locus-tag class description AC613_00005 PF00308 Bacterial dnaA protein AC613_00005 PF11638 DnaA N-terminal domain AC613_00005 PF08299 Bacterial dnaA protein helix-turn-helix AC613_00010 PF02767 DNA polymerase III beta subunit, central domain AC613_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain AC613_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain AC613_00015 PF02463 RecF/RecN/SMC N terminal domain AC613_00020 PF18053 DNA gyrase B subunit insert domain AC613_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_00020 PF01751 Toprim domain AC613_00020 PF00986 DNA gyrase B subunit, carboxyl terminus AC613_00020 PF00204 DNA gyrase B AC613_00030 PF01435 Peptidase family M48 AC613_00040 PF03544 Gram-negative bacterial TonB protein C-terminal AC613_00045 PF01618 MotA/TolQ/ExbB proton channel family AC613_00050 PF02472 Biopolymer transport protein ExbD/TolR AC613_00055 PF02472 Biopolymer transport protein ExbD/TolR AC613_00065 PF02472 Biopolymer transport protein ExbD/TolR AC613_00070 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AC613_00080 PF13091 PLD-like domain AC613_00080 PF13396 Phospholipase_D-nuclease N-terminal AC613_00095 PF04055 Radical SAM superfamily AC613_00105 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AC613_00120 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AC613_00120 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AC613_00125 PF03572 Peptidase family S41 AC613_00125 PF13180 PDZ domain AC613_00130 PF01551 Peptidase family M23 AC613_00140 PF04389 Peptidase family M28 AC613_00150 PF00150 Cellulase (glycosyl hydrolase family 5) AC613_00155 PF00150 Cellulase (glycosyl hydrolase family 5) AC613_00160 PF00150 Cellulase (glycosyl hydrolase family 5) AC613_00165 PF08240 Alcohol dehydrogenase GroES-like domain AC613_00165 PF00107 Zinc-binding dehydrogenase AC613_00170 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AC613_00170 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC613_00175 PF04898 Glutamate synthase central domain AC613_00175 PF00310 Glutamine amidotransferases class-II AC613_00175 PF01493 GXGXG motif AC613_00175 PF01645 Conserved region in glutamate synthase AC613_00255 PF00271 Helicase conserved C-terminal domain AC613_00255 PF09369 Domain of unknown function (DUF1998) AC613_00255 PF00270 DEAD/DEAH box helicase AC613_00260 PF03006 Haemolysin-III related AC613_00275 PF00106 short chain dehydrogenase AC613_00285 PF03466 LysR substrate binding domain AC613_00285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC613_00300 PF02525 Flavodoxin-like fold AC613_00305 PF01527 Transposase AC613_00315 PF01609 Transposase DDE domain AC613_00315 PF05598 Transposase domain (DUF772) AC613_00320 PF05598 Transposase domain (DUF772) AC613_00320 PF01609 Transposase DDE domain AC613_00350 PF12867 DinB superfamily AC613_00350 PF03781 Sulfatase-modifying factor enzyme 1 AC613_00360 PF00528 Binding-protein-dependent transport system inner membrane component AC613_00365 PF00571 CBS domain AC613_00365 PF00005 ABC transporter AC613_00380 PF00005 ABC transporter AC613_00390 PF01734 Patatin-like phospholipase AC613_00395 PF07660 Secretin and TonB N terminus short domain AC613_00395 PF07715 TonB-dependent Receptor Plug Domain AC613_00395 PF00593 TonB dependent receptor AC613_00400 PF01037 Lrp/AsnC ligand binding domain AC613_00405 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AC613_00415 PF00657 GDSL-like Lipase/Acylhydrolase AC613_00430 PF04962 KduI/IolB family AC613_00435 PF00356 Bacterial regulatory proteins, lacI family AC613_00440 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AC613_00440 PF04616 Glycosyl hydrolases family 43 AC613_00445 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AC613_00455 PF03480 Bacterial extracellular solute-binding protein, family 7 AC613_00465 PF13472 GDSL-like Lipase/Acylhydrolase family AC613_00465 PF07859 alpha/beta hydrolase fold AC613_00470 PF00135 Carboxylesterase family AC613_00475 PF00248 Aldo/keto reductase family AC613_00485 PF02806 Alpha amylase, C-terminal all-beta domain AC613_00485 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AC613_00485 PF00128 Alpha amylase, catalytic domain AC613_00490 PF16657 Maltogenic Amylase, C-terminal domain AC613_00490 PF00128 Alpha amylase, catalytic domain AC613_00495 PF00128 Alpha amylase, catalytic domain AC613_00495 PF11896 Domain of unknown function (DUF3416) AC613_00510 PF05598 Transposase domain (DUF772) AC613_00510 PF01609 Transposase DDE domain AC613_00535 PF00872 Transposase, Mutator family AC613_00540 PF01609 Transposase DDE domain AC613_00540 PF05598 Transposase domain (DUF772) AC613_00550 PF00872 Transposase, Mutator family AC613_00565 PF00294 pfkB family carbohydrate kinase AC613_00575 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AC613_00575 PF12241 Trans-2-enoyl-CoA reductase catalytic region AC613_00575 PF07055 Enoyl reductase FAD binding domain AC613_00580 PF18500 CadC C-terminal domain 1 AC613_00580 PF00486 Transcriptional regulatory protein, C terminal AC613_00600 PF00072 Response regulator receiver domain AC613_00600 PF00196 Bacterial regulatory proteins, luxR family AC613_00605 PF07730 Histidine kinase AC613_00610 PF00144 Beta-lactamase AC613_00615 PF01070 FMN-dependent dehydrogenase AC613_00620 PF02735 Ku70/Ku80 beta-barrel domain AC613_00640 PF00171 Aldehyde dehydrogenase family AC613_00650 PF01609 Transposase DDE domain AC613_00650 PF05598 Transposase domain (DUF772) AC613_00660 PF07715 TonB-dependent Receptor Plug Domain AC613_00660 PF00593 TonB dependent receptor AC613_00665 PF00155 Aminotransferase class I and II AC613_00670 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AC613_00700 PF17863 AAA lid domain AC613_00700 PF07726 ATPase family associated with various cellular activities (AAA) AC613_00740 PF00083 Sugar (and other) transporter AC613_00740 PF08946 Osmosensory transporter coiled coil AC613_00745 PF00085 Thioredoxin AC613_00760 PF13344 Haloacid dehalogenase-like hydrolase AC613_00760 PF00293 NUDIX domain AC613_00765 PF05598 Transposase domain (DUF772) AC613_00765 PF01609 Transposase DDE domain AC613_00800 PF05532 CsbD-like AC613_00810 PF05598 Transposase domain (DUF772) AC613_00810 PF01609 Transposase DDE domain AC613_00825 PF10609 NUBPL iron-transfer P-loop NTPase AC613_00825 PF01883 Iron-sulfur cluster assembly protein AC613_00840 PF13091 PLD-like domain AC613_00845 PF03061 Thioesterase superfamily AC613_00875 PF08240 Alcohol dehydrogenase GroES-like domain AC613_00875 PF00107 Zinc-binding dehydrogenase AC613_00885 PF02673 Bacitracin resistance protein BacA AC613_00890 PF00120 Glutamine synthetase, catalytic domain AC613_00890 PF03951 Glutamine synthetase, beta-Grasp domain AC613_00895 PF00543 Nitrogen regulatory protein P-II AC613_00900 PF00909 Ammonium Transporter Family AC613_00905 PF00512 His Kinase A (phospho-acceptor) domain AC613_00905 PF00989 PAS fold AC613_00905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_00910 PF00072 Response regulator receiver domain AC613_00910 PF00158 Sigma-54 interaction domain AC613_00910 PF02954 Bacterial regulatory protein, Fis family AC613_00915 PF00080 Copper/zinc superoxide dismutase (SODC) AC613_00920 PF00080 Copper/zinc superoxide dismutase (SODC) AC613_00930 PF05598 Transposase domain (DUF772) AC613_00930 PF01609 Transposase DDE domain AC613_00940 PF02803 Thiolase, C-terminal domain AC613_00940 PF00108 Thiolase, N-terminal domain AC613_00975 PF00581 Rhodanese-like domain AC613_00980 PF02556 Preprotein translocase subunit SecB AC613_00985 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AC613_00985 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AC613_00995 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AC613_00995 PF00205 Thiamine pyrophosphate enzyme, central domain AC613_00995 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AC613_01000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_01005 PF00072 Response regulator receiver domain AC613_01005 PF00158 Sigma-54 interaction domain AC613_01005 PF02954 Bacterial regulatory protein, Fis family AC613_01020 PF07690 Major Facilitator Superfamily AC613_01025 PF00588 SpoU rRNA Methylase family AC613_01040 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AC613_01040 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AC613_01050 PF00561 alpha/beta hydrolase fold AC613_01055 PF03692 Putative zinc- or iron-chelating domain AC613_01060 PF00501 AMP-binding enzyme AC613_01065 PF00072 Response regulator receiver domain AC613_01065 PF00486 Transcriptional regulatory protein, C terminal AC613_01070 PF00144 Beta-lactamase AC613_01075 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family AC613_01100 PF03109 ABC1 family AC613_01110 PF00849 RNA pseudouridylate synthase AC613_01120 PF00472 RF-1 domain AC613_01130 PF01112 Asparaginase AC613_01135 PF01432 Peptidase family M3 AC613_01140 PF12706 Beta-lactamase superfamily domain AC613_01160 PF12833 Helix-turn-helix domain AC613_01165 PF00999 Sodium/hydrogen exchanger family AC613_01170 PF03466 LysR substrate binding domain AC613_01170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC613_01175 PF01274 Malate synthase AC613_01180 PF00463 Isocitrate lyase family AC613_01185 PF00990 Diguanylate cyclase, GGDEF domain AC613_01200 PF01609 Transposase DDE domain AC613_01200 PF05598 Transposase domain (DUF772) AC613_01225 PF00326 Prolyl oligopeptidase family AC613_01230 PF02785 Biotin carboxylase C-terminal domain AC613_01230 PF00364 Biotin-requiring enzyme AC613_01230 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AC613_01230 PF00289 Biotin carboxylase, N-terminal domain AC613_01235 PF01039 Carboxyl transferase domain AC613_01240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC613_01240 PF02770 Acyl-CoA dehydrogenase, middle domain AC613_01240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC613_01295 PF02492 CobW/HypB/UreG, nucleotide-binding domain AC613_01295 PF07683 Cobalamin synthesis protein cobW C-terminal domain AC613_01320 PF03969 AFG1-like ATPase AC613_01325 PF01047 MarR family AC613_01330 PF02566 OsmC-like protein AC613_01360 PF00107 Zinc-binding dehydrogenase AC613_01360 PF16884 N-terminal domain of oxidoreductase AC613_01375 PF00849 RNA pseudouridylate synthase AC613_01380 PF00593 TonB dependent receptor AC613_01390 PF00270 DEAD/DEAH box helicase AC613_01390 PF08482 ATP-dependent helicase C-terminal AC613_01390 PF00271 Helicase conserved C-terminal domain AC613_01390 PF04408 Helicase associated domain (HA2) AC613_01395 PF07308 Protein of unknown function (DUF1456) AC613_01400 PF00576 HIUase/Transthyretin family AC613_01405 PF13454 FAD-NAD(P)-binding AC613_01410 PF01014 Uricase AC613_01410 PF09349 OHCU decarboxylase AC613_01425 PF00266 Aminotransferase class-V AC613_01430 PF07687 Peptidase dimerisation domain AC613_01430 PF01546 Peptidase family M20/M25/M40 AC613_01435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC613_01435 PF03466 LysR substrate binding domain AC613_01440 PF00561 alpha/beta hydrolase fold AC613_01455 PF01425 Amidase AC613_01460 PF01156 Inosine-uridine preferring nucleoside hydrolase AC613_01470 PF00860 Permease family AC613_01480 PF00111 2Fe-2S iron-sulfur cluster binding domain AC613_01485 PF00355 Rieske [2Fe-2S] domain AC613_01490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC613_01490 PF03466 LysR substrate binding domain AC613_01510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC613_01510 PF03466 LysR substrate binding domain AC613_01515 PF07690 Major Facilitator Superfamily AC613_01525 PF08386 TAP-like protein AC613_01525 PF00561 alpha/beta hydrolase fold AC613_01530 PF02146 Sir2 family AC613_01535 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AC613_01540 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AC613_01540 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AC613_01550 PF00551 Formyl transferase AC613_01555 PF00486 Transcriptional regulatory protein, C terminal AC613_01555 PF00072 Response regulator receiver domain AC613_01560 PF00672 HAMP domain AC613_01560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_01560 PF00512 His Kinase A (phospho-acceptor) domain AC613_01565 PF00529 HlyD membrane-fusion protein of T1SS AC613_01565 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC613_01570 PF00873 AcrB/AcrD/AcrF family AC613_01575 PF08139 Prokaryotic membrane lipoprotein lipid attachment site AC613_01575 PF02321 Outer membrane efflux protein AC613_01585 PF02219 Methylenetetrahydrofolate reductase AC613_01590 PF02677 Epoxyqueuosine reductase QueH AC613_01595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC613_01595 PF03466 LysR substrate binding domain AC613_01600 PF03358 NADPH-dependent FMN reductase AC613_01610 PF08267 Cobalamin-independent synthase, N-terminal domain AC613_01610 PF01717 Cobalamin-independent synthase, Catalytic domain AC613_01615 PF03812 2-keto-3-deoxygluconate permease AC613_01630 PF05368 NmrA-like family AC613_01635 PF01638 HxlR-like helix-turn-helix AC613_01655 PF01609 Transposase DDE domain AC613_01655 PF05598 Transposase domain (DUF772) AC613_01680 PF00872 Transposase, Mutator family AC613_01705 PF01609 Transposase DDE domain AC613_01705 PF05598 Transposase domain (DUF772) AC613_01715 PF00920 Dehydratase family AC613_01735 PF00132 Bacterial transferase hexapeptide (six repeats) AC613_01745 PF07690 Major Facilitator Superfamily AC613_01750 PF01966 HD domain AC613_01750 PF11871 Domain of unknown function (DUF3391) AC613_01780 PF01494 FAD binding domain AC613_01790 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AC613_01790 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AC613_01795 PF00230 Major intrinsic protein AC613_01800 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AC613_01800 PF01266 FAD dependent oxidoreductase AC613_01805 PF08220 DeoR-like helix-turn-helix domain AC613_01805 PF00455 DeoR C terminal sensor domain AC613_01815 PF00355 Rieske [2Fe-2S] domain AC613_01820 PF01144 Coenzyme A transferase AC613_01825 PF01144 Coenzyme A transferase AC613_01830 PF02803 Thiolase, C-terminal domain AC613_01830 PF00108 Thiolase, N-terminal domain AC613_01835 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AC613_01835 PF00775 Dioxygenase AC613_01845 PF10397 Adenylosuccinate lyase C-terminus AC613_01845 PF00206 Lyase AC613_01850 PF12146 Serine aminopeptidase, S33 AC613_01855 PF02627 Carboxymuconolactone decarboxylase family AC613_01865 PF09339 IclR helix-turn-helix domain AC613_01865 PF01614 Bacterial transcriptional regulator AC613_01875 PF07859 alpha/beta hydrolase fold AC613_01880 PF10677 Protein of unknown function (DUF2490) AC613_01885 PF01134 Glucose inhibited division protein A AC613_01885 PF13932 GidA associated domain AC613_01895 PF00291 Pyridoxal-phosphate dependent enzyme AC613_01915 PF13649 Methyltransferase domain AC613_01930 PF12697 Alpha/beta hydrolase family AC613_01940 PF00155 Aminotransferase class I and II AC613_01945 PF06968 Biotin and Thiamin Synthesis associated domain AC613_01945 PF04055 Radical SAM superfamily AC613_01955 PF01040 UbiA prenyltransferase family AC613_01975 PF05819 NolX protein AC613_01980 PF01609 Transposase DDE domain AC613_01980 PF05598 Transposase domain (DUF772) AC613_02020 PF01313 Bacterial export proteins, family 3 AC613_02025 PF00813 FliP family AC613_02040 PF00771 FHIPEP family AC613_02045 PF01312 FlhB HrpN YscU SpaS Family AC613_02060 PF01514 Secretory protein of YscJ/FliF family AC613_02075 PF18269 T3SS EscN ATPase C-terminal domain AC613_02075 PF02874 ATP synthase alpha/beta family, beta-barrel domain AC613_02075 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AC613_02085 PF01311 Bacterial export proteins, family 1 AC613_02100 PF01464 Transglycosylase SLT domain AC613_02115 PF00924 Mechanosensitive ion channel AC613_02115 PF12794 Mechanosensitive ion channel inner membrane domain 1 AC613_02115 PF12795 Mechanosensitive ion channel porin domain AC613_02120 PF00884 Sulfatase AC613_02125 PF03109 ABC1 family AC613_02135 PF05661 Protein of unknown function (DUF808) AC613_02140 PF00072 Response regulator receiver domain AC613_02140 PF00990 Diguanylate cyclase, GGDEF domain AC613_02145 PF08323 Starch synthase catalytic domain AC613_02145 PF00534 Glycosyl transferases group 1 AC613_02150 PF02806 Alpha amylase, C-terminal all-beta domain AC613_02150 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AC613_02150 PF00128 Alpha amylase, catalytic domain AC613_02155 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AC613_02155 PF11941 Domain of unknown function (DUF3459) AC613_02155 PF00128 Alpha amylase, catalytic domain AC613_02160 PF02446 4-alpha-glucanotransferase AC613_02165 PF00128 Alpha amylase, catalytic domain AC613_02175 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AC613_02175 PF00128 Alpha amylase, catalytic domain AC613_02180 PF13460 NAD(P)H-binding AC613_02200 PF06903 VirK protein AC613_02205 PF02321 Outer membrane efflux protein AC613_02220 PF00873 AcrB/AcrD/AcrF family AC613_02235 PF00270 DEAD/DEAH box helicase AC613_02235 PF00271 Helicase conserved C-terminal domain AC613_02240 PF02817 e3 binding domain AC613_02240 PF00364 Biotin-requiring enzyme AC613_02240 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AC613_02250 PF02780 Transketolase, C-terminal domain AC613_02250 PF02779 Transketolase, pyrimidine binding domain AC613_02255 PF00676 Dehydrogenase E1 component AC613_02265 PF03301 Tryptophan 2,3-dioxygenase AC613_02270 PF00854 POT family AC613_02280 PF01047 MarR family AC613_02285 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AC613_02305 PF03334 Na+/H+ antiporter subunit AC613_02310 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AC613_02320 PF00361 Proton-conducting membrane transporter AC613_02325 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AC613_02330 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AC613_02330 PF00361 Proton-conducting membrane transporter AC613_02330 PF13244 Domain of unknown function (DUF4040) AC613_02330 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AC613_02345 PF01447 Thermolysin metallopeptidase, catalytic domain AC613_02345 PF01483 Proprotein convertase P-domain AC613_02345 PF07504 Fungalysin/Thermolysin Propeptide Motif AC613_02345 PF02868 Thermolysin metallopeptidase, alpha-helical domain AC613_02355 PF01259 SAICAR synthetase AC613_02360 PF00226 DnaJ domain AC613_02360 PF05099 Tellurite resistance protein TerB AC613_02370 PF00834 Ribulose-phosphate 3 epimerase family AC613_02375 PF00583 Acetyltransferase (GNAT) family AC613_02380 PF00781 Diacylglycerol kinase catalytic domain AC613_02385 PF00425 chorismate binding enzyme AC613_02385 PF04715 Anthranilate synthase component I, N terminal region AC613_02400 PF05598 Transposase domain (DUF772) AC613_02400 PF01609 Transposase DDE domain AC613_02405 PF01609 Transposase DDE domain AC613_02405 PF05598 Transposase domain (DUF772) AC613_02410 PF05598 Transposase domain (DUF772) AC613_02410 PF01609 Transposase DDE domain AC613_02420 PF01609 Transposase DDE domain AC613_02420 PF05598 Transposase domain (DUF772) AC613_02430 PF00117 Glutamine amidotransferase class-I AC613_02440 PF00591 Glycosyl transferase family, a/b domain AC613_02440 PF02885 Glycosyl transferase family, helical bundle domain AC613_02445 PF00218 Indole-3-glycerol phosphate synthase AC613_02455 PF00325 Bacterial regulatory proteins, crp family AC613_02455 PF00027 Cyclic nucleotide-binding domain AC613_02460 PF02675 S-adenosylmethionine decarboxylase AC613_02465 PF00893 Small Multidrug Resistance protein AC613_02470 PF03232 Ubiquinone biosynthesis protein COQ7 AC613_02475 PF00572 Ribosomal protein L13 AC613_02480 PF00380 Ribosomal protein S9/S16 AC613_02495 PF00293 NUDIX domain AC613_02505 PF00210 Ferritin-like domain AC613_02510 PF00072 Response regulator receiver domain AC613_02510 PF01627 Hpt domain AC613_02510 PF00512 His Kinase A (phospho-acceptor) domain AC613_02510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_02510 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AC613_02510 PF00672 HAMP domain AC613_02515 PF00486 Transcriptional regulatory protein, C terminal AC613_02515 PF00072 Response regulator receiver domain AC613_02535 PF01521 Iron-sulphur cluster biosynthesis AC613_02545 PF09297 NADH pyrophosphatase zinc ribbon domain AC613_02545 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AC613_02545 PF00293 NUDIX domain AC613_02550 PF03186 CobD/Cbib protein AC613_02550 PF17113 Regulatory signalling modulator protein AmpE AC613_02565 PF07690 Major Facilitator Superfamily AC613_02575 PF07690 Major Facilitator Superfamily AC613_02580 PF12805 FUSC-like inner membrane protein yccS AC613_02590 PF02844 Phosphoribosylglycinamide synthetase, N domain AC613_02590 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AC613_02590 PF02843 Phosphoribosylglycinamide synthetase, C domain AC613_02600 PF01808 AICARFT/IMPCHase bienzyme AC613_02600 PF02142 MGS-like domain AC613_02605 PF01066 CDP-alcohol phosphatidyltransferase AC613_02615 PF00782 Dual specificity phosphatase, catalytic domain AC613_02645 PF02954 Bacterial regulatory protein, Fis family AC613_02660 PF01381 Helix-turn-helix AC613_02685 PF02785 Biotin carboxylase C-terminal domain AC613_02685 PF00289 Biotin carboxylase, N-terminal domain AC613_02685 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AC613_02695 PF00364 Biotin-requiring enzyme AC613_02700 PF01220 Dehydroquinase class II AC613_02705 PF11412 Disulphide bond corrector protein DsbC AC613_02705 PF02683 Cytochrome C biogenesis protein transmembrane region AC613_02710 PF03091 CutA1 divalent ion tolerance protein AC613_02715 PF04231 Endonuclease I AC613_02720 PF00166 Chaperonin 10 Kd subunit AC613_02725 PF00118 TCP-1/cpn60 chaperonin family AC613_02735 PF07715 TonB-dependent Receptor Plug Domain AC613_02735 PF00593 TonB dependent receptor AC613_02740 PF00793 DAHP synthetase I family AC613_02755 PF08450 SMP-30/Gluconolactonase/LRE-like region AC613_02765 PF03710 Glutamate-ammonia ligase adenylyltransferase AC613_02765 PF08335 GlnD PII-uridylyltransferase AC613_02770 PF02592 Putative vitamin uptake transporter AC613_02800 PF00881 Nitroreductase family AC613_02805 PF04264 YceI-like domain AC613_02830 PF16957 Malonate decarboxylase, alpha subunit, transporter AC613_02835 PF06857 Malonate decarboxylase delta subunit (MdcD) AC613_02840 PF01039 Carboxyl transferase domain AC613_02850 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG AC613_02855 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AC613_02860 PF00698 Acyl transferase domain AC613_02870 PF00392 Bacterial regulatory proteins, gntR family AC613_02870 PF07729 FCD domain AC613_02905 PF07745 Glycosyl hydrolase family 53 AC613_02910 PF17831 Pyruvate dehydrogenase E1 component middle domain AC613_02910 PF00456 Transketolase, thiamine diphosphate binding domain AC613_02920 PF00872 Transposase, Mutator family AC613_02935 PF01609 Transposase DDE domain AC613_02935 PF05598 Transposase domain (DUF772) AC613_02945 PF00106 short chain dehydrogenase AC613_02960 PF00106 short chain dehydrogenase AC613_02970 PF13409 Glutathione S-transferase, N-terminal domain AC613_03005 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AC613_03005 PF00326 Prolyl oligopeptidase family AC613_03010 PF07759 Protein of unknown function (DUF1615) AC613_03015 PF05230 MASE2 domain AC613_03015 PF00990 Diguanylate cyclase, GGDEF domain AC613_03035 PF00892 EamA-like transporter family AC613_03040 PF03330 Lytic transglycolase AC613_03050 PF01341 Glycosyl hydrolases family 6 AC613_03050 PF00041 Fibronectin type III domain AC613_03050 PF00553 Cellulose binding domain AC613_03065 PF00324 Amino acid permease AC613_03075 PF01544 CorA-like Mg2+ transporter protein AC613_03085 PF01204 Trehalase AC613_03095 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AC613_03095 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AC613_03115 PF00563 EAL domain AC613_03115 PF00990 Diguanylate cyclase, GGDEF domain AC613_03115 PF03707 Bacterial signalling protein N terminal repeat AC613_03120 PF02203 Tar ligand binding domain homologue AC613_03120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC613_03120 PF00672 HAMP domain AC613_03125 PF00553 Cellulose binding domain AC613_03125 PF00150 Cellulase (glycosyl hydrolase family 5) AC613_03130 PF01740 STAS domain AC613_03130 PF00916 Sulfate permease family AC613_03145 PF13632 Glycosyl transferase family group 2 AC613_03155 PF06580 Histidine kinase AC613_03155 PF07694 5TMR of 5TMR-LYT AC613_03160 PF00072 Response regulator receiver domain AC613_03160 PF04397 LytTr DNA-binding domain AC613_03165 PF03900 Porphobilinogen deaminase, C-terminal domain AC613_03165 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AC613_03190 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AC613_03190 PF00326 Prolyl oligopeptidase family AC613_03195 PF00155 Aminotransferase class I and II AC613_03200 PF00326 Prolyl oligopeptidase family AC613_03200 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AC613_03205 PF04304 Protein of unknown function (DUF454) AC613_03215 PF01678 Diaminopimelate epimerase AC613_03225 PF00589 Phage integrase family AC613_03225 PF02899 Phage integrase, N-terminal SAM-like domain AC613_03230 PF00227 Proteasome subunit AC613_03235 PF10431 C-terminal, D2-small domain, of ClpB protein AC613_03235 PF00004 ATPase family associated with various cellular activities (AAA) AC613_03235 PF07724 AAA domain (Cdc48 subfamily) AC613_03245 PF13673 Acetyltransferase (GNAT) domain AC613_03250 PF13533 Biotin-lipoyl like AC613_03260 PF01209 ubiE/COQ5 methyltransferase family AC613_03265 PF03707 Bacterial signalling protein N terminal repeat AC613_03265 PF00990 Diguanylate cyclase, GGDEF domain AC613_03265 PF00563 EAL domain AC613_03270 PF01433 Peptidase family M1 domain AC613_03270 PF11838 ERAP1-like C-terminal domain AC613_03290 PF00497 Bacterial extracellular solute-binding proteins, family 3 AC613_03305 PF08240 Alcohol dehydrogenase GroES-like domain AC613_03305 PF00107 Zinc-binding dehydrogenase AC613_03320 PF00294 pfkB family carbohydrate kinase AC613_03330 PF04085 rod shape-determining protein MreC AC613_03340 PF03717 Penicillin-binding Protein dimerisation domain AC613_03340 PF00905 Penicillin binding protein transpeptidase domain AC613_03345 PF01098 Cell cycle protein AC613_03350 PF00295 Glycosyl hydrolases family 28 AC613_03355 PF13406 Transglycosylase SLT domain AC613_03360 PF05036 Sporulation related domain AC613_03360 PF03330 Lytic transglycolase AC613_03365 PF07943 Penicillin-binding protein 5, C-terminal domain AC613_03365 PF00768 D-alanyl-D-alanine carboxypeptidase AC613_03375 PF04359 Protein of unknown function (DUF493) AC613_03380 PF03099 Biotin/lipoate A/B protein ligase family AC613_03385 PF04055 Radical SAM superfamily AC613_03385 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AC613_03390 PF17804 Tail specific protease N-terminal domain AC613_03390 PF11818 C-terminal domain of tail specific protease (DUF3340) AC613_03390 PF00595 PDZ domain AC613_03390 PF03572 Peptidase family S41 AC613_03400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC613_03400 PF03466 LysR substrate binding domain AC613_03410 PF00293 NUDIX domain AC613_03410 PF01467 Cytidylyltransferase-like AC613_03445 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AC613_03445 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AC613_03450 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AC613_03450 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AC613_03455 PF04972 BON domain AC613_03460 PF00360 Phytochrome region AC613_03460 PF08446 PAS fold AC613_03460 PF00512 His Kinase A (phospho-acceptor) domain AC613_03460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_03460 PF01590 GAF domain AC613_03465 PF00072 Response regulator receiver domain AC613_03470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_03470 PF00512 His Kinase A (phospho-acceptor) domain AC613_03475 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AC613_03520 PF00263 Bacterial type II and III secretion system protein AC613_03520 PF03958 Bacterial type II/III secretion system short domain AC613_03525 PF00437 Type II/IV secretion system protein AC613_03530 PF00482 Type II secretion system (T2SS), protein F AC613_03535 PF08334 Type II secretion system (T2SS), protein G AC613_03535 PF07963 Prokaryotic N-terminal methylation motif AC613_03540 PF12019 Type II transport protein GspH AC613_03540 PF07963 Prokaryotic N-terminal methylation motif AC613_03545 PF07963 Prokaryotic N-terminal methylation motif AC613_03545 PF02501 Type II secretion system (T2SS), protein I AC613_03550 PF07963 Prokaryotic N-terminal methylation motif AC613_03550 PF11612 Type II secretion system (T2SS), protein J AC613_03555 PF03934 Type II secretion system (T2SS), protein K AC613_03580 PF16355 Domain of unknown function (DUF4982) AC613_03580 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 AC613_03580 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AC613_03580 PF02837 Glycosyl hydrolases family 2, sugar binding domain AC613_03580 PF00703 Glycosyl hydrolases family 2 AC613_03600 PF07690 Major Facilitator Superfamily AC613_03605 PF00356 Bacterial regulatory proteins, lacI family AC613_03610 PF01380 SIS domain AC613_03615 PF01979 Amidohydrolase family AC613_03630 PF12627 Probable RNA and SrmB- binding site of polymerase A AC613_03630 PF01743 Poly A polymerase head domain AC613_03630 PF01966 HD domain AC613_03635 PF00732 GMC oxidoreductase AC613_03635 PF05199 GMC oxidoreductase AC613_03640 PF00171 Aldehyde dehydrogenase family AC613_03645 PF02028 BCCT, betaine/carnitine/choline family transporter AC613_03655 PF01323 DSBA-like thioredoxin domain AC613_03665 PF00034 Cytochrome c AC613_03670 PF01926 50S ribosome-binding GTPase AC613_03685 PF04107 Glutamate-cysteine ligase family 2(GCS2) AC613_03695 PF00512 His Kinase A (phospho-acceptor) domain AC613_03695 PF00672 HAMP domain AC613_03695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_03700 PF00072 Response regulator receiver domain AC613_03700 PF00486 Transcriptional regulatory protein, C terminal AC613_03715 PF02583 Metal-sensitive transcriptional repressor AC613_03720 PF00107 Zinc-binding dehydrogenase AC613_03720 PF08240 Alcohol dehydrogenase GroES-like domain AC613_03725 PF04828 Glutathione-dependent formaldehyde-activating enzyme AC613_03730 PF00756 Putative esterase AC613_03735 PF00392 Bacterial regulatory proteins, gntR family AC613_03735 PF00155 Aminotransferase class I and II AC613_03740 PF02567 Phenazine biosynthesis-like protein AC613_03755 PF12848 ABC transporter AC613_03755 PF00005 ABC transporter AC613_03765 PF00464 Serine hydroxymethyltransferase AC613_03770 PF03477 ATP cone domain AC613_03780 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AC613_03780 PF01872 RibD C-terminal domain AC613_03790 PF00677 Lumazine binding domain AC613_03795 PF00925 GTP cyclohydrolase II AC613_03795 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AC613_03800 PF00885 6,7-dimethyl-8-ribityllumazine synthase AC613_03805 PF01029 NusB family AC613_03810 PF02769 AIR synthase related protein, C-terminal domain AC613_03810 PF00586 AIR synthase related protein, N-terminal domain AC613_03830 PF03814 Potassium-transporting ATPase A subunit AC613_03840 PF02669 K+-transporting ATPase, c chain AC613_03845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_03845 PF00512 His Kinase A (phospho-acceptor) domain AC613_03845 PF02702 Osmosensitive K+ channel His kinase sensor domain AC613_03845 PF13492 GAF domain AC613_03845 PF13493 Domain of unknown function (DUF4118) AC613_03850 PF00072 Response regulator receiver domain AC613_03850 PF00486 Transcriptional regulatory protein, C terminal AC613_03855 PF01565 FAD binding domain AC613_03855 PF02913 FAD linked oxidases, C-terminal domain AC613_03860 PF04307 LexA-binding, inner membrane-associated putative hydrolase AC613_03865 PF02021 Uncharacterised protein family UPF0102 AC613_03875 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AC613_03885 PF02381 MraZ protein, putative antitoxin-like AC613_03890 PF01795 MraW methylase family AC613_03895 PF04999 Cell division protein FtsL AC613_03900 PF00905 Penicillin binding protein transpeptidase domain AC613_03900 PF03717 Penicillin-binding Protein dimerisation domain AC613_03905 PF08245 Mur ligase middle domain AC613_03905 PF01225 Mur ligase family, catalytic domain AC613_03905 PF02875 Mur ligase family, glutamate ligase domain AC613_03910 PF02875 Mur ligase family, glutamate ligase domain AC613_03910 PF08245 Mur ligase middle domain AC613_03910 PF01225 Mur ligase family, catalytic domain AC613_03915 PF00953 Glycosyl transferase family 4 AC613_03920 PF01098 Cell cycle protein AC613_03925 PF04101 Glycosyltransferase family 28 C-terminal domain AC613_03925 PF03033 Glycosyltransferase family 28 N-terminal domain AC613_03930 PF02875 Mur ligase family, glutamate ligase domain AC613_03930 PF01225 Mur ligase family, catalytic domain AC613_03930 PF08245 Mur ligase middle domain AC613_03935 PF01820 D-ala D-ala ligase N-terminus AC613_03935 PF07478 D-ala D-ala ligase C-terminus AC613_03940 PF08478 POTRA domain, FtsQ-type AC613_03940 PF03799 Cell division protein FtsQ AC613_03945 PF02491 SHS2 domain inserted in FTSA AC613_03950 PF12327 FtsZ family, C-terminal domain AC613_03950 PF00091 Tubulin/FtsZ family, GTPase domain AC613_03955 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AC613_03965 PF01476 LysM domain AC613_03965 PF08525 Opacity-associated protein A N-terminal motif AC613_03965 PF01551 Peptidase family M23 AC613_03970 PF01043 SecA preprotein cross-linking domain AC613_03970 PF07517 SecA DEAD-like domain AC613_03970 PF02810 SEC-C motif AC613_03970 PF07516 SecA Wing and Scaffold domain AC613_03975 PF00293 NUDIX domain AC613_03985 PF02219 Methylenetetrahydrofolate reductase AC613_03995 PF00698 Acyl transferase domain AC613_03995 PF14765 Polyketide synthase dehydratase AC613_03995 PF00550 Phosphopantetheine attachment site AC613_03995 PF00107 Zinc-binding dehydrogenase AC613_03995 PF02801 Beta-ketoacyl synthase, C-terminal domain AC613_03995 PF08240 Alcohol dehydrogenase GroES-like domain AC613_03995 PF00109 Beta-ketoacyl synthase, N-terminal domain AC613_03995 PF16197 Ketoacyl-synthetase C-terminal extension AC613_03995 PF08659 KR domain AC613_04000 PF00082 Subtilase family AC613_04000 PF09286 Pro-kumamolisin, activation domain AC613_04010 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AC613_04015 PF00128 Alpha amylase, catalytic domain AC613_04040 PF00685 Sulfotransferase domain AC613_04050 PF13649 Methyltransferase domain AC613_04055 PF05221 S-adenosyl-L-homocysteine hydrolase AC613_04055 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AC613_04065 PF00311 Phosphoenolpyruvate carboxylase AC613_04085 PF01389 OmpA-like transmembrane domain AC613_04085 PF00691 OmpA family AC613_04100 PF00328 Histidine phosphatase superfamily (branch 2) AC613_04105 PF00438 S-adenosylmethionine synthetase, N-terminal domain AC613_04105 PF02773 S-adenosylmethionine synthetase, C-terminal domain AC613_04105 PF02772 S-adenosylmethionine synthetase, central domain AC613_04115 PF13649 Methyltransferase domain AC613_04120 PF01207 Dihydrouridine synthase (Dus) AC613_04130 PF00294 pfkB family carbohydrate kinase AC613_04135 PF01773 Na+ dependent nucleoside transporter N-terminus AC613_04135 PF07670 Nucleoside recognition AC613_04135 PF07662 Na+ dependent nucleoside transporter C-terminus AC613_04145 PF00248 Aldo/keto reductase family AC613_04155 PF07715 TonB-dependent Receptor Plug Domain AC613_04155 PF00593 TonB dependent receptor AC613_04175 PF00528 Binding-protein-dependent transport system inner membrane component AC613_04180 PF00005 ABC transporter AC613_04190 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AC613_04200 PF00005 ABC transporter AC613_04205 PF13472 GDSL-like Lipase/Acylhydrolase family AC613_04210 PF00072 Response regulator receiver domain AC613_04210 PF00486 Transcriptional regulatory protein, C terminal AC613_04215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_04215 PF00512 His Kinase A (phospho-acceptor) domain AC613_04215 PF08521 Two-component sensor kinase N-terminal AC613_04225 PF01219 Prokaryotic diacylglycerol kinase AC613_04245 PF01790 Prolipoprotein diacylglyceryl transferase AC613_04250 PF00303 Thymidylate synthase AC613_04260 PF00186 Dihydrofolate reductase AC613_04265 PF00158 Sigma-54 interaction domain AC613_04270 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AC613_04270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC613_04275 PF00005 ABC transporter AC613_04280 PF00528 Binding-protein-dependent transport system inner membrane component AC613_04290 PF00296 Luciferase-like monooxygenase AC613_04295 PF03358 NADPH-dependent FMN reductase AC613_04315 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AC613_04320 PF00528 Binding-protein-dependent transport system inner membrane component AC613_04330 PF00005 ABC transporter AC613_04330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AC613_04335 PF00149 Calcineurin-like phosphoesterase AC613_04340 PF04379 ApaG domain AC613_04345 PF00398 Ribosomal RNA adenine dimethylase AC613_04350 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AC613_04355 PF00639 PPIC-type PPIASE domain AC613_04355 PF09312 SurA N-terminal domain AC613_04360 PF04453 LPS transport system D AC613_04360 PF03968 OstA-like protein AC613_04375 PF00850 Histone deacetylase domain AC613_04380 PF01923 Cobalamin adenosyltransferase AC613_04390 PF01494 FAD binding domain AC613_04395 PF01494 FAD binding domain AC613_04415 PF00392 Bacterial regulatory proteins, gntR family AC613_04415 PF07729 FCD domain AC613_04420 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AC613_04425 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit AC613_04425 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AC613_04430 PF03466 LysR substrate binding domain AC613_04430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC613_04440 PF00171 Aldehyde dehydrogenase family AC613_04445 PF00378 Enoyl-CoA hydratase/isomerase AC613_04470 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AC613_04470 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AC613_04475 PF01728 FtsJ-like methyltransferase AC613_04475 PF18125 RlmM ferredoxin-like domain AC613_04500 PF00892 EamA-like transporter family AC613_04510 PF00749 tRNA synthetases class I (E and Q), catalytic domain AC613_04510 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AC613_04525 PF00990 Diguanylate cyclase, GGDEF domain AC613_04525 PF00072 Response regulator receiver domain AC613_04530 PF00072 Response regulator receiver domain AC613_04530 PF00512 His Kinase A (phospho-acceptor) domain AC613_04530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_04530 PF00672 HAMP domain AC613_04530 PF17149 Periplasmic sensor domain found in signal transduction proteins AC613_04530 PF01627 Hpt domain AC613_04535 PF00072 Response regulator receiver domain AC613_04535 PF00196 Bacterial regulatory proteins, luxR family AC613_04545 PF01625 Peptide methionine sulfoxide reductase AC613_04555 PF00923 Transaldolase/Fructose-6-phosphate aldolase AC613_04560 PF14760 Rnk N-terminus AC613_04560 PF01272 Transcription elongation factor, GreA/GreB, C-term AC613_04565 PF03466 LysR substrate binding domain AC613_04565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC613_04570 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC613_04570 PF13192 Thioredoxin domain AC613_04575 PF00578 AhpC/TSA family AC613_04575 PF10417 C-terminal domain of 1-Cys peroxiredoxin AC613_04580 PF17827 PrmC N-terminal domain AC613_04580 PF05175 Methyltransferase small domain AC613_04585 PF00561 alpha/beta hydrolase fold AC613_04595 PF00293 NUDIX domain AC613_04600 PF01612 3'-5' exonuclease AC613_04600 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AC613_04600 PF01367 5'-3' exonuclease, C-terminal SAM fold AC613_04600 PF00476 DNA polymerase family A AC613_04620 PF01609 Transposase DDE domain AC613_04620 PF05598 Transposase domain (DUF772) AC613_04635 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AC613_04635 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AC613_04635 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AC613_04655 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AC613_04660 PF02233 NAD(P) transhydrogenase beta subunit AC613_04675 PF01063 Amino-transferase class IV AC613_04680 PF00082 Subtilase family AC613_04680 PF04151 Bacterial pre-peptidase C-terminal domain AC613_04685 PF04151 Bacterial pre-peptidase C-terminal domain AC613_04685 PF00082 Subtilase family AC613_04690 PF04151 Bacterial pre-peptidase C-terminal domain AC613_04690 PF00082 Subtilase family AC613_04695 PF04073 Aminoacyl-tRNA editing domain AC613_04715 PF03358 NADPH-dependent FMN reductase AC613_04720 PF03631 Virulence factor BrkB AC613_04725 PF08534 Redoxin AC613_04730 PF00708 Acylphosphatase AC613_04740 PF03976 Polyphosphate kinase 2 (PPK2) AC613_04745 PF00994 Probable molybdopterin binding domain AC613_04755 PF03462 PCRF domain AC613_04755 PF00472 RF-1 domain AC613_04760 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AC613_04760 PF01488 Shikimate / quinate 5-dehydrogenase AC613_04760 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AC613_04770 PF03550 Outer membrane lipoprotein LolB AC613_04775 PF00288 GHMP kinases N terminal domain AC613_04775 PF08544 GHMP kinases C terminal AC613_04785 PF14572 Phosphoribosyl synthetase-associated domain AC613_04785 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AC613_04790 PF14693 Ribosomal protein TL5, C-terminal domain AC613_04790 PF01386 Ribosomal L25p family AC613_04795 PF01195 Peptidyl-tRNA hydrolase AC613_04800 PF01926 50S ribosome-binding GTPase AC613_04800 PF06071 Protein of unknown function (DUF933) AC613_04820 PF00009 Elongation factor Tu GTP binding domain AC613_04820 PF03144 Elongation factor Tu domain 2 AC613_04820 PF03143 Elongation factor Tu C-terminal domain AC613_04830 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AC613_04835 PF02357 Transcription termination factor nusG AC613_04835 PF00467 KOW motif AC613_04840 PF00298 Ribosomal protein L11, RNA binding domain AC613_04840 PF03946 Ribosomal protein L11, N-terminal domain AC613_04845 PF00687 Ribosomal protein L1p/L10e family AC613_04850 PF00466 Ribosomal protein L10 AC613_04855 PF00542 Ribosomal protein L7/L12 C-terminal domain AC613_04855 PF16320 Ribosomal protein L7/L12 dimerisation domain AC613_04860 PF04560 RNA polymerase Rpb2, domain 7 AC613_04860 PF10385 RNA polymerase beta subunit external 1 domain AC613_04860 PF04563 RNA polymerase beta subunit AC613_04860 PF04561 RNA polymerase Rpb2, domain 2 AC613_04860 PF00562 RNA polymerase Rpb2, domain 6 AC613_04860 PF04565 RNA polymerase Rpb2, domain 3 AC613_04865 PF04998 RNA polymerase Rpb1, domain 5 AC613_04865 PF04997 RNA polymerase Rpb1, domain 1 AC613_04865 PF05000 RNA polymerase Rpb1, domain 4 AC613_04865 PF00623 RNA polymerase Rpb1, domain 2 AC613_04865 PF04983 RNA polymerase Rpb1, domain 3 AC613_04870 PF00164 Ribosomal protein S12/S23 AC613_04875 PF00177 Ribosomal protein S7p/S5e AC613_04880 PF03144 Elongation factor Tu domain 2 AC613_04880 PF00679 Elongation factor G C-terminus AC613_04880 PF00009 Elongation factor Tu GTP binding domain AC613_04880 PF14492 Elongation Factor G, domain II AC613_04880 PF03764 Elongation factor G, domain IV AC613_04885 PF00009 Elongation factor Tu GTP binding domain AC613_04885 PF03143 Elongation factor Tu C-terminal domain AC613_04885 PF03144 Elongation factor Tu domain 2 AC613_04890 PF00338 Ribosomal protein S10p/S20e AC613_04895 PF00297 Ribosomal protein L3 AC613_04900 PF00573 Ribosomal protein L4/L1 family AC613_04905 PF00276 Ribosomal protein L23 AC613_04910 PF03947 Ribosomal Proteins L2, C-terminal domain AC613_04910 PF00181 Ribosomal Proteins L2, RNA binding domain AC613_04915 PF00203 Ribosomal protein S19 AC613_04920 PF00237 Ribosomal protein L22p/L17e AC613_04925 PF00189 Ribosomal protein S3, C-terminal domain AC613_04925 PF07650 KH domain AC613_04930 PF00252 Ribosomal protein L16p/L10e AC613_04935 PF00831 Ribosomal L29 protein AC613_04940 PF00366 Ribosomal protein S17 AC613_04945 PF00238 Ribosomal protein L14p/L23e AC613_04950 PF00467 KOW motif AC613_04950 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AC613_04955 PF00673 ribosomal L5P family C-terminus AC613_04955 PF00281 Ribosomal protein L5 AC613_04960 PF00253 Ribosomal protein S14p/S29e AC613_04965 PF00410 Ribosomal protein S8 AC613_04970 PF00347 Ribosomal protein L6 AC613_04975 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AC613_04980 PF03719 Ribosomal protein S5, C-terminal domain AC613_04980 PF00333 Ribosomal protein S5, N-terminal domain AC613_04985 PF00327 Ribosomal protein L30p/L7e AC613_04990 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AC613_04995 PF00344 SecY translocase AC613_05000 PF00416 Ribosomal protein S13/S18 AC613_05005 PF00411 Ribosomal protein S11 AC613_05010 PF01479 S4 domain AC613_05010 PF00163 Ribosomal protein S4/S9 N-terminal domain AC613_05015 PF01000 RNA polymerase Rpb3/RpoA insert domain AC613_05015 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AC613_05015 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AC613_05020 PF01196 Ribosomal protein L17 AC613_05025 PF02600 Disulfide bond formation protein DsbB AC613_05040 PF01474 Class-II DAHP synthetase family AC613_05050 PF01425 Amidase AC613_05065 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AC613_05070 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AC613_05070 PF00056 lactate/malate dehydrogenase, NAD binding domain AC613_05075 PF02798 Glutathione S-transferase, N-terminal domain AC613_05075 PF00043 Glutathione S-transferase, C-terminal domain AC613_05090 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AC613_05090 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC613_05095 PF08240 Alcohol dehydrogenase GroES-like domain AC613_05095 PF00107 Zinc-binding dehydrogenase AC613_05100 PF05736 OprF membrane domain AC613_05100 PF00691 OmpA family AC613_05110 PF00849 RNA pseudouridylate synthase AC613_05120 PF00155 Aminotransferase class I and II AC613_05130 PF00528 Binding-protein-dependent transport system inner membrane component AC613_05135 PF00528 Binding-protein-dependent transport system inner membrane component AC613_05140 PF00005 ABC transporter AC613_05140 PF17850 CysA C-terminal regulatory domain AC613_05140 PF12857 TOBE-like domain AC613_05150 PF00107 Zinc-binding dehydrogenase AC613_05150 PF08240 Alcohol dehydrogenase GroES-like domain AC613_05160 PF05506 Domain of unknown function (DUF756) AC613_05160 PF04185 Phosphoesterase family AC613_05165 PF10459 Peptidase S46 AC613_05170 PF00300 Histidine phosphatase superfamily (branch 1) AC613_05175 PF02875 Mur ligase family, glutamate ligase domain AC613_05175 PF08245 Mur ligase middle domain AC613_05190 PF00156 Phosphoribosyl transferase domain AC613_05195 PF04305 Protein of unknown function (DUF455) AC613_05210 PF00149 Calcineurin-like phosphoesterase AC613_05215 PF01569 PAP2 superfamily AC613_05220 PF00534 Glycosyl transferases group 1 AC613_05220 PF13439 Glycosyltransferase Family 4 AC613_05225 PF02541 Ppx/GppA phosphatase family AC613_05230 PF13089 Polyphosphate kinase N-terminal domain AC613_05230 PF13090 Polyphosphate kinase C-terminal domain 2 AC613_05230 PF02503 Polyphosphate kinase middle domain AC613_05230 PF17941 Polyphosphate kinase C-terminal domain 1 AC613_05235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_05235 PF00512 His Kinase A (phospho-acceptor) domain AC613_05235 PF00989 PAS fold AC613_05235 PF11808 Phosphate regulon sensor protein PhoR AC613_05240 PF00072 Response regulator receiver domain AC613_05240 PF00486 Transcriptional regulatory protein, C terminal AC613_05245 PF01435 Peptidase family M48 AC613_05245 PF13181 Tetratricopeptide repeat AC613_05250 PF00462 Glutaredoxin AC613_05260 PF00180 Isocitrate/isopropylmalate dehydrogenase AC613_05300 PF05698 Bacterial trigger factor protein (TF) C-terminus AC613_05300 PF05697 Bacterial trigger factor protein (TF) AC613_05305 PF00574 Clp protease AC613_05310 PF07724 AAA domain (Cdc48 subfamily) AC613_05310 PF10431 C-terminal, D2-small domain, of ClpB protein AC613_05310 PF06689 ClpX C4-type zinc finger AC613_05315 PF02190 ATP-dependent protease La (LON) substrate-binding domain AC613_05315 PF05362 Lon protease (S16) C-terminal proteolytic domain AC613_05315 PF00004 ATPase family associated with various cellular activities (AAA) AC613_05320 PF00216 Bacterial DNA-binding protein AC613_05345 PF01476 LysM domain AC613_05345 PF05257 CHAP domain AC613_05350 PF00753 Metallo-beta-lactamase superfamily AC613_05350 PF16123 Hydroxyacylglutathione hydrolase C-terminus AC613_05360 PF00075 RNase H AC613_05365 PF00929 Exonuclease AC613_05385 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AC613_05395 PF12706 Beta-lactamase superfamily domain AC613_05395 PF00753 Metallo-beta-lactamase superfamily AC613_05400 PF04055 Radical SAM superfamily AC613_05400 PF06463 Molybdenum Cofactor Synthesis C AC613_05410 PF01967 MoaC family AC613_05415 PF02597 ThiS family AC613_05420 PF02391 MoaE protein AC613_05455 PF00872 Transposase, Mutator family AC613_05460 PF05598 Transposase domain (DUF772) AC613_05460 PF01609 Transposase DDE domain AC613_05470 PF00872 Transposase, Mutator family AC613_05485 PF12170 DNA polymerase III tau subunit V interacting with alpha AC613_05485 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AC613_05485 PF12169 DNA polymerase III subunits gamma and tau domain III AC613_05490 PF02575 YbaB/EbfC DNA-binding family AC613_05495 PF13662 Toprim domain AC613_05495 PF02132 RecR protein AC613_05500 PF01230 HIT domain AC613_05510 PF11992 Domain of unknown function (DUF3488) AC613_05510 PF01841 Transglutaminase-like superfamily AC613_05510 PF13559 Domain of unknown function (DUF4129) AC613_05520 PF17863 AAA lid domain AC613_05520 PF07726 ATPase family associated with various cellular activities (AAA) AC613_05540 PF02545 Maf-like protein AC613_05545 PF02620 Large ribosomal RNA subunit accumulation protein YceD AC613_05550 PF01783 Ribosomal L32p protein family AC613_05555 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AC613_05555 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AC613_05565 PF00698 Acyl transferase domain AC613_05575 PF00550 Phosphopantetheine attachment site AC613_05580 PF00109 Beta-ketoacyl synthase, N-terminal domain AC613_05580 PF02801 Beta-ketoacyl synthase, C-terminal domain AC613_05585 PF00425 chorismate binding enzyme AC613_05585 PF04715 Anthranilate synthase component I, N terminal region AC613_05590 PF02618 YceG-like family AC613_05595 PF09115 DNA polymerase III, delta subunit, C terminal AC613_05615 PF06506 Propionate catabolism activator AC613_05615 PF02954 Bacterial regulatory protein, Fis family AC613_05615 PF00158 Sigma-54 interaction domain AC613_05625 PF00285 Citrate synthase, C-terminal domain AC613_05630 PF00330 Aconitase family (aconitate hydratase) AC613_05630 PF00694 Aconitase C-terminal domain AC613_05635 PF04303 PrpF protein AC613_05640 PF00593 TonB dependent receptor AC613_05640 PF07715 TonB-dependent Receptor Plug Domain AC613_05650 PF17962 Bacterial macroglobulin domain 6 AC613_05650 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AC613_05650 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AC613_05650 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AC613_05650 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain AC613_05650 PF01835 MG2 domain AC613_05650 PF00207 Alpha-2-macroglobulin family AC613_05650 PF07703 Alpha-2-macroglobulin bait region domain AC613_05665 PF06832 Penicillin-Binding Protein C-terminus Family AC613_05665 PF00905 Penicillin binding protein transpeptidase domain AC613_05665 PF00912 Transglycosylase AC613_05675 PF08534 Redoxin AC613_05685 PF01556 DnaJ C terminal domain AC613_05685 PF00226 DnaJ domain AC613_05690 PF00072 Response regulator receiver domain AC613_05695 PF12221 Bacterial membrane protein N terminal AC613_05695 PF01145 SPFH domain / Band 7 family AC613_05700 PF01145 SPFH domain / Band 7 family AC613_05710 PF00709 Adenylosuccinate synthetase AC613_05730 PF00440 Bacterial regulatory proteins, tetR family AC613_05740 PF00872 Transposase, Mutator family AC613_05745 PF02384 N-6 DNA Methylase AC613_05750 PF08780 Nucleotidyltransferase substrate binding protein like AC613_05760 PF01609 Transposase DDE domain AC613_05760 PF05598 Transposase domain (DUF772) AC613_05765 PF01420 Type I restriction modification DNA specificity domain AC613_05780 PF01609 Transposase DDE domain AC613_05780 PF05598 Transposase domain (DUF772) AC613_05785 PF18766 SWI2/SNF2 ATPase AC613_05785 PF11867 Domain of unknown function (DUF3387) AC613_05785 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AC613_05810 PF13456 Reverse transcriptase-like AC613_05810 PF00300 Histidine phosphatase superfamily (branch 1) AC613_05815 PF01256 Carbohydrate kinase AC613_05825 PF00723 Glycosyl hydrolases family 15 AC613_05835 PF00872 Transposase, Mutator family AC613_05840 PF17678 Glycosyl hydrolase family 92 N-terminal domain AC613_05840 PF07971 Glycosyl hydrolase family 92 AC613_05845 PF00106 short chain dehydrogenase AC613_05860 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC613_05880 PF17755 UvrA DNA-binding domain AC613_05890 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AC613_05890 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AC613_05895 PF03450 CO dehydrogenase flavoprotein C-terminal domain AC613_05895 PF00941 FAD binding domain in molybdopterin dehydrogenase AC613_05900 PF01799 [2Fe-2S] binding domain AC613_05900 PF00111 2Fe-2S iron-sulfur cluster binding domain AC613_05935 PF01726 LexA DNA binding domain AC613_05935 PF00717 Peptidase S24-like AC613_05955 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AC613_05955 PF14579 Helix-hairpin-helix motif AC613_05955 PF02811 PHP domain AC613_05955 PF07733 Bacterial DNA polymerase III alpha NTPase domain AC613_05970 PF03169 OPT oligopeptide transporter protein AC613_05985 PF00326 Prolyl oligopeptidase family AC613_05985 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AC613_05985 PF07676 WD40-like Beta Propeller Repeat AC613_06000 PF12833 Helix-turn-helix domain AC613_06000 PF02311 AraC-like ligand binding domain AC613_06020 PF00199 Catalase AC613_06020 PF18011 C-terminal domain found in long catalases AC613_06020 PF06628 Catalase-related immune-responsive AC613_06025 PF00248 Aldo/keto reductase family AC613_06030 PF00135 Carboxylesterase family AC613_06035 PF02347 Glycine cleavage system P-protein AC613_06040 PF07690 Major Facilitator Superfamily AC613_06055 PF00884 Sulfatase AC613_06055 PF08019 Phosphoethanolamine transferase EptA/EptB AC613_06070 PF00072 Response regulator receiver domain AC613_06070 PF00486 Transcriptional regulatory protein, C terminal AC613_06075 PF00512 His Kinase A (phospho-acceptor) domain AC613_06075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_06075 PF08521 Two-component sensor kinase N-terminal AC613_06085 PF03776 Septum formation topological specificity factor MinE AC613_06090 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AC613_06095 PF03775 Septum formation inhibitor MinC, C-terminal domain AC613_06095 PF05209 Septum formation inhibitor MinC, N-terminal domain AC613_06105 PF07730 Histidine kinase AC613_06110 PF00072 Response regulator receiver domain AC613_06110 PF00196 Bacterial regulatory proteins, luxR family AC613_06125 PF00730 HhH-GPD superfamily base excision DNA repair protein AC613_06150 PF02222 ATP-grasp domain AC613_06160 PF04377 Arginine-tRNA-protein transferase, C terminus AC613_06160 PF04376 Arginine-tRNA-protein transferase, N terminus AC613_06185 PF00378 Enoyl-CoA hydratase/isomerase AC613_06200 PF17760 UvrA interaction domain AC613_06200 PF00005 ABC transporter AC613_06200 PF17755 UvrA DNA-binding domain AC613_06205 PF00829 Ribosomal prokaryotic L21 protein AC613_06210 PF01016 Ribosomal L27 protein AC613_06215 PF01018 GTP1/OBG AC613_06215 PF01926 50S ribosome-binding GTPase AC613_06220 PF01649 Ribosomal protein S20 AC613_06225 PF03023 Lipid II flippase MurJ AC613_06230 PF06574 FAD synthetase AC613_06230 PF01687 Riboflavin kinase AC613_06235 PF06827 Zinc finger found in FPG and IleRS AC613_06235 PF08264 Anticodon-binding domain of tRNA AC613_06235 PF00133 tRNA synthetases class I (I, L, M and V) AC613_06240 PF01252 Signal peptidase (SPase) II AC613_06245 PF02401 LytB protein AC613_06275 PF00872 Transposase, Mutator family AC613_06290 PF06481 COX Aromatic Rich Motif AC613_06290 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AC613_06295 PF00115 Cytochrome C and Quinol oxidase polypeptide I AC613_06300 PF00510 Cytochrome c oxidase subunit III AC613_06305 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AC613_06315 PF18073 Rubredoxin metal binding domain AC613_06325 PF00872 Transposase, Mutator family AC613_06330 PF00872 Transposase, Mutator family AC613_06335 PF05656 Protein of unknown function (DUF805) AC613_06345 PF12833 Helix-turn-helix domain AC613_06350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_06350 PF00183 Hsp90 protein AC613_06360 PF01740 STAS domain AC613_06360 PF08678 Rsbr N terminal AC613_06365 PF01740 STAS domain AC613_06370 PF13581 Histidine kinase-like ATPase domain AC613_06380 PF17149 Periplasmic sensor domain found in signal transduction proteins AC613_06380 PF00072 Response regulator receiver domain AC613_06380 PF01627 Hpt domain AC613_06380 PF00512 His Kinase A (phospho-acceptor) domain AC613_06380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_06380 PF00672 HAMP domain AC613_06385 PF13188 PAS domain AC613_06385 PF08448 PAS fold AC613_06385 PF00512 His Kinase A (phospho-acceptor) domain AC613_06385 PF00072 Response regulator receiver domain AC613_06385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_06395 PF00593 TonB dependent receptor AC613_06395 PF07715 TonB-dependent Receptor Plug Domain AC613_06400 PF00085 Thioredoxin AC613_06405 PF07237 Protein of unknown function (DUF1428) AC613_06415 PF00512 His Kinase A (phospho-acceptor) domain AC613_06415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_06415 PF02702 Osmosensitive K+ channel His kinase sensor domain AC613_06415 PF13492 GAF domain AC613_06415 PF13493 Domain of unknown function (DUF4118) AC613_06420 PF01339 CheB methylesterase AC613_06425 PF03705 CheR methyltransferase, all-alpha domain AC613_06425 PF01739 CheR methyltransferase, SAM binding domain AC613_06430 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AC613_06430 PF00512 His Kinase A (phospho-acceptor) domain AC613_06430 PF00072 Response regulator receiver domain AC613_06430 PF01627 Hpt domain AC613_06430 PF00672 HAMP domain AC613_06430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_06435 PF13426 PAS domain AC613_06435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_06435 PF00072 Response regulator receiver domain AC613_06440 PF00072 Response regulator receiver domain AC613_06450 PF00872 Transposase, Mutator family AC613_06455 PF05598 Transposase domain (DUF772) AC613_06455 PF01609 Transposase DDE domain AC613_06465 PF05188 MutS domain II AC613_06465 PF00488 MutS domain V AC613_06465 PF05190 MutS family domain IV AC613_06465 PF05192 MutS domain III AC613_06465 PF01624 MutS domain I AC613_06475 PF00141 Peroxidase AC613_06480 PF01479 S4 domain AC613_06500 PF01554 MatE AC613_06505 PF01245 Ribosomal protein L19 AC613_06510 PF01746 tRNA (Guanine-1)-methyltransferase AC613_06515 PF01782 RimM N-terminal domain AC613_06515 PF05239 PRC-barrel domain AC613_06520 PF00886 Ribosomal protein S16 AC613_06530 PF03060 Nitronate monooxygenase AC613_06540 PF00448 SRP54-type protein, GTPase domain AC613_06540 PF02978 Signal peptide binding domain AC613_06540 PF02881 SRP54-type protein, helical bundle domain AC613_06545 PF01578 Cytochrome C assembly protein AC613_06550 PF01263 Aldose 1-epimerase AC613_06560 PF06964 Alpha-L-arabinofuranosidase C-terminal domain AC613_06570 PF00872 Transposase, Mutator family AC613_06575 PF01527 Transposase AC613_06590 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AC613_06590 PF16355 Domain of unknown function (DUF4982) AC613_06590 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 AC613_06590 PF00703 Glycosyl hydrolases family 2 AC613_06590 PF02837 Glycosyl hydrolases family 2, sugar binding domain AC613_06595 PF07745 Glycosyl hydrolase family 53 AC613_06605 PF09856 Predicted transcriptional regulator (DUF2083) AC613_06605 PF06114 IrrE N-terminal-like domain AC613_06605 PF01381 Helix-turn-helix AC613_06610 PF00171 Aldehyde dehydrogenase family AC613_06615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC613_06615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC613_06615 PF02770 Acyl-CoA dehydrogenase, middle domain AC613_06620 PF00378 Enoyl-CoA hydratase/isomerase AC613_06625 PF00378 Enoyl-CoA hydratase/isomerase AC613_06625 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AC613_06625 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AC613_06630 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AC613_06630 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AC613_06635 PF01545 Cation efflux family AC613_06655 PF01121 Dephospho-CoA kinase AC613_06660 PF06750 Bacterial Peptidase A24 N-terminal domain AC613_06660 PF01478 Type IV leader peptidase family AC613_06665 PF00482 Type II secretion system (T2SS), protein F AC613_06670 PF07963 Prokaryotic N-terminal methylation motif AC613_06670 PF00114 Pilin (bacterial filament) AC613_06680 PF07963 Prokaryotic N-terminal methylation motif AC613_06680 PF00114 Pilin (bacterial filament) AC613_06685 PF00437 Type II/IV secretion system protein AC613_06685 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AC613_06690 PF00072 Response regulator receiver domain AC613_06690 PF00158 Sigma-54 interaction domain AC613_06690 PF02954 Bacterial regulatory protein, Fis family AC613_06700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_06700 PF00512 His Kinase A (phospho-acceptor) domain AC613_06705 PF00549 CoA-ligase AC613_06705 PF08442 ATP-grasp domain AC613_06710 PF02629 CoA binding domain AC613_06710 PF00549 CoA-ligase AC613_06715 PF00872 Transposase, Mutator family AC613_06725 PF00795 Carbon-nitrogen hydrolase AC613_06725 PF02540 NAD synthase AC613_06735 PF13525 Outer membrane lipoprotein AC613_06740 PF00849 RNA pseudouridylate synthase AC613_06755 PF04134 Protein of unknown function, DUF393 AC613_06760 PF02203 Tar ligand binding domain homologue AC613_06760 PF00672 HAMP domain AC613_06760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC613_06765 PF01011 PQQ enzyme repeat AC613_06770 PF00982 Glycosyltransferase family 20 AC613_06775 PF00723 Glycosyl hydrolases family 15 AC613_06780 PF02358 Trehalose-phosphatase AC613_06785 PF07715 TonB-dependent Receptor Plug Domain AC613_06785 PF00593 TonB dependent receptor AC613_06820 PF01541 GIY-YIG catalytic domain AC613_06825 PF00593 TonB dependent receptor AC613_06825 PF07715 TonB-dependent Receptor Plug Domain AC613_06835 PF00248 Aldo/keto reductase family AC613_06840 PF09084 NMT1/THI5 like AC613_06845 PF00528 Binding-protein-dependent transport system inner membrane component AC613_06850 PF00005 ABC transporter AC613_06855 PF10431 C-terminal, D2-small domain, of ClpB protein AC613_06855 PF02861 Clp amino terminal domain, pathogenicity island component AC613_06855 PF00004 ATPase family associated with various cellular activities (AAA) AC613_06855 PF17871 AAA lid domain AC613_06855 PF07724 AAA domain (Cdc48 subfamily) AC613_06865 PF00593 TonB dependent receptor AC613_06865 PF07715 TonB-dependent Receptor Plug Domain AC613_06885 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AC613_06885 PF12557 Cob(I)alamin adenosyltransferase N terminal AC613_06890 PF03186 CobD/Cbib protein AC613_06890 PF17113 Regulatory signalling modulator protein AmpE AC613_06900 PF07685 CobB/CobQ-like glutamine amidotransferase domain AC613_06900 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AC613_06905 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AC613_06910 PF02277 Phosphoribosyltransferase AC613_06920 PF02654 Cobalamin-5-phosphate synthase AC613_06935 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AC613_06935 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AC613_06945 PF07690 Major Facilitator Superfamily AC613_06950 PF04183 IucA / IucC family AC613_06950 PF06276 Ferric iron reductase FhuF-like transporter AC613_06960 PF07660 Secretin and TonB N terminus short domain AC613_06960 PF07715 TonB-dependent Receptor Plug Domain AC613_06960 PF00593 TonB dependent receptor AC613_06970 PF00999 Sodium/hydrogen exchanger family AC613_06970 PF02254 TrkA-N domain AC613_06980 PF00593 TonB dependent receptor AC613_06980 PF07715 TonB-dependent Receptor Plug Domain AC613_06985 PF07715 TonB-dependent Receptor Plug Domain AC613_06985 PF00593 TonB dependent receptor AC613_06995 PF00593 TonB dependent receptor AC613_06995 PF07715 TonB-dependent Receptor Plug Domain AC613_07000 PF12848 ABC transporter AC613_07000 PF00005 ABC transporter AC613_07010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC613_07010 PF03466 LysR substrate binding domain AC613_07025 PF04185 Phosphoesterase family AC613_07025 PF05506 Domain of unknown function (DUF756) AC613_07035 PF07690 Major Facilitator Superfamily AC613_07050 PF01336 OB-fold nucleic acid binding domain AC613_07050 PF00152 tRNA synthetases class II (D, K and N) AC613_07050 PF02938 GAD domain AC613_07065 PF01709 Transcriptional regulator AC613_07070 PF02075 Crossover junction endodeoxyribonuclease RuvC AC613_07075 PF01330 RuvA N terminal domain AC613_07075 PF07499 RuvA, C-terminal domain AC613_07080 PF02705 K+ potassium transporter AC613_07085 PF05491 RuvB C-terminal winged helix domain AC613_07085 PF17864 RuvB AAA lid domain AC613_07085 PF05496 Holliday junction DNA helicase RuvB P-loop domain AC613_07090 PF03061 Thioesterase superfamily AC613_07095 PF01618 MotA/TolQ/ExbB proton channel family AC613_07100 PF02472 Biopolymer transport protein ExbD/TolR AC613_07110 PF07676 WD40-like Beta Propeller Repeat AC613_07110 PF04052 TolB amino-terminal domain AC613_07115 PF00691 OmpA family AC613_07125 PF04055 Radical SAM superfamily AC613_07135 PF06508 Queuosine biosynthesis protein QueC AC613_07140 PF07536 HWE histidine kinase AC613_07140 PF13426 PAS domain AC613_07140 PF13581 Histidine kinase-like ATPase domain AC613_07160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC613_07160 PF00672 HAMP domain AC613_07160 PF02203 Tar ligand binding domain homologue AC613_07170 PF01527 Transposase AC613_07205 PF00271 Helicase conserved C-terminal domain AC613_07205 PF09382 RQC domain AC613_07205 PF16124 RecQ zinc-binding AC613_07205 PF00270 DEAD/DEAH box helicase AC613_07205 PF00570 HRDC domain AC613_07210 PF00210 Ferritin-like domain AC613_07215 PF00271 Helicase conserved C-terminal domain AC613_07215 PF11898 Domain of unknown function (DUF3418) AC613_07215 PF04408 Helicase associated domain (HA2) AC613_07215 PF00270 DEAD/DEAH box helicase AC613_07215 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AC613_07225 PF02685 Glucokinase AC613_07240 PF04055 Radical SAM superfamily AC613_07240 PF13186 Iron-sulfur cluster-binding domain AC613_07245 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AC613_07250 PF03070 TENA/THI-4/PQQC family AC613_07255 PF12706 Beta-lactamase superfamily domain AC613_07260 PF13291 ACT domain AC613_07260 PF04607 Region found in RelA / SpoT proteins AC613_07260 PF02824 TGS domain AC613_07270 PF00535 Glycosyl transferase family 2 AC613_07275 PF00905 Penicillin binding protein transpeptidase domain AC613_07275 PF00912 Transglycosylase AC613_07275 PF14814 Bifunctional transglycosylase second domain AC613_07285 PF13307 Helicase C-terminal domain AC613_07285 PF04851 Type III restriction enzyme, res subunit AC613_07290 PF00814 Glycoprotease family AC613_07295 PF03747 ADP-ribosylglycohydrolase AC613_07305 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AC613_07305 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AC613_07310 PF00072 Response regulator receiver domain AC613_07315 PF00072 Response regulator receiver domain AC613_07320 PF01584 CheW-like domain AC613_07325 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AC613_07325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC613_07330 PF00072 Response regulator receiver domain AC613_07330 PF01627 Hpt domain AC613_07330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_07330 PF01584 CheW-like domain AC613_07345 PF13302 Acetyltransferase (GNAT) domain AC613_07355 PF01112 Asparaginase AC613_07360 PF03932 CutC family AC613_07395 PF01301 Glycosyl hydrolases family 35 AC613_07400 PF07971 Glycosyl hydrolase family 92 AC613_07400 PF17678 Glycosyl hydrolase family 92 N-terminal domain AC613_07410 PF11975 Family 4 glycosyl hydrolase C-terminal domain AC613_07410 PF02056 Family 4 glycosyl hydrolase AC613_07420 PF13520 Amino acid permease AC613_07435 PF01527 Transposase AC613_07445 PF00933 Glycosyl hydrolase family 3 N terminal domain AC613_07445 PF14310 Fibronectin type III-like domain AC613_07445 PF07691 PA14 domain AC613_07445 PF01915 Glycosyl hydrolase family 3 C-terminal domain AC613_07455 PF00728 Glycosyl hydrolase family 20, catalytic domain AC613_07455 PF02838 Glycosyl hydrolase family 20, domain 2 AC613_07455 PF07691 PA14 domain AC613_07460 PF00704 Glycosyl hydrolases family 18 AC613_07460 PF01476 LysM domain AC613_07475 PF02685 Glucokinase AC613_07480 PF04452 RNA methyltransferase AC613_07485 PF00202 Aminotransferase class-III AC613_07490 PF00293 NUDIX domain AC613_07495 PF00459 Inositol monophosphatase family AC613_07500 PF03819 MazG nucleotide pyrophosphohydrolase domain AC613_07505 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AC613_07515 PF01571 Aminomethyltransferase folate-binding domain AC613_07515 PF08669 Glycine cleavage T-protein C-terminal barrel domain AC613_07520 PF01597 Glycine cleavage H-protein AC613_07540 PF00872 Transposase, Mutator family AC613_07545 PF01527 Transposase AC613_07565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC613_07565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC613_07565 PF09317 Domain of unknown function (DUF1974) AC613_07570 PF00561 alpha/beta hydrolase fold AC613_07575 PF00440 Bacterial regulatory proteins, tetR family AC613_07580 PF01609 Transposase DDE domain AC613_07580 PF05598 Transposase domain (DUF772) AC613_07585 PF05598 Transposase domain (DUF772) AC613_07585 PF01609 Transposase DDE domain AC613_07590 PF00872 Transposase, Mutator family AC613_07595 PF07715 TonB-dependent Receptor Plug Domain AC613_07595 PF00593 TonB dependent receptor AC613_07605 PF01430 Hsp33 protein AC613_07610 PF00912 Transglycosylase AC613_07615 PF00535 Glycosyl transferase family 2 AC613_07620 PF00571 CBS domain AC613_07620 PF00478 IMP dehydrogenase / GMP reductase domain AC613_07625 PF05170 AsmA family AC613_07630 PF03006 Haemolysin-III related AC613_07635 PF16658 Class II release factor RF3, C-terminal domain AC613_07635 PF00009 Elongation factor Tu GTP binding domain AC613_07640 PF01476 LysM domain AC613_07640 PF01551 Peptidase family M23 AC613_07640 PF08525 Opacity-associated protein A N-terminal motif AC613_07645 PF00561 alpha/beta hydrolase fold AC613_07650 PF01053 Cys/Met metabolism PLP-dependent enzyme AC613_07655 PF00742 Homoserine dehydrogenase AC613_07655 PF00696 Amino acid kinase family AC613_07655 PF03447 Homoserine dehydrogenase, NAD binding domain AC613_07660 PF12697 Alpha/beta hydrolase family AC613_07665 PF03313 Serine dehydratase alpha chain AC613_07665 PF03315 Serine dehydratase beta chain AC613_07685 PF04264 YceI-like domain AC613_07690 PF00072 Response regulator receiver domain AC613_07690 PF01627 Hpt domain AC613_07690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_07690 PF00512 His Kinase A (phospho-acceptor) domain AC613_07695 PF00072 Response regulator receiver domain AC613_07695 PF00512 His Kinase A (phospho-acceptor) domain AC613_07695 PF00989 PAS fold AC613_07695 PF01627 Hpt domain AC613_07695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_07695 PF00497 Bacterial extracellular solute-binding proteins, family 3 AC613_07700 PF00672 HAMP domain AC613_07700 PF17149 Periplasmic sensor domain found in signal transduction proteins AC613_07700 PF01627 Hpt domain AC613_07700 PF00072 Response regulator receiver domain AC613_07700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_07700 PF00512 His Kinase A (phospho-acceptor) domain AC613_07705 PF00512 His Kinase A (phospho-acceptor) domain AC613_07705 PF00072 Response regulator receiver domain AC613_07705 PF01627 Hpt domain AC613_07705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_07705 PF00672 HAMP domain AC613_07705 PF17149 Periplasmic sensor domain found in signal transduction proteins AC613_07710 PF07690 Major Facilitator Superfamily AC613_07715 PF01208 Uroporphyrinogen decarboxylase (URO-D) AC613_07725 PF01761 3-dehydroquinate synthase AC613_07730 PF01202 Shikimate kinase AC613_07735 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AC613_07735 PF01243 Pyridoxamine 5'-phosphate oxidase AC613_07745 PF04012 PspA/IM30 family AC613_07770 PF03738 Glutathionylspermidine synthase preATP-grasp AC613_07775 PF07690 Major Facilitator Superfamily AC613_07780 PF00376 MerR family regulatory protein AC613_07780 PF09278 MerR, DNA binding AC613_07815 PF12706 Beta-lactamase superfamily domain AC613_07835 PF00324 Amino acid permease AC613_07840 PF00196 Bacterial regulatory proteins, luxR family AC613_07850 PF00561 alpha/beta hydrolase fold AC613_07860 PF00872 Transposase, Mutator family AC613_07865 PF00324 Amino acid permease AC613_07875 PF01654 Cytochrome bd terminal oxidase subunit I AC613_07880 PF02322 Cytochrome bd terminal oxidase subunit II AC613_07885 PF00756 Putative esterase AC613_07890 PF01769 Divalent cation transporter AC613_07890 PF00571 CBS domain AC613_07890 PF03448 MgtE intracellular N domain AC613_07895 PF02896 PEP-utilising enzyme, TIM barrel domain AC613_07895 PF00391 PEP-utilising enzyme, mobile domain AC613_07895 PF05524 PEP-utilising enzyme, N-terminal AC613_07900 PF00381 PTS HPr component phosphorylation site AC613_07910 PF03668 P-loop ATPase protein family AC613_07915 PF07475 HPr Serine kinase C-terminal domain AC613_07915 PF02603 HPr Serine kinase N terminus AC613_07920 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AC613_07925 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AC613_07930 PF04963 Sigma-54 factor, core binding domain AC613_07930 PF00309 Sigma-54 factor, Activator interacting domain (AID) AC613_07930 PF04552 Sigma-54, DNA binding domain AC613_07935 PF00005 ABC transporter AC613_07940 PF03968 OstA-like protein AC613_07955 PF00571 CBS domain AC613_07955 PF01380 SIS domain AC613_07960 PF01722 BolA-like protein AC613_07965 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AC613_07985 PF00551 Formyl transferase AC613_07995 PF02769 AIR synthase related protein, C-terminal domain AC613_07995 PF00586 AIR synthase related protein, N-terminal domain AC613_08005 PF01594 AI-2E family transporter AC613_08010 PF00308 Bacterial dnaA protein AC613_08015 PF00483 Nucleotidyl transferase AC613_08020 PF01636 Phosphotransferase enzyme family AC613_08045 PF00175 Oxidoreductase NAD-binding domain AC613_08045 PF00667 FAD binding domain AC613_08045 PF00258 Flavodoxin AC613_08050 PF02424 ApbE family AC613_08075 PF13640 2OG-Fe(II) oxygenase superfamily AC613_08075 PF18331 PKHD-type hydroxylase C-terminal domain AC613_08080 PF07715 TonB-dependent Receptor Plug Domain AC613_08080 PF00593 TonB dependent receptor AC613_08085 PF00355 Rieske [2Fe-2S] domain AC613_08095 PF00266 Aminotransferase class-V AC613_08100 PF01458 Uncharacterized protein family (UPF0051) AC613_08105 PF00005 ABC transporter AC613_08110 PF01458 Uncharacterized protein family (UPF0051) AC613_08115 PF02082 Transcriptional regulator AC613_08125 PF01965 DJ-1/PfpI family AC613_08145 PF01551 Peptidase family M23 AC613_08155 PF14748 Pyrroline-5-carboxylate reductase dimerisation AC613_08155 PF03807 NADP oxidoreductase coenzyme F420-dependent AC613_08160 PF01168 Alanine racemase, N-terminal domain AC613_08165 PF00437 Type II/IV secretion system protein AC613_08170 PF00437 Type II/IV secretion system protein AC613_08185 PF13302 Acetyltransferase (GNAT) domain AC613_08185 PF03352 Methyladenine glycosylase AC613_08185 PF13673 Acetyltransferase (GNAT) domain AC613_08185 PF00117 Glutamine amidotransferase class-I AC613_08185 PF00958 GMP synthase C terminal domain AC613_08195 PF02622 Uncharacterized ACR, COG1678 AC613_08200 PF03652 Holliday junction resolvase AC613_08205 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AC613_08205 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AC613_08210 PF02566 OsmC-like protein AC613_08220 PF02567 Phenazine biosynthesis-like protein AC613_08225 PF02567 Phenazine biosynthesis-like protein AC613_08230 PF01842 ACT domain AC613_08230 PF00696 Amino acid kinase family AC613_08245 PF02875 Mur ligase family, glutamate ligase domain AC613_08245 PF08245 Mur ligase middle domain AC613_08255 PF00348 Polyprenyl synthetase AC613_08260 PF00436 Single-strand binding protein family AC613_08265 PF00360 Phytochrome region AC613_08265 PF00563 EAL domain AC613_08265 PF00990 Diguanylate cyclase, GGDEF domain AC613_08265 PF01590 GAF domain AC613_08270 PF08240 Alcohol dehydrogenase GroES-like domain AC613_08270 PF16197 Ketoacyl-synthetase C-terminal extension AC613_08270 PF00109 Beta-ketoacyl synthase, N-terminal domain AC613_08270 PF08659 KR domain AC613_08270 PF00550 Phosphopantetheine attachment site AC613_08270 PF14765 Polyketide synthase dehydratase AC613_08270 PF00698 Acyl transferase domain AC613_08270 PF02801 Beta-ketoacyl synthase, C-terminal domain AC613_08270 PF00107 Zinc-binding dehydrogenase AC613_08275 PF10518 TAT (twin-arginine translocation) pathway signal sequence AC613_08275 PF01799 [2Fe-2S] binding domain AC613_08275 PF00111 2Fe-2S iron-sulfur cluster binding domain AC613_08280 PF03450 CO dehydrogenase flavoprotein C-terminal domain AC613_08280 PF00941 FAD binding domain in molybdopterin dehydrogenase AC613_08285 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AC613_08285 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AC613_08290 PF13478 XdhC Rossmann domain AC613_08290 PF02625 XdhC and CoxI family AC613_08340 PF04328 Selenoprotein, putative AC613_08345 PF13722 5TM C-terminal transporter carbon starvation CstA AC613_08345 PF02554 Carbon starvation protein CstA AC613_08350 PF05726 Pirin C-terminal cupin domain AC613_08350 PF02678 Pirin AC613_08365 PF02678 Pirin AC613_08365 PF05726 Pirin C-terminal cupin domain AC613_08370 PF00872 Transposase, Mutator family AC613_08380 PF04493 Endonuclease V AC613_08385 PF00300 Histidine phosphatase superfamily (branch 1) AC613_08395 PF05649 Peptidase family M13 AC613_08395 PF01431 Peptidase family M13 AC613_08400 PF13091 PLD-like domain AC613_08405 PF00072 Response regulator receiver domain AC613_08405 PF01339 CheB methylesterase AC613_08410 PF01739 CheR methyltransferase, SAM binding domain AC613_08410 PF03705 CheR methyltransferase, all-alpha domain AC613_08415 PF00563 EAL domain AC613_08415 PF13426 PAS domain AC613_08415 PF00990 Diguanylate cyclase, GGDEF domain AC613_08420 PF01584 CheW-like domain AC613_08425 PF00672 HAMP domain AC613_08425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC613_08425 PF02203 Tar ligand binding domain homologue AC613_08430 PF09078 CheY binding AC613_08430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_08430 PF02895 Signal transducing histidine kinase, homodimeric domain AC613_08430 PF01627 Hpt domain AC613_08430 PF01584 CheW-like domain AC613_08440 PF03461 TRCF domain AC613_08440 PF02559 CarD-like/TRCF domain AC613_08440 PF00271 Helicase conserved C-terminal domain AC613_08440 PF17757 UvrB interaction domain AC613_08440 PF00270 DEAD/DEAH box helicase AC613_08450 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AC613_08455 PF00072 Response regulator receiver domain AC613_08455 PF00486 Transcriptional regulatory protein, C terminal AC613_08460 PF00512 His Kinase A (phospho-acceptor) domain AC613_08460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_08460 PF00672 HAMP domain AC613_08475 PF06123 Inner membrane protein CreD AC613_08500 PF00749 tRNA synthetases class I (E and Q), catalytic domain AC613_08505 PF01475 Ferric uptake regulator family AC613_08515 PF00529 HlyD membrane-fusion protein of T1SS AC613_08515 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC613_08520 PF00873 AcrB/AcrD/AcrF family AC613_08525 PF02321 Outer membrane efflux protein AC613_08530 PF00440 Bacterial regulatory proteins, tetR family AC613_08530 PF16859 Tetracyclin repressor-like, C-terminal domain AC613_08540 PF12833 Helix-turn-helix domain AC613_08540 PF06719 AraC-type transcriptional regulator N-terminus AC613_08550 PF03466 LysR substrate binding domain AC613_08550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC613_08555 PF07690 Major Facilitator Superfamily AC613_08560 PF00248 Aldo/keto reductase family AC613_08570 PF00082 Subtilase family AC613_08570 PF01483 Proprotein convertase P-domain AC613_08580 PF07715 TonB-dependent Receptor Plug Domain AC613_08580 PF00593 TonB dependent receptor AC613_08595 PF08240 Alcohol dehydrogenase GroES-like domain AC613_08595 PF00107 Zinc-binding dehydrogenase AC613_08600 PF00654 Voltage gated chloride channel AC613_08610 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AC613_08610 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AC613_08615 PF06029 AlkA N-terminal domain AC613_08615 PF00730 HhH-GPD superfamily base excision DNA repair protein AC613_08655 PF04542 Sigma-70 region 2 AC613_08655 PF08281 Sigma-70, region 4 AC613_08660 PF03880 DbpA RNA binding domain AC613_08660 PF00271 Helicase conserved C-terminal domain AC613_08660 PF00270 DEAD/DEAH box helicase AC613_08665 PF00563 EAL domain AC613_08665 PF00990 Diguanylate cyclase, GGDEF domain AC613_08665 PF08448 PAS fold AC613_08670 PF01479 S4 domain AC613_08670 PF00849 RNA pseudouridylate synthase AC613_08675 PF00072 Response regulator receiver domain AC613_08675 PF00990 Diguanylate cyclase, GGDEF domain AC613_08695 PF03737 Aldolase/RraA AC613_08700 PF00144 Beta-lactamase AC613_08705 PF00999 Sodium/hydrogen exchanger family AC613_08710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_08710 PF00672 HAMP domain AC613_08710 PF00512 His Kinase A (phospho-acceptor) domain AC613_08715 PF00072 Response regulator receiver domain AC613_08715 PF00486 Transcriptional regulatory protein, C terminal AC613_08720 PF02321 Outer membrane efflux protein AC613_08735 PF00873 AcrB/AcrD/AcrF family AC613_08745 PF00005 ABC transporter AC613_08745 PF00664 ABC transporter transmembrane region AC613_08775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC613_08775 PF03466 LysR substrate binding domain AC613_08785 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AC613_08790 PF04070 Domain of unknown function (DUF378) AC613_08805 PF00872 Transposase, Mutator family AC613_08830 PF00085 Thioredoxin AC613_08840 PF00133 tRNA synthetases class I (I, L, M and V) AC613_08840 PF13603 Leucyl-tRNA synthetase, Domain 2 AC613_08840 PF08264 Anticodon-binding domain of tRNA AC613_08855 PF01467 Cytidylyltransferase-like AC613_08870 PF02590 Predicted SPOUT methyltransferase AC613_08885 PF04402 Protein of unknown function (DUF541) AC613_08890 PF02545 Maf-like protein AC613_08895 PF00575 S1 RNA binding domain AC613_08895 PF10150 Ribonuclease E/G family AC613_08900 PF13116 Protein of unknown function AC613_08900 PF13502 AsmA-like C-terminal region AC613_08910 PF01523 Putative modulator of DNA gyrase AC613_08915 PF04751 Protein of unknown function (DUF615) AC613_08920 PF01523 Putative modulator of DNA gyrase AC613_08930 PF14521 Lysine-specific metallo-endopeptidase AC613_08935 PF00348 Polyprenyl synthetase AC613_08940 PF02609 Exonuclease VII small subunit AC613_08945 PF11734 TilS substrate C-terminal domain AC613_08945 PF09179 TilS substrate binding domain AC613_08945 PF01171 PP-loop family AC613_08950 PF00245 Alkaline phosphatase AC613_08955 PF00375 Sodium:dicarboxylate symporter family AC613_08970 PF00877 NlpC/P60 family AC613_08975 PF00877 NlpC/P60 family AC613_08980 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AC613_08985 PF04235 Protein of unknown function (DUF418) AC613_08990 PF01266 FAD dependent oxidoreductase AC613_08995 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AC613_08995 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC613_09015 PF05649 Peptidase family M13 AC613_09015 PF01431 Peptidase family M13 AC613_09020 PF05649 Peptidase family M13 AC613_09020 PF01431 Peptidase family M13 AC613_09030 PF01609 Transposase DDE domain AC613_09030 PF05598 Transposase domain (DUF772) AC613_09040 PF00593 TonB dependent receptor AC613_09040 PF07715 TonB-dependent Receptor Plug Domain AC613_09045 PF10609 NUBPL iron-transfer P-loop NTPase AC613_09050 PF00692 dUTPase AC613_09070 PF01738 Dienelactone hydrolase family AC613_09090 PF00145 C-5 cytosine-specific DNA methylase AC613_09095 PF00872 Transposase, Mutator family AC613_09100 PF04055 Radical SAM superfamily AC613_09100 PF00919 Uncharacterized protein family UPF0004 AC613_09100 PF18693 TRAM domain AC613_09105 PF01272 Transcription elongation factor, GreA/GreB, C-term AC613_09105 PF03449 Transcription elongation factor, N-terminal AC613_09120 PF00293 NUDIX domain AC613_09125 PF05872 Bacterial protein of unknown function (DUF853) AC613_09135 PF02666 Phosphatidylserine decarboxylase AC613_09140 PF02630 SCO1/SenC AC613_09145 PF05175 Methyltransferase small domain AC613_09150 PF01264 Chorismate synthase AC613_09155 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AC613_09155 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AC613_09160 PF01118 Semialdehyde dehydrogenase, NAD binding domain AC613_09160 PF02774 Semialdehyde dehydrogenase, dimerisation domain AC613_09180 PF01416 tRNA pseudouridine synthase AC613_09185 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AC613_09190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC613_09190 PF03466 LysR substrate binding domain AC613_09195 PF00291 Pyridoxal-phosphate dependent enzyme AC613_09205 PF00290 Tryptophan synthase alpha chain AC613_09210 PF01039 Carboxyl transferase domain AC613_09210 PF17848 Acetyl-coA carboxylase zinc finger domain AC613_09215 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AC613_09215 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AC613_09215 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AC613_09215 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AC613_09235 PF00563 EAL domain AC613_09235 PF00990 Diguanylate cyclase, GGDEF domain AC613_09235 PF03707 Bacterial signalling protein N terminal repeat AC613_09250 PF00106 short chain dehydrogenase AC613_09255 PF00121 Triosephosphate isomerase AC613_09270 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AC613_09275 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AC613_09280 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AC613_09285 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AC613_09295 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AC613_09295 PF10531 SLBB domain AC613_09295 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AC613_09300 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AC613_09300 PF00384 Molybdopterin oxidoreductase AC613_09300 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal AC613_09305 PF00146 NADH dehydrogenase AC613_09310 PF12838 4Fe-4S dicluster domain AC613_09315 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AC613_09320 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AC613_09325 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AC613_09325 PF00361 Proton-conducting membrane transporter AC613_09330 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AC613_09330 PF00361 Proton-conducting membrane transporter AC613_09335 PF00361 Proton-conducting membrane transporter AC613_09345 PF17384 RimP C-terminal SH3 domain AC613_09345 PF02576 RimP N-terminal domain AC613_09350 PF00575 S1 RNA binding domain AC613_09350 PF08529 NusA N-terminal domain AC613_09350 PF13184 NusA-like KH domain AC613_09355 PF11987 Translation-initiation factor 2 AC613_09355 PF04760 Translation initiation factor IF-2, N-terminal region AC613_09355 PF08364 Bacterial translation initiation factor IF-2 associated region AC613_09355 PF00009 Elongation factor Tu GTP binding domain AC613_09360 PF02033 Ribosome-binding factor A AC613_09365 PF09157 Pseudouridine synthase II TruB, C-terminal AC613_09365 PF16198 tRNA pseudouridylate synthase B C-terminal domain AC613_09365 PF01509 TruB family pseudouridylate synthase (N terminal domain) AC613_09370 PF00312 Ribosomal protein S15 AC613_09375 PF00013 KH domain AC613_09375 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AC613_09375 PF03725 3' exoribonuclease family, domain 2 AC613_09375 PF00575 S1 RNA binding domain AC613_09375 PF01138 3' exoribonuclease family, domain 1 AC613_09385 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AC613_09385 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AC613_09395 PF00731 AIR carboxylase AC613_09400 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AC613_09400 PF02222 ATP-grasp domain AC613_09405 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AC613_09405 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AC613_09410 PF00462 Glutaredoxin AC613_09420 PF01914 MarC family integral membrane protein AC613_09425 PF00593 TonB dependent receptor AC613_09430 PF11892 Domain of unknown function (DUF3412) AC613_09430 PF03641 Possible lysine decarboxylase AC613_09430 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AC613_09435 PF00114 Pilin (bacterial filament) AC613_09435 PF07963 Prokaryotic N-terminal methylation motif AC613_09480 PF00872 Transposase, Mutator family AC613_09490 PF00872 Transposase, Mutator family AC613_09495 PF04851 Type III restriction enzyme, res subunit AC613_09495 PF02151 UvrB/uvrC motif AC613_09495 PF12344 Ultra-violet resistance protein B AC613_09495 PF17757 UvrB interaction domain AC613_09495 PF00271 Helicase conserved C-terminal domain AC613_09510 PF02534 Type IV secretory system Conjugative DNA transfer AC613_09530 PF03743 Bacterial conjugation TrbI-like protein AC613_09535 PF00437 Type II/IV secretion system protein AC613_09540 PF01464 Transglycosylase SLT domain AC613_09555 PF03135 CagE, TrbE, VirB family, component of type IV transporter system AC613_09590 PF00872 Transposase, Mutator family AC613_09600 PF00183 Hsp90 protein AC613_09600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_09610 PF01467 Cytidylyltransferase-like AC613_09620 PF00037 4Fe-4S binding domain AC613_09635 PF02927 Cellulase N-terminal ig-like domain AC613_09635 PF00759 Glycosyl hydrolase family 9 AC613_09680 PF02547 Queuosine biosynthesis protein AC613_09685 PF01702 Queuine tRNA-ribosyltransferase AC613_09690 PF02699 Preprotein translocase subunit AC613_09695 PF07549 SecD/SecF GG Motif AC613_09695 PF02355 Protein export membrane protein AC613_09695 PF13721 SecD export protein N-terminal TM region AC613_09700 PF02355 Protein export membrane protein AC613_09700 PF07549 SecD/SecF GG Motif AC613_09705 PF00872 Transposase, Mutator family AC613_09715 PF00872 Transposase, Mutator family AC613_09725 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AC613_09730 PF00294 pfkB family carbohydrate kinase AC613_09735 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AC613_09735 PF00381 PTS HPr component phosphorylation site AC613_09735 PF02896 PEP-utilising enzyme, TIM barrel domain AC613_09735 PF05524 PEP-utilising enzyme, N-terminal AC613_09735 PF00391 PEP-utilising enzyme, mobile domain AC613_09740 PF00356 Bacterial regulatory proteins, lacI family AC613_09745 PF00873 AcrB/AcrD/AcrF family AC613_09750 PF00529 HlyD membrane-fusion protein of T1SS AC613_09750 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC613_09760 PF05088 Bacterial NAD-glutamate dehydrogenase AC613_09770 PF00698 Acyl transferase domain AC613_09770 PF08240 Alcohol dehydrogenase GroES-like domain AC613_09770 PF16197 Ketoacyl-synthetase C-terminal extension AC613_09770 PF00109 Beta-ketoacyl synthase, N-terminal domain AC613_09770 PF08990 Erythronolide synthase docking AC613_09770 PF08659 KR domain AC613_09770 PF00550 Phosphopantetheine attachment site AC613_09770 PF02801 Beta-ketoacyl synthase, C-terminal domain AC613_09770 PF14765 Polyketide synthase dehydratase AC613_09775 PF00106 short chain dehydrogenase AC613_09780 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AC613_09785 PF00440 Bacterial regulatory proteins, tetR family AC613_09790 PF00106 short chain dehydrogenase AC613_09810 PF07690 Major Facilitator Superfamily AC613_09815 PF00072 Response regulator receiver domain AC613_09820 PF01627 Hpt domain AC613_09820 PF00512 His Kinase A (phospho-acceptor) domain AC613_09820 PF00672 HAMP domain AC613_09820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_09820 PF00072 Response regulator receiver domain AC613_09820 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AC613_09825 PF04286 Protein of unknown function (DUF445) AC613_09835 PF00202 Aminotransferase class-III AC613_09840 PF07690 Major Facilitator Superfamily AC613_09850 PF00384 Molybdopterin oxidoreductase AC613_09860 PF00083 Sugar (and other) transporter AC613_09860 PF07690 Major Facilitator Superfamily AC613_09865 PF01814 Hemerythrin HHE cation binding domain AC613_09870 PF00072 Response regulator receiver domain AC613_09870 PF00990 Diguanylate cyclase, GGDEF domain AC613_09875 PF01266 FAD dependent oxidoreductase AC613_09880 PF00120 Glutamine synthetase, catalytic domain AC613_09885 PF07722 Peptidase C26 AC613_09890 PF00120 Glutamine synthetase, catalytic domain AC613_09895 PF00202 Aminotransferase class-III AC613_09900 PF13416 Bacterial extracellular solute-binding protein AC613_09905 PF13533 Biotin-lipoyl like AC613_09910 PF07690 Major Facilitator Superfamily AC613_09915 PF02321 Outer membrane efflux protein AC613_09925 PF00528 Binding-protein-dependent transport system inner membrane component AC613_09930 PF00528 Binding-protein-dependent transport system inner membrane component AC613_09940 PF00171 Aldehyde dehydrogenase family AC613_09955 PF03471 Transporter associated domain AC613_09955 PF00571 CBS domain AC613_09965 PF02130 Uncharacterized protein family UPF0054 AC613_09975 PF02562 PhoH-like protein AC613_09980 PF01938 TRAM domain AC613_09980 PF00919 Uncharacterized protein family UPF0004 AC613_09980 PF04055 Radical SAM superfamily AC613_09995 PF01464 Transglycosylase SLT domain AC613_10000 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AC613_10000 PF00355 Rieske [2Fe-2S] domain AC613_10005 PF00033 Cytochrome b/b6/petB AC613_10005 PF00032 Cytochrome b(C-terminal)/b6/petD AC613_10010 PF02167 Cytochrome C1 family AC613_10015 PF02798 Glutathione S-transferase, N-terminal domain AC613_10015 PF00043 Glutathione S-transferase, C-terminal domain AC613_10020 PF04386 Stringent starvation protein B AC613_10035 PF00271 Helicase conserved C-terminal domain AC613_10035 PF00270 DEAD/DEAH box helicase AC613_10035 PF08494 DEAD/H associated AC613_10040 PF02245 Methylpurine-DNA glycosylase (MPG) AC613_10045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC613_10045 PF02743 Cache domain AC613_10045 PF00672 HAMP domain AC613_10050 PF01584 CheW-like domain AC613_10080 PF13298 DNA polymerase Ligase (LigD) AC613_10080 PF01068 ATP dependent DNA ligase domain AC613_10080 PF04679 ATP dependent DNA ligase C terminal region AC613_10085 PF00570 HRDC domain AC613_10085 PF01612 3'-5' exonuclease AC613_10090 PF03781 Sulfatase-modifying factor enzyme 1 AC613_10100 PF02601 Exonuclease VII, large subunit AC613_10100 PF13742 OB-fold nucleic acid binding domain AC613_10105 PF08331 Domain of unknown function (DUF1730) AC613_10110 PF01256 Carbohydrate kinase AC613_10110 PF03853 YjeF-related protein N-terminus AC613_10115 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AC613_10120 PF11741 AMIN domain AC613_10120 PF01520 N-acetylmuramoyl-L-alanine amidase AC613_10125 PF08676 MutL C terminal dimerisation domain AC613_10125 PF01119 DNA mismatch repair protein, C-terminal domain AC613_10140 PF07879 PHB/PHA accumulation regulator DNA-binding domain AC613_10140 PF05233 PHB accumulation regulatory domain AC613_10145 PF00106 short chain dehydrogenase AC613_10150 PF00749 tRNA synthetases class I (E and Q), catalytic domain AC613_10155 PF01435 Peptidase family M48 AC613_10160 PF01609 Transposase DDE domain AC613_10160 PF05598 Transposase domain (DUF772) AC613_10165 PF00072 Response regulator receiver domain AC613_10165 PF00990 Diguanylate cyclase, GGDEF domain AC613_10165 PF00563 EAL domain AC613_10175 PF07152 YaeQ protein AC613_10180 PF00313 'Cold-shock' DNA-binding domain AC613_10185 PF14497 Glutathione S-transferase, C-terminal domain AC613_10185 PF02798 Glutathione S-transferase, N-terminal domain AC613_10190 PF07859 alpha/beta hydrolase fold AC613_10195 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AC613_10200 PF00156 Phosphoribosyl transferase domain AC613_10205 PF00271 Helicase conserved C-terminal domain AC613_10205 PF00270 DEAD/DEAH box helicase AC613_10205 PF03880 DbpA RNA binding domain AC613_10220 PF00545 ribonuclease AC613_10225 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AC613_10225 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AC613_10230 PF00459 Inositol monophosphatase family AC613_10235 PF00588 SpoU rRNA Methylase family AC613_10245 PF00563 EAL domain AC613_10245 PF00990 Diguanylate cyclase, GGDEF domain AC613_10245 PF03707 Bacterial signalling protein N terminal repeat AC613_10245 PF13188 PAS domain AC613_10250 PF04055 Radical SAM superfamily AC613_10255 PF09285 Elongation factor P, C-terminal AC613_10255 PF08207 Elongation factor P (EF-P) KOW-like domain AC613_10255 PF01132 Elongation factor P (EF-P) OB domain AC613_10265 PF01979 Amidohydrolase family AC613_10275 PF13419 Haloacid dehalogenase-like hydrolase AC613_10285 PF01527 Transposase AC613_10290 PF13333 Integrase core domain AC613_10290 PF13276 HTH-like domain AC613_10290 PF00665 Integrase core domain AC613_10295 PF00295 Glycosyl hydrolases family 28 AC613_10310 PF00753 Metallo-beta-lactamase superfamily AC613_10320 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AC613_10325 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AC613_10335 PF01551 Peptidase family M23 AC613_10335 PF08460 Bacterial SH3 domain AC613_10340 PF01979 Amidohydrolase family AC613_10345 PF01809 Putative membrane protein insertion efficiency factor AC613_10355 PF01258 Prokaryotic dksA/traR C4-type zinc finger AC613_10365 PF02657 Fe-S metabolism associated domain AC613_10370 PF09190 DALR domain AC613_10370 PF01406 tRNA synthetases class I (C) catalytic domain AC613_10380 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AC613_10380 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AC613_10385 PF00764 Arginosuccinate synthase AC613_10400 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase AC613_10400 PF00696 Amino acid kinase family AC613_10410 PF01118 Semialdehyde dehydrogenase, NAD binding domain AC613_10415 PF00206 Lyase AC613_10425 PF00696 Amino acid kinase family AC613_10425 PF01472 PUA domain AC613_10430 PF00171 Aldehyde dehydrogenase family AC613_10440 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AC613_10440 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AC613_10450 PF00589 Phage integrase family AC613_10540 PF02322 Cytochrome bd terminal oxidase subunit II AC613_10545 PF01654 Cytochrome bd terminal oxidase subunit I AC613_10550 PF00664 ABC transporter transmembrane region AC613_10550 PF00005 ABC transporter AC613_10555 PF00005 ABC transporter AC613_10555 PF00664 ABC transporter transmembrane region AC613_10560 PF00313 'Cold-shock' DNA-binding domain AC613_10565 PF00561 alpha/beta hydrolase fold AC613_10575 PF03918 Cytochrome C biogenesis protein AC613_10580 PF08534 Redoxin AC613_10585 PF01578 Cytochrome C assembly protein AC613_10585 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AC613_10590 PF03100 CcmE AC613_10600 PF01578 Cytochrome C assembly protein AC613_10605 PF03379 CcmB protein AC613_10610 PF00005 ABC transporter AC613_10615 PF00155 Aminotransferase class I and II AC613_10620 PF00795 Carbon-nitrogen hydrolase AC613_10635 PF01479 S4 domain AC613_10635 PF00849 RNA pseudouridylate synthase AC613_10640 PF04079 Segregation and condensation complex subunit ScpB AC613_10645 PF02616 Segregation and condensation protein ScpA AC613_10650 PF03795 YCII-related domain AC613_10660 PF00356 Bacterial regulatory proteins, lacI family AC613_10680 PF00528 Binding-protein-dependent transport system inner membrane component AC613_10685 PF00528 Binding-protein-dependent transport system inner membrane component AC613_10710 PF00795 Carbon-nitrogen hydrolase AC613_10715 PF04371 Porphyromonas-type peptidyl-arginine deiminase AC613_10725 PF00444 Ribosomal protein L36 AC613_10730 PF02224 Cytidylate kinase AC613_10735 PF00575 S1 RNA binding domain AC613_10740 PF00216 Bacterial DNA-binding protein AC613_10750 PF18073 Rubredoxin metal binding domain AC613_10755 PF00953 Glycosyl transferase family 4 AC613_10760 PF02719 Polysaccharide biosynthesis protein AC613_10765 PF00483 Nucleotidyl transferase AC613_10770 PF00999 Sodium/hydrogen exchanger family AC613_10770 PF02254 TrkA-N domain AC613_10780 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AC613_10780 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AC613_10785 PF00478 IMP dehydrogenase / GMP reductase domain AC613_10785 PF00571 CBS domain AC613_10790 PF00117 Glutamine amidotransferase class-I AC613_10790 PF02540 NAD synthase AC613_10790 PF00958 GMP synthase C terminal domain AC613_10800 PF00872 Transposase, Mutator family AC613_10840 PF00196 Bacterial regulatory proteins, luxR family AC613_10840 PF00072 Response regulator receiver domain AC613_10850 PF12833 Helix-turn-helix domain AC613_10855 PF00857 Isochorismatase family AC613_10865 PF07969 Amidohydrolase family AC613_10870 PF05977 Transmembrane secretion effector AC613_10885 PF10414 Sirohaem synthase dimerisation region AC613_10885 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AC613_10885 PF14824 Sirohaem biosynthesis protein central AC613_10900 PF05974 Domain of unknown function (DUF892) AC613_10920 PF08448 PAS fold AC613_10920 PF08447 PAS fold AC613_10920 PF00563 EAL domain AC613_10920 PF00990 Diguanylate cyclase, GGDEF domain AC613_10925 PF12951 Passenger-associated-transport-repeat AC613_10930 PF00196 Bacterial regulatory proteins, luxR family AC613_10930 PF00072 Response regulator receiver domain AC613_10935 PF00072 Response regulator receiver domain AC613_10935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_10935 PF00512 His Kinase A (phospho-acceptor) domain AC613_10935 PF13426 PAS domain AC613_10935 PF08448 PAS fold AC613_10945 PF00873 AcrB/AcrD/AcrF family AC613_10950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC613_10955 PF03797 Autotransporter beta-domain AC613_10955 PF00082 Subtilase family AC613_10965 PF07694 5TMR of 5TMR-LYT AC613_10965 PF13492 GAF domain AC613_10965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_10965 PF06580 Histidine kinase AC613_10970 PF00072 Response regulator receiver domain AC613_10970 PF04397 LytTr DNA-binding domain AC613_10975 PF00144 Beta-lactamase AC613_10985 PF07995 Glucose / Sorbosone dehydrogenase AC613_10990 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AC613_11005 PF01494 FAD binding domain AC613_11010 PF13426 PAS domain AC613_11010 PF13581 Histidine kinase-like ATPase domain AC613_11010 PF07536 HWE histidine kinase AC613_11030 PF05114 Protein of unknown function (DUF692) AC613_11045 PF00881 Nitroreductase family AC613_11050 PF01965 DJ-1/PfpI family AC613_11055 PF08240 Alcohol dehydrogenase GroES-like domain AC613_11055 PF00107 Zinc-binding dehydrogenase AC613_11060 PF05598 Transposase domain (DUF772) AC613_11060 PF01609 Transposase DDE domain AC613_11105 PF00550 Phosphopantetheine attachment site AC613_11105 PF00668 Condensation domain AC613_11105 PF13193 AMP-binding enzyme C-terminal domain AC613_11105 PF00501 AMP-binding enzyme AC613_11110 PF00550 Phosphopantetheine attachment site AC613_11110 PF00668 Condensation domain AC613_11110 PF00550 Phosphopantetheine attachment site AC613_11110 PF00501 AMP-binding enzyme AC613_11110 PF13193 AMP-binding enzyme C-terminal domain AC613_11110 PF13193 AMP-binding enzyme C-terminal domain AC613_11110 PF00668 Condensation domain AC613_11110 PF00501 AMP-binding enzyme AC613_11115 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AC613_11115 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AC613_11135 PF00109 Beta-ketoacyl synthase, N-terminal domain AC613_11135 PF02801 Beta-ketoacyl synthase, C-terminal domain AC613_11140 PF00005 ABC transporter AC613_11150 PF03621 MbtH-like protein AC613_11155 PF00975 Thioesterase domain AC613_11185 PF17091 Inovirus G7P protein AC613_11230 PF02303 Helix-destabilising protein AC613_11255 PF05857 TraX protein AC613_11275 PF05857 TraX protein AC613_11300 PF02303 Helix-destabilising protein AC613_11315 PF00106 short chain dehydrogenase AC613_11320 PF00732 GMC oxidoreductase AC613_11320 PF05199 GMC oxidoreductase AC613_11370 PF01106 NifU-like domain AC613_11375 PF01329 Pterin 4 alpha carbinolamine dehydratase AC613_11385 PF02535 ZIP Zinc transporter AC613_11390 PF05598 Transposase domain (DUF772) AC613_11390 PF01609 Transposase DDE domain AC613_11395 PF11737 Protein of unknown function (DUF3300) AC613_11400 PF00849 RNA pseudouridylate synthase AC613_11400 PF01479 S4 domain AC613_11405 PF12111 Polyribonucleotide phosphorylase C terminal AC613_11405 PF10150 Ribonuclease E/G family AC613_11405 PF00575 S1 RNA binding domain AC613_11410 PF00072 Response regulator receiver domain AC613_11410 PF00196 Bacterial regulatory proteins, luxR family AC613_11425 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AC613_11435 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AC613_11435 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AC613_11435 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AC613_11460 PF00872 Transposase, Mutator family AC613_11475 PF13276 HTH-like domain AC613_11475 PF13683 Integrase core domain AC613_11485 PF10544 T5orf172 domain AC613_11520 PF13614 AAA domain AC613_11555 PF00436 Single-strand binding protein family AC613_11560 PF01131 DNA topoisomerase AC613_11560 PF01751 Toprim domain AC613_11580 PF00202 Aminotransferase class-III AC613_11595 PF13406 Transglycosylase SLT domain AC613_11605 PF01609 Transposase DDE domain AC613_11605 PF05598 Transposase domain (DUF772) AC613_11610 PF00872 Transposase, Mutator family AC613_11805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC613_11805 PF03466 LysR substrate binding domain AC613_11810 PF07690 Major Facilitator Superfamily AC613_11830 PF01527 Transposase AC613_11915 PF04717 Type VI secretion system, phage-baseplate injector AC613_11915 PF16671 Actin cross-linking domain AC613_11925 PF07724 AAA domain (Cdc48 subfamily) AC613_11925 PF00004 ATPase family associated with various cellular activities (AAA) AC613_11925 PF17871 AAA lid domain AC613_11925 PF10431 C-terminal, D2-small domain, of ClpB protein AC613_11980 PF04717 Type VI secretion system, phage-baseplate injector AC613_11980 PF16671 Actin cross-linking domain AC613_12030 PF04717 Type VI secretion system, phage-baseplate injector AC613_12040 PF00691 OmpA family AC613_12040 PF04972 BON domain AC613_12085 PF00589 Phage integrase family AC613_12085 PF13356 Arm DNA-binding domain AC613_12095 PF01066 CDP-alcohol phosphatidyltransferase AC613_12100 PF02151 UvrB/uvrC motif AC613_12100 PF08459 UvrC Helix-hairpin-helix N-terminal AC613_12100 PF01541 GIY-YIG catalytic domain AC613_12110 PF01451 Low molecular weight phosphotyrosine protein phosphatase AC613_12115 PF02348 Cytidylyltransferase AC613_12120 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AC613_12125 PF00005 ABC transporter AC613_12125 PF00664 ABC transporter transmembrane region AC613_12130 PF02472 Biopolymer transport protein ExbD/TolR AC613_12135 PF01618 MotA/TolQ/ExbB proton channel family AC613_12140 PF03772 Competence protein AC613_12140 PF00753 Metallo-beta-lactamase superfamily AC613_12150 PF00005 ABC transporter AC613_12155 PF12704 MacB-like periplasmic core domain AC613_12155 PF02687 FtsX-like permease family AC613_12165 PF03937 Flavinator of succinate dehydrogenase AC613_12170 PF13085 2Fe-2S iron-sulfur cluster binding domain AC613_12180 PF00890 FAD binding domain AC613_12180 PF02910 Fumarate reductase flavoprotein C-term AC613_12185 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AC613_12190 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AC613_12195 PF01571 Aminomethyltransferase folate-binding domain AC613_12200 PF17912 MalK OB fold domain AC613_12200 PF00005 ABC transporter AC613_12205 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AC613_12205 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AC613_12210 PF02685 Glucokinase AC613_12215 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AC613_12220 PF00920 Dehydratase family AC613_12225 PF01081 KDPG and KHG aldolase AC613_12230 PF00873 AcrB/AcrD/AcrF family AC613_12235 PF00873 AcrB/AcrD/AcrF family AC613_12240 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC613_12250 PF00034 Cytochrome c AC613_12295 PF00512 His Kinase A (phospho-acceptor) domain AC613_12295 PF00072 Response regulator receiver domain AC613_12295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_12295 PF09308 LuxQ, periplasmic AC613_12300 PF17674 HHH domain AC613_12300 PF00575 S1 RNA binding domain AC613_12300 PF09371 Tex-like protein N-terminal domain AC613_12300 PF16921 Tex protein YqgF-like domain AC613_12310 PF01266 FAD dependent oxidoreductase AC613_12310 PF00355 Rieske [2Fe-2S] domain AC613_12325 PF00561 alpha/beta hydrolase fold AC613_12335 PF01066 CDP-alcohol phosphatidyltransferase AC613_12355 PF03618 Kinase/pyrophosphorylase AC613_12360 PF02896 PEP-utilising enzyme, TIM barrel domain AC613_12360 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AC613_12360 PF00391 PEP-utilising enzyme, mobile domain AC613_12365 PF00924 Mechanosensitive ion channel AC613_12365 PF05552 Conserved TM helix AC613_12370 PF00929 Exonuclease AC613_12375 PF14437 MafB19-like deaminase AC613_12380 PF02742 Iron dependent repressor, metal binding and dimerisation domain AC613_12380 PF01325 Iron dependent repressor, N-terminal DNA binding domain AC613_12385 PF01566 Natural resistance-associated macrophage protein AC613_12390 PF00561 alpha/beta hydrolase fold AC613_12415 PF12804 MobA-like NTP transferase domain AC613_12420 PF03453 MoeA N-terminal region (domain I and II) AC613_12420 PF03454 MoeA C-terminal region (domain IV) AC613_12420 PF00994 Probable molybdopterin binding domain AC613_12430 PF03372 Endonuclease/Exonuclease/phosphatase family AC613_12440 PF00107 Zinc-binding dehydrogenase AC613_12440 PF08240 Alcohol dehydrogenase GroES-like domain AC613_12440 PF13823 Alcohol dehydrogenase GroES-associated AC613_12465 PF00899 ThiF family AC613_12470 PF03453 MoeA N-terminal region (domain I and II) AC613_12470 PF00994 Probable molybdopterin binding domain AC613_12470 PF03454 MoeA C-terminal region (domain IV) AC613_12475 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AC613_12475 PF01926 50S ribosome-binding GTPase AC613_12480 PF13360 PQQ-like domain AC613_12480 PF01011 PQQ enzyme repeat AC613_12490 PF13464 Domain of unknown function (DUF4115) AC613_12500 PF04055 Radical SAM superfamily AC613_12505 PF00334 Nucleoside diphosphate kinase AC613_12515 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AC613_12515 PF00378 Enoyl-CoA hydratase/isomerase AC613_12515 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AC613_12520 PF00108 Thiolase, N-terminal domain AC613_12520 PF02803 Thiolase, C-terminal domain AC613_12525 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AC613_12530 PF00004 ATPase family associated with various cellular activities (AAA) AC613_12530 PF16193 AAA C-terminal domain AC613_12530 PF12002 MgsA AAA+ ATPase C terminal AC613_12540 PF03548 Outer membrane lipoprotein carrier protein LolA AC613_12550 PF17854 FtsK alpha domain AC613_12550 PF01580 FtsK/SpoIIIE family AC613_12550 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AC613_12550 PF09397 Ftsk gamma domain AC613_12555 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC613_12565 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AC613_12570 PF01176 Translation initiation factor 1A / IF-1 AC613_12575 PF02861 Clp amino terminal domain, pathogenicity island component AC613_12575 PF07724 AAA domain (Cdc48 subfamily) AC613_12575 PF00004 ATPase family associated with various cellular activities (AAA) AC613_12575 PF10431 C-terminal, D2-small domain, of ClpB protein AC613_12575 PF17871 AAA lid domain AC613_12580 PF02617 ATP-dependent Clp protease adaptor protein ClpS AC613_12585 PF00293 NUDIX domain AC613_12595 PF04356 Protein of unknown function (DUF489) AC613_12600 PF12729 Four helix bundle sensory module for signal transduction AC613_12600 PF00672 HAMP domain AC613_12600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC613_12610 PF03707 Bacterial signalling protein N terminal repeat AC613_12610 PF00990 Diguanylate cyclase, GGDEF domain AC613_12610 PF00563 EAL domain AC613_12615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_12615 PF07730 Histidine kinase AC613_12620 PF00990 Diguanylate cyclase, GGDEF domain AC613_12620 PF00563 EAL domain AC613_12620 PF03707 Bacterial signalling protein N terminal repeat AC613_12625 PF13426 PAS domain AC613_12625 PF13188 PAS domain AC613_12625 PF00989 PAS fold AC613_12625 PF00512 His Kinase A (phospho-acceptor) domain AC613_12625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_12645 PF01584 CheW-like domain AC613_12645 PF00072 Response regulator receiver domain AC613_12655 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AC613_12655 PF00460 Flagella basal body rod protein AC613_12660 PF03963 Flagellar hook capping protein - N-terminal region AC613_12665 PF00460 Flagella basal body rod protein AC613_12665 PF07559 Flagellar basal body protein FlaE AC613_12665 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AC613_12670 PF00460 Flagella basal body rod protein AC613_12670 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AC613_12675 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AC613_12675 PF00460 Flagella basal body rod protein AC613_12680 PF02107 Flagellar L-ring protein AC613_12685 PF02119 Flagellar P-ring protein AC613_12690 PF10135 Rod binding protein AC613_12690 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AC613_12695 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AC613_12695 PF07196 Flagellin hook IN motif AC613_12700 PF00700 Bacterial flagellin C-terminal helical region AC613_12700 PF00669 Bacterial flagellin N-terminal helical region AC613_12705 PF01609 Transposase DDE domain AC613_12705 PF05598 Transposase domain (DUF772) AC613_12710 PF00700 Bacterial flagellin C-terminal helical region AC613_12710 PF00669 Bacterial flagellin N-terminal helical region AC613_12715 PF07195 Flagellar hook-associated protein 2 C-terminus AC613_12715 PF02465 Flagellar hook-associated protein 2 N-terminus AC613_12715 PF07196 Flagellin hook IN motif AC613_12720 PF02561 Flagellar protein FliS AC613_12735 PF00196 Bacterial regulatory proteins, luxR family AC613_12735 PF00072 Response regulator receiver domain AC613_12740 PF04552 Sigma-54, DNA binding domain AC613_12740 PF00309 Sigma-54 factor, Activator interacting domain (AID) AC613_12740 PF04963 Sigma-54 factor, core binding domain AC613_12745 PF00072 Response regulator receiver domain AC613_12745 PF01339 CheB methylesterase AC613_12750 PF00158 Sigma-54 interaction domain AC613_12750 PF02954 Bacterial regulatory protein, Fis family AC613_12750 PF00072 Response regulator receiver domain AC613_12755 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AC613_12765 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AC613_12765 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AC613_12805 PF01609 Transposase DDE domain AC613_12805 PF05598 Transposase domain (DUF772) AC613_12815 PF00589 Phage integrase family AC613_12825 PF08212 Lipocalin-like domain AC613_12835 PF12806 Acetyl-CoA dehydrogenase C-terminal like AC613_12835 PF02770 Acyl-CoA dehydrogenase, middle domain AC613_12835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC613_12835 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC613_12845 PF02780 Transketolase, C-terminal domain AC613_12845 PF02779 Transketolase, pyrimidine binding domain AC613_12845 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AC613_12865 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family AC613_12870 PF00753 Metallo-beta-lactamase superfamily AC613_12870 PF16123 Hydroxyacylglutathione hydrolase C-terminus AC613_12875 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AC613_12875 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AC613_12890 PF03808 Glycosyl transferase WecB/TagA/CpsF family AC613_12905 PF14667 Polysaccharide biosynthesis C-terminal domain AC613_12915 PF00534 Glycosyl transferases group 1 AC613_12915 PF13439 Glycosyltransferase Family 4 AC613_12935 PF02397 Bacterial sugar transferase AC613_12955 PF13411 MerR HTH family regulatory protein AC613_12960 PF00216 Bacterial DNA-binding protein AC613_12965 PF03483 B3/4 domain AC613_12965 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AC613_12965 PF03484 tRNA synthetase B5 domain AC613_12965 PF03147 Ferredoxin-fold anticodon binding domain AC613_12965 PF01588 Putative tRNA binding domain AC613_12970 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AC613_12970 PF01409 tRNA synthetases class II core domain (F) AC613_12975 PF00453 Ribosomal protein L20 AC613_12980 PF01632 Ribosomal protein L35 AC613_12985 PF05198 Translation initiation factor IF-3, N-terminal domain AC613_12985 PF00707 Translation initiation factor IF-3, C-terminal domain AC613_12990 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AC613_12990 PF02824 TGS domain AC613_12990 PF03129 Anticodon binding domain AC613_12990 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AC613_12995 PF00356 Bacterial regulatory proteins, lacI family AC613_13000 PF00686 Starch binding domain AC613_13000 PF00128 Alpha amylase, catalytic domain AC613_13005 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AC613_13035 PF05598 Transposase domain (DUF772) AC613_13035 PF01609 Transposase DDE domain AC613_13040 PF05598 Transposase domain (DUF772) AC613_13040 PF01609 Transposase DDE domain AC613_13060 PF00128 Alpha amylase, catalytic domain AC613_13075 PF01609 Transposase DDE domain AC613_13075 PF05598 Transposase domain (DUF772) AC613_13115 PF04616 Glycosyl hydrolases family 43 AC613_13120 PF07532 Bacterial Ig-like domain (group 4) AC613_13125 PF07715 TonB-dependent Receptor Plug Domain AC613_13125 PF00593 TonB dependent receptor AC613_13135 PF00082 Subtilase family AC613_13135 PF09286 Pro-kumamolisin, activation domain AC613_13160 PF13520 Amino acid permease AC613_13175 PF01321 Creatinase/Prolidase N-terminal domain AC613_13175 PF00557 Metallopeptidase family M24 AC613_13180 PF00171 Aldehyde dehydrogenase family AC613_13185 PF00701 Dihydrodipicolinate synthetase family AC613_13190 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC613_13190 PF04324 BFD-like [2Fe-2S] binding domain AC613_13200 PF01266 FAD dependent oxidoreductase AC613_13205 PF05544 Proline racemase AC613_13215 PF00448 SRP54-type protein, GTPase domain AC613_13215 PF02881 SRP54-type protein, helical bundle domain AC613_13220 PF00633 Helix-hairpin-helix motif AC613_13220 PF14815 NUDIX domain AC613_13220 PF00730 HhH-GPD superfamily base excision DNA repair protein AC613_13220 PF10576 Iron-sulfur binding domain of endonuclease III AC613_13225 PF04362 Bacterial Fe(2+) trafficking AC613_13230 PF00072 Response regulator receiver domain AC613_13230 PF13426 PAS domain AC613_13230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_13265 PF05598 Transposase domain (DUF772) AC613_13265 PF01609 Transposase DDE domain AC613_13280 PF01609 Transposase DDE domain AC613_13280 PF05598 Transposase domain (DUF772) AC613_13295 PF00535 Glycosyl transferase family 2 AC613_13295 PF00534 Glycosyl transferases group 1 AC613_13300 PF02049 Flagellar hook-basal body complex protein FliE AC613_13305 PF08345 Flagellar M-ring protein C-terminal AC613_13305 PF01514 Secretory protein of YscJ/FliF family AC613_13310 PF14842 FliG N-terminal domain AC613_13310 PF01706 FliG C-terminal domain AC613_13310 PF14841 FliG middle domain AC613_13320 PF18269 T3SS EscN ATPase C-terminal domain AC613_13320 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AC613_13340 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AC613_13340 PF02154 Flagellar motor switch protein FliM AC613_13345 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AC613_13350 PF04347 Flagellar biosynthesis protein, FliO AC613_13355 PF00813 FliP family AC613_13360 PF01313 Bacterial export proteins, family 3 AC613_13365 PF01311 Bacterial export proteins, family 1 AC613_13380 PF00563 EAL domain AC613_13380 PF00990 Diguanylate cyclase, GGDEF domain AC613_13380 PF13188 PAS domain AC613_13380 PF03707 Bacterial signalling protein N terminal repeat AC613_13390 PF01312 FlhB HrpN YscU SpaS Family AC613_13395 PF00771 FHIPEP family AC613_13400 PF00448 SRP54-type protein, GTPase domain AC613_13405 PF10609 NUBPL iron-transfer P-loop NTPase AC613_13410 PF04542 Sigma-70 region 2 AC613_13410 PF04539 Sigma-70 region 3 AC613_13410 PF04545 Sigma-70, region 4 AC613_13415 PF00072 Response regulator receiver domain AC613_13420 PF04344 Chemotaxis phosphatase, CheZ AC613_13425 PF01627 Hpt domain AC613_13425 PF07194 P2 response regulator binding domain AC613_13425 PF01584 CheW-like domain AC613_13425 PF02895 Signal transducing histidine kinase, homodimeric domain AC613_13425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_13455 PF01609 Transposase DDE domain AC613_13455 PF05598 Transposase domain (DUF772) AC613_13480 PF00872 Transposase, Mutator family AC613_13495 PF01618 MotA/TolQ/ExbB proton channel family AC613_13500 PF13677 Membrane MotB of proton-channel complex MotA/MotB AC613_13500 PF00691 OmpA family AC613_13505 PF13614 AAA domain AC613_13510 PF01584 CheW-like domain AC613_13520 PF00072 Response regulator receiver domain AC613_13525 PF01584 CheW-like domain AC613_13525 PF09078 CheY binding AC613_13525 PF01627 Hpt domain AC613_13525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_13525 PF02895 Signal transducing histidine kinase, homodimeric domain AC613_13530 PF02203 Tar ligand binding domain homologue AC613_13530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC613_13530 PF00672 HAMP domain AC613_13540 PF00672 HAMP domain AC613_13540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC613_13540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC613_13540 PF00672 HAMP domain AC613_13540 PF17200 Single Cache domain 2 AC613_13540 PF17200 Single Cache domain 2 AC613_13545 PF02203 Tar ligand binding domain homologue AC613_13545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC613_13545 PF00672 HAMP domain AC613_13550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC613_13550 PF00672 HAMP domain AC613_13555 PF00672 HAMP domain AC613_13555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC613_13555 PF02203 Tar ligand binding domain homologue AC613_13565 PF00672 HAMP domain AC613_13565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC613_13565 PF02203 Tar ligand binding domain homologue AC613_13575 PF02203 Tar ligand binding domain homologue AC613_13575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC613_13575 PF00672 HAMP domain AC613_13580 PF02203 Tar ligand binding domain homologue AC613_13580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC613_13580 PF00672 HAMP domain AC613_13585 PF00672 HAMP domain AC613_13585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC613_13585 PF02203 Tar ligand binding domain homologue AC613_13590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC613_13590 PF02203 Tar ligand binding domain homologue AC613_13590 PF00672 HAMP domain AC613_13600 PF07317 Flagellar regulator YcgR AC613_13600 PF07238 PilZ domain AC613_13605 PF01584 CheW-like domain AC613_13615 PF02203 Tar ligand binding domain homologue AC613_13615 PF00672 HAMP domain AC613_13615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC613_13620 PF01739 CheR methyltransferase, SAM binding domain AC613_13620 PF03705 CheR methyltransferase, all-alpha domain AC613_13625 PF03975 CheD chemotactic sensory transduction AC613_13630 PF01339 CheB methylesterase AC613_13630 PF00072 Response regulator receiver domain AC613_13635 PF03707 Bacterial signalling protein N terminal repeat AC613_13635 PF00990 Diguanylate cyclase, GGDEF domain AC613_13635 PF00563 EAL domain AC613_13640 PF00561 alpha/beta hydrolase fold AC613_13645 PF00330 Aconitase family (aconitate hydratase) AC613_13645 PF11791 Aconitate B N-terminal domain AC613_13645 PF06434 Aconitate hydratase 2 N-terminus AC613_13660 PF00330 Aconitase family (aconitate hydratase) AC613_13660 PF00694 Aconitase C-terminal domain AC613_13675 PF13193 AMP-binding enzyme C-terminal domain AC613_13675 PF00501 AMP-binding enzyme AC613_13680 PF00378 Enoyl-CoA hydratase/isomerase AC613_13685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_13685 PF01627 Hpt domain AC613_13685 PF00072 Response regulator receiver domain AC613_13685 PF00512 His Kinase A (phospho-acceptor) domain AC613_13690 PF00512 His Kinase A (phospho-acceptor) domain AC613_13690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_13690 PF01627 Hpt domain AC613_13690 PF00072 Response regulator receiver domain AC613_13695 PF00072 Response regulator receiver domain AC613_13700 PF01336 OB-fold nucleic acid binding domain AC613_13700 PF00152 tRNA synthetases class II (D, K and N) AC613_13705 PF00472 RF-1 domain AC613_13705 PF03462 PCRF domain AC613_13710 PF00072 Response regulator receiver domain AC613_13710 PF04397 LytTr DNA-binding domain AC613_13720 PF17768 RecJ OB domain AC613_13720 PF02272 DHHA1 domain AC613_13720 PF01368 DHH family AC613_13730 PF01272 Transcription elongation factor, GreA/GreB, C-term AC613_13730 PF03449 Transcription elongation factor, N-terminal AC613_13735 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AC613_13735 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AC613_13735 PF02142 MGS-like domain AC613_13745 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AC613_13745 PF00117 Glutamine amidotransferase class-I AC613_13750 PF01113 Dihydrodipicolinate reductase, N-terminus AC613_13750 PF05173 Dihydrodipicolinate reductase, C-terminus AC613_13755 PF03473 MOSC domain AC613_13755 PF03475 3-alpha domain AC613_13760 PF00155 Aminotransferase class I and II AC613_13775 PF07670 Nucleoside recognition AC613_13775 PF07664 Ferrous iron transport protein B C terminus AC613_13775 PF02421 Ferrous iron transport protein B AC613_13785 PF00378 Enoyl-CoA hydratase/isomerase AC613_13795 PF00682 HMGL-like AC613_13800 PF00106 short chain dehydrogenase AC613_13805 PF01132 Elongation factor P (EF-P) OB domain AC613_13805 PF08207 Elongation factor P (EF-P) KOW-like domain AC613_13805 PF09285 Elongation factor P, C-terminal AC613_13825 PF02913 FAD linked oxidases, C-terminal domain AC613_13825 PF01565 FAD binding domain AC613_13830 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AC613_13830 PF01842 ACT domain AC613_13830 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AC613_13840 PF13520 Amino acid permease AC613_13845 PF13520 Amino acid permease AC613_13850 PF00596 Class II Aldolase and Adducin N-terminal domain AC613_13855 PF03079 ARD/ARD' family AC613_13875 PF01502 Phosphoribosyl-AMP cyclohydrolase AC613_13875 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AC613_13880 PF00977 Histidine biosynthesis protein AC613_13885 PF00977 Histidine biosynthesis protein AC613_13890 PF00117 Glutamine amidotransferase class-I AC613_13895 PF00475 Imidazoleglycerol-phosphate dehydratase AC613_13900 PF00155 Aminotransferase class I and II AC613_13905 PF00815 Histidinol dehydrogenase AC613_13910 PF01634 ATP phosphoribosyltransferase AC613_13910 PF08029 HisG, C-terminal domain AC613_13920 PF13393 Histidyl-tRNA synthetase AC613_13920 PF03129 Anticodon binding domain AC613_13925 PF00027 Cyclic nucleotide-binding domain AC613_13925 PF13545 Crp-like helix-turn-helix domain AC613_13935 PF00291 Pyridoxal-phosphate dependent enzyme AC613_13935 PF14821 Threonine synthase N terminus AC613_13945 PF08544 GHMP kinases C terminal AC613_13945 PF00288 GHMP kinases N terminal domain AC613_13950 PF00696 Amino acid kinase family AC613_13950 PF01842 ACT domain AC613_13950 PF03447 Homoserine dehydrogenase, NAD binding domain AC613_13950 PF13840 ACT domain AC613_13950 PF00742 Homoserine dehydrogenase AC613_13955 PF03073 TspO/MBR family AC613_13960 PF01527 Transposase AC613_13965 PF00872 Transposase, Mutator family AC613_13975 PF01609 Transposase DDE domain AC613_13975 PF05598 Transposase domain (DUF772) AC613_13990 PF00872 Transposase, Mutator family AC613_14020 PF00872 Transposase, Mutator family AC613_14035 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AC613_14035 PF17287 POTRA domain AC613_14035 PF08479 POTRA domain, ShlB-type AC613_14045 PF01522 Polysaccharide deacetylase AC613_14045 PF14883 Hypothetical glycosyl hydrolase family 13 AC613_14050 PF00535 Glycosyl transferase family 2 AC613_14065 PF00171 Aldehyde dehydrogenase family AC613_14080 PF01180 Dihydroorotate dehydrogenase AC613_14085 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AC613_14085 PF01565 FAD binding domain AC613_14090 PF00892 EamA-like transporter family AC613_14095 PF01177 Asp/Glu/Hydantoin racemase AC613_14110 PF04551 GcpE protein AC613_14120 PF00072 Response regulator receiver domain AC613_14130 PF00150 Cellulase (glycosyl hydrolase family 5) AC613_14130 PF02013 Cellulose or protein binding domain AC613_14135 PF00360 Phytochrome region AC613_14135 PF00990 Diguanylate cyclase, GGDEF domain AC613_14135 PF01590 GAF domain AC613_14135 PF00563 EAL domain AC613_14140 PF00474 Sodium:solute symporter family AC613_14145 PF00933 Glycosyl hydrolase family 3 N terminal domain AC613_14145 PF14310 Fibronectin type III-like domain AC613_14145 PF01915 Glycosyl hydrolase family 3 C-terminal domain AC613_14165 PF00342 Phosphoglucose isomerase AC613_14170 PF02261 Aspartate decarboxylase AC613_14175 PF02569 Pantoate-beta-alanine ligase AC613_14180 PF02548 Ketopantoate hydroxymethyltransferase AC613_14185 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AC613_14190 PF01743 Poly A polymerase head domain AC613_14190 PF12626 Polymerase A arginine-rich C-terminus AC613_14190 PF12627 Probable RNA and SrmB- binding site of polymerase A AC613_14200 PF02649 Type I GTP cyclohydrolase folE2 AC613_14205 PF01520 N-acetylmuramoyl-L-alanine amidase AC613_14215 PF05598 Transposase domain (DUF772) AC613_14215 PF01609 Transposase DDE domain AC613_14250 PF00872 Transposase, Mutator family AC613_14260 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AC613_14260 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AC613_14270 PF17137 Domain of unknown function (DUF5110) AC613_14270 PF01055 Glycosyl hydrolases family 31 AC613_14270 PF16338 Domain of unknown function (DUF4968) AC613_14275 PF08532 Beta-galactosidase trimerisation domain AC613_14275 PF02449 Beta-galactosidase AC613_14275 PF08533 Beta-galactosidase C-terminal domain AC613_14285 PF00942 Cellulose binding domain AC613_14285 PF03442 Carbohydrate binding domain X2 AC613_14300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC613_14300 PF03466 LysR substrate binding domain AC613_14310 PF01081 KDPG and KHG aldolase AC613_14315 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AC613_14315 PF13378 Enolase C-terminal domain-like AC613_14320 PF08450 SMP-30/Gluconolactonase/LRE-like region AC613_14325 PF05035 2-keto-3-deoxy-galactonokinase AC613_14330 PF00037 4Fe-4S binding domain AC613_14330 PF11953 Domain of unknown function (DUF3470) AC613_14340 PF00701 Dihydrodipicolinate synthetase family AC613_14355 PF00578 AhpC/TSA family AC613_14360 PF13638 PIN domain AC613_14360 PF02562 PhoH-like protein AC613_14375 PF08543 Phosphomethylpyrimidine kinase AC613_14400 PF03466 LysR substrate binding domain AC613_14400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC613_14410 PF02678 Pirin AC613_14410 PF17954 Quercetinase C-terminal cupin domain AC613_14415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC613_14415 PF08447 PAS fold AC613_14415 PF13426 PAS domain AC613_14425 PF02599 Global regulator protein family AC613_14430 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AC613_14430 PF02272 DHHA1 domain AC613_14430 PF01411 tRNA synthetases class II (A) AC613_14435 PF02631 RecX family AC613_14445 PF00154 recA bacterial DNA recombination protein AC613_14450 PF00717 Peptidase S24-like AC613_14450 PF01726 LexA DNA binding domain AC613_14455 PF03109 ABC1 family AC613_14460 PF02464 Competence-damaged protein AC613_14465 PF13167 GTP-binding GTPase N-terminal AC613_14465 PF01926 50S ribosome-binding GTPase AC613_14465 PF16360 GTP-binding GTPase Middle Region AC613_14470 PF17209 Hfq protein AC613_14480 PF00809 Pterin binding enzyme AC613_14485 PF01434 Peptidase family M41 AC613_14485 PF06480 FtsH Extracellular AC613_14485 PF00004 ATPase family associated with various cellular activities (AAA) AC613_14485 PF17862 AAA+ lid domain AC613_14490 PF01728 FtsJ-like methyltransferase AC613_14495 PF01985 CRS1 / YhbY (CRM) domain AC613_14500 PF04430 Protein of unknown function (DUF498/DUF598) AC613_14505 PF01476 LysM domain AC613_14505 PF01551 Peptidase family M23 AC613_14510 PF09335 SNARE associated Golgi protein AC613_14520 PF01975 Survival protein SurE AC613_14525 PF01713 Smr domain AC613_14530 PF01142 tRNA pseudouridine synthase D (TruD) AC613_14535 PF02542 YgbB family AC613_14540 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AC613_14545 PF04977 Septum formation initiator AC613_14550 PF00113 Enolase, C-terminal TIM barrel domain AC613_14550 PF03952 Enolase, N-terminal domain AC613_14560 PF00793 DAHP synthetase I family AC613_14565 PF00117 Glutamine amidotransferase class-I AC613_14565 PF06418 CTP synthase N-terminus AC613_14575 PF01751 Toprim domain AC613_14575 PF00204 DNA gyrase B AC613_14575 PF00986 DNA gyrase B subunit, carboxyl terminus AC613_14575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_14590 PF01384 Phosphate transporter family AC613_14600 PF01595 Cyclin M transmembrane N-terminal domain AC613_14600 PF00571 CBS domain AC613_14600 PF03471 Transporter associated domain AC613_14630 PF00005 ABC transporter AC613_14630 PF00664 ABC transporter transmembrane region AC613_14635 PF00005 ABC transporter AC613_14670 PF08241 Methyltransferase domain AC613_14685 PF00535 Glycosyl transferase family 2 AC613_14690 PF01943 Polysaccharide biosynthesis protein AC613_14695 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AC613_14715 PF05523 WxcM-like, C-terminal AC613_14730 PF00034 Cytochrome c AC613_14740 PF08281 Sigma-70, region 4 AC613_14740 PF04542 Sigma-70 region 2 AC613_14750 PF00082 Subtilase family AC613_14755 PF01578 Cytochrome C assembly protein AC613_14760 PF04995 Heme exporter protein D (CcmD) AC613_14765 PF03100 CcmE AC613_14770 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AC613_14770 PF01578 Cytochrome C assembly protein AC613_14775 PF08534 Redoxin AC613_14780 PF03918 Cytochrome C biogenesis protein AC613_14790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_14790 PF00072 Response regulator receiver domain AC613_14790 PF13426 PAS domain AC613_14795 PF06745 KaiC AC613_14800 PF00672 HAMP domain AC613_14800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_14800 PF00512 His Kinase A (phospho-acceptor) domain AC613_14800 PF01627 Hpt domain AC613_14800 PF00072 Response regulator receiver domain AC613_14800 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AC613_14805 PF00072 Response regulator receiver domain AC613_14805 PF13188 PAS domain AC613_14805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_14805 PF08448 PAS fold AC613_14805 PF00512 His Kinase A (phospho-acceptor) domain AC613_14830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC613_14830 PF00672 HAMP domain AC613_14830 PF02203 Tar ligand binding domain homologue AC613_14845 PF00872 Transposase, Mutator family AC613_14865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC613_14865 PF03466 LysR substrate binding domain AC613_14870 PF02525 Flavodoxin-like fold AC613_14875 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AC613_14875 PF02403 Seryl-tRNA synthetase N-terminal domain AC613_14880 PF03544 Gram-negative bacterial TonB protein C-terminal AC613_14890 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AC613_14895 PF01817 Chorismate mutase type II AC613_14895 PF00800 Prephenate dehydratase AC613_14895 PF01842 ACT domain AC613_14900 PF00266 Aminotransferase class-V AC613_14905 PF00174 Oxidoreductase molybdopterin binding domain AC613_14910 PF01794 Ferric reductase like transmembrane component AC613_14935 PF00392 Bacterial regulatory proteins, gntR family AC613_14935 PF07702 UTRA domain AC613_14950 PF07969 Amidohydrolase family AC613_14955 PF00221 Aromatic amino acid lyase AC613_14965 PF17391 Urocanase N-terminal domain AC613_14965 PF17392 Urocanase C-terminal domain AC613_14965 PF01175 Urocanase Rossmann-like domain AC613_14975 PF13360 PQQ-like domain AC613_14980 PF03989 DNA gyrase C-terminal domain, beta-propeller AC613_14980 PF00521 DNA gyrase/topoisomerase IV, subunit A AC613_14985 PF01008 Initiation factor 2 subunit family AC613_14995 PF00152 tRNA synthetases class II (D, K and N) AC613_15000 PF00533 BRCA1 C Terminus (BRCT) domain AC613_15000 PF03120 NAD-dependent DNA ligase OB-fold domain AC613_15000 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AC613_15000 PF12826 Helix-hairpin-helix motif AC613_15000 PF01653 NAD-dependent DNA ligase adenylation domain AC613_15005 PF00155 Aminotransferase class I and II AC613_15015 PF04354 ZipA, C-terminal FtsZ-binding domain AC613_15020 PF02463 RecF/RecN/SMC N terminal domain AC613_15030 PF03948 Ribosomal protein L9, C-terminal domain AC613_15030 PF01281 Ribosomal protein L9, N-terminal domain AC613_15035 PF01084 Ribosomal protein S18 AC613_15040 PF01250 Ribosomal protein S6 AC613_15045 PF01521 Iron-sulphur cluster biosynthesis AC613_15050 PF00152 tRNA synthetases class II (D, K and N) AC613_15050 PF01336 OB-fold nucleic acid binding domain AC613_15085 PF01609 Transposase DDE domain AC613_15085 PF05598 Transposase domain (DUF772) AC613_15090 PF00072 Response regulator receiver domain AC613_15090 PF00196 Bacterial regulatory proteins, luxR family AC613_15135 PF00484 Carbonic anhydrase AC613_15140 PF06052 3-hydroxyanthranilic acid dioxygenase AC613_15150 PF00266 Aminotransferase class-V AC613_15155 PF01494 FAD binding domain AC613_15160 PF00929 Exonuclease AC613_15160 PF08411 Exonuclease C-terminal AC613_15180 PF01513 ATP-NAD kinase AC613_15185 PF02926 THUMP domain AC613_15185 PF01170 Putative RNA methylase family UPF0020 AC613_15185 PF10672 S-adenosylmethionine-dependent methyltransferase AC613_15220 PF00581 Rhodanese-like domain AC613_15225 PF00293 NUDIX domain AC613_15230 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AC613_15230 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AC613_15235 PF00378 Enoyl-CoA hydratase/isomerase AC613_15245 PF00730 HhH-GPD superfamily base excision DNA repair protein AC613_15245 PF00633 Helix-hairpin-helix motif AC613_15245 PF10576 Iron-sulfur binding domain of endonuclease III AC613_15250 PF00916 Sulfate permease family AC613_15250 PF01740 STAS domain AC613_15255 PF00484 Carbonic anhydrase AC613_15270 PF12849 PBP superfamily domain AC613_15275 PF12849 PBP superfamily domain AC613_15280 PF00528 Binding-protein-dependent transport system inner membrane component AC613_15285 PF00528 Binding-protein-dependent transport system inner membrane component AC613_15290 PF00005 ABC transporter AC613_15295 PF01895 PhoU domain AC613_15305 PF00929 Exonuclease AC613_15315 PF00588 SpoU rRNA Methylase family AC613_15315 PF08032 RNA 2'-O ribose methyltransferase substrate binding AC613_15325 PF17876 Cold shock domain AC613_15325 PF00575 S1 RNA binding domain AC613_15325 PF00773 RNB domain AC613_15325 PF08206 Ribonuclease B OB domain AC613_15325 PF08461 Ribonuclease R winged-helix domain AC613_15340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC613_15340 PF02770 Acyl-CoA dehydrogenase, middle domain AC613_15340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC613_15345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC613_15345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC613_15345 PF02770 Acyl-CoA dehydrogenase, middle domain AC613_15350 PF01209 ubiE/COQ5 methyltransferase family AC613_15355 PF00809 Pterin binding enzyme AC613_15355 PF02574 Homocysteine S-methyltransferase AC613_15360 PF02310 B12 binding domain AC613_15360 PF02574 Homocysteine S-methyltransferase AC613_15360 PF02607 B12 binding domain AC613_15360 PF00809 Pterin binding enzyme AC613_15360 PF02965 Vitamin B12 dependent methionine synthase, activation domain AC613_15370 PF00294 pfkB family carbohydrate kinase AC613_15375 PF07690 Major Facilitator Superfamily AC613_15380 PF00356 Bacterial regulatory proteins, lacI family AC613_15395 PF04102 SlyX AC613_15400 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AC613_15400 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AC613_15400 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AC613_15405 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AC613_15405 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AC613_15410 PF00255 Glutathione peroxidase AC613_15415 PF00392 Bacterial regulatory proteins, gntR family AC613_15420 PF00005 ABC transporter AC613_15445 PF10415 Fumarase C C-terminus AC613_15445 PF00206 Lyase AC613_15450 PF03471 Transporter associated domain AC613_15450 PF01595 Cyclin M transmembrane N-terminal domain AC613_15450 PF00571 CBS domain AC613_15460 PF00206 Lyase AC613_15460 PF08328 Adenylosuccinate lyase C-terminal AC613_15475 PF08007 Cupin superfamily protein AC613_15485 PF02779 Transketolase, pyrimidine binding domain AC613_15485 PF16078 2-oxoglutarate dehydrogenase N-terminus AC613_15485 PF16870 2-oxoglutarate dehydrogenase C-terminal AC613_15485 PF00676 Dehydrogenase E1 component AC613_15490 PF02817 e3 binding domain AC613_15490 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AC613_15490 PF00364 Biotin-requiring enzyme AC613_15495 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC613_15495 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AC613_15500 PF03641 Possible lysine decarboxylase AC613_15505 PF01205 Uncharacterized protein family UPF0029 AC613_15510 PF00005 ABC transporter AC613_15510 PF00664 ABC transporter transmembrane region AC613_15515 PF03466 LysR substrate binding domain AC613_15515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC613_15520 PF03412 Peptidase C39 family AC613_15520 PF00005 ABC transporter AC613_15520 PF00664 ABC transporter transmembrane region AC613_15545 PF08543 Phosphomethylpyrimidine kinase AC613_15550 PF00226 DnaJ domain AC613_15550 PF01556 DnaJ C terminal domain AC613_15550 PF00684 DnaJ central domain AC613_15555 PF00012 Hsp70 protein AC613_15560 PF01025 GrpE AC613_15565 PF01628 HrcA protein C terminal domain AC613_15565 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding AC613_15570 PF02463 RecF/RecN/SMC N terminal domain AC613_15575 PF01475 Ferric uptake regulator family AC613_15580 PF04355 SmpA / OmlA family AC613_15585 PF03658 RnfH family Ubiquitin AC613_15590 PF03364 Polyketide cyclase / dehydrase and lipid transport AC613_15595 PF01668 SmpB protein AC613_15610 PF00872 Transposase, Mutator family AC613_15640 PF00872 Transposase, Mutator family AC613_15655 PF00990 Diguanylate cyclase, GGDEF domain AC613_15665 PF08448 PAS fold AC613_15665 PF00990 Diguanylate cyclase, GGDEF domain AC613_15670 PF02321 Outer membrane efflux protein AC613_15675 PF00106 short chain dehydrogenase AC613_15680 PF00873 AcrB/AcrD/AcrF family AC613_15685 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC613_15700 PF03466 LysR substrate binding domain AC613_15700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC613_15705 PF05736 OprF membrane domain AC613_15705 PF00691 OmpA family AC613_15710 PF00875 DNA photolyase AC613_15710 PF03441 FAD binding domain of DNA photolyase AC613_15715 PF03796 DnaB-like helicase C terminal domain AC613_15715 PF00772 DnaB-like helicase N terminal domain AC613_15720 PF03358 NADPH-dependent FMN reductase AC613_15725 PF00733 Asparagine synthase AC613_15725 PF13537 Glutamine amidotransferase domain AC613_15730 PF02798 Glutathione S-transferase, N-terminal domain AC613_15730 PF00043 Glutathione S-transferase, C-terminal domain AC613_15740 PF02770 Acyl-CoA dehydrogenase, middle domain AC613_15740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC613_15740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC613_15755 PF01026 TatD related DNase AC613_15760 PF00899 ThiF family AC613_15775 PF00313 'Cold-shock' DNA-binding domain AC613_15785 PF02253 Phospholipase A1 AC613_15790 PF00484 Carbonic anhydrase AC613_15800 PF05681 Fumarate hydratase (Fumerase) AC613_15800 PF05683 Fumarase C-terminus AC613_15805 PF00005 ABC transporter AC613_15810 PF00175 Oxidoreductase NAD-binding domain AC613_15810 PF00970 Oxidoreductase FAD-binding domain AC613_15815 PF00255 Glutathione peroxidase AC613_15820 PF01432 Peptidase family M3 AC613_15825 PF12802 MarR family AC613_15850 PF00854 POT family AC613_15865 PF14310 Fibronectin type III-like domain AC613_15865 PF01915 Glycosyl hydrolase family 3 C-terminal domain AC613_15865 PF00933 Glycosyl hydrolase family 3 N terminal domain AC613_15875 PF07690 Major Facilitator Superfamily AC613_15880 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC613_15880 PF00529 HlyD membrane-fusion protein of T1SS AC613_15885 PF02321 Outer membrane efflux protein AC613_15900 PF03989 DNA gyrase C-terminal domain, beta-propeller AC613_15900 PF00521 DNA gyrase/topoisomerase IV, subunit A AC613_15905 PF05724 Thiopurine S-methyltransferase (TPMT) AC613_15910 PF00210 Ferritin-like domain AC613_15920 PF00593 TonB dependent receptor AC613_15920 PF07715 TonB-dependent Receptor Plug Domain AC613_15930 PF00733 Asparagine synthase AC613_15930 PF13537 Glutamine amidotransferase domain AC613_15935 PF01546 Peptidase family M20/M25/M40 AC613_15935 PF07687 Peptidase dimerisation domain AC613_15940 PF03960 ArsC family AC613_15945 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AC613_15945 PF14602 Hexapeptide repeat of succinyl-transferase AC613_15945 PF00132 Bacterial transferase hexapeptide (six repeats) AC613_15950 PF08335 GlnD PII-uridylyltransferase AC613_15950 PF01966 HD domain AC613_15950 PF01909 Nucleotidyltransferase domain AC613_15955 PF00557 Metallopeptidase family M24 AC613_15990 PF00318 Ribosomal protein S2 AC613_15995 PF00889 Elongation factor TS AC613_16000 PF00072 Response regulator receiver domain AC613_16000 PF00990 Diguanylate cyclase, GGDEF domain AC613_16005 PF00696 Amino acid kinase family AC613_16010 PF01765 Ribosome recycling factor AC613_16015 PF01255 Putative undecaprenyl diphosphate synthase AC613_16025 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AC613_16025 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AC613_16025 PF13288 DXP reductoisomerase C-terminal domain AC613_16030 PF17820 PDZ domain AC613_16030 PF02163 Peptidase family M50 AC613_16035 PF01103 Surface antigen AC613_16035 PF07244 Surface antigen variable number repeat AC613_16045 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AC613_16045 PF00132 Bacterial transferase hexapeptide (six repeats) AC613_16050 PF07977 FabA-like domain AC613_16055 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AC613_16055 PF00132 Bacterial transferase hexapeptide (six repeats) AC613_16060 PF02684 Lipid-A-disaccharide synthetase AC613_16065 PF01351 Ribonuclease HII AC613_16070 PF07733 Bacterial DNA polymerase III alpha NTPase domain AC613_16070 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AC613_16070 PF02811 PHP domain AC613_16070 PF14579 Helix-hairpin-helix motif AC613_16070 PF01336 OB-fold nucleic acid binding domain AC613_16075 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AC613_16110 PF03551 Transcriptional regulator PadR-like family AC613_16135 PF02592 Putative vitamin uptake transporter AC613_16145 PF02574 Homocysteine S-methyltransferase AC613_16150 PF00324 Amino acid permease AC613_16155 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AC613_16160 PF13732 Domain of unknown function (DUF4162) AC613_16160 PF00005 ABC transporter AC613_16170 PF05598 Transposase domain (DUF772) AC613_16170 PF01609 Transposase DDE domain AC613_16185 PF09334 tRNA synthetases class I (M) AC613_16185 PF01588 Putative tRNA binding domain AC613_16215 PF04545 Sigma-70, region 4 AC613_16215 PF04542 Sigma-70 region 2 AC613_16260 PF01042 Endoribonuclease L-PSP AC613_16270 PF09924 Uncharacterised conserved protein (DUF2156) AC613_16270 PF03706 Lysylphosphatidylglycerol synthase TM region AC613_16305 PF07690 Major Facilitator Superfamily AC613_16310 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AC613_16315 PF03831 PhnA domain AC613_16315 PF08274 PhnA Zinc-Ribbon AC613_16325 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AC613_16345 PF00872 Transposase, Mutator family AC613_16350 PF01258 Prokaryotic dksA/traR C4-type zinc finger AC613_16360 PF07043 Protein of unknown function (DUF1328) AC613_16365 PF01863 Protein of unknown function DUF45 AC613_16370 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AC613_16370 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AC613_16375 PF00082 Subtilase family AC613_16375 PF12951 Passenger-associated-transport-repeat AC613_16375 PF03797 Autotransporter beta-domain AC613_16380 PF00108 Thiolase, N-terminal domain AC613_16380 PF02803 Thiolase, C-terminal domain AC613_16395 PF00990 Diguanylate cyclase, GGDEF domain AC613_16395 PF00072 Response regulator receiver domain AC613_16410 PF04675 DNA ligase N terminus AC613_16410 PF01068 ATP dependent DNA ligase domain AC613_16410 PF04679 ATP dependent DNA ligase C terminal region AC613_16420 PF04675 DNA ligase N terminus AC613_16420 PF01068 ATP dependent DNA ligase domain AC613_16420 PF04679 ATP dependent DNA ligase C terminal region AC613_16425 PF00271 Helicase conserved C-terminal domain AC613_16425 PF08494 DEAD/H associated AC613_16425 PF00270 DEAD/DEAH box helicase AC613_16435 PF01494 FAD binding domain AC613_16440 PF00313 'Cold-shock' DNA-binding domain AC613_16445 PF01048 Phosphorylase superfamily AC613_16455 PF00933 Glycosyl hydrolase family 3 N terminal domain AC613_16460 PF04244 Deoxyribodipyrimidine photo-lyase-related protein AC613_16465 PF01593 Flavin containing amine oxidoreductase AC613_16470 PF01323 DSBA-like thioredoxin domain AC613_16480 PF05958 tRNA (Uracil-5-)-methyltransferase AC613_16490 PF02565 Recombination protein O C terminal AC613_16490 PF11967 Recombination protein O N terminal AC613_16495 PF01926 50S ribosome-binding GTPase AC613_16495 PF07650 KH domain AC613_16500 PF00035 Double-stranded RNA binding motif AC613_16500 PF14622 Ribonuclease-III-like AC613_16510 PF10502 Signal peptidase, peptidase S26 AC613_16515 PF00679 Elongation factor G C-terminus AC613_16515 PF00009 Elongation factor Tu GTP binding domain AC613_16515 PF06421 GTP-binding protein LepA C-terminus AC613_16515 PF03144 Elongation factor Tu domain 2 AC613_16520 PF13180 PDZ domain AC613_16530 PF08281 Sigma-70, region 4 AC613_16530 PF04542 Sigma-70 region 2 AC613_16535 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AC613_16535 PF00378 Enoyl-CoA hydratase/isomerase AC613_16535 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AC613_16545 PF05598 Transposase domain (DUF772) AC613_16545 PF01609 Transposase DDE domain AC613_16555 PF00989 PAS fold AC613_16555 PF11808 Phosphate regulon sensor protein PhoR AC613_16555 PF00512 His Kinase A (phospho-acceptor) domain AC613_16555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_16560 PF00486 Transcriptional regulatory protein, C terminal AC613_16560 PF00072 Response regulator receiver domain AC613_16570 PF08443 RimK-like ATP-grasp domain AC613_16570 PF18030 RimK PreATP-grasp domain AC613_16575 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AC613_16575 PF00128 Alpha amylase, catalytic domain AC613_16580 PF01609 Transposase DDE domain AC613_16580 PF05598 Transposase domain (DUF772) AC613_16605 PF00872 Transposase, Mutator family AC613_16620 PF01609 Transposase DDE domain AC613_16620 PF05598 Transposase domain (DUF772) AC613_16630 PF01609 Transposase DDE domain AC613_16630 PF05598 Transposase domain (DUF772) AC613_16645 PF05598 Transposase domain (DUF772) AC613_16645 PF01609 Transposase DDE domain AC613_16660 PF04002 RadC-like JAB domain AC613_16665 PF00872 Transposase, Mutator family AC613_16685 PF00872 Transposase, Mutator family AC613_16715 PF04610 TrbL/VirB6 plasmid conjugal transfer protein AC613_16735 PF00872 Transposase, Mutator family AC613_16765 PF00872 Transposase, Mutator family AC613_16775 PF00872 Transposase, Mutator family AC613_16785 PF00872 Transposase, Mutator family AC613_16820 PF00657 GDSL-like Lipase/Acylhydrolase AC613_16820 PF03797 Autotransporter beta-domain AC613_16830 PF05690 Thiazole biosynthesis protein ThiG AC613_16835 PF02390 Putative methyltransferase AC613_16840 PF03600 Citrate transporter AC613_16840 PF02080 TrkA-C domain AC613_16860 PF01557 Fumarylacetoacetate (FAA) hydrolase family AC613_16865 PF01741 Large-conductance mechanosensitive channel, MscL AC613_16880 PF00356 Bacterial regulatory proteins, lacI family AC613_16890 PF02837 Glycosyl hydrolases family 2, sugar binding domain AC613_16890 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain AC613_16890 PF00703 Glycosyl hydrolases family 2 AC613_16895 PF10566 Glycoside hydrolase 97 AC613_16895 PF14508 Glycosyl-hydrolase 97 N-terminal AC613_16895 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation AC613_16900 PF00135 Carboxylesterase family AC613_16905 PF00588 SpoU rRNA Methylase family AC613_16905 PF08032 RNA 2'-O ribose methyltransferase substrate binding AC613_16915 PF01433 Peptidase family M1 domain AC613_16915 PF11838 ERAP1-like C-terminal domain AC613_16920 PF00873 AcrB/AcrD/AcrF family AC613_16925 PF00529 HlyD membrane-fusion protein of T1SS AC613_16925 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC613_16930 PF01609 Transposase DDE domain AC613_16930 PF05598 Transposase domain (DUF772) AC613_16935 PF00009 Elongation factor Tu GTP binding domain AC613_16940 PF01507 Phosphoadenosine phosphosulfate reductase family AC613_16945 PF00175 Oxidoreductase NAD-binding domain AC613_16945 PF00258 Flavodoxin AC613_16945 PF00667 FAD binding domain AC613_16950 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AC613_16950 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AC613_16955 PF01507 Phosphoadenosine phosphosulfate reductase family AC613_16960 PF01609 Transposase DDE domain AC613_16960 PF05598 Transposase domain (DUF772) AC613_16980 PF00072 Response regulator receiver domain AC613_16980 PF00512 His Kinase A (phospho-acceptor) domain AC613_16980 PF01627 Hpt domain AC613_16980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_16990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC613_16990 PF03466 LysR substrate binding domain AC613_16995 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AC613_16995 PF14824 Sirohaem biosynthesis protein central AC613_16995 PF10414 Sirohaem synthase dimerisation region AC613_17000 PF00291 Pyridoxal-phosphate dependent enzyme AC613_17010 PF01661 Macro domain AC613_17015 PF00274 Fructose-bisphosphate aldolase class-I AC613_17020 PF02887 Pyruvate kinase, alpha/beta domain AC613_17020 PF00224 Pyruvate kinase, barrel domain AC613_17030 PF00162 Phosphoglycerate kinase AC613_17050 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AC613_17050 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AC613_17060 PF03922 OmpW family AC613_17065 PF03922 OmpW family AC613_17075 PF04273 Putative phosphatase (DUF442) AC613_17075 PF00753 Metallo-beta-lactamase superfamily AC613_17085 PF00528 Binding-protein-dependent transport system inner membrane component AC613_17090 PF03459 TOBE domain AC613_17090 PF00005 ABC transporter AC613_17125 PF03734 L,D-transpeptidase catalytic domain AC613_17125 PF01476 LysM domain AC613_17130 PF04225 Opacity-associated protein A LysM-like domain AC613_17130 PF01551 Peptidase family M23 AC613_17135 PF00593 TonB dependent receptor AC613_17135 PF07715 TonB-dependent Receptor Plug Domain AC613_17155 PF00456 Transketolase, thiamine diphosphate binding domain AC613_17155 PF02780 Transketolase, C-terminal domain AC613_17155 PF02779 Transketolase, pyrimidine binding domain AC613_17160 PF00375 Sodium:dicarboxylate symporter family AC613_17170 PF07584 Aerotolerance regulator N-terminal AC613_17170 PF00092 von Willebrand factor type A domain AC613_17190 PF07726 ATPase family associated with various cellular activities (AAA) AC613_17190 PF17863 AAA lid domain AC613_17195 PF00263 Bacterial type II and III secretion system protein AC613_17195 PF11741 AMIN domain AC613_17195 PF03958 Bacterial type II/III secretion system short domain AC613_17195 PF07660 Secretin and TonB N terminus short domain AC613_17220 PF17092 Penicillin-binding protein OB-like domain AC613_17220 PF00912 Transglycosylase AC613_17220 PF00905 Penicillin binding protein transpeptidase domain AC613_17230 PF00285 Citrate synthase, C-terminal domain AC613_17235 PF01197 Ribosomal protein L31 AC613_17240 PF01156 Inosine-uridine preferring nucleoside hydrolase AC613_17245 PF17191 RecG wedge domain AC613_17245 PF00271 Helicase conserved C-terminal domain AC613_17245 PF00270 DEAD/DEAH box helicase AC613_17250 PF01042 Endoribonuclease L-PSP AC613_17255 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AC613_17255 PF08666 SAF domain AC613_17260 PF03573 outer membrane porin, OprD family AC613_17265 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AC613_17265 PF13378 Enolase C-terminal domain-like AC613_17270 PF07690 Major Facilitator Superfamily AC613_17275 PF00171 Aldehyde dehydrogenase family AC613_17280 PF00701 Dihydrodipicolinate synthetase family AC613_17285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC613_17285 PF03466 LysR substrate binding domain AC613_17290 PF04607 Region found in RelA / SpoT proteins AC613_17290 PF02824 TGS domain AC613_17290 PF13291 ACT domain AC613_17295 PF01192 RNA polymerase Rpb6 AC613_17300 PF00625 Guanylate kinase AC613_17305 PF03755 YicC-like family, N-terminal region AC613_17305 PF08340 Domain of unknown function (DUF1732) AC613_17310 PF01138 3' exoribonuclease family, domain 1 AC613_17310 PF03725 3' exoribonuclease family, domain 2 AC613_17320 PF01725 Ham1 family AC613_17325 PF06969 HemN C-terminal domain AC613_17325 PF04055 Radical SAM superfamily AC613_17340 PF00557 Metallopeptidase family M24 AC613_17350 PF00557 Metallopeptidase family M24 AC613_17350 PF05195 Aminopeptidase P, N-terminal domain AC613_17355 PF03695 Uncharacterised protein family (UPF0149) AC613_17365 PF05164 Cell division protein ZapA AC613_17370 PF01812 5-formyltetrahydrofolate cyclo-ligase family AC613_17380 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AC613_17390 PF13369 Transglutaminase-like superfamily AC613_17395 PF00301 Rubredoxin AC613_17400 PF02581 Thiamine monophosphate synthase AC613_17410 PF00202 Aminotransferase class-III AC613_17415 PF00196 Bacterial regulatory proteins, luxR family AC613_17415 PF17874 MalT-like TPR region AC613_17420 PF00127 Copper binding proteins, plastocyanin/azurin family AC613_17425 PF00155 Aminotransferase class I and II AC613_17435 PF00034 Cytochrome c AC613_17435 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AC613_17440 PF01593 Flavin containing amine oxidoreductase AC613_17455 PF00202 Aminotransferase class-III AC613_17460 PF00520 Ion transport protein AC613_17460 PF00027 Cyclic nucleotide-binding domain AC613_17475 PF01569 PAP2 superfamily AC613_17480 PF01062 Bestrophin, RFP-TM, chloride channel AC613_17490 PF01225 Mur ligase family, catalytic domain AC613_17490 PF02875 Mur ligase family, glutamate ligase domain AC613_17490 PF08245 Mur ligase middle domain AC613_17500 PF00365 Phosphofructokinase AC613_17510 PF03030 Inorganic H+ pyrophosphatase AC613_17520 PF00719 Inorganic pyrophosphatase AC613_17530 PF07715 TonB-dependent Receptor Plug Domain AC613_17530 PF00593 TonB dependent receptor AC613_17535 PF00872 Transposase, Mutator family AC613_17550 PF13667 ThiC-associated domain AC613_17550 PF01964 Radical SAM ThiC family AC613_17555 PF07715 TonB-dependent Receptor Plug Domain AC613_17555 PF00593 TonB dependent receptor AC613_17560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC613_17560 PF02203 Tar ligand binding domain homologue AC613_17560 PF00672 HAMP domain AC613_17570 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AC613_17570 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AC613_17575 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AC613_17575 PF00205 Thiamine pyrophosphate enzyme, central domain AC613_17575 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AC613_17585 PF00291 Pyridoxal-phosphate dependent enzyme AC613_17590 PF00682 HMGL-like AC613_17590 PF08502 LeuA allosteric (dimerisation) domain AC613_17595 PF00180 Isocitrate/isopropylmalate dehydrogenase AC613_17600 PF00694 Aconitase C-terminal domain AC613_17605 PF00330 Aconitase family (aconitate hydratase) AC613_17610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC613_17615 PF17151 Periplasmic sensor domain AC613_17615 PF00990 Diguanylate cyclase, GGDEF domain AC613_17630 PF02321 Outer membrane efflux protein AC613_17635 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AC613_17640 PF03279 Bacterial lipid A biosynthesis acyltransferase AC613_17665 PF03949 Malic enzyme, NAD binding domain AC613_17665 PF01515 Phosphate acetyl/butaryl transferase AC613_17665 PF00390 Malic enzyme, N-terminal domain AC613_17670 PF00375 Sodium:dicarboxylate symporter family AC613_17680 PF00512 His Kinase A (phospho-acceptor) domain AC613_17680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_17680 PF02743 Cache domain AC613_17685 PF07690 Major Facilitator Superfamily AC613_17695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC613_17695 PF03466 LysR substrate binding domain AC613_17705 PF00248 Aldo/keto reductase family AC613_17720 PF00072 Response regulator receiver domain AC613_17720 PF00196 Bacterial regulatory proteins, luxR family AC613_17730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_17730 PF00512 His Kinase A (phospho-acceptor) domain AC613_17730 PF08521 Two-component sensor kinase N-terminal AC613_17735 PF00486 Transcriptional regulatory protein, C terminal AC613_17735 PF00072 Response regulator receiver domain AC613_17745 PF03600 Citrate transporter AC613_17750 PF00106 short chain dehydrogenase AC613_17755 PF00356 Bacterial regulatory proteins, lacI family AC613_17770 PF00128 Alpha amylase, catalytic domain AC613_17785 PF03193 RsgA GTPase AC613_17790 PF00155 Aminotransferase class I and II AC613_17805 PF01522 Polysaccharide deacetylase AC613_17810 PF00462 Glutaredoxin AC613_17825 PF01979 Amidohydrolase family AC613_17830 PF01979 Amidohydrolase family AC613_17850 PF01609 Transposase DDE domain AC613_17850 PF05598 Transposase domain (DUF772) AC613_17855 PF02645 Uncharacterised protein, DegV family COG1307 AC613_17860 PF01327 Polypeptide deformylase AC613_17865 PF03960 ArsC family AC613_17880 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) AC613_17885 PF01270 Glycosyl hydrolases family 8 AC613_17890 PF03170 Bacterial cellulose synthase subunit AC613_17895 PF00535 Glycosyl transferase family 2 AC613_17895 PF07238 PilZ domain AC613_17895 PF03552 Cellulose synthase AC613_17910 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AC613_17910 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AC613_17960 PF07702 UTRA domain AC613_17960 PF00392 Bacterial regulatory proteins, gntR family AC613_17975 PF03958 Bacterial type II/III secretion system short domain AC613_17975 PF00263 Bacterial type II and III secretion system protein AC613_17985 PF10741 Type II secretion system (T2SS), protein M subtype b AC613_17990 PF05137 Fimbrial assembly protein (PilN) AC613_17995 PF03934 Type II secretion system (T2SS), protein K AC613_18005 PF07963 Prokaryotic N-terminal methylation motif AC613_18010 PF12019 Type II transport protein GspH AC613_18015 PF08334 Type II secretion system (T2SS), protein G AC613_18020 PF00482 Type II secretion system (T2SS), protein F AC613_18025 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AC613_18025 PF00437 Type II/IV secretion system protein AC613_18030 PF00082 Subtilase family AC613_18030 PF04151 Bacterial pre-peptidase C-terminal domain AC613_18040 PF04151 Bacterial pre-peptidase C-terminal domain AC613_18040 PF00082 Subtilase family AC613_18045 PF05658 Head domain of trimeric autotransporter adhesin AC613_18045 PF03895 YadA-like membrane anchor domain AC613_18045 PF13018 Extended Signal Peptide of Type V secretion system AC613_18045 PF05662 Coiled stalk of trimeric autotransporter adhesin AC613_18055 PF02769 AIR synthase related protein, C-terminal domain AC613_18055 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AC613_18055 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AC613_18060 PF13098 Thioredoxin-like domain AC613_18060 PF10411 Disulfide bond isomerase protein N-terminus AC613_18065 PF00589 Phage integrase family AC613_18065 PF02899 Phage integrase, N-terminal SAM-like domain AC613_18080 PF03739 Lipopolysaccharide export system permease LptF/LptG AC613_18090 PF02789 Cytosol aminopeptidase family, N-terminal domain AC613_18090 PF00883 Cytosol aminopeptidase family, catalytic domain AC613_18105 PF10458 Valyl tRNA synthetase tRNA binding arm AC613_18105 PF00133 tRNA synthetases class I (I, L, M and V) AC613_18105 PF08264 Anticodon-binding domain of tRNA AC613_18110 PF00593 TonB dependent receptor AC613_18110 PF07715 TonB-dependent Receptor Plug Domain AC613_18115 PF01464 Transglycosylase SLT domain AC613_18115 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AC613_18125 PF00872 Transposase, Mutator family AC613_18150 PF01066 CDP-alcohol phosphatidyltransferase AC613_18160 PF03129 Anticodon binding domain AC613_18160 PF04073 Aminoacyl-tRNA editing domain AC613_18160 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AC613_18165 PF00816 H-NS histone family AC613_18175 PF02405 Permease MlaE AC613_18180 PF00005 ABC transporter AC613_18185 PF03886 ABC-type transport auxiliary lipoprotein component AC613_18185 PF02470 MlaD protein AC613_18205 PF01144 Coenzyme A transferase AC613_18210 PF01144 Coenzyme A transferase AC613_18215 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AC613_18215 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AC613_18215 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AC613_18215 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AC613_18220 PF01050 Mannose-6-phosphate isomerase AC613_18220 PF00483 Nucleotidyl transferase AC613_18225 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AC613_18225 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AC613_18225 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AC613_18230 PF04321 RmlD substrate binding domain AC613_18235 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AC613_18240 PF00483 Nucleotidyl transferase AC613_18245 PF16363 GDP-mannose 4,6 dehydratase AC613_18250 PF01012 Electron transfer flavoprotein domain AC613_18255 PF01012 Electron transfer flavoprotein domain AC613_18255 PF00766 Electron transfer flavoprotein FAD-binding domain AC613_18265 PF00535 Glycosyl transferase family 2 AC613_18290 PF16363 GDP-mannose 4,6 dehydratase AC613_18295 PF16363 GDP-mannose 4,6 dehydratase AC613_18300 PF13477 Glycosyl transferase 4-like AC613_18300 PF00534 Glycosyl transferases group 1 AC613_18305 PF13847 Methyltransferase domain AC613_18305 PF00069 Protein kinase domain AC613_18310 PF00005 ABC transporter AC613_18320 PF00534 Glycosyl transferases group 1 AC613_18320 PF13439 Glycosyltransferase Family 4 AC613_18325 PF01053 Cys/Met metabolism PLP-dependent enzyme AC613_18330 PF00571 CBS domain AC613_18330 PF00291 Pyridoxal-phosphate dependent enzyme AC613_18350 PF00437 Type II/IV secretion system protein AC613_18355 PF02798 Glutathione S-transferase, N-terminal domain AC613_18355 PF14497 Glutathione S-transferase, C-terminal domain AC613_18365 PF00270 DEAD/DEAH box helicase AC613_18365 PF00271 Helicase conserved C-terminal domain AC613_18375 PF00593 TonB dependent receptor AC613_18375 PF07715 TonB-dependent Receptor Plug Domain AC613_18380 PF01242 6-pyruvoyl tetrahydropterin synthase AC613_18420 PF13185 GAF domain AC613_18430 PF00756 Putative esterase AC613_18435 PF07715 TonB-dependent Receptor Plug Domain AC613_18435 PF00593 TonB dependent receptor AC613_18440 PF13419 Haloacid dehalogenase-like hydrolase AC613_18445 PF00817 impB/mucB/samB family AC613_18445 PF11799 impB/mucB/samB family C-terminal domain AC613_18450 PF07977 FabA-like domain AC613_18455 PF02801 Beta-ketoacyl synthase, C-terminal domain AC613_18455 PF00109 Beta-ketoacyl synthase, N-terminal domain AC613_18465 PF01432 Peptidase family M3 AC613_18480 PF07731 Multicopper oxidase AC613_18480 PF00394 Multicopper oxidase AC613_18480 PF07732 Multicopper oxidase AC613_18485 PF05275 Copper resistance protein B precursor (CopB) AC613_18490 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AC613_18515 PF01380 SIS domain AC613_18520 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC613_18525 PF00005 ABC transporter AC613_18530 PF02687 FtsX-like permease family AC613_18530 PF12704 MacB-like periplasmic core domain AC613_18535 PF12704 MacB-like periplasmic core domain AC613_18535 PF00005 ABC transporter AC613_18535 PF02687 FtsX-like permease family AC613_18545 PF00158 Sigma-54 interaction domain AC613_18545 PF02954 Bacterial regulatory protein, Fis family AC613_18545 PF00072 Response regulator receiver domain AC613_18550 PF00512 His Kinase A (phospho-acceptor) domain AC613_18550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_18555 PF14602 Hexapeptide repeat of succinyl-transferase AC613_18555 PF12804 MobA-like NTP transferase domain AC613_18555 PF00132 Bacterial transferase hexapeptide (six repeats) AC613_18575 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AC613_18575 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AC613_18580 PF02874 ATP synthase alpha/beta family, beta-barrel domain AC613_18580 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AC613_18585 PF00231 ATP synthase AC613_18590 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AC613_18590 PF02874 ATP synthase alpha/beta family, beta-barrel domain AC613_18590 PF00306 ATP synthase alpha/beta chain, C terminal domain AC613_18595 PF00213 ATP synthase delta (OSCP) subunit AC613_18600 PF00430 ATP synthase B/B' CF(0) AC613_18605 PF00137 ATP synthase subunit C AC613_18610 PF00119 ATP synthase A chain AC613_18630 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC613_18630 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AC613_18640 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AC613_18640 PF00364 Biotin-requiring enzyme AC613_18640 PF02817 e3 binding domain AC613_18675 PF03180 NLPA lipoprotein AC613_18680 PF00528 Binding-protein-dependent transport system inner membrane component AC613_18685 PF09383 NIL domain AC613_18685 PF00005 ABC transporter AC613_18690 PF00892 EamA-like transporter family AC613_18695 PF04461 Protein of unknown function (DUF520) AC613_18705 PF18415 Histidine kinase receptor ArcB trans-membrane domain AC613_18705 PF01627 Hpt domain AC613_18705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_18705 PF00512 His Kinase A (phospho-acceptor) domain AC613_18705 PF00072 Response regulator receiver domain AC613_18705 PF00989 PAS fold AC613_18740 PF01479 S4 domain AC613_18740 PF00849 RNA pseudouridylate synthase AC613_18745 PF05175 Methyltransferase small domain AC613_18745 PF08468 Methyltransferase small domain N-terminal AC613_18755 PF07995 Glucose / Sorbosone dehydrogenase AC613_18765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_18765 PF00512 His Kinase A (phospho-acceptor) domain AC613_18765 PF00989 PAS fold AC613_18785 PF00842 Alanine racemase, C-terminal domain AC613_18785 PF01168 Alanine racemase, N-terminal domain AC613_18790 PF01266 FAD dependent oxidoreductase AC613_18795 PF01037 Lrp/AsnC ligand binding domain AC613_18805 PF01641 SelR domain AC613_18815 PF01618 MotA/TolQ/ExbB proton channel family AC613_18820 PF00691 OmpA family AC613_18820 PF13677 Membrane MotB of proton-channel complex MotA/MotB AC613_18850 PF00005 ABC transporter AC613_18855 PF00999 Sodium/hydrogen exchanger family AC613_18860 PF02469 Fasciclin domain AC613_18865 PF03167 Uracil DNA glycosylase superfamily AC613_18875 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AC613_18885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC613_18885 PF03466 LysR substrate binding domain AC613_18890 PF03358 NADPH-dependent FMN reductase AC613_18895 PF00248 Aldo/keto reductase family AC613_18905 PF05649 Peptidase family M13 AC613_18905 PF01431 Peptidase family M13 AC613_18920 PF13520 Amino acid permease AC613_18930 PF04397 LytTr DNA-binding domain AC613_18930 PF00072 Response regulator receiver domain AC613_18935 PF00672 HAMP domain AC613_18935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_18935 PF06580 Histidine kinase AC613_18935 PF02743 Cache domain AC613_18950 PF05974 Domain of unknown function (DUF892) AC613_18955 PF05067 Manganese containing catalase AC613_18975 PF01739 CheR methyltransferase, SAM binding domain AC613_18975 PF03705 CheR methyltransferase, all-alpha domain AC613_18975 PF08448 PAS fold AC613_18975 PF01339 CheB methylesterase AC613_18990 PF02954 Bacterial regulatory protein, Fis family AC613_18990 PF00072 Response regulator receiver domain AC613_18990 PF00158 Sigma-54 interaction domain AC613_19005 PF01654 Cytochrome bd terminal oxidase subunit I AC613_19010 PF02322 Cytochrome bd terminal oxidase subunit II AC613_19030 PF16363 GDP-mannose 4,6 dehydratase AC613_19040 PF03275 UDP-galactopyranose mutase AC613_19050 PF00005 ABC transporter AC613_19050 PF00664 ABC transporter transmembrane region AC613_19065 PF00107 Zinc-binding dehydrogenase AC613_19065 PF08240 Alcohol dehydrogenase GroES-like domain AC613_19065 PF13823 Alcohol dehydrogenase GroES-associated AC613_19110 PF07715 TonB-dependent Receptor Plug Domain AC613_19110 PF00593 TonB dependent receptor AC613_19125 PF00005 ABC transporter AC613_19135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC613_19135 PF03466 LysR substrate binding domain AC613_19140 PF01042 Endoribonuclease L-PSP AC613_19170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC613_19170 PF03466 LysR substrate binding domain AC613_19175 PF02525 Flavodoxin-like fold AC613_19205 PF01740 STAS domain AC613_19205 PF00916 Sulfate permease family AC613_19215 PF00557 Metallopeptidase family M24 AC613_19245 PF05598 Transposase domain (DUF772) AC613_19245 PF01609 Transposase DDE domain AC613_19260 PF05598 Transposase domain (DUF772) AC613_19260 PF01609 Transposase DDE domain AC613_19270 PF00872 Transposase, Mutator family AC613_19285 PF00872 Transposase, Mutator family AC613_19305 PF04539 Sigma-70 region 3 AC613_19305 PF04545 Sigma-70, region 4 AC613_19305 PF00140 Sigma-70 factor, region 1.2 AC613_19305 PF03979 Sigma-70 factor, region 1.1 AC613_19305 PF04546 Sigma-70, non-essential region AC613_19305 PF04542 Sigma-70 region 2 AC613_19310 PF02580 D-Tyr-tRNA(Tyr) deacylase AC613_19315 PF03279 Bacterial lipid A biosynthesis acyltransferase AC613_19330 PF00925 GTP cyclohydrolase II AC613_19350 PF00535 Glycosyl transferase family 2 AC613_19365 PF01029 NusB family AC613_19365 PF01189 16S rRNA methyltransferase RsmB/F AC613_19370 PF00551 Formyl transferase AC613_19370 PF02911 Formyl transferase, C-terminal domain AC613_19375 PF01327 Polypeptide deformylase AC613_19380 PF01476 LysM domain AC613_19385 PF17782 DprA winged helix domain AC613_19385 PF02481 DNA recombination-mediator protein A AC613_19390 PF04361 Protein of unknown function (DUF494) AC613_19395 PF07963 Prokaryotic N-terminal methylation motif AC613_19395 PF00114 Pilin (bacterial filament) AC613_19405 PF13368 Topoisomerase C-terminal repeat AC613_19405 PF01751 Toprim domain AC613_19405 PF01131 DNA topoisomerase AC613_19410 PF01300 Telomere recombination AC613_19440 PF01343 Peptidase family S49 AC613_19445 PF01554 MatE AC613_19465 PF00271 Helicase conserved C-terminal domain AC613_19465 PF17764 3′ DNA-binding domain (3′BD) AC613_19465 PF18074 Primosomal protein N C-terminal domain AC613_19465 PF00270 DEAD/DEAH box helicase AC613_19465 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AC613_19470 PF00043 Glutathione S-transferase, C-terminal domain AC613_19470 PF13417 Glutathione S-transferase, N-terminal domain AC613_19485 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC613_19495 PF04545 Sigma-70, region 4 AC613_19495 PF04542 Sigma-70 region 2 AC613_19500 PF03167 Uracil DNA glycosylase superfamily AC613_19505 PF00072 Response regulator receiver domain AC613_19505 PF01339 CheB methylesterase AC613_19510 PF18075 FtsX extracellular domain AC613_19515 PF00005 ABC transporter AC613_19520 PF00271 Helicase conserved C-terminal domain AC613_19520 PF12300 ATP-dependent RNA helicase RhlB AC613_19520 PF00270 DEAD/DEAH box helicase AC613_19525 PF00085 Thioredoxin AC613_19530 PF07497 Rho termination factor, RNA-binding domain AC613_19530 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AC613_19530 PF07498 Rho termination factor, N-terminal domain AC613_19535 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AC613_19540 PF03466 LysR substrate binding domain AC613_19540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC613_19550 PF03971 Monomeric isocitrate dehydrogenase AC613_19560 PF01476 LysM domain AC613_19560 PF04972 BON domain AC613_19565 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AC613_19565 PF14489 QueF-like protein AC613_19570 PF07687 Peptidase dimerisation domain AC613_19570 PF01546 Peptidase family M20/M25/M40 AC613_19575 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC613_19580 PF00873 AcrB/AcrD/AcrF family AC613_19585 PF00873 AcrB/AcrD/AcrF family AC613_19600 PF07063 Domain of unknown function (DUF1338) AC613_19640 PF01427 D-ala-D-ala dipeptidase AC613_19645 PF01510 N-acetylmuramoyl-L-alanine amidase AC613_19655 PF13378 Enolase C-terminal domain-like AC613_19655 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AC613_19665 PF13520 Amino acid permease AC613_19685 PF05360 yiaA/B two helix domain AC613_19700 PF00872 Transposase, Mutator family AC613_19705 PF07995 Glucose / Sorbosone dehydrogenase AC613_19710 PF01915 Glycosyl hydrolase family 3 C-terminal domain AC613_19710 PF14310 Fibronectin type III-like domain AC613_19710 PF00933 Glycosyl hydrolase family 3 N terminal domain AC613_19715 PF02152 Dihydroneopterin aldolase AC613_19720 PF00814 Glycoprotease family AC613_19725 PF01165 Ribosomal protein S21 AC613_19730 PF09424 Yqey-like protein AC613_19735 PF03631 Virulence factor BrkB AC613_19740 PF01807 CHC2 zinc finger AC613_19740 PF08275 DNA primase catalytic core, N-terminal domain AC613_19740 PF08278 DNA primase DnaG DnaB-binding AC613_19740 PF10410 DnaB-helicase binding domain of primase AC613_19745 PF13593 SBF-like CPA transporter family (DUF4137) AC613_19755 PF01040 UbiA prenyltransferase family AC613_19780 PF00510 Cytochrome c oxidase subunit III AC613_19785 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AC613_19795 PF00115 Cytochrome C and Quinol oxidase polypeptide I AC613_19800 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AC613_19800 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AC613_19810 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AC613_19810 PF00171 Aldehyde dehydrogenase family AC613_19810 PF01619 Proline dehydrogenase AC613_19810 PF14850 DNA-binding domain of Proline dehydrogenase AC613_19845 PF00579 tRNA synthetases class I (W and Y) AC613_19850 PF01551 Peptidase family M23 AC613_19850 PF04225 Opacity-associated protein A LysM-like domain AC613_19855 PF03702 Anhydro-N-acetylmuramic acid kinase AC613_19865 PF07690 Major Facilitator Superfamily AC613_19870 PF03372 Endonuclease/Exonuclease/phosphatase family AC613_19875 PF00156 Phosphoribosyl transferase domain AC613_19885 PF13614 AAA domain AC613_19890 PF17762 HTH domain found in ParB protein AC613_19890 PF02195 ParB-like nuclease domain AC613_19905 PF01370 NAD dependent epimerase/dehydratase family AC613_19910 PF00535 Glycosyl transferase family 2 AC613_19925 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AC613_19925 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AC613_19925 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AC613_19925 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AC613_19930 PF00692 dUTPase AC613_19935 PF04127 DNA / pantothenate metabolism flavoprotein AC613_19935 PF02441 Flavoprotein AC613_19940 PF04002 RadC-like JAB domain AC613_19945 PF05746 DALR anticodon binding domain AC613_19945 PF03485 Arginyl tRNA synthetase N terminal domain AC613_19945 PF00750 tRNA synthetases class I (R) AC613_19960 PF00106 short chain dehydrogenase AC613_19965 PF01757 Acyltransferase family AC613_19970 PF03033 Glycosyltransferase family 28 N-terminal domain AC613_19980 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AC613_19980 PF17944 Arginine decarboxylase C-terminal helical extension AC613_19980 PF17810 Arginine decarboxylase helical bundle domain AC613_19985 PF17284 Spermidine synthase tetramerisation domain AC613_20010 PF00963 Cohesin domain AC613_20010 PF00754 F5/8 type C domain AC613_20010 PF07555 beta-N-acetylglucosaminidase AC613_20010 PF02838 Glycosyl hydrolase family 20, domain 2 AC613_20010 PF00041 Fibronectin type III domain AC613_20015 PF00543 Nitrogen regulatory protein P-II AC613_20020 PF04380 Membrane fusogenic activity AC613_20025 PF01078 Magnesium chelatase, subunit ChlI AC613_20025 PF13335 Magnesium chelatase, subunit ChlI C-terminal AC613_20040 PF12792 CSS motif domain associated with EAL AC613_20040 PF00563 EAL domain AC613_20045 PF00487 Fatty acid desaturase AC613_20050 PF00175 Oxidoreductase NAD-binding domain AC613_20050 PF00111 2Fe-2S iron-sulfur cluster binding domain AC613_20050 PF00970 Oxidoreductase FAD-binding domain AC613_20055 PF00440 Bacterial regulatory proteins, tetR family AC613_20070 PF01609 Transposase DDE domain AC613_20070 PF05598 Transposase domain (DUF772) AC613_20080 PF01139 tRNA-splicing ligase RtcB AC613_20120 PF01370 NAD dependent epimerase/dehydratase family AC613_20120 PF08338 Domain of unknown function (DUF1731) AC613_20125 PF00486 Transcriptional regulatory protein, C terminal AC613_20125 PF00072 Response regulator receiver domain AC613_20130 PF00512 His Kinase A (phospho-acceptor) domain AC613_20130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_20130 PF08521 Two-component sensor kinase N-terminal AC613_20150 PF00595 PDZ domain AC613_20170 PF01594 AI-2E family transporter AC613_20175 PF13419 Haloacid dehalogenase-like hydrolase AC613_20180 PF00883 Cytosol aminopeptidase family, catalytic domain AC613_20180 PF02789 Cytosol aminopeptidase family, N-terminal domain AC613_20185 PF00872 Transposase, Mutator family AC613_20190 PF00872 Transposase, Mutator family AC613_20200 PF00199 Catalase AC613_20215 PF00072 Response regulator receiver domain AC613_20215 PF00196 Bacterial regulatory proteins, luxR family AC613_20220 PF07730 Histidine kinase AC613_20225 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC613_20230 PF00005 ABC transporter AC613_20250 PF00892 EamA-like transporter family AC613_20255 PF00892 EamA-like transporter family AC613_20275 PF00753 Metallo-beta-lactamase superfamily AC613_20280 PF00579 tRNA synthetases class I (W and Y) AC613_20285 PF00872 Transposase, Mutator family AC613_20290 PF05532 CsbD-like AC613_20305 PF00491 Arginase family AC613_20330 PF02223 Thymidylate kinase AC613_20345 PF03309 Type III pantothenate kinase AC613_20350 PF02237 Biotin protein ligase C terminal domain AC613_20350 PF08279 HTH domain AC613_20350 PF03099 Biotin/lipoate A/B protein ligase family AC613_20360 PF06167 Glucose-regulated metallo-peptidase M90 AC613_20375 PF00672 HAMP domain AC613_20375 PF00512 His Kinase A (phospho-acceptor) domain AC613_20375 PF16527 Two-component sensor protein CpxA, periplasmic domain AC613_20375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_20380 PF00486 Transcriptional regulatory protein, C terminal AC613_20380 PF00072 Response regulator receiver domain AC613_20390 PF05598 Transposase domain (DUF772) AC613_20390 PF01609 Transposase DDE domain AC613_20395 PF01207 Dihydrouridine synthase (Dus) AC613_20410 PF00199 Catalase AC613_20410 PF06628 Catalase-related immune-responsive AC613_20415 PF06733 DEAD_2 AC613_20415 PF13307 Helicase C-terminal domain AC613_20430 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AC613_20430 PF01488 Shikimate / quinate 5-dehydrogenase AC613_20430 PF08501 Shikimate dehydrogenase substrate binding domain AC613_20440 PF00667 FAD binding domain AC613_20440 PF00258 Flavodoxin AC613_20440 PF00175 Oxidoreductase NAD-binding domain AC613_20450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC613_20450 PF03466 LysR substrate binding domain AC613_20460 PF00490 Delta-aminolevulinic acid dehydratase AC613_20485 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AC613_20485 PF00326 Prolyl oligopeptidase family AC613_20490 PF00043 Glutathione S-transferase, C-terminal domain AC613_20490 PF02798 Glutathione S-transferase, N-terminal domain AC613_20515 PF04820 Tryptophan halogenase AC613_20530 PF00005 ABC transporter AC613_20540 PF01381 Helix-turn-helix AC613_20550 PF01229 Glycosyl hydrolases family 39 AC613_20555 PF02583 Metal-sensitive transcriptional repressor AC613_20560 PF01545 Cation efflux family AC613_20570 PF00593 TonB dependent receptor AC613_20570 PF07715 TonB-dependent Receptor Plug Domain AC613_20580 PF12833 Helix-turn-helix domain AC613_20580 PF01965 DJ-1/PfpI family AC613_20585 PF00175 Oxidoreductase NAD-binding domain AC613_20585 PF01383 CpcD/allophycocyanin linker domain AC613_20590 PF00005 ABC transporter AC613_20595 PF01061 ABC-2 type transporter AC613_20600 PF08546 Ketopantoate reductase PanE/ApbA C terminal AC613_20600 PF02558 Ketopantoate reductase PanE/ApbA AC613_20630 PF00268 Ribonucleotide reductase, small chain AC613_20635 PF00317 Ribonucleotide reductase, all-alpha domain AC613_20635 PF02867 Ribonucleotide reductase, barrel domain AC613_20635 PF03477 ATP cone domain AC613_20645 PF00583 Acetyltransferase (GNAT) family AC613_20645 PF13607 Succinyl-CoA ligase like flavodoxin domain AC613_20645 PF13380 CoA binding domain AC613_20650 PF03448 MgtE intracellular N domain AC613_20650 PF01769 Divalent cation transporter AC613_20650 PF00571 CBS domain AC613_20655 PF00194 Eukaryotic-type carbonic anhydrase AC613_20665 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AC613_20665 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AC613_20670 PF00723 Glycosyl hydrolases family 15 AC613_20685 PF05166 YcgL domain AC613_20690 PF00109 Beta-ketoacyl synthase, N-terminal domain AC613_20690 PF02801 Beta-ketoacyl synthase, C-terminal domain AC613_20700 PF00535 Glycosyl transferase family 2 AC613_20745 PF07977 FabA-like domain AC613_20750 PF01553 Acyltransferase AC613_20760 PF00550 Phosphopantetheine attachment site AC613_20765 PF04820 Tryptophan halogenase AC613_20785 PF00326 Prolyl oligopeptidase family AC613_20785 PF07676 WD40-like Beta Propeller Repeat AC613_20790 PF01609 Transposase DDE domain AC613_20790 PF05598 Transposase domain (DUF772) AC613_20805 PF01218 Coproporphyrinogen III oxidase AC613_20810 PF01367 5'-3' exonuclease, C-terminal SAM fold AC613_20810 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AC613_20810 PF00476 DNA polymerase family A AC613_20810 PF01612 3'-5' exonuclease AC613_20840 PF00069 Protein kinase domain AC613_20880 PF04717 Type VI secretion system, phage-baseplate injector AC613_20895 PF00069 Protein kinase domain AC613_20895 PF03793 PASTA domain AC613_20905 PF08281 Sigma-70, region 4 AC613_20905 PF04542 Sigma-70 region 2 AC613_20920 PF00328 Histidine phosphatase superfamily (branch 2) AC613_20950 PF00004 ATPase family associated with various cellular activities (AAA) AC613_20950 PF07724 AAA domain (Cdc48 subfamily) AC613_20950 PF17871 AAA lid domain AC613_20950 PF10431 C-terminal, D2-small domain, of ClpB protein AC613_20975 PF05638 Type VI secretion system effector, Hcp AC613_21000 PF12464 Maltose acetyltransferase AC613_21000 PF14602 Hexapeptide repeat of succinyl-transferase AC613_21010 PF13361 UvrD-like helicase C-terminal domain AC613_21010 PF00580 UvrD/REP helicase N-terminal domain AC613_21020 PF13091 PLD-like domain AC613_21020 PF13396 Phospholipase_D-nuclease N-terminal AC613_21025 PF03466 LysR substrate binding domain AC613_21025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC613_21030 PF03737 Aldolase/RraA AC613_21035 PF04303 PrpF protein AC613_21045 PF00471 Ribosomal protein L33 AC613_21050 PF00830 Ribosomal L28 family AC613_21055 PF00873 AcrB/AcrD/AcrF family AC613_21060 PF13533 Biotin-lipoyl like AC613_21080 PF02527 rRNA small subunit methyltransferase G AC613_21085 PF09423 PhoD-like phosphatase AC613_21085 PF16655 PhoD-like phosphatase, N-terminal domain AC613_21090 PF09423 PhoD-like phosphatase AC613_21090 PF16655 PhoD-like phosphatase, N-terminal domain AC613_21095 PF01648 4'-phosphopantetheinyl transferase superfamily AC613_21105 PF04226 Transglycosylase associated protein AC613_21115 PF03372 Endonuclease/Exonuclease/phosphatase family AC613_21120 PF00480 ROK family AC613_21130 PF00639 PPIC-type PPIASE domain AC613_21130 PF09312 SurA N-terminal domain AC613_21140 PF00474 Sodium:solute symporter family AC613_21145 PF04341 Protein of unknown function, DUF485 AC613_21155 PF13193 AMP-binding enzyme C-terminal domain AC613_21155 PF00501 AMP-binding enzyme AC613_21155 PF16177 Acetyl-coenzyme A synthetase N-terminus AC613_21160 PF00196 Bacterial regulatory proteins, luxR family AC613_21160 PF00072 Response regulator receiver domain AC613_21195 PF00248 Aldo/keto reductase family AC613_21210 PF01557 Fumarylacetoacetate (FAA) hydrolase family AC613_21215 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AC613_21215 PF13378 Enolase C-terminal domain-like AC613_21220 PF05336 L-rhamnose mutarotase AC613_21225 PF07690 Major Facilitator Superfamily AC613_21230 PF09339 IclR helix-turn-helix domain AC613_21230 PF01614 Bacterial transcriptional regulator AC613_21235 PF02659 Putative manganese efflux pump AC613_21240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_21240 PF00512 His Kinase A (phospho-acceptor) domain AC613_21250 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain AC613_21250 PF06165 Glycosyltransferase family 36 AC613_21265 PF13570 PQQ-like domain AC613_21265 PF13360 PQQ-like domain AC613_21265 PF01011 PQQ enzyme repeat AC613_21285 PF04357 TamB, inner membrane protein subunit of TAM complex AC613_21290 PF17243 POTRA domain TamA domain 1 AC613_21290 PF01103 Surface antigen AC613_21300 PF01609 Transposase DDE domain AC613_21300 PF05598 Transposase domain (DUF772) AC613_21305 PF01609 Transposase DDE domain AC613_21305 PF05598 Transposase domain (DUF772) AC613_21310 PF05598 Transposase domain (DUF772) AC613_21310 PF01609 Transposase DDE domain AC613_21335 PF05746 DALR anticodon binding domain AC613_21335 PF02092 Glycyl-tRNA synthetase beta subunit AC613_21340 PF02091 Glycyl-tRNA synthetase alpha subunit AC613_21345 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AC613_21345 PF00437 Type II/IV secretion system protein AC613_21355 PF00117 Glutamine amidotransferase class-I AC613_21355 PF00958 GMP synthase C terminal domain AC613_21365 PF00902 Sec-independent protein translocase protein (TatC) AC613_21370 PF02416 mttA/Hcf106 family AC613_21375 PF02416 mttA/Hcf106 family AC613_21385 PF00762 Ferrochelatase AC613_21390 PF12697 Alpha/beta hydrolase family AC613_21405 PF04381 Putative exonuclease, RdgC AC613_21410 PF01171 PP-loop family AC613_21420 PF00356 Bacterial regulatory proteins, lacI family AC613_21425 PF03648 Glycosyl hydrolase family 67 N-terminus AC613_21425 PF07488 Glycosyl hydrolase family 67 middle domain AC613_21425 PF07477 Glycosyl hydrolase family 67 C-terminus AC613_21435 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AC613_21435 PF13378 Enolase C-terminal domain-like AC613_21440 PF04616 Glycosyl hydrolases family 43 AC613_21440 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AC613_21445 PF01915 Glycosyl hydrolase family 3 C-terminal domain AC613_21445 PF07691 PA14 domain AC613_21445 PF00933 Glycosyl hydrolase family 3 N terminal domain AC613_21445 PF14310 Fibronectin type III-like domain AC613_21450 PF01232 Mannitol dehydrogenase Rossmann domain AC613_21450 PF08125 Mannitol dehydrogenase C-terminal domain AC613_21480 PF00171 Aldehyde dehydrogenase family AC613_21505 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AC613_21505 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AC613_21520 PF05598 Transposase domain (DUF772) AC613_21520 PF01609 Transposase DDE domain AC613_21525 PF08450 SMP-30/Gluconolactonase/LRE-like region AC613_21530 PF00331 Glycosyl hydrolase family 10 AC613_21535 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AC613_21535 PF16355 Domain of unknown function (DUF4982) AC613_21535 PF02837 Glycosyl hydrolases family 2, sugar binding domain AC613_21535 PF00703 Glycosyl hydrolases family 2 AC613_21535 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 AC613_21540 PF02614 Glucuronate isomerase AC613_21560 PF03422 Carbohydrate binding module (family 6) AC613_21560 PF00331 Glycosyl hydrolase family 10 AC613_21560 PF00553 Cellulose binding domain AC613_21580 PF04616 Glycosyl hydrolases family 43 AC613_21610 PF08240 Alcohol dehydrogenase GroES-like domain AC613_21610 PF00550 Phosphopantetheine attachment site AC613_21610 PF00698 Acyl transferase domain AC613_21610 PF00107 Zinc-binding dehydrogenase AC613_21610 PF14765 Polyketide synthase dehydratase AC613_21610 PF00109 Beta-ketoacyl synthase, N-terminal domain AC613_21610 PF16197 Ketoacyl-synthetase C-terminal extension AC613_21610 PF08659 KR domain AC613_21610 PF02801 Beta-ketoacyl synthase, C-terminal domain AC613_21615 PF01553 Acyltransferase AC613_21625 PF00356 Bacterial regulatory proteins, lacI family AC613_21645 PF04820 Tryptophan halogenase AC613_21650 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AC613_21655 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) AC613_21660 PF04337 Protein of unknown function, DUF480 AC613_21670 PF13302 Acetyltransferase (GNAT) domain AC613_21675 PF00580 UvrD/REP helicase N-terminal domain AC613_21675 PF13361 UvrD-like helicase C-terminal domain AC613_21680 PF00265 Thymidine kinase AC613_21685 PF00360 Phytochrome region AC613_21685 PF08446 PAS fold AC613_21685 PF00512 His Kinase A (phospho-acceptor) domain AC613_21685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC613_21685 PF01590 GAF domain AC613_21690 PF04349 Periplasmic glucan biosynthesis protein, MdoG AC613_21700 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AC613_21700 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AC613_21700 PF06827 Zinc finger found in FPG and IleRS AC613_21730 PF03594 Benzoate membrane transport protein AC613_21735 PF01590 GAF domain AC613_21735 PF08446 PAS fold AC613_21735 PF00360 Phytochrome region AC613_21735 PF13426 PAS domain AC613_21740 PF01126 Heme oxygenase AC613_21745 PF07690 Major Facilitator Superfamily AC613_21750 PF01263 Aldose 1-epimerase AC613_21760 PF02810 SEC-C motif AC613_21765 PF01925 Sulfite exporter TauE/SafE AC613_21775 PF00872 Transposase, Mutator family AC613_21795 PF01227 GTP cyclohydrolase I AC613_21805 PF07869 Protein of unknown function (DUF1656) AC613_21810 PF00529 HlyD membrane-fusion protein of T1SS AC613_21810 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC613_21815 PF02321 Outer membrane efflux protein AC613_21820 PF04632 Fusaric acid resistance protein family AC613_21825 PF00083 Sugar (and other) transporter AC613_21835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC613_21835 PF03466 LysR substrate binding domain AC613_21840 PF00106 short chain dehydrogenase AC613_21850 PF13091 PLD-like domain AC613_21850 PF13396 Phospholipase_D-nuclease N-terminal AC613_21870 PF00872 Transposase, Mutator family AC613_21895 PF00849 RNA pseudouridylate synthase AC613_21920 PF01609 Transposase DDE domain AC613_21920 PF05598 Transposase domain (DUF772) AC613_21935 PF00872 Transposase, Mutator family AC613_21955 PF13538 UvrD-like helicase C-terminal domain AC613_21960 PF13361 UvrD-like helicase C-terminal domain AC613_21960 PF00580 UvrD/REP helicase N-terminal domain AC613_21960 PF12705 PD-(D/E)XK nuclease superfamily AC613_21965 PF17946 RecC C-terminal domain AC613_22000 PF00005 ABC transporter AC613_22005 PF02405 Permease MlaE AC613_22010 PF02470 MlaD protein AC613_22015 PF05494 MlaC protein AC613_22025 PF04333 MlaA lipoprotein AC613_22035 PF00255 Glutathione peroxidase AC613_22045 PF02646 RmuC family AC613_22060 PF00043 Glutathione S-transferase, C-terminal domain AC613_22060 PF13417 Glutathione S-transferase, N-terminal domain AC613_22105 PF00239 Resolvase, N terminal domain AC613_22105 PF02796 Helix-turn-helix domain of resolvase AC613_22110 PF04221 RelB antitoxin AC613_22115 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ AC613_22165 PF07057 DNA helicase TraI AC613_22165 PF18272 single-stranded DNA binding TraI N-terminal subdomain AC613_22165 PF18340 DNA relaxase TraI 2B/2B-like domain AC613_22165 PF08751 TrwC relaxase AC613_22170 PF00672 HAMP domain AC613_22170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC613_22170 PF02203 Tar ligand binding domain homologue AC613_22200 PF02796 Helix-turn-helix domain of resolvase AC613_22200 PF00239 Resolvase, N terminal domain AC613_22235 PF13614 AAA domain AC613_22260 PF17678 Glycosyl hydrolase family 92 N-terminal domain AC613_22260 PF07971 Glycosyl hydrolase family 92 AC613_22265 PF10947 Protein of unknown function (DUF2628) AC613_22280 PF02595 Glycerate kinase family AC613_22285 PF07690 Major Facilitator Superfamily AC613_22300 PF17785 PUA-like domain AC613_22300 PF10672 S-adenosylmethionine-dependent methyltransferase AC613_22305 PF03741 Integral membrane protein TerC family AC613_22310 PF01694 Rhomboid family AC613_22315 PF03009 Glycerophosphoryl diester phosphodiesterase family AC613_22325 PF01569 PAP2 superfamily AC613_22330 PF12631 MnmE helical domain AC613_22330 PF10396 GTP-binding protein TrmE N-terminus AC613_22330 PF01926 50S ribosome-binding GTPase AC613_22340 PF14849 YidC periplasmic domain AC613_22340 PF02096 60Kd inner membrane protein AC613_22345 PF00825 Ribonuclease P AC613_22350 PF00468 Ribosomal protein L34 AC613_22365 PF06067 Domain of unknown function (DUF932) AC613_22385 PF18495 Antitoxin VbhA AC613_22405 PF00872 Transposase, Mutator family AC613_22410 PF00872 Transposase, Mutator family AC613_22450 PF00872 Transposase, Mutator family AC613_22455 PF00239 Resolvase, N terminal domain AC613_22455 PF02796 Helix-turn-helix domain of resolvase AC613_22460 PF01555 DNA methylase AC613_22465 PF09571 XcyI restriction endonuclease AC613_22500 PF01527 Transposase AC613_22510 PF13406 Transglycosylase SLT domain AC613_22525 PF00872 Transposase, Mutator family AC613_22545 PF11740 Plasmid replication region DNA-binding N-term AC613_22560 PF01527 Transposase AC613_22575 PF03377 TAL effector repeat AC613_22600 PF00156 Phosphoribosyl transferase domain