locus-tag class description FPK90_00010 PF08299 Bacterial dnaA protein helix-turn-helix FPK90_00010 PF11638 DnaA N-terminal domain FPK90_00010 PF00308 Bacterial dnaA protein FPK90_00015 PF02768 DNA polymerase III beta subunit, C-terminal domain FPK90_00015 PF00712 DNA polymerase III beta subunit, N-terminal domain FPK90_00015 PF02767 DNA polymerase III beta subunit, central domain FPK90_00020 PF02463 RecF/RecN/SMC N terminal domain FPK90_00025 PF00204 DNA gyrase B FPK90_00025 PF00986 DNA gyrase B subunit, carboxyl terminus FPK90_00025 PF18053 DNA gyrase B subunit insert domain FPK90_00025 PF01751 Toprim domain FPK90_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_00035 PF01435 Peptidase family M48 FPK90_00045 PF03544 Gram-negative bacterial TonB protein C-terminal FPK90_00050 PF01618 MotA/TolQ/ExbB proton channel family FPK90_00055 PF02472 Biopolymer transport protein ExbD/TolR FPK90_00060 PF02472 Biopolymer transport protein ExbD/TolR FPK90_00065 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FPK90_00075 PF13091 PLD-like domain FPK90_00075 PF13396 Phospholipase_D-nuclease N-terminal FPK90_00090 PF04055 Radical SAM superfamily FPK90_00115 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FPK90_00115 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FPK90_00120 PF13180 PDZ domain FPK90_00120 PF03572 Peptidase family S41 FPK90_00125 PF01551 Peptidase family M23 FPK90_00135 PF04389 Peptidase family M28 FPK90_00145 PF00150 Cellulase (glycosyl hydrolase family 5) FPK90_00155 PF00150 Cellulase (glycosyl hydrolase family 5) FPK90_00160 PF00150 Cellulase (glycosyl hydrolase family 5) FPK90_00170 PF08240 Alcohol dehydrogenase GroES-like domain FPK90_00170 PF00107 Zinc-binding dehydrogenase FPK90_00180 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FPK90_00180 PF07992 Pyridine nucleotide-disulphide oxidoreductase FPK90_00185 PF01493 GXGXG motif FPK90_00185 PF00310 Glutamine amidotransferases class-II FPK90_00185 PF01645 Conserved region in glutamate synthase FPK90_00185 PF04898 Glutamate synthase central domain FPK90_00215 PF03466 LysR substrate binding domain FPK90_00215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FPK90_00235 PF02397 Bacterial sugar transferase FPK90_00240 PF02350 UDP-N-acetylglucosamine 2-epimerase FPK90_00250 PF03808 Glycosyl transferase WecB/TagA/CpsF family FPK90_00255 PF00534 Glycosyl transferases group 1 FPK90_00255 PF13439 Glycosyltransferase Family 4 FPK90_00275 PF13537 Glutamine amidotransferase domain FPK90_00275 PF00733 Asparagine synthase FPK90_00290 PF16363 GDP-mannose 4,6 dehydratase FPK90_00305 PF00664 ABC transporter transmembrane region FPK90_00305 PF00005 ABC transporter FPK90_00320 PF13537 Glutamine amidotransferase domain FPK90_00320 PF00733 Asparagine synthase FPK90_00340 PF00685 Sulfotransferase domain FPK90_00430 PF00271 Helicase conserved C-terminal domain FPK90_00430 PF09369 Domain of unknown function (DUF1998) FPK90_00430 PF00270 DEAD/DEAH box helicase FPK90_00435 PF03006 Haemolysin-III related FPK90_00465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FPK90_00465 PF03466 LysR substrate binding domain FPK90_00485 PF02525 Flavodoxin-like fold FPK90_00495 PF05532 CsbD-like FPK90_00515 PF01447 Thermolysin metallopeptidase, catalytic domain FPK90_00515 PF02868 Thermolysin metallopeptidase, alpha-helical domain FPK90_00515 PF16485 Protealysin propeptide FPK90_00525 PF00293 NUDIX domain FPK90_00525 PF13344 Haloacid dehalogenase-like hydrolase FPK90_00540 PF00085 Thioredoxin FPK90_00550 PF00083 Sugar (and other) transporter FPK90_00550 PF08946 Osmosensory transporter coiled coil FPK90_00590 PF07726 ATPase family associated with various cellular activities (AAA) FPK90_00590 PF17863 AAA lid domain FPK90_00620 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain FPK90_00625 PF00155 Aminotransferase class I and II FPK90_00630 PF07715 TonB-dependent Receptor Plug Domain FPK90_00630 PF00593 TonB dependent receptor FPK90_00640 PF07883 Cupin domain FPK90_00645 PF00171 Aldehyde dehydrogenase family FPK90_00665 PF02735 Ku70/Ku80 beta-barrel domain FPK90_00670 PF01070 FMN-dependent dehydrogenase FPK90_00680 PF00144 Beta-lactamase FPK90_00685 PF07730 Histidine kinase FPK90_00690 PF00072 Response regulator receiver domain FPK90_00690 PF00196 Bacterial regulatory proteins, luxR family FPK90_00710 PF18500 CadC C-terminal domain 1 FPK90_00710 PF00486 Transcriptional regulatory protein, C terminal FPK90_00715 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase FPK90_00715 PF12241 Trans-2-enoyl-CoA reductase catalytic region FPK90_00715 PF07055 Enoyl reductase FAD binding domain FPK90_00720 PF00294 pfkB family carbohydrate kinase FPK90_00750 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FPK90_00800 PF00128 Alpha amylase, catalytic domain FPK90_00800 PF11896 Domain of unknown function (DUF3416) FPK90_00805 PF00128 Alpha amylase, catalytic domain FPK90_00805 PF16657 Maltogenic Amylase, C-terminal domain FPK90_00810 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FPK90_00810 PF02806 Alpha amylase, C-terminal all-beta domain FPK90_00810 PF00128 Alpha amylase, catalytic domain FPK90_00820 PF00248 Aldo/keto reductase family FPK90_00825 PF00135 Carboxylesterase family FPK90_00830 PF13472 GDSL-like Lipase/Acylhydrolase family FPK90_00830 PF07859 alpha/beta hydrolase fold FPK90_00840 PF03480 Bacterial extracellular solute-binding protein, family 7 FPK90_00850 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FPK90_00855 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain FPK90_00855 PF04616 Glycosyl hydrolases family 43 FPK90_00860 PF00356 Bacterial regulatory proteins, lacI family FPK90_00880 PF04962 KduI/IolB family FPK90_00895 PF00657 GDSL-like Lipase/Acylhydrolase FPK90_00910 PF00351 Biopterin-dependent aromatic amino acid hydroxylase FPK90_00915 PF01037 Lrp/AsnC ligand binding domain FPK90_00920 PF00593 TonB dependent receptor FPK90_00920 PF07715 TonB-dependent Receptor Plug Domain FPK90_00920 PF07660 Secretin and TonB N terminus short domain FPK90_00925 PF01734 Patatin-like phospholipase FPK90_00935 PF00005 ABC transporter FPK90_00950 PF00005 ABC transporter FPK90_00955 PF00528 Binding-protein-dependent transport system inner membrane component FPK90_00965 PF03781 Sulfatase-modifying factor enzyme 1 FPK90_00965 PF12867 DinB superfamily FPK90_00985 PF07804 HipA-like C-terminal domain FPK90_00985 PF13657 HipA N-terminal domain FPK90_00990 PF01381 Helix-turn-helix FPK90_01015 PF01883 Iron-sulfur cluster assembly protein FPK90_01015 PF10609 NUBPL iron-transfer P-loop NTPase FPK90_01030 PF13091 PLD-like domain FPK90_01035 PF03061 Thioesterase superfamily FPK90_01065 PF08240 Alcohol dehydrogenase GroES-like domain FPK90_01065 PF00107 Zinc-binding dehydrogenase FPK90_01075 PF02673 Bacitracin resistance protein BacA FPK90_01085 PF03951 Glutamine synthetase, beta-Grasp domain FPK90_01085 PF00120 Glutamine synthetase, catalytic domain FPK90_01090 PF00543 Nitrogen regulatory protein P-II FPK90_01095 PF00909 Ammonium Transporter Family FPK90_01100 PF00512 His Kinase A (phospho-acceptor) domain FPK90_01100 PF00989 PAS fold FPK90_01100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_01105 PF00158 Sigma-54 interaction domain FPK90_01105 PF02954 Bacterial regulatory protein, Fis family FPK90_01105 PF00072 Response regulator receiver domain FPK90_01110 PF00080 Copper/zinc superoxide dismutase (SODC) FPK90_01115 PF00080 Copper/zinc superoxide dismutase (SODC) FPK90_01125 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FPK90_01135 PF02803 Thiolase, C-terminal domain FPK90_01135 PF00108 Thiolase, N-terminal domain FPK90_01170 PF00581 Rhodanese-like domain FPK90_01175 PF02556 Preprotein translocase subunit SecB FPK90_01180 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FPK90_01180 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FPK90_01225 PF01313 Bacterial export proteins, family 3 FPK90_01235 PF01312 FlhB HrpN YscU SpaS Family FPK90_01240 PF00771 FHIPEP family FPK90_01245 PF00460 Flagella basal body rod protein FPK90_01245 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FPK90_01250 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FPK90_01250 PF00460 Flagella basal body rod protein FPK90_01265 PF02119 Flagellar P-ring protein FPK90_01280 PF02049 Flagellar hook-basal body complex protein FliE FPK90_01285 PF01514 Secretory protein of YscJ/FliF family FPK90_01285 PF08345 Flagellar M-ring protein C-terminal FPK90_01300 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FPK90_01300 PF02874 ATP synthase alpha/beta family, beta-barrel domain FPK90_01300 PF18269 T3SS EscN ATPase C-terminal domain FPK90_01315 PF03963 Flagellar hook capping protein - N-terminal region FPK90_01320 PF00460 Flagella basal body rod protein FPK90_01320 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FPK90_01320 PF07559 Flagellar basal body protein FlaE FPK90_01330 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FPK90_01340 PF00813 FliP family FPK90_01345 PF04539 Sigma-70 region 3 FPK90_01345 PF04542 Sigma-70 region 2 FPK90_01345 PF00140 Sigma-70 factor, region 1.2 FPK90_01345 PF04545 Sigma-70, region 4 FPK90_01350 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FPK90_01350 PF00205 Thiamine pyrophosphate enzyme, central domain FPK90_01350 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FPK90_01355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_01360 PF00158 Sigma-54 interaction domain FPK90_01360 PF00072 Response regulator receiver domain FPK90_01360 PF02954 Bacterial regulatory protein, Fis family FPK90_01375 PF07690 Major Facilitator Superfamily FPK90_01380 PF00588 SpoU rRNA Methylase family FPK90_01395 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FPK90_01395 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FPK90_01400 PF13784 Fic/DOC family N-terminal FPK90_01400 PF02661 Fic/DOC family FPK90_01405 PF00561 alpha/beta hydrolase fold FPK90_01410 PF03692 Putative zinc- or iron-chelating domain FPK90_01415 PF00501 AMP-binding enzyme FPK90_01420 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family FPK90_01445 PF01820 D-ala D-ala ligase N-terminus FPK90_01445 PF07478 D-ala D-ala ligase C-terminus FPK90_01455 PF03109 ABC1 family FPK90_01465 PF00849 RNA pseudouridylate synthase FPK90_01475 PF00472 RF-1 domain FPK90_01485 PF01112 Asparaginase FPK90_01490 PF01432 Peptidase family M3 FPK90_01495 PF12706 Beta-lactamase superfamily domain FPK90_01520 PF12833 Helix-turn-helix domain FPK90_01525 PF00999 Sodium/hydrogen exchanger family FPK90_01530 PF03466 LysR substrate binding domain FPK90_01530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FPK90_01535 PF01274 Malate synthase FPK90_01540 PF00463 Isocitrate lyase family FPK90_01545 PF00990 Diguanylate cyclase, GGDEF domain FPK90_01565 PF00326 Prolyl oligopeptidase family FPK90_01570 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FPK90_01570 PF00364 Biotin-requiring enzyme FPK90_01570 PF00289 Biotin carboxylase, N-terminal domain FPK90_01570 PF02785 Biotin carboxylase C-terminal domain FPK90_01575 PF01039 Carboxyl transferase domain FPK90_01580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FPK90_01580 PF02770 Acyl-CoA dehydrogenase, middle domain FPK90_01580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FPK90_01635 PF07683 Cobalamin synthesis protein cobW C-terminal domain FPK90_01635 PF02492 CobW/HypB/UreG, nucleotide-binding domain FPK90_01655 PF03969 AFG1-like ATPase FPK90_01660 PF01047 MarR family FPK90_01665 PF02566 OsmC-like protein FPK90_01695 PF00107 Zinc-binding dehydrogenase FPK90_01695 PF16884 N-terminal domain of oxidoreductase FPK90_01710 PF00849 RNA pseudouridylate synthase FPK90_01715 PF00593 TonB dependent receptor FPK90_01725 PF04408 Helicase associated domain (HA2) FPK90_01725 PF00271 Helicase conserved C-terminal domain FPK90_01725 PF08482 ATP-dependent helicase C-terminal FPK90_01725 PF00270 DEAD/DEAH box helicase FPK90_01735 PF07308 Protein of unknown function (DUF1456) FPK90_01740 PF00576 HIUase/Transthyretin family FPK90_01745 PF13454 FAD-NAD(P)-binding FPK90_01750 PF01014 Uricase FPK90_01750 PF09349 OHCU decarboxylase FPK90_01765 PF00266 Aminotransferase class-V FPK90_01770 PF07687 Peptidase dimerisation domain FPK90_01770 PF01546 Peptidase family M20/M25/M40 FPK90_01775 PF03466 LysR substrate binding domain FPK90_01775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FPK90_01780 PF07690 Major Facilitator Superfamily FPK90_01795 PF01425 Amidase FPK90_01800 PF01156 Inosine-uridine preferring nucleoside hydrolase FPK90_01810 PF00860 Permease family FPK90_01820 PF00111 2Fe-2S iron-sulfur cluster binding domain FPK90_01825 PF00355 Rieske [2Fe-2S] domain FPK90_01830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FPK90_01830 PF03466 LysR substrate binding domain FPK90_01835 PF01026 TatD related DNase FPK90_01850 PF03466 LysR substrate binding domain FPK90_01850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FPK90_01855 PF07690 Major Facilitator Superfamily FPK90_01870 PF02146 Sir2 family FPK90_01875 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FPK90_01880 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FPK90_01880 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FPK90_01890 PF00551 Formyl transferase FPK90_01895 PF00486 Transcriptional regulatory protein, C terminal FPK90_01895 PF00072 Response regulator receiver domain FPK90_01900 PF00512 His Kinase A (phospho-acceptor) domain FPK90_01900 PF00672 HAMP domain FPK90_01900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_01905 PF00529 HlyD membrane-fusion protein of T1SS FPK90_01905 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FPK90_01910 PF00873 AcrB/AcrD/AcrF family FPK90_01915 PF02321 Outer membrane efflux protein FPK90_01930 PF02677 Epoxyqueuosine reductase QueH FPK90_01935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FPK90_01935 PF03466 LysR substrate binding domain FPK90_01940 PF03358 NADPH-dependent FMN reductase FPK90_01950 PF08267 Cobalamin-independent synthase, N-terminal domain FPK90_01950 PF01717 Cobalamin-independent synthase, Catalytic domain FPK90_01955 PF03812 2-keto-3-deoxygluconate permease FPK90_01970 PF05368 NmrA-like family FPK90_01975 PF01638 HxlR-like helix-turn-helix FPK90_01995 PF03377 TAL effector repeat FPK90_02015 PF03377 TAL effector repeat FPK90_02035 PF03377 TAL effector repeat FPK90_02050 PF13495 Phage integrase, N-terminal SAM-like domain FPK90_02050 PF00589 Phage integrase family FPK90_02055 PF00920 Dehydratase family FPK90_02070 PF00132 Bacterial transferase hexapeptide (six repeats) FPK90_02080 PF07690 Major Facilitator Superfamily FPK90_02085 PF01966 HD domain FPK90_02085 PF11871 Domain of unknown function (DUF3391) FPK90_02110 PF00171 Aldehyde dehydrogenase family FPK90_02120 PF01494 FAD binding domain FPK90_02130 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FPK90_02130 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FPK90_02135 PF00230 Major intrinsic protein FPK90_02140 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FPK90_02140 PF01266 FAD dependent oxidoreductase FPK90_02145 PF00455 DeoR C terminal sensor domain FPK90_02145 PF08220 DeoR-like helix-turn-helix domain FPK90_02155 PF00355 Rieske [2Fe-2S] domain FPK90_02160 PF01144 Coenzyme A transferase FPK90_02165 PF01144 Coenzyme A transferase FPK90_02170 PF00108 Thiolase, N-terminal domain FPK90_02170 PF02803 Thiolase, C-terminal domain FPK90_02175 PF00775 Dioxygenase FPK90_02175 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal FPK90_02180 PF00775 Dioxygenase FPK90_02180 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal FPK90_02185 PF00206 Lyase FPK90_02185 PF10397 Adenylosuccinate lyase C-terminus FPK90_02190 PF12146 Serine aminopeptidase, S33 FPK90_02195 PF02627 Carboxymuconolactone decarboxylase family FPK90_02210 PF01614 Bacterial transcriptional regulator FPK90_02210 PF09339 IclR helix-turn-helix domain FPK90_02220 PF07859 alpha/beta hydrolase fold FPK90_02225 PF10677 Protein of unknown function (DUF2490) FPK90_02230 PF01134 Glucose inhibited division protein A FPK90_02230 PF13932 GidA associated domain FPK90_02240 PF00291 Pyridoxal-phosphate dependent enzyme FPK90_02260 PF13649 Methyltransferase domain FPK90_02270 PF12697 Alpha/beta hydrolase family FPK90_02280 PF00155 Aminotransferase class I and II FPK90_02285 PF04055 Radical SAM superfamily FPK90_02285 PF06968 Biotin and Thiamin Synthesis associated domain FPK90_02295 PF01040 UbiA prenyltransferase family FPK90_02320 PF05819 NolX protein FPK90_02360 PF01313 Bacterial export proteins, family 3 FPK90_02365 PF00813 FliP family FPK90_02380 PF00771 FHIPEP family FPK90_02385 PF01312 FlhB HrpN YscU SpaS Family FPK90_02400 PF01514 Secretory protein of YscJ/FliF family FPK90_02415 PF18269 T3SS EscN ATPase C-terminal domain FPK90_02415 PF02874 ATP synthase alpha/beta family, beta-barrel domain FPK90_02415 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FPK90_02425 PF01311 Bacterial export proteins, family 1 FPK90_02440 PF01464 Transglycosylase SLT domain FPK90_02470 PF03109 ABC1 family FPK90_02480 PF05661 Protein of unknown function (DUF808) FPK90_02485 PF00072 Response regulator receiver domain FPK90_02485 PF00990 Diguanylate cyclase, GGDEF domain FPK90_02490 PF00534 Glycosyl transferases group 1 FPK90_02490 PF08323 Starch synthase catalytic domain FPK90_02495 PF02806 Alpha amylase, C-terminal all-beta domain FPK90_02495 PF00128 Alpha amylase, catalytic domain FPK90_02495 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FPK90_02500 PF00128 Alpha amylase, catalytic domain FPK90_02500 PF11941 Domain of unknown function (DUF3459) FPK90_02500 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FPK90_02505 PF02446 4-alpha-glucanotransferase FPK90_02510 PF00128 Alpha amylase, catalytic domain FPK90_02520 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FPK90_02520 PF00128 Alpha amylase, catalytic domain FPK90_02525 PF13460 NAD(P)H-binding FPK90_02540 PF06903 VirK protein FPK90_02555 PF00271 Helicase conserved C-terminal domain FPK90_02555 PF00270 DEAD/DEAH box helicase FPK90_02560 PF00364 Biotin-requiring enzyme FPK90_02560 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FPK90_02570 PF02779 Transketolase, pyrimidine binding domain FPK90_02570 PF02780 Transketolase, C-terminal domain FPK90_02575 PF00676 Dehydrogenase E1 component FPK90_02585 PF03301 Tryptophan 2,3-dioxygenase FPK90_02590 PF00854 POT family FPK90_02600 PF01047 MarR family FPK90_02605 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FPK90_02610 PF04480 Protein of unknown function (DUF559) FPK90_02615 PF04209 homogentisate 1,2-dioxygenase FPK90_02635 PF03334 Na+/H+ antiporter subunit FPK90_02640 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FPK90_02650 PF00361 Proton-conducting membrane transporter FPK90_02655 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FPK90_02660 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FPK90_02660 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FPK90_02660 PF13244 Domain of unknown function (DUF4040) FPK90_02660 PF00361 Proton-conducting membrane transporter FPK90_02675 PF07504 Fungalysin/Thermolysin Propeptide Motif FPK90_02675 PF01483 Proprotein convertase P-domain FPK90_02675 PF01447 Thermolysin metallopeptidase, catalytic domain FPK90_02675 PF02868 Thermolysin metallopeptidase, alpha-helical domain FPK90_02685 PF00182 Chitinase class I FPK90_02705 PF01259 SAICAR synthetase FPK90_02710 PF05099 Tellurite resistance protein TerB FPK90_02710 PF00226 DnaJ domain FPK90_02720 PF00834 Ribulose-phosphate 3 epimerase family FPK90_02725 PF00583 Acetyltransferase (GNAT) family FPK90_02730 PF00781 Diacylglycerol kinase catalytic domain FPK90_02735 PF00425 chorismate binding enzyme FPK90_02735 PF04715 Anthranilate synthase component I, N terminal region FPK90_02745 PF00117 Glutamine amidotransferase class-I FPK90_02760 PF02885 Glycosyl transferase family, helical bundle domain FPK90_02760 PF00591 Glycosyl transferase family, a/b domain FPK90_02765 PF00218 Indole-3-glycerol phosphate synthase FPK90_02775 PF00325 Bacterial regulatory proteins, crp family FPK90_02775 PF00027 Cyclic nucleotide-binding domain FPK90_02780 PF02675 S-adenosylmethionine decarboxylase FPK90_02785 PF00893 Small Multidrug Resistance protein FPK90_02790 PF03232 Ubiquinone biosynthesis protein COQ7 FPK90_02795 PF00572 Ribosomal protein L13 FPK90_02800 PF00380 Ribosomal protein S9/S16 FPK90_02815 PF00293 NUDIX domain FPK90_02825 PF00210 Ferritin-like domain FPK90_02830 PF01627 Hpt domain FPK90_02830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_02830 PF00072 Response regulator receiver domain FPK90_02830 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FPK90_02830 PF00672 HAMP domain FPK90_02830 PF00512 His Kinase A (phospho-acceptor) domain FPK90_02835 PF00486 Transcriptional regulatory protein, C terminal FPK90_02835 PF00072 Response regulator receiver domain FPK90_02855 PF01521 Iron-sulphur cluster biosynthesis FPK90_02870 PF00293 NUDIX domain FPK90_02870 PF09297 NADH pyrophosphatase zinc ribbon domain FPK90_02870 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain FPK90_02875 PF03186 CobD/Cbib protein FPK90_02875 PF17113 Regulatory signalling modulator protein AmpE FPK90_02890 PF07690 Major Facilitator Superfamily FPK90_02900 PF07690 Major Facilitator Superfamily FPK90_02905 PF12805 FUSC-like inner membrane protein yccS FPK90_02915 PF02843 Phosphoribosylglycinamide synthetase, C domain FPK90_02915 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FPK90_02915 PF02844 Phosphoribosylglycinamide synthetase, N domain FPK90_02925 PF01808 AICARFT/IMPCHase bienzyme FPK90_02925 PF02142 MGS-like domain FPK90_02930 PF01066 CDP-alcohol phosphatidyltransferase FPK90_02935 PF12146 Serine aminopeptidase, S33 FPK90_02935 PF12147 Putative methyltransferase FPK90_02940 PF00782 Dual specificity phosphatase, catalytic domain FPK90_02970 PF02954 Bacterial regulatory protein, Fis family FPK90_02990 PF01381 Helix-turn-helix FPK90_03025 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FPK90_03025 PF02785 Biotin carboxylase C-terminal domain FPK90_03025 PF00289 Biotin carboxylase, N-terminal domain FPK90_03035 PF00364 Biotin-requiring enzyme FPK90_03040 PF01220 Dehydroquinase class II FPK90_03045 PF11412 Disulphide bond corrector protein DsbC FPK90_03045 PF02683 Cytochrome C biogenesis protein transmembrane region FPK90_03050 PF03091 CutA1 divalent ion tolerance protein FPK90_03065 PF01852 START domain FPK90_03080 PF00106 short chain dehydrogenase FPK90_03085 PF04231 Endonuclease I FPK90_03095 PF00166 Chaperonin 10 Kd subunit FPK90_03100 PF00118 TCP-1/cpn60 chaperonin family FPK90_03110 PF07715 TonB-dependent Receptor Plug Domain FPK90_03110 PF00593 TonB dependent receptor FPK90_03115 PF00793 DAHP synthetase I family FPK90_03130 PF08450 SMP-30/Gluconolactonase/LRE-like region FPK90_03140 PF08335 GlnD PII-uridylyltransferase FPK90_03140 PF03710 Glutamate-ammonia ligase adenylyltransferase FPK90_03145 PF02592 Putative vitamin uptake transporter FPK90_03165 PF00881 Nitroreductase family FPK90_03170 PF04264 YceI-like domain FPK90_03195 PF16957 Malonate decarboxylase, alpha subunit, transporter FPK90_03200 PF06857 Malonate decarboxylase delta subunit (MdcD) FPK90_03205 PF01039 Carboxyl transferase domain FPK90_03215 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG FPK90_03220 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase FPK90_03225 PF08659 KR domain FPK90_03225 PF00550 Phosphopantetheine attachment site FPK90_03225 PF16197 Ketoacyl-synthetase C-terminal extension FPK90_03225 PF00698 Acyl transferase domain FPK90_03225 PF02801 Beta-ketoacyl synthase, C-terminal domain FPK90_03225 PF00109 Beta-ketoacyl synthase, N-terminal domain FPK90_03235 PF07729 FCD domain FPK90_03235 PF00392 Bacterial regulatory proteins, gntR family FPK90_03240 PF13419 Haloacid dehalogenase-like hydrolase FPK90_03270 PF07745 Glycosyl hydrolase family 53 FPK90_03275 PF17831 Pyruvate dehydrogenase E1 component middle domain FPK90_03275 PF00456 Transketolase, thiamine diphosphate binding domain FPK90_03285 PF00145 C-5 cytosine-specific DNA methylase FPK90_03365 PF00106 short chain dehydrogenase FPK90_03380 PF00106 short chain dehydrogenase FPK90_03390 PF13409 Glutathione S-transferase, N-terminal domain FPK90_03410 PF12823 Domain of unknown function (DUF3817) FPK90_03410 PF03176 MMPL family FPK90_03420 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region FPK90_03420 PF00326 Prolyl oligopeptidase family FPK90_03430 PF07759 Protein of unknown function (DUF1615) FPK90_03440 PF00990 Diguanylate cyclase, GGDEF domain FPK90_03440 PF05230 MASE2 domain FPK90_03460 PF00892 EamA-like transporter family FPK90_03465 PF00497 Bacterial extracellular solute-binding proteins, family 3 FPK90_03475 PF00324 Amino acid permease FPK90_03485 PF01544 CorA-like Mg2+ transporter protein FPK90_03495 PF01204 Trehalase FPK90_03510 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FPK90_03510 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FPK90_03540 PF00990 Diguanylate cyclase, GGDEF domain FPK90_03540 PF00563 EAL domain FPK90_03540 PF08448 PAS fold FPK90_03540 PF08447 PAS fold FPK90_03545 PF02203 Tar ligand binding domain homologue FPK90_03545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FPK90_03545 PF00672 HAMP domain FPK90_03550 PF00150 Cellulase (glycosyl hydrolase family 5) FPK90_03550 PF00553 Cellulose binding domain FPK90_03555 PF00916 Sulfate permease family FPK90_03555 PF01740 STAS domain FPK90_03565 PF08448 PAS fold FPK90_03565 PF00990 Diguanylate cyclase, GGDEF domain FPK90_03585 PF13632 Glycosyl transferase family group 2 FPK90_03595 PF07694 5TMR of 5TMR-LYT FPK90_03595 PF06580 Histidine kinase FPK90_03600 PF00072 Response regulator receiver domain FPK90_03600 PF04397 LytTr DNA-binding domain FPK90_03605 PF03900 Porphobilinogen deaminase, C-terminal domain FPK90_03605 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FPK90_03635 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FPK90_03635 PF00326 Prolyl oligopeptidase family FPK90_03645 PF00155 Aminotransferase class I and II FPK90_03650 PF00326 Prolyl oligopeptidase family FPK90_03650 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FPK90_03655 PF04304 Protein of unknown function (DUF454) FPK90_03665 PF01678 Diaminopimelate epimerase FPK90_03675 PF00589 Phage integrase family FPK90_03675 PF02899 Phage integrase, N-terminal SAM-like domain FPK90_03680 PF00227 Proteasome subunit FPK90_03685 PF07724 AAA domain (Cdc48 subfamily) FPK90_03685 PF10431 C-terminal, D2-small domain, of ClpB protein FPK90_03685 PF00004 ATPase family associated with various cellular activities (AAA) FPK90_03695 PF13673 Acetyltransferase (GNAT) domain FPK90_03700 PF13533 Biotin-lipoyl like FPK90_03710 PF01209 ubiE/COQ5 methyltransferase family FPK90_03715 PF00563 EAL domain FPK90_03715 PF03707 Bacterial signalling protein N terminal repeat FPK90_03715 PF00990 Diguanylate cyclase, GGDEF domain FPK90_03720 PF01433 Peptidase family M1 domain FPK90_03720 PF11838 ERAP1-like C-terminal domain FPK90_03740 PF13360 PQQ-like domain FPK90_03745 PF00497 Bacterial extracellular solute-binding proteins, family 3 FPK90_03760 PF00107 Zinc-binding dehydrogenase FPK90_03760 PF08240 Alcohol dehydrogenase GroES-like domain FPK90_03770 PF00158 Sigma-54 interaction domain FPK90_03770 PF01590 GAF domain FPK90_03770 PF02954 Bacterial regulatory protein, Fis family FPK90_03775 PF00294 pfkB family carbohydrate kinase FPK90_03785 PF04085 rod shape-determining protein MreC FPK90_03795 PF00905 Penicillin binding protein transpeptidase domain FPK90_03795 PF03717 Penicillin-binding Protein dimerisation domain FPK90_03800 PF01098 Cell cycle protein FPK90_03805 PF00295 Glycosyl hydrolases family 28 FPK90_03810 PF13406 Transglycosylase SLT domain FPK90_03815 PF05036 Sporulation related domain FPK90_03815 PF03330 Lytic transglycolase FPK90_03825 PF00768 D-alanyl-D-alanine carboxypeptidase FPK90_03825 PF07943 Penicillin-binding protein 5, C-terminal domain FPK90_03835 PF04359 Protein of unknown function (DUF493) FPK90_03840 PF03099 Biotin/lipoate A/B protein ligase family FPK90_03845 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FPK90_03845 PF04055 Radical SAM superfamily FPK90_03850 PF17804 Tail specific protease N-terminal domain FPK90_03850 PF00595 PDZ domain FPK90_03850 PF03572 Peptidase family S41 FPK90_03850 PF11818 C-terminal domain of tail specific protease (DUF3340) FPK90_03860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FPK90_03860 PF03466 LysR substrate binding domain FPK90_03870 PF00293 NUDIX domain FPK90_03870 PF01467 Cytidylyltransferase-like FPK90_03905 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FPK90_03905 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FPK90_03910 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FPK90_03910 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FPK90_03915 PF04972 BON domain FPK90_03920 PF00360 Phytochrome region FPK90_03920 PF08446 PAS fold FPK90_03920 PF00512 His Kinase A (phospho-acceptor) domain FPK90_03920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_03920 PF01590 GAF domain FPK90_03925 PF00072 Response regulator receiver domain FPK90_03930 PF00512 His Kinase A (phospho-acceptor) domain FPK90_03930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_03935 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FPK90_03985 PF03958 Bacterial type II/III secretion system short domain FPK90_03985 PF00263 Bacterial type II and III secretion system protein FPK90_03990 PF00437 Type II/IV secretion system protein FPK90_03995 PF00482 Type II secretion system (T2SS), protein F FPK90_04000 PF08334 Type II secretion system (T2SS), protein G FPK90_04000 PF07963 Prokaryotic N-terminal methylation motif FPK90_04010 PF07963 Prokaryotic N-terminal methylation motif FPK90_04010 PF02501 Type II secretion system (T2SS), protein I FPK90_04015 PF11612 Type II secretion system (T2SS), protein J FPK90_04015 PF07963 Prokaryotic N-terminal methylation motif FPK90_04020 PF03934 Type II secretion system (T2SS), protein K FPK90_04045 PF00703 Glycosyl hydrolases family 2 FPK90_04045 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 FPK90_04045 PF02837 Glycosyl hydrolases family 2, sugar binding domain FPK90_04045 PF16355 Domain of unknown function (DUF4982) FPK90_04045 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FPK90_04065 PF07690 Major Facilitator Superfamily FPK90_04070 PF00356 Bacterial regulatory proteins, lacI family FPK90_04075 PF01380 SIS domain FPK90_04080 PF01979 Amidohydrolase family FPK90_04090 PF01966 HD domain FPK90_04090 PF01743 Poly A polymerase head domain FPK90_04090 PF12627 Probable RNA and SrmB- binding site of polymerase A FPK90_04095 PF05199 GMC oxidoreductase FPK90_04095 PF00732 GMC oxidoreductase FPK90_04100 PF00171 Aldehyde dehydrogenase family FPK90_04105 PF02028 BCCT, betaine/carnitine/choline family transporter FPK90_04120 PF01323 DSBA-like thioredoxin domain FPK90_04130 PF00034 Cytochrome c FPK90_04135 PF01926 50S ribosome-binding GTPase FPK90_04140 PF00753 Metallo-beta-lactamase superfamily FPK90_04140 PF10996 Beta-Casp domain FPK90_04140 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FPK90_04155 PF04107 Glutamate-cysteine ligase family 2(GCS2) FPK90_04160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_04160 PF00672 HAMP domain FPK90_04160 PF00512 His Kinase A (phospho-acceptor) domain FPK90_04165 PF00486 Transcriptional regulatory protein, C terminal FPK90_04165 PF00072 Response regulator receiver domain FPK90_04180 PF02583 Metal-sensitive transcriptional repressor FPK90_04185 PF08240 Alcohol dehydrogenase GroES-like domain FPK90_04185 PF00107 Zinc-binding dehydrogenase FPK90_04190 PF04828 Glutathione-dependent formaldehyde-activating enzyme FPK90_04195 PF00756 Putative esterase FPK90_04205 PF00392 Bacterial regulatory proteins, gntR family FPK90_04205 PF00155 Aminotransferase class I and II FPK90_04210 PF02567 Phenazine biosynthesis-like protein FPK90_04225 PF12848 ABC transporter FPK90_04225 PF00005 ABC transporter FPK90_04235 PF00464 Serine hydroxymethyltransferase FPK90_04240 PF03477 ATP cone domain FPK90_04250 PF01872 RibD C-terminal domain FPK90_04250 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FPK90_04260 PF00677 Lumazine binding domain FPK90_04265 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FPK90_04265 PF00925 GTP cyclohydrolase II FPK90_04270 PF00885 6,7-dimethyl-8-ribityllumazine synthase FPK90_04275 PF01029 NusB family FPK90_04280 PF02769 AIR synthase related protein, C-terminal domain FPK90_04280 PF00586 AIR synthase related protein, N-terminal domain FPK90_04305 PF03814 Potassium-transporting ATPase A subunit FPK90_04315 PF02669 K+-transporting ATPase, c chain FPK90_04320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_04320 PF02702 Osmosensitive K+ channel His kinase sensor domain FPK90_04320 PF13492 GAF domain FPK90_04320 PF13493 Domain of unknown function (DUF4118) FPK90_04320 PF00512 His Kinase A (phospho-acceptor) domain FPK90_04325 PF00072 Response regulator receiver domain FPK90_04325 PF00486 Transcriptional regulatory protein, C terminal FPK90_04340 PF01565 FAD binding domain FPK90_04340 PF02913 FAD linked oxidases, C-terminal domain FPK90_04350 PF02021 Uncharacterised protein family UPF0102 FPK90_04360 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FPK90_04385 PF02381 MraZ protein, putative antitoxin-like FPK90_04390 PF01795 MraW methylase family FPK90_04395 PF04999 Cell division protein FtsL FPK90_04400 PF03717 Penicillin-binding Protein dimerisation domain FPK90_04400 PF00905 Penicillin binding protein transpeptidase domain FPK90_04405 PF01225 Mur ligase family, catalytic domain FPK90_04405 PF08245 Mur ligase middle domain FPK90_04405 PF02875 Mur ligase family, glutamate ligase domain FPK90_04410 PF08245 Mur ligase middle domain FPK90_04410 PF02875 Mur ligase family, glutamate ligase domain FPK90_04410 PF01225 Mur ligase family, catalytic domain FPK90_04415 PF00953 Glycosyl transferase family 4 FPK90_04420 PF01098 Cell cycle protein FPK90_04425 PF03033 Glycosyltransferase family 28 N-terminal domain FPK90_04425 PF04101 Glycosyltransferase family 28 C-terminal domain FPK90_04430 PF08245 Mur ligase middle domain FPK90_04430 PF02875 Mur ligase family, glutamate ligase domain FPK90_04430 PF01225 Mur ligase family, catalytic domain FPK90_04435 PF01820 D-ala D-ala ligase N-terminus FPK90_04435 PF07478 D-ala D-ala ligase C-terminus FPK90_04440 PF03799 Cell division protein FtsQ FPK90_04440 PF08478 POTRA domain, FtsQ-type FPK90_04445 PF02491 SHS2 domain inserted in FTSA FPK90_04450 PF12327 FtsZ family, C-terminal domain FPK90_04450 PF00091 Tubulin/FtsZ family, GTPase domain FPK90_04455 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FPK90_04465 PF01551 Peptidase family M23 FPK90_04465 PF08525 Opacity-associated protein A N-terminal motif FPK90_04465 PF01476 LysM domain FPK90_04470 PF02810 SEC-C motif FPK90_04470 PF07517 SecA DEAD-like domain FPK90_04470 PF01043 SecA preprotein cross-linking domain FPK90_04470 PF07516 SecA Wing and Scaffold domain FPK90_04475 PF00293 NUDIX domain FPK90_04485 PF02219 Methylenetetrahydrofolate reductase FPK90_04500 PF16197 Ketoacyl-synthetase C-terminal extension FPK90_04500 PF08659 KR domain FPK90_04500 PF00107 Zinc-binding dehydrogenase FPK90_04500 PF08240 Alcohol dehydrogenase GroES-like domain FPK90_04500 PF00698 Acyl transferase domain FPK90_04500 PF00550 Phosphopantetheine attachment site FPK90_04500 PF14765 Polyketide synthase dehydratase FPK90_04500 PF00109 Beta-ketoacyl synthase, N-terminal domain FPK90_04500 PF02801 Beta-ketoacyl synthase, C-terminal domain FPK90_04505 PF00082 Subtilase family FPK90_04505 PF09286 Pro-kumamolisin, activation domain FPK90_04525 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FPK90_04535 PF00128 Alpha amylase, catalytic domain FPK90_04560 PF13649 Methyltransferase domain FPK90_04565 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FPK90_04565 PF05221 S-adenosyl-L-homocysteine hydrolase FPK90_04575 PF00311 Phosphoenolpyruvate carboxylase FPK90_04610 PF00328 Histidine phosphatase superfamily (branch 2) FPK90_04615 PF00438 S-adenosylmethionine synthetase, N-terminal domain FPK90_04615 PF02773 S-adenosylmethionine synthetase, C-terminal domain FPK90_04615 PF02772 S-adenosylmethionine synthetase, central domain FPK90_04625 PF13649 Methyltransferase domain FPK90_04630 PF01207 Dihydrouridine synthase (Dus) FPK90_04640 PF00294 pfkB family carbohydrate kinase FPK90_04645 PF07662 Na+ dependent nucleoside transporter C-terminus FPK90_04645 PF01773 Na+ dependent nucleoside transporter N-terminus FPK90_04645 PF07670 Nucleoside recognition FPK90_04655 PF00248 Aldo/keto reductase family FPK90_04665 PF07715 TonB-dependent Receptor Plug Domain FPK90_04665 PF00593 TonB dependent receptor FPK90_04685 PF00528 Binding-protein-dependent transport system inner membrane component FPK90_04690 PF00005 ABC transporter FPK90_04700 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FPK90_04710 PF00005 ABC transporter FPK90_04715 PF13472 GDSL-like Lipase/Acylhydrolase family FPK90_04720 PF00486 Transcriptional regulatory protein, C terminal FPK90_04720 PF00072 Response regulator receiver domain FPK90_04725 PF08521 Two-component sensor kinase N-terminal FPK90_04725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_04725 PF00512 His Kinase A (phospho-acceptor) domain FPK90_04735 PF01219 Prokaryotic diacylglycerol kinase FPK90_04755 PF01790 Prolipoprotein diacylglyceryl transferase FPK90_04760 PF00303 Thymidylate synthase FPK90_04770 PF00186 Dihydrofolate reductase FPK90_04775 PF00158 Sigma-54 interaction domain FPK90_04780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FPK90_04780 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FPK90_04785 PF00005 ABC transporter FPK90_04790 PF00528 Binding-protein-dependent transport system inner membrane component FPK90_04800 PF00296 Luciferase-like monooxygenase FPK90_04805 PF03358 NADPH-dependent FMN reductase FPK90_04825 PF00296 Luciferase-like monooxygenase FPK90_04830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FPK90_04835 PF00528 Binding-protein-dependent transport system inner membrane component FPK90_04845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FPK90_04845 PF00005 ABC transporter FPK90_04850 PF00149 Calcineurin-like phosphoesterase FPK90_04855 PF04379 ApaG domain FPK90_04860 PF00398 Ribosomal RNA adenine dimethylase FPK90_04865 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FPK90_04870 PF00639 PPIC-type PPIASE domain FPK90_04870 PF09312 SurA N-terminal domain FPK90_04875 PF03968 OstA-like protein FPK90_04875 PF04453 LPS transport system D FPK90_04880 PF00850 Histone deacetylase domain FPK90_04885 PF01923 Cobalamin adenosyltransferase FPK90_04900 PF01494 FAD binding domain FPK90_04905 PF01494 FAD binding domain FPK90_04925 PF00392 Bacterial regulatory proteins, gntR family FPK90_04925 PF07729 FCD domain FPK90_04930 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase FPK90_04935 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase FPK90_04935 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit FPK90_04940 PF03466 LysR substrate binding domain FPK90_04940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FPK90_04945 PF13193 AMP-binding enzyme C-terminal domain FPK90_04945 PF00501 AMP-binding enzyme FPK90_04950 PF00171 Aldehyde dehydrogenase family FPK90_04955 PF00378 Enoyl-CoA hydratase/isomerase FPK90_04975 PF08450 SMP-30/Gluconolactonase/LRE-like region FPK90_04980 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FPK90_04980 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FPK90_04990 PF18125 RlmM ferredoxin-like domain FPK90_04990 PF01728 FtsJ-like methyltransferase FPK90_05010 PF00892 EamA-like transporter family FPK90_05020 PF00749 tRNA synthetases class I (E and Q), catalytic domain FPK90_05020 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain FPK90_05035 PF00990 Diguanylate cyclase, GGDEF domain FPK90_05035 PF00072 Response regulator receiver domain FPK90_05040 PF00072 Response regulator receiver domain FPK90_05040 PF01627 Hpt domain FPK90_05040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_05040 PF00512 His Kinase A (phospho-acceptor) domain FPK90_05040 PF17149 Periplasmic sensor domain found in signal transduction proteins FPK90_05040 PF00672 HAMP domain FPK90_05045 PF00072 Response regulator receiver domain FPK90_05045 PF00196 Bacterial regulatory proteins, luxR family FPK90_05055 PF01625 Peptide methionine sulfoxide reductase FPK90_05065 PF00923 Transaldolase/Fructose-6-phosphate aldolase FPK90_05070 PF14760 Rnk N-terminus FPK90_05070 PF01272 Transcription elongation factor, GreA/GreB, C-term FPK90_05080 PF03466 LysR substrate binding domain FPK90_05080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FPK90_05085 PF07992 Pyridine nucleotide-disulphide oxidoreductase FPK90_05085 PF13192 Thioredoxin domain FPK90_05090 PF10417 C-terminal domain of 1-Cys peroxiredoxin FPK90_05090 PF00578 AhpC/TSA family FPK90_05095 PF05175 Methyltransferase small domain FPK90_05095 PF17827 PrmC N-terminal domain FPK90_05100 PF00561 alpha/beta hydrolase fold FPK90_05110 PF00293 NUDIX domain FPK90_05115 PF01367 5'-3' exonuclease, C-terminal SAM fold FPK90_05115 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FPK90_05115 PF00476 DNA polymerase family A FPK90_05115 PF01612 3'-5' exonuclease FPK90_05145 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FPK90_05145 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FPK90_05145 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FPK90_05165 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FPK90_05170 PF02233 NAD(P) transhydrogenase beta subunit FPK90_05185 PF01063 Amino-transferase class IV FPK90_05190 PF04151 Bacterial pre-peptidase C-terminal domain FPK90_05190 PF00082 Subtilase family FPK90_05195 PF04151 Bacterial pre-peptidase C-terminal domain FPK90_05195 PF00082 Subtilase family FPK90_05200 PF04151 Bacterial pre-peptidase C-terminal domain FPK90_05200 PF00082 Subtilase family FPK90_05205 PF04073 Aminoacyl-tRNA editing domain FPK90_05215 PF17189 Glycosyl hydrolase family 30 beta sandwich domain FPK90_05215 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain FPK90_05225 PF03358 NADPH-dependent FMN reductase FPK90_05230 PF03631 Virulence factor BrkB FPK90_05235 PF08534 Redoxin FPK90_05240 PF00708 Acylphosphatase FPK90_05250 PF03976 Polyphosphate kinase 2 (PPK2) FPK90_05255 PF00994 Probable molybdopterin binding domain FPK90_05265 PF00472 RF-1 domain FPK90_05265 PF03462 PCRF domain FPK90_05270 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain FPK90_05270 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain FPK90_05270 PF01488 Shikimate / quinate 5-dehydrogenase FPK90_05280 PF03550 Outer membrane lipoprotein LolB FPK90_05285 PF00288 GHMP kinases N terminal domain FPK90_05285 PF08544 GHMP kinases C terminal FPK90_05295 PF14572 Phosphoribosyl synthetase-associated domain FPK90_05295 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FPK90_05300 PF14693 Ribosomal protein TL5, C-terminal domain FPK90_05300 PF01386 Ribosomal L25p family FPK90_05305 PF01195 Peptidyl-tRNA hydrolase FPK90_05310 PF01926 50S ribosome-binding GTPase FPK90_05310 PF06071 Protein of unknown function (DUF933) FPK90_05330 PF00009 Elongation factor Tu GTP binding domain FPK90_05330 PF03144 Elongation factor Tu domain 2 FPK90_05330 PF03143 Elongation factor Tu C-terminal domain FPK90_05340 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FPK90_05345 PF00467 KOW motif FPK90_05345 PF02357 Transcription termination factor nusG FPK90_05350 PF03946 Ribosomal protein L11, N-terminal domain FPK90_05350 PF00298 Ribosomal protein L11, RNA binding domain FPK90_05355 PF00687 Ribosomal protein L1p/L10e family FPK90_05360 PF00466 Ribosomal protein L10 FPK90_05365 PF00542 Ribosomal protein L7/L12 C-terminal domain FPK90_05365 PF16320 Ribosomal protein L7/L12 dimerisation domain FPK90_05370 PF04560 RNA polymerase Rpb2, domain 7 FPK90_05370 PF10385 RNA polymerase beta subunit external 1 domain FPK90_05370 PF04565 RNA polymerase Rpb2, domain 3 FPK90_05370 PF04563 RNA polymerase beta subunit FPK90_05370 PF04561 RNA polymerase Rpb2, domain 2 FPK90_05370 PF00562 RNA polymerase Rpb2, domain 6 FPK90_05375 PF04983 RNA polymerase Rpb1, domain 3 FPK90_05375 PF00623 RNA polymerase Rpb1, domain 2 FPK90_05375 PF05000 RNA polymerase Rpb1, domain 4 FPK90_05375 PF04997 RNA polymerase Rpb1, domain 1 FPK90_05375 PF04998 RNA polymerase Rpb1, domain 5 FPK90_05380 PF00164 Ribosomal protein S12/S23 FPK90_05385 PF00177 Ribosomal protein S7p/S5e FPK90_05390 PF03144 Elongation factor Tu domain 2 FPK90_05390 PF00679 Elongation factor G C-terminus FPK90_05390 PF14492 Elongation Factor G, domain II FPK90_05390 PF03764 Elongation factor G, domain IV FPK90_05390 PF00009 Elongation factor Tu GTP binding domain FPK90_05395 PF03143 Elongation factor Tu C-terminal domain FPK90_05395 PF03144 Elongation factor Tu domain 2 FPK90_05395 PF00009 Elongation factor Tu GTP binding domain FPK90_05400 PF00338 Ribosomal protein S10p/S20e FPK90_05405 PF00297 Ribosomal protein L3 FPK90_05410 PF00573 Ribosomal protein L4/L1 family FPK90_05415 PF00276 Ribosomal protein L23 FPK90_05420 PF00181 Ribosomal Proteins L2, RNA binding domain FPK90_05420 PF03947 Ribosomal Proteins L2, C-terminal domain FPK90_05425 PF00203 Ribosomal protein S19 FPK90_05430 PF00237 Ribosomal protein L22p/L17e FPK90_05435 PF00189 Ribosomal protein S3, C-terminal domain FPK90_05435 PF07650 KH domain FPK90_05440 PF00252 Ribosomal protein L16p/L10e FPK90_05445 PF00831 Ribosomal L29 protein FPK90_05450 PF00366 Ribosomal protein S17 FPK90_05455 PF00238 Ribosomal protein L14p/L23e FPK90_05460 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FPK90_05460 PF00467 KOW motif FPK90_05465 PF00281 Ribosomal protein L5 FPK90_05465 PF00673 ribosomal L5P family C-terminus FPK90_05470 PF00253 Ribosomal protein S14p/S29e FPK90_05475 PF00410 Ribosomal protein S8 FPK90_05480 PF00347 Ribosomal protein L6 FPK90_05485 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FPK90_05490 PF03719 Ribosomal protein S5, C-terminal domain FPK90_05490 PF00333 Ribosomal protein S5, N-terminal domain FPK90_05495 PF00327 Ribosomal protein L30p/L7e FPK90_05500 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FPK90_05505 PF00344 SecY translocase FPK90_05510 PF00416 Ribosomal protein S13/S18 FPK90_05515 PF00411 Ribosomal protein S11 FPK90_05520 PF00163 Ribosomal protein S4/S9 N-terminal domain FPK90_05520 PF01479 S4 domain FPK90_05525 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FPK90_05525 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FPK90_05525 PF01000 RNA polymerase Rpb3/RpoA insert domain FPK90_05530 PF01196 Ribosomal protein L17 FPK90_05535 PF02600 Disulfide bond formation protein DsbB FPK90_05555 PF01474 Class-II DAHP synthetase family FPK90_05565 PF01425 Amidase FPK90_05580 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FPK90_05585 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FPK90_05585 PF00056 lactate/malate dehydrogenase, NAD binding domain FPK90_05590 PF00043 Glutathione S-transferase, C-terminal domain FPK90_05590 PF02798 Glutathione S-transferase, N-terminal domain FPK90_05610 PF07992 Pyridine nucleotide-disulphide oxidoreductase FPK90_05610 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FPK90_05615 PF00107 Zinc-binding dehydrogenase FPK90_05615 PF08240 Alcohol dehydrogenase GroES-like domain FPK90_05625 PF00691 OmpA family FPK90_05625 PF05736 OprF membrane domain FPK90_05635 PF00849 RNA pseudouridylate synthase FPK90_05645 PF00155 Aminotransferase class I and II FPK90_05655 PF00528 Binding-protein-dependent transport system inner membrane component FPK90_05660 PF00528 Binding-protein-dependent transport system inner membrane component FPK90_05665 PF12857 TOBE-like domain FPK90_05665 PF17850 CysA C-terminal regulatory domain FPK90_05665 PF00005 ABC transporter FPK90_05675 PF00107 Zinc-binding dehydrogenase FPK90_05675 PF08240 Alcohol dehydrogenase GroES-like domain FPK90_05690 PF04185 Phosphoesterase family FPK90_05690 PF05506 Domain of unknown function (DUF756) FPK90_05700 PF10459 Peptidase S46 FPK90_05705 PF00300 Histidine phosphatase superfamily (branch 1) FPK90_05710 PF08245 Mur ligase middle domain FPK90_05710 PF02875 Mur ligase family, glutamate ligase domain FPK90_05725 PF00156 Phosphoribosyl transferase domain FPK90_05730 PF04305 Protein of unknown function (DUF455) FPK90_05750 PF00149 Calcineurin-like phosphoesterase FPK90_05755 PF01569 PAP2 superfamily FPK90_05760 PF00534 Glycosyl transferases group 1 FPK90_05760 PF13439 Glycosyltransferase Family 4 FPK90_05765 PF02541 Ppx/GppA phosphatase family FPK90_05770 PF13089 Polyphosphate kinase N-terminal domain FPK90_05770 PF02503 Polyphosphate kinase middle domain FPK90_05770 PF17941 Polyphosphate kinase C-terminal domain 1 FPK90_05770 PF13090 Polyphosphate kinase C-terminal domain 2 FPK90_05775 PF11808 Phosphate regulon sensor protein PhoR FPK90_05775 PF00989 PAS fold FPK90_05775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_05775 PF00512 His Kinase A (phospho-acceptor) domain FPK90_05780 PF00072 Response regulator receiver domain FPK90_05780 PF00486 Transcriptional regulatory protein, C terminal FPK90_05785 PF13181 Tetratricopeptide repeat FPK90_05785 PF01435 Peptidase family M48 FPK90_05790 PF00462 Glutaredoxin FPK90_05800 PF00180 Isocitrate/isopropylmalate dehydrogenase FPK90_06070 PF01555 DNA methylase FPK90_06120 PF05698 Bacterial trigger factor protein (TF) C-terminus FPK90_06120 PF05697 Bacterial trigger factor protein (TF) FPK90_06125 PF00574 Clp protease FPK90_06130 PF10431 C-terminal, D2-small domain, of ClpB protein FPK90_06130 PF06689 ClpX C4-type zinc finger FPK90_06130 PF07724 AAA domain (Cdc48 subfamily) FPK90_06135 PF00004 ATPase family associated with various cellular activities (AAA) FPK90_06135 PF05362 Lon protease (S16) C-terminal proteolytic domain FPK90_06135 PF02190 ATP-dependent protease La (LON) substrate-binding domain FPK90_06140 PF00216 Bacterial DNA-binding protein FPK90_06165 PF01476 LysM domain FPK90_06165 PF05257 CHAP domain FPK90_06170 PF16123 Hydroxyacylglutathione hydrolase C-terminus FPK90_06170 PF00753 Metallo-beta-lactamase superfamily FPK90_06180 PF00075 RNase H FPK90_06185 PF00929 Exonuclease FPK90_06205 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FPK90_06215 PF00753 Metallo-beta-lactamase superfamily FPK90_06215 PF12706 Beta-lactamase superfamily domain FPK90_06220 PF04055 Radical SAM superfamily FPK90_06220 PF06463 Molybdenum Cofactor Synthesis C FPK90_06230 PF01967 MoaC family FPK90_06235 PF02597 ThiS family FPK90_06240 PF02391 MoaE protein FPK90_06255 PF12169 DNA polymerase III subunits gamma and tau domain III FPK90_06255 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FPK90_06255 PF12170 DNA polymerase III tau subunit V interacting with alpha FPK90_06260 PF02575 YbaB/EbfC DNA-binding family FPK90_06265 PF13662 Toprim domain FPK90_06265 PF02132 RecR protein FPK90_06270 PF01230 HIT domain FPK90_06280 PF01841 Transglutaminase-like superfamily FPK90_06280 PF13559 Domain of unknown function (DUF4129) FPK90_06280 PF11992 Domain of unknown function (DUF3488) FPK90_06290 PF07726 ATPase family associated with various cellular activities (AAA) FPK90_06290 PF17863 AAA lid domain FPK90_06310 PF02545 Maf-like protein FPK90_06315 PF02620 Large ribosomal RNA subunit accumulation protein YceD FPK90_06320 PF01783 Ribosomal L32p protein family FPK90_06325 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FPK90_06325 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FPK90_06335 PF00698 Acyl transferase domain FPK90_06345 PF00550 Phosphopantetheine attachment site FPK90_06350 PF00109 Beta-ketoacyl synthase, N-terminal domain FPK90_06350 PF02801 Beta-ketoacyl synthase, C-terminal domain FPK90_06355 PF00425 chorismate binding enzyme FPK90_06355 PF04715 Anthranilate synthase component I, N terminal region FPK90_06360 PF02618 YceG-like family FPK90_06365 PF09115 DNA polymerase III, delta subunit, C terminal FPK90_06405 PF02954 Bacterial regulatory protein, Fis family FPK90_06405 PF00158 Sigma-54 interaction domain FPK90_06405 PF06506 Propionate catabolism activator FPK90_06415 PF00285 Citrate synthase, C-terminal domain FPK90_06420 PF00694 Aconitase C-terminal domain FPK90_06420 PF00330 Aconitase family (aconitate hydratase) FPK90_06425 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH FPK90_06440 PF04303 PrpF protein FPK90_06445 PF00593 TonB dependent receptor FPK90_06445 PF07715 TonB-dependent Receptor Plug Domain FPK90_06460 PF00207 Alpha-2-macroglobulin family FPK90_06460 PF07703 Alpha-2-macroglobulin bait region domain FPK90_06460 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain FPK90_06460 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain FPK90_06460 PF17962 Bacterial macroglobulin domain 6 FPK90_06460 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain FPK90_06460 PF01835 MG2 domain FPK90_06460 PF11974 Bacterial alpha-2-macroglobulin MG3 domain FPK90_06480 PF00912 Transglycosylase FPK90_06480 PF00905 Penicillin binding protein transpeptidase domain FPK90_06480 PF06832 Penicillin-Binding Protein C-terminus Family FPK90_06490 PF08534 Redoxin FPK90_06500 PF00226 DnaJ domain FPK90_06500 PF01556 DnaJ C terminal domain FPK90_06505 PF00072 Response regulator receiver domain FPK90_06510 PF12221 Bacterial membrane protein N terminal FPK90_06510 PF01145 SPFH domain / Band 7 family FPK90_06515 PF01145 SPFH domain / Band 7 family FPK90_06525 PF00709 Adenylosuccinate synthetase FPK90_06530 PF01433 Peptidase family M1 domain FPK90_06530 PF11838 ERAP1-like C-terminal domain FPK90_06540 PF00440 Bacterial regulatory proteins, tetR family FPK90_06550 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) FPK90_06550 PF00271 Helicase conserved C-terminal domain FPK90_06550 PF08463 EcoEI R protein C-terminal FPK90_06550 PF04851 Type III restriction enzyme, res subunit FPK90_06565 PF02384 N-6 DNA Methylase FPK90_06565 PF12161 HsdM N-terminal domain FPK90_06570 PF01420 Type I restriction modification DNA specificity domain FPK90_06600 PF00300 Histidine phosphatase superfamily (branch 1) FPK90_06600 PF13456 Reverse transcriptase-like FPK90_06605 PF01256 Carbohydrate kinase FPK90_06615 PF00723 Glycosyl hydrolases family 15 FPK90_06630 PF17678 Glycosyl hydrolase family 92 N-terminal domain FPK90_06630 PF07971 Glycosyl hydrolase family 92 FPK90_06635 PF00106 short chain dehydrogenase FPK90_06655 PF07992 Pyridine nucleotide-disulphide oxidoreductase FPK90_06675 PF17755 UvrA DNA-binding domain FPK90_06680 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FPK90_06680 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FPK90_06685 PF00941 FAD binding domain in molybdopterin dehydrogenase FPK90_06685 PF03450 CO dehydrogenase flavoprotein C-terminal domain FPK90_06690 PF00111 2Fe-2S iron-sulfur cluster binding domain FPK90_06690 PF01799 [2Fe-2S] binding domain FPK90_06725 PF00717 Peptidase S24-like FPK90_06725 PF01726 LexA DNA binding domain FPK90_06740 PF14579 Helix-hairpin-helix motif FPK90_06740 PF07733 Bacterial DNA polymerase III alpha NTPase domain FPK90_06740 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FPK90_06740 PF02811 PHP domain FPK90_06750 PF00326 Prolyl oligopeptidase family FPK90_06760 PF03169 OPT oligopeptide transporter protein FPK90_06775 PF00326 Prolyl oligopeptidase family FPK90_06775 PF07676 WD40-like Beta Propeller Repeat FPK90_06775 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region FPK90_06795 PF02311 AraC-like ligand binding domain FPK90_06795 PF12833 Helix-turn-helix domain FPK90_06815 PF18011 C-terminal domain found in long catalases FPK90_06815 PF06628 Catalase-related immune-responsive FPK90_06815 PF00199 Catalase FPK90_06820 PF00248 Aldo/keto reductase family FPK90_06825 PF00135 Carboxylesterase family FPK90_06830 PF02347 Glycine cleavage system P-protein FPK90_06835 PF07690 Major Facilitator Superfamily FPK90_06850 PF08019 Phosphoethanolamine transferase EptA/EptB FPK90_06850 PF00884 Sulfatase FPK90_06865 PF00486 Transcriptional regulatory protein, C terminal FPK90_06865 PF00072 Response regulator receiver domain FPK90_06870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_06870 PF00512 His Kinase A (phospho-acceptor) domain FPK90_06870 PF08521 Two-component sensor kinase N-terminal FPK90_06880 PF03776 Septum formation topological specificity factor MinE FPK90_06885 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FPK90_06890 PF03775 Septum formation inhibitor MinC, C-terminal domain FPK90_06890 PF05209 Septum formation inhibitor MinC, N-terminal domain FPK90_06905 PF07730 Histidine kinase FPK90_06910 PF00196 Bacterial regulatory proteins, luxR family FPK90_06910 PF00072 Response regulator receiver domain FPK90_06925 PF00730 HhH-GPD superfamily base excision DNA repair protein FPK90_06960 PF02222 ATP-grasp domain FPK90_06970 PF04376 Arginine-tRNA-protein transferase, N terminus FPK90_06970 PF04377 Arginine-tRNA-protein transferase, C terminus FPK90_06995 PF00378 Enoyl-CoA hydratase/isomerase FPK90_07010 PF00005 ABC transporter FPK90_07010 PF17755 UvrA DNA-binding domain FPK90_07010 PF17760 UvrA interaction domain FPK90_07015 PF00829 Ribosomal prokaryotic L21 protein FPK90_07020 PF01016 Ribosomal L27 protein FPK90_07025 PF01926 50S ribosome-binding GTPase FPK90_07025 PF01018 GTP1/OBG FPK90_07030 PF01649 Ribosomal protein S20 FPK90_07035 PF03023 Lipid II flippase MurJ FPK90_07040 PF01687 Riboflavin kinase FPK90_07040 PF06574 FAD synthetase FPK90_07045 PF08264 Anticodon-binding domain of tRNA FPK90_07045 PF06827 Zinc finger found in FPG and IleRS FPK90_07045 PF00133 tRNA synthetases class I (I, L, M and V) FPK90_07050 PF01252 Signal peptidase (SPase) II FPK90_07055 PF02401 LytB protein FPK90_07065 PF06481 COX Aromatic Rich Motif FPK90_07065 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FPK90_07070 PF00115 Cytochrome C and Quinol oxidase polypeptide I FPK90_07075 PF00510 Cytochrome c oxidase subunit III FPK90_07080 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FPK90_07095 PF18073 Rubredoxin metal binding domain FPK90_07100 PF05656 Protein of unknown function (DUF805) FPK90_07110 PF12833 Helix-turn-helix domain FPK90_07115 PF00183 Hsp90 protein FPK90_07115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_07130 PF08678 Rsbr N terminal FPK90_07130 PF01740 STAS domain FPK90_07135 PF01740 STAS domain FPK90_07140 PF13581 Histidine kinase-like ATPase domain FPK90_07150 PF00512 His Kinase A (phospho-acceptor) domain FPK90_07150 PF01627 Hpt domain FPK90_07150 PF00672 HAMP domain FPK90_07150 PF17149 Periplasmic sensor domain found in signal transduction proteins FPK90_07150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_07150 PF00072 Response regulator receiver domain FPK90_07155 PF00072 Response regulator receiver domain FPK90_07155 PF13188 PAS domain FPK90_07155 PF08448 PAS fold FPK90_07155 PF00512 His Kinase A (phospho-acceptor) domain FPK90_07155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_07160 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain FPK90_07160 PF04616 Glycosyl hydrolases family 43 FPK90_07165 PF00593 TonB dependent receptor FPK90_07165 PF07715 TonB-dependent Receptor Plug Domain FPK90_07170 PF00085 Thioredoxin FPK90_07175 PF07237 Protein of unknown function (DUF1428) FPK90_07180 PF02702 Osmosensitive K+ channel His kinase sensor domain FPK90_07180 PF13492 GAF domain FPK90_07180 PF00512 His Kinase A (phospho-acceptor) domain FPK90_07180 PF13493 Domain of unknown function (DUF4118) FPK90_07180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_07185 PF01339 CheB methylesterase FPK90_07190 PF01739 CheR methyltransferase, SAM binding domain FPK90_07190 PF03705 CheR methyltransferase, all-alpha domain FPK90_07195 PF00072 Response regulator receiver domain FPK90_07195 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FPK90_07195 PF00672 HAMP domain FPK90_07195 PF00512 His Kinase A (phospho-acceptor) domain FPK90_07195 PF01627 Hpt domain FPK90_07195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_07200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_07200 PF13426 PAS domain FPK90_07200 PF00072 Response regulator receiver domain FPK90_07205 PF00072 Response regulator receiver domain FPK90_07215 PF06964 Alpha-L-arabinofuranosidase C-terminal domain FPK90_07220 PF01263 Aldose 1-epimerase FPK90_07225 PF01578 Cytochrome C assembly protein FPK90_07235 PF00448 SRP54-type protein, GTPase domain FPK90_07235 PF02881 SRP54-type protein, helical bundle domain FPK90_07235 PF02978 Signal peptide binding domain FPK90_07240 PF03060 Nitronate monooxygenase FPK90_07245 PF01063 Amino-transferase class IV FPK90_07250 PF00886 Ribosomal protein S16 FPK90_07255 PF05239 PRC-barrel domain FPK90_07255 PF01782 RimM N-terminal domain FPK90_07260 PF01746 tRNA (Guanine-1)-methyltransferase FPK90_07265 PF01245 Ribosomal protein L19 FPK90_07270 PF01554 MatE FPK90_07285 PF01479 S4 domain FPK90_07290 PF00141 Peroxidase FPK90_07300 PF05192 MutS domain III FPK90_07300 PF01624 MutS domain I FPK90_07300 PF05190 MutS family domain IV FPK90_07300 PF00488 MutS domain V FPK90_07300 PF05188 MutS domain II FPK90_07335 PF01527 Transposase FPK90_07350 PF02837 Glycosyl hydrolases family 2, sugar binding domain FPK90_07350 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FPK90_07350 PF00703 Glycosyl hydrolases family 2 FPK90_07350 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 FPK90_07350 PF16355 Domain of unknown function (DUF4982) FPK90_07355 PF07745 Glycosyl hydrolase family 53 FPK90_07365 PF01381 Helix-turn-helix FPK90_07365 PF09856 Predicted transcriptional regulator (DUF2083) FPK90_07365 PF06114 IrrE N-terminal-like domain FPK90_07370 PF00171 Aldehyde dehydrogenase family FPK90_07375 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FPK90_07375 PF02770 Acyl-CoA dehydrogenase, middle domain FPK90_07375 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FPK90_07380 PF00378 Enoyl-CoA hydratase/isomerase FPK90_07385 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FPK90_07385 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FPK90_07385 PF00378 Enoyl-CoA hydratase/isomerase FPK90_07390 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FPK90_07390 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FPK90_07395 PF01545 Cation efflux family FPK90_07400 PF00378 Enoyl-CoA hydratase/isomerase FPK90_07400 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FPK90_07400 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FPK90_07405 PF04542 Sigma-70 region 2 FPK90_07405 PF08281 Sigma-70, region 4 FPK90_07415 PF13180 PDZ domain FPK90_07420 PF06421 GTP-binding protein LepA C-terminus FPK90_07420 PF00009 Elongation factor Tu GTP binding domain FPK90_07420 PF03144 Elongation factor Tu domain 2 FPK90_07420 PF00679 Elongation factor G C-terminus FPK90_07425 PF10502 Signal peptidase, peptidase S26 FPK90_07435 PF14622 Ribonuclease-III-like FPK90_07435 PF00035 Double-stranded RNA binding motif FPK90_07440 PF07650 KH domain FPK90_07440 PF01926 50S ribosome-binding GTPase FPK90_07445 PF02565 Recombination protein O C terminal FPK90_07445 PF11967 Recombination protein O N terminal FPK90_07455 PF05958 tRNA (Uracil-5-)-methyltransferase FPK90_07470 PF01323 DSBA-like thioredoxin domain FPK90_07475 PF01593 Flavin containing amine oxidoreductase FPK90_07480 PF04244 Deoxyribodipyrimidine photo-lyase-related protein FPK90_07485 PF00933 Glycosyl hydrolase family 3 N terminal domain FPK90_07495 PF01048 Phosphorylase superfamily FPK90_07500 PF00313 'Cold-shock' DNA-binding domain FPK90_07520 PF00271 Helicase conserved C-terminal domain FPK90_07520 PF00270 DEAD/DEAH box helicase FPK90_07520 PF08494 DEAD/H associated FPK90_07525 PF04679 ATP dependent DNA ligase C terminal region FPK90_07525 PF04675 DNA ligase N terminus FPK90_07525 PF01068 ATP dependent DNA ligase domain FPK90_07535 PF04675 DNA ligase N terminus FPK90_07535 PF01068 ATP dependent DNA ligase domain FPK90_07535 PF04679 ATP dependent DNA ligase C terminal region FPK90_07550 PF00072 Response regulator receiver domain FPK90_07550 PF00990 Diguanylate cyclase, GGDEF domain FPK90_07565 PF00108 Thiolase, N-terminal domain FPK90_07565 PF02803 Thiolase, C-terminal domain FPK90_07570 PF12951 Passenger-associated-transport-repeat FPK90_07570 PF03797 Autotransporter beta-domain FPK90_07570 PF00082 Subtilase family FPK90_07575 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FPK90_07575 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FPK90_07590 PF01863 Protein of unknown function DUF45 FPK90_07595 PF07043 Protein of unknown function (DUF1328) FPK90_07605 PF01258 Prokaryotic dksA/traR C4-type zinc finger FPK90_07625 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FPK90_07635 PF08274 PhnA Zinc-Ribbon FPK90_07635 PF03831 PhnA domain FPK90_07645 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FPK90_07650 PF07690 Major Facilitator Superfamily FPK90_07685 PF03706 Lysylphosphatidylglycerol synthase TM region FPK90_07685 PF09924 Uncharacterised conserved protein (DUF2156) FPK90_07695 PF01042 Endoribonuclease L-PSP FPK90_07740 PF04545 Sigma-70, region 4 FPK90_07740 PF04542 Sigma-70 region 2 FPK90_07760 PF04060 Putative Fe-S cluster FPK90_07770 PF01588 Putative tRNA binding domain FPK90_07770 PF09334 tRNA synthetases class I (M) FPK90_07785 PF13732 Domain of unknown function (DUF4162) FPK90_07785 PF00005 ABC transporter FPK90_07790 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FPK90_07795 PF00324 Amino acid permease FPK90_07800 PF02574 Homocysteine S-methyltransferase FPK90_07810 PF02592 Putative vitamin uptake transporter FPK90_07830 PF03551 Transcriptional regulator PadR-like family FPK90_07865 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FPK90_07870 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FPK90_07870 PF07733 Bacterial DNA polymerase III alpha NTPase domain FPK90_07870 PF01336 OB-fold nucleic acid binding domain FPK90_07870 PF02811 PHP domain FPK90_07870 PF14579 Helix-hairpin-helix motif FPK90_07875 PF01351 Ribonuclease HII FPK90_07880 PF02684 Lipid-A-disaccharide synthetase FPK90_07885 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FPK90_07885 PF00132 Bacterial transferase hexapeptide (six repeats) FPK90_07890 PF07977 FabA-like domain FPK90_07895 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FPK90_07895 PF00132 Bacterial transferase hexapeptide (six repeats) FPK90_07905 PF01103 Surface antigen FPK90_07905 PF07244 Surface antigen variable number repeat FPK90_07910 PF17820 PDZ domain FPK90_07910 PF02163 Peptidase family M50 FPK90_07915 PF13288 DXP reductoisomerase C-terminal domain FPK90_07915 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FPK90_07915 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FPK90_07925 PF01255 Putative undecaprenyl diphosphate synthase FPK90_07930 PF01765 Ribosome recycling factor FPK90_07935 PF00696 Amino acid kinase family FPK90_07940 PF00990 Diguanylate cyclase, GGDEF domain FPK90_07940 PF00072 Response regulator receiver domain FPK90_07945 PF00889 Elongation factor TS FPK90_07950 PF00318 Ribosomal protein S2 FPK90_07985 PF00557 Metallopeptidase family M24 FPK90_07990 PF01909 Nucleotidyltransferase domain FPK90_07990 PF01966 HD domain FPK90_07990 PF08335 GlnD PII-uridylyltransferase FPK90_07995 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal FPK90_07995 PF00132 Bacterial transferase hexapeptide (six repeats) FPK90_07995 PF14602 Hexapeptide repeat of succinyl-transferase FPK90_08000 PF03960 ArsC family FPK90_08005 PF01546 Peptidase family M20/M25/M40 FPK90_08005 PF07687 Peptidase dimerisation domain FPK90_08010 PF13537 Glutamine amidotransferase domain FPK90_08010 PF00733 Asparagine synthase FPK90_08020 PF07715 TonB-dependent Receptor Plug Domain FPK90_08020 PF00593 TonB dependent receptor FPK90_08025 PF01804 Penicillin amidase FPK90_08030 PF00210 Ferritin-like domain FPK90_08035 PF05724 Thiopurine S-methyltransferase (TPMT) FPK90_08050 PF03989 DNA gyrase C-terminal domain, beta-propeller FPK90_08050 PF00521 DNA gyrase/topoisomerase IV, subunit A FPK90_08065 PF02321 Outer membrane efflux protein FPK90_08070 PF00529 HlyD membrane-fusion protein of T1SS FPK90_08070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FPK90_08075 PF07690 Major Facilitator Superfamily FPK90_08085 PF01915 Glycosyl hydrolase family 3 C-terminal domain FPK90_08085 PF00933 Glycosyl hydrolase family 3 N terminal domain FPK90_08085 PF14310 Fibronectin type III-like domain FPK90_08095 PF00854 POT family FPK90_08120 PF12802 MarR family FPK90_08125 PF01432 Peptidase family M3 FPK90_08135 PF00255 Glutathione peroxidase FPK90_08140 PF00175 Oxidoreductase NAD-binding domain FPK90_08140 PF00970 Oxidoreductase FAD-binding domain FPK90_08145 PF00005 ABC transporter FPK90_08150 PF05681 Fumarate hydratase (Fumerase) FPK90_08150 PF05683 Fumarase C-terminus FPK90_08160 PF00484 Carbonic anhydrase FPK90_08165 PF02253 Phospholipase A1 FPK90_08175 PF00313 'Cold-shock' DNA-binding domain FPK90_08190 PF00899 ThiF family FPK90_08195 PF01026 TatD related DNase FPK90_08210 PF02770 Acyl-CoA dehydrogenase, middle domain FPK90_08210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FPK90_08210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FPK90_08220 PF00043 Glutathione S-transferase, C-terminal domain FPK90_08220 PF02798 Glutathione S-transferase, N-terminal domain FPK90_08230 PF13537 Glutamine amidotransferase domain FPK90_08230 PF00733 Asparagine synthase FPK90_08235 PF03358 NADPH-dependent FMN reductase FPK90_08240 PF00772 DnaB-like helicase N terminal domain FPK90_08240 PF03796 DnaB-like helicase C terminal domain FPK90_08245 PF00875 DNA photolyase FPK90_08245 PF03441 FAD binding domain of DNA photolyase FPK90_08255 PF00691 OmpA family FPK90_08255 PF05736 OprF membrane domain FPK90_08265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FPK90_08265 PF03466 LysR substrate binding domain FPK90_08280 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FPK90_08285 PF00873 AcrB/AcrD/AcrF family FPK90_08290 PF00106 short chain dehydrogenase FPK90_08295 PF02321 Outer membrane efflux protein FPK90_08300 PF00990 Diguanylate cyclase, GGDEF domain FPK90_08300 PF08448 PAS fold FPK90_08310 PF00990 Diguanylate cyclase, GGDEF domain FPK90_08340 PF00082 Subtilase family FPK90_08345 PF01668 SmpB protein FPK90_08350 PF03364 Polyketide cyclase / dehydrase and lipid transport FPK90_08355 PF03658 RnfH family Ubiquitin FPK90_08360 PF04355 SmpA / OmlA family FPK90_08365 PF01475 Ferric uptake regulator family FPK90_08370 PF02463 RecF/RecN/SMC N terminal domain FPK90_08375 PF01628 HrcA protein C terminal domain FPK90_08375 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding FPK90_08380 PF01025 GrpE FPK90_08385 PF00012 Hsp70 protein FPK90_08390 PF00684 DnaJ central domain FPK90_08390 PF00226 DnaJ domain FPK90_08390 PF01556 DnaJ C terminal domain FPK90_08400 PF08543 Phosphomethylpyrimidine kinase FPK90_08425 PF00664 ABC transporter transmembrane region FPK90_08425 PF03412 Peptidase C39 family FPK90_08425 PF00005 ABC transporter FPK90_08430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FPK90_08430 PF03466 LysR substrate binding domain FPK90_08435 PF00664 ABC transporter transmembrane region FPK90_08435 PF00005 ABC transporter FPK90_08440 PF01205 Uncharacterized protein family UPF0029 FPK90_08445 PF03641 Possible lysine decarboxylase FPK90_08450 PF07992 Pyridine nucleotide-disulphide oxidoreductase FPK90_08450 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FPK90_08455 PF02817 e3 binding domain FPK90_08455 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FPK90_08455 PF00364 Biotin-requiring enzyme FPK90_08460 PF16078 2-oxoglutarate dehydrogenase N-terminus FPK90_08460 PF16870 2-oxoglutarate dehydrogenase C-terminal FPK90_08460 PF00676 Dehydrogenase E1 component FPK90_08460 PF02779 Transketolase, pyrimidine binding domain FPK90_08470 PF08007 Cupin superfamily protein FPK90_08480 PF00206 Lyase FPK90_08480 PF08328 Adenylosuccinate lyase C-terminal FPK90_08490 PF03471 Transporter associated domain FPK90_08490 PF00571 CBS domain FPK90_08490 PF01595 Cyclin M transmembrane N-terminal domain FPK90_08495 PF10415 Fumarase C C-terminus FPK90_08495 PF00206 Lyase FPK90_08520 PF00005 ABC transporter FPK90_08525 PF00392 Bacterial regulatory proteins, gntR family FPK90_08535 PF00255 Glutathione peroxidase FPK90_08540 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FPK90_08540 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FPK90_08545 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FPK90_08545 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FPK90_08545 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FPK90_08550 PF04102 SlyX FPK90_08565 PF00356 Bacterial regulatory proteins, lacI family FPK90_08570 PF07690 Major Facilitator Superfamily FPK90_08575 PF00294 pfkB family carbohydrate kinase FPK90_08585 PF02310 B12 binding domain FPK90_08585 PF02607 B12 binding domain FPK90_08585 PF02965 Vitamin B12 dependent methionine synthase, activation domain FPK90_08585 PF00809 Pterin binding enzyme FPK90_08585 PF02574 Homocysteine S-methyltransferase FPK90_08590 PF00809 Pterin binding enzyme FPK90_08590 PF02574 Homocysteine S-methyltransferase FPK90_08595 PF01209 ubiE/COQ5 methyltransferase family FPK90_08600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FPK90_08600 PF02770 Acyl-CoA dehydrogenase, middle domain FPK90_08600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FPK90_08605 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FPK90_08605 PF02770 Acyl-CoA dehydrogenase, middle domain FPK90_08605 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FPK90_08625 PF17876 Cold shock domain FPK90_08625 PF08461 Ribonuclease R winged-helix domain FPK90_08625 PF08206 Ribonuclease B OB domain FPK90_08625 PF00575 S1 RNA binding domain FPK90_08625 PF00773 RNB domain FPK90_08635 PF00588 SpoU rRNA Methylase family FPK90_08635 PF08032 RNA 2'-O ribose methyltransferase substrate binding FPK90_08640 PF07694 5TMR of 5TMR-LYT FPK90_08640 PF00990 Diguanylate cyclase, GGDEF domain FPK90_08645 PF00929 Exonuclease FPK90_08655 PF01895 PhoU domain FPK90_08660 PF00005 ABC transporter FPK90_08665 PF00528 Binding-protein-dependent transport system inner membrane component FPK90_08670 PF00528 Binding-protein-dependent transport system inner membrane component FPK90_08675 PF12849 PBP superfamily domain FPK90_08680 PF12849 PBP superfamily domain FPK90_08695 PF00484 Carbonic anhydrase FPK90_08700 PF00916 Sulfate permease family FPK90_08700 PF01740 STAS domain FPK90_08705 PF10576 Iron-sulfur binding domain of endonuclease III FPK90_08705 PF00730 HhH-GPD superfamily base excision DNA repair protein FPK90_08705 PF00633 Helix-hairpin-helix motif FPK90_08715 PF00378 Enoyl-CoA hydratase/isomerase FPK90_08720 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FPK90_08720 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FPK90_08725 PF00293 NUDIX domain FPK90_08730 PF00581 Rhodanese-like domain FPK90_08770 PF01170 Putative RNA methylase family UPF0020 FPK90_08770 PF02926 THUMP domain FPK90_08770 PF10672 S-adenosylmethionine-dependent methyltransferase FPK90_08775 PF01513 ATP-NAD kinase FPK90_08800 PF08411 Exonuclease C-terminal FPK90_08800 PF00929 Exonuclease FPK90_08810 PF01494 FAD binding domain FPK90_08815 PF00266 Aminotransferase class-V FPK90_08825 PF06052 3-hydroxyanthranilic acid dioxygenase FPK90_08830 PF00484 Carbonic anhydrase FPK90_08875 PF00072 Response regulator receiver domain FPK90_08875 PF00196 Bacterial regulatory proteins, luxR family FPK90_08895 PF04299 Putative FMN-binding domain FPK90_08915 PF00152 tRNA synthetases class II (D, K and N) FPK90_08915 PF01336 OB-fold nucleic acid binding domain FPK90_08925 PF01521 Iron-sulphur cluster biosynthesis FPK90_08930 PF01250 Ribosomal protein S6 FPK90_08935 PF01084 Ribosomal protein S18 FPK90_08940 PF01281 Ribosomal protein L9, N-terminal domain FPK90_08940 PF03948 Ribosomal protein L9, C-terminal domain FPK90_08945 PF02463 RecF/RecN/SMC N terminal domain FPK90_08950 PF04354 ZipA, C-terminal FtsZ-binding domain FPK90_08960 PF00155 Aminotransferase class I and II FPK90_08965 PF12826 Helix-hairpin-helix motif FPK90_08965 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FPK90_08965 PF03120 NAD-dependent DNA ligase OB-fold domain FPK90_08965 PF01653 NAD-dependent DNA ligase adenylation domain FPK90_08965 PF00533 BRCA1 C Terminus (BRCT) domain FPK90_08970 PF00152 tRNA synthetases class II (D, K and N) FPK90_08985 PF01008 Initiation factor 2 subunit family FPK90_08990 PF03989 DNA gyrase C-terminal domain, beta-propeller FPK90_08990 PF00521 DNA gyrase/topoisomerase IV, subunit A FPK90_08995 PF13360 PQQ-like domain FPK90_09010 PF17392 Urocanase C-terminal domain FPK90_09010 PF01175 Urocanase Rossmann-like domain FPK90_09010 PF17391 Urocanase N-terminal domain FPK90_09020 PF00221 Aromatic amino acid lyase FPK90_09025 PF07969 Amidohydrolase family FPK90_09040 PF07702 UTRA domain FPK90_09040 PF00392 Bacterial regulatory proteins, gntR family FPK90_09070 PF01794 Ferric reductase like transmembrane component FPK90_09075 PF00174 Oxidoreductase molybdopterin binding domain FPK90_09080 PF00266 Aminotransferase class-V FPK90_09085 PF01842 ACT domain FPK90_09085 PF00800 Prephenate dehydratase FPK90_09085 PF01817 Chorismate mutase type II FPK90_09090 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FPK90_09100 PF03544 Gram-negative bacterial TonB protein C-terminal FPK90_09105 PF02403 Seryl-tRNA synthetase N-terminal domain FPK90_09105 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FPK90_09110 PF02525 Flavodoxin-like fold FPK90_09115 PF03466 LysR substrate binding domain FPK90_09115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FPK90_09130 PF00672 HAMP domain FPK90_09130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FPK90_09130 PF02203 Tar ligand binding domain homologue FPK90_09150 PF00072 Response regulator receiver domain FPK90_09150 PF13188 PAS domain FPK90_09150 PF08448 PAS fold FPK90_09150 PF00512 His Kinase A (phospho-acceptor) domain FPK90_09150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_09155 PF01627 Hpt domain FPK90_09155 PF00512 His Kinase A (phospho-acceptor) domain FPK90_09155 PF00672 HAMP domain FPK90_09155 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FPK90_09155 PF00072 Response regulator receiver domain FPK90_09155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_09165 PF06745 KaiC FPK90_09170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_09170 PF13426 PAS domain FPK90_09170 PF00072 Response regulator receiver domain FPK90_09180 PF03918 Cytochrome C biogenesis protein FPK90_09185 PF08534 Redoxin FPK90_09190 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FPK90_09190 PF01578 Cytochrome C assembly protein FPK90_09195 PF03100 CcmE FPK90_09205 PF01578 Cytochrome C assembly protein FPK90_09210 PF00082 Subtilase family FPK90_09220 PF04542 Sigma-70 region 2 FPK90_09220 PF08281 Sigma-70, region 4 FPK90_09235 PF00034 Cytochrome c FPK90_09250 PF05523 WxcM-like, C-terminal FPK90_09270 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FPK90_09275 PF01943 Polysaccharide biosynthesis protein FPK90_09280 PF00535 Glycosyl transferase family 2 FPK90_09295 PF08241 Methyltransferase domain FPK90_09330 PF00005 ABC transporter FPK90_09335 PF00664 ABC transporter transmembrane region FPK90_09335 PF00005 ABC transporter FPK90_09340 PF07690 Major Facilitator Superfamily FPK90_09345 PF00296 Luciferase-like monooxygenase FPK90_09360 PF01595 Cyclin M transmembrane N-terminal domain FPK90_09360 PF00571 CBS domain FPK90_09360 PF03471 Transporter associated domain FPK90_09375 PF01384 Phosphate transporter family FPK90_09390 PF00204 DNA gyrase B FPK90_09390 PF00986 DNA gyrase B subunit, carboxyl terminus FPK90_09390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_09390 PF01751 Toprim domain FPK90_09400 PF06418 CTP synthase N-terminus FPK90_09400 PF00117 Glutamine amidotransferase class-I FPK90_09405 PF00793 DAHP synthetase I family FPK90_09415 PF00113 Enolase, C-terminal TIM barrel domain FPK90_09415 PF03952 Enolase, N-terminal domain FPK90_09420 PF04977 Septum formation initiator FPK90_09425 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FPK90_09430 PF02542 YgbB family FPK90_09435 PF01142 tRNA pseudouridine synthase D (TruD) FPK90_09440 PF01713 Smr domain FPK90_09445 PF01975 Survival protein SurE FPK90_09455 PF09335 SNARE associated Golgi protein FPK90_09460 PF01551 Peptidase family M23 FPK90_09460 PF01476 LysM domain FPK90_09465 PF04430 Protein of unknown function (DUF498/DUF598) FPK90_09470 PF01985 CRS1 / YhbY (CRM) domain FPK90_09475 PF01728 FtsJ-like methyltransferase FPK90_09480 PF01434 Peptidase family M41 FPK90_09480 PF00004 ATPase family associated with various cellular activities (AAA) FPK90_09480 PF06480 FtsH Extracellular FPK90_09480 PF17862 AAA+ lid domain FPK90_09485 PF00809 Pterin binding enzyme FPK90_09495 PF17209 Hfq protein FPK90_09500 PF01926 50S ribosome-binding GTPase FPK90_09500 PF16360 GTP-binding GTPase Middle Region FPK90_09500 PF13167 GTP-binding GTPase N-terminal FPK90_09505 PF02464 Competence-damaged protein FPK90_09510 PF03109 ABC1 family FPK90_09515 PF01726 LexA DNA binding domain FPK90_09515 PF00717 Peptidase S24-like FPK90_09520 PF00154 recA bacterial DNA recombination protein FPK90_09530 PF02631 RecX family FPK90_09535 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FPK90_09535 PF02272 DHHA1 domain FPK90_09535 PF01411 tRNA synthetases class II (A) FPK90_09540 PF02599 Global regulator protein family FPK90_09580 PF04381 Putative exonuclease, RdgC FPK90_09610 PF00145 C-5 cytosine-specific DNA methylase FPK90_09755 PF00182 Chitinase class I FPK90_09835 PF06791 Prophage tail length tape measure protein FPK90_09900 PF13356 Arm DNA-binding domain FPK90_09900 PF00589 Phage integrase family FPK90_09900 PF14659 Phage integrase, N-terminal SAM-like domain FPK90_09910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FPK90_09910 PF08447 PAS fold FPK90_09910 PF13426 PAS domain FPK90_09915 PF02678 Pirin FPK90_09915 PF17954 Quercetinase C-terminal cupin domain FPK90_09920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FPK90_09920 PF03466 LysR substrate binding domain FPK90_09945 PF08543 Phosphomethylpyrimidine kinase FPK90_09960 PF13638 PIN domain FPK90_09960 PF02562 PhoH-like protein FPK90_09965 PF00578 AhpC/TSA family FPK90_09980 PF00701 Dihydrodipicolinate synthetase family FPK90_09990 PF00037 4Fe-4S binding domain FPK90_09990 PF11953 Domain of unknown function (DUF3470) FPK90_09995 PF05035 2-keto-3-deoxy-galactonokinase FPK90_10000 PF08450 SMP-30/Gluconolactonase/LRE-like region FPK90_10005 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FPK90_10005 PF13378 Enolase C-terminal domain-like FPK90_10010 PF01081 KDPG and KHG aldolase FPK90_10020 PF03466 LysR substrate binding domain FPK90_10020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FPK90_10035 PF00942 Cellulose binding domain FPK90_10035 PF03442 Carbohydrate binding domain X2 FPK90_10050 PF16338 Domain of unknown function (DUF4968) FPK90_10050 PF17137 Domain of unknown function (DUF5110) FPK90_10050 PF01055 Glycosyl hydrolases family 31 FPK90_10060 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FPK90_10060 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FPK90_10070 PF00083 Sugar (and other) transporter FPK90_10090 PF01520 N-acetylmuramoyl-L-alanine amidase FPK90_10095 PF02649 Type I GTP cyclohydrolase folE2 FPK90_10105 PF12626 Polymerase A arginine-rich C-terminus FPK90_10105 PF01743 Poly A polymerase head domain FPK90_10105 PF12627 Probable RNA and SrmB- binding site of polymerase A FPK90_10110 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FPK90_10115 PF02548 Ketopantoate hydroxymethyltransferase FPK90_10120 PF02569 Pantoate-beta-alanine ligase FPK90_10125 PF02261 Aspartate decarboxylase FPK90_10130 PF00342 Phosphoglucose isomerase FPK90_10155 PF01915 Glycosyl hydrolase family 3 C-terminal domain FPK90_10155 PF00933 Glycosyl hydrolase family 3 N terminal domain FPK90_10155 PF14310 Fibronectin type III-like domain FPK90_10165 PF00474 Sodium:solute symporter family FPK90_10170 PF01590 GAF domain FPK90_10170 PF00990 Diguanylate cyclase, GGDEF domain FPK90_10170 PF00360 Phytochrome region FPK90_10170 PF00563 EAL domain FPK90_10175 PF00150 Cellulase (glycosyl hydrolase family 5) FPK90_10175 PF02013 Cellulose or protein binding domain FPK90_10180 PF00072 Response regulator receiver domain FPK90_10190 PF04551 GcpE protein FPK90_10195 PF01569 PAP2 superfamily FPK90_10205 PF07690 Major Facilitator Superfamily FPK90_10210 PF01177 Asp/Glu/Hydantoin racemase FPK90_10220 PF00892 EamA-like transporter family FPK90_10225 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FPK90_10225 PF01565 FAD binding domain FPK90_10230 PF01180 Dihydroorotate dehydrogenase FPK90_10250 PF00171 Aldehyde dehydrogenase family FPK90_10310 PF04002 RadC-like JAB domain FPK90_10385 PF02481 DNA recombination-mediator protein A FPK90_10385 PF17782 DprA winged helix domain FPK90_10445 PF02534 Type IV secretory system Conjugative DNA transfer FPK90_10470 PF00664 ABC transporter transmembrane region FPK90_10470 PF00005 ABC transporter FPK90_10470 PF03412 Peptidase C39 family FPK90_10485 PF07690 Major Facilitator Superfamily FPK90_10490 PF02794 RTX toxin acyltransferase family FPK90_10600 PF00535 Glycosyl transferase family 2 FPK90_10605 PF14883 Hypothetical glycosyl hydrolase family 13 FPK90_10605 PF01522 Polysaccharide deacetylase FPK90_10615 PF08479 POTRA domain, ShlB-type FPK90_10615 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB FPK90_10615 PF17287 POTRA domain FPK90_10620 PF05594 Haemagluttinin repeat FPK90_10620 PF13018 Extended Signal Peptide of Type V secretion system FPK90_10620 PF13332 Hemagglutinin repeat FPK90_10620 PF05860 haemagglutination activity domain FPK90_10620 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain FPK90_10685 PF05860 haemagglutination activity domain FPK90_10685 PF13332 Hemagglutinin repeat FPK90_10685 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain FPK90_10685 PF05594 Haemagluttinin repeat FPK90_10685 PF13018 Extended Signal Peptide of Type V secretion system FPK90_10690 PF03073 TspO/MBR family FPK90_10700 PF13840 ACT domain FPK90_10700 PF03447 Homoserine dehydrogenase, NAD binding domain FPK90_10700 PF00742 Homoserine dehydrogenase FPK90_10700 PF01842 ACT domain FPK90_10700 PF00696 Amino acid kinase family FPK90_10705 PF08544 GHMP kinases C terminal FPK90_10705 PF00288 GHMP kinases N terminal domain FPK90_10715 PF14821 Threonine synthase N terminus FPK90_10715 PF00291 Pyridoxal-phosphate dependent enzyme FPK90_10725 PF13545 Crp-like helix-turn-helix domain FPK90_10725 PF00027 Cyclic nucleotide-binding domain FPK90_10730 PF13393 Histidyl-tRNA synthetase FPK90_10730 PF03129 Anticodon binding domain FPK90_10740 PF08029 HisG, C-terminal domain FPK90_10740 PF01634 ATP phosphoribosyltransferase FPK90_10745 PF00815 Histidinol dehydrogenase FPK90_10750 PF00155 Aminotransferase class I and II FPK90_10755 PF00475 Imidazoleglycerol-phosphate dehydratase FPK90_10760 PF00117 Glutamine amidotransferase class-I FPK90_10765 PF00977 Histidine biosynthesis protein FPK90_10770 PF00977 Histidine biosynthesis protein FPK90_10775 PF01502 Phosphoribosyl-AMP cyclohydrolase FPK90_10775 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FPK90_10795 PF03079 ARD/ARD' family FPK90_10800 PF00596 Class II Aldolase and Adducin N-terminal domain FPK90_10805 PF13520 Amino acid permease FPK90_10810 PF13520 Amino acid permease FPK90_10820 PF01842 ACT domain FPK90_10820 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FPK90_10820 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FPK90_10825 PF02913 FAD linked oxidases, C-terminal domain FPK90_10825 PF01565 FAD binding domain FPK90_10845 PF01132 Elongation factor P (EF-P) OB domain FPK90_10845 PF08207 Elongation factor P (EF-P) KOW-like domain FPK90_10845 PF09285 Elongation factor P, C-terminal FPK90_10850 PF00106 short chain dehydrogenase FPK90_10855 PF00682 HMGL-like FPK90_10865 PF00378 Enoyl-CoA hydratase/isomerase FPK90_10875 PF07670 Nucleoside recognition FPK90_10875 PF02421 Ferrous iron transport protein B FPK90_10875 PF07664 Ferrous iron transport protein B C terminus FPK90_10890 PF00155 Aminotransferase class I and II FPK90_10895 PF03473 MOSC domain FPK90_10895 PF03475 3-alpha domain FPK90_10900 PF05173 Dihydrodipicolinate reductase, C-terminus FPK90_10900 PF01113 Dihydrodipicolinate reductase, N-terminus FPK90_10905 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FPK90_10905 PF00117 Glutamine amidotransferase class-I FPK90_10915 PF02142 MGS-like domain FPK90_10915 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FPK90_10915 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FPK90_10920 PF03449 Transcription elongation factor, N-terminal FPK90_10920 PF01272 Transcription elongation factor, GreA/GreB, C-term FPK90_10930 PF01368 DHH family FPK90_10930 PF02272 DHHA1 domain FPK90_10930 PF17768 RecJ OB domain FPK90_10940 PF04397 LytTr DNA-binding domain FPK90_10940 PF00072 Response regulator receiver domain FPK90_10950 PF00152 tRNA synthetases class II (D, K and N) FPK90_10950 PF01336 OB-fold nucleic acid binding domain FPK90_10955 PF00072 Response regulator receiver domain FPK90_10960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_10960 PF00512 His Kinase A (phospho-acceptor) domain FPK90_10960 PF00072 Response regulator receiver domain FPK90_10960 PF01627 Hpt domain FPK90_10965 PF01627 Hpt domain FPK90_10965 PF00072 Response regulator receiver domain FPK90_10965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_10965 PF00512 His Kinase A (phospho-acceptor) domain FPK90_10970 PF00378 Enoyl-CoA hydratase/isomerase FPK90_10975 PF13193 AMP-binding enzyme C-terminal domain FPK90_10975 PF00501 AMP-binding enzyme FPK90_10985 PF00330 Aconitase family (aconitate hydratase) FPK90_10985 PF00694 Aconitase C-terminal domain FPK90_11000 PF00330 Aconitase family (aconitate hydratase) FPK90_11000 PF06434 Aconitate hydratase 2 N-terminus FPK90_11000 PF11791 Aconitate B N-terminal domain FPK90_11005 PF00561 alpha/beta hydrolase fold FPK90_11010 PF00563 EAL domain FPK90_11010 PF03707 Bacterial signalling protein N terminal repeat FPK90_11010 PF00990 Diguanylate cyclase, GGDEF domain FPK90_11015 PF01339 CheB methylesterase FPK90_11015 PF00072 Response regulator receiver domain FPK90_11020 PF03975 CheD chemotactic sensory transduction FPK90_11025 PF03705 CheR methyltransferase, all-alpha domain FPK90_11025 PF01739 CheR methyltransferase, SAM binding domain FPK90_11030 PF00672 HAMP domain FPK90_11030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FPK90_11030 PF02203 Tar ligand binding domain homologue FPK90_11040 PF01584 CheW-like domain FPK90_11045 PF07238 PilZ domain FPK90_11045 PF07317 Flagellar regulator YcgR FPK90_11055 PF02203 Tar ligand binding domain homologue FPK90_11055 PF00672 HAMP domain FPK90_11055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FPK90_11060 PF02203 Tar ligand binding domain homologue FPK90_11060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FPK90_11060 PF00672 HAMP domain FPK90_11065 PF02203 Tar ligand binding domain homologue FPK90_11065 PF00672 HAMP domain FPK90_11065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FPK90_11070 PF00672 HAMP domain FPK90_11070 PF02203 Tar ligand binding domain homologue FPK90_11070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FPK90_11075 PF00672 HAMP domain FPK90_11075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FPK90_11075 PF02203 Tar ligand binding domain homologue FPK90_11085 PF02203 Tar ligand binding domain homologue FPK90_11085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FPK90_11085 PF00672 HAMP domain FPK90_11090 PF02203 Tar ligand binding domain homologue FPK90_11090 PF00672 HAMP domain FPK90_11090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FPK90_11095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FPK90_11095 PF02203 Tar ligand binding domain homologue FPK90_11095 PF00672 HAMP domain FPK90_11100 PF00672 HAMP domain FPK90_11100 PF02203 Tar ligand binding domain homologue FPK90_11100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FPK90_11115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FPK90_11115 PF02203 Tar ligand binding domain homologue FPK90_11115 PF00672 HAMP domain FPK90_11120 PF00672 HAMP domain FPK90_11120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FPK90_11120 PF17200 Single Cache domain 2 FPK90_11135 PF01627 Hpt domain FPK90_11135 PF01584 CheW-like domain FPK90_11135 PF09078 CheY binding FPK90_11135 PF02895 Signal transducing histidine kinase, homodimeric domain FPK90_11135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_11140 PF00072 Response regulator receiver domain FPK90_11150 PF01584 CheW-like domain FPK90_11155 PF13614 AAA domain FPK90_11160 PF13677 Membrane MotB of proton-channel complex MotA/MotB FPK90_11160 PF00691 OmpA family FPK90_11165 PF01618 MotA/TolQ/ExbB proton channel family FPK90_11265 PF13186 Iron-sulfur cluster-binding domain FPK90_11265 PF04055 Radical SAM superfamily FPK90_11280 PF07194 P2 response regulator binding domain FPK90_11280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_11280 PF02895 Signal transducing histidine kinase, homodimeric domain FPK90_11280 PF01584 CheW-like domain FPK90_11280 PF01627 Hpt domain FPK90_11285 PF04344 Chemotaxis phosphatase, CheZ FPK90_11290 PF00072 Response regulator receiver domain FPK90_11295 PF04545 Sigma-70, region 4 FPK90_11295 PF04542 Sigma-70 region 2 FPK90_11295 PF04539 Sigma-70 region 3 FPK90_11300 PF10609 NUBPL iron-transfer P-loop NTPase FPK90_11305 PF00448 SRP54-type protein, GTPase domain FPK90_11310 PF00771 FHIPEP family FPK90_11315 PF01312 FlhB HrpN YscU SpaS Family FPK90_11320 PF00563 EAL domain FPK90_11320 PF00990 Diguanylate cyclase, GGDEF domain FPK90_11320 PF03707 Bacterial signalling protein N terminal repeat FPK90_11325 PF13188 PAS domain FPK90_11325 PF00990 Diguanylate cyclase, GGDEF domain FPK90_11325 PF03707 Bacterial signalling protein N terminal repeat FPK90_11325 PF00563 EAL domain FPK90_11335 PF00563 EAL domain FPK90_11335 PF03707 Bacterial signalling protein N terminal repeat FPK90_11335 PF00990 Diguanylate cyclase, GGDEF domain FPK90_11335 PF13188 PAS domain FPK90_11340 PF01311 Bacterial export proteins, family 1 FPK90_11345 PF01313 Bacterial export proteins, family 3 FPK90_11350 PF00813 FliP family FPK90_11355 PF04347 Flagellar biosynthesis protein, FliO FPK90_11360 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FPK90_11365 PF02154 Flagellar motor switch protein FliM FPK90_11365 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FPK90_11385 PF18269 T3SS EscN ATPase C-terminal domain FPK90_11385 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FPK90_11395 PF01706 FliG C-terminal domain FPK90_11395 PF14842 FliG N-terminal domain FPK90_11395 PF14841 FliG middle domain FPK90_11400 PF01514 Secretory protein of YscJ/FliF family FPK90_11400 PF08345 Flagellar M-ring protein C-terminal FPK90_11405 PF02049 Flagellar hook-basal body complex protein FliE FPK90_11410 PF00535 Glycosyl transferase family 2 FPK90_11410 PF00534 Glycosyl transferases group 1 FPK90_11415 PF04230 Polysaccharide pyruvyl transferase FPK90_11450 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FPK90_11450 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FPK90_11460 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FPK90_11465 PF00158 Sigma-54 interaction domain FPK90_11465 PF02954 Bacterial regulatory protein, Fis family FPK90_11465 PF00072 Response regulator receiver domain FPK90_11470 PF00072 Response regulator receiver domain FPK90_11470 PF01339 CheB methylesterase FPK90_11475 PF04552 Sigma-54, DNA binding domain FPK90_11475 PF04963 Sigma-54 factor, core binding domain FPK90_11475 PF00309 Sigma-54 factor, Activator interacting domain (AID) FPK90_11480 PF00196 Bacterial regulatory proteins, luxR family FPK90_11480 PF00072 Response regulator receiver domain FPK90_11495 PF02561 Flagellar protein FliS FPK90_11500 PF02465 Flagellar hook-associated protein 2 N-terminus FPK90_11500 PF07195 Flagellar hook-associated protein 2 C-terminus FPK90_11500 PF07196 Flagellin hook IN motif FPK90_11505 PF00669 Bacterial flagellin N-terminal helical region FPK90_11505 PF00700 Bacterial flagellin C-terminal helical region FPK90_11510 PF00700 Bacterial flagellin C-terminal helical region FPK90_11510 PF00669 Bacterial flagellin N-terminal helical region FPK90_11515 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FPK90_11515 PF07196 Flagellin hook IN motif FPK90_11520 PF10135 Rod binding protein FPK90_11520 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FPK90_11525 PF02119 Flagellar P-ring protein FPK90_11530 PF02107 Flagellar L-ring protein FPK90_11535 PF00460 Flagella basal body rod protein FPK90_11535 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FPK90_11545 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FPK90_11545 PF00460 Flagella basal body rod protein FPK90_11550 PF07559 Flagellar basal body protein FlaE FPK90_11550 PF00460 Flagella basal body rod protein FPK90_11550 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FPK90_11555 PF03963 Flagellar hook capping protein - N-terminal region FPK90_11560 PF00460 Flagella basal body rod protein FPK90_11560 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FPK90_11570 PF00072 Response regulator receiver domain FPK90_11570 PF01584 CheW-like domain FPK90_11590 PF00989 PAS fold FPK90_11590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_11590 PF13188 PAS domain FPK90_11590 PF13426 PAS domain FPK90_11590 PF00512 His Kinase A (phospho-acceptor) domain FPK90_11595 PF00990 Diguanylate cyclase, GGDEF domain FPK90_11595 PF03707 Bacterial signalling protein N terminal repeat FPK90_11595 PF00563 EAL domain FPK90_11600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_11600 PF07730 Histidine kinase FPK90_11605 PF03707 Bacterial signalling protein N terminal repeat FPK90_11605 PF00990 Diguanylate cyclase, GGDEF domain FPK90_11605 PF00563 EAL domain FPK90_11615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FPK90_11615 PF00672 HAMP domain FPK90_11615 PF12729 Four helix bundle sensory module for signal transduction FPK90_11620 PF04356 Protein of unknown function (DUF489) FPK90_11630 PF00293 NUDIX domain FPK90_11635 PF02617 ATP-dependent Clp protease adaptor protein ClpS FPK90_11640 PF00004 ATPase family associated with various cellular activities (AAA) FPK90_11640 PF07724 AAA domain (Cdc48 subfamily) FPK90_11640 PF10431 C-terminal, D2-small domain, of ClpB protein FPK90_11640 PF02861 Clp amino terminal domain, pathogenicity island component FPK90_11640 PF17871 AAA lid domain FPK90_11645 PF01176 Translation initiation factor 1A / IF-1 FPK90_11650 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FPK90_11660 PF07992 Pyridine nucleotide-disulphide oxidoreductase FPK90_11665 PF01580 FtsK/SpoIIIE family FPK90_11665 PF09397 Ftsk gamma domain FPK90_11665 PF17854 FtsK alpha domain FPK90_11665 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FPK90_11675 PF03548 Outer membrane lipoprotein carrier protein LolA FPK90_11685 PF16193 AAA C-terminal domain FPK90_11685 PF00004 ATPase family associated with various cellular activities (AAA) FPK90_11685 PF12002 MgsA AAA+ ATPase C terminal FPK90_11690 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FPK90_11700 PF02803 Thiolase, C-terminal domain FPK90_11700 PF00108 Thiolase, N-terminal domain FPK90_11705 PF00378 Enoyl-CoA hydratase/isomerase FPK90_11705 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FPK90_11705 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FPK90_11715 PF00334 Nucleoside diphosphate kinase FPK90_11720 PF04055 Radical SAM superfamily FPK90_11730 PF13464 Domain of unknown function (DUF4115) FPK90_11740 PF01011 PQQ enzyme repeat FPK90_11740 PF13360 PQQ-like domain FPK90_11745 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FPK90_11745 PF01926 50S ribosome-binding GTPase FPK90_11750 PF03454 MoeA C-terminal region (domain IV) FPK90_11750 PF03453 MoeA N-terminal region (domain I and II) FPK90_11750 PF00994 Probable molybdopterin binding domain FPK90_11755 PF00899 ThiF family FPK90_11785 PF08240 Alcohol dehydrogenase GroES-like domain FPK90_11785 PF13823 Alcohol dehydrogenase GroES-associated FPK90_11785 PF00107 Zinc-binding dehydrogenase FPK90_11795 PF03372 Endonuclease/Exonuclease/phosphatase family FPK90_11805 PF03454 MoeA C-terminal region (domain IV) FPK90_11805 PF03453 MoeA N-terminal region (domain I and II) FPK90_11805 PF00994 Probable molybdopterin binding domain FPK90_11810 PF12804 MobA-like NTP transferase domain FPK90_11820 PF10414 Sirohaem synthase dimerisation region FPK90_11820 PF14824 Sirohaem biosynthesis protein central FPK90_11820 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FPK90_11850 PF05974 Domain of unknown function (DUF892) FPK90_11870 PF08448 PAS fold FPK90_11870 PF08447 PAS fold FPK90_11870 PF00990 Diguanylate cyclase, GGDEF domain FPK90_11870 PF00563 EAL domain FPK90_11875 PF12951 Passenger-associated-transport-repeat FPK90_11880 PF00072 Response regulator receiver domain FPK90_11880 PF00196 Bacterial regulatory proteins, luxR family FPK90_11885 PF08448 PAS fold FPK90_11885 PF00512 His Kinase A (phospho-acceptor) domain FPK90_11885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_11885 PF00072 Response regulator receiver domain FPK90_11885 PF13426 PAS domain FPK90_11895 PF00873 AcrB/AcrD/AcrF family FPK90_11900 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FPK90_11910 PF03797 Autotransporter beta-domain FPK90_11910 PF00082 Subtilase family FPK90_11920 PF13492 GAF domain FPK90_11920 PF07694 5TMR of 5TMR-LYT FPK90_11920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_11920 PF06580 Histidine kinase FPK90_11925 PF00072 Response regulator receiver domain FPK90_11925 PF04397 LytTr DNA-binding domain FPK90_11935 PF00144 Beta-lactamase FPK90_11945 PF07995 Glucose / Sorbosone dehydrogenase FPK90_11950 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FPK90_11960 PF09335 SNARE associated Golgi protein FPK90_11965 PF01494 FAD binding domain FPK90_11975 PF03621 MbtH-like protein FPK90_11980 PF00975 Thioesterase domain FPK90_12025 PF17091 Inovirus G7P protein FPK90_12070 PF02810 SEC-C motif FPK90_12070 PF07517 SecA DEAD-like domain FPK90_12070 PF01043 SecA preprotein cross-linking domain FPK90_12070 PF07516 SecA Wing and Scaffold domain FPK90_12085 PF07517 SecA DEAD-like domain FPK90_12085 PF02810 SEC-C motif FPK90_12085 PF07516 SecA Wing and Scaffold domain FPK90_12085 PF01043 SecA preprotein cross-linking domain FPK90_12095 PF00106 short chain dehydrogenase FPK90_12100 PF00732 GMC oxidoreductase FPK90_12100 PF05199 GMC oxidoreductase FPK90_12105 PF12697 Alpha/beta hydrolase family FPK90_12105 PF08241 Methyltransferase domain FPK90_12155 PF01106 NifU-like domain FPK90_12160 PF01329 Pterin 4 alpha carbinolamine dehydratase FPK90_12170 PF02535 ZIP Zinc transporter FPK90_12175 PF11737 Protein of unknown function (DUF3300) FPK90_12180 PF01479 S4 domain FPK90_12180 PF00849 RNA pseudouridylate synthase FPK90_12185 PF10150 Ribonuclease E/G family FPK90_12185 PF00575 S1 RNA binding domain FPK90_12185 PF12111 Polyribonucleotide phosphorylase C terminal FPK90_12190 PF00072 Response regulator receiver domain FPK90_12190 PF00196 Bacterial regulatory proteins, luxR family FPK90_12205 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FPK90_12215 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FPK90_12215 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FPK90_12215 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FPK90_12225 PF01648 4'-phosphopantetheinyl transferase superfamily FPK90_12225 PF17837 4'-phosphopantetheinyl transferase N-terminal domain FPK90_12230 PF00550 Phosphopantetheine attachment site FPK90_12230 PF13193 AMP-binding enzyme C-terminal domain FPK90_12230 PF00668 Condensation domain FPK90_12230 PF00501 AMP-binding enzyme FPK90_12230 PF00975 Thioesterase domain FPK90_12235 PF00501 AMP-binding enzyme FPK90_12235 PF13193 AMP-binding enzyme C-terminal domain FPK90_12235 PF00668 Condensation domain FPK90_12235 PF00202 Aminotransferase class-III FPK90_12235 PF16197 Ketoacyl-synthetase C-terminal extension FPK90_12235 PF00550 Phosphopantetheine attachment site FPK90_12235 PF02801 Beta-ketoacyl synthase, C-terminal domain FPK90_12235 PF00109 Beta-ketoacyl synthase, N-terminal domain FPK90_12270 PF07519 Tannase and feruloyl esterase FPK90_12280 PF13195 Protein of unknown function (DUF4011) FPK90_12280 PF13087 AAA domain FPK90_12280 PF13086 AAA domain FPK90_12280 PF13087 AAA domain FPK90_12280 PF13195 Protein of unknown function (DUF4011) FPK90_12280 PF13086 AAA domain FPK90_12305 PF10544 T5orf172 domain FPK90_12345 PF13614 AAA domain FPK90_12380 PF00436 Single-strand binding protein family FPK90_12385 PF01751 Toprim domain FPK90_12385 PF01131 DNA topoisomerase FPK90_12395 PF00145 C-5 cytosine-specific DNA methylase FPK90_12410 PF02021 Uncharacterised protein family UPF0102 FPK90_12575 PF03466 LysR substrate binding domain FPK90_12575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FPK90_12580 PF07690 Major Facilitator Superfamily FPK90_12595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FPK90_12595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FPK90_12595 PF02770 Acyl-CoA dehydrogenase, middle domain FPK90_12600 PF00132 Bacterial transferase hexapeptide (six repeats) FPK90_12605 PF00293 NUDIX domain FPK90_12605 PF09297 NADH pyrophosphatase zinc ribbon domain FPK90_12615 PF07690 Major Facilitator Superfamily FPK90_12685 PF04717 Type VI secretion system, phage-baseplate injector FPK90_12705 PF04717 Type VI secretion system, phage-baseplate injector FPK90_12705 PF16671 Actin cross-linking domain FPK90_12715 PF17871 AAA lid domain FPK90_12715 PF00004 ATPase family associated with various cellular activities (AAA) FPK90_12715 PF10431 C-terminal, D2-small domain, of ClpB protein FPK90_12715 PF07724 AAA domain (Cdc48 subfamily) FPK90_12770 PF04717 Type VI secretion system, phage-baseplate injector FPK90_12770 PF16671 Actin cross-linking domain FPK90_12785 PF04717 Type VI secretion system, phage-baseplate injector FPK90_12785 PF16671 Actin cross-linking domain FPK90_12840 PF04717 Type VI secretion system, phage-baseplate injector FPK90_12850 PF00691 OmpA family FPK90_12850 PF04972 BON domain FPK90_12900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FPK90_12900 PF03466 LysR substrate binding domain FPK90_12915 PF13356 Arm DNA-binding domain FPK90_12915 PF00589 Phage integrase family FPK90_12925 PF01066 CDP-alcohol phosphatidyltransferase FPK90_12930 PF01541 GIY-YIG catalytic domain FPK90_12930 PF08459 UvrC Helix-hairpin-helix N-terminal FPK90_12930 PF02151 UvrB/uvrC motif FPK90_12940 PF01451 Low molecular weight phosphotyrosine protein phosphatase FPK90_12945 PF02348 Cytidylyltransferase FPK90_12950 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FPK90_12955 PF00005 ABC transporter FPK90_12955 PF00664 ABC transporter transmembrane region FPK90_12965 PF01618 MotA/TolQ/ExbB proton channel family FPK90_12970 PF03772 Competence protein FPK90_12970 PF00753 Metallo-beta-lactamase superfamily FPK90_12980 PF00005 ABC transporter FPK90_12985 PF02687 FtsX-like permease family FPK90_12985 PF12704 MacB-like periplasmic core domain FPK90_12995 PF03937 Flavinator of succinate dehydrogenase FPK90_13000 PF13085 2Fe-2S iron-sulfur cluster binding domain FPK90_13010 PF00890 FAD binding domain FPK90_13010 PF02910 Fumarate reductase flavoprotein C-term FPK90_13015 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FPK90_13020 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FPK90_13035 PF00005 ABC transporter FPK90_13035 PF17912 MalK OB fold domain FPK90_13040 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FPK90_13040 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FPK90_13045 PF02685 Glucokinase FPK90_13050 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FPK90_13055 PF00920 Dehydratase family FPK90_13060 PF01081 KDPG and KHG aldolase FPK90_13070 PF00873 AcrB/AcrD/AcrF family FPK90_13075 PF00873 AcrB/AcrD/AcrF family FPK90_13080 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FPK90_13090 PF00034 Cytochrome c FPK90_13135 PF00072 Response regulator receiver domain FPK90_13135 PF09308 LuxQ, periplasmic FPK90_13135 PF00512 His Kinase A (phospho-acceptor) domain FPK90_13135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_13140 PF17674 HHH domain FPK90_13140 PF16921 Tex protein YqgF-like domain FPK90_13140 PF00575 S1 RNA binding domain FPK90_13140 PF09371 Tex-like protein N-terminal domain FPK90_13150 PF00355 Rieske [2Fe-2S] domain FPK90_13150 PF01266 FAD dependent oxidoreductase FPK90_13165 PF00561 alpha/beta hydrolase fold FPK90_13175 PF01066 CDP-alcohol phosphatidyltransferase FPK90_13195 PF03618 Kinase/pyrophosphorylase FPK90_13200 PF00391 PEP-utilising enzyme, mobile domain FPK90_13200 PF02896 PEP-utilising enzyme, TIM barrel domain FPK90_13200 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FPK90_13205 PF00924 Mechanosensitive ion channel FPK90_13205 PF05552 Conserved TM helix FPK90_13210 PF00929 Exonuclease FPK90_13215 PF14437 MafB19-like deaminase FPK90_13220 PF01325 Iron dependent repressor, N-terminal DNA binding domain FPK90_13220 PF02742 Iron dependent repressor, metal binding and dimerisation domain FPK90_13225 PF01566 Natural resistance-associated macrophage protein FPK90_13230 PF00561 alpha/beta hydrolase fold FPK90_13245 PF05977 Transmembrane secretion effector FPK90_13250 PF07969 Amidohydrolase family FPK90_13260 PF00857 Isochorismatase family FPK90_13275 PF00196 Bacterial regulatory proteins, luxR family FPK90_13275 PF00072 Response regulator receiver domain FPK90_13295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FPK90_13295 PF03466 LysR substrate binding domain FPK90_13300 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus FPK90_13300 PF00361 Proton-conducting membrane transporter FPK90_13300 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FPK90_13305 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) FPK90_13310 PF00958 GMP synthase C terminal domain FPK90_13310 PF00117 Glutamine amidotransferase class-I FPK90_13310 PF02540 NAD synthase FPK90_13315 PF00478 IMP dehydrogenase / GMP reductase domain FPK90_13315 PF00571 CBS domain FPK90_13320 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FPK90_13320 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FPK90_13330 PF02254 TrkA-N domain FPK90_13330 PF00999 Sodium/hydrogen exchanger family FPK90_13340 PF00483 Nucleotidyl transferase FPK90_13345 PF02719 Polysaccharide biosynthesis protein FPK90_13350 PF00953 Glycosyl transferase family 4 FPK90_13355 PF18073 Rubredoxin metal binding domain FPK90_13365 PF00216 Bacterial DNA-binding protein FPK90_13370 PF00575 S1 RNA binding domain FPK90_13375 PF02224 Cytidylate kinase FPK90_13380 PF00444 Ribosomal protein L36 FPK90_13395 PF04371 Porphyromonas-type peptidyl-arginine deiminase FPK90_13400 PF00795 Carbon-nitrogen hydrolase FPK90_13425 PF00528 Binding-protein-dependent transport system inner membrane component FPK90_13430 PF00528 Binding-protein-dependent transport system inner membrane component FPK90_13450 PF00356 Bacterial regulatory proteins, lacI family FPK90_13460 PF03795 YCII-related domain FPK90_13465 PF02616 Segregation and condensation protein ScpA FPK90_13470 PF04079 Segregation and condensation complex subunit ScpB FPK90_13475 PF01479 S4 domain FPK90_13475 PF00849 RNA pseudouridylate synthase FPK90_13490 PF00795 Carbon-nitrogen hydrolase FPK90_13495 PF00155 Aminotransferase class I and II FPK90_13500 PF00005 ABC transporter FPK90_13505 PF03379 CcmB protein FPK90_13510 PF01578 Cytochrome C assembly protein FPK90_13520 PF03100 CcmE FPK90_13525 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FPK90_13525 PF01578 Cytochrome C assembly protein FPK90_13530 PF08534 Redoxin FPK90_13535 PF03918 Cytochrome C biogenesis protein FPK90_13545 PF00561 alpha/beta hydrolase fold FPK90_13550 PF00313 'Cold-shock' DNA-binding domain FPK90_13555 PF00005 ABC transporter FPK90_13555 PF00664 ABC transporter transmembrane region FPK90_13560 PF00664 ABC transporter transmembrane region FPK90_13560 PF00005 ABC transporter FPK90_13565 PF01654 Cytochrome bd terminal oxidase subunit I FPK90_13570 PF02322 Cytochrome bd terminal oxidase subunit II FPK90_13590 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FPK90_13590 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain FPK90_13600 PF00171 Aldehyde dehydrogenase family FPK90_13605 PF01472 PUA domain FPK90_13605 PF00696 Amino acid kinase family FPK90_13615 PF00206 Lyase FPK90_13620 PF01118 Semialdehyde dehydrogenase, NAD binding domain FPK90_13630 PF00696 Amino acid kinase family FPK90_13630 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase FPK90_13645 PF00764 Arginosuccinate synthase FPK90_13650 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FPK90_13650 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FPK90_13660 PF09190 DALR domain FPK90_13660 PF01406 tRNA synthetases class I (C) catalytic domain FPK90_13665 PF02657 Fe-S metabolism associated domain FPK90_13675 PF01258 Prokaryotic dksA/traR C4-type zinc finger FPK90_13680 PF01809 Putative membrane protein insertion efficiency factor FPK90_13685 PF01979 Amidohydrolase family FPK90_13690 PF08460 Bacterial SH3 domain FPK90_13690 PF01551 Peptidase family M23 FPK90_13710 PF06751 Ethanolamine ammonia lyase large subunit (EutB) FPK90_13715 PF05985 Ethanolamine ammonia-lyase light chain (EutC) FPK90_13725 PF00753 Metallo-beta-lactamase superfamily FPK90_13765 PF00295 Glycosyl hydrolases family 28 FPK90_13775 PF13419 Haloacid dehalogenase-like hydrolase FPK90_13785 PF01979 Amidohydrolase family FPK90_13795 PF09285 Elongation factor P, C-terminal FPK90_13795 PF08207 Elongation factor P (EF-P) KOW-like domain FPK90_13795 PF01132 Elongation factor P (EF-P) OB domain FPK90_13800 PF04055 Radical SAM superfamily FPK90_13805 PF00563 EAL domain FPK90_13805 PF03707 Bacterial signalling protein N terminal repeat FPK90_13805 PF13188 PAS domain FPK90_13805 PF00990 Diguanylate cyclase, GGDEF domain FPK90_13815 PF00588 SpoU rRNA Methylase family FPK90_13820 PF00459 Inositol monophosphatase family FPK90_13825 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FPK90_13825 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FPK90_13830 PF00545 ribonuclease FPK90_13850 PF00271 Helicase conserved C-terminal domain FPK90_13850 PF00270 DEAD/DEAH box helicase FPK90_13850 PF03880 DbpA RNA binding domain FPK90_13855 PF00156 Phosphoribosyl transferase domain FPK90_13860 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FPK90_13865 PF00135 Carboxylesterase family FPK90_13870 PF14497 Glutathione S-transferase, C-terminal domain FPK90_13870 PF02798 Glutathione S-transferase, N-terminal domain FPK90_13875 PF00313 'Cold-shock' DNA-binding domain FPK90_13880 PF07152 YaeQ protein FPK90_13890 PF00563 EAL domain FPK90_13890 PF00990 Diguanylate cyclase, GGDEF domain FPK90_13890 PF00072 Response regulator receiver domain FPK90_13895 PF01435 Peptidase family M48 FPK90_13900 PF00749 tRNA synthetases class I (E and Q), catalytic domain FPK90_13905 PF00106 short chain dehydrogenase FPK90_13910 PF05233 PHB accumulation regulatory domain FPK90_13910 PF07879 PHB/PHA accumulation regulator DNA-binding domain FPK90_13930 PF01119 DNA mismatch repair protein, C-terminal domain FPK90_13930 PF08676 MutL C terminal dimerisation domain FPK90_13935 PF01520 N-acetylmuramoyl-L-alanine amidase FPK90_13935 PF11741 AMIN domain FPK90_13940 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FPK90_13945 PF03853 YjeF-related protein N-terminus FPK90_13945 PF01256 Carbohydrate kinase FPK90_13950 PF08331 Domain of unknown function (DUF1730) FPK90_13955 PF13742 OB-fold nucleic acid binding domain FPK90_13955 PF02601 Exonuclease VII, large subunit FPK90_13965 PF03781 Sulfatase-modifying factor enzyme 1 FPK90_13980 PF01612 3'-5' exonuclease FPK90_13980 PF00570 HRDC domain FPK90_13985 PF01068 ATP dependent DNA ligase domain FPK90_13985 PF04679 ATP dependent DNA ligase C terminal region FPK90_13985 PF13298 DNA polymerase Ligase (LigD) FPK90_14010 PF01584 CheW-like domain FPK90_14015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FPK90_14015 PF00672 HAMP domain FPK90_14015 PF02743 Cache domain FPK90_14020 PF02245 Methylpurine-DNA glycosylase (MPG) FPK90_14025 PF00270 DEAD/DEAH box helicase FPK90_14025 PF00271 Helicase conserved C-terminal domain FPK90_14025 PF08494 DEAD/H associated FPK90_14045 PF04386 Stringent starvation protein B FPK90_14050 PF02798 Glutathione S-transferase, N-terminal domain FPK90_14050 PF00043 Glutathione S-transferase, C-terminal domain FPK90_14055 PF02167 Cytochrome C1 family FPK90_14060 PF00032 Cytochrome b(C-terminal)/b6/petD FPK90_14060 PF00033 Cytochrome b/b6/petB FPK90_14065 PF00355 Rieske [2Fe-2S] domain FPK90_14065 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FPK90_14075 PF01464 Transglycosylase SLT domain FPK90_14090 PF01938 TRAM domain FPK90_14090 PF00919 Uncharacterized protein family UPF0004 FPK90_14090 PF04055 Radical SAM superfamily FPK90_14100 PF02562 PhoH-like protein FPK90_14110 PF02130 Uncharacterized protein family UPF0054 FPK90_14120 PF00571 CBS domain FPK90_14120 PF03471 Transporter associated domain FPK90_14135 PF00171 Aldehyde dehydrogenase family FPK90_14140 PF00528 Binding-protein-dependent transport system inner membrane component FPK90_14145 PF00528 Binding-protein-dependent transport system inner membrane component FPK90_14155 PF02321 Outer membrane efflux protein FPK90_14160 PF07690 Major Facilitator Superfamily FPK90_14165 PF13533 Biotin-lipoyl like FPK90_14170 PF13416 Bacterial extracellular solute-binding protein FPK90_14175 PF00202 Aminotransferase class-III FPK90_14180 PF00120 Glutamine synthetase, catalytic domain FPK90_14190 PF00120 Glutamine synthetase, catalytic domain FPK90_14195 PF01266 FAD dependent oxidoreductase FPK90_14200 PF00990 Diguanylate cyclase, GGDEF domain FPK90_14200 PF00072 Response regulator receiver domain FPK90_14205 PF01814 Hemerythrin HHE cation binding domain FPK90_14210 PF00083 Sugar (and other) transporter FPK90_14210 PF07690 Major Facilitator Superfamily FPK90_14225 PF00384 Molybdopterin oxidoreductase FPK90_14230 PF02634 FdhD/NarQ family FPK90_14235 PF07690 Major Facilitator Superfamily FPK90_14250 PF00202 Aminotransferase class-III FPK90_14260 PF04286 Protein of unknown function (DUF445) FPK90_14265 PF00672 HAMP domain FPK90_14265 PF00072 Response regulator receiver domain FPK90_14265 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FPK90_14265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_14265 PF00512 His Kinase A (phospho-acceptor) domain FPK90_14265 PF01627 Hpt domain FPK90_14270 PF00072 Response regulator receiver domain FPK90_14275 PF07690 Major Facilitator Superfamily FPK90_14290 PF05088 Bacterial NAD-glutamate dehydrogenase FPK90_14300 PF00529 HlyD membrane-fusion protein of T1SS FPK90_14300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FPK90_14305 PF00873 AcrB/AcrD/AcrF family FPK90_14315 PF00356 Bacterial regulatory proteins, lacI family FPK90_14320 PF00381 PTS HPr component phosphorylation site FPK90_14320 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FPK90_14320 PF00391 PEP-utilising enzyme, mobile domain FPK90_14320 PF05524 PEP-utilising enzyme, N-terminal FPK90_14320 PF02896 PEP-utilising enzyme, TIM barrel domain FPK90_14325 PF00294 pfkB family carbohydrate kinase FPK90_14330 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FPK90_14340 PF01593 Flavin containing amine oxidoreductase FPK90_14350 PF02355 Protein export membrane protein FPK90_14350 PF07549 SecD/SecF GG Motif FPK90_14355 PF07549 SecD/SecF GG Motif FPK90_14355 PF13721 SecD export protein N-terminal TM region FPK90_14355 PF02355 Protein export membrane protein FPK90_14360 PF02699 Preprotein translocase subunit FPK90_14365 PF01702 Queuine tRNA-ribosyltransferase FPK90_14370 PF02547 Queuosine biosynthesis protein FPK90_14415 PF02927 Cellulase N-terminal ig-like domain FPK90_14415 PF00759 Glycosyl hydrolase family 9 FPK90_14425 PF00037 4Fe-4S binding domain FPK90_14440 PF01467 Cytidylyltransferase-like FPK90_14450 PF00183 Hsp90 protein FPK90_14450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_14505 PF07715 TonB-dependent Receptor Plug Domain FPK90_14505 PF00593 TonB dependent receptor FPK90_14515 PF04616 Glycosyl hydrolases family 43 FPK90_14520 PF07532 Bacterial Ig-like domain (group 4) FPK90_14550 PF09286 Pro-kumamolisin, activation domain FPK90_14550 PF00082 Subtilase family FPK90_14580 PF13520 Amino acid permease FPK90_14595 PF00557 Metallopeptidase family M24 FPK90_14595 PF01321 Creatinase/Prolidase N-terminal domain FPK90_14600 PF00171 Aldehyde dehydrogenase family FPK90_14605 PF00701 Dihydrodipicolinate synthetase family FPK90_14610 PF07992 Pyridine nucleotide-disulphide oxidoreductase FPK90_14610 PF04324 BFD-like [2Fe-2S] binding domain FPK90_14620 PF01266 FAD dependent oxidoreductase FPK90_14625 PF05544 Proline racemase FPK90_14635 PF00448 SRP54-type protein, GTPase domain FPK90_14635 PF02881 SRP54-type protein, helical bundle domain FPK90_14645 PF10576 Iron-sulfur binding domain of endonuclease III FPK90_14645 PF00633 Helix-hairpin-helix motif FPK90_14645 PF00730 HhH-GPD superfamily base excision DNA repair protein FPK90_14645 PF14815 NUDIX domain FPK90_14650 PF04362 Bacterial Fe(2+) trafficking FPK90_14655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_14655 PF13426 PAS domain FPK90_14655 PF00072 Response regulator receiver domain FPK90_14685 PF08212 Lipocalin-like domain FPK90_14700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FPK90_14700 PF12806 Acetyl-CoA dehydrogenase C-terminal like FPK90_14700 PF02770 Acyl-CoA dehydrogenase, middle domain FPK90_14700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FPK90_14710 PF02780 Transketolase, C-terminal domain FPK90_14710 PF02779 Transketolase, pyrimidine binding domain FPK90_14710 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FPK90_14730 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family FPK90_14735 PF16123 Hydroxyacylglutathione hydrolase C-terminus FPK90_14735 PF00753 Metallo-beta-lactamase superfamily FPK90_14740 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FPK90_14740 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FPK90_14755 PF03808 Glycosyl transferase WecB/TagA/CpsF family FPK90_14770 PF14667 Polysaccharide biosynthesis C-terminal domain FPK90_14780 PF00534 Glycosyl transferases group 1 FPK90_14780 PF13439 Glycosyltransferase Family 4 FPK90_14800 PF02397 Bacterial sugar transferase FPK90_14820 PF13411 MerR HTH family regulatory protein FPK90_14825 PF00216 Bacterial DNA-binding protein FPK90_14830 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FPK90_14830 PF03483 B3/4 domain FPK90_14830 PF03484 tRNA synthetase B5 domain FPK90_14830 PF01588 Putative tRNA binding domain FPK90_14830 PF03147 Ferredoxin-fold anticodon binding domain FPK90_14835 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FPK90_14835 PF01409 tRNA synthetases class II core domain (F) FPK90_14840 PF00453 Ribosomal protein L20 FPK90_14845 PF01632 Ribosomal protein L35 FPK90_14850 PF05198 Translation initiation factor IF-3, N-terminal domain FPK90_14850 PF00707 Translation initiation factor IF-3, C-terminal domain FPK90_14855 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FPK90_14855 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FPK90_14855 PF02824 TGS domain FPK90_14855 PF03129 Anticodon binding domain FPK90_14860 PF00356 Bacterial regulatory proteins, lacI family FPK90_14865 PF00128 Alpha amylase, catalytic domain FPK90_14865 PF00686 Starch binding domain FPK90_14880 PF10566 Glycoside hydrolase 97 FPK90_14880 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation FPK90_14880 PF14508 Glycosyl-hydrolase 97 N-terminal FPK90_14895 PF00128 Alpha amylase, catalytic domain FPK90_14960 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FPK90_14965 PF05101 Type IV secretory pathway, VirB3-like protein FPK90_14975 PF01464 Transglycosylase SLT domain FPK90_14980 PF00437 Type II/IV secretion system protein FPK90_14985 PF03743 Bacterial conjugation TrbI-like protein FPK90_15005 PF02534 Type IV secretory system Conjugative DNA transfer FPK90_15020 PF12344 Ultra-violet resistance protein B FPK90_15020 PF00271 Helicase conserved C-terminal domain FPK90_15020 PF04851 Type III restriction enzyme, res subunit FPK90_15020 PF02151 UvrB/uvrC motif FPK90_15020 PF17757 UvrB interaction domain FPK90_15060 PF00114 Pilin (bacterial filament) FPK90_15060 PF07963 Prokaryotic N-terminal methylation motif FPK90_15065 PF03641 Possible lysine decarboxylase FPK90_15065 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases FPK90_15065 PF11892 Domain of unknown function (DUF3412) FPK90_15070 PF00593 TonB dependent receptor FPK90_15080 PF01914 MarC family integral membrane protein FPK90_15090 PF00462 Glutaredoxin FPK90_15095 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FPK90_15095 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FPK90_15100 PF02222 ATP-grasp domain FPK90_15100 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FPK90_15105 PF00731 AIR carboxylase FPK90_15115 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FPK90_15115 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FPK90_15125 PF00575 S1 RNA binding domain FPK90_15125 PF03725 3' exoribonuclease family, domain 2 FPK90_15125 PF01138 3' exoribonuclease family, domain 1 FPK90_15125 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FPK90_15125 PF00013 KH domain FPK90_15130 PF00312 Ribosomal protein S15 FPK90_15135 PF09157 Pseudouridine synthase II TruB, C-terminal FPK90_15135 PF16198 tRNA pseudouridylate synthase B C-terminal domain FPK90_15135 PF01509 TruB family pseudouridylate synthase (N terminal domain) FPK90_15140 PF02033 Ribosome-binding factor A FPK90_15145 PF00009 Elongation factor Tu GTP binding domain FPK90_15145 PF04760 Translation initiation factor IF-2, N-terminal region FPK90_15145 PF11987 Translation-initiation factor 2 FPK90_15145 PF08364 Bacterial translation initiation factor IF-2 associated region FPK90_15150 PF00575 S1 RNA binding domain FPK90_15150 PF08529 NusA N-terminal domain FPK90_15150 PF13184 NusA-like KH domain FPK90_15155 PF17384 RimP C-terminal SH3 domain FPK90_15155 PF02576 RimP N-terminal domain FPK90_15165 PF00361 Proton-conducting membrane transporter FPK90_15170 PF00361 Proton-conducting membrane transporter FPK90_15170 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus FPK90_15175 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FPK90_15175 PF00361 Proton-conducting membrane transporter FPK90_15180 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FPK90_15185 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FPK90_15190 PF12838 4Fe-4S dicluster domain FPK90_15195 PF00146 NADH dehydrogenase FPK90_15200 PF00384 Molybdopterin oxidoreductase FPK90_15200 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal FPK90_15200 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FPK90_15205 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FPK90_15205 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FPK90_15205 PF10531 SLBB domain FPK90_15215 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FPK90_15220 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FPK90_15225 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FPK90_15230 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FPK90_15245 PF00121 Triosephosphate isomerase FPK90_15250 PF00106 short chain dehydrogenase FPK90_15265 PF03707 Bacterial signalling protein N terminal repeat FPK90_15265 PF00563 EAL domain FPK90_15265 PF00990 Diguanylate cyclase, GGDEF domain FPK90_15280 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FPK90_15280 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FPK90_15280 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FPK90_15280 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FPK90_15285 PF17848 Acetyl-coA carboxylase zinc finger domain FPK90_15285 PF01039 Carboxyl transferase domain FPK90_15290 PF00290 Tryptophan synthase alpha chain FPK90_15300 PF00291 Pyridoxal-phosphate dependent enzyme FPK90_15305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FPK90_15305 PF03466 LysR substrate binding domain FPK90_15310 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FPK90_15315 PF01416 tRNA pseudouridine synthase FPK90_15335 PF01118 Semialdehyde dehydrogenase, NAD binding domain FPK90_15335 PF02774 Semialdehyde dehydrogenase, dimerisation domain FPK90_15340 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FPK90_15340 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FPK90_15345 PF01264 Chorismate synthase FPK90_15350 PF05175 Methyltransferase small domain FPK90_15355 PF02630 SCO1/SenC FPK90_15360 PF02666 Phosphatidylserine decarboxylase FPK90_15375 PF05872 Bacterial protein of unknown function (DUF853) FPK90_15380 PF00293 NUDIX domain FPK90_15400 PF03449 Transcription elongation factor, N-terminal FPK90_15400 PF01272 Transcription elongation factor, GreA/GreB, C-term FPK90_15405 PF18693 TRAM domain FPK90_15405 PF00919 Uncharacterized protein family UPF0004 FPK90_15405 PF04055 Radical SAM superfamily FPK90_15415 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin FPK90_15450 PF13175 AAA ATPase domain FPK90_15455 PF12320 Type 5 capsule protein repressor C-terminal domain FPK90_15455 PF00149 Calcineurin-like phosphoesterase FPK90_15470 PF00919 Uncharacterized protein family UPF0004 FPK90_15470 PF18693 TRAM domain FPK90_15470 PF04055 Radical SAM superfamily FPK90_15475 PF01738 Dienelactone hydrolase family FPK90_15495 PF00692 dUTPase FPK90_15505 PF10609 NUBPL iron-transfer P-loop NTPase FPK90_15510 PF00593 TonB dependent receptor FPK90_15510 PF07715 TonB-dependent Receptor Plug Domain FPK90_15525 PF05649 Peptidase family M13 FPK90_15525 PF01431 Peptidase family M13 FPK90_15535 PF05649 Peptidase family M13 FPK90_15535 PF01431 Peptidase family M13 FPK90_15550 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FPK90_15555 PF07992 Pyridine nucleotide-disulphide oxidoreductase FPK90_15555 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FPK90_15560 PF01266 FAD dependent oxidoreductase FPK90_15565 PF04235 Protein of unknown function (DUF418) FPK90_15570 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FPK90_15575 PF00877 NlpC/P60 family FPK90_15580 PF00877 NlpC/P60 family FPK90_15595 PF00375 Sodium:dicarboxylate symporter family FPK90_15600 PF00245 Alkaline phosphatase FPK90_15610 PF09179 TilS substrate binding domain FPK90_15610 PF11734 TilS substrate C-terminal domain FPK90_15610 PF01171 PP-loop family FPK90_15615 PF02609 Exonuclease VII small subunit FPK90_15620 PF00348 Polyprenyl synthetase FPK90_15625 PF14521 Lysine-specific metallo-endopeptidase FPK90_15635 PF01523 Putative modulator of DNA gyrase FPK90_15640 PF04751 Protein of unknown function (DUF615) FPK90_15645 PF01523 Putative modulator of DNA gyrase FPK90_15655 PF13502 AsmA-like C-terminal region FPK90_15655 PF13116 Protein of unknown function FPK90_15660 PF10150 Ribonuclease E/G family FPK90_15660 PF00575 S1 RNA binding domain FPK90_15665 PF02545 Maf-like protein FPK90_15670 PF04402 Protein of unknown function (DUF541) FPK90_15685 PF02590 Predicted SPOUT methyltransferase FPK90_15700 PF01467 Cytidylyltransferase-like FPK90_15715 PF13603 Leucyl-tRNA synthetase, Domain 2 FPK90_15715 PF00133 tRNA synthetases class I (I, L, M and V) FPK90_15715 PF08264 Anticodon-binding domain of tRNA FPK90_15725 PF00085 Thioredoxin FPK90_15750 PF04070 Domain of unknown function (DUF378) FPK90_15755 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FPK90_15765 PF03466 LysR substrate binding domain FPK90_15765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FPK90_15795 PF00664 ABC transporter transmembrane region FPK90_15795 PF00005 ABC transporter FPK90_15810 PF00873 AcrB/AcrD/AcrF family FPK90_15825 PF02321 Outer membrane efflux protein FPK90_15830 PF00486 Transcriptional regulatory protein, C terminal FPK90_15830 PF00072 Response regulator receiver domain FPK90_15835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_15835 PF00512 His Kinase A (phospho-acceptor) domain FPK90_15835 PF00672 HAMP domain FPK90_15840 PF00999 Sodium/hydrogen exchanger family FPK90_15845 PF00144 Beta-lactamase FPK90_15850 PF03737 Aldolase/RraA FPK90_15875 PF00849 RNA pseudouridylate synthase FPK90_15875 PF01479 S4 domain FPK90_15880 PF00563 EAL domain FPK90_15880 PF00990 Diguanylate cyclase, GGDEF domain FPK90_15880 PF08448 PAS fold FPK90_15885 PF03880 DbpA RNA binding domain FPK90_15885 PF00270 DEAD/DEAH box helicase FPK90_15885 PF00271 Helicase conserved C-terminal domain FPK90_15935 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FPK90_15935 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FPK90_15945 PF00654 Voltage gated chloride channel FPK90_15950 PF00107 Zinc-binding dehydrogenase FPK90_15950 PF08240 Alcohol dehydrogenase GroES-like domain FPK90_15970 PF07715 TonB-dependent Receptor Plug Domain FPK90_15970 PF00593 TonB dependent receptor FPK90_15990 PF13406 Transglycosylase SLT domain FPK90_15995 PF01526 Tn3 transposase DDE domain FPK90_15995 PF13700 Domain of unknown function (DUF4158) FPK90_16010 PF01129 NAD:arginine ADP-ribosyltransferase FPK90_16040 PF01483 Proprotein convertase P-domain FPK90_16040 PF00082 Subtilase family FPK90_16050 PF01483 Proprotein convertase P-domain FPK90_16050 PF00082 Subtilase family FPK90_16060 PF00248 Aldo/keto reductase family FPK90_16065 PF07690 Major Facilitator Superfamily FPK90_16070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FPK90_16070 PF03466 LysR substrate binding domain FPK90_16075 PF12833 Helix-turn-helix domain FPK90_16075 PF06719 AraC-type transcriptional regulator N-terminus FPK90_16085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FPK90_16085 PF03466 LysR substrate binding domain FPK90_16090 PF00248 Aldo/keto reductase family FPK90_16095 PF00440 Bacterial regulatory proteins, tetR family FPK90_16095 PF16859 Tetracyclin repressor-like, C-terminal domain FPK90_16100 PF02321 Outer membrane efflux protein FPK90_16105 PF00873 AcrB/AcrD/AcrF family FPK90_16110 PF00529 HlyD membrane-fusion protein of T1SS FPK90_16110 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FPK90_16120 PF01475 Ferric uptake regulator family FPK90_16125 PF00749 tRNA synthetases class I (E and Q), catalytic domain FPK90_16150 PF06123 Inner membrane protein CreD FPK90_16165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_16165 PF00672 HAMP domain FPK90_16165 PF00512 His Kinase A (phospho-acceptor) domain FPK90_16170 PF00072 Response regulator receiver domain FPK90_16170 PF00486 Transcriptional regulatory protein, C terminal FPK90_16175 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FPK90_16190 PF00270 DEAD/DEAH box helicase FPK90_16190 PF00271 Helicase conserved C-terminal domain FPK90_16190 PF03461 TRCF domain FPK90_16190 PF17757 UvrB interaction domain FPK90_16190 PF02559 CarD-like/TRCF domain FPK90_16200 PF02895 Signal transducing histidine kinase, homodimeric domain FPK90_16200 PF09078 CheY binding FPK90_16200 PF01584 CheW-like domain FPK90_16200 PF01627 Hpt domain FPK90_16200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_16205 PF00672 HAMP domain FPK90_16205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FPK90_16205 PF02203 Tar ligand binding domain homologue FPK90_16210 PF01584 CheW-like domain FPK90_16215 PF00990 Diguanylate cyclase, GGDEF domain FPK90_16215 PF13426 PAS domain FPK90_16215 PF00563 EAL domain FPK90_16220 PF01739 CheR methyltransferase, SAM binding domain FPK90_16220 PF03705 CheR methyltransferase, all-alpha domain FPK90_16225 PF00072 Response regulator receiver domain FPK90_16225 PF01339 CheB methylesterase FPK90_16230 PF13091 PLD-like domain FPK90_16235 PF05649 Peptidase family M13 FPK90_16235 PF01431 Peptidase family M13 FPK90_16245 PF00300 Histidine phosphatase superfamily (branch 1) FPK90_16250 PF04493 Endonuclease V FPK90_16260 PF05726 Pirin C-terminal cupin domain FPK90_16260 PF02678 Pirin FPK90_16275 PF05726 Pirin C-terminal cupin domain FPK90_16275 PF02678 Pirin FPK90_16280 PF02554 Carbon starvation protein CstA FPK90_16280 PF13722 5TM C-terminal transporter carbon starvation CstA FPK90_16285 PF04328 Selenoprotein, putative FPK90_16330 PF02625 XdhC and CoxI family FPK90_16330 PF13478 XdhC Rossmann domain FPK90_16335 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FPK90_16335 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FPK90_16340 PF00941 FAD binding domain in molybdopterin dehydrogenase FPK90_16340 PF03450 CO dehydrogenase flavoprotein C-terminal domain FPK90_16345 PF00111 2Fe-2S iron-sulfur cluster binding domain FPK90_16345 PF10518 TAT (twin-arginine translocation) pathway signal sequence FPK90_16345 PF01799 [2Fe-2S] binding domain FPK90_16350 PF02801 Beta-ketoacyl synthase, C-terminal domain FPK90_16350 PF08659 KR domain FPK90_16350 PF00550 Phosphopantetheine attachment site FPK90_16350 PF14765 Polyketide synthase dehydratase FPK90_16350 PF00109 Beta-ketoacyl synthase, N-terminal domain FPK90_16350 PF16197 Ketoacyl-synthetase C-terminal extension FPK90_16350 PF00698 Acyl transferase domain FPK90_16350 PF09277 Erythronolide synthase, docking FPK90_16350 PF08990 Erythronolide synthase docking FPK90_16350 PF08240 Alcohol dehydrogenase GroES-like domain FPK90_16355 PF01590 GAF domain FPK90_16355 PF00990 Diguanylate cyclase, GGDEF domain FPK90_16355 PF00563 EAL domain FPK90_16355 PF00360 Phytochrome region FPK90_16360 PF00436 Single-strand binding protein family FPK90_16365 PF00348 Polyprenyl synthetase FPK90_16375 PF02875 Mur ligase family, glutamate ligase domain FPK90_16375 PF08245 Mur ligase middle domain FPK90_16390 PF00696 Amino acid kinase family FPK90_16390 PF01842 ACT domain FPK90_16395 PF02567 Phenazine biosynthesis-like protein FPK90_16400 PF02567 Phenazine biosynthesis-like protein FPK90_16410 PF02566 OsmC-like protein FPK90_16415 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FPK90_16415 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FPK90_16420 PF03652 Holliday junction resolvase FPK90_16425 PF02622 Uncharacterized ACR, COG1678 FPK90_16435 PF00117 Glutamine amidotransferase class-I FPK90_16435 PF13302 Acetyltransferase (GNAT) domain FPK90_16435 PF03352 Methyladenine glycosylase FPK90_16435 PF00958 GMP synthase C terminal domain FPK90_16435 PF13673 Acetyltransferase (GNAT) domain FPK90_16450 PF00437 Type II/IV secretion system protein FPK90_16455 PF00437 Type II/IV secretion system protein FPK90_16460 PF01168 Alanine racemase, N-terminal domain FPK90_16465 PF03807 NADP oxidoreductase coenzyme F420-dependent FPK90_16465 PF14748 Pyrroline-5-carboxylate reductase dimerisation FPK90_16475 PF01551 Peptidase family M23 FPK90_16495 PF01965 DJ-1/PfpI family FPK90_16505 PF02082 Transcriptional regulator FPK90_16510 PF01458 Uncharacterized protein family (UPF0051) FPK90_16515 PF00005 ABC transporter FPK90_16520 PF01458 Uncharacterized protein family (UPF0051) FPK90_16525 PF00266 Aminotransferase class-V FPK90_16535 PF00355 Rieske [2Fe-2S] domain FPK90_16540 PF07715 TonB-dependent Receptor Plug Domain FPK90_16540 PF00593 TonB dependent receptor FPK90_16545 PF13640 2OG-Fe(II) oxygenase superfamily FPK90_16545 PF18331 PKHD-type hydroxylase C-terminal domain FPK90_16570 PF02424 ApbE family FPK90_16575 PF00175 Oxidoreductase NAD-binding domain FPK90_16575 PF00258 Flavodoxin FPK90_16575 PF00667 FAD binding domain FPK90_16605 PF01636 Phosphotransferase enzyme family FPK90_16610 PF00483 Nucleotidyl transferase FPK90_16615 PF00308 Bacterial dnaA protein FPK90_16620 PF01594 AI-2E family transporter FPK90_16630 PF02769 AIR synthase related protein, C-terminal domain FPK90_16630 PF00586 AIR synthase related protein, N-terminal domain FPK90_16640 PF00551 Formyl transferase FPK90_16660 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FPK90_16665 PF01722 BolA-like protein FPK90_16670 PF00571 CBS domain FPK90_16670 PF01380 SIS domain FPK90_16685 PF03968 OstA-like protein FPK90_16690 PF00005 ABC transporter FPK90_16695 PF00309 Sigma-54 factor, Activator interacting domain (AID) FPK90_16695 PF04963 Sigma-54 factor, core binding domain FPK90_16695 PF04552 Sigma-54, DNA binding domain FPK90_16700 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FPK90_16705 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FPK90_16710 PF07475 HPr Serine kinase C-terminal domain FPK90_16710 PF02603 HPr Serine kinase N terminus FPK90_16715 PF03668 P-loop ATPase protein family FPK90_16725 PF00381 PTS HPr component phosphorylation site FPK90_16730 PF02896 PEP-utilising enzyme, TIM barrel domain FPK90_16730 PF00391 PEP-utilising enzyme, mobile domain FPK90_16730 PF05524 PEP-utilising enzyme, N-terminal FPK90_16740 PF03448 MgtE intracellular N domain FPK90_16740 PF00571 CBS domain FPK90_16740 PF01769 Divalent cation transporter FPK90_16745 PF00756 Putative esterase FPK90_16755 PF02322 Cytochrome bd terminal oxidase subunit II FPK90_16760 PF01654 Cytochrome bd terminal oxidase subunit I FPK90_16770 PF00324 Amino acid permease FPK90_16780 PF00544 Pectate lyase FPK90_16790 PF00561 alpha/beta hydrolase fold FPK90_16800 PF00196 Bacterial regulatory proteins, luxR family FPK90_16805 PF00324 Amino acid permease FPK90_16835 PF12706 Beta-lactamase superfamily domain FPK90_16840 PF04820 Tryptophan halogenase FPK90_16895 PF00376 MerR family regulatory protein FPK90_16895 PF09278 MerR, DNA binding FPK90_16910 PF03738 Glutathionylspermidine synthase preATP-grasp FPK90_16935 PF04012 PspA/IM30 family FPK90_16945 PF01243 Pyridoxamine 5'-phosphate oxidase FPK90_16945 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FPK90_16950 PF01202 Shikimate kinase FPK90_16955 PF01761 3-dehydroquinate synthase FPK90_16965 PF01208 Uroporphyrinogen decarboxylase (URO-D) FPK90_16970 PF07690 Major Facilitator Superfamily FPK90_16975 PF00512 His Kinase A (phospho-acceptor) domain FPK90_16975 PF17149 Periplasmic sensor domain found in signal transduction proteins FPK90_16975 PF00072 Response regulator receiver domain FPK90_16975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_16975 PF01627 Hpt domain FPK90_16975 PF00672 HAMP domain FPK90_16980 PF00512 His Kinase A (phospho-acceptor) domain FPK90_16980 PF00672 HAMP domain FPK90_16980 PF17149 Periplasmic sensor domain found in signal transduction proteins FPK90_16980 PF01627 Hpt domain FPK90_16980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_16980 PF00072 Response regulator receiver domain FPK90_16990 PF01627 Hpt domain FPK90_16990 PF00072 Response regulator receiver domain FPK90_16990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_16990 PF00512 His Kinase A (phospho-acceptor) domain FPK90_16995 PF04264 YceI-like domain FPK90_17015 PF03313 Serine dehydratase alpha chain FPK90_17015 PF03315 Serine dehydratase beta chain FPK90_17020 PF00561 alpha/beta hydrolase fold FPK90_17030 PF03447 Homoserine dehydrogenase, NAD binding domain FPK90_17030 PF00696 Amino acid kinase family FPK90_17030 PF00742 Homoserine dehydrogenase FPK90_17035 PF01053 Cys/Met metabolism PLP-dependent enzyme FPK90_17040 PF00561 alpha/beta hydrolase fold FPK90_17045 PF01476 LysM domain FPK90_17045 PF01551 Peptidase family M23 FPK90_17045 PF08525 Opacity-associated protein A N-terminal motif FPK90_17050 PF16658 Class II release factor RF3, C-terminal domain FPK90_17050 PF00009 Elongation factor Tu GTP binding domain FPK90_17055 PF03006 Haemolysin-III related FPK90_17060 PF05170 AsmA family FPK90_17065 PF00478 IMP dehydrogenase / GMP reductase domain FPK90_17065 PF00571 CBS domain FPK90_17070 PF00535 Glycosyl transferase family 2 FPK90_17075 PF00912 Transglycosylase FPK90_17080 PF01430 Hsp33 protein FPK90_17090 PF07715 TonB-dependent Receptor Plug Domain FPK90_17090 PF00593 TonB dependent receptor FPK90_17095 PF00440 Bacterial regulatory proteins, tetR family FPK90_17100 PF00561 alpha/beta hydrolase fold FPK90_17105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FPK90_17105 PF09317 Domain of unknown function (DUF1974) FPK90_17105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FPK90_17135 PF01597 Glycine cleavage H-protein FPK90_17140 PF01571 Aminomethyltransferase folate-binding domain FPK90_17140 PF08669 Glycine cleavage T-protein C-terminal barrel domain FPK90_17165 PF02694 Uncharacterised BCR, YnfA/UPF0060 family FPK90_17170 PF03819 MazG nucleotide pyrophosphohydrolase domain FPK90_17175 PF00459 Inositol monophosphatase family FPK90_17180 PF00293 NUDIX domain FPK90_17185 PF00202 Aminotransferase class-III FPK90_17190 PF04452 RNA methyltransferase FPK90_17195 PF02685 Glucokinase FPK90_17210 PF00704 Glycosyl hydrolases family 18 FPK90_17210 PF01476 LysM domain FPK90_17225 PF01915 Glycosyl hydrolase family 3 C-terminal domain FPK90_17225 PF07691 PA14 domain FPK90_17225 PF00933 Glycosyl hydrolase family 3 N terminal domain FPK90_17225 PF14310 Fibronectin type III-like domain FPK90_17235 PF01301 Glycosyl hydrolases family 35 FPK90_17240 PF13520 Amino acid permease FPK90_17250 PF11975 Family 4 glycosyl hydrolase C-terminal domain FPK90_17250 PF02056 Family 4 glycosyl hydrolase FPK90_17260 PF17678 Glycosyl hydrolase family 92 N-terminal domain FPK90_17260 PF07971 Glycosyl hydrolase family 92 FPK90_17265 PF01301 Glycosyl hydrolases family 35 FPK90_17300 PF03932 CutC family FPK90_17305 PF01112 Asparaginase FPK90_17320 PF13302 Acetyltransferase (GNAT) domain FPK90_17335 PF00072 Response regulator receiver domain FPK90_17335 PF01627 Hpt domain FPK90_17335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_17335 PF01584 CheW-like domain FPK90_17340 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term FPK90_17340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FPK90_17345 PF01584 CheW-like domain FPK90_17350 PF00072 Response regulator receiver domain FPK90_17355 PF00072 Response regulator receiver domain FPK90_17360 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FPK90_17360 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FPK90_17370 PF03747 ADP-ribosylglycohydrolase FPK90_17375 PF00814 Glycoprotease family FPK90_17380 PF04851 Type III restriction enzyme, res subunit FPK90_17380 PF13307 Helicase C-terminal domain FPK90_17390 PF00905 Penicillin binding protein transpeptidase domain FPK90_17390 PF14814 Bifunctional transglycosylase second domain FPK90_17390 PF00912 Transglycosylase FPK90_17395 PF00535 Glycosyl transferase family 2 FPK90_17410 PF13291 ACT domain FPK90_17410 PF04607 Region found in RelA / SpoT proteins FPK90_17410 PF02824 TGS domain FPK90_17420 PF12706 Beta-lactamase superfamily domain FPK90_17425 PF03070 TENA/THI-4/PQQC family FPK90_17430 PF05402 Coenzyme PQQ synthesis protein D (PqqD) FPK90_17435 PF04055 Radical SAM superfamily FPK90_17435 PF13186 Iron-sulfur cluster-binding domain FPK90_17450 PF02685 Glucokinase FPK90_17465 PF00271 Helicase conserved C-terminal domain FPK90_17465 PF00270 DEAD/DEAH box helicase FPK90_17465 PF11898 Domain of unknown function (DUF3418) FPK90_17465 PF04408 Helicase associated domain (HA2) FPK90_17465 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold FPK90_17470 PF00210 Ferritin-like domain FPK90_17475 PF00271 Helicase conserved C-terminal domain FPK90_17475 PF16124 RecQ zinc-binding FPK90_17475 PF00570 HRDC domain FPK90_17475 PF00270 DEAD/DEAH box helicase FPK90_17475 PF09382 RQC domain FPK90_17510 PF00672 HAMP domain FPK90_17510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FPK90_17510 PF02203 Tar ligand binding domain homologue FPK90_17530 PF13581 Histidine kinase-like ATPase domain FPK90_17530 PF13426 PAS domain FPK90_17530 PF07536 HWE histidine kinase FPK90_17535 PF06508 Queuosine biosynthesis protein QueC FPK90_17785 PF01555 DNA methylase FPK90_17805 PF00717 Peptidase S24-like FPK90_17815 PF04055 Radical SAM superfamily FPK90_17825 PF00691 OmpA family FPK90_17830 PF07676 WD40-like Beta Propeller Repeat FPK90_17830 PF04052 TolB amino-terminal domain FPK90_17840 PF02472 Biopolymer transport protein ExbD/TolR FPK90_17845 PF01618 MotA/TolQ/ExbB proton channel family FPK90_17850 PF03061 Thioesterase superfamily FPK90_17855 PF17864 RuvB AAA lid domain FPK90_17855 PF05496 Holliday junction DNA helicase RuvB P-loop domain FPK90_17855 PF05491 RuvB C-terminal winged helix domain FPK90_17865 PF02705 K+ potassium transporter FPK90_17870 PF01330 RuvA N terminal domain FPK90_17870 PF07499 RuvA, C-terminal domain FPK90_17875 PF02075 Crossover junction endodeoxyribonuclease RuvC FPK90_17880 PF01709 Transcriptional regulator FPK90_17895 PF02938 GAD domain FPK90_17895 PF00152 tRNA synthetases class II (D, K and N) FPK90_17895 PF01336 OB-fold nucleic acid binding domain FPK90_17950 PF01936 NYN domain FPK90_17950 PF09722 Protein of unknown function (DUF2384) FPK90_17955 PF03377 TAL effector repeat FPK90_17975 PF01936 NYN domain FPK90_17975 PF09722 Protein of unknown function (DUF2384) FPK90_17980 PF03377 TAL effector repeat FPK90_18020 PF13406 Transglycosylase SLT domain FPK90_18035 PF07690 Major Facilitator Superfamily FPK90_18045 PF04185 Phosphoesterase family FPK90_18045 PF05506 Domain of unknown function (DUF756) FPK90_18065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FPK90_18065 PF03466 LysR substrate binding domain FPK90_18075 PF12848 ABC transporter FPK90_18075 PF00005 ABC transporter FPK90_18080 PF00593 TonB dependent receptor FPK90_18080 PF07715 TonB-dependent Receptor Plug Domain FPK90_18095 PF07715 TonB-dependent Receptor Plug Domain FPK90_18095 PF00593 TonB dependent receptor FPK90_18100 PF07715 TonB-dependent Receptor Plug Domain FPK90_18100 PF00593 TonB dependent receptor FPK90_18105 PF00067 Cytochrome P450 FPK90_18115 PF02254 TrkA-N domain FPK90_18115 PF00999 Sodium/hydrogen exchanger family FPK90_18140 PF00593 TonB dependent receptor FPK90_18140 PF07715 TonB-dependent Receptor Plug Domain FPK90_18140 PF07660 Secretin and TonB N terminus short domain FPK90_18150 PF04183 IucA / IucC family FPK90_18150 PF06276 Ferric iron reductase FhuF-like transporter FPK90_18155 PF07690 Major Facilitator Superfamily FPK90_18165 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FPK90_18165 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FPK90_18175 PF02654 Cobalamin-5-phosphate synthase FPK90_18185 PF02277 Phosphoribosyltransferase FPK90_18190 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FPK90_18195 PF07685 CobB/CobQ-like glutamine amidotransferase domain FPK90_18195 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FPK90_18200 PF00155 Aminotransferase class I and II FPK90_18205 PF03186 CobD/Cbib protein FPK90_18205 PF17113 Regulatory signalling modulator protein AmpE FPK90_18210 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP FPK90_18210 PF12557 Cob(I)alamin adenosyltransferase N terminal FPK90_18230 PF00593 TonB dependent receptor FPK90_18230 PF07715 TonB-dependent Receptor Plug Domain FPK90_18235 PF02861 Clp amino terminal domain, pathogenicity island component FPK90_18235 PF10431 C-terminal, D2-small domain, of ClpB protein FPK90_18235 PF17871 AAA lid domain FPK90_18235 PF07724 AAA domain (Cdc48 subfamily) FPK90_18235 PF00004 ATPase family associated with various cellular activities (AAA) FPK90_18240 PF00005 ABC transporter FPK90_18245 PF00528 Binding-protein-dependent transport system inner membrane component FPK90_18250 PF09084 NMT1/THI5 like FPK90_18255 PF00248 Aldo/keto reductase family FPK90_18265 PF07715 TonB-dependent Receptor Plug Domain FPK90_18265 PF00593 TonB dependent receptor FPK90_18275 PF01541 GIY-YIG catalytic domain FPK90_18310 PF00593 TonB dependent receptor FPK90_18310 PF07715 TonB-dependent Receptor Plug Domain FPK90_18320 PF02358 Trehalose-phosphatase FPK90_18330 PF00982 Glycosyltransferase family 20 FPK90_18335 PF01011 PQQ enzyme repeat FPK90_18345 PF00672 HAMP domain FPK90_18345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FPK90_18345 PF02203 Tar ligand binding domain homologue FPK90_18350 PF04134 Protein of unknown function, DUF393 FPK90_18365 PF00849 RNA pseudouridylate synthase FPK90_18370 PF13525 Outer membrane lipoprotein FPK90_18380 PF02540 NAD synthase FPK90_18380 PF00795 Carbon-nitrogen hydrolase FPK90_18390 PF02629 CoA binding domain FPK90_18390 PF00549 CoA-ligase FPK90_18395 PF00549 CoA-ligase FPK90_18395 PF08442 ATP-grasp domain FPK90_18400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_18400 PF00512 His Kinase A (phospho-acceptor) domain FPK90_18405 PF00158 Sigma-54 interaction domain FPK90_18405 PF00072 Response regulator receiver domain FPK90_18405 PF02954 Bacterial regulatory protein, Fis family FPK90_18425 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FPK90_18425 PF00437 Type II/IV secretion system protein FPK90_18430 PF00114 Pilin (bacterial filament) FPK90_18430 PF07963 Prokaryotic N-terminal methylation motif FPK90_18435 PF00482 Type II secretion system (T2SS), protein F FPK90_18440 PF01478 Type IV leader peptidase family FPK90_18440 PF06750 Bacterial Peptidase A24 N-terminal domain FPK90_18445 PF01121 Dephospho-CoA kinase FPK90_18465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_18465 PF00512 His Kinase A (phospho-acceptor) domain FPK90_18465 PF00989 PAS fold FPK90_18465 PF16736 Single Cache-like FPK90_18470 PF00486 Transcriptional regulatory protein, C terminal FPK90_18470 PF00072 Response regulator receiver domain FPK90_18480 PF08443 RimK-like ATP-grasp domain FPK90_18480 PF18030 RimK PreATP-grasp domain FPK90_18485 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FPK90_18485 PF00128 Alpha amylase, catalytic domain FPK90_18590 PF05973 Phage derived protein Gp49-like (DUF891) FPK90_18620 PF05593 RHS Repeat FPK90_18620 PF03527 RHS protein FPK90_18660 PF03797 Autotransporter beta-domain FPK90_18660 PF00657 GDSL-like Lipase/Acylhydrolase FPK90_18670 PF05690 Thiazole biosynthesis protein ThiG FPK90_18680 PF02390 Putative methyltransferase FPK90_18685 PF03600 Citrate transporter FPK90_18685 PF02080 TrkA-C domain FPK90_18700 PF01557 Fumarylacetoacetate (FAA) hydrolase family FPK90_18705 PF01741 Large-conductance mechanosensitive channel, MscL FPK90_18715 PF00356 Bacterial regulatory proteins, lacI family FPK90_18720 PF02611 CDP-diacylglycerol pyrophosphatase FPK90_18730 PF05662 Coiled stalk of trimeric autotransporter adhesin FPK90_18730 PF13018 Extended Signal Peptide of Type V secretion system FPK90_18730 PF05658 Head domain of trimeric autotransporter adhesin FPK90_18730 PF03895 YadA-like membrane anchor domain FPK90_18750 PF09456 RcsC Alpha-Beta-Loop (ABL) FPK90_18750 PF00072 Response regulator receiver domain FPK90_18750 PF00512 His Kinase A (phospho-acceptor) domain FPK90_18750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_18755 PF12792 CSS motif domain associated with EAL FPK90_18755 PF00563 EAL domain FPK90_18770 PF00553 Cellulose binding domain FPK90_18770 PF01341 Glycosyl hydrolases family 6 FPK90_18770 PF00041 Fibronectin type III domain FPK90_18780 PF02837 Glycosyl hydrolases family 2, sugar binding domain FPK90_18780 PF00703 Glycosyl hydrolases family 2 FPK90_18780 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain FPK90_18785 PF14508 Glycosyl-hydrolase 97 N-terminal FPK90_18785 PF10566 Glycoside hydrolase 97 FPK90_18785 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation FPK90_18795 PF00135 Carboxylesterase family FPK90_18800 PF08032 RNA 2'-O ribose methyltransferase substrate binding FPK90_18800 PF00588 SpoU rRNA Methylase family FPK90_18810 PF01433 Peptidase family M1 domain FPK90_18810 PF11838 ERAP1-like C-terminal domain FPK90_18815 PF00873 AcrB/AcrD/AcrF family FPK90_18820 PF00529 HlyD membrane-fusion protein of T1SS FPK90_18820 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FPK90_18825 PF00009 Elongation factor Tu GTP binding domain FPK90_18830 PF01507 Phosphoadenosine phosphosulfate reductase family FPK90_18835 PF00667 FAD binding domain FPK90_18835 PF00175 Oxidoreductase NAD-binding domain FPK90_18835 PF00258 Flavodoxin FPK90_18840 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FPK90_18840 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FPK90_18845 PF01507 Phosphoadenosine phosphosulfate reductase family FPK90_18865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_18865 PF01627 Hpt domain FPK90_18865 PF00512 His Kinase A (phospho-acceptor) domain FPK90_18865 PF00072 Response regulator receiver domain FPK90_18880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FPK90_18880 PF03466 LysR substrate binding domain FPK90_18885 PF14824 Sirohaem biosynthesis protein central FPK90_18885 PF10414 Sirohaem synthase dimerisation region FPK90_18885 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FPK90_18890 PF00291 Pyridoxal-phosphate dependent enzyme FPK90_18900 PF01661 Macro domain FPK90_18905 PF00274 Fructose-bisphosphate aldolase class-I FPK90_18920 PF00224 Pyruvate kinase, barrel domain FPK90_18920 PF02887 Pyruvate kinase, alpha/beta domain FPK90_18930 PF00162 Phosphoglycerate kinase FPK90_18955 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FPK90_18955 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FPK90_18965 PF03922 OmpW family FPK90_18970 PF03922 OmpW family FPK90_18980 PF00753 Metallo-beta-lactamase superfamily FPK90_18980 PF04273 Putative phosphatase (DUF442) FPK90_18990 PF00528 Binding-protein-dependent transport system inner membrane component FPK90_18995 PF03459 TOBE domain FPK90_18995 PF00005 ABC transporter FPK90_19030 PF01476 LysM domain FPK90_19030 PF03734 L,D-transpeptidase catalytic domain FPK90_19035 PF01551 Peptidase family M23 FPK90_19035 PF04225 Opacity-associated protein A LysM-like domain FPK90_19045 PF00593 TonB dependent receptor FPK90_19045 PF07715 TonB-dependent Receptor Plug Domain FPK90_19050 PF12146 Serine aminopeptidase, S33 FPK90_19055 PF00456 Transketolase, thiamine diphosphate binding domain FPK90_19055 PF02779 Transketolase, pyrimidine binding domain FPK90_19055 PF02780 Transketolase, C-terminal domain FPK90_19060 PF00375 Sodium:dicarboxylate symporter family FPK90_19070 PF07584 Aerotolerance regulator N-terminal FPK90_19070 PF00092 von Willebrand factor type A domain FPK90_19090 PF17863 AAA lid domain FPK90_19090 PF07726 ATPase family associated with various cellular activities (AAA) FPK90_19095 PF00263 Bacterial type II and III secretion system protein FPK90_19095 PF11741 AMIN domain FPK90_19095 PF03958 Bacterial type II/III secretion system short domain FPK90_19095 PF07660 Secretin and TonB N terminus short domain FPK90_19120 PF00905 Penicillin binding protein transpeptidase domain FPK90_19120 PF17092 Penicillin-binding protein OB-like domain FPK90_19120 PF00912 Transglycosylase FPK90_19130 PF00285 Citrate synthase, C-terminal domain FPK90_19135 PF01197 Ribosomal protein L31 FPK90_19140 PF01156 Inosine-uridine preferring nucleoside hydrolase FPK90_19145 PF00270 DEAD/DEAH box helicase FPK90_19145 PF17191 RecG wedge domain FPK90_19145 PF00271 Helicase conserved C-terminal domain FPK90_19150 PF01042 Endoribonuclease L-PSP FPK90_19155 PF04607 Region found in RelA / SpoT proteins FPK90_19155 PF13291 ACT domain FPK90_19155 PF02824 TGS domain FPK90_19160 PF01192 RNA polymerase Rpb6 FPK90_19165 PF00625 Guanylate kinase FPK90_19170 PF08340 Domain of unknown function (DUF1732) FPK90_19170 PF03755 YicC-like family, N-terminal region FPK90_19175 PF01138 3' exoribonuclease family, domain 1 FPK90_19175 PF03725 3' exoribonuclease family, domain 2 FPK90_19185 PF01725 Ham1 family FPK90_19190 PF04055 Radical SAM superfamily FPK90_19190 PF06969 HemN C-terminal domain FPK90_19205 PF00557 Metallopeptidase family M24 FPK90_19215 PF05195 Aminopeptidase P, N-terminal domain FPK90_19215 PF00557 Metallopeptidase family M24 FPK90_19220 PF03695 Uncharacterised protein family (UPF0149) FPK90_19230 PF05164 Cell division protein ZapA FPK90_19240 PF01812 5-formyltetrahydrofolate cyclo-ligase family FPK90_19250 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FPK90_19260 PF13369 Transglutaminase-like superfamily FPK90_19265 PF00301 Rubredoxin FPK90_19270 PF02581 Thiamine monophosphate synthase FPK90_19280 PF00202 Aminotransferase class-III FPK90_19285 PF17874 MalT-like TPR region FPK90_19285 PF00196 Bacterial regulatory proteins, luxR family FPK90_19290 PF00127 Copper binding proteins, plastocyanin/azurin family FPK90_19300 PF00155 Aminotransferase class I and II FPK90_19310 PF00034 Cytochrome c FPK90_19310 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FPK90_19315 PF01593 Flavin containing amine oxidoreductase FPK90_19330 PF00202 Aminotransferase class-III FPK90_19335 PF00520 Ion transport protein FPK90_19335 PF00027 Cyclic nucleotide-binding domain FPK90_19355 PF01569 PAP2 superfamily FPK90_19360 PF01062 Bestrophin, RFP-TM, chloride channel FPK90_19370 PF01225 Mur ligase family, catalytic domain FPK90_19370 PF08245 Mur ligase middle domain FPK90_19370 PF02875 Mur ligase family, glutamate ligase domain FPK90_19380 PF00365 Phosphofructokinase FPK90_19390 PF03030 Inorganic H+ pyrophosphatase FPK90_19400 PF00719 Inorganic pyrophosphatase FPK90_19410 PF07715 TonB-dependent Receptor Plug Domain FPK90_19410 PF00593 TonB dependent receptor FPK90_19415 PF12833 Helix-turn-helix domain FPK90_19425 PF01964 Radical SAM ThiC family FPK90_19425 PF13667 ThiC-associated domain FPK90_19435 PF00593 TonB dependent receptor FPK90_19435 PF07715 TonB-dependent Receptor Plug Domain FPK90_19440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FPK90_19440 PF00672 HAMP domain FPK90_19450 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FPK90_19450 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FPK90_19455 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FPK90_19455 PF00205 Thiamine pyrophosphate enzyme, central domain FPK90_19455 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FPK90_19465 PF00291 Pyridoxal-phosphate dependent enzyme FPK90_19470 PF00682 HMGL-like FPK90_19470 PF08502 LeuA allosteric (dimerisation) domain FPK90_19480 PF00180 Isocitrate/isopropylmalate dehydrogenase FPK90_19485 PF00694 Aconitase C-terminal domain FPK90_19490 PF00330 Aconitase family (aconitate hydratase) FPK90_19495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FPK90_19500 PF17151 Periplasmic sensor domain FPK90_19500 PF00990 Diguanylate cyclase, GGDEF domain FPK90_19515 PF02321 Outer membrane efflux protein FPK90_19520 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FPK90_19530 PF03279 Bacterial lipid A biosynthesis acyltransferase FPK90_19560 PF00390 Malic enzyme, N-terminal domain FPK90_19560 PF01515 Phosphate acetyl/butaryl transferase FPK90_19560 PF03949 Malic enzyme, NAD binding domain FPK90_19565 PF00375 Sodium:dicarboxylate symporter family FPK90_19575 PF02743 Cache domain FPK90_19575 PF00512 His Kinase A (phospho-acceptor) domain FPK90_19575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_19580 PF07690 Major Facilitator Superfamily FPK90_19590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FPK90_19590 PF03466 LysR substrate binding domain FPK90_19600 PF00248 Aldo/keto reductase family FPK90_19615 PF00072 Response regulator receiver domain FPK90_19615 PF00196 Bacterial regulatory proteins, luxR family FPK90_19625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_19625 PF08521 Two-component sensor kinase N-terminal FPK90_19625 PF00512 His Kinase A (phospho-acceptor) domain FPK90_19630 PF00072 Response regulator receiver domain FPK90_19630 PF00486 Transcriptional regulatory protein, C terminal FPK90_19645 PF03600 Citrate transporter FPK90_19650 PF00106 short chain dehydrogenase FPK90_19655 PF00356 Bacterial regulatory proteins, lacI family FPK90_19670 PF00128 Alpha amylase, catalytic domain FPK90_19685 PF03193 RsgA GTPase FPK90_19720 PF00593 TonB dependent receptor FPK90_19720 PF07715 TonB-dependent Receptor Plug Domain FPK90_19725 PF01522 Polysaccharide deacetylase FPK90_19730 PF00462 Glutaredoxin FPK90_19745 PF01979 Amidohydrolase family FPK90_19750 PF01979 Amidohydrolase family FPK90_19775 PF02645 Uncharacterised protein, DegV family COG1307 FPK90_19780 PF01327 Polypeptide deformylase FPK90_19790 PF03960 ArsC family FPK90_19815 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) FPK90_19820 PF01270 Glycosyl hydrolases family 8 FPK90_19825 PF03170 Bacterial cellulose synthase subunit FPK90_19830 PF03552 Cellulose synthase FPK90_19830 PF00535 Glycosyl transferase family 2 FPK90_19830 PF07238 PilZ domain FPK90_19845 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FPK90_19845 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FPK90_19890 PF00593 TonB dependent receptor FPK90_19890 PF07715 TonB-dependent Receptor Plug Domain FPK90_19900 PF00392 Bacterial regulatory proteins, gntR family FPK90_19900 PF07702 UTRA domain FPK90_19920 PF03958 Bacterial type II/III secretion system short domain FPK90_19920 PF00263 Bacterial type II and III secretion system protein FPK90_19930 PF10741 Type II secretion system (T2SS), protein M subtype b FPK90_19935 PF05137 Fimbrial assembly protein (PilN) FPK90_19940 PF03934 Type II secretion system (T2SS), protein K FPK90_19950 PF07963 Prokaryotic N-terminal methylation motif FPK90_19955 PF12019 Type II transport protein GspH FPK90_19960 PF08334 Type II secretion system (T2SS), protein G FPK90_19965 PF00482 Type II secretion system (T2SS), protein F FPK90_19970 PF00437 Type II/IV secretion system protein FPK90_19970 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FPK90_19975 PF00082 Subtilase family FPK90_19975 PF04151 Bacterial pre-peptidase C-terminal domain FPK90_19980 PF05662 Coiled stalk of trimeric autotransporter adhesin FPK90_19980 PF03895 YadA-like membrane anchor domain FPK90_19980 PF05658 Head domain of trimeric autotransporter adhesin FPK90_19980 PF13018 Extended Signal Peptide of Type V secretion system FPK90_19985 PF00082 Subtilase family FPK90_19985 PF04151 Bacterial pre-peptidase C-terminal domain FPK90_19990 PF05662 Coiled stalk of trimeric autotransporter adhesin FPK90_19990 PF03895 YadA-like membrane anchor domain FPK90_19990 PF05658 Head domain of trimeric autotransporter adhesin FPK90_19990 PF13018 Extended Signal Peptide of Type V secretion system FPK90_20000 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FPK90_20000 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal FPK90_20000 PF02769 AIR synthase related protein, C-terminal domain FPK90_20015 PF10411 Disulfide bond isomerase protein N-terminus FPK90_20015 PF13098 Thioredoxin-like domain FPK90_20030 PF02899 Phage integrase, N-terminal SAM-like domain FPK90_20030 PF00589 Phage integrase family FPK90_20045 PF03739 Lipopolysaccharide export system permease LptF/LptG FPK90_20055 PF02789 Cytosol aminopeptidase family, N-terminal domain FPK90_20055 PF00883 Cytosol aminopeptidase family, catalytic domain FPK90_20070 PF00133 tRNA synthetases class I (I, L, M and V) FPK90_20070 PF10458 Valyl tRNA synthetase tRNA binding arm FPK90_20070 PF08264 Anticodon-binding domain of tRNA FPK90_20080 PF01464 Transglycosylase SLT domain FPK90_20080 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain FPK90_20100 PF01066 CDP-alcohol phosphatidyltransferase FPK90_20110 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FPK90_20110 PF03129 Anticodon binding domain FPK90_20110 PF04073 Aminoacyl-tRNA editing domain FPK90_20115 PF00816 H-NS histone family FPK90_20125 PF02405 Permease MlaE FPK90_20130 PF00005 ABC transporter FPK90_20135 PF02470 MlaD protein FPK90_20135 PF03886 ABC-type transport auxiliary lipoprotein component FPK90_20155 PF01144 Coenzyme A transferase FPK90_20160 PF01144 Coenzyme A transferase FPK90_20165 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FPK90_20165 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FPK90_20165 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FPK90_20165 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FPK90_20170 PF01050 Mannose-6-phosphate isomerase FPK90_20170 PF00483 Nucleotidyl transferase FPK90_20175 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FPK90_20175 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FPK90_20175 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FPK90_20180 PF04321 RmlD substrate binding domain FPK90_20185 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FPK90_20190 PF00483 Nucleotidyl transferase FPK90_20195 PF16363 GDP-mannose 4,6 dehydratase FPK90_20200 PF01012 Electron transfer flavoprotein domain FPK90_20205 PF01012 Electron transfer flavoprotein domain FPK90_20205 PF00766 Electron transfer flavoprotein FAD-binding domain FPK90_20215 PF00535 Glycosyl transferase family 2 FPK90_20235 PF05050 Methyltransferase FkbM domain FPK90_20245 PF16363 GDP-mannose 4,6 dehydratase FPK90_20250 PF16363 GDP-mannose 4,6 dehydratase FPK90_20255 PF00534 Glycosyl transferases group 1 FPK90_20255 PF13477 Glycosyl transferase 4-like FPK90_20260 PF13847 Methyltransferase domain FPK90_20260 PF00069 Protein kinase domain FPK90_20265 PF00005 ABC transporter FPK90_20275 PF00534 Glycosyl transferases group 1 FPK90_20275 PF13439 Glycosyltransferase Family 4 FPK90_20285 PF01053 Cys/Met metabolism PLP-dependent enzyme FPK90_20290 PF00291 Pyridoxal-phosphate dependent enzyme FPK90_20290 PF00571 CBS domain FPK90_20310 PF00437 Type II/IV secretion system protein FPK90_20315 PF02798 Glutathione S-transferase, N-terminal domain FPK90_20315 PF14497 Glutathione S-transferase, C-terminal domain FPK90_20330 PF00271 Helicase conserved C-terminal domain FPK90_20330 PF00270 DEAD/DEAH box helicase FPK90_20340 PF00593 TonB dependent receptor FPK90_20340 PF07715 TonB-dependent Receptor Plug Domain FPK90_20350 PF01242 6-pyruvoyl tetrahydropterin synthase FPK90_20370 PF13185 GAF domain FPK90_20380 PF00756 Putative esterase FPK90_20385 PF07715 TonB-dependent Receptor Plug Domain FPK90_20385 PF00593 TonB dependent receptor FPK90_20390 PF13419 Haloacid dehalogenase-like hydrolase FPK90_20395 PF11799 impB/mucB/samB family C-terminal domain FPK90_20395 PF00817 impB/mucB/samB family FPK90_20400 PF07977 FabA-like domain FPK90_20405 PF02801 Beta-ketoacyl synthase, C-terminal domain FPK90_20405 PF00109 Beta-ketoacyl synthase, N-terminal domain FPK90_20415 PF01432 Peptidase family M3 FPK90_20430 PF07732 Multicopper oxidase FPK90_20430 PF00394 Multicopper oxidase FPK90_20430 PF07731 Multicopper oxidase FPK90_20435 PF05275 Copper resistance protein B precursor (CopB) FPK90_20440 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FPK90_20470 PF01380 SIS domain FPK90_20475 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FPK90_20480 PF02687 FtsX-like permease family FPK90_20480 PF00005 ABC transporter FPK90_20480 PF12704 MacB-like periplasmic core domain FPK90_20485 PF02687 FtsX-like permease family FPK90_20485 PF12704 MacB-like periplasmic core domain FPK90_20490 PF00005 ABC transporter FPK90_20490 PF12704 MacB-like periplasmic core domain FPK90_20490 PF02687 FtsX-like permease family FPK90_20500 PF00072 Response regulator receiver domain FPK90_20500 PF02954 Bacterial regulatory protein, Fis family FPK90_20500 PF00158 Sigma-54 interaction domain FPK90_20505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_20505 PF00512 His Kinase A (phospho-acceptor) domain FPK90_20510 PF12804 MobA-like NTP transferase domain FPK90_20510 PF00132 Bacterial transferase hexapeptide (six repeats) FPK90_20510 PF14602 Hexapeptide repeat of succinyl-transferase FPK90_20525 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain FPK90_20525 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FPK90_20530 PF02874 ATP synthase alpha/beta family, beta-barrel domain FPK90_20530 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FPK90_20535 PF00231 ATP synthase FPK90_20540 PF02874 ATP synthase alpha/beta family, beta-barrel domain FPK90_20540 PF00306 ATP synthase alpha/beta chain, C terminal domain FPK90_20540 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FPK90_20545 PF00213 ATP synthase delta (OSCP) subunit FPK90_20550 PF00430 ATP synthase B/B' CF(0) FPK90_20555 PF00137 ATP synthase subunit C FPK90_20560 PF00119 ATP synthase A chain FPK90_20580 PF07992 Pyridine nucleotide-disulphide oxidoreductase FPK90_20580 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FPK90_20590 PF02817 e3 binding domain FPK90_20590 PF00364 Biotin-requiring enzyme FPK90_20590 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FPK90_20625 PF03180 NLPA lipoprotein FPK90_20630 PF00528 Binding-protein-dependent transport system inner membrane component FPK90_20635 PF00005 ABC transporter FPK90_20635 PF09383 NIL domain FPK90_20640 PF00892 EamA-like transporter family FPK90_20645 PF04461 Protein of unknown function (DUF520) FPK90_20655 PF18415 Histidine kinase receptor ArcB trans-membrane domain FPK90_20655 PF01627 Hpt domain FPK90_20655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_20655 PF00989 PAS fold FPK90_20655 PF00072 Response regulator receiver domain FPK90_20655 PF00512 His Kinase A (phospho-acceptor) domain FPK90_20680 PF13419 Haloacid dehalogenase-like hydrolase FPK90_20685 PF01479 S4 domain FPK90_20685 PF00849 RNA pseudouridylate synthase FPK90_20690 PF05175 Methyltransferase small domain FPK90_20690 PF08468 Methyltransferase small domain N-terminal FPK90_20700 PF07995 Glucose / Sorbosone dehydrogenase FPK90_20710 PF00512 His Kinase A (phospho-acceptor) domain FPK90_20710 PF00989 PAS fold FPK90_20710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_20730 PF00842 Alanine racemase, C-terminal domain FPK90_20730 PF01168 Alanine racemase, N-terminal domain FPK90_20735 PF01266 FAD dependent oxidoreductase FPK90_20740 PF01037 Lrp/AsnC ligand binding domain FPK90_20750 PF01641 SelR domain FPK90_20760 PF01618 MotA/TolQ/ExbB proton channel family FPK90_20765 PF13677 Membrane MotB of proton-channel complex MotA/MotB FPK90_20765 PF00691 OmpA family FPK90_20790 PF01061 ABC-2 type transporter FPK90_20795 PF00005 ABC transporter FPK90_20800 PF00999 Sodium/hydrogen exchanger family FPK90_20810 PF02469 Fasciclin domain FPK90_20815 PF03167 Uracil DNA glycosylase superfamily FPK90_20825 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase FPK90_20835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FPK90_20835 PF03466 LysR substrate binding domain FPK90_20840 PF03358 NADPH-dependent FMN reductase FPK90_20845 PF00248 Aldo/keto reductase family FPK90_20860 PF05649 Peptidase family M13 FPK90_20860 PF01431 Peptidase family M13 FPK90_20880 PF13520 Amino acid permease FPK90_20890 PF00072 Response regulator receiver domain FPK90_20890 PF04397 LytTr DNA-binding domain FPK90_20895 PF02743 Cache domain FPK90_20895 PF00672 HAMP domain FPK90_20895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_20895 PF06580 Histidine kinase FPK90_20920 PF05974 Domain of unknown function (DUF892) FPK90_20925 PF05067 Manganese containing catalase FPK90_20945 PF08448 PAS fold FPK90_20945 PF03705 CheR methyltransferase, all-alpha domain FPK90_20945 PF01739 CheR methyltransferase, SAM binding domain FPK90_20945 PF01339 CheB methylesterase FPK90_20960 PF02954 Bacterial regulatory protein, Fis family FPK90_20960 PF00072 Response regulator receiver domain FPK90_20960 PF00158 Sigma-54 interaction domain FPK90_20975 PF01654 Cytochrome bd terminal oxidase subunit I FPK90_20980 PF02322 Cytochrome bd terminal oxidase subunit II FPK90_21000 PF16363 GDP-mannose 4,6 dehydratase FPK90_21010 PF03275 UDP-galactopyranose mutase FPK90_21020 PF00005 ABC transporter FPK90_21020 PF00664 ABC transporter transmembrane region FPK90_21035 PF00107 Zinc-binding dehydrogenase FPK90_21035 PF13823 Alcohol dehydrogenase GroES-associated FPK90_21035 PF08240 Alcohol dehydrogenase GroES-like domain FPK90_21080 PF00593 TonB dependent receptor FPK90_21080 PF07715 TonB-dependent Receptor Plug Domain FPK90_21095 PF00005 ABC transporter FPK90_21105 PF03466 LysR substrate binding domain FPK90_21105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FPK90_21110 PF01042 Endoribonuclease L-PSP FPK90_21125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FPK90_21125 PF00672 HAMP domain FPK90_21140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FPK90_21140 PF03466 LysR substrate binding domain FPK90_21145 PF02525 Flavodoxin-like fold FPK90_21190 PF00557 Metallopeptidase family M24 FPK90_21285 PF13356 Arm DNA-binding domain FPK90_21285 PF00589 Phage integrase family FPK90_21300 PF00140 Sigma-70 factor, region 1.2 FPK90_21300 PF04546 Sigma-70, non-essential region FPK90_21300 PF03979 Sigma-70 factor, region 1.1 FPK90_21300 PF04542 Sigma-70 region 2 FPK90_21300 PF04545 Sigma-70, region 4 FPK90_21300 PF04539 Sigma-70 region 3 FPK90_21305 PF02580 D-Tyr-tRNA(Tyr) deacylase FPK90_21310 PF03279 Bacterial lipid A biosynthesis acyltransferase FPK90_21330 PF00925 GTP cyclohydrolase II FPK90_21350 PF00535 Glycosyl transferase family 2 FPK90_21365 PF01189 16S rRNA methyltransferase RsmB/F FPK90_21365 PF01029 NusB family FPK90_21370 PF02911 Formyl transferase, C-terminal domain FPK90_21370 PF00551 Formyl transferase FPK90_21375 PF01327 Polypeptide deformylase FPK90_21380 PF01476 LysM domain FPK90_21385 PF02481 DNA recombination-mediator protein A FPK90_21385 PF17782 DprA winged helix domain FPK90_21390 PF04361 Protein of unknown function (DUF494) FPK90_21405 PF13368 Topoisomerase C-terminal repeat FPK90_21405 PF01131 DNA topoisomerase FPK90_21405 PF01751 Toprim domain FPK90_21410 PF01300 Telomere recombination FPK90_21440 PF01343 Peptidase family S49 FPK90_21445 PF01554 MatE FPK90_21465 PF18074 Primosomal protein N C-terminal domain FPK90_21465 PF00270 DEAD/DEAH box helicase FPK90_21465 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FPK90_21465 PF17764 3′ DNA-binding domain (3′BD) FPK90_21465 PF00271 Helicase conserved C-terminal domain FPK90_21470 PF13417 Glutathione S-transferase, N-terminal domain FPK90_21470 PF00043 Glutathione S-transferase, C-terminal domain FPK90_21485 PF07992 Pyridine nucleotide-disulphide oxidoreductase FPK90_21490 PF03458 UPF0126 domain FPK90_21495 PF04545 Sigma-70, region 4 FPK90_21495 PF04542 Sigma-70 region 2 FPK90_21500 PF03167 Uracil DNA glycosylase superfamily FPK90_21505 PF00072 Response regulator receiver domain FPK90_21510 PF18075 FtsX extracellular domain FPK90_21515 PF00005 ABC transporter FPK90_21520 PF00271 Helicase conserved C-terminal domain FPK90_21520 PF00270 DEAD/DEAH box helicase FPK90_21520 PF12300 ATP-dependent RNA helicase RhlB FPK90_21525 PF00085 Thioredoxin FPK90_21530 PF07498 Rho termination factor, N-terminal domain FPK90_21530 PF07497 Rho termination factor, RNA-binding domain FPK90_21530 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FPK90_21535 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) FPK90_21540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FPK90_21540 PF03466 LysR substrate binding domain FPK90_21550 PF03971 Monomeric isocitrate dehydrogenase FPK90_21560 PF01476 LysM domain FPK90_21560 PF04972 BON domain FPK90_21565 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term FPK90_21565 PF14489 QueF-like protein FPK90_21570 PF01546 Peptidase family M20/M25/M40 FPK90_21570 PF07687 Peptidase dimerisation domain FPK90_21575 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FPK90_21580 PF00873 AcrB/AcrD/AcrF family FPK90_21585 PF00873 AcrB/AcrD/AcrF family FPK90_21590 PF07063 Domain of unknown function (DUF1338) FPK90_21635 PF01427 D-ala-D-ala dipeptidase FPK90_21640 PF01510 N-acetylmuramoyl-L-alanine amidase FPK90_21650 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FPK90_21650 PF13378 Enolase C-terminal domain-like FPK90_21660 PF13520 Amino acid permease FPK90_21675 PF05360 yiaA/B two helix domain FPK90_21685 PF00933 Glycosyl hydrolase family 3 N terminal domain FPK90_21685 PF14310 Fibronectin type III-like domain FPK90_21685 PF01915 Glycosyl hydrolase family 3 C-terminal domain FPK90_21690 PF02152 Dihydroneopterin aldolase FPK90_21695 PF00814 Glycoprotease family FPK90_21700 PF01165 Ribosomal protein S21 FPK90_21705 PF09424 Yqey-like protein FPK90_21715 PF03631 Virulence factor BrkB FPK90_21720 PF08275 DNA primase catalytic core, N-terminal domain FPK90_21720 PF01807 CHC2 zinc finger FPK90_21720 PF08278 DNA primase DnaG DnaB-binding FPK90_21720 PF10410 DnaB-helicase binding domain of primase FPK90_21725 PF13593 SBF-like CPA transporter family (DUF4137) FPK90_21735 PF01040 UbiA prenyltransferase family FPK90_21760 PF00510 Cytochrome c oxidase subunit III FPK90_21765 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 FPK90_21775 PF00115 Cytochrome C and Quinol oxidase polypeptide I FPK90_21780 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FPK90_21780 PF02790 Cytochrome C oxidase subunit II, transmembrane domain FPK90_21790 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FPK90_21790 PF14850 DNA-binding domain of Proline dehydrogenase FPK90_21790 PF00171 Aldehyde dehydrogenase family FPK90_21790 PF01619 Proline dehydrogenase FPK90_21825 PF00579 tRNA synthetases class I (W and Y) FPK90_21830 PF04225 Opacity-associated protein A LysM-like domain FPK90_21830 PF01551 Peptidase family M23 FPK90_21835 PF03702 Anhydro-N-acetylmuramic acid kinase FPK90_21845 PF07690 Major Facilitator Superfamily FPK90_21850 PF03372 Endonuclease/Exonuclease/phosphatase family FPK90_21855 PF00156 Phosphoribosyl transferase domain FPK90_21865 PF13614 AAA domain FPK90_21870 PF17762 HTH domain found in ParB protein FPK90_21870 PF02195 ParB-like nuclease domain FPK90_21885 PF01370 NAD dependent epimerase/dehydratase family FPK90_21890 PF00535 Glycosyl transferase family 2 FPK90_21905 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FPK90_21905 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FPK90_21905 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FPK90_21905 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FPK90_21910 PF00692 dUTPase FPK90_21915 PF04127 DNA / pantothenate metabolism flavoprotein FPK90_21915 PF02441 Flavoprotein FPK90_21920 PF04002 RadC-like JAB domain FPK90_21925 PF00750 tRNA synthetases class I (R) FPK90_21925 PF03485 Arginyl tRNA synthetase N terminal domain FPK90_21925 PF05746 DALR anticodon binding domain FPK90_21940 PF00106 short chain dehydrogenase FPK90_21950 PF03033 Glycosyltransferase family 28 N-terminal domain FPK90_21955 PF13193 AMP-binding enzyme C-terminal domain FPK90_21955 PF00975 Thioesterase domain FPK90_21955 PF00501 AMP-binding enzyme FPK90_21955 PF00550 Phosphopantetheine attachment site FPK90_21955 PF00668 Condensation domain FPK90_21960 PF17810 Arginine decarboxylase helical bundle domain FPK90_21960 PF17944 Arginine decarboxylase C-terminal helical extension FPK90_21960 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FPK90_21965 PF17284 Spermidine synthase tetramerisation domain FPK90_21990 PF00963 Cohesin domain FPK90_21990 PF02838 Glycosyl hydrolase family 20, domain 2 FPK90_21990 PF00041 Fibronectin type III domain FPK90_21990 PF00754 F5/8 type C domain FPK90_21990 PF07555 beta-N-acetylglucosaminidase FPK90_22000 PF00543 Nitrogen regulatory protein P-II FPK90_22005 PF04380 Membrane fusogenic activity FPK90_22010 PF01078 Magnesium chelatase, subunit ChlI FPK90_22010 PF13335 Magnesium chelatase, subunit ChlI C-terminal FPK90_22025 PF00563 EAL domain FPK90_22025 PF12792 CSS motif domain associated with EAL FPK90_22030 PF00487 Fatty acid desaturase FPK90_22035 PF00970 Oxidoreductase FAD-binding domain FPK90_22035 PF00111 2Fe-2S iron-sulfur cluster binding domain FPK90_22035 PF00175 Oxidoreductase NAD-binding domain FPK90_22040 PF00440 Bacterial regulatory proteins, tetR family FPK90_22060 PF01139 tRNA-splicing ligase RtcB FPK90_22095 PF01370 NAD dependent epimerase/dehydratase family FPK90_22095 PF08338 Domain of unknown function (DUF1731) FPK90_22100 PF00486 Transcriptional regulatory protein, C terminal FPK90_22100 PF00072 Response regulator receiver domain FPK90_22105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_22105 PF08521 Two-component sensor kinase N-terminal FPK90_22105 PF00512 His Kinase A (phospho-acceptor) domain FPK90_22135 PF00595 PDZ domain FPK90_22155 PF01594 AI-2E family transporter FPK90_22160 PF13419 Haloacid dehalogenase-like hydrolase FPK90_22165 PF00883 Cytosol aminopeptidase family, catalytic domain FPK90_22165 PF02789 Cytosol aminopeptidase family, N-terminal domain FPK90_22175 PF04542 Sigma-70 region 2 FPK90_22175 PF08281 Sigma-70, region 4 FPK90_22180 PF00199 Catalase FPK90_22195 PF00196 Bacterial regulatory proteins, luxR family FPK90_22195 PF00072 Response regulator receiver domain FPK90_22200 PF07730 Histidine kinase FPK90_22205 PF13533 Biotin-lipoyl like FPK90_22210 PF00005 ABC transporter FPK90_22230 PF00892 EamA-like transporter family FPK90_22235 PF00892 EamA-like transporter family FPK90_22255 PF00753 Metallo-beta-lactamase superfamily FPK90_22260 PF00579 tRNA synthetases class I (W and Y) FPK90_22265 PF05532 CsbD-like FPK90_22280 PF00491 Arginase family FPK90_22310 PF02223 Thymidylate kinase FPK90_22345 PF03309 Type III pantothenate kinase FPK90_22350 PF08279 HTH domain FPK90_22350 PF03099 Biotin/lipoate A/B protein ligase family FPK90_22350 PF02237 Biotin protein ligase C terminal domain FPK90_22365 PF06167 Glucose-regulated metallo-peptidase M90 FPK90_22380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_22380 PF00512 His Kinase A (phospho-acceptor) domain FPK90_22380 PF00672 HAMP domain FPK90_22385 PF00486 Transcriptional regulatory protein, C terminal FPK90_22385 PF00072 Response regulator receiver domain FPK90_22395 PF01207 Dihydrouridine synthase (Dus) FPK90_22415 PF00199 Catalase FPK90_22415 PF06628 Catalase-related immune-responsive FPK90_22425 PF13307 Helicase C-terminal domain FPK90_22425 PF06733 DEAD_2 FPK90_22440 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FPK90_22440 PF01488 Shikimate / quinate 5-dehydrogenase FPK90_22440 PF08501 Shikimate dehydrogenase substrate binding domain FPK90_22450 PF00175 Oxidoreductase NAD-binding domain FPK90_22450 PF00667 FAD binding domain FPK90_22450 PF00258 Flavodoxin FPK90_22460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FPK90_22460 PF03466 LysR substrate binding domain FPK90_22475 PF00490 Delta-aminolevulinic acid dehydratase FPK90_22500 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region FPK90_22500 PF00326 Prolyl oligopeptidase family FPK90_22505 PF02798 Glutathione S-transferase, N-terminal domain FPK90_22505 PF00043 Glutathione S-transferase, C-terminal domain FPK90_22530 PF04820 Tryptophan halogenase FPK90_22545 PF00005 ABC transporter FPK90_22555 PF01381 Helix-turn-helix FPK90_22565 PF01229 Glycosyl hydrolases family 39 FPK90_22570 PF02583 Metal-sensitive transcriptional repressor FPK90_22575 PF16916 Dimerisation domain of Zinc Transporter FPK90_22575 PF01545 Cation efflux family FPK90_22585 PF00593 TonB dependent receptor FPK90_22585 PF07715 TonB-dependent Receptor Plug Domain FPK90_22595 PF12833 Helix-turn-helix domain FPK90_22595 PF01965 DJ-1/PfpI family FPK90_22600 PF00175 Oxidoreductase NAD-binding domain FPK90_22600 PF00970 Oxidoreductase FAD-binding domain FPK90_22600 PF00111 2Fe-2S iron-sulfur cluster binding domain FPK90_22605 PF00005 ABC transporter FPK90_22610 PF01061 ABC-2 type transporter FPK90_22620 PF08546 Ketopantoate reductase PanE/ApbA C terminal FPK90_22620 PF02558 Ketopantoate reductase PanE/ApbA FPK90_22655 PF00268 Ribonucleotide reductase, small chain FPK90_22665 PF00317 Ribonucleotide reductase, all-alpha domain FPK90_22665 PF03477 ATP cone domain FPK90_22665 PF02867 Ribonucleotide reductase, barrel domain FPK90_22680 PF13380 CoA binding domain FPK90_22680 PF00583 Acetyltransferase (GNAT) family FPK90_22680 PF13607 Succinyl-CoA ligase like flavodoxin domain FPK90_22685 PF01769 Divalent cation transporter FPK90_22685 PF00571 CBS domain FPK90_22685 PF03448 MgtE intracellular N domain FPK90_22700 PF00999 Sodium/hydrogen exchanger family FPK90_22700 PF02254 TrkA-N domain FPK90_22705 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FPK90_22705 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FPK90_22710 PF00723 Glycosyl hydrolases family 15 FPK90_22725 PF05166 YcgL domain FPK90_22730 PF02801 Beta-ketoacyl synthase, C-terminal domain FPK90_22730 PF00109 Beta-ketoacyl synthase, N-terminal domain FPK90_22740 PF00535 Glycosyl transferase family 2 FPK90_22785 PF07977 FabA-like domain FPK90_22790 PF01553 Acyltransferase FPK90_22800 PF00550 Phosphopantetheine attachment site FPK90_22805 PF04820 Tryptophan halogenase FPK90_22830 PF00326 Prolyl oligopeptidase family FPK90_22830 PF07676 WD40-like Beta Propeller Repeat FPK90_22850 PF01218 Coproporphyrinogen III oxidase FPK90_22860 PF01367 5'-3' exonuclease, C-terminal SAM fold FPK90_22860 PF00476 DNA polymerase family A FPK90_22860 PF01612 3'-5' exonuclease FPK90_22860 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FPK90_22890 PF00069 Protein kinase domain FPK90_22890 PF03793 PASTA domain FPK90_22930 PF04717 Type VI secretion system, phage-baseplate injector FPK90_22945 PF03793 PASTA domain FPK90_22945 PF00069 Protein kinase domain FPK90_22955 PF08281 Sigma-70, region 4 FPK90_22955 PF04542 Sigma-70 region 2 FPK90_22975 PF00328 Histidine phosphatase superfamily (branch 2) FPK90_22995 PF13018 Extended Signal Peptide of Type V secretion system FPK90_22995 PF05658 Head domain of trimeric autotransporter adhesin FPK90_22995 PF05662 Coiled stalk of trimeric autotransporter adhesin FPK90_22995 PF03895 YadA-like membrane anchor domain FPK90_23050 PF10431 C-terminal, D2-small domain, of ClpB protein FPK90_23050 PF17871 AAA lid domain FPK90_23050 PF07724 AAA domain (Cdc48 subfamily) FPK90_23050 PF00004 ATPase family associated with various cellular activities (AAA) FPK90_23080 PF05638 Type VI secretion system effector, Hcp FPK90_23105 PF14602 Hexapeptide repeat of succinyl-transferase FPK90_23105 PF12464 Maltose acetyltransferase FPK90_23110 PF00580 UvrD/REP helicase N-terminal domain FPK90_23110 PF13361 UvrD-like helicase C-terminal domain FPK90_23125 PF13091 PLD-like domain FPK90_23125 PF13396 Phospholipase_D-nuclease N-terminal FPK90_23130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FPK90_23130 PF03466 LysR substrate binding domain FPK90_23135 PF03737 Aldolase/RraA FPK90_23140 PF04303 PrpF protein FPK90_23150 PF04909 Amidohydrolase FPK90_23155 PF00471 Ribosomal protein L33 FPK90_23160 PF00830 Ribosomal L28 family FPK90_23165 PF00873 AcrB/AcrD/AcrF family FPK90_23175 PF13533 Biotin-lipoyl like FPK90_23195 PF02527 rRNA small subunit methyltransferase G FPK90_23200 PF09423 PhoD-like phosphatase FPK90_23200 PF16655 PhoD-like phosphatase, N-terminal domain FPK90_23205 PF16655 PhoD-like phosphatase, N-terminal domain FPK90_23205 PF09423 PhoD-like phosphatase FPK90_23210 PF01648 4'-phosphopantetheinyl transferase superfamily FPK90_23215 PF04226 Transglycosylase associated protein FPK90_23225 PF03372 Endonuclease/Exonuclease/phosphatase family FPK90_23230 PF00480 ROK family FPK90_23240 PF09312 SurA N-terminal domain FPK90_23240 PF00639 PPIC-type PPIASE domain FPK90_23250 PF00474 Sodium:solute symporter family FPK90_23255 PF04341 Protein of unknown function, DUF485 FPK90_23265 PF16177 Acetyl-coenzyme A synthetase N-terminus FPK90_23265 PF13193 AMP-binding enzyme C-terminal domain FPK90_23265 PF00501 AMP-binding enzyme FPK90_23270 PF00072 Response regulator receiver domain FPK90_23270 PF00196 Bacterial regulatory proteins, luxR family FPK90_23295 PF04616 Glycosyl hydrolases family 43 FPK90_23295 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain FPK90_23305 PF00248 Aldo/keto reductase family FPK90_23320 PF01557 Fumarylacetoacetate (FAA) hydrolase family FPK90_23330 PF13378 Enolase C-terminal domain-like FPK90_23330 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FPK90_23335 PF05336 L-rhamnose mutarotase FPK90_23340 PF07690 Major Facilitator Superfamily FPK90_23345 PF09339 IclR helix-turn-helix domain FPK90_23345 PF01614 Bacterial transcriptional regulator FPK90_23350 PF02659 Putative manganese efflux pump FPK90_23355 PF00512 His Kinase A (phospho-acceptor) domain FPK90_23355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_23370 PF06165 Glycosyltransferase family 36 FPK90_23370 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain FPK90_23390 PF01011 PQQ enzyme repeat FPK90_23390 PF13360 PQQ-like domain FPK90_23390 PF13570 PQQ-like domain FPK90_23410 PF04357 TamB, inner membrane protein subunit of TAM complex FPK90_23415 PF17243 POTRA domain TamA domain 1 FPK90_23415 PF01103 Surface antigen FPK90_23440 PF03412 Peptidase C39 family FPK90_23440 PF00664 ABC transporter transmembrane region FPK90_23440 PF00005 ABC transporter FPK90_23445 PF02092 Glycyl-tRNA synthetase beta subunit FPK90_23445 PF05746 DALR anticodon binding domain FPK90_23450 PF02091 Glycyl-tRNA synthetase alpha subunit FPK90_23455 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FPK90_23455 PF00437 Type II/IV secretion system protein FPK90_23475 PF00117 Glutamine amidotransferase class-I FPK90_23475 PF00958 GMP synthase C terminal domain FPK90_23485 PF00902 Sec-independent protein translocase protein (TatC) FPK90_23490 PF02416 mttA/Hcf106 family FPK90_23495 PF02416 mttA/Hcf106 family FPK90_23505 PF00762 Ferrochelatase FPK90_23510 PF12697 Alpha/beta hydrolase family FPK90_23530 PF04381 Putative exonuclease, RdgC FPK90_23535 PF01171 PP-loop family FPK90_23550 PF00356 Bacterial regulatory proteins, lacI family FPK90_23555 PF07488 Glycosyl hydrolase family 67 middle domain FPK90_23555 PF03648 Glycosyl hydrolase family 67 N-terminus FPK90_23555 PF07477 Glycosyl hydrolase family 67 C-terminus FPK90_23565 PF13378 Enolase C-terminal domain-like FPK90_23565 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FPK90_23570 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain FPK90_23570 PF04616 Glycosyl hydrolases family 43 FPK90_23575 PF07691 PA14 domain FPK90_23575 PF14310 Fibronectin type III-like domain FPK90_23575 PF01915 Glycosyl hydrolase family 3 C-terminal domain FPK90_23575 PF00933 Glycosyl hydrolase family 3 N terminal domain FPK90_23580 PF08125 Mannitol dehydrogenase C-terminal domain FPK90_23580 PF01232 Mannitol dehydrogenase Rossmann domain FPK90_23615 PF00171 Aldehyde dehydrogenase family FPK90_23630 PF00202 Aminotransferase class-III FPK90_23640 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FPK90_23640 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FPK90_23660 PF08450 SMP-30/Gluconolactonase/LRE-like region FPK90_23665 PF00331 Glycosyl hydrolase family 10 FPK90_23675 PF02837 Glycosyl hydrolases family 2, sugar binding domain FPK90_23675 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FPK90_23675 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 FPK90_23675 PF00703 Glycosyl hydrolases family 2 FPK90_23675 PF16355 Domain of unknown function (DUF4982) FPK90_23680 PF02614 Glucuronate isomerase FPK90_23685 PF03422 Carbohydrate binding module (family 6) FPK90_23685 PF00331 Glycosyl hydrolase family 10 FPK90_23685 PF00553 Cellulose binding domain FPK90_23695 PF03422 Carbohydrate binding module (family 6) FPK90_23695 PF00553 Cellulose binding domain FPK90_23695 PF00331 Glycosyl hydrolase family 10 FPK90_23715 PF04616 Glycosyl hydrolases family 43 FPK90_23745 PF02801 Beta-ketoacyl synthase, C-terminal domain FPK90_23745 PF16197 Ketoacyl-synthetase C-terminal extension FPK90_23745 PF00107 Zinc-binding dehydrogenase FPK90_23745 PF08659 KR domain FPK90_23745 PF08240 Alcohol dehydrogenase GroES-like domain FPK90_23745 PF00698 Acyl transferase domain FPK90_23745 PF00550 Phosphopantetheine attachment site FPK90_23745 PF14765 Polyketide synthase dehydratase FPK90_23745 PF00109 Beta-ketoacyl synthase, N-terminal domain FPK90_23750 PF01553 Acyltransferase FPK90_23765 PF00356 Bacterial regulatory proteins, lacI family FPK90_23780 PF04820 Tryptophan halogenase FPK90_23785 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FPK90_23790 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) FPK90_23800 PF04337 Protein of unknown function, DUF480 FPK90_23810 PF13302 Acetyltransferase (GNAT) domain FPK90_23815 PF00580 UvrD/REP helicase N-terminal domain FPK90_23815 PF13361 UvrD-like helicase C-terminal domain FPK90_23820 PF00265 Thymidine kinase FPK90_23825 PF00512 His Kinase A (phospho-acceptor) domain FPK90_23825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FPK90_23825 PF08446 PAS fold FPK90_23825 PF00360 Phytochrome region FPK90_23825 PF01590 GAF domain FPK90_23830 PF04349 Periplasmic glucan biosynthesis protein, MdoG FPK90_23840 PF06827 Zinc finger found in FPG and IleRS FPK90_23840 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FPK90_23840 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FPK90_23870 PF03594 Benzoate membrane transport protein FPK90_23875 PF13426 PAS domain FPK90_23875 PF01590 GAF domain FPK90_23875 PF00360 Phytochrome region FPK90_23875 PF08446 PAS fold FPK90_23880 PF01126 Heme oxygenase FPK90_23885 PF07690 Major Facilitator Superfamily FPK90_23890 PF01263 Aldose 1-epimerase FPK90_23900 PF02810 SEC-C motif FPK90_23905 PF01925 Sulfite exporter TauE/SafE FPK90_23930 PF01227 GTP cyclohydrolase I FPK90_23940 PF07869 Protein of unknown function (DUF1656) FPK90_23945 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FPK90_23945 PF00529 HlyD membrane-fusion protein of T1SS FPK90_23950 PF02321 Outer membrane efflux protein FPK90_23955 PF04632 Fusaric acid resistance protein family FPK90_23960 PF00083 Sugar (and other) transporter FPK90_23965 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family FPK90_23970 PF13396 Phospholipase_D-nuclease N-terminal FPK90_23970 PF13091 PLD-like domain FPK90_23995 PF01850 PIN domain FPK90_24030 PF00849 RNA pseudouridylate synthase FPK90_24045 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FPK90_24045 PF00289 Biotin carboxylase, N-terminal domain FPK90_24045 PF02785 Biotin carboxylase C-terminal domain FPK90_24050 PF01425 Amidase FPK90_24080 PF13538 UvrD-like helicase C-terminal domain FPK90_24085 PF12705 PD-(D/E)XK nuclease superfamily FPK90_24085 PF00580 UvrD/REP helicase N-terminal domain FPK90_24085 PF13361 UvrD-like helicase C-terminal domain FPK90_24090 PF17946 RecC C-terminal domain FPK90_24105 PF00005 ABC transporter FPK90_24110 PF02405 Permease MlaE FPK90_24115 PF02470 MlaD protein FPK90_24120 PF05494 MlaC protein FPK90_24130 PF04333 MlaA lipoprotein FPK90_24140 PF00255 Glutathione peroxidase FPK90_24150 PF02646 RmuC family FPK90_24155 PF00107 Zinc-binding dehydrogenase FPK90_24155 PF08240 Alcohol dehydrogenase GroES-like domain FPK90_24160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FPK90_24160 PF03466 LysR substrate binding domain FPK90_24175 PF00043 Glutathione S-transferase, C-terminal domain FPK90_24175 PF13417 Glutathione S-transferase, N-terminal domain FPK90_24185 PF13520 Amino acid permease FPK90_24190 PF07971 Glycosyl hydrolase family 92 FPK90_24190 PF17678 Glycosyl hydrolase family 92 N-terminal domain FPK90_24200 PF10947 Protein of unknown function (DUF2628) FPK90_24205 PF00990 Diguanylate cyclase, GGDEF domain FPK90_24210 PF17853 GGDEF-like domain FPK90_24210 PF13556 PucR C-terminal helix-turn-helix domain FPK90_24210 PF05651 Putative sugar diacid recognition FPK90_24215 PF02595 Glycerate kinase family FPK90_24220 PF07690 Major Facilitator Superfamily FPK90_24235 PF10672 S-adenosylmethionine-dependent methyltransferase FPK90_24235 PF17785 PUA-like domain FPK90_24245 PF03741 Integral membrane protein TerC family FPK90_24255 PF01694 Rhomboid family FPK90_24260 PF03009 Glycerophosphoryl diester phosphodiesterase family FPK90_24270 PF01569 PAP2 superfamily FPK90_24275 PF10396 GTP-binding protein TrmE N-terminus FPK90_24275 PF01926 50S ribosome-binding GTPase FPK90_24275 PF12631 MnmE helical domain FPK90_24280 PF01522 Polysaccharide deacetylase FPK90_24285 PF14849 YidC periplasmic domain FPK90_24285 PF02096 60Kd inner membrane protein FPK90_24290 PF00825 Ribonuclease P FPK90_24295 PF00468 Ribosomal protein L34 FPK90_24325 PF00239 Resolvase, N terminal domain FPK90_24325 PF02796 Helix-turn-helix domain of resolvase FPK90_24335 PF13180 PDZ domain FPK90_24345 PF07015 VirC1 protein FPK90_24350 PF02796 Helix-turn-helix domain of resolvase FPK90_24350 PF00239 Resolvase, N terminal domain FPK90_24365 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system FPK90_24375 PF03432 Relaxase/Mobilisation nuclease domain FPK90_24390 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FPK90_24465 PF03377 TAL effector repeat FPK90_24490 PF02796 Helix-turn-helix domain of resolvase FPK90_24490 PF00239 Resolvase, N terminal domain FPK90_24500 PF13180 PDZ domain FPK90_24510 PF07015 VirC1 protein FPK90_24515 PF02796 Helix-turn-helix domain of resolvase FPK90_24515 PF00239 Resolvase, N terminal domain FPK90_24530 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system FPK90_24540 PF03432 Relaxase/Mobilisation nuclease domain FPK90_24555 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FPK90_24630 PF03377 TAL effector repeat FPK90_24655 PF00239 Resolvase, N terminal domain FPK90_24655 PF02796 Helix-turn-helix domain of resolvase FPK90_24665 PF13180 PDZ domain FPK90_24680 PF00239 Resolvase, N terminal domain FPK90_24680 PF02796 Helix-turn-helix domain of resolvase