locus-tag class description LMJ37_00025 PF00849 RNA pseudouridylate synthase LMJ37_00035 PF00155 Aminotransferase class I and II LMJ37_00045 PF00528 Binding-protein-dependent transport system inner membrane component LMJ37_00050 PF00528 Binding-protein-dependent transport system inner membrane component LMJ37_00065 PF08240 Alcohol dehydrogenase GroES-like domain LMJ37_00065 PF00107 Zinc-binding dehydrogenase LMJ37_00110 PF00156 Phosphoribosyl transferase domain LMJ37_00115 PF04305 Protein of unknown function (DUF455) LMJ37_00135 PF00149 Calcineurin-like phosphoesterase LMJ37_00140 PF01569 PAP2 superfamily LMJ37_00150 PF02541 Ppx/GppA phosphatase family LMJ37_00155 PF13089 Polyphosphate kinase N-terminal domain LMJ37_00155 PF17941 Polyphosphate kinase C-terminal domain 1 LMJ37_00155 PF13090 Polyphosphate kinase C-terminal domain 2 LMJ37_00155 PF02503 Polyphosphate kinase middle domain LMJ37_00160 PF11808 Phosphate regulon sensor protein PhoR LMJ37_00160 PF00989 PAS fold LMJ37_00160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_00160 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_00175 PF00462 Glutaredoxin LMJ37_00185 PF00180 Isocitrate/isopropylmalate dehydrogenase LMJ37_00445 PF01555 DNA methylase LMJ37_00480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_00480 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_00480 PF00989 PAS fold LMJ37_00495 PF05697 Bacterial trigger factor protein (TF) LMJ37_00495 PF05698 Bacterial trigger factor protein (TF) C-terminus LMJ37_00500 PF00574 Clp protease LMJ37_00505 PF07724 AAA domain (Cdc48 subfamily) LMJ37_00505 PF10431 C-terminal, D2-small domain, of ClpB protein LMJ37_00505 PF06689 ClpX C4-type zinc finger LMJ37_00510 PF05362 Lon protease (S16) C-terminal proteolytic domain LMJ37_00510 PF00004 ATPase family associated with various cellular activities (AAA) LMJ37_00510 PF02190 ATP-dependent protease La (LON) substrate-binding domain LMJ37_00515 PF00216 Bacterial DNA-binding protein LMJ37_00540 PF05257 CHAP domain LMJ37_00540 PF01476 LysM domain LMJ37_00545 PF16123 Hydroxyacylglutathione hydrolase C-terminus LMJ37_00545 PF00753 Metallo-beta-lactamase superfamily LMJ37_00555 PF00075 RNase H LMJ37_00560 PF00929 Exonuclease LMJ37_00580 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LMJ37_00590 PF00753 Metallo-beta-lactamase superfamily LMJ37_00590 PF12706 Beta-lactamase superfamily domain LMJ37_00595 PF06463 Molybdenum Cofactor Synthesis C LMJ37_00595 PF04055 Radical SAM superfamily LMJ37_00610 PF02597 ThiS family LMJ37_00635 PF02575 YbaB/EbfC DNA-binding family LMJ37_00640 PF13662 Toprim domain LMJ37_00640 PF02132 RecR protein LMJ37_00645 PF01230 HIT domain LMJ37_00665 PF17863 AAA lid domain LMJ37_00665 PF07726 ATPase family associated with various cellular activities (AAA) LMJ37_00685 PF02545 Maf-like protein LMJ37_00690 PF02620 Large ribosomal RNA subunit accumulation protein YceD LMJ37_00695 PF01783 Ribosomal L32p protein family LMJ37_00700 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LMJ37_00700 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LMJ37_00710 PF00698 Acyl transferase domain LMJ37_00720 PF00550 Phosphopantetheine attachment site LMJ37_00725 PF02801 Beta-ketoacyl synthase, C-terminal domain LMJ37_00725 PF00109 Beta-ketoacyl synthase, N-terminal domain LMJ37_00730 PF00425 chorismate binding enzyme LMJ37_00730 PF04715 Anthranilate synthase component I, N terminal region LMJ37_00735 PF02618 YceG-like family LMJ37_00740 PF09115 DNA polymerase III, delta subunit, C terminal LMJ37_00780 PF02954 Bacterial regulatory protein, Fis family LMJ37_00780 PF00158 Sigma-54 interaction domain LMJ37_00780 PF06506 Propionate catabolism activator LMJ37_00790 PF00285 Citrate synthase, C-terminal domain LMJ37_00795 PF00694 Aconitase C-terminal domain LMJ37_00795 PF00330 Aconitase family (aconitate hydratase) LMJ37_00800 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH LMJ37_00810 PF04303 PrpF protein LMJ37_00815 PF07715 TonB-dependent Receptor Plug Domain LMJ37_00815 PF00593 TonB dependent receptor LMJ37_00825 PF00207 Alpha-2-macroglobulin family LMJ37_00825 PF07703 Alpha-2-macroglobulin bait region domain LMJ37_00825 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain LMJ37_00825 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain LMJ37_00825 PF11974 Bacterial alpha-2-macroglobulin MG3 domain LMJ37_00825 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain LMJ37_00825 PF01835 MG2 domain LMJ37_00825 PF17962 Bacterial macroglobulin domain 6 LMJ37_00840 PF06832 Penicillin-Binding Protein C-terminus Family LMJ37_00840 PF00905 Penicillin binding protein transpeptidase domain LMJ37_00840 PF00912 Transglycosylase LMJ37_00850 PF08534 Redoxin LMJ37_00860 PF00226 DnaJ domain LMJ37_00860 PF01556 DnaJ C terminal domain LMJ37_00865 PF00072 Response regulator receiver domain LMJ37_00870 PF01145 SPFH domain / Band 7 family LMJ37_00870 PF12221 Bacterial membrane protein N terminal LMJ37_00875 PF01145 SPFH domain / Band 7 family LMJ37_00885 PF00709 Adenylosuccinate synthetase LMJ37_00890 PF11838 ERAP1-like C-terminal domain LMJ37_00890 PF01433 Peptidase family M1 domain LMJ37_00905 PF00440 Bacterial regulatory proteins, tetR family LMJ37_00915 PF08463 EcoEI R protein C-terminal LMJ37_00915 PF00271 Helicase conserved C-terminal domain LMJ37_00915 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) LMJ37_00915 PF04851 Type III restriction enzyme, res subunit LMJ37_00930 PF12161 HsdM N-terminal domain LMJ37_00930 PF02384 N-6 DNA Methylase LMJ37_00935 PF01420 Type I restriction modification DNA specificity domain LMJ37_00960 PF00300 Histidine phosphatase superfamily (branch 1) LMJ37_00960 PF13456 Reverse transcriptase-like LMJ37_00965 PF01256 Carbohydrate kinase LMJ37_00975 PF00723 Glycosyl hydrolases family 15 LMJ37_00990 PF07971 Glycosyl hydrolase family 92 LMJ37_00990 PF17678 Glycosyl hydrolase family 92 N-terminal domain LMJ37_00995 PF00106 short chain dehydrogenase LMJ37_01010 PF07992 Pyridine nucleotide-disulphide oxidoreductase LMJ37_01030 PF17755 UvrA DNA-binding domain LMJ37_01035 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LMJ37_01035 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LMJ37_01040 PF03450 CO dehydrogenase flavoprotein C-terminal domain LMJ37_01040 PF00941 FAD binding domain in molybdopterin dehydrogenase LMJ37_01045 PF00111 2Fe-2S iron-sulfur cluster binding domain LMJ37_01045 PF01799 [2Fe-2S] binding domain LMJ37_01080 PF01726 LexA DNA binding domain LMJ37_01080 PF00717 Peptidase S24-like LMJ37_01095 PF07733 Bacterial DNA polymerase III alpha NTPase domain LMJ37_01095 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LMJ37_01095 PF14579 Helix-hairpin-helix motif LMJ37_01095 PF02811 PHP domain LMJ37_01105 PF00326 Prolyl oligopeptidase family LMJ37_01115 PF03169 OPT oligopeptide transporter protein LMJ37_01130 PF00326 Prolyl oligopeptidase family LMJ37_01130 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region LMJ37_01130 PF07676 WD40-like Beta Propeller Repeat LMJ37_01150 PF02311 AraC-like ligand binding domain LMJ37_01150 PF12833 Helix-turn-helix domain LMJ37_01165 PF18011 C-terminal domain found in long catalases LMJ37_01165 PF06628 Catalase-related immune-responsive LMJ37_01165 PF00199 Catalase LMJ37_01170 PF00248 Aldo/keto reductase family LMJ37_01175 PF00135 Carboxylesterase family LMJ37_01180 PF02347 Glycine cleavage system P-protein LMJ37_01185 PF07690 Major Facilitator Superfamily LMJ37_01200 PF08019 Phosphoethanolamine transferase EptA/EptB LMJ37_01200 PF00884 Sulfatase LMJ37_01215 PF00486 Transcriptional regulatory protein, C terminal LMJ37_01215 PF00072 Response regulator receiver domain LMJ37_01220 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_01220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_01220 PF08521 Two-component sensor kinase N-terminal LMJ37_01230 PF03776 Septum formation topological specificity factor MinE LMJ37_01235 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LMJ37_01240 PF05209 Septum formation inhibitor MinC, N-terminal domain LMJ37_01240 PF03775 Septum formation inhibitor MinC, C-terminal domain LMJ37_01250 PF07730 Histidine kinase LMJ37_01255 PF00072 Response regulator receiver domain LMJ37_01255 PF00196 Bacterial regulatory proteins, luxR family LMJ37_01270 PF00730 HhH-GPD superfamily base excision DNA repair protein LMJ37_01300 PF02222 ATP-grasp domain LMJ37_01310 PF04376 Arginine-tRNA-protein transferase, N terminus LMJ37_01310 PF04377 Arginine-tRNA-protein transferase, C terminus LMJ37_01335 PF00378 Enoyl-CoA hydratase/isomerase LMJ37_01350 PF00005 ABC transporter LMJ37_01350 PF17760 UvrA interaction domain LMJ37_01350 PF17755 UvrA DNA-binding domain LMJ37_01355 PF00829 Ribosomal prokaryotic L21 protein LMJ37_01360 PF01016 Ribosomal L27 protein LMJ37_01365 PF01018 GTP1/OBG LMJ37_01365 PF01926 50S ribosome-binding GTPase LMJ37_01370 PF01649 Ribosomal protein S20 LMJ37_01375 PF03023 Lipid II flippase MurJ LMJ37_01380 PF06574 FAD synthetase LMJ37_01380 PF01687 Riboflavin kinase LMJ37_01385 PF08264 Anticodon-binding domain of tRNA LMJ37_01385 PF00133 tRNA synthetases class I (I, L, M and V) LMJ37_01385 PF06827 Zinc finger found in FPG and IleRS LMJ37_01390 PF01252 Signal peptidase (SPase) II LMJ37_01395 PF02401 LytB protein LMJ37_01405 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LMJ37_01405 PF06481 COX Aromatic Rich Motif LMJ37_01410 PF00115 Cytochrome C and Quinol oxidase polypeptide I LMJ37_01415 PF00510 Cytochrome c oxidase subunit III LMJ37_01420 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LMJ37_01430 PF18073 Rubredoxin metal binding domain LMJ37_01435 PF05656 Protein of unknown function (DUF805) LMJ37_01445 PF12833 Helix-turn-helix domain LMJ37_01450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_01450 PF00183 Hsp90 protein LMJ37_01460 PF01740 STAS domain LMJ37_01460 PF08678 Rsbr N terminal LMJ37_01465 PF01740 STAS domain LMJ37_01470 PF13581 Histidine kinase-like ATPase domain LMJ37_01480 PF00072 Response regulator receiver domain LMJ37_01480 PF17149 Periplasmic sensor domain found in signal transduction proteins LMJ37_01480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_01480 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_01480 PF01627 Hpt domain LMJ37_01480 PF00672 HAMP domain LMJ37_01485 PF08448 PAS fold LMJ37_01485 PF13188 PAS domain LMJ37_01485 PF00072 Response regulator receiver domain LMJ37_01485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_01485 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_01490 PF04616 Glycosyl hydrolases family 43 LMJ37_01490 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain LMJ37_01495 PF07715 TonB-dependent Receptor Plug Domain LMJ37_01495 PF00593 TonB dependent receptor LMJ37_01500 PF00085 Thioredoxin LMJ37_01505 PF07237 Protein of unknown function (DUF1428) LMJ37_01510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_01510 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_01510 PF02702 Osmosensitive K+ channel His kinase sensor domain LMJ37_01510 PF13493 Domain of unknown function (DUF4118) LMJ37_01510 PF13492 GAF domain LMJ37_01515 PF01339 CheB methylesterase LMJ37_01520 PF01739 CheR methyltransferase, SAM binding domain LMJ37_01520 PF03705 CheR methyltransferase, all-alpha domain LMJ37_01525 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LMJ37_01525 PF00072 Response regulator receiver domain LMJ37_01525 PF01627 Hpt domain LMJ37_01525 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_01525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_01525 PF00672 HAMP domain LMJ37_01530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_01530 PF13426 PAS domain LMJ37_01530 PF00072 Response regulator receiver domain LMJ37_01535 PF00072 Response regulator receiver domain LMJ37_01550 PF06964 Alpha-L-arabinofuranosidase C-terminal domain LMJ37_01555 PF01263 Aldose 1-epimerase LMJ37_01560 PF01578 Cytochrome C assembly protein LMJ37_01565 PF02978 Signal peptide binding domain LMJ37_01565 PF00448 SRP54-type protein, GTPase domain LMJ37_01565 PF02881 SRP54-type protein, helical bundle domain LMJ37_01570 PF03060 Nitronate monooxygenase LMJ37_01575 PF01063 Amino-transferase class IV LMJ37_01580 PF00886 Ribosomal protein S16 LMJ37_01585 PF01782 RimM N-terminal domain LMJ37_01585 PF05239 PRC-barrel domain LMJ37_01590 PF01746 tRNA (Guanine-1)-methyltransferase LMJ37_01595 PF01245 Ribosomal protein L19 LMJ37_01600 PF01554 MatE LMJ37_01615 PF01479 S4 domain LMJ37_01620 PF00141 Peroxidase LMJ37_01630 PF05188 MutS domain II LMJ37_01630 PF00488 MutS domain V LMJ37_01630 PF05190 MutS family domain IV LMJ37_01630 PF05192 MutS domain III LMJ37_01630 PF01624 MutS domain I LMJ37_01655 PF01527 Transposase LMJ37_01670 PF02837 Glycosyl hydrolases family 2, sugar binding domain LMJ37_01670 PF16355 Domain of unknown function (DUF4982) LMJ37_01670 PF00703 Glycosyl hydrolases family 2 LMJ37_01670 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 LMJ37_01670 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LMJ37_01675 PF07745 Glycosyl hydrolase family 53 LMJ37_01685 PF09856 Predicted transcriptional regulator (DUF2083) LMJ37_01685 PF06114 IrrE N-terminal-like domain LMJ37_01685 PF01381 Helix-turn-helix LMJ37_01690 PF00171 Aldehyde dehydrogenase family LMJ37_01695 PF02770 Acyl-CoA dehydrogenase, middle domain LMJ37_01695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LMJ37_01695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LMJ37_01700 PF00378 Enoyl-CoA hydratase/isomerase LMJ37_01705 PF00378 Enoyl-CoA hydratase/isomerase LMJ37_01705 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LMJ37_01705 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LMJ37_01710 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LMJ37_01710 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LMJ37_01715 PF01545 Cation efflux family LMJ37_01720 PF00378 Enoyl-CoA hydratase/isomerase LMJ37_01720 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LMJ37_01720 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LMJ37_01725 PF04542 Sigma-70 region 2 LMJ37_01725 PF08281 Sigma-70, region 4 LMJ37_01735 PF13180 PDZ domain LMJ37_01740 PF00679 Elongation factor G C-terminus LMJ37_01740 PF00009 Elongation factor Tu GTP binding domain LMJ37_01740 PF03144 Elongation factor Tu domain 2 LMJ37_01740 PF06421 GTP-binding protein LepA C-terminus LMJ37_01745 PF10502 Signal peptidase, peptidase S26 LMJ37_01755 PF00035 Double-stranded RNA binding motif LMJ37_01755 PF14622 Ribonuclease-III-like LMJ37_01760 PF07650 KH domain LMJ37_01760 PF01926 50S ribosome-binding GTPase LMJ37_01765 PF02565 Recombination protein O C terminal LMJ37_01765 PF11967 Recombination protein O N terminal LMJ37_01775 PF05958 tRNA (Uracil-5-)-methyltransferase LMJ37_01780 PF01928 CYTH domain LMJ37_01785 PF01323 DSBA-like thioredoxin domain LMJ37_01790 PF01593 Flavin containing amine oxidoreductase LMJ37_01795 PF04244 Deoxyribodipyrimidine photo-lyase-related protein LMJ37_01800 PF00933 Glycosyl hydrolase family 3 N terminal domain LMJ37_01805 PF00156 Phosphoribosyl transferase domain LMJ37_01810 PF01048 Phosphorylase superfamily LMJ37_01815 PF00313 'Cold-shock' DNA-binding domain LMJ37_01820 PF01494 FAD binding domain LMJ37_01825 PF01494 FAD binding domain LMJ37_01840 PF00271 Helicase conserved C-terminal domain LMJ37_01840 PF08494 DEAD/H associated LMJ37_01840 PF00270 DEAD/DEAH box helicase LMJ37_01845 PF04679 ATP dependent DNA ligase C terminal region LMJ37_01845 PF04675 DNA ligase N terminus LMJ37_01845 PF01068 ATP dependent DNA ligase domain LMJ37_01855 PF04679 ATP dependent DNA ligase C terminal region LMJ37_01855 PF01068 ATP dependent DNA ligase domain LMJ37_01855 PF04675 DNA ligase N terminus LMJ37_01870 PF00990 Diguanylate cyclase, GGDEF domain LMJ37_01870 PF00072 Response regulator receiver domain LMJ37_01885 PF00108 Thiolase, N-terminal domain LMJ37_01885 PF02803 Thiolase, C-terminal domain LMJ37_01890 PF12951 Passenger-associated-transport-repeat LMJ37_01890 PF03797 Autotransporter beta-domain LMJ37_01890 PF00082 Subtilase family LMJ37_01895 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LMJ37_01895 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LMJ37_01910 PF01863 Protein of unknown function DUF45 LMJ37_01915 PF07043 Protein of unknown function (DUF1328) LMJ37_01925 PF01258 Prokaryotic dksA/traR C4-type zinc finger LMJ37_01945 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LMJ37_01955 PF03831 PhnA domain LMJ37_01955 PF08274 PhnA Zinc-Ribbon LMJ37_01960 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LMJ37_01965 PF07690 Major Facilitator Superfamily LMJ37_02000 PF03706 Lysylphosphatidylglycerol synthase TM region LMJ37_02000 PF09924 Uncharacterised conserved protein (DUF2156) LMJ37_02010 PF01042 Endoribonuclease L-PSP LMJ37_02055 PF04542 Sigma-70 region 2 LMJ37_02055 PF04545 Sigma-70, region 4 LMJ37_02070 PF04060 Putative Fe-S cluster LMJ37_02080 PF09334 tRNA synthetases class I (M) LMJ37_02080 PF01588 Putative tRNA binding domain LMJ37_02095 PF00005 ABC transporter LMJ37_02095 PF13732 Domain of unknown function (DUF4162) LMJ37_02100 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LMJ37_02105 PF00324 Amino acid permease LMJ37_02110 PF02574 Homocysteine S-methyltransferase LMJ37_02120 PF02592 Putative vitamin uptake transporter LMJ37_02140 PF03551 Transcriptional regulator PadR-like family LMJ37_02160 PF03653 Uncharacterised protein family (UPF0093) LMJ37_02175 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LMJ37_02180 PF07733 Bacterial DNA polymerase III alpha NTPase domain LMJ37_02180 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LMJ37_02180 PF14579 Helix-hairpin-helix motif LMJ37_02180 PF02811 PHP domain LMJ37_02180 PF01336 OB-fold nucleic acid binding domain LMJ37_02185 PF01351 Ribonuclease HII LMJ37_02190 PF02684 Lipid-A-disaccharide synthetase LMJ37_02195 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LMJ37_02195 PF00132 Bacterial transferase hexapeptide (six repeats) LMJ37_02200 PF07977 FabA-like domain LMJ37_02205 PF00132 Bacterial transferase hexapeptide (six repeats) LMJ37_02205 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LMJ37_02215 PF01103 Surface antigen LMJ37_02215 PF07244 Surface antigen variable number repeat LMJ37_02220 PF17820 PDZ domain LMJ37_02220 PF02163 Peptidase family M50 LMJ37_02225 PF13288 DXP reductoisomerase C-terminal domain LMJ37_02225 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LMJ37_02225 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LMJ37_02235 PF01255 Putative undecaprenyl diphosphate synthase LMJ37_02240 PF01765 Ribosome recycling factor LMJ37_02245 PF00696 Amino acid kinase family LMJ37_02250 PF00990 Diguanylate cyclase, GGDEF domain LMJ37_02250 PF00072 Response regulator receiver domain LMJ37_02255 PF00889 Elongation factor TS LMJ37_02260 PF00318 Ribosomal protein S2 LMJ37_02295 PF00557 Metallopeptidase family M24 LMJ37_02305 PF14602 Hexapeptide repeat of succinyl-transferase LMJ37_02305 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LMJ37_02305 PF00132 Bacterial transferase hexapeptide (six repeats) LMJ37_02310 PF03960 ArsC family LMJ37_02315 PF01546 Peptidase family M20/M25/M40 LMJ37_02315 PF07687 Peptidase dimerisation domain LMJ37_02320 PF00733 Asparagine synthase LMJ37_02320 PF13537 Glutamine amidotransferase domain LMJ37_02330 PF07715 TonB-dependent Receptor Plug Domain LMJ37_02330 PF00593 TonB dependent receptor LMJ37_02335 PF01804 Penicillin amidase LMJ37_02340 PF00210 Ferritin-like domain LMJ37_02345 PF05724 Thiopurine S-methyltransferase (TPMT) LMJ37_02350 PF03989 DNA gyrase C-terminal domain, beta-propeller LMJ37_02350 PF00521 DNA gyrase/topoisomerase IV, subunit A LMJ37_02365 PF02321 Outer membrane efflux protein LMJ37_02370 PF00529 HlyD membrane-fusion protein of T1SS LMJ37_02370 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LMJ37_02375 PF07690 Major Facilitator Superfamily LMJ37_02385 PF01915 Glycosyl hydrolase family 3 C-terminal domain LMJ37_02385 PF00933 Glycosyl hydrolase family 3 N terminal domain LMJ37_02385 PF14310 Fibronectin type III-like domain LMJ37_02395 PF00854 POT family LMJ37_02420 PF12802 MarR family LMJ37_02425 PF01432 Peptidase family M3 LMJ37_02430 PF00255 Glutathione peroxidase LMJ37_02435 PF00175 Oxidoreductase NAD-binding domain LMJ37_02435 PF00970 Oxidoreductase FAD-binding domain LMJ37_02440 PF00005 ABC transporter LMJ37_02445 PF05683 Fumarase C-terminus LMJ37_02445 PF05681 Fumarate hydratase (Fumerase) LMJ37_02455 PF00484 Carbonic anhydrase LMJ37_02460 PF02253 Phospholipase A1 LMJ37_02470 PF00313 'Cold-shock' DNA-binding domain LMJ37_02485 PF00899 ThiF family LMJ37_02490 PF01026 TatD related DNase LMJ37_02505 PF02770 Acyl-CoA dehydrogenase, middle domain LMJ37_02505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LMJ37_02505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LMJ37_02515 PF00043 Glutathione S-transferase, C-terminal domain LMJ37_02515 PF02798 Glutathione S-transferase, N-terminal domain LMJ37_02520 PF00733 Asparagine synthase LMJ37_02520 PF13537 Glutamine amidotransferase domain LMJ37_02525 PF03358 NADPH-dependent FMN reductase LMJ37_02530 PF03796 DnaB-like helicase C terminal domain LMJ37_02530 PF00772 DnaB-like helicase N terminal domain LMJ37_02535 PF00875 DNA photolyase LMJ37_02535 PF03441 FAD binding domain of DNA photolyase LMJ37_02540 PF05736 OprF membrane domain LMJ37_02540 PF00691 OmpA family LMJ37_02545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMJ37_02545 PF03466 LysR substrate binding domain LMJ37_02560 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LMJ37_02565 PF00873 AcrB/AcrD/AcrF family LMJ37_02570 PF00106 short chain dehydrogenase LMJ37_02575 PF02321 Outer membrane efflux protein LMJ37_02580 PF00990 Diguanylate cyclase, GGDEF domain LMJ37_02590 PF00990 Diguanylate cyclase, GGDEF domain LMJ37_02650 PF00145 C-5 cytosine-specific DNA methylase LMJ37_02750 PF00772 DnaB-like helicase N terminal domain LMJ37_02750 PF03796 DnaB-like helicase C terminal domain LMJ37_02835 PF10668 Phage terminase small subunit LMJ37_02835 PF03592 Terminase small subunit LMJ37_02915 PF06791 Prophage tail length tape measure protein LMJ37_02965 PF13356 Arm DNA-binding domain LMJ37_02965 PF00589 Phage integrase family LMJ37_02975 PF00082 Subtilase family LMJ37_02980 PF01668 SmpB protein LMJ37_02985 PF03364 Polyketide cyclase / dehydrase and lipid transport LMJ37_02990 PF03658 RnfH family Ubiquitin LMJ37_02995 PF04355 SmpA / OmlA family LMJ37_03000 PF01475 Ferric uptake regulator family LMJ37_03005 PF02463 RecF/RecN/SMC N terminal domain LMJ37_03010 PF01628 HrcA protein C terminal domain LMJ37_03010 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding LMJ37_03015 PF01025 GrpE LMJ37_03020 PF00012 Hsp70 protein LMJ37_03025 PF00684 DnaJ central domain LMJ37_03025 PF00226 DnaJ domain LMJ37_03025 PF01556 DnaJ C terminal domain LMJ37_03030 PF08543 Phosphomethylpyrimidine kinase LMJ37_03055 PF00664 ABC transporter transmembrane region LMJ37_03055 PF00005 ABC transporter LMJ37_03055 PF03412 Peptidase C39 family LMJ37_03060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMJ37_03060 PF03466 LysR substrate binding domain LMJ37_03065 PF00664 ABC transporter transmembrane region LMJ37_03065 PF00005 ABC transporter LMJ37_03070 PF01205 Uncharacterized protein family UPF0029 LMJ37_03075 PF03641 Possible lysine decarboxylase LMJ37_03080 PF07992 Pyridine nucleotide-disulphide oxidoreductase LMJ37_03080 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LMJ37_03085 PF02817 e3 binding domain LMJ37_03085 PF00364 Biotin-requiring enzyme LMJ37_03085 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LMJ37_03090 PF16870 2-oxoglutarate dehydrogenase C-terminal LMJ37_03090 PF02779 Transketolase, pyrimidine binding domain LMJ37_03090 PF00676 Dehydrogenase E1 component LMJ37_03090 PF16078 2-oxoglutarate dehydrogenase N-terminus LMJ37_03100 PF08007 Cupin superfamily protein LMJ37_03110 PF00206 Lyase LMJ37_03110 PF08328 Adenylosuccinate lyase C-terminal LMJ37_03120 PF03471 Transporter associated domain LMJ37_03120 PF01595 Cyclin M transmembrane N-terminal domain LMJ37_03120 PF00571 CBS domain LMJ37_03125 PF10415 Fumarase C C-terminus LMJ37_03125 PF00206 Lyase LMJ37_03150 PF00005 ABC transporter LMJ37_03155 PF00392 Bacterial regulatory proteins, gntR family LMJ37_03165 PF00255 Glutathione peroxidase LMJ37_03170 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LMJ37_03170 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LMJ37_03175 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LMJ37_03175 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LMJ37_03175 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LMJ37_03180 PF04102 SlyX LMJ37_03195 PF00356 Bacterial regulatory proteins, lacI family LMJ37_03200 PF07690 Major Facilitator Superfamily LMJ37_03205 PF00294 pfkB family carbohydrate kinase LMJ37_03215 PF02310 B12 binding domain LMJ37_03215 PF02607 B12 binding domain LMJ37_03215 PF02965 Vitamin B12 dependent methionine synthase, activation domain LMJ37_03215 PF00809 Pterin binding enzyme LMJ37_03215 PF02574 Homocysteine S-methyltransferase LMJ37_03220 PF02574 Homocysteine S-methyltransferase LMJ37_03220 PF00809 Pterin binding enzyme LMJ37_03225 PF01209 ubiE/COQ5 methyltransferase family LMJ37_03260 PF17876 Cold shock domain LMJ37_03260 PF08461 Ribonuclease R winged-helix domain LMJ37_03260 PF08206 Ribonuclease B OB domain LMJ37_03260 PF00575 S1 RNA binding domain LMJ37_03260 PF00773 RNB domain LMJ37_03270 PF08032 RNA 2'-O ribose methyltransferase substrate binding LMJ37_03270 PF00588 SpoU rRNA Methylase family LMJ37_03275 PF00990 Diguanylate cyclase, GGDEF domain LMJ37_03280 PF00929 Exonuclease LMJ37_03290 PF01895 PhoU domain LMJ37_03295 PF00005 ABC transporter LMJ37_03300 PF00528 Binding-protein-dependent transport system inner membrane component LMJ37_03305 PF00528 Binding-protein-dependent transport system inner membrane component LMJ37_03310 PF12849 PBP superfamily domain LMJ37_03315 PF12849 PBP superfamily domain LMJ37_03330 PF00484 Carbonic anhydrase LMJ37_03335 PF00916 Sulfate permease family LMJ37_03335 PF01740 STAS domain LMJ37_03340 PF00730 HhH-GPD superfamily base excision DNA repair protein LMJ37_03340 PF00633 Helix-hairpin-helix motif LMJ37_03340 PF10576 Iron-sulfur binding domain of endonuclease III LMJ37_03350 PF00378 Enoyl-CoA hydratase/isomerase LMJ37_03355 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LMJ37_03355 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LMJ37_03360 PF00293 NUDIX domain LMJ37_03365 PF00581 Rhodanese-like domain LMJ37_03395 PF00005 ABC transporter LMJ37_03395 PF16326 ABC transporter C-terminal domain LMJ37_03395 PF12848 ABC transporter LMJ37_03405 PF10672 S-adenosylmethionine-dependent methyltransferase LMJ37_03405 PF02926 THUMP domain LMJ37_03405 PF01170 Putative RNA methylase family UPF0020 LMJ37_03410 PF01513 ATP-NAD kinase LMJ37_03435 PF00929 Exonuclease LMJ37_03435 PF08411 Exonuclease C-terminal LMJ37_03445 PF01494 FAD binding domain LMJ37_03450 PF00266 Aminotransferase class-V LMJ37_03460 PF06052 3-hydroxyanthranilic acid dioxygenase LMJ37_03465 PF00484 Carbonic anhydrase LMJ37_03510 PF00196 Bacterial regulatory proteins, luxR family LMJ37_03510 PF00072 Response regulator receiver domain LMJ37_03530 PF04299 Putative FMN-binding domain LMJ37_03550 PF01336 OB-fold nucleic acid binding domain LMJ37_03550 PF00152 tRNA synthetases class II (D, K and N) LMJ37_03555 PF01521 Iron-sulphur cluster biosynthesis LMJ37_03560 PF01250 Ribosomal protein S6 LMJ37_03565 PF01084 Ribosomal protein S18 LMJ37_03570 PF03948 Ribosomal protein L9, C-terminal domain LMJ37_03570 PF01281 Ribosomal protein L9, N-terminal domain LMJ37_03575 PF02463 RecF/RecN/SMC N terminal domain LMJ37_03580 PF04354 ZipA, C-terminal FtsZ-binding domain LMJ37_03590 PF00155 Aminotransferase class I and II LMJ37_03595 PF12826 Helix-hairpin-helix motif LMJ37_03595 PF00533 BRCA1 C Terminus (BRCT) domain LMJ37_03595 PF01653 NAD-dependent DNA ligase adenylation domain LMJ37_03595 PF03120 NAD-dependent DNA ligase OB-fold domain LMJ37_03595 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LMJ37_03600 PF00152 tRNA synthetases class II (D, K and N) LMJ37_03610 PF01008 Initiation factor 2 subunit family LMJ37_03615 PF00521 DNA gyrase/topoisomerase IV, subunit A LMJ37_03615 PF03989 DNA gyrase C-terminal domain, beta-propeller LMJ37_03620 PF13360 PQQ-like domain LMJ37_03630 PF01175 Urocanase Rossmann-like domain LMJ37_03630 PF17392 Urocanase C-terminal domain LMJ37_03630 PF17391 Urocanase N-terminal domain LMJ37_03640 PF00221 Aromatic amino acid lyase LMJ37_03645 PF07969 Amidohydrolase family LMJ37_03660 PF00392 Bacterial regulatory proteins, gntR family LMJ37_03660 PF07702 UTRA domain LMJ37_03690 PF01794 Ferric reductase like transmembrane component LMJ37_03695 PF00174 Oxidoreductase molybdopterin binding domain LMJ37_03700 PF00266 Aminotransferase class-V LMJ37_03705 PF01842 ACT domain LMJ37_03705 PF01817 Chorismate mutase type II LMJ37_03705 PF00800 Prephenate dehydratase LMJ37_03710 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LMJ37_03720 PF03544 Gram-negative bacterial TonB protein C-terminal LMJ37_03725 PF02403 Seryl-tRNA synthetase N-terminal domain LMJ37_03725 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LMJ37_03730 PF02525 Flavodoxin-like fold LMJ37_03735 PF03466 LysR substrate binding domain LMJ37_03735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMJ37_03750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LMJ37_03750 PF02203 Tar ligand binding domain homologue LMJ37_03750 PF00672 HAMP domain LMJ37_03755 PF01494 FAD binding domain LMJ37_03765 PF00072 Response regulator receiver domain LMJ37_03765 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_03765 PF08448 PAS fold LMJ37_03765 PF13188 PAS domain LMJ37_03765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_03770 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LMJ37_03770 PF00672 HAMP domain LMJ37_03770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_03770 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_03770 PF01627 Hpt domain LMJ37_03770 PF00072 Response regulator receiver domain LMJ37_03775 PF06745 KaiC LMJ37_03780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_03780 PF00072 Response regulator receiver domain LMJ37_03780 PF13426 PAS domain LMJ37_03790 PF03918 Cytochrome C biogenesis protein LMJ37_03795 PF08534 Redoxin LMJ37_03800 PF01578 Cytochrome C assembly protein LMJ37_03800 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LMJ37_03805 PF03100 CcmE LMJ37_03815 PF01578 Cytochrome C assembly protein LMJ37_03820 PF00082 Subtilase family LMJ37_03830 PF08281 Sigma-70, region 4 LMJ37_03830 PF04542 Sigma-70 region 2 LMJ37_03840 PF00034 Cytochrome c LMJ37_03855 PF05523 WxcM-like, C-terminal LMJ37_03875 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LMJ37_03880 PF01943 Polysaccharide biosynthesis protein LMJ37_03885 PF00535 Glycosyl transferase family 2 LMJ37_03900 PF08241 Methyltransferase domain LMJ37_03935 PF00005 ABC transporter LMJ37_03940 PF00005 ABC transporter LMJ37_03940 PF00664 ABC transporter transmembrane region LMJ37_03945 PF07690 Major Facilitator Superfamily LMJ37_03950 PF00296 Luciferase-like monooxygenase LMJ37_03965 PF01595 Cyclin M transmembrane N-terminal domain LMJ37_03965 PF00571 CBS domain LMJ37_03965 PF03471 Transporter associated domain LMJ37_03975 PF01384 Phosphate transporter family LMJ37_03990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_03990 PF00986 DNA gyrase B subunit, carboxyl terminus LMJ37_03990 PF00204 DNA gyrase B LMJ37_03990 PF01751 Toprim domain LMJ37_04000 PF06418 CTP synthase N-terminus LMJ37_04000 PF00117 Glutamine amidotransferase class-I LMJ37_04005 PF00793 DAHP synthetase I family LMJ37_04015 PF00113 Enolase, C-terminal TIM barrel domain LMJ37_04015 PF03952 Enolase, N-terminal domain LMJ37_04020 PF04977 Septum formation initiator LMJ37_04025 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LMJ37_04030 PF02542 YgbB family LMJ37_04035 PF01142 tRNA pseudouridine synthase D (TruD) LMJ37_04040 PF01713 Smr domain LMJ37_04045 PF01975 Survival protein SurE LMJ37_04055 PF09335 SNARE associated Golgi protein LMJ37_04060 PF01551 Peptidase family M23 LMJ37_04060 PF01476 LysM domain LMJ37_04065 PF04430 Protein of unknown function (DUF498/DUF598) LMJ37_04070 PF01985 CRS1 / YhbY (CRM) domain LMJ37_04075 PF01728 FtsJ-like methyltransferase LMJ37_04080 PF17862 AAA+ lid domain LMJ37_04080 PF00004 ATPase family associated with various cellular activities (AAA) LMJ37_04080 PF01434 Peptidase family M41 LMJ37_04080 PF06480 FtsH Extracellular LMJ37_04085 PF00809 Pterin binding enzyme LMJ37_04095 PF17209 Hfq protein LMJ37_04100 PF01926 50S ribosome-binding GTPase LMJ37_04100 PF13167 GTP-binding GTPase N-terminal LMJ37_04100 PF16360 GTP-binding GTPase Middle Region LMJ37_04105 PF02464 Competence-damaged protein LMJ37_04110 PF03109 ABC1 family LMJ37_04115 PF00717 Peptidase S24-like LMJ37_04115 PF01726 LexA DNA binding domain LMJ37_04120 PF00154 recA bacterial DNA recombination protein LMJ37_04125 PF02631 RecX family LMJ37_04130 PF02272 DHHA1 domain LMJ37_04130 PF01411 tRNA synthetases class II (A) LMJ37_04130 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LMJ37_04135 PF02599 Global regulator protein family LMJ37_04170 PF04381 Putative exonuclease, RdgC LMJ37_04200 PF00145 C-5 cytosine-specific DNA methylase LMJ37_04360 PF00182 Chitinase class I LMJ37_04440 PF06791 Prophage tail length tape measure protein LMJ37_04500 PF00589 Phage integrase family LMJ37_04500 PF14659 Phage integrase, N-terminal SAM-like domain LMJ37_04500 PF13356 Arm DNA-binding domain LMJ37_04505 PF08447 PAS fold LMJ37_04505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LMJ37_04505 PF13426 PAS domain LMJ37_04510 PF02678 Pirin LMJ37_04510 PF17954 Quercetinase C-terminal cupin domain LMJ37_04515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMJ37_04515 PF03466 LysR substrate binding domain LMJ37_04540 PF08543 Phosphomethylpyrimidine kinase LMJ37_04555 PF13638 PIN domain LMJ37_04555 PF02562 PhoH-like protein LMJ37_04560 PF00578 AhpC/TSA family LMJ37_04575 PF00701 Dihydrodipicolinate synthetase family LMJ37_04585 PF11953 Domain of unknown function (DUF3470) LMJ37_04585 PF00037 4Fe-4S binding domain LMJ37_04590 PF05035 2-keto-3-deoxy-galactonokinase LMJ37_04595 PF08450 SMP-30/Gluconolactonase/LRE-like region LMJ37_04600 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LMJ37_04600 PF13378 Enolase C-terminal domain-like LMJ37_04605 PF01081 KDPG and KHG aldolase LMJ37_04610 PF03466 LysR substrate binding domain LMJ37_04610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMJ37_04625 PF03442 Carbohydrate binding domain X2 LMJ37_04625 PF00942 Cellulose binding domain LMJ37_04640 PF17137 Domain of unknown function (DUF5110) LMJ37_04640 PF16338 Domain of unknown function (DUF4968) LMJ37_04640 PF01055 Glycosyl hydrolases family 31 LMJ37_04650 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LMJ37_04650 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LMJ37_04660 PF00083 Sugar (and other) transporter LMJ37_04680 PF01520 N-acetylmuramoyl-L-alanine amidase LMJ37_04685 PF02649 Type I GTP cyclohydrolase folE2 LMJ37_04695 PF12627 Probable RNA and SrmB- binding site of polymerase A LMJ37_04695 PF12626 Polymerase A arginine-rich C-terminus LMJ37_04695 PF01743 Poly A polymerase head domain LMJ37_04700 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LMJ37_04705 PF02548 Ketopantoate hydroxymethyltransferase LMJ37_04710 PF02569 Pantoate-beta-alanine ligase LMJ37_04715 PF02261 Aspartate decarboxylase LMJ37_04720 PF00342 Phosphoglucose isomerase LMJ37_04740 PF00933 Glycosyl hydrolase family 3 N terminal domain LMJ37_04740 PF14310 Fibronectin type III-like domain LMJ37_04740 PF01915 Glycosyl hydrolase family 3 C-terminal domain LMJ37_04745 PF00474 Sodium:solute symporter family LMJ37_04750 PF00360 Phytochrome region LMJ37_04750 PF01590 GAF domain LMJ37_04750 PF00563 EAL domain LMJ37_04750 PF00990 Diguanylate cyclase, GGDEF domain LMJ37_04755 PF02013 Cellulose or protein binding domain LMJ37_04755 PF00150 Cellulase (glycosyl hydrolase family 5) LMJ37_04760 PF00072 Response regulator receiver domain LMJ37_04770 PF04551 GcpE protein LMJ37_04775 PF01569 PAP2 superfamily LMJ37_04785 PF07690 Major Facilitator Superfamily LMJ37_04790 PF01177 Asp/Glu/Hydantoin racemase LMJ37_04795 PF00892 EamA-like transporter family LMJ37_04800 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LMJ37_04800 PF01565 FAD binding domain LMJ37_04805 PF01180 Dihydroorotate dehydrogenase LMJ37_04820 PF00171 Aldehyde dehydrogenase family LMJ37_04875 PF04002 RadC-like JAB domain LMJ37_04945 PF02481 DNA recombination-mediator protein A LMJ37_04945 PF17782 DprA winged helix domain LMJ37_05005 PF02534 Type IV secretory system Conjugative DNA transfer LMJ37_05025 PF00664 ABC transporter transmembrane region LMJ37_05025 PF00005 ABC transporter LMJ37_05025 PF03412 Peptidase C39 family LMJ37_05040 PF07690 Major Facilitator Superfamily LMJ37_05045 PF02794 RTX toxin acyltransferase family LMJ37_05105 PF01734 Patatin-like phospholipase LMJ37_05155 PF00535 Glycosyl transferase family 2 LMJ37_05160 PF01522 Polysaccharide deacetylase LMJ37_05160 PF14883 Hypothetical glycosyl hydrolase family 13 LMJ37_05170 PF08479 POTRA domain, ShlB-type LMJ37_05170 PF17287 POTRA domain LMJ37_05170 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LMJ37_05175 PF05860 haemagglutination activity domain LMJ37_05175 PF13332 Hemagglutinin repeat LMJ37_05175 PF05594 Haemagluttinin repeat LMJ37_05175 PF13018 Extended Signal Peptide of Type V secretion system LMJ37_05175 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain LMJ37_05230 PF05860 haemagglutination activity domain LMJ37_05230 PF13332 Hemagglutinin repeat LMJ37_05230 PF05594 Haemagluttinin repeat LMJ37_05230 PF13018 Extended Signal Peptide of Type V secretion system LMJ37_05230 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain LMJ37_05235 PF03073 TspO/MBR family LMJ37_05240 PF00742 Homoserine dehydrogenase LMJ37_05240 PF00696 Amino acid kinase family LMJ37_05240 PF03447 Homoserine dehydrogenase, NAD binding domain LMJ37_05240 PF01842 ACT domain LMJ37_05240 PF13840 ACT domain LMJ37_05245 PF08544 GHMP kinases C terminal LMJ37_05245 PF00288 GHMP kinases N terminal domain LMJ37_05255 PF00291 Pyridoxal-phosphate dependent enzyme LMJ37_05255 PF14821 Threonine synthase N terminus LMJ37_05265 PF00027 Cyclic nucleotide-binding domain LMJ37_05265 PF13545 Crp-like helix-turn-helix domain LMJ37_05270 PF03129 Anticodon binding domain LMJ37_05270 PF13393 Histidyl-tRNA synthetase LMJ37_05280 PF01634 ATP phosphoribosyltransferase LMJ37_05280 PF08029 HisG, C-terminal domain LMJ37_05285 PF00815 Histidinol dehydrogenase LMJ37_05290 PF00155 Aminotransferase class I and II LMJ37_05295 PF00475 Imidazoleglycerol-phosphate dehydratase LMJ37_05300 PF00117 Glutamine amidotransferase class-I LMJ37_05305 PF00977 Histidine biosynthesis protein LMJ37_05310 PF00977 Histidine biosynthesis protein LMJ37_05315 PF01502 Phosphoribosyl-AMP cyclohydrolase LMJ37_05315 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LMJ37_05335 PF03079 ARD/ARD' family LMJ37_05340 PF00596 Class II Aldolase and Adducin N-terminal domain LMJ37_05345 PF13520 Amino acid permease LMJ37_05350 PF13520 Amino acid permease LMJ37_05360 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LMJ37_05360 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LMJ37_05360 PF01842 ACT domain LMJ37_05365 PF02913 FAD linked oxidases, C-terminal domain LMJ37_05365 PF01565 FAD binding domain LMJ37_05385 PF01132 Elongation factor P (EF-P) OB domain LMJ37_05385 PF09285 Elongation factor P, C-terminal LMJ37_05385 PF08207 Elongation factor P (EF-P) KOW-like domain LMJ37_05390 PF00106 short chain dehydrogenase LMJ37_05395 PF00682 HMGL-like LMJ37_05405 PF00378 Enoyl-CoA hydratase/isomerase LMJ37_05415 PF07664 Ferrous iron transport protein B C terminus LMJ37_05415 PF02421 Ferrous iron transport protein B LMJ37_05415 PF07670 Nucleoside recognition LMJ37_05430 PF00155 Aminotransferase class I and II LMJ37_05435 PF03475 3-alpha domain LMJ37_05435 PF03473 MOSC domain LMJ37_05440 PF01113 Dihydrodipicolinate reductase, N-terminus LMJ37_05440 PF05173 Dihydrodipicolinate reductase, C-terminus LMJ37_05445 PF00117 Glutamine amidotransferase class-I LMJ37_05445 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LMJ37_05455 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LMJ37_05455 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LMJ37_05455 PF02142 MGS-like domain LMJ37_05460 PF01272 Transcription elongation factor, GreA/GreB, C-term LMJ37_05460 PF03449 Transcription elongation factor, N-terminal LMJ37_05470 PF01368 DHH family LMJ37_05470 PF02272 DHHA1 domain LMJ37_05470 PF17768 RecJ OB domain LMJ37_05480 PF04397 LytTr DNA-binding domain LMJ37_05480 PF00072 Response regulator receiver domain LMJ37_05490 PF01336 OB-fold nucleic acid binding domain LMJ37_05490 PF00152 tRNA synthetases class II (D, K and N) LMJ37_05495 PF00072 Response regulator receiver domain LMJ37_05505 PF01627 Hpt domain LMJ37_05505 PF00072 Response regulator receiver domain LMJ37_05505 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_05505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_05510 PF00378 Enoyl-CoA hydratase/isomerase LMJ37_05515 PF00501 AMP-binding enzyme LMJ37_05515 PF13193 AMP-binding enzyme C-terminal domain LMJ37_05525 PF00330 Aconitase family (aconitate hydratase) LMJ37_05525 PF00694 Aconitase C-terminal domain LMJ37_05540 PF06434 Aconitate hydratase 2 N-terminus LMJ37_05540 PF00330 Aconitase family (aconitate hydratase) LMJ37_05540 PF11791 Aconitate B N-terminal domain LMJ37_05545 PF00561 alpha/beta hydrolase fold LMJ37_05550 PF00563 EAL domain LMJ37_05550 PF00990 Diguanylate cyclase, GGDEF domain LMJ37_05550 PF03707 Bacterial signalling protein N terminal repeat LMJ37_05555 PF01339 CheB methylesterase LMJ37_05555 PF00072 Response regulator receiver domain LMJ37_05560 PF03975 CheD chemotactic sensory transduction LMJ37_05565 PF03705 CheR methyltransferase, all-alpha domain LMJ37_05565 PF01739 CheR methyltransferase, SAM binding domain LMJ37_05570 PF00672 HAMP domain LMJ37_05570 PF02203 Tar ligand binding domain homologue LMJ37_05570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LMJ37_05580 PF01584 CheW-like domain LMJ37_05585 PF07238 PilZ domain LMJ37_05585 PF07317 Flagellar regulator YcgR LMJ37_05590 PF00672 HAMP domain LMJ37_05590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LMJ37_05590 PF02203 Tar ligand binding domain homologue LMJ37_05600 PF02203 Tar ligand binding domain homologue LMJ37_05600 PF00672 HAMP domain LMJ37_05600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LMJ37_05605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LMJ37_05605 PF02203 Tar ligand binding domain homologue LMJ37_05605 PF00672 HAMP domain LMJ37_05610 PF02203 Tar ligand binding domain homologue LMJ37_05610 PF00672 HAMP domain LMJ37_05610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LMJ37_05615 PF00672 HAMP domain LMJ37_05615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LMJ37_05615 PF02203 Tar ligand binding domain homologue LMJ37_05625 PF00672 HAMP domain LMJ37_05625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LMJ37_05625 PF02203 Tar ligand binding domain homologue LMJ37_05630 PF02203 Tar ligand binding domain homologue LMJ37_05630 PF00672 HAMP domain LMJ37_05630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LMJ37_05635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LMJ37_05635 PF00672 HAMP domain LMJ37_05635 PF02203 Tar ligand binding domain homologue LMJ37_05640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LMJ37_05640 PF00672 HAMP domain LMJ37_05640 PF02203 Tar ligand binding domain homologue LMJ37_05650 PF00672 HAMP domain LMJ37_05650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LMJ37_05650 PF02203 Tar ligand binding domain homologue LMJ37_05655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LMJ37_05655 PF08269 Cache domain LMJ37_05665 PF00672 HAMP domain LMJ37_05665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LMJ37_05670 PF01584 CheW-like domain LMJ37_05670 PF09078 CheY binding LMJ37_05670 PF01627 Hpt domain LMJ37_05670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_05670 PF02895 Signal transducing histidine kinase, homodimeric domain LMJ37_05675 PF00072 Response regulator receiver domain LMJ37_05685 PF01584 CheW-like domain LMJ37_05690 PF13614 AAA domain LMJ37_05695 PF13677 Membrane MotB of proton-channel complex MotA/MotB LMJ37_05695 PF00691 OmpA family LMJ37_05700 PF01618 MotA/TolQ/ExbB proton channel family LMJ37_05780 PF04055 Radical SAM superfamily LMJ37_05780 PF13186 Iron-sulfur cluster-binding domain LMJ37_05790 PF02895 Signal transducing histidine kinase, homodimeric domain LMJ37_05790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_05790 PF01627 Hpt domain LMJ37_05790 PF00072 Response regulator receiver domain LMJ37_05790 PF01584 CheW-like domain LMJ37_05795 PF04344 Chemotaxis phosphatase, CheZ LMJ37_05800 PF00072 Response regulator receiver domain LMJ37_05805 PF04539 Sigma-70 region 3 LMJ37_05805 PF04545 Sigma-70, region 4 LMJ37_05805 PF04542 Sigma-70 region 2 LMJ37_05810 PF10609 NUBPL iron-transfer P-loop NTPase LMJ37_05815 PF00448 SRP54-type protein, GTPase domain LMJ37_05820 PF00771 FHIPEP family LMJ37_05825 PF01312 FlhB HrpN YscU SpaS Family LMJ37_05830 PF03707 Bacterial signalling protein N terminal repeat LMJ37_05830 PF00990 Diguanylate cyclase, GGDEF domain LMJ37_05830 PF00563 EAL domain LMJ37_05835 PF00990 Diguanylate cyclase, GGDEF domain LMJ37_05840 PF00990 Diguanylate cyclase, GGDEF domain LMJ37_05845 PF01311 Bacterial export proteins, family 1 LMJ37_05850 PF01313 Bacterial export proteins, family 3 LMJ37_05855 PF00813 FliP family LMJ37_05860 PF04347 Flagellar biosynthesis protein, FliO LMJ37_05865 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LMJ37_05870 PF02154 Flagellar motor switch protein FliM LMJ37_05870 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LMJ37_05890 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LMJ37_05890 PF18269 T3SS EscN ATPase C-terminal domain LMJ37_05900 PF01706 FliG C-terminal domain LMJ37_05900 PF14841 FliG middle domain LMJ37_05900 PF14842 FliG N-terminal domain LMJ37_05905 PF08345 Flagellar M-ring protein C-terminal LMJ37_05905 PF01514 Secretory protein of YscJ/FliF family LMJ37_05910 PF02049 Flagellar hook-basal body complex protein FliE LMJ37_05915 PF00535 Glycosyl transferase family 2 LMJ37_05915 PF00534 Glycosyl transferases group 1 LMJ37_05920 PF04230 Polysaccharide pyruvyl transferase LMJ37_05955 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LMJ37_05955 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LMJ37_05965 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LMJ37_05970 PF00158 Sigma-54 interaction domain LMJ37_05970 PF02954 Bacterial regulatory protein, Fis family LMJ37_05970 PF06490 Flagellar regulatory protein FleQ LMJ37_05975 PF01339 CheB methylesterase LMJ37_05975 PF00072 Response regulator receiver domain LMJ37_05980 PF00309 Sigma-54 factor, Activator interacting domain (AID) LMJ37_05980 PF04963 Sigma-54 factor, core binding domain LMJ37_05980 PF04552 Sigma-54, DNA binding domain LMJ37_05985 PF00072 Response regulator receiver domain LMJ37_05985 PF00196 Bacterial regulatory proteins, luxR family LMJ37_06000 PF02561 Flagellar protein FliS LMJ37_06005 PF07195 Flagellar hook-associated protein 2 C-terminus LMJ37_06005 PF02465 Flagellar hook-associated protein 2 N-terminus LMJ37_06005 PF07196 Flagellin hook IN motif LMJ37_06010 PF00669 Bacterial flagellin N-terminal helical region LMJ37_06010 PF00700 Bacterial flagellin C-terminal helical region LMJ37_06015 PF00669 Bacterial flagellin N-terminal helical region LMJ37_06015 PF00700 Bacterial flagellin C-terminal helical region LMJ37_06020 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LMJ37_06020 PF07196 Flagellin hook IN motif LMJ37_06025 PF10135 Rod binding protein LMJ37_06025 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LMJ37_06030 PF02119 Flagellar P-ring protein LMJ37_06035 PF02107 Flagellar L-ring protein LMJ37_06040 PF00460 Flagella basal body rod protein LMJ37_06040 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LMJ37_06045 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LMJ37_06045 PF00460 Flagella basal body rod protein LMJ37_06050 PF07559 Flagellar basal body protein FlaE LMJ37_06050 PF00460 Flagella basal body rod protein LMJ37_06050 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LMJ37_06055 PF03963 Flagellar hook capping protein - N-terminal region LMJ37_06060 PF00460 Flagella basal body rod protein LMJ37_06060 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LMJ37_06070 PF01584 CheW-like domain LMJ37_06070 PF00072 Response regulator receiver domain LMJ37_06090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_06090 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_06090 PF00989 PAS fold LMJ37_06090 PF13188 PAS domain LMJ37_06090 PF13426 PAS domain LMJ37_06095 PF00563 EAL domain LMJ37_06095 PF00990 Diguanylate cyclase, GGDEF domain LMJ37_06095 PF03707 Bacterial signalling protein N terminal repeat LMJ37_06100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_06100 PF07730 Histidine kinase LMJ37_06105 PF00990 Diguanylate cyclase, GGDEF domain LMJ37_06105 PF00563 EAL domain LMJ37_06105 PF03707 Bacterial signalling protein N terminal repeat LMJ37_06115 PF00672 HAMP domain LMJ37_06115 PF12729 Four helix bundle sensory module for signal transduction LMJ37_06115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LMJ37_06120 PF04356 Protein of unknown function (DUF489) LMJ37_06130 PF00293 NUDIX domain LMJ37_06135 PF02617 ATP-dependent Clp protease adaptor protein ClpS LMJ37_06140 PF17871 AAA lid domain LMJ37_06140 PF10431 C-terminal, D2-small domain, of ClpB protein LMJ37_06140 PF02861 Clp amino terminal domain, pathogenicity island component LMJ37_06140 PF07724 AAA domain (Cdc48 subfamily) LMJ37_06140 PF00004 ATPase family associated with various cellular activities (AAA) LMJ37_06145 PF01176 Translation initiation factor 1A / IF-1 LMJ37_06150 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LMJ37_06160 PF07992 Pyridine nucleotide-disulphide oxidoreductase LMJ37_06165 PF01580 FtsK/SpoIIIE family LMJ37_06165 PF17854 FtsK alpha domain LMJ37_06165 PF09397 Ftsk gamma domain LMJ37_06165 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LMJ37_06175 PF03548 Outer membrane lipoprotein carrier protein LolA LMJ37_06185 PF12002 MgsA AAA+ ATPase C terminal LMJ37_06185 PF00004 ATPase family associated with various cellular activities (AAA) LMJ37_06185 PF16193 AAA C-terminal domain LMJ37_06190 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LMJ37_06195 PF02803 Thiolase, C-terminal domain LMJ37_06195 PF00108 Thiolase, N-terminal domain LMJ37_06200 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LMJ37_06200 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LMJ37_06200 PF00378 Enoyl-CoA hydratase/isomerase LMJ37_06210 PF00334 Nucleoside diphosphate kinase LMJ37_06215 PF04055 Radical SAM superfamily LMJ37_06225 PF13464 Domain of unknown function (DUF4115) LMJ37_06235 PF13360 PQQ-like domain LMJ37_06235 PF01011 PQQ enzyme repeat LMJ37_06240 PF01926 50S ribosome-binding GTPase LMJ37_06240 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LMJ37_06245 PF00994 Probable molybdopterin binding domain LMJ37_06245 PF03454 MoeA C-terminal region (domain IV) LMJ37_06245 PF03453 MoeA N-terminal region (domain I and II) LMJ37_06250 PF00899 ThiF family LMJ37_06280 PF13823 Alcohol dehydrogenase GroES-associated LMJ37_06280 PF08240 Alcohol dehydrogenase GroES-like domain LMJ37_06280 PF00107 Zinc-binding dehydrogenase LMJ37_06290 PF03372 Endonuclease/Exonuclease/phosphatase family LMJ37_06300 PF03454 MoeA C-terminal region (domain IV) LMJ37_06300 PF00994 Probable molybdopterin binding domain LMJ37_06300 PF03453 MoeA N-terminal region (domain I and II) LMJ37_06305 PF12804 MobA-like NTP transferase domain LMJ37_06315 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LMJ37_06315 PF10414 Sirohaem synthase dimerisation region LMJ37_06315 PF14824 Sirohaem biosynthesis protein central LMJ37_06345 PF05974 Domain of unknown function (DUF892) LMJ37_06365 PF00990 Diguanylate cyclase, GGDEF domain LMJ37_06365 PF00563 EAL domain LMJ37_06365 PF08448 PAS fold LMJ37_06365 PF08447 PAS fold LMJ37_06370 PF12951 Passenger-associated-transport-repeat LMJ37_06375 PF00196 Bacterial regulatory proteins, luxR family LMJ37_06375 PF00072 Response regulator receiver domain LMJ37_06380 PF00072 Response regulator receiver domain LMJ37_06380 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_06380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_06380 PF08448 PAS fold LMJ37_06380 PF13426 PAS domain LMJ37_06390 PF00873 AcrB/AcrD/AcrF family LMJ37_06395 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LMJ37_06400 PF03797 Autotransporter beta-domain LMJ37_06400 PF00082 Subtilase family LMJ37_06410 PF13492 GAF domain LMJ37_06410 PF07694 5TMR of 5TMR-LYT LMJ37_06410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_06410 PF06580 Histidine kinase LMJ37_06415 PF04397 LytTr DNA-binding domain LMJ37_06415 PF00072 Response regulator receiver domain LMJ37_06425 PF00144 Beta-lactamase LMJ37_06435 PF07995 Glucose / Sorbosone dehydrogenase LMJ37_06440 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LMJ37_06450 PF09335 SNARE associated Golgi protein LMJ37_06455 PF01494 FAD binding domain LMJ37_06465 PF03621 MbtH-like protein LMJ37_06470 PF00975 Thioesterase domain LMJ37_06490 PF02810 SEC-C motif LMJ37_06490 PF07517 SecA DEAD-like domain LMJ37_06490 PF01043 SecA preprotein cross-linking domain LMJ37_06490 PF07516 SecA Wing and Scaffold domain LMJ37_06495 PF00106 short chain dehydrogenase LMJ37_06500 PF05199 GMC oxidoreductase LMJ37_06500 PF00732 GMC oxidoreductase LMJ37_06505 PF08241 Methyltransferase domain LMJ37_06505 PF12697 Alpha/beta hydrolase family LMJ37_06555 PF01106 NifU-like domain LMJ37_06560 PF01329 Pterin 4 alpha carbinolamine dehydratase LMJ37_06570 PF02535 ZIP Zinc transporter LMJ37_06575 PF11737 Protein of unknown function (DUF3300) LMJ37_06580 PF00849 RNA pseudouridylate synthase LMJ37_06580 PF01479 S4 domain LMJ37_06585 PF00575 S1 RNA binding domain LMJ37_06585 PF12111 Polyribonucleotide phosphorylase C terminal LMJ37_06585 PF10150 Ribonuclease E/G family LMJ37_06590 PF00072 Response regulator receiver domain LMJ37_06590 PF00196 Bacterial regulatory proteins, luxR family LMJ37_06595 PF00581 Rhodanese-like domain LMJ37_06595 PF17773 UPF0176 acylphosphatase like domain LMJ37_06605 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LMJ37_06615 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LMJ37_06615 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LMJ37_06615 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LMJ37_06625 PF17837 4'-phosphopantetheinyl transferase N-terminal domain LMJ37_06625 PF01648 4'-phosphopantetheinyl transferase superfamily LMJ37_06630 PF00501 AMP-binding enzyme LMJ37_06630 PF13193 AMP-binding enzyme C-terminal domain LMJ37_06630 PF00668 Condensation domain LMJ37_06630 PF00550 Phosphopantetheine attachment site LMJ37_06635 PF00668 Condensation domain LMJ37_06635 PF00202 Aminotransferase class-III LMJ37_06635 PF00501 AMP-binding enzyme LMJ37_06635 PF13193 AMP-binding enzyme C-terminal domain LMJ37_06635 PF16197 Ketoacyl-synthetase C-terminal extension LMJ37_06635 PF00109 Beta-ketoacyl synthase, N-terminal domain LMJ37_06635 PF02801 Beta-ketoacyl synthase, C-terminal domain LMJ37_06635 PF00550 Phosphopantetheine attachment site LMJ37_06655 PF01066 CDP-alcohol phosphatidyltransferase LMJ37_06660 PF01541 GIY-YIG catalytic domain LMJ37_06660 PF08459 UvrC Helix-hairpin-helix N-terminal LMJ37_06660 PF02151 UvrB/uvrC motif LMJ37_06670 PF01451 Low molecular weight phosphotyrosine protein phosphatase LMJ37_06675 PF02348 Cytidylyltransferase LMJ37_06680 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LMJ37_06685 PF00664 ABC transporter transmembrane region LMJ37_06685 PF00005 ABC transporter LMJ37_06695 PF01618 MotA/TolQ/ExbB proton channel family LMJ37_06700 PF03772 Competence protein LMJ37_06700 PF00753 Metallo-beta-lactamase superfamily LMJ37_06710 PF00005 ABC transporter LMJ37_06715 PF02687 FtsX-like permease family LMJ37_06715 PF12704 MacB-like periplasmic core domain LMJ37_06725 PF03937 Flavinator of succinate dehydrogenase LMJ37_06730 PF13085 2Fe-2S iron-sulfur cluster binding domain LMJ37_06740 PF00890 FAD binding domain LMJ37_06740 PF02910 Fumarate reductase flavoprotein C-term LMJ37_06745 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LMJ37_06750 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LMJ37_06760 PF17912 MalK OB fold domain LMJ37_06760 PF00005 ABC transporter LMJ37_06765 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LMJ37_06765 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LMJ37_06770 PF02685 Glucokinase LMJ37_06775 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LMJ37_06780 PF00920 Dehydratase family LMJ37_06785 PF01081 KDPG and KHG aldolase LMJ37_06790 PF00873 AcrB/AcrD/AcrF family LMJ37_06795 PF00873 AcrB/AcrD/AcrF family LMJ37_06800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LMJ37_06810 PF00034 Cytochrome c LMJ37_06850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_06850 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_06850 PF09308 LuxQ, periplasmic LMJ37_06850 PF00072 Response regulator receiver domain LMJ37_06855 PF17674 HHH domain LMJ37_06855 PF00575 S1 RNA binding domain LMJ37_06855 PF09371 Tex-like protein N-terminal domain LMJ37_06855 PF16921 Tex protein YqgF-like domain LMJ37_06865 PF00355 Rieske [2Fe-2S] domain LMJ37_06865 PF01266 FAD dependent oxidoreductase LMJ37_06880 PF00561 alpha/beta hydrolase fold LMJ37_06890 PF01066 CDP-alcohol phosphatidyltransferase LMJ37_06910 PF03618 Kinase/pyrophosphorylase LMJ37_06915 PF00391 PEP-utilising enzyme, mobile domain LMJ37_06915 PF02896 PEP-utilising enzyme, TIM barrel domain LMJ37_06915 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LMJ37_06920 PF00924 Mechanosensitive ion channel LMJ37_06920 PF05552 Conserved TM helix LMJ37_06925 PF00929 Exonuclease LMJ37_06930 PF14437 MafB19-like deaminase LMJ37_06935 PF02742 Iron dependent repressor, metal binding and dimerisation domain LMJ37_06935 PF01325 Iron dependent repressor, N-terminal DNA binding domain LMJ37_06940 PF01566 Natural resistance-associated macrophage protein LMJ37_06945 PF00561 alpha/beta hydrolase fold LMJ37_06960 PF05977 Transmembrane secretion effector LMJ37_06965 PF07969 Amidohydrolase family LMJ37_06975 PF00857 Isochorismatase family LMJ37_06995 PF00072 Response regulator receiver domain LMJ37_06995 PF00196 Bacterial regulatory proteins, luxR family LMJ37_07015 PF03466 LysR substrate binding domain LMJ37_07015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMJ37_07020 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LMJ37_07020 PF00361 Proton-conducting membrane transporter LMJ37_07020 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus LMJ37_07025 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) LMJ37_07030 PF13476 AAA domain LMJ37_07045 PF02796 Helix-turn-helix domain of resolvase LMJ37_07045 PF00239 Resolvase, N terminal domain LMJ37_07115 PF13356 Arm DNA-binding domain LMJ37_07115 PF00589 Phage integrase family LMJ37_07120 PF00117 Glutamine amidotransferase class-I LMJ37_07120 PF00958 GMP synthase C terminal domain LMJ37_07120 PF02540 NAD synthase LMJ37_07125 PF00478 IMP dehydrogenase / GMP reductase domain LMJ37_07125 PF00571 CBS domain LMJ37_07130 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LMJ37_07130 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LMJ37_07140 PF00999 Sodium/hydrogen exchanger family LMJ37_07140 PF02254 TrkA-N domain LMJ37_07145 PF00483 Nucleotidyl transferase LMJ37_07150 PF02719 Polysaccharide biosynthesis protein LMJ37_07155 PF00953 Glycosyl transferase family 4 LMJ37_07160 PF18073 Rubredoxin metal binding domain LMJ37_07170 PF00216 Bacterial DNA-binding protein LMJ37_07175 PF00575 S1 RNA binding domain LMJ37_07180 PF02224 Cytidylate kinase LMJ37_07185 PF00444 Ribosomal protein L36 LMJ37_07195 PF04371 Porphyromonas-type peptidyl-arginine deiminase LMJ37_07200 PF00795 Carbon-nitrogen hydrolase LMJ37_07225 PF00528 Binding-protein-dependent transport system inner membrane component LMJ37_07230 PF00528 Binding-protein-dependent transport system inner membrane component LMJ37_07250 PF00356 Bacterial regulatory proteins, lacI family LMJ37_07260 PF03795 YCII-related domain LMJ37_07265 PF02616 Segregation and condensation protein ScpA LMJ37_07270 PF04079 Segregation and condensation complex subunit ScpB LMJ37_07275 PF00849 RNA pseudouridylate synthase LMJ37_07275 PF01479 S4 domain LMJ37_07290 PF00795 Carbon-nitrogen hydrolase LMJ37_07295 PF00155 Aminotransferase class I and II LMJ37_07300 PF00005 ABC transporter LMJ37_07305 PF03379 CcmB protein LMJ37_07310 PF01578 Cytochrome C assembly protein LMJ37_07320 PF03100 CcmE LMJ37_07325 PF01578 Cytochrome C assembly protein LMJ37_07325 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LMJ37_07330 PF08534 Redoxin LMJ37_07335 PF03918 Cytochrome C biogenesis protein LMJ37_07345 PF00561 alpha/beta hydrolase fold LMJ37_07350 PF00313 'Cold-shock' DNA-binding domain LMJ37_07355 PF00664 ABC transporter transmembrane region LMJ37_07355 PF00005 ABC transporter LMJ37_07360 PF00664 ABC transporter transmembrane region LMJ37_07360 PF00005 ABC transporter LMJ37_07365 PF01654 Cytochrome bd terminal oxidase subunit I LMJ37_07370 PF02322 Cytochrome bd terminal oxidase subunit II LMJ37_07390 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain LMJ37_07390 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LMJ37_07400 PF00171 Aldehyde dehydrogenase family LMJ37_07405 PF00696 Amino acid kinase family LMJ37_07405 PF01472 PUA domain LMJ37_07415 PF00206 Lyase LMJ37_07420 PF01118 Semialdehyde dehydrogenase, NAD binding domain LMJ37_07430 PF00696 Amino acid kinase family LMJ37_07430 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase LMJ37_07435 PF07687 Peptidase dimerisation domain LMJ37_07435 PF01546 Peptidase family M20/M25/M40 LMJ37_07445 PF00764 Arginosuccinate synthase LMJ37_07450 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LMJ37_07450 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LMJ37_07460 PF09190 DALR domain LMJ37_07460 PF01406 tRNA synthetases class I (C) catalytic domain LMJ37_07465 PF02657 Fe-S metabolism associated domain LMJ37_07475 PF01258 Prokaryotic dksA/traR C4-type zinc finger LMJ37_07485 PF01809 Putative membrane protein insertion efficiency factor LMJ37_07490 PF01979 Amidohydrolase family LMJ37_07495 PF08460 Bacterial SH3 domain LMJ37_07495 PF01551 Peptidase family M23 LMJ37_07510 PF06751 Ethanolamine ammonia lyase large subunit (EutB) LMJ37_07515 PF05985 Ethanolamine ammonia-lyase light chain (EutC) LMJ37_07525 PF00753 Metallo-beta-lactamase superfamily LMJ37_07555 PF00295 Glycosyl hydrolases family 28 LMJ37_07565 PF13419 Haloacid dehalogenase-like hydrolase LMJ37_07575 PF01979 Amidohydrolase family LMJ37_07585 PF01132 Elongation factor P (EF-P) OB domain LMJ37_07585 PF09285 Elongation factor P, C-terminal LMJ37_07585 PF08207 Elongation factor P (EF-P) KOW-like domain LMJ37_07590 PF04055 Radical SAM superfamily LMJ37_07595 PF00990 Diguanylate cyclase, GGDEF domain LMJ37_07595 PF03707 Bacterial signalling protein N terminal repeat LMJ37_07595 PF13188 PAS domain LMJ37_07595 PF00563 EAL domain LMJ37_07605 PF00588 SpoU rRNA Methylase family LMJ37_07610 PF00459 Inositol monophosphatase family LMJ37_07615 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LMJ37_07615 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LMJ37_07620 PF00545 ribonuclease LMJ37_07630 PF12848 ABC transporter LMJ37_07630 PF16326 ABC transporter C-terminal domain LMJ37_07630 PF00005 ABC transporter LMJ37_07635 PF00270 DEAD/DEAH box helicase LMJ37_07635 PF00271 Helicase conserved C-terminal domain LMJ37_07635 PF03880 DbpA RNA binding domain LMJ37_07640 PF00156 Phosphoribosyl transferase domain LMJ37_07645 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LMJ37_07650 PF00135 Carboxylesterase family LMJ37_07655 PF02798 Glutathione S-transferase, N-terminal domain LMJ37_07655 PF14497 Glutathione S-transferase, C-terminal domain LMJ37_07660 PF00313 'Cold-shock' DNA-binding domain LMJ37_07665 PF07152 YaeQ protein LMJ37_07675 PF00990 Diguanylate cyclase, GGDEF domain LMJ37_07675 PF00072 Response regulator receiver domain LMJ37_07675 PF00563 EAL domain LMJ37_07680 PF01435 Peptidase family M48 LMJ37_07685 PF00749 tRNA synthetases class I (E and Q), catalytic domain LMJ37_07690 PF00106 short chain dehydrogenase LMJ37_07695 PF05233 PHB accumulation regulatory domain LMJ37_07695 PF07879 PHB/PHA accumulation regulator DNA-binding domain LMJ37_07715 PF08676 MutL C terminal dimerisation domain LMJ37_07715 PF01119 DNA mismatch repair protein, C-terminal domain LMJ37_07720 PF01520 N-acetylmuramoyl-L-alanine amidase LMJ37_07720 PF11741 AMIN domain LMJ37_07725 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LMJ37_07730 PF01256 Carbohydrate kinase LMJ37_07730 PF03853 YjeF-related protein N-terminus LMJ37_07735 PF08331 Domain of unknown function (DUF1730) LMJ37_07740 PF02601 Exonuclease VII, large subunit LMJ37_07740 PF13742 OB-fold nucleic acid binding domain LMJ37_07750 PF03781 Sulfatase-modifying factor enzyme 1 LMJ37_07760 PF01612 3'-5' exonuclease LMJ37_07760 PF00570 HRDC domain LMJ37_07765 PF04679 ATP dependent DNA ligase C terminal region LMJ37_07765 PF01068 ATP dependent DNA ligase domain LMJ37_07765 PF13298 DNA polymerase Ligase (LigD) LMJ37_07795 PF01584 CheW-like domain LMJ37_07800 PF02743 Cache domain LMJ37_07800 PF00672 HAMP domain LMJ37_07800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LMJ37_07805 PF02245 Methylpurine-DNA glycosylase (MPG) LMJ37_07810 PF00271 Helicase conserved C-terminal domain LMJ37_07810 PF08494 DEAD/H associated LMJ37_07810 PF00270 DEAD/DEAH box helicase LMJ37_07830 PF04386 Stringent starvation protein B LMJ37_07835 PF02798 Glutathione S-transferase, N-terminal domain LMJ37_07835 PF00043 Glutathione S-transferase, C-terminal domain LMJ37_07840 PF02167 Cytochrome C1 family LMJ37_07845 PF00033 Cytochrome b/b6/petB LMJ37_07845 PF00032 Cytochrome b(C-terminal)/b6/petD LMJ37_07850 PF00355 Rieske [2Fe-2S] domain LMJ37_07850 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal LMJ37_07855 PF01464 Transglycosylase SLT domain LMJ37_07870 PF04055 Radical SAM superfamily LMJ37_07870 PF01938 TRAM domain LMJ37_07870 PF00919 Uncharacterized protein family UPF0004 LMJ37_07875 PF02562 PhoH-like protein LMJ37_07885 PF02130 Uncharacterized protein family UPF0054 LMJ37_07895 PF00571 CBS domain LMJ37_07895 PF03471 Transporter associated domain LMJ37_07910 PF00171 Aldehyde dehydrogenase family LMJ37_07915 PF00528 Binding-protein-dependent transport system inner membrane component LMJ37_07920 PF00528 Binding-protein-dependent transport system inner membrane component LMJ37_07930 PF02321 Outer membrane efflux protein LMJ37_07935 PF07690 Major Facilitator Superfamily LMJ37_07940 PF13533 Biotin-lipoyl like LMJ37_07945 PF13416 Bacterial extracellular solute-binding protein LMJ37_07950 PF00202 Aminotransferase class-III LMJ37_07955 PF00120 Glutamine synthetase, catalytic domain LMJ37_07965 PF00120 Glutamine synthetase, catalytic domain LMJ37_07970 PF01266 FAD dependent oxidoreductase LMJ37_07975 PF00990 Diguanylate cyclase, GGDEF domain LMJ37_07975 PF00072 Response regulator receiver domain LMJ37_07980 PF01814 Hemerythrin HHE cation binding domain LMJ37_07985 PF07690 Major Facilitator Superfamily LMJ37_07985 PF00083 Sugar (and other) transporter LMJ37_07995 PF00384 Molybdopterin oxidoreductase LMJ37_08000 PF02634 FdhD/NarQ family LMJ37_08005 PF07690 Major Facilitator Superfamily LMJ37_08010 PF00202 Aminotransferase class-III LMJ37_08020 PF04286 Protein of unknown function (DUF445) LMJ37_08025 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_08025 PF01627 Hpt domain LMJ37_08025 PF00072 Response regulator receiver domain LMJ37_08025 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LMJ37_08025 PF00672 HAMP domain LMJ37_08025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_08030 PF00072 Response regulator receiver domain LMJ37_08035 PF07690 Major Facilitator Superfamily LMJ37_08050 PF05088 Bacterial NAD-glutamate dehydrogenase LMJ37_08060 PF00529 HlyD membrane-fusion protein of T1SS LMJ37_08060 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LMJ37_08065 PF00873 AcrB/AcrD/AcrF family LMJ37_08075 PF00356 Bacterial regulatory proteins, lacI family LMJ37_08080 PF05524 PEP-utilising enzyme, N-terminal LMJ37_08080 PF00391 PEP-utilising enzyme, mobile domain LMJ37_08080 PF02896 PEP-utilising enzyme, TIM barrel domain LMJ37_08080 PF00381 PTS HPr component phosphorylation site LMJ37_08080 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LMJ37_08085 PF00294 pfkB family carbohydrate kinase LMJ37_08090 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LMJ37_08100 PF01593 Flavin containing amine oxidoreductase LMJ37_08110 PF07549 SecD/SecF GG Motif LMJ37_08110 PF02355 Protein export membrane protein LMJ37_08115 PF02355 Protein export membrane protein LMJ37_08115 PF07549 SecD/SecF GG Motif LMJ37_08115 PF13721 SecD export protein N-terminal TM region LMJ37_08120 PF02699 Preprotein translocase subunit LMJ37_08125 PF01702 Queuine tRNA-ribosyltransferase LMJ37_08130 PF02547 Queuosine biosynthesis protein LMJ37_08170 PF02927 Cellulase N-terminal ig-like domain LMJ37_08170 PF00759 Glycosyl hydrolase family 9 LMJ37_08180 PF00037 4Fe-4S binding domain LMJ37_08190 PF01467 Cytidylyltransferase-like LMJ37_08200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_08200 PF00183 Hsp90 protein LMJ37_08250 PF00593 TonB dependent receptor LMJ37_08250 PF07715 TonB-dependent Receptor Plug Domain LMJ37_08260 PF04616 Glycosyl hydrolases family 43 LMJ37_08265 PF07532 Bacterial Ig-like domain (group 4) LMJ37_08280 PF00082 Subtilase family LMJ37_08280 PF09286 Pro-kumamolisin, activation domain LMJ37_08305 PF13520 Amino acid permease LMJ37_08320 PF00557 Metallopeptidase family M24 LMJ37_08320 PF01321 Creatinase/Prolidase N-terminal domain LMJ37_08325 PF00171 Aldehyde dehydrogenase family LMJ37_08330 PF00701 Dihydrodipicolinate synthetase family LMJ37_08335 PF04324 BFD-like [2Fe-2S] binding domain LMJ37_08335 PF07992 Pyridine nucleotide-disulphide oxidoreductase LMJ37_08345 PF01266 FAD dependent oxidoreductase LMJ37_08350 PF05544 Proline racemase LMJ37_08360 PF00448 SRP54-type protein, GTPase domain LMJ37_08360 PF02881 SRP54-type protein, helical bundle domain LMJ37_08365 PF00633 Helix-hairpin-helix motif LMJ37_08365 PF10576 Iron-sulfur binding domain of endonuclease III LMJ37_08365 PF00730 HhH-GPD superfamily base excision DNA repair protein LMJ37_08365 PF14815 NUDIX domain LMJ37_08370 PF04362 Bacterial Fe(2+) trafficking LMJ37_08375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_08375 PF00072 Response regulator receiver domain LMJ37_08375 PF13426 PAS domain LMJ37_08405 PF08212 Lipocalin-like domain LMJ37_08420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LMJ37_08420 PF12806 Acetyl-CoA dehydrogenase C-terminal like LMJ37_08420 PF02770 Acyl-CoA dehydrogenase, middle domain LMJ37_08420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LMJ37_08430 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LMJ37_08430 PF02780 Transketolase, C-terminal domain LMJ37_08430 PF02779 Transketolase, pyrimidine binding domain LMJ37_08450 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family LMJ37_08455 PF16123 Hydroxyacylglutathione hydrolase C-terminus LMJ37_08455 PF00753 Metallo-beta-lactamase superfamily LMJ37_08460 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LMJ37_08460 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LMJ37_08475 PF03808 Glycosyl transferase WecB/TagA/CpsF family LMJ37_08490 PF14667 Polysaccharide biosynthesis C-terminal domain LMJ37_08500 PF13439 Glycosyltransferase Family 4 LMJ37_08500 PF00534 Glycosyl transferases group 1 LMJ37_08520 PF02397 Bacterial sugar transferase LMJ37_08545 PF13411 MerR HTH family regulatory protein LMJ37_08550 PF00216 Bacterial DNA-binding protein LMJ37_08555 PF01588 Putative tRNA binding domain LMJ37_08555 PF03147 Ferredoxin-fold anticodon binding domain LMJ37_08555 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LMJ37_08555 PF03484 tRNA synthetase B5 domain LMJ37_08555 PF03483 B3/4 domain LMJ37_08565 PF00453 Ribosomal protein L20 LMJ37_08570 PF01632 Ribosomal protein L35 LMJ37_08575 PF05198 Translation initiation factor IF-3, N-terminal domain LMJ37_08575 PF00707 Translation initiation factor IF-3, C-terminal domain LMJ37_08580 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LMJ37_08580 PF02824 TGS domain LMJ37_08580 PF03129 Anticodon binding domain LMJ37_08580 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LMJ37_08585 PF00356 Bacterial regulatory proteins, lacI family LMJ37_08590 PF00128 Alpha amylase, catalytic domain LMJ37_08590 PF00686 Starch binding domain LMJ37_08605 PF14508 Glycosyl-hydrolase 97 N-terminal LMJ37_08605 PF10566 Glycoside hydrolase 97 LMJ37_08605 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation LMJ37_08620 PF00128 Alpha amylase, catalytic domain LMJ37_08735 PF03135 CagE, TrbE, VirB family, component of type IV transporter system LMJ37_08740 PF05101 Type IV secretory pathway, VirB3-like protein LMJ37_08750 PF01464 Transglycosylase SLT domain LMJ37_08755 PF00437 Type II/IV secretion system protein LMJ37_08760 PF03743 Bacterial conjugation TrbI-like protein LMJ37_08780 PF02534 Type IV secretory system Conjugative DNA transfer LMJ37_08795 PF17757 UvrB interaction domain LMJ37_08795 PF12344 Ultra-violet resistance protein B LMJ37_08795 PF02151 UvrB/uvrC motif LMJ37_08795 PF04851 Type III restriction enzyme, res subunit LMJ37_08795 PF00271 Helicase conserved C-terminal domain LMJ37_08815 PF05567 Neisseria PilC beta-propeller domain LMJ37_08835 PF07963 Prokaryotic N-terminal methylation motif LMJ37_08835 PF00114 Pilin (bacterial filament) LMJ37_08840 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases LMJ37_08840 PF11892 Domain of unknown function (DUF3412) LMJ37_08840 PF03641 Possible lysine decarboxylase LMJ37_08845 PF00593 TonB dependent receptor LMJ37_08850 PF01914 MarC family integral membrane protein LMJ37_08860 PF00462 Glutaredoxin LMJ37_08865 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LMJ37_08865 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LMJ37_08870 PF02222 ATP-grasp domain LMJ37_08870 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LMJ37_08875 PF00731 AIR carboxylase LMJ37_08885 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LMJ37_08885 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LMJ37_08895 PF03725 3' exoribonuclease family, domain 2 LMJ37_08895 PF00013 KH domain LMJ37_08895 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LMJ37_08895 PF01138 3' exoribonuclease family, domain 1 LMJ37_08895 PF00575 S1 RNA binding domain LMJ37_08900 PF00312 Ribosomal protein S15 LMJ37_08905 PF01509 TruB family pseudouridylate synthase (N terminal domain) LMJ37_08905 PF16198 tRNA pseudouridylate synthase B C-terminal domain LMJ37_08905 PF09157 Pseudouridine synthase II TruB, C-terminal LMJ37_08910 PF02033 Ribosome-binding factor A LMJ37_08915 PF00009 Elongation factor Tu GTP binding domain LMJ37_08915 PF11987 Translation-initiation factor 2 LMJ37_08915 PF08364 Bacterial translation initiation factor IF-2 associated region LMJ37_08915 PF04760 Translation initiation factor IF-2, N-terminal region LMJ37_08920 PF08529 NusA N-terminal domain LMJ37_08920 PF13184 NusA-like KH domain LMJ37_08920 PF00575 S1 RNA binding domain LMJ37_08925 PF17384 RimP C-terminal SH3 domain LMJ37_08925 PF02576 RimP N-terminal domain LMJ37_08935 PF00361 Proton-conducting membrane transporter LMJ37_08940 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus LMJ37_08940 PF00361 Proton-conducting membrane transporter LMJ37_08945 PF00361 Proton-conducting membrane transporter LMJ37_08945 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LMJ37_08950 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LMJ37_08955 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LMJ37_08960 PF12838 4Fe-4S dicluster domain LMJ37_08965 PF00146 NADH dehydrogenase LMJ37_08970 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LMJ37_08970 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal LMJ37_08970 PF00384 Molybdopterin oxidoreductase LMJ37_08975 PF10531 SLBB domain LMJ37_08975 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LMJ37_08975 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LMJ37_08985 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LMJ37_08990 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LMJ37_08995 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LMJ37_09000 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LMJ37_09015 PF00121 Triosephosphate isomerase LMJ37_09020 PF00106 short chain dehydrogenase LMJ37_09035 PF03707 Bacterial signalling protein N terminal repeat LMJ37_09035 PF00990 Diguanylate cyclase, GGDEF domain LMJ37_09035 PF00563 EAL domain LMJ37_09050 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LMJ37_09050 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LMJ37_09050 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LMJ37_09050 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LMJ37_09055 PF01039 Carboxyl transferase domain LMJ37_09055 PF17848 Acetyl-coA carboxylase zinc finger domain LMJ37_09060 PF00290 Tryptophan synthase alpha chain LMJ37_09070 PF00291 Pyridoxal-phosphate dependent enzyme LMJ37_09075 PF03466 LysR substrate binding domain LMJ37_09075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMJ37_09080 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LMJ37_09085 PF01416 tRNA pseudouridine synthase LMJ37_09105 PF02774 Semialdehyde dehydrogenase, dimerisation domain LMJ37_09105 PF01118 Semialdehyde dehydrogenase, NAD binding domain LMJ37_09110 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LMJ37_09110 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LMJ37_09115 PF01264 Chorismate synthase LMJ37_09120 PF05175 Methyltransferase small domain LMJ37_09125 PF02630 SCO1/SenC LMJ37_09130 PF02666 Phosphatidylserine decarboxylase LMJ37_09140 PF05872 Bacterial protein of unknown function (DUF853) LMJ37_09145 PF00293 NUDIX domain LMJ37_09160 PF03449 Transcription elongation factor, N-terminal LMJ37_09160 PF01272 Transcription elongation factor, GreA/GreB, C-term LMJ37_09165 PF04055 Radical SAM superfamily LMJ37_09165 PF18693 TRAM domain LMJ37_09165 PF00919 Uncharacterized protein family UPF0004 LMJ37_09175 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LMJ37_09220 PF13175 AAA ATPase domain LMJ37_09225 PF00149 Calcineurin-like phosphoesterase LMJ37_09225 PF12320 Type 5 capsule protein repressor C-terminal domain LMJ37_09235 PF01738 Dienelactone hydrolase family LMJ37_09255 PF00692 dUTPase LMJ37_09260 PF10609 NUBPL iron-transfer P-loop NTPase LMJ37_09265 PF00593 TonB dependent receptor LMJ37_09265 PF07715 TonB-dependent Receptor Plug Domain LMJ37_09280 PF05649 Peptidase family M13 LMJ37_09280 PF01431 Peptidase family M13 LMJ37_09285 PF01431 Peptidase family M13 LMJ37_09285 PF05649 Peptidase family M13 LMJ37_09300 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LMJ37_09305 PF07992 Pyridine nucleotide-disulphide oxidoreductase LMJ37_09305 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LMJ37_09310 PF01266 FAD dependent oxidoreductase LMJ37_09315 PF04235 Protein of unknown function (DUF418) LMJ37_09320 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LMJ37_09325 PF00877 NlpC/P60 family LMJ37_09330 PF00877 NlpC/P60 family LMJ37_09345 PF00375 Sodium:dicarboxylate symporter family LMJ37_09350 PF00245 Alkaline phosphatase LMJ37_09355 PF01171 PP-loop family LMJ37_09355 PF09179 TilS substrate binding domain LMJ37_09355 PF11734 TilS substrate C-terminal domain LMJ37_09360 PF02609 Exonuclease VII small subunit LMJ37_09365 PF00348 Polyprenyl synthetase LMJ37_09370 PF14521 Lysine-specific metallo-endopeptidase LMJ37_09380 PF01523 Putative modulator of DNA gyrase LMJ37_09385 PF04751 Protein of unknown function (DUF615) LMJ37_09390 PF01523 Putative modulator of DNA gyrase LMJ37_09400 PF13502 AsmA-like C-terminal region LMJ37_09400 PF13116 Protein of unknown function LMJ37_09405 PF10150 Ribonuclease E/G family LMJ37_09405 PF00575 S1 RNA binding domain LMJ37_09410 PF02545 Maf-like protein LMJ37_09415 PF04402 Protein of unknown function (DUF541) LMJ37_09430 PF02590 Predicted SPOUT methyltransferase LMJ37_09445 PF01467 Cytidylyltransferase-like LMJ37_09460 PF08264 Anticodon-binding domain of tRNA LMJ37_09460 PF00133 tRNA synthetases class I (I, L, M and V) LMJ37_09460 PF13603 Leucyl-tRNA synthetase, Domain 2 LMJ37_09470 PF00085 Thioredoxin LMJ37_09495 PF04070 Domain of unknown function (DUF378) LMJ37_09500 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LMJ37_09510 PF03466 LysR substrate binding domain LMJ37_09510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMJ37_09540 PF00005 ABC transporter LMJ37_09540 PF00664 ABC transporter transmembrane region LMJ37_09555 PF00873 AcrB/AcrD/AcrF family LMJ37_09570 PF02321 Outer membrane efflux protein LMJ37_09575 PF00486 Transcriptional regulatory protein, C terminal LMJ37_09575 PF00072 Response regulator receiver domain LMJ37_09580 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_09580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_09580 PF00672 HAMP domain LMJ37_09585 PF00999 Sodium/hydrogen exchanger family LMJ37_09590 PF00144 Beta-lactamase LMJ37_09595 PF03737 Aldolase/RraA LMJ37_09610 PF00990 Diguanylate cyclase, GGDEF domain LMJ37_09615 PF01479 S4 domain LMJ37_09615 PF00849 RNA pseudouridylate synthase LMJ37_09620 PF00563 EAL domain LMJ37_09620 PF08448 PAS fold LMJ37_09620 PF00990 Diguanylate cyclase, GGDEF domain LMJ37_09625 PF03880 DbpA RNA binding domain LMJ37_09625 PF00271 Helicase conserved C-terminal domain LMJ37_09625 PF00270 DEAD/DEAH box helicase LMJ37_09675 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LMJ37_09675 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LMJ37_09685 PF00654 Voltage gated chloride channel LMJ37_09690 PF00107 Zinc-binding dehydrogenase LMJ37_09690 PF08240 Alcohol dehydrogenase GroES-like domain LMJ37_09710 PF00593 TonB dependent receptor LMJ37_09710 PF07715 TonB-dependent Receptor Plug Domain LMJ37_09725 PF13406 Transglycosylase SLT domain LMJ37_09745 PF01129 NAD:arginine ADP-ribosyltransferase LMJ37_09770 PF00082 Subtilase family LMJ37_09770 PF01483 Proprotein convertase P-domain LMJ37_09780 PF01483 Proprotein convertase P-domain LMJ37_09780 PF00082 Subtilase family LMJ37_09790 PF00248 Aldo/keto reductase family LMJ37_09795 PF07690 Major Facilitator Superfamily LMJ37_09800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMJ37_09800 PF03466 LysR substrate binding domain LMJ37_09805 PF06719 AraC-type transcriptional regulator N-terminus LMJ37_09805 PF12833 Helix-turn-helix domain LMJ37_09815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMJ37_09815 PF03466 LysR substrate binding domain LMJ37_09820 PF00248 Aldo/keto reductase family LMJ37_09825 PF16859 Tetracyclin repressor-like, C-terminal domain LMJ37_09825 PF00440 Bacterial regulatory proteins, tetR family LMJ37_09830 PF02321 Outer membrane efflux protein LMJ37_09835 PF00873 AcrB/AcrD/AcrF family LMJ37_09840 PF00529 HlyD membrane-fusion protein of T1SS LMJ37_09840 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LMJ37_09850 PF01475 Ferric uptake regulator family LMJ37_09855 PF00749 tRNA synthetases class I (E and Q), catalytic domain LMJ37_09880 PF06123 Inner membrane protein CreD LMJ37_09895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_09895 PF00672 HAMP domain LMJ37_09895 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_09900 PF00072 Response regulator receiver domain LMJ37_09900 PF00486 Transcriptional regulatory protein, C terminal LMJ37_09905 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LMJ37_09915 PF02559 CarD-like/TRCF domain LMJ37_09915 PF00270 DEAD/DEAH box helicase LMJ37_09915 PF17757 UvrB interaction domain LMJ37_09915 PF03461 TRCF domain LMJ37_09915 PF00271 Helicase conserved C-terminal domain LMJ37_09925 PF01584 CheW-like domain LMJ37_09925 PF09078 CheY binding LMJ37_09925 PF01627 Hpt domain LMJ37_09925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_09925 PF02895 Signal transducing histidine kinase, homodimeric domain LMJ37_09930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LMJ37_09930 PF02203 Tar ligand binding domain homologue LMJ37_09930 PF00672 HAMP domain LMJ37_09935 PF01584 CheW-like domain LMJ37_09940 PF13426 PAS domain LMJ37_09940 PF00990 Diguanylate cyclase, GGDEF domain LMJ37_09940 PF00563 EAL domain LMJ37_09945 PF03705 CheR methyltransferase, all-alpha domain LMJ37_09945 PF01739 CheR methyltransferase, SAM binding domain LMJ37_09950 PF01339 CheB methylesterase LMJ37_09950 PF00072 Response regulator receiver domain LMJ37_09955 PF13091 PLD-like domain LMJ37_09960 PF01431 Peptidase family M13 LMJ37_09960 PF05649 Peptidase family M13 LMJ37_09970 PF00300 Histidine phosphatase superfamily (branch 1) LMJ37_09975 PF04493 Endonuclease V LMJ37_09985 PF02678 Pirin LMJ37_09985 PF05726 Pirin C-terminal cupin domain LMJ37_10000 PF05726 Pirin C-terminal cupin domain LMJ37_10000 PF02678 Pirin LMJ37_10005 PF02554 Carbon starvation protein CstA LMJ37_10005 PF13722 5TM C-terminal transporter carbon starvation CstA LMJ37_10045 PF02625 XdhC and CoxI family LMJ37_10045 PF13478 XdhC Rossmann domain LMJ37_10050 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LMJ37_10050 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LMJ37_10055 PF03450 CO dehydrogenase flavoprotein C-terminal domain LMJ37_10055 PF00941 FAD binding domain in molybdopterin dehydrogenase LMJ37_10060 PF10518 TAT (twin-arginine translocation) pathway signal sequence LMJ37_10060 PF01799 [2Fe-2S] binding domain LMJ37_10060 PF00111 2Fe-2S iron-sulfur cluster binding domain LMJ37_10065 PF02801 Beta-ketoacyl synthase, C-terminal domain LMJ37_10065 PF14765 Polyketide synthase dehydratase LMJ37_10065 PF00550 Phosphopantetheine attachment site LMJ37_10065 PF00109 Beta-ketoacyl synthase, N-terminal domain LMJ37_10065 PF08659 KR domain LMJ37_10065 PF09277 Erythronolide synthase, docking LMJ37_10065 PF08990 Erythronolide synthase docking LMJ37_10065 PF08240 Alcohol dehydrogenase GroES-like domain LMJ37_10065 PF00698 Acyl transferase domain LMJ37_10065 PF16197 Ketoacyl-synthetase C-terminal extension LMJ37_10070 PF00563 EAL domain LMJ37_10070 PF01590 GAF domain LMJ37_10070 PF00990 Diguanylate cyclase, GGDEF domain LMJ37_10070 PF00360 Phytochrome region LMJ37_10075 PF00436 Single-strand binding protein family LMJ37_10080 PF00348 Polyprenyl synthetase LMJ37_10090 PF02875 Mur ligase family, glutamate ligase domain LMJ37_10090 PF08245 Mur ligase middle domain LMJ37_10105 PF01842 ACT domain LMJ37_10105 PF00696 Amino acid kinase family LMJ37_10110 PF02567 Phenazine biosynthesis-like protein LMJ37_10115 PF02567 Phenazine biosynthesis-like protein LMJ37_10125 PF02566 OsmC-like protein LMJ37_10130 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LMJ37_10130 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LMJ37_10135 PF03652 Holliday junction resolvase LMJ37_10140 PF02622 Uncharacterized ACR, COG1678 LMJ37_10145 PF00958 GMP synthase C terminal domain LMJ37_10145 PF13673 Acetyltransferase (GNAT) domain LMJ37_10145 PF13302 Acetyltransferase (GNAT) domain LMJ37_10145 PF00117 Glutamine amidotransferase class-I LMJ37_10145 PF03352 Methyladenine glycosylase LMJ37_10160 PF00437 Type II/IV secretion system protein LMJ37_10165 PF00437 Type II/IV secretion system protein LMJ37_10170 PF01168 Alanine racemase, N-terminal domain LMJ37_10175 PF14748 Pyrroline-5-carboxylate reductase dimerisation LMJ37_10175 PF03807 NADP oxidoreductase coenzyme F420-dependent LMJ37_10185 PF01551 Peptidase family M23 LMJ37_10205 PF01965 DJ-1/PfpI family LMJ37_10215 PF02082 Transcriptional regulator LMJ37_10220 PF01458 Uncharacterized protein family (UPF0051) LMJ37_10225 PF00005 ABC transporter LMJ37_10230 PF01458 Uncharacterized protein family (UPF0051) LMJ37_10235 PF00266 Aminotransferase class-V LMJ37_10245 PF00355 Rieske [2Fe-2S] domain LMJ37_10250 PF07715 TonB-dependent Receptor Plug Domain LMJ37_10250 PF00593 TonB dependent receptor LMJ37_10255 PF13640 2OG-Fe(II) oxygenase superfamily LMJ37_10255 PF18331 PKHD-type hydroxylase C-terminal domain LMJ37_10280 PF02424 ApbE family LMJ37_10285 PF00175 Oxidoreductase NAD-binding domain LMJ37_10285 PF00258 Flavodoxin LMJ37_10285 PF00667 FAD binding domain LMJ37_10315 PF01636 Phosphotransferase enzyme family LMJ37_10320 PF00483 Nucleotidyl transferase LMJ37_10325 PF00308 Bacterial dnaA protein LMJ37_10330 PF01594 AI-2E family transporter LMJ37_10340 PF00586 AIR synthase related protein, N-terminal domain LMJ37_10340 PF02769 AIR synthase related protein, C-terminal domain LMJ37_10350 PF00551 Formyl transferase LMJ37_10370 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LMJ37_10375 PF01722 BolA-like protein LMJ37_10380 PF00571 CBS domain LMJ37_10380 PF01380 SIS domain LMJ37_10395 PF03968 OstA-like protein LMJ37_10400 PF00005 ABC transporter LMJ37_10405 PF04552 Sigma-54, DNA binding domain LMJ37_10405 PF00309 Sigma-54 factor, Activator interacting domain (AID) LMJ37_10405 PF04963 Sigma-54 factor, core binding domain LMJ37_10410 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LMJ37_10415 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LMJ37_10420 PF02603 HPr Serine kinase N terminus LMJ37_10420 PF07475 HPr Serine kinase C-terminal domain LMJ37_10425 PF03668 P-loop ATPase protein family LMJ37_10435 PF00381 PTS HPr component phosphorylation site LMJ37_10440 PF05524 PEP-utilising enzyme, N-terminal LMJ37_10440 PF00391 PEP-utilising enzyme, mobile domain LMJ37_10440 PF02896 PEP-utilising enzyme, TIM barrel domain LMJ37_10445 PF03448 MgtE intracellular N domain LMJ37_10445 PF01769 Divalent cation transporter LMJ37_10445 PF00571 CBS domain LMJ37_10450 PF00756 Putative esterase LMJ37_10460 PF02322 Cytochrome bd terminal oxidase subunit II LMJ37_10465 PF01654 Cytochrome bd terminal oxidase subunit I LMJ37_10475 PF00324 Amino acid permease LMJ37_10480 PF00544 Pectate lyase LMJ37_10485 PF00561 alpha/beta hydrolase fold LMJ37_10495 PF00196 Bacterial regulatory proteins, luxR family LMJ37_10505 PF00324 Amino acid permease LMJ37_10525 PF12706 Beta-lactamase superfamily domain LMJ37_10530 PF04820 Tryptophan halogenase LMJ37_10570 PF00376 MerR family regulatory protein LMJ37_10570 PF09278 MerR, DNA binding LMJ37_10585 PF03738 Glutathionylspermidine synthase preATP-grasp LMJ37_10610 PF04012 PspA/IM30 family LMJ37_10620 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LMJ37_10620 PF01243 Pyridoxamine 5'-phosphate oxidase LMJ37_10625 PF01202 Shikimate kinase LMJ37_10630 PF01761 3-dehydroquinate synthase LMJ37_10640 PF01208 Uroporphyrinogen decarboxylase (URO-D) LMJ37_10645 PF07690 Major Facilitator Superfamily LMJ37_10650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_10650 PF01627 Hpt domain LMJ37_10650 PF00072 Response regulator receiver domain LMJ37_10650 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_10650 PF17149 Periplasmic sensor domain found in signal transduction proteins LMJ37_10650 PF00672 HAMP domain LMJ37_10655 PF17149 Periplasmic sensor domain found in signal transduction proteins LMJ37_10655 PF00672 HAMP domain LMJ37_10655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_10655 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_10655 PF01627 Hpt domain LMJ37_10655 PF00072 Response regulator receiver domain LMJ37_10665 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_10665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_10665 PF01627 Hpt domain LMJ37_10665 PF00072 Response regulator receiver domain LMJ37_10670 PF04264 YceI-like domain LMJ37_10690 PF03315 Serine dehydratase beta chain LMJ37_10690 PF03313 Serine dehydratase alpha chain LMJ37_10695 PF00561 alpha/beta hydrolase fold LMJ37_10700 PF00696 Amino acid kinase family LMJ37_10700 PF00742 Homoserine dehydrogenase LMJ37_10700 PF03447 Homoserine dehydrogenase, NAD binding domain LMJ37_10705 PF01053 Cys/Met metabolism PLP-dependent enzyme LMJ37_10710 PF00561 alpha/beta hydrolase fold LMJ37_10715 PF01551 Peptidase family M23 LMJ37_10715 PF01476 LysM domain LMJ37_10715 PF08525 Opacity-associated protein A N-terminal motif LMJ37_10720 PF00009 Elongation factor Tu GTP binding domain LMJ37_10720 PF16658 Class II release factor RF3, C-terminal domain LMJ37_10725 PF03006 Haemolysin-III related LMJ37_10730 PF05170 AsmA family LMJ37_10735 PF00478 IMP dehydrogenase / GMP reductase domain LMJ37_10735 PF00571 CBS domain LMJ37_10740 PF00535 Glycosyl transferase family 2 LMJ37_10745 PF00912 Transglycosylase LMJ37_10750 PF01430 Hsp33 protein LMJ37_10760 PF07715 TonB-dependent Receptor Plug Domain LMJ37_10760 PF00593 TonB dependent receptor LMJ37_10765 PF00440 Bacterial regulatory proteins, tetR family LMJ37_10770 PF00561 alpha/beta hydrolase fold LMJ37_10775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LMJ37_10775 PF09317 Domain of unknown function (DUF1974) LMJ37_10775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LMJ37_10805 PF01597 Glycine cleavage H-protein LMJ37_10810 PF01571 Aminomethyltransferase folate-binding domain LMJ37_10810 PF08669 Glycine cleavage T-protein C-terminal barrel domain LMJ37_10830 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LMJ37_10835 PF03819 MazG nucleotide pyrophosphohydrolase domain LMJ37_10840 PF00459 Inositol monophosphatase family LMJ37_10845 PF00293 NUDIX domain LMJ37_10850 PF00202 Aminotransferase class-III LMJ37_10855 PF04452 RNA methyltransferase LMJ37_10860 PF02685 Glucokinase LMJ37_10875 PF00704 Glycosyl hydrolases family 18 LMJ37_10875 PF01476 LysM domain LMJ37_10880 PF00728 Glycosyl hydrolase family 20, catalytic domain LMJ37_10880 PF02838 Glycosyl hydrolase family 20, domain 2 LMJ37_10880 PF07691 PA14 domain LMJ37_10890 PF14310 Fibronectin type III-like domain LMJ37_10890 PF07691 PA14 domain LMJ37_10890 PF01915 Glycosyl hydrolase family 3 C-terminal domain LMJ37_10890 PF00933 Glycosyl hydrolase family 3 N terminal domain LMJ37_10900 PF01301 Glycosyl hydrolases family 35 LMJ37_10905 PF13520 Amino acid permease LMJ37_10915 PF02056 Family 4 glycosyl hydrolase LMJ37_10915 PF11975 Family 4 glycosyl hydrolase C-terminal domain LMJ37_10925 PF17678 Glycosyl hydrolase family 92 N-terminal domain LMJ37_10925 PF07971 Glycosyl hydrolase family 92 LMJ37_10930 PF01301 Glycosyl hydrolases family 35 LMJ37_10960 PF03932 CutC family LMJ37_10965 PF01112 Asparaginase LMJ37_10975 PF13302 Acetyltransferase (GNAT) domain LMJ37_10990 PF02895 Signal transducing histidine kinase, homodimeric domain LMJ37_10990 PF00072 Response regulator receiver domain LMJ37_10990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_10990 PF01584 CheW-like domain LMJ37_10990 PF01627 Hpt domain LMJ37_10995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LMJ37_10995 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LMJ37_11000 PF01584 CheW-like domain LMJ37_11005 PF00072 Response regulator receiver domain LMJ37_11010 PF00072 Response regulator receiver domain LMJ37_11015 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LMJ37_11015 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LMJ37_11025 PF03747 ADP-ribosylglycohydrolase LMJ37_11030 PF00814 Glycoprotease family LMJ37_11035 PF13307 Helicase C-terminal domain LMJ37_11035 PF04851 Type III restriction enzyme, res subunit LMJ37_11045 PF00912 Transglycosylase LMJ37_11045 PF14814 Bifunctional transglycosylase second domain LMJ37_11045 PF00905 Penicillin binding protein transpeptidase domain LMJ37_11050 PF00535 Glycosyl transferase family 2 LMJ37_11060 PF13291 ACT domain LMJ37_11060 PF04607 Region found in RelA / SpoT proteins LMJ37_11060 PF02824 TGS domain LMJ37_11070 PF12706 Beta-lactamase superfamily domain LMJ37_11075 PF03070 TENA/THI-4/PQQC family LMJ37_11080 PF05402 Coenzyme PQQ synthesis protein D (PqqD) LMJ37_11085 PF04055 Radical SAM superfamily LMJ37_11085 PF13186 Iron-sulfur cluster-binding domain LMJ37_11100 PF02685 Glucokinase LMJ37_11115 PF00270 DEAD/DEAH box helicase LMJ37_11115 PF11898 Domain of unknown function (DUF3418) LMJ37_11115 PF04408 Helicase associated domain (HA2) LMJ37_11115 PF00271 Helicase conserved C-terminal domain LMJ37_11115 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LMJ37_11120 PF00210 Ferritin-like domain LMJ37_11125 PF00270 DEAD/DEAH box helicase LMJ37_11125 PF09382 RQC domain LMJ37_11125 PF00271 Helicase conserved C-terminal domain LMJ37_11125 PF16124 RecQ zinc-binding LMJ37_11125 PF00570 HRDC domain LMJ37_11155 PF00672 HAMP domain LMJ37_11155 PF02203 Tar ligand binding domain homologue LMJ37_11155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LMJ37_11160 PF01810 LysE type translocator LMJ37_11165 PF03466 LysR substrate binding domain LMJ37_11165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMJ37_11175 PF13426 PAS domain LMJ37_11175 PF07536 HWE histidine kinase LMJ37_11175 PF13581 Histidine kinase-like ATPase domain LMJ37_11180 PF06508 Queuosine biosynthesis protein QueC LMJ37_11190 PF04055 Radical SAM superfamily LMJ37_11200 PF00691 OmpA family LMJ37_11205 PF07676 WD40-like Beta Propeller Repeat LMJ37_11205 PF04052 TolB amino-terminal domain LMJ37_11215 PF02472 Biopolymer transport protein ExbD/TolR LMJ37_11220 PF01618 MotA/TolQ/ExbB proton channel family LMJ37_11225 PF03061 Thioesterase superfamily LMJ37_11230 PF05496 Holliday junction DNA helicase RuvB P-loop domain LMJ37_11230 PF17864 RuvB AAA lid domain LMJ37_11230 PF05491 RuvB C-terminal winged helix domain LMJ37_11240 PF02705 K+ potassium transporter LMJ37_11245 PF07499 RuvA, C-terminal domain LMJ37_11245 PF01330 RuvA N terminal domain LMJ37_11250 PF02075 Crossover junction endodeoxyribonuclease RuvC LMJ37_11255 PF01709 Transcriptional regulator LMJ37_11270 PF02938 GAD domain LMJ37_11270 PF00152 tRNA synthetases class II (D, K and N) LMJ37_11270 PF01336 OB-fold nucleic acid binding domain LMJ37_11325 PF01936 NYN domain LMJ37_11325 PF09722 Protein of unknown function (DUF2384) LMJ37_11350 PF01936 NYN domain LMJ37_11350 PF09722 Protein of unknown function (DUF2384) LMJ37_11375 PF00156 Phosphoribosyl transferase domain LMJ37_11395 PF13406 Transglycosylase SLT domain LMJ37_11410 PF07690 Major Facilitator Superfamily LMJ37_11420 PF04185 Phosphoesterase family LMJ37_11420 PF05506 Domain of unknown function (DUF756) LMJ37_11440 PF03466 LysR substrate binding domain LMJ37_11440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMJ37_11450 PF12848 ABC transporter LMJ37_11450 PF00005 ABC transporter LMJ37_11455 PF00593 TonB dependent receptor LMJ37_11455 PF07715 TonB-dependent Receptor Plug Domain LMJ37_11465 PF00593 TonB dependent receptor LMJ37_11465 PF07715 TonB-dependent Receptor Plug Domain LMJ37_11470 PF00593 TonB dependent receptor LMJ37_11470 PF07715 TonB-dependent Receptor Plug Domain LMJ37_11475 PF00067 Cytochrome P450 LMJ37_11480 PF00999 Sodium/hydrogen exchanger family LMJ37_11480 PF02254 TrkA-N domain LMJ37_11505 PF07715 TonB-dependent Receptor Plug Domain LMJ37_11505 PF07660 Secretin and TonB N terminus short domain LMJ37_11505 PF00593 TonB dependent receptor LMJ37_11515 PF06276 Ferric iron reductase FhuF-like transporter LMJ37_11515 PF04183 IucA / IucC family LMJ37_11520 PF07690 Major Facilitator Superfamily LMJ37_11525 PF04183 IucA / IucC family LMJ37_11525 PF06276 Ferric iron reductase FhuF-like transporter LMJ37_11530 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LMJ37_11530 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LMJ37_11540 PF02654 Cobalamin-5-phosphate synthase LMJ37_11550 PF02277 Phosphoribosyltransferase LMJ37_11555 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase LMJ37_11560 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LMJ37_11560 PF07685 CobB/CobQ-like glutamine amidotransferase domain LMJ37_11565 PF00155 Aminotransferase class I and II LMJ37_11570 PF03186 CobD/Cbib protein LMJ37_11570 PF17113 Regulatory signalling modulator protein AmpE LMJ37_11575 PF12557 Cob(I)alamin adenosyltransferase N terminal LMJ37_11575 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP LMJ37_11595 PF07715 TonB-dependent Receptor Plug Domain LMJ37_11595 PF00593 TonB dependent receptor LMJ37_11600 PF02861 Clp amino terminal domain, pathogenicity island component LMJ37_11600 PF17871 AAA lid domain LMJ37_11600 PF10431 C-terminal, D2-small domain, of ClpB protein LMJ37_11600 PF00004 ATPase family associated with various cellular activities (AAA) LMJ37_11600 PF07724 AAA domain (Cdc48 subfamily) LMJ37_11605 PF00005 ABC transporter LMJ37_11610 PF00528 Binding-protein-dependent transport system inner membrane component LMJ37_11615 PF09084 NMT1/THI5 like LMJ37_11620 PF00248 Aldo/keto reductase family LMJ37_11625 PF00296 Luciferase-like monooxygenase LMJ37_11630 PF07715 TonB-dependent Receptor Plug Domain LMJ37_11630 PF00593 TonB dependent receptor LMJ37_11635 PF01541 GIY-YIG catalytic domain LMJ37_11670 PF07715 TonB-dependent Receptor Plug Domain LMJ37_11670 PF00593 TonB dependent receptor LMJ37_11675 PF02358 Trehalose-phosphatase LMJ37_11685 PF00982 Glycosyltransferase family 20 LMJ37_11690 PF01011 PQQ enzyme repeat LMJ37_11695 PF00672 HAMP domain LMJ37_11695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LMJ37_11695 PF02203 Tar ligand binding domain homologue LMJ37_11700 PF04134 Protein of unknown function, DUF393 LMJ37_11710 PF02578 Multi-copper polyphenol oxidoreductase laccase LMJ37_11715 PF00849 RNA pseudouridylate synthase LMJ37_11720 PF13525 Outer membrane lipoprotein LMJ37_11730 PF00795 Carbon-nitrogen hydrolase LMJ37_11730 PF02540 NAD synthase LMJ37_11745 PF02629 CoA binding domain LMJ37_11745 PF00549 CoA-ligase LMJ37_11750 PF08442 ATP-grasp domain LMJ37_11750 PF00549 CoA-ligase LMJ37_11755 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_11755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_11760 PF00158 Sigma-54 interaction domain LMJ37_11760 PF00072 Response regulator receiver domain LMJ37_11760 PF02954 Bacterial regulatory protein, Fis family LMJ37_11765 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LMJ37_11765 PF00437 Type II/IV secretion system protein LMJ37_11770 PF00114 Pilin (bacterial filament) LMJ37_11770 PF07963 Prokaryotic N-terminal methylation motif LMJ37_11775 PF00482 Type II secretion system (T2SS), protein F LMJ37_11780 PF06750 Bacterial Peptidase A24 N-terminal domain LMJ37_11780 PF01478 Type IV leader peptidase family LMJ37_11785 PF01121 Dephospho-CoA kinase LMJ37_11805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_11805 PF16736 Single Cache-like LMJ37_11805 PF00989 PAS fold LMJ37_11805 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_11810 PF00072 Response regulator receiver domain LMJ37_11810 PF00486 Transcriptional regulatory protein, C terminal LMJ37_11820 PF08443 RimK-like ATP-grasp domain LMJ37_11820 PF18030 RimK PreATP-grasp domain LMJ37_11825 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LMJ37_11825 PF00128 Alpha amylase, catalytic domain LMJ37_11935 PF05973 Phage derived protein Gp49-like (DUF891) LMJ37_11965 PF03527 RHS protein LMJ37_11965 PF05593 RHS Repeat LMJ37_12000 PF00657 GDSL-like Lipase/Acylhydrolase LMJ37_12000 PF03797 Autotransporter beta-domain LMJ37_12010 PF05690 Thiazole biosynthesis protein ThiG LMJ37_12015 PF02390 Putative methyltransferase LMJ37_12020 PF03600 Citrate transporter LMJ37_12020 PF02080 TrkA-C domain LMJ37_12035 PF01557 Fumarylacetoacetate (FAA) hydrolase family LMJ37_12040 PF01741 Large-conductance mechanosensitive channel, MscL LMJ37_12050 PF00356 Bacterial regulatory proteins, lacI family LMJ37_12055 PF02611 CDP-diacylglycerol pyrophosphatase LMJ37_12065 PF05662 Coiled stalk of trimeric autotransporter adhesin LMJ37_12065 PF13018 Extended Signal Peptide of Type V secretion system LMJ37_12065 PF03895 YadA-like membrane anchor domain LMJ37_12065 PF05658 Head domain of trimeric autotransporter adhesin LMJ37_12090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_12090 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_12090 PF09456 RcsC Alpha-Beta-Loop (ABL) LMJ37_12090 PF00072 Response regulator receiver domain LMJ37_12095 PF12792 CSS motif domain associated with EAL LMJ37_12095 PF00563 EAL domain LMJ37_12115 PF00553 Cellulose binding domain LMJ37_12115 PF00041 Fibronectin type III domain LMJ37_12115 PF01341 Glycosyl hydrolases family 6 LMJ37_12125 PF00703 Glycosyl hydrolases family 2 LMJ37_12125 PF02837 Glycosyl hydrolases family 2, sugar binding domain LMJ37_12125 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain LMJ37_12130 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation LMJ37_12130 PF14508 Glycosyl-hydrolase 97 N-terminal LMJ37_12130 PF10566 Glycoside hydrolase 97 LMJ37_12145 PF00135 Carboxylesterase family LMJ37_12150 PF00588 SpoU rRNA Methylase family LMJ37_12150 PF08032 RNA 2'-O ribose methyltransferase substrate binding LMJ37_12160 PF11838 ERAP1-like C-terminal domain LMJ37_12160 PF01433 Peptidase family M1 domain LMJ37_12165 PF00873 AcrB/AcrD/AcrF family LMJ37_12170 PF00529 HlyD membrane-fusion protein of T1SS LMJ37_12170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LMJ37_12175 PF00009 Elongation factor Tu GTP binding domain LMJ37_12180 PF01507 Phosphoadenosine phosphosulfate reductase family LMJ37_12185 PF00175 Oxidoreductase NAD-binding domain LMJ37_12185 PF00667 FAD binding domain LMJ37_12185 PF00258 Flavodoxin LMJ37_12190 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LMJ37_12190 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LMJ37_12195 PF01507 Phosphoadenosine phosphosulfate reductase family LMJ37_12215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_12215 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_12215 PF01627 Hpt domain LMJ37_12215 PF00072 Response regulator receiver domain LMJ37_12225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMJ37_12225 PF03466 LysR substrate binding domain LMJ37_12230 PF10414 Sirohaem synthase dimerisation region LMJ37_12230 PF14824 Sirohaem biosynthesis protein central LMJ37_12230 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LMJ37_12235 PF00291 Pyridoxal-phosphate dependent enzyme LMJ37_12245 PF01661 Macro domain LMJ37_12250 PF00274 Fructose-bisphosphate aldolase class-I LMJ37_12255 PF00224 Pyruvate kinase, barrel domain LMJ37_12255 PF02887 Pyruvate kinase, alpha/beta domain LMJ37_12260 PF13419 Haloacid dehalogenase-like hydrolase LMJ37_12265 PF00162 Phosphoglycerate kinase LMJ37_12285 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LMJ37_12285 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LMJ37_12295 PF03922 OmpW family LMJ37_12300 PF03922 OmpW family LMJ37_12310 PF04273 Putative phosphatase (DUF442) LMJ37_12310 PF00753 Metallo-beta-lactamase superfamily LMJ37_12320 PF00528 Binding-protein-dependent transport system inner membrane component LMJ37_12325 PF00005 ABC transporter LMJ37_12325 PF03459 TOBE domain LMJ37_12360 PF01476 LysM domain LMJ37_12360 PF03734 L,D-transpeptidase catalytic domain LMJ37_12365 PF04225 Opacity-associated protein A LysM-like domain LMJ37_12365 PF01551 Peptidase family M23 LMJ37_12375 PF07715 TonB-dependent Receptor Plug Domain LMJ37_12375 PF00593 TonB dependent receptor LMJ37_12385 PF02780 Transketolase, C-terminal domain LMJ37_12385 PF02779 Transketolase, pyrimidine binding domain LMJ37_12385 PF00456 Transketolase, thiamine diphosphate binding domain LMJ37_12390 PF00375 Sodium:dicarboxylate symporter family LMJ37_12400 PF00092 von Willebrand factor type A domain LMJ37_12400 PF07584 Aerotolerance regulator N-terminal LMJ37_12420 PF17863 AAA lid domain LMJ37_12420 PF07726 ATPase family associated with various cellular activities (AAA) LMJ37_12425 PF11741 AMIN domain LMJ37_12425 PF00263 Bacterial type II and III secretion system protein LMJ37_12425 PF03958 Bacterial type II/III secretion system short domain LMJ37_12425 PF07660 Secretin and TonB N terminus short domain LMJ37_12430 PF04351 Pilus assembly protein, PilP LMJ37_12435 PF04350 Pilus assembly protein, PilO LMJ37_12440 PF05137 Fimbrial assembly protein (PilN) LMJ37_12445 PF11104 Type IV pilus assembly protein PilM; LMJ37_12450 PF00905 Penicillin binding protein transpeptidase domain LMJ37_12450 PF17092 Penicillin-binding protein OB-like domain LMJ37_12450 PF00912 Transglycosylase LMJ37_12460 PF00285 Citrate synthase, C-terminal domain LMJ37_12465 PF01197 Ribosomal protein L31 LMJ37_12470 PF01156 Inosine-uridine preferring nucleoside hydrolase LMJ37_12475 PF17191 RecG wedge domain LMJ37_12475 PF00271 Helicase conserved C-terminal domain LMJ37_12475 PF00270 DEAD/DEAH box helicase LMJ37_12480 PF01042 Endoribonuclease L-PSP LMJ37_12485 PF13291 ACT domain LMJ37_12485 PF04607 Region found in RelA / SpoT proteins LMJ37_12485 PF02824 TGS domain LMJ37_12490 PF01192 RNA polymerase Rpb6 LMJ37_12495 PF00625 Guanylate kinase LMJ37_12500 PF03755 YicC-like family, N-terminal region LMJ37_12500 PF08340 Domain of unknown function (DUF1732) LMJ37_12505 PF01138 3' exoribonuclease family, domain 1 LMJ37_12505 PF03725 3' exoribonuclease family, domain 2 LMJ37_12515 PF01725 Ham1 family LMJ37_12520 PF06969 HemN C-terminal domain LMJ37_12520 PF04055 Radical SAM superfamily LMJ37_12535 PF00557 Metallopeptidase family M24 LMJ37_12545 PF05195 Aminopeptidase P, N-terminal domain LMJ37_12545 PF00557 Metallopeptidase family M24 LMJ37_12550 PF03695 Uncharacterised protein family (UPF0149) LMJ37_12560 PF05164 Cell division protein ZapA LMJ37_12570 PF01812 5-formyltetrahydrofolate cyclo-ligase family LMJ37_12580 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LMJ37_12590 PF13369 Transglutaminase-like superfamily LMJ37_12595 PF00301 Rubredoxin LMJ37_12600 PF02581 Thiamine monophosphate synthase LMJ37_12610 PF00202 Aminotransferase class-III LMJ37_12615 PF00196 Bacterial regulatory proteins, luxR family LMJ37_12615 PF17874 MalT-like TPR region LMJ37_12620 PF00127 Copper binding proteins, plastocyanin/azurin family LMJ37_12625 PF00155 Aminotransferase class I and II LMJ37_12635 PF00034 Cytochrome c LMJ37_12635 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LMJ37_12640 PF01593 Flavin containing amine oxidoreductase LMJ37_12655 PF00202 Aminotransferase class-III LMJ37_12660 PF00520 Ion transport protein LMJ37_12660 PF00027 Cyclic nucleotide-binding domain LMJ37_12680 PF01569 PAP2 superfamily LMJ37_12685 PF01062 Bestrophin, RFP-TM, chloride channel LMJ37_12695 PF01225 Mur ligase family, catalytic domain LMJ37_12695 PF02875 Mur ligase family, glutamate ligase domain LMJ37_12695 PF08245 Mur ligase middle domain LMJ37_12705 PF00365 Phosphofructokinase LMJ37_12715 PF03030 Inorganic H+ pyrophosphatase LMJ37_12725 PF00719 Inorganic pyrophosphatase LMJ37_12735 PF00593 TonB dependent receptor LMJ37_12735 PF07715 TonB-dependent Receptor Plug Domain LMJ37_12740 PF12833 Helix-turn-helix domain LMJ37_12750 PF13667 ThiC-associated domain LMJ37_12750 PF01964 Radical SAM ThiC family LMJ37_12755 PF07715 TonB-dependent Receptor Plug Domain LMJ37_12755 PF00593 TonB dependent receptor LMJ37_12760 PF00672 HAMP domain LMJ37_12760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LMJ37_12770 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LMJ37_12770 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LMJ37_12775 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LMJ37_12775 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LMJ37_12775 PF00205 Thiamine pyrophosphate enzyme, central domain LMJ37_12785 PF00291 Pyridoxal-phosphate dependent enzyme LMJ37_12790 PF00682 HMGL-like LMJ37_12790 PF08502 LeuA allosteric (dimerisation) domain LMJ37_12795 PF00180 Isocitrate/isopropylmalate dehydrogenase LMJ37_12800 PF00694 Aconitase C-terminal domain LMJ37_12805 PF00330 Aconitase family (aconitate hydratase) LMJ37_12810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMJ37_12815 PF00990 Diguanylate cyclase, GGDEF domain LMJ37_12830 PF02321 Outer membrane efflux protein LMJ37_12835 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LMJ37_12840 PF03279 Bacterial lipid A biosynthesis acyltransferase LMJ37_12865 PF01515 Phosphate acetyl/butaryl transferase LMJ37_12865 PF00390 Malic enzyme, N-terminal domain LMJ37_12865 PF03949 Malic enzyme, NAD binding domain LMJ37_12870 PF00375 Sodium:dicarboxylate symporter family LMJ37_12880 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_12880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_12880 PF02743 Cache domain LMJ37_12885 PF07690 Major Facilitator Superfamily LMJ37_12895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMJ37_12895 PF03466 LysR substrate binding domain LMJ37_12900 PF00248 Aldo/keto reductase family LMJ37_12915 PF00196 Bacterial regulatory proteins, luxR family LMJ37_12915 PF00072 Response regulator receiver domain LMJ37_12925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_12925 PF08521 Two-component sensor kinase N-terminal LMJ37_12925 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_12930 PF00072 Response regulator receiver domain LMJ37_12930 PF00486 Transcriptional regulatory protein, C terminal LMJ37_12940 PF03600 Citrate transporter LMJ37_12945 PF00106 short chain dehydrogenase LMJ37_12950 PF00356 Bacterial regulatory proteins, lacI family LMJ37_12965 PF00128 Alpha amylase, catalytic domain LMJ37_12980 PF03193 RsgA GTPase LMJ37_12985 PF00155 Aminotransferase class I and II LMJ37_13000 PF00593 TonB dependent receptor LMJ37_13000 PF07715 TonB-dependent Receptor Plug Domain LMJ37_13005 PF01522 Polysaccharide deacetylase LMJ37_13010 PF00462 Glutaredoxin LMJ37_13025 PF01979 Amidohydrolase family LMJ37_13030 PF01979 Amidohydrolase family LMJ37_13050 PF02645 Uncharacterised protein, DegV family COG1307 LMJ37_13055 PF01327 Polypeptide deformylase LMJ37_13060 PF03960 ArsC family LMJ37_13075 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) LMJ37_13080 PF01270 Glycosyl hydrolases family 8 LMJ37_13085 PF03170 Bacterial cellulose synthase subunit LMJ37_13090 PF03552 Cellulose synthase LMJ37_13090 PF00535 Glycosyl transferase family 2 LMJ37_13090 PF07238 PilZ domain LMJ37_13105 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LMJ37_13105 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LMJ37_13140 PF00593 TonB dependent receptor LMJ37_13140 PF07715 TonB-dependent Receptor Plug Domain LMJ37_13150 PF00392 Bacterial regulatory proteins, gntR family LMJ37_13150 PF07702 UTRA domain LMJ37_13170 PF03958 Bacterial type II/III secretion system short domain LMJ37_13170 PF00263 Bacterial type II and III secretion system protein LMJ37_13180 PF10741 Type II secretion system (T2SS), protein M subtype b LMJ37_13185 PF05137 Fimbrial assembly protein (PilN) LMJ37_13190 PF03934 Type II secretion system (T2SS), protein K LMJ37_13200 PF07963 Prokaryotic N-terminal methylation motif LMJ37_13205 PF12019 Type II transport protein GspH LMJ37_13210 PF08334 Type II secretion system (T2SS), protein G LMJ37_13215 PF00482 Type II secretion system (T2SS), protein F LMJ37_13220 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LMJ37_13220 PF00437 Type II/IV secretion system protein LMJ37_13225 PF00082 Subtilase family LMJ37_13225 PF04151 Bacterial pre-peptidase C-terminal domain LMJ37_13230 PF13018 Extended Signal Peptide of Type V secretion system LMJ37_13230 PF03895 YadA-like membrane anchor domain LMJ37_13230 PF05658 Head domain of trimeric autotransporter adhesin LMJ37_13230 PF05662 Coiled stalk of trimeric autotransporter adhesin LMJ37_13235 PF00082 Subtilase family LMJ37_13235 PF04151 Bacterial pre-peptidase C-terminal domain LMJ37_13240 PF05662 Coiled stalk of trimeric autotransporter adhesin LMJ37_13240 PF05658 Head domain of trimeric autotransporter adhesin LMJ37_13240 PF03895 YadA-like membrane anchor domain LMJ37_13240 PF13018 Extended Signal Peptide of Type V secretion system LMJ37_13245 PF02769 AIR synthase related protein, C-terminal domain LMJ37_13245 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LMJ37_13245 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LMJ37_13250 PF10411 Disulfide bond isomerase protein N-terminus LMJ37_13250 PF13098 Thioredoxin-like domain LMJ37_13255 PF02899 Phage integrase, N-terminal SAM-like domain LMJ37_13255 PF00589 Phage integrase family LMJ37_13270 PF03739 Lipopolysaccharide export system permease LptF/LptG LMJ37_13280 PF02789 Cytosol aminopeptidase family, N-terminal domain LMJ37_13280 PF00883 Cytosol aminopeptidase family, catalytic domain LMJ37_13295 PF08264 Anticodon-binding domain of tRNA LMJ37_13295 PF10458 Valyl tRNA synthetase tRNA binding arm LMJ37_13295 PF00133 tRNA synthetases class I (I, L, M and V) LMJ37_13305 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain LMJ37_13305 PF01464 Transglycosylase SLT domain LMJ37_13325 PF01066 CDP-alcohol phosphatidyltransferase LMJ37_13335 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LMJ37_13335 PF04073 Aminoacyl-tRNA editing domain LMJ37_13335 PF03129 Anticodon binding domain LMJ37_13340 PF00816 H-NS histone family LMJ37_13350 PF02405 Permease MlaE LMJ37_13355 PF00005 ABC transporter LMJ37_13360 PF02470 MlaD protein LMJ37_13360 PF03886 ABC-type transport auxiliary lipoprotein component LMJ37_13380 PF01144 Coenzyme A transferase LMJ37_13385 PF01144 Coenzyme A transferase LMJ37_13390 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LMJ37_13390 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LMJ37_13390 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LMJ37_13390 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LMJ37_13395 PF01050 Mannose-6-phosphate isomerase LMJ37_13395 PF00483 Nucleotidyl transferase LMJ37_13400 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LMJ37_13400 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LMJ37_13400 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LMJ37_13405 PF04321 RmlD substrate binding domain LMJ37_13410 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LMJ37_13415 PF00483 Nucleotidyl transferase LMJ37_13420 PF16363 GDP-mannose 4,6 dehydratase LMJ37_13425 PF01012 Electron transfer flavoprotein domain LMJ37_13430 PF01012 Electron transfer flavoprotein domain LMJ37_13430 PF00766 Electron transfer flavoprotein FAD-binding domain LMJ37_13440 PF00535 Glycosyl transferase family 2 LMJ37_13450 PF01593 Flavin containing amine oxidoreductase LMJ37_13460 PF05050 Methyltransferase FkbM domain LMJ37_13470 PF16363 GDP-mannose 4,6 dehydratase LMJ37_13475 PF16363 GDP-mannose 4,6 dehydratase LMJ37_13480 PF13477 Glycosyl transferase 4-like LMJ37_13480 PF00534 Glycosyl transferases group 1 LMJ37_13485 PF13847 Methyltransferase domain LMJ37_13485 PF00069 Protein kinase domain LMJ37_13490 PF00005 ABC transporter LMJ37_13500 PF13439 Glycosyltransferase Family 4 LMJ37_13500 PF00534 Glycosyl transferases group 1 LMJ37_13505 PF01053 Cys/Met metabolism PLP-dependent enzyme LMJ37_13510 PF00571 CBS domain LMJ37_13510 PF00291 Pyridoxal-phosphate dependent enzyme LMJ37_13530 PF00437 Type II/IV secretion system protein LMJ37_13535 PF14497 Glutathione S-transferase, C-terminal domain LMJ37_13535 PF02798 Glutathione S-transferase, N-terminal domain LMJ37_13545 PF00270 DEAD/DEAH box helicase LMJ37_13545 PF00271 Helicase conserved C-terminal domain LMJ37_13555 PF07715 TonB-dependent Receptor Plug Domain LMJ37_13555 PF00593 TonB dependent receptor LMJ37_13560 PF01242 6-pyruvoyl tetrahydropterin synthase LMJ37_13575 PF13185 GAF domain LMJ37_13585 PF00756 Putative esterase LMJ37_13590 PF00593 TonB dependent receptor LMJ37_13590 PF07715 TonB-dependent Receptor Plug Domain LMJ37_13595 PF13419 Haloacid dehalogenase-like hydrolase LMJ37_13600 PF11799 impB/mucB/samB family C-terminal domain LMJ37_13600 PF00817 impB/mucB/samB family LMJ37_13605 PF07977 FabA-like domain LMJ37_13610 PF00109 Beta-ketoacyl synthase, N-terminal domain LMJ37_13610 PF02801 Beta-ketoacyl synthase, C-terminal domain LMJ37_13620 PF01432 Peptidase family M3 LMJ37_13635 PF07732 Multicopper oxidase LMJ37_13635 PF00394 Multicopper oxidase LMJ37_13635 PF07731 Multicopper oxidase LMJ37_13640 PF05275 Copper resistance protein B precursor (CopB) LMJ37_13645 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LMJ37_13675 PF01380 SIS domain LMJ37_13680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LMJ37_13685 PF00005 ABC transporter LMJ37_13685 PF02687 FtsX-like permease family LMJ37_13685 PF12704 MacB-like periplasmic core domain LMJ37_13690 PF12704 MacB-like periplasmic core domain LMJ37_13690 PF02687 FtsX-like permease family LMJ37_13695 PF00005 ABC transporter LMJ37_13695 PF12704 MacB-like periplasmic core domain LMJ37_13695 PF02687 FtsX-like permease family LMJ37_13705 PF02954 Bacterial regulatory protein, Fis family LMJ37_13705 PF00072 Response regulator receiver domain LMJ37_13705 PF00158 Sigma-54 interaction domain LMJ37_13710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_13710 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_13715 PF00132 Bacterial transferase hexapeptide (six repeats) LMJ37_13715 PF14602 Hexapeptide repeat of succinyl-transferase LMJ37_13715 PF12804 MobA-like NTP transferase domain LMJ37_13730 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LMJ37_13730 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LMJ37_13735 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LMJ37_13735 PF02874 ATP synthase alpha/beta family, beta-barrel domain LMJ37_13740 PF00231 ATP synthase LMJ37_13745 PF00306 ATP synthase alpha/beta chain, C terminal domain LMJ37_13745 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LMJ37_13745 PF02874 ATP synthase alpha/beta family, beta-barrel domain LMJ37_13750 PF00213 ATP synthase delta (OSCP) subunit LMJ37_13755 PF00430 ATP synthase B/B' CF(0) LMJ37_13760 PF00137 ATP synthase subunit C LMJ37_13765 PF00119 ATP synthase A chain LMJ37_13785 PF07992 Pyridine nucleotide-disulphide oxidoreductase LMJ37_13785 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LMJ37_13795 PF02817 e3 binding domain LMJ37_13795 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LMJ37_13795 PF00364 Biotin-requiring enzyme LMJ37_13830 PF03180 NLPA lipoprotein LMJ37_13835 PF00528 Binding-protein-dependent transport system inner membrane component LMJ37_13840 PF09383 NIL domain LMJ37_13840 PF00005 ABC transporter LMJ37_13845 PF00892 EamA-like transporter family LMJ37_13850 PF04461 Protein of unknown function (DUF520) LMJ37_13860 PF01627 Hpt domain LMJ37_13860 PF18415 Histidine kinase receptor ArcB trans-membrane domain LMJ37_13860 PF00989 PAS fold LMJ37_13860 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_13860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_13860 PF00072 Response regulator receiver domain LMJ37_13880 PF13419 Haloacid dehalogenase-like hydrolase LMJ37_13885 PF00849 RNA pseudouridylate synthase LMJ37_13885 PF01479 S4 domain LMJ37_13890 PF05175 Methyltransferase small domain LMJ37_13890 PF08468 Methyltransferase small domain N-terminal LMJ37_13900 PF07995 Glucose / Sorbosone dehydrogenase LMJ37_13910 PF00989 PAS fold LMJ37_13910 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_13910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_13930 PF00842 Alanine racemase, C-terminal domain LMJ37_13930 PF01168 Alanine racemase, N-terminal domain LMJ37_13935 PF01266 FAD dependent oxidoreductase LMJ37_13940 PF01037 Lrp/AsnC ligand binding domain LMJ37_13950 PF01641 SelR domain LMJ37_13960 PF01618 MotA/TolQ/ExbB proton channel family LMJ37_13965 PF00691 OmpA family LMJ37_13965 PF13677 Membrane MotB of proton-channel complex MotA/MotB LMJ37_13990 PF01061 ABC-2 type transporter LMJ37_13995 PF00005 ABC transporter LMJ37_14000 PF00999 Sodium/hydrogen exchanger family LMJ37_14005 PF02469 Fasciclin domain LMJ37_14010 PF03167 Uracil DNA glycosylase superfamily LMJ37_14020 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LMJ37_14030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMJ37_14030 PF03466 LysR substrate binding domain LMJ37_14035 PF03358 NADPH-dependent FMN reductase LMJ37_14040 PF00248 Aldo/keto reductase family LMJ37_14050 PF01431 Peptidase family M13 LMJ37_14050 PF05649 Peptidase family M13 LMJ37_14070 PF13520 Amino acid permease LMJ37_14080 PF04397 LytTr DNA-binding domain LMJ37_14080 PF00072 Response regulator receiver domain LMJ37_14085 PF02743 Cache domain LMJ37_14085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_14085 PF06580 Histidine kinase LMJ37_14085 PF00672 HAMP domain LMJ37_14100 PF05974 Domain of unknown function (DUF892) LMJ37_14105 PF05067 Manganese containing catalase LMJ37_14125 PF01739 CheR methyltransferase, SAM binding domain LMJ37_14125 PF08448 PAS fold LMJ37_14125 PF01339 CheB methylesterase LMJ37_14125 PF03705 CheR methyltransferase, all-alpha domain LMJ37_14140 PF02954 Bacterial regulatory protein, Fis family LMJ37_14140 PF00072 Response regulator receiver domain LMJ37_14140 PF00158 Sigma-54 interaction domain LMJ37_14150 PF01654 Cytochrome bd terminal oxidase subunit I LMJ37_14155 PF02322 Cytochrome bd terminal oxidase subunit II LMJ37_14175 PF16363 GDP-mannose 4,6 dehydratase LMJ37_14185 PF03275 UDP-galactopyranose mutase LMJ37_14195 PF00005 ABC transporter LMJ37_14195 PF00664 ABC transporter transmembrane region LMJ37_14210 PF08240 Alcohol dehydrogenase GroES-like domain LMJ37_14210 PF13823 Alcohol dehydrogenase GroES-associated LMJ37_14210 PF00107 Zinc-binding dehydrogenase LMJ37_14255 PF00593 TonB dependent receptor LMJ37_14255 PF07715 TonB-dependent Receptor Plug Domain LMJ37_14275 PF00005 ABC transporter LMJ37_14285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMJ37_14285 PF03466 LysR substrate binding domain LMJ37_14290 PF01042 Endoribonuclease L-PSP LMJ37_14305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LMJ37_14305 PF00672 HAMP domain LMJ37_14320 PF03466 LysR substrate binding domain LMJ37_14320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMJ37_14325 PF02525 Flavodoxin-like fold LMJ37_14365 PF00557 Metallopeptidase family M24 LMJ37_14445 PF13356 Arm DNA-binding domain LMJ37_14445 PF00589 Phage integrase family LMJ37_14470 PF01555 DNA methylase LMJ37_14525 PF00182 Chitinase class I LMJ37_14725 PF04545 Sigma-70, region 4 LMJ37_14725 PF04539 Sigma-70 region 3 LMJ37_14725 PF04542 Sigma-70 region 2 LMJ37_14725 PF00140 Sigma-70 factor, region 1.2 LMJ37_14725 PF04546 Sigma-70, non-essential region LMJ37_14725 PF03979 Sigma-70 factor, region 1.1 LMJ37_14730 PF02580 D-Tyr-tRNA(Tyr) deacylase LMJ37_14735 PF03279 Bacterial lipid A biosynthesis acyltransferase LMJ37_14750 PF00925 GTP cyclohydrolase II LMJ37_14770 PF00535 Glycosyl transferase family 2 LMJ37_14785 PF01189 16S rRNA methyltransferase RsmB/F LMJ37_14785 PF01029 NusB family LMJ37_14790 PF02911 Formyl transferase, C-terminal domain LMJ37_14790 PF00551 Formyl transferase LMJ37_14795 PF01327 Polypeptide deformylase LMJ37_14800 PF01476 LysM domain LMJ37_14805 PF02481 DNA recombination-mediator protein A LMJ37_14805 PF17782 DprA winged helix domain LMJ37_14810 PF04361 Protein of unknown function (DUF494) LMJ37_14825 PF01131 DNA topoisomerase LMJ37_14825 PF01751 Toprim domain LMJ37_14825 PF13368 Topoisomerase C-terminal repeat LMJ37_14830 PF01300 Telomere recombination LMJ37_14855 PF01343 Peptidase family S49 LMJ37_14860 PF01554 MatE LMJ37_14880 PF00271 Helicase conserved C-terminal domain LMJ37_14880 PF00270 DEAD/DEAH box helicase LMJ37_14880 PF18074 Primosomal protein N C-terminal domain LMJ37_14880 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LMJ37_14880 PF17764 3′ DNA-binding domain (3′BD) LMJ37_14885 PF00043 Glutathione S-transferase, C-terminal domain LMJ37_14885 PF13417 Glutathione S-transferase, N-terminal domain LMJ37_14900 PF07992 Pyridine nucleotide-disulphide oxidoreductase LMJ37_14905 PF03458 UPF0126 domain LMJ37_14910 PF04545 Sigma-70, region 4 LMJ37_14910 PF04542 Sigma-70 region 2 LMJ37_14915 PF03167 Uracil DNA glycosylase superfamily LMJ37_14920 PF01339 CheB methylesterase LMJ37_14920 PF00072 Response regulator receiver domain LMJ37_14925 PF18075 FtsX extracellular domain LMJ37_14930 PF00005 ABC transporter LMJ37_14935 PF00270 DEAD/DEAH box helicase LMJ37_14935 PF00271 Helicase conserved C-terminal domain LMJ37_14935 PF12300 ATP-dependent RNA helicase RhlB LMJ37_14940 PF00085 Thioredoxin LMJ37_14945 PF07497 Rho termination factor, RNA-binding domain LMJ37_14945 PF07498 Rho termination factor, N-terminal domain LMJ37_14945 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LMJ37_14955 PF03466 LysR substrate binding domain LMJ37_14955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMJ37_14965 PF03971 Monomeric isocitrate dehydrogenase LMJ37_14975 PF04972 BON domain LMJ37_14975 PF01476 LysM domain LMJ37_14980 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LMJ37_14980 PF14489 QueF-like protein LMJ37_14985 PF01546 Peptidase family M20/M25/M40 LMJ37_14985 PF07687 Peptidase dimerisation domain LMJ37_14990 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LMJ37_14995 PF00873 AcrB/AcrD/AcrF family LMJ37_15000 PF00873 AcrB/AcrD/AcrF family LMJ37_15005 PF07063 Domain of unknown function (DUF1338) LMJ37_15045 PF01427 D-ala-D-ala dipeptidase LMJ37_15050 PF01510 N-acetylmuramoyl-L-alanine amidase LMJ37_15060 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LMJ37_15060 PF13378 Enolase C-terminal domain-like LMJ37_15070 PF13520 Amino acid permease LMJ37_15085 PF05360 yiaA/B two helix domain LMJ37_15095 PF00933 Glycosyl hydrolase family 3 N terminal domain LMJ37_15095 PF14310 Fibronectin type III-like domain LMJ37_15095 PF01915 Glycosyl hydrolase family 3 C-terminal domain LMJ37_15100 PF02152 Dihydroneopterin aldolase LMJ37_15105 PF00814 Glycoprotease family LMJ37_15110 PF01165 Ribosomal protein S21 LMJ37_15115 PF09424 Yqey-like protein LMJ37_15120 PF03631 Virulence factor BrkB LMJ37_15125 PF10410 DnaB-helicase binding domain of primase LMJ37_15125 PF08278 DNA primase DnaG DnaB-binding LMJ37_15125 PF08275 DNA primase catalytic core, N-terminal domain LMJ37_15125 PF01807 CHC2 zinc finger LMJ37_15130 PF13593 SBF-like CPA transporter family (DUF4137) LMJ37_15140 PF01040 UbiA prenyltransferase family LMJ37_15165 PF00510 Cytochrome c oxidase subunit III LMJ37_15170 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 LMJ37_15180 PF00115 Cytochrome C and Quinol oxidase polypeptide I LMJ37_15185 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LMJ37_15185 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LMJ37_15195 PF14850 DNA-binding domain of Proline dehydrogenase LMJ37_15195 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LMJ37_15195 PF01619 Proline dehydrogenase LMJ37_15195 PF00171 Aldehyde dehydrogenase family LMJ37_15225 PF00579 tRNA synthetases class I (W and Y) LMJ37_15230 PF04225 Opacity-associated protein A LysM-like domain LMJ37_15230 PF01551 Peptidase family M23 LMJ37_15235 PF03702 Anhydro-N-acetylmuramic acid kinase LMJ37_15245 PF07690 Major Facilitator Superfamily LMJ37_15250 PF03372 Endonuclease/Exonuclease/phosphatase family LMJ37_15255 PF00156 Phosphoribosyl transferase domain LMJ37_15265 PF13614 AAA domain LMJ37_15270 PF17762 HTH domain found in ParB protein LMJ37_15270 PF02195 ParB-like nuclease domain LMJ37_15280 PF01370 NAD dependent epimerase/dehydratase family LMJ37_15285 PF00535 Glycosyl transferase family 2 LMJ37_15300 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LMJ37_15300 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LMJ37_15300 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LMJ37_15300 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LMJ37_15305 PF00692 dUTPase LMJ37_15310 PF02441 Flavoprotein LMJ37_15310 PF04127 DNA / pantothenate metabolism flavoprotein LMJ37_15315 PF04002 RadC-like JAB domain LMJ37_15320 PF03485 Arginyl tRNA synthetase N terminal domain LMJ37_15320 PF00750 tRNA synthetases class I (R) LMJ37_15320 PF05746 DALR anticodon binding domain LMJ37_15335 PF00106 short chain dehydrogenase LMJ37_15345 PF03033 Glycosyltransferase family 28 N-terminal domain LMJ37_15350 PF00501 AMP-binding enzyme LMJ37_15350 PF00975 Thioesterase domain LMJ37_15350 PF00550 Phosphopantetheine attachment site LMJ37_15350 PF00668 Condensation domain LMJ37_15350 PF13193 AMP-binding enzyme C-terminal domain LMJ37_15350 PF00501 AMP-binding enzyme LMJ37_15350 PF00975 Thioesterase domain LMJ37_15350 PF00550 Phosphopantetheine attachment site LMJ37_15350 PF13193 AMP-binding enzyme C-terminal domain LMJ37_15350 PF00668 Condensation domain LMJ37_15355 PF17944 Arginine decarboxylase C-terminal helical extension LMJ37_15355 PF17810 Arginine decarboxylase helical bundle domain LMJ37_15355 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LMJ37_15360 PF17284 Spermidine synthase tetramerisation domain LMJ37_15380 PF00963 Cohesin domain LMJ37_15380 PF00754 F5/8 type C domain LMJ37_15380 PF00041 Fibronectin type III domain LMJ37_15380 PF07555 beta-N-acetylglucosaminidase LMJ37_15380 PF02838 Glycosyl hydrolase family 20, domain 2 LMJ37_15385 PF00543 Nitrogen regulatory protein P-II LMJ37_15390 PF04380 Membrane fusogenic activity LMJ37_15395 PF13335 Magnesium chelatase, subunit ChlI C-terminal LMJ37_15395 PF01078 Magnesium chelatase, subunit ChlI LMJ37_15410 PF12792 CSS motif domain associated with EAL LMJ37_15410 PF00563 EAL domain LMJ37_15415 PF00487 Fatty acid desaturase LMJ37_15420 PF00970 Oxidoreductase FAD-binding domain LMJ37_15420 PF00111 2Fe-2S iron-sulfur cluster binding domain LMJ37_15420 PF00175 Oxidoreductase NAD-binding domain LMJ37_15425 PF00440 Bacterial regulatory proteins, tetR family LMJ37_15435 PF01139 tRNA-splicing ligase RtcB LMJ37_15475 PF01370 NAD dependent epimerase/dehydratase family LMJ37_15475 PF08338 Domain of unknown function (DUF1731) LMJ37_15480 PF00072 Response regulator receiver domain LMJ37_15480 PF00486 Transcriptional regulatory protein, C terminal LMJ37_15485 PF08521 Two-component sensor kinase N-terminal LMJ37_15485 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_15485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_15515 PF00595 PDZ domain LMJ37_15535 PF01594 AI-2E family transporter LMJ37_15540 PF13419 Haloacid dehalogenase-like hydrolase LMJ37_15545 PF00883 Cytosol aminopeptidase family, catalytic domain LMJ37_15545 PF02789 Cytosol aminopeptidase family, N-terminal domain LMJ37_15555 PF04542 Sigma-70 region 2 LMJ37_15555 PF08281 Sigma-70, region 4 LMJ37_15560 PF00199 Catalase LMJ37_15575 PF00072 Response regulator receiver domain LMJ37_15575 PF00196 Bacterial regulatory proteins, luxR family LMJ37_15580 PF07730 Histidine kinase LMJ37_15585 PF13533 Biotin-lipoyl like LMJ37_15590 PF00005 ABC transporter LMJ37_15610 PF00892 EamA-like transporter family LMJ37_15615 PF00892 EamA-like transporter family LMJ37_15630 PF00753 Metallo-beta-lactamase superfamily LMJ37_15635 PF00579 tRNA synthetases class I (W and Y) LMJ37_15640 PF05532 CsbD-like LMJ37_15655 PF00491 Arginase family LMJ37_15680 PF02223 Thymidylate kinase LMJ37_15715 PF03309 Type III pantothenate kinase LMJ37_15720 PF02237 Biotin protein ligase C terminal domain LMJ37_15720 PF03099 Biotin/lipoate A/B protein ligase family LMJ37_15720 PF08279 HTH domain LMJ37_15730 PF06167 Glucose-regulated metallo-peptidase M90 LMJ37_15745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_15750 PF00072 Response regulator receiver domain LMJ37_15750 PF00486 Transcriptional regulatory protein, C terminal LMJ37_15760 PF01207 Dihydrouridine synthase (Dus) LMJ37_15775 PF00199 Catalase LMJ37_15775 PF06628 Catalase-related immune-responsive LMJ37_15780 PF06733 DEAD_2 LMJ37_15780 PF13307 Helicase C-terminal domain LMJ37_15795 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LMJ37_15795 PF01488 Shikimate / quinate 5-dehydrogenase LMJ37_15795 PF08501 Shikimate dehydrogenase substrate binding domain LMJ37_15805 PF00175 Oxidoreductase NAD-binding domain LMJ37_15805 PF00667 FAD binding domain LMJ37_15805 PF00258 Flavodoxin LMJ37_15815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMJ37_15815 PF03466 LysR substrate binding domain LMJ37_15830 PF00490 Delta-aminolevulinic acid dehydratase LMJ37_15855 PF00326 Prolyl oligopeptidase family LMJ37_15855 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region LMJ37_15860 PF00043 Glutathione S-transferase, C-terminal domain LMJ37_15860 PF02798 Glutathione S-transferase, N-terminal domain LMJ37_15885 PF04820 Tryptophan halogenase LMJ37_15900 PF00005 ABC transporter LMJ37_15910 PF01381 Helix-turn-helix LMJ37_15920 PF01229 Glycosyl hydrolases family 39 LMJ37_15925 PF02583 Metal-sensitive transcriptional repressor LMJ37_15930 PF16916 Dimerisation domain of Zinc Transporter LMJ37_15930 PF01545 Cation efflux family LMJ37_15940 PF07715 TonB-dependent Receptor Plug Domain LMJ37_15940 PF00593 TonB dependent receptor LMJ37_15950 PF01965 DJ-1/PfpI family LMJ37_15950 PF12833 Helix-turn-helix domain LMJ37_15955 PF00970 Oxidoreductase FAD-binding domain LMJ37_15955 PF00111 2Fe-2S iron-sulfur cluster binding domain LMJ37_15955 PF00175 Oxidoreductase NAD-binding domain LMJ37_15960 PF00005 ABC transporter LMJ37_15965 PF01061 ABC-2 type transporter LMJ37_15975 PF02558 Ketopantoate reductase PanE/ApbA LMJ37_15975 PF08546 Ketopantoate reductase PanE/ApbA C terminal LMJ37_16010 PF00268 Ribonucleotide reductase, small chain LMJ37_16015 PF00317 Ribonucleotide reductase, all-alpha domain LMJ37_16015 PF03477 ATP cone domain LMJ37_16015 PF02867 Ribonucleotide reductase, barrel domain LMJ37_16025 PF13380 CoA binding domain LMJ37_16025 PF13607 Succinyl-CoA ligase like flavodoxin domain LMJ37_16025 PF00583 Acetyltransferase (GNAT) family LMJ37_16030 PF00571 CBS domain LMJ37_16030 PF01769 Divalent cation transporter LMJ37_16030 PF03448 MgtE intracellular N domain LMJ37_16040 PF00999 Sodium/hydrogen exchanger family LMJ37_16040 PF02254 TrkA-N domain LMJ37_16045 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LMJ37_16045 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LMJ37_16050 PF00723 Glycosyl hydrolases family 15 LMJ37_16065 PF05166 YcgL domain LMJ37_16070 PF00109 Beta-ketoacyl synthase, N-terminal domain LMJ37_16070 PF02801 Beta-ketoacyl synthase, C-terminal domain LMJ37_16080 PF00535 Glycosyl transferase family 2 LMJ37_16130 PF01553 Acyltransferase LMJ37_16140 PF00550 Phosphopantetheine attachment site LMJ37_16145 PF04820 Tryptophan halogenase LMJ37_16165 PF07676 WD40-like Beta Propeller Repeat LMJ37_16165 PF00326 Prolyl oligopeptidase family LMJ37_16180 PF01218 Coproporphyrinogen III oxidase LMJ37_16185 PF01367 5'-3' exonuclease, C-terminal SAM fold LMJ37_16185 PF00476 DNA polymerase family A LMJ37_16185 PF01612 3'-5' exonuclease LMJ37_16185 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LMJ37_16195 PF06812 ImpA, N-terminal, type VI secretion system LMJ37_16215 PF03793 PASTA domain LMJ37_16215 PF00069 Protein kinase domain LMJ37_16230 PF14331 ImcF-related N-terminal domain LMJ37_16230 PF06761 Intracellular multiplication and human macrophage-killing LMJ37_16230 PF06744 Type VI secretion protein IcmF C-terminal LMJ37_16240 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE LMJ37_16255 PF04717 Type VI secretion system, phage-baseplate injector LMJ37_16290 PF08281 Sigma-70, region 4 LMJ37_16290 PF04542 Sigma-70 region 2 LMJ37_16305 PF00328 Histidine phosphatase superfamily (branch 2) LMJ37_16325 PF13018 Extended Signal Peptide of Type V secretion system LMJ37_16325 PF03895 YadA-like membrane anchor domain LMJ37_16325 PF05658 Head domain of trimeric autotransporter adhesin LMJ37_16325 PF05662 Coiled stalk of trimeric autotransporter adhesin LMJ37_16370 PF10431 C-terminal, D2-small domain, of ClpB protein LMJ37_16370 PF17871 AAA lid domain LMJ37_16370 PF07724 AAA domain (Cdc48 subfamily) LMJ37_16370 PF00004 ATPase family associated with various cellular activities (AAA) LMJ37_16380 PF05947 Type VI secretion system, TssF LMJ37_16385 PF04965 Gene 25-like lysozyme LMJ37_16390 PF07024 ImpE protein LMJ37_16395 PF05638 Type VI secretion system effector, Hcp LMJ37_16400 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath LMJ37_16405 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 LMJ37_16420 PF14602 Hexapeptide repeat of succinyl-transferase LMJ37_16420 PF12464 Maltose acetyltransferase LMJ37_16430 PF13361 UvrD-like helicase C-terminal domain LMJ37_16430 PF00580 UvrD/REP helicase N-terminal domain LMJ37_16440 PF13396 Phospholipase_D-nuclease N-terminal LMJ37_16440 PF13091 PLD-like domain LMJ37_16445 PF03466 LysR substrate binding domain LMJ37_16445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMJ37_16450 PF03737 Aldolase/RraA LMJ37_16455 PF04303 PrpF protein LMJ37_16460 PF04909 Amidohydrolase LMJ37_16465 PF00471 Ribosomal protein L33 LMJ37_16470 PF00830 Ribosomal L28 family LMJ37_16475 PF00873 AcrB/AcrD/AcrF family LMJ37_16485 PF13533 Biotin-lipoyl like LMJ37_16505 PF02527 rRNA small subunit methyltransferase G LMJ37_16510 PF16655 PhoD-like phosphatase, N-terminal domain LMJ37_16510 PF09423 PhoD-like phosphatase LMJ37_16515 PF09423 PhoD-like phosphatase LMJ37_16515 PF16655 PhoD-like phosphatase, N-terminal domain LMJ37_16520 PF01648 4'-phosphopantetheinyl transferase superfamily LMJ37_16525 PF04226 Transglycosylase associated protein LMJ37_16535 PF03372 Endonuclease/Exonuclease/phosphatase family LMJ37_16540 PF00480 ROK family LMJ37_16550 PF00639 PPIC-type PPIASE domain LMJ37_16550 PF09312 SurA N-terminal domain LMJ37_16560 PF00474 Sodium:solute symporter family LMJ37_16565 PF04341 Protein of unknown function, DUF485 LMJ37_16575 PF16177 Acetyl-coenzyme A synthetase N-terminus LMJ37_16575 PF00501 AMP-binding enzyme LMJ37_16575 PF13193 AMP-binding enzyme C-terminal domain LMJ37_16580 PF00196 Bacterial regulatory proteins, luxR family LMJ37_16580 PF00072 Response regulator receiver domain LMJ37_16600 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain LMJ37_16600 PF04616 Glycosyl hydrolases family 43 LMJ37_16610 PF00248 Aldo/keto reductase family LMJ37_16625 PF01557 Fumarylacetoacetate (FAA) hydrolase family LMJ37_16630 PF13378 Enolase C-terminal domain-like LMJ37_16630 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LMJ37_16635 PF05336 L-rhamnose mutarotase LMJ37_16640 PF07690 Major Facilitator Superfamily LMJ37_16645 PF09339 IclR helix-turn-helix domain LMJ37_16645 PF01614 Bacterial transcriptional regulator LMJ37_16650 PF02659 Putative manganese efflux pump LMJ37_16655 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_16655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_16665 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain LMJ37_16665 PF06165 Glycosyltransferase family 36 LMJ37_16680 PF01011 PQQ enzyme repeat LMJ37_16680 PF13360 PQQ-like domain LMJ37_16680 PF13570 PQQ-like domain LMJ37_16700 PF04357 TamB, inner membrane protein subunit of TAM complex LMJ37_16705 PF17243 POTRA domain TamA domain 1 LMJ37_16705 PF01103 Surface antigen LMJ37_16730 PF00005 ABC transporter LMJ37_16730 PF00664 ABC transporter transmembrane region LMJ37_16730 PF03412 Peptidase C39 family LMJ37_16740 PF02092 Glycyl-tRNA synthetase beta subunit LMJ37_16740 PF05746 DALR anticodon binding domain LMJ37_16745 PF02091 Glycyl-tRNA synthetase alpha subunit LMJ37_16750 PF00437 Type II/IV secretion system protein LMJ37_16750 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LMJ37_16765 PF00117 Glutamine amidotransferase class-I LMJ37_16765 PF00958 GMP synthase C terminal domain LMJ37_16775 PF00902 Sec-independent protein translocase protein (TatC) LMJ37_16780 PF02416 mttA/Hcf106 family LMJ37_16785 PF02416 mttA/Hcf106 family LMJ37_16795 PF00762 Ferrochelatase LMJ37_16800 PF12697 Alpha/beta hydrolase family LMJ37_16810 PF04381 Putative exonuclease, RdgC LMJ37_16815 PF01171 PP-loop family LMJ37_16825 PF00356 Bacterial regulatory proteins, lacI family LMJ37_16830 PF07477 Glycosyl hydrolase family 67 C-terminus LMJ37_16830 PF07488 Glycosyl hydrolase family 67 middle domain LMJ37_16830 PF03648 Glycosyl hydrolase family 67 N-terminus LMJ37_16840 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LMJ37_16840 PF13378 Enolase C-terminal domain-like LMJ37_16845 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain LMJ37_16845 PF04616 Glycosyl hydrolases family 43 LMJ37_16850 PF14310 Fibronectin type III-like domain LMJ37_16850 PF00933 Glycosyl hydrolase family 3 N terminal domain LMJ37_16850 PF01915 Glycosyl hydrolase family 3 C-terminal domain LMJ37_16850 PF07691 PA14 domain LMJ37_16855 PF08125 Mannitol dehydrogenase C-terminal domain LMJ37_16855 PF01232 Mannitol dehydrogenase Rossmann domain LMJ37_16885 PF00171 Aldehyde dehydrogenase family LMJ37_16900 PF00202 Aminotransferase class-III LMJ37_16910 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LMJ37_16910 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LMJ37_16930 PF08450 SMP-30/Gluconolactonase/LRE-like region LMJ37_16935 PF00331 Glycosyl hydrolase family 10 LMJ37_16940 PF00703 Glycosyl hydrolases family 2 LMJ37_16940 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 LMJ37_16940 PF16355 Domain of unknown function (DUF4982) LMJ37_16940 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LMJ37_16940 PF02837 Glycosyl hydrolases family 2, sugar binding domain LMJ37_16945 PF02614 Glucuronate isomerase LMJ37_16950 PF00553 Cellulose binding domain LMJ37_16950 PF03422 Carbohydrate binding module (family 6) LMJ37_16950 PF00331 Glycosyl hydrolase family 10 LMJ37_16965 PF03422 Carbohydrate binding module (family 6) LMJ37_16965 PF00331 Glycosyl hydrolase family 10 LMJ37_16965 PF00553 Cellulose binding domain LMJ37_16985 PF04616 Glycosyl hydrolases family 43 LMJ37_17015 PF00550 Phosphopantetheine attachment site LMJ37_17015 PF14765 Polyketide synthase dehydratase LMJ37_17015 PF02801 Beta-ketoacyl synthase, C-terminal domain LMJ37_17015 PF00109 Beta-ketoacyl synthase, N-terminal domain LMJ37_17015 PF16197 Ketoacyl-synthetase C-terminal extension LMJ37_17015 PF08240 Alcohol dehydrogenase GroES-like domain LMJ37_17015 PF00698 Acyl transferase domain LMJ37_17015 PF08659 KR domain LMJ37_17015 PF00107 Zinc-binding dehydrogenase LMJ37_17020 PF01553 Acyltransferase LMJ37_17030 PF00356 Bacterial regulatory proteins, lacI family LMJ37_17045 PF04820 Tryptophan halogenase LMJ37_17050 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LMJ37_17055 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) LMJ37_17060 PF04337 Protein of unknown function, DUF480 LMJ37_17070 PF13302 Acetyltransferase (GNAT) domain LMJ37_17075 PF00580 UvrD/REP helicase N-terminal domain LMJ37_17075 PF13361 UvrD-like helicase C-terminal domain LMJ37_17080 PF00265 Thymidine kinase LMJ37_17085 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_17085 PF01590 GAF domain LMJ37_17085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_17085 PF08446 PAS fold LMJ37_17085 PF00360 Phytochrome region LMJ37_17090 PF04349 Periplasmic glucan biosynthesis protein, MdoG LMJ37_17100 PF06827 Zinc finger found in FPG and IleRS LMJ37_17100 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LMJ37_17100 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LMJ37_17130 PF03594 Benzoate membrane transport protein LMJ37_17135 PF01590 GAF domain LMJ37_17135 PF13426 PAS domain LMJ37_17135 PF08446 PAS fold LMJ37_17135 PF00360 Phytochrome region LMJ37_17140 PF01126 Heme oxygenase LMJ37_17145 PF07690 Major Facilitator Superfamily LMJ37_17150 PF01263 Aldose 1-epimerase LMJ37_17160 PF02810 SEC-C motif LMJ37_17165 PF01925 Sulfite exporter TauE/SafE LMJ37_17190 PF01227 GTP cyclohydrolase I LMJ37_17200 PF07869 Protein of unknown function (DUF1656) LMJ37_17205 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LMJ37_17205 PF00529 HlyD membrane-fusion protein of T1SS LMJ37_17210 PF02321 Outer membrane efflux protein LMJ37_17215 PF04632 Fusaric acid resistance protein family LMJ37_17220 PF00083 Sugar (and other) transporter LMJ37_17225 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family LMJ37_17230 PF13091 PLD-like domain LMJ37_17230 PF13396 Phospholipase_D-nuclease N-terminal LMJ37_17255 PF01850 PIN domain LMJ37_17290 PF00849 RNA pseudouridylate synthase LMJ37_17300 PF02785 Biotin carboxylase C-terminal domain LMJ37_17300 PF00289 Biotin carboxylase, N-terminal domain LMJ37_17300 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LMJ37_17305 PF01425 Amidase LMJ37_17335 PF13538 UvrD-like helicase C-terminal domain LMJ37_17340 PF12705 PD-(D/E)XK nuclease superfamily LMJ37_17340 PF13361 UvrD-like helicase C-terminal domain LMJ37_17340 PF00580 UvrD/REP helicase N-terminal domain LMJ37_17345 PF17946 RecC C-terminal domain LMJ37_17360 PF00005 ABC transporter LMJ37_17365 PF02405 Permease MlaE LMJ37_17370 PF02470 MlaD protein LMJ37_17375 PF05494 MlaC protein LMJ37_17385 PF04333 MlaA lipoprotein LMJ37_17395 PF00255 Glutathione peroxidase LMJ37_17405 PF02646 RmuC family LMJ37_17410 PF08240 Alcohol dehydrogenase GroES-like domain LMJ37_17410 PF00107 Zinc-binding dehydrogenase LMJ37_17415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMJ37_17415 PF03466 LysR substrate binding domain LMJ37_17425 PF00043 Glutathione S-transferase, C-terminal domain LMJ37_17425 PF13417 Glutathione S-transferase, N-terminal domain LMJ37_17435 PF13520 Amino acid permease LMJ37_17440 PF07971 Glycosyl hydrolase family 92 LMJ37_17440 PF17678 Glycosyl hydrolase family 92 N-terminal domain LMJ37_17445 PF10947 Protein of unknown function (DUF2628) LMJ37_17450 PF00990 Diguanylate cyclase, GGDEF domain LMJ37_17455 PF13556 PucR C-terminal helix-turn-helix domain LMJ37_17455 PF05651 Putative sugar diacid recognition LMJ37_17455 PF17853 GGDEF-like domain LMJ37_17460 PF02595 Glycerate kinase family LMJ37_17465 PF07690 Major Facilitator Superfamily LMJ37_17480 PF10672 S-adenosylmethionine-dependent methyltransferase LMJ37_17480 PF17785 PUA-like domain LMJ37_17485 PF03741 Integral membrane protein TerC family LMJ37_17490 PF01694 Rhomboid family LMJ37_17495 PF03009 Glycerophosphoryl diester phosphodiesterase family LMJ37_17505 PF01569 PAP2 superfamily LMJ37_17510 PF01926 50S ribosome-binding GTPase LMJ37_17510 PF12631 MnmE helical domain LMJ37_17510 PF10396 GTP-binding protein TrmE N-terminus LMJ37_17515 PF01522 Polysaccharide deacetylase LMJ37_17520 PF14849 YidC periplasmic domain LMJ37_17520 PF02096 60Kd inner membrane protein LMJ37_17525 PF00825 Ribonuclease P LMJ37_17530 PF00468 Ribosomal protein L34 LMJ37_17535 PF00308 Bacterial dnaA protein LMJ37_17535 PF08299 Bacterial dnaA protein helix-turn-helix LMJ37_17535 PF11638 DnaA N-terminal domain LMJ37_17540 PF00712 DNA polymerase III beta subunit, N-terminal domain LMJ37_17540 PF02767 DNA polymerase III beta subunit, central domain LMJ37_17540 PF02768 DNA polymerase III beta subunit, C-terminal domain LMJ37_17545 PF02463 RecF/RecN/SMC N terminal domain LMJ37_17550 PF00204 DNA gyrase B LMJ37_17550 PF00986 DNA gyrase B subunit, carboxyl terminus LMJ37_17550 PF18053 DNA gyrase B subunit insert domain LMJ37_17550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_17550 PF01751 Toprim domain LMJ37_17560 PF01435 Peptidase family M48 LMJ37_17570 PF03544 Gram-negative bacterial TonB protein C-terminal LMJ37_17575 PF01618 MotA/TolQ/ExbB proton channel family LMJ37_17580 PF02472 Biopolymer transport protein ExbD/TolR LMJ37_17585 PF02472 Biopolymer transport protein ExbD/TolR LMJ37_17590 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LMJ37_17600 PF13091 PLD-like domain LMJ37_17600 PF13396 Phospholipase_D-nuclease N-terminal LMJ37_17615 PF04055 Radical SAM superfamily LMJ37_17640 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LMJ37_17640 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LMJ37_17645 PF13180 PDZ domain LMJ37_17645 PF03572 Peptidase family S41 LMJ37_17650 PF01551 Peptidase family M23 LMJ37_17660 PF04389 Peptidase family M28 LMJ37_17670 PF00150 Cellulase (glycosyl hydrolase family 5) LMJ37_17680 PF00150 Cellulase (glycosyl hydrolase family 5) LMJ37_17690 PF00150 Cellulase (glycosyl hydrolase family 5) LMJ37_17695 PF00107 Zinc-binding dehydrogenase LMJ37_17695 PF08240 Alcohol dehydrogenase GroES-like domain LMJ37_17700 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LMJ37_17700 PF07992 Pyridine nucleotide-disulphide oxidoreductase LMJ37_17705 PF00310 Glutamine amidotransferases class-II LMJ37_17705 PF04898 Glutamate synthase central domain LMJ37_17705 PF01645 Conserved region in glutamate synthase LMJ37_17705 PF01493 GXGXG motif LMJ37_17730 PF01804 Penicillin amidase LMJ37_17740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMJ37_17740 PF03466 LysR substrate binding domain LMJ37_17760 PF02397 Bacterial sugar transferase LMJ37_17765 PF02350 UDP-N-acetylglucosamine 2-epimerase LMJ37_17775 PF03808 Glycosyl transferase WecB/TagA/CpsF family LMJ37_17780 PF00534 Glycosyl transferases group 1 LMJ37_17780 PF13439 Glycosyltransferase Family 4 LMJ37_17800 PF13537 Glutamine amidotransferase domain LMJ37_17800 PF00733 Asparagine synthase LMJ37_17815 PF16363 GDP-mannose 4,6 dehydratase LMJ37_17830 PF00664 ABC transporter transmembrane region LMJ37_17830 PF00005 ABC transporter LMJ37_17840 PF00733 Asparagine synthase LMJ37_17840 PF13537 Glutamine amidotransferase domain LMJ37_17860 PF07475 HPr Serine kinase C-terminal domain LMJ37_17860 PF02603 HPr Serine kinase N terminus LMJ37_17865 PF00685 Sulfotransferase domain LMJ37_17945 PF00271 Helicase conserved C-terminal domain LMJ37_17945 PF09369 Domain of unknown function (DUF1998) LMJ37_17945 PF00270 DEAD/DEAH box helicase LMJ37_17950 PF03006 Haemolysin-III related LMJ37_17980 PF03466 LysR substrate binding domain LMJ37_17980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMJ37_17995 PF02525 Flavodoxin-like fold LMJ37_18000 PF05532 CsbD-like LMJ37_18020 PF16485 Protealysin propeptide LMJ37_18020 PF01447 Thermolysin metallopeptidase, catalytic domain LMJ37_18020 PF02868 Thermolysin metallopeptidase, alpha-helical domain LMJ37_18030 PF00293 NUDIX domain LMJ37_18030 PF13344 Haloacid dehalogenase-like hydrolase LMJ37_18045 PF00085 Thioredoxin LMJ37_18050 PF08946 Osmosensory transporter coiled coil LMJ37_18050 PF00083 Sugar (and other) transporter LMJ37_18090 PF07726 ATPase family associated with various cellular activities (AAA) LMJ37_18090 PF17863 AAA lid domain LMJ37_18120 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LMJ37_18125 PF00155 Aminotransferase class I and II LMJ37_18130 PF07715 TonB-dependent Receptor Plug Domain LMJ37_18130 PF00593 TonB dependent receptor LMJ37_18140 PF07883 Cupin domain LMJ37_18145 PF00171 Aldehyde dehydrogenase family LMJ37_18165 PF02735 Ku70/Ku80 beta-barrel domain LMJ37_18170 PF01070 FMN-dependent dehydrogenase LMJ37_18175 PF00144 Beta-lactamase LMJ37_18180 PF07730 Histidine kinase LMJ37_18185 PF00072 Response regulator receiver domain LMJ37_18185 PF00196 Bacterial regulatory proteins, luxR family LMJ37_18205 PF18500 CadC C-terminal domain 1 LMJ37_18205 PF00486 Transcriptional regulatory protein, C terminal LMJ37_18210 PF07055 Enoyl reductase FAD binding domain LMJ37_18210 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase LMJ37_18210 PF12241 Trans-2-enoyl-CoA reductase catalytic region LMJ37_18220 PF00294 pfkB family carbohydrate kinase LMJ37_18245 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LMJ37_18295 PF00128 Alpha amylase, catalytic domain LMJ37_18295 PF11896 Domain of unknown function (DUF3416) LMJ37_18300 PF00128 Alpha amylase, catalytic domain LMJ37_18300 PF16657 Maltogenic Amylase, C-terminal domain LMJ37_18305 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LMJ37_18305 PF00128 Alpha amylase, catalytic domain LMJ37_18305 PF02806 Alpha amylase, C-terminal all-beta domain LMJ37_18315 PF00248 Aldo/keto reductase family LMJ37_18320 PF00135 Carboxylesterase family LMJ37_18325 PF07859 alpha/beta hydrolase fold LMJ37_18325 PF13472 GDSL-like Lipase/Acylhydrolase family LMJ37_18335 PF03480 Bacterial extracellular solute-binding protein, family 7 LMJ37_18345 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LMJ37_18350 PF04616 Glycosyl hydrolases family 43 LMJ37_18350 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain LMJ37_18355 PF00356 Bacterial regulatory proteins, lacI family LMJ37_18360 PF04962 KduI/IolB family LMJ37_18375 PF00657 GDSL-like Lipase/Acylhydrolase LMJ37_18390 PF00351 Biopterin-dependent aromatic amino acid hydroxylase LMJ37_18395 PF01037 Lrp/AsnC ligand binding domain LMJ37_18400 PF07660 Secretin and TonB N terminus short domain LMJ37_18400 PF00593 TonB dependent receptor LMJ37_18400 PF07715 TonB-dependent Receptor Plug Domain LMJ37_18405 PF01734 Patatin-like phospholipase LMJ37_18415 PF00005 ABC transporter LMJ37_18430 PF00005 ABC transporter LMJ37_18435 PF00528 Binding-protein-dependent transport system inner membrane component LMJ37_18445 PF03781 Sulfatase-modifying factor enzyme 1 LMJ37_18445 PF12867 DinB superfamily LMJ37_18465 PF13657 HipA N-terminal domain LMJ37_18465 PF07804 HipA-like C-terminal domain LMJ37_18470 PF01381 Helix-turn-helix LMJ37_18490 PF10609 NUBPL iron-transfer P-loop NTPase LMJ37_18490 PF01883 Iron-sulfur cluster assembly protein LMJ37_18505 PF13091 PLD-like domain LMJ37_18510 PF03061 Thioesterase superfamily LMJ37_18540 PF08240 Alcohol dehydrogenase GroES-like domain LMJ37_18540 PF00107 Zinc-binding dehydrogenase LMJ37_18550 PF02673 Bacitracin resistance protein BacA LMJ37_18555 PF00120 Glutamine synthetase, catalytic domain LMJ37_18555 PF03951 Glutamine synthetase, beta-Grasp domain LMJ37_18560 PF00543 Nitrogen regulatory protein P-II LMJ37_18565 PF00909 Ammonium Transporter Family LMJ37_18570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_18570 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_18570 PF00989 PAS fold LMJ37_18575 PF00072 Response regulator receiver domain LMJ37_18575 PF02954 Bacterial regulatory protein, Fis family LMJ37_18575 PF00158 Sigma-54 interaction domain LMJ37_18580 PF00080 Copper/zinc superoxide dismutase (SODC) LMJ37_18585 PF00080 Copper/zinc superoxide dismutase (SODC) LMJ37_18595 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LMJ37_18605 PF02803 Thiolase, C-terminal domain LMJ37_18605 PF00108 Thiolase, N-terminal domain LMJ37_18640 PF00581 Rhodanese-like domain LMJ37_18645 PF02556 Preprotein translocase subunit SecB LMJ37_18650 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LMJ37_18650 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LMJ37_18700 PF01313 Bacterial export proteins, family 3 LMJ37_18710 PF01312 FlhB HrpN YscU SpaS Family LMJ37_18715 PF00771 FHIPEP family LMJ37_18720 PF00460 Flagella basal body rod protein LMJ37_18720 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LMJ37_18725 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LMJ37_18725 PF00460 Flagella basal body rod protein LMJ37_18735 PF02107 Flagellar L-ring protein LMJ37_18740 PF02119 Flagellar P-ring protein LMJ37_18755 PF02049 Flagellar hook-basal body complex protein FliE LMJ37_18760 PF01514 Secretory protein of YscJ/FliF family LMJ37_18760 PF08345 Flagellar M-ring protein C-terminal LMJ37_18775 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LMJ37_18775 PF02874 ATP synthase alpha/beta family, beta-barrel domain LMJ37_18775 PF18269 T3SS EscN ATPase C-terminal domain LMJ37_18790 PF03963 Flagellar hook capping protein - N-terminal region LMJ37_18795 PF07559 Flagellar basal body protein FlaE LMJ37_18795 PF00460 Flagella basal body rod protein LMJ37_18795 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LMJ37_18805 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LMJ37_18815 PF00813 FliP family LMJ37_18820 PF00140 Sigma-70 factor, region 1.2 LMJ37_18820 PF04539 Sigma-70 region 3 LMJ37_18820 PF04542 Sigma-70 region 2 LMJ37_18820 PF04545 Sigma-70, region 4 LMJ37_18825 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LMJ37_18825 PF00205 Thiamine pyrophosphate enzyme, central domain LMJ37_18825 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LMJ37_18830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_18835 PF02954 Bacterial regulatory protein, Fis family LMJ37_18835 PF00072 Response regulator receiver domain LMJ37_18835 PF00158 Sigma-54 interaction domain LMJ37_18850 PF07690 Major Facilitator Superfamily LMJ37_18855 PF00588 SpoU rRNA Methylase family LMJ37_18870 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LMJ37_18870 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LMJ37_18875 PF13784 Fic/DOC family N-terminal LMJ37_18875 PF02661 Fic/DOC family LMJ37_18880 PF00561 alpha/beta hydrolase fold LMJ37_18885 PF03692 Putative zinc- or iron-chelating domain LMJ37_18890 PF00501 AMP-binding enzyme LMJ37_18895 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family LMJ37_18910 PF01820 D-ala D-ala ligase N-terminus LMJ37_18910 PF07478 D-ala D-ala ligase C-terminus LMJ37_18920 PF03109 ABC1 family LMJ37_18930 PF00849 RNA pseudouridylate synthase LMJ37_18940 PF00472 RF-1 domain LMJ37_18950 PF01112 Asparaginase LMJ37_18955 PF01432 Peptidase family M3 LMJ37_18960 PF12706 Beta-lactamase superfamily domain LMJ37_18985 PF12833 Helix-turn-helix domain LMJ37_18990 PF00999 Sodium/hydrogen exchanger family LMJ37_18995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMJ37_18995 PF03466 LysR substrate binding domain LMJ37_19000 PF01274 Malate synthase LMJ37_19010 PF00463 Isocitrate lyase family LMJ37_19015 PF00990 Diguanylate cyclase, GGDEF domain LMJ37_19035 PF00326 Prolyl oligopeptidase family LMJ37_19040 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LMJ37_19040 PF18140 Propionyl-coenzyme A carboxylase BT domain LMJ37_19040 PF00289 Biotin carboxylase, N-terminal domain LMJ37_19040 PF02785 Biotin carboxylase C-terminal domain LMJ37_19040 PF00364 Biotin-requiring enzyme LMJ37_19045 PF01039 Carboxyl transferase domain LMJ37_19050 PF02770 Acyl-CoA dehydrogenase, middle domain LMJ37_19050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LMJ37_19050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LMJ37_19105 PF02492 CobW/HypB/UreG, nucleotide-binding domain LMJ37_19105 PF07683 Cobalamin synthesis protein cobW C-terminal domain LMJ37_19125 PF03969 AFG1-like ATPase LMJ37_19130 PF01047 MarR family LMJ37_19135 PF02566 OsmC-like protein LMJ37_19160 PF16884 N-terminal domain of oxidoreductase LMJ37_19160 PF00107 Zinc-binding dehydrogenase LMJ37_19165 PF00248 Aldo/keto reductase family LMJ37_19175 PF00849 RNA pseudouridylate synthase LMJ37_19180 PF00593 TonB dependent receptor LMJ37_19190 PF00270 DEAD/DEAH box helicase LMJ37_19190 PF04408 Helicase associated domain (HA2) LMJ37_19190 PF00271 Helicase conserved C-terminal domain LMJ37_19190 PF08482 ATP-dependent helicase C-terminal LMJ37_19195 PF07308 Protein of unknown function (DUF1456) LMJ37_19200 PF00576 HIUase/Transthyretin family LMJ37_19205 PF13454 FAD-NAD(P)-binding LMJ37_19210 PF09349 OHCU decarboxylase LMJ37_19210 PF01014 Uricase LMJ37_19225 PF00266 Aminotransferase class-V LMJ37_19230 PF01546 Peptidase family M20/M25/M40 LMJ37_19230 PF07687 Peptidase dimerisation domain LMJ37_19235 PF03466 LysR substrate binding domain LMJ37_19235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMJ37_19240 PF07690 Major Facilitator Superfamily LMJ37_19255 PF01425 Amidase LMJ37_19260 PF01156 Inosine-uridine preferring nucleoside hydrolase LMJ37_19270 PF00860 Permease family LMJ37_19275 PF00111 2Fe-2S iron-sulfur cluster binding domain LMJ37_19280 PF00355 Rieske [2Fe-2S] domain LMJ37_19285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMJ37_19285 PF03466 LysR substrate binding domain LMJ37_19290 PF01026 TatD related DNase LMJ37_19305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMJ37_19305 PF03466 LysR substrate binding domain LMJ37_19310 PF07690 Major Facilitator Superfamily LMJ37_19325 PF02146 Sir2 family LMJ37_19330 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LMJ37_19335 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LMJ37_19335 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LMJ37_19345 PF00551 Formyl transferase LMJ37_19350 PF00486 Transcriptional regulatory protein, C terminal LMJ37_19350 PF00072 Response regulator receiver domain LMJ37_19355 PF00672 HAMP domain LMJ37_19355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_19355 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_19360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LMJ37_19360 PF00529 HlyD membrane-fusion protein of T1SS LMJ37_19365 PF00873 AcrB/AcrD/AcrF family LMJ37_19370 PF02321 Outer membrane efflux protein LMJ37_19385 PF02677 Epoxyqueuosine reductase QueH LMJ37_19390 PF03466 LysR substrate binding domain LMJ37_19390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMJ37_19395 PF03358 NADPH-dependent FMN reductase LMJ37_19405 PF08267 Cobalamin-independent synthase, N-terminal domain LMJ37_19405 PF01717 Cobalamin-independent synthase, Catalytic domain LMJ37_19410 PF03812 2-keto-3-deoxygluconate permease LMJ37_19420 PF05368 NmrA-like family LMJ37_19425 PF01638 HxlR-like helix-turn-helix LMJ37_19455 PF13495 Phage integrase, N-terminal SAM-like domain LMJ37_19455 PF00589 Phage integrase family LMJ37_19460 PF00920 Dehydratase family LMJ37_19470 PF03692 Putative zinc- or iron-chelating domain LMJ37_19475 PF00132 Bacterial transferase hexapeptide (six repeats) LMJ37_19485 PF07690 Major Facilitator Superfamily LMJ37_19490 PF11871 Domain of unknown function (DUF3391) LMJ37_19490 PF01966 HD domain LMJ37_19510 PF00171 Aldehyde dehydrogenase family LMJ37_19520 PF01494 FAD binding domain LMJ37_19530 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LMJ37_19530 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LMJ37_19535 PF00230 Major intrinsic protein LMJ37_19540 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LMJ37_19540 PF01266 FAD dependent oxidoreductase LMJ37_19545 PF00455 DeoR C terminal sensor domain LMJ37_19545 PF08220 DeoR-like helix-turn-helix domain LMJ37_19550 PF00970 Oxidoreductase FAD-binding domain LMJ37_19550 PF00111 2Fe-2S iron-sulfur cluster binding domain LMJ37_19555 PF00355 Rieske [2Fe-2S] domain LMJ37_19560 PF01144 Coenzyme A transferase LMJ37_19565 PF01144 Coenzyme A transferase LMJ37_19570 PF02803 Thiolase, C-terminal domain LMJ37_19570 PF00108 Thiolase, N-terminal domain LMJ37_19575 PF00775 Dioxygenase LMJ37_19575 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal LMJ37_19580 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal LMJ37_19580 PF00775 Dioxygenase LMJ37_19585 PF10397 Adenylosuccinate lyase C-terminus LMJ37_19585 PF00206 Lyase LMJ37_19590 PF12146 Serine aminopeptidase, S33 LMJ37_19595 PF02627 Carboxymuconolactone decarboxylase family LMJ37_19605 PF09339 IclR helix-turn-helix domain LMJ37_19605 PF01614 Bacterial transcriptional regulator LMJ37_19615 PF07859 alpha/beta hydrolase fold LMJ37_19620 PF10677 Protein of unknown function (DUF2490) LMJ37_19625 PF01134 Glucose inhibited division protein A LMJ37_19625 PF13932 GidA associated domain LMJ37_19635 PF00291 Pyridoxal-phosphate dependent enzyme LMJ37_19655 PF13649 Methyltransferase domain LMJ37_19665 PF12697 Alpha/beta hydrolase family LMJ37_19675 PF00155 Aminotransferase class I and II LMJ37_19680 PF06968 Biotin and Thiamin Synthesis associated domain LMJ37_19680 PF04055 Radical SAM superfamily LMJ37_19690 PF01040 UbiA prenyltransferase family LMJ37_19705 PF05819 NolX protein LMJ37_19745 PF01313 Bacterial export proteins, family 3 LMJ37_19750 PF00813 FliP family LMJ37_19765 PF00771 FHIPEP family LMJ37_19770 PF01312 FlhB HrpN YscU SpaS Family LMJ37_19785 PF01514 Secretory protein of YscJ/FliF family LMJ37_19800 PF02874 ATP synthase alpha/beta family, beta-barrel domain LMJ37_19800 PF18269 T3SS EscN ATPase C-terminal domain LMJ37_19800 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LMJ37_19810 PF01311 Bacterial export proteins, family 1 LMJ37_19815 PF00263 Bacterial type II and III secretion system protein LMJ37_19815 PF03958 Bacterial type II/III secretion system short domain LMJ37_19825 PF01464 Transglycosylase SLT domain LMJ37_19855 PF03109 ABC1 family LMJ37_19860 PF05661 Protein of unknown function (DUF808) LMJ37_19865 PF00990 Diguanylate cyclase, GGDEF domain LMJ37_19870 PF08323 Starch synthase catalytic domain LMJ37_19870 PF00534 Glycosyl transferases group 1 LMJ37_19875 PF00128 Alpha amylase, catalytic domain LMJ37_19875 PF02806 Alpha amylase, C-terminal all-beta domain LMJ37_19875 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LMJ37_19880 PF00128 Alpha amylase, catalytic domain LMJ37_19880 PF11941 Domain of unknown function (DUF3459) LMJ37_19880 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LMJ37_19885 PF02446 4-alpha-glucanotransferase LMJ37_19890 PF00128 Alpha amylase, catalytic domain LMJ37_19900 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LMJ37_19900 PF00128 Alpha amylase, catalytic domain LMJ37_19905 PF13460 NAD(P)H-binding LMJ37_19920 PF06903 VirK protein LMJ37_19930 PF00271 Helicase conserved C-terminal domain LMJ37_19930 PF00270 DEAD/DEAH box helicase LMJ37_19935 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LMJ37_19935 PF00364 Biotin-requiring enzyme LMJ37_19945 PF02779 Transketolase, pyrimidine binding domain LMJ37_19945 PF02780 Transketolase, C-terminal domain LMJ37_19950 PF00676 Dehydrogenase E1 component LMJ37_19960 PF03301 Tryptophan 2,3-dioxygenase LMJ37_19965 PF00854 POT family LMJ37_19975 PF01047 MarR family LMJ37_19980 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LMJ37_19985 PF04480 Protein of unknown function (DUF559) LMJ37_19990 PF04209 homogentisate 1,2-dioxygenase LMJ37_20010 PF03334 Na+/H+ antiporter subunit LMJ37_20015 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) LMJ37_20025 PF00361 Proton-conducting membrane transporter LMJ37_20030 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LMJ37_20035 PF13244 Domain of unknown function (DUF4040) LMJ37_20035 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter LMJ37_20035 PF00361 Proton-conducting membrane transporter LMJ37_20035 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LMJ37_20050 PF01447 Thermolysin metallopeptidase, catalytic domain LMJ37_20050 PF07504 Fungalysin/Thermolysin Propeptide Motif LMJ37_20050 PF01483 Proprotein convertase P-domain LMJ37_20050 PF02868 Thermolysin metallopeptidase, alpha-helical domain LMJ37_20055 PF00182 Chitinase class I LMJ37_20075 PF01259 SAICAR synthetase LMJ37_20080 PF00226 DnaJ domain LMJ37_20080 PF05099 Tellurite resistance protein TerB LMJ37_20090 PF00834 Ribulose-phosphate 3 epimerase family LMJ37_20095 PF00583 Acetyltransferase (GNAT) family LMJ37_20100 PF00781 Diacylglycerol kinase catalytic domain LMJ37_20105 PF04715 Anthranilate synthase component I, N terminal region LMJ37_20105 PF00425 chorismate binding enzyme LMJ37_20115 PF00117 Glutamine amidotransferase class-I LMJ37_20125 PF02885 Glycosyl transferase family, helical bundle domain LMJ37_20125 PF00591 Glycosyl transferase family, a/b domain LMJ37_20130 PF00218 Indole-3-glycerol phosphate synthase LMJ37_20140 PF00325 Bacterial regulatory proteins, crp family LMJ37_20140 PF00027 Cyclic nucleotide-binding domain LMJ37_20145 PF02675 S-adenosylmethionine decarboxylase LMJ37_20150 PF00893 Small Multidrug Resistance protein LMJ37_20155 PF03232 Ubiquinone biosynthesis protein COQ7 LMJ37_20160 PF00572 Ribosomal protein L13 LMJ37_20165 PF00380 Ribosomal protein S9/S16 LMJ37_20180 PF00293 NUDIX domain LMJ37_20190 PF00210 Ferritin-like domain LMJ37_20195 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LMJ37_20195 PF00072 Response regulator receiver domain LMJ37_20195 PF01627 Hpt domain LMJ37_20195 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_20195 PF00672 HAMP domain LMJ37_20195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_20200 PF00486 Transcriptional regulatory protein, C terminal LMJ37_20200 PF00072 Response regulator receiver domain LMJ37_20220 PF01521 Iron-sulphur cluster biosynthesis LMJ37_20230 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain LMJ37_20230 PF00293 NUDIX domain LMJ37_20230 PF09297 NADH pyrophosphatase zinc ribbon domain LMJ37_20235 PF03186 CobD/Cbib protein LMJ37_20235 PF17113 Regulatory signalling modulator protein AmpE LMJ37_20250 PF07690 Major Facilitator Superfamily LMJ37_20255 PF03466 LysR substrate binding domain LMJ37_20255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMJ37_20260 PF07690 Major Facilitator Superfamily LMJ37_20265 PF12805 FUSC-like inner membrane protein yccS LMJ37_20275 PF02844 Phosphoribosylglycinamide synthetase, N domain LMJ37_20275 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LMJ37_20275 PF02843 Phosphoribosylglycinamide synthetase, C domain LMJ37_20285 PF01808 AICARFT/IMPCHase bienzyme LMJ37_20285 PF02142 MGS-like domain LMJ37_20290 PF01066 CDP-alcohol phosphatidyltransferase LMJ37_20295 PF12147 Putative methyltransferase LMJ37_20295 PF12146 Serine aminopeptidase, S33 LMJ37_20300 PF00782 Dual specificity phosphatase, catalytic domain LMJ37_20330 PF02954 Bacterial regulatory protein, Fis family LMJ37_20340 PF01381 Helix-turn-helix LMJ37_20365 PF02785 Biotin carboxylase C-terminal domain LMJ37_20365 PF00289 Biotin carboxylase, N-terminal domain LMJ37_20365 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LMJ37_20375 PF00364 Biotin-requiring enzyme LMJ37_20380 PF01220 Dehydroquinase class II LMJ37_20385 PF11412 Disulphide bond corrector protein DsbC LMJ37_20385 PF02683 Cytochrome C biogenesis protein transmembrane region LMJ37_20390 PF03091 CutA1 divalent ion tolerance protein LMJ37_20400 PF01852 START domain LMJ37_20410 PF00106 short chain dehydrogenase LMJ37_20415 PF04231 Endonuclease I LMJ37_20425 PF00166 Chaperonin 10 Kd subunit LMJ37_20430 PF00118 TCP-1/cpn60 chaperonin family LMJ37_20440 PF00593 TonB dependent receptor LMJ37_20440 PF07715 TonB-dependent Receptor Plug Domain LMJ37_20445 PF00793 DAHP synthetase I family LMJ37_20460 PF08450 SMP-30/Gluconolactonase/LRE-like region LMJ37_20470 PF08335 GlnD PII-uridylyltransferase LMJ37_20470 PF03710 Glutamate-ammonia ligase adenylyltransferase LMJ37_20475 PF02592 Putative vitamin uptake transporter LMJ37_20490 PF00881 Nitroreductase family LMJ37_20495 PF04264 YceI-like domain LMJ37_20520 PF16957 Malonate decarboxylase, alpha subunit, transporter LMJ37_20525 PF06857 Malonate decarboxylase delta subunit (MdcD) LMJ37_20530 PF01039 Carboxyl transferase domain LMJ37_20540 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG LMJ37_20545 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase LMJ37_20550 PF00698 Acyl transferase domain LMJ37_20550 PF16197 Ketoacyl-synthetase C-terminal extension LMJ37_20550 PF00109 Beta-ketoacyl synthase, N-terminal domain LMJ37_20550 PF02801 Beta-ketoacyl synthase, C-terminal domain LMJ37_20550 PF08659 KR domain LMJ37_20550 PF00550 Phosphopantetheine attachment site LMJ37_20560 PF00392 Bacterial regulatory proteins, gntR family LMJ37_20560 PF07729 FCD domain LMJ37_20565 PF13419 Haloacid dehalogenase-like hydrolase LMJ37_20595 PF07745 Glycosyl hydrolase family 53 LMJ37_20600 PF17831 Pyruvate dehydrogenase E1 component middle domain LMJ37_20600 PF00456 Transketolase, thiamine diphosphate binding domain LMJ37_20610 PF00145 C-5 cytosine-specific DNA methylase LMJ37_20615 PF03852 DNA mismatch endonuclease Vsr LMJ37_20670 PF00106 short chain dehydrogenase LMJ37_20685 PF00106 short chain dehydrogenase LMJ37_20695 PF13409 Glutathione S-transferase, N-terminal domain LMJ37_20715 PF12823 Domain of unknown function (DUF3817) LMJ37_20715 PF03176 MMPL family LMJ37_20720 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region LMJ37_20720 PF00326 Prolyl oligopeptidase family LMJ37_20725 PF07759 Protein of unknown function (DUF1615) LMJ37_20730 PF00990 Diguanylate cyclase, GGDEF domain LMJ37_20760 PF00892 EamA-like transporter family LMJ37_20765 PF00497 Bacterial extracellular solute-binding proteins, family 3 LMJ37_20775 PF00324 Amino acid permease LMJ37_20785 PF01544 CorA-like Mg2+ transporter protein LMJ37_20795 PF01204 Trehalase LMJ37_20805 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LMJ37_20805 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LMJ37_20830 PF08448 PAS fold LMJ37_20830 PF08447 PAS fold LMJ37_20830 PF00990 Diguanylate cyclase, GGDEF domain LMJ37_20830 PF00563 EAL domain LMJ37_20835 PF00672 HAMP domain LMJ37_20835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LMJ37_20835 PF02203 Tar ligand binding domain homologue LMJ37_20840 PF00553 Cellulose binding domain LMJ37_20840 PF00150 Cellulase (glycosyl hydrolase family 5) LMJ37_20845 PF01740 STAS domain LMJ37_20845 PF00916 Sulfate permease family LMJ37_20850 PF00990 Diguanylate cyclase, GGDEF domain LMJ37_20860 PF13632 Glycosyl transferase family group 2 LMJ37_20870 PF07694 5TMR of 5TMR-LYT LMJ37_20870 PF06580 Histidine kinase LMJ37_20875 PF04397 LytTr DNA-binding domain LMJ37_20875 PF00072 Response regulator receiver domain LMJ37_20880 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LMJ37_20880 PF03900 Porphobilinogen deaminase, C-terminal domain LMJ37_20905 PF00326 Prolyl oligopeptidase family LMJ37_20905 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LMJ37_20915 PF00155 Aminotransferase class I and II LMJ37_20920 PF00326 Prolyl oligopeptidase family LMJ37_20920 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LMJ37_20925 PF04304 Protein of unknown function (DUF454) LMJ37_20935 PF01678 Diaminopimelate epimerase LMJ37_20945 PF00589 Phage integrase family LMJ37_20945 PF02899 Phage integrase, N-terminal SAM-like domain LMJ37_20950 PF00227 Proteasome subunit LMJ37_20955 PF00004 ATPase family associated with various cellular activities (AAA) LMJ37_20955 PF10431 C-terminal, D2-small domain, of ClpB protein LMJ37_20955 PF07724 AAA domain (Cdc48 subfamily) LMJ37_20965 PF13673 Acetyltransferase (GNAT) domain LMJ37_20970 PF13533 Biotin-lipoyl like LMJ37_20980 PF01209 ubiE/COQ5 methyltransferase family LMJ37_20985 PF03707 Bacterial signalling protein N terminal repeat LMJ37_20985 PF00990 Diguanylate cyclase, GGDEF domain LMJ37_20985 PF00563 EAL domain LMJ37_20990 PF01433 Peptidase family M1 domain LMJ37_20990 PF11838 ERAP1-like C-terminal domain LMJ37_21005 PF13360 PQQ-like domain LMJ37_21010 PF00497 Bacterial extracellular solute-binding proteins, family 3 LMJ37_21025 PF00107 Zinc-binding dehydrogenase LMJ37_21025 PF08240 Alcohol dehydrogenase GroES-like domain LMJ37_21035 PF02954 Bacterial regulatory protein, Fis family LMJ37_21035 PF00158 Sigma-54 interaction domain LMJ37_21035 PF01590 GAF domain LMJ37_21040 PF00294 pfkB family carbohydrate kinase LMJ37_21050 PF04085 rod shape-determining protein MreC LMJ37_21060 PF03717 Penicillin-binding Protein dimerisation domain LMJ37_21060 PF00905 Penicillin binding protein transpeptidase domain LMJ37_21065 PF01098 Cell cycle protein LMJ37_21070 PF00295 Glycosyl hydrolases family 28 LMJ37_21075 PF13406 Transglycosylase SLT domain LMJ37_21080 PF03330 Lytic transglycolase LMJ37_21080 PF05036 Sporulation related domain LMJ37_21085 PF07943 Penicillin-binding protein 5, C-terminal domain LMJ37_21085 PF00768 D-alanyl-D-alanine carboxypeptidase LMJ37_21095 PF04359 Protein of unknown function (DUF493) LMJ37_21100 PF03099 Biotin/lipoate A/B protein ligase family LMJ37_21105 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LMJ37_21105 PF04055 Radical SAM superfamily LMJ37_21110 PF00595 PDZ domain LMJ37_21110 PF11818 C-terminal domain of tail specific protease (DUF3340) LMJ37_21110 PF03572 Peptidase family S41 LMJ37_21110 PF17804 Tail specific protease N-terminal domain LMJ37_21120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMJ37_21120 PF03466 LysR substrate binding domain LMJ37_21130 PF01467 Cytidylyltransferase-like LMJ37_21130 PF00293 NUDIX domain LMJ37_21165 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LMJ37_21165 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LMJ37_21170 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LMJ37_21170 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LMJ37_21175 PF04972 BON domain LMJ37_21180 PF01590 GAF domain LMJ37_21180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_21180 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_21180 PF08446 PAS fold LMJ37_21180 PF00360 Phytochrome region LMJ37_21185 PF00072 Response regulator receiver domain LMJ37_21190 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_21190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_21195 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LMJ37_21200 PF00106 short chain dehydrogenase LMJ37_21240 PF00263 Bacterial type II and III secretion system protein LMJ37_21240 PF03958 Bacterial type II/III secretion system short domain LMJ37_21245 PF00437 Type II/IV secretion system protein LMJ37_21250 PF00482 Type II secretion system (T2SS), protein F LMJ37_21255 PF07963 Prokaryotic N-terminal methylation motif LMJ37_21255 PF08334 Type II secretion system (T2SS), protein G LMJ37_21260 PF12019 Type II transport protein GspH LMJ37_21265 PF07963 Prokaryotic N-terminal methylation motif LMJ37_21265 PF02501 Type II secretion system (T2SS), protein I LMJ37_21270 PF11612 Type II secretion system (T2SS), protein J LMJ37_21270 PF07963 Prokaryotic N-terminal methylation motif LMJ37_21275 PF03934 Type II secretion system (T2SS), protein K LMJ37_21300 PF16355 Domain of unknown function (DUF4982) LMJ37_21300 PF00703 Glycosyl hydrolases family 2 LMJ37_21300 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LMJ37_21300 PF02837 Glycosyl hydrolases family 2, sugar binding domain LMJ37_21300 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 LMJ37_21315 PF00392 Bacterial regulatory proteins, gntR family LMJ37_21315 PF07702 UTRA domain LMJ37_21320 PF07690 Major Facilitator Superfamily LMJ37_21325 PF00356 Bacterial regulatory proteins, lacI family LMJ37_21330 PF01380 SIS domain LMJ37_21335 PF01979 Amidohydrolase family LMJ37_21345 PF01743 Poly A polymerase head domain LMJ37_21345 PF12627 Probable RNA and SrmB- binding site of polymerase A LMJ37_21345 PF01966 HD domain LMJ37_21350 PF05199 GMC oxidoreductase LMJ37_21350 PF00732 GMC oxidoreductase LMJ37_21355 PF00171 Aldehyde dehydrogenase family LMJ37_21360 PF02028 BCCT, betaine/carnitine/choline family transporter LMJ37_21375 PF01323 DSBA-like thioredoxin domain LMJ37_21385 PF00034 Cytochrome c LMJ37_21390 PF01926 50S ribosome-binding GTPase LMJ37_21395 PF10996 Beta-Casp domain LMJ37_21395 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LMJ37_21395 PF00753 Metallo-beta-lactamase superfamily LMJ37_21405 PF04107 Glutamate-cysteine ligase family 2(GCS2) LMJ37_21410 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_21410 PF00672 HAMP domain LMJ37_21410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_21415 PF00072 Response regulator receiver domain LMJ37_21415 PF00486 Transcriptional regulatory protein, C terminal LMJ37_21430 PF02583 Metal-sensitive transcriptional repressor LMJ37_21435 PF08240 Alcohol dehydrogenase GroES-like domain LMJ37_21435 PF00107 Zinc-binding dehydrogenase LMJ37_21440 PF04828 Glutathione-dependent formaldehyde-activating enzyme LMJ37_21445 PF00756 Putative esterase LMJ37_21450 PF00392 Bacterial regulatory proteins, gntR family LMJ37_21450 PF00155 Aminotransferase class I and II LMJ37_21455 PF02567 Phenazine biosynthesis-like protein LMJ37_21470 PF00005 ABC transporter LMJ37_21470 PF12848 ABC transporter LMJ37_21480 PF00464 Serine hydroxymethyltransferase LMJ37_21485 PF03477 ATP cone domain LMJ37_21495 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LMJ37_21495 PF01872 RibD C-terminal domain LMJ37_21505 PF00677 Lumazine binding domain LMJ37_21510 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LMJ37_21510 PF00925 GTP cyclohydrolase II LMJ37_21515 PF00885 6,7-dimethyl-8-ribityllumazine synthase LMJ37_21520 PF01029 NusB family LMJ37_21525 PF02769 AIR synthase related protein, C-terminal domain LMJ37_21525 PF00586 AIR synthase related protein, N-terminal domain LMJ37_21545 PF03814 Potassium-transporting ATPase A subunit LMJ37_21555 PF02669 K+-transporting ATPase, c chain LMJ37_21560 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_21560 PF02702 Osmosensitive K+ channel His kinase sensor domain LMJ37_21560 PF13492 GAF domain LMJ37_21560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_21560 PF13493 Domain of unknown function (DUF4118) LMJ37_21565 PF00072 Response regulator receiver domain LMJ37_21565 PF00486 Transcriptional regulatory protein, C terminal LMJ37_21580 PF02913 FAD linked oxidases, C-terminal domain LMJ37_21580 PF01565 FAD binding domain LMJ37_21585 PF04307 LexA-binding, inner membrane-associated putative hydrolase LMJ37_21590 PF02021 Uncharacterised protein family UPF0102 LMJ37_21600 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LMJ37_21630 PF02381 MraZ protein, putative antitoxin-like LMJ37_21635 PF01795 MraW methylase family LMJ37_21640 PF04999 Cell division protein FtsL LMJ37_21645 PF03717 Penicillin-binding Protein dimerisation domain LMJ37_21645 PF00905 Penicillin binding protein transpeptidase domain LMJ37_21650 PF01225 Mur ligase family, catalytic domain LMJ37_21650 PF02875 Mur ligase family, glutamate ligase domain LMJ37_21650 PF08245 Mur ligase middle domain LMJ37_21655 PF02875 Mur ligase family, glutamate ligase domain LMJ37_21655 PF08245 Mur ligase middle domain LMJ37_21655 PF01225 Mur ligase family, catalytic domain LMJ37_21660 PF00953 Glycosyl transferase family 4 LMJ37_21665 PF01098 Cell cycle protein LMJ37_21670 PF04101 Glycosyltransferase family 28 C-terminal domain LMJ37_21670 PF03033 Glycosyltransferase family 28 N-terminal domain LMJ37_21675 PF01225 Mur ligase family, catalytic domain LMJ37_21675 PF02875 Mur ligase family, glutamate ligase domain LMJ37_21675 PF08245 Mur ligase middle domain LMJ37_21680 PF07478 D-ala D-ala ligase C-terminus LMJ37_21680 PF01820 D-ala D-ala ligase N-terminus LMJ37_21685 PF03799 Cell division protein FtsQ LMJ37_21685 PF08478 POTRA domain, FtsQ-type LMJ37_21690 PF02491 SHS2 domain inserted in FTSA LMJ37_21695 PF12327 FtsZ family, C-terminal domain LMJ37_21695 PF00091 Tubulin/FtsZ family, GTPase domain LMJ37_21700 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LMJ37_21710 PF08525 Opacity-associated protein A N-terminal motif LMJ37_21710 PF01551 Peptidase family M23 LMJ37_21710 PF01476 LysM domain LMJ37_21715 PF02810 SEC-C motif LMJ37_21715 PF07517 SecA DEAD-like domain LMJ37_21715 PF01043 SecA preprotein cross-linking domain LMJ37_21715 PF07516 SecA Wing and Scaffold domain LMJ37_21720 PF00293 NUDIX domain LMJ37_21730 PF02219 Methylenetetrahydrofolate reductase LMJ37_21740 PF14765 Polyketide synthase dehydratase LMJ37_21740 PF08659 KR domain LMJ37_21740 PF02801 Beta-ketoacyl synthase, C-terminal domain LMJ37_21740 PF00109 Beta-ketoacyl synthase, N-terminal domain LMJ37_21740 PF16197 Ketoacyl-synthetase C-terminal extension LMJ37_21740 PF00107 Zinc-binding dehydrogenase LMJ37_21740 PF00550 Phosphopantetheine attachment site LMJ37_21740 PF08240 Alcohol dehydrogenase GroES-like domain LMJ37_21740 PF00698 Acyl transferase domain LMJ37_21745 PF00082 Subtilase family LMJ37_21745 PF09286 Pro-kumamolisin, activation domain LMJ37_21755 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LMJ37_21760 PF00128 Alpha amylase, catalytic domain LMJ37_21790 PF13649 Methyltransferase domain LMJ37_21795 PF05221 S-adenosyl-L-homocysteine hydrolase LMJ37_21795 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LMJ37_21805 PF00311 Phosphoenolpyruvate carboxylase LMJ37_21840 PF00328 Histidine phosphatase superfamily (branch 2) LMJ37_21845 PF02772 S-adenosylmethionine synthetase, central domain LMJ37_21845 PF00438 S-adenosylmethionine synthetase, N-terminal domain LMJ37_21845 PF02773 S-adenosylmethionine synthetase, C-terminal domain LMJ37_21855 PF13649 Methyltransferase domain LMJ37_21860 PF01207 Dihydrouridine synthase (Dus) LMJ37_21870 PF00294 pfkB family carbohydrate kinase LMJ37_21875 PF07670 Nucleoside recognition LMJ37_21875 PF07662 Na+ dependent nucleoside transporter C-terminus LMJ37_21875 PF01773 Na+ dependent nucleoside transporter N-terminus LMJ37_21880 PF00248 Aldo/keto reductase family LMJ37_21890 PF00593 TonB dependent receptor LMJ37_21890 PF07715 TonB-dependent Receptor Plug Domain LMJ37_21910 PF00528 Binding-protein-dependent transport system inner membrane component LMJ37_21915 PF00005 ABC transporter LMJ37_21925 PF02668 Taurine catabolism dioxygenase TauD, TfdA family LMJ37_21935 PF00005 ABC transporter LMJ37_21940 PF13472 GDSL-like Lipase/Acylhydrolase family LMJ37_21945 PF00072 Response regulator receiver domain LMJ37_21945 PF00486 Transcriptional regulatory protein, C terminal LMJ37_21950 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_21950 PF08521 Two-component sensor kinase N-terminal LMJ37_21950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_21960 PF01219 Prokaryotic diacylglycerol kinase LMJ37_21980 PF01790 Prolipoprotein diacylglyceryl transferase LMJ37_21985 PF00303 Thymidylate synthase LMJ37_21995 PF00186 Dihydrofolate reductase LMJ37_22000 PF00158 Sigma-54 interaction domain LMJ37_22005 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LMJ37_22005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LMJ37_22010 PF00005 ABC transporter LMJ37_22015 PF00528 Binding-protein-dependent transport system inner membrane component LMJ37_22025 PF00296 Luciferase-like monooxygenase LMJ37_22030 PF03358 NADPH-dependent FMN reductase LMJ37_22055 PF00296 Luciferase-like monooxygenase LMJ37_22060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LMJ37_22065 PF00528 Binding-protein-dependent transport system inner membrane component LMJ37_22070 PF00528 Binding-protein-dependent transport system inner membrane component LMJ37_22070 PF12911 N-terminal TM domain of oligopeptide transport permease C LMJ37_22075 PF00005 ABC transporter LMJ37_22075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LMJ37_22080 PF00149 Calcineurin-like phosphoesterase LMJ37_22085 PF04379 ApaG domain LMJ37_22090 PF00398 Ribosomal RNA adenine dimethylase LMJ37_22095 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LMJ37_22100 PF09312 SurA N-terminal domain LMJ37_22100 PF00639 PPIC-type PPIASE domain LMJ37_22105 PF04453 LPS transport system D LMJ37_22105 PF03968 OstA-like protein LMJ37_22110 PF00850 Histone deacetylase domain LMJ37_22115 PF01923 Cobalamin adenosyltransferase LMJ37_22130 PF01494 FAD binding domain LMJ37_22135 PF01494 FAD binding domain LMJ37_22155 PF07729 FCD domain LMJ37_22155 PF00392 Bacterial regulatory proteins, gntR family LMJ37_22160 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LMJ37_22165 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit LMJ37_22165 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LMJ37_22170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMJ37_22170 PF03466 LysR substrate binding domain LMJ37_22175 PF00501 AMP-binding enzyme LMJ37_22175 PF13193 AMP-binding enzyme C-terminal domain LMJ37_22180 PF00171 Aldehyde dehydrogenase family LMJ37_22185 PF00378 Enoyl-CoA hydratase/isomerase LMJ37_22205 PF08450 SMP-30/Gluconolactonase/LRE-like region LMJ37_22210 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LMJ37_22210 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LMJ37_22220 PF01728 FtsJ-like methyltransferase LMJ37_22220 PF18125 RlmM ferredoxin-like domain LMJ37_22240 PF00892 EamA-like transporter family LMJ37_22250 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LMJ37_22250 PF00749 tRNA synthetases class I (E and Q), catalytic domain LMJ37_22265 PF00990 Diguanylate cyclase, GGDEF domain LMJ37_22265 PF00072 Response regulator receiver domain LMJ37_22270 PF17149 Periplasmic sensor domain found in signal transduction proteins LMJ37_22270 PF00672 HAMP domain LMJ37_22270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_22270 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_22270 PF01627 Hpt domain LMJ37_22270 PF00072 Response regulator receiver domain LMJ37_22275 PF00072 Response regulator receiver domain LMJ37_22275 PF00196 Bacterial regulatory proteins, luxR family LMJ37_22285 PF01625 Peptide methionine sulfoxide reductase LMJ37_22295 PF00923 Transaldolase/Fructose-6-phosphate aldolase LMJ37_22300 PF01272 Transcription elongation factor, GreA/GreB, C-term LMJ37_22300 PF14760 Rnk N-terminus LMJ37_22305 PF03466 LysR substrate binding domain LMJ37_22305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMJ37_22310 PF13192 Thioredoxin domain LMJ37_22310 PF07992 Pyridine nucleotide-disulphide oxidoreductase LMJ37_22315 PF00578 AhpC/TSA family LMJ37_22315 PF10417 C-terminal domain of 1-Cys peroxiredoxin LMJ37_22320 PF05175 Methyltransferase small domain LMJ37_22320 PF17827 PrmC N-terminal domain LMJ37_22325 PF00561 alpha/beta hydrolase fold LMJ37_22335 PF00293 NUDIX domain LMJ37_22340 PF01367 5'-3' exonuclease, C-terminal SAM fold LMJ37_22340 PF00476 DNA polymerase family A LMJ37_22340 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LMJ37_22340 PF01612 3'-5' exonuclease LMJ37_22370 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LMJ37_22370 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LMJ37_22370 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LMJ37_22390 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LMJ37_22395 PF02233 NAD(P) transhydrogenase beta subunit LMJ37_22410 PF01063 Amino-transferase class IV LMJ37_22415 PF04151 Bacterial pre-peptidase C-terminal domain LMJ37_22415 PF00082 Subtilase family LMJ37_22420 PF00082 Subtilase family LMJ37_22420 PF04151 Bacterial pre-peptidase C-terminal domain LMJ37_22425 PF00082 Subtilase family LMJ37_22425 PF04151 Bacterial pre-peptidase C-terminal domain LMJ37_22430 PF04073 Aminoacyl-tRNA editing domain LMJ37_22450 PF03358 NADPH-dependent FMN reductase LMJ37_22455 PF03631 Virulence factor BrkB LMJ37_22460 PF08534 Redoxin LMJ37_22465 PF00708 Acylphosphatase LMJ37_22475 PF03976 Polyphosphate kinase 2 (PPK2) LMJ37_22480 PF00994 Probable molybdopterin binding domain LMJ37_22490 PF03462 PCRF domain LMJ37_22490 PF00472 RF-1 domain LMJ37_22495 PF01488 Shikimate / quinate 5-dehydrogenase LMJ37_22495 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LMJ37_22495 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LMJ37_22505 PF03550 Outer membrane lipoprotein LolB LMJ37_22510 PF08544 GHMP kinases C terminal LMJ37_22510 PF00288 GHMP kinases N terminal domain LMJ37_22520 PF14572 Phosphoribosyl synthetase-associated domain LMJ37_22520 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LMJ37_22525 PF01386 Ribosomal L25p family LMJ37_22525 PF14693 Ribosomal protein TL5, C-terminal domain LMJ37_22530 PF01195 Peptidyl-tRNA hydrolase LMJ37_22535 PF06071 Protein of unknown function (DUF933) LMJ37_22535 PF01926 50S ribosome-binding GTPase LMJ37_22555 PF03144 Elongation factor Tu domain 2 LMJ37_22555 PF00009 Elongation factor Tu GTP binding domain LMJ37_22555 PF03143 Elongation factor Tu C-terminal domain LMJ37_22565 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LMJ37_22570 PF00467 KOW motif LMJ37_22570 PF02357 Transcription termination factor nusG LMJ37_22575 PF00298 Ribosomal protein L11, RNA binding domain LMJ37_22575 PF03946 Ribosomal protein L11, N-terminal domain LMJ37_22580 PF00687 Ribosomal protein L1p/L10e family LMJ37_22585 PF00466 Ribosomal protein L10 LMJ37_22590 PF00542 Ribosomal protein L7/L12 C-terminal domain LMJ37_22590 PF16320 Ribosomal protein L7/L12 dimerisation domain LMJ37_22595 PF04565 RNA polymerase Rpb2, domain 3 LMJ37_22595 PF04560 RNA polymerase Rpb2, domain 7 LMJ37_22595 PF00562 RNA polymerase Rpb2, domain 6 LMJ37_22595 PF10385 RNA polymerase beta subunit external 1 domain LMJ37_22595 PF04563 RNA polymerase beta subunit LMJ37_22595 PF04561 RNA polymerase Rpb2, domain 2 LMJ37_22600 PF05000 RNA polymerase Rpb1, domain 4 LMJ37_22600 PF04997 RNA polymerase Rpb1, domain 1 LMJ37_22600 PF00623 RNA polymerase Rpb1, domain 2 LMJ37_22600 PF04983 RNA polymerase Rpb1, domain 3 LMJ37_22600 PF04998 RNA polymerase Rpb1, domain 5 LMJ37_22605 PF00164 Ribosomal protein S12/S23 LMJ37_22610 PF00177 Ribosomal protein S7p/S5e LMJ37_22615 PF03764 Elongation factor G, domain IV LMJ37_22615 PF14492 Elongation Factor G, domain II LMJ37_22615 PF00679 Elongation factor G C-terminus LMJ37_22615 PF03144 Elongation factor Tu domain 2 LMJ37_22615 PF00009 Elongation factor Tu GTP binding domain LMJ37_22620 PF03143 Elongation factor Tu C-terminal domain LMJ37_22620 PF03144 Elongation factor Tu domain 2 LMJ37_22620 PF00009 Elongation factor Tu GTP binding domain LMJ37_22625 PF00338 Ribosomal protein S10p/S20e LMJ37_22630 PF00297 Ribosomal protein L3 LMJ37_22635 PF00573 Ribosomal protein L4/L1 family LMJ37_22640 PF00276 Ribosomal protein L23 LMJ37_22645 PF00181 Ribosomal Proteins L2, RNA binding domain LMJ37_22645 PF03947 Ribosomal Proteins L2, C-terminal domain LMJ37_22650 PF00203 Ribosomal protein S19 LMJ37_22655 PF00237 Ribosomal protein L22p/L17e LMJ37_22660 PF00189 Ribosomal protein S3, C-terminal domain LMJ37_22660 PF07650 KH domain LMJ37_22665 PF00252 Ribosomal protein L16p/L10e LMJ37_22670 PF00831 Ribosomal L29 protein LMJ37_22675 PF00366 Ribosomal protein S17 LMJ37_22680 PF00238 Ribosomal protein L14p/L23e LMJ37_22685 PF00467 KOW motif LMJ37_22685 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LMJ37_22690 PF00281 Ribosomal protein L5 LMJ37_22690 PF00673 ribosomal L5P family C-terminus LMJ37_22695 PF00253 Ribosomal protein S14p/S29e LMJ37_22700 PF00410 Ribosomal protein S8 LMJ37_22705 PF00347 Ribosomal protein L6 LMJ37_22710 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LMJ37_22715 PF00333 Ribosomal protein S5, N-terminal domain LMJ37_22715 PF03719 Ribosomal protein S5, C-terminal domain LMJ37_22720 PF00327 Ribosomal protein L30p/L7e LMJ37_22725 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LMJ37_22730 PF00344 SecY translocase LMJ37_22735 PF00416 Ribosomal protein S13/S18 LMJ37_22740 PF00411 Ribosomal protein S11 LMJ37_22745 PF00163 Ribosomal protein S4/S9 N-terminal domain LMJ37_22745 PF01479 S4 domain LMJ37_22750 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LMJ37_22750 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LMJ37_22750 PF01000 RNA polymerase Rpb3/RpoA insert domain LMJ37_22755 PF01196 Ribosomal protein L17 LMJ37_22760 PF02600 Disulfide bond formation protein DsbB LMJ37_22775 PF01474 Class-II DAHP synthetase family LMJ37_22785 PF01425 Amidase LMJ37_22795 PF00009 Elongation factor Tu GTP binding domain LMJ37_22795 PF00679 Elongation factor G C-terminus LMJ37_22795 PF03144 Elongation factor Tu domain 2 LMJ37_22800 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LMJ37_22805 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LMJ37_22805 PF00056 lactate/malate dehydrogenase, NAD binding domain LMJ37_22810 PF00043 Glutathione S-transferase, C-terminal domain LMJ37_22810 PF02798 Glutathione S-transferase, N-terminal domain LMJ37_22820 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LMJ37_22820 PF07992 Pyridine nucleotide-disulphide oxidoreductase LMJ37_22825 PF08240 Alcohol dehydrogenase GroES-like domain LMJ37_22825 PF00107 Zinc-binding dehydrogenase LMJ37_22830 PF00691 OmpA family LMJ37_22830 PF05736 OprF membrane domain LMJ37_22870 PF00005 ABC transporter LMJ37_22870 PF17850 CysA C-terminal regulatory domain LMJ37_22870 PF12857 TOBE-like domain LMJ37_22880 PF08240 Alcohol dehydrogenase GroES-like domain LMJ37_22880 PF00107 Zinc-binding dehydrogenase LMJ37_22895 PF04185 Phosphoesterase family LMJ37_22895 PF05506 Domain of unknown function (DUF756) LMJ37_22905 PF10459 Peptidase S46 LMJ37_22910 PF00300 Histidine phosphatase superfamily (branch 1) LMJ37_22935 PF04305 Protein of unknown function (DUF455) LMJ37_22955 PF00149 Calcineurin-like phosphoesterase LMJ37_22960 PF01569 PAP2 superfamily LMJ37_22975 PF02503 Polyphosphate kinase middle domain LMJ37_22975 PF13090 Polyphosphate kinase C-terminal domain 2 LMJ37_22975 PF17941 Polyphosphate kinase C-terminal domain 1 LMJ37_22975 PF13089 Polyphosphate kinase N-terminal domain LMJ37_22980 PF11808 Phosphate regulon sensor protein PhoR LMJ37_22980 PF00989 PAS fold LMJ37_22980 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_22980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_22985 PF00486 Transcriptional regulatory protein, C terminal LMJ37_22985 PF00072 Response regulator receiver domain LMJ37_22990 PF13181 Tetratricopeptide repeat LMJ37_22990 PF01435 Peptidase family M48 LMJ37_22995 PF00462 Glutaredoxin LMJ37_23005 PF00180 Isocitrate/isopropylmalate dehydrogenase LMJ37_23040 PF00989 PAS fold LMJ37_23040 PF00512 His Kinase A (phospho-acceptor) domain LMJ37_23040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMJ37_23055 PF05697 Bacterial trigger factor protein (TF) LMJ37_23055 PF05698 Bacterial trigger factor protein (TF) C-terminus LMJ37_23060 PF00574 Clp protease LMJ37_23065 PF06689 ClpX C4-type zinc finger LMJ37_23065 PF10431 C-terminal, D2-small domain, of ClpB protein LMJ37_23065 PF07724 AAA domain (Cdc48 subfamily) LMJ37_23070 PF02190 ATP-dependent protease La (LON) substrate-binding domain LMJ37_23070 PF00004 ATPase family associated with various cellular activities (AAA) LMJ37_23070 PF05362 Lon protease (S16) C-terminal proteolytic domain LMJ37_23075 PF00216 Bacterial DNA-binding protein LMJ37_23100 PF01476 LysM domain LMJ37_23100 PF05257 CHAP domain LMJ37_23105 PF16123 Hydroxyacylglutathione hydrolase C-terminus LMJ37_23105 PF00753 Metallo-beta-lactamase superfamily LMJ37_23120 PF00929 Exonuclease LMJ37_23140 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LMJ37_23155 PF06463 Molybdenum Cofactor Synthesis C LMJ37_23155 PF04055 Radical SAM superfamily LMJ37_23170 PF01967 MoaC family LMJ37_23175 PF02597 ThiS family LMJ37_23180 PF02391 MoaE protein LMJ37_23205 PF13662 Toprim domain LMJ37_23205 PF02132 RecR protein LMJ37_23210 PF01230 HIT domain LMJ37_23220 PF01841 Transglutaminase-like superfamily LMJ37_23220 PF11992 Domain of unknown function (DUF3488) LMJ37_23220 PF13559 Domain of unknown function (DUF4129) LMJ37_23230 PF07726 ATPase family associated with various cellular activities (AAA) LMJ37_23230 PF17863 AAA lid domain LMJ37_23255 PF02674 Colicin V production protein LMJ37_23275 PF07015 VirC1 protein LMJ37_23295 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system LMJ37_23310 PF03432 Relaxase/Mobilisation nuclease domain LMJ37_23325 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LMJ37_23415 PF00239 Resolvase, N terminal domain LMJ37_23415 PF02796 Helix-turn-helix domain of resolvase LMJ37_23425 PF13180 PDZ domain LMJ37_23440 PF07015 VirC1 protein LMJ37_23445 PF00239 Resolvase, N terminal domain LMJ37_23445 PF02796 Helix-turn-helix domain of resolvase LMJ37_23460 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system LMJ37_23475 PF03432 Relaxase/Mobilisation nuclease domain LMJ37_23490 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain