locus-tag class description C2859_00010 PF11638 DnaA N-terminal domain C2859_00010 PF00308 Bacterial dnaA protein C2859_00010 PF08299 Bacterial dnaA protein helix-turn-helix C2859_00015 PF00712 DNA polymerase III beta subunit, N-terminal domain C2859_00015 PF02767 DNA polymerase III beta subunit, central domain C2859_00015 PF02768 DNA polymerase III beta subunit, C-terminal domain C2859_00020 PF02463 RecF/RecN/SMC N terminal domain C2859_00025 PF01751 Toprim domain C2859_00025 PF18053 DNA gyrase B subunit insert domain C2859_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_00025 PF00204 DNA gyrase B C2859_00025 PF00986 DNA gyrase B subunit, carboxyl terminus C2859_00035 PF01435 Peptidase family M48 C2859_00045 PF03544 Gram-negative bacterial TonB protein C-terminal C2859_00050 PF01618 MotA/TolQ/ExbB proton channel family C2859_00055 PF02472 Biopolymer transport protein ExbD/TolR C2859_00060 PF02472 Biopolymer transport protein ExbD/TolR C2859_00065 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ C2859_00075 PF13091 PLD-like domain C2859_00075 PF13396 Phospholipase_D-nuclease N-terminal C2859_00090 PF04055 Radical SAM superfamily C2859_00115 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C2859_00115 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C2859_00120 PF13180 PDZ domain C2859_00120 PF03572 Peptidase family S41 C2859_00125 PF01551 Peptidase family M23 C2859_00135 PF04389 Peptidase family M28 C2859_00145 PF00150 Cellulase (glycosyl hydrolase family 5) C2859_00155 PF00150 Cellulase (glycosyl hydrolase family 5) C2859_00160 PF00150 Cellulase (glycosyl hydrolase family 5) C2859_00170 PF00107 Zinc-binding dehydrogenase C2859_00170 PF08240 Alcohol dehydrogenase GroES-like domain C2859_00175 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C2859_00175 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2859_00180 PF00310 Glutamine amidotransferases class-II C2859_00180 PF04898 Glutamate synthase central domain C2859_00180 PF01645 Conserved region in glutamate synthase C2859_00180 PF01493 GXGXG motif C2859_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2859_00210 PF03466 LysR substrate binding domain C2859_00230 PF02397 Bacterial sugar transferase C2859_00235 PF02350 UDP-N-acetylglucosamine 2-epimerase C2859_00245 PF03808 Glycosyl transferase WecB/TagA/CpsF family C2859_00250 PF13439 Glycosyltransferase Family 4 C2859_00250 PF00534 Glycosyl transferases group 1 C2859_00270 PF00733 Asparagine synthase C2859_00270 PF13537 Glutamine amidotransferase domain C2859_00285 PF16363 GDP-mannose 4,6 dehydratase C2859_00300 PF00664 ABC transporter transmembrane region C2859_00300 PF00005 ABC transporter C2859_00315 PF00733 Asparagine synthase C2859_00315 PF13537 Glutamine amidotransferase domain C2859_00335 PF00685 Sulfotransferase domain C2859_00425 PF00270 DEAD/DEAH box helicase C2859_00425 PF09369 Domain of unknown function (DUF1998) C2859_00425 PF00271 Helicase conserved C-terminal domain C2859_00430 PF03006 Haemolysin-III related C2859_00460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2859_00460 PF03466 LysR substrate binding domain C2859_00480 PF02525 Flavodoxin-like fold C2859_00490 PF05532 CsbD-like C2859_00510 PF16485 Protealysin propeptide C2859_00510 PF02868 Thermolysin metallopeptidase, alpha-helical domain C2859_00510 PF01447 Thermolysin metallopeptidase, catalytic domain C2859_00520 PF13344 Haloacid dehalogenase-like hydrolase C2859_00520 PF00293 NUDIX domain C2859_00535 PF00085 Thioredoxin C2859_00545 PF08946 Osmosensory transporter coiled coil C2859_00545 PF00083 Sugar (and other) transporter C2859_00585 PF07726 ATPase family associated with various cellular activities (AAA) C2859_00585 PF17863 AAA lid domain C2859_00615 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain C2859_00620 PF00155 Aminotransferase class I and II C2859_00625 PF07715 TonB-dependent Receptor Plug Domain C2859_00625 PF00593 TonB dependent receptor C2859_00635 PF07883 Cupin domain C2859_00640 PF00171 Aldehyde dehydrogenase family C2859_00660 PF02735 Ku70/Ku80 beta-barrel domain C2859_00665 PF01070 FMN-dependent dehydrogenase C2859_00675 PF00144 Beta-lactamase C2859_00680 PF07730 Histidine kinase C2859_00685 PF00072 Response regulator receiver domain C2859_00685 PF00196 Bacterial regulatory proteins, luxR family C2859_00705 PF00486 Transcriptional regulatory protein, C terminal C2859_00705 PF18500 CadC C-terminal domain 1 C2859_00710 PF12241 Trans-2-enoyl-CoA reductase catalytic region C2859_00710 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase C2859_00710 PF07055 Enoyl reductase FAD binding domain C2859_00720 PF00294 pfkB family carbohydrate kinase C2859_00750 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C2859_00785 PF00128 Alpha amylase, catalytic domain C2859_00785 PF11896 Domain of unknown function (DUF3416) C2859_00790 PF00128 Alpha amylase, catalytic domain C2859_00790 PF16657 Maltogenic Amylase, C-terminal domain C2859_00795 PF00128 Alpha amylase, catalytic domain C2859_00795 PF02806 Alpha amylase, C-terminal all-beta domain C2859_00795 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C2859_00805 PF00248 Aldo/keto reductase family C2859_00810 PF00135 Carboxylesterase family C2859_00815 PF13472 GDSL-like Lipase/Acylhydrolase family C2859_00815 PF07859 alpha/beta hydrolase fold C2859_00825 PF03480 Bacterial extracellular solute-binding protein, family 7 C2859_00835 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component C2859_00840 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain C2859_00840 PF04616 Glycosyl hydrolases family 43 C2859_00845 PF00356 Bacterial regulatory proteins, lacI family C2859_00865 PF04962 KduI/IolB family C2859_00880 PF00657 GDSL-like Lipase/Acylhydrolase C2859_00895 PF00351 Biopterin-dependent aromatic amino acid hydroxylase C2859_00900 PF01037 Lrp/AsnC ligand binding domain C2859_00905 PF00593 TonB dependent receptor C2859_00905 PF07660 Secretin and TonB N terminus short domain C2859_00905 PF07715 TonB-dependent Receptor Plug Domain C2859_00910 PF01734 Patatin-like phospholipase C2859_00920 PF00005 ABC transporter C2859_00935 PF00005 ABC transporter C2859_00940 PF00528 Binding-protein-dependent transport system inner membrane component C2859_00950 PF12867 DinB superfamily C2859_00950 PF03781 Sulfatase-modifying factor enzyme 1 C2859_00970 PF13657 HipA N-terminal domain C2859_00970 PF07804 HipA-like C-terminal domain C2859_00975 PF01381 Helix-turn-helix C2859_01000 PF10609 NUBPL iron-transfer P-loop NTPase C2859_01000 PF01883 Iron-sulfur cluster assembly protein C2859_01015 PF13091 PLD-like domain C2859_01025 PF03061 Thioesterase superfamily C2859_01055 PF00107 Zinc-binding dehydrogenase C2859_01055 PF08240 Alcohol dehydrogenase GroES-like domain C2859_01065 PF02673 Bacitracin resistance protein BacA C2859_01075 PF00120 Glutamine synthetase, catalytic domain C2859_01075 PF03951 Glutamine synthetase, beta-Grasp domain C2859_01080 PF00543 Nitrogen regulatory protein P-II C2859_01085 PF00909 Ammonium Transporter Family C2859_01090 PF00512 His Kinase A (phospho-acceptor) domain C2859_01090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_01090 PF00989 PAS fold C2859_01095 PF02954 Bacterial regulatory protein, Fis family C2859_01095 PF00072 Response regulator receiver domain C2859_01095 PF00158 Sigma-54 interaction domain C2859_01100 PF00080 Copper/zinc superoxide dismutase (SODC) C2859_01105 PF00080 Copper/zinc superoxide dismutase (SODC) C2859_01115 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C2859_01125 PF02803 Thiolase, C-terminal domain C2859_01125 PF00108 Thiolase, N-terminal domain C2859_01160 PF00581 Rhodanese-like domain C2859_01165 PF02556 Preprotein translocase subunit SecB C2859_01170 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C2859_01170 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C2859_01215 PF01313 Bacterial export proteins, family 3 C2859_01225 PF01312 FlhB HrpN YscU SpaS Family C2859_01230 PF00771 FHIPEP family C2859_01235 PF00460 Flagella basal body rod protein C2859_01235 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C2859_01240 PF00460 Flagella basal body rod protein C2859_01240 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C2859_01255 PF02119 Flagellar P-ring protein C2859_01270 PF02049 Flagellar hook-basal body complex protein FliE C2859_01275 PF01514 Secretory protein of YscJ/FliF family C2859_01275 PF08345 Flagellar M-ring protein C-terminal C2859_01290 PF18269 T3SS EscN ATPase C-terminal domain C2859_01290 PF02874 ATP synthase alpha/beta family, beta-barrel domain C2859_01290 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C2859_01305 PF03963 Flagellar hook capping protein - N-terminal region C2859_01310 PF07559 Flagellar basal body protein FlaE C2859_01310 PF00460 Flagella basal body rod protein C2859_01310 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C2859_01320 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C2859_01330 PF00813 FliP family C2859_01335 PF00140 Sigma-70 factor, region 1.2 C2859_01335 PF04542 Sigma-70 region 2 C2859_01335 PF04545 Sigma-70, region 4 C2859_01335 PF04539 Sigma-70 region 3 C2859_01340 PF00205 Thiamine pyrophosphate enzyme, central domain C2859_01340 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C2859_01340 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C2859_01345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_01350 PF00158 Sigma-54 interaction domain C2859_01350 PF00072 Response regulator receiver domain C2859_01350 PF02954 Bacterial regulatory protein, Fis family C2859_01365 PF07690 Major Facilitator Superfamily C2859_01370 PF00588 SpoU rRNA Methylase family C2859_01385 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C2859_01385 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C2859_01390 PF02661 Fic/DOC family C2859_01390 PF13784 Fic/DOC family N-terminal C2859_01395 PF00561 alpha/beta hydrolase fold C2859_01400 PF03692 Putative zinc- or iron-chelating domain C2859_01405 PF00501 AMP-binding enzyme C2859_01410 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family C2859_01430 PF01820 D-ala D-ala ligase N-terminus C2859_01430 PF07478 D-ala D-ala ligase C-terminus C2859_01440 PF03109 ABC1 family C2859_01450 PF00849 RNA pseudouridylate synthase C2859_01460 PF00472 RF-1 domain C2859_01470 PF01112 Asparaginase C2859_01475 PF01432 Peptidase family M3 C2859_01480 PF12706 Beta-lactamase superfamily domain C2859_01505 PF12833 Helix-turn-helix domain C2859_01510 PF00999 Sodium/hydrogen exchanger family C2859_01515 PF03466 LysR substrate binding domain C2859_01515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2859_01520 PF01274 Malate synthase C2859_01525 PF00463 Isocitrate lyase family C2859_01530 PF00990 Diguanylate cyclase, GGDEF domain C2859_01550 PF00326 Prolyl oligopeptidase family C2859_01555 PF00364 Biotin-requiring enzyme C2859_01555 PF02785 Biotin carboxylase C-terminal domain C2859_01555 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C2859_01555 PF00289 Biotin carboxylase, N-terminal domain C2859_01560 PF01039 Carboxyl transferase domain C2859_01565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C2859_01565 PF02770 Acyl-CoA dehydrogenase, middle domain C2859_01565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C2859_01620 PF02492 CobW/HypB/UreG, nucleotide-binding domain C2859_01620 PF07683 Cobalamin synthesis protein cobW C-terminal domain C2859_01645 PF03969 AFG1-like ATPase C2859_01650 PF01047 MarR family C2859_01655 PF02566 OsmC-like protein C2859_01685 PF00107 Zinc-binding dehydrogenase C2859_01685 PF16884 N-terminal domain of oxidoreductase C2859_01700 PF00849 RNA pseudouridylate synthase C2859_01705 PF00593 TonB dependent receptor C2859_01715 PF08482 ATP-dependent helicase C-terminal C2859_01715 PF00271 Helicase conserved C-terminal domain C2859_01715 PF04408 Helicase associated domain (HA2) C2859_01715 PF00270 DEAD/DEAH box helicase C2859_01725 PF07308 Protein of unknown function (DUF1456) C2859_01730 PF00576 HIUase/Transthyretin family C2859_01735 PF13454 FAD-NAD(P)-binding C2859_01740 PF01014 Uricase C2859_01740 PF09349 OHCU decarboxylase C2859_01755 PF00266 Aminotransferase class-V C2859_01760 PF07687 Peptidase dimerisation domain C2859_01760 PF01546 Peptidase family M20/M25/M40 C2859_01765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2859_01765 PF03466 LysR substrate binding domain C2859_01770 PF07690 Major Facilitator Superfamily C2859_01785 PF01425 Amidase C2859_01790 PF01156 Inosine-uridine preferring nucleoside hydrolase C2859_01800 PF00860 Permease family C2859_01810 PF00111 2Fe-2S iron-sulfur cluster binding domain C2859_01815 PF00355 Rieske [2Fe-2S] domain C2859_01820 PF03466 LysR substrate binding domain C2859_01820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2859_01825 PF01026 TatD related DNase C2859_01840 PF03466 LysR substrate binding domain C2859_01840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2859_01845 PF07690 Major Facilitator Superfamily C2859_01860 PF02146 Sir2 family C2859_01865 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C2859_01870 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C2859_01870 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C2859_01880 PF00551 Formyl transferase C2859_01885 PF00486 Transcriptional regulatory protein, C terminal C2859_01885 PF00072 Response regulator receiver domain C2859_01890 PF00672 HAMP domain C2859_01890 PF00512 His Kinase A (phospho-acceptor) domain C2859_01890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_01895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2859_01895 PF00529 HlyD membrane-fusion protein of T1SS C2859_01900 PF00873 AcrB/AcrD/AcrF family C2859_01905 PF02321 Outer membrane efflux protein C2859_01920 PF02677 Epoxyqueuosine reductase QueH C2859_01925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2859_01925 PF03466 LysR substrate binding domain C2859_01930 PF03358 NADPH-dependent FMN reductase C2859_01940 PF01717 Cobalamin-independent synthase, Catalytic domain C2859_01940 PF08267 Cobalamin-independent synthase, N-terminal domain C2859_01945 PF03812 2-keto-3-deoxygluconate permease C2859_01960 PF05368 NmrA-like family C2859_01965 PF01638 HxlR-like helix-turn-helix C2859_01985 PF03377 TAL effector repeat C2859_02005 PF03377 TAL effector repeat C2859_02025 PF03377 TAL effector repeat C2859_02040 PF13495 Phage integrase, N-terminal SAM-like domain C2859_02040 PF00589 Phage integrase family C2859_02045 PF00920 Dehydratase family C2859_02060 PF00132 Bacterial transferase hexapeptide (six repeats) C2859_02070 PF07690 Major Facilitator Superfamily C2859_02075 PF11871 Domain of unknown function (DUF3391) C2859_02075 PF01966 HD domain C2859_02100 PF00171 Aldehyde dehydrogenase family C2859_02110 PF01494 FAD binding domain C2859_02120 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C2859_02120 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C2859_02125 PF00230 Major intrinsic protein C2859_02130 PF16901 C-terminal domain of alpha-glycerophosphate oxidase C2859_02130 PF01266 FAD dependent oxidoreductase C2859_02135 PF08220 DeoR-like helix-turn-helix domain C2859_02135 PF00455 DeoR C terminal sensor domain C2859_02145 PF00355 Rieske [2Fe-2S] domain C2859_02150 PF01144 Coenzyme A transferase C2859_02155 PF01144 Coenzyme A transferase C2859_02160 PF02803 Thiolase, C-terminal domain C2859_02160 PF00108 Thiolase, N-terminal domain C2859_02165 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal C2859_02165 PF00775 Dioxygenase C2859_02170 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal C2859_02170 PF00775 Dioxygenase C2859_02175 PF00206 Lyase C2859_02175 PF10397 Adenylosuccinate lyase C-terminus C2859_02180 PF12146 Serine aminopeptidase, S33 C2859_02185 PF02627 Carboxymuconolactone decarboxylase family C2859_02200 PF09339 IclR helix-turn-helix domain C2859_02200 PF01614 Bacterial transcriptional regulator C2859_02210 PF07859 alpha/beta hydrolase fold C2859_02215 PF10677 Protein of unknown function (DUF2490) C2859_02220 PF01134 Glucose inhibited division protein A C2859_02220 PF13932 GidA associated domain C2859_02230 PF00291 Pyridoxal-phosphate dependent enzyme C2859_02250 PF13649 Methyltransferase domain C2859_02260 PF12697 Alpha/beta hydrolase family C2859_02270 PF00155 Aminotransferase class I and II C2859_02275 PF04055 Radical SAM superfamily C2859_02275 PF06968 Biotin and Thiamin Synthesis associated domain C2859_02285 PF01040 UbiA prenyltransferase family C2859_02310 PF05819 NolX protein C2859_02350 PF01313 Bacterial export proteins, family 3 C2859_02355 PF00813 FliP family C2859_02370 PF00771 FHIPEP family C2859_02375 PF01312 FlhB HrpN YscU SpaS Family C2859_02390 PF01514 Secretory protein of YscJ/FliF family C2859_02405 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C2859_02405 PF18269 T3SS EscN ATPase C-terminal domain C2859_02405 PF02874 ATP synthase alpha/beta family, beta-barrel domain C2859_02415 PF01311 Bacterial export proteins, family 1 C2859_02430 PF01464 Transglycosylase SLT domain C2859_02460 PF03109 ABC1 family C2859_02470 PF05661 Protein of unknown function (DUF808) C2859_02475 PF00072 Response regulator receiver domain C2859_02475 PF00990 Diguanylate cyclase, GGDEF domain C2859_02480 PF00534 Glycosyl transferases group 1 C2859_02480 PF08323 Starch synthase catalytic domain C2859_02485 PF00128 Alpha amylase, catalytic domain C2859_02485 PF02806 Alpha amylase, C-terminal all-beta domain C2859_02485 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C2859_02490 PF11941 Domain of unknown function (DUF3459) C2859_02490 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C2859_02490 PF00128 Alpha amylase, catalytic domain C2859_02495 PF02446 4-alpha-glucanotransferase C2859_02500 PF00128 Alpha amylase, catalytic domain C2859_02510 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C2859_02510 PF00128 Alpha amylase, catalytic domain C2859_02515 PF13460 NAD(P)H-binding C2859_02530 PF06903 VirK protein C2859_02545 PF00270 DEAD/DEAH box helicase C2859_02545 PF00271 Helicase conserved C-terminal domain C2859_02550 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C2859_02550 PF00364 Biotin-requiring enzyme C2859_02560 PF02780 Transketolase, C-terminal domain C2859_02560 PF02779 Transketolase, pyrimidine binding domain C2859_02565 PF00676 Dehydrogenase E1 component C2859_02575 PF03301 Tryptophan 2,3-dioxygenase C2859_02580 PF00854 POT family C2859_02590 PF01047 MarR family C2859_02595 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C2859_02600 PF04480 Protein of unknown function (DUF559) C2859_02605 PF04209 homogentisate 1,2-dioxygenase C2859_02625 PF03334 Na+/H+ antiporter subunit C2859_02630 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) C2859_02640 PF00361 Proton-conducting membrane transporter C2859_02645 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C2859_02650 PF13244 Domain of unknown function (DUF4040) C2859_02650 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter C2859_02650 PF00361 Proton-conducting membrane transporter C2859_02650 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C2859_02665 PF02868 Thermolysin metallopeptidase, alpha-helical domain C2859_02665 PF01447 Thermolysin metallopeptidase, catalytic domain C2859_02665 PF01483 Proprotein convertase P-domain C2859_02665 PF07504 Fungalysin/Thermolysin Propeptide Motif C2859_02675 PF00182 Chitinase class I C2859_02700 PF01259 SAICAR synthetase C2859_02705 PF05099 Tellurite resistance protein TerB C2859_02705 PF00226 DnaJ domain C2859_02715 PF00834 Ribulose-phosphate 3 epimerase family C2859_02720 PF00583 Acetyltransferase (GNAT) family C2859_02725 PF00781 Diacylglycerol kinase catalytic domain C2859_02730 PF00425 chorismate binding enzyme C2859_02730 PF04715 Anthranilate synthase component I, N terminal region C2859_02740 PF00117 Glutamine amidotransferase class-I C2859_02755 PF00591 Glycosyl transferase family, a/b domain C2859_02755 PF02885 Glycosyl transferase family, helical bundle domain C2859_02760 PF00218 Indole-3-glycerol phosphate synthase C2859_02770 PF00325 Bacterial regulatory proteins, crp family C2859_02770 PF00027 Cyclic nucleotide-binding domain C2859_02775 PF02675 S-adenosylmethionine decarboxylase C2859_02780 PF00893 Small Multidrug Resistance protein C2859_02785 PF03232 Ubiquinone biosynthesis protein COQ7 C2859_02790 PF00572 Ribosomal protein L13 C2859_02795 PF00380 Ribosomal protein S9/S16 C2859_02810 PF00293 NUDIX domain C2859_02820 PF00210 Ferritin-like domain C2859_02825 PF00072 Response regulator receiver domain C2859_02825 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C2859_02825 PF00512 His Kinase A (phospho-acceptor) domain C2859_02825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_02825 PF01627 Hpt domain C2859_02825 PF00672 HAMP domain C2859_02830 PF00486 Transcriptional regulatory protein, C terminal C2859_02830 PF00072 Response regulator receiver domain C2859_02850 PF01521 Iron-sulphur cluster biosynthesis C2859_02865 PF00293 NUDIX domain C2859_02865 PF09297 NADH pyrophosphatase zinc ribbon domain C2859_02865 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain C2859_02870 PF03186 CobD/Cbib protein C2859_02870 PF17113 Regulatory signalling modulator protein AmpE C2859_02885 PF07690 Major Facilitator Superfamily C2859_02895 PF07690 Major Facilitator Superfamily C2859_02900 PF12805 FUSC-like inner membrane protein yccS C2859_02910 PF02843 Phosphoribosylglycinamide synthetase, C domain C2859_02910 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain C2859_02910 PF02844 Phosphoribosylglycinamide synthetase, N domain C2859_02920 PF02142 MGS-like domain C2859_02920 PF01808 AICARFT/IMPCHase bienzyme C2859_02925 PF01066 CDP-alcohol phosphatidyltransferase C2859_02930 PF12146 Serine aminopeptidase, S33 C2859_02930 PF12147 Putative methyltransferase C2859_02935 PF00782 Dual specificity phosphatase, catalytic domain C2859_02965 PF02954 Bacterial regulatory protein, Fis family C2859_02980 PF01381 Helix-turn-helix C2859_03015 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C2859_03015 PF00289 Biotin carboxylase, N-terminal domain C2859_03015 PF02785 Biotin carboxylase C-terminal domain C2859_03025 PF00364 Biotin-requiring enzyme C2859_03030 PF01220 Dehydroquinase class II C2859_03035 PF02683 Cytochrome C biogenesis protein transmembrane region C2859_03035 PF11412 Disulphide bond corrector protein DsbC C2859_03040 PF03091 CutA1 divalent ion tolerance protein C2859_03055 PF01852 START domain C2859_03070 PF00106 short chain dehydrogenase C2859_03075 PF04231 Endonuclease I C2859_03085 PF00166 Chaperonin 10 Kd subunit C2859_03090 PF00118 TCP-1/cpn60 chaperonin family C2859_03100 PF07715 TonB-dependent Receptor Plug Domain C2859_03100 PF00593 TonB dependent receptor C2859_03105 PF00793 DAHP synthetase I family C2859_03120 PF08450 SMP-30/Gluconolactonase/LRE-like region C2859_03130 PF08335 GlnD PII-uridylyltransferase C2859_03130 PF03710 Glutamate-ammonia ligase adenylyltransferase C2859_03135 PF02592 Putative vitamin uptake transporter C2859_03155 PF00881 Nitroreductase family C2859_03160 PF04264 YceI-like domain C2859_03185 PF16957 Malonate decarboxylase, alpha subunit, transporter C2859_03190 PF06857 Malonate decarboxylase delta subunit (MdcD) C2859_03195 PF01039 Carboxyl transferase domain C2859_03205 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG C2859_03210 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase C2859_03215 PF00698 Acyl transferase domain C2859_03215 PF16197 Ketoacyl-synthetase C-terminal extension C2859_03215 PF00109 Beta-ketoacyl synthase, N-terminal domain C2859_03215 PF02801 Beta-ketoacyl synthase, C-terminal domain C2859_03215 PF08659 KR domain C2859_03215 PF00550 Phosphopantetheine attachment site C2859_03225 PF00392 Bacterial regulatory proteins, gntR family C2859_03225 PF07729 FCD domain C2859_03230 PF13419 Haloacid dehalogenase-like hydrolase C2859_03260 PF07745 Glycosyl hydrolase family 53 C2859_03265 PF00456 Transketolase, thiamine diphosphate binding domain C2859_03265 PF17831 Pyruvate dehydrogenase E1 component middle domain C2859_03275 PF00145 C-5 cytosine-specific DNA methylase C2859_03355 PF00106 short chain dehydrogenase C2859_03370 PF00106 short chain dehydrogenase C2859_03380 PF13409 Glutathione S-transferase, N-terminal domain C2859_03400 PF03176 MMPL family C2859_03400 PF12823 Domain of unknown function (DUF3817) C2859_03410 PF00326 Prolyl oligopeptidase family C2859_03410 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region C2859_03420 PF07759 Protein of unknown function (DUF1615) C2859_03430 PF00990 Diguanylate cyclase, GGDEF domain C2859_03430 PF05230 MASE2 domain C2859_03455 PF00892 EamA-like transporter family C2859_03460 PF00497 Bacterial extracellular solute-binding proteins, family 3 C2859_03470 PF00324 Amino acid permease C2859_03480 PF01544 CorA-like Mg2+ transporter protein C2859_03490 PF01204 Trehalase C2859_03505 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain C2859_03505 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain C2859_03535 PF00563 EAL domain C2859_03535 PF08448 PAS fold C2859_03535 PF08447 PAS fold C2859_03535 PF00990 Diguanylate cyclase, GGDEF domain C2859_03540 PF02203 Tar ligand binding domain homologue C2859_03540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2859_03540 PF00672 HAMP domain C2859_03545 PF00150 Cellulase (glycosyl hydrolase family 5) C2859_03545 PF00553 Cellulose binding domain C2859_03550 PF00916 Sulfate permease family C2859_03550 PF01740 STAS domain C2859_03560 PF00990 Diguanylate cyclase, GGDEF domain C2859_03560 PF08448 PAS fold C2859_03580 PF13632 Glycosyl transferase family group 2 C2859_03590 PF06580 Histidine kinase C2859_03590 PF07694 5TMR of 5TMR-LYT C2859_03595 PF00072 Response regulator receiver domain C2859_03595 PF04397 LytTr DNA-binding domain C2859_03600 PF03900 Porphobilinogen deaminase, C-terminal domain C2859_03600 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain C2859_03630 PF00326 Prolyl oligopeptidase family C2859_03630 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain C2859_03640 PF00155 Aminotransferase class I and II C2859_03645 PF00326 Prolyl oligopeptidase family C2859_03645 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain C2859_03650 PF04304 Protein of unknown function (DUF454) C2859_03660 PF01678 Diaminopimelate epimerase C2859_03670 PF00589 Phage integrase family C2859_03670 PF02899 Phage integrase, N-terminal SAM-like domain C2859_03675 PF00227 Proteasome subunit C2859_03680 PF10431 C-terminal, D2-small domain, of ClpB protein C2859_03680 PF07724 AAA domain (Cdc48 subfamily) C2859_03680 PF00004 ATPase family associated with various cellular activities (AAA) C2859_03690 PF13673 Acetyltransferase (GNAT) domain C2859_03695 PF13533 Biotin-lipoyl like C2859_03705 PF01209 ubiE/COQ5 methyltransferase family C2859_03710 PF00563 EAL domain C2859_03710 PF00990 Diguanylate cyclase, GGDEF domain C2859_03710 PF03707 Bacterial signalling protein N terminal repeat C2859_03715 PF01433 Peptidase family M1 domain C2859_03715 PF11838 ERAP1-like C-terminal domain C2859_03735 PF13360 PQQ-like domain C2859_03740 PF00497 Bacterial extracellular solute-binding proteins, family 3 C2859_03755 PF00107 Zinc-binding dehydrogenase C2859_03755 PF08240 Alcohol dehydrogenase GroES-like domain C2859_03765 PF01590 GAF domain C2859_03765 PF02954 Bacterial regulatory protein, Fis family C2859_03765 PF00158 Sigma-54 interaction domain C2859_03770 PF00294 pfkB family carbohydrate kinase C2859_03780 PF04085 rod shape-determining protein MreC C2859_03790 PF00905 Penicillin binding protein transpeptidase domain C2859_03790 PF03717 Penicillin-binding Protein dimerisation domain C2859_03795 PF01098 Cell cycle protein C2859_03800 PF00295 Glycosyl hydrolases family 28 C2859_03805 PF13406 Transglycosylase SLT domain C2859_03810 PF05036 Sporulation related domain C2859_03810 PF03330 Lytic transglycolase C2859_03820 PF07943 Penicillin-binding protein 5, C-terminal domain C2859_03820 PF00768 D-alanyl-D-alanine carboxypeptidase C2859_03830 PF04359 Protein of unknown function (DUF493) C2859_03835 PF03099 Biotin/lipoate A/B protein ligase family C2859_03840 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family C2859_03840 PF04055 Radical SAM superfamily C2859_03845 PF11818 C-terminal domain of tail specific protease (DUF3340) C2859_03845 PF00595 PDZ domain C2859_03845 PF03572 Peptidase family S41 C2859_03845 PF17804 Tail specific protease N-terminal domain C2859_03855 PF03466 LysR substrate binding domain C2859_03855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2859_03865 PF00293 NUDIX domain C2859_03865 PF01467 Cytidylyltransferase-like C2859_03900 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain C2859_03900 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C2859_03905 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C2859_03905 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C2859_03910 PF04972 BON domain C2859_03915 PF00360 Phytochrome region C2859_03915 PF08446 PAS fold C2859_03915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_03915 PF01590 GAF domain C2859_03915 PF00512 His Kinase A (phospho-acceptor) domain C2859_03920 PF00072 Response regulator receiver domain C2859_03925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_03925 PF00512 His Kinase A (phospho-acceptor) domain C2859_03930 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C2859_03980 PF00263 Bacterial type II and III secretion system protein C2859_03980 PF03958 Bacterial type II/III secretion system short domain C2859_03985 PF00437 Type II/IV secretion system protein C2859_03990 PF00482 Type II secretion system (T2SS), protein F C2859_03995 PF08334 Type II secretion system (T2SS), protein G C2859_03995 PF07963 Prokaryotic N-terminal methylation motif C2859_04005 PF07963 Prokaryotic N-terminal methylation motif C2859_04005 PF02501 Type II secretion system (T2SS), protein I C2859_04010 PF07963 Prokaryotic N-terminal methylation motif C2859_04010 PF11612 Type II secretion system (T2SS), protein J C2859_04015 PF03934 Type II secretion system (T2SS), protein K C2859_04040 PF16355 Domain of unknown function (DUF4982) C2859_04040 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 C2859_04040 PF00703 Glycosyl hydrolases family 2 C2859_04040 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C2859_04040 PF02837 Glycosyl hydrolases family 2, sugar binding domain C2859_04060 PF07690 Major Facilitator Superfamily C2859_04065 PF00356 Bacterial regulatory proteins, lacI family C2859_04070 PF01380 SIS domain C2859_04075 PF01979 Amidohydrolase family C2859_04085 PF01966 HD domain C2859_04085 PF12627 Probable RNA and SrmB- binding site of polymerase A C2859_04085 PF01743 Poly A polymerase head domain C2859_04090 PF00732 GMC oxidoreductase C2859_04090 PF05199 GMC oxidoreductase C2859_04095 PF00171 Aldehyde dehydrogenase family C2859_04100 PF02028 BCCT, betaine/carnitine/choline family transporter C2859_04115 PF01323 DSBA-like thioredoxin domain C2859_04125 PF00034 Cytochrome c C2859_04130 PF01926 50S ribosome-binding GTPase C2859_04135 PF10996 Beta-Casp domain C2859_04135 PF00753 Metallo-beta-lactamase superfamily C2859_04135 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain C2859_04150 PF04107 Glutamate-cysteine ligase family 2(GCS2) C2859_04155 PF00512 His Kinase A (phospho-acceptor) domain C2859_04155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_04155 PF00672 HAMP domain C2859_04160 PF00486 Transcriptional regulatory protein, C terminal C2859_04160 PF00072 Response regulator receiver domain C2859_04175 PF02583 Metal-sensitive transcriptional repressor C2859_04180 PF00107 Zinc-binding dehydrogenase C2859_04180 PF08240 Alcohol dehydrogenase GroES-like domain C2859_04185 PF04828 Glutathione-dependent formaldehyde-activating enzyme C2859_04190 PF00756 Putative esterase C2859_04200 PF00155 Aminotransferase class I and II C2859_04200 PF00392 Bacterial regulatory proteins, gntR family C2859_04205 PF02567 Phenazine biosynthesis-like protein C2859_04220 PF12848 ABC transporter C2859_04220 PF00005 ABC transporter C2859_04230 PF00464 Serine hydroxymethyltransferase C2859_04235 PF03477 ATP cone domain C2859_04245 PF01872 RibD C-terminal domain C2859_04245 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C2859_04255 PF00677 Lumazine binding domain C2859_04260 PF00925 GTP cyclohydrolase II C2859_04260 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C2859_04265 PF00885 6,7-dimethyl-8-ribityllumazine synthase C2859_04270 PF01029 NusB family C2859_04275 PF00586 AIR synthase related protein, N-terminal domain C2859_04275 PF02769 AIR synthase related protein, C-terminal domain C2859_04300 PF03814 Potassium-transporting ATPase A subunit C2859_04310 PF02669 K+-transporting ATPase, c chain C2859_04315 PF02702 Osmosensitive K+ channel His kinase sensor domain C2859_04315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_04315 PF13492 GAF domain C2859_04315 PF00512 His Kinase A (phospho-acceptor) domain C2859_04315 PF13493 Domain of unknown function (DUF4118) C2859_04320 PF00072 Response regulator receiver domain C2859_04320 PF00486 Transcriptional regulatory protein, C terminal C2859_04335 PF01565 FAD binding domain C2859_04335 PF02913 FAD linked oxidases, C-terminal domain C2859_04340 PF04307 LexA-binding, inner membrane-associated putative hydrolase C2859_04345 PF02021 Uncharacterised protein family UPF0102 C2859_04355 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C2859_04380 PF02381 MraZ protein, putative antitoxin-like C2859_04385 PF01795 MraW methylase family C2859_04390 PF04999 Cell division protein FtsL C2859_04395 PF00905 Penicillin binding protein transpeptidase domain C2859_04395 PF03717 Penicillin-binding Protein dimerisation domain C2859_04400 PF08245 Mur ligase middle domain C2859_04400 PF02875 Mur ligase family, glutamate ligase domain C2859_04400 PF01225 Mur ligase family, catalytic domain C2859_04405 PF02875 Mur ligase family, glutamate ligase domain C2859_04405 PF01225 Mur ligase family, catalytic domain C2859_04405 PF08245 Mur ligase middle domain C2859_04410 PF00953 Glycosyl transferase family 4 C2859_04415 PF01098 Cell cycle protein C2859_04420 PF04101 Glycosyltransferase family 28 C-terminal domain C2859_04420 PF03033 Glycosyltransferase family 28 N-terminal domain C2859_04425 PF08245 Mur ligase middle domain C2859_04425 PF02875 Mur ligase family, glutamate ligase domain C2859_04425 PF01225 Mur ligase family, catalytic domain C2859_04430 PF01820 D-ala D-ala ligase N-terminus C2859_04430 PF07478 D-ala D-ala ligase C-terminus C2859_04435 PF08478 POTRA domain, FtsQ-type C2859_04435 PF03799 Cell division protein FtsQ C2859_04440 PF02491 SHS2 domain inserted in FTSA C2859_04445 PF00091 Tubulin/FtsZ family, GTPase domain C2859_04445 PF12327 FtsZ family, C-terminal domain C2859_04450 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase C2859_04460 PF08525 Opacity-associated protein A N-terminal motif C2859_04460 PF01476 LysM domain C2859_04460 PF01551 Peptidase family M23 C2859_04465 PF02810 SEC-C motif C2859_04465 PF07516 SecA Wing and Scaffold domain C2859_04465 PF07517 SecA DEAD-like domain C2859_04465 PF01043 SecA preprotein cross-linking domain C2859_04470 PF00293 NUDIX domain C2859_04480 PF02219 Methylenetetrahydrofolate reductase C2859_04495 PF00698 Acyl transferase domain C2859_04495 PF08240 Alcohol dehydrogenase GroES-like domain C2859_04495 PF00107 Zinc-binding dehydrogenase C2859_04495 PF08659 KR domain C2859_04495 PF16197 Ketoacyl-synthetase C-terminal extension C2859_04495 PF14765 Polyketide synthase dehydratase C2859_04495 PF02801 Beta-ketoacyl synthase, C-terminal domain C2859_04495 PF00550 Phosphopantetheine attachment site C2859_04495 PF00109 Beta-ketoacyl synthase, N-terminal domain C2859_04500 PF00082 Subtilase family C2859_04500 PF09286 Pro-kumamolisin, activation domain C2859_04520 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C2859_04525 PF00128 Alpha amylase, catalytic domain C2859_04555 PF13649 Methyltransferase domain C2859_04560 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain C2859_04560 PF05221 S-adenosyl-L-homocysteine hydrolase C2859_04570 PF00311 Phosphoenolpyruvate carboxylase C2859_04605 PF00328 Histidine phosphatase superfamily (branch 2) C2859_04615 PF00438 S-adenosylmethionine synthetase, N-terminal domain C2859_04615 PF02772 S-adenosylmethionine synthetase, central domain C2859_04615 PF02773 S-adenosylmethionine synthetase, C-terminal domain C2859_04625 PF13649 Methyltransferase domain C2859_04630 PF01207 Dihydrouridine synthase (Dus) C2859_04640 PF00294 pfkB family carbohydrate kinase C2859_04645 PF07670 Nucleoside recognition C2859_04645 PF01773 Na+ dependent nucleoside transporter N-terminus C2859_04645 PF07662 Na+ dependent nucleoside transporter C-terminus C2859_04655 PF00248 Aldo/keto reductase family C2859_04665 PF00593 TonB dependent receptor C2859_04665 PF07715 TonB-dependent Receptor Plug Domain C2859_04685 PF00528 Binding-protein-dependent transport system inner membrane component C2859_04690 PF00005 ABC transporter C2859_04700 PF02668 Taurine catabolism dioxygenase TauD, TfdA family C2859_04710 PF00005 ABC transporter C2859_04715 PF13472 GDSL-like Lipase/Acylhydrolase family C2859_04720 PF00486 Transcriptional regulatory protein, C terminal C2859_04720 PF00072 Response regulator receiver domain C2859_04725 PF00512 His Kinase A (phospho-acceptor) domain C2859_04725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_04725 PF08521 Two-component sensor kinase N-terminal C2859_04740 PF01219 Prokaryotic diacylglycerol kinase C2859_04760 PF01790 Prolipoprotein diacylglyceryl transferase C2859_04765 PF00303 Thymidylate synthase C2859_04775 PF00186 Dihydrofolate reductase C2859_04780 PF00158 Sigma-54 interaction domain C2859_04785 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C2859_04785 PF08028 Acyl-CoA dehydrogenase, C-terminal domain C2859_04790 PF00005 ABC transporter C2859_04795 PF00528 Binding-protein-dependent transport system inner membrane component C2859_04805 PF00296 Luciferase-like monooxygenase C2859_04810 PF03358 NADPH-dependent FMN reductase C2859_04835 PF00296 Luciferase-like monooxygenase C2859_04840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C2859_04845 PF00528 Binding-protein-dependent transport system inner membrane component C2859_04855 PF00005 ABC transporter C2859_04855 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C2859_04860 PF00149 Calcineurin-like phosphoesterase C2859_04865 PF04379 ApaG domain C2859_04870 PF00398 Ribosomal RNA adenine dimethylase C2859_04875 PF04166 Pyridoxal phosphate biosynthetic protein PdxA C2859_04880 PF09312 SurA N-terminal domain C2859_04880 PF00639 PPIC-type PPIASE domain C2859_04885 PF03968 OstA-like protein C2859_04885 PF04453 LPS transport system D C2859_04890 PF00850 Histone deacetylase domain C2859_04895 PF01923 Cobalamin adenosyltransferase C2859_04910 PF01494 FAD binding domain C2859_04915 PF01494 FAD binding domain C2859_04935 PF07729 FCD domain C2859_04935 PF00392 Bacterial regulatory proteins, gntR family C2859_04940 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase C2859_04945 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase C2859_04945 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit C2859_04950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2859_04950 PF03466 LysR substrate binding domain C2859_04955 PF00501 AMP-binding enzyme C2859_04955 PF13193 AMP-binding enzyme C-terminal domain C2859_04960 PF00171 Aldehyde dehydrogenase family C2859_04965 PF00378 Enoyl-CoA hydratase/isomerase C2859_04985 PF08450 SMP-30/Gluconolactonase/LRE-like region C2859_04990 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C2859_04990 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C2859_05000 PF18125 RlmM ferredoxin-like domain C2859_05000 PF01728 FtsJ-like methyltransferase C2859_05020 PF00892 EamA-like transporter family C2859_05030 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain C2859_05030 PF00749 tRNA synthetases class I (E and Q), catalytic domain C2859_05045 PF00990 Diguanylate cyclase, GGDEF domain C2859_05045 PF00072 Response regulator receiver domain C2859_05050 PF00672 HAMP domain C2859_05050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_05050 PF01627 Hpt domain C2859_05050 PF00072 Response regulator receiver domain C2859_05050 PF00512 His Kinase A (phospho-acceptor) domain C2859_05050 PF17149 Periplasmic sensor domain found in signal transduction proteins C2859_05055 PF00196 Bacterial regulatory proteins, luxR family C2859_05055 PF00072 Response regulator receiver domain C2859_05065 PF01625 Peptide methionine sulfoxide reductase C2859_05075 PF00923 Transaldolase/Fructose-6-phosphate aldolase C2859_05080 PF01272 Transcription elongation factor, GreA/GreB, C-term C2859_05080 PF14760 Rnk N-terminus C2859_05090 PF03466 LysR substrate binding domain C2859_05090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2859_05095 PF13192 Thioredoxin domain C2859_05095 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2859_05100 PF00578 AhpC/TSA family C2859_05100 PF10417 C-terminal domain of 1-Cys peroxiredoxin C2859_05105 PF05175 Methyltransferase small domain C2859_05105 PF17827 PrmC N-terminal domain C2859_05110 PF00561 alpha/beta hydrolase fold C2859_05120 PF00293 NUDIX domain C2859_05125 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C2859_05125 PF01367 5'-3' exonuclease, C-terminal SAM fold C2859_05125 PF00476 DNA polymerase family A C2859_05125 PF01612 3'-5' exonuclease C2859_05155 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C2859_05155 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch C2859_05155 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C2859_05175 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch C2859_05180 PF02233 NAD(P) transhydrogenase beta subunit C2859_05195 PF01063 Amino-transferase class IV C2859_05200 PF00082 Subtilase family C2859_05200 PF04151 Bacterial pre-peptidase C-terminal domain C2859_05205 PF00082 Subtilase family C2859_05205 PF04151 Bacterial pre-peptidase C-terminal domain C2859_05210 PF00082 Subtilase family C2859_05210 PF04151 Bacterial pre-peptidase C-terminal domain C2859_05215 PF04073 Aminoacyl-tRNA editing domain C2859_05225 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain C2859_05225 PF17189 Glycosyl hydrolase family 30 beta sandwich domain C2859_05235 PF03358 NADPH-dependent FMN reductase C2859_05240 PF03631 Virulence factor BrkB C2859_05245 PF08534 Redoxin C2859_05250 PF00708 Acylphosphatase C2859_05260 PF03976 Polyphosphate kinase 2 (PPK2) C2859_05265 PF00994 Probable molybdopterin binding domain C2859_05275 PF03462 PCRF domain C2859_05275 PF00472 RF-1 domain C2859_05280 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain C2859_05280 PF01488 Shikimate / quinate 5-dehydrogenase C2859_05280 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain C2859_05290 PF03550 Outer membrane lipoprotein LolB C2859_05295 PF08544 GHMP kinases C terminal C2859_05295 PF00288 GHMP kinases N terminal domain C2859_05305 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C2859_05305 PF14572 Phosphoribosyl synthetase-associated domain C2859_05310 PF01386 Ribosomal L25p family C2859_05310 PF14693 Ribosomal protein TL5, C-terminal domain C2859_05315 PF01195 Peptidyl-tRNA hydrolase C2859_05320 PF01926 50S ribosome-binding GTPase C2859_05320 PF06071 Protein of unknown function (DUF933) C2859_05340 PF03143 Elongation factor Tu C-terminal domain C2859_05340 PF00009 Elongation factor Tu GTP binding domain C2859_05340 PF03144 Elongation factor Tu domain 2 C2859_05350 PF00584 SecE/Sec61-gamma subunits of protein translocation complex C2859_05355 PF00467 KOW motif C2859_05355 PF02357 Transcription termination factor nusG C2859_05360 PF00298 Ribosomal protein L11, RNA binding domain C2859_05360 PF03946 Ribosomal protein L11, N-terminal domain C2859_05365 PF00687 Ribosomal protein L1p/L10e family C2859_05370 PF00466 Ribosomal protein L10 C2859_05375 PF16320 Ribosomal protein L7/L12 dimerisation domain C2859_05375 PF00542 Ribosomal protein L7/L12 C-terminal domain C2859_05380 PF04563 RNA polymerase beta subunit C2859_05380 PF04561 RNA polymerase Rpb2, domain 2 C2859_05380 PF04565 RNA polymerase Rpb2, domain 3 C2859_05380 PF10385 RNA polymerase beta subunit external 1 domain C2859_05380 PF00562 RNA polymerase Rpb2, domain 6 C2859_05380 PF04560 RNA polymerase Rpb2, domain 7 C2859_05385 PF04997 RNA polymerase Rpb1, domain 1 C2859_05385 PF05000 RNA polymerase Rpb1, domain 4 C2859_05385 PF04998 RNA polymerase Rpb1, domain 5 C2859_05385 PF04983 RNA polymerase Rpb1, domain 3 C2859_05385 PF00623 RNA polymerase Rpb1, domain 2 C2859_05390 PF00164 Ribosomal protein S12/S23 C2859_05395 PF00177 Ribosomal protein S7p/S5e C2859_05400 PF03144 Elongation factor Tu domain 2 C2859_05400 PF00009 Elongation factor Tu GTP binding domain C2859_05400 PF03764 Elongation factor G, domain IV C2859_05400 PF00679 Elongation factor G C-terminus C2859_05400 PF14492 Elongation Factor G, domain II C2859_05405 PF03143 Elongation factor Tu C-terminal domain C2859_05405 PF03144 Elongation factor Tu domain 2 C2859_05405 PF00009 Elongation factor Tu GTP binding domain C2859_05410 PF00338 Ribosomal protein S10p/S20e C2859_05415 PF00297 Ribosomal protein L3 C2859_05420 PF00573 Ribosomal protein L4/L1 family C2859_05425 PF00276 Ribosomal protein L23 C2859_05430 PF03947 Ribosomal Proteins L2, C-terminal domain C2859_05430 PF00181 Ribosomal Proteins L2, RNA binding domain C2859_05435 PF00203 Ribosomal protein S19 C2859_05440 PF00237 Ribosomal protein L22p/L17e C2859_05445 PF00189 Ribosomal protein S3, C-terminal domain C2859_05445 PF07650 KH domain C2859_05450 PF00252 Ribosomal protein L16p/L10e C2859_05455 PF00831 Ribosomal L29 protein C2859_05460 PF00366 Ribosomal protein S17 C2859_05465 PF00238 Ribosomal protein L14p/L23e C2859_05470 PF00467 KOW motif C2859_05470 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 C2859_05475 PF00281 Ribosomal protein L5 C2859_05475 PF00673 ribosomal L5P family C-terminus C2859_05480 PF00253 Ribosomal protein S14p/S29e C2859_05485 PF00410 Ribosomal protein S8 C2859_05490 PF00347 Ribosomal protein L6 C2859_05495 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast C2859_05500 PF03719 Ribosomal protein S5, C-terminal domain C2859_05500 PF00333 Ribosomal protein S5, N-terminal domain C2859_05505 PF00327 Ribosomal protein L30p/L7e C2859_05510 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A C2859_05515 PF00344 SecY translocase C2859_05520 PF00416 Ribosomal protein S13/S18 C2859_05525 PF00411 Ribosomal protein S11 C2859_05530 PF01479 S4 domain C2859_05530 PF00163 Ribosomal protein S4/S9 N-terminal domain C2859_05535 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain C2859_05535 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain C2859_05535 PF01000 RNA polymerase Rpb3/RpoA insert domain C2859_05540 PF01196 Ribosomal protein L17 C2859_05545 PF02600 Disulfide bond formation protein DsbB C2859_05565 PF01474 Class-II DAHP synthetase family C2859_05575 PF01425 Amidase C2859_05590 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C2859_05595 PF00056 lactate/malate dehydrogenase, NAD binding domain C2859_05595 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C2859_05600 PF00043 Glutathione S-transferase, C-terminal domain C2859_05600 PF02798 Glutathione S-transferase, N-terminal domain C2859_05620 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C2859_05620 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2859_05625 PF08240 Alcohol dehydrogenase GroES-like domain C2859_05625 PF00107 Zinc-binding dehydrogenase C2859_05635 PF00691 OmpA family C2859_05635 PF05736 OprF membrane domain C2859_05645 PF00849 RNA pseudouridylate synthase C2859_05655 PF00155 Aminotransferase class I and II C2859_05665 PF00528 Binding-protein-dependent transport system inner membrane component C2859_05670 PF00528 Binding-protein-dependent transport system inner membrane component C2859_05675 PF00005 ABC transporter C2859_05675 PF17850 CysA C-terminal regulatory domain C2859_05675 PF12857 TOBE-like domain C2859_05685 PF00107 Zinc-binding dehydrogenase C2859_05685 PF08240 Alcohol dehydrogenase GroES-like domain C2859_05700 PF05506 Domain of unknown function (DUF756) C2859_05700 PF04185 Phosphoesterase family C2859_05710 PF00300 Histidine phosphatase superfamily (branch 1) C2859_05715 PF02875 Mur ligase family, glutamate ligase domain C2859_05715 PF08245 Mur ligase middle domain C2859_05730 PF00156 Phosphoribosyl transferase domain C2859_05735 PF04305 Protein of unknown function (DUF455) C2859_05755 PF00149 Calcineurin-like phosphoesterase C2859_05760 PF01569 PAP2 superfamily C2859_05765 PF13439 Glycosyltransferase Family 4 C2859_05765 PF00534 Glycosyl transferases group 1 C2859_05770 PF02541 Ppx/GppA phosphatase family C2859_05775 PF17941 Polyphosphate kinase C-terminal domain 1 C2859_05775 PF13089 Polyphosphate kinase N-terminal domain C2859_05775 PF13090 Polyphosphate kinase C-terminal domain 2 C2859_05775 PF02503 Polyphosphate kinase middle domain C2859_05780 PF00989 PAS fold C2859_05780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_05780 PF00512 His Kinase A (phospho-acceptor) domain C2859_05780 PF11808 Phosphate regulon sensor protein PhoR C2859_05785 PF00486 Transcriptional regulatory protein, C terminal C2859_05785 PF00072 Response regulator receiver domain C2859_05790 PF01435 Peptidase family M48 C2859_05790 PF13181 Tetratricopeptide repeat C2859_05795 PF00462 Glutaredoxin C2859_05805 PF00180 Isocitrate/isopropylmalate dehydrogenase C2859_06070 PF01555 DNA methylase C2859_06120 PF05698 Bacterial trigger factor protein (TF) C-terminus C2859_06120 PF05697 Bacterial trigger factor protein (TF) C2859_06125 PF00574 Clp protease C2859_06130 PF07724 AAA domain (Cdc48 subfamily) C2859_06130 PF10431 C-terminal, D2-small domain, of ClpB protein C2859_06130 PF06689 ClpX C4-type zinc finger C2859_06135 PF05362 Lon protease (S16) C-terminal proteolytic domain C2859_06135 PF02190 ATP-dependent protease La (LON) substrate-binding domain C2859_06135 PF00004 ATPase family associated with various cellular activities (AAA) C2859_06140 PF00216 Bacterial DNA-binding protein C2859_06165 PF05257 CHAP domain C2859_06165 PF01476 LysM domain C2859_06170 PF00753 Metallo-beta-lactamase superfamily C2859_06170 PF16123 Hydroxyacylglutathione hydrolase C-terminus C2859_06180 PF00075 RNase H C2859_06185 PF00929 Exonuclease C2859_06205 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C2859_06215 PF12706 Beta-lactamase superfamily domain C2859_06215 PF00753 Metallo-beta-lactamase superfamily C2859_06220 PF04055 Radical SAM superfamily C2859_06220 PF06463 Molybdenum Cofactor Synthesis C C2859_06230 PF01967 MoaC family C2859_06235 PF02597 ThiS family C2859_06240 PF02391 MoaE protein C2859_06255 PF12170 DNA polymerase III tau subunit V interacting with alpha C2859_06255 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding C2859_06255 PF12169 DNA polymerase III subunits gamma and tau domain III C2859_06260 PF02575 YbaB/EbfC DNA-binding family C2859_06265 PF02132 RecR protein C2859_06265 PF13662 Toprim domain C2859_06270 PF01230 HIT domain C2859_06280 PF13559 Domain of unknown function (DUF4129) C2859_06280 PF11992 Domain of unknown function (DUF3488) C2859_06280 PF01841 Transglutaminase-like superfamily C2859_06290 PF07726 ATPase family associated with various cellular activities (AAA) C2859_06290 PF17863 AAA lid domain C2859_06310 PF02545 Maf-like protein C2859_06315 PF02620 Large ribosomal RNA subunit accumulation protein YceD C2859_06320 PF01783 Ribosomal L32p protein family C2859_06325 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C2859_06325 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C2859_06335 PF00698 Acyl transferase domain C2859_06345 PF00550 Phosphopantetheine attachment site C2859_06350 PF00109 Beta-ketoacyl synthase, N-terminal domain C2859_06350 PF02801 Beta-ketoacyl synthase, C-terminal domain C2859_06355 PF04715 Anthranilate synthase component I, N terminal region C2859_06355 PF00425 chorismate binding enzyme C2859_06360 PF02618 YceG-like family C2859_06365 PF09115 DNA polymerase III, delta subunit, C terminal C2859_06405 PF06506 Propionate catabolism activator C2859_06405 PF00158 Sigma-54 interaction domain C2859_06405 PF02954 Bacterial regulatory protein, Fis family C2859_06415 PF00285 Citrate synthase, C-terminal domain C2859_06420 PF00330 Aconitase family (aconitate hydratase) C2859_06420 PF00694 Aconitase C-terminal domain C2859_06425 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH C2859_06440 PF04303 PrpF protein C2859_06445 PF00593 TonB dependent receptor C2859_06445 PF07715 TonB-dependent Receptor Plug Domain C2859_06460 PF00207 Alpha-2-macroglobulin family C2859_06460 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain C2859_06460 PF17962 Bacterial macroglobulin domain 6 C2859_06460 PF11974 Bacterial alpha-2-macroglobulin MG3 domain C2859_06460 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain C2859_06460 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain C2859_06460 PF01835 MG2 domain C2859_06460 PF07703 Alpha-2-macroglobulin bait region domain C2859_06480 PF06832 Penicillin-Binding Protein C-terminus Family C2859_06480 PF00905 Penicillin binding protein transpeptidase domain C2859_06480 PF00912 Transglycosylase C2859_06490 PF08534 Redoxin C2859_06500 PF00226 DnaJ domain C2859_06500 PF01556 DnaJ C terminal domain C2859_06505 PF00072 Response regulator receiver domain C2859_06510 PF01145 SPFH domain / Band 7 family C2859_06510 PF12221 Bacterial membrane protein N terminal C2859_06515 PF01145 SPFH domain / Band 7 family C2859_06525 PF00709 Adenylosuccinate synthetase C2859_06530 PF11838 ERAP1-like C-terminal domain C2859_06530 PF01433 Peptidase family M1 domain C2859_06540 PF00440 Bacterial regulatory proteins, tetR family C2859_06550 PF08463 EcoEI R protein C-terminal C2859_06550 PF04851 Type III restriction enzyme, res subunit C2859_06550 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) C2859_06550 PF00271 Helicase conserved C-terminal domain C2859_06565 PF12161 HsdM N-terminal domain C2859_06565 PF02384 N-6 DNA Methylase C2859_06570 PF01420 Type I restriction modification DNA specificity domain C2859_06600 PF13456 Reverse transcriptase-like C2859_06600 PF00300 Histidine phosphatase superfamily (branch 1) C2859_06605 PF01256 Carbohydrate kinase C2859_06615 PF00723 Glycosyl hydrolases family 15 C2859_06625 PF17678 Glycosyl hydrolase family 92 N-terminal domain C2859_06625 PF07971 Glycosyl hydrolase family 92 C2859_06630 PF00106 short chain dehydrogenase C2859_06645 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2859_06665 PF17755 UvrA DNA-binding domain C2859_06670 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C2859_06670 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C2859_06675 PF03450 CO dehydrogenase flavoprotein C-terminal domain C2859_06675 PF00941 FAD binding domain in molybdopterin dehydrogenase C2859_06680 PF00111 2Fe-2S iron-sulfur cluster binding domain C2859_06680 PF01799 [2Fe-2S] binding domain C2859_06715 PF01726 LexA DNA binding domain C2859_06715 PF00717 Peptidase S24-like C2859_06730 PF02811 PHP domain C2859_06730 PF14579 Helix-hairpin-helix motif C2859_06730 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C2859_06730 PF07733 Bacterial DNA polymerase III alpha NTPase domain C2859_06750 PF03169 OPT oligopeptide transporter protein C2859_06765 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region C2859_06765 PF07676 WD40-like Beta Propeller Repeat C2859_06765 PF00326 Prolyl oligopeptidase family C2859_06785 PF12833 Helix-turn-helix domain C2859_06785 PF02311 AraC-like ligand binding domain C2859_06805 PF06628 Catalase-related immune-responsive C2859_06805 PF00199 Catalase C2859_06805 PF18011 C-terminal domain found in long catalases C2859_06810 PF00248 Aldo/keto reductase family C2859_06815 PF00135 Carboxylesterase family C2859_06820 PF02347 Glycine cleavage system P-protein C2859_06825 PF07690 Major Facilitator Superfamily C2859_06840 PF08019 Phosphoethanolamine transferase EptA/EptB C2859_06840 PF00884 Sulfatase C2859_06855 PF00486 Transcriptional regulatory protein, C terminal C2859_06855 PF00072 Response regulator receiver domain C2859_06860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_06860 PF00512 His Kinase A (phospho-acceptor) domain C2859_06860 PF08521 Two-component sensor kinase N-terminal C2859_06870 PF03776 Septum formation topological specificity factor MinE C2859_06875 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C2859_06880 PF03775 Septum formation inhibitor MinC, C-terminal domain C2859_06880 PF05209 Septum formation inhibitor MinC, N-terminal domain C2859_06895 PF07730 Histidine kinase C2859_06900 PF00072 Response regulator receiver domain C2859_06900 PF00196 Bacterial regulatory proteins, luxR family C2859_06915 PF00730 HhH-GPD superfamily base excision DNA repair protein C2859_06950 PF02222 ATP-grasp domain C2859_06960 PF04377 Arginine-tRNA-protein transferase, C terminus C2859_06960 PF04376 Arginine-tRNA-protein transferase, N terminus C2859_06985 PF00378 Enoyl-CoA hydratase/isomerase C2859_07000 PF00005 ABC transporter C2859_07000 PF17760 UvrA interaction domain C2859_07000 PF17755 UvrA DNA-binding domain C2859_07005 PF00829 Ribosomal prokaryotic L21 protein C2859_07010 PF01016 Ribosomal L27 protein C2859_07015 PF01926 50S ribosome-binding GTPase C2859_07015 PF01018 GTP1/OBG C2859_07020 PF01649 Ribosomal protein S20 C2859_07025 PF03023 Lipid II flippase MurJ C2859_07030 PF06574 FAD synthetase C2859_07030 PF01687 Riboflavin kinase C2859_07035 PF06827 Zinc finger found in FPG and IleRS C2859_07035 PF00133 tRNA synthetases class I (I, L, M and V) C2859_07035 PF08264 Anticodon-binding domain of tRNA C2859_07040 PF01252 Signal peptidase (SPase) II C2859_07045 PF02401 LytB protein C2859_07055 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C2859_07055 PF06481 COX Aromatic Rich Motif C2859_07060 PF00115 Cytochrome C and Quinol oxidase polypeptide I C2859_07065 PF00510 Cytochrome c oxidase subunit III C2859_07070 PF03626 Prokaryotic Cytochrome C oxidase subunit IV C2859_07085 PF18073 Rubredoxin metal binding domain C2859_07090 PF05656 Protein of unknown function (DUF805) C2859_07100 PF12833 Helix-turn-helix domain C2859_07105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_07105 PF00183 Hsp90 protein C2859_07120 PF08678 Rsbr N terminal C2859_07120 PF01740 STAS domain C2859_07125 PF01740 STAS domain C2859_07130 PF13581 Histidine kinase-like ATPase domain C2859_07140 PF00072 Response regulator receiver domain C2859_07140 PF00672 HAMP domain C2859_07140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_07140 PF00512 His Kinase A (phospho-acceptor) domain C2859_07140 PF01627 Hpt domain C2859_07140 PF17149 Periplasmic sensor domain found in signal transduction proteins C2859_07145 PF00512 His Kinase A (phospho-acceptor) domain C2859_07145 PF00072 Response regulator receiver domain C2859_07145 PF08448 PAS fold C2859_07145 PF13188 PAS domain C2859_07145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_07150 PF04616 Glycosyl hydrolases family 43 C2859_07150 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain C2859_07155 PF07715 TonB-dependent Receptor Plug Domain C2859_07155 PF00593 TonB dependent receptor C2859_07160 PF00085 Thioredoxin C2859_07165 PF07237 Protein of unknown function (DUF1428) C2859_07170 PF00512 His Kinase A (phospho-acceptor) domain C2859_07170 PF02702 Osmosensitive K+ channel His kinase sensor domain C2859_07170 PF13492 GAF domain C2859_07170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_07170 PF13493 Domain of unknown function (DUF4118) C2859_07175 PF01339 CheB methylesterase C2859_07180 PF01739 CheR methyltransferase, SAM binding domain C2859_07180 PF03705 CheR methyltransferase, all-alpha domain C2859_07185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_07185 PF00512 His Kinase A (phospho-acceptor) domain C2859_07185 PF00072 Response regulator receiver domain C2859_07185 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C2859_07185 PF00672 HAMP domain C2859_07185 PF01627 Hpt domain C2859_07190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_07190 PF13426 PAS domain C2859_07190 PF00072 Response regulator receiver domain C2859_07195 PF00072 Response regulator receiver domain C2859_07205 PF06964 Alpha-L-arabinofuranosidase C-terminal domain C2859_07210 PF01263 Aldose 1-epimerase C2859_07215 PF01578 Cytochrome C assembly protein C2859_07220 PF02978 Signal peptide binding domain C2859_07220 PF02881 SRP54-type protein, helical bundle domain C2859_07220 PF00448 SRP54-type protein, GTPase domain C2859_07225 PF03060 Nitronate monooxygenase C2859_07230 PF01063 Amino-transferase class IV C2859_07235 PF00886 Ribosomal protein S16 C2859_07240 PF05239 PRC-barrel domain C2859_07240 PF01782 RimM N-terminal domain C2859_07245 PF01746 tRNA (Guanine-1)-methyltransferase C2859_07250 PF01245 Ribosomal protein L19 C2859_07255 PF01554 MatE C2859_07270 PF01479 S4 domain C2859_07275 PF00141 Peroxidase C2859_07285 PF05190 MutS family domain IV C2859_07285 PF01624 MutS domain I C2859_07285 PF00488 MutS domain V C2859_07285 PF05188 MutS domain II C2859_07285 PF05192 MutS domain III C2859_07330 PF00703 Glycosyl hydrolases family 2 C2859_07330 PF02837 Glycosyl hydrolases family 2, sugar binding domain C2859_07330 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 C2859_07330 PF16355 Domain of unknown function (DUF4982) C2859_07330 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C2859_07335 PF07745 Glycosyl hydrolase family 53 C2859_07345 PF01381 Helix-turn-helix C2859_07345 PF06114 IrrE N-terminal-like domain C2859_07345 PF09856 Predicted transcriptional regulator (DUF2083) C2859_07350 PF00171 Aldehyde dehydrogenase family C2859_07355 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C2859_07355 PF02770 Acyl-CoA dehydrogenase, middle domain C2859_07355 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C2859_07360 PF00378 Enoyl-CoA hydratase/isomerase C2859_07365 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C2859_07365 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C2859_07365 PF00378 Enoyl-CoA hydratase/isomerase C2859_07370 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C2859_07370 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C2859_07375 PF01545 Cation efflux family C2859_07380 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C2859_07380 PF00378 Enoyl-CoA hydratase/isomerase C2859_07380 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C2859_07385 PF04542 Sigma-70 region 2 C2859_07385 PF08281 Sigma-70, region 4 C2859_07395 PF13180 PDZ domain C2859_07400 PF00679 Elongation factor G C-terminus C2859_07400 PF00009 Elongation factor Tu GTP binding domain C2859_07400 PF03144 Elongation factor Tu domain 2 C2859_07400 PF06421 GTP-binding protein LepA C-terminus C2859_07405 PF10502 Signal peptidase, peptidase S26 C2859_07415 PF14622 Ribonuclease-III-like C2859_07415 PF00035 Double-stranded RNA binding motif C2859_07420 PF07650 KH domain C2859_07420 PF01926 50S ribosome-binding GTPase C2859_07425 PF02565 Recombination protein O C terminal C2859_07425 PF11967 Recombination protein O N terminal C2859_07435 PF05958 tRNA (Uracil-5-)-methyltransferase C2859_07445 PF01323 DSBA-like thioredoxin domain C2859_07450 PF01593 Flavin containing amine oxidoreductase C2859_07455 PF04244 Deoxyribodipyrimidine photo-lyase-related protein C2859_07460 PF00933 Glycosyl hydrolase family 3 N terminal domain C2859_07470 PF01048 Phosphorylase superfamily C2859_07475 PF00313 'Cold-shock' DNA-binding domain C2859_07495 PF00271 Helicase conserved C-terminal domain C2859_07495 PF08494 DEAD/H associated C2859_07495 PF00270 DEAD/DEAH box helicase C2859_07500 PF04675 DNA ligase N terminus C2859_07500 PF01068 ATP dependent DNA ligase domain C2859_07500 PF04679 ATP dependent DNA ligase C terminal region C2859_07510 PF04679 ATP dependent DNA ligase C terminal region C2859_07510 PF01068 ATP dependent DNA ligase domain C2859_07510 PF04675 DNA ligase N terminus C2859_07525 PF00072 Response regulator receiver domain C2859_07525 PF00990 Diguanylate cyclase, GGDEF domain C2859_07540 PF00108 Thiolase, N-terminal domain C2859_07540 PF02803 Thiolase, C-terminal domain C2859_07545 PF00082 Subtilase family C2859_07545 PF12951 Passenger-associated-transport-repeat C2859_07545 PF03797 Autotransporter beta-domain C2859_07550 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C2859_07550 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C2859_07565 PF01863 Protein of unknown function DUF45 C2859_07570 PF07043 Protein of unknown function (DUF1328) C2859_07580 PF01258 Prokaryotic dksA/traR C4-type zinc finger C2859_07600 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C2859_07610 PF03831 PhnA domain C2859_07610 PF08274 PhnA Zinc-Ribbon C2859_07620 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C2859_07625 PF07690 Major Facilitator Superfamily C2859_07660 PF03706 Lysylphosphatidylglycerol synthase TM region C2859_07660 PF09924 Uncharacterised conserved protein (DUF2156) C2859_07670 PF01042 Endoribonuclease L-PSP C2859_07715 PF04542 Sigma-70 region 2 C2859_07715 PF04545 Sigma-70, region 4 C2859_07735 PF04060 Putative Fe-S cluster C2859_07745 PF09334 tRNA synthetases class I (M) C2859_07745 PF01588 Putative tRNA binding domain C2859_07760 PF00005 ABC transporter C2859_07760 PF13732 Domain of unknown function (DUF4162) C2859_07765 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C2859_07770 PF00324 Amino acid permease C2859_07775 PF02574 Homocysteine S-methyltransferase C2859_07785 PF02592 Putative vitamin uptake transporter C2859_07805 PF03551 Transcriptional regulator PadR-like family C2859_07840 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit C2859_07845 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C2859_07845 PF14579 Helix-hairpin-helix motif C2859_07845 PF02811 PHP domain C2859_07845 PF07733 Bacterial DNA polymerase III alpha NTPase domain C2859_07845 PF01336 OB-fold nucleic acid binding domain C2859_07850 PF01351 Ribonuclease HII C2859_07855 PF02684 Lipid-A-disaccharide synthetase C2859_07860 PF00132 Bacterial transferase hexapeptide (six repeats) C2859_07860 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 C2859_07865 PF07977 FabA-like domain C2859_07870 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD C2859_07870 PF00132 Bacterial transferase hexapeptide (six repeats) C2859_07880 PF01103 Surface antigen C2859_07880 PF07244 Surface antigen variable number repeat C2859_07885 PF17820 PDZ domain C2859_07885 PF02163 Peptidase family M50 C2859_07890 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain C2859_07890 PF13288 DXP reductoisomerase C-terminal domain C2859_07890 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase C2859_07900 PF01255 Putative undecaprenyl diphosphate synthase C2859_07905 PF01765 Ribosome recycling factor C2859_07910 PF00696 Amino acid kinase family C2859_07915 PF00990 Diguanylate cyclase, GGDEF domain C2859_07915 PF00072 Response regulator receiver domain C2859_07920 PF00889 Elongation factor TS C2859_07925 PF00318 Ribosomal protein S2 C2859_07960 PF00557 Metallopeptidase family M24 C2859_07965 PF08335 GlnD PII-uridylyltransferase C2859_07965 PF01909 Nucleotidyltransferase domain C2859_07965 PF01966 HD domain C2859_07970 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal C2859_07970 PF14602 Hexapeptide repeat of succinyl-transferase C2859_07970 PF00132 Bacterial transferase hexapeptide (six repeats) C2859_07975 PF03960 ArsC family C2859_07980 PF01546 Peptidase family M20/M25/M40 C2859_07980 PF07687 Peptidase dimerisation domain C2859_07985 PF00733 Asparagine synthase C2859_07985 PF13537 Glutamine amidotransferase domain C2859_07995 PF07715 TonB-dependent Receptor Plug Domain C2859_07995 PF00593 TonB dependent receptor C2859_08000 PF01804 Penicillin amidase C2859_08005 PF00210 Ferritin-like domain C2859_08010 PF05724 Thiopurine S-methyltransferase (TPMT) C2859_08025 PF00521 DNA gyrase/topoisomerase IV, subunit A C2859_08025 PF03989 DNA gyrase C-terminal domain, beta-propeller C2859_08040 PF02321 Outer membrane efflux protein C2859_08045 PF00529 HlyD membrane-fusion protein of T1SS C2859_08045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2859_08050 PF07690 Major Facilitator Superfamily C2859_08060 PF00933 Glycosyl hydrolase family 3 N terminal domain C2859_08060 PF14310 Fibronectin type III-like domain C2859_08060 PF01915 Glycosyl hydrolase family 3 C-terminal domain C2859_08070 PF00854 POT family C2859_08095 PF12802 MarR family C2859_08100 PF01432 Peptidase family M3 C2859_08110 PF00255 Glutathione peroxidase C2859_08115 PF00175 Oxidoreductase NAD-binding domain C2859_08115 PF00970 Oxidoreductase FAD-binding domain C2859_08120 PF00005 ABC transporter C2859_08125 PF05683 Fumarase C-terminus C2859_08125 PF05681 Fumarate hydratase (Fumerase) C2859_08135 PF00484 Carbonic anhydrase C2859_08140 PF02253 Phospholipase A1 C2859_08150 PF00313 'Cold-shock' DNA-binding domain C2859_08165 PF00899 ThiF family C2859_08170 PF01026 TatD related DNase C2859_08185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C2859_08185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C2859_08185 PF02770 Acyl-CoA dehydrogenase, middle domain C2859_08195 PF02798 Glutathione S-transferase, N-terminal domain C2859_08195 PF00043 Glutathione S-transferase, C-terminal domain C2859_08205 PF13537 Glutamine amidotransferase domain C2859_08205 PF00733 Asparagine synthase C2859_08210 PF03358 NADPH-dependent FMN reductase C2859_08215 PF03796 DnaB-like helicase C terminal domain C2859_08215 PF00772 DnaB-like helicase N terminal domain C2859_08220 PF03441 FAD binding domain of DNA photolyase C2859_08220 PF00875 DNA photolyase C2859_08230 PF05736 OprF membrane domain C2859_08230 PF00691 OmpA family C2859_08240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2859_08240 PF03466 LysR substrate binding domain C2859_08255 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2859_08260 PF00873 AcrB/AcrD/AcrF family C2859_08265 PF00106 short chain dehydrogenase C2859_08270 PF02321 Outer membrane efflux protein C2859_08275 PF08448 PAS fold C2859_08275 PF00990 Diguanylate cyclase, GGDEF domain C2859_08285 PF00990 Diguanylate cyclase, GGDEF domain C2859_08315 PF00082 Subtilase family C2859_08320 PF01668 SmpB protein C2859_08325 PF03364 Polyketide cyclase / dehydrase and lipid transport C2859_08330 PF03658 RnfH family Ubiquitin C2859_08335 PF04355 SmpA / OmlA family C2859_08340 PF01475 Ferric uptake regulator family C2859_08345 PF02463 RecF/RecN/SMC N terminal domain C2859_08350 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding C2859_08350 PF01628 HrcA protein C terminal domain C2859_08355 PF01025 GrpE C2859_08360 PF00012 Hsp70 protein C2859_08365 PF01556 DnaJ C terminal domain C2859_08365 PF00684 DnaJ central domain C2859_08365 PF00226 DnaJ domain C2859_08375 PF08543 Phosphomethylpyrimidine kinase C2859_08400 PF03412 Peptidase C39 family C2859_08400 PF00005 ABC transporter C2859_08400 PF00664 ABC transporter transmembrane region C2859_08405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2859_08405 PF03466 LysR substrate binding domain C2859_08410 PF00005 ABC transporter C2859_08410 PF00664 ABC transporter transmembrane region C2859_08415 PF01205 Uncharacterized protein family UPF0029 C2859_08420 PF03641 Possible lysine decarboxylase C2859_08425 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2859_08425 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C2859_08430 PF02817 e3 binding domain C2859_08430 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C2859_08430 PF00364 Biotin-requiring enzyme C2859_08435 PF16078 2-oxoglutarate dehydrogenase N-terminus C2859_08435 PF16870 2-oxoglutarate dehydrogenase C-terminal C2859_08435 PF02779 Transketolase, pyrimidine binding domain C2859_08435 PF00676 Dehydrogenase E1 component C2859_08445 PF08007 Cupin superfamily protein C2859_08455 PF00206 Lyase C2859_08455 PF08328 Adenylosuccinate lyase C-terminal C2859_08465 PF01595 Cyclin M transmembrane N-terminal domain C2859_08465 PF03471 Transporter associated domain C2859_08465 PF00571 CBS domain C2859_08470 PF10415 Fumarase C C-terminus C2859_08470 PF00206 Lyase C2859_08495 PF00005 ABC transporter C2859_08500 PF00392 Bacterial regulatory proteins, gntR family C2859_08510 PF00255 Glutathione peroxidase C2859_08515 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C2859_08515 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C2859_08520 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C2859_08520 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C2859_08520 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C2859_08525 PF04102 SlyX C2859_08540 PF00356 Bacterial regulatory proteins, lacI family C2859_08545 PF07690 Major Facilitator Superfamily C2859_08550 PF00294 pfkB family carbohydrate kinase C2859_08560 PF02965 Vitamin B12 dependent methionine synthase, activation domain C2859_08560 PF02607 B12 binding domain C2859_08560 PF00809 Pterin binding enzyme C2859_08560 PF02574 Homocysteine S-methyltransferase C2859_08560 PF02310 B12 binding domain C2859_08565 PF00809 Pterin binding enzyme C2859_08565 PF02574 Homocysteine S-methyltransferase C2859_08570 PF01209 ubiE/COQ5 methyltransferase family C2859_08575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C2859_08575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C2859_08575 PF02770 Acyl-CoA dehydrogenase, middle domain C2859_08580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C2859_08580 PF02770 Acyl-CoA dehydrogenase, middle domain C2859_08580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C2859_08585 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C2859_08585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C2859_08585 PF02770 Acyl-CoA dehydrogenase, middle domain C2859_08590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C2859_08590 PF02770 Acyl-CoA dehydrogenase, middle domain C2859_08590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C2859_08595 PF02770 Acyl-CoA dehydrogenase, middle domain C2859_08595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C2859_08595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C2859_08615 PF00773 RNB domain C2859_08615 PF00575 S1 RNA binding domain C2859_08615 PF08206 Ribonuclease B OB domain C2859_08615 PF08461 Ribonuclease R winged-helix domain C2859_08615 PF17876 Cold shock domain C2859_08625 PF08032 RNA 2'-O ribose methyltransferase substrate binding C2859_08625 PF00588 SpoU rRNA Methylase family C2859_08630 PF07694 5TMR of 5TMR-LYT C2859_08630 PF00990 Diguanylate cyclase, GGDEF domain C2859_08635 PF00929 Exonuclease C2859_08645 PF01895 PhoU domain C2859_08650 PF00005 ABC transporter C2859_08655 PF00528 Binding-protein-dependent transport system inner membrane component C2859_08660 PF00528 Binding-protein-dependent transport system inner membrane component C2859_08665 PF12849 PBP superfamily domain C2859_08670 PF12849 PBP superfamily domain C2859_08685 PF00484 Carbonic anhydrase C2859_08690 PF00916 Sulfate permease family C2859_08690 PF01740 STAS domain C2859_08695 PF00730 HhH-GPD superfamily base excision DNA repair protein C2859_08695 PF00633 Helix-hairpin-helix motif C2859_08695 PF10576 Iron-sulfur binding domain of endonuclease III C2859_08705 PF00378 Enoyl-CoA hydratase/isomerase C2859_08710 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C2859_08710 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C2859_08715 PF00293 NUDIX domain C2859_08720 PF00581 Rhodanese-like domain C2859_08760 PF10672 S-adenosylmethionine-dependent methyltransferase C2859_08760 PF01170 Putative RNA methylase family UPF0020 C2859_08760 PF02926 THUMP domain C2859_08765 PF01513 ATP-NAD kinase C2859_08790 PF00929 Exonuclease C2859_08790 PF08411 Exonuclease C-terminal C2859_08800 PF01494 FAD binding domain C2859_08805 PF00266 Aminotransferase class-V C2859_08815 PF06052 3-hydroxyanthranilic acid dioxygenase C2859_08820 PF00484 Carbonic anhydrase C2859_08865 PF00196 Bacterial regulatory proteins, luxR family C2859_08865 PF00072 Response regulator receiver domain C2859_08885 PF04299 Putative FMN-binding domain C2859_08905 PF00152 tRNA synthetases class II (D, K and N) C2859_08905 PF01336 OB-fold nucleic acid binding domain C2859_08915 PF01521 Iron-sulphur cluster biosynthesis C2859_08920 PF01250 Ribosomal protein S6 C2859_08925 PF01084 Ribosomal protein S18 C2859_08930 PF03948 Ribosomal protein L9, C-terminal domain C2859_08930 PF01281 Ribosomal protein L9, N-terminal domain C2859_08935 PF02463 RecF/RecN/SMC N terminal domain C2859_08940 PF04354 ZipA, C-terminal FtsZ-binding domain C2859_08950 PF00155 Aminotransferase class I and II C2859_08955 PF00533 BRCA1 C Terminus (BRCT) domain C2859_08955 PF12826 Helix-hairpin-helix motif C2859_08955 PF03119 NAD-dependent DNA ligase C4 zinc finger domain C2859_08955 PF03120 NAD-dependent DNA ligase OB-fold domain C2859_08955 PF01653 NAD-dependent DNA ligase adenylation domain C2859_08960 PF00152 tRNA synthetases class II (D, K and N) C2859_08975 PF01008 Initiation factor 2 subunit family C2859_08980 PF03989 DNA gyrase C-terminal domain, beta-propeller C2859_08980 PF00521 DNA gyrase/topoisomerase IV, subunit A C2859_08985 PF13360 PQQ-like domain C2859_09000 PF01175 Urocanase Rossmann-like domain C2859_09000 PF17392 Urocanase C-terminal domain C2859_09000 PF17391 Urocanase N-terminal domain C2859_09010 PF00221 Aromatic amino acid lyase C2859_09015 PF07969 Amidohydrolase family C2859_09030 PF07702 UTRA domain C2859_09030 PF00392 Bacterial regulatory proteins, gntR family C2859_09060 PF01794 Ferric reductase like transmembrane component C2859_09065 PF00174 Oxidoreductase molybdopterin binding domain C2859_09070 PF00266 Aminotransferase class-V C2859_09075 PF01842 ACT domain C2859_09075 PF01817 Chorismate mutase type II C2859_09075 PF00800 Prephenate dehydratase C2859_09080 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C2859_09090 PF03544 Gram-negative bacterial TonB protein C-terminal C2859_09095 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C2859_09095 PF02403 Seryl-tRNA synthetase N-terminal domain C2859_09100 PF02525 Flavodoxin-like fold C2859_09105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2859_09105 PF03466 LysR substrate binding domain C2859_09120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2859_09120 PF02203 Tar ligand binding domain homologue C2859_09120 PF00672 HAMP domain C2859_09140 PF00072 Response regulator receiver domain C2859_09140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_09140 PF00512 His Kinase A (phospho-acceptor) domain C2859_09140 PF13188 PAS domain C2859_09140 PF08448 PAS fold C2859_09145 PF00072 Response regulator receiver domain C2859_09145 PF01627 Hpt domain C2859_09145 PF00512 His Kinase A (phospho-acceptor) domain C2859_09145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_09145 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C2859_09145 PF00672 HAMP domain C2859_09155 PF06745 KaiC C2859_09160 PF00072 Response regulator receiver domain C2859_09160 PF13426 PAS domain C2859_09160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_09170 PF03918 Cytochrome C biogenesis protein C2859_09175 PF08534 Redoxin C2859_09180 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal C2859_09180 PF01578 Cytochrome C assembly protein C2859_09185 PF03100 CcmE C2859_09195 PF01578 Cytochrome C assembly protein C2859_09200 PF00082 Subtilase family C2859_09210 PF08281 Sigma-70, region 4 C2859_09210 PF04542 Sigma-70 region 2 C2859_09225 PF00034 Cytochrome c C2859_09240 PF05523 WxcM-like, C-terminal C2859_09260 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C2859_09265 PF01943 Polysaccharide biosynthesis protein C2859_09270 PF00535 Glycosyl transferase family 2 C2859_09285 PF08241 Methyltransferase domain C2859_09320 PF00005 ABC transporter C2859_09325 PF00664 ABC transporter transmembrane region C2859_09325 PF00005 ABC transporter C2859_09330 PF07690 Major Facilitator Superfamily C2859_09335 PF00296 Luciferase-like monooxygenase C2859_09350 PF01595 Cyclin M transmembrane N-terminal domain C2859_09350 PF03471 Transporter associated domain C2859_09350 PF00571 CBS domain C2859_09365 PF01384 Phosphate transporter family C2859_09380 PF01751 Toprim domain C2859_09380 PF00204 DNA gyrase B C2859_09380 PF00986 DNA gyrase B subunit, carboxyl terminus C2859_09380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_09390 PF06418 CTP synthase N-terminus C2859_09390 PF00117 Glutamine amidotransferase class-I C2859_09395 PF00793 DAHP synthetase I family C2859_09405 PF00113 Enolase, C-terminal TIM barrel domain C2859_09405 PF03952 Enolase, N-terminal domain C2859_09410 PF04977 Septum formation initiator C2859_09415 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase C2859_09420 PF02542 YgbB family C2859_09425 PF01142 tRNA pseudouridine synthase D (TruD) C2859_09430 PF01713 Smr domain C2859_09435 PF01975 Survival protein SurE C2859_09445 PF09335 SNARE associated Golgi protein C2859_09450 PF01476 LysM domain C2859_09450 PF01551 Peptidase family M23 C2859_09460 PF04430 Protein of unknown function (DUF498/DUF598) C2859_09465 PF01985 CRS1 / YhbY (CRM) domain C2859_09470 PF01728 FtsJ-like methyltransferase C2859_09475 PF01434 Peptidase family M41 C2859_09475 PF00004 ATPase family associated with various cellular activities (AAA) C2859_09475 PF17862 AAA+ lid domain C2859_09475 PF06480 FtsH Extracellular C2859_09480 PF00809 Pterin binding enzyme C2859_09490 PF17209 Hfq protein C2859_09495 PF01926 50S ribosome-binding GTPase C2859_09495 PF13167 GTP-binding GTPase N-terminal C2859_09495 PF16360 GTP-binding GTPase Middle Region C2859_09500 PF02464 Competence-damaged protein C2859_09505 PF03109 ABC1 family C2859_09510 PF00717 Peptidase S24-like C2859_09510 PF01726 LexA DNA binding domain C2859_09515 PF00154 recA bacterial DNA recombination protein C2859_09525 PF02631 RecX family C2859_09530 PF01411 tRNA synthetases class II (A) C2859_09530 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C2859_09530 PF02272 DHHA1 domain C2859_09535 PF02599 Global regulator protein family C2859_09575 PF04381 Putative exonuclease, RdgC C2859_09605 PF00145 C-5 cytosine-specific DNA methylase C2859_09750 PF00182 Chitinase class I C2859_09830 PF06791 Prophage tail length tape measure protein C2859_09895 PF14659 Phage integrase, N-terminal SAM-like domain C2859_09895 PF13356 Arm DNA-binding domain C2859_09895 PF00589 Phage integrase family C2859_09905 PF08447 PAS fold C2859_09905 PF13426 PAS domain C2859_09905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2859_09910 PF17954 Quercetinase C-terminal cupin domain C2859_09910 PF02678 Pirin C2859_09915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2859_09915 PF03466 LysR substrate binding domain C2859_09940 PF08543 Phosphomethylpyrimidine kinase C2859_09955 PF13638 PIN domain C2859_09955 PF02562 PhoH-like protein C2859_09960 PF00578 AhpC/TSA family C2859_09975 PF00701 Dihydrodipicolinate synthetase family C2859_09985 PF11953 Domain of unknown function (DUF3470) C2859_09985 PF00037 4Fe-4S binding domain C2859_09990 PF05035 2-keto-3-deoxy-galactonokinase C2859_09995 PF08450 SMP-30/Gluconolactonase/LRE-like region C2859_10000 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C2859_10000 PF13378 Enolase C-terminal domain-like C2859_10005 PF01081 KDPG and KHG aldolase C2859_10015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2859_10015 PF03466 LysR substrate binding domain C2859_10030 PF00942 Cellulose binding domain C2859_10030 PF03442 Carbohydrate binding domain X2 C2859_10045 PF16338 Domain of unknown function (DUF4968) C2859_10045 PF01055 Glycosyl hydrolases family 31 C2859_10045 PF17137 Domain of unknown function (DUF5110) C2859_10055 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C2859_10055 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C2859_10065 PF00083 Sugar (and other) transporter C2859_10085 PF01520 N-acetylmuramoyl-L-alanine amidase C2859_10090 PF02649 Type I GTP cyclohydrolase folE2 C2859_10100 PF01743 Poly A polymerase head domain C2859_10100 PF12626 Polymerase A arginine-rich C-terminus C2859_10100 PF12627 Probable RNA and SrmB- binding site of polymerase A C2859_10105 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C2859_10110 PF02548 Ketopantoate hydroxymethyltransferase C2859_10115 PF02569 Pantoate-beta-alanine ligase C2859_10120 PF02261 Aspartate decarboxylase C2859_10125 PF00342 Phosphoglucose isomerase C2859_10150 PF01915 Glycosyl hydrolase family 3 C-terminal domain C2859_10150 PF14310 Fibronectin type III-like domain C2859_10150 PF00933 Glycosyl hydrolase family 3 N terminal domain C2859_10160 PF00474 Sodium:solute symporter family C2859_10165 PF00563 EAL domain C2859_10165 PF01590 GAF domain C2859_10165 PF00990 Diguanylate cyclase, GGDEF domain C2859_10165 PF00360 Phytochrome region C2859_10175 PF00150 Cellulase (glycosyl hydrolase family 5) C2859_10175 PF02013 Cellulose or protein binding domain C2859_10180 PF00072 Response regulator receiver domain C2859_10190 PF04551 GcpE protein C2859_10195 PF01569 PAP2 superfamily C2859_10205 PF07690 Major Facilitator Superfamily C2859_10210 PF01177 Asp/Glu/Hydantoin racemase C2859_10220 PF00892 EamA-like transporter family C2859_10225 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain C2859_10225 PF01565 FAD binding domain C2859_10230 PF01180 Dihydroorotate dehydrogenase C2859_10250 PF00171 Aldehyde dehydrogenase family C2859_10310 PF04002 RadC-like JAB domain C2859_10380 PF02481 DNA recombination-mediator protein A C2859_10380 PF17782 DprA winged helix domain C2859_10435 PF02534 Type IV secretory system Conjugative DNA transfer C2859_10460 PF03412 Peptidase C39 family C2859_10460 PF00005 ABC transporter C2859_10460 PF00664 ABC transporter transmembrane region C2859_10470 PF07690 Major Facilitator Superfamily C2859_10475 PF02794 RTX toxin acyltransferase family C2859_10585 PF00535 Glycosyl transferase family 2 C2859_10590 PF14883 Hypothetical glycosyl hydrolase family 13 C2859_10590 PF01522 Polysaccharide deacetylase C2859_10600 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB C2859_10600 PF08479 POTRA domain, ShlB-type C2859_10600 PF17287 POTRA domain C2859_10605 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain C2859_10605 PF05594 Haemagluttinin repeat C2859_10605 PF05860 haemagglutination activity domain C2859_10605 PF13332 Hemagglutinin repeat C2859_10605 PF13018 Extended Signal Peptide of Type V secretion system C2859_10660 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain C2859_10660 PF05860 haemagglutination activity domain C2859_10660 PF05594 Haemagluttinin repeat C2859_10660 PF13018 Extended Signal Peptide of Type V secretion system C2859_10660 PF13332 Hemagglutinin repeat C2859_10665 PF03073 TspO/MBR family C2859_10670 PF00696 Amino acid kinase family C2859_10670 PF01842 ACT domain C2859_10670 PF13840 ACT domain C2859_10670 PF03447 Homoserine dehydrogenase, NAD binding domain C2859_10670 PF00742 Homoserine dehydrogenase C2859_10675 PF08544 GHMP kinases C terminal C2859_10675 PF00288 GHMP kinases N terminal domain C2859_10685 PF14821 Threonine synthase N terminus C2859_10685 PF00291 Pyridoxal-phosphate dependent enzyme C2859_10695 PF13545 Crp-like helix-turn-helix domain C2859_10695 PF00027 Cyclic nucleotide-binding domain C2859_10700 PF13393 Histidyl-tRNA synthetase C2859_10700 PF03129 Anticodon binding domain C2859_10710 PF01634 ATP phosphoribosyltransferase C2859_10710 PF08029 HisG, C-terminal domain C2859_10715 PF00815 Histidinol dehydrogenase C2859_10720 PF00155 Aminotransferase class I and II C2859_10725 PF00475 Imidazoleglycerol-phosphate dehydratase C2859_10730 PF00117 Glutamine amidotransferase class-I C2859_10735 PF00977 Histidine biosynthesis protein C2859_10740 PF00977 Histidine biosynthesis protein C2859_10745 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase C2859_10745 PF01502 Phosphoribosyl-AMP cyclohydrolase C2859_10765 PF03079 ARD/ARD' family C2859_10770 PF00596 Class II Aldolase and Adducin N-terminal domain C2859_10775 PF13520 Amino acid permease C2859_10780 PF13520 Amino acid permease C2859_10790 PF01842 ACT domain C2859_10790 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C2859_10790 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C2859_10795 PF02913 FAD linked oxidases, C-terminal domain C2859_10795 PF01565 FAD binding domain C2859_10815 PF08207 Elongation factor P (EF-P) KOW-like domain C2859_10815 PF01132 Elongation factor P (EF-P) OB domain C2859_10815 PF09285 Elongation factor P, C-terminal C2859_10820 PF00106 short chain dehydrogenase C2859_10825 PF00682 HMGL-like C2859_10835 PF00378 Enoyl-CoA hydratase/isomerase C2859_10845 PF07664 Ferrous iron transport protein B C terminus C2859_10845 PF02421 Ferrous iron transport protein B C2859_10845 PF07670 Nucleoside recognition C2859_10860 PF00155 Aminotransferase class I and II C2859_10865 PF03473 MOSC domain C2859_10865 PF03475 3-alpha domain C2859_10870 PF05173 Dihydrodipicolinate reductase, C-terminus C2859_10870 PF01113 Dihydrodipicolinate reductase, N-terminus C2859_10875 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C2859_10875 PF00117 Glutamine amidotransferase class-I C2859_10885 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C2859_10885 PF02142 MGS-like domain C2859_10885 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C2859_10890 PF01272 Transcription elongation factor, GreA/GreB, C-term C2859_10890 PF03449 Transcription elongation factor, N-terminal C2859_10900 PF02272 DHHA1 domain C2859_10900 PF01368 DHH family C2859_10900 PF17768 RecJ OB domain C2859_10910 PF00072 Response regulator receiver domain C2859_10910 PF04397 LytTr DNA-binding domain C2859_10920 PF00152 tRNA synthetases class II (D, K and N) C2859_10920 PF01336 OB-fold nucleic acid binding domain C2859_10925 PF00072 Response regulator receiver domain C2859_10930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_10930 PF00512 His Kinase A (phospho-acceptor) domain C2859_10930 PF00072 Response regulator receiver domain C2859_10930 PF01627 Hpt domain C2859_10935 PF00512 His Kinase A (phospho-acceptor) domain C2859_10935 PF00072 Response regulator receiver domain C2859_10935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_10935 PF01627 Hpt domain C2859_10940 PF00378 Enoyl-CoA hydratase/isomerase C2859_10945 PF00501 AMP-binding enzyme C2859_10945 PF13193 AMP-binding enzyme C-terminal domain C2859_10955 PF00694 Aconitase C-terminal domain C2859_10955 PF00330 Aconitase family (aconitate hydratase) C2859_10970 PF06434 Aconitate hydratase 2 N-terminus C2859_10970 PF00330 Aconitase family (aconitate hydratase) C2859_10970 PF11791 Aconitate B N-terminal domain C2859_10975 PF00561 alpha/beta hydrolase fold C2859_10980 PF03707 Bacterial signalling protein N terminal repeat C2859_10980 PF00563 EAL domain C2859_10980 PF00990 Diguanylate cyclase, GGDEF domain C2859_10985 PF00072 Response regulator receiver domain C2859_10985 PF01339 CheB methylesterase C2859_10990 PF03975 CheD chemotactic sensory transduction C2859_10995 PF03705 CheR methyltransferase, all-alpha domain C2859_10995 PF01739 CheR methyltransferase, SAM binding domain C2859_11000 PF00672 HAMP domain C2859_11000 PF02203 Tar ligand binding domain homologue C2859_11000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2859_11010 PF01584 CheW-like domain C2859_11015 PF07317 Flagellar regulator YcgR C2859_11015 PF07238 PilZ domain C2859_11030 PF02203 Tar ligand binding domain homologue C2859_11030 PF00672 HAMP domain C2859_11030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2859_11035 PF00672 HAMP domain C2859_11035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2859_11035 PF02203 Tar ligand binding domain homologue C2859_11040 PF00672 HAMP domain C2859_11040 PF02203 Tar ligand binding domain homologue C2859_11040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2859_11045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2859_11045 PF00672 HAMP domain C2859_11045 PF02203 Tar ligand binding domain homologue C2859_11055 PF00672 HAMP domain C2859_11055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2859_11055 PF02203 Tar ligand binding domain homologue C2859_11060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2859_11060 PF00672 HAMP domain C2859_11060 PF02203 Tar ligand binding domain homologue C2859_11065 PF02203 Tar ligand binding domain homologue C2859_11065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2859_11065 PF00672 HAMP domain C2859_11070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2859_11070 PF02203 Tar ligand binding domain homologue C2859_11070 PF00672 HAMP domain C2859_11085 PF00672 HAMP domain C2859_11085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2859_11085 PF02203 Tar ligand binding domain homologue C2859_11090 PF17200 Single Cache domain 2 C2859_11090 PF00672 HAMP domain C2859_11090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2859_11100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2859_11100 PF00672 HAMP domain C2859_11105 PF01584 CheW-like domain C2859_11105 PF09078 CheY binding C2859_11105 PF02895 Signal transducing histidine kinase, homodimeric domain C2859_11105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_11105 PF01627 Hpt domain C2859_11110 PF00072 Response regulator receiver domain C2859_11120 PF01584 CheW-like domain C2859_11125 PF13614 AAA domain C2859_11130 PF00691 OmpA family C2859_11130 PF13677 Membrane MotB of proton-channel complex MotA/MotB C2859_11135 PF01618 MotA/TolQ/ExbB proton channel family C2859_11230 PF04055 Radical SAM superfamily C2859_11230 PF13186 Iron-sulfur cluster-binding domain C2859_11245 PF01584 CheW-like domain C2859_11245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_11245 PF01627 Hpt domain C2859_11245 PF02895 Signal transducing histidine kinase, homodimeric domain C2859_11245 PF07194 P2 response regulator binding domain C2859_11250 PF04344 Chemotaxis phosphatase, CheZ C2859_11255 PF00072 Response regulator receiver domain C2859_11260 PF04545 Sigma-70, region 4 C2859_11260 PF04539 Sigma-70 region 3 C2859_11260 PF04542 Sigma-70 region 2 C2859_11265 PF10609 NUBPL iron-transfer P-loop NTPase C2859_11270 PF00448 SRP54-type protein, GTPase domain C2859_11275 PF00771 FHIPEP family C2859_11280 PF01312 FlhB HrpN YscU SpaS Family C2859_11285 PF00563 EAL domain C2859_11285 PF00990 Diguanylate cyclase, GGDEF domain C2859_11285 PF03707 Bacterial signalling protein N terminal repeat C2859_11290 PF03707 Bacterial signalling protein N terminal repeat C2859_11290 PF13188 PAS domain C2859_11290 PF00990 Diguanylate cyclase, GGDEF domain C2859_11290 PF00563 EAL domain C2859_11300 PF00563 EAL domain C2859_11300 PF03707 Bacterial signalling protein N terminal repeat C2859_11300 PF00990 Diguanylate cyclase, GGDEF domain C2859_11300 PF13188 PAS domain C2859_11305 PF01311 Bacterial export proteins, family 1 C2859_11310 PF01313 Bacterial export proteins, family 3 C2859_11320 PF00813 FliP family C2859_11325 PF04347 Flagellar biosynthesis protein, FliO C2859_11330 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C2859_11335 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C2859_11335 PF02154 Flagellar motor switch protein FliM C2859_11355 PF18269 T3SS EscN ATPase C-terminal domain C2859_11355 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C2859_11365 PF14842 FliG N-terminal domain C2859_11365 PF14841 FliG middle domain C2859_11365 PF01706 FliG C-terminal domain C2859_11370 PF01514 Secretory protein of YscJ/FliF family C2859_11370 PF08345 Flagellar M-ring protein C-terminal C2859_11375 PF02049 Flagellar hook-basal body complex protein FliE C2859_11380 PF00534 Glycosyl transferases group 1 C2859_11380 PF00535 Glycosyl transferase family 2 C2859_11385 PF04230 Polysaccharide pyruvyl transferase C2859_11420 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C2859_11420 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C2859_11430 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C2859_11435 PF02954 Bacterial regulatory protein, Fis family C2859_11435 PF00072 Response regulator receiver domain C2859_11435 PF00158 Sigma-54 interaction domain C2859_11440 PF01339 CheB methylesterase C2859_11440 PF00072 Response regulator receiver domain C2859_11445 PF00309 Sigma-54 factor, Activator interacting domain (AID) C2859_11445 PF04963 Sigma-54 factor, core binding domain C2859_11445 PF04552 Sigma-54, DNA binding domain C2859_11450 PF00072 Response regulator receiver domain C2859_11450 PF00196 Bacterial regulatory proteins, luxR family C2859_11465 PF02561 Flagellar protein FliS C2859_11470 PF02465 Flagellar hook-associated protein 2 N-terminus C2859_11470 PF07195 Flagellar hook-associated protein 2 C-terminus C2859_11470 PF07196 Flagellin hook IN motif C2859_11475 PF00700 Bacterial flagellin C-terminal helical region C2859_11475 PF00669 Bacterial flagellin N-terminal helical region C2859_11480 PF00669 Bacterial flagellin N-terminal helical region C2859_11480 PF00700 Bacterial flagellin C-terminal helical region C2859_11485 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C2859_11485 PF07196 Flagellin hook IN motif C2859_11490 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase C2859_11490 PF10135 Rod binding protein C2859_11495 PF02119 Flagellar P-ring protein C2859_11500 PF02107 Flagellar L-ring protein C2859_11505 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C2859_11505 PF00460 Flagella basal body rod protein C2859_11515 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C2859_11515 PF00460 Flagella basal body rod protein C2859_11520 PF07559 Flagellar basal body protein FlaE C2859_11520 PF00460 Flagella basal body rod protein C2859_11520 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C2859_11525 PF03963 Flagellar hook capping protein - N-terminal region C2859_11530 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C2859_11530 PF00460 Flagella basal body rod protein C2859_11540 PF00072 Response regulator receiver domain C2859_11540 PF01584 CheW-like domain C2859_11560 PF00512 His Kinase A (phospho-acceptor) domain C2859_11560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_11560 PF00989 PAS fold C2859_11560 PF13188 PAS domain C2859_11560 PF13426 PAS domain C2859_11565 PF03707 Bacterial signalling protein N terminal repeat C2859_11565 PF00563 EAL domain C2859_11565 PF00990 Diguanylate cyclase, GGDEF domain C2859_11570 PF07730 Histidine kinase C2859_11570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_11575 PF03707 Bacterial signalling protein N terminal repeat C2859_11575 PF00563 EAL domain C2859_11575 PF00990 Diguanylate cyclase, GGDEF domain C2859_11585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2859_11585 PF12729 Four helix bundle sensory module for signal transduction C2859_11585 PF00672 HAMP domain C2859_11590 PF04356 Protein of unknown function (DUF489) C2859_11600 PF00293 NUDIX domain C2859_11605 PF02617 ATP-dependent Clp protease adaptor protein ClpS C2859_11610 PF10431 C-terminal, D2-small domain, of ClpB protein C2859_11610 PF00004 ATPase family associated with various cellular activities (AAA) C2859_11610 PF17871 AAA lid domain C2859_11610 PF02861 Clp amino terminal domain, pathogenicity island component C2859_11610 PF07724 AAA domain (Cdc48 subfamily) C2859_11615 PF01176 Translation initiation factor 1A / IF-1 C2859_11620 PF03588 Leucyl/phenylalanyl-tRNA protein transferase C2859_11630 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2859_11635 PF13491 4TM region of DNA translocase FtsK/SpoIIIE C2859_11635 PF17854 FtsK alpha domain C2859_11635 PF01580 FtsK/SpoIIIE family C2859_11635 PF09397 Ftsk gamma domain C2859_11645 PF03548 Outer membrane lipoprotein carrier protein LolA C2859_11655 PF00004 ATPase family associated with various cellular activities (AAA) C2859_11655 PF16193 AAA C-terminal domain C2859_11655 PF12002 MgsA AAA+ ATPase C terminal C2859_11660 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C2859_11670 PF02803 Thiolase, C-terminal domain C2859_11670 PF00108 Thiolase, N-terminal domain C2859_11675 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C2859_11675 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C2859_11675 PF00378 Enoyl-CoA hydratase/isomerase C2859_11685 PF00334 Nucleoside diphosphate kinase C2859_11690 PF04055 Radical SAM superfamily C2859_11700 PF13464 Domain of unknown function (DUF4115) C2859_11710 PF13360 PQQ-like domain C2859_11710 PF01011 PQQ enzyme repeat C2859_11715 PF01926 50S ribosome-binding GTPase C2859_11715 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal C2859_11720 PF03453 MoeA N-terminal region (domain I and II) C2859_11720 PF00994 Probable molybdopterin binding domain C2859_11720 PF03454 MoeA C-terminal region (domain IV) C2859_11725 PF00899 ThiF family C2859_11755 PF13823 Alcohol dehydrogenase GroES-associated C2859_11755 PF00107 Zinc-binding dehydrogenase C2859_11755 PF08240 Alcohol dehydrogenase GroES-like domain C2859_11765 PF03372 Endonuclease/Exonuclease/phosphatase family C2859_11775 PF00994 Probable molybdopterin binding domain C2859_11775 PF03454 MoeA C-terminal region (domain IV) C2859_11775 PF03453 MoeA N-terminal region (domain I and II) C2859_11780 PF12804 MobA-like NTP transferase domain C2859_11790 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C2859_11790 PF10414 Sirohaem synthase dimerisation region C2859_11790 PF14824 Sirohaem biosynthesis protein central C2859_11820 PF05974 Domain of unknown function (DUF892) C2859_11840 PF00990 Diguanylate cyclase, GGDEF domain C2859_11840 PF08447 PAS fold C2859_11840 PF00563 EAL domain C2859_11840 PF08448 PAS fold C2859_11845 PF12951 Passenger-associated-transport-repeat C2859_11850 PF00072 Response regulator receiver domain C2859_11850 PF00196 Bacterial regulatory proteins, luxR family C2859_11855 PF00072 Response regulator receiver domain C2859_11855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_11855 PF13426 PAS domain C2859_11855 PF08448 PAS fold C2859_11855 PF00512 His Kinase A (phospho-acceptor) domain C2859_11865 PF00873 AcrB/AcrD/AcrF family C2859_11870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2859_11880 PF03797 Autotransporter beta-domain C2859_11880 PF00082 Subtilase family C2859_11890 PF06580 Histidine kinase C2859_11890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_11890 PF13492 GAF domain C2859_11890 PF07694 5TMR of 5TMR-LYT C2859_11895 PF00072 Response regulator receiver domain C2859_11895 PF04397 LytTr DNA-binding domain C2859_11905 PF00144 Beta-lactamase C2859_11915 PF07995 Glucose / Sorbosone dehydrogenase C2859_11920 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C2859_11930 PF09335 SNARE associated Golgi protein C2859_11935 PF01494 FAD binding domain C2859_11945 PF03621 MbtH-like protein C2859_11950 PF00975 Thioesterase domain C2859_11975 PF02810 SEC-C motif C2859_11975 PF01043 SecA preprotein cross-linking domain C2859_11975 PF07516 SecA Wing and Scaffold domain C2859_11975 PF07517 SecA DEAD-like domain C2859_11980 PF00106 short chain dehydrogenase C2859_11985 PF05199 GMC oxidoreductase C2859_11985 PF00732 GMC oxidoreductase C2859_11990 PF12697 Alpha/beta hydrolase family C2859_11990 PF08241 Methyltransferase domain C2859_12040 PF01106 NifU-like domain C2859_12045 PF01329 Pterin 4 alpha carbinolamine dehydratase C2859_12055 PF02535 ZIP Zinc transporter C2859_12060 PF11737 Protein of unknown function (DUF3300) C2859_12065 PF00849 RNA pseudouridylate synthase C2859_12065 PF01479 S4 domain C2859_12070 PF12111 Polyribonucleotide phosphorylase C terminal C2859_12070 PF10150 Ribonuclease E/G family C2859_12070 PF00575 S1 RNA binding domain C2859_12075 PF00072 Response regulator receiver domain C2859_12075 PF00196 Bacterial regulatory proteins, luxR family C2859_12090 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C2859_12100 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C2859_12100 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C2859_12100 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C2859_12110 PF17837 4'-phosphopantetheinyl transferase N-terminal domain C2859_12110 PF01648 4'-phosphopantetheinyl transferase superfamily C2859_12115 PF00501 AMP-binding enzyme C2859_12115 PF13193 AMP-binding enzyme C-terminal domain C2859_12115 PF00550 Phosphopantetheine attachment site C2859_12115 PF00668 Condensation domain C2859_12120 PF00501 AMP-binding enzyme C2859_12120 PF00668 Condensation domain C2859_12120 PF13193 AMP-binding enzyme C-terminal domain C2859_12120 PF00202 Aminotransferase class-III C2859_12120 PF16197 Ketoacyl-synthetase C-terminal extension C2859_12120 PF02801 Beta-ketoacyl synthase, C-terminal domain C2859_12120 PF00550 Phosphopantetheine attachment site C2859_12120 PF00109 Beta-ketoacyl synthase, N-terminal domain C2859_12160 PF13614 AAA domain C2859_12195 PF00436 Single-strand binding protein family C2859_12200 PF01751 Toprim domain C2859_12200 PF01131 DNA topoisomerase C2859_12205 PF00145 C-5 cytosine-specific DNA methylase C2859_12305 PF00580 UvrD/REP helicase N-terminal domain C2859_12305 PF13361 UvrD-like helicase C-terminal domain C2859_12400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2859_12400 PF03466 LysR substrate binding domain C2859_12405 PF07690 Major Facilitator Superfamily C2859_12420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C2859_12420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C2859_12420 PF02770 Acyl-CoA dehydrogenase, middle domain C2859_12425 PF00132 Bacterial transferase hexapeptide (six repeats) C2859_12430 PF09297 NADH pyrophosphatase zinc ribbon domain C2859_12430 PF00293 NUDIX domain C2859_12440 PF07690 Major Facilitator Superfamily C2859_12470 PF00892 EamA-like transporter family C2859_12485 PF00106 short chain dehydrogenase C2859_12490 PF00550 Phosphopantetheine attachment site C2859_12490 PF00501 AMP-binding enzyme C2859_12490 PF00668 Condensation domain C2859_12490 PF13193 AMP-binding enzyme C-terminal domain C2859_12500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2859_12500 PF03466 LysR substrate binding domain C2859_12555 PF04610 TrbL/VirB6 plasmid conjugal transfer protein C2859_12595 PF11398 Protein of unknown function (DUF2813) C2859_12600 PF13361 UvrD-like helicase C-terminal domain C2859_12600 PF12705 PD-(D/E)XK nuclease superfamily C2859_12600 PF00580 UvrD/REP helicase N-terminal domain C2859_12610 PF03466 LysR substrate binding domain C2859_12610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2859_12615 PF01381 Helix-turn-helix C2859_12625 PF00589 Phage integrase family C2859_12625 PF13356 Arm DNA-binding domain C2859_12645 PF01066 CDP-alcohol phosphatidyltransferase C2859_12650 PF01541 GIY-YIG catalytic domain C2859_12650 PF08459 UvrC Helix-hairpin-helix N-terminal C2859_12650 PF02151 UvrB/uvrC motif C2859_12660 PF01451 Low molecular weight phosphotyrosine protein phosphatase C2859_12665 PF02348 Cytidylyltransferase C2859_12670 PF02606 Tetraacyldisaccharide-1-P 4'-kinase C2859_12675 PF00664 ABC transporter transmembrane region C2859_12675 PF00005 ABC transporter C2859_12685 PF01618 MotA/TolQ/ExbB proton channel family C2859_12690 PF00753 Metallo-beta-lactamase superfamily C2859_12690 PF03772 Competence protein C2859_12700 PF00005 ABC transporter C2859_12705 PF12704 MacB-like periplasmic core domain C2859_12705 PF02687 FtsX-like permease family C2859_12715 PF03937 Flavinator of succinate dehydrogenase C2859_12720 PF13085 2Fe-2S iron-sulfur cluster binding domain C2859_12730 PF02910 Fumarate reductase flavoprotein C-term C2859_12730 PF00890 FAD binding domain C2859_12735 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C2859_12740 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C2859_12755 PF00005 ABC transporter C2859_12755 PF17912 MalK OB fold domain C2859_12760 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain C2859_12760 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain C2859_12765 PF02685 Glucokinase C2859_12770 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase C2859_12775 PF00920 Dehydratase family C2859_12780 PF01081 KDPG and KHG aldolase C2859_12790 PF00873 AcrB/AcrD/AcrF family C2859_12795 PF00873 AcrB/AcrD/AcrF family C2859_12800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2859_12810 PF00034 Cytochrome c C2859_12855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_12855 PF00512 His Kinase A (phospho-acceptor) domain C2859_12855 PF00072 Response regulator receiver domain C2859_12855 PF09308 LuxQ, periplasmic C2859_12860 PF00575 S1 RNA binding domain C2859_12860 PF17674 HHH domain C2859_12860 PF16921 Tex protein YqgF-like domain C2859_12860 PF09371 Tex-like protein N-terminal domain C2859_12870 PF01266 FAD dependent oxidoreductase C2859_12870 PF00355 Rieske [2Fe-2S] domain C2859_12885 PF00561 alpha/beta hydrolase fold C2859_12895 PF01066 CDP-alcohol phosphatidyltransferase C2859_12915 PF03618 Kinase/pyrophosphorylase C2859_12920 PF00391 PEP-utilising enzyme, mobile domain C2859_12920 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain C2859_12920 PF02896 PEP-utilising enzyme, TIM barrel domain C2859_12925 PF05552 Conserved TM helix C2859_12925 PF00924 Mechanosensitive ion channel C2859_12930 PF00929 Exonuclease C2859_12935 PF14437 MafB19-like deaminase C2859_12940 PF01325 Iron dependent repressor, N-terminal DNA binding domain C2859_12940 PF02742 Iron dependent repressor, metal binding and dimerisation domain C2859_12945 PF01566 Natural resistance-associated macrophage protein C2859_12950 PF00561 alpha/beta hydrolase fold C2859_12965 PF05977 Transmembrane secretion effector C2859_12970 PF07969 Amidohydrolase family C2859_12980 PF00857 Isochorismatase family C2859_12995 PF00072 Response regulator receiver domain C2859_12995 PF00196 Bacterial regulatory proteins, luxR family C2859_13015 PF03466 LysR substrate binding domain C2859_13015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2859_13020 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C2859_13020 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus C2859_13020 PF00361 Proton-conducting membrane transporter C2859_13025 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) C2859_13030 PF13476 AAA domain C2859_13045 PF02796 Helix-turn-helix domain of resolvase C2859_13045 PF00239 Resolvase, N terminal domain C2859_13050 PF09386 Antitoxin ParD C2859_13055 PF05016 ParE toxin of type II toxin-antitoxin system, parDE C2859_13120 PF13356 Arm DNA-binding domain C2859_13120 PF00589 Phage integrase family C2859_13125 PF00958 GMP synthase C terminal domain C2859_13125 PF02540 NAD synthase C2859_13125 PF00117 Glutamine amidotransferase class-I C2859_13130 PF00571 CBS domain C2859_13130 PF00478 IMP dehydrogenase / GMP reductase domain C2859_13135 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain C2859_13135 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain C2859_13145 PF00999 Sodium/hydrogen exchanger family C2859_13145 PF02254 TrkA-N domain C2859_13155 PF00483 Nucleotidyl transferase C2859_13160 PF02719 Polysaccharide biosynthesis protein C2859_13165 PF00953 Glycosyl transferase family 4 C2859_13170 PF18073 Rubredoxin metal binding domain C2859_13180 PF00216 Bacterial DNA-binding protein C2859_13185 PF00575 S1 RNA binding domain C2859_13190 PF02224 Cytidylate kinase C2859_13195 PF00444 Ribosomal protein L36 C2859_13210 PF04371 Porphyromonas-type peptidyl-arginine deiminase C2859_13215 PF00795 Carbon-nitrogen hydrolase C2859_13240 PF00528 Binding-protein-dependent transport system inner membrane component C2859_13245 PF00528 Binding-protein-dependent transport system inner membrane component C2859_13265 PF00356 Bacterial regulatory proteins, lacI family C2859_13275 PF03795 YCII-related domain C2859_13280 PF02616 Segregation and condensation protein ScpA C2859_13285 PF04079 Segregation and condensation complex subunit ScpB C2859_13290 PF01479 S4 domain C2859_13290 PF00849 RNA pseudouridylate synthase C2859_13305 PF00795 Carbon-nitrogen hydrolase C2859_13310 PF00155 Aminotransferase class I and II C2859_13315 PF00005 ABC transporter C2859_13320 PF03379 CcmB protein C2859_13325 PF01578 Cytochrome C assembly protein C2859_13335 PF03100 CcmE C2859_13340 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal C2859_13340 PF01578 Cytochrome C assembly protein C2859_13345 PF08534 Redoxin C2859_13350 PF03918 Cytochrome C biogenesis protein C2859_13360 PF00561 alpha/beta hydrolase fold C2859_13365 PF00313 'Cold-shock' DNA-binding domain C2859_13370 PF00664 ABC transporter transmembrane region C2859_13370 PF00005 ABC transporter C2859_13375 PF00005 ABC transporter C2859_13375 PF00664 ABC transporter transmembrane region C2859_13380 PF01654 Cytochrome bd terminal oxidase subunit I C2859_13385 PF02322 Cytochrome bd terminal oxidase subunit II C2859_13405 PF02129 X-Pro dipeptidyl-peptidase (S15 family) C2859_13405 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain C2859_13415 PF00171 Aldehyde dehydrogenase family C2859_13420 PF00696 Amino acid kinase family C2859_13420 PF01472 PUA domain C2859_13430 PF00206 Lyase C2859_13435 PF01118 Semialdehyde dehydrogenase, NAD binding domain C2859_13445 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase C2859_13445 PF00696 Amino acid kinase family C2859_13460 PF00764 Arginosuccinate synthase C2859_13465 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C2859_13465 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C2859_13475 PF09190 DALR domain C2859_13475 PF01406 tRNA synthetases class I (C) catalytic domain C2859_13480 PF02657 Fe-S metabolism associated domain C2859_13490 PF01258 Prokaryotic dksA/traR C4-type zinc finger C2859_13495 PF01809 Putative membrane protein insertion efficiency factor C2859_13500 PF01979 Amidohydrolase family C2859_13505 PF01551 Peptidase family M23 C2859_13505 PF08460 Bacterial SH3 domain C2859_13525 PF06751 Ethanolamine ammonia lyase large subunit (EutB) C2859_13530 PF05985 Ethanolamine ammonia-lyase light chain (EutC) C2859_13540 PF00753 Metallo-beta-lactamase superfamily C2859_13575 PF00295 Glycosyl hydrolases family 28 C2859_13585 PF13419 Haloacid dehalogenase-like hydrolase C2859_13595 PF01979 Amidohydrolase family C2859_13605 PF01132 Elongation factor P (EF-P) OB domain C2859_13605 PF08207 Elongation factor P (EF-P) KOW-like domain C2859_13605 PF09285 Elongation factor P, C-terminal C2859_13610 PF04055 Radical SAM superfamily C2859_13615 PF00563 EAL domain C2859_13615 PF13188 PAS domain C2859_13615 PF00990 Diguanylate cyclase, GGDEF domain C2859_13615 PF03707 Bacterial signalling protein N terminal repeat C2859_13625 PF00588 SpoU rRNA Methylase family C2859_13630 PF00459 Inositol monophosphatase family C2859_13635 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C2859_13635 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C2859_13640 PF00545 ribonuclease C2859_13660 PF00270 DEAD/DEAH box helicase C2859_13660 PF00271 Helicase conserved C-terminal domain C2859_13660 PF03880 DbpA RNA binding domain C2859_13665 PF00156 Phosphoribosyl transferase domain C2859_13670 PF02696 Uncharacterized ACR, YdiU/UPF0061 family C2859_13675 PF00135 Carboxylesterase family C2859_13680 PF02798 Glutathione S-transferase, N-terminal domain C2859_13680 PF14497 Glutathione S-transferase, C-terminal domain C2859_13685 PF00313 'Cold-shock' DNA-binding domain C2859_13690 PF07152 YaeQ protein C2859_13700 PF00990 Diguanylate cyclase, GGDEF domain C2859_13700 PF00072 Response regulator receiver domain C2859_13700 PF00563 EAL domain C2859_13705 PF01435 Peptidase family M48 C2859_13710 PF00749 tRNA synthetases class I (E and Q), catalytic domain C2859_13715 PF00106 short chain dehydrogenase C2859_13720 PF05233 PHB accumulation regulatory domain C2859_13720 PF07879 PHB/PHA accumulation regulator DNA-binding domain C2859_13740 PF08676 MutL C terminal dimerisation domain C2859_13740 PF01119 DNA mismatch repair protein, C-terminal domain C2859_13745 PF11741 AMIN domain C2859_13745 PF01520 N-acetylmuramoyl-L-alanine amidase C2859_13750 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE C2859_13755 PF01256 Carbohydrate kinase C2859_13755 PF03853 YjeF-related protein N-terminus C2859_13760 PF08331 Domain of unknown function (DUF1730) C2859_13765 PF13742 OB-fold nucleic acid binding domain C2859_13765 PF02601 Exonuclease VII, large subunit C2859_13775 PF03781 Sulfatase-modifying factor enzyme 1 C2859_13790 PF01612 3'-5' exonuclease C2859_13790 PF00570 HRDC domain C2859_13795 PF04679 ATP dependent DNA ligase C terminal region C2859_13795 PF01068 ATP dependent DNA ligase domain C2859_13795 PF13298 DNA polymerase Ligase (LigD) C2859_13820 PF01584 CheW-like domain C2859_13825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2859_13825 PF00672 HAMP domain C2859_13825 PF02743 Cache domain C2859_13830 PF02245 Methylpurine-DNA glycosylase (MPG) C2859_13835 PF00271 Helicase conserved C-terminal domain C2859_13835 PF00270 DEAD/DEAH box helicase C2859_13835 PF08494 DEAD/H associated C2859_13855 PF04386 Stringent starvation protein B C2859_13860 PF00043 Glutathione S-transferase, C-terminal domain C2859_13860 PF02798 Glutathione S-transferase, N-terminal domain C2859_13865 PF02167 Cytochrome C1 family C2859_13870 PF00033 Cytochrome b/b6/petB C2859_13870 PF00032 Cytochrome b(C-terminal)/b6/petD C2859_13875 PF00355 Rieske [2Fe-2S] domain C2859_13875 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal C2859_13885 PF01464 Transglycosylase SLT domain C2859_13900 PF04055 Radical SAM superfamily C2859_13900 PF01938 TRAM domain C2859_13900 PF00919 Uncharacterized protein family UPF0004 C2859_13905 PF02562 PhoH-like protein C2859_13915 PF02130 Uncharacterized protein family UPF0054 C2859_13925 PF03471 Transporter associated domain C2859_13925 PF00571 CBS domain C2859_13940 PF00171 Aldehyde dehydrogenase family C2859_13945 PF00528 Binding-protein-dependent transport system inner membrane component C2859_13950 PF00528 Binding-protein-dependent transport system inner membrane component C2859_13960 PF02321 Outer membrane efflux protein C2859_13965 PF07690 Major Facilitator Superfamily C2859_13970 PF13533 Biotin-lipoyl like C2859_13975 PF13416 Bacterial extracellular solute-binding protein C2859_13980 PF00202 Aminotransferase class-III C2859_13985 PF00120 Glutamine synthetase, catalytic domain C2859_13995 PF00120 Glutamine synthetase, catalytic domain C2859_14000 PF01266 FAD dependent oxidoreductase C2859_14005 PF00072 Response regulator receiver domain C2859_14005 PF00990 Diguanylate cyclase, GGDEF domain C2859_14015 PF07690 Major Facilitator Superfamily C2859_14015 PF00083 Sugar (and other) transporter C2859_14030 PF00384 Molybdopterin oxidoreductase C2859_14035 PF02634 FdhD/NarQ family C2859_14040 PF07690 Major Facilitator Superfamily C2859_14055 PF00202 Aminotransferase class-III C2859_14065 PF04286 Protein of unknown function (DUF445) C2859_14070 PF00672 HAMP domain C2859_14070 PF00512 His Kinase A (phospho-acceptor) domain C2859_14070 PF01627 Hpt domain C2859_14070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_14070 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C2859_14070 PF00072 Response regulator receiver domain C2859_14075 PF00072 Response regulator receiver domain C2859_14080 PF07690 Major Facilitator Superfamily C2859_14095 PF05088 Bacterial NAD-glutamate dehydrogenase C2859_14105 PF00529 HlyD membrane-fusion protein of T1SS C2859_14105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2859_14110 PF00873 AcrB/AcrD/AcrF family C2859_14115 PF00356 Bacterial regulatory proteins, lacI family C2859_14120 PF05524 PEP-utilising enzyme, N-terminal C2859_14120 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C2859_14120 PF00381 PTS HPr component phosphorylation site C2859_14120 PF02896 PEP-utilising enzyme, TIM barrel domain C2859_14120 PF00391 PEP-utilising enzyme, mobile domain C2859_14125 PF00294 pfkB family carbohydrate kinase C2859_14130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C2859_14140 PF01593 Flavin containing amine oxidoreductase C2859_14155 PF07549 SecD/SecF GG Motif C2859_14155 PF02355 Protein export membrane protein C2859_14160 PF07549 SecD/SecF GG Motif C2859_14160 PF13721 SecD export protein N-terminal TM region C2859_14160 PF02355 Protein export membrane protein C2859_14165 PF02699 Preprotein translocase subunit C2859_14170 PF01702 Queuine tRNA-ribosyltransferase C2859_14175 PF02547 Queuosine biosynthesis protein C2859_14220 PF00759 Glycosyl hydrolase family 9 C2859_14220 PF02927 Cellulase N-terminal ig-like domain C2859_14230 PF00037 4Fe-4S binding domain C2859_14245 PF01467 Cytidylyltransferase-like C2859_14255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_14255 PF00183 Hsp90 protein C2859_14300 PF00593 TonB dependent receptor C2859_14300 PF07715 TonB-dependent Receptor Plug Domain C2859_14310 PF04616 Glycosyl hydrolases family 43 C2859_14315 PF07532 Bacterial Ig-like domain (group 4) C2859_14340 PF09286 Pro-kumamolisin, activation domain C2859_14340 PF00082 Subtilase family C2859_14375 PF13520 Amino acid permease C2859_14390 PF01321 Creatinase/Prolidase N-terminal domain C2859_14390 PF00557 Metallopeptidase family M24 C2859_14395 PF00171 Aldehyde dehydrogenase family C2859_14400 PF00701 Dihydrodipicolinate synthetase family C2859_14405 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2859_14405 PF04324 BFD-like [2Fe-2S] binding domain C2859_14415 PF01266 FAD dependent oxidoreductase C2859_14420 PF05544 Proline racemase C2859_14430 PF02881 SRP54-type protein, helical bundle domain C2859_14430 PF00448 SRP54-type protein, GTPase domain C2859_14440 PF00730 HhH-GPD superfamily base excision DNA repair protein C2859_14440 PF14815 NUDIX domain C2859_14440 PF00633 Helix-hairpin-helix motif C2859_14440 PF10576 Iron-sulfur binding domain of endonuclease III C2859_14445 PF04362 Bacterial Fe(2+) trafficking C2859_14450 PF13426 PAS domain C2859_14450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_14450 PF00072 Response regulator receiver domain C2859_14480 PF08212 Lipocalin-like domain C2859_14495 PF02770 Acyl-CoA dehydrogenase, middle domain C2859_14495 PF12806 Acetyl-CoA dehydrogenase C-terminal like C2859_14495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C2859_14495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C2859_14505 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C2859_14505 PF02780 Transketolase, C-terminal domain C2859_14505 PF02779 Transketolase, pyrimidine binding domain C2859_14525 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family C2859_14530 PF00753 Metallo-beta-lactamase superfamily C2859_14530 PF16123 Hydroxyacylglutathione hydrolase C-terminus C2859_14535 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C2859_14535 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C2859_14550 PF03808 Glycosyl transferase WecB/TagA/CpsF family C2859_14565 PF14667 Polysaccharide biosynthesis C-terminal domain C2859_14575 PF00534 Glycosyl transferases group 1 C2859_14575 PF13439 Glycosyltransferase Family 4 C2859_14595 PF02397 Bacterial sugar transferase C2859_14615 PF13411 MerR HTH family regulatory protein C2859_14620 PF00216 Bacterial DNA-binding protein C2859_14625 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain C2859_14625 PF01588 Putative tRNA binding domain C2859_14625 PF03147 Ferredoxin-fold anticodon binding domain C2859_14625 PF03484 tRNA synthetase B5 domain C2859_14625 PF03483 B3/4 domain C2859_14630 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain C2859_14630 PF01409 tRNA synthetases class II core domain (F) C2859_14635 PF00453 Ribosomal protein L20 C2859_14640 PF01632 Ribosomal protein L35 C2859_14645 PF05198 Translation initiation factor IF-3, N-terminal domain C2859_14645 PF00707 Translation initiation factor IF-3, C-terminal domain C2859_14650 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C2859_14650 PF02824 TGS domain C2859_14650 PF03129 Anticodon binding domain C2859_14650 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C2859_14655 PF00356 Bacterial regulatory proteins, lacI family C2859_14660 PF00128 Alpha amylase, catalytic domain C2859_14660 PF00686 Starch binding domain C2859_14675 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation C2859_14675 PF10566 Glycoside hydrolase 97 C2859_14675 PF14508 Glycosyl-hydrolase 97 N-terminal C2859_14690 PF00128 Alpha amylase, catalytic domain C2859_14805 PF03135 CagE, TrbE, VirB family, component of type IV transporter system C2859_14810 PF05101 Type IV secretory pathway, VirB3-like protein C2859_14820 PF01464 Transglycosylase SLT domain C2859_14825 PF00437 Type II/IV secretion system protein C2859_14830 PF03743 Bacterial conjugation TrbI-like protein C2859_14850 PF02534 Type IV secretory system Conjugative DNA transfer C2859_14865 PF00271 Helicase conserved C-terminal domain C2859_14865 PF02151 UvrB/uvrC motif C2859_14865 PF17757 UvrB interaction domain C2859_14865 PF12344 Ultra-violet resistance protein B C2859_14865 PF04851 Type III restriction enzyme, res subunit C2859_14885 PF05567 Neisseria PilC beta-propeller domain C2859_14905 PF07963 Prokaryotic N-terminal methylation motif C2859_14905 PF00114 Pilin (bacterial filament) C2859_14910 PF03641 Possible lysine decarboxylase C2859_14910 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases C2859_14910 PF11892 Domain of unknown function (DUF3412) C2859_14915 PF00593 TonB dependent receptor C2859_14925 PF01914 MarC family integral membrane protein C2859_14935 PF00462 Glutaredoxin C2859_14940 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C2859_14940 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C2859_14945 PF02222 ATP-grasp domain C2859_14945 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain C2859_14950 PF00731 AIR carboxylase C2859_14960 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain C2859_14960 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain C2859_14970 PF00013 KH domain C2859_14970 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain C2859_14970 PF03725 3' exoribonuclease family, domain 2 C2859_14970 PF00575 S1 RNA binding domain C2859_14970 PF01138 3' exoribonuclease family, domain 1 C2859_14975 PF00312 Ribosomal protein S15 C2859_14980 PF01509 TruB family pseudouridylate synthase (N terminal domain) C2859_14980 PF09157 Pseudouridine synthase II TruB, C-terminal C2859_14980 PF16198 tRNA pseudouridylate synthase B C-terminal domain C2859_14985 PF02033 Ribosome-binding factor A C2859_14990 PF04760 Translation initiation factor IF-2, N-terminal region C2859_14990 PF08364 Bacterial translation initiation factor IF-2 associated region C2859_14990 PF00009 Elongation factor Tu GTP binding domain C2859_14990 PF11987 Translation-initiation factor 2 C2859_14995 PF08529 NusA N-terminal domain C2859_14995 PF13184 NusA-like KH domain C2859_14995 PF00575 S1 RNA binding domain C2859_15000 PF17384 RimP C-terminal SH3 domain C2859_15000 PF02576 RimP N-terminal domain C2859_15010 PF00361 Proton-conducting membrane transporter C2859_15015 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus C2859_15015 PF00361 Proton-conducting membrane transporter C2859_15020 PF00361 Proton-conducting membrane transporter C2859_15020 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C2859_15025 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C2859_15030 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 C2859_15035 PF12838 4Fe-4S dicluster domain C2859_15040 PF00146 NADH dehydrogenase C2859_15045 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C2859_15045 PF00384 Molybdopterin oxidoreductase C2859_15045 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal C2859_15050 PF10531 SLBB domain C2859_15050 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C2859_15050 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C2859_15060 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit C2859_15065 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit C2859_15070 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C2859_15075 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 C2859_15090 PF00121 Triosephosphate isomerase C2859_15095 PF00106 short chain dehydrogenase C2859_15110 PF00990 Diguanylate cyclase, GGDEF domain C2859_15110 PF03707 Bacterial signalling protein N terminal repeat C2859_15110 PF00563 EAL domain C2859_15125 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C2859_15125 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C2859_15125 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C2859_15125 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C2859_15130 PF01039 Carboxyl transferase domain C2859_15130 PF17848 Acetyl-coA carboxylase zinc finger domain C2859_15135 PF00290 Tryptophan synthase alpha chain C2859_15145 PF00291 Pyridoxal-phosphate dependent enzyme C2859_15150 PF03466 LysR substrate binding domain C2859_15150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2859_15155 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase C2859_15160 PF01416 tRNA pseudouridine synthase C2859_15180 PF02774 Semialdehyde dehydrogenase, dimerisation domain C2859_15180 PF01118 Semialdehyde dehydrogenase, NAD binding domain C2859_15185 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C2859_15185 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C2859_15190 PF01264 Chorismate synthase C2859_15195 PF05175 Methyltransferase small domain C2859_15200 PF02630 SCO1/SenC C2859_15205 PF02666 Phosphatidylserine decarboxylase C2859_15220 PF05872 Bacterial protein of unknown function (DUF853) C2859_15225 PF00293 NUDIX domain C2859_15245 PF01272 Transcription elongation factor, GreA/GreB, C-term C2859_15245 PF03449 Transcription elongation factor, N-terminal C2859_15250 PF00919 Uncharacterized protein family UPF0004 C2859_15250 PF04055 Radical SAM superfamily C2859_15250 PF18693 TRAM domain C2859_15260 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin C2859_15295 PF13175 AAA ATPase domain C2859_15300 PF12320 Type 5 capsule protein repressor C-terminal domain C2859_15300 PF00149 Calcineurin-like phosphoesterase C2859_15315 PF01738 Dienelactone hydrolase family C2859_15335 PF00692 dUTPase C2859_15345 PF10609 NUBPL iron-transfer P-loop NTPase C2859_15350 PF07715 TonB-dependent Receptor Plug Domain C2859_15350 PF00593 TonB dependent receptor C2859_15365 PF05649 Peptidase family M13 C2859_15365 PF01431 Peptidase family M13 C2859_15375 PF05649 Peptidase family M13 C2859_15375 PF01431 Peptidase family M13 C2859_15390 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C2859_15395 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C2859_15395 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2859_15400 PF01266 FAD dependent oxidoreductase C2859_15405 PF04235 Protein of unknown function (DUF418) C2859_15410 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C2859_15415 PF00877 NlpC/P60 family C2859_15420 PF00877 NlpC/P60 family C2859_15435 PF00375 Sodium:dicarboxylate symporter family C2859_15440 PF00245 Alkaline phosphatase C2859_15450 PF11734 TilS substrate C-terminal domain C2859_15450 PF09179 TilS substrate binding domain C2859_15450 PF01171 PP-loop family C2859_15455 PF02609 Exonuclease VII small subunit C2859_15460 PF00348 Polyprenyl synthetase C2859_15465 PF14521 Lysine-specific metallo-endopeptidase C2859_15475 PF01523 Putative modulator of DNA gyrase C2859_15480 PF04751 Protein of unknown function (DUF615) C2859_15485 PF01523 Putative modulator of DNA gyrase C2859_15495 PF13116 Protein of unknown function C2859_15495 PF13502 AsmA-like C-terminal region C2859_15500 PF10150 Ribonuclease E/G family C2859_15500 PF00575 S1 RNA binding domain C2859_15505 PF02545 Maf-like protein C2859_15510 PF04402 Protein of unknown function (DUF541) C2859_15525 PF02590 Predicted SPOUT methyltransferase C2859_15540 PF01467 Cytidylyltransferase-like C2859_15555 PF08264 Anticodon-binding domain of tRNA C2859_15555 PF00133 tRNA synthetases class I (I, L, M and V) C2859_15555 PF13603 Leucyl-tRNA synthetase, Domain 2 C2859_15565 PF00085 Thioredoxin C2859_15590 PF04070 Domain of unknown function (DUF378) C2859_15595 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C2859_15605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2859_15605 PF03466 LysR substrate binding domain C2859_15635 PF00005 ABC transporter C2859_15635 PF00664 ABC transporter transmembrane region C2859_15650 PF00873 AcrB/AcrD/AcrF family C2859_15665 PF02321 Outer membrane efflux protein C2859_15670 PF00486 Transcriptional regulatory protein, C terminal C2859_15670 PF00072 Response regulator receiver domain C2859_15675 PF00512 His Kinase A (phospho-acceptor) domain C2859_15675 PF00672 HAMP domain C2859_15675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_15680 PF00999 Sodium/hydrogen exchanger family C2859_15685 PF00144 Beta-lactamase C2859_15690 PF03737 Aldolase/RraA C2859_15715 PF00849 RNA pseudouridylate synthase C2859_15715 PF01479 S4 domain C2859_15720 PF00563 EAL domain C2859_15720 PF00990 Diguanylate cyclase, GGDEF domain C2859_15720 PF08448 PAS fold C2859_15725 PF00270 DEAD/DEAH box helicase C2859_15725 PF00271 Helicase conserved C-terminal domain C2859_15725 PF03880 DbpA RNA binding domain C2859_15770 PF00730 HhH-GPD superfamily base excision DNA repair protein C2859_15770 PF06029 AlkA N-terminal domain C2859_15775 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C2859_15775 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C2859_15785 PF00654 Voltage gated chloride channel C2859_15790 PF08240 Alcohol dehydrogenase GroES-like domain C2859_15790 PF00107 Zinc-binding dehydrogenase C2859_15810 PF07715 TonB-dependent Receptor Plug Domain C2859_15810 PF00593 TonB dependent receptor C2859_15830 PF13406 Transglycosylase SLT domain C2859_15835 PF01526 Tn3 transposase DDE domain C2859_15835 PF13700 Domain of unknown function (DUF4158) C2859_15850 PF01129 NAD:arginine ADP-ribosyltransferase C2859_15880 PF00082 Subtilase family C2859_15880 PF01483 Proprotein convertase P-domain C2859_15890 PF00082 Subtilase family C2859_15890 PF01483 Proprotein convertase P-domain C2859_15900 PF00248 Aldo/keto reductase family C2859_15905 PF07690 Major Facilitator Superfamily C2859_15910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2859_15910 PF03466 LysR substrate binding domain C2859_15915 PF12833 Helix-turn-helix domain C2859_15915 PF06719 AraC-type transcriptional regulator N-terminus C2859_15925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2859_15925 PF03466 LysR substrate binding domain C2859_15930 PF00248 Aldo/keto reductase family C2859_15935 PF16859 Tetracyclin repressor-like, C-terminal domain C2859_15935 PF00440 Bacterial regulatory proteins, tetR family C2859_15940 PF02321 Outer membrane efflux protein C2859_15945 PF00873 AcrB/AcrD/AcrF family C2859_15950 PF00529 HlyD membrane-fusion protein of T1SS C2859_15950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2859_15960 PF01475 Ferric uptake regulator family C2859_15965 PF00749 tRNA synthetases class I (E and Q), catalytic domain C2859_15990 PF06123 Inner membrane protein CreD C2859_16000 PF00512 His Kinase A (phospho-acceptor) domain C2859_16000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_16000 PF00672 HAMP domain C2859_16005 PF00486 Transcriptional regulatory protein, C terminal C2859_16005 PF00072 Response regulator receiver domain C2859_16010 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ C2859_16025 PF00271 Helicase conserved C-terminal domain C2859_16025 PF00270 DEAD/DEAH box helicase C2859_16025 PF03461 TRCF domain C2859_16025 PF17757 UvrB interaction domain C2859_16025 PF02559 CarD-like/TRCF domain C2859_16035 PF01584 CheW-like domain C2859_16035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_16035 PF01627 Hpt domain C2859_16035 PF02895 Signal transducing histidine kinase, homodimeric domain C2859_16035 PF09078 CheY binding C2859_16040 PF00672 HAMP domain C2859_16040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2859_16040 PF02203 Tar ligand binding domain homologue C2859_16045 PF01584 CheW-like domain C2859_16050 PF00990 Diguanylate cyclase, GGDEF domain C2859_16050 PF00563 EAL domain C2859_16050 PF13426 PAS domain C2859_16055 PF01739 CheR methyltransferase, SAM binding domain C2859_16055 PF03705 CheR methyltransferase, all-alpha domain C2859_16060 PF01339 CheB methylesterase C2859_16060 PF00072 Response regulator receiver domain C2859_16065 PF13091 PLD-like domain C2859_16070 PF01431 Peptidase family M13 C2859_16070 PF05649 Peptidase family M13 C2859_16080 PF00300 Histidine phosphatase superfamily (branch 1) C2859_16085 PF04493 Endonuclease V C2859_16095 PF05726 Pirin C-terminal cupin domain C2859_16095 PF02678 Pirin C2859_16110 PF05726 Pirin C-terminal cupin domain C2859_16110 PF02678 Pirin C2859_16115 PF13722 5TM C-terminal transporter carbon starvation CstA C2859_16115 PF02554 Carbon starvation protein CstA C2859_16170 PF13478 XdhC Rossmann domain C2859_16170 PF02625 XdhC and CoxI family C2859_16175 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C2859_16175 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C2859_16180 PF03450 CO dehydrogenase flavoprotein C-terminal domain C2859_16180 PF00941 FAD binding domain in molybdopterin dehydrogenase C2859_16185 PF00111 2Fe-2S iron-sulfur cluster binding domain C2859_16185 PF01799 [2Fe-2S] binding domain C2859_16185 PF10518 TAT (twin-arginine translocation) pathway signal sequence C2859_16190 PF00550 Phosphopantetheine attachment site C2859_16190 PF00109 Beta-ketoacyl synthase, N-terminal domain C2859_16190 PF14765 Polyketide synthase dehydratase C2859_16190 PF08659 KR domain C2859_16190 PF02801 Beta-ketoacyl synthase, C-terminal domain C2859_16190 PF00698 Acyl transferase domain C2859_16190 PF16197 Ketoacyl-synthetase C-terminal extension C2859_16190 PF08240 Alcohol dehydrogenase GroES-like domain C2859_16190 PF09277 Erythronolide synthase, docking C2859_16190 PF08990 Erythronolide synthase docking C2859_16195 PF00360 Phytochrome region C2859_16195 PF00563 EAL domain C2859_16195 PF01590 GAF domain C2859_16195 PF00990 Diguanylate cyclase, GGDEF domain C2859_16200 PF00436 Single-strand binding protein family C2859_16205 PF00348 Polyprenyl synthetase C2859_16215 PF08245 Mur ligase middle domain C2859_16215 PF02875 Mur ligase family, glutamate ligase domain C2859_16230 PF01842 ACT domain C2859_16230 PF00696 Amino acid kinase family C2859_16235 PF02567 Phenazine biosynthesis-like protein C2859_16240 PF02567 Phenazine biosynthesis-like protein C2859_16250 PF02566 OsmC-like protein C2859_16255 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C2859_16255 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C2859_16260 PF03652 Holliday junction resolvase C2859_16265 PF02622 Uncharacterized ACR, COG1678 C2859_16275 PF13673 Acetyltransferase (GNAT) domain C2859_16275 PF00958 GMP synthase C terminal domain C2859_16275 PF00117 Glutamine amidotransferase class-I C2859_16275 PF13302 Acetyltransferase (GNAT) domain C2859_16275 PF03352 Methyladenine glycosylase C2859_16290 PF00437 Type II/IV secretion system protein C2859_16295 PF00437 Type II/IV secretion system protein C2859_16300 PF01168 Alanine racemase, N-terminal domain C2859_16305 PF14748 Pyrroline-5-carboxylate reductase dimerisation C2859_16305 PF03807 NADP oxidoreductase coenzyme F420-dependent C2859_16315 PF01551 Peptidase family M23 C2859_16335 PF01965 DJ-1/PfpI family C2859_16345 PF02082 Transcriptional regulator C2859_16350 PF01458 Uncharacterized protein family (UPF0051) C2859_16355 PF00005 ABC transporter C2859_16360 PF01458 Uncharacterized protein family (UPF0051) C2859_16365 PF00266 Aminotransferase class-V C2859_16375 PF00355 Rieske [2Fe-2S] domain C2859_16380 PF00593 TonB dependent receptor C2859_16380 PF07715 TonB-dependent Receptor Plug Domain C2859_16385 PF13640 2OG-Fe(II) oxygenase superfamily C2859_16385 PF18331 PKHD-type hydroxylase C-terminal domain C2859_16410 PF02424 ApbE family C2859_16415 PF00175 Oxidoreductase NAD-binding domain C2859_16415 PF00258 Flavodoxin C2859_16415 PF00667 FAD binding domain C2859_16445 PF01636 Phosphotransferase enzyme family C2859_16450 PF00483 Nucleotidyl transferase C2859_16455 PF00308 Bacterial dnaA protein C2859_16460 PF01594 AI-2E family transporter C2859_16470 PF02769 AIR synthase related protein, C-terminal domain C2859_16470 PF00586 AIR synthase related protein, N-terminal domain C2859_16480 PF00551 Formyl transferase C2859_16500 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C2859_16505 PF01722 BolA-like protein C2859_16510 PF01380 SIS domain C2859_16510 PF00571 CBS domain C2859_16525 PF03968 OstA-like protein C2859_16530 PF00005 ABC transporter C2859_16535 PF04552 Sigma-54, DNA binding domain C2859_16535 PF00309 Sigma-54 factor, Activator interacting domain (AID) C2859_16535 PF04963 Sigma-54 factor, core binding domain C2859_16540 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C2859_16545 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C2859_16550 PF07475 HPr Serine kinase C-terminal domain C2859_16550 PF02603 HPr Serine kinase N terminus C2859_16555 PF03668 P-loop ATPase protein family C2859_16565 PF00381 PTS HPr component phosphorylation site C2859_16570 PF02896 PEP-utilising enzyme, TIM barrel domain C2859_16570 PF00391 PEP-utilising enzyme, mobile domain C2859_16570 PF05524 PEP-utilising enzyme, N-terminal C2859_16580 PF01769 Divalent cation transporter C2859_16580 PF03448 MgtE intracellular N domain C2859_16580 PF00571 CBS domain C2859_16585 PF00756 Putative esterase C2859_16595 PF02322 Cytochrome bd terminal oxidase subunit II C2859_16600 PF01654 Cytochrome bd terminal oxidase subunit I C2859_16610 PF00324 Amino acid permease C2859_16620 PF00544 Pectate lyase C2859_16630 PF00561 alpha/beta hydrolase fold C2859_16640 PF00196 Bacterial regulatory proteins, luxR family C2859_16645 PF00324 Amino acid permease C2859_16675 PF12706 Beta-lactamase superfamily domain C2859_16680 PF04820 Tryptophan halogenase C2859_16735 PF00376 MerR family regulatory protein C2859_16735 PF09278 MerR, DNA binding C2859_16750 PF03738 Glutathionylspermidine synthase preATP-grasp C2859_16775 PF04012 PspA/IM30 family C2859_16785 PF01243 Pyridoxamine 5'-phosphate oxidase C2859_16785 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region C2859_16790 PF01202 Shikimate kinase C2859_16795 PF01761 3-dehydroquinate synthase C2859_16805 PF01208 Uroporphyrinogen decarboxylase (URO-D) C2859_16810 PF07690 Major Facilitator Superfamily C2859_16815 PF00072 Response regulator receiver domain C2859_16815 PF00512 His Kinase A (phospho-acceptor) domain C2859_16815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_16815 PF00672 HAMP domain C2859_16815 PF17149 Periplasmic sensor domain found in signal transduction proteins C2859_16815 PF01627 Hpt domain C2859_16820 PF17149 Periplasmic sensor domain found in signal transduction proteins C2859_16820 PF01627 Hpt domain C2859_16820 PF00512 His Kinase A (phospho-acceptor) domain C2859_16820 PF00072 Response regulator receiver domain C2859_16820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_16820 PF00672 HAMP domain C2859_16830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_16830 PF00512 His Kinase A (phospho-acceptor) domain C2859_16830 PF01627 Hpt domain C2859_16830 PF00072 Response regulator receiver domain C2859_16835 PF04264 YceI-like domain C2859_16855 PF03313 Serine dehydratase alpha chain C2859_16855 PF03315 Serine dehydratase beta chain C2859_16860 PF00561 alpha/beta hydrolase fold C2859_16870 PF00742 Homoserine dehydrogenase C2859_16870 PF00696 Amino acid kinase family C2859_16870 PF03447 Homoserine dehydrogenase, NAD binding domain C2859_16875 PF01053 Cys/Met metabolism PLP-dependent enzyme C2859_16880 PF00561 alpha/beta hydrolase fold C2859_16885 PF08525 Opacity-associated protein A N-terminal motif C2859_16885 PF01551 Peptidase family M23 C2859_16885 PF01476 LysM domain C2859_16890 PF16658 Class II release factor RF3, C-terminal domain C2859_16890 PF00009 Elongation factor Tu GTP binding domain C2859_16895 PF03006 Haemolysin-III related C2859_16900 PF05170 AsmA family C2859_16905 PF00478 IMP dehydrogenase / GMP reductase domain C2859_16905 PF00571 CBS domain C2859_16910 PF00535 Glycosyl transferase family 2 C2859_16915 PF00912 Transglycosylase C2859_16920 PF01430 Hsp33 protein C2859_16930 PF00593 TonB dependent receptor C2859_16930 PF07715 TonB-dependent Receptor Plug Domain C2859_16935 PF00440 Bacterial regulatory proteins, tetR family C2859_16940 PF00561 alpha/beta hydrolase fold C2859_16945 PF09317 Domain of unknown function (DUF1974) C2859_16945 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C2859_16945 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C2859_16970 PF01597 Glycine cleavage H-protein C2859_16975 PF08669 Glycine cleavage T-protein C-terminal barrel domain C2859_16975 PF01571 Aminomethyltransferase folate-binding domain C2859_16995 PF02694 Uncharacterised BCR, YnfA/UPF0060 family C2859_17000 PF03819 MazG nucleotide pyrophosphohydrolase domain C2859_17005 PF00459 Inositol monophosphatase family C2859_17010 PF00293 NUDIX domain C2859_17015 PF00202 Aminotransferase class-III C2859_17020 PF04452 RNA methyltransferase C2859_17025 PF02685 Glucokinase C2859_17040 PF01476 LysM domain C2859_17040 PF00704 Glycosyl hydrolases family 18 C2859_17055 PF01915 Glycosyl hydrolase family 3 C-terminal domain C2859_17055 PF14310 Fibronectin type III-like domain C2859_17055 PF07691 PA14 domain C2859_17055 PF00933 Glycosyl hydrolase family 3 N terminal domain C2859_17065 PF01301 Glycosyl hydrolases family 35 C2859_17070 PF13520 Amino acid permease C2859_17080 PF11975 Family 4 glycosyl hydrolase C-terminal domain C2859_17080 PF02056 Family 4 glycosyl hydrolase C2859_17090 PF07971 Glycosyl hydrolase family 92 C2859_17090 PF17678 Glycosyl hydrolase family 92 N-terminal domain C2859_17095 PF01301 Glycosyl hydrolases family 35 C2859_17130 PF03932 CutC family C2859_17135 PF01112 Asparaginase C2859_17150 PF13302 Acetyltransferase (GNAT) domain C2859_17165 PF00072 Response regulator receiver domain C2859_17165 PF01627 Hpt domain C2859_17165 PF01584 CheW-like domain C2859_17165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_17170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2859_17170 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term C2859_17175 PF01584 CheW-like domain C2859_17180 PF00072 Response regulator receiver domain C2859_17185 PF00072 Response regulator receiver domain C2859_17190 PF02951 Prokaryotic glutathione synthetase, N-terminal domain C2859_17190 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain C2859_17200 PF03747 ADP-ribosylglycohydrolase C2859_17205 PF00814 Glycoprotease family C2859_17210 PF13307 Helicase C-terminal domain C2859_17210 PF04851 Type III restriction enzyme, res subunit C2859_17220 PF00912 Transglycosylase C2859_17220 PF00905 Penicillin binding protein transpeptidase domain C2859_17220 PF14814 Bifunctional transglycosylase second domain C2859_17225 PF00535 Glycosyl transferase family 2 C2859_17240 PF04607 Region found in RelA / SpoT proteins C2859_17240 PF13291 ACT domain C2859_17240 PF02824 TGS domain C2859_17250 PF12706 Beta-lactamase superfamily domain C2859_17255 PF03070 TENA/THI-4/PQQC family C2859_17260 PF05402 Coenzyme PQQ synthesis protein D (PqqD) C2859_17265 PF13186 Iron-sulfur cluster-binding domain C2859_17265 PF04055 Radical SAM superfamily C2859_17280 PF02685 Glucokinase C2859_17295 PF00270 DEAD/DEAH box helicase C2859_17295 PF11898 Domain of unknown function (DUF3418) C2859_17295 PF04408 Helicase associated domain (HA2) C2859_17295 PF00271 Helicase conserved C-terminal domain C2859_17295 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold C2859_17300 PF00210 Ferritin-like domain C2859_17310 PF00271 Helicase conserved C-terminal domain C2859_17310 PF00570 HRDC domain C2859_17310 PF16124 RecQ zinc-binding C2859_17310 PF09382 RQC domain C2859_17310 PF00270 DEAD/DEAH box helicase C2859_17345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2859_17345 PF00672 HAMP domain C2859_17345 PF02203 Tar ligand binding domain homologue C2859_17365 PF07536 HWE histidine kinase C2859_17365 PF13581 Histidine kinase-like ATPase domain C2859_17365 PF13426 PAS domain C2859_17370 PF06508 Queuosine biosynthesis protein QueC C2859_17380 PF04055 Radical SAM superfamily C2859_17390 PF00691 OmpA family C2859_17395 PF07676 WD40-like Beta Propeller Repeat C2859_17395 PF04052 TolB amino-terminal domain C2859_17405 PF02472 Biopolymer transport protein ExbD/TolR C2859_17410 PF01618 MotA/TolQ/ExbB proton channel family C2859_17415 PF03061 Thioesterase superfamily C2859_17420 PF05491 RuvB C-terminal winged helix domain C2859_17420 PF05496 Holliday junction DNA helicase RuvB P-loop domain C2859_17420 PF17864 RuvB AAA lid domain C2859_17430 PF02705 K+ potassium transporter C2859_17435 PF01330 RuvA N terminal domain C2859_17435 PF07499 RuvA, C-terminal domain C2859_17440 PF02075 Crossover junction endodeoxyribonuclease RuvC C2859_17445 PF01709 Transcriptional regulator C2859_17460 PF00152 tRNA synthetases class II (D, K and N) C2859_17460 PF02938 GAD domain C2859_17460 PF01336 OB-fold nucleic acid binding domain C2859_17515 PF03377 TAL effector repeat C2859_17540 PF03377 TAL effector repeat C2859_17580 PF13406 Transglycosylase SLT domain C2859_17595 PF07690 Major Facilitator Superfamily C2859_17610 PF04185 Phosphoesterase family C2859_17610 PF05506 Domain of unknown function (DUF756) C2859_17630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2859_17630 PF03466 LysR substrate binding domain C2859_17640 PF12848 ABC transporter C2859_17640 PF00005 ABC transporter C2859_17645 PF07715 TonB-dependent Receptor Plug Domain C2859_17645 PF00593 TonB dependent receptor C2859_17660 PF00593 TonB dependent receptor C2859_17660 PF07715 TonB-dependent Receptor Plug Domain C2859_17665 PF07715 TonB-dependent Receptor Plug Domain C2859_17665 PF00593 TonB dependent receptor C2859_17670 PF00067 Cytochrome P450 C2859_17680 PF02254 TrkA-N domain C2859_17680 PF00999 Sodium/hydrogen exchanger family C2859_17705 PF07715 TonB-dependent Receptor Plug Domain C2859_17705 PF07660 Secretin and TonB N terminus short domain C2859_17705 PF00593 TonB dependent receptor C2859_17715 PF06276 Ferric iron reductase FhuF-like transporter C2859_17715 PF04183 IucA / IucC family C2859_17720 PF07690 Major Facilitator Superfamily C2859_17730 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C2859_17730 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C2859_17740 PF02654 Cobalamin-5-phosphate synthase C2859_17750 PF02277 Phosphoribosyltransferase C2859_17755 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase C2859_17760 PF07685 CobB/CobQ-like glutamine amidotransferase domain C2859_17760 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C2859_17765 PF00155 Aminotransferase class I and II C2859_17770 PF03186 CobD/Cbib protein C2859_17770 PF17113 Regulatory signalling modulator protein AmpE C2859_17775 PF12557 Cob(I)alamin adenosyltransferase N terminal C2859_17775 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP C2859_17795 PF07715 TonB-dependent Receptor Plug Domain C2859_17795 PF00593 TonB dependent receptor C2859_17800 PF10431 C-terminal, D2-small domain, of ClpB protein C2859_17800 PF07724 AAA domain (Cdc48 subfamily) C2859_17800 PF00004 ATPase family associated with various cellular activities (AAA) C2859_17800 PF17871 AAA lid domain C2859_17800 PF02861 Clp amino terminal domain, pathogenicity island component C2859_17805 PF00005 ABC transporter C2859_17810 PF00528 Binding-protein-dependent transport system inner membrane component C2859_17815 PF09084 NMT1/THI5 like C2859_17820 PF00248 Aldo/keto reductase family C2859_17830 PF07715 TonB-dependent Receptor Plug Domain C2859_17830 PF00593 TonB dependent receptor C2859_17835 PF01541 GIY-YIG catalytic domain C2859_17870 PF07715 TonB-dependent Receptor Plug Domain C2859_17870 PF00593 TonB dependent receptor C2859_17880 PF02358 Trehalose-phosphatase C2859_17890 PF00982 Glycosyltransferase family 20 C2859_17895 PF01011 PQQ enzyme repeat C2859_17905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2859_17905 PF00672 HAMP domain C2859_17905 PF02203 Tar ligand binding domain homologue C2859_17910 PF04134 Protein of unknown function, DUF393 C2859_17925 PF00849 RNA pseudouridylate synthase C2859_17930 PF13525 Outer membrane lipoprotein C2859_17940 PF00795 Carbon-nitrogen hydrolase C2859_17940 PF02540 NAD synthase C2859_17950 PF00549 CoA-ligase C2859_17950 PF02629 CoA binding domain C2859_17955 PF08442 ATP-grasp domain C2859_17955 PF00549 CoA-ligase C2859_17960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_17960 PF00512 His Kinase A (phospho-acceptor) domain C2859_17965 PF00072 Response regulator receiver domain C2859_17965 PF00158 Sigma-54 interaction domain C2859_17965 PF02954 Bacterial regulatory protein, Fis family C2859_17985 PF00437 Type II/IV secretion system protein C2859_17985 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C2859_17990 PF07963 Prokaryotic N-terminal methylation motif C2859_17990 PF00114 Pilin (bacterial filament) C2859_17995 PF00482 Type II secretion system (T2SS), protein F C2859_18000 PF06750 Bacterial Peptidase A24 N-terminal domain C2859_18000 PF01478 Type IV leader peptidase family C2859_18005 PF01121 Dephospho-CoA kinase C2859_18025 PF16736 Single Cache-like C2859_18025 PF00989 PAS fold C2859_18025 PF00512 His Kinase A (phospho-acceptor) domain C2859_18025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_18030 PF00072 Response regulator receiver domain C2859_18030 PF00486 Transcriptional regulatory protein, C terminal C2859_18040 PF18030 RimK PreATP-grasp domain C2859_18040 PF08443 RimK-like ATP-grasp domain C2859_18045 PF00128 Alpha amylase, catalytic domain C2859_18045 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C2859_18165 PF05973 Phage derived protein Gp49-like (DUF891) C2859_18195 PF05593 RHS Repeat C2859_18195 PF03527 RHS protein C2859_18235 PF03797 Autotransporter beta-domain C2859_18235 PF00657 GDSL-like Lipase/Acylhydrolase C2859_18245 PF05690 Thiazole biosynthesis protein ThiG C2859_18255 PF02390 Putative methyltransferase C2859_18260 PF02080 TrkA-C domain C2859_18260 PF03600 Citrate transporter C2859_18275 PF01557 Fumarylacetoacetate (FAA) hydrolase family C2859_18280 PF01741 Large-conductance mechanosensitive channel, MscL C2859_18290 PF00356 Bacterial regulatory proteins, lacI family C2859_18295 PF02611 CDP-diacylglycerol pyrophosphatase C2859_18305 PF13018 Extended Signal Peptide of Type V secretion system C2859_18305 PF03895 YadA-like membrane anchor domain C2859_18305 PF05658 Head domain of trimeric autotransporter adhesin C2859_18305 PF05662 Coiled stalk of trimeric autotransporter adhesin C2859_18310 PF01527 Transposase C2859_18330 PF09456 RcsC Alpha-Beta-Loop (ABL) C2859_18330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_18330 PF00512 His Kinase A (phospho-acceptor) domain C2859_18330 PF00072 Response regulator receiver domain C2859_18335 PF12792 CSS motif domain associated with EAL C2859_18335 PF00563 EAL domain C2859_18350 PF01341 Glycosyl hydrolases family 6 C2859_18350 PF00041 Fibronectin type III domain C2859_18350 PF00553 Cellulose binding domain C2859_18360 PF00703 Glycosyl hydrolases family 2 C2859_18360 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain C2859_18360 PF02837 Glycosyl hydrolases family 2, sugar binding domain C2859_18365 PF10566 Glycoside hydrolase 97 C2859_18365 PF14508 Glycosyl-hydrolase 97 N-terminal C2859_18365 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation C2859_18375 PF00135 Carboxylesterase family C2859_18380 PF00588 SpoU rRNA Methylase family C2859_18380 PF08032 RNA 2'-O ribose methyltransferase substrate binding C2859_18390 PF01433 Peptidase family M1 domain C2859_18390 PF11838 ERAP1-like C-terminal domain C2859_18395 PF00873 AcrB/AcrD/AcrF family C2859_18400 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2859_18400 PF00529 HlyD membrane-fusion protein of T1SS C2859_18405 PF00009 Elongation factor Tu GTP binding domain C2859_18410 PF01507 Phosphoadenosine phosphosulfate reductase family C2859_18415 PF00175 Oxidoreductase NAD-binding domain C2859_18415 PF00258 Flavodoxin C2859_18415 PF00667 FAD binding domain C2859_18420 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C2859_18420 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C2859_18425 PF01507 Phosphoadenosine phosphosulfate reductase family C2859_18445 PF01627 Hpt domain C2859_18445 PF00072 Response regulator receiver domain C2859_18445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_18445 PF00512 His Kinase A (phospho-acceptor) domain C2859_18460 PF03466 LysR substrate binding domain C2859_18460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2859_18465 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C2859_18465 PF10414 Sirohaem synthase dimerisation region C2859_18465 PF14824 Sirohaem biosynthesis protein central C2859_18470 PF00291 Pyridoxal-phosphate dependent enzyme C2859_18480 PF01661 Macro domain C2859_18485 PF00274 Fructose-bisphosphate aldolase class-I C2859_18500 PF02887 Pyruvate kinase, alpha/beta domain C2859_18500 PF00224 Pyruvate kinase, barrel domain C2859_18510 PF00162 Phosphoglycerate kinase C2859_18535 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C2859_18535 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C2859_18545 PF03922 OmpW family C2859_18550 PF03922 OmpW family C2859_18560 PF00753 Metallo-beta-lactamase superfamily C2859_18560 PF04273 Putative phosphatase (DUF442) C2859_18570 PF00528 Binding-protein-dependent transport system inner membrane component C2859_18575 PF00005 ABC transporter C2859_18575 PF03459 TOBE domain C2859_18610 PF01476 LysM domain C2859_18610 PF03734 L,D-transpeptidase catalytic domain C2859_18615 PF04225 Opacity-associated protein A LysM-like domain C2859_18615 PF01551 Peptidase family M23 C2859_18625 PF00593 TonB dependent receptor C2859_18625 PF07715 TonB-dependent Receptor Plug Domain C2859_18630 PF12146 Serine aminopeptidase, S33 C2859_18635 PF00456 Transketolase, thiamine diphosphate binding domain C2859_18635 PF02780 Transketolase, C-terminal domain C2859_18635 PF02779 Transketolase, pyrimidine binding domain C2859_18640 PF00375 Sodium:dicarboxylate symporter family C2859_18655 PF07584 Aerotolerance regulator N-terminal C2859_18655 PF00092 von Willebrand factor type A domain C2859_18675 PF17863 AAA lid domain C2859_18675 PF07726 ATPase family associated with various cellular activities (AAA) C2859_18680 PF07660 Secretin and TonB N terminus short domain C2859_18680 PF00263 Bacterial type II and III secretion system protein C2859_18680 PF03958 Bacterial type II/III secretion system short domain C2859_18680 PF11741 AMIN domain C2859_18705 PF17092 Penicillin-binding protein OB-like domain C2859_18705 PF00905 Penicillin binding protein transpeptidase domain C2859_18705 PF00912 Transglycosylase C2859_18715 PF00285 Citrate synthase, C-terminal domain C2859_18720 PF01197 Ribosomal protein L31 C2859_18725 PF01156 Inosine-uridine preferring nucleoside hydrolase C2859_18730 PF17191 RecG wedge domain C2859_18730 PF00270 DEAD/DEAH box helicase C2859_18730 PF00271 Helicase conserved C-terminal domain C2859_18735 PF01042 Endoribonuclease L-PSP C2859_18740 PF04607 Region found in RelA / SpoT proteins C2859_18740 PF13291 ACT domain C2859_18740 PF02824 TGS domain C2859_18745 PF01192 RNA polymerase Rpb6 C2859_18750 PF00625 Guanylate kinase C2859_18755 PF03755 YicC-like family, N-terminal region C2859_18755 PF08340 Domain of unknown function (DUF1732) C2859_18760 PF03725 3' exoribonuclease family, domain 2 C2859_18760 PF01138 3' exoribonuclease family, domain 1 C2859_18770 PF01725 Ham1 family C2859_18775 PF06969 HemN C-terminal domain C2859_18775 PF04055 Radical SAM superfamily C2859_18790 PF00557 Metallopeptidase family M24 C2859_18800 PF00557 Metallopeptidase family M24 C2859_18800 PF05195 Aminopeptidase P, N-terminal domain C2859_18805 PF03695 Uncharacterised protein family (UPF0149) C2859_18815 PF05164 Cell division protein ZapA C2859_18825 PF01812 5-formyltetrahydrofolate cyclo-ligase family C2859_18835 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) C2859_18845 PF13369 Transglutaminase-like superfamily C2859_18850 PF00301 Rubredoxin C2859_18855 PF02581 Thiamine monophosphate synthase C2859_18870 PF00202 Aminotransferase class-III C2859_18875 PF17874 MalT-like TPR region C2859_18875 PF00196 Bacterial regulatory proteins, luxR family C2859_18880 PF00127 Copper binding proteins, plastocyanin/azurin family C2859_18890 PF00155 Aminotransferase class I and II C2859_18900 PF00034 Cytochrome c C2859_18900 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C2859_18905 PF01593 Flavin containing amine oxidoreductase C2859_18920 PF00202 Aminotransferase class-III C2859_18925 PF00520 Ion transport protein C2859_18925 PF00027 Cyclic nucleotide-binding domain C2859_18945 PF01569 PAP2 superfamily C2859_18950 PF01062 Bestrophin, RFP-TM, chloride channel C2859_18960 PF08245 Mur ligase middle domain C2859_18960 PF02875 Mur ligase family, glutamate ligase domain C2859_18960 PF01225 Mur ligase family, catalytic domain C2859_18970 PF00365 Phosphofructokinase C2859_18980 PF03030 Inorganic H+ pyrophosphatase C2859_18990 PF00719 Inorganic pyrophosphatase C2859_19000 PF00593 TonB dependent receptor C2859_19000 PF07715 TonB-dependent Receptor Plug Domain C2859_19005 PF12833 Helix-turn-helix domain C2859_19015 PF13667 ThiC-associated domain C2859_19015 PF01964 Radical SAM ThiC family C2859_19025 PF00593 TonB dependent receptor C2859_19025 PF07715 TonB-dependent Receptor Plug Domain C2859_19030 PF00672 HAMP domain C2859_19030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2859_19040 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain C2859_19040 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain C2859_19045 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C2859_19045 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C2859_19045 PF00205 Thiamine pyrophosphate enzyme, central domain C2859_19055 PF00291 Pyridoxal-phosphate dependent enzyme C2859_19060 PF08502 LeuA allosteric (dimerisation) domain C2859_19060 PF00682 HMGL-like C2859_19070 PF00180 Isocitrate/isopropylmalate dehydrogenase C2859_19075 PF00694 Aconitase C-terminal domain C2859_19080 PF00330 Aconitase family (aconitate hydratase) C2859_19085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2859_19090 PF00990 Diguanylate cyclase, GGDEF domain C2859_19090 PF17151 Periplasmic sensor domain C2859_19105 PF02321 Outer membrane efflux protein C2859_19110 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) C2859_19120 PF03279 Bacterial lipid A biosynthesis acyltransferase C2859_19150 PF03949 Malic enzyme, NAD binding domain C2859_19150 PF00390 Malic enzyme, N-terminal domain C2859_19150 PF01515 Phosphate acetyl/butaryl transferase C2859_19155 PF00375 Sodium:dicarboxylate symporter family C2859_19165 PF00512 His Kinase A (phospho-acceptor) domain C2859_19165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_19165 PF02743 Cache domain C2859_19170 PF07690 Major Facilitator Superfamily C2859_19180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2859_19180 PF03466 LysR substrate binding domain C2859_19185 PF00248 Aldo/keto reductase family C2859_19200 PF00072 Response regulator receiver domain C2859_19200 PF00196 Bacterial regulatory proteins, luxR family C2859_19210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_19210 PF08521 Two-component sensor kinase N-terminal C2859_19210 PF00512 His Kinase A (phospho-acceptor) domain C2859_19215 PF00486 Transcriptional regulatory protein, C terminal C2859_19215 PF00072 Response regulator receiver domain C2859_19230 PF03600 Citrate transporter C2859_19235 PF00106 short chain dehydrogenase C2859_19240 PF00356 Bacterial regulatory proteins, lacI family C2859_19255 PF00128 Alpha amylase, catalytic domain C2859_19270 PF03193 RsgA GTPase C2859_19305 PF00593 TonB dependent receptor C2859_19305 PF07715 TonB-dependent Receptor Plug Domain C2859_19310 PF01522 Polysaccharide deacetylase C2859_19315 PF00462 Glutaredoxin C2859_19330 PF01979 Amidohydrolase family C2859_19335 PF01979 Amidohydrolase family C2859_19360 PF02645 Uncharacterised protein, DegV family COG1307 C2859_19365 PF01327 Polypeptide deformylase C2859_19375 PF03960 ArsC family C2859_19395 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) C2859_19400 PF01270 Glycosyl hydrolases family 8 C2859_19405 PF03170 Bacterial cellulose synthase subunit C2859_19410 PF07238 PilZ domain C2859_19410 PF03552 Cellulose synthase C2859_19410 PF00535 Glycosyl transferase family 2 C2859_19425 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain C2859_19425 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family C2859_19470 PF07715 TonB-dependent Receptor Plug Domain C2859_19470 PF00593 TonB dependent receptor C2859_19480 PF00392 Bacterial regulatory proteins, gntR family C2859_19480 PF07702 UTRA domain C2859_19490 PF03958 Bacterial type II/III secretion system short domain C2859_19490 PF00263 Bacterial type II and III secretion system protein C2859_19500 PF10741 Type II secretion system (T2SS), protein M subtype b C2859_19505 PF05137 Fimbrial assembly protein (PilN) C2859_19510 PF03934 Type II secretion system (T2SS), protein K C2859_19520 PF07963 Prokaryotic N-terminal methylation motif C2859_19525 PF12019 Type II transport protein GspH C2859_19530 PF08334 Type II secretion system (T2SS), protein G C2859_19535 PF00482 Type II secretion system (T2SS), protein F C2859_19540 PF00437 Type II/IV secretion system protein C2859_19540 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C2859_19545 PF04151 Bacterial pre-peptidase C-terminal domain C2859_19545 PF00082 Subtilase family C2859_19550 PF13018 Extended Signal Peptide of Type V secretion system C2859_19550 PF03895 YadA-like membrane anchor domain C2859_19550 PF05658 Head domain of trimeric autotransporter adhesin C2859_19550 PF05662 Coiled stalk of trimeric autotransporter adhesin C2859_19555 PF00082 Subtilase family C2859_19555 PF04151 Bacterial pre-peptidase C-terminal domain C2859_19560 PF05662 Coiled stalk of trimeric autotransporter adhesin C2859_19560 PF03895 YadA-like membrane anchor domain C2859_19560 PF13018 Extended Signal Peptide of Type V secretion system C2859_19560 PF05658 Head domain of trimeric autotransporter adhesin C2859_19570 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain C2859_19570 PF02769 AIR synthase related protein, C-terminal domain C2859_19570 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal C2859_19585 PF10411 Disulfide bond isomerase protein N-terminus C2859_19585 PF13098 Thioredoxin-like domain C2859_19600 PF00589 Phage integrase family C2859_19600 PF02899 Phage integrase, N-terminal SAM-like domain C2859_19615 PF03739 Lipopolysaccharide export system permease LptF/LptG C2859_19625 PF00883 Cytosol aminopeptidase family, catalytic domain C2859_19625 PF02789 Cytosol aminopeptidase family, N-terminal domain C2859_19640 PF10458 Valyl tRNA synthetase tRNA binding arm C2859_19640 PF00133 tRNA synthetases class I (I, L, M and V) C2859_19640 PF08264 Anticodon-binding domain of tRNA C2859_19650 PF01464 Transglycosylase SLT domain C2859_19650 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain C2859_19670 PF01066 CDP-alcohol phosphatidyltransferase C2859_19680 PF03129 Anticodon binding domain C2859_19680 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C2859_19680 PF04073 Aminoacyl-tRNA editing domain C2859_19685 PF00816 H-NS histone family C2859_19695 PF02405 Permease MlaE C2859_19700 PF00005 ABC transporter C2859_19705 PF03886 ABC-type transport auxiliary lipoprotein component C2859_19705 PF02470 MlaD protein C2859_19725 PF01144 Coenzyme A transferase C2859_19730 PF01144 Coenzyme A transferase C2859_19735 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C2859_19735 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C2859_19735 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C2859_19735 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C2859_19740 PF01050 Mannose-6-phosphate isomerase C2859_19740 PF00483 Nucleotidyl transferase C2859_19745 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C2859_19745 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C2859_19745 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C2859_19750 PF04321 RmlD substrate binding domain C2859_19755 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase C2859_19760 PF00483 Nucleotidyl transferase C2859_19765 PF16363 GDP-mannose 4,6 dehydratase C2859_19770 PF01012 Electron transfer flavoprotein domain C2859_19775 PF01012 Electron transfer flavoprotein domain C2859_19775 PF00766 Electron transfer flavoprotein FAD-binding domain C2859_19785 PF00535 Glycosyl transferase family 2 C2859_19805 PF05050 Methyltransferase FkbM domain C2859_19810 PF16363 GDP-mannose 4,6 dehydratase C2859_19815 PF16363 GDP-mannose 4,6 dehydratase C2859_19820 PF00534 Glycosyl transferases group 1 C2859_19820 PF13477 Glycosyl transferase 4-like C2859_19825 PF00069 Protein kinase domain C2859_19825 PF13847 Methyltransferase domain C2859_19830 PF00005 ABC transporter C2859_19840 PF00534 Glycosyl transferases group 1 C2859_19840 PF13439 Glycosyltransferase Family 4 C2859_19850 PF01053 Cys/Met metabolism PLP-dependent enzyme C2859_19855 PF00571 CBS domain C2859_19855 PF00291 Pyridoxal-phosphate dependent enzyme C2859_19875 PF00437 Type II/IV secretion system protein C2859_19880 PF02798 Glutathione S-transferase, N-terminal domain C2859_19880 PF14497 Glutathione S-transferase, C-terminal domain C2859_19895 PF00270 DEAD/DEAH box helicase C2859_19895 PF00271 Helicase conserved C-terminal domain C2859_19905 PF07715 TonB-dependent Receptor Plug Domain C2859_19905 PF00593 TonB dependent receptor C2859_19915 PF01242 6-pyruvoyl tetrahydropterin synthase C2859_19935 PF13185 GAF domain C2859_19945 PF00756 Putative esterase C2859_19950 PF00593 TonB dependent receptor C2859_19950 PF07715 TonB-dependent Receptor Plug Domain C2859_19955 PF13419 Haloacid dehalogenase-like hydrolase C2859_19960 PF11799 impB/mucB/samB family C-terminal domain C2859_19960 PF00817 impB/mucB/samB family C2859_19965 PF07977 FabA-like domain C2859_19970 PF02801 Beta-ketoacyl synthase, C-terminal domain C2859_19970 PF00109 Beta-ketoacyl synthase, N-terminal domain C2859_19980 PF01432 Peptidase family M3 C2859_19995 PF00394 Multicopper oxidase C2859_19995 PF07732 Multicopper oxidase C2859_19995 PF07731 Multicopper oxidase C2859_20000 PF05275 Copper resistance protein B precursor (CopB) C2859_20005 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C2859_20035 PF01380 SIS domain C2859_20040 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2859_20045 PF02687 FtsX-like permease family C2859_20045 PF00005 ABC transporter C2859_20045 PF12704 MacB-like periplasmic core domain C2859_20050 PF12704 MacB-like periplasmic core domain C2859_20050 PF02687 FtsX-like permease family C2859_20055 PF12704 MacB-like periplasmic core domain C2859_20055 PF00005 ABC transporter C2859_20055 PF02687 FtsX-like permease family C2859_20065 PF02954 Bacterial regulatory protein, Fis family C2859_20065 PF00158 Sigma-54 interaction domain C2859_20065 PF00072 Response regulator receiver domain C2859_20070 PF00512 His Kinase A (phospho-acceptor) domain C2859_20070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_20075 PF00132 Bacterial transferase hexapeptide (six repeats) C2859_20075 PF14602 Hexapeptide repeat of succinyl-transferase C2859_20075 PF12804 MobA-like NTP transferase domain C2859_20090 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain C2859_20090 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain C2859_20095 PF02874 ATP synthase alpha/beta family, beta-barrel domain C2859_20095 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C2859_20100 PF00231 ATP synthase C2859_20105 PF00306 ATP synthase alpha/beta chain, C terminal domain C2859_20105 PF02874 ATP synthase alpha/beta family, beta-barrel domain C2859_20105 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C2859_20110 PF00213 ATP synthase delta (OSCP) subunit C2859_20115 PF00430 ATP synthase B/B' CF(0) C2859_20120 PF00137 ATP synthase subunit C C2859_20125 PF00119 ATP synthase A chain C2859_20145 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C2859_20145 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2859_20155 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C2859_20155 PF00364 Biotin-requiring enzyme C2859_20155 PF02817 e3 binding domain C2859_20190 PF03180 NLPA lipoprotein C2859_20195 PF00528 Binding-protein-dependent transport system inner membrane component C2859_20200 PF09383 NIL domain C2859_20200 PF00005 ABC transporter C2859_20205 PF00892 EamA-like transporter family C2859_20210 PF04461 Protein of unknown function (DUF520) C2859_20220 PF00072 Response regulator receiver domain C2859_20220 PF00989 PAS fold C2859_20220 PF01627 Hpt domain C2859_20220 PF00512 His Kinase A (phospho-acceptor) domain C2859_20220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_20220 PF18415 Histidine kinase receptor ArcB trans-membrane domain C2859_20245 PF13419 Haloacid dehalogenase-like hydrolase C2859_20250 PF01479 S4 domain C2859_20250 PF00849 RNA pseudouridylate synthase C2859_20255 PF05175 Methyltransferase small domain C2859_20255 PF08468 Methyltransferase small domain N-terminal C2859_20265 PF07995 Glucose / Sorbosone dehydrogenase C2859_20275 PF00989 PAS fold C2859_20275 PF00512 His Kinase A (phospho-acceptor) domain C2859_20275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_20295 PF01168 Alanine racemase, N-terminal domain C2859_20295 PF00842 Alanine racemase, C-terminal domain C2859_20300 PF01266 FAD dependent oxidoreductase C2859_20305 PF01037 Lrp/AsnC ligand binding domain C2859_20320 PF01641 SelR domain C2859_20330 PF01618 MotA/TolQ/ExbB proton channel family C2859_20335 PF13677 Membrane MotB of proton-channel complex MotA/MotB C2859_20335 PF00691 OmpA family C2859_20360 PF01061 ABC-2 type transporter C2859_20365 PF00005 ABC transporter C2859_20370 PF00999 Sodium/hydrogen exchanger family C2859_20380 PF02469 Fasciclin domain C2859_20385 PF03167 Uracil DNA glycosylase superfamily C2859_20395 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase C2859_20405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2859_20405 PF03466 LysR substrate binding domain C2859_20410 PF03358 NADPH-dependent FMN reductase C2859_20415 PF00248 Aldo/keto reductase family C2859_20430 PF05649 Peptidase family M13 C2859_20430 PF01431 Peptidase family M13 C2859_20450 PF13520 Amino acid permease C2859_20460 PF04397 LytTr DNA-binding domain C2859_20460 PF00072 Response regulator receiver domain C2859_20465 PF06580 Histidine kinase C2859_20465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_20465 PF00672 HAMP domain C2859_20465 PF02743 Cache domain C2859_20490 PF05974 Domain of unknown function (DUF892) C2859_20495 PF05067 Manganese containing catalase C2859_20515 PF08448 PAS fold C2859_20515 PF01739 CheR methyltransferase, SAM binding domain C2859_20515 PF03705 CheR methyltransferase, all-alpha domain C2859_20515 PF01339 CheB methylesterase C2859_20530 PF00072 Response regulator receiver domain C2859_20530 PF02954 Bacterial regulatory protein, Fis family C2859_20530 PF00158 Sigma-54 interaction domain C2859_20545 PF01654 Cytochrome bd terminal oxidase subunit I C2859_20550 PF02322 Cytochrome bd terminal oxidase subunit II C2859_20570 PF16363 GDP-mannose 4,6 dehydratase C2859_20580 PF03275 UDP-galactopyranose mutase C2859_20590 PF00664 ABC transporter transmembrane region C2859_20590 PF00005 ABC transporter C2859_20605 PF00107 Zinc-binding dehydrogenase C2859_20605 PF08240 Alcohol dehydrogenase GroES-like domain C2859_20605 PF13823 Alcohol dehydrogenase GroES-associated C2859_20650 PF07715 TonB-dependent Receptor Plug Domain C2859_20650 PF00593 TonB dependent receptor C2859_20665 PF00005 ABC transporter C2859_20675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2859_20675 PF03466 LysR substrate binding domain C2859_20680 PF01042 Endoribonuclease L-PSP C2859_20695 PF00672 HAMP domain C2859_20695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2859_20710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2859_20710 PF03466 LysR substrate binding domain C2859_20715 PF02525 Flavodoxin-like fold C2859_20760 PF00557 Metallopeptidase family M24 C2859_20860 PF00589 Phage integrase family C2859_20860 PF13356 Arm DNA-binding domain C2859_20880 PF01555 DNA methylase C2859_20935 PF00182 Chitinase class I C2859_21140 PF00140 Sigma-70 factor, region 1.2 C2859_21140 PF04542 Sigma-70 region 2 C2859_21140 PF04539 Sigma-70 region 3 C2859_21140 PF04545 Sigma-70, region 4 C2859_21140 PF04546 Sigma-70, non-essential region C2859_21140 PF03979 Sigma-70 factor, region 1.1 C2859_21145 PF02580 D-Tyr-tRNA(Tyr) deacylase C2859_21150 PF03279 Bacterial lipid A biosynthesis acyltransferase C2859_21170 PF00925 GTP cyclohydrolase II C2859_21190 PF00535 Glycosyl transferase family 2 C2859_21205 PF01029 NusB family C2859_21205 PF01189 16S rRNA methyltransferase RsmB/F C2859_21210 PF02911 Formyl transferase, C-terminal domain C2859_21210 PF00551 Formyl transferase C2859_21215 PF01327 Polypeptide deformylase C2859_21220 PF01476 LysM domain C2859_21225 PF02481 DNA recombination-mediator protein A C2859_21225 PF17782 DprA winged helix domain C2859_21230 PF04361 Protein of unknown function (DUF494) C2859_21245 PF01131 DNA topoisomerase C2859_21245 PF01751 Toprim domain C2859_21245 PF13368 Topoisomerase C-terminal repeat C2859_21250 PF01300 Telomere recombination C2859_21275 PF01343 Peptidase family S49 C2859_21280 PF01554 MatE C2859_21300 PF00270 DEAD/DEAH box helicase C2859_21300 PF18319 PriA DNA helicase Cys-rich region (CRR) domain C2859_21300 PF18074 Primosomal protein N C-terminal domain C2859_21300 PF17764 3′ DNA-binding domain (3′BD) C2859_21300 PF00271 Helicase conserved C-terminal domain C2859_21305 PF00043 Glutathione S-transferase, C-terminal domain C2859_21305 PF13417 Glutathione S-transferase, N-terminal domain C2859_21320 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2859_21325 PF03458 UPF0126 domain C2859_21330 PF04545 Sigma-70, region 4 C2859_21330 PF04542 Sigma-70 region 2 C2859_21335 PF03167 Uracil DNA glycosylase superfamily C2859_21340 PF00072 Response regulator receiver domain C2859_21345 PF18075 FtsX extracellular domain C2859_21350 PF00005 ABC transporter C2859_21355 PF00270 DEAD/DEAH box helicase C2859_21355 PF12300 ATP-dependent RNA helicase RhlB C2859_21355 PF00271 Helicase conserved C-terminal domain C2859_21360 PF00085 Thioredoxin C2859_21365 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C2859_21365 PF07498 Rho termination factor, N-terminal domain C2859_21365 PF07497 Rho termination factor, RNA-binding domain C2859_21370 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) C2859_21375 PF03466 LysR substrate binding domain C2859_21375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2859_21385 PF03971 Monomeric isocitrate dehydrogenase C2859_21395 PF04972 BON domain C2859_21395 PF01476 LysM domain C2859_21400 PF14489 QueF-like protein C2859_21400 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term C2859_21405 PF07687 Peptidase dimerisation domain C2859_21405 PF01546 Peptidase family M20/M25/M40 C2859_21410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2859_21415 PF00873 AcrB/AcrD/AcrF family C2859_21420 PF00873 AcrB/AcrD/AcrF family C2859_21425 PF07063 Domain of unknown function (DUF1338) C2859_21470 PF01427 D-ala-D-ala dipeptidase C2859_21475 PF01510 N-acetylmuramoyl-L-alanine amidase C2859_21485 PF13378 Enolase C-terminal domain-like C2859_21485 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C2859_21495 PF13520 Amino acid permease C2859_21510 PF05360 yiaA/B two helix domain C2859_21520 PF01915 Glycosyl hydrolase family 3 C-terminal domain C2859_21520 PF00933 Glycosyl hydrolase family 3 N terminal domain C2859_21520 PF14310 Fibronectin type III-like domain C2859_21525 PF02152 Dihydroneopterin aldolase C2859_21530 PF00814 Glycoprotease family C2859_21535 PF01165 Ribosomal protein S21 C2859_21540 PF09424 Yqey-like protein C2859_21550 PF03631 Virulence factor BrkB C2859_21555 PF08275 DNA primase catalytic core, N-terminal domain C2859_21555 PF01807 CHC2 zinc finger C2859_21555 PF08278 DNA primase DnaG DnaB-binding C2859_21555 PF10410 DnaB-helicase binding domain of primase C2859_21560 PF13593 SBF-like CPA transporter family (DUF4137) C2859_21570 PF01040 UbiA prenyltransferase family C2859_21595 PF00510 Cytochrome c oxidase subunit III C2859_21600 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 C2859_21610 PF00115 Cytochrome C and Quinol oxidase polypeptide I C2859_21615 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C2859_21615 PF02790 Cytochrome C oxidase subunit II, transmembrane domain C2859_21625 PF14850 DNA-binding domain of Proline dehydrogenase C2859_21625 PF18327 Proline utilization A proline dehydrogenase N-terminal domain C2859_21625 PF00171 Aldehyde dehydrogenase family C2859_21625 PF01619 Proline dehydrogenase C2859_21660 PF00579 tRNA synthetases class I (W and Y) C2859_21665 PF04225 Opacity-associated protein A LysM-like domain C2859_21665 PF01551 Peptidase family M23 C2859_21670 PF03702 Anhydro-N-acetylmuramic acid kinase C2859_21680 PF07690 Major Facilitator Superfamily C2859_21685 PF03372 Endonuclease/Exonuclease/phosphatase family C2859_21690 PF00156 Phosphoribosyl transferase domain C2859_21700 PF13614 AAA domain C2859_21705 PF02195 ParB-like nuclease domain C2859_21705 PF17762 HTH domain found in ParB protein C2859_21720 PF01370 NAD dependent epimerase/dehydratase family C2859_21725 PF00535 Glycosyl transferase family 2 C2859_21740 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C2859_21740 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C2859_21740 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C2859_21740 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C2859_21745 PF00692 dUTPase C2859_21750 PF02441 Flavoprotein C2859_21750 PF04127 DNA / pantothenate metabolism flavoprotein C2859_21755 PF04002 RadC-like JAB domain C2859_21760 PF03485 Arginyl tRNA synthetase N terminal domain C2859_21760 PF00750 tRNA synthetases class I (R) C2859_21760 PF05746 DALR anticodon binding domain C2859_21775 PF00106 short chain dehydrogenase C2859_21785 PF03033 Glycosyltransferase family 28 N-terminal domain C2859_21790 PF00975 Thioesterase domain C2859_21790 PF00501 AMP-binding enzyme C2859_21790 PF00550 Phosphopantetheine attachment site C2859_21790 PF00668 Condensation domain C2859_21790 PF13193 AMP-binding enzyme C-terminal domain C2859_21795 PF17944 Arginine decarboxylase C-terminal helical extension C2859_21795 PF17810 Arginine decarboxylase helical bundle domain C2859_21795 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C2859_21800 PF17284 Spermidine synthase tetramerisation domain C2859_21825 PF07555 beta-N-acetylglucosaminidase C2859_21825 PF02838 Glycosyl hydrolase family 20, domain 2 C2859_21825 PF00754 F5/8 type C domain C2859_21825 PF00041 Fibronectin type III domain C2859_21825 PF00963 Cohesin domain C2859_21835 PF00543 Nitrogen regulatory protein P-II C2859_21840 PF04380 Membrane fusogenic activity C2859_21845 PF01078 Magnesium chelatase, subunit ChlI C2859_21845 PF13335 Magnesium chelatase, subunit ChlI C-terminal C2859_21860 PF00563 EAL domain C2859_21860 PF12792 CSS motif domain associated with EAL C2859_21865 PF00487 Fatty acid desaturase C2859_21870 PF00970 Oxidoreductase FAD-binding domain C2859_21870 PF00111 2Fe-2S iron-sulfur cluster binding domain C2859_21870 PF00175 Oxidoreductase NAD-binding domain C2859_21875 PF00440 Bacterial regulatory proteins, tetR family C2859_21895 PF01139 tRNA-splicing ligase RtcB C2859_21930 PF08338 Domain of unknown function (DUF1731) C2859_21930 PF01370 NAD dependent epimerase/dehydratase family C2859_21935 PF00486 Transcriptional regulatory protein, C terminal C2859_21935 PF00072 Response regulator receiver domain C2859_21940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_21940 PF00512 His Kinase A (phospho-acceptor) domain C2859_21940 PF08521 Two-component sensor kinase N-terminal C2859_21970 PF00595 PDZ domain C2859_21990 PF01594 AI-2E family transporter C2859_21995 PF13419 Haloacid dehalogenase-like hydrolase C2859_22000 PF00883 Cytosol aminopeptidase family, catalytic domain C2859_22000 PF02789 Cytosol aminopeptidase family, N-terminal domain C2859_22010 PF08281 Sigma-70, region 4 C2859_22010 PF04542 Sigma-70 region 2 C2859_22015 PF00199 Catalase C2859_22030 PF00196 Bacterial regulatory proteins, luxR family C2859_22030 PF00072 Response regulator receiver domain C2859_22035 PF07730 Histidine kinase C2859_22040 PF13533 Biotin-lipoyl like C2859_22045 PF00005 ABC transporter C2859_22065 PF00892 EamA-like transporter family C2859_22070 PF00892 EamA-like transporter family C2859_22090 PF00753 Metallo-beta-lactamase superfamily C2859_22095 PF00579 tRNA synthetases class I (W and Y) C2859_22100 PF05532 CsbD-like C2859_22115 PF00491 Arginase family C2859_22145 PF02223 Thymidylate kinase C2859_22180 PF03309 Type III pantothenate kinase C2859_22185 PF08279 HTH domain C2859_22185 PF02237 Biotin protein ligase C terminal domain C2859_22185 PF03099 Biotin/lipoate A/B protein ligase family C2859_22200 PF06167 Glucose-regulated metallo-peptidase M90 C2859_22215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_22215 PF00512 His Kinase A (phospho-acceptor) domain C2859_22215 PF00672 HAMP domain C2859_22220 PF00486 Transcriptional regulatory protein, C terminal C2859_22220 PF00072 Response regulator receiver domain C2859_22230 PF01207 Dihydrouridine synthase (Dus) C2859_22250 PF00199 Catalase C2859_22250 PF06628 Catalase-related immune-responsive C2859_22260 PF06733 DEAD_2 C2859_22260 PF13307 Helicase C-terminal domain C2859_22275 PF08501 Shikimate dehydrogenase substrate binding domain C2859_22275 PF01488 Shikimate / quinate 5-dehydrogenase C2859_22275 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C2859_22285 PF00175 Oxidoreductase NAD-binding domain C2859_22285 PF00258 Flavodoxin C2859_22285 PF00667 FAD binding domain C2859_22295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2859_22295 PF03466 LysR substrate binding domain C2859_22310 PF00490 Delta-aminolevulinic acid dehydratase C2859_22330 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region C2859_22330 PF00326 Prolyl oligopeptidase family C2859_22335 PF02798 Glutathione S-transferase, N-terminal domain C2859_22335 PF00043 Glutathione S-transferase, C-terminal domain C2859_22360 PF04820 Tryptophan halogenase C2859_22375 PF00005 ABC transporter C2859_22385 PF01381 Helix-turn-helix C2859_22395 PF01229 Glycosyl hydrolases family 39 C2859_22400 PF02583 Metal-sensitive transcriptional repressor C2859_22405 PF16916 Dimerisation domain of Zinc Transporter C2859_22405 PF01545 Cation efflux family C2859_22415 PF00593 TonB dependent receptor C2859_22415 PF07715 TonB-dependent Receptor Plug Domain C2859_22425 PF12833 Helix-turn-helix domain C2859_22425 PF01965 DJ-1/PfpI family C2859_22430 PF00175 Oxidoreductase NAD-binding domain C2859_22430 PF00111 2Fe-2S iron-sulfur cluster binding domain C2859_22430 PF00970 Oxidoreductase FAD-binding domain C2859_22435 PF00005 ABC transporter C2859_22440 PF01061 ABC-2 type transporter C2859_22450 PF08546 Ketopantoate reductase PanE/ApbA C terminal C2859_22450 PF02558 Ketopantoate reductase PanE/ApbA C2859_22485 PF00268 Ribonucleotide reductase, small chain C2859_22495 PF03477 ATP cone domain C2859_22495 PF02867 Ribonucleotide reductase, barrel domain C2859_22495 PF00317 Ribonucleotide reductase, all-alpha domain C2859_22510 PF00583 Acetyltransferase (GNAT) family C2859_22510 PF13380 CoA binding domain C2859_22510 PF13607 Succinyl-CoA ligase like flavodoxin domain C2859_22515 PF03448 MgtE intracellular N domain C2859_22515 PF01769 Divalent cation transporter C2859_22515 PF00571 CBS domain C2859_22530 PF02254 TrkA-N domain C2859_22530 PF00999 Sodium/hydrogen exchanger family C2859_22535 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain C2859_22535 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain C2859_22540 PF00723 Glycosyl hydrolases family 15 C2859_22555 PF05166 YcgL domain C2859_22560 PF00109 Beta-ketoacyl synthase, N-terminal domain C2859_22560 PF02801 Beta-ketoacyl synthase, C-terminal domain C2859_22570 PF00535 Glycosyl transferase family 2 C2859_22615 PF07977 FabA-like domain C2859_22620 PF01553 Acyltransferase C2859_22630 PF00550 Phosphopantetheine attachment site C2859_22635 PF04820 Tryptophan halogenase C2859_22660 PF07676 WD40-like Beta Propeller Repeat C2859_22660 PF00326 Prolyl oligopeptidase family C2859_22680 PF01218 Coproporphyrinogen III oxidase C2859_22690 PF01367 5'-3' exonuclease, C-terminal SAM fold C2859_22690 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C2859_22690 PF00476 DNA polymerase family A C2859_22690 PF01612 3'-5' exonuclease C2859_22720 PF03793 PASTA domain C2859_22720 PF00069 Protein kinase domain C2859_22760 PF04717 Type VI secretion system, phage-baseplate injector C2859_22775 PF03793 PASTA domain C2859_22775 PF00069 Protein kinase domain C2859_22785 PF08281 Sigma-70, region 4 C2859_22785 PF04542 Sigma-70 region 2 C2859_22805 PF00328 Histidine phosphatase superfamily (branch 2) C2859_22850 PF00004 ATPase family associated with various cellular activities (AAA) C2859_22850 PF07724 AAA domain (Cdc48 subfamily) C2859_22850 PF17871 AAA lid domain C2859_22850 PF10431 C-terminal, D2-small domain, of ClpB protein C2859_22875 PF05638 Type VI secretion system effector, Hcp C2859_22900 PF12464 Maltose acetyltransferase C2859_22900 PF14602 Hexapeptide repeat of succinyl-transferase C2859_22905 PF13361 UvrD-like helicase C-terminal domain C2859_22905 PF00580 UvrD/REP helicase N-terminal domain C2859_22920 PF13091 PLD-like domain C2859_22920 PF13396 Phospholipase_D-nuclease N-terminal C2859_22925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2859_22925 PF03466 LysR substrate binding domain C2859_22930 PF03737 Aldolase/RraA C2859_22935 PF04303 PrpF protein C2859_22945 PF04909 Amidohydrolase C2859_22950 PF00471 Ribosomal protein L33 C2859_22955 PF00830 Ribosomal L28 family C2859_22960 PF00873 AcrB/AcrD/AcrF family C2859_22970 PF13533 Biotin-lipoyl like C2859_22990 PF02527 rRNA small subunit methyltransferase G C2859_22995 PF16655 PhoD-like phosphatase, N-terminal domain C2859_22995 PF09423 PhoD-like phosphatase C2859_23000 PF09423 PhoD-like phosphatase C2859_23000 PF16655 PhoD-like phosphatase, N-terminal domain C2859_23005 PF01648 4'-phosphopantetheinyl transferase superfamily C2859_23010 PF04226 Transglycosylase associated protein C2859_23020 PF03372 Endonuclease/Exonuclease/phosphatase family C2859_23025 PF00480 ROK family C2859_23035 PF09312 SurA N-terminal domain C2859_23035 PF00639 PPIC-type PPIASE domain C2859_23045 PF00474 Sodium:solute symporter family C2859_23050 PF04341 Protein of unknown function, DUF485 C2859_23060 PF00501 AMP-binding enzyme C2859_23060 PF16177 Acetyl-coenzyme A synthetase N-terminus C2859_23060 PF13193 AMP-binding enzyme C-terminal domain C2859_23065 PF00196 Bacterial regulatory proteins, luxR family C2859_23065 PF00072 Response regulator receiver domain C2859_23090 PF04616 Glycosyl hydrolases family 43 C2859_23090 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain C2859_23100 PF00248 Aldo/keto reductase family C2859_23115 PF01557 Fumarylacetoacetate (FAA) hydrolase family C2859_23125 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C2859_23125 PF13378 Enolase C-terminal domain-like C2859_23130 PF05336 L-rhamnose mutarotase C2859_23135 PF07690 Major Facilitator Superfamily C2859_23140 PF01614 Bacterial transcriptional regulator C2859_23140 PF09339 IclR helix-turn-helix domain C2859_23145 PF02659 Putative manganese efflux pump C2859_23150 PF00512 His Kinase A (phospho-acceptor) domain C2859_23150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_23165 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain C2859_23165 PF06165 Glycosyltransferase family 36 C2859_23185 PF13360 PQQ-like domain C2859_23185 PF13570 PQQ-like domain C2859_23185 PF01011 PQQ enzyme repeat C2859_23205 PF04357 TamB, inner membrane protein subunit of TAM complex C2859_23210 PF17243 POTRA domain TamA domain 1 C2859_23210 PF01103 Surface antigen C2859_23230 PF03412 Peptidase C39 family C2859_23230 PF00664 ABC transporter transmembrane region C2859_23230 PF00005 ABC transporter C2859_23235 PF02092 Glycyl-tRNA synthetase beta subunit C2859_23235 PF05746 DALR anticodon binding domain C2859_23240 PF02091 Glycyl-tRNA synthetase alpha subunit C2859_23245 PF00437 Type II/IV secretion system protein C2859_23245 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C2859_23265 PF00958 GMP synthase C terminal domain C2859_23265 PF00117 Glutamine amidotransferase class-I C2859_23275 PF00902 Sec-independent protein translocase protein (TatC) C2859_23280 PF02416 mttA/Hcf106 family C2859_23285 PF02416 mttA/Hcf106 family C2859_23295 PF00762 Ferrochelatase C2859_23300 PF12697 Alpha/beta hydrolase family C2859_23320 PF04381 Putative exonuclease, RdgC C2859_23325 PF01171 PP-loop family C2859_23340 PF00356 Bacterial regulatory proteins, lacI family C2859_23345 PF07477 Glycosyl hydrolase family 67 C-terminus C2859_23345 PF07488 Glycosyl hydrolase family 67 middle domain C2859_23345 PF03648 Glycosyl hydrolase family 67 N-terminus C2859_23355 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C2859_23355 PF13378 Enolase C-terminal domain-like C2859_23360 PF04616 Glycosyl hydrolases family 43 C2859_23360 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain C2859_23365 PF01915 Glycosyl hydrolase family 3 C-terminal domain C2859_23365 PF14310 Fibronectin type III-like domain C2859_23365 PF00933 Glycosyl hydrolase family 3 N terminal domain C2859_23365 PF07691 PA14 domain C2859_23370 PF01232 Mannitol dehydrogenase Rossmann domain C2859_23370 PF08125 Mannitol dehydrogenase C-terminal domain C2859_23405 PF00171 Aldehyde dehydrogenase family C2859_23420 PF00202 Aminotransferase class-III C2859_23430 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C2859_23430 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C2859_23450 PF08450 SMP-30/Gluconolactonase/LRE-like region C2859_23455 PF00331 Glycosyl hydrolase family 10 C2859_23460 PF16355 Domain of unknown function (DUF4982) C2859_23460 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 C2859_23460 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C2859_23460 PF00703 Glycosyl hydrolases family 2 C2859_23460 PF02837 Glycosyl hydrolases family 2, sugar binding domain C2859_23465 PF02614 Glucuronate isomerase C2859_23470 PF00331 Glycosyl hydrolase family 10 C2859_23470 PF03422 Carbohydrate binding module (family 6) C2859_23470 PF00553 Cellulose binding domain C2859_23480 PF03422 Carbohydrate binding module (family 6) C2859_23480 PF00331 Glycosyl hydrolase family 10 C2859_23480 PF00553 Cellulose binding domain C2859_23500 PF04616 Glycosyl hydrolases family 43 C2859_23530 PF14765 Polyketide synthase dehydratase C2859_23530 PF16197 Ketoacyl-synthetase C-terminal extension C2859_23530 PF00698 Acyl transferase domain C2859_23530 PF00550 Phosphopantetheine attachment site C2859_23530 PF08240 Alcohol dehydrogenase GroES-like domain C2859_23530 PF00109 Beta-ketoacyl synthase, N-terminal domain C2859_23530 PF02801 Beta-ketoacyl synthase, C-terminal domain C2859_23530 PF00107 Zinc-binding dehydrogenase C2859_23530 PF08659 KR domain C2859_23535 PF01553 Acyltransferase C2859_23550 PF00356 Bacterial regulatory proteins, lacI family C2859_23565 PF04820 Tryptophan halogenase C2859_23570 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family C2859_23575 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) C2859_23585 PF04337 Protein of unknown function, DUF480 C2859_23595 PF13302 Acetyltransferase (GNAT) domain C2859_23600 PF00580 UvrD/REP helicase N-terminal domain C2859_23600 PF13361 UvrD-like helicase C-terminal domain C2859_23605 PF00265 Thymidine kinase C2859_23610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2859_23610 PF08446 PAS fold C2859_23610 PF00360 Phytochrome region C2859_23610 PF01590 GAF domain C2859_23610 PF00512 His Kinase A (phospho-acceptor) domain C2859_23615 PF04349 Periplasmic glucan biosynthesis protein, MdoG C2859_23625 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain C2859_23625 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain C2859_23625 PF06827 Zinc finger found in FPG and IleRS C2859_23655 PF03594 Benzoate membrane transport protein C2859_23660 PF01590 GAF domain C2859_23660 PF08446 PAS fold C2859_23660 PF13426 PAS domain C2859_23660 PF00360 Phytochrome region C2859_23665 PF01126 Heme oxygenase C2859_23670 PF07690 Major Facilitator Superfamily C2859_23675 PF01263 Aldose 1-epimerase C2859_23685 PF02810 SEC-C motif C2859_23690 PF01925 Sulfite exporter TauE/SafE C2859_23710 PF01227 GTP cyclohydrolase I C2859_23720 PF07869 Protein of unknown function (DUF1656) C2859_23725 PF00529 HlyD membrane-fusion protein of T1SS C2859_23725 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2859_23730 PF02321 Outer membrane efflux protein C2859_23735 PF04632 Fusaric acid resistance protein family C2859_23740 PF00083 Sugar (and other) transporter C2859_23750 PF13396 Phospholipase_D-nuclease N-terminal C2859_23750 PF13091 PLD-like domain C2859_23775 PF01850 PIN domain C2859_23800 PF00849 RNA pseudouridylate synthase C2859_23815 PF00289 Biotin carboxylase, N-terminal domain C2859_23815 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C2859_23815 PF02785 Biotin carboxylase C-terminal domain C2859_23820 PF01425 Amidase C2859_23850 PF13538 UvrD-like helicase C-terminal domain C2859_23855 PF13361 UvrD-like helicase C-terminal domain C2859_23855 PF00580 UvrD/REP helicase N-terminal domain C2859_23855 PF12705 PD-(D/E)XK nuclease superfamily C2859_23860 PF17946 RecC C-terminal domain C2859_23875 PF00005 ABC transporter C2859_23880 PF02405 Permease MlaE C2859_23885 PF02470 MlaD protein C2859_23890 PF05494 MlaC protein C2859_23900 PF04333 MlaA lipoprotein C2859_23910 PF00255 Glutathione peroxidase C2859_23920 PF02646 RmuC family C2859_23925 PF00107 Zinc-binding dehydrogenase C2859_23925 PF08240 Alcohol dehydrogenase GroES-like domain C2859_23930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2859_23930 PF03466 LysR substrate binding domain C2859_23945 PF00043 Glutathione S-transferase, C-terminal domain C2859_23945 PF13417 Glutathione S-transferase, N-terminal domain C2859_23955 PF13520 Amino acid permease C2859_23960 PF17678 Glycosyl hydrolase family 92 N-terminal domain C2859_23960 PF07971 Glycosyl hydrolase family 92 C2859_23970 PF10947 Protein of unknown function (DUF2628) C2859_23975 PF00990 Diguanylate cyclase, GGDEF domain C2859_23980 PF17853 GGDEF-like domain C2859_23980 PF13556 PucR C-terminal helix-turn-helix domain C2859_23980 PF05651 Putative sugar diacid recognition C2859_23985 PF02595 Glycerate kinase family C2859_23990 PF07690 Major Facilitator Superfamily C2859_24005 PF17785 PUA-like domain C2859_24005 PF10672 S-adenosylmethionine-dependent methyltransferase C2859_24015 PF03741 Integral membrane protein TerC family C2859_24025 PF01694 Rhomboid family C2859_24030 PF03009 Glycerophosphoryl diester phosphodiesterase family C2859_24040 PF01569 PAP2 superfamily C2859_24045 PF01926 50S ribosome-binding GTPase C2859_24045 PF12631 MnmE helical domain C2859_24045 PF10396 GTP-binding protein TrmE N-terminus C2859_24050 PF01522 Polysaccharide deacetylase C2859_24055 PF14849 YidC periplasmic domain C2859_24055 PF02096 60Kd inner membrane protein C2859_24060 PF00825 Ribonuclease P C2859_24065 PF00468 Ribosomal protein L34 C2859_24070 PF03377 TAL effector repeat C2859_24095 PF02796 Helix-turn-helix domain of resolvase C2859_24095 PF00239 Resolvase, N terminal domain C2859_24105 PF13180 PDZ domain C2859_24115 PF07015 VirC1 protein C2859_24120 PF00239 Resolvase, N terminal domain C2859_24120 PF02796 Helix-turn-helix domain of resolvase C2859_24135 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system C2859_24145 PF03432 Relaxase/Mobilisation nuclease domain C2859_24155 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain