locus-tag class description DGN16_00010 PF00308 Bacterial dnaA protein DGN16_00010 PF08299 Bacterial dnaA protein helix-turn-helix DGN16_00010 PF11638 DnaA N-terminal domain DGN16_00015 PF00712 DNA polymerase III beta subunit, N-terminal domain DGN16_00015 PF02767 DNA polymerase III beta subunit, central domain DGN16_00015 PF02768 DNA polymerase III beta subunit, C-terminal domain DGN16_00020 PF02463 RecF/RecN/SMC N terminal domain DGN16_00025 PF00204 DNA gyrase B DGN16_00025 PF00986 DNA gyrase B subunit, carboxyl terminus DGN16_00025 PF18053 DNA gyrase B subunit insert domain DGN16_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_00025 PF01751 Toprim domain DGN16_00035 PF01435 Peptidase family M48 DGN16_00045 PF03544 Gram-negative bacterial TonB protein C-terminal DGN16_00050 PF01618 MotA/TolQ/ExbB proton channel family DGN16_00055 PF02472 Biopolymer transport protein ExbD/TolR DGN16_00060 PF02472 Biopolymer transport protein ExbD/TolR DGN16_00070 PF02472 Biopolymer transport protein ExbD/TolR DGN16_00075 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DGN16_00085 PF13091 PLD-like domain DGN16_00085 PF13396 Phospholipase_D-nuclease N-terminal DGN16_00105 PF04055 Radical SAM superfamily DGN16_00115 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) DGN16_00130 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DGN16_00130 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DGN16_00135 PF13180 PDZ domain DGN16_00135 PF03572 Peptidase family S41 DGN16_00140 PF01551 Peptidase family M23 DGN16_00150 PF04389 Peptidase family M28 DGN16_00160 PF00150 Cellulase (glycosyl hydrolase family 5) DGN16_00165 PF00150 Cellulase (glycosyl hydrolase family 5) DGN16_00175 PF00150 Cellulase (glycosyl hydrolase family 5) DGN16_00185 PF08240 Alcohol dehydrogenase GroES-like domain DGN16_00185 PF00107 Zinc-binding dehydrogenase DGN16_00190 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGN16_00190 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DGN16_00195 PF00310 Glutamine amidotransferases class-II DGN16_00195 PF04898 Glutamate synthase central domain DGN16_00195 PF01645 Conserved region in glutamate synthase DGN16_00195 PF01493 GXGXG motif DGN16_00280 PF00270 DEAD/DEAH box helicase DGN16_00280 PF09369 Domain of unknown function (DUF1998) DGN16_00280 PF00271 Helicase conserved C-terminal domain DGN16_00285 PF03006 Haemolysin-III related DGN16_00305 PF00106 short chain dehydrogenase DGN16_00315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN16_00315 PF03466 LysR substrate binding domain DGN16_00335 PF02525 Flavodoxin-like fold DGN16_00355 PF01609 Transposase DDE domain DGN16_00355 PF05598 Transposase domain (DUF772) DGN16_00385 PF03781 Sulfatase-modifying factor enzyme 1 DGN16_00385 PF12867 DinB superfamily DGN16_00395 PF00528 Binding-protein-dependent transport system inner membrane component DGN16_00400 PF00005 ABC transporter DGN16_00400 PF00571 CBS domain DGN16_00415 PF00005 ABC transporter DGN16_00425 PF01734 Patatin-like phospholipase DGN16_00430 PF00593 TonB dependent receptor DGN16_00430 PF07660 Secretin and TonB N terminus short domain DGN16_00430 PF07715 TonB-dependent Receptor Plug Domain DGN16_00435 PF01037 Lrp/AsnC ligand binding domain DGN16_00440 PF00351 Biopterin-dependent aromatic amino acid hydroxylase DGN16_00450 PF00657 GDSL-like Lipase/Acylhydrolase DGN16_00465 PF04962 KduI/IolB family DGN16_00480 PF00356 Bacterial regulatory proteins, lacI family DGN16_00485 PF04616 Glycosyl hydrolases family 43 DGN16_00485 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain DGN16_00490 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DGN16_00500 PF03480 Bacterial extracellular solute-binding protein, family 7 DGN16_00510 PF07859 alpha/beta hydrolase fold DGN16_00510 PF13472 GDSL-like Lipase/Acylhydrolase family DGN16_00515 PF00135 Carboxylesterase family DGN16_00520 PF00248 Aldo/keto reductase family DGN16_00530 PF00128 Alpha amylase, catalytic domain DGN16_00530 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DGN16_00530 PF02806 Alpha amylase, C-terminal all-beta domain DGN16_00535 PF00128 Alpha amylase, catalytic domain DGN16_00535 PF16657 Maltogenic Amylase, C-terminal domain DGN16_00540 PF11896 Domain of unknown function (DUF3416) DGN16_00540 PF00128 Alpha amylase, catalytic domain DGN16_00565 PF01609 Transposase DDE domain DGN16_00565 PF05598 Transposase domain (DUF772) DGN16_00590 PF00872 Transposase, Mutator family DGN16_00595 PF00872 Transposase, Mutator family DGN16_00610 PF00294 pfkB family carbohydrate kinase DGN16_00620 PF07055 Enoyl reductase FAD binding domain DGN16_00620 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase DGN16_00620 PF12241 Trans-2-enoyl-CoA reductase catalytic region DGN16_00625 PF18500 CadC C-terminal domain 1 DGN16_00625 PF00486 Transcriptional regulatory protein, C terminal DGN16_00645 PF00072 Response regulator receiver domain DGN16_00645 PF00196 Bacterial regulatory proteins, luxR family DGN16_00650 PF07730 Histidine kinase DGN16_00655 PF00144 Beta-lactamase DGN16_00665 PF01070 FMN-dependent dehydrogenase DGN16_00670 PF02735 Ku70/Ku80 beta-barrel domain DGN16_00690 PF00171 Aldehyde dehydrogenase family DGN16_00705 PF07715 TonB-dependent Receptor Plug Domain DGN16_00705 PF00593 TonB dependent receptor DGN16_00710 PF00155 Aminotransferase class I and II DGN16_00715 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain DGN16_00750 PF17863 AAA lid domain DGN16_00750 PF07726 ATPase family associated with various cellular activities (AAA) DGN16_00795 PF08946 Osmosensory transporter coiled coil DGN16_00795 PF00083 Sugar (and other) transporter DGN16_00805 PF00085 Thioredoxin DGN16_00825 PF00293 NUDIX domain DGN16_00825 PF13344 Haloacid dehalogenase-like hydrolase DGN16_00830 PF05598 Transposase domain (DUF772) DGN16_00830 PF01609 Transposase DDE domain DGN16_00860 PF05532 CsbD-like DGN16_00870 PF01609 Transposase DDE domain DGN16_00870 PF05598 Transposase domain (DUF772) DGN16_00880 PF01883 Iron-sulfur cluster assembly protein DGN16_00880 PF10609 NUBPL iron-transfer P-loop NTPase DGN16_00895 PF13091 PLD-like domain DGN16_00900 PF03061 Thioesterase superfamily DGN16_00930 PF00107 Zinc-binding dehydrogenase DGN16_00930 PF08240 Alcohol dehydrogenase GroES-like domain DGN16_00940 PF02673 Bacitracin resistance protein BacA DGN16_00950 PF03951 Glutamine synthetase, beta-Grasp domain DGN16_00950 PF00120 Glutamine synthetase, catalytic domain DGN16_00955 PF00543 Nitrogen regulatory protein P-II DGN16_00960 PF00909 Ammonium Transporter Family DGN16_00965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_00965 PF00512 His Kinase A (phospho-acceptor) domain DGN16_00965 PF00989 PAS fold DGN16_00970 PF02954 Bacterial regulatory protein, Fis family DGN16_00970 PF00158 Sigma-54 interaction domain DGN16_00970 PF00072 Response regulator receiver domain DGN16_00975 PF00080 Copper/zinc superoxide dismutase (SODC) DGN16_00980 PF00080 Copper/zinc superoxide dismutase (SODC) DGN16_00990 PF05598 Transposase domain (DUF772) DGN16_00990 PF01609 Transposase DDE domain DGN16_01005 PF02803 Thiolase, C-terminal domain DGN16_01005 PF00108 Thiolase, N-terminal domain DGN16_01040 PF00581 Rhodanese-like domain DGN16_01045 PF02556 Preprotein translocase subunit SecB DGN16_01050 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DGN16_01050 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DGN16_01065 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DGN16_01065 PF00205 Thiamine pyrophosphate enzyme, central domain DGN16_01065 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DGN16_01070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_01075 PF02954 Bacterial regulatory protein, Fis family DGN16_01075 PF00072 Response regulator receiver domain DGN16_01075 PF00158 Sigma-54 interaction domain DGN16_01090 PF07690 Major Facilitator Superfamily DGN16_01095 PF00588 SpoU rRNA Methylase family DGN16_01110 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DGN16_01110 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DGN16_01120 PF00561 alpha/beta hydrolase fold DGN16_01125 PF03692 Putative zinc- or iron-chelating domain DGN16_01130 PF00501 AMP-binding enzyme DGN16_01135 PF00072 Response regulator receiver domain DGN16_01135 PF00486 Transcriptional regulatory protein, C terminal DGN16_01140 PF00144 Beta-lactamase DGN16_01145 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family DGN16_01175 PF03109 ABC1 family DGN16_01185 PF00849 RNA pseudouridylate synthase DGN16_01195 PF00472 RF-1 domain DGN16_01205 PF01112 Asparaginase DGN16_01210 PF01432 Peptidase family M3 DGN16_01215 PF12706 Beta-lactamase superfamily domain DGN16_01240 PF12833 Helix-turn-helix domain DGN16_01245 PF00999 Sodium/hydrogen exchanger family DGN16_01250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN16_01250 PF03466 LysR substrate binding domain DGN16_01255 PF01274 Malate synthase DGN16_01260 PF00463 Isocitrate lyase family DGN16_01265 PF00990 Diguanylate cyclase, GGDEF domain DGN16_01275 PF05598 Transposase domain (DUF772) DGN16_01275 PF01609 Transposase DDE domain DGN16_01300 PF00326 Prolyl oligopeptidase family DGN16_01305 PF02785 Biotin carboxylase C-terminal domain DGN16_01305 PF00289 Biotin carboxylase, N-terminal domain DGN16_01305 PF00364 Biotin-requiring enzyme DGN16_01305 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DGN16_01305 PF18140 Propionyl-coenzyme A carboxylase BT domain DGN16_01310 PF01039 Carboxyl transferase domain DGN16_01315 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DGN16_01315 PF02770 Acyl-CoA dehydrogenase, middle domain DGN16_01315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DGN16_01370 PF07683 Cobalamin synthesis protein cobW C-terminal domain DGN16_01370 PF02492 CobW/HypB/UreG, nucleotide-binding domain DGN16_01390 PF03969 AFG1-like ATPase DGN16_01395 PF01047 MarR family DGN16_01400 PF02566 OsmC-like protein DGN16_01430 PF00107 Zinc-binding dehydrogenase DGN16_01430 PF16884 N-terminal domain of oxidoreductase DGN16_01435 PF00248 Aldo/keto reductase family DGN16_01445 PF00849 RNA pseudouridylate synthase DGN16_01450 PF00593 TonB dependent receptor DGN16_01460 PF00270 DEAD/DEAH box helicase DGN16_01460 PF08482 ATP-dependent helicase C-terminal DGN16_01460 PF00271 Helicase conserved C-terminal domain DGN16_01460 PF04408 Helicase associated domain (HA2) DGN16_01470 PF07308 Protein of unknown function (DUF1456) DGN16_01475 PF00576 HIUase/Transthyretin family DGN16_01480 PF13454 FAD-NAD(P)-binding DGN16_01485 PF01014 Uricase DGN16_01485 PF09349 OHCU decarboxylase DGN16_01500 PF00266 Aminotransferase class-V DGN16_01505 PF07687 Peptidase dimerisation domain DGN16_01505 PF01546 Peptidase family M20/M25/M40 DGN16_01510 PF03466 LysR substrate binding domain DGN16_01510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN16_01515 PF00561 alpha/beta hydrolase fold DGN16_01530 PF01425 Amidase DGN16_01535 PF01156 Inosine-uridine preferring nucleoside hydrolase DGN16_01545 PF00860 Permease family DGN16_01555 PF00111 2Fe-2S iron-sulfur cluster binding domain DGN16_01560 PF00355 Rieske [2Fe-2S] domain DGN16_01565 PF03466 LysR substrate binding domain DGN16_01565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN16_01590 PF03466 LysR substrate binding domain DGN16_01590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN16_01595 PF07690 Major Facilitator Superfamily DGN16_01605 PF08386 TAP-like protein DGN16_01605 PF00561 alpha/beta hydrolase fold DGN16_01610 PF02146 Sir2 family DGN16_01615 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DGN16_01620 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DGN16_01620 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DGN16_01630 PF00551 Formyl transferase DGN16_01635 PF00072 Response regulator receiver domain DGN16_01635 PF00486 Transcriptional regulatory protein, C terminal DGN16_01640 PF00672 HAMP domain DGN16_01640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_01640 PF00512 His Kinase A (phospho-acceptor) domain DGN16_01645 PF00529 HlyD membrane-fusion protein of T1SS DGN16_01645 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGN16_01650 PF00873 AcrB/AcrD/AcrF family DGN16_01655 PF08139 Prokaryotic membrane lipoprotein lipid attachment site DGN16_01655 PF02321 Outer membrane efflux protein DGN16_01665 PF02219 Methylenetetrahydrofolate reductase DGN16_01670 PF02677 Epoxyqueuosine reductase QueH DGN16_01675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN16_01675 PF03466 LysR substrate binding domain DGN16_01680 PF03358 NADPH-dependent FMN reductase DGN16_01690 PF01717 Cobalamin-independent synthase, Catalytic domain DGN16_01690 PF08267 Cobalamin-independent synthase, N-terminal domain DGN16_01695 PF03812 2-keto-3-deoxygluconate permease DGN16_01710 PF05368 NmrA-like family DGN16_01715 PF01638 HxlR-like helix-turn-helix DGN16_01755 PF00872 Transposase, Mutator family DGN16_01765 PF01609 Transposase DDE domain DGN16_01765 PF05598 Transposase domain (DUF772) DGN16_01775 PF00920 Dehydratase family DGN16_01790 PF00132 Bacterial transferase hexapeptide (six repeats) DGN16_01800 PF07690 Major Facilitator Superfamily DGN16_01805 PF11871 Domain of unknown function (DUF3391) DGN16_01805 PF01966 HD domain DGN16_01835 PF01494 FAD binding domain DGN16_01845 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DGN16_01845 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DGN16_01850 PF00230 Major intrinsic protein DGN16_01855 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DGN16_01855 PF01266 FAD dependent oxidoreductase DGN16_01860 PF08220 DeoR-like helix-turn-helix domain DGN16_01860 PF00455 DeoR C terminal sensor domain DGN16_01865 PF00111 2Fe-2S iron-sulfur cluster binding domain DGN16_01865 PF00970 Oxidoreductase FAD-binding domain DGN16_01870 PF00355 Rieske [2Fe-2S] domain DGN16_01875 PF01144 Coenzyme A transferase DGN16_01880 PF01144 Coenzyme A transferase DGN16_01885 PF02803 Thiolase, C-terminal domain DGN16_01885 PF00108 Thiolase, N-terminal domain DGN16_01890 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal DGN16_01890 PF00775 Dioxygenase DGN16_01900 PF10397 Adenylosuccinate lyase C-terminus DGN16_01900 PF00206 Lyase DGN16_01905 PF12146 Serine aminopeptidase, S33 DGN16_01910 PF02627 Carboxymuconolactone decarboxylase family DGN16_01925 PF09339 IclR helix-turn-helix domain DGN16_01925 PF01614 Bacterial transcriptional regulator DGN16_01935 PF07859 alpha/beta hydrolase fold DGN16_01940 PF10677 Protein of unknown function (DUF2490) DGN16_01945 PF01134 Glucose inhibited division protein A DGN16_01945 PF13932 GidA associated domain DGN16_01955 PF00291 Pyridoxal-phosphate dependent enzyme DGN16_01980 PF13649 Methyltransferase domain DGN16_01990 PF12697 Alpha/beta hydrolase family DGN16_02000 PF00155 Aminotransferase class I and II DGN16_02005 PF04055 Radical SAM superfamily DGN16_02005 PF06968 Biotin and Thiamin Synthesis associated domain DGN16_02020 PF01040 UbiA prenyltransferase family DGN16_02050 PF05819 NolX protein DGN16_02055 PF01609 Transposase DDE domain DGN16_02055 PF05598 Transposase domain (DUF772) DGN16_02100 PF01313 Bacterial export proteins, family 3 DGN16_02105 PF00813 FliP family DGN16_02120 PF00771 FHIPEP family DGN16_02125 PF01312 FlhB HrpN YscU SpaS Family DGN16_02140 PF01514 Secretory protein of YscJ/FliF family DGN16_02155 PF02874 ATP synthase alpha/beta family, beta-barrel domain DGN16_02155 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DGN16_02155 PF18269 T3SS EscN ATPase C-terminal domain DGN16_02165 PF01311 Bacterial export proteins, family 1 DGN16_02170 PF00263 Bacterial type II and III secretion system protein DGN16_02170 PF03958 Bacterial type II/III secretion system short domain DGN16_02180 PF01464 Transglycosylase SLT domain DGN16_02215 PF12794 Mechanosensitive ion channel inner membrane domain 1 DGN16_02215 PF12795 Mechanosensitive ion channel porin domain DGN16_02215 PF00924 Mechanosensitive ion channel DGN16_02220 PF00884 Sulfatase DGN16_02225 PF03109 ABC1 family DGN16_02235 PF05661 Protein of unknown function (DUF808) DGN16_02240 PF00990 Diguanylate cyclase, GGDEF domain DGN16_02245 PF08323 Starch synthase catalytic domain DGN16_02245 PF00534 Glycosyl transferases group 1 DGN16_02250 PF00128 Alpha amylase, catalytic domain DGN16_02250 PF02806 Alpha amylase, C-terminal all-beta domain DGN16_02250 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DGN16_02255 PF00128 Alpha amylase, catalytic domain DGN16_02255 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DGN16_02255 PF11941 Domain of unknown function (DUF3459) DGN16_02260 PF02446 4-alpha-glucanotransferase DGN16_02265 PF00128 Alpha amylase, catalytic domain DGN16_02275 PF00128 Alpha amylase, catalytic domain DGN16_02275 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DGN16_02280 PF13460 NAD(P)H-binding DGN16_02300 PF06903 VirK protein DGN16_02305 PF02321 Outer membrane efflux protein DGN16_02320 PF00873 AcrB/AcrD/AcrF family DGN16_02335 PF00271 Helicase conserved C-terminal domain DGN16_02335 PF00270 DEAD/DEAH box helicase DGN16_02340 PF02817 e3 binding domain DGN16_02340 PF00364 Biotin-requiring enzyme DGN16_02340 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DGN16_02350 PF02779 Transketolase, pyrimidine binding domain DGN16_02350 PF02780 Transketolase, C-terminal domain DGN16_02355 PF00676 Dehydrogenase E1 component DGN16_02365 PF03301 Tryptophan 2,3-dioxygenase DGN16_02370 PF00854 POT family DGN16_02380 PF01047 MarR family DGN16_02385 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DGN16_02410 PF03334 Na+/H+ antiporter subunit DGN16_02415 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) DGN16_02425 PF00361 Proton-conducting membrane transporter DGN16_02430 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DGN16_02435 PF13244 Domain of unknown function (DUF4040) DGN16_02435 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter DGN16_02435 PF00361 Proton-conducting membrane transporter DGN16_02435 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DGN16_02450 PF01447 Thermolysin metallopeptidase, catalytic domain DGN16_02450 PF01483 Proprotein convertase P-domain DGN16_02450 PF07504 Fungalysin/Thermolysin Propeptide Motif DGN16_02450 PF02868 Thermolysin metallopeptidase, alpha-helical domain DGN16_02460 PF01259 SAICAR synthetase DGN16_02465 PF00226 DnaJ domain DGN16_02465 PF05099 Tellurite resistance protein TerB DGN16_02475 PF00834 Ribulose-phosphate 3 epimerase family DGN16_02480 PF00583 Acetyltransferase (GNAT) family DGN16_02485 PF00781 Diacylglycerol kinase catalytic domain DGN16_02490 PF04715 Anthranilate synthase component I, N terminal region DGN16_02490 PF00425 chorismate binding enzyme DGN16_02510 PF05598 Transposase domain (DUF772) DGN16_02510 PF01609 Transposase DDE domain DGN16_02525 PF01609 Transposase DDE domain DGN16_02525 PF05598 Transposase domain (DUF772) DGN16_02535 PF00117 Glutamine amidotransferase class-I DGN16_02545 PF00591 Glycosyl transferase family, a/b domain DGN16_02545 PF02885 Glycosyl transferase family, helical bundle domain DGN16_02550 PF00218 Indole-3-glycerol phosphate synthase DGN16_02560 PF00325 Bacterial regulatory proteins, crp family DGN16_02560 PF00027 Cyclic nucleotide-binding domain DGN16_02565 PF02675 S-adenosylmethionine decarboxylase DGN16_02570 PF00893 Small Multidrug Resistance protein DGN16_02575 PF03232 Ubiquinone biosynthesis protein COQ7 DGN16_02580 PF00572 Ribosomal protein L13 DGN16_02585 PF00380 Ribosomal protein S9/S16 DGN16_02600 PF00293 NUDIX domain DGN16_02610 PF00210 Ferritin-like domain DGN16_02615 PF00672 HAMP domain DGN16_02615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_02615 PF00512 His Kinase A (phospho-acceptor) domain DGN16_02615 PF01627 Hpt domain DGN16_02615 PF00072 Response regulator receiver domain DGN16_02615 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DGN16_02620 PF00072 Response regulator receiver domain DGN16_02620 PF00486 Transcriptional regulatory protein, C terminal DGN16_02640 PF01521 Iron-sulphur cluster biosynthesis DGN16_02650 PF00293 NUDIX domain DGN16_02650 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain DGN16_02650 PF09297 NADH pyrophosphatase zinc ribbon domain DGN16_02655 PF17113 Regulatory signalling modulator protein AmpE DGN16_02655 PF03186 CobD/Cbib protein DGN16_02670 PF07690 Major Facilitator Superfamily DGN16_02675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN16_02675 PF03466 LysR substrate binding domain DGN16_02680 PF07690 Major Facilitator Superfamily DGN16_02685 PF12805 FUSC-like inner membrane protein yccS DGN16_02695 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DGN16_02695 PF02844 Phosphoribosylglycinamide synthetase, N domain DGN16_02695 PF02843 Phosphoribosylglycinamide synthetase, C domain DGN16_02705 PF01808 AICARFT/IMPCHase bienzyme DGN16_02705 PF02142 MGS-like domain DGN16_02710 PF01066 CDP-alcohol phosphatidyltransferase DGN16_02720 PF00782 Dual specificity phosphatase, catalytic domain DGN16_02750 PF02954 Bacterial regulatory protein, Fis family DGN16_02765 PF01381 Helix-turn-helix DGN16_02795 PF00289 Biotin carboxylase, N-terminal domain DGN16_02795 PF02785 Biotin carboxylase C-terminal domain DGN16_02795 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DGN16_02805 PF00364 Biotin-requiring enzyme DGN16_02810 PF01220 Dehydroquinase class II DGN16_02815 PF11412 Disulphide bond corrector protein DsbC DGN16_02815 PF02683 Cytochrome C biogenesis protein transmembrane region DGN16_02820 PF03091 CutA1 divalent ion tolerance protein DGN16_02830 PF04231 Endonuclease I DGN16_02835 PF00166 Chaperonin 10 Kd subunit DGN16_02840 PF00118 TCP-1/cpn60 chaperonin family DGN16_02850 PF07715 TonB-dependent Receptor Plug Domain DGN16_02850 PF00593 TonB dependent receptor DGN16_02855 PF00793 DAHP synthetase I family DGN16_02870 PF08450 SMP-30/Gluconolactonase/LRE-like region DGN16_02880 PF03710 Glutamate-ammonia ligase adenylyltransferase DGN16_02880 PF08335 GlnD PII-uridylyltransferase DGN16_02885 PF02592 Putative vitamin uptake transporter DGN16_02910 PF00881 Nitroreductase family DGN16_02915 PF04264 YceI-like domain DGN16_02940 PF16957 Malonate decarboxylase, alpha subunit, transporter DGN16_02945 PF06857 Malonate decarboxylase delta subunit (MdcD) DGN16_02950 PF01039 Carboxyl transferase domain DGN16_02960 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG DGN16_02965 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase DGN16_02970 PF00698 Acyl transferase domain DGN16_02980 PF07729 FCD domain DGN16_02980 PF00392 Bacterial regulatory proteins, gntR family DGN16_03025 PF07745 Glycosyl hydrolase family 53 DGN16_03030 PF17831 Pyruvate dehydrogenase E1 component middle domain DGN16_03030 PF00456 Transketolase, thiamine diphosphate binding domain DGN16_03045 PF05598 Transposase domain (DUF772) DGN16_03045 PF01609 Transposase DDE domain DGN16_03070 PF05598 Transposase domain (DUF772) DGN16_03070 PF01609 Transposase DDE domain DGN16_03110 PF00106 short chain dehydrogenase DGN16_03125 PF00106 short chain dehydrogenase DGN16_03135 PF13409 Glutathione S-transferase, N-terminal domain DGN16_03170 PF00326 Prolyl oligopeptidase family DGN16_03170 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region DGN16_03180 PF07759 Protein of unknown function (DUF1615) DGN16_03190 PF00990 Diguanylate cyclase, GGDEF domain DGN16_03215 PF00892 EamA-like transporter family DGN16_03220 PF03330 Lytic transglycolase DGN16_03225 PF00553 Cellulose binding domain DGN16_03225 PF00041 Fibronectin type III domain DGN16_03225 PF01341 Glycosyl hydrolases family 6 DGN16_03235 PF00324 Amino acid permease DGN16_03245 PF01544 CorA-like Mg2+ transporter protein DGN16_03255 PF01204 Trehalase DGN16_03270 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DGN16_03270 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DGN16_03295 PF03707 Bacterial signalling protein N terminal repeat DGN16_03295 PF00990 Diguanylate cyclase, GGDEF domain DGN16_03295 PF00563 EAL domain DGN16_03305 PF00672 HAMP domain DGN16_03305 PF02203 Tar ligand binding domain homologue DGN16_03305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN16_03310 PF00553 Cellulose binding domain DGN16_03310 PF00150 Cellulase (glycosyl hydrolase family 5) DGN16_03315 PF00916 Sulfate permease family DGN16_03315 PF01740 STAS domain DGN16_03345 PF13632 Glycosyl transferase family group 2 DGN16_03355 PF07694 5TMR of 5TMR-LYT DGN16_03355 PF06580 Histidine kinase DGN16_03360 PF00072 Response regulator receiver domain DGN16_03360 PF04397 LytTr DNA-binding domain DGN16_03365 PF03900 Porphobilinogen deaminase, C-terminal domain DGN16_03365 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DGN16_03395 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DGN16_03395 PF00326 Prolyl oligopeptidase family DGN16_03400 PF00155 Aminotransferase class I and II DGN16_03405 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DGN16_03405 PF00326 Prolyl oligopeptidase family DGN16_03410 PF04304 Protein of unknown function (DUF454) DGN16_03420 PF01678 Diaminopimelate epimerase DGN16_03430 PF02899 Phage integrase, N-terminal SAM-like domain DGN16_03430 PF00589 Phage integrase family DGN16_03435 PF00227 Proteasome subunit DGN16_03440 PF00004 ATPase family associated with various cellular activities (AAA) DGN16_03440 PF07724 AAA domain (Cdc48 subfamily) DGN16_03440 PF10431 C-terminal, D2-small domain, of ClpB protein DGN16_03450 PF13673 Acetyltransferase (GNAT) domain DGN16_03455 PF13533 Biotin-lipoyl like DGN16_03465 PF01209 ubiE/COQ5 methyltransferase family DGN16_03470 PF03707 Bacterial signalling protein N terminal repeat DGN16_03470 PF00990 Diguanylate cyclase, GGDEF domain DGN16_03470 PF00563 EAL domain DGN16_03475 PF01433 Peptidase family M1 domain DGN16_03475 PF11838 ERAP1-like C-terminal domain DGN16_03515 PF00107 Zinc-binding dehydrogenase DGN16_03515 PF08240 Alcohol dehydrogenase GroES-like domain DGN16_03530 PF00294 pfkB family carbohydrate kinase DGN16_03540 PF04085 rod shape-determining protein MreC DGN16_03550 PF00905 Penicillin binding protein transpeptidase domain DGN16_03550 PF03717 Penicillin-binding Protein dimerisation domain DGN16_03555 PF01098 Cell cycle protein DGN16_03560 PF00295 Glycosyl hydrolases family 28 DGN16_03565 PF13406 Transglycosylase SLT domain DGN16_03570 PF05036 Sporulation related domain DGN16_03570 PF03330 Lytic transglycolase DGN16_03580 PF00768 D-alanyl-D-alanine carboxypeptidase DGN16_03580 PF07943 Penicillin-binding protein 5, C-terminal domain DGN16_03590 PF04359 Protein of unknown function (DUF493) DGN16_03595 PF03099 Biotin/lipoate A/B protein ligase family DGN16_03600 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DGN16_03600 PF04055 Radical SAM superfamily DGN16_03605 PF11818 C-terminal domain of tail specific protease (DUF3340) DGN16_03605 PF00595 PDZ domain DGN16_03605 PF03572 Peptidase family S41 DGN16_03605 PF17804 Tail specific protease N-terminal domain DGN16_03615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN16_03615 PF03466 LysR substrate binding domain DGN16_03625 PF00293 NUDIX domain DGN16_03625 PF01467 Cytidylyltransferase-like DGN16_03660 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DGN16_03660 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DGN16_03665 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DGN16_03665 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DGN16_03670 PF04972 BON domain DGN16_03675 PF00512 His Kinase A (phospho-acceptor) domain DGN16_03675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_03675 PF00360 Phytochrome region DGN16_03675 PF01590 GAF domain DGN16_03675 PF08446 PAS fold DGN16_03680 PF00072 Response regulator receiver domain DGN16_03685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_03685 PF00512 His Kinase A (phospho-acceptor) domain DGN16_03690 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DGN16_03740 PF03958 Bacterial type II/III secretion system short domain DGN16_03740 PF00263 Bacterial type II and III secretion system protein DGN16_03745 PF00437 Type II/IV secretion system protein DGN16_03750 PF00482 Type II secretion system (T2SS), protein F DGN16_03755 PF07963 Prokaryotic N-terminal methylation motif DGN16_03755 PF08334 Type II secretion system (T2SS), protein G DGN16_03760 PF07963 Prokaryotic N-terminal methylation motif DGN16_03760 PF12019 Type II transport protein GspH DGN16_03765 PF02501 Type II secretion system (T2SS), protein I DGN16_03765 PF07963 Prokaryotic N-terminal methylation motif DGN16_03770 PF07963 Prokaryotic N-terminal methylation motif DGN16_03770 PF11612 Type II secretion system (T2SS), protein J DGN16_03775 PF03934 Type II secretion system (T2SS), protein K DGN16_03800 PF16355 Domain of unknown function (DUF4982) DGN16_03800 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 DGN16_03800 PF00703 Glycosyl hydrolases family 2 DGN16_03800 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DGN16_03800 PF02837 Glycosyl hydrolases family 2, sugar binding domain DGN16_03815 PF07702 UTRA domain DGN16_03815 PF00392 Bacterial regulatory proteins, gntR family DGN16_03820 PF07690 Major Facilitator Superfamily DGN16_03825 PF00356 Bacterial regulatory proteins, lacI family DGN16_03830 PF01380 SIS domain DGN16_03835 PF01979 Amidohydrolase family DGN16_03850 PF12627 Probable RNA and SrmB- binding site of polymerase A DGN16_03850 PF01743 Poly A polymerase head domain DGN16_03850 PF01966 HD domain DGN16_03855 PF05199 GMC oxidoreductase DGN16_03855 PF00732 GMC oxidoreductase DGN16_03860 PF00171 Aldehyde dehydrogenase family DGN16_03865 PF02028 BCCT, betaine/carnitine/choline family transporter DGN16_03880 PF01323 DSBA-like thioredoxin domain DGN16_03890 PF00034 Cytochrome c DGN16_03895 PF01926 50S ribosome-binding GTPase DGN16_03915 PF04107 Glutamate-cysteine ligase family 2(GCS2) DGN16_03920 PF00512 His Kinase A (phospho-acceptor) domain DGN16_03920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_03920 PF00672 HAMP domain DGN16_03925 PF00486 Transcriptional regulatory protein, C terminal DGN16_03925 PF00072 Response regulator receiver domain DGN16_03940 PF02583 Metal-sensitive transcriptional repressor DGN16_03945 PF00107 Zinc-binding dehydrogenase DGN16_03945 PF08240 Alcohol dehydrogenase GroES-like domain DGN16_03950 PF04828 Glutathione-dependent formaldehyde-activating enzyme DGN16_03955 PF00756 Putative esterase DGN16_03965 PF00392 Bacterial regulatory proteins, gntR family DGN16_03965 PF00155 Aminotransferase class I and II DGN16_03970 PF02567 Phenazine biosynthesis-like protein DGN16_03990 PF00005 ABC transporter DGN16_03990 PF12848 ABC transporter DGN16_04000 PF00464 Serine hydroxymethyltransferase DGN16_04005 PF03477 ATP cone domain DGN16_04015 PF01872 RibD C-terminal domain DGN16_04015 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DGN16_04025 PF00677 Lumazine binding domain DGN16_04030 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DGN16_04030 PF00925 GTP cyclohydrolase II DGN16_04035 PF00885 6,7-dimethyl-8-ribityllumazine synthase DGN16_04040 PF01029 NusB family DGN16_04045 PF00586 AIR synthase related protein, N-terminal domain DGN16_04045 PF02769 AIR synthase related protein, C-terminal domain DGN16_04070 PF03814 Potassium-transporting ATPase A subunit DGN16_04080 PF02669 K+-transporting ATPase, c chain DGN16_04085 PF13493 Domain of unknown function (DUF4118) DGN16_04085 PF13492 GAF domain DGN16_04085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_04085 PF00512 His Kinase A (phospho-acceptor) domain DGN16_04085 PF02702 Osmosensitive K+ channel His kinase sensor domain DGN16_04090 PF00486 Transcriptional regulatory protein, C terminal DGN16_04090 PF00072 Response regulator receiver domain DGN16_04095 PF02913 FAD linked oxidases, C-terminal domain DGN16_04095 PF01565 FAD binding domain DGN16_04100 PF04307 LexA-binding, inner membrane-associated putative hydrolase DGN16_04105 PF02021 Uncharacterised protein family UPF0102 DGN16_04115 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DGN16_04130 PF02381 MraZ protein, putative antitoxin-like DGN16_04135 PF01795 MraW methylase family DGN16_04140 PF04999 Cell division protein FtsL DGN16_04145 PF03717 Penicillin-binding Protein dimerisation domain DGN16_04145 PF00905 Penicillin binding protein transpeptidase domain DGN16_04150 PF01225 Mur ligase family, catalytic domain DGN16_04150 PF02875 Mur ligase family, glutamate ligase domain DGN16_04150 PF08245 Mur ligase middle domain DGN16_04155 PF08245 Mur ligase middle domain DGN16_04155 PF01225 Mur ligase family, catalytic domain DGN16_04155 PF02875 Mur ligase family, glutamate ligase domain DGN16_04160 PF00953 Glycosyl transferase family 4 DGN16_04165 PF01098 Cell cycle protein DGN16_04170 PF04101 Glycosyltransferase family 28 C-terminal domain DGN16_04170 PF03033 Glycosyltransferase family 28 N-terminal domain DGN16_04175 PF01225 Mur ligase family, catalytic domain DGN16_04175 PF02875 Mur ligase family, glutamate ligase domain DGN16_04175 PF08245 Mur ligase middle domain DGN16_04180 PF07478 D-ala D-ala ligase C-terminus DGN16_04180 PF01820 D-ala D-ala ligase N-terminus DGN16_04185 PF03799 Cell division protein FtsQ DGN16_04185 PF08478 POTRA domain, FtsQ-type DGN16_04190 PF02491 SHS2 domain inserted in FTSA DGN16_04195 PF00091 Tubulin/FtsZ family, GTPase domain DGN16_04195 PF12327 FtsZ family, C-terminal domain DGN16_04200 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DGN16_04210 PF01476 LysM domain DGN16_04210 PF08525 Opacity-associated protein A N-terminal motif DGN16_04210 PF01551 Peptidase family M23 DGN16_04215 PF02810 SEC-C motif DGN16_04215 PF07517 SecA DEAD-like domain DGN16_04215 PF01043 SecA preprotein cross-linking domain DGN16_04215 PF07516 SecA Wing and Scaffold domain DGN16_04220 PF00293 NUDIX domain DGN16_04230 PF02219 Methylenetetrahydrofolate reductase DGN16_04245 PF14765 Polyketide synthase dehydratase DGN16_04245 PF00550 Phosphopantetheine attachment site DGN16_04245 PF08659 KR domain DGN16_04245 PF02801 Beta-ketoacyl synthase, C-terminal domain DGN16_04245 PF00107 Zinc-binding dehydrogenase DGN16_04245 PF16197 Ketoacyl-synthetase C-terminal extension DGN16_04245 PF00109 Beta-ketoacyl synthase, N-terminal domain DGN16_04245 PF08240 Alcohol dehydrogenase GroES-like domain DGN16_04245 PF00698 Acyl transferase domain DGN16_04250 PF00082 Subtilase family DGN16_04250 PF09286 Pro-kumamolisin, activation domain DGN16_04260 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DGN16_04270 PF00128 Alpha amylase, catalytic domain DGN16_04300 PF00685 Sulfotransferase domain DGN16_04310 PF13649 Methyltransferase domain DGN16_04315 PF05221 S-adenosyl-L-homocysteine hydrolase DGN16_04315 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DGN16_04325 PF00311 Phosphoenolpyruvate carboxylase DGN16_04345 PF01389 OmpA-like transmembrane domain DGN16_04345 PF00691 OmpA family DGN16_04360 PF00328 Histidine phosphatase superfamily (branch 2) DGN16_04365 PF02773 S-adenosylmethionine synthetase, C-terminal domain DGN16_04365 PF02772 S-adenosylmethionine synthetase, central domain DGN16_04365 PF00438 S-adenosylmethionine synthetase, N-terminal domain DGN16_04375 PF13649 Methyltransferase domain DGN16_04380 PF01207 Dihydrouridine synthase (Dus) DGN16_04390 PF00294 pfkB family carbohydrate kinase DGN16_04395 PF07662 Na+ dependent nucleoside transporter C-terminus DGN16_04395 PF07670 Nucleoside recognition DGN16_04395 PF01773 Na+ dependent nucleoside transporter N-terminus DGN16_04405 PF00248 Aldo/keto reductase family DGN16_04415 PF07715 TonB-dependent Receptor Plug Domain DGN16_04415 PF00593 TonB dependent receptor DGN16_04435 PF00528 Binding-protein-dependent transport system inner membrane component DGN16_04440 PF00005 ABC transporter DGN16_04450 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DGN16_04460 PF00005 ABC transporter DGN16_04465 PF13472 GDSL-like Lipase/Acylhydrolase family DGN16_04470 PF00072 Response regulator receiver domain DGN16_04470 PF00486 Transcriptional regulatory protein, C terminal DGN16_04475 PF08521 Two-component sensor kinase N-terminal DGN16_04475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_04475 PF00512 His Kinase A (phospho-acceptor) domain DGN16_04485 PF01219 Prokaryotic diacylglycerol kinase DGN16_04505 PF01790 Prolipoprotein diacylglyceryl transferase DGN16_04510 PF00303 Thymidylate synthase DGN16_04520 PF00186 Dihydrofolate reductase DGN16_04525 PF00158 Sigma-54 interaction domain DGN16_04530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DGN16_04530 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DGN16_04535 PF00005 ABC transporter DGN16_04540 PF00528 Binding-protein-dependent transport system inner membrane component DGN16_04550 PF00296 Luciferase-like monooxygenase DGN16_04555 PF03358 NADPH-dependent FMN reductase DGN16_04575 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DGN16_04580 PF00528 Binding-protein-dependent transport system inner membrane component DGN16_04585 PF00528 Binding-protein-dependent transport system inner membrane component DGN16_04585 PF12911 N-terminal TM domain of oligopeptide transport permease C DGN16_04590 PF00005 ABC transporter DGN16_04590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DGN16_04595 PF00149 Calcineurin-like phosphoesterase DGN16_04600 PF04379 ApaG domain DGN16_04605 PF00398 Ribosomal RNA adenine dimethylase DGN16_04610 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DGN16_04615 PF00639 PPIC-type PPIASE domain DGN16_04615 PF09312 SurA N-terminal domain DGN16_04620 PF04453 LPS transport system D DGN16_04620 PF03968 OstA-like protein DGN16_04645 PF00850 Histone deacetylase domain DGN16_04650 PF01923 Cobalamin adenosyltransferase DGN16_04665 PF01494 FAD binding domain DGN16_04670 PF01494 FAD binding domain DGN16_04690 PF07729 FCD domain DGN16_04690 PF00392 Bacterial regulatory proteins, gntR family DGN16_04695 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DGN16_04700 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit DGN16_04700 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DGN16_04705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN16_04705 PF03466 LysR substrate binding domain DGN16_04715 PF00171 Aldehyde dehydrogenase family DGN16_04720 PF00378 Enoyl-CoA hydratase/isomerase DGN16_04745 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DGN16_04745 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DGN16_04750 PF01728 FtsJ-like methyltransferase DGN16_04750 PF18125 RlmM ferredoxin-like domain DGN16_04775 PF00892 EamA-like transporter family DGN16_04785 PF00749 tRNA synthetases class I (E and Q), catalytic domain DGN16_04785 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DGN16_04805 PF00990 Diguanylate cyclase, GGDEF domain DGN16_04805 PF00072 Response regulator receiver domain DGN16_04810 PF17149 Periplasmic sensor domain found in signal transduction proteins DGN16_04810 PF00672 HAMP domain DGN16_04810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_04810 PF00512 His Kinase A (phospho-acceptor) domain DGN16_04810 PF01627 Hpt domain DGN16_04810 PF00072 Response regulator receiver domain DGN16_04815 PF00072 Response regulator receiver domain DGN16_04815 PF00196 Bacterial regulatory proteins, luxR family DGN16_04825 PF01625 Peptide methionine sulfoxide reductase DGN16_04835 PF00923 Transaldolase/Fructose-6-phosphate aldolase DGN16_04840 PF01272 Transcription elongation factor, GreA/GreB, C-term DGN16_04840 PF14760 Rnk N-terminus DGN16_04850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN16_04850 PF03466 LysR substrate binding domain DGN16_04855 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGN16_04855 PF13192 Thioredoxin domain DGN16_04860 PF10417 C-terminal domain of 1-Cys peroxiredoxin DGN16_04860 PF00578 AhpC/TSA family DGN16_04865 PF05175 Methyltransferase small domain DGN16_04865 PF17827 PrmC N-terminal domain DGN16_04870 PF00561 alpha/beta hydrolase fold DGN16_04880 PF00293 NUDIX domain DGN16_04885 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DGN16_04885 PF00476 DNA polymerase family A DGN16_04885 PF01367 5'-3' exonuclease, C-terminal SAM fold DGN16_04885 PF01612 3'-5' exonuclease DGN16_04905 PF05598 Transposase domain (DUF772) DGN16_04905 PF01609 Transposase DDE domain DGN16_04920 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DGN16_04920 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DGN16_04920 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DGN16_04940 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DGN16_04945 PF02233 NAD(P) transhydrogenase beta subunit DGN16_04965 PF01063 Amino-transferase class IV DGN16_04970 PF00082 Subtilase family DGN16_04970 PF04151 Bacterial pre-peptidase C-terminal domain DGN16_04975 PF00082 Subtilase family DGN16_04975 PF04151 Bacterial pre-peptidase C-terminal domain DGN16_04980 PF00082 Subtilase family DGN16_04980 PF04151 Bacterial pre-peptidase C-terminal domain DGN16_04985 PF04073 Aminoacyl-tRNA editing domain DGN16_05005 PF03358 NADPH-dependent FMN reductase DGN16_05010 PF03631 Virulence factor BrkB DGN16_05015 PF08534 Redoxin DGN16_05020 PF00708 Acylphosphatase DGN16_05030 PF03976 Polyphosphate kinase 2 (PPK2) DGN16_05035 PF00994 Probable molybdopterin binding domain DGN16_05045 PF03462 PCRF domain DGN16_05045 PF00472 RF-1 domain DGN16_05050 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DGN16_05050 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DGN16_05050 PF01488 Shikimate / quinate 5-dehydrogenase DGN16_05060 PF03550 Outer membrane lipoprotein LolB DGN16_05065 PF08544 GHMP kinases C terminal DGN16_05065 PF00288 GHMP kinases N terminal domain DGN16_05075 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DGN16_05075 PF14572 Phosphoribosyl synthetase-associated domain DGN16_05080 PF14693 Ribosomal protein TL5, C-terminal domain DGN16_05080 PF01386 Ribosomal L25p family DGN16_05085 PF01195 Peptidyl-tRNA hydrolase DGN16_05090 PF06071 Protein of unknown function (DUF933) DGN16_05090 PF01926 50S ribosome-binding GTPase DGN16_05110 PF00009 Elongation factor Tu GTP binding domain DGN16_05110 PF03144 Elongation factor Tu domain 2 DGN16_05110 PF03143 Elongation factor Tu C-terminal domain DGN16_05120 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DGN16_05125 PF00467 KOW motif DGN16_05125 PF02357 Transcription termination factor nusG DGN16_05130 PF00298 Ribosomal protein L11, RNA binding domain DGN16_05130 PF03946 Ribosomal protein L11, N-terminal domain DGN16_05135 PF00687 Ribosomal protein L1p/L10e family DGN16_05140 PF00466 Ribosomal protein L10 DGN16_05145 PF16320 Ribosomal protein L7/L12 dimerisation domain DGN16_05145 PF00542 Ribosomal protein L7/L12 C-terminal domain DGN16_05150 PF04563 RNA polymerase beta subunit DGN16_05150 PF10385 RNA polymerase beta subunit external 1 domain DGN16_05150 PF04565 RNA polymerase Rpb2, domain 3 DGN16_05150 PF04561 RNA polymerase Rpb2, domain 2 DGN16_05150 PF00562 RNA polymerase Rpb2, domain 6 DGN16_05150 PF04560 RNA polymerase Rpb2, domain 7 DGN16_05155 PF04997 RNA polymerase Rpb1, domain 1 DGN16_05155 PF00623 RNA polymerase Rpb1, domain 2 DGN16_05155 PF04983 RNA polymerase Rpb1, domain 3 DGN16_05155 PF04998 RNA polymerase Rpb1, domain 5 DGN16_05155 PF05000 RNA polymerase Rpb1, domain 4 DGN16_05160 PF00164 Ribosomal protein S12/S23 DGN16_05165 PF00177 Ribosomal protein S7p/S5e DGN16_05170 PF00679 Elongation factor G C-terminus DGN16_05170 PF14492 Elongation Factor G, domain II DGN16_05170 PF03764 Elongation factor G, domain IV DGN16_05170 PF00009 Elongation factor Tu GTP binding domain DGN16_05170 PF03144 Elongation factor Tu domain 2 DGN16_05175 PF03143 Elongation factor Tu C-terminal domain DGN16_05175 PF00009 Elongation factor Tu GTP binding domain DGN16_05175 PF03144 Elongation factor Tu domain 2 DGN16_05180 PF00338 Ribosomal protein S10p/S20e DGN16_05185 PF00297 Ribosomal protein L3 DGN16_05190 PF00573 Ribosomal protein L4/L1 family DGN16_05195 PF00276 Ribosomal protein L23 DGN16_05200 PF03947 Ribosomal Proteins L2, C-terminal domain DGN16_05200 PF00181 Ribosomal Proteins L2, RNA binding domain DGN16_05205 PF00203 Ribosomal protein S19 DGN16_05210 PF00237 Ribosomal protein L22p/L17e DGN16_05215 PF07650 KH domain DGN16_05215 PF00189 Ribosomal protein S3, C-terminal domain DGN16_05220 PF00252 Ribosomal protein L16p/L10e DGN16_05225 PF00831 Ribosomal L29 protein DGN16_05230 PF00366 Ribosomal protein S17 DGN16_05235 PF00238 Ribosomal protein L14p/L23e DGN16_05240 PF00467 KOW motif DGN16_05240 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DGN16_05245 PF00281 Ribosomal protein L5 DGN16_05245 PF00673 ribosomal L5P family C-terminus DGN16_05250 PF00253 Ribosomal protein S14p/S29e DGN16_05255 PF00410 Ribosomal protein S8 DGN16_05260 PF00347 Ribosomal protein L6 DGN16_05265 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DGN16_05270 PF00333 Ribosomal protein S5, N-terminal domain DGN16_05270 PF03719 Ribosomal protein S5, C-terminal domain DGN16_05275 PF00327 Ribosomal protein L30p/L7e DGN16_05280 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DGN16_05285 PF00344 SecY translocase DGN16_05290 PF00416 Ribosomal protein S13/S18 DGN16_05295 PF00411 Ribosomal protein S11 DGN16_05300 PF00163 Ribosomal protein S4/S9 N-terminal domain DGN16_05300 PF01479 S4 domain DGN16_05305 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DGN16_05305 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DGN16_05305 PF01000 RNA polymerase Rpb3/RpoA insert domain DGN16_05310 PF01196 Ribosomal protein L17 DGN16_05315 PF02600 Disulfide bond formation protein DsbB DGN16_05335 PF01474 Class-II DAHP synthetase family DGN16_05350 PF01425 Amidase DGN16_05360 PF00679 Elongation factor G C-terminus DGN16_05360 PF00009 Elongation factor Tu GTP binding domain DGN16_05360 PF03144 Elongation factor Tu domain 2 DGN16_05365 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DGN16_05370 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DGN16_05370 PF00056 lactate/malate dehydrogenase, NAD binding domain DGN16_05375 PF00043 Glutathione S-transferase, C-terminal domain DGN16_05375 PF02798 Glutathione S-transferase, N-terminal domain DGN16_05390 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGN16_05390 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DGN16_05395 PF00107 Zinc-binding dehydrogenase DGN16_05395 PF08240 Alcohol dehydrogenase GroES-like domain DGN16_05405 PF05736 OprF membrane domain DGN16_05405 PF00691 OmpA family DGN16_05415 PF00849 RNA pseudouridylate synthase DGN16_05425 PF00155 Aminotransferase class I and II DGN16_05435 PF00528 Binding-protein-dependent transport system inner membrane component DGN16_05440 PF00528 Binding-protein-dependent transport system inner membrane component DGN16_05445 PF17850 CysA C-terminal regulatory domain DGN16_05445 PF12857 TOBE-like domain DGN16_05445 PF00005 ABC transporter DGN16_05455 PF00107 Zinc-binding dehydrogenase DGN16_05455 PF08240 Alcohol dehydrogenase GroES-like domain DGN16_05465 PF04185 Phosphoesterase family DGN16_05465 PF05506 Domain of unknown function (DUF756) DGN16_05470 PF10459 Peptidase S46 DGN16_05475 PF00300 Histidine phosphatase superfamily (branch 1) DGN16_05480 PF08245 Mur ligase middle domain DGN16_05480 PF02875 Mur ligase family, glutamate ligase domain DGN16_05495 PF00156 Phosphoribosyl transferase domain DGN16_05500 PF04305 Protein of unknown function (DUF455) DGN16_05520 PF00149 Calcineurin-like phosphoesterase DGN16_05525 PF01569 PAP2 superfamily DGN16_05530 PF13439 Glycosyltransferase Family 4 DGN16_05530 PF00534 Glycosyl transferases group 1 DGN16_05535 PF02541 Ppx/GppA phosphatase family DGN16_05540 PF13089 Polyphosphate kinase N-terminal domain DGN16_05540 PF17941 Polyphosphate kinase C-terminal domain 1 DGN16_05540 PF13090 Polyphosphate kinase C-terminal domain 2 DGN16_05540 PF02503 Polyphosphate kinase middle domain DGN16_05545 PF00989 PAS fold DGN16_05545 PF11808 Phosphate regulon sensor protein PhoR DGN16_05545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_05545 PF00512 His Kinase A (phospho-acceptor) domain DGN16_05550 PF00072 Response regulator receiver domain DGN16_05550 PF00486 Transcriptional regulatory protein, C terminal DGN16_05555 PF13181 Tetratricopeptide repeat DGN16_05555 PF01435 Peptidase family M48 DGN16_05560 PF00462 Glutaredoxin DGN16_05570 PF00180 Isocitrate/isopropylmalate dehydrogenase DGN16_05610 PF05698 Bacterial trigger factor protein (TF) C-terminus DGN16_05610 PF05697 Bacterial trigger factor protein (TF) DGN16_05615 PF00574 Clp protease DGN16_05620 PF10431 C-terminal, D2-small domain, of ClpB protein DGN16_05620 PF06689 ClpX C4-type zinc finger DGN16_05620 PF07724 AAA domain (Cdc48 subfamily) DGN16_05625 PF05362 Lon protease (S16) C-terminal proteolytic domain DGN16_05625 PF02190 ATP-dependent protease La (LON) substrate-binding domain DGN16_05625 PF00004 ATPase family associated with various cellular activities (AAA) DGN16_05630 PF00216 Bacterial DNA-binding protein DGN16_05660 PF05257 CHAP domain DGN16_05660 PF01476 LysM domain DGN16_05665 PF00753 Metallo-beta-lactamase superfamily DGN16_05665 PF16123 Hydroxyacylglutathione hydrolase C-terminus DGN16_05675 PF00075 RNase H DGN16_05680 PF00929 Exonuclease DGN16_05700 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DGN16_05710 PF00753 Metallo-beta-lactamase superfamily DGN16_05710 PF12706 Beta-lactamase superfamily domain DGN16_05715 PF06463 Molybdenum Cofactor Synthesis C DGN16_05715 PF04055 Radical SAM superfamily DGN16_05725 PF01967 MoaC family DGN16_05730 PF02597 ThiS family DGN16_05735 PF02391 MoaE protein DGN16_05765 PF01609 Transposase DDE domain DGN16_05765 PF05598 Transposase domain (DUF772) DGN16_05780 PF00872 Transposase, Mutator family DGN16_05800 PF05598 Transposase domain (DUF772) DGN16_05800 PF01609 Transposase DDE domain DGN16_05840 PF00872 Transposase, Mutator family DGN16_05855 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding DGN16_05855 PF12169 DNA polymerase III subunits gamma and tau domain III DGN16_05855 PF12170 DNA polymerase III tau subunit V interacting with alpha DGN16_05860 PF02575 YbaB/EbfC DNA-binding family DGN16_05865 PF02132 RecR protein DGN16_05865 PF13662 Toprim domain DGN16_05870 PF01230 HIT domain DGN16_05880 PF11992 Domain of unknown function (DUF3488) DGN16_05880 PF13559 Domain of unknown function (DUF4129) DGN16_05880 PF01841 Transglutaminase-like superfamily DGN16_05890 PF17863 AAA lid domain DGN16_05890 PF07726 ATPase family associated with various cellular activities (AAA) DGN16_05915 PF02545 Maf-like protein DGN16_05920 PF02620 Large ribosomal RNA subunit accumulation protein YceD DGN16_05925 PF01783 Ribosomal L32p protein family DGN16_05930 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DGN16_05930 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DGN16_05940 PF00698 Acyl transferase domain DGN16_05950 PF00550 Phosphopantetheine attachment site DGN16_05955 PF02801 Beta-ketoacyl synthase, C-terminal domain DGN16_05955 PF00109 Beta-ketoacyl synthase, N-terminal domain DGN16_05960 PF04715 Anthranilate synthase component I, N terminal region DGN16_05960 PF00425 chorismate binding enzyme DGN16_05965 PF02618 YceG-like family DGN16_05970 PF09115 DNA polymerase III, delta subunit, C terminal DGN16_05990 PF00158 Sigma-54 interaction domain DGN16_05990 PF06506 Propionate catabolism activator DGN16_05990 PF02954 Bacterial regulatory protein, Fis family DGN16_06000 PF00285 Citrate synthase, C-terminal domain DGN16_06005 PF00330 Aconitase family (aconitate hydratase) DGN16_06005 PF00694 Aconitase C-terminal domain DGN16_06015 PF04303 PrpF protein DGN16_06020 PF07715 TonB-dependent Receptor Plug Domain DGN16_06020 PF00593 TonB dependent receptor DGN16_06035 PF00207 Alpha-2-macroglobulin family DGN16_06035 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain DGN16_06035 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain DGN16_06035 PF11974 Bacterial alpha-2-macroglobulin MG3 domain DGN16_06035 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain DGN16_06035 PF17962 Bacterial macroglobulin domain 6 DGN16_06035 PF01835 MG2 domain DGN16_06035 PF07703 Alpha-2-macroglobulin bait region domain DGN16_06055 PF06832 Penicillin-Binding Protein C-terminus Family DGN16_06055 PF00912 Transglycosylase DGN16_06055 PF00905 Penicillin binding protein transpeptidase domain DGN16_06065 PF08534 Redoxin DGN16_06075 PF00226 DnaJ domain DGN16_06075 PF01556 DnaJ C terminal domain DGN16_06080 PF00072 Response regulator receiver domain DGN16_06085 PF12221 Bacterial membrane protein N terminal DGN16_06085 PF01145 SPFH domain / Band 7 family DGN16_06090 PF01145 SPFH domain / Band 7 family DGN16_06100 PF00709 Adenylosuccinate synthetase DGN16_06115 PF00440 Bacterial regulatory proteins, tetR family DGN16_06160 PF02384 N-6 DNA Methylase DGN16_06165 PF08780 Nucleotidyltransferase substrate binding protein like DGN16_06175 PF05598 Transposase domain (DUF772) DGN16_06175 PF01609 Transposase DDE domain DGN16_06180 PF01420 Type I restriction modification DNA specificity domain DGN16_06195 PF05598 Transposase domain (DUF772) DGN16_06195 PF01609 Transposase DDE domain DGN16_06205 PF11867 Domain of unknown function (DUF3387) DGN16_06205 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DGN16_06205 PF18766 SWI2/SNF2 ATPase DGN16_06235 PF00300 Histidine phosphatase superfamily (branch 1) DGN16_06235 PF13456 Reverse transcriptase-like DGN16_06240 PF01256 Carbohydrate kinase DGN16_06250 PF01609 Transposase DDE domain DGN16_06250 PF05598 Transposase domain (DUF772) DGN16_06260 PF00723 Glycosyl hydrolases family 15 DGN16_06280 PF07971 Glycosyl hydrolase family 92 DGN16_06280 PF17678 Glycosyl hydrolase family 92 N-terminal domain DGN16_06285 PF00106 short chain dehydrogenase DGN16_06300 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGN16_06325 PF17755 UvrA DNA-binding domain DGN16_06335 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DGN16_06335 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DGN16_06340 PF03450 CO dehydrogenase flavoprotein C-terminal domain DGN16_06340 PF00941 FAD binding domain in molybdopterin dehydrogenase DGN16_06345 PF00111 2Fe-2S iron-sulfur cluster binding domain DGN16_06345 PF01799 [2Fe-2S] binding domain DGN16_06380 PF01726 LexA DNA binding domain DGN16_06380 PF00717 Peptidase S24-like DGN16_06395 PF07733 Bacterial DNA polymerase III alpha NTPase domain DGN16_06395 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DGN16_06395 PF14579 Helix-hairpin-helix motif DGN16_06395 PF02811 PHP domain DGN16_06410 PF03169 OPT oligopeptide transporter protein DGN16_06425 PF00326 Prolyl oligopeptidase family DGN16_06425 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region DGN16_06425 PF07676 WD40-like Beta Propeller Repeat DGN16_06440 PF12833 Helix-turn-helix domain DGN16_06440 PF02311 AraC-like ligand binding domain DGN16_06470 PF00199 Catalase DGN16_06470 PF18011 C-terminal domain found in long catalases DGN16_06470 PF06628 Catalase-related immune-responsive DGN16_06475 PF00248 Aldo/keto reductase family DGN16_06480 PF00135 Carboxylesterase family DGN16_06485 PF02347 Glycine cleavage system P-protein DGN16_06490 PF07690 Major Facilitator Superfamily DGN16_06505 PF08019 Phosphoethanolamine transferase EptA/EptB DGN16_06505 PF00884 Sulfatase DGN16_06520 PF00072 Response regulator receiver domain DGN16_06520 PF00486 Transcriptional regulatory protein, C terminal DGN16_06525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_06525 PF08521 Two-component sensor kinase N-terminal DGN16_06525 PF00512 His Kinase A (phospho-acceptor) domain DGN16_06535 PF03776 Septum formation topological specificity factor MinE DGN16_06540 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DGN16_06545 PF05209 Septum formation inhibitor MinC, N-terminal domain DGN16_06545 PF03775 Septum formation inhibitor MinC, C-terminal domain DGN16_06560 PF07730 Histidine kinase DGN16_06565 PF00072 Response regulator receiver domain DGN16_06565 PF00196 Bacterial regulatory proteins, luxR family DGN16_06580 PF00730 HhH-GPD superfamily base excision DNA repair protein DGN16_06610 PF02222 ATP-grasp domain DGN16_06620 PF04376 Arginine-tRNA-protein transferase, N terminus DGN16_06620 PF04377 Arginine-tRNA-protein transferase, C terminus DGN16_06645 PF00378 Enoyl-CoA hydratase/isomerase DGN16_06660 PF00005 ABC transporter DGN16_06660 PF17755 UvrA DNA-binding domain DGN16_06660 PF17760 UvrA interaction domain DGN16_06665 PF00829 Ribosomal prokaryotic L21 protein DGN16_06670 PF01016 Ribosomal L27 protein DGN16_06675 PF01018 GTP1/OBG DGN16_06675 PF01926 50S ribosome-binding GTPase DGN16_06680 PF01649 Ribosomal protein S20 DGN16_06685 PF03023 Lipid II flippase MurJ DGN16_06690 PF01687 Riboflavin kinase DGN16_06690 PF06574 FAD synthetase DGN16_06695 PF00133 tRNA synthetases class I (I, L, M and V) DGN16_06695 PF08264 Anticodon-binding domain of tRNA DGN16_06695 PF06827 Zinc finger found in FPG and IleRS DGN16_06700 PF01252 Signal peptidase (SPase) II DGN16_06705 PF02401 LytB protein DGN16_06735 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DGN16_06735 PF06481 COX Aromatic Rich Motif DGN16_06740 PF00115 Cytochrome C and Quinol oxidase polypeptide I DGN16_06745 PF00510 Cytochrome c oxidase subunit III DGN16_06750 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DGN16_06760 PF18073 Rubredoxin metal binding domain DGN16_06765 PF00872 Transposase, Mutator family DGN16_06770 PF05656 Protein of unknown function (DUF805) DGN16_06780 PF12833 Helix-turn-helix domain DGN16_06785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_06785 PF00183 Hsp90 protein DGN16_06795 PF01740 STAS domain DGN16_06795 PF08678 Rsbr N terminal DGN16_06800 PF01740 STAS domain DGN16_06805 PF13581 Histidine kinase-like ATPase domain DGN16_06815 PF17149 Periplasmic sensor domain found in signal transduction proteins DGN16_06815 PF00512 His Kinase A (phospho-acceptor) domain DGN16_06815 PF01627 Hpt domain DGN16_06815 PF00672 HAMP domain DGN16_06815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_06815 PF00072 Response regulator receiver domain DGN16_06820 PF08448 PAS fold DGN16_06820 PF13188 PAS domain DGN16_06820 PF00072 Response regulator receiver domain DGN16_06820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_06820 PF00512 His Kinase A (phospho-acceptor) domain DGN16_06830 PF07715 TonB-dependent Receptor Plug Domain DGN16_06830 PF00593 TonB dependent receptor DGN16_06835 PF00085 Thioredoxin DGN16_06840 PF07237 Protein of unknown function (DUF1428) DGN16_06850 PF13493 Domain of unknown function (DUF4118) DGN16_06850 PF13492 GAF domain DGN16_06850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_06850 PF00512 His Kinase A (phospho-acceptor) domain DGN16_06850 PF02702 Osmosensitive K+ channel His kinase sensor domain DGN16_06855 PF01339 CheB methylesterase DGN16_06860 PF01739 CheR methyltransferase, SAM binding domain DGN16_06860 PF03705 CheR methyltransferase, all-alpha domain DGN16_06865 PF00672 HAMP domain DGN16_06865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_06865 PF00512 His Kinase A (phospho-acceptor) domain DGN16_06865 PF01627 Hpt domain DGN16_06865 PF00072 Response regulator receiver domain DGN16_06865 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DGN16_06870 PF13426 PAS domain DGN16_06870 PF00072 Response regulator receiver domain DGN16_06870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_06875 PF00072 Response regulator receiver domain DGN16_06885 PF06964 Alpha-L-arabinofuranosidase C-terminal domain DGN16_06890 PF01263 Aldose 1-epimerase DGN16_06895 PF01578 Cytochrome C assembly protein DGN16_06900 PF00448 SRP54-type protein, GTPase domain DGN16_06900 PF02881 SRP54-type protein, helical bundle domain DGN16_06900 PF02978 Signal peptide binding domain DGN16_06905 PF03060 Nitronate monooxygenase DGN16_06915 PF00886 Ribosomal protein S16 DGN16_06920 PF01782 RimM N-terminal domain DGN16_06920 PF05239 PRC-barrel domain DGN16_06925 PF01746 tRNA (Guanine-1)-methyltransferase DGN16_06930 PF01245 Ribosomal protein L19 DGN16_06935 PF01554 MatE DGN16_06955 PF01479 S4 domain DGN16_06960 PF00141 Peroxidase DGN16_06970 PF01624 MutS domain I DGN16_06970 PF05188 MutS domain II DGN16_06970 PF05192 MutS domain III DGN16_06970 PF05190 MutS family domain IV DGN16_06970 PF00488 MutS domain V DGN16_06975 PF00872 Transposase, Mutator family DGN16_06980 PF01527 Transposase DGN16_07000 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DGN16_07000 PF02837 Glycosyl hydrolases family 2, sugar binding domain DGN16_07000 PF13287 Fn3 associated DGN16_07000 PF00703 Glycosyl hydrolases family 2 DGN16_07000 PF16355 Domain of unknown function (DUF4982) DGN16_07005 PF07745 Glycosyl hydrolase family 53 DGN16_07015 PF06114 IrrE N-terminal-like domain DGN16_07015 PF09856 Predicted transcriptional regulator (DUF2083) DGN16_07015 PF01381 Helix-turn-helix DGN16_07020 PF00171 Aldehyde dehydrogenase family DGN16_07025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DGN16_07025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DGN16_07025 PF02770 Acyl-CoA dehydrogenase, middle domain DGN16_07030 PF00378 Enoyl-CoA hydratase/isomerase DGN16_07035 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DGN16_07035 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DGN16_07035 PF00378 Enoyl-CoA hydratase/isomerase DGN16_07040 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DGN16_07040 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DGN16_07045 PF01545 Cation efflux family DGN16_07055 PF01609 Transposase DDE domain DGN16_07055 PF05598 Transposase domain (DUF772) DGN16_07060 PF05598 Transposase domain (DUF772) DGN16_07060 PF01609 Transposase DDE domain DGN16_07065 PF01609 Transposase DDE domain DGN16_07065 PF05598 Transposase domain (DUF772) DGN16_07080 PF01609 Transposase DDE domain DGN16_07080 PF05598 Transposase domain (DUF772) DGN16_07085 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DGN16_07085 PF00378 Enoyl-CoA hydratase/isomerase DGN16_07085 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DGN16_07090 PF04542 Sigma-70 region 2 DGN16_07090 PF08281 Sigma-70, region 4 DGN16_07100 PF13180 PDZ domain DGN16_07105 PF06421 GTP-binding protein LepA C-terminus DGN16_07105 PF00009 Elongation factor Tu GTP binding domain DGN16_07105 PF03144 Elongation factor Tu domain 2 DGN16_07105 PF00679 Elongation factor G C-terminus DGN16_07110 PF10502 Signal peptidase, peptidase S26 DGN16_07120 PF14622 Ribonuclease-III-like DGN16_07120 PF00035 Double-stranded RNA binding motif DGN16_07125 PF07650 KH domain DGN16_07125 PF01926 50S ribosome-binding GTPase DGN16_07130 PF02565 Recombination protein O C terminal DGN16_07130 PF11967 Recombination protein O N terminal DGN16_07140 PF05958 tRNA (Uracil-5-)-methyltransferase DGN16_07145 PF01928 CYTH domain DGN16_07150 PF01323 DSBA-like thioredoxin domain DGN16_07155 PF01593 Flavin containing amine oxidoreductase DGN16_07160 PF04244 Deoxyribodipyrimidine photo-lyase-related protein DGN16_07165 PF00933 Glycosyl hydrolase family 3 N terminal domain DGN16_07170 PF00156 Phosphoribosyl transferase domain DGN16_07175 PF01048 Phosphorylase superfamily DGN16_07180 PF00313 'Cold-shock' DNA-binding domain DGN16_07185 PF01494 FAD binding domain DGN16_07195 PF00271 Helicase conserved C-terminal domain DGN16_07195 PF00270 DEAD/DEAH box helicase DGN16_07195 PF08494 DEAD/H associated DGN16_07200 PF04679 ATP dependent DNA ligase C terminal region DGN16_07200 PF01068 ATP dependent DNA ligase domain DGN16_07200 PF04675 DNA ligase N terminus DGN16_07210 PF04679 ATP dependent DNA ligase C terminal region DGN16_07210 PF01068 ATP dependent DNA ligase domain DGN16_07210 PF04675 DNA ligase N terminus DGN16_07225 PF00990 Diguanylate cyclase, GGDEF domain DGN16_07225 PF00072 Response regulator receiver domain DGN16_07240 PF02803 Thiolase, C-terminal domain DGN16_07240 PF00108 Thiolase, N-terminal domain DGN16_07245 PF03797 Autotransporter beta-domain DGN16_07245 PF00082 Subtilase family DGN16_07245 PF12951 Passenger-associated-transport-repeat DGN16_07250 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DGN16_07250 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DGN16_07265 PF01863 Protein of unknown function DUF45 DGN16_07270 PF07043 Protein of unknown function (DUF1328) DGN16_07280 PF01258 Prokaryotic dksA/traR C4-type zinc finger DGN16_07300 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DGN16_07310 PF08274 PhnA Zinc-Ribbon DGN16_07310 PF03831 PhnA domain DGN16_07320 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DGN16_07325 PF07690 Major Facilitator Superfamily DGN16_07360 PF09924 Uncharacterised conserved protein (DUF2156) DGN16_07360 PF03706 Lysylphosphatidylglycerol synthase TM region DGN16_07370 PF01042 Endoribonuclease L-PSP DGN16_07415 PF04542 Sigma-70 region 2 DGN16_07415 PF04545 Sigma-70, region 4 DGN16_07440 PF04060 Putative Fe-S cluster DGN16_07450 PF09334 tRNA synthetases class I (M) DGN16_07450 PF01588 Putative tRNA binding domain DGN16_07465 PF01609 Transposase DDE domain DGN16_07465 PF05598 Transposase domain (DUF772) DGN16_07475 PF00005 ABC transporter DGN16_07475 PF13732 Domain of unknown function (DUF4162) DGN16_07480 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DGN16_07485 PF00324 Amino acid permease DGN16_07490 PF02574 Homocysteine S-methyltransferase DGN16_07500 PF02592 Putative vitamin uptake transporter DGN16_07530 PF03551 Transcriptional regulator PadR-like family DGN16_07550 PF03653 Uncharacterised protein family (UPF0093) DGN16_07565 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DGN16_07570 PF01336 OB-fold nucleic acid binding domain DGN16_07570 PF14579 Helix-hairpin-helix motif DGN16_07570 PF07733 Bacterial DNA polymerase III alpha NTPase domain DGN16_07570 PF02811 PHP domain DGN16_07570 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DGN16_07575 PF01351 Ribonuclease HII DGN16_07580 PF02684 Lipid-A-disaccharide synthetase DGN16_07585 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DGN16_07585 PF00132 Bacterial transferase hexapeptide (six repeats) DGN16_07590 PF07977 FabA-like domain DGN16_07595 PF00132 Bacterial transferase hexapeptide (six repeats) DGN16_07595 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DGN16_07605 PF01103 Surface antigen DGN16_07605 PF07244 Surface antigen variable number repeat DGN16_07610 PF17820 PDZ domain DGN16_07610 PF02163 Peptidase family M50 DGN16_07615 PF13288 DXP reductoisomerase C-terminal domain DGN16_07615 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DGN16_07615 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DGN16_07625 PF01255 Putative undecaprenyl diphosphate synthase DGN16_07630 PF01765 Ribosome recycling factor DGN16_07635 PF00696 Amino acid kinase family DGN16_07640 PF00990 Diguanylate cyclase, GGDEF domain DGN16_07640 PF00072 Response regulator receiver domain DGN16_07645 PF00889 Elongation factor TS DGN16_07650 PF00318 Ribosomal protein S2 DGN16_07685 PF00557 Metallopeptidase family M24 DGN16_07690 PF01966 HD domain DGN16_07690 PF01909 Nucleotidyltransferase domain DGN16_07690 PF08335 GlnD PII-uridylyltransferase DGN16_07695 PF00132 Bacterial transferase hexapeptide (six repeats) DGN16_07695 PF14602 Hexapeptide repeat of succinyl-transferase DGN16_07695 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal DGN16_07700 PF03960 ArsC family DGN16_07705 PF01546 Peptidase family M20/M25/M40 DGN16_07705 PF07687 Peptidase dimerisation domain DGN16_07710 PF00733 Asparagine synthase DGN16_07710 PF13537 Glutamine amidotransferase domain DGN16_07720 PF07715 TonB-dependent Receptor Plug Domain DGN16_07720 PF00593 TonB dependent receptor DGN16_07730 PF00210 Ferritin-like domain DGN16_07735 PF05724 Thiopurine S-methyltransferase (TPMT) DGN16_07740 PF03989 DNA gyrase C-terminal domain, beta-propeller DGN16_07740 PF00521 DNA gyrase/topoisomerase IV, subunit A DGN16_07755 PF02321 Outer membrane efflux protein DGN16_07760 PF00529 HlyD membrane-fusion protein of T1SS DGN16_07760 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGN16_07765 PF07690 Major Facilitator Superfamily DGN16_07775 PF01915 Glycosyl hydrolase family 3 C-terminal domain DGN16_07775 PF00933 Glycosyl hydrolase family 3 N terminal domain DGN16_07775 PF14310 Fibronectin type III-like domain DGN16_07785 PF00854 POT family DGN16_07810 PF12802 MarR family DGN16_07815 PF01432 Peptidase family M3 DGN16_07825 PF00255 Glutathione peroxidase DGN16_07830 PF00175 Oxidoreductase NAD-binding domain DGN16_07830 PF00970 Oxidoreductase FAD-binding domain DGN16_07835 PF00005 ABC transporter DGN16_07840 PF05681 Fumarate hydratase (Fumerase) DGN16_07840 PF05683 Fumarase C-terminus DGN16_07850 PF00484 Carbonic anhydrase DGN16_07855 PF02253 Phospholipase A1 DGN16_07865 PF00313 'Cold-shock' DNA-binding domain DGN16_07880 PF00899 ThiF family DGN16_07885 PF01026 TatD related DNase DGN16_07900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DGN16_07900 PF02770 Acyl-CoA dehydrogenase, middle domain DGN16_07900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DGN16_07910 PF02798 Glutathione S-transferase, N-terminal domain DGN16_07910 PF00043 Glutathione S-transferase, C-terminal domain DGN16_07920 PF13537 Glutamine amidotransferase domain DGN16_07920 PF00733 Asparagine synthase DGN16_07925 PF03358 NADPH-dependent FMN reductase DGN16_07930 PF03796 DnaB-like helicase C terminal domain DGN16_07930 PF00772 DnaB-like helicase N terminal domain DGN16_07935 PF00875 DNA photolyase DGN16_07935 PF03441 FAD binding domain of DNA photolyase DGN16_07940 PF05736 OprF membrane domain DGN16_07940 PF00691 OmpA family DGN16_07945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN16_07945 PF03466 LysR substrate binding domain DGN16_07960 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGN16_07965 PF00873 AcrB/AcrD/AcrF family DGN16_07970 PF00106 short chain dehydrogenase DGN16_07975 PF02321 Outer membrane efflux protein DGN16_07980 PF00990 Diguanylate cyclase, GGDEF domain DGN16_07990 PF00990 Diguanylate cyclase, GGDEF domain DGN16_08020 PF00872 Transposase, Mutator family DGN16_08025 PF13356 Arm DNA-binding domain DGN16_08025 PF00589 Phage integrase family DGN16_08040 PF01668 SmpB protein DGN16_08045 PF03364 Polyketide cyclase / dehydrase and lipid transport DGN16_08050 PF03658 RnfH family Ubiquitin DGN16_08055 PF04355 SmpA / OmlA family DGN16_08060 PF01475 Ferric uptake regulator family DGN16_08065 PF02463 RecF/RecN/SMC N terminal domain DGN16_08070 PF01628 HrcA protein C terminal domain DGN16_08070 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding DGN16_08075 PF01025 GrpE DGN16_08080 PF00012 Hsp70 protein DGN16_08085 PF00684 DnaJ central domain DGN16_08085 PF01556 DnaJ C terminal domain DGN16_08085 PF00226 DnaJ domain DGN16_08095 PF08543 Phosphomethylpyrimidine kinase DGN16_08120 PF00664 ABC transporter transmembrane region DGN16_08120 PF00005 ABC transporter DGN16_08120 PF03412 Peptidase C39 family DGN16_08125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN16_08125 PF03466 LysR substrate binding domain DGN16_08130 PF00664 ABC transporter transmembrane region DGN16_08130 PF00005 ABC transporter DGN16_08135 PF01205 Uncharacterized protein family UPF0029 DGN16_08140 PF03641 Possible lysine decarboxylase DGN16_08145 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DGN16_08145 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGN16_08150 PF02817 e3 binding domain DGN16_08150 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DGN16_08150 PF00364 Biotin-requiring enzyme DGN16_08155 PF02779 Transketolase, pyrimidine binding domain DGN16_08155 PF16870 2-oxoglutarate dehydrogenase C-terminal DGN16_08155 PF00676 Dehydrogenase E1 component DGN16_08155 PF16078 2-oxoglutarate dehydrogenase N-terminus DGN16_08165 PF08007 Cupin superfamily protein DGN16_08180 PF00206 Lyase DGN16_08180 PF08328 Adenylosuccinate lyase C-terminal DGN16_08190 PF03471 Transporter associated domain DGN16_08190 PF01595 Cyclin M transmembrane N-terminal domain DGN16_08190 PF00571 CBS domain DGN16_08195 PF00206 Lyase DGN16_08195 PF10415 Fumarase C C-terminus DGN16_08225 PF00005 ABC transporter DGN16_08230 PF00392 Bacterial regulatory proteins, gntR family DGN16_08240 PF00255 Glutathione peroxidase DGN16_08245 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DGN16_08245 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DGN16_08250 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DGN16_08250 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DGN16_08250 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DGN16_08255 PF04102 SlyX DGN16_08270 PF00356 Bacterial regulatory proteins, lacI family DGN16_08275 PF07690 Major Facilitator Superfamily DGN16_08280 PF00294 pfkB family carbohydrate kinase DGN16_08290 PF02965 Vitamin B12 dependent methionine synthase, activation domain DGN16_08290 PF02310 B12 binding domain DGN16_08290 PF02574 Homocysteine S-methyltransferase DGN16_08290 PF00809 Pterin binding enzyme DGN16_08290 PF02607 B12 binding domain DGN16_08295 PF02574 Homocysteine S-methyltransferase DGN16_08295 PF00809 Pterin binding enzyme DGN16_08300 PF01209 ubiE/COQ5 methyltransferase family DGN16_08305 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DGN16_08305 PF02770 Acyl-CoA dehydrogenase, middle domain DGN16_08305 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DGN16_08315 PF02770 Acyl-CoA dehydrogenase, middle domain DGN16_08315 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DGN16_08315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DGN16_08335 PF00575 S1 RNA binding domain DGN16_08335 PF08206 Ribonuclease B OB domain DGN16_08335 PF00773 RNB domain DGN16_08335 PF08461 Ribonuclease R winged-helix domain DGN16_08335 PF17876 Cold shock domain DGN16_08345 PF08032 RNA 2'-O ribose methyltransferase substrate binding DGN16_08345 PF00588 SpoU rRNA Methylase family DGN16_08355 PF00929 Exonuclease DGN16_08365 PF01895 PhoU domain DGN16_08370 PF00005 ABC transporter DGN16_08375 PF00528 Binding-protein-dependent transport system inner membrane component DGN16_08380 PF00528 Binding-protein-dependent transport system inner membrane component DGN16_08385 PF12849 PBP superfamily domain DGN16_08390 PF12849 PBP superfamily domain DGN16_08405 PF00484 Carbonic anhydrase DGN16_08410 PF01740 STAS domain DGN16_08410 PF00916 Sulfate permease family DGN16_08415 PF00730 HhH-GPD superfamily base excision DNA repair protein DGN16_08415 PF00633 Helix-hairpin-helix motif DGN16_08415 PF10576 Iron-sulfur binding domain of endonuclease III DGN16_08425 PF00378 Enoyl-CoA hydratase/isomerase DGN16_08430 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DGN16_08430 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DGN16_08435 PF00293 NUDIX domain DGN16_08440 PF00581 Rhodanese-like domain DGN16_08470 PF16326 ABC transporter C-terminal domain DGN16_08470 PF00005 ABC transporter DGN16_08470 PF12848 ABC transporter DGN16_08480 PF02926 THUMP domain DGN16_08480 PF01170 Putative RNA methylase family UPF0020 DGN16_08480 PF10672 S-adenosylmethionine-dependent methyltransferase DGN16_08485 PF01513 ATP-NAD kinase DGN16_08510 PF00929 Exonuclease DGN16_08510 PF08411 Exonuclease C-terminal DGN16_08515 PF01494 FAD binding domain DGN16_08520 PF00266 Aminotransferase class-V DGN16_08530 PF06052 3-hydroxyanthranilic acid dioxygenase DGN16_08535 PF00484 Carbonic anhydrase DGN16_08580 PF00072 Response regulator receiver domain DGN16_08580 PF00196 Bacterial regulatory proteins, luxR family DGN16_08585 PF01609 Transposase DDE domain DGN16_08585 PF05598 Transposase domain (DUF772) DGN16_08620 PF01336 OB-fold nucleic acid binding domain DGN16_08620 PF00152 tRNA synthetases class II (D, K and N) DGN16_08630 PF01521 Iron-sulphur cluster biosynthesis DGN16_08635 PF01250 Ribosomal protein S6 DGN16_08640 PF01084 Ribosomal protein S18 DGN16_08645 PF03948 Ribosomal protein L9, C-terminal domain DGN16_08645 PF01281 Ribosomal protein L9, N-terminal domain DGN16_08655 PF02463 RecF/RecN/SMC N terminal domain DGN16_08660 PF04354 ZipA, C-terminal FtsZ-binding domain DGN16_08670 PF00155 Aminotransferase class I and II DGN16_08675 PF00533 BRCA1 C Terminus (BRCT) domain DGN16_08675 PF01653 NAD-dependent DNA ligase adenylation domain DGN16_08675 PF03120 NAD-dependent DNA ligase OB-fold domain DGN16_08675 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DGN16_08675 PF12826 Helix-hairpin-helix motif DGN16_08680 PF00152 tRNA synthetases class II (D, K and N) DGN16_08695 PF01008 Initiation factor 2 subunit family DGN16_08700 PF03989 DNA gyrase C-terminal domain, beta-propeller DGN16_08700 PF00521 DNA gyrase/topoisomerase IV, subunit A DGN16_08705 PF13360 PQQ-like domain DGN16_08715 PF01175 Urocanase Rossmann-like domain DGN16_08715 PF17392 Urocanase C-terminal domain DGN16_08715 PF17391 Urocanase N-terminal domain DGN16_08725 PF00221 Aromatic amino acid lyase DGN16_08730 PF07969 Amidohydrolase family DGN16_08745 PF00392 Bacterial regulatory proteins, gntR family DGN16_08745 PF07702 UTRA domain DGN16_08770 PF01794 Ferric reductase like transmembrane component DGN16_08775 PF00174 Oxidoreductase molybdopterin binding domain DGN16_08780 PF00266 Aminotransferase class-V DGN16_08785 PF01842 ACT domain DGN16_08785 PF01817 Chorismate mutase type II DGN16_08785 PF00800 Prephenate dehydratase DGN16_08790 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DGN16_08805 PF03544 Gram-negative bacterial TonB protein C-terminal DGN16_08810 PF02403 Seryl-tRNA synthetase N-terminal domain DGN16_08810 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DGN16_08815 PF02525 Flavodoxin-like fold DGN16_08820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN16_08820 PF03466 LysR substrate binding domain DGN16_08840 PF00872 Transposase, Mutator family DGN16_08875 PF00672 HAMP domain DGN16_08875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN16_08875 PF02203 Tar ligand binding domain homologue DGN16_08880 PF01494 FAD binding domain DGN16_08895 PF00512 His Kinase A (phospho-acceptor) domain DGN16_08895 PF08448 PAS fold DGN16_08895 PF13188 PAS domain DGN16_08895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_08895 PF00072 Response regulator receiver domain DGN16_08900 PF01627 Hpt domain DGN16_08900 PF00512 His Kinase A (phospho-acceptor) domain DGN16_08900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_08900 PF00072 Response regulator receiver domain DGN16_08900 PF00672 HAMP domain DGN16_08900 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DGN16_08910 PF06745 KaiC DGN16_08915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_08915 PF00072 Response regulator receiver domain DGN16_08915 PF13426 PAS domain DGN16_08925 PF03918 Cytochrome C biogenesis protein DGN16_08930 PF08534 Redoxin DGN16_08935 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DGN16_08935 PF01578 Cytochrome C assembly protein DGN16_08940 PF03100 CcmE DGN16_08945 PF04995 Heme exporter protein D (CcmD) DGN16_08950 PF01578 Cytochrome C assembly protein DGN16_08955 PF00082 Subtilase family DGN16_08965 PF08281 Sigma-70, region 4 DGN16_08965 PF04542 Sigma-70 region 2 DGN16_08980 PF00034 Cytochrome c DGN16_08995 PF05523 WxcM-like, C-terminal DGN16_09015 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DGN16_09020 PF01943 Polysaccharide biosynthesis protein DGN16_09025 PF00535 Glycosyl transferase family 2 DGN16_09040 PF08241 Methyltransferase domain DGN16_09060 PF00534 Glycosyl transferases group 1 DGN16_09060 PF13579 Glycosyl transferase 4-like domain DGN16_09075 PF00005 ABC transporter DGN16_09080 PF00005 ABC transporter DGN16_09080 PF00664 ABC transporter transmembrane region DGN16_09085 PF00083 Sugar (and other) transporter DGN16_09095 PF00296 Luciferase-like monooxygenase DGN16_09105 PF01595 Cyclin M transmembrane N-terminal domain DGN16_09105 PF03471 Transporter associated domain DGN16_09105 PF00571 CBS domain DGN16_09120 PF01384 Phosphate transporter family DGN16_09140 PF01751 Toprim domain DGN16_09140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_09140 PF00986 DNA gyrase B subunit, carboxyl terminus DGN16_09140 PF00204 DNA gyrase B DGN16_09150 PF06418 CTP synthase N-terminus DGN16_09150 PF00117 Glutamine amidotransferase class-I DGN16_09155 PF00793 DAHP synthetase I family DGN16_09165 PF00113 Enolase, C-terminal TIM barrel domain DGN16_09165 PF03952 Enolase, N-terminal domain DGN16_09170 PF04977 Septum formation initiator DGN16_09175 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DGN16_09180 PF02542 YgbB family DGN16_09185 PF01142 tRNA pseudouridine synthase D (TruD) DGN16_09190 PF01713 Smr domain DGN16_09195 PF01975 Survival protein SurE DGN16_09205 PF09335 SNARE associated Golgi protein DGN16_09210 PF01551 Peptidase family M23 DGN16_09210 PF01476 LysM domain DGN16_09215 PF04430 Protein of unknown function (DUF498/DUF598) DGN16_09220 PF01985 CRS1 / YhbY (CRM) domain DGN16_09225 PF01728 FtsJ-like methyltransferase DGN16_09230 PF00004 ATPase family associated with various cellular activities (AAA) DGN16_09230 PF01434 Peptidase family M41 DGN16_09230 PF06480 FtsH Extracellular DGN16_09230 PF17862 AAA+ lid domain DGN16_09235 PF00809 Pterin binding enzyme DGN16_09245 PF17209 Hfq protein DGN16_09250 PF01926 50S ribosome-binding GTPase DGN16_09250 PF13167 GTP-binding GTPase N-terminal DGN16_09250 PF16360 GTP-binding GTPase Middle Region DGN16_09255 PF02464 Competence-damaged protein DGN16_09260 PF03109 ABC1 family DGN16_09265 PF00717 Peptidase S24-like DGN16_09265 PF01726 LexA DNA binding domain DGN16_09270 PF00154 recA bacterial DNA recombination protein DGN16_09280 PF02631 RecX family DGN16_09285 PF02272 DHHA1 domain DGN16_09285 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DGN16_09285 PF01411 tRNA synthetases class II (A) DGN16_09290 PF02599 Global regulator protein family DGN16_09305 PF13426 PAS domain DGN16_09305 PF08447 PAS fold DGN16_09305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN16_09310 PF17954 Quercetinase C-terminal cupin domain DGN16_09310 PF02678 Pirin DGN16_09315 PF03466 LysR substrate binding domain DGN16_09315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN16_09340 PF08543 Phosphomethylpyrimidine kinase DGN16_09355 PF13638 PIN domain DGN16_09355 PF02562 PhoH-like protein DGN16_09360 PF00578 AhpC/TSA family DGN16_09375 PF00701 Dihydrodipicolinate synthetase family DGN16_09385 PF00037 4Fe-4S binding domain DGN16_09385 PF11953 Domain of unknown function (DUF3470) DGN16_09390 PF05035 2-keto-3-deoxy-galactonokinase DGN16_09395 PF08450 SMP-30/Gluconolactonase/LRE-like region DGN16_09400 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DGN16_09400 PF13378 Enolase C-terminal domain-like DGN16_09405 PF01081 KDPG and KHG aldolase DGN16_09415 PF03466 LysR substrate binding domain DGN16_09415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN16_09440 PF08532 Beta-galactosidase trimerisation domain DGN16_09440 PF08533 Beta-galactosidase C-terminal domain DGN16_09440 PF02449 Beta-galactosidase DGN16_09445 PF01055 Glycosyl hydrolases family 31 DGN16_09445 PF16338 Domain of unknown function (DUF4968) DGN16_09445 PF17137 Domain of unknown function (DUF5110) DGN16_09455 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DGN16_09455 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DGN16_09465 PF00872 Transposase, Mutator family DGN16_09480 PF00872 Transposase, Mutator family DGN16_09515 PF01609 Transposase DDE domain DGN16_09515 PF05598 Transposase domain (DUF772) DGN16_09525 PF01520 N-acetylmuramoyl-L-alanine amidase DGN16_09530 PF02649 Type I GTP cyclohydrolase folE2 DGN16_09540 PF12626 Polymerase A arginine-rich C-terminus DGN16_09540 PF01743 Poly A polymerase head domain DGN16_09540 PF12627 Probable RNA and SrmB- binding site of polymerase A DGN16_09545 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DGN16_09550 PF02548 Ketopantoate hydroxymethyltransferase DGN16_09555 PF02569 Pantoate-beta-alanine ligase DGN16_09560 PF02261 Aspartate decarboxylase DGN16_09565 PF00342 Phosphoglucose isomerase DGN16_09590 PF14310 Fibronectin type III-like domain DGN16_09590 PF00933 Glycosyl hydrolase family 3 N terminal domain DGN16_09590 PF01915 Glycosyl hydrolase family 3 C-terminal domain DGN16_09600 PF00474 Sodium:solute symporter family DGN16_09605 PF00360 Phytochrome region DGN16_09605 PF00990 Diguanylate cyclase, GGDEF domain DGN16_09605 PF01590 GAF domain DGN16_09605 PF00563 EAL domain DGN16_09610 PF00150 Cellulase (glycosyl hydrolase family 5) DGN16_09610 PF02013 Cellulose or protein binding domain DGN16_09615 PF00072 Response regulator receiver domain DGN16_09625 PF04551 GcpE protein DGN16_09645 PF01177 Asp/Glu/Hydantoin racemase DGN16_09655 PF00892 EamA-like transporter family DGN16_09660 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DGN16_09660 PF01565 FAD binding domain DGN16_09665 PF01180 Dihydroorotate dehydrogenase DGN16_09680 PF00171 Aldehyde dehydrogenase family DGN16_09695 PF00535 Glycosyl transferase family 2 DGN16_09700 PF14883 Hypothetical glycosyl hydrolase family 13 DGN16_09700 PF01522 Polysaccharide deacetylase DGN16_09710 PF17287 POTRA domain DGN16_09710 PF08479 POTRA domain, ShlB-type DGN16_09710 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB DGN16_09775 PF00872 Transposase, Mutator family DGN16_09785 PF03073 TspO/MBR family DGN16_09790 PF00696 Amino acid kinase family DGN16_09790 PF01842 ACT domain DGN16_09790 PF13840 ACT domain DGN16_09790 PF00742 Homoserine dehydrogenase DGN16_09790 PF03447 Homoserine dehydrogenase, NAD binding domain DGN16_09795 PF00288 GHMP kinases N terminal domain DGN16_09795 PF08544 GHMP kinases C terminal DGN16_09805 PF14821 Threonine synthase N terminus DGN16_09805 PF00291 Pyridoxal-phosphate dependent enzyme DGN16_09815 PF13545 Crp-like helix-turn-helix domain DGN16_09815 PF00027 Cyclic nucleotide-binding domain DGN16_09820 PF13393 Histidyl-tRNA synthetase DGN16_09820 PF03129 Anticodon binding domain DGN16_09830 PF08029 HisG, C-terminal domain DGN16_09830 PF01634 ATP phosphoribosyltransferase DGN16_09835 PF00815 Histidinol dehydrogenase DGN16_09840 PF00155 Aminotransferase class I and II DGN16_09845 PF00475 Imidazoleglycerol-phosphate dehydratase DGN16_09850 PF00117 Glutamine amidotransferase class-I DGN16_09855 PF00977 Histidine biosynthesis protein DGN16_09860 PF00977 Histidine biosynthesis protein DGN16_09865 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DGN16_09865 PF01502 Phosphoribosyl-AMP cyclohydrolase DGN16_09885 PF03079 ARD/ARD' family DGN16_09890 PF00596 Class II Aldolase and Adducin N-terminal domain DGN16_09895 PF13520 Amino acid permease DGN16_09900 PF13520 Amino acid permease DGN16_09910 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DGN16_09910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DGN16_09910 PF01842 ACT domain DGN16_09915 PF01565 FAD binding domain DGN16_09915 PF02913 FAD linked oxidases, C-terminal domain DGN16_09935 PF08207 Elongation factor P (EF-P) KOW-like domain DGN16_09935 PF09285 Elongation factor P, C-terminal DGN16_09935 PF01132 Elongation factor P (EF-P) OB domain DGN16_09940 PF00106 short chain dehydrogenase DGN16_09945 PF00682 HMGL-like DGN16_09955 PF00378 Enoyl-CoA hydratase/isomerase DGN16_09965 PF02421 Ferrous iron transport protein B DGN16_09965 PF07664 Ferrous iron transport protein B C terminus DGN16_09965 PF07670 Nucleoside recognition DGN16_09980 PF00155 Aminotransferase class I and II DGN16_09985 PF03475 3-alpha domain DGN16_09985 PF03473 MOSC domain DGN16_09990 PF05173 Dihydrodipicolinate reductase, C-terminus DGN16_09990 PF01113 Dihydrodipicolinate reductase, N-terminus DGN16_09995 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DGN16_09995 PF00117 Glutamine amidotransferase class-I DGN16_10005 PF02142 MGS-like domain DGN16_10005 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DGN16_10005 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DGN16_10010 PF03449 Transcription elongation factor, N-terminal DGN16_10010 PF01272 Transcription elongation factor, GreA/GreB, C-term DGN16_10020 PF01368 DHH family DGN16_10020 PF02272 DHHA1 domain DGN16_10020 PF17768 RecJ OB domain DGN16_10030 PF04397 LytTr DNA-binding domain DGN16_10030 PF00072 Response regulator receiver domain DGN16_10045 PF00072 Response regulator receiver domain DGN16_10050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_10050 PF00512 His Kinase A (phospho-acceptor) domain DGN16_10050 PF00072 Response regulator receiver domain DGN16_10050 PF01627 Hpt domain DGN16_10055 PF01627 Hpt domain DGN16_10055 PF00072 Response regulator receiver domain DGN16_10055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_10055 PF00512 His Kinase A (phospho-acceptor) domain DGN16_10060 PF00378 Enoyl-CoA hydratase/isomerase DGN16_10065 PF00501 AMP-binding enzyme DGN16_10065 PF13193 AMP-binding enzyme C-terminal domain DGN16_10075 PF00330 Aconitase family (aconitate hydratase) DGN16_10075 PF00694 Aconitase C-terminal domain DGN16_10090 PF00330 Aconitase family (aconitate hydratase) DGN16_10090 PF11791 Aconitate B N-terminal domain DGN16_10090 PF06434 Aconitate hydratase 2 N-terminus DGN16_10095 PF00561 alpha/beta hydrolase fold DGN16_10100 PF00563 EAL domain DGN16_10100 PF00990 Diguanylate cyclase, GGDEF domain DGN16_10100 PF03707 Bacterial signalling protein N terminal repeat DGN16_10105 PF01339 CheB methylesterase DGN16_10105 PF00072 Response regulator receiver domain DGN16_10110 PF03975 CheD chemotactic sensory transduction DGN16_10115 PF01739 CheR methyltransferase, SAM binding domain DGN16_10115 PF03705 CheR methyltransferase, all-alpha domain DGN16_10120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN16_10120 PF02203 Tar ligand binding domain homologue DGN16_10120 PF00672 HAMP domain DGN16_10135 PF01584 CheW-like domain DGN16_10140 PF07238 PilZ domain DGN16_10140 PF07317 Flagellar regulator YcgR DGN16_10165 PF02203 Tar ligand binding domain homologue DGN16_10165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN16_10165 PF00672 HAMP domain DGN16_10170 PF02203 Tar ligand binding domain homologue DGN16_10170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN16_10170 PF00672 HAMP domain DGN16_10175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN16_10175 PF02203 Tar ligand binding domain homologue DGN16_10175 PF00672 HAMP domain DGN16_10180 PF00672 HAMP domain DGN16_10180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN16_10180 PF02203 Tar ligand binding domain homologue DGN16_10190 PF02203 Tar ligand binding domain homologue DGN16_10190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN16_10190 PF00672 HAMP domain DGN16_10200 PF00672 HAMP domain DGN16_10200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN16_10200 PF02203 Tar ligand binding domain homologue DGN16_10205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN16_10205 PF00672 HAMP domain DGN16_10215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN16_10215 PF08269 Cache domain DGN16_10215 PF08269 Cache domain DGN16_10215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN16_10225 PF02203 Tar ligand binding domain homologue DGN16_10225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN16_10225 PF00672 HAMP domain DGN16_10230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_10230 PF01627 Hpt domain DGN16_10230 PF01584 CheW-like domain DGN16_10230 PF02895 Signal transducing histidine kinase, homodimeric domain DGN16_10230 PF09078 CheY binding DGN16_10235 PF00072 Response regulator receiver domain DGN16_10245 PF01584 CheW-like domain DGN16_10250 PF13614 AAA domain DGN16_10255 PF13677 Membrane MotB of proton-channel complex MotA/MotB DGN16_10255 PF00691 OmpA family DGN16_10260 PF01618 MotA/TolQ/ExbB proton channel family DGN16_10275 PF05598 Transposase domain (DUF772) DGN16_10275 PF01609 Transposase DDE domain DGN16_10305 PF01609 Transposase DDE domain DGN16_10305 PF05598 Transposase domain (DUF772) DGN16_10335 PF02895 Signal transducing histidine kinase, homodimeric domain DGN16_10335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_10335 PF01627 Hpt domain DGN16_10335 PF00072 Response regulator receiver domain DGN16_10335 PF01584 CheW-like domain DGN16_10340 PF04344 Chemotaxis phosphatase, CheZ DGN16_10345 PF00072 Response regulator receiver domain DGN16_10350 PF04539 Sigma-70 region 3 DGN16_10350 PF04542 Sigma-70 region 2 DGN16_10350 PF04545 Sigma-70, region 4 DGN16_10355 PF10609 NUBPL iron-transfer P-loop NTPase DGN16_10360 PF00448 SRP54-type protein, GTPase domain DGN16_10370 PF00771 FHIPEP family DGN16_10375 PF01312 FlhB HrpN YscU SpaS Family DGN16_10385 PF00990 Diguanylate cyclase, GGDEF domain DGN16_10400 PF01311 Bacterial export proteins, family 1 DGN16_10405 PF01313 Bacterial export proteins, family 3 DGN16_10415 PF00813 FliP family DGN16_10420 PF04347 Flagellar biosynthesis protein, FliO DGN16_10425 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DGN16_10430 PF02154 Flagellar motor switch protein FliM DGN16_10430 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DGN16_10450 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DGN16_10450 PF18269 T3SS EscN ATPase C-terminal domain DGN16_10460 PF01706 FliG C-terminal domain DGN16_10460 PF14841 FliG middle domain DGN16_10460 PF14842 FliG N-terminal domain DGN16_10465 PF08345 Flagellar M-ring protein C-terminal DGN16_10465 PF01514 Secretory protein of YscJ/FliF family DGN16_10470 PF02049 Flagellar hook-basal body complex protein FliE DGN16_10475 PF00535 Glycosyl transferase family 2 DGN16_10475 PF00534 Glycosyl transferases group 1 DGN16_10485 PF01609 Transposase DDE domain DGN16_10485 PF05598 Transposase domain (DUF772) DGN16_10525 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DGN16_10525 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DGN16_10535 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DGN16_10540 PF00158 Sigma-54 interaction domain DGN16_10540 PF06490 Flagellar regulatory protein FleQ DGN16_10540 PF02954 Bacterial regulatory protein, Fis family DGN16_10545 PF00072 Response regulator receiver domain DGN16_10545 PF01339 CheB methylesterase DGN16_10550 PF00309 Sigma-54 factor, Activator interacting domain (AID) DGN16_10550 PF04963 Sigma-54 factor, core binding domain DGN16_10550 PF04552 Sigma-54, DNA binding domain DGN16_10555 PF00196 Bacterial regulatory proteins, luxR family DGN16_10555 PF00072 Response regulator receiver domain DGN16_10570 PF02561 Flagellar protein FliS DGN16_10575 PF07195 Flagellar hook-associated protein 2 C-terminus DGN16_10575 PF07196 Flagellin hook IN motif DGN16_10575 PF02465 Flagellar hook-associated protein 2 N-terminus DGN16_10580 PF00700 Bacterial flagellin C-terminal helical region DGN16_10580 PF00669 Bacterial flagellin N-terminal helical region DGN16_10590 PF05598 Transposase domain (DUF772) DGN16_10590 PF01609 Transposase DDE domain DGN16_10595 PF00700 Bacterial flagellin C-terminal helical region DGN16_10595 PF00669 Bacterial flagellin N-terminal helical region DGN16_10600 PF07196 Flagellin hook IN motif DGN16_10600 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DGN16_10605 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DGN16_10605 PF10135 Rod binding protein DGN16_10610 PF02119 Flagellar P-ring protein DGN16_10615 PF02107 Flagellar L-ring protein DGN16_10620 PF00460 Flagella basal body rod protein DGN16_10620 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DGN16_10625 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DGN16_10625 PF00460 Flagella basal body rod protein DGN16_10630 PF07559 Flagellar basal body protein FlaE DGN16_10630 PF00460 Flagella basal body rod protein DGN16_10630 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DGN16_10635 PF03963 Flagellar hook capping protein - N-terminal region DGN16_10640 PF00460 Flagella basal body rod protein DGN16_10640 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DGN16_10650 PF01584 CheW-like domain DGN16_10650 PF00072 Response regulator receiver domain DGN16_10670 PF13426 PAS domain DGN16_10670 PF00989 PAS fold DGN16_10670 PF00512 His Kinase A (phospho-acceptor) domain DGN16_10670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_10670 PF13188 PAS domain DGN16_10675 PF00563 EAL domain DGN16_10675 PF00990 Diguanylate cyclase, GGDEF domain DGN16_10675 PF03707 Bacterial signalling protein N terminal repeat DGN16_10680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_10680 PF07730 Histidine kinase DGN16_10685 PF00990 Diguanylate cyclase, GGDEF domain DGN16_10685 PF00563 EAL domain DGN16_10685 PF03707 Bacterial signalling protein N terminal repeat DGN16_10695 PF12729 Four helix bundle sensory module for signal transduction DGN16_10695 PF00672 HAMP domain DGN16_10695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN16_10700 PF04356 Protein of unknown function (DUF489) DGN16_10710 PF00293 NUDIX domain DGN16_10715 PF02617 ATP-dependent Clp protease adaptor protein ClpS DGN16_10720 PF00004 ATPase family associated with various cellular activities (AAA) DGN16_10720 PF07724 AAA domain (Cdc48 subfamily) DGN16_10720 PF02861 Clp amino terminal domain, pathogenicity island component DGN16_10720 PF17871 AAA lid domain DGN16_10720 PF10431 C-terminal, D2-small domain, of ClpB protein DGN16_10725 PF01176 Translation initiation factor 1A / IF-1 DGN16_10730 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DGN16_10740 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGN16_10745 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DGN16_10745 PF17854 FtsK alpha domain DGN16_10745 PF09397 Ftsk gamma domain DGN16_10745 PF01580 FtsK/SpoIIIE family DGN16_10755 PF03548 Outer membrane lipoprotein carrier protein LolA DGN16_10765 PF12002 MgsA AAA+ ATPase C terminal DGN16_10765 PF00004 ATPase family associated with various cellular activities (AAA) DGN16_10765 PF16193 AAA C-terminal domain DGN16_10770 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DGN16_10780 PF02803 Thiolase, C-terminal domain DGN16_10780 PF00108 Thiolase, N-terminal domain DGN16_10785 PF00378 Enoyl-CoA hydratase/isomerase DGN16_10785 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DGN16_10785 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DGN16_10795 PF00334 Nucleoside diphosphate kinase DGN16_10800 PF04055 Radical SAM superfamily DGN16_10810 PF13464 Domain of unknown function (DUF4115) DGN16_10820 PF13360 PQQ-like domain DGN16_10820 PF01011 PQQ enzyme repeat DGN16_10825 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DGN16_10825 PF01926 50S ribosome-binding GTPase DGN16_10830 PF03453 MoeA N-terminal region (domain I and II) DGN16_10830 PF03454 MoeA C-terminal region (domain IV) DGN16_10830 PF00994 Probable molybdopterin binding domain DGN16_10835 PF00899 ThiF family DGN16_10860 PF08240 Alcohol dehydrogenase GroES-like domain DGN16_10860 PF13823 Alcohol dehydrogenase GroES-associated DGN16_10860 PF00107 Zinc-binding dehydrogenase DGN16_10870 PF03372 Endonuclease/Exonuclease/phosphatase family DGN16_10880 PF00994 Probable molybdopterin binding domain DGN16_10880 PF03454 MoeA C-terminal region (domain IV) DGN16_10880 PF03453 MoeA N-terminal region (domain I and II) DGN16_10885 PF12804 MobA-like NTP transferase domain DGN16_10910 PF00561 alpha/beta hydrolase fold DGN16_10915 PF01566 Natural resistance-associated macrophage protein DGN16_10920 PF02742 Iron dependent repressor, metal binding and dimerisation domain DGN16_10920 PF01325 Iron dependent repressor, N-terminal DNA binding domain DGN16_10925 PF14437 MafB19-like deaminase DGN16_10930 PF00929 Exonuclease DGN16_10935 PF00924 Mechanosensitive ion channel DGN16_10935 PF05552 Conserved TM helix DGN16_10940 PF00391 PEP-utilising enzyme, mobile domain DGN16_10940 PF02896 PEP-utilising enzyme, TIM barrel domain DGN16_10940 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DGN16_10945 PF03618 Kinase/pyrophosphorylase DGN16_10965 PF01066 CDP-alcohol phosphatidyltransferase DGN16_10975 PF00561 alpha/beta hydrolase fold DGN16_10990 PF00355 Rieske [2Fe-2S] domain DGN16_10990 PF01266 FAD dependent oxidoreductase DGN16_11000 PF16921 Tex protein YqgF-like domain DGN16_11000 PF00575 S1 RNA binding domain DGN16_11000 PF09371 Tex-like protein N-terminal domain DGN16_11000 PF17674 HHH domain DGN16_11005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_11005 PF09308 LuxQ, periplasmic DGN16_11005 PF00072 Response regulator receiver domain DGN16_11005 PF00512 His Kinase A (phospho-acceptor) domain DGN16_11045 PF00034 Cytochrome c DGN16_11055 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGN16_11060 PF00873 AcrB/AcrD/AcrF family DGN16_11065 PF00873 AcrB/AcrD/AcrF family DGN16_11075 PF01081 KDPG and KHG aldolase DGN16_11080 PF00920 Dehydratase family DGN16_11085 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DGN16_11090 PF02685 Glucokinase DGN16_11095 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DGN16_11095 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DGN16_11100 PF17912 MalK OB fold domain DGN16_11100 PF00005 ABC transporter DGN16_11105 PF01571 Aminomethyltransferase folate-binding domain DGN16_11115 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DGN16_11120 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DGN16_11125 PF02910 Fumarate reductase flavoprotein C-term DGN16_11125 PF00890 FAD binding domain DGN16_11135 PF13085 2Fe-2S iron-sulfur cluster binding domain DGN16_11140 PF03937 Flavinator of succinate dehydrogenase DGN16_11150 PF02687 FtsX-like permease family DGN16_11150 PF12704 MacB-like periplasmic core domain DGN16_11155 PF00005 ABC transporter DGN16_11165 PF00753 Metallo-beta-lactamase superfamily DGN16_11165 PF03772 Competence protein DGN16_11170 PF01618 MotA/TolQ/ExbB proton channel family DGN16_11175 PF02472 Biopolymer transport protein ExbD/TolR DGN16_11180 PF00664 ABC transporter transmembrane region DGN16_11180 PF00005 ABC transporter DGN16_11185 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DGN16_11190 PF02348 Cytidylyltransferase DGN16_11195 PF01451 Low molecular weight phosphotyrosine protein phosphatase DGN16_11205 PF08459 UvrC Helix-hairpin-helix N-terminal DGN16_11205 PF02151 UvrB/uvrC motif DGN16_11205 PF01541 GIY-YIG catalytic domain DGN16_11210 PF01066 CDP-alcohol phosphatidyltransferase DGN16_11240 PF13356 Arm DNA-binding domain DGN16_11240 PF00589 Phage integrase family DGN16_11250 PF00872 Transposase, Mutator family DGN16_11270 PF00872 Transposase, Mutator family DGN16_11280 PF00128 Alpha amylase, catalytic domain DGN16_11290 PF01609 Transposase DDE domain DGN16_11290 PF05598 Transposase domain (DUF772) DGN16_11325 PF01609 Transposase DDE domain DGN16_11325 PF05598 Transposase domain (DUF772) DGN16_11360 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DGN16_11365 PF00128 Alpha amylase, catalytic domain DGN16_11365 PF00686 Starch binding domain DGN16_11370 PF00356 Bacterial regulatory proteins, lacI family DGN16_11375 PF03129 Anticodon binding domain DGN16_11375 PF02824 TGS domain DGN16_11375 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DGN16_11375 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DGN16_11380 PF00707 Translation initiation factor IF-3, C-terminal domain DGN16_11380 PF05198 Translation initiation factor IF-3, N-terminal domain DGN16_11385 PF01632 Ribosomal protein L35 DGN16_11390 PF00453 Ribosomal protein L20 DGN16_11395 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DGN16_11395 PF01409 tRNA synthetases class II core domain (F) DGN16_11400 PF01588 Putative tRNA binding domain DGN16_11400 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DGN16_11400 PF03147 Ferredoxin-fold anticodon binding domain DGN16_11400 PF03484 tRNA synthetase B5 domain DGN16_11400 PF03483 B3/4 domain DGN16_11405 PF00216 Bacterial DNA-binding protein DGN16_11410 PF13411 MerR HTH family regulatory protein DGN16_11430 PF02397 Bacterial sugar transferase DGN16_11450 PF00534 Glycosyl transferases group 1 DGN16_11450 PF13439 Glycosyltransferase Family 4 DGN16_11460 PF14667 Polysaccharide biosynthesis C-terminal domain DGN16_11475 PF03808 Glycosyl transferase WecB/TagA/CpsF family DGN16_11490 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DGN16_11490 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DGN16_11495 PF16123 Hydroxyacylglutathione hydrolase C-terminus DGN16_11495 PF00753 Metallo-beta-lactamase superfamily DGN16_11500 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family DGN16_11520 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DGN16_11520 PF02779 Transketolase, pyrimidine binding domain DGN16_11520 PF02780 Transketolase, C-terminal domain DGN16_11530 PF02770 Acyl-CoA dehydrogenase, middle domain DGN16_11530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DGN16_11530 PF12806 Acetyl-CoA dehydrogenase C-terminal like DGN16_11530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DGN16_11540 PF08212 Lipocalin-like domain DGN16_11550 PF00589 Phage integrase family DGN16_11560 PF05598 Transposase domain (DUF772) DGN16_11560 PF01609 Transposase DDE domain DGN16_11570 PF05598 Transposase domain (DUF772) DGN16_11570 PF01609 Transposase DDE domain DGN16_11585 PF05598 Transposase domain (DUF772) DGN16_11585 PF01609 Transposase DDE domain DGN16_11620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_11620 PF13426 PAS domain DGN16_11620 PF00072 Response regulator receiver domain DGN16_11625 PF04362 Bacterial Fe(2+) trafficking DGN16_11630 PF00730 HhH-GPD superfamily base excision DNA repair protein DGN16_11630 PF10576 Iron-sulfur binding domain of endonuclease III DGN16_11630 PF00633 Helix-hairpin-helix motif DGN16_11630 PF14815 NUDIX domain DGN16_11640 PF02881 SRP54-type protein, helical bundle domain DGN16_11640 PF00448 SRP54-type protein, GTPase domain DGN16_11650 PF05544 Proline racemase DGN16_11655 PF01266 FAD dependent oxidoreductase DGN16_11665 PF04324 BFD-like [2Fe-2S] binding domain DGN16_11665 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGN16_11670 PF00701 Dihydrodipicolinate synthetase family DGN16_11675 PF00171 Aldehyde dehydrogenase family DGN16_11680 PF01321 Creatinase/Prolidase N-terminal domain DGN16_11680 PF00557 Metallopeptidase family M24 DGN16_11695 PF13520 Amino acid permease DGN16_11725 PF00082 Subtilase family DGN16_11725 PF09286 Pro-kumamolisin, activation domain DGN16_11735 PF00593 TonB dependent receptor DGN16_11735 PF07715 TonB-dependent Receptor Plug Domain DGN16_11745 PF07532 Bacterial Ig-like domain (group 4) DGN16_11750 PF04616 Glycosyl hydrolases family 43 DGN16_11785 PF05598 Transposase domain (DUF772) DGN16_11785 PF01609 Transposase DDE domain DGN16_11795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_11795 PF00183 Hsp90 protein DGN16_11805 PF01467 Cytidylyltransferase-like DGN16_11820 PF00037 4Fe-4S binding domain DGN16_11830 PF02927 Cellulase N-terminal ig-like domain DGN16_11830 PF00759 Glycosyl hydrolase family 9 DGN16_11880 PF01702 Queuine tRNA-ribosyltransferase DGN16_11885 PF02699 Preprotein translocase subunit DGN16_11890 PF13721 SecD export protein N-terminal TM region DGN16_11890 PF02355 Protein export membrane protein DGN16_11890 PF07549 SecD/SecF GG Motif DGN16_11895 PF07549 SecD/SecF GG Motif DGN16_11895 PF02355 Protein export membrane protein DGN16_11965 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DGN16_11970 PF00294 pfkB family carbohydrate kinase DGN16_11975 PF05524 PEP-utilising enzyme, N-terminal DGN16_11975 PF00381 PTS HPr component phosphorylation site DGN16_11975 PF02896 PEP-utilising enzyme, TIM barrel domain DGN16_11975 PF00391 PEP-utilising enzyme, mobile domain DGN16_11975 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DGN16_11980 PF00356 Bacterial regulatory proteins, lacI family DGN16_11985 PF00873 AcrB/AcrD/AcrF family DGN16_11990 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGN16_11990 PF00529 HlyD membrane-fusion protein of T1SS DGN16_12000 PF05088 Bacterial NAD-glutamate dehydrogenase DGN16_12010 PF14765 Polyketide synthase dehydratase DGN16_12010 PF08240 Alcohol dehydrogenase GroES-like domain DGN16_12010 PF16197 Ketoacyl-synthetase C-terminal extension DGN16_12010 PF00109 Beta-ketoacyl synthase, N-terminal domain DGN16_12010 PF00550 Phosphopantetheine attachment site DGN16_12010 PF02801 Beta-ketoacyl synthase, C-terminal domain DGN16_12010 PF08659 KR domain DGN16_12010 PF00698 Acyl transferase domain DGN16_12015 PF00106 short chain dehydrogenase DGN16_12020 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DGN16_12025 PF00440 Bacterial regulatory proteins, tetR family DGN16_12030 PF00106 short chain dehydrogenase DGN16_12055 PF07690 Major Facilitator Superfamily DGN16_12065 PF00072 Response regulator receiver domain DGN16_12070 PF00072 Response regulator receiver domain DGN16_12070 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DGN16_12070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_12070 PF00512 His Kinase A (phospho-acceptor) domain DGN16_12070 PF00672 HAMP domain DGN16_12070 PF01627 Hpt domain DGN16_12075 PF04286 Protein of unknown function (DUF445) DGN16_12085 PF00202 Aminotransferase class-III DGN16_12100 PF07690 Major Facilitator Superfamily DGN16_12105 PF02634 FdhD/NarQ family DGN16_12110 PF00384 Molybdopterin oxidoreductase DGN16_12125 PF07690 Major Facilitator Superfamily DGN16_12125 PF00083 Sugar (and other) transporter DGN16_12130 PF01814 Hemerythrin HHE cation binding domain DGN16_12135 PF00072 Response regulator receiver domain DGN16_12135 PF00990 Diguanylate cyclase, GGDEF domain DGN16_12140 PF01266 FAD dependent oxidoreductase DGN16_12145 PF00120 Glutamine synthetase, catalytic domain DGN16_12150 PF07722 Peptidase C26 DGN16_12155 PF00120 Glutamine synthetase, catalytic domain DGN16_12160 PF00202 Aminotransferase class-III DGN16_12165 PF13416 Bacterial extracellular solute-binding protein DGN16_12170 PF13533 Biotin-lipoyl like DGN16_12175 PF07690 Major Facilitator Superfamily DGN16_12180 PF02321 Outer membrane efflux protein DGN16_12195 PF00528 Binding-protein-dependent transport system inner membrane component DGN16_12200 PF00528 Binding-protein-dependent transport system inner membrane component DGN16_12205 PF00171 Aldehyde dehydrogenase family DGN16_12220 PF00571 CBS domain DGN16_12220 PF03471 Transporter associated domain DGN16_12230 PF02130 Uncharacterized protein family UPF0054 DGN16_12240 PF02562 PhoH-like protein DGN16_12245 PF01938 TRAM domain DGN16_12245 PF04055 Radical SAM superfamily DGN16_12245 PF00919 Uncharacterized protein family UPF0004 DGN16_12260 PF01464 Transglycosylase SLT domain DGN16_12270 PF00355 Rieske [2Fe-2S] domain DGN16_12270 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal DGN16_12275 PF00032 Cytochrome b(C-terminal)/b6/petD DGN16_12275 PF00033 Cytochrome b/b6/petB DGN16_12280 PF02167 Cytochrome C1 family DGN16_12285 PF00043 Glutathione S-transferase, C-terminal domain DGN16_12285 PF02798 Glutathione S-transferase, N-terminal domain DGN16_12290 PF04386 Stringent starvation protein B DGN16_12310 PF00271 Helicase conserved C-terminal domain DGN16_12310 PF08494 DEAD/H associated DGN16_12310 PF00270 DEAD/DEAH box helicase DGN16_12315 PF02245 Methylpurine-DNA glycosylase (MPG) DGN16_12320 PF02743 Cache domain DGN16_12320 PF00672 HAMP domain DGN16_12320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN16_12325 PF01584 CheW-like domain DGN16_12350 PF13298 DNA polymerase Ligase (LigD) DGN16_12350 PF04679 ATP dependent DNA ligase C terminal region DGN16_12350 PF01068 ATP dependent DNA ligase domain DGN16_12355 PF01612 3'-5' exonuclease DGN16_12355 PF00570 HRDC domain DGN16_12370 PF03781 Sulfatase-modifying factor enzyme 1 DGN16_12385 PF13742 OB-fold nucleic acid binding domain DGN16_12385 PF02601 Exonuclease VII, large subunit DGN16_12390 PF08331 Domain of unknown function (DUF1730) DGN16_12395 PF01256 Carbohydrate kinase DGN16_12395 PF03853 YjeF-related protein N-terminus DGN16_12400 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DGN16_12405 PF11741 AMIN domain DGN16_12405 PF01520 N-acetylmuramoyl-L-alanine amidase DGN16_12410 PF08676 MutL C terminal dimerisation domain DGN16_12410 PF01119 DNA mismatch repair protein, C-terminal domain DGN16_12430 PF05233 PHB accumulation regulatory domain DGN16_12430 PF07879 PHB/PHA accumulation regulator DNA-binding domain DGN16_12435 PF00106 short chain dehydrogenase DGN16_12440 PF00749 tRNA synthetases class I (E and Q), catalytic domain DGN16_12445 PF01435 Peptidase family M48 DGN16_12450 PF01609 Transposase DDE domain DGN16_12450 PF05598 Transposase domain (DUF772) DGN16_12455 PF00072 Response regulator receiver domain DGN16_12455 PF00990 Diguanylate cyclase, GGDEF domain DGN16_12455 PF00563 EAL domain DGN16_12465 PF07152 YaeQ protein DGN16_12470 PF00313 'Cold-shock' DNA-binding domain DGN16_12475 PF14497 Glutathione S-transferase, C-terminal domain DGN16_12475 PF02798 Glutathione S-transferase, N-terminal domain DGN16_12480 PF07859 alpha/beta hydrolase fold DGN16_12485 PF02696 Uncharacterized ACR, YdiU/UPF0061 family DGN16_12490 PF00156 Phosphoribosyl transferase domain DGN16_12495 PF03880 DbpA RNA binding domain DGN16_12495 PF00271 Helicase conserved C-terminal domain DGN16_12495 PF00270 DEAD/DEAH box helicase DGN16_12500 PF16326 ABC transporter C-terminal domain DGN16_12500 PF00005 ABC transporter DGN16_12500 PF12848 ABC transporter DGN16_12515 PF00545 ribonuclease DGN16_12520 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DGN16_12520 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DGN16_12525 PF00459 Inositol monophosphatase family DGN16_12530 PF00588 SpoU rRNA Methylase family DGN16_12540 PF00990 Diguanylate cyclase, GGDEF domain DGN16_12540 PF03707 Bacterial signalling protein N terminal repeat DGN16_12540 PF13188 PAS domain DGN16_12540 PF00563 EAL domain DGN16_12545 PF04055 Radical SAM superfamily DGN16_12550 PF01132 Elongation factor P (EF-P) OB domain DGN16_12550 PF08207 Elongation factor P (EF-P) KOW-like domain DGN16_12550 PF09285 Elongation factor P, C-terminal DGN16_12560 PF01979 Amidohydrolase family DGN16_12570 PF13419 Haloacid dehalogenase-like hydrolase DGN16_12595 PF00295 Glycosyl hydrolases family 28 DGN16_12620 PF00753 Metallo-beta-lactamase superfamily DGN16_12630 PF05985 Ethanolamine ammonia-lyase light chain (EutC) DGN16_12635 PF06751 Ethanolamine ammonia lyase large subunit (EutB) DGN16_12645 PF01551 Peptidase family M23 DGN16_12645 PF08460 Bacterial SH3 domain DGN16_12650 PF01979 Amidohydrolase family DGN16_12655 PF01809 Putative membrane protein insertion efficiency factor DGN16_12660 PF01258 Prokaryotic dksA/traR C4-type zinc finger DGN16_12670 PF02657 Fe-S metabolism associated domain DGN16_12675 PF09190 DALR domain DGN16_12675 PF01406 tRNA synthetases class I (C) catalytic domain DGN16_12685 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DGN16_12685 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DGN16_12690 PF00764 Arginosuccinate synthase DGN16_12700 PF07687 Peptidase dimerisation domain DGN16_12700 PF01546 Peptidase family M20/M25/M40 DGN16_12705 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase DGN16_12705 PF00696 Amino acid kinase family DGN16_12715 PF01118 Semialdehyde dehydrogenase, NAD binding domain DGN16_12720 PF00206 Lyase DGN16_12730 PF01472 PUA domain DGN16_12730 PF00696 Amino acid kinase family DGN16_12735 PF00171 Aldehyde dehydrogenase family DGN16_12745 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DGN16_12745 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DGN16_12755 PF00589 Phage integrase family DGN16_12770 PF01551 Peptidase family M23 DGN16_12805 PF00872 Transposase, Mutator family DGN16_12825 PF02322 Cytochrome bd terminal oxidase subunit II DGN16_12830 PF01654 Cytochrome bd terminal oxidase subunit I DGN16_12835 PF00664 ABC transporter transmembrane region DGN16_12835 PF00005 ABC transporter DGN16_12840 PF00664 ABC transporter transmembrane region DGN16_12840 PF00005 ABC transporter DGN16_12845 PF00313 'Cold-shock' DNA-binding domain DGN16_12850 PF00561 alpha/beta hydrolase fold DGN16_12860 PF03918 Cytochrome C biogenesis protein DGN16_12865 PF08534 Redoxin DGN16_12870 PF01578 Cytochrome C assembly protein DGN16_12870 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DGN16_12875 PF03100 CcmE DGN16_12885 PF01578 Cytochrome C assembly protein DGN16_12890 PF03379 CcmB protein DGN16_12895 PF00005 ABC transporter DGN16_12900 PF00155 Aminotransferase class I and II DGN16_12905 PF00795 Carbon-nitrogen hydrolase DGN16_12925 PF00849 RNA pseudouridylate synthase DGN16_12925 PF01479 S4 domain DGN16_12930 PF04079 Segregation and condensation complex subunit ScpB DGN16_12935 PF02616 Segregation and condensation protein ScpA DGN16_12940 PF03795 YCII-related domain DGN16_12950 PF00356 Bacterial regulatory proteins, lacI family DGN16_12970 PF00528 Binding-protein-dependent transport system inner membrane component DGN16_12975 PF00528 Binding-protein-dependent transport system inner membrane component DGN16_13000 PF00795 Carbon-nitrogen hydrolase DGN16_13005 PF04371 Porphyromonas-type peptidyl-arginine deiminase DGN16_13020 PF00444 Ribosomal protein L36 DGN16_13025 PF02224 Cytidylate kinase DGN16_13030 PF00575 S1 RNA binding domain DGN16_13035 PF00216 Bacterial DNA-binding protein DGN16_13045 PF18073 Rubredoxin metal binding domain DGN16_13050 PF00953 Glycosyl transferase family 4 DGN16_13055 PF02719 Polysaccharide biosynthesis protein DGN16_13060 PF00483 Nucleotidyl transferase DGN16_13070 PF02254 TrkA-N domain DGN16_13070 PF00999 Sodium/hydrogen exchanger family DGN16_13085 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DGN16_13085 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DGN16_13090 PF00478 IMP dehydrogenase / GMP reductase domain DGN16_13090 PF00571 CBS domain DGN16_13095 PF00117 Glutamine amidotransferase class-I DGN16_13095 PF00958 GMP synthase C terminal domain DGN16_13095 PF02540 NAD synthase DGN16_13105 PF00872 Transposase, Mutator family DGN16_13115 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus DGN16_13115 PF00361 Proton-conducting membrane transporter DGN16_13115 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DGN16_13135 PF00196 Bacterial regulatory proteins, luxR family DGN16_13135 PF00072 Response regulator receiver domain DGN16_13145 PF12833 Helix-turn-helix domain DGN16_13150 PF00857 Isochorismatase family DGN16_13160 PF07969 Amidohydrolase family DGN16_13180 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DGN16_13180 PF10414 Sirohaem synthase dimerisation region DGN16_13180 PF14824 Sirohaem biosynthesis protein central DGN16_13200 PF05974 Domain of unknown function (DUF892) DGN16_13220 PF00990 Diguanylate cyclase, GGDEF domain DGN16_13220 PF08447 PAS fold DGN16_13220 PF00563 EAL domain DGN16_13220 PF08448 PAS fold DGN16_13225 PF12951 Passenger-associated-transport-repeat DGN16_13230 PF00072 Response regulator receiver domain DGN16_13230 PF00196 Bacterial regulatory proteins, luxR family DGN16_13235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_13235 PF00512 His Kinase A (phospho-acceptor) domain DGN16_13235 PF08448 PAS fold DGN16_13235 PF13426 PAS domain DGN16_13235 PF00072 Response regulator receiver domain DGN16_13250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGN16_13260 PF00082 Subtilase family DGN16_13260 PF03797 Autotransporter beta-domain DGN16_13270 PF07694 5TMR of 5TMR-LYT DGN16_13270 PF13492 GAF domain DGN16_13270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_13270 PF06580 Histidine kinase DGN16_13275 PF00072 Response regulator receiver domain DGN16_13275 PF04397 LytTr DNA-binding domain DGN16_13280 PF00144 Beta-lactamase DGN16_13290 PF07995 Glucose / Sorbosone dehydrogenase DGN16_13295 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DGN16_13310 PF01494 FAD binding domain DGN16_13315 PF00989 PAS fold DGN16_13315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_13315 PF00512 His Kinase A (phospho-acceptor) domain DGN16_13325 PF13581 Histidine kinase-like ATPase domain DGN16_13325 PF07536 HWE histidine kinase DGN16_13325 PF13426 PAS domain DGN16_13355 PF05114 Protein of unknown function (DUF692) DGN16_13380 PF00881 Nitroreductase family DGN16_13385 PF01965 DJ-1/PfpI family DGN16_13390 PF00107 Zinc-binding dehydrogenase DGN16_13390 PF08240 Alcohol dehydrogenase GroES-like domain DGN16_13395 PF03466 LysR substrate binding domain DGN16_13395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN16_13405 PF05598 Transposase domain (DUF772) DGN16_13405 PF01609 Transposase DDE domain DGN16_13430 PF00501 AMP-binding enzyme DGN16_13430 PF13193 AMP-binding enzyme C-terminal domain DGN16_13430 PF00668 Condensation domain DGN16_13430 PF00550 Phosphopantetheine attachment site DGN16_13430 PF00975 Thioesterase domain DGN16_13435 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DGN16_13435 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DGN16_13445 PF00550 Phosphopantetheine attachment site DGN16_13445 PF08242 Methyltransferase domain DGN16_13445 PF08659 KR domain DGN16_13445 PF00109 Beta-ketoacyl synthase, N-terminal domain DGN16_13445 PF00109 Beta-ketoacyl synthase, N-terminal domain DGN16_13445 PF16197 Ketoacyl-synthetase C-terminal extension DGN16_13445 PF14765 Polyketide synthase dehydratase DGN16_13445 PF02801 Beta-ketoacyl synthase, C-terminal domain DGN16_13445 PF16197 Ketoacyl-synthetase C-terminal extension DGN16_13445 PF08242 Methyltransferase domain DGN16_13445 PF02801 Beta-ketoacyl synthase, C-terminal domain DGN16_13445 PF08659 KR domain DGN16_13445 PF00550 Phosphopantetheine attachment site DGN16_13445 PF14765 Polyketide synthase dehydratase DGN16_13450 PF16197 Ketoacyl-synthetase C-terminal extension DGN16_13450 PF00109 Beta-ketoacyl synthase, N-terminal domain DGN16_13450 PF02801 Beta-ketoacyl synthase, C-terminal domain DGN16_13450 PF08659 KR domain DGN16_13450 PF08242 Methyltransferase domain DGN16_13450 PF00550 Phosphopantetheine attachment site DGN16_13450 PF14765 Polyketide synthase dehydratase DGN16_13455 PF16197 Ketoacyl-synthetase C-terminal extension DGN16_13455 PF14765 Polyketide synthase dehydratase DGN16_13455 PF00550 Phosphopantetheine attachment site DGN16_13455 PF08659 KR domain DGN16_13455 PF02801 Beta-ketoacyl synthase, C-terminal domain DGN16_13455 PF13193 AMP-binding enzyme C-terminal domain DGN16_13455 PF00668 Condensation domain DGN16_13455 PF00501 AMP-binding enzyme DGN16_13455 PF00109 Beta-ketoacyl synthase, N-terminal domain DGN16_13460 PF00109 Beta-ketoacyl synthase, N-terminal domain DGN16_13460 PF02801 Beta-ketoacyl synthase, C-terminal domain DGN16_13465 PF00005 ABC transporter DGN16_13475 PF03621 MbtH-like protein DGN16_13480 PF00975 Thioesterase domain DGN16_13520 PF17091 Inovirus G7P protein DGN16_13555 PF00106 short chain dehydrogenase DGN16_13560 PF05199 GMC oxidoreductase DGN16_13560 PF00732 GMC oxidoreductase DGN16_13565 PF08241 Methyltransferase domain DGN16_13565 PF12697 Alpha/beta hydrolase family DGN16_13615 PF01106 NifU-like domain DGN16_13620 PF01329 Pterin 4 alpha carbinolamine dehydratase DGN16_13630 PF02535 ZIP Zinc transporter DGN16_13635 PF11737 Protein of unknown function (DUF3300) DGN16_13640 PF00849 RNA pseudouridylate synthase DGN16_13640 PF01479 S4 domain DGN16_13645 PF12111 Polyribonucleotide phosphorylase C terminal DGN16_13645 PF10150 Ribonuclease E/G family DGN16_13645 PF00575 S1 RNA binding domain DGN16_13650 PF00196 Bacterial regulatory proteins, luxR family DGN16_13650 PF00072 Response regulator receiver domain DGN16_13655 PF00581 Rhodanese-like domain DGN16_13655 PF17773 UPF0176 acylphosphatase like domain DGN16_13665 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DGN16_13675 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DGN16_13675 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DGN16_13675 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DGN16_13750 PF03135 CagE, TrbE, VirB family, component of type IV transporter system DGN16_13755 PF05101 Type IV secretory pathway, VirB3-like protein DGN16_13765 PF01464 Transglycosylase SLT domain DGN16_13770 PF00437 Type II/IV secretion system protein DGN16_13775 PF03743 Bacterial conjugation TrbI-like protein DGN16_13795 PF02534 Type IV secretory system Conjugative DNA transfer DGN16_13810 PF00271 Helicase conserved C-terminal domain DGN16_13810 PF17757 UvrB interaction domain DGN16_13810 PF04851 Type III restriction enzyme, res subunit DGN16_13810 PF12344 Ultra-violet resistance protein B DGN16_13810 PF02151 UvrB/uvrC motif DGN16_13820 PF00872 Transposase, Mutator family DGN16_13850 PF05567 Neisseria PilC beta-propeller domain DGN16_13870 PF07963 Prokaryotic N-terminal methylation motif DGN16_13870 PF00114 Pilin (bacterial filament) DGN16_13880 PF11892 Domain of unknown function (DUF3412) DGN16_13880 PF03641 Possible lysine decarboxylase DGN16_13880 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases DGN16_13885 PF00593 TonB dependent receptor DGN16_13895 PF01914 MarC family integral membrane protein DGN16_13905 PF00462 Glutaredoxin DGN16_13910 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DGN16_13910 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DGN16_13915 PF02222 ATP-grasp domain DGN16_13915 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DGN16_13920 PF00731 AIR carboxylase DGN16_13930 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DGN16_13930 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DGN16_13940 PF00013 KH domain DGN16_13940 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DGN16_13940 PF01138 3' exoribonuclease family, domain 1 DGN16_13940 PF03725 3' exoribonuclease family, domain 2 DGN16_13940 PF00575 S1 RNA binding domain DGN16_13945 PF00312 Ribosomal protein S15 DGN16_13950 PF01509 TruB family pseudouridylate synthase (N terminal domain) DGN16_13950 PF09157 Pseudouridine synthase II TruB, C-terminal DGN16_13950 PF16198 tRNA pseudouridylate synthase B C-terminal domain DGN16_13955 PF02033 Ribosome-binding factor A DGN16_13960 PF00009 Elongation factor Tu GTP binding domain DGN16_13960 PF11987 Translation-initiation factor 2 DGN16_13960 PF08364 Bacterial translation initiation factor IF-2 associated region DGN16_13960 PF04760 Translation initiation factor IF-2, N-terminal region DGN16_13965 PF08529 NusA N-terminal domain DGN16_13965 PF00575 S1 RNA binding domain DGN16_13965 PF13184 NusA-like KH domain DGN16_13970 PF02576 RimP N-terminal domain DGN16_13970 PF17384 RimP C-terminal SH3 domain DGN16_13980 PF00361 Proton-conducting membrane transporter DGN16_13985 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus DGN16_13985 PF00361 Proton-conducting membrane transporter DGN16_13990 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DGN16_13990 PF00361 Proton-conducting membrane transporter DGN16_13995 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DGN16_14000 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DGN16_14005 PF12838 4Fe-4S dicluster domain DGN16_14010 PF00146 NADH dehydrogenase DGN16_14015 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal DGN16_14015 PF00384 Molybdopterin oxidoreductase DGN16_14015 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DGN16_14020 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DGN16_14020 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DGN16_14020 PF10531 SLBB domain DGN16_14030 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DGN16_14035 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DGN16_14040 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DGN16_14045 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DGN16_14060 PF00121 Triosephosphate isomerase DGN16_14065 PF00106 short chain dehydrogenase DGN16_14080 PF03707 Bacterial signalling protein N terminal repeat DGN16_14080 PF00990 Diguanylate cyclase, GGDEF domain DGN16_14080 PF00563 EAL domain DGN16_14095 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DGN16_14095 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DGN16_14095 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DGN16_14095 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DGN16_14100 PF17848 Acetyl-coA carboxylase zinc finger domain DGN16_14100 PF01039 Carboxyl transferase domain DGN16_14105 PF00290 Tryptophan synthase alpha chain DGN16_14115 PF00291 Pyridoxal-phosphate dependent enzyme DGN16_14120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN16_14120 PF03466 LysR substrate binding domain DGN16_14125 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DGN16_14130 PF01416 tRNA pseudouridine synthase DGN16_14145 PF02774 Semialdehyde dehydrogenase, dimerisation domain DGN16_14145 PF01118 Semialdehyde dehydrogenase, NAD binding domain DGN16_14150 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DGN16_14150 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DGN16_14155 PF01264 Chorismate synthase DGN16_14160 PF05175 Methyltransferase small domain DGN16_14165 PF02630 SCO1/SenC DGN16_14170 PF02666 Phosphatidylserine decarboxylase DGN16_14185 PF05872 Bacterial protein of unknown function (DUF853) DGN16_14190 PF00293 NUDIX domain DGN16_14205 PF03449 Transcription elongation factor, N-terminal DGN16_14205 PF01272 Transcription elongation factor, GreA/GreB, C-term DGN16_14210 PF00919 Uncharacterized protein family UPF0004 DGN16_14210 PF04055 Radical SAM superfamily DGN16_14210 PF18693 TRAM domain DGN16_14220 PF00872 Transposase, Mutator family DGN16_14230 PF03852 DNA mismatch endonuclease Vsr DGN16_14235 PF00145 C-5 cytosine-specific DNA methylase DGN16_14255 PF01738 Dienelactone hydrolase family DGN16_14275 PF00692 dUTPase DGN16_14285 PF10609 NUBPL iron-transfer P-loop NTPase DGN16_14290 PF07715 TonB-dependent Receptor Plug Domain DGN16_14290 PF00593 TonB dependent receptor DGN16_14320 PF05649 Peptidase family M13 DGN16_14320 PF01431 Peptidase family M13 DGN16_14325 PF05649 Peptidase family M13 DGN16_14325 PF01431 Peptidase family M13 DGN16_14345 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGN16_14345 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DGN16_14350 PF01266 FAD dependent oxidoreductase DGN16_14355 PF04235 Protein of unknown function (DUF418) DGN16_14360 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DGN16_14365 PF00877 NlpC/P60 family DGN16_14370 PF00877 NlpC/P60 family DGN16_14385 PF00375 Sodium:dicarboxylate symporter family DGN16_14390 PF00245 Alkaline phosphatase DGN16_14400 PF01171 PP-loop family DGN16_14400 PF09179 TilS substrate binding domain DGN16_14400 PF11734 TilS substrate C-terminal domain DGN16_14405 PF02609 Exonuclease VII small subunit DGN16_14410 PF00348 Polyprenyl synthetase DGN16_14415 PF14521 Lysine-specific metallo-endopeptidase DGN16_14425 PF01523 Putative modulator of DNA gyrase DGN16_14430 PF04751 Protein of unknown function (DUF615) DGN16_14435 PF01523 Putative modulator of DNA gyrase DGN16_14445 PF13116 Protein of unknown function DGN16_14445 PF13502 AsmA-like C-terminal region DGN16_14450 PF00575 S1 RNA binding domain DGN16_14450 PF10150 Ribonuclease E/G family DGN16_14455 PF02545 Maf-like protein DGN16_14460 PF04402 Protein of unknown function (DUF541) DGN16_14475 PF02590 Predicted SPOUT methyltransferase DGN16_14490 PF01467 Cytidylyltransferase-like DGN16_14505 PF08264 Anticodon-binding domain of tRNA DGN16_14505 PF00133 tRNA synthetases class I (I, L, M and V) DGN16_14505 PF13603 Leucyl-tRNA synthetase, Domain 2 DGN16_14515 PF00085 Thioredoxin DGN16_14555 PF04070 Domain of unknown function (DUF378) DGN16_14560 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DGN16_14570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN16_14570 PF03466 LysR substrate binding domain DGN16_14600 PF00664 ABC transporter transmembrane region DGN16_14600 PF00005 ABC transporter DGN16_14610 PF00873 AcrB/AcrD/AcrF family DGN16_14625 PF02321 Outer membrane efflux protein DGN16_14630 PF00072 Response regulator receiver domain DGN16_14630 PF00486 Transcriptional regulatory protein, C terminal DGN16_14635 PF00672 HAMP domain DGN16_14635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_14635 PF00512 His Kinase A (phospho-acceptor) domain DGN16_14640 PF00999 Sodium/hydrogen exchanger family DGN16_14645 PF00144 Beta-lactamase DGN16_14650 PF03737 Aldolase/RraA DGN16_14665 PF00990 Diguanylate cyclase, GGDEF domain DGN16_14670 PF00849 RNA pseudouridylate synthase DGN16_14670 PF01479 S4 domain DGN16_14675 PF08448 PAS fold DGN16_14675 PF00563 EAL domain DGN16_14675 PF00990 Diguanylate cyclase, GGDEF domain DGN16_14680 PF00271 Helicase conserved C-terminal domain DGN16_14680 PF03880 DbpA RNA binding domain DGN16_14680 PF00270 DEAD/DEAH box helicase DGN16_14685 PF04542 Sigma-70 region 2 DGN16_14685 PF08281 Sigma-70, region 4 DGN16_14730 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DGN16_14730 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DGN16_14745 PF00654 Voltage gated chloride channel DGN16_14750 PF00107 Zinc-binding dehydrogenase DGN16_14750 PF08240 Alcohol dehydrogenase GroES-like domain DGN16_14770 PF07715 TonB-dependent Receptor Plug Domain DGN16_14770 PF00593 TonB dependent receptor DGN16_14795 PF00082 Subtilase family DGN16_14795 PF01483 Proprotein convertase P-domain DGN16_14805 PF00248 Aldo/keto reductase family DGN16_14810 PF07690 Major Facilitator Superfamily DGN16_14815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN16_14815 PF03466 LysR substrate binding domain DGN16_14825 PF06719 AraC-type transcriptional regulator N-terminus DGN16_14825 PF12833 Helix-turn-helix domain DGN16_14835 PF16859 Tetracyclin repressor-like, C-terminal domain DGN16_14835 PF00440 Bacterial regulatory proteins, tetR family DGN16_14840 PF02321 Outer membrane efflux protein DGN16_14845 PF00873 AcrB/AcrD/AcrF family DGN16_14850 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGN16_14850 PF00529 HlyD membrane-fusion protein of T1SS DGN16_14860 PF01475 Ferric uptake regulator family DGN16_14865 PF00749 tRNA synthetases class I (E and Q), catalytic domain DGN16_14890 PF06123 Inner membrane protein CreD DGN16_14900 PF00672 HAMP domain DGN16_14900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_14900 PF00512 His Kinase A (phospho-acceptor) domain DGN16_14905 PF00072 Response regulator receiver domain DGN16_14905 PF00486 Transcriptional regulatory protein, C terminal DGN16_14910 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ DGN16_14920 PF17757 UvrB interaction domain DGN16_14920 PF03461 TRCF domain DGN16_14920 PF00271 Helicase conserved C-terminal domain DGN16_14920 PF00270 DEAD/DEAH box helicase DGN16_14920 PF02559 CarD-like/TRCF domain DGN16_14930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_14930 PF02895 Signal transducing histidine kinase, homodimeric domain DGN16_14930 PF01627 Hpt domain DGN16_14930 PF01584 CheW-like domain DGN16_14930 PF09078 CheY binding DGN16_14935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN16_14935 PF02203 Tar ligand binding domain homologue DGN16_14935 PF00672 HAMP domain DGN16_14940 PF01584 CheW-like domain DGN16_14945 PF00563 EAL domain DGN16_14945 PF00990 Diguanylate cyclase, GGDEF domain DGN16_14945 PF13426 PAS domain DGN16_14950 PF01739 CheR methyltransferase, SAM binding domain DGN16_14950 PF03705 CheR methyltransferase, all-alpha domain DGN16_14955 PF01339 CheB methylesterase DGN16_14955 PF00072 Response regulator receiver domain DGN16_14960 PF13091 PLD-like domain DGN16_14965 PF05649 Peptidase family M13 DGN16_14965 PF01431 Peptidase family M13 DGN16_14975 PF00300 Histidine phosphatase superfamily (branch 1) DGN16_14980 PF04493 Endonuclease V DGN16_14995 PF02678 Pirin DGN16_14995 PF05726 Pirin C-terminal cupin domain DGN16_15010 PF02678 Pirin DGN16_15010 PF05726 Pirin C-terminal cupin domain DGN16_15015 PF02554 Carbon starvation protein CstA DGN16_15015 PF13722 5TM C-terminal transporter carbon starvation CstA DGN16_15020 PF04328 Selenoprotein, putative DGN16_15065 PF13478 XdhC Rossmann domain DGN16_15065 PF02625 XdhC and CoxI family DGN16_15070 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DGN16_15070 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DGN16_15075 PF03450 CO dehydrogenase flavoprotein C-terminal domain DGN16_15075 PF00941 FAD binding domain in molybdopterin dehydrogenase DGN16_15080 PF10518 TAT (twin-arginine translocation) pathway signal sequence DGN16_15080 PF01799 [2Fe-2S] binding domain DGN16_15080 PF00111 2Fe-2S iron-sulfur cluster binding domain DGN16_15085 PF00550 Phosphopantetheine attachment site DGN16_15085 PF02801 Beta-ketoacyl synthase, C-terminal domain DGN16_15085 PF08659 KR domain DGN16_15085 PF00109 Beta-ketoacyl synthase, N-terminal domain DGN16_15085 PF14765 Polyketide synthase dehydratase DGN16_15085 PF00107 Zinc-binding dehydrogenase DGN16_15085 PF08240 Alcohol dehydrogenase GroES-like domain DGN16_15085 PF00698 Acyl transferase domain DGN16_15085 PF16197 Ketoacyl-synthetase C-terminal extension DGN16_15090 PF01590 GAF domain DGN16_15090 PF00563 EAL domain DGN16_15090 PF00360 Phytochrome region DGN16_15090 PF00990 Diguanylate cyclase, GGDEF domain DGN16_15095 PF00436 Single-strand binding protein family DGN16_15100 PF00348 Polyprenyl synthetase DGN16_15115 PF02875 Mur ligase family, glutamate ligase domain DGN16_15115 PF08245 Mur ligase middle domain DGN16_15130 PF00696 Amino acid kinase family DGN16_15130 PF01842 ACT domain DGN16_15135 PF02567 Phenazine biosynthesis-like protein DGN16_15140 PF02567 Phenazine biosynthesis-like protein DGN16_15150 PF02566 OsmC-like protein DGN16_15155 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DGN16_15155 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DGN16_15160 PF03652 Holliday junction resolvase DGN16_15165 PF02622 Uncharacterized ACR, COG1678 DGN16_15175 PF13673 Acetyltransferase (GNAT) domain DGN16_15175 PF13302 Acetyltransferase (GNAT) domain DGN16_15175 PF03352 Methyladenine glycosylase DGN16_15175 PF00117 Glutamine amidotransferase class-I DGN16_15175 PF00958 GMP synthase C terminal domain DGN16_15190 PF00437 Type II/IV secretion system protein DGN16_15195 PF00437 Type II/IV secretion system protein DGN16_15200 PF01168 Alanine racemase, N-terminal domain DGN16_15205 PF03807 NADP oxidoreductase coenzyme F420-dependent DGN16_15205 PF14748 Pyrroline-5-carboxylate reductase dimerisation DGN16_15215 PF01551 Peptidase family M23 DGN16_15235 PF01965 DJ-1/PfpI family DGN16_15245 PF02082 Transcriptional regulator DGN16_15250 PF01458 Uncharacterized protein family (UPF0051) DGN16_15255 PF00005 ABC transporter DGN16_15260 PF01458 Uncharacterized protein family (UPF0051) DGN16_15265 PF00266 Aminotransferase class-V DGN16_15275 PF00355 Rieske [2Fe-2S] domain DGN16_15280 PF07715 TonB-dependent Receptor Plug Domain DGN16_15280 PF00593 TonB dependent receptor DGN16_15285 PF18331 PKHD-type hydroxylase C-terminal domain DGN16_15285 PF13640 2OG-Fe(II) oxygenase superfamily DGN16_15310 PF02424 ApbE family DGN16_15315 PF00667 FAD binding domain DGN16_15315 PF00258 Flavodoxin DGN16_15315 PF00175 Oxidoreductase NAD-binding domain DGN16_15325 PF05598 Transposase domain (DUF772) DGN16_15325 PF01609 Transposase DDE domain DGN16_15350 PF01636 Phosphotransferase enzyme family DGN16_15355 PF00483 Nucleotidyl transferase DGN16_15365 PF00308 Bacterial dnaA protein DGN16_15370 PF01594 AI-2E family transporter DGN16_15380 PF02769 AIR synthase related protein, C-terminal domain DGN16_15380 PF00586 AIR synthase related protein, N-terminal domain DGN16_15390 PF00551 Formyl transferase DGN16_15410 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DGN16_15415 PF01722 BolA-like protein DGN16_15420 PF01380 SIS domain DGN16_15420 PF00571 CBS domain DGN16_15435 PF03968 OstA-like protein DGN16_15440 PF00005 ABC transporter DGN16_15445 PF00309 Sigma-54 factor, Activator interacting domain (AID) DGN16_15445 PF04963 Sigma-54 factor, core binding domain DGN16_15445 PF04552 Sigma-54, DNA binding domain DGN16_15450 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DGN16_15455 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DGN16_15460 PF02603 HPr Serine kinase N terminus DGN16_15460 PF07475 HPr Serine kinase C-terminal domain DGN16_15465 PF03668 P-loop ATPase protein family DGN16_15475 PF00381 PTS HPr component phosphorylation site DGN16_15480 PF05524 PEP-utilising enzyme, N-terminal DGN16_15480 PF00391 PEP-utilising enzyme, mobile domain DGN16_15480 PF02896 PEP-utilising enzyme, TIM barrel domain DGN16_15490 PF00571 CBS domain DGN16_15490 PF01769 Divalent cation transporter DGN16_15490 PF03448 MgtE intracellular N domain DGN16_15495 PF00756 Putative esterase DGN16_15500 PF02322 Cytochrome bd terminal oxidase subunit II DGN16_15505 PF01654 Cytochrome bd terminal oxidase subunit I DGN16_15515 PF00324 Amino acid permease DGN16_15525 PF00872 Transposase, Mutator family DGN16_15540 PF00561 alpha/beta hydrolase fold DGN16_15550 PF00196 Bacterial regulatory proteins, luxR family DGN16_15555 PF00324 Amino acid permease DGN16_15570 PF01609 Transposase DDE domain DGN16_15570 PF05598 Transposase domain (DUF772) DGN16_15600 PF12706 Beta-lactamase superfamily domain DGN16_15610 PF04820 Tryptophan halogenase DGN16_15670 PF00376 MerR family regulatory protein DGN16_15670 PF09278 MerR, DNA binding DGN16_15675 PF07690 Major Facilitator Superfamily DGN16_15690 PF03738 Glutathionylspermidine synthase preATP-grasp DGN16_15715 PF04012 PspA/IM30 family DGN16_15725 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DGN16_15725 PF01243 Pyridoxamine 5'-phosphate oxidase DGN16_15730 PF01202 Shikimate kinase DGN16_15735 PF01761 3-dehydroquinate synthase DGN16_15745 PF01208 Uroporphyrinogen decarboxylase (URO-D) DGN16_15750 PF07690 Major Facilitator Superfamily DGN16_15755 PF17149 Periplasmic sensor domain found in signal transduction proteins DGN16_15755 PF00672 HAMP domain DGN16_15755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_15755 PF00512 His Kinase A (phospho-acceptor) domain DGN16_15755 PF01627 Hpt domain DGN16_15755 PF00072 Response regulator receiver domain DGN16_15760 PF00512 His Kinase A (phospho-acceptor) domain DGN16_15760 PF00672 HAMP domain DGN16_15760 PF17149 Periplasmic sensor domain found in signal transduction proteins DGN16_15760 PF01627 Hpt domain DGN16_15760 PF00072 Response regulator receiver domain DGN16_15760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_15770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_15770 PF00512 His Kinase A (phospho-acceptor) domain DGN16_15770 PF01627 Hpt domain DGN16_15770 PF00072 Response regulator receiver domain DGN16_15775 PF04264 YceI-like domain DGN16_15795 PF03313 Serine dehydratase alpha chain DGN16_15795 PF03315 Serine dehydratase beta chain DGN16_15800 PF12697 Alpha/beta hydrolase family DGN16_15810 PF00696 Amino acid kinase family DGN16_15810 PF00742 Homoserine dehydrogenase DGN16_15810 PF03447 Homoserine dehydrogenase, NAD binding domain DGN16_15815 PF01053 Cys/Met metabolism PLP-dependent enzyme DGN16_15820 PF00561 alpha/beta hydrolase fold DGN16_15825 PF01551 Peptidase family M23 DGN16_15825 PF08525 Opacity-associated protein A N-terminal motif DGN16_15825 PF01476 LysM domain DGN16_15830 PF16658 Class II release factor RF3, C-terminal domain DGN16_15830 PF00009 Elongation factor Tu GTP binding domain DGN16_15835 PF03006 Haemolysin-III related DGN16_15840 PF05170 AsmA family DGN16_15845 PF00478 IMP dehydrogenase / GMP reductase domain DGN16_15845 PF00571 CBS domain DGN16_15850 PF00535 Glycosyl transferase family 2 DGN16_15855 PF00912 Transglycosylase DGN16_15860 PF01430 Hsp33 protein DGN16_15870 PF00593 TonB dependent receptor DGN16_15870 PF07715 TonB-dependent Receptor Plug Domain DGN16_15875 PF00872 Transposase, Mutator family DGN16_15885 PF05598 Transposase domain (DUF772) DGN16_15885 PF01609 Transposase DDE domain DGN16_15890 PF00440 Bacterial regulatory proteins, tetR family DGN16_15895 PF00561 alpha/beta hydrolase fold DGN16_15900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DGN16_15900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DGN16_15900 PF09317 Domain of unknown function (DUF1974) DGN16_15925 PF00872 Transposase, Mutator family DGN16_15945 PF01597 Glycine cleavage H-protein DGN16_15950 PF08669 Glycine cleavage T-protein C-terminal barrel domain DGN16_15950 PF01571 Aminomethyltransferase folate-binding domain DGN16_15965 PF02694 Uncharacterised BCR, YnfA/UPF0060 family DGN16_15970 PF03819 MazG nucleotide pyrophosphohydrolase domain DGN16_15975 PF00459 Inositol monophosphatase family DGN16_15980 PF00293 NUDIX domain DGN16_15985 PF00202 Aminotransferase class-III DGN16_15990 PF04452 RNA methyltransferase DGN16_15995 PF02685 Glucokinase DGN16_16010 PF00704 Glycosyl hydrolases family 18 DGN16_16010 PF01476 LysM domain DGN16_16025 PF01915 Glycosyl hydrolase family 3 C-terminal domain DGN16_16025 PF00933 Glycosyl hydrolase family 3 N terminal domain DGN16_16025 PF14310 Fibronectin type III-like domain DGN16_16025 PF07691 PA14 domain DGN16_16045 PF13520 Amino acid permease DGN16_16055 PF02056 Family 4 glycosyl hydrolase DGN16_16055 PF11975 Family 4 glycosyl hydrolase C-terminal domain DGN16_16065 PF07971 Glycosyl hydrolase family 92 DGN16_16065 PF17678 Glycosyl hydrolase family 92 N-terminal domain DGN16_16070 PF01301 Glycosyl hydrolases family 35 DGN16_16105 PF03932 CutC family DGN16_16110 PF01112 Asparaginase DGN16_16120 PF13302 Acetyltransferase (GNAT) domain DGN16_16135 PF00072 Response regulator receiver domain DGN16_16135 PF01627 Hpt domain DGN16_16135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_16135 PF02895 Signal transducing histidine kinase, homodimeric domain DGN16_16135 PF01584 CheW-like domain DGN16_16140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN16_16140 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term DGN16_16145 PF01584 CheW-like domain DGN16_16150 PF00072 Response regulator receiver domain DGN16_16155 PF00072 Response regulator receiver domain DGN16_16160 PF02951 Prokaryotic glutathione synthetase, N-terminal domain DGN16_16160 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain DGN16_16170 PF03747 ADP-ribosylglycohydrolase DGN16_16175 PF00814 Glycoprotease family DGN16_16180 PF13307 Helicase C-terminal domain DGN16_16180 PF04851 Type III restriction enzyme, res subunit DGN16_16190 PF14814 Bifunctional transglycosylase second domain DGN16_16190 PF00912 Transglycosylase DGN16_16190 PF00905 Penicillin binding protein transpeptidase domain DGN16_16195 PF00535 Glycosyl transferase family 2 DGN16_16215 PF02824 TGS domain DGN16_16215 PF13291 ACT domain DGN16_16215 PF04607 Region found in RelA / SpoT proteins DGN16_16220 PF08042 PqqA family DGN16_16225 PF12706 Beta-lactamase superfamily domain DGN16_16230 PF03070 TENA/THI-4/PQQC family DGN16_16235 PF05402 Coenzyme PQQ synthesis protein D (PqqD) DGN16_16240 PF04055 Radical SAM superfamily DGN16_16240 PF13186 Iron-sulfur cluster-binding domain DGN16_16255 PF02685 Glucokinase DGN16_16265 PF00271 Helicase conserved C-terminal domain DGN16_16265 PF04408 Helicase associated domain (HA2) DGN16_16265 PF11898 Domain of unknown function (DUF3418) DGN16_16265 PF00270 DEAD/DEAH box helicase DGN16_16265 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DGN16_16270 PF00210 Ferritin-like domain DGN16_16275 PF09382 RQC domain DGN16_16275 PF16124 RecQ zinc-binding DGN16_16275 PF00570 HRDC domain DGN16_16275 PF00270 DEAD/DEAH box helicase DGN16_16275 PF00271 Helicase conserved C-terminal domain DGN16_16315 PF00672 HAMP domain DGN16_16315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN16_16315 PF02203 Tar ligand binding domain homologue DGN16_16320 PF01810 LysE type translocator DGN16_16325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN16_16325 PF03466 LysR substrate binding domain DGN16_16335 PF13581 Histidine kinase-like ATPase domain DGN16_16335 PF07536 HWE histidine kinase DGN16_16335 PF13426 PAS domain DGN16_16340 PF06508 Queuosine biosynthesis protein QueC DGN16_16350 PF04055 Radical SAM superfamily DGN16_16360 PF00691 OmpA family DGN16_16365 PF07676 WD40-like Beta Propeller Repeat DGN16_16365 PF04052 TolB amino-terminal domain DGN16_16375 PF02472 Biopolymer transport protein ExbD/TolR DGN16_16380 PF01618 MotA/TolQ/ExbB proton channel family DGN16_16385 PF03061 Thioesterase superfamily DGN16_16390 PF17864 RuvB AAA lid domain DGN16_16390 PF05491 RuvB C-terminal winged helix domain DGN16_16390 PF05496 Holliday junction DNA helicase RuvB P-loop domain DGN16_16400 PF02705 K+ potassium transporter DGN16_16405 PF07499 RuvA, C-terminal domain DGN16_16405 PF01330 RuvA N terminal domain DGN16_16410 PF02075 Crossover junction endodeoxyribonuclease RuvC DGN16_16415 PF01709 Transcriptional regulator DGN16_16430 PF02938 GAD domain DGN16_16430 PF00152 tRNA synthetases class II (D, K and N) DGN16_16430 PF01336 OB-fold nucleic acid binding domain DGN16_16445 PF07690 Major Facilitator Superfamily DGN16_16455 PF04185 Phosphoesterase family DGN16_16455 PF05506 Domain of unknown function (DUF756) DGN16_16475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN16_16475 PF03466 LysR substrate binding domain DGN16_16485 PF12848 ABC transporter DGN16_16485 PF00005 ABC transporter DGN16_16490 PF07715 TonB-dependent Receptor Plug Domain DGN16_16490 PF00593 TonB dependent receptor DGN16_16510 PF07715 TonB-dependent Receptor Plug Domain DGN16_16510 PF00593 TonB dependent receptor DGN16_16515 PF07715 TonB-dependent Receptor Plug Domain DGN16_16515 PF00593 TonB dependent receptor DGN16_16530 PF00999 Sodium/hydrogen exchanger family DGN16_16530 PF02254 TrkA-N domain DGN16_16540 PF07660 Secretin and TonB N terminus short domain DGN16_16540 PF00593 TonB dependent receptor DGN16_16540 PF07715 TonB-dependent Receptor Plug Domain DGN16_16550 PF06276 Ferric iron reductase FhuF-like transporter DGN16_16550 PF04183 IucA / IucC family DGN16_16555 PF07690 Major Facilitator Superfamily DGN16_16560 PF06276 Ferric iron reductase FhuF-like transporter DGN16_16560 PF04183 IucA / IucC family DGN16_16565 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DGN16_16565 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DGN16_16580 PF02654 Cobalamin-5-phosphate synthase DGN16_16590 PF02277 Phosphoribosyltransferase DGN16_16595 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase DGN16_16600 PF07685 CobB/CobQ-like glutamine amidotransferase domain DGN16_16600 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DGN16_16610 PF03186 CobD/Cbib protein DGN16_16610 PF17113 Regulatory signalling modulator protein AmpE DGN16_16615 PF12557 Cob(I)alamin adenosyltransferase N terminal DGN16_16615 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP DGN16_16635 PF07715 TonB-dependent Receptor Plug Domain DGN16_16635 PF00593 TonB dependent receptor DGN16_16640 PF07724 AAA domain (Cdc48 subfamily) DGN16_16640 PF00004 ATPase family associated with various cellular activities (AAA) DGN16_16640 PF17871 AAA lid domain DGN16_16640 PF02861 Clp amino terminal domain, pathogenicity island component DGN16_16640 PF10431 C-terminal, D2-small domain, of ClpB protein DGN16_16645 PF00005 ABC transporter DGN16_16650 PF00528 Binding-protein-dependent transport system inner membrane component DGN16_16655 PF09084 NMT1/THI5 like DGN16_16660 PF00248 Aldo/keto reductase family DGN16_16665 PF00296 Luciferase-like monooxygenase DGN16_16685 PF01541 GIY-YIG catalytic domain DGN16_16720 PF07715 TonB-dependent Receptor Plug Domain DGN16_16720 PF00593 TonB dependent receptor DGN16_16725 PF02358 Trehalose-phosphatase DGN16_16730 PF00723 Glycosyl hydrolases family 15 DGN16_16735 PF00982 Glycosyltransferase family 20 DGN16_16740 PF01011 PQQ enzyme repeat DGN16_16750 PF02203 Tar ligand binding domain homologue DGN16_16750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN16_16750 PF00672 HAMP domain DGN16_16755 PF04134 Protein of unknown function, DUF393 DGN16_16765 PF02578 Multi-copper polyphenol oxidoreductase laccase DGN16_16770 PF00849 RNA pseudouridylate synthase DGN16_16775 PF13525 Outer membrane lipoprotein DGN16_16785 PF02540 NAD synthase DGN16_16785 PF00795 Carbon-nitrogen hydrolase DGN16_16800 PF00549 CoA-ligase DGN16_16800 PF02629 CoA binding domain DGN16_16805 PF00549 CoA-ligase DGN16_16805 PF08442 ATP-grasp domain DGN16_16810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_16810 PF00512 His Kinase A (phospho-acceptor) domain DGN16_16815 PF02954 Bacterial regulatory protein, Fis family DGN16_16815 PF00072 Response regulator receiver domain DGN16_16815 PF00158 Sigma-54 interaction domain DGN16_16825 PF00437 Type II/IV secretion system protein DGN16_16825 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DGN16_16830 PF00114 Pilin (bacterial filament) DGN16_16830 PF07963 Prokaryotic N-terminal methylation motif DGN16_16835 PF00114 Pilin (bacterial filament) DGN16_16835 PF07963 Prokaryotic N-terminal methylation motif DGN16_16840 PF00482 Type II secretion system (T2SS), protein F DGN16_16845 PF06750 Bacterial Peptidase A24 N-terminal domain DGN16_16845 PF01478 Type IV leader peptidase family DGN16_16850 PF01121 Dephospho-CoA kinase DGN16_16865 PF05598 Transposase domain (DUF772) DGN16_16865 PF01609 Transposase DDE domain DGN16_16880 PF05598 Transposase domain (DUF772) DGN16_16880 PF01609 Transposase DDE domain DGN16_16890 PF00512 His Kinase A (phospho-acceptor) domain DGN16_16890 PF00989 PAS fold DGN16_16890 PF11808 Phosphate regulon sensor protein PhoR DGN16_16890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_16895 PF00486 Transcriptional regulatory protein, C terminal DGN16_16895 PF00072 Response regulator receiver domain DGN16_16905 PF18030 RimK PreATP-grasp domain DGN16_16905 PF08443 RimK-like ATP-grasp domain DGN16_16910 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DGN16_16910 PF00128 Alpha amylase, catalytic domain DGN16_16945 PF05598 Transposase domain (DUF772) DGN16_16945 PF01609 Transposase DDE domain DGN16_16965 PF00872 Transposase, Mutator family DGN16_16980 PF00872 Transposase, Mutator family DGN16_17075 PF00563 EAL domain DGN16_17075 PF08448 PAS fold DGN16_17075 PF08447 PAS fold DGN16_17075 PF00990 Diguanylate cyclase, GGDEF domain DGN16_17090 PF01609 Transposase DDE domain DGN16_17090 PF05598 Transposase domain (DUF772) DGN16_17160 PF04610 TrbL/VirB6 plasmid conjugal transfer protein DGN16_17195 PF01119 DNA mismatch repair protein, C-terminal domain DGN16_17195 PF08676 MutL C terminal dimerisation domain DGN16_17215 PF00145 C-5 cytosine-specific DNA methylase DGN16_17235 PF04002 RadC-like JAB domain DGN16_17280 PF05598 Transposase domain (DUF772) DGN16_17280 PF01609 Transposase DDE domain DGN16_17370 PF00657 GDSL-like Lipase/Acylhydrolase DGN16_17370 PF03797 Autotransporter beta-domain DGN16_17380 PF05690 Thiazole biosynthesis protein ThiG DGN16_17385 PF02390 Putative methyltransferase DGN16_17390 PF02080 TrkA-C domain DGN16_17390 PF03600 Citrate transporter DGN16_17410 PF01557 Fumarylacetoacetate (FAA) hydrolase family DGN16_17415 PF01741 Large-conductance mechanosensitive channel, MscL DGN16_17425 PF00356 Bacterial regulatory proteins, lacI family DGN16_17435 PF00703 Glycosyl hydrolases family 2 DGN16_17435 PF02837 Glycosyl hydrolases family 2, sugar binding domain DGN16_17435 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain DGN16_17440 PF14508 Glycosyl-hydrolase 97 N-terminal DGN16_17440 PF10566 Glycoside hydrolase 97 DGN16_17440 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation DGN16_17445 PF00135 Carboxylesterase family DGN16_17450 PF00588 SpoU rRNA Methylase family DGN16_17450 PF08032 RNA 2'-O ribose methyltransferase substrate binding DGN16_17460 PF01433 Peptidase family M1 domain DGN16_17460 PF11838 ERAP1-like C-terminal domain DGN16_17465 PF00873 AcrB/AcrD/AcrF family DGN16_17470 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGN16_17470 PF00529 HlyD membrane-fusion protein of T1SS DGN16_17475 PF00009 Elongation factor Tu GTP binding domain DGN16_17480 PF01507 Phosphoadenosine phosphosulfate reductase family DGN16_17485 PF00175 Oxidoreductase NAD-binding domain DGN16_17485 PF00258 Flavodoxin DGN16_17485 PF00667 FAD binding domain DGN16_17490 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DGN16_17490 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DGN16_17495 PF01507 Phosphoadenosine phosphosulfate reductase family DGN16_17500 PF01609 Transposase DDE domain DGN16_17500 PF05598 Transposase domain (DUF772) DGN16_17520 PF00072 Response regulator receiver domain DGN16_17520 PF01627 Hpt domain DGN16_17520 PF00512 His Kinase A (phospho-acceptor) domain DGN16_17520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_17535 PF03466 LysR substrate binding domain DGN16_17535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN16_17540 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DGN16_17540 PF14824 Sirohaem biosynthesis protein central DGN16_17540 PF10414 Sirohaem synthase dimerisation region DGN16_17545 PF00291 Pyridoxal-phosphate dependent enzyme DGN16_17555 PF01661 Macro domain DGN16_17560 PF00274 Fructose-bisphosphate aldolase class-I DGN16_17575 PF00224 Pyruvate kinase, barrel domain DGN16_17575 PF02887 Pyruvate kinase, alpha/beta domain DGN16_17580 PF13419 Haloacid dehalogenase-like hydrolase DGN16_17585 PF00162 Phosphoglycerate kinase DGN16_17610 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DGN16_17610 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DGN16_17620 PF03922 OmpW family DGN16_17625 PF03922 OmpW family DGN16_17635 PF00753 Metallo-beta-lactamase superfamily DGN16_17635 PF04273 Putative phosphatase (DUF442) DGN16_17645 PF00528 Binding-protein-dependent transport system inner membrane component DGN16_17650 PF00005 ABC transporter DGN16_17650 PF03459 TOBE domain DGN16_17685 PF03734 L,D-transpeptidase catalytic domain DGN16_17685 PF01476 LysM domain DGN16_17690 PF04225 Opacity-associated protein A LysM-like domain DGN16_17690 PF01551 Peptidase family M23 DGN16_17695 PF00593 TonB dependent receptor DGN16_17695 PF07715 TonB-dependent Receptor Plug Domain DGN16_17705 PF00456 Transketolase, thiamine diphosphate binding domain DGN16_17705 PF02779 Transketolase, pyrimidine binding domain DGN16_17705 PF02780 Transketolase, C-terminal domain DGN16_17710 PF00375 Sodium:dicarboxylate symporter family DGN16_17725 PF07584 Aerotolerance regulator N-terminal DGN16_17725 PF00092 von Willebrand factor type A domain DGN16_17745 PF17863 AAA lid domain DGN16_17745 PF07726 ATPase family associated with various cellular activities (AAA) DGN16_17760 PF03958 Bacterial type II/III secretion system short domain DGN16_17760 PF07660 Secretin and TonB N terminus short domain DGN16_17760 PF11741 AMIN domain DGN16_17760 PF00263 Bacterial type II and III secretion system protein DGN16_17765 PF04351 Pilus assembly protein, PilP DGN16_17770 PF04350 Pilus assembly protein, PilO DGN16_17775 PF05137 Fimbrial assembly protein (PilN) DGN16_17780 PF11104 Type IV pilus assembly protein PilM; DGN16_17785 PF17092 Penicillin-binding protein OB-like domain DGN16_17785 PF00905 Penicillin binding protein transpeptidase domain DGN16_17785 PF00912 Transglycosylase DGN16_17795 PF00285 Citrate synthase, C-terminal domain DGN16_17800 PF01197 Ribosomal protein L31 DGN16_17805 PF01156 Inosine-uridine preferring nucleoside hydrolase DGN16_17810 PF00271 Helicase conserved C-terminal domain DGN16_17810 PF00270 DEAD/DEAH box helicase DGN16_17810 PF17191 RecG wedge domain DGN16_17815 PF01042 Endoribonuclease L-PSP DGN16_17820 PF08666 SAF domain DGN16_17820 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus DGN16_17825 PF03573 outer membrane porin, OprD family DGN16_17830 PF13378 Enolase C-terminal domain-like DGN16_17830 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DGN16_17835 PF07690 Major Facilitator Superfamily DGN16_17840 PF00171 Aldehyde dehydrogenase family DGN16_17845 PF00701 Dihydrodipicolinate synthetase family DGN16_17850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN16_17850 PF03466 LysR substrate binding domain DGN16_17855 PF04607 Region found in RelA / SpoT proteins DGN16_17855 PF02824 TGS domain DGN16_17855 PF13291 ACT domain DGN16_17860 PF01192 RNA polymerase Rpb6 DGN16_17865 PF00625 Guanylate kinase DGN16_17870 PF08340 Domain of unknown function (DUF1732) DGN16_17870 PF03755 YicC-like family, N-terminal region DGN16_17875 PF03725 3' exoribonuclease family, domain 2 DGN16_17875 PF01138 3' exoribonuclease family, domain 1 DGN16_17885 PF01725 Ham1 family DGN16_17890 PF06969 HemN C-terminal domain DGN16_17890 PF04055 Radical SAM superfamily DGN16_17905 PF00557 Metallopeptidase family M24 DGN16_17915 PF00557 Metallopeptidase family M24 DGN16_17915 PF05195 Aminopeptidase P, N-terminal domain DGN16_17920 PF03695 Uncharacterised protein family (UPF0149) DGN16_17930 PF05164 Cell division protein ZapA DGN16_17940 PF01812 5-formyltetrahydrofolate cyclo-ligase family DGN16_17950 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DGN16_17960 PF13369 Transglutaminase-like superfamily DGN16_17970 PF00301 Rubredoxin DGN16_17975 PF02581 Thiamine monophosphate synthase DGN16_17995 PF00202 Aminotransferase class-III DGN16_18000 PF17874 MalT-like TPR region DGN16_18000 PF00196 Bacterial regulatory proteins, luxR family DGN16_18005 PF00127 Copper binding proteins, plastocyanin/azurin family DGN16_18010 PF00155 Aminotransferase class I and II DGN16_18020 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DGN16_18020 PF00034 Cytochrome c DGN16_18025 PF01593 Flavin containing amine oxidoreductase DGN16_18045 PF00202 Aminotransferase class-III DGN16_18050 PF00027 Cyclic nucleotide-binding domain DGN16_18050 PF00520 Ion transport protein DGN16_18065 PF01569 PAP2 superfamily DGN16_18070 PF01062 Bestrophin, RFP-TM, chloride channel DGN16_18080 PF01225 Mur ligase family, catalytic domain DGN16_18080 PF02875 Mur ligase family, glutamate ligase domain DGN16_18080 PF08245 Mur ligase middle domain DGN16_18090 PF00365 Phosphofructokinase DGN16_18100 PF03030 Inorganic H+ pyrophosphatase DGN16_18110 PF00719 Inorganic pyrophosphatase DGN16_18120 PF00593 TonB dependent receptor DGN16_18120 PF07715 TonB-dependent Receptor Plug Domain DGN16_18135 PF13667 ThiC-associated domain DGN16_18135 PF01964 Radical SAM ThiC family DGN16_18145 PF07715 TonB-dependent Receptor Plug Domain DGN16_18145 PF00593 TonB dependent receptor DGN16_18150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGN16_18150 PF00672 HAMP domain DGN16_18150 PF02203 Tar ligand binding domain homologue DGN16_18160 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DGN16_18160 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DGN16_18165 PF00205 Thiamine pyrophosphate enzyme, central domain DGN16_18165 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DGN16_18165 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DGN16_18175 PF00291 Pyridoxal-phosphate dependent enzyme DGN16_18180 PF00682 HMGL-like DGN16_18180 PF08502 LeuA allosteric (dimerisation) domain DGN16_18185 PF00180 Isocitrate/isopropylmalate dehydrogenase DGN16_18190 PF00694 Aconitase C-terminal domain DGN16_18195 PF00330 Aconitase family (aconitate hydratase) DGN16_18200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN16_18210 PF00990 Diguanylate cyclase, GGDEF domain DGN16_18225 PF02321 Outer membrane efflux protein DGN16_18230 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DGN16_18235 PF03279 Bacterial lipid A biosynthesis acyltransferase DGN16_18260 PF00390 Malic enzyme, N-terminal domain DGN16_18260 PF01515 Phosphate acetyl/butaryl transferase DGN16_18260 PF03949 Malic enzyme, NAD binding domain DGN16_18265 PF00375 Sodium:dicarboxylate symporter family DGN16_18275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_18275 PF02743 Cache domain DGN16_18275 PF00512 His Kinase A (phospho-acceptor) domain DGN16_18280 PF07690 Major Facilitator Superfamily DGN16_18290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN16_18290 PF03466 LysR substrate binding domain DGN16_18295 PF00248 Aldo/keto reductase family DGN16_18310 PF00196 Bacterial regulatory proteins, luxR family DGN16_18310 PF00072 Response regulator receiver domain DGN16_18320 PF08521 Two-component sensor kinase N-terminal DGN16_18320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_18320 PF00512 His Kinase A (phospho-acceptor) domain DGN16_18325 PF00072 Response regulator receiver domain DGN16_18325 PF00486 Transcriptional regulatory protein, C terminal DGN16_18340 PF03600 Citrate transporter DGN16_18345 PF00106 short chain dehydrogenase DGN16_18350 PF00356 Bacterial regulatory proteins, lacI family DGN16_18365 PF00128 Alpha amylase, catalytic domain DGN16_18385 PF03193 RsgA GTPase DGN16_18390 PF00155 Aminotransferase class I and II DGN16_18405 PF01522 Polysaccharide deacetylase DGN16_18410 PF00462 Glutaredoxin DGN16_18425 PF01979 Amidohydrolase family DGN16_18430 PF01979 Amidohydrolase family DGN16_18460 PF05598 Transposase domain (DUF772) DGN16_18460 PF01609 Transposase DDE domain DGN16_18465 PF02645 Uncharacterised protein, DegV family COG1307 DGN16_18470 PF01327 Polypeptide deformylase DGN16_18480 PF03960 ArsC family DGN16_18495 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) DGN16_18500 PF01270 Glycosyl hydrolases family 8 DGN16_18505 PF03170 Bacterial cellulose synthase subunit DGN16_18510 PF07238 PilZ domain DGN16_18510 PF00535 Glycosyl transferase family 2 DGN16_18510 PF03552 Cellulose synthase DGN16_18525 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DGN16_18525 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DGN16_18570 PF07715 TonB-dependent Receptor Plug Domain DGN16_18570 PF00593 TonB dependent receptor DGN16_18580 PF00392 Bacterial regulatory proteins, gntR family DGN16_18580 PF07702 UTRA domain DGN16_18590 PF00263 Bacterial type II and III secretion system protein DGN16_18590 PF03958 Bacterial type II/III secretion system short domain DGN16_18600 PF10741 Type II secretion system (T2SS), protein M subtype b DGN16_18605 PF05137 Fimbrial assembly protein (PilN) DGN16_18610 PF03934 Type II secretion system (T2SS), protein K DGN16_18620 PF07963 Prokaryotic N-terminal methylation motif DGN16_18625 PF12019 Type II transport protein GspH DGN16_18630 PF08334 Type II secretion system (T2SS), protein G DGN16_18635 PF00482 Type II secretion system (T2SS), protein F DGN16_18645 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DGN16_18645 PF00437 Type II/IV secretion system protein DGN16_18650 PF04151 Bacterial pre-peptidase C-terminal domain DGN16_18650 PF00082 Subtilase family DGN16_18660 PF04151 Bacterial pre-peptidase C-terminal domain DGN16_18660 PF00082 Subtilase family DGN16_18665 PF13018 Extended Signal Peptide of Type V secretion system DGN16_18665 PF03895 YadA-like membrane anchor domain DGN16_18665 PF05658 Head domain of trimeric autotransporter adhesin DGN16_18665 PF05662 Coiled stalk of trimeric autotransporter adhesin DGN16_18670 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DGN16_18670 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal DGN16_18670 PF02769 AIR synthase related protein, C-terminal domain DGN16_18680 PF13098 Thioredoxin-like domain DGN16_18680 PF10411 Disulfide bond isomerase protein N-terminus DGN16_18695 PF02899 Phage integrase, N-terminal SAM-like domain DGN16_18695 PF00589 Phage integrase family DGN16_18710 PF03739 Lipopolysaccharide export system permease LptF/LptG DGN16_18720 PF00883 Cytosol aminopeptidase family, catalytic domain DGN16_18720 PF02789 Cytosol aminopeptidase family, N-terminal domain DGN16_18740 PF08264 Anticodon-binding domain of tRNA DGN16_18740 PF00133 tRNA synthetases class I (I, L, M and V) DGN16_18740 PF10458 Valyl tRNA synthetase tRNA binding arm DGN16_18750 PF00593 TonB dependent receptor DGN16_18750 PF07715 TonB-dependent Receptor Plug Domain DGN16_18755 PF01464 Transglycosylase SLT domain DGN16_18755 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain DGN16_18765 PF00872 Transposase, Mutator family DGN16_18785 PF01066 CDP-alcohol phosphatidyltransferase DGN16_18795 PF03129 Anticodon binding domain DGN16_18795 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DGN16_18795 PF04073 Aminoacyl-tRNA editing domain DGN16_18800 PF00816 H-NS histone family DGN16_18810 PF02405 Permease MlaE DGN16_18815 PF00005 ABC transporter DGN16_18820 PF02470 MlaD protein DGN16_18820 PF03886 ABC-type transport auxiliary lipoprotein component DGN16_18840 PF01144 Coenzyme A transferase DGN16_18845 PF01144 Coenzyme A transferase DGN16_18850 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DGN16_18850 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DGN16_18850 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DGN16_18850 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DGN16_18855 PF01050 Mannose-6-phosphate isomerase DGN16_18855 PF00483 Nucleotidyl transferase DGN16_18860 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DGN16_18860 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DGN16_18860 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DGN16_18865 PF04321 RmlD substrate binding domain DGN16_18870 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DGN16_18875 PF00483 Nucleotidyl transferase DGN16_18880 PF16363 GDP-mannose 4,6 dehydratase DGN16_18885 PF01012 Electron transfer flavoprotein domain DGN16_18890 PF01012 Electron transfer flavoprotein domain DGN16_18890 PF00766 Electron transfer flavoprotein FAD-binding domain DGN16_18900 PF00535 Glycosyl transferase family 2 DGN16_18910 PF01593 Flavin containing amine oxidoreductase DGN16_18925 PF16363 GDP-mannose 4,6 dehydratase DGN16_18930 PF16363 GDP-mannose 4,6 dehydratase DGN16_18935 PF00534 Glycosyl transferases group 1 DGN16_18935 PF13477 Glycosyl transferase 4-like DGN16_18940 PF00069 Protein kinase domain DGN16_18940 PF13847 Methyltransferase domain DGN16_18945 PF00005 ABC transporter DGN16_18955 PF00534 Glycosyl transferases group 1 DGN16_18955 PF13439 Glycosyltransferase Family 4 DGN16_18965 PF01053 Cys/Met metabolism PLP-dependent enzyme DGN16_18970 PF00571 CBS domain DGN16_18970 PF00291 Pyridoxal-phosphate dependent enzyme DGN16_18990 PF00437 Type II/IV secretion system protein DGN16_18995 PF02798 Glutathione S-transferase, N-terminal domain DGN16_18995 PF14497 Glutathione S-transferase, C-terminal domain DGN16_19010 PF00271 Helicase conserved C-terminal domain DGN16_19010 PF00270 DEAD/DEAH box helicase DGN16_19020 PF00593 TonB dependent receptor DGN16_19020 PF07715 TonB-dependent Receptor Plug Domain DGN16_19030 PF01242 6-pyruvoyl tetrahydropterin synthase DGN16_19065 PF13185 GAF domain DGN16_19075 PF00756 Putative esterase DGN16_19080 PF07715 TonB-dependent Receptor Plug Domain DGN16_19080 PF00593 TonB dependent receptor DGN16_19085 PF13419 Haloacid dehalogenase-like hydrolase DGN16_19090 PF00817 impB/mucB/samB family DGN16_19090 PF11799 impB/mucB/samB family C-terminal domain DGN16_19095 PF07977 FabA-like domain DGN16_19100 PF00109 Beta-ketoacyl synthase, N-terminal domain DGN16_19100 PF02801 Beta-ketoacyl synthase, C-terminal domain DGN16_19110 PF01432 Peptidase family M3 DGN16_19125 PF07731 Multicopper oxidase DGN16_19125 PF00394 Multicopper oxidase DGN16_19125 PF07732 Multicopper oxidase DGN16_19130 PF05275 Copper resistance protein B precursor (CopB) DGN16_19135 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DGN16_19160 PF01380 SIS domain DGN16_19165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGN16_19170 PF00005 ABC transporter DGN16_19175 PF12704 MacB-like periplasmic core domain DGN16_19175 PF02687 FtsX-like permease family DGN16_19205 PF00072 Response regulator receiver domain DGN16_19205 PF02954 Bacterial regulatory protein, Fis family DGN16_19205 PF00158 Sigma-54 interaction domain DGN16_19210 PF00512 His Kinase A (phospho-acceptor) domain DGN16_19210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_19215 PF12804 MobA-like NTP transferase domain DGN16_19215 PF00132 Bacterial transferase hexapeptide (six repeats) DGN16_19215 PF14602 Hexapeptide repeat of succinyl-transferase DGN16_19235 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DGN16_19235 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DGN16_19240 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DGN16_19240 PF02874 ATP synthase alpha/beta family, beta-barrel domain DGN16_19245 PF00231 ATP synthase DGN16_19250 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DGN16_19250 PF00306 ATP synthase alpha/beta chain, C terminal domain DGN16_19250 PF02874 ATP synthase alpha/beta family, beta-barrel domain DGN16_19255 PF00213 ATP synthase delta (OSCP) subunit DGN16_19260 PF00430 ATP synthase B/B' CF(0) DGN16_19265 PF00137 ATP synthase subunit C DGN16_19270 PF00119 ATP synthase A chain DGN16_19290 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGN16_19290 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DGN16_19300 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DGN16_19300 PF00364 Biotin-requiring enzyme DGN16_19300 PF02817 e3 binding domain DGN16_19335 PF03180 NLPA lipoprotein DGN16_19340 PF00528 Binding-protein-dependent transport system inner membrane component DGN16_19345 PF09383 NIL domain DGN16_19345 PF00005 ABC transporter DGN16_19350 PF00892 EamA-like transporter family DGN16_19355 PF04461 Protein of unknown function (DUF520) DGN16_19365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_19365 PF18415 Histidine kinase receptor ArcB trans-membrane domain DGN16_19365 PF01627 Hpt domain DGN16_19365 PF00989 PAS fold DGN16_19365 PF00072 Response regulator receiver domain DGN16_19365 PF00512 His Kinase A (phospho-acceptor) domain DGN16_19395 PF00849 RNA pseudouridylate synthase DGN16_19395 PF01479 S4 domain DGN16_19400 PF05175 Methyltransferase small domain DGN16_19400 PF08468 Methyltransferase small domain N-terminal DGN16_19410 PF07995 Glucose / Sorbosone dehydrogenase DGN16_19420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_19420 PF00512 His Kinase A (phospho-acceptor) domain DGN16_19420 PF00989 PAS fold DGN16_19440 PF00842 Alanine racemase, C-terminal domain DGN16_19440 PF01168 Alanine racemase, N-terminal domain DGN16_19445 PF01266 FAD dependent oxidoreductase DGN16_19450 PF01037 Lrp/AsnC ligand binding domain DGN16_19460 PF01641 SelR domain DGN16_19470 PF01618 MotA/TolQ/ExbB proton channel family DGN16_19475 PF13677 Membrane MotB of proton-channel complex MotA/MotB DGN16_19475 PF00691 OmpA family DGN16_19505 PF01061 ABC-2 type transporter DGN16_19510 PF00005 ABC transporter DGN16_19515 PF00999 Sodium/hydrogen exchanger family DGN16_19525 PF02469 Fasciclin domain DGN16_19530 PF03167 Uracil DNA glycosylase superfamily DGN16_19545 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DGN16_19555 PF03466 LysR substrate binding domain DGN16_19555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN16_19560 PF03358 NADPH-dependent FMN reductase DGN16_19565 PF00248 Aldo/keto reductase family DGN16_19580 PF01431 Peptidase family M13 DGN16_19580 PF05649 Peptidase family M13 DGN16_19595 PF13520 Amino acid permease DGN16_19605 PF04397 LytTr DNA-binding domain DGN16_19605 PF00072 Response regulator receiver domain DGN16_19610 PF00672 HAMP domain DGN16_19610 PF02743 Cache domain DGN16_19610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_19610 PF06580 Histidine kinase DGN16_19635 PF05974 Domain of unknown function (DUF892) DGN16_19640 PF05067 Manganese containing catalase DGN16_19660 PF01739 CheR methyltransferase, SAM binding domain DGN16_19660 PF08448 PAS fold DGN16_19660 PF03705 CheR methyltransferase, all-alpha domain DGN16_19660 PF01339 CheB methylesterase DGN16_19675 PF02954 Bacterial regulatory protein, Fis family DGN16_19675 PF00072 Response regulator receiver domain DGN16_19675 PF00158 Sigma-54 interaction domain DGN16_19690 PF01654 Cytochrome bd terminal oxidase subunit I DGN16_19695 PF02322 Cytochrome bd terminal oxidase subunit II DGN16_19715 PF16363 GDP-mannose 4,6 dehydratase DGN16_19725 PF03275 UDP-galactopyranose mutase DGN16_19735 PF00005 ABC transporter DGN16_19735 PF00664 ABC transporter transmembrane region DGN16_19750 PF08240 Alcohol dehydrogenase GroES-like domain DGN16_19750 PF13823 Alcohol dehydrogenase GroES-associated DGN16_19750 PF00107 Zinc-binding dehydrogenase DGN16_19795 PF00593 TonB dependent receptor DGN16_19795 PF07715 TonB-dependent Receptor Plug Domain DGN16_19810 PF00005 ABC transporter DGN16_19820 PF03466 LysR substrate binding domain DGN16_19820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN16_19825 PF01042 Endoribonuclease L-PSP DGN16_19855 PF03466 LysR substrate binding domain DGN16_19855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN16_19860 PF02525 Flavodoxin-like fold DGN16_19890 PF01740 STAS domain DGN16_19890 PF00916 Sulfate permease family DGN16_19900 PF00557 Metallopeptidase family M24 DGN16_19955 PF01609 Transposase DDE domain DGN16_19955 PF05598 Transposase domain (DUF772) DGN16_20015 PF00589 Phage integrase family DGN16_20015 PF13356 Arm DNA-binding domain DGN16_20030 PF04542 Sigma-70 region 2 DGN16_20030 PF04546 Sigma-70, non-essential region DGN16_20030 PF04545 Sigma-70, region 4 DGN16_20030 PF03979 Sigma-70 factor, region 1.1 DGN16_20030 PF04539 Sigma-70 region 3 DGN16_20030 PF00140 Sigma-70 factor, region 1.2 DGN16_20035 PF02580 D-Tyr-tRNA(Tyr) deacylase DGN16_20040 PF03279 Bacterial lipid A biosynthesis acyltransferase DGN16_20060 PF00925 GTP cyclohydrolase II DGN16_20080 PF00535 Glycosyl transferase family 2 DGN16_20095 PF01189 16S rRNA methyltransferase RsmB/F DGN16_20095 PF01029 NusB family DGN16_20100 PF02911 Formyl transferase, C-terminal domain DGN16_20100 PF00551 Formyl transferase DGN16_20105 PF01327 Polypeptide deformylase DGN16_20110 PF01476 LysM domain DGN16_20115 PF17782 DprA winged helix domain DGN16_20115 PF02481 DNA recombination-mediator protein A DGN16_20120 PF04361 Protein of unknown function (DUF494) DGN16_20125 PF00114 Pilin (bacterial filament) DGN16_20125 PF07963 Prokaryotic N-terminal methylation motif DGN16_20135 PF01131 DNA topoisomerase DGN16_20135 PF01751 Toprim domain DGN16_20135 PF13368 Topoisomerase C-terminal repeat DGN16_20140 PF01300 Telomere recombination DGN16_20170 PF01343 Peptidase family S49 DGN16_20175 PF01554 MatE DGN16_20195 PF00271 Helicase conserved C-terminal domain DGN16_20195 PF18074 Primosomal protein N C-terminal domain DGN16_20195 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DGN16_20195 PF00270 DEAD/DEAH box helicase DGN16_20195 PF17764 3′ DNA-binding domain (3′BD) DGN16_20200 PF00043 Glutathione S-transferase, C-terminal domain DGN16_20200 PF13417 Glutathione S-transferase, N-terminal domain DGN16_20215 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGN16_20225 PF04545 Sigma-70, region 4 DGN16_20225 PF04542 Sigma-70 region 2 DGN16_20230 PF03167 Uracil DNA glycosylase superfamily DGN16_20235 PF00072 Response regulator receiver domain DGN16_20240 PF18075 FtsX extracellular domain DGN16_20245 PF00005 ABC transporter DGN16_20250 PF00270 DEAD/DEAH box helicase DGN16_20250 PF00271 Helicase conserved C-terminal domain DGN16_20250 PF12300 ATP-dependent RNA helicase RhlB DGN16_20255 PF00085 Thioredoxin DGN16_20260 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DGN16_20260 PF07497 Rho termination factor, RNA-binding domain DGN16_20260 PF07498 Rho termination factor, N-terminal domain DGN16_20265 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) DGN16_20270 PF03466 LysR substrate binding domain DGN16_20270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN16_20280 PF03971 Monomeric isocitrate dehydrogenase DGN16_20290 PF01476 LysM domain DGN16_20290 PF04972 BON domain DGN16_20295 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term DGN16_20295 PF14489 QueF-like protein DGN16_20300 PF07687 Peptidase dimerisation domain DGN16_20300 PF01546 Peptidase family M20/M25/M40 DGN16_20305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGN16_20310 PF00873 AcrB/AcrD/AcrF family DGN16_20315 PF00873 AcrB/AcrD/AcrF family DGN16_20330 PF07063 Domain of unknown function (DUF1338) DGN16_20370 PF01427 D-ala-D-ala dipeptidase DGN16_20375 PF01510 N-acetylmuramoyl-L-alanine amidase DGN16_20385 PF13378 Enolase C-terminal domain-like DGN16_20385 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DGN16_20395 PF13520 Amino acid permease DGN16_20420 PF00872 Transposase, Mutator family DGN16_20430 PF07995 Glucose / Sorbosone dehydrogenase DGN16_20435 PF14310 Fibronectin type III-like domain DGN16_20435 PF00933 Glycosyl hydrolase family 3 N terminal domain DGN16_20435 PF01915 Glycosyl hydrolase family 3 C-terminal domain DGN16_20440 PF02152 Dihydroneopterin aldolase DGN16_20445 PF00814 Glycoprotease family DGN16_20450 PF01165 Ribosomal protein S21 DGN16_20455 PF09424 Yqey-like protein DGN16_20465 PF03631 Virulence factor BrkB DGN16_20470 PF10410 DnaB-helicase binding domain of primase DGN16_20470 PF08278 DNA primase DnaG DnaB-binding DGN16_20470 PF08275 DNA primase catalytic core, N-terminal domain DGN16_20470 PF01807 CHC2 zinc finger DGN16_20475 PF13593 SBF-like CPA transporter family (DUF4137) DGN16_20485 PF01040 UbiA prenyltransferase family DGN16_20510 PF00510 Cytochrome c oxidase subunit III DGN16_20515 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 DGN16_20525 PF00115 Cytochrome C and Quinol oxidase polypeptide I DGN16_20530 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DGN16_20530 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DGN16_20540 PF00171 Aldehyde dehydrogenase family DGN16_20540 PF01619 Proline dehydrogenase DGN16_20540 PF14850 DNA-binding domain of Proline dehydrogenase DGN16_20540 PF18327 Proline utilization A proline dehydrogenase N-terminal domain DGN16_20575 PF00579 tRNA synthetases class I (W and Y) DGN16_20580 PF04225 Opacity-associated protein A LysM-like domain DGN16_20580 PF01551 Peptidase family M23 DGN16_20585 PF03702 Anhydro-N-acetylmuramic acid kinase DGN16_20595 PF07690 Major Facilitator Superfamily DGN16_20600 PF03372 Endonuclease/Exonuclease/phosphatase family DGN16_20605 PF00156 Phosphoribosyl transferase domain DGN16_20615 PF13614 AAA domain DGN16_20620 PF17762 HTH domain found in ParB protein DGN16_20620 PF02195 ParB-like nuclease domain DGN16_20635 PF01370 NAD dependent epimerase/dehydratase family DGN16_20640 PF00535 Glycosyl transferase family 2 DGN16_20655 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DGN16_20655 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DGN16_20655 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DGN16_20655 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DGN16_20660 PF00692 dUTPase DGN16_20665 PF04127 DNA / pantothenate metabolism flavoprotein DGN16_20665 PF02441 Flavoprotein DGN16_20670 PF04002 RadC-like JAB domain DGN16_20675 PF03485 Arginyl tRNA synthetase N terminal domain DGN16_20675 PF05746 DALR anticodon binding domain DGN16_20675 PF00750 tRNA synthetases class I (R) DGN16_20690 PF00106 short chain dehydrogenase DGN16_20695 PF01757 Acyltransferase family DGN16_20700 PF03033 Glycosyltransferase family 28 N-terminal domain DGN16_20715 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DGN16_20715 PF17944 Arginine decarboxylase C-terminal helical extension DGN16_20715 PF17810 Arginine decarboxylase helical bundle domain DGN16_20720 PF17284 Spermidine synthase tetramerisation domain DGN16_20745 PF00963 Cohesin domain DGN16_20745 PF00754 F5/8 type C domain DGN16_20745 PF00041 Fibronectin type III domain DGN16_20745 PF02838 Glycosyl hydrolase family 20, domain 2 DGN16_20745 PF07555 beta-N-acetylglucosaminidase DGN16_20755 PF00543 Nitrogen regulatory protein P-II DGN16_20760 PF04380 Membrane fusogenic activity DGN16_20765 PF01078 Magnesium chelatase, subunit ChlI DGN16_20765 PF13335 Magnesium chelatase, subunit ChlI C-terminal DGN16_20780 PF00563 EAL domain DGN16_20780 PF12792 CSS motif domain associated with EAL DGN16_20785 PF00487 Fatty acid desaturase DGN16_20790 PF00175 Oxidoreductase NAD-binding domain DGN16_20790 PF00970 Oxidoreductase FAD-binding domain DGN16_20790 PF00111 2Fe-2S iron-sulfur cluster binding domain DGN16_20795 PF00440 Bacterial regulatory proteins, tetR family DGN16_20810 PF05598 Transposase domain (DUF772) DGN16_20810 PF01609 Transposase DDE domain DGN16_20820 PF01139 tRNA-splicing ligase RtcB DGN16_20855 PF08338 Domain of unknown function (DUF1731) DGN16_20855 PF01370 NAD dependent epimerase/dehydratase family DGN16_20860 PF00072 Response regulator receiver domain DGN16_20860 PF00486 Transcriptional regulatory protein, C terminal DGN16_20865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_20865 PF08521 Two-component sensor kinase N-terminal DGN16_20865 PF00512 His Kinase A (phospho-acceptor) domain DGN16_20890 PF00595 PDZ domain DGN16_20910 PF01594 AI-2E family transporter DGN16_20915 PF13419 Haloacid dehalogenase-like hydrolase DGN16_20920 PF00883 Cytosol aminopeptidase family, catalytic domain DGN16_20920 PF02789 Cytosol aminopeptidase family, N-terminal domain DGN16_20930 PF00872 Transposase, Mutator family DGN16_20940 PF00199 Catalase DGN16_20955 PF00196 Bacterial regulatory proteins, luxR family DGN16_20955 PF00072 Response regulator receiver domain DGN16_20960 PF07730 Histidine kinase DGN16_20965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGN16_20970 PF00005 ABC transporter DGN16_20990 PF00892 EamA-like transporter family DGN16_20995 PF00892 EamA-like transporter family DGN16_21015 PF00753 Metallo-beta-lactamase superfamily DGN16_21020 PF00579 tRNA synthetases class I (W and Y) DGN16_21025 PF05532 CsbD-like DGN16_21040 PF00491 Arginase family DGN16_21065 PF02223 Thymidylate kinase DGN16_21085 PF03309 Type III pantothenate kinase DGN16_21090 PF02237 Biotin protein ligase C terminal domain DGN16_21090 PF08279 HTH domain DGN16_21090 PF03099 Biotin/lipoate A/B protein ligase family DGN16_21105 PF06167 Glucose-regulated metallo-peptidase M90 DGN16_21120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_21125 PF00486 Transcriptional regulatory protein, C terminal DGN16_21125 PF00072 Response regulator receiver domain DGN16_21135 PF01207 Dihydrouridine synthase (Dus) DGN16_21155 PF00199 Catalase DGN16_21155 PF06628 Catalase-related immune-responsive DGN16_21165 PF06733 DEAD_2 DGN16_21165 PF13307 Helicase C-terminal domain DGN16_21180 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DGN16_21180 PF01488 Shikimate / quinate 5-dehydrogenase DGN16_21180 PF08501 Shikimate dehydrogenase substrate binding domain DGN16_21195 PF00258 Flavodoxin DGN16_21195 PF00667 FAD binding domain DGN16_21195 PF00175 Oxidoreductase NAD-binding domain DGN16_21205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN16_21205 PF03466 LysR substrate binding domain DGN16_21220 PF00490 Delta-aminolevulinic acid dehydratase DGN16_21245 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region DGN16_21245 PF00326 Prolyl oligopeptidase family DGN16_21250 PF00043 Glutathione S-transferase, C-terminal domain DGN16_21250 PF02798 Glutathione S-transferase, N-terminal domain DGN16_21275 PF04820 Tryptophan halogenase DGN16_21290 PF00005 ABC transporter DGN16_21300 PF01381 Helix-turn-helix DGN16_21310 PF01229 Glycosyl hydrolases family 39 DGN16_21315 PF02583 Metal-sensitive transcriptional repressor DGN16_21320 PF01545 Cation efflux family DGN16_21330 PF07715 TonB-dependent Receptor Plug Domain DGN16_21330 PF00593 TonB dependent receptor DGN16_21340 PF12833 Helix-turn-helix domain DGN16_21340 PF01965 DJ-1/PfpI family DGN16_21345 PF01383 CpcD/allophycocyanin linker domain DGN16_21345 PF00175 Oxidoreductase NAD-binding domain DGN16_21350 PF00005 ABC transporter DGN16_21355 PF01061 ABC-2 type transporter DGN16_21360 PF02558 Ketopantoate reductase PanE/ApbA DGN16_21360 PF08546 Ketopantoate reductase PanE/ApbA C terminal DGN16_21390 PF00268 Ribonucleotide reductase, small chain DGN16_21400 PF03477 ATP cone domain DGN16_21400 PF02867 Ribonucleotide reductase, barrel domain DGN16_21400 PF00317 Ribonucleotide reductase, all-alpha domain DGN16_21410 PF00583 Acetyltransferase (GNAT) family DGN16_21410 PF13380 CoA binding domain DGN16_21410 PF13607 Succinyl-CoA ligase like flavodoxin domain DGN16_21415 PF03448 MgtE intracellular N domain DGN16_21415 PF00571 CBS domain DGN16_21415 PF01769 Divalent cation transporter DGN16_21425 PF00194 Eukaryotic-type carbonic anhydrase DGN16_21435 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DGN16_21435 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DGN16_21440 PF00723 Glycosyl hydrolases family 15 DGN16_21455 PF05166 YcgL domain DGN16_21460 PF00109 Beta-ketoacyl synthase, N-terminal domain DGN16_21460 PF02801 Beta-ketoacyl synthase, C-terminal domain DGN16_21470 PF00535 Glycosyl transferase family 2 DGN16_21515 PF07977 FabA-like domain DGN16_21520 PF01553 Acyltransferase DGN16_21530 PF00550 Phosphopantetheine attachment site DGN16_21535 PF04820 Tryptophan halogenase DGN16_21560 PF00326 Prolyl oligopeptidase family DGN16_21560 PF07676 WD40-like Beta Propeller Repeat DGN16_21585 PF01218 Coproporphyrinogen III oxidase DGN16_21595 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DGN16_21595 PF01612 3'-5' exonuclease DGN16_21595 PF01367 5'-3' exonuclease, C-terminal SAM fold DGN16_21595 PF00476 DNA polymerase family A DGN16_21605 PF06812 ImpA, N-terminal, type VI secretion system DGN16_21625 PF00069 Protein kinase domain DGN16_21640 PF06761 Intracellular multiplication and human macrophage-killing DGN16_21640 PF14331 ImcF-related N-terminal domain DGN16_21640 PF06744 Type VI secretion protein IcmF C-terminal DGN16_21650 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE DGN16_21665 PF04717 Type VI secretion system, phage-baseplate injector DGN16_21680 PF03793 PASTA domain DGN16_21680 PF00069 Protein kinase domain DGN16_21690 PF04542 Sigma-70 region 2 DGN16_21690 PF08281 Sigma-70, region 4 DGN16_21710 PF00328 Histidine phosphatase superfamily (branch 2) DGN16_21740 PF05598 Transposase domain (DUF772) DGN16_21740 PF01609 Transposase DDE domain DGN16_21750 PF07724 AAA domain (Cdc48 subfamily) DGN16_21750 PF10431 C-terminal, D2-small domain, of ClpB protein DGN16_21750 PF00004 ATPase family associated with various cellular activities (AAA) DGN16_21750 PF17871 AAA lid domain DGN16_21760 PF05947 Type VI secretion system, TssF DGN16_21765 PF04965 Gene 25-like lysozyme DGN16_21770 PF07024 ImpE protein DGN16_21775 PF05638 Type VI secretion system effector, Hcp DGN16_21780 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath DGN16_21785 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 DGN16_21800 PF14602 Hexapeptide repeat of succinyl-transferase DGN16_21800 PF12464 Maltose acetyltransferase DGN16_21810 PF00580 UvrD/REP helicase N-terminal domain DGN16_21810 PF13361 UvrD-like helicase C-terminal domain DGN16_21820 PF13091 PLD-like domain DGN16_21820 PF13396 Phospholipase_D-nuclease N-terminal DGN16_21825 PF03466 LysR substrate binding domain DGN16_21825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN16_21830 PF03737 Aldolase/RraA DGN16_21835 PF04303 PrpF protein DGN16_21850 PF00471 Ribosomal protein L33 DGN16_21855 PF00830 Ribosomal L28 family DGN16_21860 PF00873 AcrB/AcrD/AcrF family DGN16_21870 PF13533 Biotin-lipoyl like DGN16_21890 PF02527 rRNA small subunit methyltransferase G DGN16_21895 PF09423 PhoD-like phosphatase DGN16_21895 PF16655 PhoD-like phosphatase, N-terminal domain DGN16_21900 PF09423 PhoD-like phosphatase DGN16_21900 PF16655 PhoD-like phosphatase, N-terminal domain DGN16_21905 PF01648 4'-phosphopantetheinyl transferase superfamily DGN16_21910 PF04226 Transglycosylase associated protein DGN16_21920 PF03372 Endonuclease/Exonuclease/phosphatase family DGN16_21925 PF00480 ROK family DGN16_21935 PF09312 SurA N-terminal domain DGN16_21935 PF00639 PPIC-type PPIASE domain DGN16_21950 PF00474 Sodium:solute symporter family DGN16_21955 PF04341 Protein of unknown function, DUF485 DGN16_21965 PF13193 AMP-binding enzyme C-terminal domain DGN16_21965 PF16177 Acetyl-coenzyme A synthetase N-terminus DGN16_21965 PF00501 AMP-binding enzyme DGN16_21970 PF00196 Bacterial regulatory proteins, luxR family DGN16_21970 PF00072 Response regulator receiver domain DGN16_22005 PF00248 Aldo/keto reductase family DGN16_22020 PF01557 Fumarylacetoacetate (FAA) hydrolase family DGN16_22025 PF13378 Enolase C-terminal domain-like DGN16_22025 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DGN16_22030 PF05336 L-rhamnose mutarotase DGN16_22035 PF07690 Major Facilitator Superfamily DGN16_22040 PF09339 IclR helix-turn-helix domain DGN16_22040 PF01614 Bacterial transcriptional regulator DGN16_22045 PF02659 Putative manganese efflux pump DGN16_22050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_22050 PF00512 His Kinase A (phospho-acceptor) domain DGN16_22065 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain DGN16_22065 PF06165 Glycosyltransferase family 36 DGN16_22085 PF01011 PQQ enzyme repeat DGN16_22085 PF13360 PQQ-like domain DGN16_22085 PF13570 PQQ-like domain DGN16_22110 PF04357 TamB, inner membrane protein subunit of TAM complex DGN16_22115 PF17243 POTRA domain TamA domain 1 DGN16_22115 PF01103 Surface antigen DGN16_22125 PF05598 Transposase domain (DUF772) DGN16_22125 PF01609 Transposase DDE domain DGN16_22130 PF05598 Transposase domain (DUF772) DGN16_22130 PF01609 Transposase DDE domain DGN16_22135 PF05598 Transposase domain (DUF772) DGN16_22135 PF01609 Transposase DDE domain DGN16_22160 PF05746 DALR anticodon binding domain DGN16_22160 PF02092 Glycyl-tRNA synthetase beta subunit DGN16_22165 PF02091 Glycyl-tRNA synthetase alpha subunit DGN16_22170 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DGN16_22170 PF00437 Type II/IV secretion system protein DGN16_22190 PF00117 Glutamine amidotransferase class-I DGN16_22190 PF00958 GMP synthase C terminal domain DGN16_22200 PF00902 Sec-independent protein translocase protein (TatC) DGN16_22205 PF02416 mttA/Hcf106 family DGN16_22210 PF02416 mttA/Hcf106 family DGN16_22220 PF00762 Ferrochelatase DGN16_22225 PF12697 Alpha/beta hydrolase family DGN16_22240 PF04381 Putative exonuclease, RdgC DGN16_22245 PF01171 PP-loop family DGN16_22260 PF00356 Bacterial regulatory proteins, lacI family DGN16_22265 PF07488 Glycosyl hydrolase family 67 middle domain DGN16_22265 PF03648 Glycosyl hydrolase family 67 N-terminus DGN16_22265 PF07477 Glycosyl hydrolase family 67 C-terminus DGN16_22275 PF13378 Enolase C-terminal domain-like DGN16_22275 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DGN16_22280 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain DGN16_22280 PF04616 Glycosyl hydrolases family 43 DGN16_22285 PF07691 PA14 domain DGN16_22285 PF14310 Fibronectin type III-like domain DGN16_22285 PF00933 Glycosyl hydrolase family 3 N terminal domain DGN16_22285 PF01915 Glycosyl hydrolase family 3 C-terminal domain DGN16_22290 PF08125 Mannitol dehydrogenase C-terminal domain DGN16_22290 PF01232 Mannitol dehydrogenase Rossmann domain DGN16_22325 PF00171 Aldehyde dehydrogenase family DGN16_22350 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DGN16_22350 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DGN16_22370 PF08450 SMP-30/Gluconolactonase/LRE-like region DGN16_22375 PF00331 Glycosyl hydrolase family 10 DGN16_22380 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DGN16_22380 PF00703 Glycosyl hydrolases family 2 DGN16_22380 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 DGN16_22380 PF16355 Domain of unknown function (DUF4982) DGN16_22380 PF02837 Glycosyl hydrolases family 2, sugar binding domain DGN16_22385 PF02614 Glucuronate isomerase DGN16_22400 PF00553 Cellulose binding domain DGN16_22400 PF00331 Glycosyl hydrolase family 10 DGN16_22400 PF03422 Carbohydrate binding module (family 6) DGN16_22420 PF04616 Glycosyl hydrolases family 43 DGN16_22450 PF00109 Beta-ketoacyl synthase, N-terminal domain DGN16_22450 PF16197 Ketoacyl-synthetase C-terminal extension DGN16_22450 PF00107 Zinc-binding dehydrogenase DGN16_22450 PF08240 Alcohol dehydrogenase GroES-like domain DGN16_22450 PF14765 Polyketide synthase dehydratase DGN16_22450 PF00698 Acyl transferase domain DGN16_22450 PF00550 Phosphopantetheine attachment site DGN16_22450 PF08659 KR domain DGN16_22450 PF02801 Beta-ketoacyl synthase, C-terminal domain DGN16_22455 PF01553 Acyltransferase DGN16_22470 PF00356 Bacterial regulatory proteins, lacI family DGN16_22485 PF04820 Tryptophan halogenase DGN16_22490 PF05598 Transposase domain (DUF772) DGN16_22490 PF01609 Transposase DDE domain DGN16_22495 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DGN16_22500 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) DGN16_22505 PF04337 Protein of unknown function, DUF480 DGN16_22525 PF13302 Acetyltransferase (GNAT) domain DGN16_22530 PF00580 UvrD/REP helicase N-terminal domain DGN16_22530 PF13361 UvrD-like helicase C-terminal domain DGN16_22535 PF00265 Thymidine kinase DGN16_22540 PF00360 Phytochrome region DGN16_22540 PF08446 PAS fold DGN16_22540 PF01590 GAF domain DGN16_22540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGN16_22540 PF00512 His Kinase A (phospho-acceptor) domain DGN16_22545 PF04349 Periplasmic glucan biosynthesis protein, MdoG DGN16_22555 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DGN16_22555 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DGN16_22555 PF06827 Zinc finger found in FPG and IleRS DGN16_22585 PF03594 Benzoate membrane transport protein DGN16_22590 PF01590 GAF domain DGN16_22590 PF08446 PAS fold DGN16_22590 PF13426 PAS domain DGN16_22590 PF00360 Phytochrome region DGN16_22595 PF01126 Heme oxygenase DGN16_22600 PF07690 Major Facilitator Superfamily DGN16_22610 PF01263 Aldose 1-epimerase DGN16_22620 PF02810 SEC-C motif DGN16_22625 PF01925 Sulfite exporter TauE/SafE DGN16_22650 PF01227 GTP cyclohydrolase I DGN16_22660 PF07869 Protein of unknown function (DUF1656) DGN16_22665 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGN16_22665 PF00529 HlyD membrane-fusion protein of T1SS DGN16_22670 PF02321 Outer membrane efflux protein DGN16_22675 PF04632 Fusaric acid resistance protein family DGN16_22680 PF00083 Sugar (and other) transporter DGN16_22690 PF03466 LysR substrate binding domain DGN16_22690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGN16_22695 PF00106 short chain dehydrogenase DGN16_22705 PF13091 PLD-like domain DGN16_22705 PF13396 Phospholipase_D-nuclease N-terminal DGN16_22740 PF00872 Transposase, Mutator family DGN16_22765 PF00849 RNA pseudouridylate synthase DGN16_22790 PF01609 Transposase DDE domain DGN16_22790 PF05598 Transposase domain (DUF772) DGN16_22810 PF05598 Transposase domain (DUF772) DGN16_22810 PF01609 Transposase DDE domain DGN16_22820 PF01609 Transposase DDE domain DGN16_22820 PF05598 Transposase domain (DUF772) DGN16_22885 PF13538 UvrD-like helicase C-terminal domain DGN16_22890 PF12705 PD-(D/E)XK nuclease superfamily DGN16_22890 PF00580 UvrD/REP helicase N-terminal domain DGN16_22890 PF13361 UvrD-like helicase C-terminal domain DGN16_22895 PF17946 RecC C-terminal domain DGN16_22930 PF00005 ABC transporter DGN16_22935 PF02405 Permease MlaE DGN16_22940 PF02470 MlaD protein DGN16_22945 PF05494 MlaC protein DGN16_22955 PF04333 MlaA lipoprotein DGN16_22965 PF00255 Glutathione peroxidase DGN16_22975 PF02646 RmuC family DGN16_22995 PF00043 Glutathione S-transferase, C-terminal domain DGN16_22995 PF13417 Glutathione S-transferase, N-terminal domain DGN16_23035 PF00239 Resolvase, N terminal domain DGN16_23035 PF02796 Helix-turn-helix domain of resolvase DGN16_23105 PF08751 TrwC relaxase DGN16_23105 PF07057 DNA helicase TraI DGN16_23105 PF18272 single-stranded DNA binding TraI N-terminal subdomain DGN16_23105 PF18340 DNA relaxase TraI 2B/2B-like domain DGN16_23125 PF02796 Helix-turn-helix domain of resolvase DGN16_23125 PF00239 Resolvase, N terminal domain DGN16_23130 PF08463 EcoEI R protein C-terminal DGN16_23130 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) DGN16_23130 PF04851 Type III restriction enzyme, res subunit DGN16_23130 PF00271 Helicase conserved C-terminal domain DGN16_23160 PF13091 PLD-like domain DGN16_23170 PF01464 Transglycosylase SLT domain DGN16_23175 PF00437 Type II/IV secretion system protein DGN16_23180 PF03743 Bacterial conjugation TrbI-like protein DGN16_23185 PF03524 Conjugal transfer protein DGN16_23235 PF00872 Transposase, Mutator family DGN16_23255 PF06616 BsuBI/PstI restriction endonuclease domain DGN16_23255 PF17728 BsuBI/PstI restriction endonuclease HTH domain DGN16_23260 PF13614 AAA domain DGN16_23280 PF07971 Glycosyl hydrolase family 92 DGN16_23280 PF17678 Glycosyl hydrolase family 92 N-terminal domain DGN16_23290 PF10947 Protein of unknown function (DUF2628) DGN16_23305 PF02595 Glycerate kinase family DGN16_23310 PF07690 Major Facilitator Superfamily DGN16_23325 PF17785 PUA-like domain DGN16_23325 PF10672 S-adenosylmethionine-dependent methyltransferase DGN16_23335 PF03741 Integral membrane protein TerC family DGN16_23340 PF01694 Rhomboid family DGN16_23345 PF03009 Glycerophosphoryl diester phosphodiesterase family DGN16_23355 PF01609 Transposase DDE domain DGN16_23355 PF05598 Transposase domain (DUF772) DGN16_23360 PF01569 PAP2 superfamily DGN16_23365 PF10396 GTP-binding protein TrmE N-terminus DGN16_23365 PF12631 MnmE helical domain DGN16_23365 PF01926 50S ribosome-binding GTPase DGN16_23375 PF02096 60Kd inner membrane protein DGN16_23375 PF14849 YidC periplasmic domain DGN16_23380 PF00825 Ribonuclease P DGN16_23385 PF00468 Ribosomal protein L34 DGN16_23475 PF03421 YopJ Serine/Threonine acetyltransferase DGN16_23480 PF00872 Transposase, Mutator family DGN16_23510 PF00239 Resolvase, N terminal domain DGN16_23510 PF02796 Helix-turn-helix domain of resolvase DGN16_23520 PF01850 PIN domain DGN16_23575 PF03743 Bacterial conjugation TrbI-like protein DGN16_23630 PF02534 Type IV secretory system Conjugative DNA transfer DGN16_23700 PF03377 TAL effector repeat DGN16_23735 PF06067 Domain of unknown function (DUF932) DGN16_23760 PF18495 Antitoxin VbhA DGN16_23770 PF02661 Fic/DOC family DGN16_23770 PF17841 BID domain of Bartonella effector protein (Bep) DGN16_23780 PF00872 Transposase, Mutator family DGN16_23785 PF00872 Transposase, Mutator family DGN16_23815 PF00872 Transposase, Mutator family DGN16_23820 PF02796 Helix-turn-helix domain of resolvase DGN16_23820 PF00239 Resolvase, N terminal domain DGN16_23830 PF01555 DNA methylase DGN16_23835 PF09571 XcyI restriction endonuclease DGN16_23895 PF13406 Transglycosylase SLT domain DGN16_23925 PF11740 Plasmid replication region DNA-binding N-term DGN16_23965 PF03377 TAL effector repeat