF00072 Response regulator receiver domain DGN07_13610 PF07690 Major Facilitator Superfamily DGN07_13635 PF00106 short chain dehydrogenase DGN07_13640 PF00440 Bacterial regulatory proteins, tetR family DGN07_13645 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DGN07_13650 PF00106 short chain dehydrogenase DGN07_13655 PF00698 Acyl transferase domain DGN07_13655 PF08240 Alcohol dehydrogenase GroES-like domain DGN07_13655 PF16197 Ketoacyl-synthetase C-terminal extension DGN07_13655 PF00109 Beta-ketoacyl synthase, N-terminal domain DGN07_13655 PF02801 Beta-ketoacyl synthase, C-terminal domain DGN07_13655 PF08659 KR domain DGN07_13655 PF00550 Phosphopantetheine attachment site DGN07_13655 PF14765 Polyketide synthase dehydratase DGN07_13665 PF05088 Bacterial NAD-glutamate dehydrogenase DGN07_13675 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGN07_13675 PF00529 HlyD membrane-fusion protein of T1SS DGN07_13680 PF00873 AcrB/AcrD/AcrF family DGN07_13685 PF00356 Bacterial regulatory proteins, lacI family DGN07_13690 PF00391 PEP-utilising enzyme, mobile domain DGN07_13690 PF05524 PEP-utilising enzyme, N-terminal DGN07_13690 PF02896 PEP-utilising enzyme, TIM barrel domain DGN07_13690 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DGN07_13690 PF00381 PTS HPr component phosphorylation site DGN07_13695 PF00294 pfkB family carbohydrate kinase DGN07_13700 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DGN07_13730 PF00872 Transposase, Mutator family DGN07_13765 PF07549 SecD/SecF GG Motif DGN07_13765 PF02355 Protein export membrane protein DGN07_13770 PF07549 SecD/SecF GG Motif DGN07_13770 PF13721 SecD export protein N-terminal TM region DGN07_13770 PF02355 Protein export membrane protein DGN07_13775 PF02699 Preprotein translocase subunit DGN07_13780 PF01702 Queuine tRNA-ribosyltransferase DGN07_13785 PF02547 Queuosine biosynthesis protein DGN07_13830 PF00759 Glycosyl hydrolase family 9 DGN07_13830 PF02927 Cellulase N-terminal ig-like domain DGN07_13840 PF00037 4Fe-4S binding domain DGN07_13855 PF01467 Cytidylyltransferase-like DGN07_13865 PF00183 Hsp90 protein DGN07_13865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_13875 PF01609 Transposase DDE domain DGN07_13875 PF05598 Transposase domain (DUF772) DGN07_13880 PF05598 Transposase domain (DUF772) DGN07_13880 PF01609 Transposase DDE domain DGN07_13915 PF04616 Glycosyl hydrolases family 43 DGN07_13920 PF07532 Bacterial Ig-like domain (group 4) DGN07_13930 PF07715 TonB-dependent Receptor Plug Domain DGN07_13930 PF00593 TonB dependent receptor DGN07_13940 PF00082 Subtilase family DGN07_13940 PF09286 Pro-kumamolisin, activation domain DGN07_13970 PF13520 Amino acid permease DGN07_13985 PF01321 Creatinase/Prolidase N-terminal domain DGN07_13985 PF00557 Metallopeptidase family M24 DGN07_13990 PF00171 Aldehyde dehydrogenase family DGN07_13995 PF00701 Dihydrodipicolinate synthetase family DGN07_14000 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGN07_14000 PF04324 BFD-like [2Fe-2S] binding domain DGN07_14010 PF01266 FAD dependent oxidoreductase DGN07_14015 PF05544 Proline racemase DGN07_14025 PF00448 SRP54-type protein, GTPase domain DGN07_14025 PF02881 SRP54-type protein, helical bundle domain DGN07_14035 PF00730 HhH-GPD superfamily base excision DNA repair protein DGN07_14035 PF00633 Helix-hairpin-helix motif DGN07_14035 PF10576 Iron-sulfur binding domain of endonuclease III DGN07_14035 PF14815 NUDIX domain DGN07_14040 PF04362 Bacterial Fe(2+) trafficking DGN07_14045 PF13426 PAS domain DGN07_14045 PF00072 Response regulator receiver domain DGN07_14045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_14080 PF01609 Transposase DDE domain DGN07_14080 PF05598 Transposase domain (DUF772) DGN07_14095 PF01609 Transposase DDE domain DGN07_14095 PF05598 Transposase domain (DUF772) DGN07_14105 PF05598 Transposase domain (DUF772) DGN07_14105 PF01609 Transposase DDE domain DGN07_14125 PF00589 Phage integrase family DGN07_14135 PF08212 Lipocalin-like domain DGN07_14145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DGN07_14145 PF12806 Acetyl-CoA dehydrogenase C-terminal like DGN07_14145 PF02770 Acyl-CoA dehydrogenase, middle domain DGN07_14145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DGN07_14155 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DGN07_14155 PF02780 Transketolase, C-terminal domain DGN07_14155 PF02779 Transketolase, pyrimidine binding domain DGN07_14175 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family DGN07_14180 PF00753 Metallo-beta-lactamase superfamily DGN07_14180 PF16123 Hydroxyacylglutathione hydrolase C-terminus DGN07_14185 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DGN07_14185 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DGN07_14200 PF03808 Glycosyl transferase WecB/TagA/CpsF family DGN07_14215 PF14667 Polysaccharide biosynthesis C-terminal domain DGN07_14225 PF00534 Glycosyl transferases group 1 DGN07_14225 PF13439 Glycosyltransferase Family 4 DGN07_14245 PF02397 Bacterial sugar transferase DGN07_14265 PF13411 MerR HTH family regulatory protein DGN07_14270 PF00216 Bacterial DNA-binding protein DGN07_14275 PF03147 Ferredoxin-fold anticodon binding domain DGN07_14275 PF01588 Putative tRNA binding domain DGN07_14275 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DGN07_14275 PF03483 B3/4 domain DGN07_14275 PF03484 tRNA synthetase B5 domain DGN07_14280 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DGN07_14280 PF01409 tRNA synthetases class II core domain (F) DGN07_14285 PF00453 Ribosomal protein L20 DGN07_14290 PF01632 Ribosomal protein L35 DGN07_14295 PF00707 Translation initiation factor IF-3, C-terminal domain DGN07_14295 PF05198 Translation initiation factor IF-3, N-terminal domain DGN07_14300 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DGN07_14300 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DGN07_14300 PF03129 Anticodon binding domain DGN07_14300 PF02824 TGS domain DGN07_14305 PF00356 Bacterial regulatory proteins, lacI family DGN07_14310 PF00128 Alpha amylase, catalytic domain DGN07_14310 PF00686 Starch binding domain DGN07_14315 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DGN07_14350 PF01609 Transposase DDE domain DGN07_14350 PF05598 Transposase domain (DUF772) DGN07_14360 PF00872 Transposase, Mutator family DGN07_14385 PF00128 Alpha amylase, catalytic domain DGN07_14390 PF00872 Transposase, Mutator family DGN07_14400 PF03852 DNA mismatch endonuclease Vsr DGN07_14405 PF00145 C-5 cytosine-specific DNA methylase DGN07_14425 PF01738 Dienelactone hydrolase family DGN07_14445 PF00692 dUTPase DGN07_14455 PF10609 NUBPL iron-transfer P-loop NTPase DGN07_14460 PF00593 TonB dependent receptor DGN07_14460 PF07715 TonB-dependent Receptor Plug Domain DGN07_14470 PF01609 Transposase DDE domain DGN07_14470 PF05598 Transposase domain (DUF772) DGN07_14480 PF01431 Peptidase family M13 DGN07_14480 PF05649 Peptidase family M13 DGN07_14485 PF01431 Peptidase family M13 DGN07_14485 PF05649 Peptidase family M13 DGN07_14505 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DGN07_14505 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGN07_14510 PF01266 FAD dependent oxidoreductase DGN07_14515 PF04235 Protein of unknown function (DUF418) DGN07_14520 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DGN07_14525 PF00877 NlpC/P60 family DGN07_14530 PF00877 NlpC/P60 family DGN07_14545 PF00375 Sodium:dicarboxylate symporter family DGN07_14550 PF00245 Alkaline phosphatase DGN07_14560 PF09179 TilS substrate binding domain DGN07_14560 PF11734 TilS substrate C-terminal domain DGN07_14560 PF01171 PP-loop family DGN07_14565 PF02609 Exonuclease VII small subunit DGN07_14570 PF00348 Polyprenyl synthetase DGN07_14575 PF14521 Lysine-specific metallo-endopeptidase DGN07_14585 PF01523 Putative modulator of DNA gyrase DGN07_14590 PF04751 Protein of unknown function (DUF615) DGN07_14595 PF01523 Putative modulator of DNA gyrase DGN07_14605 PF13116 Protein of unknown function DGN07_14605 PF13502 AsmA-like C-terminal region DGN07_14610 PF00575 S1 RNA binding domain DGN07_14610 PF10150 Ribonuclease E/G family DGN07_14615 PF02545 Maf-like protein DGN07_14620 PF04402 Protein of unknown function (DUF541) DGN07_14635 PF02590 Predicted SPOUT methyltransferase DGN07_14650 PF01467 Cytidylyltransferase-like DGN07_14665 PF08264 Anticodon-binding domain of tRNA DGN07_14665 PF00133 tRNA synthetases class I (I, L, M and V) DGN07_14665 PF13603 Leucyl-tRNA synthetase, Domain 2 DGN07_14675 PF00085 Thioredoxin DGN07_14715 PF04070 Domain of unknown function (DUF378) DGN07_14720 PF00872 Transposase, Mutator family DGN07_14725 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DGN07_14735 PF03466 LysR substrate binding domain DGN07_14735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN07_14765 PF00005 ABC transporter DGN07_14765 PF00664 ABC transporter transmembrane region DGN07_14775 PF00873 AcrB/AcrD/AcrF family DGN07_14790 PF02321 Outer membrane efflux protein DGN07_14795 PF00486 Transcriptional regulatory protein, C terminal DGN07_14795 PF00072 Response regulator receiver domain DGN07_14800 PF00512 His Kinase A (phospho-acceptor) domain DGN07_14800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_14800 PF00672 HAMP domain DGN07_14805 PF00999 Sodium/hydrogen exchanger family DGN07_14810 PF00144 Beta-lactamase DGN07_14815 PF03737 Aldolase/RraA DGN07_14830 PF00990 Diguanylate cyclase, GGDEF domain DGN07_14835 PF01479 S4 domain DGN07_14835 PF00849 RNA pseudouridylate synthase DGN07_14840 PF00990 Diguanylate cyclase, GGDEF domain DGN07_14840 PF08448 PAS fold DGN07_14840 PF00563 EAL domain DGN07_14845 PF00270 DEAD/DEAH box helicase DGN07_14845 PF00271 Helicase conserved C-terminal domain DGN07_14845 PF03880 DbpA RNA binding domain DGN07_14850 PF04542 Sigma-70 region 2 DGN07_14850 PF08281 Sigma-70, region 4 DGN07_14895 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DGN07_14895 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DGN07_14910 PF00654 Voltage gated chloride channel DGN07_14915 PF08240 Alcohol dehydrogenase GroES-like domain DGN07_14915 PF00107 Zinc-binding dehydrogenase DGN07_14935 PF07715 TonB-dependent Receptor Plug Domain DGN07_14935 PF00593 TonB dependent receptor DGN07_14945 PF01483 Proprotein convertase P-domain DGN07_14945 PF00082 Subtilase family DGN07_14955 PF00248 Aldo/keto reductase family DGN07_14960 PF07690 Major Facilitator Superfamily DGN07_14965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN07_14965 PF03466 LysR substrate binding domain DGN07_14975 PF12833 Helix-turn-helix domain DGN07_14975 PF06719 AraC-type transcriptional regulator N-terminus DGN07_14985 PF16859 Tetracyclin repressor-like, C-terminal domain DGN07_14985 PF00440 Bacterial regulatory proteins, tetR family DGN07_14990 PF02321 Outer membrane efflux protein DGN07_14995 PF00873 AcrB/AcrD/AcrF family DGN07_15000 PF00529 HlyD membrane-fusion protein of T1SS DGN07_15000 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGN07_15010 PF01475 Ferric uptake regulator family DGN07_15015 PF00749 tRNA synthetases class I (E and Q), catalytic domain DGN07_15040 PF06123 Inner membrane protein CreD DGN07_15050 PF00672 HAMP domain DGN07_15050 PF00512 His Kinase A (phospho-acceptor) domain DGN07_15050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_15055 PF00072 Response regulator receiver domain DGN07_15055 PF00486 Transcriptional regulatory protein, C terminal DGN07_15060 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ DGN07_15070 PF17757 UvrB interaction domain DGN07_15070 PF00270 DEAD/DEAH box helicase DGN07_15070 PF00271 Helicase conserved C-terminal domain DGN07_15070 PF03461 TRCF domain DGN07_15070 PF02559 CarD-like/TRCF domain DGN07_15080 PF01627 Hpt domain DGN07_15080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_15080 PF02895 Signal transducing histidine kinase, homodimeric domain DGN07_15080 PF01584 CheW-like domain DGN07_15080 PF09078 CheY binding DGN07_15085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN07_15085 PF02203 Tar ligand binding domain homologue DGN07_15085 PF00672 HAMP domain DGN07_15090 PF01584 CheW-like domain DGN07_15095 PF00563 EAL domain DGN07_15095 PF00990 Diguanylate cyclase, GGDEF domain DGN07_15095 PF13426 PAS domain DGN07_15100 PF01739 CheR methyltransferase, SAM binding domain DGN07_15100 PF03705 CheR methyltransferase, all-alpha domain DGN07_15105 PF01339 CheB methylesterase DGN07_15105 PF00072 Response regulator receiver domain DGN07_15110 PF13091 PLD-like domain DGN07_15115 PF05649 Peptidase family M13 DGN07_15115 PF01431 Peptidase family M13 DGN07_15125 PF00300 Histidine phosphatase superfamily (branch 1) DGN07_15130 PF04493 Endonuclease V DGN07_15140 PF00872 Transposase, Mutator family DGN07_15145 PF02678 Pirin DGN07_15145 PF05726 Pirin C-terminal cupin domain DGN07_15160 PF02678 Pirin DGN07_15160 PF05726 Pirin C-terminal cupin domain DGN07_15165 PF13722 5TM C-terminal transporter carbon starvation CstA DGN07_15165 PF02554 Carbon starvation protein CstA DGN07_15170 PF04328 Selenoprotein, putative DGN07_15215 PF13478 XdhC Rossmann domain DGN07_15215 PF02625 XdhC and CoxI family DGN07_15220 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DGN07_15220 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DGN07_15225 PF03450 CO dehydrogenase flavoprotein C-terminal domain DGN07_15225 PF00941 FAD binding domain in molybdopterin dehydrogenase DGN07_15230 PF01799 [2Fe-2S] binding domain DGN07_15230 PF00111 2Fe-2S iron-sulfur cluster binding domain DGN07_15230 PF10518 TAT (twin-arginine translocation) pathway signal sequence DGN07_15235 PF00698 Acyl transferase domain DGN07_15235 PF14765 Polyketide synthase dehydratase DGN07_15235 PF00550 Phosphopantetheine attachment site DGN07_15235 PF08659 KR domain DGN07_15235 PF08240 Alcohol dehydrogenase GroES-like domain DGN07_15235 PF00109 Beta-ketoacyl synthase, N-terminal domain DGN07_15235 PF16197 Ketoacyl-synthetase C-terminal extension DGN07_15235 PF00107 Zinc-binding dehydrogenase DGN07_15235 PF02801 Beta-ketoacyl synthase, C-terminal domain DGN07_15240 PF00563 EAL domain DGN07_15240 PF01590 GAF domain DGN07_15240 PF00990 Diguanylate cyclase, GGDEF domain DGN07_15240 PF00360 Phytochrome region DGN07_15245 PF00436 Single-strand binding protein family DGN07_15250 PF00348 Polyprenyl synthetase DGN07_15265 PF02875 Mur ligase family, glutamate ligase domain DGN07_15265 PF08245 Mur ligase middle domain DGN07_15280 PF00696 Amino acid kinase family DGN07_15280 PF01842 ACT domain DGN07_15285 PF02567 Phenazine biosynthesis-like protein DGN07_15290 PF02567 Phenazine biosynthesis-like protein DGN07_15300 PF02566 OsmC-like protein DGN07_15305 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DGN07_15305 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DGN07_15310 PF03652 Holliday junction resolvase DGN07_15315 PF02622 Uncharacterized ACR, COG1678 DGN07_15325 PF13673 Acetyltransferase (GNAT) domain DGN07_15325 PF13302 Acetyltransferase (GNAT) domain DGN07_15325 PF03352 Methyladenine glycosylase DGN07_15325 PF00117 Glutamine amidotransferase class-I DGN07_15325 PF00958 GMP synthase C terminal domain DGN07_15340 PF00437 Type II/IV secretion system protein DGN07_15345 PF00437 Type II/IV secretion system protein DGN07_15350 PF01168 Alanine racemase, N-terminal domain DGN07_15355 PF14748 Pyrroline-5-carboxylate reductase dimerisation DGN07_15355 PF03807 NADP oxidoreductase coenzyme F420-dependent DGN07_15365 PF01551 Peptidase family M23 DGN07_15385 PF01965 DJ-1/PfpI family DGN07_15395 PF02082 Transcriptional regulator DGN07_15400 PF01458 Uncharacterized protein family (UPF0051) DGN07_15405 PF00005 ABC transporter DGN07_15410 PF01458 Uncharacterized protein family (UPF0051) DGN07_15415 PF00266 Aminotransferase class-V DGN07_15425 PF00355 Rieske [2Fe-2S] domain DGN07_15430 PF00593 TonB dependent receptor DGN07_15430 PF07715 TonB-dependent Receptor Plug Domain DGN07_15435 PF13640 2OG-Fe(II) oxygenase superfamily DGN07_15435 PF18331 PKHD-type hydroxylase C-terminal domain DGN07_15460 PF02424 ApbE family DGN07_15465 PF00258 Flavodoxin DGN07_15465 PF00667 FAD binding domain DGN07_15465 PF00175 Oxidoreductase NAD-binding domain DGN07_15490 PF01636 Phosphotransferase enzyme family DGN07_15495 PF00483 Nucleotidyl transferase DGN07_15505 PF00308 Bacterial dnaA protein DGN07_15510 PF01594 AI-2E family transporter DGN07_15520 PF00586 AIR synthase related protein, N-terminal domain DGN07_15520 PF02769 AIR synthase related protein, C-terminal domain DGN07_15530 PF00551 Formyl transferase DGN07_15550 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DGN07_15555 PF01722 BolA-like protein DGN07_15560 PF01380 SIS domain DGN07_15560 PF00571 CBS domain DGN07_15575 PF03968 OstA-like protein DGN07_15580 PF00005 ABC transporter DGN07_15585 PF00309 Sigma-54 factor, Activator interacting domain (AID) DGN07_15585 PF04963 Sigma-54 factor, core binding domain DGN07_15585 PF04552 Sigma-54, DNA binding domain DGN07_15590 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DGN07_15595 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DGN07_15600 PF07475 HPr Serine kinase C-terminal domain DGN07_15600 PF02603 HPr Serine kinase N terminus DGN07_15605 PF03668 P-loop ATPase protein family DGN07_15615 PF00381 PTS HPr component phosphorylation site DGN07_15620 PF05524 PEP-utilising enzyme, N-terminal DGN07_15620 PF00391 PEP-utilising enzyme, mobile domain DGN07_15620 PF02896 PEP-utilising enzyme, TIM barrel domain DGN07_15630 PF00571 CBS domain DGN07_15630 PF01769 Divalent cation transporter DGN07_15630 PF03448 MgtE intracellular N domain DGN07_15635 PF00756 Putative esterase DGN07_15640 PF02322 Cytochrome bd terminal oxidase subunit II DGN07_15645 PF01654 Cytochrome bd terminal oxidase subunit I DGN07_15655 PF00324 Amino acid permease DGN07_15665 PF00872 Transposase, Mutator family DGN07_15680 PF00561 alpha/beta hydrolase fold DGN07_15690 PF00196 Bacterial regulatory proteins, luxR family DGN07_15695 PF00324 Amino acid permease DGN07_15730 PF12706 Beta-lactamase superfamily domain DGN07_15740 PF04820 Tryptophan halogenase DGN07_15800 PF00376 MerR family regulatory protein DGN07_15800 PF09278 MerR, DNA binding DGN07_15805 PF07690 Major Facilitator Superfamily DGN07_15820 PF03738 Glutathionylspermidine synthase preATP-grasp DGN07_15845 PF04012 PspA/IM30 family DGN07_15855 PF01243 Pyridoxamine 5'-phosphate oxidase DGN07_15855 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DGN07_15860 PF01202 Shikimate kinase DGN07_15865 PF01761 3-dehydroquinate synthase DGN07_15875 PF01208 Uroporphyrinogen decarboxylase (URO-D) DGN07_15880 PF07690 Major Facilitator Superfamily DGN07_15885 PF00512 His Kinase A (phospho-acceptor) domain DGN07_15885 PF01627 Hpt domain DGN07_15885 PF00072 Response regulator receiver domain DGN07_15885 PF00672 HAMP domain DGN07_15885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_15885 PF17149 Periplasmic sensor domain found in signal transduction proteins DGN07_15890 PF17149 Periplasmic sensor domain found in signal transduction proteins DGN07_15890 PF00672 HAMP domain DGN07_15890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_15890 PF00512 His Kinase A (phospho-acceptor) domain DGN07_15890 PF01627 Hpt domain DGN07_15890 PF00072 Response regulator receiver domain DGN07_15900 PF00072 Response regulator receiver domain DGN07_15900 PF00512 His Kinase A (phospho-acceptor) domain DGN07_15900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_15900 PF01627 Hpt domain DGN07_15905 PF04264 YceI-like domain DGN07_15925 PF03313 Serine dehydratase alpha chain DGN07_15925 PF03315 Serine dehydratase beta chain DGN07_15930 PF12697 Alpha/beta hydrolase family DGN07_15940 PF03447 Homoserine dehydrogenase, NAD binding domain DGN07_15940 PF00742 Homoserine dehydrogenase DGN07_15940 PF00696 Amino acid kinase family DGN07_15945 PF01053 Cys/Met metabolism PLP-dependent enzyme DGN07_15950 PF00561 alpha/beta hydrolase fold DGN07_15955 PF01476 LysM domain DGN07_15955 PF08525 Opacity-associated protein A N-terminal motif DGN07_15955 PF01551 Peptidase family M23 DGN07_15960 PF00009 Elongation factor Tu GTP binding domain DGN07_15960 PF16658 Class II release factor RF3, C-terminal domain DGN07_15965 PF03006 Haemolysin-III related DGN07_15970 PF05170 AsmA family DGN07_15975 PF00571 CBS domain DGN07_15975 PF00478 IMP dehydrogenase / GMP reductase domain DGN07_15980 PF00535 Glycosyl transferase family 2 DGN07_15985 PF00912 Transglycosylase DGN07_15990 PF01430 Hsp33 protein DGN07_16000 PF07715 TonB-dependent Receptor Plug Domain DGN07_16000 PF00593 TonB dependent receptor DGN07_16005 PF00872 Transposase, Mutator family DGN07_16015 PF05598 Transposase domain (DUF772) DGN07_16015 PF01609 Transposase DDE domain DGN07_16020 PF00440 Bacterial regulatory proteins, tetR family DGN07_16025 PF00561 alpha/beta hydrolase fold DGN07_16030 PF09317 Domain of unknown function (DUF1974) DGN07_16030 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DGN07_16030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DGN07_16055 PF00872 Transposase, Mutator family DGN07_16080 PF01597 Glycine cleavage H-protein DGN07_16085 PF01571 Aminomethyltransferase folate-binding domain DGN07_16085 PF08669 Glycine cleavage T-protein C-terminal barrel domain DGN07_16100 PF02694 Uncharacterised BCR, YnfA/UPF0060 family DGN07_16105 PF03819 MazG nucleotide pyrophosphohydrolase domain DGN07_16110 PF00459 Inositol monophosphatase family DGN07_16115 PF00293 NUDIX domain DGN07_16120 PF00202 Aminotransferase class-III DGN07_16125 PF04452 RNA methyltransferase DGN07_16130 PF02685 Glucokinase DGN07_16145 PF00704 Glycosyl hydrolases family 18 DGN07_16145 PF01476 LysM domain DGN07_16160 PF14310 Fibronectin type III-like domain DGN07_16160 PF00933 Glycosyl hydrolase family 3 N terminal domain DGN07_16160 PF01915 Glycosyl hydrolase family 3 C-terminal domain DGN07_16160 PF07691 PA14 domain DGN07_16180 PF13520 Amino acid permease DGN07_16190 PF02056 Family 4 glycosyl hydrolase DGN07_16190 PF11975 Family 4 glycosyl hydrolase C-terminal domain DGN07_16200 PF17678 Glycosyl hydrolase family 92 N-terminal domain DGN07_16200 PF07971 Glycosyl hydrolase family 92 DGN07_16205 PF01301 Glycosyl hydrolases family 35 DGN07_16240 PF03932 CutC family DGN07_16245 PF01112 Asparaginase DGN07_16255 PF13302 Acetyltransferase (GNAT) domain DGN07_16270 PF00072 Response regulator receiver domain DGN07_16270 PF01627 Hpt domain DGN07_16270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_16270 PF02895 Signal transducing histidine kinase, homodimeric domain DGN07_16270 PF01584 CheW-like domain DGN07_16275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN07_16275 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term DGN07_16280 PF01584 CheW-like domain DGN07_16285 PF00072 Response regulator receiver domain DGN07_16290 PF00072 Response regulator receiver domain DGN07_16295 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain DGN07_16295 PF02951 Prokaryotic glutathione synthetase, N-terminal domain DGN07_16305 PF03747 ADP-ribosylglycohydrolase DGN07_16310 PF00814 Glycoprotease family DGN07_16315 PF13307 Helicase C-terminal domain DGN07_16315 PF04851 Type III restriction enzyme, res subunit DGN07_16325 PF00912 Transglycosylase DGN07_16325 PF00905 Penicillin binding protein transpeptidase domain DGN07_16325 PF14814 Bifunctional transglycosylase second domain DGN07_16330 PF00535 Glycosyl transferase family 2 DGN07_16350 PF02824 TGS domain DGN07_16350 PF04607 Region found in RelA / SpoT proteins DGN07_16350 PF13291 ACT domain DGN07_16355 PF08042 PqqA family DGN07_16360 PF12706 Beta-lactamase superfamily domain DGN07_16365 PF03070 TENA/THI-4/PQQC family DGN07_16370 PF05402 Coenzyme PQQ synthesis protein D (PqqD) DGN07_16375 PF13186 Iron-sulfur cluster-binding domain DGN07_16375 PF04055 Radical SAM superfamily DGN07_16390 PF02685 Glucokinase DGN07_16400 PF00271 Helicase conserved C-terminal domain DGN07_16400 PF11898 Domain of unknown function (DUF3418) DGN07_16400 PF04408 Helicase associated domain (HA2) DGN07_16400 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DGN07_16400 PF00270 DEAD/DEAH box helicase DGN07_16405 PF00210 Ferritin-like domain DGN07_16410 PF00270 DEAD/DEAH box helicase DGN07_16410 PF00271 Helicase conserved C-terminal domain DGN07_16410 PF00570 HRDC domain DGN07_16410 PF16124 RecQ zinc-binding DGN07_16410 PF09382 RQC domain DGN07_16450 PF02203 Tar ligand binding domain homologue DGN07_16450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN07_16450 PF00672 HAMP domain DGN07_16455 PF01810 LysE type translocator DGN07_16460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN07_16460 PF03466 LysR substrate binding domain DGN07_16470 PF07536 HWE histidine kinase DGN07_16470 PF13426 PAS domain DGN07_16470 PF13581 Histidine kinase-like ATPase domain DGN07_16475 PF06508 Queuosine biosynthesis protein QueC DGN07_16485 PF04055 Radical SAM superfamily DGN07_16495 PF00691 OmpA family DGN07_16500 PF04052 TolB amino-terminal domain DGN07_16500 PF07676 WD40-like Beta Propeller Repeat DGN07_16510 PF02472 Biopolymer transport protein ExbD/TolR DGN07_16515 PF01618 MotA/TolQ/ExbB proton channel family DGN07_16520 PF03061 Thioesterase superfamily DGN07_16525 PF17864 RuvB AAA lid domain DGN07_16525 PF05496 Holliday junction DNA helicase RuvB P-loop domain DGN07_16525 PF05491 RuvB C-terminal winged helix domain DGN07_16535 PF02705 K+ potassium transporter DGN07_16540 PF01330 RuvA N terminal domain DGN07_16540 PF07499 RuvA, C-terminal domain DGN07_16545 PF02075 Crossover junction endodeoxyribonuclease RuvC DGN07_16550 PF01709 Transcriptional regulator DGN07_16565 PF02938 GAD domain DGN07_16565 PF00152 tRNA synthetases class II (D, K and N) DGN07_16565 PF01336 OB-fold nucleic acid binding domain DGN07_16580 PF07690 Major Facilitator Superfamily DGN07_16590 PF05506 Domain of unknown function (DUF756) DGN07_16590 PF04185 Phosphoesterase family DGN07_16610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN07_16610 PF03466 LysR substrate binding domain DGN07_16620 PF12848 ABC transporter DGN07_16620 PF00005 ABC transporter DGN07_16625 PF00593 TonB dependent receptor DGN07_16625 PF07715 TonB-dependent Receptor Plug Domain DGN07_16640 PF07715 TonB-dependent Receptor Plug Domain DGN07_16640 PF00593 TonB dependent receptor DGN07_16645 PF07715 TonB-dependent Receptor Plug Domain DGN07_16645 PF00593 TonB dependent receptor DGN07_16660 PF00999 Sodium/hydrogen exchanger family DGN07_16660 PF02254 TrkA-N domain DGN07_16670 PF07660 Secretin and TonB N terminus short domain DGN07_16670 PF07715 TonB-dependent Receptor Plug Domain DGN07_16670 PF00593 TonB dependent receptor DGN07_16680 PF06276 Ferric iron reductase FhuF-like transporter DGN07_16680 PF04183 IucA / IucC family DGN07_16685 PF07690 Major Facilitator Superfamily DGN07_16690 PF06276 Ferric iron reductase FhuF-like transporter DGN07_16690 PF04183 IucA / IucC family DGN07_16695 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DGN07_16695 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DGN07_16710 PF02654 Cobalamin-5-phosphate synthase DGN07_16720 PF02277 Phosphoribosyltransferase DGN07_16725 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase DGN07_16730 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DGN07_16730 PF07685 CobB/CobQ-like glutamine amidotransferase domain DGN07_16740 PF03186 CobD/Cbib protein DGN07_16740 PF17113 Regulatory signalling modulator protein AmpE DGN07_16745 PF12557 Cob(I)alamin adenosyltransferase N terminal DGN07_16745 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP DGN07_16765 PF07715 TonB-dependent Receptor Plug Domain DGN07_16765 PF00593 TonB dependent receptor DGN07_16770 PF07724 AAA domain (Cdc48 subfamily) DGN07_16770 PF10431 C-terminal, D2-small domain, of ClpB protein DGN07_16770 PF00004 ATPase family associated with various cellular activities (AAA) DGN07_16770 PF02861 Clp amino terminal domain, pathogenicity island component DGN07_16770 PF17871 AAA lid domain DGN07_16775 PF00005 ABC transporter DGN07_16780 PF00528 Binding-protein-dependent transport system inner membrane component DGN07_16785 PF09084 NMT1/THI5 like DGN07_16790 PF00248 Aldo/keto reductase family DGN07_16795 PF00296 Luciferase-like monooxygenase DGN07_16800 PF07715 TonB-dependent Receptor Plug Domain DGN07_16800 PF00593 TonB dependent receptor DGN07_16805 PF01541 GIY-YIG catalytic domain DGN07_16840 PF00593 TonB dependent receptor DGN07_16840 PF07715 TonB-dependent Receptor Plug Domain DGN07_16845 PF02358 Trehalose-phosphatase DGN07_16850 PF00723 Glycosyl hydrolases family 15 DGN07_16855 PF00982 Glycosyltransferase family 20 DGN07_16860 PF01011 PQQ enzyme repeat DGN07_16870 PF00672 HAMP domain DGN07_16870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN07_16870 PF02203 Tar ligand binding domain homologue DGN07_16875 PF04134 Protein of unknown function, DUF393 DGN07_16885 PF02578 Multi-copper polyphenol oxidoreductase laccase DGN07_16890 PF00849 RNA pseudouridylate synthase DGN07_16895 PF13525 Outer membrane lipoprotein DGN07_16905 PF02540 NAD synthase DGN07_16905 PF00795 Carbon-nitrogen hydrolase DGN07_16920 PF00549 CoA-ligase DGN07_16920 PF02629 CoA binding domain DGN07_16925 PF08442 ATP-grasp domain DGN07_16925 PF00549 CoA-ligase DGN07_16930 PF00512 His Kinase A (phospho-acceptor) domain DGN07_16930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_16935 PF02954 Bacterial regulatory protein, Fis family DGN07_16935 PF00072 Response regulator receiver domain DGN07_16935 PF00158 Sigma-54 interaction domain DGN07_16945 PF00437 Type II/IV secretion system protein DGN07_16945 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DGN07_16950 PF07963 Prokaryotic N-terminal methylation motif DGN07_16950 PF00114 Pilin (bacterial filament) DGN07_16955 PF00114 Pilin (bacterial filament) DGN07_16955 PF07963 Prokaryotic N-terminal methylation motif DGN07_16960 PF00482 Type II secretion system (T2SS), protein F DGN07_16965 PF01478 Type IV leader peptidase family DGN07_16965 PF06750 Bacterial Peptidase A24 N-terminal domain DGN07_16970 PF01121 Dephospho-CoA kinase DGN07_16975 PF05598 Transposase domain (DUF772) DGN07_16975 PF01609 Transposase DDE domain DGN07_16980 PF00872 Transposase, Mutator family DGN07_16990 PF01609 Transposase DDE domain DGN07_16990 PF05598 Transposase domain (DUF772) DGN07_17000 PF11808 Phosphate regulon sensor protein PhoR DGN07_17000 PF00989 PAS fold DGN07_17000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_17000 PF00512 His Kinase A (phospho-acceptor) domain DGN07_17005 PF00486 Transcriptional regulatory protein, C terminal DGN07_17005 PF00072 Response regulator receiver domain DGN07_17015 PF08443 RimK-like ATP-grasp domain DGN07_17015 PF18030 RimK PreATP-grasp domain DGN07_17020 PF00128 Alpha amylase, catalytic domain DGN07_17020 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DGN07_17035 PF00872 Transposase, Mutator family DGN07_17070 PF01609 Transposase DDE domain DGN07_17070 PF05598 Transposase domain (DUF772) DGN07_17090 PF00872 Transposase, Mutator family DGN07_17105 PF05598 Transposase domain (DUF772) DGN07_17105 PF01609 Transposase DDE domain DGN07_17110 PF00872 Transposase, Mutator family DGN07_17135 PF05598 Transposase domain (DUF772) DGN07_17135 PF01609 Transposase DDE domain DGN07_17160 PF04002 RadC-like JAB domain DGN07_17190 PF00872 Transposase, Mutator family DGN07_17205 PF01609 Transposase DDE domain DGN07_17205 PF05598 Transposase domain (DUF772) DGN07_17220 PF03466 LysR substrate binding domain DGN07_17220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN07_17225 PF01381 Helix-turn-helix DGN07_17250 PF05598 Transposase domain (DUF772) DGN07_17250 PF01609 Transposase DDE domain DGN07_17265 PF00872 Transposase, Mutator family DGN07_17275 PF14659 Phage integrase, N-terminal SAM-like domain DGN07_17275 PF13356 Arm DNA-binding domain DGN07_17275 PF00589 Phage integrase family DGN07_17285 PF00657 GDSL-like Lipase/Acylhydrolase DGN07_17285 PF03797 Autotransporter beta-domain DGN07_17295 PF05690 Thiazole biosynthesis protein ThiG DGN07_17300 PF02390 Putative methyltransferase DGN07_17305 PF03600 Citrate transporter DGN07_17305 PF02080 TrkA-C domain DGN07_17325 PF01557 Fumarylacetoacetate (FAA) hydrolase family DGN07_17330 PF01741 Large-conductance mechanosensitive channel, MscL DGN07_17340 PF00356 Bacterial regulatory proteins, lacI family DGN07_17360 PF00135 Carboxylesterase family DGN07_17365 PF00588 SpoU rRNA Methylase family DGN07_17365 PF08032 RNA 2'-O ribose methyltransferase substrate binding DGN07_17375 PF01433 Peptidase family M1 domain DGN07_17375 PF11838 ERAP1-like C-terminal domain DGN07_17380 PF00873 AcrB/AcrD/AcrF family DGN07_17385 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGN07_17385 PF00529 HlyD membrane-fusion protein of T1SS DGN07_17390 PF00009 Elongation factor Tu GTP binding domain DGN07_17395 PF01507 Phosphoadenosine phosphosulfate reductase family DGN07_17400 PF00175 Oxidoreductase NAD-binding domain DGN07_17400 PF00258 Flavodoxin DGN07_17400 PF00667 FAD binding domain DGN07_17405 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DGN07_17405 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DGN07_17410 PF01507 Phosphoadenosine phosphosulfate reductase family DGN07_17415 PF01609 Transposase DDE domain DGN07_17415 PF05598 Transposase domain (DUF772) DGN07_17435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_17435 PF00512 His Kinase A (phospho-acceptor) domain DGN07_17435 PF01627 Hpt domain DGN07_17435 PF00072 Response regulator receiver domain DGN07_17450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN07_17450 PF03466 LysR substrate binding domain DGN07_17455 PF10414 Sirohaem synthase dimerisation region DGN07_17455 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DGN07_17455 PF14824 Sirohaem biosynthesis protein central DGN07_17460 PF00291 Pyridoxal-phosphate dependent enzyme DGN07_17470 PF01661 Macro domain DGN07_17475 PF00274 Fructose-bisphosphate aldolase class-I DGN07_17490 PF00224 Pyruvate kinase, barrel domain DGN07_17490 PF02887 Pyruvate kinase, alpha/beta domain DGN07_17495 PF13419 Haloacid dehalogenase-like hydrolase DGN07_17500 PF00162 Phosphoglycerate kinase DGN07_17530 PF00872 Transposase, Mutator family DGN07_17545 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DGN07_17545 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DGN07_17555 PF03922 OmpW family DGN07_17560 PF03922 OmpW family DGN07_17570 PF04273 Putative phosphatase (DUF442) DGN07_17570 PF00753 Metallo-beta-lactamase superfamily DGN07_17580 PF00528 Binding-protein-dependent transport system inner membrane component DGN07_17585 PF00005 ABC transporter DGN07_17585 PF03459 TOBE domain DGN07_17620 PF01476 LysM domain DGN07_17620 PF03734 L,D-transpeptidase catalytic domain DGN07_17625 PF01551 Peptidase family M23 DGN07_17625 PF04225 Opacity-associated protein A LysM-like domain DGN07_17630 PF07715 TonB-dependent Receptor Plug Domain DGN07_17630 PF00593 TonB dependent receptor DGN07_17640 PF02780 Transketolase, C-terminal domain DGN07_17640 PF00456 Transketolase, thiamine diphosphate binding domain DGN07_17640 PF02779 Transketolase, pyrimidine binding domain DGN07_17645 PF00375 Sodium:dicarboxylate symporter family DGN07_17650 PF00872 Transposase, Mutator family DGN07_17675 PF07584 Aerotolerance regulator N-terminal DGN07_17675 PF00092 von Willebrand factor type A domain DGN07_17695 PF17863 AAA lid domain DGN07_17695 PF07726 ATPase family associated with various cellular activities (AAA) DGN07_17705 PF07660 Secretin and TonB N terminus short domain DGN07_17705 PF11741 AMIN domain DGN07_17705 PF00263 Bacterial type II and III secretion system protein DGN07_17705 PF03958 Bacterial type II/III secretion system short domain DGN07_17710 PF04351 Pilus assembly protein, PilP DGN07_17715 PF04350 Pilus assembly protein, PilO DGN07_17720 PF05137 Fimbrial assembly protein (PilN) DGN07_17725 PF11104 Type IV pilus assembly protein PilM; DGN07_17730 PF17092 Penicillin-binding protein OB-like domain DGN07_17730 PF00905 Penicillin binding protein transpeptidase domain DGN07_17730 PF00912 Transglycosylase DGN07_17740 PF00285 Citrate synthase, C-terminal domain DGN07_17745 PF01197 Ribosomal protein L31 DGN07_17750 PF01156 Inosine-uridine preferring nucleoside hydrolase DGN07_17755 PF00270 DEAD/DEAH box helicase DGN07_17755 PF00271 Helicase conserved C-terminal domain DGN07_17755 PF17191 RecG wedge domain DGN07_17760 PF01042 Endoribonuclease L-PSP DGN07_17765 PF08666 SAF domain DGN07_17765 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus DGN07_17770 PF03573 outer membrane porin, OprD family DGN07_17775 PF13378 Enolase C-terminal domain-like DGN07_17775 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DGN07_17780 PF07690 Major Facilitator Superfamily DGN07_17785 PF00171 Aldehyde dehydrogenase family DGN07_17790 PF00701 Dihydrodipicolinate synthetase family DGN07_17795 PF03466 LysR substrate binding domain DGN07_17795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN07_17800 PF13291 ACT domain DGN07_17800 PF02824 TGS domain DGN07_17800 PF04607 Region found in RelA / SpoT proteins DGN07_17805 PF01192 RNA polymerase Rpb6 DGN07_17810 PF00625 Guanylate kinase DGN07_17815 PF08340 Domain of unknown function (DUF1732) DGN07_17815 PF03755 YicC-like family, N-terminal region DGN07_17820 PF01138 3' exoribonuclease family, domain 1 DGN07_17820 PF03725 3' exoribonuclease family, domain 2 DGN07_17830 PF01725 Ham1 family DGN07_17835 PF06969 HemN C-terminal domain DGN07_17835 PF04055 Radical SAM superfamily DGN07_17850 PF00557 Metallopeptidase family M24 DGN07_17860 PF05195 Aminopeptidase P, N-terminal domain DGN07_17860 PF00557 Metallopeptidase family M24 DGN07_17865 PF03695 Uncharacterised protein family (UPF0149) DGN07_17875 PF05164 Cell division protein ZapA DGN07_17885 PF01812 5-formyltetrahydrofolate cyclo-ligase family DGN07_17895 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DGN07_17905 PF13369 Transglutaminase-like superfamily DGN07_17915 PF00301 Rubredoxin DGN07_17920 PF02581 Thiamine monophosphate synthase DGN07_17940 PF00202 Aminotransferase class-III DGN07_17945 PF00196 Bacterial regulatory proteins, luxR family DGN07_17945 PF17874 MalT-like TPR region DGN07_17950 PF00127 Copper binding proteins, plastocyanin/azurin family DGN07_17955 PF00155 Aminotransferase class I and II DGN07_17965 PF00034 Cytochrome c DGN07_17965 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DGN07_17970 PF01593 Flavin containing amine oxidoreductase DGN07_17990 PF00202 Aminotransferase class-III DGN07_17995 PF00520 Ion transport protein DGN07_17995 PF00027 Cyclic nucleotide-binding domain DGN07_18010 PF01569 PAP2 superfamily DGN07_18020 PF01062 Bestrophin, RFP-TM, chloride channel DGN07_18030 PF01225 Mur ligase family, catalytic domain DGN07_18030 PF02875 Mur ligase family, glutamate ligase domain DGN07_18030 PF08245 Mur ligase middle domain DGN07_18040 PF00365 Phosphofructokinase DGN07_18050 PF03030 Inorganic H+ pyrophosphatase DGN07_18060 PF00719 Inorganic pyrophosphatase DGN07_18070 PF00593 TonB dependent receptor DGN07_18070 PF07715 TonB-dependent Receptor Plug Domain DGN07_18085 PF13667 ThiC-associated domain DGN07_18085 PF01964 Radical SAM ThiC family DGN07_18095 PF07715 TonB-dependent Receptor Plug Domain DGN07_18095 PF00593 TonB dependent receptor DGN07_18100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN07_18100 PF02203 Tar ligand binding domain homologue DGN07_18100 PF00672 HAMP domain DGN07_18110 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DGN07_18110 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DGN07_18115 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DGN07_18115 PF00205 Thiamine pyrophosphate enzyme, central domain DGN07_18115 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DGN07_18125 PF00291 Pyridoxal-phosphate dependent enzyme DGN07_18130 PF00682 HMGL-like DGN07_18130 PF08502 LeuA allosteric (dimerisation) domain DGN07_18135 PF00180 Isocitrate/isopropylmalate dehydrogenase DGN07_18140 PF00694 Aconitase C-terminal domain DGN07_18150 PF00330 Aconitase family (aconitate hydratase) DGN07_18155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN07_18160 PF00990 Diguanylate cyclase, GGDEF domain DGN07_18175 PF02321 Outer membrane efflux protein DGN07_18180 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DGN07_18185 PF03279 Bacterial lipid A biosynthesis acyltransferase DGN07_18210 PF00390 Malic enzyme, N-terminal domain DGN07_18210 PF03949 Malic enzyme, NAD binding domain DGN07_18210 PF01515 Phosphate acetyl/butaryl transferase DGN07_18215 PF00375 Sodium:dicarboxylate symporter family DGN07_18225 PF00512 His Kinase A (phospho-acceptor) domain DGN07_18225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_18225 PF02743 Cache domain DGN07_18230 PF07690 Major Facilitator Superfamily DGN07_18240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN07_18240 PF03466 LysR substrate binding domain DGN07_18245 PF00248 Aldo/keto reductase family DGN07_18260 PF00072 Response regulator receiver domain DGN07_18260 PF00196 Bacterial regulatory proteins, luxR family DGN07_18270 PF08521 Two-component sensor kinase N-terminal DGN07_18270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_18270 PF00512 His Kinase A (phospho-acceptor) domain DGN07_18275 PF00486 Transcriptional regulatory protein, C terminal DGN07_18275 PF00072 Response regulator receiver domain DGN07_18290 PF03600 Citrate transporter DGN07_18295 PF00106 short chain dehydrogenase DGN07_18310 PF05598 Transposase domain (DUF772) DGN07_18310 PF01609 Transposase DDE domain DGN07_18315 PF00356 Bacterial regulatory proteins, lacI family DGN07_18330 PF00128 Alpha amylase, catalytic domain DGN07_18350 PF03193 RsgA GTPase DGN07_18355 PF00155 Aminotransferase class I and II DGN07_18370 PF01522 Polysaccharide deacetylase DGN07_18375 PF00462 Glutaredoxin DGN07_18390 PF01979 Amidohydrolase family DGN07_18395 PF01979 Amidohydrolase family DGN07_18415 PF01609 Transposase DDE domain DGN07_18415 PF05598 Transposase domain (DUF772) DGN07_18420 PF02645 Uncharacterised protein, DegV family COG1307 DGN07_18425 PF01327 Polypeptide deformylase DGN07_18435 PF03960 ArsC family DGN07_18450 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) DGN07_18455 PF01270 Glycosyl hydrolases family 8 DGN07_18460 PF03170 Bacterial cellulose synthase subunit DGN07_18465 PF00535 Glycosyl transferase family 2 DGN07_18465 PF03552 Cellulose synthase DGN07_18465 PF07238 PilZ domain DGN07_18480 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DGN07_18480 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DGN07_18525 PF07715 TonB-dependent Receptor Plug Domain DGN07_18525 PF00593 TonB dependent receptor DGN07_18535 PF00392 Bacterial regulatory proteins, gntR family DGN07_18535 PF07702 UTRA domain DGN07_18545 PF00263 Bacterial type II and III secretion system protein DGN07_18545 PF03958 Bacterial type II/III secretion system short domain DGN07_18555 PF10741 Type II secretion system (T2SS), protein M subtype b DGN07_18560 PF05137 Fimbrial assembly protein (PilN) DGN07_18565 PF03934 Type II secretion system (T2SS), protein K DGN07_18575 PF07963 Prokaryotic N-terminal methylation motif DGN07_18580 PF12019 Type II transport protein GspH DGN07_18585 PF08334 Type II secretion system (T2SS), protein G DGN07_18590 PF00482 Type II secretion system (T2SS), protein F DGN07_18600 PF00437 Type II/IV secretion system protein DGN07_18600 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DGN07_18605 PF00082 Subtilase family DGN07_18605 PF04151 Bacterial pre-peptidase C-terminal domain DGN07_18615 PF00082 Subtilase family DGN07_18615 PF04151 Bacterial pre-peptidase C-terminal domain DGN07_18620 PF13018 Extended Signal Peptide of Type V secretion system DGN07_18620 PF05658 Head domain of trimeric autotransporter adhesin DGN07_18620 PF05662 Coiled stalk of trimeric autotransporter adhesin DGN07_18620 PF03895 YadA-like membrane anchor domain DGN07_18625 PF02769 AIR synthase related protein, C-terminal domain DGN07_18625 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DGN07_18625 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal DGN07_18635 PF13098 Thioredoxin-like domain DGN07_18635 PF10411 Disulfide bond isomerase protein N-terminus DGN07_18650 PF00589 Phage integrase family DGN07_18650 PF02899 Phage integrase, N-terminal SAM-like domain DGN07_18665 PF03739 Lipopolysaccharide export system permease LptF/LptG DGN07_18675 PF00883 Cytosol aminopeptidase family, catalytic domain DGN07_18675 PF02789 Cytosol aminopeptidase family, N-terminal domain DGN07_18690 PF08264 Anticodon-binding domain of tRNA DGN07_18690 PF00133 tRNA synthetases class I (I, L, M and V) DGN07_18690 PF10458 Valyl tRNA synthetase tRNA binding arm DGN07_18700 PF07715 TonB-dependent Receptor Plug Domain DGN07_18700 PF00593 TonB dependent receptor DGN07_18705 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain DGN07_18705 PF01464 Transglycosylase SLT domain DGN07_18715 PF00872 Transposase, Mutator family DGN07_18735 PF01066 CDP-alcohol phosphatidyltransferase DGN07_18745 PF04073 Aminoacyl-tRNA editing domain DGN07_18745 PF03129 Anticodon binding domain DGN07_18745 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DGN07_18750 PF00816 H-NS histone family DGN07_18760 PF02405 Permease MlaE DGN07_18765 PF00005 ABC transporter DGN07_18770 PF03886 ABC-type transport auxiliary lipoprotein component DGN07_18770 PF02470 MlaD protein DGN07_18790 PF01144 Coenzyme A transferase DGN07_18795 PF01144 Coenzyme A transferase DGN07_18800 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DGN07_18800 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DGN07_18800 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DGN07_18800 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DGN07_18805 PF01050 Mannose-6-phosphate isomerase DGN07_18805 PF00483 Nucleotidyl transferase DGN07_18810 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DGN07_18810 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DGN07_18810 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DGN07_18815 PF04321 RmlD substrate binding domain DGN07_18820 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DGN07_18825 PF00483 Nucleotidyl transferase DGN07_18830 PF16363 GDP-mannose 4,6 dehydratase DGN07_18835 PF01012 Electron transfer flavoprotein domain DGN07_18840 PF01012 Electron transfer flavoprotein domain DGN07_18840 PF00766 Electron transfer flavoprotein FAD-binding domain DGN07_18850 PF00535 Glycosyl transferase family 2 DGN07_18860 PF01593 Flavin containing amine oxidoreductase DGN07_18875 PF16363 GDP-mannose 4,6 dehydratase DGN07_18880 PF16363 GDP-mannose 4,6 dehydratase DGN07_18885 PF00534 Glycosyl transferases group 1 DGN07_18885 PF13477 Glycosyl transferase 4-like DGN07_18890 PF00069 Protein kinase domain DGN07_18890 PF13847 Methyltransferase domain DGN07_18895 PF00005 ABC transporter DGN07_18905 PF00534 Glycosyl transferases group 1 DGN07_18905 PF13439 Glycosyltransferase Family 4 DGN07_18915 PF01053 Cys/Met metabolism PLP-dependent enzyme DGN07_18920 PF00571 CBS domain DGN07_18920 PF00291 Pyridoxal-phosphate dependent enzyme DGN07_18940 PF00437 Type II/IV secretion system protein DGN07_18945 PF02798 Glutathione S-transferase, N-terminal domain DGN07_18945 PF14497 Glutathione S-transferase, C-terminal domain DGN07_18960 PF00270 DEAD/DEAH box helicase DGN07_18960 PF00271 Helicase conserved C-terminal domain DGN07_18970 PF00593 TonB dependent receptor DGN07_18970 PF07715 TonB-dependent Receptor Plug Domain DGN07_18975 PF00872 Transposase, Mutator family DGN07_18985 PF01242 6-pyruvoyl tetrahydropterin synthase DGN07_19015 PF13185 GAF domain DGN07_19025 PF00756 Putative esterase DGN07_19030 PF00593 TonB dependent receptor DGN07_19030 PF07715 TonB-dependent Receptor Plug Domain DGN07_19035 PF13419 Haloacid dehalogenase-like hydrolase DGN07_19040 PF00817 impB/mucB/samB family DGN07_19040 PF11799 impB/mucB/samB family C-terminal domain DGN07_19045 PF07977 FabA-like domain DGN07_19050 PF00109 Beta-ketoacyl synthase, N-terminal domain DGN07_19050 PF02801 Beta-ketoacyl synthase, C-terminal domain DGN07_19060 PF01432 Peptidase family M3 DGN07_19075 PF07731 Multicopper oxidase DGN07_19075 PF07732 Multicopper oxidase DGN07_19075 PF00394 Multicopper oxidase DGN07_19080 PF05275 Copper resistance protein B precursor (CopB) DGN07_19085 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DGN07_19110 PF01380 SIS domain DGN07_19115 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGN07_19120 PF00005 ABC transporter DGN07_19125 PF02687 FtsX-like permease family DGN07_19125 PF12704 MacB-like periplasmic core domain DGN07_19130 PF00005 ABC transporter DGN07_19130 PF02687 FtsX-like permease family DGN07_19130 PF12704 MacB-like periplasmic core domain DGN07_19140 PF02954 Bacterial regulatory protein, Fis family DGN07_19140 PF00072 Response regulator receiver domain DGN07_19140 PF00158 Sigma-54 interaction domain DGN07_19145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_19145 PF00512 His Kinase A (phospho-acceptor) domain DGN07_19150 PF12804 MobA-like NTP transferase domain DGN07_19150 PF00132 Bacterial transferase hexapeptide (six repeats) DGN07_19150 PF14602 Hexapeptide repeat of succinyl-transferase DGN07_19170 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DGN07_19170 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DGN07_19175 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DGN07_19175 PF02874 ATP synthase alpha/beta family, beta-barrel domain DGN07_19180 PF00231 ATP synthase DGN07_19185 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DGN07_19185 PF00306 ATP synthase alpha/beta chain, C terminal domain DGN07_19185 PF02874 ATP synthase alpha/beta family, beta-barrel domain DGN07_19190 PF00213 ATP synthase delta (OSCP) subunit DGN07_19195 PF00430 ATP synthase B/B' CF(0) DGN07_19200 PF00137 ATP synthase subunit C DGN07_19205 PF00119 ATP synthase A chain DGN07_19225 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DGN07_19225 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGN07_19235 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DGN07_19235 PF02817 e3 binding domain DGN07_19235 PF00364 Biotin-requiring enzyme DGN07_19270 PF03180 NLPA lipoprotein DGN07_19275 PF00528 Binding-protein-dependent transport system inner membrane component DGN07_19280 PF09383 NIL domain DGN07_19280 PF00005 ABC transporter DGN07_19285 PF00892 EamA-like transporter family DGN07_19290 PF04461 Protein of unknown function (DUF520) DGN07_19300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_19300 PF00512 His Kinase A (phospho-acceptor) domain DGN07_19300 PF18415 Histidine kinase receptor ArcB trans-membrane domain DGN07_19300 PF01627 Hpt domain DGN07_19300 PF00989 PAS fold DGN07_19300 PF00072 Response regulator receiver domain DGN07_19330 PF00849 RNA pseudouridylate synthase DGN07_19330 PF01479 S4 domain DGN07_19335 PF08468 Methyltransferase small domain N-terminal DGN07_19335 PF05175 Methyltransferase small domain DGN07_19365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_19365 PF00989 PAS fold DGN07_19365 PF00512 His Kinase A (phospho-acceptor) domain DGN07_19385 PF00842 Alanine racemase, C-terminal domain DGN07_19385 PF01168 Alanine racemase, N-terminal domain DGN07_19390 PF01266 FAD dependent oxidoreductase DGN07_19395 PF01037 Lrp/AsnC ligand binding domain DGN07_19405 PF01641 SelR domain DGN07_19415 PF01618 MotA/TolQ/ExbB proton channel family DGN07_19420 PF13677 Membrane MotB of proton-channel complex MotA/MotB DGN07_19420 PF00691 OmpA family DGN07_19450 PF01061 ABC-2 type transporter DGN07_19455 PF00005 ABC transporter DGN07_19460 PF00999 Sodium/hydrogen exchanger family DGN07_19470 PF02469 Fasciclin domain DGN07_19475 PF03167 Uracil DNA glycosylase superfamily DGN07_19485 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DGN07_19495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN07_19495 PF03466 LysR substrate binding domain DGN07_19500 PF03358 NADPH-dependent FMN reductase DGN07_19505 PF00248 Aldo/keto reductase family DGN07_19535 PF13520 Amino acid permease DGN07_19545 PF00072 Response regulator receiver domain DGN07_19545 PF04397 LytTr DNA-binding domain DGN07_19550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_19550 PF00672 HAMP domain DGN07_19550 PF06580 Histidine kinase DGN07_19550 PF02743 Cache domain DGN07_19575 PF05974 Domain of unknown function (DUF892) DGN07_19580 PF05067 Manganese containing catalase DGN07_19600 PF03705 CheR methyltransferase, all-alpha domain DGN07_19600 PF01739 CheR methyltransferase, SAM binding domain DGN07_19600 PF01339 CheB methylesterase DGN07_19600 PF08448 PAS fold DGN07_19615 PF02954 Bacterial regulatory protein, Fis family DGN07_19615 PF00072 Response regulator receiver domain DGN07_19615 PF00158 Sigma-54 interaction domain DGN07_19630 PF01654 Cytochrome bd terminal oxidase subunit I DGN07_19635 PF02322 Cytochrome bd terminal oxidase subunit II DGN07_19655 PF16363 GDP-mannose 4,6 dehydratase DGN07_19665 PF03275 UDP-galactopyranose mutase DGN07_19675 PF00664 ABC transporter transmembrane region DGN07_19675 PF00005 ABC transporter DGN07_19690 PF08240 Alcohol dehydrogenase GroES-like domain DGN07_19690 PF00107 Zinc-binding dehydrogenase DGN07_19690 PF13823 Alcohol dehydrogenase GroES-associated DGN07_19735 PF00593 TonB dependent receptor DGN07_19735 PF07715 TonB-dependent Receptor Plug Domain DGN07_19750 PF00005 ABC transporter DGN07_19760 PF03466 LysR substrate binding domain DGN07_19760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN07_19765 PF01042 Endoribonuclease L-PSP DGN07_19795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN07_19795 PF03466 LysR substrate binding domain DGN07_19800 PF02525 Flavodoxin-like fold DGN07_19830 PF01740 STAS domain DGN07_19830 PF00916 Sulfate permease family DGN07_19840 PF00557 Metallopeptidase family M24 DGN07_19885 PF05598 Transposase domain (DUF772) DGN07_19885 PF01609 Transposase DDE domain DGN07_19910 PF00872 Transposase, Mutator family DGN07_19930 PF04542 Sigma-70 region 2 DGN07_19930 PF03979 Sigma-70 factor, region 1.1 DGN07_19930 PF00140 Sigma-70 factor, region 1.2 DGN07_19930 PF04539 Sigma-70 region 3 DGN07_19930 PF04545 Sigma-70, region 4 DGN07_19930 PF04546 Sigma-70, non-essential region DGN07_19935 PF02580 D-Tyr-tRNA(Tyr) deacylase DGN07_19940 PF03279 Bacterial lipid A biosynthesis acyltransferase DGN07_19960 PF00925 GTP cyclohydrolase II DGN07_19980 PF00535 Glycosyl transferase family 2 DGN07_19995 PF01189 16S rRNA methyltransferase RsmB/F DGN07_19995 PF01029 NusB family DGN07_20000 PF02911 Formyl transferase, C-terminal domain DGN07_20000 PF00551 Formyl transferase DGN07_20005 PF01327 Polypeptide deformylase DGN07_20010 PF01476 LysM domain DGN07_20015 PF17782 DprA winged helix domain DGN07_20015 PF02481 DNA recombination-mediator protein A DGN07_20020 PF04361 Protein of unknown function (DUF494) DGN07_20025 PF07963 Prokaryotic N-terminal methylation motif DGN07_20025 PF00114 Pilin (bacterial filament) DGN07_20035 PF01131 DNA topoisomerase DGN07_20035 PF01751 Toprim domain DGN07_20035 PF13368 Topoisomerase C-terminal repeat DGN07_20040 PF01300 Telomere recombination DGN07_20070 PF01343 Peptidase family S49 DGN07_20075 PF01554 MatE DGN07_20095 PF00270 DEAD/DEAH box helicase DGN07_20095 PF00271 Helicase conserved C-terminal domain DGN07_20095 PF17764 3′ DNA-binding domain (3′BD) DGN07_20095 PF18074 Primosomal protein N C-terminal domain DGN07_20095 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DGN07_20100 PF00043 Glutathione S-transferase, C-terminal domain DGN07_20100 PF13417 Glutathione S-transferase, N-terminal domain DGN07_20115 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGN07_20125 PF04542 Sigma-70 region 2 DGN07_20125 PF04545 Sigma-70, region 4 DGN07_20130 PF03167 Uracil DNA glycosylase superfamily DGN07_20135 PF00072 Response regulator receiver domain DGN07_20140 PF18075 FtsX extracellular domain DGN07_20145 PF00005 ABC transporter DGN07_20150 PF00270 DEAD/DEAH box helicase DGN07_20150 PF00271 Helicase conserved C-terminal domain DGN07_20150 PF12300 ATP-dependent RNA helicase RhlB DGN07_20155 PF00085 Thioredoxin DGN07_20160 PF07497 Rho termination factor, RNA-binding domain DGN07_20160 PF07498 Rho termination factor, N-terminal domain DGN07_20160 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DGN07_20165 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) DGN07_20170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN07_20170 PF03466 LysR substrate binding domain DGN07_20180 PF03971 Monomeric isocitrate dehydrogenase DGN07_20190 PF04972 BON domain DGN07_20190 PF01476 LysM domain DGN07_20195 PF14489 QueF-like protein DGN07_20195 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term DGN07_20200 PF07687 Peptidase dimerisation domain DGN07_20200 PF01546 Peptidase family M20/M25/M40 DGN07_20205 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGN07_20210 PF00873 AcrB/AcrD/AcrF family DGN07_20215 PF00873 AcrB/AcrD/AcrF family DGN07_20230 PF07063 Domain of unknown function (DUF1338) DGN07_20270 PF01427 D-ala-D-ala dipeptidase DGN07_20275 PF01510 N-acetylmuramoyl-L-alanine amidase DGN07_20285 PF13378 Enolase C-terminal domain-like DGN07_20285 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DGN07_20295 PF13520 Amino acid permease DGN07_20320 PF00872 Transposase, Mutator family DGN07_20330 PF07995 Glucose / Sorbosone dehydrogenase DGN07_20335 PF14310 Fibronectin type III-like domain DGN07_20335 PF00933 Glycosyl hydrolase family 3 N terminal domain DGN07_20335 PF01915 Glycosyl hydrolase family 3 C-terminal domain DGN07_20340 PF02152 Dihydroneopterin aldolase DGN07_20345 PF00814 Glycoprotease family DGN07_20350 PF01165 Ribosomal protein S21 DGN07_20355 PF09424 Yqey-like protein DGN07_20365 PF03631 Virulence factor BrkB DGN07_20370 PF01807 CHC2 zinc finger DGN07_20370 PF08275 DNA primase catalytic core, N-terminal domain DGN07_20370 PF08278 DNA primase DnaG DnaB-binding DGN07_20370 PF10410 DnaB-helicase binding domain of primase DGN07_20375 PF13593 SBF-like CPA transporter family (DUF4137) DGN07_20385 PF01040 UbiA prenyltransferase family DGN07_20410 PF00510 Cytochrome c oxidase subunit III DGN07_20415 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 DGN07_20425 PF00115 Cytochrome C and Quinol oxidase polypeptide I DGN07_20430 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DGN07_20430 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DGN07_20440 PF00171 Aldehyde dehydrogenase family DGN07_20440 PF01619 Proline dehydrogenase DGN07_20440 PF14850 DNA-binding domain of Proline dehydrogenase DGN07_20440 PF18327 Proline utilization A proline dehydrogenase N-terminal domain DGN07_20475 PF00579 tRNA synthetases class I (W and Y) DGN07_20480 PF01551 Peptidase family M23 DGN07_20480 PF04225 Opacity-associated protein A LysM-like domain DGN07_20485 PF03702 Anhydro-N-acetylmuramic acid kinase DGN07_20495 PF07690 Major Facilitator Superfamily DGN07_20500 PF03372 Endonuclease/Exonuclease/phosphatase family DGN07_20505 PF00156 Phosphoribosyl transferase domain DGN07_20515 PF13614 AAA domain DGN07_20520 PF17762 HTH domain found in ParB protein DGN07_20520 PF02195 ParB-like nuclease domain DGN07_20535 PF01370 NAD dependent epimerase/dehydratase family DGN07_20540 PF00535 Glycosyl transferase family 2 DGN07_20555 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DGN07_20555 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DGN07_20555 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DGN07_20555 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DGN07_20560 PF00692 dUTPase DGN07_20565 PF04127 DNA / pantothenate metabolism flavoprotein DGN07_20565 PF02441 Flavoprotein DGN07_20570 PF04002 RadC-like JAB domain DGN07_20575 PF05746 DALR anticodon binding domain DGN07_20575 PF00750 tRNA synthetases class I (R) DGN07_20575 PF03485 Arginyl tRNA synthetase N terminal domain DGN07_20590 PF00106 short chain dehydrogenase DGN07_20595 PF01757 Acyltransferase family DGN07_20600 PF03033 Glycosyltransferase family 28 N-terminal domain DGN07_20615 PF17810 Arginine decarboxylase helical bundle domain DGN07_20615 PF17944 Arginine decarboxylase C-terminal helical extension DGN07_20615 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DGN07_20620 PF17284 Spermidine synthase tetramerisation domain DGN07_20645 PF00963 Cohesin domain DGN07_20645 PF00754 F5/8 type C domain DGN07_20645 PF00041 Fibronectin type III domain DGN07_20645 PF02838 Glycosyl hydrolase family 20, domain 2 DGN07_20645 PF07555 beta-N-acetylglucosaminidase DGN07_20655 PF00543 Nitrogen regulatory protein P-II DGN07_20660 PF04380 Membrane fusogenic activity DGN07_20680 PF12792 CSS motif domain associated with EAL DGN07_20680 PF00563 EAL domain DGN07_20685 PF00487 Fatty acid desaturase DGN07_20690 PF00111 2Fe-2S iron-sulfur cluster binding domain DGN07_20690 PF00970 Oxidoreductase FAD-binding domain DGN07_20690 PF00175 Oxidoreductase NAD-binding domain DGN07_20695 PF00440 Bacterial regulatory proteins, tetR family DGN07_20715 PF05598 Transposase domain (DUF772) DGN07_20715 PF01609 Transposase DDE domain DGN07_20725 PF01139 tRNA-splicing ligase RtcB DGN07_20760 PF08338 Domain of unknown function (DUF1731) DGN07_20760 PF01370 NAD dependent epimerase/dehydratase family DGN07_20765 PF00486 Transcriptional regulatory protein, C terminal DGN07_20765 PF00072 Response regulator receiver domain DGN07_20770 PF00512 His Kinase A (phospho-acceptor) domain DGN07_20770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_20770 PF08521 Two-component sensor kinase N-terminal DGN07_20795 PF00595 PDZ domain DGN07_20815 PF01594 AI-2E family transporter DGN07_20820 PF13419 Haloacid dehalogenase-like hydrolase DGN07_20825 PF00883 Cytosol aminopeptidase family, catalytic domain DGN07_20825 PF02789 Cytosol aminopeptidase family, N-terminal domain DGN07_20845 PF00872 Transposase, Mutator family DGN07_20865 PF00199 Catalase DGN07_20880 PF00196 Bacterial regulatory proteins, luxR family DGN07_20880 PF00072 Response regulator receiver domain DGN07_20885 PF07730 Histidine kinase DGN07_20890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGN07_20895 PF00005 ABC transporter DGN07_20915 PF00892 EamA-like transporter family DGN07_20920 PF00892 EamA-like transporter family DGN07_20940 PF00753 Metallo-beta-lactamase superfamily DGN07_20945 PF00579 tRNA synthetases class I (W and Y) DGN07_20950 PF05532 CsbD-like DGN07_20965 PF00491 Arginase family DGN07_20990 PF02223 Thymidylate kinase DGN07_21010 PF03309 Type III pantothenate kinase DGN07_21015 PF08279 HTH domain DGN07_21015 PF02237 Biotin protein ligase C terminal domain DGN07_21015 PF03099 Biotin/lipoate A/B protein ligase family DGN07_21030 PF06167 Glucose-regulated metallo-peptidase M90 DGN07_21045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_21050 PF00072 Response regulator receiver domain DGN07_21050 PF00486 Transcriptional regulatory protein, C terminal DGN07_21060 PF01207 Dihydrouridine synthase (Dus) DGN07_21080 PF06628 Catalase-related immune-responsive DGN07_21080 PF00199 Catalase DGN07_21090 PF13307 Helicase C-terminal domain DGN07_21090 PF06733 DEAD_2 DGN07_21105 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DGN07_21105 PF08501 Shikimate dehydrogenase substrate binding domain DGN07_21105 PF01488 Shikimate / quinate 5-dehydrogenase DGN07_21120 PF00667 FAD binding domain DGN07_21120 PF00258 Flavodoxin DGN07_21120 PF00175 Oxidoreductase NAD-binding domain DGN07_21130 PF03466 LysR substrate binding domain DGN07_21130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN07_21145 PF00490 Delta-aminolevulinic acid dehydratase DGN07_21170 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region DGN07_21170 PF00326 Prolyl oligopeptidase family DGN07_21175 PF02798 Glutathione S-transferase, N-terminal domain DGN07_21175 PF00043 Glutathione S-transferase, C-terminal domain DGN07_21195 PF04820 Tryptophan halogenase DGN07_21210 PF00005 ABC transporter DGN07_21220 PF01381 Helix-turn-helix DGN07_21230 PF01229 Glycosyl hydrolases family 39 DGN07_21235 PF02583 Metal-sensitive transcriptional repressor DGN07_21240 PF01545 Cation efflux family DGN07_21250 PF07715 TonB-dependent Receptor Plug Domain DGN07_21250 PF00593 TonB dependent receptor DGN07_21260 PF01965 DJ-1/PfpI family DGN07_21260 PF12833 Helix-turn-helix domain DGN07_21265 PF00175 Oxidoreductase NAD-binding domain DGN07_21265 PF01383 CpcD/allophycocyanin linker domain DGN07_21270 PF00005 ABC transporter DGN07_21275 PF01061 ABC-2 type transporter DGN07_21280 PF02558 Ketopantoate reductase PanE/ApbA DGN07_21280 PF08546 Ketopantoate reductase PanE/ApbA C terminal DGN07_21310 PF00268 Ribonucleotide reductase, small chain DGN07_21320 PF03477 ATP cone domain DGN07_21320 PF02867 Ribonucleotide reductase, barrel domain DGN07_21320 PF00317 Ribonucleotide reductase, all-alpha domain DGN07_21330 PF00583 Acetyltransferase (GNAT) family DGN07_21330 PF13607 Succinyl-CoA ligase like flavodoxin domain DGN07_21330 PF13380 CoA binding domain DGN07_21335 PF01769 Divalent cation transporter DGN07_21335 PF03448 MgtE intracellular N domain DGN07_21335 PF00571 CBS domain DGN07_21345 PF00194 Eukaryotic-type carbonic anhydrase DGN07_21355 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DGN07_21355 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DGN07_21360 PF00723 Glycosyl hydrolases family 15 DGN07_21375 PF05166 YcgL domain DGN07_21380 PF02801 Beta-ketoacyl synthase, C-terminal domain DGN07_21380 PF00109 Beta-ketoacyl synthase, N-terminal domain DGN07_21390 PF00535 Glycosyl transferase family 2 DGN07_21435 PF07977 FabA-like domain DGN07_21440 PF01553 Acyltransferase DGN07_21450 PF00550 Phosphopantetheine attachment site DGN07_21455 PF04820 Tryptophan halogenase DGN07_21480 PF00326 Prolyl oligopeptidase family DGN07_21480 PF07676 WD40-like Beta Propeller Repeat DGN07_21515 PF01218 Coproporphyrinogen III oxidase DGN07_21525 PF01367 5'-3' exonuclease, C-terminal SAM fold DGN07_21525 PF01612 3'-5' exonuclease DGN07_21525 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DGN07_21525 PF00476 DNA polymerase family A DGN07_21535 PF06812 ImpA, N-terminal, type VI secretion system DGN07_21555 PF00069 Protein kinase domain DGN07_21570 PF06761 Intracellular multiplication and human macrophage-killing DGN07_21570 PF14331 ImcF-related N-terminal domain DGN07_21570 PF06744 Type VI secretion protein IcmF C-terminal DGN07_21580 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE DGN07_21595 PF04717 Type VI secretion system, phage-baseplate injector DGN07_21610 PF00069 Protein kinase domain DGN07_21610 PF03793 PASTA domain DGN07_21620 PF04542 Sigma-70 region 2 DGN07_21620 PF08281 Sigma-70, region 4 DGN07_21640 PF00328 Histidine phosphatase superfamily (branch 2) DGN07_21675 PF00004 ATPase family associated with various cellular activities (AAA) DGN07_21675 PF07724 AAA domain (Cdc48 subfamily) DGN07_21675 PF17871 AAA lid domain DGN07_21675 PF10431 C-terminal, D2-small domain, of ClpB protein DGN07_21685 PF05947 Type VI secretion system, TssF DGN07_21690 PF04965 Gene 25-like lysozyme DGN07_21695 PF07024 ImpE protein DGN07_21700 PF05638 Type VI secretion system effector, Hcp DGN07_21705 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath DGN07_21710 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 DGN07_21725 PF14602 Hexapeptide repeat of succinyl-transferase DGN07_21725 PF12464 Maltose acetyltransferase DGN07_21735 PF00580 UvrD/REP helicase N-terminal domain DGN07_21735 PF13361 UvrD-like helicase C-terminal domain DGN07_21745 PF13091 PLD-like domain DGN07_21745 PF13396 Phospholipase_D-nuclease N-terminal DGN07_21750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN07_21750 PF03466 LysR substrate binding domain DGN07_21755 PF03737 Aldolase/RraA DGN07_21760 PF04303 PrpF protein DGN07_21775 PF00471 Ribosomal protein L33 DGN07_21780 PF00830 Ribosomal L28 family DGN07_21785 PF00873 AcrB/AcrD/AcrF family DGN07_21795 PF13533 Biotin-lipoyl like DGN07_21815 PF02527 rRNA small subunit methyltransferase G DGN07_21820 PF09423 PhoD-like phosphatase DGN07_21820 PF16655 PhoD-like phosphatase, N-terminal domain DGN07_21825 PF09423 PhoD-like phosphatase DGN07_21825 PF16655 PhoD-like phosphatase, N-terminal domain DGN07_21830 PF01648 4'-phosphopantetheinyl transferase superfamily DGN07_21835 PF04226 Transglycosylase associated protein DGN07_21845 PF03372 Endonuclease/Exonuclease/phosphatase family DGN07_21850 PF00480 ROK family DGN07_21860 PF00639 PPIC-type PPIASE domain DGN07_21860 PF09312 SurA N-terminal domain DGN07_21875 PF00474 Sodium:solute symporter family DGN07_21880 PF04341 Protein of unknown function, DUF485 DGN07_21890 PF16177 Acetyl-coenzyme A synthetase N-terminus DGN07_21890 PF13193 AMP-binding enzyme C-terminal domain DGN07_21890 PF00501 AMP-binding enzyme DGN07_21895 PF00196 Bacterial regulatory proteins, luxR family DGN07_21895 PF00072 Response regulator receiver domain DGN07_21930 PF00248 Aldo/keto reductase family DGN07_21945 PF01557 Fumarylacetoacetate (FAA) hydrolase family DGN07_21950 PF13378 Enolase C-terminal domain-like DGN07_21950 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DGN07_21955 PF05336 L-rhamnose mutarotase DGN07_21960 PF07690 Major Facilitator Superfamily DGN07_21965 PF01614 Bacterial transcriptional regulator DGN07_21965 PF09339 IclR helix-turn-helix domain DGN07_21970 PF02659 Putative manganese efflux pump DGN07_21975 PF00512 His Kinase A (phospho-acceptor) domain DGN07_21975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_21990 PF06165 Glycosyltransferase family 36 DGN07_21990 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain DGN07_22010 PF13360 PQQ-like domain DGN07_22010 PF13570 PQQ-like domain DGN07_22010 PF01011 PQQ enzyme repeat DGN07_22035 PF04357 TamB, inner membrane protein subunit of TAM complex DGN07_22040 PF17243 POTRA domain TamA domain 1 DGN07_22040 PF01103 Surface antigen DGN07_22050 PF05598 Transposase domain (DUF772) DGN07_22050 PF01609 Transposase DDE domain DGN07_22055 PF05598 Transposase domain (DUF772) DGN07_22055 PF01609 Transposase DDE domain DGN07_22070 PF01609 Transposase DDE domain DGN07_22070 PF05598 Transposase domain (DUF772) DGN07_22090 PF02092 Glycyl-tRNA synthetase beta subunit DGN07_22090 PF05746 DALR anticodon binding domain DGN07_22095 PF02091 Glycyl-tRNA synthetase alpha subunit DGN07_22100 PF00437 Type II/IV secretion system protein DGN07_22100 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DGN07_22120 PF00117 Glutamine amidotransferase class-I DGN07_22120 PF00958 GMP synthase C terminal domain DGN07_22130 PF00902 Sec-independent protein translocase protein (TatC) DGN07_22135 PF02416 mttA/Hcf106 family DGN07_22140 PF02416 mttA/Hcf106 family DGN07_22150 PF00762 Ferrochelatase DGN07_22155 PF12697 Alpha/beta hydrolase family DGN07_22170 PF04381 Putative exonuclease, RdgC DGN07_22175 PF01171 PP-loop family DGN07_22190 PF00356 Bacterial regulatory proteins, lacI family DGN07_22195 PF07488 Glycosyl hydrolase family 67 middle domain DGN07_22195 PF03648 Glycosyl hydrolase family 67 N-terminus DGN07_22195 PF07477 Glycosyl hydrolase family 67 C-terminus DGN07_22205 PF13378 Enolase C-terminal domain-like DGN07_22205 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DGN07_22210 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain DGN07_22210 PF04616 Glycosyl hydrolases family 43 DGN07_22215 PF01915 Glycosyl hydrolase family 3 C-terminal domain DGN07_22215 PF07691 PA14 domain DGN07_22215 PF00933 Glycosyl hydrolase family 3 N terminal domain DGN07_22215 PF14310 Fibronectin type III-like domain DGN07_22220 PF01232 Mannitol dehydrogenase Rossmann domain DGN07_22220 PF08125 Mannitol dehydrogenase C-terminal domain DGN07_22255 PF00171 Aldehyde dehydrogenase family DGN07_22280 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DGN07_22280 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DGN07_22300 PF08450 SMP-30/Gluconolactonase/LRE-like region DGN07_22305 PF00331 Glycosyl hydrolase family 10 DGN07_22310 PF02837 Glycosyl hydrolases family 2, sugar binding domain DGN07_22310 PF16355 Domain of unknown function (DUF4982) DGN07_22310 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 DGN07_22310 PF00703 Glycosyl hydrolases family 2 DGN07_22310 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DGN07_22315 PF02614 Glucuronate isomerase DGN07_22330 PF03422 Carbohydrate binding module (family 6) DGN07_22330 PF00331 Glycosyl hydrolase family 10 DGN07_22330 PF00553 Cellulose binding domain DGN07_22350 PF04616 Glycosyl hydrolases family 43 DGN07_22380 PF00550 Phosphopantetheine attachment site DGN07_22380 PF14765 Polyketide synthase dehydratase DGN07_22380 PF08659 KR domain DGN07_22380 PF02801 Beta-ketoacyl synthase, C-terminal domain DGN07_22380 PF00109 Beta-ketoacyl synthase, N-terminal domain DGN07_22380 PF16197 Ketoacyl-synthetase C-terminal extension DGN07_22380 PF00107 Zinc-binding dehydrogenase DGN07_22380 PF08240 Alcohol dehydrogenase GroES-like domain DGN07_22380 PF00698 Acyl transferase domain DGN07_22385 PF01553 Acyltransferase DGN07_22400 PF00356 Bacterial regulatory proteins, lacI family DGN07_22415 PF04820 Tryptophan halogenase DGN07_22420 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DGN07_22425 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) DGN07_22430 PF04337 Protein of unknown function, DUF480 DGN07_22450 PF13302 Acetyltransferase (GNAT) domain DGN07_22455 PF13361 UvrD-like helicase C-terminal domain DGN07_22455 PF00580 UvrD/REP helicase N-terminal domain DGN07_22460 PF00265 Thymidine kinase DGN07_22465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN07_22465 PF01590 GAF domain DGN07_22465 PF00360 Phytochrome region DGN07_22465 PF00512 His Kinase A (phospho-acceptor) domain DGN07_22465 PF08446 PAS fold DGN07_22470 PF04349 Periplasmic glucan biosynthesis protein, MdoG DGN07_22480 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DGN07_22480 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DGN07_22480 PF06827 Zinc finger found in FPG and IleRS DGN07_22510 PF03594 Benzoate membrane transport protein DGN07_22515 PF00360 Phytochrome region DGN07_22515 PF01590 GAF domain DGN07_22515 PF08446 PAS fold DGN07_22515 PF13426 PAS domain DGN07_22520 PF01126 Heme oxygenase DGN07_22525 PF07690 Major Facilitator Superfamily DGN07_22535 PF01263 Aldose 1-epimerase DGN07_22545 PF02810 SEC-C motif DGN07_22550 PF01925 Sulfite exporter TauE/SafE DGN07_22575 PF01227 GTP cyclohydrolase I DGN07_22585 PF07869 Protein of unknown function (DUF1656) DGN07_22590 PF00529 HlyD membrane-fusion protein of T1SS DGN07_22590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGN07_22595 PF02321 Outer membrane efflux protein DGN07_22600 PF04632 Fusaric acid resistance protein family DGN07_22605 PF00083 Sugar (and other) transporter DGN07_22615 PF03466 LysR substrate binding domain DGN07_22615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN07_22620 PF00106 short chain dehydrogenase DGN07_22630 PF13396 Phospholipase_D-nuclease N-terminal DGN07_22630 PF13091 PLD-like domain DGN07_22665 PF00872 Transposase, Mutator family DGN07_22690 PF00849 RNA pseudouridylate synthase DGN07_22720 PF01609 Transposase DDE domain DGN07_22720 PF05598 Transposase domain (DUF772) DGN07_22730 PF05598 Transposase domain (DUF772) DGN07_22730 PF01609 Transposase DDE domain DGN07_22815 PF13538 UvrD-like helicase C-terminal domain DGN07_22820 PF00580 UvrD/REP helicase N-terminal domain DGN07_22820 PF12705 PD-(D/E)XK nuclease superfamily DGN07_22820 PF13361 UvrD-like helicase C-terminal domain DGN07_22825 PF17946 RecC C-terminal domain DGN07_22860 PF00005 ABC transporter DGN07_22865 PF02405 Permease MlaE DGN07_22870 PF02470 MlaD protein DGN07_22875 PF05494 MlaC protein DGN07_22885 PF04333 MlaA lipoprotein DGN07_22895 PF00255 Glutathione peroxidase DGN07_22905 PF02646 RmuC family DGN07_22925 PF00043 Glutathione S-transferase, C-terminal domain DGN07_22925 PF13417 Glutathione S-transferase, N-terminal domain DGN07_22965 PF00239 Resolvase, N terminal domain DGN07_22965 PF02796 Helix-turn-helix domain of resolvase DGN07_22970 PF04221 RelB antitoxin DGN07_22975 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ DGN07_23030 PF18272 single-stranded DNA binding TraI N-terminal subdomain DGN07_23030 PF07057 DNA helicase TraI DGN07_23030 PF08751 TrwC relaxase DGN07_23030 PF18340 DNA relaxase TraI 2B/2B-like domain DGN07_23035 PF02203 Tar ligand binding domain homologue DGN07_23035 PF00672 HAMP domain DGN07_23035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN07_23065 PF02796 Helix-turn-helix domain of resolvase DGN07_23065 PF00239 Resolvase, N terminal domain DGN07_23095 PF00872 Transposase, Mutator family DGN07_23115 PF06616 BsuBI/PstI restriction endonuclease domain DGN07_23115 PF17728 BsuBI/PstI restriction endonuclease HTH domain DGN07_23120 PF13614 AAA domain DGN07_23140 PF17678 Glycosyl hydrolase family 92 N-terminal domain DGN07_23140 PF07971 Glycosyl hydrolase family 92 DGN07_23150 PF10947 Protein of unknown function (DUF2628) DGN07_23165 PF02595 Glycerate kinase family DGN07_23170 PF07690 Major Facilitator Superfamily DGN07_23185 PF17785 PUA-like domain DGN07_23185 PF10672 S-adenosylmethionine-dependent methyltransferase DGN07_23195 PF03741 Integral membrane protein TerC family DGN07_23200 PF01694 Rhomboid family DGN07_23205 PF03009 Glycerophosphoryl diester phosphodiesterase family DGN07_23215 PF01609 Transposase DDE domain DGN07_23215 PF05598 Transposase domain (DUF772) DGN07_23220 PF01569 PAP2 superfamily DGN07_23225 PF10396 GTP-binding protein TrmE N-terminus DGN07_23225 PF12631 MnmE helical domain DGN07_23225 PF01926 50S ribosome-binding GTPase DGN07_23235 PF02096 60Kd inner membrane protein DGN07_23235 PF14849 YidC periplasmic domain DGN07_23240 PF00825 Ribonuclease P DGN07_23245 PF00468 Ribosomal protein L34 DGN07_23280 PF06067 Domain of unknown function (DUF932) DGN07_23305 PF18495 Antitoxin VbhA DGN07_23315 PF17841 BID domain of Bartonella effector protein (Bep) DGN07_23315 PF02661 Fic/DOC family DGN07_23325 PF00872 Transposase, Mutator family DGN07_23330 PF00872 Transposase, Mutator family DGN07_23380 PF00872 Transposase, Mutator family DGN07_23385 PF02796 Helix-turn-helix domain of resolvase DGN07_23385 PF00239 Resolvase, N terminal domain DGN07_23395 PF01555 DNA methylase DGN07_23400 PF09571 XcyI restriction endonuclease DGN07_23460 PF13406 Transglycosylase SLT domain DGN07_23490 PF11740 Plasmid replication region DNA-binding N-term DGN07_23530 PF03377 TAL effector repeat DGN07_23610 PF03421 YopJ Serine/Threonine acetyltransferase DGN07_23635 PF00239 Resolvase, N terminal domain DGN07_23635 PF02796 Helix-turn-helix domain of resolvase DGN07_23645 PF01850 PIN domain DGN07_23700 PF03743 Bacterial conjugation TrbI-like protein DGN07_23755 PF02534 Type IV secretory system Conjugative DNA transfer DGN07_23825 PF03377 TAL effector repeat