locus-tag class description AC612_00005 PF00308 Bacterial dnaA protein AC612_00005 PF11638 DnaA N-terminal domain AC612_00005 PF08299 Bacterial dnaA protein helix-turn-helix AC612_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain AC612_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain AC612_00010 PF02767 DNA polymerase III beta subunit, central domain AC612_00015 PF02463 RecF/RecN/SMC N terminal domain AC612_00020 PF00204 DNA gyrase B AC612_00020 PF00986 DNA gyrase B subunit, carboxyl terminus AC612_00020 PF18053 DNA gyrase B subunit insert domain AC612_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_00020 PF01751 Toprim domain AC612_00030 PF01435 Peptidase family M48 AC612_00040 PF03544 Gram-negative bacterial TonB protein C-terminal AC612_00045 PF01618 MotA/TolQ/ExbB proton channel family AC612_00050 PF02472 Biopolymer transport protein ExbD/TolR AC612_00055 PF02472 Biopolymer transport protein ExbD/TolR AC612_00065 PF02472 Biopolymer transport protein ExbD/TolR AC612_00070 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AC612_00080 PF13396 Phospholipase_D-nuclease N-terminal AC612_00080 PF13091 PLD-like domain AC612_00095 PF04055 Radical SAM superfamily AC612_00105 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AC612_00120 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AC612_00120 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AC612_00125 PF03572 Peptidase family S41 AC612_00125 PF13180 PDZ domain AC612_00130 PF01551 Peptidase family M23 AC612_00140 PF04389 Peptidase family M28 AC612_00150 PF00150 Cellulase (glycosyl hydrolase family 5) AC612_00155 PF00150 Cellulase (glycosyl hydrolase family 5) AC612_00160 PF00150 Cellulase (glycosyl hydrolase family 5) AC612_00165 PF00107 Zinc-binding dehydrogenase AC612_00165 PF08240 Alcohol dehydrogenase GroES-like domain AC612_00170 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC612_00170 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AC612_00175 PF01493 GXGXG motif AC612_00175 PF00310 Glutamine amidotransferases class-II AC612_00175 PF01645 Conserved region in glutamate synthase AC612_00175 PF04898 Glutamate synthase central domain AC612_00255 PF09369 Domain of unknown function (DUF1998) AC612_00255 PF00271 Helicase conserved C-terminal domain AC612_00255 PF00270 DEAD/DEAH box helicase AC612_00260 PF03006 Haemolysin-III related AC612_00275 PF00106 short chain dehydrogenase AC612_00285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC612_00285 PF03466 LysR substrate binding domain AC612_00300 PF02525 Flavodoxin-like fold AC612_00305 PF01527 Transposase AC612_00315 PF05598 Transposase domain (DUF772) AC612_00315 PF01609 Transposase DDE domain AC612_00320 PF01609 Transposase DDE domain AC612_00320 PF05598 Transposase domain (DUF772) AC612_00350 PF03781 Sulfatase-modifying factor enzyme 1 AC612_00350 PF12867 DinB superfamily AC612_00360 PF00528 Binding-protein-dependent transport system inner membrane component AC612_00365 PF00005 ABC transporter AC612_00365 PF00571 CBS domain AC612_00380 PF00005 ABC transporter AC612_00390 PF01734 Patatin-like phospholipase AC612_00395 PF00593 TonB dependent receptor AC612_00395 PF07660 Secretin and TonB N terminus short domain AC612_00395 PF07715 TonB-dependent Receptor Plug Domain AC612_00400 PF01037 Lrp/AsnC ligand binding domain AC612_00405 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AC612_00415 PF00657 GDSL-like Lipase/Acylhydrolase AC612_00430 PF04962 KduI/IolB family AC612_00435 PF00356 Bacterial regulatory proteins, lacI family AC612_00440 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AC612_00440 PF04616 Glycosyl hydrolases family 43 AC612_00445 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AC612_00455 PF03480 Bacterial extracellular solute-binding protein, family 7 AC612_00465 PF07859 alpha/beta hydrolase fold AC612_00465 PF13472 GDSL-like Lipase/Acylhydrolase family AC612_00470 PF00135 Carboxylesterase family AC612_00475 PF00248 Aldo/keto reductase family AC612_00485 PF02806 Alpha amylase, C-terminal all-beta domain AC612_00485 PF00128 Alpha amylase, catalytic domain AC612_00485 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AC612_00490 PF16657 Maltogenic Amylase, C-terminal domain AC612_00490 PF00128 Alpha amylase, catalytic domain AC612_00495 PF11896 Domain of unknown function (DUF3416) AC612_00495 PF00128 Alpha amylase, catalytic domain AC612_00510 PF05598 Transposase domain (DUF772) AC612_00510 PF01609 Transposase DDE domain AC612_00535 PF00872 Transposase, Mutator family AC612_00540 PF05598 Transposase domain (DUF772) AC612_00540 PF01609 Transposase DDE domain AC612_00550 PF00872 Transposase, Mutator family AC612_00565 PF00294 pfkB family carbohydrate kinase AC612_00575 PF12241 Trans-2-enoyl-CoA reductase catalytic region AC612_00575 PF07055 Enoyl reductase FAD binding domain AC612_00575 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AC612_00580 PF18500 CadC C-terminal domain 1 AC612_00580 PF00486 Transcriptional regulatory protein, C terminal AC612_00600 PF00196 Bacterial regulatory proteins, luxR family AC612_00600 PF00072 Response regulator receiver domain AC612_00605 PF07730 Histidine kinase AC612_00610 PF00144 Beta-lactamase AC612_00615 PF01070 FMN-dependent dehydrogenase AC612_00620 PF02735 Ku70/Ku80 beta-barrel domain AC612_00640 PF00171 Aldehyde dehydrogenase family AC612_00650 PF05598 Transposase domain (DUF772) AC612_00650 PF01609 Transposase DDE domain AC612_00660 PF07715 TonB-dependent Receptor Plug Domain AC612_00660 PF00593 TonB dependent receptor AC612_00665 PF00155 Aminotransferase class I and II AC612_00670 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AC612_00700 PF07726 ATPase family associated with various cellular activities (AAA) AC612_00700 PF17863 AAA lid domain AC612_00740 PF08946 Osmosensory transporter coiled coil AC612_00740 PF00083 Sugar (and other) transporter AC612_00745 PF00085 Thioredoxin AC612_00760 PF13344 Haloacid dehalogenase-like hydrolase AC612_00760 PF00293 NUDIX domain AC612_00765 PF05598 Transposase domain (DUF772) AC612_00765 PF01609 Transposase DDE domain AC612_00800 PF05532 CsbD-like AC612_00810 PF05598 Transposase domain (DUF772) AC612_00810 PF01609 Transposase DDE domain AC612_00825 PF01883 Iron-sulfur cluster assembly protein AC612_00825 PF10609 NUBPL iron-transfer P-loop NTPase AC612_00840 PF13091 PLD-like domain AC612_00845 PF03061 Thioesterase superfamily AC612_00875 PF08240 Alcohol dehydrogenase GroES-like domain AC612_00875 PF00107 Zinc-binding dehydrogenase AC612_00885 PF02673 Bacitracin resistance protein BacA AC612_00890 PF03951 Glutamine synthetase, beta-Grasp domain AC612_00890 PF00120 Glutamine synthetase, catalytic domain AC612_00895 PF00543 Nitrogen regulatory protein P-II AC612_00900 PF00909 Ammonium Transporter Family AC612_00905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_00905 PF00989 PAS fold AC612_00905 PF00512 His Kinase A (phospho-acceptor) domain AC612_00910 PF00158 Sigma-54 interaction domain AC612_00910 PF02954 Bacterial regulatory protein, Fis family AC612_00910 PF00072 Response regulator receiver domain AC612_00915 PF00080 Copper/zinc superoxide dismutase (SODC) AC612_00920 PF00080 Copper/zinc superoxide dismutase (SODC) AC612_00930 PF05598 Transposase domain (DUF772) AC612_00930 PF01609 Transposase DDE domain AC612_00940 PF02803 Thiolase, C-terminal domain AC612_00940 PF00108 Thiolase, N-terminal domain AC612_00975 PF00581 Rhodanese-like domain AC612_00980 PF02556 Preprotein translocase subunit SecB AC612_00985 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AC612_00985 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AC612_00995 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AC612_00995 PF00205 Thiamine pyrophosphate enzyme, central domain AC612_00995 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AC612_01000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_01005 PF02954 Bacterial regulatory protein, Fis family AC612_01005 PF00158 Sigma-54 interaction domain AC612_01005 PF00072 Response regulator receiver domain AC612_01020 PF07690 Major Facilitator Superfamily AC612_01025 PF00588 SpoU rRNA Methylase family AC612_01040 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AC612_01040 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AC612_01050 PF00561 alpha/beta hydrolase fold AC612_01055 PF03692 Putative zinc- or iron-chelating domain AC612_01060 PF00501 AMP-binding enzyme AC612_01065 PF00486 Transcriptional regulatory protein, C terminal AC612_01065 PF00072 Response regulator receiver domain AC612_01070 PF00144 Beta-lactamase AC612_01075 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family AC612_01100 PF03109 ABC1 family AC612_01110 PF00849 RNA pseudouridylate synthase AC612_01120 PF00472 RF-1 domain AC612_01130 PF01112 Asparaginase AC612_01135 PF01432 Peptidase family M3 AC612_01140 PF12706 Beta-lactamase superfamily domain AC612_01160 PF12833 Helix-turn-helix domain AC612_01165 PF00999 Sodium/hydrogen exchanger family AC612_01170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC612_01170 PF03466 LysR substrate binding domain AC612_01175 PF01274 Malate synthase AC612_01180 PF00463 Isocitrate lyase family AC612_01185 PF00990 Diguanylate cyclase, GGDEF domain AC612_01200 PF05598 Transposase domain (DUF772) AC612_01200 PF01609 Transposase DDE domain AC612_01225 PF00326 Prolyl oligopeptidase family AC612_01230 PF00364 Biotin-requiring enzyme AC612_01230 PF00289 Biotin carboxylase, N-terminal domain AC612_01230 PF02785 Biotin carboxylase C-terminal domain AC612_01230 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AC612_01235 PF01039 Carboxyl transferase domain AC612_01240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC612_01240 PF02770 Acyl-CoA dehydrogenase, middle domain AC612_01240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC612_01295 PF02492 CobW/HypB/UreG, nucleotide-binding domain AC612_01295 PF07683 Cobalamin synthesis protein cobW C-terminal domain AC612_01320 PF03969 AFG1-like ATPase AC612_01325 PF01047 MarR family AC612_01330 PF02566 OsmC-like protein AC612_01360 PF16884 N-terminal domain of oxidoreductase AC612_01360 PF00107 Zinc-binding dehydrogenase AC612_01375 PF00849 RNA pseudouridylate synthase AC612_01380 PF00593 TonB dependent receptor AC612_01390 PF00270 DEAD/DEAH box helicase AC612_01390 PF04408 Helicase associated domain (HA2) AC612_01390 PF00271 Helicase conserved C-terminal domain AC612_01390 PF08482 ATP-dependent helicase C-terminal AC612_01395 PF07308 Protein of unknown function (DUF1456) AC612_01400 PF00576 HIUase/Transthyretin family AC612_01405 PF13454 FAD-NAD(P)-binding AC612_01410 PF01014 Uricase AC612_01410 PF09349 OHCU decarboxylase AC612_01425 PF00266 Aminotransferase class-V AC612_01430 PF01546 Peptidase family M20/M25/M40 AC612_01430 PF07687 Peptidase dimerisation domain AC612_01435 PF03466 LysR substrate binding domain AC612_01435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC612_01440 PF00561 alpha/beta hydrolase fold AC612_01455 PF01425 Amidase AC612_01460 PF01156 Inosine-uridine preferring nucleoside hydrolase AC612_01470 PF00860 Permease family AC612_01480 PF00111 2Fe-2S iron-sulfur cluster binding domain AC612_01485 PF00355 Rieske [2Fe-2S] domain AC612_01490 PF03466 LysR substrate binding domain AC612_01490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC612_01510 PF03466 LysR substrate binding domain AC612_01510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC612_01515 PF07690 Major Facilitator Superfamily AC612_01525 PF08386 TAP-like protein AC612_01525 PF00561 alpha/beta hydrolase fold AC612_01530 PF02146 Sir2 family AC612_01535 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AC612_01540 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AC612_01540 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AC612_01550 PF00551 Formyl transferase AC612_01555 PF00486 Transcriptional regulatory protein, C terminal AC612_01555 PF00072 Response regulator receiver domain AC612_01560 PF00512 His Kinase A (phospho-acceptor) domain AC612_01560 PF00672 HAMP domain AC612_01560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_01565 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC612_01565 PF00529 HlyD membrane-fusion protein of T1SS AC612_01570 PF00873 AcrB/AcrD/AcrF family AC612_01575 PF08139 Prokaryotic membrane lipoprotein lipid attachment site AC612_01575 PF02321 Outer membrane efflux protein AC612_01585 PF02219 Methylenetetrahydrofolate reductase AC612_01590 PF02677 Epoxyqueuosine reductase QueH AC612_01595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC612_01595 PF03466 LysR substrate binding domain AC612_01600 PF03358 NADPH-dependent FMN reductase AC612_01610 PF01717 Cobalamin-independent synthase, Catalytic domain AC612_01610 PF08267 Cobalamin-independent synthase, N-terminal domain AC612_01615 PF03812 2-keto-3-deoxygluconate permease AC612_01630 PF05368 NmrA-like family AC612_01635 PF01638 HxlR-like helix-turn-helix AC612_01655 PF05598 Transposase domain (DUF772) AC612_01655 PF01609 Transposase DDE domain AC612_01680 PF00872 Transposase, Mutator family AC612_01705 PF05598 Transposase domain (DUF772) AC612_01705 PF01609 Transposase DDE domain AC612_01715 PF00920 Dehydratase family AC612_01735 PF00132 Bacterial transferase hexapeptide (six repeats) AC612_01745 PF07690 Major Facilitator Superfamily AC612_01750 PF01966 HD domain AC612_01750 PF11871 Domain of unknown function (DUF3391) AC612_01780 PF01494 FAD binding domain AC612_01790 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AC612_01790 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AC612_01795 PF00230 Major intrinsic protein AC612_01800 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AC612_01800 PF01266 FAD dependent oxidoreductase AC612_01805 PF08220 DeoR-like helix-turn-helix domain AC612_01805 PF00455 DeoR C terminal sensor domain AC612_01815 PF00355 Rieske [2Fe-2S] domain AC612_01820 PF01144 Coenzyme A transferase AC612_01825 PF01144 Coenzyme A transferase AC612_01830 PF02803 Thiolase, C-terminal domain AC612_01830 PF00108 Thiolase, N-terminal domain AC612_01835 PF00775 Dioxygenase AC612_01835 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AC612_01845 PF00206 Lyase AC612_01845 PF10397 Adenylosuccinate lyase C-terminus AC612_01850 PF12146 Serine aminopeptidase, S33 AC612_01855 PF02627 Carboxymuconolactone decarboxylase family AC612_01865 PF01614 Bacterial transcriptional regulator AC612_01865 PF09339 IclR helix-turn-helix domain AC612_01875 PF07859 alpha/beta hydrolase fold AC612_01880 PF10677 Protein of unknown function (DUF2490) AC612_01885 PF01134 Glucose inhibited division protein A AC612_01885 PF13932 GidA associated domain AC612_01895 PF00291 Pyridoxal-phosphate dependent enzyme AC612_01915 PF13649 Methyltransferase domain AC612_01930 PF12697 Alpha/beta hydrolase family AC612_01940 PF00155 Aminotransferase class I and II AC612_01945 PF04055 Radical SAM superfamily AC612_01945 PF06968 Biotin and Thiamin Synthesis associated domain AC612_01955 PF01040 UbiA prenyltransferase family AC612_01975 PF05819 NolX protein AC612_01980 PF01609 Transposase DDE domain AC612_01980 PF05598 Transposase domain (DUF772) AC612_02020 PF01313 Bacterial export proteins, family 3 AC612_02025 PF00813 FliP family AC612_02040 PF00771 FHIPEP family AC612_02045 PF01312 FlhB HrpN YscU SpaS Family AC612_02060 PF01514 Secretory protein of YscJ/FliF family AC612_02075 PF18269 T3SS EscN ATPase C-terminal domain AC612_02075 PF02874 ATP synthase alpha/beta family, beta-barrel domain AC612_02075 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AC612_02085 PF01311 Bacterial export proteins, family 1 AC612_02100 PF01464 Transglycosylase SLT domain AC612_02115 PF12794 Mechanosensitive ion channel inner membrane domain 1 AC612_02115 PF12795 Mechanosensitive ion channel porin domain AC612_02115 PF00924 Mechanosensitive ion channel AC612_02120 PF00884 Sulfatase AC612_02125 PF03109 ABC1 family AC612_02135 PF05661 Protein of unknown function (DUF808) AC612_02140 PF00990 Diguanylate cyclase, GGDEF domain AC612_02140 PF00072 Response regulator receiver domain AC612_02145 PF08323 Starch synthase catalytic domain AC612_02145 PF00534 Glycosyl transferases group 1 AC612_02150 PF00128 Alpha amylase, catalytic domain AC612_02150 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AC612_02150 PF02806 Alpha amylase, C-terminal all-beta domain AC612_02155 PF11941 Domain of unknown function (DUF3459) AC612_02155 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AC612_02155 PF00128 Alpha amylase, catalytic domain AC612_02160 PF02446 4-alpha-glucanotransferase AC612_02165 PF00128 Alpha amylase, catalytic domain AC612_02175 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AC612_02175 PF00128 Alpha amylase, catalytic domain AC612_02180 PF13460 NAD(P)H-binding AC612_02200 PF06903 VirK protein AC612_02205 PF02321 Outer membrane efflux protein AC612_02220 PF00873 AcrB/AcrD/AcrF family AC612_02235 PF00271 Helicase conserved C-terminal domain AC612_02235 PF00270 DEAD/DEAH box helicase AC612_02240 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AC612_02240 PF00364 Biotin-requiring enzyme AC612_02240 PF02817 e3 binding domain AC612_02250 PF02779 Transketolase, pyrimidine binding domain AC612_02250 PF02780 Transketolase, C-terminal domain AC612_02255 PF00676 Dehydrogenase E1 component AC612_02265 PF03301 Tryptophan 2,3-dioxygenase AC612_02270 PF00854 POT family AC612_02280 PF01047 MarR family AC612_02285 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AC612_02305 PF03334 Na+/H+ antiporter subunit AC612_02310 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AC612_02320 PF00361 Proton-conducting membrane transporter AC612_02325 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AC612_02330 PF13244 Domain of unknown function (DUF4040) AC612_02330 PF00361 Proton-conducting membrane transporter AC612_02330 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AC612_02330 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AC612_02345 PF01447 Thermolysin metallopeptidase, catalytic domain AC612_02345 PF07504 Fungalysin/Thermolysin Propeptide Motif AC612_02345 PF01483 Proprotein convertase P-domain AC612_02345 PF02868 Thermolysin metallopeptidase, alpha-helical domain AC612_02355 PF01259 SAICAR synthetase AC612_02360 PF00226 DnaJ domain AC612_02360 PF05099 Tellurite resistance protein TerB AC612_02370 PF00834 Ribulose-phosphate 3 epimerase family AC612_02375 PF00583 Acetyltransferase (GNAT) family AC612_02380 PF00781 Diacylglycerol kinase catalytic domain AC612_02385 PF00425 chorismate binding enzyme AC612_02385 PF04715 Anthranilate synthase component I, N terminal region AC612_02400 PF05598 Transposase domain (DUF772) AC612_02400 PF01609 Transposase DDE domain AC612_02405 PF05598 Transposase domain (DUF772) AC612_02405 PF01609 Transposase DDE domain AC612_02410 PF05598 Transposase domain (DUF772) AC612_02410 PF01609 Transposase DDE domain AC612_02420 PF01609 Transposase DDE domain AC612_02420 PF05598 Transposase domain (DUF772) AC612_02430 PF00117 Glutamine amidotransferase class-I AC612_02440 PF00591 Glycosyl transferase family, a/b domain AC612_02440 PF02885 Glycosyl transferase family, helical bundle domain AC612_02445 PF00218 Indole-3-glycerol phosphate synthase AC612_02455 PF00027 Cyclic nucleotide-binding domain AC612_02455 PF00325 Bacterial regulatory proteins, crp family AC612_02460 PF02675 S-adenosylmethionine decarboxylase AC612_02465 PF00893 Small Multidrug Resistance protein AC612_02470 PF03232 Ubiquinone biosynthesis protein COQ7 AC612_02475 PF00572 Ribosomal protein L13 AC612_02480 PF00380 Ribosomal protein S9/S16 AC612_02495 PF00293 NUDIX domain AC612_02505 PF00210 Ferritin-like domain AC612_02510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_02510 PF00672 HAMP domain AC612_02510 PF00512 His Kinase A (phospho-acceptor) domain AC612_02510 PF01627 Hpt domain AC612_02510 PF00072 Response regulator receiver domain AC612_02510 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AC612_02515 PF00072 Response regulator receiver domain AC612_02515 PF00486 Transcriptional regulatory protein, C terminal AC612_02535 PF01521 Iron-sulphur cluster biosynthesis AC612_02545 PF00293 NUDIX domain AC612_02545 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AC612_02545 PF09297 NADH pyrophosphatase zinc ribbon domain AC612_02550 PF03186 CobD/Cbib protein AC612_02550 PF17113 Regulatory signalling modulator protein AmpE AC612_02565 PF07690 Major Facilitator Superfamily AC612_02575 PF07690 Major Facilitator Superfamily AC612_02580 PF12805 FUSC-like inner membrane protein yccS AC612_02590 PF02844 Phosphoribosylglycinamide synthetase, N domain AC612_02590 PF02843 Phosphoribosylglycinamide synthetase, C domain AC612_02590 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AC612_02600 PF01808 AICARFT/IMPCHase bienzyme AC612_02600 PF02142 MGS-like domain AC612_02605 PF01066 CDP-alcohol phosphatidyltransferase AC612_02615 PF00782 Dual specificity phosphatase, catalytic domain AC612_02645 PF02954 Bacterial regulatory protein, Fis family AC612_02660 PF01381 Helix-turn-helix AC612_02685 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AC612_02685 PF00289 Biotin carboxylase, N-terminal domain AC612_02685 PF02785 Biotin carboxylase C-terminal domain AC612_02695 PF00364 Biotin-requiring enzyme AC612_02700 PF01220 Dehydroquinase class II AC612_02705 PF11412 Disulphide bond corrector protein DsbC AC612_02705 PF02683 Cytochrome C biogenesis protein transmembrane region AC612_02710 PF03091 CutA1 divalent ion tolerance protein AC612_02715 PF04231 Endonuclease I AC612_02720 PF00166 Chaperonin 10 Kd subunit AC612_02725 PF00118 TCP-1/cpn60 chaperonin family AC612_02735 PF07715 TonB-dependent Receptor Plug Domain AC612_02735 PF00593 TonB dependent receptor AC612_02740 PF00793 DAHP synthetase I family AC612_02755 PF08450 SMP-30/Gluconolactonase/LRE-like region AC612_02765 PF03710 Glutamate-ammonia ligase adenylyltransferase AC612_02765 PF08335 GlnD PII-uridylyltransferase AC612_02770 PF02592 Putative vitamin uptake transporter AC612_02800 PF00881 Nitroreductase family AC612_02805 PF04264 YceI-like domain AC612_02830 PF16957 Malonate decarboxylase, alpha subunit, transporter AC612_02835 PF06857 Malonate decarboxylase delta subunit (MdcD) AC612_02840 PF01039 Carboxyl transferase domain AC612_02850 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG AC612_02855 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AC612_02860 PF00698 Acyl transferase domain AC612_02870 PF00392 Bacterial regulatory proteins, gntR family AC612_02870 PF07729 FCD domain AC612_02905 PF07745 Glycosyl hydrolase family 53 AC612_02910 PF17831 Pyruvate dehydrogenase E1 component middle domain AC612_02910 PF00456 Transketolase, thiamine diphosphate binding domain AC612_02920 PF00872 Transposase, Mutator family AC612_02935 PF05598 Transposase domain (DUF772) AC612_02935 PF01609 Transposase DDE domain AC612_02945 PF00106 short chain dehydrogenase AC612_02960 PF00106 short chain dehydrogenase AC612_02970 PF13409 Glutathione S-transferase, N-terminal domain AC612_03005 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AC612_03005 PF00326 Prolyl oligopeptidase family AC612_03010 PF07759 Protein of unknown function (DUF1615) AC612_03015 PF05230 MASE2 domain AC612_03015 PF00990 Diguanylate cyclase, GGDEF domain AC612_03035 PF00892 EamA-like transporter family AC612_03040 PF03330 Lytic transglycolase AC612_03050 PF00553 Cellulose binding domain AC612_03050 PF00041 Fibronectin type III domain AC612_03050 PF01341 Glycosyl hydrolases family 6 AC612_03065 PF00324 Amino acid permease AC612_03075 PF01544 CorA-like Mg2+ transporter protein AC612_03085 PF01204 Trehalase AC612_03095 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AC612_03095 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AC612_03115 PF00563 EAL domain AC612_03115 PF00990 Diguanylate cyclase, GGDEF domain AC612_03115 PF03707 Bacterial signalling protein N terminal repeat AC612_03120 PF02203 Tar ligand binding domain homologue AC612_03120 PF00672 HAMP domain AC612_03120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC612_03125 PF00150 Cellulase (glycosyl hydrolase family 5) AC612_03125 PF00553 Cellulose binding domain AC612_03130 PF01740 STAS domain AC612_03130 PF00916 Sulfate permease family AC612_03145 PF13632 Glycosyl transferase family group 2 AC612_03155 PF06580 Histidine kinase AC612_03155 PF07694 5TMR of 5TMR-LYT AC612_03160 PF00072 Response regulator receiver domain AC612_03160 PF04397 LytTr DNA-binding domain AC612_03165 PF03900 Porphobilinogen deaminase, C-terminal domain AC612_03165 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AC612_03190 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AC612_03190 PF00326 Prolyl oligopeptidase family AC612_03195 PF00155 Aminotransferase class I and II AC612_03200 PF00326 Prolyl oligopeptidase family AC612_03200 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AC612_03205 PF04304 Protein of unknown function (DUF454) AC612_03215 PF01678 Diaminopimelate epimerase AC612_03225 PF00589 Phage integrase family AC612_03225 PF02899 Phage integrase, N-terminal SAM-like domain AC612_03230 PF00227 Proteasome subunit AC612_03235 PF10431 C-terminal, D2-small domain, of ClpB protein AC612_03235 PF00004 ATPase family associated with various cellular activities (AAA) AC612_03235 PF07724 AAA domain (Cdc48 subfamily) AC612_03245 PF13673 Acetyltransferase (GNAT) domain AC612_03250 PF13533 Biotin-lipoyl like AC612_03260 PF01209 ubiE/COQ5 methyltransferase family AC612_03265 PF00990 Diguanylate cyclase, GGDEF domain AC612_03265 PF03707 Bacterial signalling protein N terminal repeat AC612_03265 PF00563 EAL domain AC612_03270 PF11838 ERAP1-like C-terminal domain AC612_03270 PF01433 Peptidase family M1 domain AC612_03290 PF00497 Bacterial extracellular solute-binding proteins, family 3 AC612_03305 PF00107 Zinc-binding dehydrogenase AC612_03305 PF08240 Alcohol dehydrogenase GroES-like domain AC612_03320 PF00294 pfkB family carbohydrate kinase AC612_03330 PF04085 rod shape-determining protein MreC AC612_03340 PF00905 Penicillin binding protein transpeptidase domain AC612_03340 PF03717 Penicillin-binding Protein dimerisation domain AC612_03345 PF01098 Cell cycle protein AC612_03350 PF00295 Glycosyl hydrolases family 28 AC612_03355 PF13406 Transglycosylase SLT domain AC612_03360 PF03330 Lytic transglycolase AC612_03360 PF05036 Sporulation related domain AC612_03365 PF00768 D-alanyl-D-alanine carboxypeptidase AC612_03365 PF07943 Penicillin-binding protein 5, C-terminal domain AC612_03375 PF04359 Protein of unknown function (DUF493) AC612_03380 PF03099 Biotin/lipoate A/B protein ligase family AC612_03385 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AC612_03385 PF04055 Radical SAM superfamily AC612_03390 PF11818 C-terminal domain of tail specific protease (DUF3340) AC612_03390 PF17804 Tail specific protease N-terminal domain AC612_03390 PF00595 PDZ domain AC612_03390 PF03572 Peptidase family S41 AC612_03400 PF03466 LysR substrate binding domain AC612_03400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC612_03410 PF01467 Cytidylyltransferase-like AC612_03410 PF00293 NUDIX domain AC612_03445 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AC612_03445 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AC612_03450 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AC612_03450 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AC612_03455 PF04972 BON domain AC612_03460 PF00512 His Kinase A (phospho-acceptor) domain AC612_03460 PF08446 PAS fold AC612_03460 PF00360 Phytochrome region AC612_03460 PF01590 GAF domain AC612_03460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_03465 PF00072 Response regulator receiver domain AC612_03470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_03470 PF00512 His Kinase A (phospho-acceptor) domain AC612_03475 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AC612_03520 PF00263 Bacterial type II and III secretion system protein AC612_03520 PF03958 Bacterial type II/III secretion system short domain AC612_03525 PF00437 Type II/IV secretion system protein AC612_03530 PF00482 Type II secretion system (T2SS), protein F AC612_03535 PF08334 Type II secretion system (T2SS), protein G AC612_03535 PF07963 Prokaryotic N-terminal methylation motif AC612_03540 PF07963 Prokaryotic N-terminal methylation motif AC612_03540 PF12019 Type II transport protein GspH AC612_03545 PF07963 Prokaryotic N-terminal methylation motif AC612_03545 PF02501 Type II secretion system (T2SS), protein I AC612_03550 PF07963 Prokaryotic N-terminal methylation motif AC612_03550 PF11612 Type II secretion system (T2SS), protein J AC612_03555 PF03934 Type II secretion system (T2SS), protein K AC612_03580 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 AC612_03580 PF00703 Glycosyl hydrolases family 2 AC612_03580 PF02837 Glycosyl hydrolases family 2, sugar binding domain AC612_03580 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AC612_03580 PF16355 Domain of unknown function (DUF4982) AC612_03600 PF07690 Major Facilitator Superfamily AC612_03605 PF00356 Bacterial regulatory proteins, lacI family AC612_03610 PF01380 SIS domain AC612_03615 PF01979 Amidohydrolase family AC612_03630 PF12627 Probable RNA and SrmB- binding site of polymerase A AC612_03630 PF01743 Poly A polymerase head domain AC612_03630 PF01966 HD domain AC612_03635 PF00732 GMC oxidoreductase AC612_03635 PF05199 GMC oxidoreductase AC612_03640 PF00171 Aldehyde dehydrogenase family AC612_03645 PF02028 BCCT, betaine/carnitine/choline family transporter AC612_03655 PF01323 DSBA-like thioredoxin domain AC612_03665 PF00034 Cytochrome c AC612_03670 PF01926 50S ribosome-binding GTPase AC612_03685 PF04107 Glutamate-cysteine ligase family 2(GCS2) AC612_03695 PF00672 HAMP domain AC612_03695 PF00512 His Kinase A (phospho-acceptor) domain AC612_03695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_03700 PF00486 Transcriptional regulatory protein, C terminal AC612_03700 PF00072 Response regulator receiver domain AC612_03715 PF02583 Metal-sensitive transcriptional repressor AC612_03720 PF00107 Zinc-binding dehydrogenase AC612_03720 PF08240 Alcohol dehydrogenase GroES-like domain AC612_03725 PF04828 Glutathione-dependent formaldehyde-activating enzyme AC612_03730 PF00756 Putative esterase AC612_03735 PF00155 Aminotransferase class I and II AC612_03735 PF00392 Bacterial regulatory proteins, gntR family AC612_03740 PF02567 Phenazine biosynthesis-like protein AC612_03755 PF12848 ABC transporter AC612_03755 PF00005 ABC transporter AC612_03765 PF00464 Serine hydroxymethyltransferase AC612_03770 PF03477 ATP cone domain AC612_03780 PF01872 RibD C-terminal domain AC612_03780 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AC612_03790 PF00677 Lumazine binding domain AC612_03795 PF00925 GTP cyclohydrolase II AC612_03795 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AC612_03800 PF00885 6,7-dimethyl-8-ribityllumazine synthase AC612_03805 PF01029 NusB family AC612_03810 PF00586 AIR synthase related protein, N-terminal domain AC612_03810 PF02769 AIR synthase related protein, C-terminal domain AC612_03830 PF03814 Potassium-transporting ATPase A subunit AC612_03840 PF02669 K+-transporting ATPase, c chain AC612_03845 PF13492 GAF domain AC612_03845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_03845 PF00512 His Kinase A (phospho-acceptor) domain AC612_03845 PF02702 Osmosensitive K+ channel His kinase sensor domain AC612_03845 PF13493 Domain of unknown function (DUF4118) AC612_03850 PF00072 Response regulator receiver domain AC612_03850 PF00486 Transcriptional regulatory protein, C terminal AC612_03855 PF02913 FAD linked oxidases, C-terminal domain AC612_03855 PF01565 FAD binding domain AC612_03860 PF04307 LexA-binding, inner membrane-associated putative hydrolase AC612_03865 PF02021 Uncharacterised protein family UPF0102 AC612_03875 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AC612_03885 PF02381 MraZ protein, putative antitoxin-like AC612_03890 PF01795 MraW methylase family AC612_03895 PF04999 Cell division protein FtsL AC612_03900 PF03717 Penicillin-binding Protein dimerisation domain AC612_03900 PF00905 Penicillin binding protein transpeptidase domain AC612_03905 PF08245 Mur ligase middle domain AC612_03905 PF02875 Mur ligase family, glutamate ligase domain AC612_03905 PF01225 Mur ligase family, catalytic domain AC612_03910 PF08245 Mur ligase middle domain AC612_03910 PF02875 Mur ligase family, glutamate ligase domain AC612_03910 PF01225 Mur ligase family, catalytic domain AC612_03915 PF00953 Glycosyl transferase family 4 AC612_03920 PF01098 Cell cycle protein AC612_03925 PF04101 Glycosyltransferase family 28 C-terminal domain AC612_03925 PF03033 Glycosyltransferase family 28 N-terminal domain AC612_03930 PF01225 Mur ligase family, catalytic domain AC612_03930 PF02875 Mur ligase family, glutamate ligase domain AC612_03930 PF08245 Mur ligase middle domain AC612_03935 PF07478 D-ala D-ala ligase C-terminus AC612_03935 PF01820 D-ala D-ala ligase N-terminus AC612_03940 PF03799 Cell division protein FtsQ AC612_03940 PF08478 POTRA domain, FtsQ-type AC612_03945 PF02491 SHS2 domain inserted in FTSA AC612_03950 PF12327 FtsZ family, C-terminal domain AC612_03950 PF00091 Tubulin/FtsZ family, GTPase domain AC612_03955 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AC612_03965 PF01476 LysM domain AC612_03965 PF08525 Opacity-associated protein A N-terminal motif AC612_03965 PF01551 Peptidase family M23 AC612_03970 PF01043 SecA preprotein cross-linking domain AC612_03970 PF07516 SecA Wing and Scaffold domain AC612_03970 PF02810 SEC-C motif AC612_03970 PF07517 SecA DEAD-like domain AC612_03975 PF00293 NUDIX domain AC612_03985 PF02219 Methylenetetrahydrofolate reductase AC612_03995 PF00550 Phosphopantetheine attachment site AC612_03995 PF00107 Zinc-binding dehydrogenase AC612_03995 PF08240 Alcohol dehydrogenase GroES-like domain AC612_03995 PF00698 Acyl transferase domain AC612_03995 PF02801 Beta-ketoacyl synthase, C-terminal domain AC612_03995 PF08659 KR domain AC612_03995 PF00109 Beta-ketoacyl synthase, N-terminal domain AC612_03995 PF16197 Ketoacyl-synthetase C-terminal extension AC612_03995 PF14765 Polyketide synthase dehydratase AC612_04000 PF00082 Subtilase family AC612_04000 PF09286 Pro-kumamolisin, activation domain AC612_04010 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AC612_04015 PF00128 Alpha amylase, catalytic domain AC612_04040 PF00685 Sulfotransferase domain AC612_04050 PF13649 Methyltransferase domain AC612_04055 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AC612_04055 PF05221 S-adenosyl-L-homocysteine hydrolase AC612_04065 PF00311 Phosphoenolpyruvate carboxylase AC612_04085 PF01389 OmpA-like transmembrane domain AC612_04085 PF00691 OmpA family AC612_04100 PF00328 Histidine phosphatase superfamily (branch 2) AC612_04105 PF02772 S-adenosylmethionine synthetase, central domain AC612_04105 PF02773 S-adenosylmethionine synthetase, C-terminal domain AC612_04105 PF00438 S-adenosylmethionine synthetase, N-terminal domain AC612_04115 PF13649 Methyltransferase domain AC612_04120 PF01207 Dihydrouridine synthase (Dus) AC612_04130 PF00294 pfkB family carbohydrate kinase AC612_04135 PF01773 Na+ dependent nucleoside transporter N-terminus AC612_04135 PF07662 Na+ dependent nucleoside transporter C-terminus AC612_04135 PF07670 Nucleoside recognition AC612_04145 PF00248 Aldo/keto reductase family AC612_04155 PF00593 TonB dependent receptor AC612_04155 PF07715 TonB-dependent Receptor Plug Domain AC612_04175 PF00528 Binding-protein-dependent transport system inner membrane component AC612_04180 PF00005 ABC transporter AC612_04190 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AC612_04200 PF00005 ABC transporter AC612_04205 PF13472 GDSL-like Lipase/Acylhydrolase family AC612_04210 PF00486 Transcriptional regulatory protein, C terminal AC612_04210 PF00072 Response regulator receiver domain AC612_04215 PF08521 Two-component sensor kinase N-terminal AC612_04215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_04215 PF00512 His Kinase A (phospho-acceptor) domain AC612_04225 PF01219 Prokaryotic diacylglycerol kinase AC612_04245 PF01790 Prolipoprotein diacylglyceryl transferase AC612_04250 PF00303 Thymidylate synthase AC612_04260 PF00186 Dihydrofolate reductase AC612_04265 PF00158 Sigma-54 interaction domain AC612_04270 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AC612_04270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC612_04275 PF00005 ABC transporter AC612_04280 PF00528 Binding-protein-dependent transport system inner membrane component AC612_04290 PF00296 Luciferase-like monooxygenase AC612_04295 PF03358 NADPH-dependent FMN reductase AC612_04315 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AC612_04320 PF00528 Binding-protein-dependent transport system inner membrane component AC612_04330 PF00005 ABC transporter AC612_04330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AC612_04335 PF00149 Calcineurin-like phosphoesterase AC612_04340 PF04379 ApaG domain AC612_04345 PF00398 Ribosomal RNA adenine dimethylase AC612_04350 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AC612_04355 PF00639 PPIC-type PPIASE domain AC612_04355 PF09312 SurA N-terminal domain AC612_04360 PF03968 OstA-like protein AC612_04360 PF04453 LPS transport system D AC612_04375 PF00850 Histone deacetylase domain AC612_04380 PF01923 Cobalamin adenosyltransferase AC612_04390 PF01494 FAD binding domain AC612_04395 PF01494 FAD binding domain AC612_04415 PF07729 FCD domain AC612_04415 PF00392 Bacterial regulatory proteins, gntR family AC612_04420 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AC612_04425 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AC612_04425 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit AC612_04430 PF03466 LysR substrate binding domain AC612_04430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC612_04440 PF00171 Aldehyde dehydrogenase family AC612_04445 PF00378 Enoyl-CoA hydratase/isomerase AC612_04470 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AC612_04470 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AC612_04475 PF01728 FtsJ-like methyltransferase AC612_04475 PF18125 RlmM ferredoxin-like domain AC612_04500 PF00892 EamA-like transporter family AC612_04510 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AC612_04510 PF00749 tRNA synthetases class I (E and Q), catalytic domain AC612_04525 PF00990 Diguanylate cyclase, GGDEF domain AC612_04525 PF00072 Response regulator receiver domain AC612_04530 PF00672 HAMP domain AC612_04530 PF17149 Periplasmic sensor domain found in signal transduction proteins AC612_04530 PF00072 Response regulator receiver domain AC612_04530 PF01627 Hpt domain AC612_04530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_04530 PF00512 His Kinase A (phospho-acceptor) domain AC612_04535 PF00072 Response regulator receiver domain AC612_04535 PF00196 Bacterial regulatory proteins, luxR family AC612_04545 PF01625 Peptide methionine sulfoxide reductase AC612_04555 PF00923 Transaldolase/Fructose-6-phosphate aldolase AC612_04560 PF14760 Rnk N-terminus AC612_04560 PF01272 Transcription elongation factor, GreA/GreB, C-term AC612_04565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC612_04565 PF03466 LysR substrate binding domain AC612_04570 PF13192 Thioredoxin domain AC612_04570 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC612_04575 PF10417 C-terminal domain of 1-Cys peroxiredoxin AC612_04575 PF00578 AhpC/TSA family AC612_04580 PF17827 PrmC N-terminal domain AC612_04580 PF05175 Methyltransferase small domain AC612_04585 PF00561 alpha/beta hydrolase fold AC612_04595 PF00293 NUDIX domain AC612_04600 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AC612_04600 PF01612 3'-5' exonuclease AC612_04600 PF01367 5'-3' exonuclease, C-terminal SAM fold AC612_04600 PF00476 DNA polymerase family A AC612_04620 PF01609 Transposase DDE domain AC612_04620 PF05598 Transposase domain (DUF772) AC612_04635 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AC612_04635 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AC612_04635 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AC612_04655 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AC612_04660 PF02233 NAD(P) transhydrogenase beta subunit AC612_04675 PF01063 Amino-transferase class IV AC612_04680 PF00082 Subtilase family AC612_04680 PF04151 Bacterial pre-peptidase C-terminal domain AC612_04685 PF00082 Subtilase family AC612_04685 PF04151 Bacterial pre-peptidase C-terminal domain AC612_04690 PF00082 Subtilase family AC612_04690 PF04151 Bacterial pre-peptidase C-terminal domain AC612_04695 PF04073 Aminoacyl-tRNA editing domain AC612_04715 PF03358 NADPH-dependent FMN reductase AC612_04720 PF03631 Virulence factor BrkB AC612_04725 PF08534 Redoxin AC612_04730 PF00708 Acylphosphatase AC612_04740 PF03976 Polyphosphate kinase 2 (PPK2) AC612_04745 PF00994 Probable molybdopterin binding domain AC612_04755 PF03462 PCRF domain AC612_04755 PF00472 RF-1 domain AC612_04760 PF01488 Shikimate / quinate 5-dehydrogenase AC612_04760 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AC612_04760 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AC612_04770 PF03550 Outer membrane lipoprotein LolB AC612_04775 PF08544 GHMP kinases C terminal AC612_04775 PF00288 GHMP kinases N terminal domain AC612_04785 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AC612_04785 PF14572 Phosphoribosyl synthetase-associated domain AC612_04790 PF01386 Ribosomal L25p family AC612_04790 PF14693 Ribosomal protein TL5, C-terminal domain AC612_04795 PF01195 Peptidyl-tRNA hydrolase AC612_04800 PF06071 Protein of unknown function (DUF933) AC612_04800 PF01926 50S ribosome-binding GTPase AC612_04820 PF00009 Elongation factor Tu GTP binding domain AC612_04820 PF03143 Elongation factor Tu C-terminal domain AC612_04820 PF03144 Elongation factor Tu domain 2 AC612_04830 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AC612_04835 PF00467 KOW motif AC612_04835 PF02357 Transcription termination factor nusG AC612_04840 PF03946 Ribosomal protein L11, N-terminal domain AC612_04840 PF00298 Ribosomal protein L11, RNA binding domain AC612_04845 PF00687 Ribosomal protein L1p/L10e family AC612_04850 PF00466 Ribosomal protein L10 AC612_04855 PF16320 Ribosomal protein L7/L12 dimerisation domain AC612_04855 PF00542 Ribosomal protein L7/L12 C-terminal domain AC612_04860 PF04565 RNA polymerase Rpb2, domain 3 AC612_04860 PF04561 RNA polymerase Rpb2, domain 2 AC612_04860 PF00562 RNA polymerase Rpb2, domain 6 AC612_04860 PF10385 RNA polymerase beta subunit external 1 domain AC612_04860 PF04563 RNA polymerase beta subunit AC612_04860 PF04560 RNA polymerase Rpb2, domain 7 AC612_04865 PF04983 RNA polymerase Rpb1, domain 3 AC612_04865 PF04997 RNA polymerase Rpb1, domain 1 AC612_04865 PF00623 RNA polymerase Rpb1, domain 2 AC612_04865 PF05000 RNA polymerase Rpb1, domain 4 AC612_04865 PF04998 RNA polymerase Rpb1, domain 5 AC612_04870 PF00164 Ribosomal protein S12/S23 AC612_04875 PF00177 Ribosomal protein S7p/S5e AC612_04880 PF00679 Elongation factor G C-terminus AC612_04880 PF03144 Elongation factor Tu domain 2 AC612_04880 PF14492 Elongation Factor G, domain II AC612_04880 PF03764 Elongation factor G, domain IV AC612_04880 PF00009 Elongation factor Tu GTP binding domain AC612_04885 PF00009 Elongation factor Tu GTP binding domain AC612_04885 PF03143 Elongation factor Tu C-terminal domain AC612_04885 PF03144 Elongation factor Tu domain 2 AC612_04890 PF00338 Ribosomal protein S10p/S20e AC612_04895 PF00297 Ribosomal protein L3 AC612_04900 PF00573 Ribosomal protein L4/L1 family AC612_04905 PF00276 Ribosomal protein L23 AC612_04910 PF03947 Ribosomal Proteins L2, C-terminal domain AC612_04910 PF00181 Ribosomal Proteins L2, RNA binding domain AC612_04915 PF00203 Ribosomal protein S19 AC612_04920 PF00237 Ribosomal protein L22p/L17e AC612_04925 PF00189 Ribosomal protein S3, C-terminal domain AC612_04925 PF07650 KH domain AC612_04930 PF00252 Ribosomal protein L16p/L10e AC612_04935 PF00831 Ribosomal L29 protein AC612_04940 PF00366 Ribosomal protein S17 AC612_04945 PF00238 Ribosomal protein L14p/L23e AC612_04950 PF00467 KOW motif AC612_04950 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AC612_04955 PF00281 Ribosomal protein L5 AC612_04955 PF00673 ribosomal L5P family C-terminus AC612_04960 PF00253 Ribosomal protein S14p/S29e AC612_04965 PF00410 Ribosomal protein S8 AC612_04970 PF00347 Ribosomal protein L6 AC612_04975 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AC612_04980 PF03719 Ribosomal protein S5, C-terminal domain AC612_04980 PF00333 Ribosomal protein S5, N-terminal domain AC612_04985 PF00327 Ribosomal protein L30p/L7e AC612_04990 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AC612_04995 PF00344 SecY translocase AC612_05000 PF00416 Ribosomal protein S13/S18 AC612_05005 PF00411 Ribosomal protein S11 AC612_05010 PF01479 S4 domain AC612_05010 PF00163 Ribosomal protein S4/S9 N-terminal domain AC612_05015 PF01000 RNA polymerase Rpb3/RpoA insert domain AC612_05015 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AC612_05015 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AC612_05020 PF01196 Ribosomal protein L17 AC612_05025 PF02600 Disulfide bond formation protein DsbB AC612_05040 PF01474 Class-II DAHP synthetase family AC612_05050 PF01425 Amidase AC612_05065 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AC612_05070 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AC612_05070 PF00056 lactate/malate dehydrogenase, NAD binding domain AC612_05075 PF02798 Glutathione S-transferase, N-terminal domain AC612_05075 PF00043 Glutathione S-transferase, C-terminal domain AC612_05090 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC612_05090 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AC612_05095 PF00107 Zinc-binding dehydrogenase AC612_05095 PF08240 Alcohol dehydrogenase GroES-like domain AC612_05100 PF05736 OprF membrane domain AC612_05100 PF00691 OmpA family AC612_05110 PF00849 RNA pseudouridylate synthase AC612_05120 PF00155 Aminotransferase class I and II AC612_05130 PF00528 Binding-protein-dependent transport system inner membrane component AC612_05135 PF00528 Binding-protein-dependent transport system inner membrane component AC612_05140 PF12857 TOBE-like domain AC612_05140 PF17850 CysA C-terminal regulatory domain AC612_05140 PF00005 ABC transporter AC612_05150 PF08240 Alcohol dehydrogenase GroES-like domain AC612_05150 PF00107 Zinc-binding dehydrogenase AC612_05160 PF05506 Domain of unknown function (DUF756) AC612_05160 PF04185 Phosphoesterase family AC612_05165 PF10459 Peptidase S46 AC612_05170 PF00300 Histidine phosphatase superfamily (branch 1) AC612_05175 PF02875 Mur ligase family, glutamate ligase domain AC612_05175 PF08245 Mur ligase middle domain AC612_05190 PF00156 Phosphoribosyl transferase domain AC612_05195 PF04305 Protein of unknown function (DUF455) AC612_05210 PF00149 Calcineurin-like phosphoesterase AC612_05215 PF01569 PAP2 superfamily AC612_05220 PF13439 Glycosyltransferase Family 4 AC612_05220 PF00534 Glycosyl transferases group 1 AC612_05225 PF02541 Ppx/GppA phosphatase family AC612_05230 PF17941 Polyphosphate kinase C-terminal domain 1 AC612_05230 PF13090 Polyphosphate kinase C-terminal domain 2 AC612_05230 PF02503 Polyphosphate kinase middle domain AC612_05230 PF13089 Polyphosphate kinase N-terminal domain AC612_05235 PF00512 His Kinase A (phospho-acceptor) domain AC612_05235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_05235 PF11808 Phosphate regulon sensor protein PhoR AC612_05235 PF00989 PAS fold AC612_05240 PF00486 Transcriptional regulatory protein, C terminal AC612_05240 PF00072 Response regulator receiver domain AC612_05245 PF01435 Peptidase family M48 AC612_05245 PF13181 Tetratricopeptide repeat AC612_05250 PF00462 Glutaredoxin AC612_05260 PF00180 Isocitrate/isopropylmalate dehydrogenase AC612_05300 PF05697 Bacterial trigger factor protein (TF) AC612_05300 PF05698 Bacterial trigger factor protein (TF) C-terminus AC612_05305 PF00574 Clp protease AC612_05310 PF06689 ClpX C4-type zinc finger AC612_05310 PF10431 C-terminal, D2-small domain, of ClpB protein AC612_05310 PF07724 AAA domain (Cdc48 subfamily) AC612_05315 PF00004 ATPase family associated with various cellular activities (AAA) AC612_05315 PF05362 Lon protease (S16) C-terminal proteolytic domain AC612_05315 PF02190 ATP-dependent protease La (LON) substrate-binding domain AC612_05320 PF00216 Bacterial DNA-binding protein AC612_05345 PF05257 CHAP domain AC612_05345 PF01476 LysM domain AC612_05350 PF00753 Metallo-beta-lactamase superfamily AC612_05350 PF16123 Hydroxyacylglutathione hydrolase C-terminus AC612_05360 PF00075 RNase H AC612_05365 PF00929 Exonuclease AC612_05385 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AC612_05395 PF12706 Beta-lactamase superfamily domain AC612_05395 PF00753 Metallo-beta-lactamase superfamily AC612_05400 PF04055 Radical SAM superfamily AC612_05400 PF06463 Molybdenum Cofactor Synthesis C AC612_05410 PF01967 MoaC family AC612_05415 PF02597 ThiS family AC612_05420 PF02391 MoaE protein AC612_05455 PF00872 Transposase, Mutator family AC612_05460 PF01609 Transposase DDE domain AC612_05460 PF05598 Transposase domain (DUF772) AC612_05470 PF00872 Transposase, Mutator family AC612_05485 PF12169 DNA polymerase III subunits gamma and tau domain III AC612_05485 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AC612_05485 PF12170 DNA polymerase III tau subunit V interacting with alpha AC612_05490 PF02575 YbaB/EbfC DNA-binding family AC612_05495 PF02132 RecR protein AC612_05495 PF13662 Toprim domain AC612_05500 PF01230 HIT domain AC612_05510 PF01841 Transglutaminase-like superfamily AC612_05510 PF11992 Domain of unknown function (DUF3488) AC612_05510 PF13559 Domain of unknown function (DUF4129) AC612_05520 PF07726 ATPase family associated with various cellular activities (AAA) AC612_05520 PF17863 AAA lid domain AC612_05540 PF02545 Maf-like protein AC612_05545 PF02620 Large ribosomal RNA subunit accumulation protein YceD AC612_05550 PF01783 Ribosomal L32p protein family AC612_05555 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AC612_05555 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AC612_05565 PF00698 Acyl transferase domain AC612_05575 PF00550 Phosphopantetheine attachment site AC612_05580 PF02801 Beta-ketoacyl synthase, C-terminal domain AC612_05580 PF00109 Beta-ketoacyl synthase, N-terminal domain AC612_05585 PF04715 Anthranilate synthase component I, N terminal region AC612_05585 PF00425 chorismate binding enzyme AC612_05590 PF02618 YceG-like family AC612_05595 PF09115 DNA polymerase III, delta subunit, C terminal AC612_05615 PF00158 Sigma-54 interaction domain AC612_05615 PF06506 Propionate catabolism activator AC612_05615 PF02954 Bacterial regulatory protein, Fis family AC612_05625 PF00285 Citrate synthase, C-terminal domain AC612_05630 PF00694 Aconitase C-terminal domain AC612_05630 PF00330 Aconitase family (aconitate hydratase) AC612_05635 PF04303 PrpF protein AC612_05640 PF00593 TonB dependent receptor AC612_05640 PF07715 TonB-dependent Receptor Plug Domain AC612_05650 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AC612_05650 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AC612_05650 PF17962 Bacterial macroglobulin domain 6 AC612_05650 PF00207 Alpha-2-macroglobulin family AC612_05650 PF01835 MG2 domain AC612_05650 PF07703 Alpha-2-macroglobulin bait region domain AC612_05650 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AC612_05650 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain AC612_05665 PF00905 Penicillin binding protein transpeptidase domain AC612_05665 PF06832 Penicillin-Binding Protein C-terminus Family AC612_05665 PF00912 Transglycosylase AC612_05675 PF08534 Redoxin AC612_05685 PF01556 DnaJ C terminal domain AC612_05685 PF00226 DnaJ domain AC612_05690 PF00072 Response regulator receiver domain AC612_05695 PF01145 SPFH domain / Band 7 family AC612_05695 PF12221 Bacterial membrane protein N terminal AC612_05700 PF01145 SPFH domain / Band 7 family AC612_05710 PF00709 Adenylosuccinate synthetase AC612_05730 PF00440 Bacterial regulatory proteins, tetR family AC612_05740 PF00872 Transposase, Mutator family AC612_05745 PF02384 N-6 DNA Methylase AC612_05750 PF08780 Nucleotidyltransferase substrate binding protein like AC612_05760 PF01609 Transposase DDE domain AC612_05760 PF05598 Transposase domain (DUF772) AC612_05765 PF01420 Type I restriction modification DNA specificity domain AC612_05780 PF01609 Transposase DDE domain AC612_05780 PF05598 Transposase domain (DUF772) AC612_05785 PF11867 Domain of unknown function (DUF3387) AC612_05785 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AC612_05785 PF18766 SWI2/SNF2 ATPase AC612_05810 PF00300 Histidine phosphatase superfamily (branch 1) AC612_05810 PF13456 Reverse transcriptase-like AC612_05815 PF01256 Carbohydrate kinase AC612_05825 PF00723 Glycosyl hydrolases family 15 AC612_05835 PF00872 Transposase, Mutator family AC612_05840 PF07971 Glycosyl hydrolase family 92 AC612_05840 PF17678 Glycosyl hydrolase family 92 N-terminal domain AC612_05845 PF00106 short chain dehydrogenase AC612_05860 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC612_05880 PF17755 UvrA DNA-binding domain AC612_05890 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AC612_05890 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AC612_05895 PF00941 FAD binding domain in molybdopterin dehydrogenase AC612_05895 PF03450 CO dehydrogenase flavoprotein C-terminal domain AC612_05900 PF00111 2Fe-2S iron-sulfur cluster binding domain AC612_05900 PF01799 [2Fe-2S] binding domain AC612_05935 PF00717 Peptidase S24-like AC612_05935 PF01726 LexA DNA binding domain AC612_05955 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AC612_05955 PF07733 Bacterial DNA polymerase III alpha NTPase domain AC612_05955 PF02811 PHP domain AC612_05955 PF14579 Helix-hairpin-helix motif AC612_05970 PF03169 OPT oligopeptide transporter protein AC612_05985 PF00326 Prolyl oligopeptidase family AC612_05985 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AC612_05985 PF07676 WD40-like Beta Propeller Repeat AC612_06000 PF02311 AraC-like ligand binding domain AC612_06000 PF12833 Helix-turn-helix domain AC612_06020 PF18011 C-terminal domain found in long catalases AC612_06020 PF06628 Catalase-related immune-responsive AC612_06020 PF00199 Catalase AC612_06025 PF00248 Aldo/keto reductase family AC612_06030 PF00135 Carboxylesterase family AC612_06035 PF02347 Glycine cleavage system P-protein AC612_06040 PF07690 Major Facilitator Superfamily AC612_06055 PF00884 Sulfatase AC612_06055 PF08019 Phosphoethanolamine transferase EptA/EptB AC612_06070 PF00072 Response regulator receiver domain AC612_06070 PF00486 Transcriptional regulatory protein, C terminal AC612_06075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_06075 PF08521 Two-component sensor kinase N-terminal AC612_06075 PF00512 His Kinase A (phospho-acceptor) domain AC612_06085 PF03776 Septum formation topological specificity factor MinE AC612_06090 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AC612_06095 PF03775 Septum formation inhibitor MinC, C-terminal domain AC612_06095 PF05209 Septum formation inhibitor MinC, N-terminal domain AC612_06105 PF07730 Histidine kinase AC612_06110 PF00072 Response regulator receiver domain AC612_06110 PF00196 Bacterial regulatory proteins, luxR family AC612_06125 PF00730 HhH-GPD superfamily base excision DNA repair protein AC612_06150 PF02222 ATP-grasp domain AC612_06160 PF04377 Arginine-tRNA-protein transferase, C terminus AC612_06160 PF04376 Arginine-tRNA-protein transferase, N terminus AC612_06185 PF00378 Enoyl-CoA hydratase/isomerase AC612_06200 PF17760 UvrA interaction domain AC612_06200 PF17755 UvrA DNA-binding domain AC612_06200 PF00005 ABC transporter AC612_06205 PF00829 Ribosomal prokaryotic L21 protein AC612_06210 PF01016 Ribosomal L27 protein AC612_06215 PF01018 GTP1/OBG AC612_06215 PF01926 50S ribosome-binding GTPase AC612_06220 PF01649 Ribosomal protein S20 AC612_06225 PF03023 Lipid II flippase MurJ AC612_06230 PF01687 Riboflavin kinase AC612_06230 PF06574 FAD synthetase AC612_06235 PF00133 tRNA synthetases class I (I, L, M and V) AC612_06235 PF06827 Zinc finger found in FPG and IleRS AC612_06235 PF08264 Anticodon-binding domain of tRNA AC612_06240 PF01252 Signal peptidase (SPase) II AC612_06245 PF02401 LytB protein AC612_06275 PF00872 Transposase, Mutator family AC612_06290 PF06481 COX Aromatic Rich Motif AC612_06290 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AC612_06295 PF00115 Cytochrome C and Quinol oxidase polypeptide I AC612_06300 PF00510 Cytochrome c oxidase subunit III AC612_06305 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AC612_06315 PF18073 Rubredoxin metal binding domain AC612_06325 PF00872 Transposase, Mutator family AC612_06330 PF00872 Transposase, Mutator family AC612_06335 PF05656 Protein of unknown function (DUF805) AC612_06345 PF12833 Helix-turn-helix domain AC612_06350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_06350 PF00183 Hsp90 protein AC612_06360 PF08678 Rsbr N terminal AC612_06360 PF01740 STAS domain AC612_06365 PF01740 STAS domain AC612_06370 PF13581 Histidine kinase-like ATPase domain AC612_06380 PF01627 Hpt domain AC612_06380 PF17149 Periplasmic sensor domain found in signal transduction proteins AC612_06380 PF00512 His Kinase A (phospho-acceptor) domain AC612_06380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_06380 PF00072 Response regulator receiver domain AC612_06380 PF00672 HAMP domain AC612_06385 PF08448 PAS fold AC612_06385 PF13188 PAS domain AC612_06385 PF00072 Response regulator receiver domain AC612_06385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_06385 PF00512 His Kinase A (phospho-acceptor) domain AC612_06395 PF00593 TonB dependent receptor AC612_06395 PF07715 TonB-dependent Receptor Plug Domain AC612_06400 PF00085 Thioredoxin AC612_06405 PF07237 Protein of unknown function (DUF1428) AC612_06415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_06415 PF13493 Domain of unknown function (DUF4118) AC612_06415 PF02702 Osmosensitive K+ channel His kinase sensor domain AC612_06415 PF13492 GAF domain AC612_06415 PF00512 His Kinase A (phospho-acceptor) domain AC612_06420 PF01339 CheB methylesterase AC612_06425 PF03705 CheR methyltransferase, all-alpha domain AC612_06425 PF01739 CheR methyltransferase, SAM binding domain AC612_06430 PF00672 HAMP domain AC612_06430 PF00512 His Kinase A (phospho-acceptor) domain AC612_06430 PF01627 Hpt domain AC612_06430 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AC612_06430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_06430 PF00072 Response regulator receiver domain AC612_06435 PF00072 Response regulator receiver domain AC612_06435 PF13426 PAS domain AC612_06435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_06440 PF00072 Response regulator receiver domain AC612_06450 PF00872 Transposase, Mutator family AC612_06455 PF01609 Transposase DDE domain AC612_06455 PF05598 Transposase domain (DUF772) AC612_06465 PF00488 MutS domain V AC612_06465 PF01624 MutS domain I AC612_06465 PF05188 MutS domain II AC612_06465 PF05190 MutS family domain IV AC612_06465 PF05192 MutS domain III AC612_06475 PF00141 Peroxidase AC612_06480 PF01479 S4 domain AC612_06500 PF01554 MatE AC612_06505 PF01245 Ribosomal protein L19 AC612_06510 PF01746 tRNA (Guanine-1)-methyltransferase AC612_06515 PF01782 RimM N-terminal domain AC612_06515 PF05239 PRC-barrel domain AC612_06520 PF00886 Ribosomal protein S16 AC612_06530 PF03060 Nitronate monooxygenase AC612_06540 PF02978 Signal peptide binding domain AC612_06540 PF00448 SRP54-type protein, GTPase domain AC612_06540 PF02881 SRP54-type protein, helical bundle domain AC612_06545 PF01578 Cytochrome C assembly protein AC612_06550 PF01263 Aldose 1-epimerase AC612_06560 PF06964 Alpha-L-arabinofuranosidase C-terminal domain AC612_06570 PF00872 Transposase, Mutator family AC612_06575 PF01527 Transposase AC612_06590 PF00703 Glycosyl hydrolases family 2 AC612_06590 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AC612_06590 PF02837 Glycosyl hydrolases family 2, sugar binding domain AC612_06590 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 AC612_06590 PF16355 Domain of unknown function (DUF4982) AC612_06595 PF07745 Glycosyl hydrolase family 53 AC612_06605 PF09856 Predicted transcriptional regulator (DUF2083) AC612_06605 PF06114 IrrE N-terminal-like domain AC612_06605 PF01381 Helix-turn-helix AC612_06610 PF00171 Aldehyde dehydrogenase family AC612_06615 PF02770 Acyl-CoA dehydrogenase, middle domain AC612_06615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC612_06615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC612_06620 PF00378 Enoyl-CoA hydratase/isomerase AC612_06625 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AC612_06625 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AC612_06625 PF00378 Enoyl-CoA hydratase/isomerase AC612_06630 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AC612_06630 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AC612_06635 PF01545 Cation efflux family AC612_06655 PF01121 Dephospho-CoA kinase AC612_06660 PF01478 Type IV leader peptidase family AC612_06660 PF06750 Bacterial Peptidase A24 N-terminal domain AC612_06665 PF00482 Type II secretion system (T2SS), protein F AC612_06670 PF00114 Pilin (bacterial filament) AC612_06670 PF07963 Prokaryotic N-terminal methylation motif AC612_06680 PF07963 Prokaryotic N-terminal methylation motif AC612_06680 PF00114 Pilin (bacterial filament) AC612_06685 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AC612_06685 PF00437 Type II/IV secretion system protein AC612_06690 PF02954 Bacterial regulatory protein, Fis family AC612_06690 PF00158 Sigma-54 interaction domain AC612_06690 PF00072 Response regulator receiver domain AC612_06700 PF00512 His Kinase A (phospho-acceptor) domain AC612_06700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_06705 PF00549 CoA-ligase AC612_06705 PF08442 ATP-grasp domain AC612_06710 PF00549 CoA-ligase AC612_06710 PF02629 CoA binding domain AC612_06715 PF00872 Transposase, Mutator family AC612_06725 PF00795 Carbon-nitrogen hydrolase AC612_06725 PF02540 NAD synthase AC612_06735 PF13525 Outer membrane lipoprotein AC612_06740 PF00849 RNA pseudouridylate synthase AC612_06755 PF04134 Protein of unknown function, DUF393 AC612_06760 PF00672 HAMP domain AC612_06760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC612_06760 PF02203 Tar ligand binding domain homologue AC612_06765 PF01011 PQQ enzyme repeat AC612_06770 PF00982 Glycosyltransferase family 20 AC612_06775 PF00723 Glycosyl hydrolases family 15 AC612_06780 PF02358 Trehalose-phosphatase AC612_06785 PF07715 TonB-dependent Receptor Plug Domain AC612_06785 PF00593 TonB dependent receptor AC612_06820 PF01541 GIY-YIG catalytic domain AC612_06825 PF07715 TonB-dependent Receptor Plug Domain AC612_06825 PF00593 TonB dependent receptor AC612_06835 PF00248 Aldo/keto reductase family AC612_06840 PF09084 NMT1/THI5 like AC612_06845 PF00528 Binding-protein-dependent transport system inner membrane component AC612_06850 PF00005 ABC transporter AC612_06855 PF07724 AAA domain (Cdc48 subfamily) AC612_06855 PF10431 C-terminal, D2-small domain, of ClpB protein AC612_06855 PF17871 AAA lid domain AC612_06855 PF00004 ATPase family associated with various cellular activities (AAA) AC612_06855 PF02861 Clp amino terminal domain, pathogenicity island component AC612_06865 PF07715 TonB-dependent Receptor Plug Domain AC612_06865 PF00593 TonB dependent receptor AC612_06885 PF12557 Cob(I)alamin adenosyltransferase N terminal AC612_06885 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AC612_06890 PF03186 CobD/Cbib protein AC612_06890 PF17113 Regulatory signalling modulator protein AmpE AC612_06900 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AC612_06900 PF07685 CobB/CobQ-like glutamine amidotransferase domain AC612_06905 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AC612_06910 PF02277 Phosphoribosyltransferase AC612_06920 PF02654 Cobalamin-5-phosphate synthase AC612_06935 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AC612_06935 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AC612_06945 PF07690 Major Facilitator Superfamily AC612_06950 PF04183 IucA / IucC family AC612_06950 PF06276 Ferric iron reductase FhuF-like transporter AC612_06960 PF07715 TonB-dependent Receptor Plug Domain AC612_06960 PF00593 TonB dependent receptor AC612_06960 PF07660 Secretin and TonB N terminus short domain AC612_06970 PF00999 Sodium/hydrogen exchanger family AC612_06970 PF02254 TrkA-N domain AC612_06980 PF07715 TonB-dependent Receptor Plug Domain AC612_06980 PF00593 TonB dependent receptor AC612_06985 PF07715 TonB-dependent Receptor Plug Domain AC612_06985 PF00593 TonB dependent receptor AC612_06995 PF07715 TonB-dependent Receptor Plug Domain AC612_06995 PF00593 TonB dependent receptor AC612_07000 PF12848 ABC transporter AC612_07000 PF00005 ABC transporter AC612_07010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC612_07010 PF03466 LysR substrate binding domain AC612_07025 PF05506 Domain of unknown function (DUF756) AC612_07025 PF04185 Phosphoesterase family AC612_07035 PF07690 Major Facilitator Superfamily AC612_07050 PF01336 OB-fold nucleic acid binding domain AC612_07050 PF02938 GAD domain AC612_07050 PF00152 tRNA synthetases class II (D, K and N) AC612_07065 PF01709 Transcriptional regulator AC612_07070 PF02075 Crossover junction endodeoxyribonuclease RuvC AC612_07075 PF01330 RuvA N terminal domain AC612_07075 PF07499 RuvA, C-terminal domain AC612_07080 PF02705 K+ potassium transporter AC612_07085 PF05496 Holliday junction DNA helicase RuvB P-loop domain AC612_07085 PF17864 RuvB AAA lid domain AC612_07085 PF05491 RuvB C-terminal winged helix domain AC612_07090 PF03061 Thioesterase superfamily AC612_07095 PF01618 MotA/TolQ/ExbB proton channel family AC612_07100 PF02472 Biopolymer transport protein ExbD/TolR AC612_07110 PF07676 WD40-like Beta Propeller Repeat AC612_07110 PF04052 TolB amino-terminal domain AC612_07115 PF00691 OmpA family AC612_07125 PF04055 Radical SAM superfamily AC612_07135 PF06508 Queuosine biosynthesis protein QueC AC612_07140 PF13426 PAS domain AC612_07140 PF07536 HWE histidine kinase AC612_07140 PF13581 Histidine kinase-like ATPase domain AC612_07160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC612_07160 PF02203 Tar ligand binding domain homologue AC612_07160 PF00672 HAMP domain AC612_07170 PF01527 Transposase AC612_07205 PF09382 RQC domain AC612_07205 PF16124 RecQ zinc-binding AC612_07205 PF00271 Helicase conserved C-terminal domain AC612_07205 PF00270 DEAD/DEAH box helicase AC612_07205 PF00570 HRDC domain AC612_07210 PF00210 Ferritin-like domain AC612_07215 PF04408 Helicase associated domain (HA2) AC612_07215 PF00270 DEAD/DEAH box helicase AC612_07215 PF11898 Domain of unknown function (DUF3418) AC612_07215 PF00271 Helicase conserved C-terminal domain AC612_07215 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AC612_07225 PF02685 Glucokinase AC612_07240 PF13186 Iron-sulfur cluster-binding domain AC612_07240 PF04055 Radical SAM superfamily AC612_07245 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AC612_07250 PF03070 TENA/THI-4/PQQC family AC612_07255 PF12706 Beta-lactamase superfamily domain AC612_07260 PF02824 TGS domain AC612_07260 PF04607 Region found in RelA / SpoT proteins AC612_07260 PF13291 ACT domain AC612_07270 PF00535 Glycosyl transferase family 2 AC612_07275 PF14814 Bifunctional transglycosylase second domain AC612_07275 PF00905 Penicillin binding protein transpeptidase domain AC612_07275 PF00912 Transglycosylase AC612_07285 PF13307 Helicase C-terminal domain AC612_07285 PF04851 Type III restriction enzyme, res subunit AC612_07290 PF00814 Glycoprotease family AC612_07295 PF03747 ADP-ribosylglycohydrolase AC612_07305 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AC612_07305 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AC612_07310 PF00072 Response regulator receiver domain AC612_07315 PF00072 Response regulator receiver domain AC612_07320 PF01584 CheW-like domain AC612_07325 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AC612_07325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC612_07330 PF01584 CheW-like domain AC612_07330 PF01627 Hpt domain AC612_07330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_07330 PF00072 Response regulator receiver domain AC612_07345 PF13302 Acetyltransferase (GNAT) domain AC612_07355 PF01112 Asparaginase AC612_07360 PF03932 CutC family AC612_07395 PF01301 Glycosyl hydrolases family 35 AC612_07400 PF17678 Glycosyl hydrolase family 92 N-terminal domain AC612_07400 PF07971 Glycosyl hydrolase family 92 AC612_07410 PF11975 Family 4 glycosyl hydrolase C-terminal domain AC612_07410 PF02056 Family 4 glycosyl hydrolase AC612_07420 PF13520 Amino acid permease AC612_07435 PF01527 Transposase AC612_07445 PF00933 Glycosyl hydrolase family 3 N terminal domain AC612_07445 PF14310 Fibronectin type III-like domain AC612_07445 PF07691 PA14 domain AC612_07445 PF01915 Glycosyl hydrolase family 3 C-terminal domain AC612_07455 PF07691 PA14 domain AC612_07455 PF02838 Glycosyl hydrolase family 20, domain 2 AC612_07455 PF00728 Glycosyl hydrolase family 20, catalytic domain AC612_07460 PF00704 Glycosyl hydrolases family 18 AC612_07460 PF01476 LysM domain AC612_07475 PF02685 Glucokinase AC612_07480 PF04452 RNA methyltransferase AC612_07485 PF00202 Aminotransferase class-III AC612_07490 PF00293 NUDIX domain AC612_07495 PF00459 Inositol monophosphatase family AC612_07500 PF03819 MazG nucleotide pyrophosphohydrolase domain AC612_07505 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AC612_07515 PF08669 Glycine cleavage T-protein C-terminal barrel domain AC612_07515 PF01571 Aminomethyltransferase folate-binding domain AC612_07520 PF01597 Glycine cleavage H-protein AC612_07540 PF00872 Transposase, Mutator family AC612_07545 PF01527 Transposase AC612_07565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC612_07565 PF09317 Domain of unknown function (DUF1974) AC612_07565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC612_07570 PF00561 alpha/beta hydrolase fold AC612_07575 PF00440 Bacterial regulatory proteins, tetR family AC612_07580 PF05598 Transposase domain (DUF772) AC612_07580 PF01609 Transposase DDE domain AC612_07585 PF05598 Transposase domain (DUF772) AC612_07585 PF01609 Transposase DDE domain AC612_07590 PF00872 Transposase, Mutator family AC612_07595 PF07715 TonB-dependent Receptor Plug Domain AC612_07595 PF00593 TonB dependent receptor AC612_07605 PF01430 Hsp33 protein AC612_07610 PF00912 Transglycosylase AC612_07615 PF00535 Glycosyl transferase family 2 AC612_07620 PF00478 IMP dehydrogenase / GMP reductase domain AC612_07620 PF00571 CBS domain AC612_07625 PF05170 AsmA family AC612_07630 PF03006 Haemolysin-III related AC612_07635 PF16658 Class II release factor RF3, C-terminal domain AC612_07635 PF00009 Elongation factor Tu GTP binding domain AC612_07640 PF01476 LysM domain AC612_07640 PF08525 Opacity-associated protein A N-terminal motif AC612_07640 PF01551 Peptidase family M23 AC612_07645 PF00561 alpha/beta hydrolase fold AC612_07650 PF01053 Cys/Met metabolism PLP-dependent enzyme AC612_07655 PF00696 Amino acid kinase family AC612_07655 PF03447 Homoserine dehydrogenase, NAD binding domain AC612_07655 PF00742 Homoserine dehydrogenase AC612_07660 PF12697 Alpha/beta hydrolase family AC612_07665 PF03315 Serine dehydratase beta chain AC612_07665 PF03313 Serine dehydratase alpha chain AC612_07685 PF04264 YceI-like domain AC612_07690 PF00512 His Kinase A (phospho-acceptor) domain AC612_07690 PF01627 Hpt domain AC612_07690 PF00072 Response regulator receiver domain AC612_07690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_07695 PF00497 Bacterial extracellular solute-binding proteins, family 3 AC612_07695 PF00072 Response regulator receiver domain AC612_07695 PF00512 His Kinase A (phospho-acceptor) domain AC612_07695 PF01627 Hpt domain AC612_07695 PF00989 PAS fold AC612_07695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_07700 PF00512 His Kinase A (phospho-acceptor) domain AC612_07700 PF01627 Hpt domain AC612_07700 PF00072 Response regulator receiver domain AC612_07700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_07700 PF00672 HAMP domain AC612_07700 PF17149 Periplasmic sensor domain found in signal transduction proteins AC612_07705 PF00672 HAMP domain AC612_07705 PF00072 Response regulator receiver domain AC612_07705 PF01627 Hpt domain AC612_07705 PF00512 His Kinase A (phospho-acceptor) domain AC612_07705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_07705 PF17149 Periplasmic sensor domain found in signal transduction proteins AC612_07710 PF07690 Major Facilitator Superfamily AC612_07715 PF01208 Uroporphyrinogen decarboxylase (URO-D) AC612_07725 PF01761 3-dehydroquinate synthase AC612_07730 PF01202 Shikimate kinase AC612_07735 PF01243 Pyridoxamine 5'-phosphate oxidase AC612_07735 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AC612_07745 PF04012 PspA/IM30 family AC612_07770 PF03738 Glutathionylspermidine synthase preATP-grasp AC612_07775 PF07690 Major Facilitator Superfamily AC612_07780 PF09278 MerR, DNA binding AC612_07780 PF00376 MerR family regulatory protein AC612_07815 PF12706 Beta-lactamase superfamily domain AC612_07835 PF00324 Amino acid permease AC612_07840 PF00196 Bacterial regulatory proteins, luxR family AC612_07850 PF00561 alpha/beta hydrolase fold AC612_07860 PF00872 Transposase, Mutator family AC612_07865 PF00324 Amino acid permease AC612_07875 PF01654 Cytochrome bd terminal oxidase subunit I AC612_07880 PF02322 Cytochrome bd terminal oxidase subunit II AC612_07885 PF00756 Putative esterase AC612_07890 PF01769 Divalent cation transporter AC612_07890 PF00571 CBS domain AC612_07890 PF03448 MgtE intracellular N domain AC612_07895 PF00391 PEP-utilising enzyme, mobile domain AC612_07895 PF05524 PEP-utilising enzyme, N-terminal AC612_07895 PF02896 PEP-utilising enzyme, TIM barrel domain AC612_07900 PF00381 PTS HPr component phosphorylation site AC612_07910 PF03668 P-loop ATPase protein family AC612_07915 PF07475 HPr Serine kinase C-terminal domain AC612_07915 PF02603 HPr Serine kinase N terminus AC612_07920 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AC612_07925 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AC612_07930 PF04963 Sigma-54 factor, core binding domain AC612_07930 PF04552 Sigma-54, DNA binding domain AC612_07930 PF00309 Sigma-54 factor, Activator interacting domain (AID) AC612_07935 PF00005 ABC transporter AC612_07940 PF03968 OstA-like protein AC612_07955 PF00571 CBS domain AC612_07955 PF01380 SIS domain AC612_07960 PF01722 BolA-like protein AC612_07965 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AC612_07985 PF00551 Formyl transferase AC612_07995 PF02769 AIR synthase related protein, C-terminal domain AC612_07995 PF00586 AIR synthase related protein, N-terminal domain AC612_08005 PF01594 AI-2E family transporter AC612_08010 PF00308 Bacterial dnaA protein AC612_08015 PF00483 Nucleotidyl transferase AC612_08020 PF01636 Phosphotransferase enzyme family AC612_08045 PF00258 Flavodoxin AC612_08045 PF00175 Oxidoreductase NAD-binding domain AC612_08045 PF00667 FAD binding domain AC612_08050 PF02424 ApbE family AC612_08075 PF18331 PKHD-type hydroxylase C-terminal domain AC612_08075 PF13640 2OG-Fe(II) oxygenase superfamily AC612_08080 PF07715 TonB-dependent Receptor Plug Domain AC612_08080 PF00593 TonB dependent receptor AC612_08085 PF00355 Rieske [2Fe-2S] domain AC612_08095 PF00266 Aminotransferase class-V AC612_08100 PF01458 Uncharacterized protein family (UPF0051) AC612_08105 PF00005 ABC transporter AC612_08110 PF01458 Uncharacterized protein family (UPF0051) AC612_08115 PF02082 Transcriptional regulator AC612_08125 PF01965 DJ-1/PfpI family AC612_08145 PF01551 Peptidase family M23 AC612_08155 PF14748 Pyrroline-5-carboxylate reductase dimerisation AC612_08155 PF03807 NADP oxidoreductase coenzyme F420-dependent AC612_08160 PF01168 Alanine racemase, N-terminal domain AC612_08165 PF00437 Type II/IV secretion system protein AC612_08170 PF00437 Type II/IV secretion system protein AC612_08185 PF13673 Acetyltransferase (GNAT) domain AC612_08185 PF03352 Methyladenine glycosylase AC612_08185 PF13302 Acetyltransferase (GNAT) domain AC612_08185 PF00958 GMP synthase C terminal domain AC612_08185 PF00117 Glutamine amidotransferase class-I AC612_08195 PF02622 Uncharacterized ACR, COG1678 AC612_08200 PF03652 Holliday junction resolvase AC612_08205 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AC612_08205 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AC612_08210 PF02566 OsmC-like protein AC612_08220 PF02567 Phenazine biosynthesis-like protein AC612_08225 PF02567 Phenazine biosynthesis-like protein AC612_08230 PF00696 Amino acid kinase family AC612_08230 PF01842 ACT domain AC612_08245 PF02875 Mur ligase family, glutamate ligase domain AC612_08245 PF08245 Mur ligase middle domain AC612_08255 PF00348 Polyprenyl synthetase AC612_08260 PF00436 Single-strand binding protein family AC612_08265 PF00990 Diguanylate cyclase, GGDEF domain AC612_08265 PF01590 GAF domain AC612_08265 PF00360 Phytochrome region AC612_08265 PF00563 EAL domain AC612_08270 PF00698 Acyl transferase domain AC612_08270 PF02801 Beta-ketoacyl synthase, C-terminal domain AC612_08270 PF00107 Zinc-binding dehydrogenase AC612_08270 PF08240 Alcohol dehydrogenase GroES-like domain AC612_08270 PF00109 Beta-ketoacyl synthase, N-terminal domain AC612_08270 PF08659 KR domain AC612_08270 PF00550 Phosphopantetheine attachment site AC612_08270 PF16197 Ketoacyl-synthetase C-terminal extension AC612_08270 PF14765 Polyketide synthase dehydratase AC612_08275 PF00111 2Fe-2S iron-sulfur cluster binding domain AC612_08275 PF10518 TAT (twin-arginine translocation) pathway signal sequence AC612_08275 PF01799 [2Fe-2S] binding domain AC612_08280 PF00941 FAD binding domain in molybdopterin dehydrogenase AC612_08280 PF03450 CO dehydrogenase flavoprotein C-terminal domain AC612_08285 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AC612_08285 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AC612_08290 PF13478 XdhC Rossmann domain AC612_08290 PF02625 XdhC and CoxI family AC612_08340 PF04328 Selenoprotein, putative AC612_08345 PF02554 Carbon starvation protein CstA AC612_08345 PF13722 5TM C-terminal transporter carbon starvation CstA AC612_08350 PF05726 Pirin C-terminal cupin domain AC612_08350 PF02678 Pirin AC612_08365 PF05726 Pirin C-terminal cupin domain AC612_08365 PF02678 Pirin AC612_08370 PF00872 Transposase, Mutator family AC612_08380 PF04493 Endonuclease V AC612_08385 PF00300 Histidine phosphatase superfamily (branch 1) AC612_08395 PF05649 Peptidase family M13 AC612_08395 PF01431 Peptidase family M13 AC612_08400 PF13091 PLD-like domain AC612_08405 PF00072 Response regulator receiver domain AC612_08405 PF01339 CheB methylesterase AC612_08410 PF03705 CheR methyltransferase, all-alpha domain AC612_08410 PF01739 CheR methyltransferase, SAM binding domain AC612_08415 PF00990 Diguanylate cyclase, GGDEF domain AC612_08415 PF00563 EAL domain AC612_08415 PF13426 PAS domain AC612_08420 PF01584 CheW-like domain AC612_08425 PF00672 HAMP domain AC612_08425 PF02203 Tar ligand binding domain homologue AC612_08425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC612_08430 PF01584 CheW-like domain AC612_08430 PF09078 CheY binding AC612_08430 PF02895 Signal transducing histidine kinase, homodimeric domain AC612_08430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_08430 PF01627 Hpt domain AC612_08440 PF00271 Helicase conserved C-terminal domain AC612_08440 PF00270 DEAD/DEAH box helicase AC612_08440 PF02559 CarD-like/TRCF domain AC612_08440 PF17757 UvrB interaction domain AC612_08440 PF03461 TRCF domain AC612_08450 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AC612_08455 PF00486 Transcriptional regulatory protein, C terminal AC612_08455 PF00072 Response regulator receiver domain AC612_08460 PF00512 His Kinase A (phospho-acceptor) domain AC612_08460 PF00672 HAMP domain AC612_08460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_08475 PF06123 Inner membrane protein CreD AC612_08500 PF00749 tRNA synthetases class I (E and Q), catalytic domain AC612_08505 PF01475 Ferric uptake regulator family AC612_08515 PF00529 HlyD membrane-fusion protein of T1SS AC612_08515 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC612_08520 PF00873 AcrB/AcrD/AcrF family AC612_08525 PF02321 Outer membrane efflux protein AC612_08530 PF16859 Tetracyclin repressor-like, C-terminal domain AC612_08530 PF00440 Bacterial regulatory proteins, tetR family AC612_08540 PF12833 Helix-turn-helix domain AC612_08540 PF06719 AraC-type transcriptional regulator N-terminus AC612_08550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC612_08550 PF03466 LysR substrate binding domain AC612_08555 PF07690 Major Facilitator Superfamily AC612_08560 PF00248 Aldo/keto reductase family AC612_08570 PF01483 Proprotein convertase P-domain AC612_08570 PF00082 Subtilase family AC612_08580 PF00593 TonB dependent receptor AC612_08580 PF07715 TonB-dependent Receptor Plug Domain AC612_08595 PF00107 Zinc-binding dehydrogenase AC612_08595 PF08240 Alcohol dehydrogenase GroES-like domain AC612_08600 PF00654 Voltage gated chloride channel AC612_08610 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AC612_08610 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AC612_08655 PF04542 Sigma-70 region 2 AC612_08655 PF08281 Sigma-70, region 4 AC612_08660 PF00270 DEAD/DEAH box helicase AC612_08660 PF00271 Helicase conserved C-terminal domain AC612_08660 PF03880 DbpA RNA binding domain AC612_08665 PF08448 PAS fold AC612_08665 PF00990 Diguanylate cyclase, GGDEF domain AC612_08665 PF00563 EAL domain AC612_08670 PF01479 S4 domain AC612_08670 PF00849 RNA pseudouridylate synthase AC612_08675 PF00990 Diguanylate cyclase, GGDEF domain AC612_08675 PF00072 Response regulator receiver domain AC612_08695 PF03737 Aldolase/RraA AC612_08700 PF00144 Beta-lactamase AC612_08705 PF00999 Sodium/hydrogen exchanger family AC612_08710 PF00512 His Kinase A (phospho-acceptor) domain AC612_08710 PF00672 HAMP domain AC612_08710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_08715 PF00486 Transcriptional regulatory protein, C terminal AC612_08715 PF00072 Response regulator receiver domain AC612_08720 PF02321 Outer membrane efflux protein AC612_08735 PF00873 AcrB/AcrD/AcrF family AC612_08745 PF00664 ABC transporter transmembrane region AC612_08745 PF00005 ABC transporter AC612_08775 PF03466 LysR substrate binding domain AC612_08775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC612_08785 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AC612_08790 PF04070 Domain of unknown function (DUF378) AC612_08805 PF00872 Transposase, Mutator family AC612_08830 PF00085 Thioredoxin AC612_08840 PF13603 Leucyl-tRNA synthetase, Domain 2 AC612_08840 PF08264 Anticodon-binding domain of tRNA AC612_08840 PF00133 tRNA synthetases class I (I, L, M and V) AC612_08855 PF01467 Cytidylyltransferase-like AC612_08870 PF02590 Predicted SPOUT methyltransferase AC612_08885 PF04402 Protein of unknown function (DUF541) AC612_08890 PF02545 Maf-like protein AC612_08895 PF00575 S1 RNA binding domain AC612_08895 PF10150 Ribonuclease E/G family AC612_08900 PF13116 Protein of unknown function AC612_08900 PF13502 AsmA-like C-terminal region AC612_08910 PF01523 Putative modulator of DNA gyrase AC612_08915 PF04751 Protein of unknown function (DUF615) AC612_08920 PF01523 Putative modulator of DNA gyrase AC612_08930 PF14521 Lysine-specific metallo-endopeptidase AC612_08935 PF00348 Polyprenyl synthetase AC612_08940 PF02609 Exonuclease VII small subunit AC612_08945 PF01171 PP-loop family AC612_08945 PF09179 TilS substrate binding domain AC612_08945 PF11734 TilS substrate C-terminal domain AC612_08950 PF00245 Alkaline phosphatase AC612_08955 PF00375 Sodium:dicarboxylate symporter family AC612_08970 PF00877 NlpC/P60 family AC612_08975 PF00877 NlpC/P60 family AC612_08980 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AC612_08985 PF04235 Protein of unknown function (DUF418) AC612_08990 PF01266 FAD dependent oxidoreductase AC612_08995 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC612_08995 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AC612_09015 PF01431 Peptidase family M13 AC612_09015 PF05649 Peptidase family M13 AC612_09020 PF01431 Peptidase family M13 AC612_09020 PF05649 Peptidase family M13 AC612_09030 PF01609 Transposase DDE domain AC612_09030 PF05598 Transposase domain (DUF772) AC612_09040 PF07715 TonB-dependent Receptor Plug Domain AC612_09040 PF00593 TonB dependent receptor AC612_09045 PF10609 NUBPL iron-transfer P-loop NTPase AC612_09050 PF00692 dUTPase AC612_09070 PF01738 Dienelactone hydrolase family AC612_09090 PF00145 C-5 cytosine-specific DNA methylase AC612_09095 PF00872 Transposase, Mutator family AC612_09100 PF18693 TRAM domain AC612_09100 PF04055 Radical SAM superfamily AC612_09100 PF00919 Uncharacterized protein family UPF0004 AC612_09105 PF01272 Transcription elongation factor, GreA/GreB, C-term AC612_09105 PF03449 Transcription elongation factor, N-terminal AC612_09120 PF00293 NUDIX domain AC612_09125 PF05872 Bacterial protein of unknown function (DUF853) AC612_09135 PF02666 Phosphatidylserine decarboxylase AC612_09140 PF02630 SCO1/SenC AC612_09145 PF05175 Methyltransferase small domain AC612_09150 PF01264 Chorismate synthase AC612_09155 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AC612_09155 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AC612_09160 PF01118 Semialdehyde dehydrogenase, NAD binding domain AC612_09160 PF02774 Semialdehyde dehydrogenase, dimerisation domain AC612_09180 PF01416 tRNA pseudouridine synthase AC612_09185 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AC612_09190 PF03466 LysR substrate binding domain AC612_09190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC612_09195 PF00291 Pyridoxal-phosphate dependent enzyme AC612_09205 PF00290 Tryptophan synthase alpha chain AC612_09210 PF17848 Acetyl-coA carboxylase zinc finger domain AC612_09210 PF01039 Carboxyl transferase domain AC612_09215 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AC612_09215 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AC612_09215 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AC612_09215 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AC612_09235 PF03707 Bacterial signalling protein N terminal repeat AC612_09235 PF00990 Diguanylate cyclase, GGDEF domain AC612_09235 PF00563 EAL domain AC612_09250 PF00106 short chain dehydrogenase AC612_09255 PF00121 Triosephosphate isomerase AC612_09270 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AC612_09275 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AC612_09280 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AC612_09285 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AC612_09295 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AC612_09295 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AC612_09295 PF10531 SLBB domain AC612_09300 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AC612_09300 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal AC612_09300 PF00384 Molybdopterin oxidoreductase AC612_09305 PF00146 NADH dehydrogenase AC612_09310 PF12838 4Fe-4S dicluster domain AC612_09315 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AC612_09320 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AC612_09325 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AC612_09325 PF00361 Proton-conducting membrane transporter AC612_09330 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AC612_09330 PF00361 Proton-conducting membrane transporter AC612_09335 PF00361 Proton-conducting membrane transporter AC612_09345 PF02576 RimP N-terminal domain AC612_09345 PF17384 RimP C-terminal SH3 domain AC612_09350 PF00575 S1 RNA binding domain AC612_09350 PF13184 NusA-like KH domain AC612_09350 PF08529 NusA N-terminal domain AC612_09355 PF11987 Translation-initiation factor 2 AC612_09355 PF08364 Bacterial translation initiation factor IF-2 associated region AC612_09355 PF04760 Translation initiation factor IF-2, N-terminal region AC612_09355 PF00009 Elongation factor Tu GTP binding domain AC612_09360 PF02033 Ribosome-binding factor A AC612_09365 PF01509 TruB family pseudouridylate synthase (N terminal domain) AC612_09365 PF09157 Pseudouridine synthase II TruB, C-terminal AC612_09365 PF16198 tRNA pseudouridylate synthase B C-terminal domain AC612_09370 PF00312 Ribosomal protein S15 AC612_09375 PF01138 3' exoribonuclease family, domain 1 AC612_09375 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AC612_09375 PF00575 S1 RNA binding domain AC612_09375 PF00013 KH domain AC612_09375 PF03725 3' exoribonuclease family, domain 2 AC612_09385 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AC612_09385 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AC612_09395 PF00731 AIR carboxylase AC612_09400 PF02222 ATP-grasp domain AC612_09400 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AC612_09405 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AC612_09405 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AC612_09410 PF00462 Glutaredoxin AC612_09420 PF01914 MarC family integral membrane protein AC612_09425 PF00593 TonB dependent receptor AC612_09430 PF11892 Domain of unknown function (DUF3412) AC612_09430 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AC612_09430 PF03641 Possible lysine decarboxylase AC612_09435 PF00114 Pilin (bacterial filament) AC612_09435 PF07963 Prokaryotic N-terminal methylation motif AC612_09480 PF00872 Transposase, Mutator family AC612_09490 PF00872 Transposase, Mutator family AC612_09495 PF02151 UvrB/uvrC motif AC612_09495 PF12344 Ultra-violet resistance protein B AC612_09495 PF04851 Type III restriction enzyme, res subunit AC612_09495 PF00271 Helicase conserved C-terminal domain AC612_09495 PF17757 UvrB interaction domain AC612_09510 PF02534 Type IV secretory system Conjugative DNA transfer AC612_09530 PF03743 Bacterial conjugation TrbI-like protein AC612_09535 PF00437 Type II/IV secretion system protein AC612_09540 PF01464 Transglycosylase SLT domain AC612_09555 PF03135 CagE, TrbE, VirB family, component of type IV transporter system AC612_09590 PF00872 Transposase, Mutator family AC612_09600 PF00183 Hsp90 protein AC612_09600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_09610 PF01467 Cytidylyltransferase-like AC612_09620 PF00037 4Fe-4S binding domain AC612_09635 PF02927 Cellulase N-terminal ig-like domain AC612_09635 PF00759 Glycosyl hydrolase family 9 AC612_09680 PF02547 Queuosine biosynthesis protein AC612_09685 PF01702 Queuine tRNA-ribosyltransferase AC612_09690 PF02699 Preprotein translocase subunit AC612_09695 PF07549 SecD/SecF GG Motif AC612_09695 PF13721 SecD export protein N-terminal TM region AC612_09695 PF02355 Protein export membrane protein AC612_09700 PF02355 Protein export membrane protein AC612_09700 PF07549 SecD/SecF GG Motif AC612_09705 PF00872 Transposase, Mutator family AC612_09715 PF00872 Transposase, Mutator family AC612_09725 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AC612_09730 PF00294 pfkB family carbohydrate kinase AC612_09735 PF02896 PEP-utilising enzyme, TIM barrel domain AC612_09735 PF00381 PTS HPr component phosphorylation site AC612_09735 PF00391 PEP-utilising enzyme, mobile domain AC612_09735 PF05524 PEP-utilising enzyme, N-terminal AC612_09735 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AC612_09740 PF00356 Bacterial regulatory proteins, lacI family AC612_09745 PF00873 AcrB/AcrD/AcrF family AC612_09750 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC612_09750 PF00529 HlyD membrane-fusion protein of T1SS AC612_09760 PF05088 Bacterial NAD-glutamate dehydrogenase AC612_09770 PF16197 Ketoacyl-synthetase C-terminal extension AC612_09770 PF00698 Acyl transferase domain AC612_09770 PF08659 KR domain AC612_09770 PF02801 Beta-ketoacyl synthase, C-terminal domain AC612_09770 PF00109 Beta-ketoacyl synthase, N-terminal domain AC612_09770 PF08990 Erythronolide synthase docking AC612_09770 PF08240 Alcohol dehydrogenase GroES-like domain AC612_09770 PF14765 Polyketide synthase dehydratase AC612_09770 PF00550 Phosphopantetheine attachment site AC612_09775 PF00106 short chain dehydrogenase AC612_09780 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AC612_09785 PF00440 Bacterial regulatory proteins, tetR family AC612_09790 PF00106 short chain dehydrogenase AC612_09810 PF07690 Major Facilitator Superfamily AC612_09815 PF00072 Response regulator receiver domain AC612_09820 PF00072 Response regulator receiver domain AC612_09820 PF00512 His Kinase A (phospho-acceptor) domain AC612_09820 PF01627 Hpt domain AC612_09820 PF00672 HAMP domain AC612_09820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_09820 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AC612_09825 PF04286 Protein of unknown function (DUF445) AC612_09835 PF00202 Aminotransferase class-III AC612_09840 PF07690 Major Facilitator Superfamily AC612_09850 PF00384 Molybdopterin oxidoreductase AC612_09860 PF00083 Sugar (and other) transporter AC612_09860 PF07690 Major Facilitator Superfamily AC612_09865 PF01814 Hemerythrin HHE cation binding domain AC612_09870 PF00990 Diguanylate cyclase, GGDEF domain AC612_09870 PF00072 Response regulator receiver domain AC612_09875 PF01266 FAD dependent oxidoreductase AC612_09880 PF00120 Glutamine synthetase, catalytic domain AC612_09885 PF07722 Peptidase C26 AC612_09890 PF00120 Glutamine synthetase, catalytic domain AC612_09895 PF00202 Aminotransferase class-III AC612_09900 PF13416 Bacterial extracellular solute-binding protein AC612_09905 PF13533 Biotin-lipoyl like AC612_09910 PF07690 Major Facilitator Superfamily AC612_09915 PF02321 Outer membrane efflux protein AC612_09925 PF00528 Binding-protein-dependent transport system inner membrane component AC612_09930 PF00528 Binding-protein-dependent transport system inner membrane component AC612_09940 PF00171 Aldehyde dehydrogenase family AC612_09955 PF00571 CBS domain AC612_09955 PF03471 Transporter associated domain AC612_09965 PF02130 Uncharacterized protein family UPF0054 AC612_09975 PF02562 PhoH-like protein AC612_09980 PF00919 Uncharacterized protein family UPF0004 AC612_09980 PF04055 Radical SAM superfamily AC612_09980 PF01938 TRAM domain AC612_09995 PF01464 Transglycosylase SLT domain AC612_10000 PF00355 Rieske [2Fe-2S] domain AC612_10000 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AC612_10005 PF00032 Cytochrome b(C-terminal)/b6/petD AC612_10005 PF00033 Cytochrome b/b6/petB AC612_10010 PF02167 Cytochrome C1 family AC612_10015 PF00043 Glutathione S-transferase, C-terminal domain AC612_10015 PF02798 Glutathione S-transferase, N-terminal domain AC612_10020 PF04386 Stringent starvation protein B AC612_10035 PF00271 Helicase conserved C-terminal domain AC612_10035 PF00270 DEAD/DEAH box helicase AC612_10035 PF08494 DEAD/H associated AC612_10040 PF02245 Methylpurine-DNA glycosylase (MPG) AC612_10045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC612_10045 PF00672 HAMP domain AC612_10045 PF02743 Cache domain AC612_10050 PF01584 CheW-like domain AC612_10080 PF04679 ATP dependent DNA ligase C terminal region AC612_10080 PF13298 DNA polymerase Ligase (LigD) AC612_10080 PF01068 ATP dependent DNA ligase domain AC612_10085 PF01612 3'-5' exonuclease AC612_10085 PF00570 HRDC domain AC612_10090 PF03781 Sulfatase-modifying factor enzyme 1 AC612_10100 PF13742 OB-fold nucleic acid binding domain AC612_10100 PF02601 Exonuclease VII, large subunit AC612_10105 PF08331 Domain of unknown function (DUF1730) AC612_10110 PF01256 Carbohydrate kinase AC612_10110 PF03853 YjeF-related protein N-terminus AC612_10115 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AC612_10120 PF01520 N-acetylmuramoyl-L-alanine amidase AC612_10120 PF11741 AMIN domain AC612_10125 PF08676 MutL C terminal dimerisation domain AC612_10125 PF01119 DNA mismatch repair protein, C-terminal domain AC612_10140 PF05233 PHB accumulation regulatory domain AC612_10140 PF07879 PHB/PHA accumulation regulator DNA-binding domain AC612_10145 PF00106 short chain dehydrogenase AC612_10150 PF00749 tRNA synthetases class I (E and Q), catalytic domain AC612_10155 PF01435 Peptidase family M48 AC612_10160 PF01609 Transposase DDE domain AC612_10160 PF05598 Transposase domain (DUF772) AC612_10165 PF00072 Response regulator receiver domain AC612_10165 PF00563 EAL domain AC612_10165 PF00990 Diguanylate cyclase, GGDEF domain AC612_10175 PF07152 YaeQ protein AC612_10180 PF00313 'Cold-shock' DNA-binding domain AC612_10185 PF14497 Glutathione S-transferase, C-terminal domain AC612_10185 PF02798 Glutathione S-transferase, N-terminal domain AC612_10190 PF07859 alpha/beta hydrolase fold AC612_10195 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AC612_10200 PF00156 Phosphoribosyl transferase domain AC612_10205 PF00271 Helicase conserved C-terminal domain AC612_10205 PF03880 DbpA RNA binding domain AC612_10205 PF00270 DEAD/DEAH box helicase AC612_10220 PF00545 ribonuclease AC612_10225 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AC612_10225 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AC612_10230 PF00459 Inositol monophosphatase family AC612_10235 PF00588 SpoU rRNA Methylase family AC612_10245 PF00990 Diguanylate cyclase, GGDEF domain AC612_10245 PF00563 EAL domain AC612_10245 PF13188 PAS domain AC612_10245 PF03707 Bacterial signalling protein N terminal repeat AC612_10250 PF04055 Radical SAM superfamily AC612_10255 PF09285 Elongation factor P, C-terminal AC612_10255 PF08207 Elongation factor P (EF-P) KOW-like domain AC612_10255 PF01132 Elongation factor P (EF-P) OB domain AC612_10265 PF01979 Amidohydrolase family AC612_10275 PF13419 Haloacid dehalogenase-like hydrolase AC612_10285 PF01527 Transposase AC612_10290 PF13276 HTH-like domain AC612_10290 PF13333 Integrase core domain AC612_10290 PF00665 Integrase core domain AC612_10295 PF00295 Glycosyl hydrolases family 28 AC612_10310 PF00753 Metallo-beta-lactamase superfamily AC612_10320 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AC612_10325 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AC612_10335 PF01551 Peptidase family M23 AC612_10335 PF08460 Bacterial SH3 domain AC612_10340 PF01979 Amidohydrolase family AC612_10345 PF01809 Putative membrane protein insertion efficiency factor AC612_10355 PF01258 Prokaryotic dksA/traR C4-type zinc finger AC612_10365 PF02657 Fe-S metabolism associated domain AC612_10370 PF09190 DALR domain AC612_10370 PF01406 tRNA synthetases class I (C) catalytic domain AC612_10380 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AC612_10380 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AC612_10385 PF00764 Arginosuccinate synthase AC612_10400 PF00696 Amino acid kinase family AC612_10400 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase AC612_10410 PF01118 Semialdehyde dehydrogenase, NAD binding domain AC612_10415 PF00206 Lyase AC612_10425 PF00696 Amino acid kinase family AC612_10425 PF01472 PUA domain AC612_10430 PF00171 Aldehyde dehydrogenase family AC612_10440 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AC612_10440 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AC612_10450 PF00589 Phage integrase family AC612_10540 PF02322 Cytochrome bd terminal oxidase subunit II AC612_10545 PF01654 Cytochrome bd terminal oxidase subunit I AC612_10550 PF00664 ABC transporter transmembrane region AC612_10550 PF00005 ABC transporter AC612_10555 PF00005 ABC transporter AC612_10555 PF00664 ABC transporter transmembrane region AC612_10560 PF00313 'Cold-shock' DNA-binding domain AC612_10565 PF00561 alpha/beta hydrolase fold AC612_10575 PF03918 Cytochrome C biogenesis protein AC612_10580 PF08534 Redoxin AC612_10585 PF01578 Cytochrome C assembly protein AC612_10585 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AC612_10590 PF03100 CcmE AC612_10600 PF01578 Cytochrome C assembly protein AC612_10605 PF03379 CcmB protein AC612_10610 PF00005 ABC transporter AC612_10615 PF00155 Aminotransferase class I and II AC612_10620 PF00795 Carbon-nitrogen hydrolase AC612_10635 PF01479 S4 domain AC612_10635 PF00849 RNA pseudouridylate synthase AC612_10640 PF04079 Segregation and condensation complex subunit ScpB AC612_10645 PF02616 Segregation and condensation protein ScpA AC612_10650 PF03795 YCII-related domain AC612_10660 PF00356 Bacterial regulatory proteins, lacI family AC612_10680 PF00528 Binding-protein-dependent transport system inner membrane component AC612_10685 PF00528 Binding-protein-dependent transport system inner membrane component AC612_10710 PF00795 Carbon-nitrogen hydrolase AC612_10715 PF04371 Porphyromonas-type peptidyl-arginine deiminase AC612_10725 PF00444 Ribosomal protein L36 AC612_10730 PF02224 Cytidylate kinase AC612_10735 PF00575 S1 RNA binding domain AC612_10740 PF00216 Bacterial DNA-binding protein AC612_10750 PF18073 Rubredoxin metal binding domain AC612_10755 PF00953 Glycosyl transferase family 4 AC612_10760 PF02719 Polysaccharide biosynthesis protein AC612_10765 PF00483 Nucleotidyl transferase AC612_10770 PF02254 TrkA-N domain AC612_10770 PF00999 Sodium/hydrogen exchanger family AC612_10780 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AC612_10780 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AC612_10785 PF00571 CBS domain AC612_10785 PF00478 IMP dehydrogenase / GMP reductase domain AC612_10790 PF02540 NAD synthase AC612_10790 PF00958 GMP synthase C terminal domain AC612_10790 PF00117 Glutamine amidotransferase class-I AC612_10800 PF00872 Transposase, Mutator family AC612_10840 PF00072 Response regulator receiver domain AC612_10840 PF00196 Bacterial regulatory proteins, luxR family AC612_10850 PF12833 Helix-turn-helix domain AC612_10855 PF00857 Isochorismatase family AC612_10865 PF07969 Amidohydrolase family AC612_10870 PF05977 Transmembrane secretion effector AC612_10885 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AC612_10885 PF10414 Sirohaem synthase dimerisation region AC612_10885 PF14824 Sirohaem biosynthesis protein central AC612_10900 PF05974 Domain of unknown function (DUF892) AC612_10920 PF00990 Diguanylate cyclase, GGDEF domain AC612_10920 PF00563 EAL domain AC612_10920 PF08448 PAS fold AC612_10920 PF08447 PAS fold AC612_10925 PF12951 Passenger-associated-transport-repeat AC612_10930 PF00196 Bacterial regulatory proteins, luxR family AC612_10930 PF00072 Response regulator receiver domain AC612_10935 PF13426 PAS domain AC612_10935 PF00512 His Kinase A (phospho-acceptor) domain AC612_10935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_10935 PF00072 Response regulator receiver domain AC612_10935 PF08448 PAS fold AC612_10945 PF00873 AcrB/AcrD/AcrF family AC612_10950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC612_10955 PF03797 Autotransporter beta-domain AC612_10955 PF00082 Subtilase family AC612_10965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_10965 PF06580 Histidine kinase AC612_10965 PF07694 5TMR of 5TMR-LYT AC612_10965 PF13492 GAF domain AC612_10970 PF00072 Response regulator receiver domain AC612_10970 PF04397 LytTr DNA-binding domain AC612_10975 PF00144 Beta-lactamase AC612_10985 PF07995 Glucose / Sorbosone dehydrogenase AC612_10990 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AC612_11005 PF01494 FAD binding domain AC612_11010 PF07536 HWE histidine kinase AC612_11010 PF13581 Histidine kinase-like ATPase domain AC612_11010 PF13426 PAS domain AC612_11030 PF05114 Protein of unknown function (DUF692) AC612_11045 PF00881 Nitroreductase family AC612_11050 PF01965 DJ-1/PfpI family AC612_11055 PF00107 Zinc-binding dehydrogenase AC612_11055 PF08240 Alcohol dehydrogenase GroES-like domain AC612_11060 PF01609 Transposase DDE domain AC612_11060 PF05598 Transposase domain (DUF772) AC612_11105 PF00550 Phosphopantetheine attachment site AC612_11105 PF00668 Condensation domain AC612_11105 PF00501 AMP-binding enzyme AC612_11105 PF13193 AMP-binding enzyme C-terminal domain AC612_11110 PF13193 AMP-binding enzyme C-terminal domain AC612_11110 PF00501 AMP-binding enzyme AC612_11110 PF00550 Phosphopantetheine attachment site AC612_11110 PF13193 AMP-binding enzyme C-terminal domain AC612_11110 PF00668 Condensation domain AC612_11110 PF00668 Condensation domain AC612_11110 PF00501 AMP-binding enzyme AC612_11110 PF00550 Phosphopantetheine attachment site AC612_11115 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AC612_11115 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AC612_11135 PF00109 Beta-ketoacyl synthase, N-terminal domain AC612_11135 PF02801 Beta-ketoacyl synthase, C-terminal domain AC612_11140 PF00005 ABC transporter AC612_11150 PF03621 MbtH-like protein AC612_11155 PF00975 Thioesterase domain AC612_11185 PF17091 Inovirus G7P protein AC612_11230 PF02303 Helix-destabilising protein AC612_11255 PF05857 TraX protein AC612_11275 PF05857 TraX protein AC612_11300 PF02303 Helix-destabilising protein AC612_11315 PF00106 short chain dehydrogenase AC612_11320 PF05199 GMC oxidoreductase AC612_11320 PF00732 GMC oxidoreductase AC612_11370 PF01106 NifU-like domain AC612_11375 PF01329 Pterin 4 alpha carbinolamine dehydratase AC612_11385 PF02535 ZIP Zinc transporter AC612_11390 PF01609 Transposase DDE domain AC612_11390 PF05598 Transposase domain (DUF772) AC612_11395 PF11737 Protein of unknown function (DUF3300) AC612_11400 PF01479 S4 domain AC612_11400 PF00849 RNA pseudouridylate synthase AC612_11405 PF12111 Polyribonucleotide phosphorylase C terminal AC612_11405 PF10150 Ribonuclease E/G family AC612_11405 PF00575 S1 RNA binding domain AC612_11410 PF00072 Response regulator receiver domain AC612_11410 PF00196 Bacterial regulatory proteins, luxR family AC612_11425 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AC612_11435 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AC612_11435 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AC612_11435 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AC612_11460 PF00872 Transposase, Mutator family AC612_11475 PF13683 Integrase core domain AC612_11475 PF13276 HTH-like domain AC612_11485 PF10544 T5orf172 domain AC612_11500 PF00872 Transposase, Mutator family AC612_11530 PF13614 AAA domain AC612_11565 PF00436 Single-strand binding protein family AC612_11570 PF01131 DNA topoisomerase AC612_11570 PF01751 Toprim domain AC612_11590 PF00202 Aminotransferase class-III AC612_11605 PF13406 Transglycosylase SLT domain AC612_11615 PF05598 Transposase domain (DUF772) AC612_11615 PF01609 Transposase DDE domain AC612_11620 PF00872 Transposase, Mutator family AC612_11815 PF03466 LysR substrate binding domain AC612_11815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC612_11820 PF07690 Major Facilitator Superfamily AC612_11840 PF01527 Transposase AC612_11935 PF00004 ATPase family associated with various cellular activities (AAA) AC612_11935 PF07724 AAA domain (Cdc48 subfamily) AC612_11935 PF17871 AAA lid domain AC612_11935 PF10431 C-terminal, D2-small domain, of ClpB protein AC612_11990 PF04717 Type VI secretion system, phage-baseplate injector AC612_11990 PF16671 Actin cross-linking domain AC612_12040 PF04717 Type VI secretion system, phage-baseplate injector AC612_12050 PF04972 BON domain AC612_12050 PF00691 OmpA family AC612_12095 PF00589 Phage integrase family AC612_12095 PF13356 Arm DNA-binding domain AC612_12105 PF01066 CDP-alcohol phosphatidyltransferase AC612_12110 PF08459 UvrC Helix-hairpin-helix N-terminal AC612_12110 PF02151 UvrB/uvrC motif AC612_12110 PF01541 GIY-YIG catalytic domain AC612_12120 PF01451 Low molecular weight phosphotyrosine protein phosphatase AC612_12125 PF02348 Cytidylyltransferase AC612_12130 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AC612_12135 PF00005 ABC transporter AC612_12135 PF00664 ABC transporter transmembrane region AC612_12140 PF02472 Biopolymer transport protein ExbD/TolR AC612_12145 PF01618 MotA/TolQ/ExbB proton channel family AC612_12150 PF03772 Competence protein AC612_12150 PF00753 Metallo-beta-lactamase superfamily AC612_12160 PF00005 ABC transporter AC612_12165 PF02687 FtsX-like permease family AC612_12165 PF12704 MacB-like periplasmic core domain AC612_12175 PF03937 Flavinator of succinate dehydrogenase AC612_12180 PF13085 2Fe-2S iron-sulfur cluster binding domain AC612_12190 PF00890 FAD binding domain AC612_12190 PF02910 Fumarate reductase flavoprotein C-term AC612_12195 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AC612_12200 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AC612_12205 PF01571 Aminomethyltransferase folate-binding domain AC612_12210 PF17912 MalK OB fold domain AC612_12210 PF00005 ABC transporter AC612_12215 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AC612_12215 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AC612_12220 PF02685 Glucokinase AC612_12225 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AC612_12230 PF00920 Dehydratase family AC612_12235 PF01081 KDPG and KHG aldolase AC612_12240 PF00873 AcrB/AcrD/AcrF family AC612_12245 PF00873 AcrB/AcrD/AcrF family AC612_12250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC612_12260 PF00034 Cytochrome c AC612_12305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_12305 PF00512 His Kinase A (phospho-acceptor) domain AC612_12305 PF09308 LuxQ, periplasmic AC612_12305 PF00072 Response regulator receiver domain AC612_12310 PF09371 Tex-like protein N-terminal domain AC612_12310 PF17674 HHH domain AC612_12310 PF00575 S1 RNA binding domain AC612_12310 PF16921 Tex protein YqgF-like domain AC612_12320 PF00355 Rieske [2Fe-2S] domain AC612_12320 PF01266 FAD dependent oxidoreductase AC612_12335 PF00561 alpha/beta hydrolase fold AC612_12345 PF01066 CDP-alcohol phosphatidyltransferase AC612_12365 PF03618 Kinase/pyrophosphorylase AC612_12370 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AC612_12370 PF02896 PEP-utilising enzyme, TIM barrel domain AC612_12370 PF00391 PEP-utilising enzyme, mobile domain AC612_12375 PF05552 Conserved TM helix AC612_12375 PF00924 Mechanosensitive ion channel AC612_12380 PF00929 Exonuclease AC612_12385 PF14437 MafB19-like deaminase AC612_12390 PF01325 Iron dependent repressor, N-terminal DNA binding domain AC612_12390 PF02742 Iron dependent repressor, metal binding and dimerisation domain AC612_12395 PF01566 Natural resistance-associated macrophage protein AC612_12400 PF00561 alpha/beta hydrolase fold AC612_12425 PF12804 MobA-like NTP transferase domain AC612_12430 PF03454 MoeA C-terminal region (domain IV) AC612_12430 PF03453 MoeA N-terminal region (domain I and II) AC612_12430 PF00994 Probable molybdopterin binding domain AC612_12440 PF03372 Endonuclease/Exonuclease/phosphatase family AC612_12450 PF08240 Alcohol dehydrogenase GroES-like domain AC612_12450 PF13823 Alcohol dehydrogenase GroES-associated AC612_12450 PF00107 Zinc-binding dehydrogenase AC612_12475 PF00899 ThiF family AC612_12480 PF03454 MoeA C-terminal region (domain IV) AC612_12480 PF03453 MoeA N-terminal region (domain I and II) AC612_12480 PF00994 Probable molybdopterin binding domain AC612_12485 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AC612_12485 PF01926 50S ribosome-binding GTPase AC612_12490 PF01011 PQQ enzyme repeat AC612_12490 PF13360 PQQ-like domain AC612_12500 PF13464 Domain of unknown function (DUF4115) AC612_12510 PF04055 Radical SAM superfamily AC612_12515 PF00334 Nucleoside diphosphate kinase AC612_12525 PF00378 Enoyl-CoA hydratase/isomerase AC612_12525 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AC612_12525 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AC612_12530 PF00108 Thiolase, N-terminal domain AC612_12530 PF02803 Thiolase, C-terminal domain AC612_12535 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AC612_12540 PF12002 MgsA AAA+ ATPase C terminal AC612_12540 PF16193 AAA C-terminal domain AC612_12540 PF00004 ATPase family associated with various cellular activities (AAA) AC612_12550 PF03548 Outer membrane lipoprotein carrier protein LolA AC612_12560 PF09397 Ftsk gamma domain AC612_12560 PF17854 FtsK alpha domain AC612_12560 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AC612_12560 PF01580 FtsK/SpoIIIE family AC612_12565 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC612_12575 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AC612_12580 PF01176 Translation initiation factor 1A / IF-1 AC612_12585 PF02861 Clp amino terminal domain, pathogenicity island component AC612_12585 PF00004 ATPase family associated with various cellular activities (AAA) AC612_12585 PF07724 AAA domain (Cdc48 subfamily) AC612_12585 PF10431 C-terminal, D2-small domain, of ClpB protein AC612_12585 PF17871 AAA lid domain AC612_12590 PF02617 ATP-dependent Clp protease adaptor protein ClpS AC612_12595 PF00293 NUDIX domain AC612_12605 PF04356 Protein of unknown function (DUF489) AC612_12610 PF00672 HAMP domain AC612_12610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC612_12610 PF12729 Four helix bundle sensory module for signal transduction AC612_12620 PF03707 Bacterial signalling protein N terminal repeat AC612_12620 PF00563 EAL domain AC612_12620 PF00990 Diguanylate cyclase, GGDEF domain AC612_12625 PF07730 Histidine kinase AC612_12625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_12630 PF03707 Bacterial signalling protein N terminal repeat AC612_12630 PF00990 Diguanylate cyclase, GGDEF domain AC612_12630 PF00563 EAL domain AC612_12635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_12635 PF00989 PAS fold AC612_12635 PF13188 PAS domain AC612_12635 PF13426 PAS domain AC612_12635 PF00512 His Kinase A (phospho-acceptor) domain AC612_12655 PF01584 CheW-like domain AC612_12655 PF00072 Response regulator receiver domain AC612_12665 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AC612_12665 PF00460 Flagella basal body rod protein AC612_12670 PF03963 Flagellar hook capping protein - N-terminal region AC612_12675 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AC612_12675 PF00460 Flagella basal body rod protein AC612_12675 PF07559 Flagellar basal body protein FlaE AC612_12680 PF00460 Flagella basal body rod protein AC612_12680 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AC612_12685 PF00460 Flagella basal body rod protein AC612_12685 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AC612_12690 PF02107 Flagellar L-ring protein AC612_12695 PF02119 Flagellar P-ring protein AC612_12700 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AC612_12700 PF10135 Rod binding protein AC612_12705 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AC612_12705 PF07196 Flagellin hook IN motif AC612_12710 PF00669 Bacterial flagellin N-terminal helical region AC612_12710 PF00700 Bacterial flagellin C-terminal helical region AC612_12715 PF05598 Transposase domain (DUF772) AC612_12715 PF01609 Transposase DDE domain AC612_12720 PF00669 Bacterial flagellin N-terminal helical region AC612_12720 PF00700 Bacterial flagellin C-terminal helical region AC612_12725 PF07195 Flagellar hook-associated protein 2 C-terminus AC612_12725 PF07196 Flagellin hook IN motif AC612_12725 PF02465 Flagellar hook-associated protein 2 N-terminus AC612_12730 PF02561 Flagellar protein FliS AC612_12745 PF00196 Bacterial regulatory proteins, luxR family AC612_12745 PF00072 Response regulator receiver domain AC612_12750 PF04552 Sigma-54, DNA binding domain AC612_12750 PF04963 Sigma-54 factor, core binding domain AC612_12750 PF00309 Sigma-54 factor, Activator interacting domain (AID) AC612_12755 PF00072 Response regulator receiver domain AC612_12755 PF01339 CheB methylesterase AC612_12760 PF00158 Sigma-54 interaction domain AC612_12760 PF00072 Response regulator receiver domain AC612_12760 PF02954 Bacterial regulatory protein, Fis family AC612_12765 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AC612_12775 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AC612_12775 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AC612_12815 PF01609 Transposase DDE domain AC612_12815 PF05598 Transposase domain (DUF772) AC612_12825 PF00589 Phage integrase family AC612_12835 PF08212 Lipocalin-like domain AC612_12845 PF02770 Acyl-CoA dehydrogenase, middle domain AC612_12845 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC612_12845 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC612_12845 PF12806 Acetyl-CoA dehydrogenase C-terminal like AC612_12855 PF02780 Transketolase, C-terminal domain AC612_12855 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AC612_12855 PF02779 Transketolase, pyrimidine binding domain AC612_12875 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family AC612_12880 PF00753 Metallo-beta-lactamase superfamily AC612_12880 PF16123 Hydroxyacylglutathione hydrolase C-terminus AC612_12885 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AC612_12885 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AC612_12900 PF03808 Glycosyl transferase WecB/TagA/CpsF family AC612_12915 PF14667 Polysaccharide biosynthesis C-terminal domain AC612_12925 PF13439 Glycosyltransferase Family 4 AC612_12925 PF00534 Glycosyl transferases group 1 AC612_12945 PF02397 Bacterial sugar transferase AC612_12965 PF13411 MerR HTH family regulatory protein AC612_12970 PF00216 Bacterial DNA-binding protein AC612_12975 PF03484 tRNA synthetase B5 domain AC612_12975 PF03147 Ferredoxin-fold anticodon binding domain AC612_12975 PF01588 Putative tRNA binding domain AC612_12975 PF03483 B3/4 domain AC612_12975 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AC612_12980 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AC612_12980 PF01409 tRNA synthetases class II core domain (F) AC612_12985 PF00453 Ribosomal protein L20 AC612_12990 PF01632 Ribosomal protein L35 AC612_12995 PF05198 Translation initiation factor IF-3, N-terminal domain AC612_12995 PF00707 Translation initiation factor IF-3, C-terminal domain AC612_13000 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AC612_13000 PF02824 TGS domain AC612_13000 PF03129 Anticodon binding domain AC612_13000 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AC612_13005 PF00356 Bacterial regulatory proteins, lacI family AC612_13010 PF00128 Alpha amylase, catalytic domain AC612_13010 PF00686 Starch binding domain AC612_13015 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AC612_13045 PF01609 Transposase DDE domain AC612_13045 PF05598 Transposase domain (DUF772) AC612_13050 PF01609 Transposase DDE domain AC612_13050 PF05598 Transposase domain (DUF772) AC612_13070 PF00128 Alpha amylase, catalytic domain AC612_13085 PF05598 Transposase domain (DUF772) AC612_13085 PF01609 Transposase DDE domain AC612_13125 PF04616 Glycosyl hydrolases family 43 AC612_13130 PF07532 Bacterial Ig-like domain (group 4) AC612_13135 PF00593 TonB dependent receptor AC612_13135 PF07715 TonB-dependent Receptor Plug Domain AC612_13145 PF00082 Subtilase family AC612_13145 PF09286 Pro-kumamolisin, activation domain AC612_13170 PF13520 Amino acid permease AC612_13185 PF01321 Creatinase/Prolidase N-terminal domain AC612_13185 PF00557 Metallopeptidase family M24 AC612_13190 PF00171 Aldehyde dehydrogenase family AC612_13195 PF00701 Dihydrodipicolinate synthetase family AC612_13200 PF04324 BFD-like [2Fe-2S] binding domain AC612_13200 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC612_13210 PF01266 FAD dependent oxidoreductase AC612_13215 PF05544 Proline racemase AC612_13225 PF02881 SRP54-type protein, helical bundle domain AC612_13225 PF00448 SRP54-type protein, GTPase domain AC612_13230 PF10576 Iron-sulfur binding domain of endonuclease III AC612_13230 PF00633 Helix-hairpin-helix motif AC612_13230 PF00730 HhH-GPD superfamily base excision DNA repair protein AC612_13230 PF14815 NUDIX domain AC612_13235 PF04362 Bacterial Fe(2+) trafficking AC612_13240 PF13426 PAS domain AC612_13240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_13240 PF00072 Response regulator receiver domain AC612_13275 PF01609 Transposase DDE domain AC612_13275 PF05598 Transposase domain (DUF772) AC612_13290 PF05598 Transposase domain (DUF772) AC612_13290 PF01609 Transposase DDE domain AC612_13305 PF00535 Glycosyl transferase family 2 AC612_13305 PF00534 Glycosyl transferases group 1 AC612_13310 PF02049 Flagellar hook-basal body complex protein FliE AC612_13315 PF08345 Flagellar M-ring protein C-terminal AC612_13315 PF01514 Secretory protein of YscJ/FliF family AC612_13320 PF14842 FliG N-terminal domain AC612_13320 PF14841 FliG middle domain AC612_13320 PF01706 FliG C-terminal domain AC612_13330 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AC612_13330 PF18269 T3SS EscN ATPase C-terminal domain AC612_13350 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AC612_13350 PF02154 Flagellar motor switch protein FliM AC612_13355 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AC612_13360 PF04347 Flagellar biosynthesis protein, FliO AC612_13365 PF00813 FliP family AC612_13370 PF01313 Bacterial export proteins, family 3 AC612_13375 PF01311 Bacterial export proteins, family 1 AC612_13390 PF13188 PAS domain AC612_13390 PF00563 EAL domain AC612_13390 PF00990 Diguanylate cyclase, GGDEF domain AC612_13390 PF03707 Bacterial signalling protein N terminal repeat AC612_13400 PF01312 FlhB HrpN YscU SpaS Family AC612_13405 PF00771 FHIPEP family AC612_13410 PF00448 SRP54-type protein, GTPase domain AC612_13415 PF10609 NUBPL iron-transfer P-loop NTPase AC612_13420 PF04545 Sigma-70, region 4 AC612_13420 PF04539 Sigma-70 region 3 AC612_13420 PF04542 Sigma-70 region 2 AC612_13425 PF00072 Response regulator receiver domain AC612_13430 PF04344 Chemotaxis phosphatase, CheZ AC612_13435 PF01627 Hpt domain AC612_13435 PF07194 P2 response regulator binding domain AC612_13435 PF02895 Signal transducing histidine kinase, homodimeric domain AC612_13435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_13435 PF01584 CheW-like domain AC612_13465 PF05598 Transposase domain (DUF772) AC612_13465 PF01609 Transposase DDE domain AC612_13490 PF00872 Transposase, Mutator family AC612_13505 PF01618 MotA/TolQ/ExbB proton channel family AC612_13510 PF13677 Membrane MotB of proton-channel complex MotA/MotB AC612_13510 PF00691 OmpA family AC612_13515 PF13614 AAA domain AC612_13520 PF01584 CheW-like domain AC612_13530 PF00072 Response regulator receiver domain AC612_13535 PF02895 Signal transducing histidine kinase, homodimeric domain AC612_13535 PF01584 CheW-like domain AC612_13535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_13535 PF09078 CheY binding AC612_13535 PF01627 Hpt domain AC612_13540 PF02203 Tar ligand binding domain homologue AC612_13540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC612_13540 PF00672 HAMP domain AC612_13550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC612_13550 PF00672 HAMP domain AC612_13550 PF17200 Single Cache domain 2 AC612_13550 PF00672 HAMP domain AC612_13550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC612_13550 PF17200 Single Cache domain 2 AC612_13555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC612_13555 PF02203 Tar ligand binding domain homologue AC612_13555 PF00672 HAMP domain AC612_13560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC612_13560 PF00672 HAMP domain AC612_13565 PF00672 HAMP domain AC612_13565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC612_13565 PF02203 Tar ligand binding domain homologue AC612_13575 PF02203 Tar ligand binding domain homologue AC612_13575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC612_13575 PF00672 HAMP domain AC612_13585 PF00672 HAMP domain AC612_13585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC612_13585 PF02203 Tar ligand binding domain homologue AC612_13590 PF00672 HAMP domain AC612_13590 PF02203 Tar ligand binding domain homologue AC612_13590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC612_13595 PF00672 HAMP domain AC612_13595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC612_13595 PF02203 Tar ligand binding domain homologue AC612_13600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC612_13600 PF00672 HAMP domain AC612_13600 PF02203 Tar ligand binding domain homologue AC612_13610 PF07238 PilZ domain AC612_13610 PF07317 Flagellar regulator YcgR AC612_13615 PF01584 CheW-like domain AC612_13625 PF00672 HAMP domain AC612_13625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC612_13625 PF02203 Tar ligand binding domain homologue AC612_13630 PF01739 CheR methyltransferase, SAM binding domain AC612_13630 PF03705 CheR methyltransferase, all-alpha domain AC612_13635 PF03975 CheD chemotactic sensory transduction AC612_13640 PF00072 Response regulator receiver domain AC612_13640 PF01339 CheB methylesterase AC612_13645 PF00990 Diguanylate cyclase, GGDEF domain AC612_13645 PF00563 EAL domain AC612_13645 PF03707 Bacterial signalling protein N terminal repeat AC612_13650 PF00561 alpha/beta hydrolase fold AC612_13655 PF11791 Aconitate B N-terminal domain AC612_13655 PF00330 Aconitase family (aconitate hydratase) AC612_13655 PF06434 Aconitate hydratase 2 N-terminus AC612_13670 PF00694 Aconitase C-terminal domain AC612_13670 PF00330 Aconitase family (aconitate hydratase) AC612_13685 PF13193 AMP-binding enzyme C-terminal domain AC612_13685 PF00501 AMP-binding enzyme AC612_13690 PF00378 Enoyl-CoA hydratase/isomerase AC612_13695 PF00072 Response regulator receiver domain AC612_13695 PF01627 Hpt domain AC612_13695 PF00512 His Kinase A (phospho-acceptor) domain AC612_13695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_13700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_13700 PF00512 His Kinase A (phospho-acceptor) domain AC612_13700 PF00072 Response regulator receiver domain AC612_13700 PF01627 Hpt domain AC612_13705 PF00072 Response regulator receiver domain AC612_13710 PF01336 OB-fold nucleic acid binding domain AC612_13710 PF00152 tRNA synthetases class II (D, K and N) AC612_13715 PF00472 RF-1 domain AC612_13715 PF03462 PCRF domain AC612_13720 PF00072 Response regulator receiver domain AC612_13720 PF04397 LytTr DNA-binding domain AC612_13730 PF01368 DHH family AC612_13730 PF02272 DHHA1 domain AC612_13730 PF17768 RecJ OB domain AC612_13740 PF01272 Transcription elongation factor, GreA/GreB, C-term AC612_13740 PF03449 Transcription elongation factor, N-terminal AC612_13745 PF02142 MGS-like domain AC612_13745 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AC612_13745 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AC612_13755 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AC612_13755 PF00117 Glutamine amidotransferase class-I AC612_13760 PF01113 Dihydrodipicolinate reductase, N-terminus AC612_13760 PF05173 Dihydrodipicolinate reductase, C-terminus AC612_13765 PF03473 MOSC domain AC612_13765 PF03475 3-alpha domain AC612_13770 PF00155 Aminotransferase class I and II AC612_13785 PF07664 Ferrous iron transport protein B C terminus AC612_13785 PF02421 Ferrous iron transport protein B AC612_13785 PF07670 Nucleoside recognition AC612_13795 PF00378 Enoyl-CoA hydratase/isomerase AC612_13805 PF00682 HMGL-like AC612_13810 PF00106 short chain dehydrogenase AC612_13815 PF08207 Elongation factor P (EF-P) KOW-like domain AC612_13815 PF09285 Elongation factor P, C-terminal AC612_13815 PF01132 Elongation factor P (EF-P) OB domain AC612_13835 PF01565 FAD binding domain AC612_13835 PF02913 FAD linked oxidases, C-terminal domain AC612_13840 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AC612_13840 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AC612_13840 PF01842 ACT domain AC612_13850 PF13520 Amino acid permease AC612_13855 PF13520 Amino acid permease AC612_13860 PF00596 Class II Aldolase and Adducin N-terminal domain AC612_13865 PF03079 ARD/ARD' family AC612_13885 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AC612_13885 PF01502 Phosphoribosyl-AMP cyclohydrolase AC612_13890 PF00977 Histidine biosynthesis protein AC612_13895 PF00977 Histidine biosynthesis protein AC612_13900 PF00117 Glutamine amidotransferase class-I AC612_13905 PF00475 Imidazoleglycerol-phosphate dehydratase AC612_13910 PF00155 Aminotransferase class I and II AC612_13915 PF00815 Histidinol dehydrogenase AC612_13920 PF08029 HisG, C-terminal domain AC612_13920 PF01634 ATP phosphoribosyltransferase AC612_13930 PF03129 Anticodon binding domain AC612_13930 PF13393 Histidyl-tRNA synthetase AC612_13935 PF13545 Crp-like helix-turn-helix domain AC612_13935 PF00027 Cyclic nucleotide-binding domain AC612_13945 PF14821 Threonine synthase N terminus AC612_13945 PF00291 Pyridoxal-phosphate dependent enzyme AC612_13955 PF08544 GHMP kinases C terminal AC612_13955 PF00288 GHMP kinases N terminal domain AC612_13960 PF00696 Amino acid kinase family AC612_13960 PF03447 Homoserine dehydrogenase, NAD binding domain AC612_13960 PF01842 ACT domain AC612_13960 PF00742 Homoserine dehydrogenase AC612_13960 PF13840 ACT domain AC612_13965 PF03073 TspO/MBR family AC612_13970 PF01527 Transposase AC612_13975 PF00872 Transposase, Mutator family AC612_13985 PF05598 Transposase domain (DUF772) AC612_13985 PF01609 Transposase DDE domain AC612_14000 PF00872 Transposase, Mutator family AC612_14030 PF00872 Transposase, Mutator family AC612_14045 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AC612_14045 PF17287 POTRA domain AC612_14045 PF08479 POTRA domain, ShlB-type AC612_14055 PF01522 Polysaccharide deacetylase AC612_14055 PF14883 Hypothetical glycosyl hydrolase family 13 AC612_14060 PF00535 Glycosyl transferase family 2 AC612_14075 PF00171 Aldehyde dehydrogenase family AC612_14090 PF01180 Dihydroorotate dehydrogenase AC612_14095 PF01565 FAD binding domain AC612_14095 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AC612_14100 PF00892 EamA-like transporter family AC612_14105 PF01177 Asp/Glu/Hydantoin racemase AC612_14120 PF04551 GcpE protein AC612_14130 PF00072 Response regulator receiver domain AC612_14140 PF02013 Cellulose or protein binding domain AC612_14140 PF00150 Cellulase (glycosyl hydrolase family 5) AC612_14145 PF00360 Phytochrome region AC612_14145 PF00563 EAL domain AC612_14145 PF01590 GAF domain AC612_14145 PF00990 Diguanylate cyclase, GGDEF domain AC612_14150 PF00474 Sodium:solute symporter family AC612_14155 PF01915 Glycosyl hydrolase family 3 C-terminal domain AC612_14155 PF00933 Glycosyl hydrolase family 3 N terminal domain AC612_14155 PF14310 Fibronectin type III-like domain AC612_14175 PF00342 Phosphoglucose isomerase AC612_14180 PF02261 Aspartate decarboxylase AC612_14185 PF02569 Pantoate-beta-alanine ligase AC612_14190 PF02548 Ketopantoate hydroxymethyltransferase AC612_14195 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AC612_14200 PF12627 Probable RNA and SrmB- binding site of polymerase A AC612_14200 PF12626 Polymerase A arginine-rich C-terminus AC612_14200 PF01743 Poly A polymerase head domain AC612_14210 PF02649 Type I GTP cyclohydrolase folE2 AC612_14215 PF01520 N-acetylmuramoyl-L-alanine amidase AC612_14225 PF01609 Transposase DDE domain AC612_14225 PF05598 Transposase domain (DUF772) AC612_14260 PF00872 Transposase, Mutator family AC612_14270 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AC612_14270 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AC612_14280 PF01055 Glycosyl hydrolases family 31 AC612_14280 PF17137 Domain of unknown function (DUF5110) AC612_14280 PF16338 Domain of unknown function (DUF4968) AC612_14285 PF08533 Beta-galactosidase C-terminal domain AC612_14285 PF08532 Beta-galactosidase trimerisation domain AC612_14285 PF02449 Beta-galactosidase AC612_14295 PF03442 Carbohydrate binding domain X2 AC612_14295 PF00942 Cellulose binding domain AC612_14310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC612_14310 PF03466 LysR substrate binding domain AC612_14320 PF01081 KDPG and KHG aldolase AC612_14325 PF13378 Enolase C-terminal domain-like AC612_14325 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AC612_14330 PF08450 SMP-30/Gluconolactonase/LRE-like region AC612_14335 PF05035 2-keto-3-deoxy-galactonokinase AC612_14340 PF11953 Domain of unknown function (DUF3470) AC612_14340 PF00037 4Fe-4S binding domain AC612_14350 PF00701 Dihydrodipicolinate synthetase family AC612_14365 PF00578 AhpC/TSA family AC612_14370 PF13638 PIN domain AC612_14370 PF02562 PhoH-like protein AC612_14385 PF08543 Phosphomethylpyrimidine kinase AC612_14410 PF03466 LysR substrate binding domain AC612_14410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC612_14420 PF17954 Quercetinase C-terminal cupin domain AC612_14420 PF02678 Pirin AC612_14425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC612_14425 PF08447 PAS fold AC612_14425 PF13426 PAS domain AC612_14435 PF02599 Global regulator protein family AC612_14440 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AC612_14440 PF01411 tRNA synthetases class II (A) AC612_14440 PF02272 DHHA1 domain AC612_14445 PF02631 RecX family AC612_14450 PF00154 recA bacterial DNA recombination protein AC612_14455 PF01726 LexA DNA binding domain AC612_14455 PF00717 Peptidase S24-like AC612_14460 PF03109 ABC1 family AC612_14465 PF02464 Competence-damaged protein AC612_14470 PF01926 50S ribosome-binding GTPase AC612_14470 PF16360 GTP-binding GTPase Middle Region AC612_14470 PF13167 GTP-binding GTPase N-terminal AC612_14475 PF17209 Hfq protein AC612_14485 PF00809 Pterin binding enzyme AC612_14490 PF00004 ATPase family associated with various cellular activities (AAA) AC612_14490 PF06480 FtsH Extracellular AC612_14490 PF01434 Peptidase family M41 AC612_14490 PF17862 AAA+ lid domain AC612_14495 PF01728 FtsJ-like methyltransferase AC612_14500 PF01985 CRS1 / YhbY (CRM) domain AC612_14505 PF04430 Protein of unknown function (DUF498/DUF598) AC612_14510 PF01551 Peptidase family M23 AC612_14510 PF01476 LysM domain AC612_14515 PF09335 SNARE associated Golgi protein AC612_14525 PF01975 Survival protein SurE AC612_14530 PF01713 Smr domain AC612_14535 PF01142 tRNA pseudouridine synthase D (TruD) AC612_14540 PF02542 YgbB family AC612_14545 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AC612_14550 PF04977 Septum formation initiator AC612_14555 PF00113 Enolase, C-terminal TIM barrel domain AC612_14555 PF03952 Enolase, N-terminal domain AC612_14565 PF00793 DAHP synthetase I family AC612_14570 PF00117 Glutamine amidotransferase class-I AC612_14570 PF06418 CTP synthase N-terminus AC612_14580 PF00204 DNA gyrase B AC612_14580 PF01751 Toprim domain AC612_14580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_14580 PF00986 DNA gyrase B subunit, carboxyl terminus AC612_14595 PF01384 Phosphate transporter family AC612_14605 PF00571 CBS domain AC612_14605 PF03471 Transporter associated domain AC612_14605 PF01595 Cyclin M transmembrane N-terminal domain AC612_14635 PF00005 ABC transporter AC612_14635 PF00664 ABC transporter transmembrane region AC612_14640 PF00005 ABC transporter AC612_14675 PF08241 Methyltransferase domain AC612_14690 PF00535 Glycosyl transferase family 2 AC612_14695 PF01943 Polysaccharide biosynthesis protein AC612_14700 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AC612_14720 PF05523 WxcM-like, C-terminal AC612_14735 PF00034 Cytochrome c AC612_14745 PF04542 Sigma-70 region 2 AC612_14745 PF08281 Sigma-70, region 4 AC612_14755 PF00082 Subtilase family AC612_14760 PF01578 Cytochrome C assembly protein AC612_14765 PF04995 Heme exporter protein D (CcmD) AC612_14770 PF03100 CcmE AC612_14775 PF01578 Cytochrome C assembly protein AC612_14775 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AC612_14780 PF08534 Redoxin AC612_14785 PF03918 Cytochrome C biogenesis protein AC612_14795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_14795 PF00072 Response regulator receiver domain AC612_14795 PF13426 PAS domain AC612_14800 PF06745 KaiC AC612_14805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_14805 PF00512 His Kinase A (phospho-acceptor) domain AC612_14805 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AC612_14805 PF00072 Response regulator receiver domain AC612_14805 PF00672 HAMP domain AC612_14805 PF01627 Hpt domain AC612_14810 PF00512 His Kinase A (phospho-acceptor) domain AC612_14810 PF13188 PAS domain AC612_14810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_14810 PF08448 PAS fold AC612_14810 PF00072 Response regulator receiver domain AC612_14835 PF00672 HAMP domain AC612_14835 PF02203 Tar ligand binding domain homologue AC612_14835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC612_14850 PF00872 Transposase, Mutator family AC612_14870 PF03466 LysR substrate binding domain AC612_14870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC612_14875 PF02525 Flavodoxin-like fold AC612_14880 PF02403 Seryl-tRNA synthetase N-terminal domain AC612_14880 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AC612_14885 PF03544 Gram-negative bacterial TonB protein C-terminal AC612_14895 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AC612_14900 PF00800 Prephenate dehydratase AC612_14900 PF01842 ACT domain AC612_14900 PF01817 Chorismate mutase type II AC612_14905 PF00266 Aminotransferase class-V AC612_14910 PF00174 Oxidoreductase molybdopterin binding domain AC612_14915 PF01794 Ferric reductase like transmembrane component AC612_14940 PF00392 Bacterial regulatory proteins, gntR family AC612_14940 PF07702 UTRA domain AC612_14955 PF07969 Amidohydrolase family AC612_14960 PF00221 Aromatic amino acid lyase AC612_14970 PF01175 Urocanase Rossmann-like domain AC612_14970 PF17391 Urocanase N-terminal domain AC612_14970 PF17392 Urocanase C-terminal domain AC612_14980 PF13360 PQQ-like domain AC612_14985 PF03989 DNA gyrase C-terminal domain, beta-propeller AC612_14985 PF00521 DNA gyrase/topoisomerase IV, subunit A AC612_14990 PF01008 Initiation factor 2 subunit family AC612_15000 PF00152 tRNA synthetases class II (D, K and N) AC612_15005 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AC612_15005 PF12826 Helix-hairpin-helix motif AC612_15005 PF01653 NAD-dependent DNA ligase adenylation domain AC612_15005 PF00533 BRCA1 C Terminus (BRCT) domain AC612_15005 PF03120 NAD-dependent DNA ligase OB-fold domain AC612_15010 PF00155 Aminotransferase class I and II AC612_15020 PF04354 ZipA, C-terminal FtsZ-binding domain AC612_15025 PF02463 RecF/RecN/SMC N terminal domain AC612_15035 PF03948 Ribosomal protein L9, C-terminal domain AC612_15035 PF01281 Ribosomal protein L9, N-terminal domain AC612_15040 PF01084 Ribosomal protein S18 AC612_15045 PF01250 Ribosomal protein S6 AC612_15050 PF01521 Iron-sulphur cluster biosynthesis AC612_15055 PF00152 tRNA synthetases class II (D, K and N) AC612_15055 PF01336 OB-fold nucleic acid binding domain AC612_15090 PF05598 Transposase domain (DUF772) AC612_15090 PF01609 Transposase DDE domain AC612_15095 PF00072 Response regulator receiver domain AC612_15095 PF00196 Bacterial regulatory proteins, luxR family AC612_15140 PF00484 Carbonic anhydrase AC612_15145 PF06052 3-hydroxyanthranilic acid dioxygenase AC612_15155 PF00266 Aminotransferase class-V AC612_15160 PF01494 FAD binding domain AC612_15165 PF08411 Exonuclease C-terminal AC612_15165 PF00929 Exonuclease AC612_15185 PF01513 ATP-NAD kinase AC612_15190 PF01170 Putative RNA methylase family UPF0020 AC612_15190 PF10672 S-adenosylmethionine-dependent methyltransferase AC612_15190 PF02926 THUMP domain AC612_15225 PF00581 Rhodanese-like domain AC612_15230 PF00293 NUDIX domain AC612_15235 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AC612_15235 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AC612_15240 PF00378 Enoyl-CoA hydratase/isomerase AC612_15250 PF00730 HhH-GPD superfamily base excision DNA repair protein AC612_15250 PF10576 Iron-sulfur binding domain of endonuclease III AC612_15250 PF00633 Helix-hairpin-helix motif AC612_15255 PF00916 Sulfate permease family AC612_15255 PF01740 STAS domain AC612_15260 PF00484 Carbonic anhydrase AC612_15275 PF12849 PBP superfamily domain AC612_15280 PF12849 PBP superfamily domain AC612_15285 PF00528 Binding-protein-dependent transport system inner membrane component AC612_15290 PF00528 Binding-protein-dependent transport system inner membrane component AC612_15295 PF00005 ABC transporter AC612_15300 PF01895 PhoU domain AC612_15310 PF00929 Exonuclease AC612_15320 PF00588 SpoU rRNA Methylase family AC612_15320 PF08032 RNA 2'-O ribose methyltransferase substrate binding AC612_15330 PF17876 Cold shock domain AC612_15330 PF08461 Ribonuclease R winged-helix domain AC612_15330 PF08206 Ribonuclease B OB domain AC612_15330 PF00773 RNB domain AC612_15330 PF00575 S1 RNA binding domain AC612_15345 PF02770 Acyl-CoA dehydrogenase, middle domain AC612_15345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC612_15345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC612_15350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC612_15350 PF02770 Acyl-CoA dehydrogenase, middle domain AC612_15350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC612_15355 PF01209 ubiE/COQ5 methyltransferase family AC612_15360 PF02574 Homocysteine S-methyltransferase AC612_15360 PF00809 Pterin binding enzyme AC612_15365 PF00809 Pterin binding enzyme AC612_15365 PF02607 B12 binding domain AC612_15365 PF02310 B12 binding domain AC612_15365 PF02965 Vitamin B12 dependent methionine synthase, activation domain AC612_15365 PF02574 Homocysteine S-methyltransferase AC612_15375 PF00294 pfkB family carbohydrate kinase AC612_15380 PF07690 Major Facilitator Superfamily AC612_15385 PF00356 Bacterial regulatory proteins, lacI family AC612_15400 PF04102 SlyX AC612_15405 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AC612_15405 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AC612_15405 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AC612_15410 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AC612_15410 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AC612_15415 PF00255 Glutathione peroxidase AC612_15420 PF00392 Bacterial regulatory proteins, gntR family AC612_15425 PF00005 ABC transporter AC612_15450 PF10415 Fumarase C C-terminus AC612_15450 PF00206 Lyase AC612_15455 PF00571 CBS domain AC612_15455 PF03471 Transporter associated domain AC612_15455 PF01595 Cyclin M transmembrane N-terminal domain AC612_15465 PF00206 Lyase AC612_15465 PF08328 Adenylosuccinate lyase C-terminal AC612_15480 PF08007 Cupin superfamily protein AC612_15490 PF16870 2-oxoglutarate dehydrogenase C-terminal AC612_15490 PF02779 Transketolase, pyrimidine binding domain AC612_15490 PF16078 2-oxoglutarate dehydrogenase N-terminus AC612_15490 PF00676 Dehydrogenase E1 component AC612_15495 PF00364 Biotin-requiring enzyme AC612_15495 PF02817 e3 binding domain AC612_15495 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AC612_15500 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AC612_15500 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC612_15505 PF03641 Possible lysine decarboxylase AC612_15510 PF01205 Uncharacterized protein family UPF0029 AC612_15515 PF00664 ABC transporter transmembrane region AC612_15515 PF00005 ABC transporter AC612_15520 PF03466 LysR substrate binding domain AC612_15520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC612_15525 PF00005 ABC transporter AC612_15525 PF00664 ABC transporter transmembrane region AC612_15525 PF03412 Peptidase C39 family AC612_15555 PF08543 Phosphomethylpyrimidine kinase AC612_15560 PF00684 DnaJ central domain AC612_15560 PF01556 DnaJ C terminal domain AC612_15560 PF00226 DnaJ domain AC612_15565 PF00012 Hsp70 protein AC612_15570 PF01025 GrpE AC612_15575 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding AC612_15575 PF01628 HrcA protein C terminal domain AC612_15580 PF02463 RecF/RecN/SMC N terminal domain AC612_15585 PF01475 Ferric uptake regulator family AC612_15590 PF04355 SmpA / OmlA family AC612_15595 PF03658 RnfH family Ubiquitin AC612_15600 PF03364 Polyketide cyclase / dehydrase and lipid transport AC612_15605 PF01668 SmpB protein AC612_15620 PF00872 Transposase, Mutator family AC612_15650 PF00872 Transposase, Mutator family AC612_15665 PF00990 Diguanylate cyclase, GGDEF domain AC612_15675 PF08448 PAS fold AC612_15675 PF00990 Diguanylate cyclase, GGDEF domain AC612_15680 PF02321 Outer membrane efflux protein AC612_15685 PF00106 short chain dehydrogenase AC612_15690 PF00873 AcrB/AcrD/AcrF family AC612_15695 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC612_15710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC612_15710 PF03466 LysR substrate binding domain AC612_15715 PF00691 OmpA family AC612_15715 PF05736 OprF membrane domain AC612_15720 PF00875 DNA photolyase AC612_15720 PF03441 FAD binding domain of DNA photolyase AC612_15725 PF00772 DnaB-like helicase N terminal domain AC612_15725 PF03796 DnaB-like helicase C terminal domain AC612_15730 PF03358 NADPH-dependent FMN reductase AC612_15735 PF00733 Asparagine synthase AC612_15735 PF13537 Glutamine amidotransferase domain AC612_15740 PF02798 Glutathione S-transferase, N-terminal domain AC612_15740 PF00043 Glutathione S-transferase, C-terminal domain AC612_15750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC612_15750 PF02770 Acyl-CoA dehydrogenase, middle domain AC612_15750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC612_15765 PF01026 TatD related DNase AC612_15770 PF00899 ThiF family AC612_15785 PF00313 'Cold-shock' DNA-binding domain AC612_15795 PF02253 Phospholipase A1 AC612_15800 PF00484 Carbonic anhydrase AC612_15810 PF05681 Fumarate hydratase (Fumerase) AC612_15810 PF05683 Fumarase C-terminus AC612_15815 PF00005 ABC transporter AC612_15820 PF00175 Oxidoreductase NAD-binding domain AC612_15820 PF00970 Oxidoreductase FAD-binding domain AC612_15825 PF00255 Glutathione peroxidase AC612_15830 PF01432 Peptidase family M3 AC612_15835 PF12802 MarR family AC612_15860 PF00854 POT family AC612_15875 PF01915 Glycosyl hydrolase family 3 C-terminal domain AC612_15875 PF00933 Glycosyl hydrolase family 3 N terminal domain AC612_15875 PF14310 Fibronectin type III-like domain AC612_15885 PF07690 Major Facilitator Superfamily AC612_15890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC612_15890 PF00529 HlyD membrane-fusion protein of T1SS AC612_15895 PF02321 Outer membrane efflux protein AC612_15910 PF00521 DNA gyrase/topoisomerase IV, subunit A AC612_15910 PF03989 DNA gyrase C-terminal domain, beta-propeller AC612_15915 PF05724 Thiopurine S-methyltransferase (TPMT) AC612_15920 PF00210 Ferritin-like domain AC612_15930 PF07715 TonB-dependent Receptor Plug Domain AC612_15930 PF00593 TonB dependent receptor AC612_15940 PF13537 Glutamine amidotransferase domain AC612_15940 PF00733 Asparagine synthase AC612_15945 PF07687 Peptidase dimerisation domain AC612_15945 PF01546 Peptidase family M20/M25/M40 AC612_15950 PF03960 ArsC family AC612_15955 PF14602 Hexapeptide repeat of succinyl-transferase AC612_15955 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AC612_15955 PF00132 Bacterial transferase hexapeptide (six repeats) AC612_15960 PF01966 HD domain AC612_15960 PF01909 Nucleotidyltransferase domain AC612_15960 PF08335 GlnD PII-uridylyltransferase AC612_15965 PF00557 Metallopeptidase family M24 AC612_16000 PF00318 Ribosomal protein S2 AC612_16005 PF00889 Elongation factor TS AC612_16010 PF00990 Diguanylate cyclase, GGDEF domain AC612_16010 PF00072 Response regulator receiver domain AC612_16015 PF00696 Amino acid kinase family AC612_16020 PF01765 Ribosome recycling factor AC612_16025 PF01255 Putative undecaprenyl diphosphate synthase AC612_16035 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AC612_16035 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AC612_16035 PF13288 DXP reductoisomerase C-terminal domain AC612_16040 PF17820 PDZ domain AC612_16040 PF02163 Peptidase family M50 AC612_16045 PF01103 Surface antigen AC612_16045 PF07244 Surface antigen variable number repeat AC612_16055 PF00132 Bacterial transferase hexapeptide (six repeats) AC612_16055 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AC612_16060 PF07977 FabA-like domain AC612_16065 PF00132 Bacterial transferase hexapeptide (six repeats) AC612_16065 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AC612_16070 PF02684 Lipid-A-disaccharide synthetase AC612_16075 PF01351 Ribonuclease HII AC612_16080 PF01336 OB-fold nucleic acid binding domain AC612_16080 PF02811 PHP domain AC612_16080 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AC612_16080 PF07733 Bacterial DNA polymerase III alpha NTPase domain AC612_16080 PF14579 Helix-hairpin-helix motif AC612_16085 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AC612_16120 PF03551 Transcriptional regulator PadR-like family AC612_16145 PF02592 Putative vitamin uptake transporter AC612_16155 PF02574 Homocysteine S-methyltransferase AC612_16160 PF00324 Amino acid permease AC612_16165 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AC612_16170 PF13732 Domain of unknown function (DUF4162) AC612_16170 PF00005 ABC transporter AC612_16180 PF05598 Transposase domain (DUF772) AC612_16180 PF01609 Transposase DDE domain AC612_16195 PF01588 Putative tRNA binding domain AC612_16195 PF09334 tRNA synthetases class I (M) AC612_16225 PF04542 Sigma-70 region 2 AC612_16225 PF04545 Sigma-70, region 4 AC612_16270 PF01042 Endoribonuclease L-PSP AC612_16280 PF03706 Lysylphosphatidylglycerol synthase TM region AC612_16280 PF09924 Uncharacterised conserved protein (DUF2156) AC612_16315 PF07690 Major Facilitator Superfamily AC612_16320 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AC612_16325 PF03831 PhnA domain AC612_16325 PF08274 PhnA Zinc-Ribbon AC612_16335 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AC612_16355 PF00872 Transposase, Mutator family AC612_16360 PF01258 Prokaryotic dksA/traR C4-type zinc finger AC612_16370 PF07043 Protein of unknown function (DUF1328) AC612_16375 PF01863 Protein of unknown function DUF45 AC612_16380 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AC612_16380 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AC612_16385 PF03797 Autotransporter beta-domain AC612_16385 PF12951 Passenger-associated-transport-repeat AC612_16385 PF00082 Subtilase family AC612_16390 PF00108 Thiolase, N-terminal domain AC612_16390 PF02803 Thiolase, C-terminal domain AC612_16405 PF00072 Response regulator receiver domain AC612_16405 PF00990 Diguanylate cyclase, GGDEF domain AC612_16420 PF01068 ATP dependent DNA ligase domain AC612_16420 PF04675 DNA ligase N terminus AC612_16420 PF04679 ATP dependent DNA ligase C terminal region AC612_16430 PF04675 DNA ligase N terminus AC612_16430 PF01068 ATP dependent DNA ligase domain AC612_16430 PF04679 ATP dependent DNA ligase C terminal region AC612_16435 PF00271 Helicase conserved C-terminal domain AC612_16435 PF08494 DEAD/H associated AC612_16435 PF00270 DEAD/DEAH box helicase AC612_16445 PF01494 FAD binding domain AC612_16450 PF00313 'Cold-shock' DNA-binding domain AC612_16455 PF01048 Phosphorylase superfamily AC612_16465 PF00933 Glycosyl hydrolase family 3 N terminal domain AC612_16470 PF04244 Deoxyribodipyrimidine photo-lyase-related protein AC612_16475 PF01593 Flavin containing amine oxidoreductase AC612_16480 PF01323 DSBA-like thioredoxin domain AC612_16490 PF05958 tRNA (Uracil-5-)-methyltransferase AC612_16500 PF11967 Recombination protein O N terminal AC612_16500 PF02565 Recombination protein O C terminal AC612_16505 PF07650 KH domain AC612_16505 PF01926 50S ribosome-binding GTPase AC612_16510 PF14622 Ribonuclease-III-like AC612_16510 PF00035 Double-stranded RNA binding motif AC612_16520 PF10502 Signal peptidase, peptidase S26 AC612_16525 PF00679 Elongation factor G C-terminus AC612_16525 PF00009 Elongation factor Tu GTP binding domain AC612_16525 PF03144 Elongation factor Tu domain 2 AC612_16525 PF06421 GTP-binding protein LepA C-terminus AC612_16530 PF13180 PDZ domain AC612_16540 PF04542 Sigma-70 region 2 AC612_16540 PF08281 Sigma-70, region 4 AC612_16545 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AC612_16545 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AC612_16545 PF00378 Enoyl-CoA hydratase/isomerase AC612_16555 PF05598 Transposase domain (DUF772) AC612_16555 PF01609 Transposase DDE domain AC612_16565 PF00989 PAS fold AC612_16565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_16565 PF11808 Phosphate regulon sensor protein PhoR AC612_16565 PF00512 His Kinase A (phospho-acceptor) domain AC612_16570 PF00072 Response regulator receiver domain AC612_16570 PF00486 Transcriptional regulatory protein, C terminal AC612_16580 PF08443 RimK-like ATP-grasp domain AC612_16580 PF18030 RimK PreATP-grasp domain AC612_16585 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AC612_16585 PF00128 Alpha amylase, catalytic domain AC612_16590 PF05598 Transposase domain (DUF772) AC612_16590 PF01609 Transposase DDE domain AC612_16615 PF00872 Transposase, Mutator family AC612_16630 PF05598 Transposase domain (DUF772) AC612_16630 PF01609 Transposase DDE domain AC612_16640 PF05598 Transposase domain (DUF772) AC612_16640 PF01609 Transposase DDE domain AC612_16655 PF05598 Transposase domain (DUF772) AC612_16655 PF01609 Transposase DDE domain AC612_16670 PF04002 RadC-like JAB domain AC612_16675 PF00872 Transposase, Mutator family AC612_16685 PF00872 Transposase, Mutator family AC612_16715 PF04610 TrbL/VirB6 plasmid conjugal transfer protein AC612_16735 PF00872 Transposase, Mutator family AC612_16740 PF00872 Transposase, Mutator family AC612_16770 PF00872 Transposase, Mutator family AC612_16780 PF00872 Transposase, Mutator family AC612_16790 PF00872 Transposase, Mutator family AC612_16825 PF03797 Autotransporter beta-domain AC612_16825 PF00657 GDSL-like Lipase/Acylhydrolase AC612_16835 PF05690 Thiazole biosynthesis protein ThiG AC612_16840 PF02390 Putative methyltransferase AC612_16845 PF02080 TrkA-C domain AC612_16845 PF03600 Citrate transporter AC612_16865 PF01557 Fumarylacetoacetate (FAA) hydrolase family AC612_16870 PF01741 Large-conductance mechanosensitive channel, MscL AC612_16885 PF00356 Bacterial regulatory proteins, lacI family AC612_16895 PF02837 Glycosyl hydrolases family 2, sugar binding domain AC612_16895 PF00703 Glycosyl hydrolases family 2 AC612_16895 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain AC612_16900 PF10566 Glycoside hydrolase 97 AC612_16900 PF14508 Glycosyl-hydrolase 97 N-terminal AC612_16900 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation AC612_16905 PF00135 Carboxylesterase family AC612_16910 PF08032 RNA 2'-O ribose methyltransferase substrate binding AC612_16910 PF00588 SpoU rRNA Methylase family AC612_16920 PF11838 ERAP1-like C-terminal domain AC612_16920 PF01433 Peptidase family M1 domain AC612_16925 PF00873 AcrB/AcrD/AcrF family AC612_16930 PF00529 HlyD membrane-fusion protein of T1SS AC612_16930 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC612_16935 PF05598 Transposase domain (DUF772) AC612_16935 PF01609 Transposase DDE domain AC612_16940 PF00009 Elongation factor Tu GTP binding domain AC612_16945 PF01507 Phosphoadenosine phosphosulfate reductase family AC612_16950 PF00175 Oxidoreductase NAD-binding domain AC612_16950 PF00258 Flavodoxin AC612_16950 PF00667 FAD binding domain AC612_16955 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AC612_16955 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AC612_16960 PF01507 Phosphoadenosine phosphosulfate reductase family AC612_16965 PF01609 Transposase DDE domain AC612_16965 PF05598 Transposase domain (DUF772) AC612_16985 PF00072 Response regulator receiver domain AC612_16985 PF00512 His Kinase A (phospho-acceptor) domain AC612_16985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_16985 PF01627 Hpt domain AC612_16995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC612_16995 PF03466 LysR substrate binding domain AC612_17000 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AC612_17000 PF10414 Sirohaem synthase dimerisation region AC612_17000 PF14824 Sirohaem biosynthesis protein central AC612_17005 PF00291 Pyridoxal-phosphate dependent enzyme AC612_17015 PF01661 Macro domain AC612_17020 PF00274 Fructose-bisphosphate aldolase class-I AC612_17025 PF02887 Pyruvate kinase, alpha/beta domain AC612_17025 PF00224 Pyruvate kinase, barrel domain AC612_17035 PF00162 Phosphoglycerate kinase AC612_17055 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AC612_17055 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AC612_17065 PF03922 OmpW family AC612_17070 PF03922 OmpW family AC612_17080 PF00753 Metallo-beta-lactamase superfamily AC612_17080 PF04273 Putative phosphatase (DUF442) AC612_17090 PF00528 Binding-protein-dependent transport system inner membrane component AC612_17095 PF00005 ABC transporter AC612_17095 PF03459 TOBE domain AC612_17130 PF01476 LysM domain AC612_17130 PF03734 L,D-transpeptidase catalytic domain AC612_17135 PF01551 Peptidase family M23 AC612_17135 PF04225 Opacity-associated protein A LysM-like domain AC612_17140 PF07715 TonB-dependent Receptor Plug Domain AC612_17140 PF00593 TonB dependent receptor AC612_17160 PF02779 Transketolase, pyrimidine binding domain AC612_17160 PF02780 Transketolase, C-terminal domain AC612_17160 PF00456 Transketolase, thiamine diphosphate binding domain AC612_17165 PF00375 Sodium:dicarboxylate symporter family AC612_17175 PF00092 von Willebrand factor type A domain AC612_17175 PF07584 Aerotolerance regulator N-terminal AC612_17195 PF07726 ATPase family associated with various cellular activities (AAA) AC612_17195 PF17863 AAA lid domain AC612_17200 PF11741 AMIN domain AC612_17200 PF00263 Bacterial type II and III secretion system protein AC612_17200 PF03958 Bacterial type II/III secretion system short domain AC612_17200 PF07660 Secretin and TonB N terminus short domain AC612_17225 PF17092 Penicillin-binding protein OB-like domain AC612_17225 PF00912 Transglycosylase AC612_17225 PF00905 Penicillin binding protein transpeptidase domain AC612_17235 PF00285 Citrate synthase, C-terminal domain AC612_17240 PF01197 Ribosomal protein L31 AC612_17245 PF01156 Inosine-uridine preferring nucleoside hydrolase AC612_17250 PF00270 DEAD/DEAH box helicase AC612_17250 PF00271 Helicase conserved C-terminal domain AC612_17250 PF17191 RecG wedge domain AC612_17255 PF01042 Endoribonuclease L-PSP AC612_17260 PF08666 SAF domain AC612_17260 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AC612_17265 PF03573 outer membrane porin, OprD family AC612_17270 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AC612_17270 PF13378 Enolase C-terminal domain-like AC612_17275 PF07690 Major Facilitator Superfamily AC612_17280 PF00171 Aldehyde dehydrogenase family AC612_17285 PF00701 Dihydrodipicolinate synthetase family AC612_17290 PF03466 LysR substrate binding domain AC612_17290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC612_17295 PF13291 ACT domain AC612_17295 PF04607 Region found in RelA / SpoT proteins AC612_17295 PF02824 TGS domain AC612_17300 PF01192 RNA polymerase Rpb6 AC612_17305 PF00625 Guanylate kinase AC612_17310 PF08340 Domain of unknown function (DUF1732) AC612_17310 PF03755 YicC-like family, N-terminal region AC612_17315 PF01138 3' exoribonuclease family, domain 1 AC612_17315 PF03725 3' exoribonuclease family, domain 2 AC612_17325 PF01725 Ham1 family AC612_17330 PF06969 HemN C-terminal domain AC612_17330 PF04055 Radical SAM superfamily AC612_17345 PF00557 Metallopeptidase family M24 AC612_17355 PF05195 Aminopeptidase P, N-terminal domain AC612_17355 PF00557 Metallopeptidase family M24 AC612_17360 PF03695 Uncharacterised protein family (UPF0149) AC612_17370 PF05164 Cell division protein ZapA AC612_17375 PF01812 5-formyltetrahydrofolate cyclo-ligase family AC612_17385 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AC612_17395 PF13369 Transglutaminase-like superfamily AC612_17400 PF00301 Rubredoxin AC612_17405 PF02581 Thiamine monophosphate synthase AC612_17415 PF00202 Aminotransferase class-III AC612_17420 PF17874 MalT-like TPR region AC612_17420 PF00196 Bacterial regulatory proteins, luxR family AC612_17425 PF00127 Copper binding proteins, plastocyanin/azurin family AC612_17430 PF00155 Aminotransferase class I and II AC612_17440 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AC612_17440 PF00034 Cytochrome c AC612_17445 PF01593 Flavin containing amine oxidoreductase AC612_17460 PF00202 Aminotransferase class-III AC612_17465 PF00520 Ion transport protein AC612_17465 PF00027 Cyclic nucleotide-binding domain AC612_17480 PF01569 PAP2 superfamily AC612_17485 PF01062 Bestrophin, RFP-TM, chloride channel AC612_17495 PF02875 Mur ligase family, glutamate ligase domain AC612_17495 PF08245 Mur ligase middle domain AC612_17495 PF01225 Mur ligase family, catalytic domain AC612_17505 PF00365 Phosphofructokinase AC612_17515 PF03030 Inorganic H+ pyrophosphatase AC612_17525 PF00719 Inorganic pyrophosphatase AC612_17535 PF00593 TonB dependent receptor AC612_17535 PF07715 TonB-dependent Receptor Plug Domain AC612_17540 PF00872 Transposase, Mutator family AC612_17555 PF01964 Radical SAM ThiC family AC612_17555 PF13667 ThiC-associated domain AC612_17560 PF00593 TonB dependent receptor AC612_17560 PF07715 TonB-dependent Receptor Plug Domain AC612_17565 PF00672 HAMP domain AC612_17565 PF02203 Tar ligand binding domain homologue AC612_17565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC612_17575 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AC612_17575 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AC612_17580 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AC612_17580 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AC612_17580 PF00205 Thiamine pyrophosphate enzyme, central domain AC612_17590 PF00291 Pyridoxal-phosphate dependent enzyme AC612_17595 PF00682 HMGL-like AC612_17595 PF08502 LeuA allosteric (dimerisation) domain AC612_17600 PF00180 Isocitrate/isopropylmalate dehydrogenase AC612_17605 PF00694 Aconitase C-terminal domain AC612_17610 PF00330 Aconitase family (aconitate hydratase) AC612_17615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC612_17620 PF00990 Diguanylate cyclase, GGDEF domain AC612_17620 PF17151 Periplasmic sensor domain AC612_17635 PF02321 Outer membrane efflux protein AC612_17640 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AC612_17645 PF03279 Bacterial lipid A biosynthesis acyltransferase AC612_17670 PF00390 Malic enzyme, N-terminal domain AC612_17670 PF03949 Malic enzyme, NAD binding domain AC612_17670 PF01515 Phosphate acetyl/butaryl transferase AC612_17675 PF00375 Sodium:dicarboxylate symporter family AC612_17685 PF02743 Cache domain AC612_17685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_17685 PF00512 His Kinase A (phospho-acceptor) domain AC612_17690 PF07690 Major Facilitator Superfamily AC612_17700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC612_17700 PF03466 LysR substrate binding domain AC612_17710 PF00248 Aldo/keto reductase family AC612_17725 PF00072 Response regulator receiver domain AC612_17725 PF00196 Bacterial regulatory proteins, luxR family AC612_17735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_17735 PF08521 Two-component sensor kinase N-terminal AC612_17735 PF00512 His Kinase A (phospho-acceptor) domain AC612_17740 PF00486 Transcriptional regulatory protein, C terminal AC612_17740 PF00072 Response regulator receiver domain AC612_17750 PF03600 Citrate transporter AC612_17755 PF00106 short chain dehydrogenase AC612_17760 PF00356 Bacterial regulatory proteins, lacI family AC612_17775 PF00128 Alpha amylase, catalytic domain AC612_17790 PF03193 RsgA GTPase AC612_17795 PF00155 Aminotransferase class I and II AC612_17810 PF01522 Polysaccharide deacetylase AC612_17815 PF00462 Glutaredoxin AC612_17830 PF01979 Amidohydrolase family AC612_17835 PF01979 Amidohydrolase family AC612_17855 PF01609 Transposase DDE domain AC612_17855 PF05598 Transposase domain (DUF772) AC612_17860 PF02645 Uncharacterised protein, DegV family COG1307 AC612_17865 PF01327 Polypeptide deformylase AC612_17870 PF03960 ArsC family AC612_17885 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) AC612_17890 PF01270 Glycosyl hydrolases family 8 AC612_17895 PF03170 Bacterial cellulose synthase subunit AC612_17900 PF00535 Glycosyl transferase family 2 AC612_17900 PF03552 Cellulose synthase AC612_17900 PF07238 PilZ domain AC612_17915 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AC612_17915 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AC612_17965 PF07702 UTRA domain AC612_17965 PF00392 Bacterial regulatory proteins, gntR family AC612_17980 PF03958 Bacterial type II/III secretion system short domain AC612_17980 PF00263 Bacterial type II and III secretion system protein AC612_17990 PF10741 Type II secretion system (T2SS), protein M subtype b AC612_17995 PF05137 Fimbrial assembly protein (PilN) AC612_18000 PF03934 Type II secretion system (T2SS), protein K AC612_18010 PF07963 Prokaryotic N-terminal methylation motif AC612_18015 PF12019 Type II transport protein GspH AC612_18020 PF08334 Type II secretion system (T2SS), protein G AC612_18025 PF00482 Type II secretion system (T2SS), protein F AC612_18030 PF00437 Type II/IV secretion system protein AC612_18030 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AC612_18035 PF04151 Bacterial pre-peptidase C-terminal domain AC612_18035 PF00082 Subtilase family AC612_18045 PF00082 Subtilase family AC612_18045 PF04151 Bacterial pre-peptidase C-terminal domain AC612_18050 PF05662 Coiled stalk of trimeric autotransporter adhesin AC612_18050 PF13018 Extended Signal Peptide of Type V secretion system AC612_18050 PF03895 YadA-like membrane anchor domain AC612_18050 PF05658 Head domain of trimeric autotransporter adhesin AC612_18060 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AC612_18060 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AC612_18060 PF02769 AIR synthase related protein, C-terminal domain AC612_18065 PF13098 Thioredoxin-like domain AC612_18065 PF10411 Disulfide bond isomerase protein N-terminus AC612_18070 PF00589 Phage integrase family AC612_18070 PF02899 Phage integrase, N-terminal SAM-like domain AC612_18085 PF03739 Lipopolysaccharide export system permease LptF/LptG AC612_18095 PF02789 Cytosol aminopeptidase family, N-terminal domain AC612_18095 PF00883 Cytosol aminopeptidase family, catalytic domain AC612_18110 PF00133 tRNA synthetases class I (I, L, M and V) AC612_18110 PF08264 Anticodon-binding domain of tRNA AC612_18110 PF10458 Valyl tRNA synthetase tRNA binding arm AC612_18115 PF00593 TonB dependent receptor AC612_18115 PF07715 TonB-dependent Receptor Plug Domain AC612_18120 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AC612_18120 PF01464 Transglycosylase SLT domain AC612_18130 PF00872 Transposase, Mutator family AC612_18155 PF01066 CDP-alcohol phosphatidyltransferase AC612_18165 PF03129 Anticodon binding domain AC612_18165 PF04073 Aminoacyl-tRNA editing domain AC612_18165 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AC612_18170 PF00816 H-NS histone family AC612_18180 PF02405 Permease MlaE AC612_18185 PF00005 ABC transporter AC612_18190 PF03886 ABC-type transport auxiliary lipoprotein component AC612_18190 PF02470 MlaD protein AC612_18210 PF01144 Coenzyme A transferase AC612_18215 PF01144 Coenzyme A transferase AC612_18220 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AC612_18220 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AC612_18220 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AC612_18220 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AC612_18225 PF01050 Mannose-6-phosphate isomerase AC612_18225 PF00483 Nucleotidyl transferase AC612_18230 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AC612_18230 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AC612_18230 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AC612_18235 PF04321 RmlD substrate binding domain AC612_18240 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AC612_18245 PF00483 Nucleotidyl transferase AC612_18250 PF16363 GDP-mannose 4,6 dehydratase AC612_18255 PF01012 Electron transfer flavoprotein domain AC612_18260 PF00766 Electron transfer flavoprotein FAD-binding domain AC612_18260 PF01012 Electron transfer flavoprotein domain AC612_18270 PF00535 Glycosyl transferase family 2 AC612_18295 PF16363 GDP-mannose 4,6 dehydratase AC612_18300 PF16363 GDP-mannose 4,6 dehydratase AC612_18305 PF00534 Glycosyl transferases group 1 AC612_18305 PF13477 Glycosyl transferase 4-like AC612_18310 PF00069 Protein kinase domain AC612_18310 PF13847 Methyltransferase domain AC612_18315 PF00005 ABC transporter AC612_18325 PF13439 Glycosyltransferase Family 4 AC612_18325 PF00534 Glycosyl transferases group 1 AC612_18330 PF01053 Cys/Met metabolism PLP-dependent enzyme AC612_18335 PF00571 CBS domain AC612_18335 PF00291 Pyridoxal-phosphate dependent enzyme AC612_18355 PF00437 Type II/IV secretion system protein AC612_18360 PF14497 Glutathione S-transferase, C-terminal domain AC612_18360 PF02798 Glutathione S-transferase, N-terminal domain AC612_18370 PF00270 DEAD/DEAH box helicase AC612_18370 PF00271 Helicase conserved C-terminal domain AC612_18380 PF07715 TonB-dependent Receptor Plug Domain AC612_18380 PF00593 TonB dependent receptor AC612_18385 PF01242 6-pyruvoyl tetrahydropterin synthase AC612_18425 PF13185 GAF domain AC612_18435 PF00756 Putative esterase AC612_18440 PF00593 TonB dependent receptor AC612_18440 PF07715 TonB-dependent Receptor Plug Domain AC612_18445 PF13419 Haloacid dehalogenase-like hydrolase AC612_18450 PF11799 impB/mucB/samB family C-terminal domain AC612_18450 PF00817 impB/mucB/samB family AC612_18455 PF07977 FabA-like domain AC612_18460 PF00109 Beta-ketoacyl synthase, N-terminal domain AC612_18460 PF02801 Beta-ketoacyl synthase, C-terminal domain AC612_18470 PF01432 Peptidase family M3 AC612_18485 PF07732 Multicopper oxidase AC612_18485 PF07731 Multicopper oxidase AC612_18485 PF00394 Multicopper oxidase AC612_18490 PF05275 Copper resistance protein B precursor (CopB) AC612_18495 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AC612_18520 PF01380 SIS domain AC612_18525 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC612_18530 PF00005 ABC transporter AC612_18535 PF02687 FtsX-like permease family AC612_18535 PF12704 MacB-like periplasmic core domain AC612_18540 PF02687 FtsX-like permease family AC612_18540 PF00005 ABC transporter AC612_18540 PF12704 MacB-like periplasmic core domain AC612_18550 PF00072 Response regulator receiver domain AC612_18550 PF02954 Bacterial regulatory protein, Fis family AC612_18550 PF00158 Sigma-54 interaction domain AC612_18555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_18555 PF00512 His Kinase A (phospho-acceptor) domain AC612_18560 PF12804 MobA-like NTP transferase domain AC612_18560 PF14602 Hexapeptide repeat of succinyl-transferase AC612_18560 PF00132 Bacterial transferase hexapeptide (six repeats) AC612_18580 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AC612_18580 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AC612_18585 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AC612_18585 PF02874 ATP synthase alpha/beta family, beta-barrel domain AC612_18590 PF00231 ATP synthase AC612_18595 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AC612_18595 PF00306 ATP synthase alpha/beta chain, C terminal domain AC612_18595 PF02874 ATP synthase alpha/beta family, beta-barrel domain AC612_18600 PF00213 ATP synthase delta (OSCP) subunit AC612_18605 PF00430 ATP synthase B/B' CF(0) AC612_18610 PF00137 ATP synthase subunit C AC612_18615 PF00119 ATP synthase A chain AC612_18635 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AC612_18635 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC612_18645 PF02817 e3 binding domain AC612_18645 PF00364 Biotin-requiring enzyme AC612_18645 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AC612_18680 PF03180 NLPA lipoprotein AC612_18685 PF00528 Binding-protein-dependent transport system inner membrane component AC612_18690 PF09383 NIL domain AC612_18690 PF00005 ABC transporter AC612_18695 PF00892 EamA-like transporter family AC612_18700 PF04461 Protein of unknown function (DUF520) AC612_18710 PF18415 Histidine kinase receptor ArcB trans-membrane domain AC612_18710 PF00989 PAS fold AC612_18710 PF00512 His Kinase A (phospho-acceptor) domain AC612_18710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_18710 PF01627 Hpt domain AC612_18710 PF00072 Response regulator receiver domain AC612_18745 PF01479 S4 domain AC612_18745 PF00849 RNA pseudouridylate synthase AC612_18750 PF08468 Methyltransferase small domain N-terminal AC612_18750 PF05175 Methyltransferase small domain AC612_18760 PF07995 Glucose / Sorbosone dehydrogenase AC612_18770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_18770 PF00512 His Kinase A (phospho-acceptor) domain AC612_18770 PF00989 PAS fold AC612_18790 PF00842 Alanine racemase, C-terminal domain AC612_18790 PF01168 Alanine racemase, N-terminal domain AC612_18795 PF01266 FAD dependent oxidoreductase AC612_18800 PF01037 Lrp/AsnC ligand binding domain AC612_18810 PF01641 SelR domain AC612_18820 PF01618 MotA/TolQ/ExbB proton channel family AC612_18825 PF00691 OmpA family AC612_18825 PF13677 Membrane MotB of proton-channel complex MotA/MotB AC612_18855 PF00005 ABC transporter AC612_18860 PF00999 Sodium/hydrogen exchanger family AC612_18865 PF02469 Fasciclin domain AC612_18870 PF03167 Uracil DNA glycosylase superfamily AC612_18880 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AC612_18890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC612_18890 PF03466 LysR substrate binding domain AC612_18895 PF03358 NADPH-dependent FMN reductase AC612_18900 PF00248 Aldo/keto reductase family AC612_18910 PF01431 Peptidase family M13 AC612_18910 PF05649 Peptidase family M13 AC612_18925 PF13520 Amino acid permease AC612_18935 PF00072 Response regulator receiver domain AC612_18935 PF04397 LytTr DNA-binding domain AC612_18940 PF06580 Histidine kinase AC612_18940 PF00672 HAMP domain AC612_18940 PF02743 Cache domain AC612_18940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_18955 PF05974 Domain of unknown function (DUF892) AC612_18960 PF05067 Manganese containing catalase AC612_18980 PF08448 PAS fold AC612_18980 PF03705 CheR methyltransferase, all-alpha domain AC612_18980 PF01739 CheR methyltransferase, SAM binding domain AC612_18980 PF01339 CheB methylesterase AC612_18995 PF00158 Sigma-54 interaction domain AC612_18995 PF02954 Bacterial regulatory protein, Fis family AC612_18995 PF00072 Response regulator receiver domain AC612_19005 PF01654 Cytochrome bd terminal oxidase subunit I AC612_19010 PF02322 Cytochrome bd terminal oxidase subunit II AC612_19030 PF16363 GDP-mannose 4,6 dehydratase AC612_19040 PF03275 UDP-galactopyranose mutase AC612_19050 PF00005 ABC transporter AC612_19050 PF00664 ABC transporter transmembrane region AC612_19065 PF08240 Alcohol dehydrogenase GroES-like domain AC612_19065 PF00107 Zinc-binding dehydrogenase AC612_19065 PF13823 Alcohol dehydrogenase GroES-associated AC612_19110 PF00593 TonB dependent receptor AC612_19110 PF07715 TonB-dependent Receptor Plug Domain AC612_19125 PF00005 ABC transporter AC612_19135 PF03466 LysR substrate binding domain AC612_19135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC612_19140 PF01042 Endoribonuclease L-PSP AC612_19170 PF03466 LysR substrate binding domain AC612_19170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC612_19175 PF02525 Flavodoxin-like fold AC612_19205 PF00916 Sulfate permease family AC612_19205 PF01740 STAS domain AC612_19215 PF00557 Metallopeptidase family M24 AC612_19240 PF05598 Transposase domain (DUF772) AC612_19240 PF01609 Transposase DDE domain AC612_19255 PF05598 Transposase domain (DUF772) AC612_19255 PF01609 Transposase DDE domain AC612_19265 PF00872 Transposase, Mutator family AC612_19280 PF00872 Transposase, Mutator family AC612_19300 PF04539 Sigma-70 region 3 AC612_19300 PF00140 Sigma-70 factor, region 1.2 AC612_19300 PF03979 Sigma-70 factor, region 1.1 AC612_19300 PF04546 Sigma-70, non-essential region AC612_19300 PF04542 Sigma-70 region 2 AC612_19300 PF04545 Sigma-70, region 4 AC612_19305 PF02580 D-Tyr-tRNA(Tyr) deacylase AC612_19310 PF03279 Bacterial lipid A biosynthesis acyltransferase AC612_19325 PF00925 GTP cyclohydrolase II AC612_19345 PF00535 Glycosyl transferase family 2 AC612_19360 PF01189 16S rRNA methyltransferase RsmB/F AC612_19360 PF01029 NusB family AC612_19365 PF02911 Formyl transferase, C-terminal domain AC612_19365 PF00551 Formyl transferase AC612_19370 PF01327 Polypeptide deformylase AC612_19375 PF01476 LysM domain AC612_19380 PF17782 DprA winged helix domain AC612_19380 PF02481 DNA recombination-mediator protein A AC612_19385 PF04361 Protein of unknown function (DUF494) AC612_19390 PF07963 Prokaryotic N-terminal methylation motif AC612_19390 PF00114 Pilin (bacterial filament) AC612_19400 PF01131 DNA topoisomerase AC612_19400 PF01751 Toprim domain AC612_19400 PF13368 Topoisomerase C-terminal repeat AC612_19405 PF01300 Telomere recombination AC612_19435 PF01343 Peptidase family S49 AC612_19440 PF01554 MatE AC612_19460 PF17764 3′ DNA-binding domain (3′BD) AC612_19460 PF18074 Primosomal protein N C-terminal domain AC612_19460 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AC612_19460 PF00270 DEAD/DEAH box helicase AC612_19460 PF00271 Helicase conserved C-terminal domain AC612_19465 PF13417 Glutathione S-transferase, N-terminal domain AC612_19465 PF00043 Glutathione S-transferase, C-terminal domain AC612_19480 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC612_19490 PF04542 Sigma-70 region 2 AC612_19490 PF04545 Sigma-70, region 4 AC612_19495 PF03167 Uracil DNA glycosylase superfamily AC612_19500 PF01339 CheB methylesterase AC612_19500 PF00072 Response regulator receiver domain AC612_19505 PF18075 FtsX extracellular domain AC612_19510 PF00005 ABC transporter AC612_19515 PF12300 ATP-dependent RNA helicase RhlB AC612_19515 PF00270 DEAD/DEAH box helicase AC612_19515 PF00271 Helicase conserved C-terminal domain AC612_19520 PF00085 Thioredoxin AC612_19525 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AC612_19525 PF07498 Rho termination factor, N-terminal domain AC612_19525 PF07497 Rho termination factor, RNA-binding domain AC612_19530 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AC612_19535 PF03466 LysR substrate binding domain AC612_19535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC612_19545 PF03971 Monomeric isocitrate dehydrogenase AC612_19555 PF04972 BON domain AC612_19555 PF01476 LysM domain AC612_19560 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AC612_19560 PF14489 QueF-like protein AC612_19565 PF07687 Peptidase dimerisation domain AC612_19565 PF01546 Peptidase family M20/M25/M40 AC612_19570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC612_19575 PF00873 AcrB/AcrD/AcrF family AC612_19580 PF00873 AcrB/AcrD/AcrF family AC612_19595 PF07063 Domain of unknown function (DUF1338) AC612_19635 PF01427 D-ala-D-ala dipeptidase AC612_19640 PF01510 N-acetylmuramoyl-L-alanine amidase AC612_19650 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AC612_19650 PF13378 Enolase C-terminal domain-like AC612_19660 PF13520 Amino acid permease AC612_19680 PF05360 yiaA/B two helix domain AC612_19695 PF00872 Transposase, Mutator family AC612_19700 PF07995 Glucose / Sorbosone dehydrogenase AC612_19705 PF01915 Glycosyl hydrolase family 3 C-terminal domain AC612_19705 PF00933 Glycosyl hydrolase family 3 N terminal domain AC612_19705 PF14310 Fibronectin type III-like domain AC612_19710 PF02152 Dihydroneopterin aldolase AC612_19715 PF00814 Glycoprotease family AC612_19720 PF01165 Ribosomal protein S21 AC612_19725 PF09424 Yqey-like protein AC612_19730 PF03631 Virulence factor BrkB AC612_19735 PF01807 CHC2 zinc finger AC612_19735 PF08275 DNA primase catalytic core, N-terminal domain AC612_19735 PF10410 DnaB-helicase binding domain of primase AC612_19735 PF08278 DNA primase DnaG DnaB-binding AC612_19740 PF13593 SBF-like CPA transporter family (DUF4137) AC612_19750 PF01040 UbiA prenyltransferase family AC612_19775 PF00510 Cytochrome c oxidase subunit III AC612_19780 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AC612_19790 PF00115 Cytochrome C and Quinol oxidase polypeptide I AC612_19795 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AC612_19795 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AC612_19805 PF00171 Aldehyde dehydrogenase family AC612_19805 PF14850 DNA-binding domain of Proline dehydrogenase AC612_19805 PF01619 Proline dehydrogenase AC612_19805 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AC612_19840 PF00579 tRNA synthetases class I (W and Y) AC612_19845 PF01551 Peptidase family M23 AC612_19845 PF04225 Opacity-associated protein A LysM-like domain AC612_19850 PF03702 Anhydro-N-acetylmuramic acid kinase AC612_19860 PF07690 Major Facilitator Superfamily AC612_19865 PF03372 Endonuclease/Exonuclease/phosphatase family AC612_19870 PF00156 Phosphoribosyl transferase domain AC612_19880 PF13614 AAA domain AC612_19885 PF17762 HTH domain found in ParB protein AC612_19885 PF02195 ParB-like nuclease domain AC612_19900 PF01370 NAD dependent epimerase/dehydratase family AC612_19905 PF00535 Glycosyl transferase family 2 AC612_19920 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AC612_19920 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AC612_19920 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AC612_19920 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AC612_19925 PF00692 dUTPase AC612_19930 PF04127 DNA / pantothenate metabolism flavoprotein AC612_19930 PF02441 Flavoprotein AC612_19935 PF04002 RadC-like JAB domain AC612_19940 PF00750 tRNA synthetases class I (R) AC612_19940 PF03485 Arginyl tRNA synthetase N terminal domain AC612_19940 PF05746 DALR anticodon binding domain AC612_19955 PF00106 short chain dehydrogenase AC612_19960 PF01757 Acyltransferase family AC612_19965 PF03033 Glycosyltransferase family 28 N-terminal domain AC612_19975 PF17944 Arginine decarboxylase C-terminal helical extension AC612_19975 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AC612_19975 PF17810 Arginine decarboxylase helical bundle domain AC612_19980 PF17284 Spermidine synthase tetramerisation domain AC612_20005 PF00963 Cohesin domain AC612_20005 PF07555 beta-N-acetylglucosaminidase AC612_20005 PF02838 Glycosyl hydrolase family 20, domain 2 AC612_20005 PF00041 Fibronectin type III domain AC612_20005 PF00754 F5/8 type C domain AC612_20010 PF00543 Nitrogen regulatory protein P-II AC612_20015 PF04380 Membrane fusogenic activity AC612_20020 PF01078 Magnesium chelatase, subunit ChlI AC612_20020 PF13335 Magnesium chelatase, subunit ChlI C-terminal AC612_20035 PF00563 EAL domain AC612_20035 PF12792 CSS motif domain associated with EAL AC612_20040 PF00487 Fatty acid desaturase AC612_20045 PF00175 Oxidoreductase NAD-binding domain AC612_20045 PF00111 2Fe-2S iron-sulfur cluster binding domain AC612_20045 PF00970 Oxidoreductase FAD-binding domain AC612_20050 PF00440 Bacterial regulatory proteins, tetR family AC612_20065 PF01609 Transposase DDE domain AC612_20065 PF05598 Transposase domain (DUF772) AC612_20075 PF01139 tRNA-splicing ligase RtcB AC612_20115 PF01370 NAD dependent epimerase/dehydratase family AC612_20115 PF08338 Domain of unknown function (DUF1731) AC612_20120 PF00486 Transcriptional regulatory protein, C terminal AC612_20120 PF00072 Response regulator receiver domain AC612_20125 PF00512 His Kinase A (phospho-acceptor) domain AC612_20125 PF08521 Two-component sensor kinase N-terminal AC612_20125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_20145 PF00595 PDZ domain AC612_20165 PF01594 AI-2E family transporter AC612_20170 PF13419 Haloacid dehalogenase-like hydrolase AC612_20175 PF02789 Cytosol aminopeptidase family, N-terminal domain AC612_20175 PF00883 Cytosol aminopeptidase family, catalytic domain AC612_20180 PF00872 Transposase, Mutator family AC612_20185 PF00872 Transposase, Mutator family AC612_20195 PF00199 Catalase AC612_20210 PF00072 Response regulator receiver domain AC612_20210 PF00196 Bacterial regulatory proteins, luxR family AC612_20215 PF07730 Histidine kinase AC612_20220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC612_20225 PF00005 ABC transporter AC612_20245 PF00892 EamA-like transporter family AC612_20250 PF00892 EamA-like transporter family AC612_20270 PF00753 Metallo-beta-lactamase superfamily AC612_20275 PF00579 tRNA synthetases class I (W and Y) AC612_20280 PF00872 Transposase, Mutator family AC612_20285 PF05532 CsbD-like AC612_20300 PF00491 Arginase family AC612_20325 PF02223 Thymidylate kinase AC612_20340 PF03309 Type III pantothenate kinase AC612_20345 PF02237 Biotin protein ligase C terminal domain AC612_20345 PF08279 HTH domain AC612_20345 PF03099 Biotin/lipoate A/B protein ligase family AC612_20355 PF06167 Glucose-regulated metallo-peptidase M90 AC612_20370 PF16527 Two-component sensor protein CpxA, periplasmic domain AC612_20370 PF00672 HAMP domain AC612_20370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_20370 PF00512 His Kinase A (phospho-acceptor) domain AC612_20375 PF00072 Response regulator receiver domain AC612_20375 PF00486 Transcriptional regulatory protein, C terminal AC612_20385 PF05598 Transposase domain (DUF772) AC612_20385 PF01609 Transposase DDE domain AC612_20390 PF01207 Dihydrouridine synthase (Dus) AC612_20405 PF06628 Catalase-related immune-responsive AC612_20405 PF00199 Catalase AC612_20410 PF06733 DEAD_2 AC612_20410 PF13307 Helicase C-terminal domain AC612_20425 PF08501 Shikimate dehydrogenase substrate binding domain AC612_20425 PF01488 Shikimate / quinate 5-dehydrogenase AC612_20425 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AC612_20435 PF00175 Oxidoreductase NAD-binding domain AC612_20435 PF00667 FAD binding domain AC612_20435 PF00258 Flavodoxin AC612_20445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC612_20445 PF03466 LysR substrate binding domain AC612_20455 PF00490 Delta-aminolevulinic acid dehydratase AC612_20480 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AC612_20480 PF00326 Prolyl oligopeptidase family AC612_20485 PF00043 Glutathione S-transferase, C-terminal domain AC612_20485 PF02798 Glutathione S-transferase, N-terminal domain AC612_20510 PF04820 Tryptophan halogenase AC612_20525 PF00005 ABC transporter AC612_20535 PF01381 Helix-turn-helix AC612_20545 PF01229 Glycosyl hydrolases family 39 AC612_20550 PF02583 Metal-sensitive transcriptional repressor AC612_20555 PF01545 Cation efflux family AC612_20565 PF07715 TonB-dependent Receptor Plug Domain AC612_20565 PF00593 TonB dependent receptor AC612_20575 PF01965 DJ-1/PfpI family AC612_20575 PF12833 Helix-turn-helix domain AC612_20580 PF00175 Oxidoreductase NAD-binding domain AC612_20580 PF01383 CpcD/allophycocyanin linker domain AC612_20585 PF00005 ABC transporter AC612_20590 PF01061 ABC-2 type transporter AC612_20595 PF08546 Ketopantoate reductase PanE/ApbA C terminal AC612_20595 PF02558 Ketopantoate reductase PanE/ApbA AC612_20625 PF00268 Ribonucleotide reductase, small chain AC612_20630 PF00317 Ribonucleotide reductase, all-alpha domain AC612_20630 PF03477 ATP cone domain AC612_20630 PF02867 Ribonucleotide reductase, barrel domain AC612_20640 PF13380 CoA binding domain AC612_20640 PF00583 Acetyltransferase (GNAT) family AC612_20640 PF13607 Succinyl-CoA ligase like flavodoxin domain AC612_20645 PF03448 MgtE intracellular N domain AC612_20645 PF01769 Divalent cation transporter AC612_20645 PF00571 CBS domain AC612_20650 PF00194 Eukaryotic-type carbonic anhydrase AC612_20660 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AC612_20660 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AC612_20665 PF00723 Glycosyl hydrolases family 15 AC612_20680 PF05166 YcgL domain AC612_20685 PF02801 Beta-ketoacyl synthase, C-terminal domain AC612_20685 PF00109 Beta-ketoacyl synthase, N-terminal domain AC612_20695 PF00535 Glycosyl transferase family 2 AC612_20740 PF07977 FabA-like domain AC612_20745 PF01553 Acyltransferase AC612_20755 PF00550 Phosphopantetheine attachment site AC612_20760 PF04820 Tryptophan halogenase AC612_20780 PF00326 Prolyl oligopeptidase family AC612_20780 PF07676 WD40-like Beta Propeller Repeat AC612_20785 PF05598 Transposase domain (DUF772) AC612_20785 PF01609 Transposase DDE domain AC612_20800 PF01218 Coproporphyrinogen III oxidase AC612_20805 PF00476 DNA polymerase family A AC612_20805 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AC612_20805 PF01612 3'-5' exonuclease AC612_20805 PF01367 5'-3' exonuclease, C-terminal SAM fold AC612_20835 PF00069 Protein kinase domain AC612_20875 PF04717 Type VI secretion system, phage-baseplate injector AC612_20890 PF00069 Protein kinase domain AC612_20890 PF03793 PASTA domain AC612_20900 PF08281 Sigma-70, region 4 AC612_20900 PF04542 Sigma-70 region 2 AC612_20915 PF00328 Histidine phosphatase superfamily (branch 2) AC612_20945 PF07724 AAA domain (Cdc48 subfamily) AC612_20945 PF17871 AAA lid domain AC612_20945 PF10431 C-terminal, D2-small domain, of ClpB protein AC612_20945 PF00004 ATPase family associated with various cellular activities (AAA) AC612_20970 PF05638 Type VI secretion system effector, Hcp AC612_20995 PF14602 Hexapeptide repeat of succinyl-transferase AC612_20995 PF12464 Maltose acetyltransferase AC612_21005 PF00580 UvrD/REP helicase N-terminal domain AC612_21005 PF13361 UvrD-like helicase C-terminal domain AC612_21015 PF13091 PLD-like domain AC612_21015 PF13396 Phospholipase_D-nuclease N-terminal AC612_21020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC612_21020 PF03466 LysR substrate binding domain AC612_21025 PF03737 Aldolase/RraA AC612_21030 PF04303 PrpF protein AC612_21040 PF00471 Ribosomal protein L33 AC612_21045 PF00830 Ribosomal L28 family AC612_21050 PF00873 AcrB/AcrD/AcrF family AC612_21055 PF13533 Biotin-lipoyl like AC612_21075 PF02527 rRNA small subunit methyltransferase G AC612_21080 PF16655 PhoD-like phosphatase, N-terminal domain AC612_21080 PF09423 PhoD-like phosphatase AC612_21085 PF09423 PhoD-like phosphatase AC612_21085 PF16655 PhoD-like phosphatase, N-terminal domain AC612_21090 PF01648 4'-phosphopantetheinyl transferase superfamily AC612_21100 PF04226 Transglycosylase associated protein AC612_21110 PF03372 Endonuclease/Exonuclease/phosphatase family AC612_21115 PF00480 ROK family AC612_21125 PF09312 SurA N-terminal domain AC612_21125 PF00639 PPIC-type PPIASE domain AC612_21135 PF00474 Sodium:solute symporter family AC612_21140 PF04341 Protein of unknown function, DUF485 AC612_21150 PF13193 AMP-binding enzyme C-terminal domain AC612_21150 PF00501 AMP-binding enzyme AC612_21150 PF16177 Acetyl-coenzyme A synthetase N-terminus AC612_21155 PF00072 Response regulator receiver domain AC612_21155 PF00196 Bacterial regulatory proteins, luxR family AC612_21190 PF00248 Aldo/keto reductase family AC612_21205 PF01557 Fumarylacetoacetate (FAA) hydrolase family AC612_21210 PF13378 Enolase C-terminal domain-like AC612_21210 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AC612_21215 PF05336 L-rhamnose mutarotase AC612_21220 PF07690 Major Facilitator Superfamily AC612_21225 PF09339 IclR helix-turn-helix domain AC612_21225 PF01614 Bacterial transcriptional regulator AC612_21230 PF02659 Putative manganese efflux pump AC612_21235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_21235 PF00512 His Kinase A (phospho-acceptor) domain AC612_21245 PF06165 Glycosyltransferase family 36 AC612_21245 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain AC612_21260 PF01011 PQQ enzyme repeat AC612_21260 PF13360 PQQ-like domain AC612_21260 PF13570 PQQ-like domain AC612_21280 PF04357 TamB, inner membrane protein subunit of TAM complex AC612_21285 PF17243 POTRA domain TamA domain 1 AC612_21285 PF01103 Surface antigen AC612_21295 PF05598 Transposase domain (DUF772) AC612_21295 PF01609 Transposase DDE domain AC612_21300 PF01609 Transposase DDE domain AC612_21300 PF05598 Transposase domain (DUF772) AC612_21305 PF01609 Transposase DDE domain AC612_21305 PF05598 Transposase domain (DUF772) AC612_21330 PF02092 Glycyl-tRNA synthetase beta subunit AC612_21330 PF05746 DALR anticodon binding domain AC612_21335 PF02091 Glycyl-tRNA synthetase alpha subunit AC612_21340 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AC612_21340 PF00437 Type II/IV secretion system protein AC612_21350 PF00117 Glutamine amidotransferase class-I AC612_21350 PF00958 GMP synthase C terminal domain AC612_21360 PF00902 Sec-independent protein translocase protein (TatC) AC612_21365 PF02416 mttA/Hcf106 family AC612_21370 PF02416 mttA/Hcf106 family AC612_21380 PF00762 Ferrochelatase AC612_21385 PF12697 Alpha/beta hydrolase family AC612_21400 PF04381 Putative exonuclease, RdgC AC612_21405 PF01171 PP-loop family AC612_21415 PF00356 Bacterial regulatory proteins, lacI family AC612_21420 PF07488 Glycosyl hydrolase family 67 middle domain AC612_21420 PF07477 Glycosyl hydrolase family 67 C-terminus AC612_21420 PF03648 Glycosyl hydrolase family 67 N-terminus AC612_21430 PF13378 Enolase C-terminal domain-like AC612_21430 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AC612_21435 PF04616 Glycosyl hydrolases family 43 AC612_21435 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AC612_21440 PF14310 Fibronectin type III-like domain AC612_21440 PF01915 Glycosyl hydrolase family 3 C-terminal domain AC612_21440 PF00933 Glycosyl hydrolase family 3 N terminal domain AC612_21440 PF07691 PA14 domain AC612_21445 PF01232 Mannitol dehydrogenase Rossmann domain AC612_21445 PF08125 Mannitol dehydrogenase C-terminal domain AC612_21475 PF00171 Aldehyde dehydrogenase family AC612_21500 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AC612_21500 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AC612_21515 PF01609 Transposase DDE domain AC612_21515 PF05598 Transposase domain (DUF772) AC612_21520 PF08450 SMP-30/Gluconolactonase/LRE-like region AC612_21525 PF00331 Glycosyl hydrolase family 10 AC612_21530 PF00703 Glycosyl hydrolases family 2 AC612_21530 PF02837 Glycosyl hydrolases family 2, sugar binding domain AC612_21530 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 AC612_21530 PF16355 Domain of unknown function (DUF4982) AC612_21530 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AC612_21535 PF02614 Glucuronate isomerase AC612_21555 PF00553 Cellulose binding domain AC612_21555 PF03422 Carbohydrate binding module (family 6) AC612_21555 PF00331 Glycosyl hydrolase family 10 AC612_21575 PF04616 Glycosyl hydrolases family 43 AC612_21605 PF00109 Beta-ketoacyl synthase, N-terminal domain AC612_21605 PF00698 Acyl transferase domain AC612_21605 PF08240 Alcohol dehydrogenase GroES-like domain AC612_21605 PF00107 Zinc-binding dehydrogenase AC612_21605 PF16197 Ketoacyl-synthetase C-terminal extension AC612_21605 PF00550 Phosphopantetheine attachment site AC612_21605 PF02801 Beta-ketoacyl synthase, C-terminal domain AC612_21605 PF14765 Polyketide synthase dehydratase AC612_21605 PF08659 KR domain AC612_21610 PF01553 Acyltransferase AC612_21620 PF00356 Bacterial regulatory proteins, lacI family AC612_21640 PF04820 Tryptophan halogenase AC612_21645 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AC612_21650 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) AC612_21655 PF04337 Protein of unknown function, DUF480 AC612_21665 PF13302 Acetyltransferase (GNAT) domain AC612_21670 PF00580 UvrD/REP helicase N-terminal domain AC612_21670 PF13361 UvrD-like helicase C-terminal domain AC612_21675 PF00265 Thymidine kinase AC612_21680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC612_21680 PF08446 PAS fold AC612_21680 PF00360 Phytochrome region AC612_21680 PF01590 GAF domain AC612_21680 PF00512 His Kinase A (phospho-acceptor) domain AC612_21685 PF04349 Periplasmic glucan biosynthesis protein, MdoG AC612_21695 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AC612_21695 PF06827 Zinc finger found in FPG and IleRS AC612_21695 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AC612_21725 PF03594 Benzoate membrane transport protein AC612_21730 PF01590 GAF domain AC612_21730 PF00360 Phytochrome region AC612_21730 PF08446 PAS fold AC612_21730 PF13426 PAS domain AC612_21735 PF01126 Heme oxygenase AC612_21740 PF07690 Major Facilitator Superfamily AC612_21745 PF01263 Aldose 1-epimerase AC612_21755 PF02810 SEC-C motif AC612_21760 PF01925 Sulfite exporter TauE/SafE AC612_21770 PF00872 Transposase, Mutator family AC612_21790 PF01227 GTP cyclohydrolase I AC612_21800 PF07869 Protein of unknown function (DUF1656) AC612_21805 PF00529 HlyD membrane-fusion protein of T1SS AC612_21805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC612_21810 PF02321 Outer membrane efflux protein AC612_21815 PF04632 Fusaric acid resistance protein family AC612_21820 PF00083 Sugar (and other) transporter AC612_21830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC612_21830 PF03466 LysR substrate binding domain AC612_21835 PF00106 short chain dehydrogenase AC612_21845 PF13091 PLD-like domain AC612_21845 PF13396 Phospholipase_D-nuclease N-terminal AC612_21865 PF00872 Transposase, Mutator family AC612_21890 PF00849 RNA pseudouridylate synthase AC612_21915 PF05598 Transposase domain (DUF772) AC612_21915 PF01609 Transposase DDE domain AC612_21930 PF00872 Transposase, Mutator family AC612_21950 PF13538 UvrD-like helicase C-terminal domain AC612_21955 PF12705 PD-(D/E)XK nuclease superfamily AC612_21955 PF00580 UvrD/REP helicase N-terminal domain AC612_21955 PF13361 UvrD-like helicase C-terminal domain AC612_21960 PF17946 RecC C-terminal domain AC612_21995 PF00005 ABC transporter AC612_22000 PF02405 Permease MlaE AC612_22005 PF02470 MlaD protein AC612_22010 PF05494 MlaC protein AC612_22020 PF04333 MlaA lipoprotein AC612_22030 PF00255 Glutathione peroxidase AC612_22040 PF02646 RmuC family AC612_22055 PF13417 Glutathione S-transferase, N-terminal domain AC612_22055 PF00043 Glutathione S-transferase, C-terminal domain AC612_22100 PF02796 Helix-turn-helix domain of resolvase AC612_22100 PF00239 Resolvase, N terminal domain AC612_22105 PF04221 RelB antitoxin AC612_22110 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ AC612_22160 PF18340 DNA relaxase TraI 2B/2B-like domain AC612_22160 PF18272 single-stranded DNA binding TraI N-terminal subdomain AC612_22160 PF07057 DNA helicase TraI AC612_22160 PF08751 TrwC relaxase AC612_22165 PF00672 HAMP domain AC612_22165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC612_22165 PF02203 Tar ligand binding domain homologue AC612_22190 PF02796 Helix-turn-helix domain of resolvase AC612_22190 PF00239 Resolvase, N terminal domain AC612_22225 PF13614 AAA domain AC612_22250 PF07971 Glycosyl hydrolase family 92 AC612_22250 PF17678 Glycosyl hydrolase family 92 N-terminal domain AC612_22255 PF10947 Protein of unknown function (DUF2628) AC612_22270 PF02595 Glycerate kinase family AC612_22275 PF07690 Major Facilitator Superfamily AC612_22290 PF10672 S-adenosylmethionine-dependent methyltransferase AC612_22290 PF17785 PUA-like domain AC612_22295 PF03741 Integral membrane protein TerC family AC612_22300 PF01694 Rhomboid family AC612_22305 PF03009 Glycerophosphoryl diester phosphodiesterase family AC612_22315 PF01569 PAP2 superfamily AC612_22320 PF12631 MnmE helical domain AC612_22320 PF10396 GTP-binding protein TrmE N-terminus AC612_22320 PF01926 50S ribosome-binding GTPase AC612_22330 PF02096 60Kd inner membrane protein AC612_22330 PF14849 YidC periplasmic domain AC612_22335 PF00825 Ribonuclease P AC612_22340 PF00468 Ribosomal protein L34 AC612_22355 PF06067 Domain of unknown function (DUF932) AC612_22375 PF18495 Antitoxin VbhA AC612_22395 PF00872 Transposase, Mutator family AC612_22400 PF00872 Transposase, Mutator family AC612_22440 PF00872 Transposase, Mutator family AC612_22445 PF02796 Helix-turn-helix domain of resolvase AC612_22445 PF00239 Resolvase, N terminal domain AC612_22450 PF01555 DNA methylase AC612_22455 PF09571 XcyI restriction endonuclease AC612_22485 PF01527 Transposase AC612_22495 PF13406 Transglycosylase SLT domain AC612_22510 PF00872 Transposase, Mutator family AC612_22530 PF11740 Plasmid replication region DNA-binding N-term AC612_22545 PF01527 Transposase AC612_22565 PF03377 TAL effector repeat