locus-tag	class	description
LMJ37_00035	COG0156	8-amino-7-oxononanoate synthase activity
LMJ37_00045	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
LMJ37_00050	COG4208	sulfate ABC transporter
LMJ37_00065	COG1063	alcohol dehydrogenase
LMJ37_00115	COG2833	Protein of unknown function (DUF455)
LMJ37_00135	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LMJ37_00140	COG0671	phosphoesterase, PA-phosphatase related
LMJ37_00155	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
LMJ37_00185	COG0473	3-isopropylmalate dehydrogenase activity
LMJ37_00435	COG4695	Portal protein
LMJ37_00480	COG3852	Histidine kinase
LMJ37_00495	COG0544	peptidyl-prolyl cis-trans isomerase activity
LMJ37_00505	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
LMJ37_00535	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LMJ37_00545	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LMJ37_00555	COG0328	RNA-DNA hybrid ribonuclease activity
LMJ37_00560	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
LMJ37_00565	COG0631	protein serine/threonine phosphatase activity
LMJ37_00580	COG0859	PFAM glycosyl transferase family 9
LMJ37_00585	COG3642	lipopolysaccharide core region biosynthetic process
LMJ37_00590	COG1234	tRNA 3'-trailer cleavage
LMJ37_00595	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
LMJ37_00610	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
LMJ37_00635	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
LMJ37_00640	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
LMJ37_00645	COG0537	adenosine 5'-monophosphoramidase activity
LMJ37_00665	COG0714	Associated with various cellular activities
LMJ37_00685	COG0424	maF-like protein
LMJ37_00690	COG1399	metal-binding, possibly nucleic acid-binding protein
LMJ37_00695	COG0333	Belongs to the bacterial ribosomal protein bL32 family
LMJ37_00700	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LMJ37_00715	COG1028	Short-chain dehydrogenase reductase Sdr
LMJ37_00730	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
LMJ37_00735	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
LMJ37_00780	COG3829	transcription factor binding
LMJ37_00800	COG3609	addiction module antidote protein, CC2985 family
LMJ37_00825	COG2373	Large extracellular alpha-helical protein
LMJ37_00840	COG4953	penicillin-binding protein 1C
LMJ37_00850	COG0678	peroxiredoxin activity
LMJ37_00870	COG0330	HflC and HflK could
LMJ37_00875	COG0330	HflC and HflK could
LMJ37_00885	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
LMJ37_00890	COG0308	aminopeptidase N
LMJ37_00900	COG1028	Short-chain dehydrogenase reductase Sdr
LMJ37_00905	COG1309	transcriptional regulator
LMJ37_00935	COG0732	type I restriction modification DNA specificity domain
LMJ37_00965	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
LMJ37_00975	COG3387	PFAM Glycoside hydrolase 15-related
LMJ37_00980	COG1028	Short-chain dehydrogenase reductase Sdr
LMJ37_00990	COG3537	Alpha-1,2-mannosidase
LMJ37_00995	COG1028	Short-chain dehydrogenase reductase Sdr
LMJ37_01010	COG0492	ferredoxin-NADP+ reductase activity
LMJ37_01035	COG1529	Aldehyde oxidase and xanthine dehydrogenase
LMJ37_01040	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
LMJ37_01045	COG2080	2 iron, 2 sulfur cluster binding
LMJ37_01080	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
LMJ37_01095	COG0587	DNA-directed DNA polymerase activity
LMJ37_01115	COG1297	OPT oligopeptide transporter protein
LMJ37_01130	COG0823	Involved in the tonB-independent uptake of proteins
LMJ37_01130	COG1506	peptidase
LMJ37_01150	COG2207	Transcriptional regulator
LMJ37_01150	COG1917	Cupin 2, conserved barrel domain protein
LMJ37_01165	COG0753	catalase activity
LMJ37_01170	COG0656	L-ascorbic acid biosynthetic process
LMJ37_01180	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
LMJ37_01180	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
LMJ37_01185	COG2814	Major facilitator Superfamily
LMJ37_01200	COG2194	sulfuric ester hydrolase activity
LMJ37_01215	COG0745	RESPONSE REGULATOR receiver
LMJ37_01220	COG0642	Histidine kinase
LMJ37_01230	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
LMJ37_01235	COG2894	cell division
LMJ37_01240	COG0850	regulation of cytokinetic process
LMJ37_01250	COG4585	Histidine kinase
LMJ37_01255	COG2197	response regulator
LMJ37_01270	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
LMJ37_01300	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
LMJ37_01310	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
LMJ37_01330	COG1946	Acyl-CoA thioesterase
LMJ37_01345	COG0824	Thioesterase
LMJ37_01350	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
LMJ37_01355	COG0261	This protein binds to 23S rRNA in the presence of protein L20
LMJ37_01360	COG0211	Belongs to the bacterial ribosomal protein bL27 family
LMJ37_01365	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
LMJ37_01370	COG0268	Binds directly to 16S ribosomal RNA
LMJ37_01380	COG0196	riboflavin kinase activity
LMJ37_01385	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
LMJ37_01390	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
LMJ37_01395	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
LMJ37_01410	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
LMJ37_01415	COG1845	cytochrome c oxidase, subunit III
LMJ37_01420	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
LMJ37_01435	COG3152	Membrane
LMJ37_01445	COG2207	Transcriptional regulator
LMJ37_01450	COG0326	Molecular chaperone. Has ATPase activity
LMJ37_01460	COG1366	Belongs to the anti-sigma-factor antagonist family
LMJ37_01465	COG1366	Belongs to the anti-sigma-factor antagonist family
LMJ37_01470	COG2172	sigma factor antagonist activity
LMJ37_01495	COG4771	TonB-dependent receptor
LMJ37_01505	COG5507	3-demethylubiquinone-9 3-methyltransferase
LMJ37_01510	COG2205	protein histidine kinase activity
LMJ37_01520	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
LMJ37_01525	COG4999	Histidine kinase
LMJ37_01525	COG3850	Histidine kinase
LMJ37_01525	COG3437	response regulator, receiver
LMJ37_01525	COG2205	protein histidine kinase activity
LMJ37_01530	COG0784	Response regulator, receiver
LMJ37_01530	COG4191	Histidine kinase
LMJ37_01560	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LMJ37_01565	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LMJ37_01575	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
LMJ37_01580	COG0228	four-way junction DNA binding
LMJ37_01585	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
LMJ37_01590	COG0336	Belongs to the RNA methyltransferase TrmD family
LMJ37_01595	COG0335	large ribosomal subunit rRNA binding
LMJ37_01600	COG0534	Mate efflux family protein
LMJ37_01620	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
LMJ37_01630	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
LMJ37_01655	COG2963	transposase activity
LMJ37_01670	COG3250	beta-galactosidase activity
LMJ37_01675	COG3867	Arabinogalactan endo-beta-1,4-galactanase
LMJ37_01695	COG1960	acyl-CoA dehydrogenase activity
LMJ37_01700	COG1024	Enoyl-CoA hydratase
LMJ37_01735	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LMJ37_01740	COG0481	GTPase activity
LMJ37_01755	COG0571	ribonuclease III activity
LMJ37_01760	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
LMJ37_01765	COG1381	Involved in DNA repair and RecF pathway recombination
LMJ37_01775	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LMJ37_01780	COG2954	triphosphatase activity
LMJ37_01785	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
LMJ37_01790	COG3380	Catalyzes the oxidation of the 1,2-dihydro- and 1,6- dihydro- isomeric forms of beta-NAD(P) back to beta-NAD(P) . May serve to protect primary metabolism dehydrogenases from inhibition by the 1,2-dihydro- and 1,6-dihydro-beta-NAD(P) isomers
LMJ37_01795	COG3046	protein related to deoxyribodipyrimidine photolyase
LMJ37_01800	COG1472	Belongs to the glycosyl hydrolase 3 family
LMJ37_01805	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
LMJ37_01810	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
LMJ37_01815	COG1278	Cold shock
LMJ37_01825	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LMJ37_01840	COG1201	RNA secondary structure unwinding
LMJ37_01845	COG1793	dna ligase
LMJ37_01855	COG1793	dna ligase
LMJ37_01855	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
LMJ37_01885	COG0183	Belongs to the thiolase family
LMJ37_01910	COG1451	nucleotide metabolic process
LMJ37_01915	COG5487	UPF0391 membrane protein
LMJ37_01925	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
LMJ37_01940	COG1077	Cell shape determining protein MreB Mrl
LMJ37_01945	COG1047	Peptidyl-prolyl cis-trans
LMJ37_01955	COG2824	Alkylphosphonate utilization operon protein PhnA
LMJ37_01960	COG1902	pentaerythritol trinitrate reductase activity
LMJ37_01965	COG2814	Major facilitator Superfamily
LMJ37_02000	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
LMJ37_02000	COG0392	lysyltransferase activity
LMJ37_02010	COG0251	oxidation-reduction process
LMJ37_02015	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
LMJ37_02030	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
LMJ37_02055	COG1595	DNA-templated transcription, initiation
LMJ37_02070	COG2878	Part of a membrane complex involved in electron transport
LMJ37_02080	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LMJ37_02080	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LMJ37_02095	COG1131	(ABC) transporter
LMJ37_02100	COG0346	lactoylglutathione lyase activity
LMJ37_02105	COG0833	amino acid
LMJ37_02110	COG2040	homocysteine
LMJ37_02120	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
LMJ37_02140	COG1695	Transcriptional regulator
LMJ37_02160	COG1981	membrane
LMJ37_02175	COG0825	malonyl-CoA metabolic process
LMJ37_02185	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LMJ37_02190	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LMJ37_02195	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LMJ37_02200	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
LMJ37_02205	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LMJ37_02220	COG0750	zinc metalloprotease
LMJ37_02225	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
LMJ37_02230	COG0575	Belongs to the CDS family
LMJ37_02235	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
LMJ37_02240	COG0233	cytoplasmic translational termination
LMJ37_02245	COG0528	UMP kinase activity
LMJ37_02255	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
LMJ37_02260	COG0052	Belongs to the universal ribosomal protein uS2 family
LMJ37_02310	COG1393	Belongs to the ArsC family
LMJ37_02315	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LMJ37_02320	COG0367	asparagine synthase
LMJ37_02330	COG4774	siderophore transport
LMJ37_02345	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LMJ37_02370	COG1566	PFAM secretion protein HlyD family protein
LMJ37_02375	COG2814	Major facilitator Superfamily
LMJ37_02425	COG0339	signal peptide processing
LMJ37_02430	COG0386	Belongs to the glutathione peroxidase family
LMJ37_02485	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
LMJ37_02490	COG0084	hydrolase, TatD family'
LMJ37_02505	COG1960	acyl-CoA dehydrogenase activity
LMJ37_02520	COG0367	asparagine synthase
LMJ37_02530	COG0305	Participates in initiation and elongation during chromosome replication
LMJ37_02535	COG0415	Belongs to the DNA photolyase family
LMJ37_02545	COG0583	DNA-binding transcription factor activity
LMJ37_02590	COG3706	GGDEF domain
LMJ37_02750	COG0305	Participates in initiation and elongation during chromosome replication
LMJ37_02835	COG5484	DNA packaging
LMJ37_02835	COG3728	DNA packaging
LMJ37_02915	COG1196	nuclear chromosome segregation
LMJ37_02965	COG0582	viral genome integration into host DNA
LMJ37_02980	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
LMJ37_02995	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LMJ37_03005	COG0497	DNA recombination
LMJ37_03010	COG1420	regulation of RNA biosynthetic process
LMJ37_03015	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
LMJ37_03020	COG0443	Heat shock 70 kDa protein
LMJ37_03025	COG0484	heat shock protein binding
LMJ37_03060	COG0583	DNA-binding transcription factor activity
LMJ37_03065	COG1132	(ABC) transporter
LMJ37_03100	COG2850	peptidyl-arginine hydroxylation
LMJ37_03120	COG1253	flavin adenine dinucleotide binding
LMJ37_03150	COG1131	(ABC) transporter
LMJ37_03155	COG1725	Transcriptional regulator
LMJ37_03165	COG0386	Belongs to the glutathione peroxidase family
LMJ37_03180	COG2900	Belongs to the SlyX family
LMJ37_03205	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LMJ37_03215	COG1410	methionine synthase
LMJ37_03215	COG0646	methionine synthase
LMJ37_03220	COG1410	methionine synthase
LMJ37_03220	COG0646	methionine synthase
LMJ37_03225	COG2226	methyltransferase
LMJ37_03260	COG0557	exoribonuclease II activity
LMJ37_03270	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LMJ37_03280	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
LMJ37_03290	COG0704	Plays a role in the regulation of phosphate uptake
LMJ37_03295	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
LMJ37_03300	COG0581	inorganic phosphate transmembrane transporter activity
LMJ37_03305	COG0573	inorganic phosphate transmembrane transporter activity
LMJ37_03310	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
LMJ37_03335	COG0659	secondary active sulfate transmembrane transporter activity
LMJ37_03340	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
LMJ37_03350	COG1024	Enoyl-CoA hydratase
LMJ37_03360	COG0494	nUDIX hydrolase
LMJ37_03395	COG0488	(ABC) transporter
LMJ37_03405	COG0116	Belongs to the methyltransferase superfamily
LMJ37_03405	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
LMJ37_03410	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
LMJ37_03435	COG2925	Exonuclease
LMJ37_03445	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LMJ37_03450	COG3844	kynureninase activity
LMJ37_03460	COG0662	Cupin 2, conserved barrel domain protein
LMJ37_03465	COG0288	reversible hydration of carbon dioxide
LMJ37_03530	COG2808	Putative FMN-binding domain
LMJ37_03550	COG0017	Asparaginyl-tRNA synthetase
LMJ37_03555	COG0316	Belongs to the HesB IscA family
LMJ37_03560	COG0360	Binds together with S18 to 16S ribosomal RNA
LMJ37_03565	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
LMJ37_03570	COG0359	binds to the 23S rRNA
LMJ37_03580	COG3115	cell septum assembly
LMJ37_03590	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
LMJ37_03595	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
LMJ37_03600	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
LMJ37_03610	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
LMJ37_03620	COG4993	Dehydrogenase
LMJ37_03630	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
LMJ37_03640	COG2986	histidine ammonia-lyase
LMJ37_03645	COG1228	amidohydrolase
LMJ37_03690	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
LMJ37_03695	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
LMJ37_03700	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
LMJ37_03705	COG0077	Prephenate dehydratase
LMJ37_03705	COG1605	Chorismate mutase
LMJ37_03710	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
LMJ37_03725	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
LMJ37_03730	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
LMJ37_03735	COG0583	DNA-binding transcription factor activity
LMJ37_03750	COG0840	transmembrane signaling receptor activity
LMJ37_03775	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
LMJ37_03780	COG0784	Response regulator, receiver
LMJ37_03780	COG4191	Histidine kinase
LMJ37_03795	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LMJ37_03805	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
LMJ37_03815	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LMJ37_03830	COG1595	DNA-templated transcription, initiation
LMJ37_03880	COG2244	polysaccharide biosynthetic process
LMJ37_03910	COG2264	protein methyltransferase activity
LMJ37_03935	COG1136	(ABC) transporter
LMJ37_03945	COG0477	Major facilitator Superfamily
LMJ37_03950	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LMJ37_03965	COG1253	flavin adenine dinucleotide binding
LMJ37_03975	COG0306	phosphate transporter
LMJ37_04000	COG0504	CTP synthase activity
LMJ37_04005	COG2877	3-deoxy-8-phosphooctulonate synthase activity
LMJ37_04015	COG0148	phosphopyruvate hydratase activity
LMJ37_04020	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
LMJ37_04025	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
LMJ37_04030	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
LMJ37_04035	COG0585	pseudouridine synthase activity
LMJ37_04040	COG2840	Smr protein MutS2
LMJ37_04045	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
LMJ37_04050	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
LMJ37_04055	COG1238	metal cluster binding
LMJ37_04070	COG1534	Rna-binding protein
LMJ37_04075	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
LMJ37_04085	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
LMJ37_04090	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
LMJ37_04100	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LMJ37_04105	COG1546	Belongs to the CinA family
LMJ37_04115	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
LMJ37_04120	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
LMJ37_04125	COG2137	regulation of response to DNA damage stimulus
LMJ37_04130	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
LMJ37_04135	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
LMJ37_04305	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
LMJ37_04360	COG3179	chitinase
LMJ37_04440	COG1196	nuclear chromosome segregation
LMJ37_04500	COG0582	viral genome integration into host DNA
LMJ37_04510	COG1741	Belongs to the pirin family
LMJ37_04515	COG0583	DNA-binding transcription factor activity
LMJ37_04540	COG0351	phosphomethylpyrimidine kinase
LMJ37_04555	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
LMJ37_04560	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
LMJ37_04575	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LMJ37_04585	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
LMJ37_04590	COG3734	2-keto-3-deoxy-galactonokinase
LMJ37_04600	COG4948	Mandelate Racemase Muconate Lactonizing
LMJ37_04605	COG0800	Aldolase
LMJ37_04640	COG1501	Belongs to the glycosyl hydrolase 31 family
LMJ37_04650	COG1070	Carbohydrate kinase
LMJ37_04655	COG2115	Belongs to the xylose isomerase family
LMJ37_04660	COG0477	Major facilitator Superfamily
LMJ37_04680	COG0860	N-Acetylmuramoyl-L-alanine amidase
LMJ37_04685	COG1469	GTP cyclohydrolase I activity
LMJ37_04705	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
LMJ37_04710	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
LMJ37_04715	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
LMJ37_04720	COG0166	Belongs to the GPI family
LMJ37_04740	COG1472	Belongs to the glycosyl hydrolase 3 family
LMJ37_04750	COG3706	GGDEF domain
LMJ37_04750	COG4251	negative regulation of phosphorylation
LMJ37_04750	COG5001	Diguanylate cyclase
LMJ37_04750	COG2203	Gaf domain
LMJ37_04755	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
LMJ37_04760	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
LMJ37_04770	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
LMJ37_04775	COG0671	phosphoesterase, PA-phosphatase related
LMJ37_04790	COG1794	racemase activity, acting on amino acids and derivatives
LMJ37_04795	COG0697	spore germination
LMJ37_04800	COG0812	UDP-N-acetylmuramate dehydrogenase activity
LMJ37_04805	COG0167	dihydroorotate dehydrogenase activity
LMJ37_04820	COG1012	belongs to the aldehyde dehydrogenase family
LMJ37_04875	COG2003	Belongs to the UPF0758 family
LMJ37_04945	COG0758	DNA mediated transformation
LMJ37_05040	COG2814	Major facilitator Superfamily
LMJ37_05105	COG3621	Patatin-like phospholipase
LMJ37_05155	COG1215	transferase activity, transferring glycosyl groups
LMJ37_05160	COG0726	polysaccharide deacetylase
LMJ37_05160	COG1649	PFAM Uncharacterised BCR, COG1649
LMJ37_05235	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
LMJ37_05265	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LMJ37_05270	COG0124	histidyl-tRNA synthetase
LMJ37_05280	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
LMJ37_05285	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
LMJ37_05290	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
LMJ37_05295	COG0131	Imidazoleglycerol-phosphate dehydratase
LMJ37_05295	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
LMJ37_05300	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
LMJ37_05305	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
LMJ37_05310	COG0107	imidazoleglycerol-phosphate synthase activity
LMJ37_05315	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
LMJ37_05315	COG0140	phosphoribosyl-ATP diphosphatase activity
LMJ37_05330	COG4229	Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene)
LMJ37_05335	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
LMJ37_05340	COG0235	Class ii aldolase
LMJ37_05345	COG0531	amino acid
LMJ37_05350	COG0531	amino acid
LMJ37_05360	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
LMJ37_05365	COG0277	FAD linked oxidase domain protein
LMJ37_05385	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LMJ37_05430	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LMJ37_05435	COG2258	MOSC domain
LMJ37_05440	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
LMJ37_05445	COG0505	Belongs to the CarA family
LMJ37_05455	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
LMJ37_05460	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
LMJ37_05470	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
LMJ37_05480	COG3279	Response regulator of the LytR AlgR family
LMJ37_05490	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
LMJ37_05505	COG0784	Response regulator, receiver
LMJ37_05505	COG2198	Histidine kinase
LMJ37_05505	COG2205	protein histidine kinase activity
LMJ37_05510	COG1024	Enoyl-CoA hydratase
LMJ37_05515	COG0318	PFAM AMP-dependent synthetase and ligase
LMJ37_05545	COG2267	carboxylic ester hydrolase activity
LMJ37_05555	COG2201	protein-glutamate methylesterase activity
LMJ37_05560	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
LMJ37_05570	COG0840	transmembrane signaling receptor activity
LMJ37_05580	COG0835	chemotaxis
LMJ37_05590	COG0840	transmembrane signaling receptor activity
LMJ37_05600	COG0840	transmembrane signaling receptor activity
LMJ37_05605	COG0840	transmembrane signaling receptor activity
LMJ37_05615	COG0840	transmembrane signaling receptor activity
LMJ37_05625	COG0840	transmembrane signaling receptor activity
LMJ37_05630	COG0840	transmembrane signaling receptor activity
LMJ37_05635	COG0840	transmembrane signaling receptor activity
LMJ37_05640	COG0840	transmembrane signaling receptor activity
LMJ37_05650	COG0840	transmembrane signaling receptor activity
LMJ37_05670	COG2198	Histidine kinase
LMJ37_05670	COG0643	Histidine kinase
LMJ37_05675	COG0745	RESPONSE REGULATOR receiver
LMJ37_05685	COG0835	chemotaxis
LMJ37_05695	COG1360	Flagellar Motor Protein
LMJ37_05700	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
LMJ37_05780	COG0641	radical SAM
LMJ37_05790	COG0784	Response regulator, receiver
LMJ37_05790	COG2198	Histidine kinase
LMJ37_05790	COG0643	Histidine kinase
LMJ37_05820	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
LMJ37_05845	COG1684	flagellar biosynthetic protein fliR
LMJ37_05860	COG3190	flagellar
LMJ37_05910	COG1677	Flagellar hook-basal body complex protein FliE
LMJ37_05945	COG1028	Short-chain dehydrogenase reductase Sdr
LMJ37_05950	COG1028	Short-chain dehydrogenase reductase Sdr
LMJ37_05955	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LMJ37_05975	COG2201	protein-glutamate methylesterase activity
LMJ37_06005	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
LMJ37_06010	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
LMJ37_06015	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
LMJ37_06025	COG1705	Flagellar rod assembly protein muramidase FlgJ
LMJ37_06025	COG3951	Flagellar rod assembly protein muramidase FlgJ
LMJ37_06030	COG1706	bacterial-type flagellum-dependent cell motility
LMJ37_06035	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
LMJ37_06045	COG4787	bacterial-type flagellum-dependent cell motility
LMJ37_06055	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
LMJ37_06060	COG1558	bacterial-type flagellum-dependent cell motility
LMJ37_06070	COG0784	Response regulator, receiver
LMJ37_06070	COG0835	chemotaxis
LMJ37_06090	COG5002	protein histidine kinase activity
LMJ37_06120	COG2915	High frequency lysogenization protein hflD homolog
LMJ37_06125	COG0482	sulfurtransferase activity
LMJ37_06140	COG0542	response to heat
LMJ37_06150	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
LMJ37_06160	COG0492	ferredoxin-NADP+ reductase activity
LMJ37_06165	COG1674	ftsk spoiiie
LMJ37_06175	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
LMJ37_06185	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
LMJ37_06190	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LMJ37_06195	COG0183	Belongs to the thiolase family
LMJ37_06200	COG1250	3-hydroxyacyl-CoA dehydrogenase
LMJ37_06200	COG1024	Enoyl-CoA hydratase
LMJ37_06215	COG0820	rRNA (adenine-C2-)-methyltransferase activity
LMJ37_06225	COG1426	Protein conserved in bacteria
LMJ37_06235	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LMJ37_06240	COG1160	GTP binding
LMJ37_06245	COG0303	'Molybdopterin
LMJ37_06250	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
LMJ37_06290	COG0708	Exodeoxyribonuclease III
LMJ37_06300	COG0303	'Molybdopterin
LMJ37_06305	COG0746	molybdenum cofactor guanylyltransferase activity
LMJ37_06315	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
LMJ37_06315	COG1648	precorrin-2 dehydrogenase activity
LMJ37_06345	COG3685	Protein conserved in bacteria
LMJ37_06365	COG5001	Diguanylate cyclase
LMJ37_06375	COG4566	intracellular signal transduction
LMJ37_06410	COG3275	phosphorelay sensor kinase activity
LMJ37_06415	COG3279	Response regulator of the LytR AlgR family
LMJ37_06450	COG1238	metal cluster binding
LMJ37_06490	COG0653	protein targeting
LMJ37_06495	COG1028	Short-chain dehydrogenase reductase Sdr
LMJ37_06500	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
LMJ37_06505	COG1073	alpha beta
LMJ37_06505	COG2226	methyltransferase
LMJ37_06555	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
LMJ37_06555	COG0316	Belongs to the HesB IscA family
LMJ37_06560	COG2154	pterin-4-alpha-carbinolamine dehydratase
LMJ37_06570	COG0428	transporter
LMJ37_06575	COG3064	Membrane
LMJ37_06585	COG1530	ribonuclease E activity
LMJ37_06595	COG1054	Belongs to the UPF0176 family
LMJ37_06615	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
LMJ37_06655	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LMJ37_06660	COG0322	excinuclease ABC activity
LMJ37_06670	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
LMJ37_06675	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
LMJ37_06680	COG1663	tetraacyldisaccharide 4'-kinase activity
LMJ37_06685	COG1132	(ABC) transporter
LMJ37_06695	COG0811	peptide transport
LMJ37_06710	COG1136	(ABC) transporter
LMJ37_06715	COG4591	ABC-type transport system involved in lipoprotein release permease component
LMJ37_06725	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
LMJ37_06730	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
LMJ37_06745	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
LMJ37_06765	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
LMJ37_06770	COG0837	glucose binding
LMJ37_06775	COG0363	glucosamine-6-phosphate deaminase activity
LMJ37_06780	COG0129	dihydroxy-acid dehydratase activity
LMJ37_06785	COG0800	Aldolase
LMJ37_06850	COG0784	Response regulator, receiver
LMJ37_06850	COG2205	protein histidine kinase activity
LMJ37_06855	COG2183	response to ionizing radiation
LMJ37_06865	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LMJ37_06865	COG0723	plastoquinol--plastocyanin reductase activity
LMJ37_06880	COG3243	poly(R)-hydroxyalkanoic acid synthase
LMJ37_06890	COG1183	phosphatidylcholine synthase activity
LMJ37_06895	COG1028	Short-chain dehydrogenase reductase Sdr
LMJ37_06910	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
LMJ37_06920	COG0668	transmembrane transport
LMJ37_06925	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
LMJ37_06940	COG1914	H( )-stimulated, divalent metal cation uptake system
LMJ37_06960	COG2814	Major facilitator Superfamily
LMJ37_06975	COG1335	isochorismatase
LMJ37_06995	COG2197	response regulator
LMJ37_07015	COG0583	DNA-binding transcription factor activity
LMJ37_07020	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
LMJ37_07025	COG3002	Belongs to the UPF0753 family
LMJ37_07030	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
LMJ37_07115	COG0582	viral genome integration into host DNA
LMJ37_07120	COG0518	GMP synthase (glutamine-hydrolyzing) activity
LMJ37_07120	COG0519	Catalyzes the synthesis of GMP from XMP
LMJ37_07130	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
LMJ37_07140	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
LMJ37_07140	COG0475	glutathione-regulated potassium exporter activity
LMJ37_07145	COG1210	Utp--glucose-1-phosphate uridylyltransferase
LMJ37_07155	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LMJ37_07160	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
LMJ37_07170	COG0776	regulation of translation
LMJ37_07175	COG0539	negative regulation of cytoplasmic translation
LMJ37_07180	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
LMJ37_07195	COG2957	Belongs to the agmatine deiminase family
LMJ37_07200	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LMJ37_07225	COG0395	ABC-type sugar transport system, permease component
LMJ37_07230	COG1175	transmembrane transport
LMJ37_07260	COG2350	Protein conserved in bacteria
LMJ37_07265	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
LMJ37_07270	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
LMJ37_07275	COG1187	pseudouridine synthase activity
LMJ37_07295	COG0436	Aminotransferase
LMJ37_07300	COG4133	protoheme IX ABC transporter activity
LMJ37_07320	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
LMJ37_07325	COG1138	Cytochrome C-type biogenesis protein
LMJ37_07345	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
LMJ37_07350	COG1278	Cold shock
LMJ37_07355	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
LMJ37_07360	COG4988	ABC transporter
LMJ37_07370	COG1294	oxidase, subunit
LMJ37_07400	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
LMJ37_07405	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
LMJ37_07415	COG0165	Argininosuccinate lyase
LMJ37_07420	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
LMJ37_07430	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
LMJ37_07435	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LMJ37_07445	COG0137	argininosuccinate synthase activity
LMJ37_07450	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
LMJ37_07460	COG0215	cysteine-tRNA ligase activity
LMJ37_07465	COG2166	iron-sulfur cluster assembly
LMJ37_07485	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
LMJ37_07490	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
LMJ37_07515	COG4302	ethanolamine ammonia-lyase activity
LMJ37_07570	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
LMJ37_07575	COG0402	S-adenosylhomocysteine deaminase activity
LMJ37_07585	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LMJ37_07590	COG1509	lysine 2,3-aminomutase activity
LMJ37_07595	COG5001	Diguanylate cyclase
LMJ37_07595	COG3300	MHYT domain
LMJ37_07610	COG0483	inositol monophosphate 1-phosphatase activity
LMJ37_07615	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
LMJ37_07630	COG0488	(ABC) transporter
LMJ37_07635	COG0513	Belongs to the DEAD box helicase family
LMJ37_07640	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
LMJ37_07645	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
LMJ37_07655	COG0625	glutathione transferase activity
LMJ37_07665	COG4681	YaeQ
LMJ37_07670	COG2081	HI0933 family
LMJ37_07680	COG0501	Belongs to the peptidase M48B family
LMJ37_07685	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LMJ37_07690	COG1028	Short-chain dehydrogenase reductase Sdr
LMJ37_07715	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
LMJ37_07720	COG0860	N-Acetylmuramoyl-L-alanine amidase
LMJ37_07725	COG0802	atpase or kinase
LMJ37_07730	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
LMJ37_07730	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
LMJ37_07735	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
LMJ37_07740	COG1570	exodeoxyribonuclease VII activity
LMJ37_07750	COG1262	PFAM Formylglycine-generating sulfatase enzyme
LMJ37_07795	COG0835	chemotaxis
LMJ37_07800	COG0840	transmembrane signaling receptor activity
LMJ37_07805	COG2094	Belongs to the DNA glycosylase MPG family
LMJ37_07810	COG1201	RNA secondary structure unwinding
LMJ37_07830	COG2969	positive regulation of protein catabolic process
LMJ37_07835	COG0625	glutathione transferase activity
LMJ37_07840	COG2857	Cytochrome c1
LMJ37_07845	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
LMJ37_07850	COG0723	plastoquinol--plastocyanin reductase activity
LMJ37_07855	COG0741	lytic transglycosylase activity
LMJ37_07870	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
LMJ37_07875	COG1702	phosphate starvation-inducible protein PhoH
LMJ37_07885	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
LMJ37_07895	COG4535	Mg2 and Co2 transporter CorC
LMJ37_07910	COG1012	belongs to the aldehyde dehydrogenase family
LMJ37_07915	COG1177	transmembrane transport
LMJ37_07920	COG1176	ABC-type spermidine putrescine transport system, permease component I
LMJ37_07945	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
LMJ37_07965	COG0174	glutamine synthetase
LMJ37_07970	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LMJ37_07980	COG2703	oxygen carrier activity
LMJ37_07985	COG0477	Major facilitator Superfamily
LMJ37_07995	COG0243	molybdopterin cofactor binding
LMJ37_08000	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
LMJ37_08005	COG2223	nitrite transmembrane transporter activity
LMJ37_08010	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
LMJ37_08020	COG2733	membrane
LMJ37_08025	COG0784	Response regulator, receiver
LMJ37_08025	COG2205	protein histidine kinase activity
LMJ37_08025	COG5002	protein histidine kinase activity
LMJ37_08035	COG0477	Major facilitator Superfamily
LMJ37_08050	COG2902	Dehydrogenase
LMJ37_08060	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LMJ37_08065	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LMJ37_08075	COG1609	Transcriptional regulator
LMJ37_08080	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
LMJ37_08080	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LMJ37_08085	COG1105	Belongs to the carbohydrate kinase PfkB family
LMJ37_08090	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LMJ37_08090	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LMJ37_08110	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LMJ37_08120	COG1862	Preprotein translocase
LMJ37_08125	COG0343	queuine tRNA-ribosyltransferase activity
LMJ37_08130	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
LMJ37_08165	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
LMJ37_08170	COG3291	Pkd domain containing protein
LMJ37_08175	COG0405	Gamma-glutamyltransferase
LMJ37_08180	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
LMJ37_08190	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
LMJ37_08195	COG0742	ribosomal rna small subunit methyltransferase
LMJ37_08200	COG0326	Molecular chaperone. Has ATPase activity
LMJ37_08305	COG0531	amino acid
LMJ37_08320	COG0006	proline dipeptidase activity
LMJ37_08330	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LMJ37_08345	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LMJ37_08350	COG3938	Belongs to the proline racemase family
LMJ37_08360	COG0552	protein localization to endoplasmic reticulum
LMJ37_08365	COG1194	a g-specific adenine glycosylase
LMJ37_08370	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
LMJ37_08375	COG0784	Response regulator, receiver
LMJ37_08375	COG4191	Histidine kinase
LMJ37_08390	COG0322	excinuclease ABC activity
LMJ37_08405	COG3040	lipid binding
LMJ37_08420	COG1960	acyl-CoA dehydrogenase activity
LMJ37_08430	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
LMJ37_08450	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LMJ37_08455	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LMJ37_08460	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LMJ37_08485	COG0438	transferase activity, transferring glycosyl groups
LMJ37_08495	COG0438	transferase activity, transferring glycosyl groups
LMJ37_08500	COG0438	transferase activity, transferring glycosyl groups
LMJ37_08555	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LMJ37_08555	COG0072	phenylalanine-tRNA ligase activity
LMJ37_08575	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
LMJ37_08580	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
LMJ37_08595	COG2211	Major facilitator Superfamily
LMJ37_08605	COG1082	Xylose isomerase domain protein TIM barrel
LMJ37_08620	COG0366	Alpha amylase catalytic
LMJ37_08740	COG3702	type iv secretory pathway
LMJ37_08760	COG2948	multi-organism process
LMJ37_08780	COG3505	Type IV secretory pathway VirD4
LMJ37_08795	COG0556	nucleotide-excision repair
LMJ37_08840	COG1611	Belongs to the LOG family
LMJ37_08850	COG2095	MarC family integral membrane protein
LMJ37_08860	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
LMJ37_08895	COG1185	polyribonucleotide nucleotidyltransferase activity
LMJ37_08900	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
LMJ37_08905	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
LMJ37_08910	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
LMJ37_08915	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
LMJ37_08920	COG0195	Participates in both transcription termination and antitermination
LMJ37_08925	COG0779	Required for maturation of 30S ribosomal subunits
LMJ37_08935	COG1007	ATP synthesis coupled electron transport
LMJ37_08960	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LMJ37_08965	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
LMJ37_08975	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
LMJ37_08980	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
LMJ37_08985	COG0649	NAD binding
LMJ37_08990	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LMJ37_08995	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LMJ37_09000	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LMJ37_09015	COG0149	triose-phosphate isomerase activity
LMJ37_09020	COG0300	oxidoreductase activity
LMJ37_09050	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LMJ37_09055	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
LMJ37_09060	COG0159	tryptophan synthase activity
LMJ37_09070	COG0133	tryptophan synthase activity
LMJ37_09080	COG0135	phosphoribosylanthranilate isomerase activity
LMJ37_09085	COG0101	tRNA pseudouridine synthase activity
LMJ37_09105	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LMJ37_09110	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LMJ37_09115	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
LMJ37_09120	COG2890	protein-(glutamine-N5) methyltransferase activity
LMJ37_09130	COG0688	phosphatidylethanolamine metabolic process
LMJ37_09140	COG0433	COG0433 Predicted ATPase
LMJ37_09145	COG0494	nUDIX hydrolase
LMJ37_09160	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
LMJ37_09165	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
LMJ37_09175	COG2336	PFAM SpoVT AbrB
LMJ37_09225	COG0420	3'-5' exonuclease activity
LMJ37_09255	COG0717	Belongs to the dCTP deaminase family
LMJ37_09260	COG0489	protein tyrosine kinase activity
LMJ37_09280	COG3590	peptidase
LMJ37_09285	COG3590	peptidase
LMJ37_09305	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LMJ37_09310	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LMJ37_09315	COG2311	Membrane
LMJ37_09320	COG1047	Peptidyl-prolyl cis-trans
LMJ37_09325	COG0791	NLP P60 protein
LMJ37_09330	COG0791	NLP P60 protein
LMJ37_09340	COG4106	trans-aconitate 2-methyltransferase activity
LMJ37_09345	COG1301	dicarboxylic acid transport
LMJ37_09350	COG1785	Belongs to the alkaline phosphatase family
LMJ37_09355	COG0037	tRNA processing
LMJ37_09360	COG1722	exodeoxyribonuclease VII activity
LMJ37_09365	COG0142	geranyltranstransferase activity
LMJ37_09370	COG4104	PAAR repeat-containing protein
LMJ37_09380	COG0312	modulator of DNA gyrase
LMJ37_09385	COG3028	Belongs to the UPF0307 family
LMJ37_09390	COG0312	modulator of DNA gyrase
LMJ37_09400	COG3164	Protein of unknown function
LMJ37_09410	COG0424	maF-like protein
LMJ37_09415	COG2968	Membrane
LMJ37_09430	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
LMJ37_09445	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
LMJ37_09460	COG0495	leucyl-tRNA aminoacylation
LMJ37_09470	COG3118	belongs to the thioredoxin family
LMJ37_09495	COG2155	Conserved Protein
LMJ37_09540	COG1132	(ABC) transporter
LMJ37_09570	COG1538	Outer membrane efflux protein
LMJ37_09575	COG0745	RESPONSE REGULATOR receiver
LMJ37_09580	COG5000	phosphorelay sensor kinase activity
LMJ37_09580	COG5002	protein histidine kinase activity
LMJ37_09585	COG0475	glutathione-regulated potassium exporter activity
LMJ37_09595	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
LMJ37_09615	COG1187	pseudouridine synthase activity
LMJ37_09620	COG5001	Diguanylate cyclase
LMJ37_09620	COG5002	protein histidine kinase activity
LMJ37_09725	COG2951	lytic endotransglycosylase activity
LMJ37_09745	COG2369	cell adhesion
LMJ37_09790	COG0667	Aldo Keto reductase
LMJ37_09795	COG2814	Major facilitator Superfamily
LMJ37_09800	COG0583	DNA-binding transcription factor activity
LMJ37_09805	COG2207	Transcriptional regulator
LMJ37_09820	COG0667	Aldo Keto reductase
LMJ37_09825	COG1309	transcriptional regulator
LMJ37_09835	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LMJ37_09850	COG0735	belongs to the Fur family
LMJ37_09855	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LMJ37_09880	COG4452	Inner membrane protein CreD
LMJ37_09895	COG2205	protein histidine kinase activity
LMJ37_09900	COG0745	RESPONSE REGULATOR receiver
LMJ37_09905	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
LMJ37_09915	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
LMJ37_09925	COG0643	Histidine kinase
LMJ37_09925	COG2198	Histidine kinase
LMJ37_09930	COG0840	transmembrane signaling receptor activity
LMJ37_09935	COG0835	chemotaxis
LMJ37_09940	COG2199	diguanylate cyclase activity
LMJ37_09940	COG2202	Pas domain
LMJ37_09940	COG2200	EAL domain
LMJ37_09945	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
LMJ37_09950	COG2201	protein-glutamate methylesterase activity
LMJ37_09955	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LMJ37_09960	COG3590	peptidase
LMJ37_09970	COG0588	phosphoglycerate mutase activity
LMJ37_09975	COG1515	deoxyribonuclease V activity
LMJ37_09985	COG1741	Belongs to the pirin family
LMJ37_10000	COG1741	Belongs to the pirin family
LMJ37_10005	COG1966	Carbon starvation protein
LMJ37_10045	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
LMJ37_10050	COG1529	Aldehyde oxidase and xanthine dehydrogenase
LMJ37_10055	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
LMJ37_10060	COG2080	2 iron, 2 sulfur cluster binding
LMJ37_10070	COG4251	negative regulation of phosphorylation
LMJ37_10070	COG3706	GGDEF domain
LMJ37_10070	COG2203	Gaf domain
LMJ37_10070	COG5001	Diguanylate cyclase
LMJ37_10075	COG0629	single-stranded DNA binding
LMJ37_10080	COG0142	geranyltranstransferase activity
LMJ37_10090	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
LMJ37_10105	COG0527	aspartate kinase activity
LMJ37_10110	COG0384	phenazine biosynthesis protein PhzF
LMJ37_10115	COG0384	phenazine biosynthesis protein PhzF
LMJ37_10125	COG1764	response to oxidative stress
LMJ37_10130	COG0540	Belongs to the ATCase OTCase family
LMJ37_10135	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
LMJ37_10140	COG1678	Uncharacterized ACR, COG1678
LMJ37_10145	COG0519	Catalyzes the synthesis of GMP from XMP
LMJ37_10170	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
LMJ37_10185	COG0739	heme binding
LMJ37_10205	COG0693	protein deglycase activity
LMJ37_10215	COG1959	2 iron, 2 sulfur cluster binding
LMJ37_10220	COG0719	Fe-S assembly protein
LMJ37_10225	COG0396	ATPase activity
LMJ37_10230	COG0719	Fe-S assembly protein
LMJ37_10235	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
LMJ37_10245	COG2146	nitrite reductase [NAD(P)H] activity
LMJ37_10250	COG4774	siderophore transport
LMJ37_10255	COG3128	pkhd-type hydroxylase
LMJ37_10280	COG1477	protein flavinylation
LMJ37_10285	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
LMJ37_10300	COG1555	photosystem II stabilization
LMJ37_10315	COG3178	'Phosphotransferase
LMJ37_10320	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
LMJ37_10330	COG0628	permease
LMJ37_10340	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
LMJ37_10350	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
LMJ37_10370	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
LMJ37_10375	COG0271	Belongs to the BolA IbaG family
LMJ37_10385	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
LMJ37_10395	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
LMJ37_10400	COG1137	ATPase activity
LMJ37_10415	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LMJ37_10420	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
LMJ37_10425	COG1660	Displays ATPase and GTPase activities
LMJ37_10435	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LMJ37_10440	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LMJ37_10445	COG2239	Acts as a magnesium transporter
LMJ37_10460	COG1294	oxidase, subunit
LMJ37_10465	COG1271	oxidase subunit
LMJ37_10475	COG1113	amino acid transport
LMJ37_10495	COG2197	response regulator
LMJ37_10505	COG0531	amino acid
LMJ37_10525	COG1234	tRNA 3'-trailer cleavage
LMJ37_10585	COG0754	glutathionylspermidine amidase activity
LMJ37_10610	COG1842	Phage shock protein A
LMJ37_10620	COG0259	pyridoxamine-phosphate oxidase activity
LMJ37_10625	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
LMJ37_10630	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
LMJ37_10640	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
LMJ37_10645	COG0477	Major facilitator Superfamily
LMJ37_10665	COG0784	Response regulator, receiver
LMJ37_10665	COG2205	protein histidine kinase activity
LMJ37_10665	COG2198	Histidine kinase
LMJ37_10670	COG2353	YceI-like domain
LMJ37_10690	COG1760	l-serine dehydratase
LMJ37_10700	COG0460	homoserine dehydrogenase
LMJ37_10700	COG0527	aspartate kinase activity
LMJ37_10705	COG0626	cystathionine gamma-synthase activity
LMJ37_10710	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
LMJ37_10715	COG0739	heme binding
LMJ37_10720	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
LMJ37_10725	COG1272	protein, Hemolysin III
LMJ37_10730	COG2982	Protein involved in outer membrane biogenesis
LMJ37_10735	COG0516	GMP reductase activity
LMJ37_10735	COG0517	IMP dehydrogenase activity
LMJ37_10740	COG0463	Glycosyl transferase, family 2
LMJ37_10745	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LMJ37_10750	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
LMJ37_10760	COG4771	TonB-dependent receptor
LMJ37_10765	COG1309	transcriptional regulator
LMJ37_10775	COG1960	acyl-CoA dehydrogenase activity
LMJ37_10805	COG0509	glycine decarboxylation via glycine cleavage system
LMJ37_10810	COG0404	The glycine cleavage system catalyzes the degradation of glycine
LMJ37_10830	COG1742	UPF0060 membrane protein
LMJ37_10835	COG3956	TIGRFAM MazG family protein
LMJ37_10845	COG0494	nUDIX hydrolase
LMJ37_10855	COG1385	rRNA (uridine-N3-)-methyltransferase activity
LMJ37_10860	COG0837	glucose binding
LMJ37_10875	COG1388	LysM domain
LMJ37_10875	COG3858	chitin binding
LMJ37_10880	COG3525	Glycosyl hydrolase, family 20, catalytic domain
LMJ37_10890	COG1472	Belongs to the glycosyl hydrolase 3 family
LMJ37_10905	COG0531	amino acid
LMJ37_10915	COG1486	melibiose metabolic process
LMJ37_10925	COG3537	Alpha-1,2-mannosidase
LMJ37_10960	COG3142	Participates in the control of copper homeostasis
LMJ37_10965	COG1446	asparaginase
LMJ37_10990	COG0643	Histidine kinase
LMJ37_10990	COG0784	Response regulator, receiver
LMJ37_10990	COG2198	Histidine kinase
LMJ37_10995	COG0840	transmembrane signaling receptor activity
LMJ37_11000	COG0835	chemotaxis
LMJ37_11015	COG0189	ligase activity
LMJ37_11025	COG1397	ADP-ribosylglycohydrolase
LMJ37_11035	COG1199	ATP-dependent helicase activity
LMJ37_11045	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LMJ37_11050	COG1215	transferase activity, transferring glycosyl groups
LMJ37_11060	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LMJ37_11070	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
LMJ37_11075	COG5424	Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ
LMJ37_11080	COG0535	radical SAM domain protein
LMJ37_11085	COG0535	radical SAM domain protein
LMJ37_11100	COG0837	glucose binding
LMJ37_11115	COG1643	Atp-dependent helicase
LMJ37_11120	COG0783	Belongs to the Dps family
LMJ37_11125	COG0514	ATP-dependent DNA helicase (RecQ)
LMJ37_11155	COG0840	transmembrane signaling receptor activity
LMJ37_11175	COG3920	Histidine kinase
LMJ37_11180	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
LMJ37_11190	COG0602	queuosine metabolic process
LMJ37_11200	COG2885	chlorophyll binding
LMJ37_11205	COG0823	Involved in the tonB-independent uptake of proteins
LMJ37_11215	COG0848	biopolymer transport protein
LMJ37_11225	COG0824	Thioesterase
LMJ37_11230	COG2255	four-way junction helicase activity
LMJ37_11240	COG3158	transport of potassium into the cell
LMJ37_11245	COG0632	four-way junction helicase activity
LMJ37_11250	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
LMJ37_11255	COG0217	transcriptional regulatory protein
LMJ37_11270	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
LMJ37_11375	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
LMJ37_11395	COG2951	lytic endotransglycosylase activity
LMJ37_11410	COG0477	Major facilitator Superfamily
LMJ37_11450	COG0488	(ABC) transporter
LMJ37_11480	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
LMJ37_11480	COG4651	solute:proton antiporter activity
LMJ37_11505	COG4772	TonB-dependent receptor
LMJ37_11515	COG4264	IucA IucC family
LMJ37_11530	COG0019	diaminopimelate decarboxylase activity
LMJ37_11550	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
LMJ37_11560	COG1492	cobalamin metabolic process
LMJ37_11570	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
LMJ37_11595	COG4206	TonB-dependent receptor
LMJ37_11600	COG0542	response to heat
LMJ37_11605	COG1116	anion transmembrane transporter activity
LMJ37_11610	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LMJ37_11615	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LMJ37_11620	COG0667	Aldo Keto reductase
LMJ37_11625	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LMJ37_11630	COG4771	TonB-dependent receptor
LMJ37_11635	COG2827	Endonuclease containing a URI domain
LMJ37_11675	COG1877	trehalose-phosphatase activity
LMJ37_11695	COG0840	transmembrane signaling receptor activity
LMJ37_11700	COG3011	Protein conserved in bacteria
LMJ37_11715	COG0564	pseudouridine synthase activity
LMJ37_11720	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LMJ37_11730	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LMJ37_11730	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
LMJ37_11745	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
LMJ37_11750	COG0045	succinate-CoA ligase (ADP-forming) activity
LMJ37_11780	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
LMJ37_11785	COG0237	dephospho-CoA kinase activity
LMJ37_11805	COG5002	protein histidine kinase activity
LMJ37_11810	COG0745	RESPONSE REGULATOR receiver
LMJ37_11820	COG0189	ligase activity
LMJ37_11935	COG3657	addiction module killer protein
LMJ37_11965	COG3209	COG3209 Rhs family protein
LMJ37_12010	COG2022	thiamine diphosphate biosynthetic process
LMJ37_12015	COG0220	tRNA (guanine-N7-)-methyltransferase activity
LMJ37_12020	COG0471	metal ion transport
LMJ37_12020	COG3273	potassium ion transport
LMJ37_12090	COG2205	protein histidine kinase activity
LMJ37_12090	COG0784	Response regulator, receiver
LMJ37_12095	COG4943	cyclic-guanylate-specific phosphodiesterase activity
LMJ37_12115	COG5297	Belongs to the glycosyl hydrolase family 6
LMJ37_12125	COG3250	beta-galactosidase activity
LMJ37_12130	COG4948	Mandelate Racemase Muconate Lactonizing
LMJ37_12150	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LMJ37_12160	COG0308	aminopeptidase N
LMJ37_12165	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LMJ37_12175	COG0529	Catalyzes the synthesis of activated sulfate
LMJ37_12175	COG2895	sulfate adenylyltransferase (ATP) activity
LMJ37_12180	COG0175	sulfate reduction
LMJ37_12185	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
LMJ37_12190	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LMJ37_12195	COG0175	sulfate reduction
LMJ37_12215	COG2198	Histidine kinase
LMJ37_12215	COG2205	protein histidine kinase activity
LMJ37_12215	COG0784	Response regulator, receiver
LMJ37_12230	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
LMJ37_12230	COG1648	precorrin-2 dehydrogenase activity
LMJ37_12245	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
LMJ37_12250	COG3588	fructose-bisphosphate aldolase
LMJ37_12255	COG0469	pyruvate kinase activity
LMJ37_12265	COG0126	phosphoglycerate kinase activity
LMJ37_12285	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
LMJ37_12295	COG3047	cAMP biosynthetic process
LMJ37_12300	COG3047	cAMP biosynthetic process
LMJ37_12310	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LMJ37_12310	COG3453	Protein conserved in bacteria
LMJ37_12315	COG0725	ABC transporter, periplasmic molybdate-binding protein
LMJ37_12320	COG4149	molybdate abc transporter
LMJ37_12325	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
LMJ37_12360	COG1376	ErfK ybiS ycfS ynhG family protein
LMJ37_12365	COG0739	heme binding
LMJ37_12375	COG4773	Receptor
LMJ37_12385	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
LMJ37_12390	COG1301	dicarboxylic acid transport
LMJ37_12400	COG2304	oxidoreductase activity
LMJ37_12420	COG0714	Associated with various cellular activities
LMJ37_12450	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
LMJ37_12475	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
LMJ37_12485	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LMJ37_12495	COG0194	GDP metabolic process
LMJ37_12500	COG1561	YicC-like family, N-terminal region
LMJ37_12505	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
LMJ37_12515	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
LMJ37_12520	COG0635	Involved in the biosynthesis of porphyrin-containing compound
LMJ37_12535	COG0006	proline dipeptidase activity
LMJ37_12545	COG0006	proline dipeptidase activity
LMJ37_12550	COG3079	Belongs to the UPF0149 family
LMJ37_12570	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
LMJ37_12580	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
LMJ37_12590	COG2912	Transglutaminase-like superfamily
LMJ37_12595	COG1773	rubredoxin
LMJ37_12600	COG0352	thiamine-phosphate diphosphorylase activity
LMJ37_12610	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
LMJ37_12625	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
LMJ37_12655	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
LMJ37_12660	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LMJ37_12670	COG1028	Short-chain dehydrogenase reductase Sdr
LMJ37_12680	COG0671	phosphoesterase, PA-phosphatase related
LMJ37_12685	COG3781	membrane
LMJ37_12695	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
LMJ37_12700	COG0563	adenylate kinase activity
LMJ37_12715	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
LMJ37_12725	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
LMJ37_12750	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
LMJ37_12760	COG0840	transmembrane signaling receptor activity
LMJ37_12765	COG0405	Gamma-glutamyltransferase
LMJ37_12770	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
LMJ37_12790	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
LMJ37_12795	COG0473	3-isopropylmalate dehydrogenase activity
LMJ37_12800	COG0066	3-isopropylmalate dehydratase activity
LMJ37_12805	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
LMJ37_12825	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
LMJ37_12830	COG1538	Outer membrane efflux protein
LMJ37_12835	COG1519	Transferase
LMJ37_12840	COG1560	Kdo2-lipid A biosynthetic process
LMJ37_12865	COG0280	phosphate acetyltransferase
LMJ37_12865	COG0281	malic enzyme
LMJ37_12870	COG1301	dicarboxylic acid transport
LMJ37_12895	COG0583	DNA-binding transcription factor activity
LMJ37_12900	COG0667	Aldo Keto reductase
LMJ37_12915	COG2197	response regulator
LMJ37_12925	COG0642	Histidine kinase
LMJ37_12940	COG2851	Citrate transporter
LMJ37_12945	COG1028	Short-chain dehydrogenase reductase Sdr
LMJ37_12955	COG2211	Major facilitator Superfamily
LMJ37_12980	COG1162	GTPase activity
LMJ37_13000	COG4773	Receptor
LMJ37_13005	COG0726	polysaccharide deacetylase
LMJ37_13010	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
LMJ37_13025	COG3964	amidohydrolase
LMJ37_13030	COG0402	S-adenosylhomocysteine deaminase activity
LMJ37_13050	COG1307	EDD domain protein, DegV family
LMJ37_13055	COG0242	peptide deformylase activity
LMJ37_13075	COG0457	Tetratricopeptide repeat
LMJ37_13080	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
LMJ37_13085	COG1215	transferase activity, transferring glycosyl groups
LMJ37_13090	COG1215	transferase activity, transferring glycosyl groups
LMJ37_13105	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
LMJ37_13150	COG2188	Transcriptional regulator
LMJ37_13170	COG1450	Type ii and iii secretion system protein
LMJ37_13185	COG3166	PFAM Fimbrial assembly family protein
LMJ37_13190	COG3156	type II secretion system protein K
LMJ37_13195	COG4795	General secretion pathway protein
LMJ37_13200	COG2165	general secretion pathway protein
LMJ37_13205	COG4970	Tfp pilus assembly protein FimT
LMJ37_13210	COG2165	general secretion pathway protein
LMJ37_13215	COG1459	type II secretion system
LMJ37_13220	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LMJ37_13225	COG1404	Belongs to the peptidase S8 family
LMJ37_13230	COG5295	Hep Hag repeat protein
LMJ37_13235	COG1404	Belongs to the peptidase S8 family
LMJ37_13240	COG5295	Hep Hag repeat protein
LMJ37_13245	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
LMJ37_13245	COG0047	phosphoribosylformylglycinamidine synthase activity
LMJ37_13250	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
LMJ37_13255	COG4974	Belongs to the 'phage' integrase family
LMJ37_13270	COG0795	lipopolysaccharide-transporting ATPase activity
LMJ37_13280	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
LMJ37_13295	COG0525	valine-tRNA ligase activity
LMJ37_13325	COG1183	phosphatidylcholine synthase activity
LMJ37_13335	COG0442	prolyl-tRNA aminoacylation
LMJ37_13350	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
LMJ37_13355	COG1127	ABC transporter
LMJ37_13360	COG3218	ABC-type transport auxiliary lipoprotein component
LMJ37_13360	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
LMJ37_13390	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LMJ37_13395	COG0662	Cupin 2, conserved barrel domain protein
LMJ37_13395	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
LMJ37_13425	COG2086	electron transfer activity
LMJ37_13440	COG0463	Glycosyl transferase, family 2
LMJ37_13460	COG2813	Specifically methylates the guanine in position
LMJ37_13475	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
LMJ37_13480	COG0438	transferase activity, transferring glycosyl groups
LMJ37_13500	COG0438	transferase activity, transferring glycosyl groups
LMJ37_13505	COG0626	cystathionine gamma-synthase activity
LMJ37_13535	COG0625	glutathione transferase activity
LMJ37_13545	COG0513	Belongs to the DEAD box helicase family
LMJ37_13555	COG4206	TonB-dependent receptor
LMJ37_13560	COG0720	synthase
LMJ37_13570	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
LMJ37_13575	COG1956	GAF domain-containing protein
LMJ37_13585	COG2819	hydrolase of the alpha beta superfamily
LMJ37_13595	COG0546	phosphoglycolate phosphatase activity
LMJ37_13600	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LMJ37_13605	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
LMJ37_13620	COG0339	signal peptide processing
LMJ37_13675	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
LMJ37_13680	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LMJ37_13685	COG1136	(ABC) transporter
LMJ37_13685	COG4591	ABC-type transport system involved in lipoprotein release permease component
LMJ37_13690	COG0577	efflux transmembrane transporter activity
LMJ37_13710	COG4191	Histidine kinase
LMJ37_13715	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
LMJ37_13730	COG0355	proton-transporting ATP synthase activity, rotational mechanism
LMJ37_13735	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
LMJ37_13740	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
LMJ37_13745	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
LMJ37_13750	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LMJ37_13755	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
LMJ37_13765	COG0356	it plays a direct role in the translocation of protons across the membrane
LMJ37_13785	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LMJ37_13795	COG0508	dehydrogenase complex catalyzes the overall conversion of
LMJ37_13835	COG2011	ABC-type metal ion transport system permease component
LMJ37_13840	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LMJ37_13845	COG0697	spore germination
LMJ37_13850	COG1666	GTP binding
LMJ37_13860	COG0784	Response regulator, receiver
LMJ37_13860	COG2198	Histidine kinase
LMJ37_13860	COG5002	protein histidine kinase activity
LMJ37_13880	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LMJ37_13890	COG2813	Specifically methylates the guanine in position
LMJ37_13910	COG2205	protein histidine kinase activity
LMJ37_13910	COG2202	Pas domain
LMJ37_13930	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LMJ37_13935	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LMJ37_13990	COG0842	Transport permease protein
LMJ37_13995	COG1131	(ABC) transporter
LMJ37_14000	COG0025	NhaP-type Na H and K H
LMJ37_14005	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
LMJ37_14010	COG1573	uracil-dna glycosylase
LMJ37_14020	COG3384	dioxygenase
LMJ37_14030	COG0583	DNA-binding transcription factor activity
LMJ37_14040	COG0667	Aldo Keto reductase
LMJ37_14050	COG3590	peptidase
LMJ37_14070	COG0531	amino acid
LMJ37_14085	COG2972	Histidine kinase
LMJ37_14100	COG3685	Protein conserved in bacteria
LMJ37_14105	COG3546	catalase activity
LMJ37_14150	COG1271	oxidase subunit
LMJ37_14155	COG1294	oxidase, subunit
LMJ37_14170	COG1028	Short-chain dehydrogenase reductase Sdr
LMJ37_14175	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
LMJ37_14195	COG1132	(ABC) transporter
LMJ37_14210	COG1063	alcohol dehydrogenase
LMJ37_14290	COG0251	oxidation-reduction process
LMJ37_14305	COG0840	transmembrane signaling receptor activity
LMJ37_14320	COG0583	DNA-binding transcription factor activity
LMJ37_14325	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
LMJ37_14365	COG0024	Methionine aminopeptidase
LMJ37_14445	COG0582	viral genome integration into host DNA
LMJ37_14480	COG4695	Portal protein
LMJ37_14525	COG3179	chitinase
LMJ37_14725	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
LMJ37_14730	COG1490	D-aminoacyl-tRNA deacylase activity
LMJ37_14735	COG1560	Kdo2-lipid A biosynthetic process
LMJ37_14785	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LMJ37_14785	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LMJ37_14790	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
LMJ37_14795	COG0242	peptide deformylase activity
LMJ37_14800	COG1652	LysM domain
LMJ37_14805	COG0758	DNA mediated transformation
LMJ37_14825	COG1754	DNA topoisomerase type I activity
LMJ37_14825	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LMJ37_14830	COG0009	L-threonylcarbamoyladenylate synthase
LMJ37_14845	COG1028	Short-chain dehydrogenase reductase Sdr
LMJ37_14855	COG0616	signal peptide processing
LMJ37_14860	COG0534	Mate efflux family protein
LMJ37_14880	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LMJ37_14885	COG0625	glutathione transferase activity
LMJ37_14900	COG1252	NADH dehydrogenase
LMJ37_14905	COG2860	membrane
LMJ37_14910	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
LMJ37_14915	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
LMJ37_14920	COG2201	protein-glutamate methylesterase activity
LMJ37_14925	COG2177	Part of the ABC transporter FtsEX involved in
LMJ37_14930	COG2884	Cell division ATP-binding protein ftsE
LMJ37_14940	COG3118	belongs to the thioredoxin family
LMJ37_14945	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
LMJ37_14955	COG0583	DNA-binding transcription factor activity
LMJ37_14975	COG1652	LysM domain
LMJ37_14980	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
LMJ37_14980	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
LMJ37_14985	COG1473	amidohydrolase
LMJ37_14990	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LMJ37_14995	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LMJ37_15005	COG5383	Protein conserved in bacteria
LMJ37_15045	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
LMJ37_15050	COG3023	N-Acetylmuramoyl-L-alanine amidase
LMJ37_15060	COG4948	Mandelate Racemase Muconate Lactonizing
LMJ37_15070	COG0531	amino acid
LMJ37_15085	COG4682	membrane
LMJ37_15100	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
LMJ37_15105	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
LMJ37_15115	COG1610	YqeY-like protein
LMJ37_15120	COG1295	ribonuclease BN
LMJ37_15125	COG0358	DNA primase activity
LMJ37_15140	COG0109	protoheme IX farnesyltransferase activity
LMJ37_15170	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
LMJ37_15185	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
LMJ37_15225	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
LMJ37_15230	COG0739	heme binding
LMJ37_15235	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
LMJ37_15245	COG2211	Major facilitator Superfamily
LMJ37_15250	COG0708	Exodeoxyribonuclease III
LMJ37_15255	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
LMJ37_15265	COG1192	Involved in chromosome partitioning
LMJ37_15270	COG1475	DNA binding
LMJ37_15285	COG0463	Glycosyl transferase, family 2
LMJ37_15305	COG0756	dUTP diphosphatase activity
LMJ37_15310	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
LMJ37_15315	COG2003	Belongs to the UPF0758 family
LMJ37_15320	COG0018	arginyl-trna synthetase
LMJ37_15335	COG4221	oxidoreductase activity
LMJ37_15350	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LMJ37_15350	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LMJ37_15355	COG1166	arginine decarboxylase activity
LMJ37_15360	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
LMJ37_15380	COG3291	Pkd domain containing protein
LMJ37_15380	COG3525	Glycosyl hydrolase, family 20, catalytic domain
LMJ37_15385	COG0347	Belongs to the P(II) protein family
LMJ37_15395	COG0606	chelatase, subunit chli
LMJ37_15410	COG4943	cyclic-guanylate-specific phosphodiesterase activity
LMJ37_15435	COG1690	Belongs to the RtcB family
LMJ37_15475	COG1090	epimerase
LMJ37_15485	COG0642	Histidine kinase
LMJ37_15515	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LMJ37_15540	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LMJ37_15545	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
LMJ37_15560	COG0753	catalase activity
LMJ37_15575	COG2197	response regulator
LMJ37_15580	COG4585	Histidine kinase
LMJ37_15585	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LMJ37_15590	COG1136	(ABC) transporter
LMJ37_15615	COG0697	spore germination
LMJ37_15630	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LMJ37_15635	COG0180	Tryptophanyl-tRNA synthetase
LMJ37_15640	COG3237	CsbD-like
LMJ37_15680	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
LMJ37_15715	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
LMJ37_15720	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
LMJ37_15720	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
LMJ37_15760	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LMJ37_15780	COG1199	ATP-dependent helicase activity
LMJ37_15795	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
LMJ37_15860	COG0625	glutathione transferase activity
LMJ37_15900	COG4555	ABC transporter
LMJ37_15910	COG1476	TRANSCRIPTIONal
LMJ37_15955	COG0543	2 iron, 2 sulfur cluster binding
LMJ37_15955	COG0633	Ferredoxin
LMJ37_15960	COG1131	(ABC) transporter
LMJ37_15965	COG0842	Transport permease protein
LMJ37_15975	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
LMJ37_16010	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LMJ37_16015	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LMJ37_16025	COG0045	succinate-CoA ligase (ADP-forming) activity
LMJ37_16025	COG1042	CoA-binding domain protein
LMJ37_16025	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LMJ37_16030	COG2239	Acts as a magnesium transporter
LMJ37_16045	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
LMJ37_16050	COG3387	PFAM Glycoside hydrolase 15-related
LMJ37_16065	COG3100	YcgL domain-containing protein
LMJ37_16070	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
LMJ37_16080	COG0463	Glycosyl transferase, family 2
LMJ37_16090	COG1028	Short-chain dehydrogenase reductase Sdr
LMJ37_16140	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LMJ37_16165	COG1506	peptidase
LMJ37_16165	COG4946	Tricorn protease homolog
LMJ37_16165	COG0823	Involved in the tonB-independent uptake of proteins
LMJ37_16180	COG0408	coproporphyrinogen oxidase activity
LMJ37_16215	COG0515	serine threonine protein kinase
LMJ37_16215	COG2815	serine threonine protein kinase
LMJ37_16220	COG0631	protein serine/threonine phosphatase activity
LMJ37_16430	COG0210	DNA helicase
LMJ37_16440	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LMJ37_16445	COG0583	DNA-binding transcription factor activity
LMJ37_16450	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
LMJ37_16460	COG2159	amidohydrolase
LMJ37_16485	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LMJ37_16505	COG0357	Ribosomal RNA small subunit methyltransferase G
LMJ37_16510	COG3540	Alkaline phosphatase
LMJ37_16520	COG2091	lysine biosynthetic process via aminoadipic acid
LMJ37_16535	COG0708	Exodeoxyribonuclease III
LMJ37_16540	COG1846	Transcriptional regulator
LMJ37_16540	COG1940	carbohydrate kinase activity
LMJ37_16550	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LMJ37_16560	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LMJ37_16565	COG3162	membrane
LMJ37_16575	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
LMJ37_16600	COG3507	Belongs to the glycosyl hydrolase 43 family
LMJ37_16620	COG1028	Short-chain dehydrogenase reductase Sdr
LMJ37_16625	COG0179	Fumarylacetoacetate (FAA) hydrolase
LMJ37_16630	COG4948	Mandelate Racemase Muconate Lactonizing
LMJ37_16635	COG3254	rhamnose metabolic process
LMJ37_16640	COG0738	Major facilitator superfamily
LMJ37_16645	COG1414	Transcriptional regulator
LMJ37_16650	COG1971	Probably functions as a manganese efflux pump
LMJ37_16655	COG2205	protein histidine kinase activity
LMJ37_16665	COG3459	Glycosyltransferase 36 associated
LMJ37_16670	COG2211	Major facilitator Superfamily
LMJ37_16675	COG3265	gluconokinase activity
LMJ37_16680	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LMJ37_16700	COG2911	Protein conserved in bacteria
LMJ37_16705	COG0729	surface antigen
LMJ37_16745	COG0752	glycyl-tRNA synthetase alpha subunit
LMJ37_16750	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LMJ37_16765	COG0519	Catalyzes the synthesis of GMP from XMP
LMJ37_16765	COG0518	GMP synthase (glutamine-hydrolyzing) activity
LMJ37_16775	COG0805	protein transport
LMJ37_16780	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
LMJ37_16785	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
LMJ37_16795	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
LMJ37_16810	COG2974	May be involved in recombination
LMJ37_16815	COG0037	tRNA processing
LMJ37_16820	COG2115	Belongs to the xylose isomerase family
LMJ37_16830	COG3661	Belongs to the glycosyl hydrolase 67 family
LMJ37_16840	COG4948	Mandelate Racemase Muconate Lactonizing
LMJ37_16850	COG1472	Belongs to the glycosyl hydrolase 3 family
LMJ37_16855	COG0246	Mannitol dehydrogenase
LMJ37_16900	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
LMJ37_16930	COG3386	PFAM SMP-30 Gluconolaconase
LMJ37_16940	COG3250	beta-galactosidase activity
LMJ37_16945	COG1904	glucuronate isomerase
LMJ37_16950	COG3693	PFAM glycoside hydrolase, family 10
LMJ37_16965	COG3693	PFAM glycoside hydrolase, family 10
LMJ37_16980	COG2211	Major facilitator Superfamily
LMJ37_17020	COG2937	Belongs to the GPAT DAPAT family
LMJ37_17050	COG0284	orotidine-5'-phosphate decarboxylase activity
LMJ37_17055	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
LMJ37_17060	COG3132	Protein of unknown function, DUF480
LMJ37_17075	COG0210	DNA helicase
LMJ37_17080	COG1435	thymidine kinase activity
LMJ37_17090	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
LMJ37_17100	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
LMJ37_17130	COG3135	benzoate transporter
LMJ37_17150	COG0676	glucose-6-phosphate 1-epimerase activity
LMJ37_17160	COG3012	SEC-C Motif Domain Protein
LMJ37_17165	COG0730	response to heat
LMJ37_17190	COG0302	gtp cyclohydrolase
LMJ37_17205	COG1566	PFAM secretion protein HlyD family protein
LMJ37_17215	COG1289	transmembrane transporter activity
LMJ37_17220	COG0477	Major facilitator Superfamily
LMJ37_17230	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LMJ37_17250	COG4691	Plasmid stability protein
LMJ37_17255	COG1487	ribonuclease activity
LMJ37_17290	COG0564	pseudouridine synthase activity
LMJ37_17300	COG0439	Biotin carboxylase
LMJ37_17340	COG1074	ATP-dependent DNA helicase activity
LMJ37_17345	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
LMJ37_17360	COG1127	ABC transporter
LMJ37_17365	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
LMJ37_17370	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
LMJ37_17385	COG2853	Lipoprotein
LMJ37_17395	COG0386	Belongs to the glutathione peroxidase family
LMJ37_17405	COG1322	Protein conserved in bacteria
LMJ37_17410	COG0604	alcohol dehydrogenase
LMJ37_17415	COG0583	DNA-binding transcription factor activity
LMJ37_17425	COG0625	glutathione transferase activity
LMJ37_17435	COG0531	amino acid
LMJ37_17440	COG3537	Alpha-1,2-mannosidase
LMJ37_17450	COG3706	GGDEF domain
LMJ37_17455	COG3835	regulator
LMJ37_17460	COG1929	Belongs to the glycerate kinase type-1 family
LMJ37_17465	COG2271	Major facilitator Superfamily
LMJ37_17480	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
LMJ37_17485	COG0861	Integral membrane protein TerC family
LMJ37_17495	COG0584	glycerophosphoryl diester phosphodiesterase
LMJ37_17510	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
LMJ37_17515	COG0726	polysaccharide deacetylase
LMJ37_17520	COG0706	membrane insertase activity
LMJ37_17525	COG0594	ribonuclease P activity
LMJ37_17535	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
LMJ37_17545	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
LMJ37_17550	COG0187	DNA topoisomerase II activity
LMJ37_17560	COG0501	Belongs to the peptidase M48B family
LMJ37_17590	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
LMJ37_17600	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LMJ37_17645	COG0793	Belongs to the peptidase S41A family
LMJ37_17650	COG4942	peptidase
LMJ37_17660	COG2234	aminopeptidase activity
LMJ37_17670	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
LMJ37_17680	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
LMJ37_17690	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
LMJ37_17695	COG1064	alcohol dehydrogenase
LMJ37_17700	COG0493	'glutamate synthase
LMJ37_17705	COG0069	glutamate synthase activity
LMJ37_17705	COG0067	glutamate synthase
LMJ37_17705	COG0070	glutamate synthase
LMJ37_17730	COG2366	antibiotic biosynthetic process
LMJ37_17760	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
LMJ37_17775	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
LMJ37_17780	COG0297	glycogen (starch) synthase activity
LMJ37_17780	COG0438	transferase activity, transferring glycosyl groups
LMJ37_17800	COG0367	asparagine synthase
LMJ37_17830	COG1132	(ABC) transporter
LMJ37_17860	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
LMJ37_17945	COG1111	helicase
LMJ37_17945	COG1205	dead DEAH box helicase
LMJ37_17950	COG1272	protein, Hemolysin III
LMJ37_17975	COG1028	Short-chain dehydrogenase reductase Sdr
LMJ37_17995	COG2249	NAD(P)H dehydrogenase (quinone) activity
LMJ37_18000	COG3237	CsbD-like
LMJ37_18045	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LMJ37_18050	COG0477	Major facilitator Superfamily
LMJ37_18090	COG0714	Associated with various cellular activities
LMJ37_18120	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
LMJ37_18130	COG4772	TonB-dependent receptor
LMJ37_18140	COG0662	Cupin 2, conserved barrel domain protein
LMJ37_18145	COG1012	belongs to the aldehyde dehydrogenase family
LMJ37_18170	COG1304	FMN binding
LMJ37_18180	COG4585	Histidine kinase
LMJ37_18185	COG2197	response regulator
LMJ37_18205	COG3710	Transcriptional regulator
LMJ37_18210	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
LMJ37_18245	COG2131	deaminase
LMJ37_18295	COG0366	Alpha amylase catalytic
LMJ37_18300	COG0366	Alpha amylase catalytic
LMJ37_18305	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
LMJ37_18325	COG0657	acetylesterase activity
LMJ37_18325	COG2755	lipolytic protein G-D-S-L family
LMJ37_18335	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
LMJ37_18350	COG3507	Belongs to the glycosyl hydrolase 43 family
LMJ37_18355	COG1609	Transcriptional regulator
LMJ37_18360	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
LMJ37_18365	COG1028	Short-chain dehydrogenase reductase Sdr
LMJ37_18375	COG2755	lipolytic protein G-D-S-L family
LMJ37_18390	COG3186	Phenylalanine-4-hydroxylase
LMJ37_18395	COG1522	sequence-specific DNA binding
LMJ37_18405	COG1752	Esterase of the alpha-beta hydrolase superfamily
LMJ37_18415	COG1119	ATPase activity
LMJ37_18430	COG1125	glycine betaine transport
LMJ37_18445	COG1262	PFAM Formylglycine-generating sulfatase enzyme
LMJ37_18465	COG3550	peptidyl-serine autophosphorylation
LMJ37_18470	COG1396	sequence-specific DNA binding
LMJ37_18490	COG0489	protein tyrosine kinase activity
LMJ37_18495	COG2062	phosphohistidine phosphatase, SixA
LMJ37_18505	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LMJ37_18550	COG1968	undecaprenyl-diphosphatase activity
LMJ37_18555	COG0174	glutamine synthetase
LMJ37_18560	COG0347	Belongs to the P(II) protein family
LMJ37_18565	COG0004	ammonium transporteR
LMJ37_18570	COG3852	Histidine kinase
LMJ37_18575	COG2204	response regulator
LMJ37_18580	COG2032	superoxide dismutase activity
LMJ37_18585	COG2032	superoxide dismutase activity
LMJ37_18595	COG0346	lactoylglutathione lyase activity
LMJ37_18605	COG0183	Belongs to the thiolase family
LMJ37_18640	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LMJ37_18645	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
LMJ37_18650	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
LMJ37_18710	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
LMJ37_18715	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
LMJ37_18720	COG4786	Flagellar basal body rod
LMJ37_18725	COG4786	Flagellar basal body rod
LMJ37_18735	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
LMJ37_18740	COG1706	bacterial-type flagellum-dependent cell motility
LMJ37_18755	COG1677	Flagellar hook-basal body complex protein FliE
LMJ37_18775	COG1157	protein secretion by the type III secretion system
LMJ37_18790	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
LMJ37_18825	COG0028	Belongs to the TPP enzyme family
LMJ37_18830	COG2205	protein histidine kinase activity
LMJ37_18855	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
LMJ37_18870	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LMJ37_18880	COG0596	Alpha beta hydrolase
LMJ37_18885	COG0727	PFAM Uncharacterised protein family (UPF0153)
LMJ37_18890	COG0318	PFAM AMP-dependent synthetase and ligase
LMJ37_18895	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LMJ37_18910	COG1181	Belongs to the D-alanine--D-alanine ligase family
LMJ37_18920	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
LMJ37_18930	COG0564	pseudouridine synthase activity
LMJ37_18950	COG1446	asparaginase
LMJ37_18955	COG0339	signal peptide processing
LMJ37_18990	COG0475	glutathione-regulated potassium exporter activity
LMJ37_18995	COG0583	DNA-binding transcription factor activity
LMJ37_19000	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
LMJ37_19010	COG2224	Isocitrate lyase
LMJ37_19040	COG4770	biotin carboxylase activity
LMJ37_19045	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
LMJ37_19050	COG1960	acyl-CoA dehydrogenase activity
LMJ37_19105	COG0523	cobalamin synthesis protein
LMJ37_19115	COG0697	spore germination
LMJ37_19125	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
LMJ37_19130	COG1846	Transcriptional regulator
LMJ37_19135	COG1764	response to oxidative stress
LMJ37_19160	COG2130	NADP-dependent
LMJ37_19175	COG1187	pseudouridine synthase activity
LMJ37_19190	COG1643	Atp-dependent helicase
LMJ37_19195	COG4807	Protein conserved in bacteria
LMJ37_19200	COG2351	hydroxyisourate hydrolase activity
LMJ37_19205	COG2072	flavoprotein involved in K transport
LMJ37_19225	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
LMJ37_19260	COG1957	nucleoside hydrolase
LMJ37_19270	COG2252	PERMEase
LMJ37_19290	COG0084	hydrolase, TatD family'
LMJ37_19305	COG0583	DNA-binding transcription factor activity
LMJ37_19310	COG2814	Major facilitator Superfamily
LMJ37_19325	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
LMJ37_19330	COG1902	pentaerythritol trinitrate reductase activity
LMJ37_19350	COG0745	RESPONSE REGULATOR receiver
LMJ37_19355	COG2205	protein histidine kinase activity
LMJ37_19360	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LMJ37_19385	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
LMJ37_19390	COG0583	DNA-binding transcription factor activity
LMJ37_19420	COG0702	epimerase
LMJ37_19425	COG1733	regulation of RNA biosynthetic process
LMJ37_19460	COG0129	dihydroxy-acid dehydratase activity
LMJ37_19475	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
LMJ37_19530	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
LMJ37_19535	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
LMJ37_19560	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
LMJ37_19565	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
LMJ37_19575	COG3485	protocatechuate 3,4-dioxygenase
LMJ37_19580	COG3485	protocatechuate 3,4-dioxygenase
LMJ37_19590	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
LMJ37_19595	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
LMJ37_19605	COG1414	Transcriptional regulator
LMJ37_19615	COG0657	acetylesterase activity
LMJ37_19625	COG0445	tRNA wobble uridine modification
LMJ37_19635	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
LMJ37_19665	COG2267	carboxylic ester hydrolase activity
LMJ37_19675	COG0156	8-amino-7-oxononanoate synthase activity
LMJ37_19680	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
LMJ37_19685	COG1040	competence protein
LMJ37_19690	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
LMJ37_19770	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
LMJ37_19855	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
LMJ37_19860	COG2354	Protein conserved in bacteria
LMJ37_19870	COG0297	glycogen (starch) synthase activity
LMJ37_19875	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
LMJ37_19880	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
LMJ37_19905	COG0702	epimerase
LMJ37_19910	COG1028	Short-chain dehydrogenase reductase Sdr
LMJ37_19930	COG0513	Belongs to the DEAD box helicase family
LMJ37_19935	COG0508	dehydrogenase complex catalyzes the overall conversion of
LMJ37_19950	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
LMJ37_19960	COG3483	tryptophan 2,3-dioxygenase activity
LMJ37_19965	COG3104	oligopeptide transport
LMJ37_19985	COG2852	Protein conserved in bacteria
LMJ37_19990	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
LMJ37_20010	COG1320	monovalent cation:proton antiporter activity
LMJ37_20015	COG2212	antiporter activity
LMJ37_20025	COG0651	ATP synthesis coupled electron transport
LMJ37_20030	COG1006	Multisubunit Na H antiporter MnhC subunit
LMJ37_20035	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
LMJ37_20035	COG2111	Na H antiporter
LMJ37_20055	COG3179	chitinase
LMJ37_20075	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
LMJ37_20080	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
LMJ37_20095	COG0456	acetyltransferase
LMJ37_20100	COG1597	lipid kinase activity
LMJ37_20125	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
LMJ37_20130	COG0134	indole-3-glycerol-phosphate synthase activity
LMJ37_20140	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LMJ37_20145	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
LMJ37_20155	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
LMJ37_20165	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LMJ37_20180	COG1051	belongs to the nudix hydrolase family
LMJ37_20220	COG0316	Belongs to the HesB IscA family
LMJ37_20235	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
LMJ37_20250	COG2814	Major facilitator Superfamily
LMJ37_20260	COG2814	Major facilitator Superfamily
LMJ37_20265	COG1289	transmembrane transporter activity
LMJ37_20275	COG0151	Belongs to the GarS family
LMJ37_20285	COG0138	bifunctional purine biosynthesis protein purh
LMJ37_20290	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LMJ37_20295	COG2267	carboxylic ester hydrolase activity
LMJ37_20300	COG2453	phosphatase
LMJ37_20300	COG0671	phosphoesterase, PA-phosphatase related
LMJ37_20325	COG4589	Belongs to the CDS family
LMJ37_20330	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
LMJ37_20350	COG2264	protein methyltransferase activity
LMJ37_20365	COG0439	Biotin carboxylase
LMJ37_20375	COG0511	ligase activity, forming carbon-carbon bonds
LMJ37_20380	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
LMJ37_20390	COG1324	tolerance protein
LMJ37_20410	COG0300	oxidoreductase activity
LMJ37_20415	COG2356	endonuclease I
LMJ37_20430	COG0459	protein refolding
LMJ37_20445	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LMJ37_20460	COG3386	PFAM SMP-30 Gluconolaconase
LMJ37_20470	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
LMJ37_20475	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
LMJ37_20490	COG0778	Nitroreductase
LMJ37_20495	COG2353	YceI-like domain
LMJ37_20525	COG3052	prosthetic group binding
LMJ37_20560	COG1802	Transcriptional regulator
LMJ37_20670	COG4221	oxidoreductase activity
LMJ37_20685	COG4221	oxidoreductase activity
LMJ37_20695	COG0435	Glutathione S-transferase
LMJ37_20715	COG2409	Drug exporters of the RND superfamily
LMJ37_20720	COG0823	Involved in the tonB-independent uptake of proteins
LMJ37_20720	COG1506	peptidase
LMJ37_20760	COG0697	spore germination
LMJ37_20775	COG1113	amino acid transport
LMJ37_20795	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
LMJ37_20830	COG5001	Diguanylate cyclase
LMJ37_20835	COG0840	transmembrane signaling receptor activity
LMJ37_20840	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
LMJ37_20840	COG5297	Belongs to the glycosyl hydrolase family 6
LMJ37_20845	COG0659	secondary active sulfate transmembrane transporter activity
LMJ37_20860	COG2943	transferase activity, transferring hexosyl groups
LMJ37_20870	COG3275	phosphorelay sensor kinase activity
LMJ37_20880	COG0181	hydroxymethylbilane synthase activity
LMJ37_20905	COG1505	serine-type exopeptidase activity
LMJ37_20915	COG0436	Aminotransferase
LMJ37_20925	COG2832	Protein of unknown function (DUF454)
LMJ37_20935	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
LMJ37_20945	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
LMJ37_20950	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
LMJ37_20955	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
LMJ37_20980	COG2226	methyltransferase
LMJ37_20985	COG3300	MHYT domain
LMJ37_20985	COG5001	Diguanylate cyclase
LMJ37_20990	COG0308	aminopeptidase N
LMJ37_21035	COG3284	Transcriptional regulator
LMJ37_21040	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LMJ37_21045	COG1077	Cell shape determining protein MreB Mrl
LMJ37_21050	COG1792	Involved in formation and maintenance of cell shape
LMJ37_21065	COG0772	Belongs to the SEDS family
LMJ37_21075	COG2951	lytic endotransglycosylase activity
LMJ37_21080	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
LMJ37_21085	COG1686	Belongs to the peptidase S11 family
LMJ37_21095	COG2921	Belongs to the UPF0250 family
LMJ37_21100	COG0321	lipoyl(octanoyl) transferase activity
LMJ37_21105	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
LMJ37_21120	COG0583	DNA-binding transcription factor activity
LMJ37_21130	COG1051	belongs to the nudix hydrolase family
LMJ37_21130	COG1056	cytidyltransferase-related domain
LMJ37_21165	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
LMJ37_21170	COG0673	inositol 2-dehydrogenase activity
LMJ37_21175	COG2823	Periplasmic or secreted lipoprotein
LMJ37_21180	COG4251	negative regulation of phosphorylation
LMJ37_21185	COG0784	Response regulator, receiver
LMJ37_21190	COG4191	Histidine kinase
LMJ37_21195	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
LMJ37_21250	COG1459	type II secretion system
LMJ37_21270	COG4795	General secretion pathway protein
LMJ37_21300	COG3250	beta-galactosidase activity
LMJ37_21315	COG2188	Transcriptional regulator
LMJ37_21325	COG1609	Transcriptional regulator
LMJ37_21330	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
LMJ37_21335	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
LMJ37_21345	COG0617	tRNA 3'-terminal CCA addition
LMJ37_21350	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
LMJ37_21355	COG1012	belongs to the aldehyde dehydrogenase family
LMJ37_21360	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
LMJ37_21375	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
LMJ37_21390	COG0218	Necessary for normal cell division and for the maintenance of normal septation
LMJ37_21395	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
LMJ37_21410	COG2205	protein histidine kinase activity
LMJ37_21440	COG3791	Glutathione-dependent formaldehyde-activating
LMJ37_21450	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LMJ37_21470	COG0488	(ABC) transporter
LMJ37_21480	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
LMJ37_21485	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
LMJ37_21495	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LMJ37_21495	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LMJ37_21515	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
LMJ37_21520	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LMJ37_21525	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
LMJ37_21545	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
LMJ37_21550	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
LMJ37_21555	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
LMJ37_21560	COG2205	protein histidine kinase activity
LMJ37_21565	COG0745	RESPONSE REGULATOR receiver
LMJ37_21580	COG0277	FAD linked oxidase domain protein
LMJ37_21585	COG1988	membrane-bound metal-dependent
LMJ37_21590	COG0792	nuclease activity
LMJ37_21635	COG0275	rRNA processing
LMJ37_21640	COG3116	cell division
LMJ37_21650	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LMJ37_21655	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
LMJ37_21660	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LMJ37_21670	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
LMJ37_21675	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
LMJ37_21680	COG1181	Belongs to the D-alanine--D-alanine ligase family
LMJ37_21685	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
LMJ37_21700	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
LMJ37_21710	COG0739	heme binding
LMJ37_21715	COG0653	protein targeting
LMJ37_21720	COG0494	nUDIX hydrolase
LMJ37_21730	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
LMJ37_21740	COG0604	alcohol dehydrogenase
LMJ37_21740	COG1028	Short-chain dehydrogenase reductase Sdr
LMJ37_21740	COG3321	synthase
LMJ37_21760	COG0366	Alpha amylase catalytic
LMJ37_21790	COG2226	methyltransferase
LMJ37_21795	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
LMJ37_21805	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
LMJ37_21845	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
LMJ37_21855	COG4106	trans-aconitate 2-methyltransferase activity
LMJ37_21860	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LMJ37_21870	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LMJ37_21875	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LMJ37_21880	COG0667	Aldo Keto reductase
LMJ37_21890	COG4771	TonB-dependent receptor
LMJ37_21910	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LMJ37_21915	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
LMJ37_21925	COG2175	clavaminate synthase activity
LMJ37_21935	COG4181	ATPase activity
LMJ37_21950	COG0642	Histidine kinase
LMJ37_21960	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
LMJ37_21980	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
LMJ37_21985	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
LMJ37_22000	COG3829	transcription factor binding
LMJ37_22010	COG1116	anion transmembrane transporter activity
LMJ37_22015	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LMJ37_22025	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LMJ37_22030	COG0431	NADPH-dependent FMN reductase
LMJ37_22060	COG0747	negative chemotaxis
LMJ37_22070	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LMJ37_22080	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
LMJ37_22085	COG2967	ApaG domain
LMJ37_22090	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
LMJ37_22095	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
LMJ37_22100	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LMJ37_22105	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
LMJ37_22110	COG0123	including yeast histone deacetylase and acetoin utilization protein
LMJ37_22115	COG2096	Adenosyltransferase
LMJ37_22130	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LMJ37_22135	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LMJ37_22165	COG3384	dioxygenase
LMJ37_22170	COG0583	DNA-binding transcription factor activity
LMJ37_22185	COG1024	Enoyl-CoA hydratase
LMJ37_22205	COG3386	PFAM SMP-30 Gluconolaconase
LMJ37_22220	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
LMJ37_22240	COG0697	spore germination
LMJ37_22250	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LMJ37_22275	COG2197	response regulator
LMJ37_22285	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LMJ37_22295	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
LMJ37_22300	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
LMJ37_22305	COG0583	DNA-binding transcription factor activity
LMJ37_22310	COG3634	alkyl hydroperoxide reductase activity
LMJ37_22320	COG2890	protein-(glutamine-N5) methyltransferase activity
LMJ37_22340	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LMJ37_22340	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LMJ37_22370	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
LMJ37_22395	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
LMJ37_22410	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
LMJ37_22415	COG1404	Belongs to the peptidase S8 family
LMJ37_22420	COG1404	Belongs to the peptidase S8 family
LMJ37_22425	COG1404	Belongs to the peptidase S8 family
LMJ37_22430	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
LMJ37_22455	COG1295	ribonuclease BN
LMJ37_22460	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LMJ37_22465	COG1254	Belongs to the acylphosphatase family
LMJ37_22480	COG0521	Mo-molybdopterin cofactor biosynthetic process
LMJ37_22490	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
LMJ37_22495	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
LMJ37_22505	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
LMJ37_22510	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
LMJ37_22520	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LMJ37_22525	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
LMJ37_22530	COG0193	aminoacyl-tRNA hydrolase activity
LMJ37_22535	COG0012	GTP binding
LMJ37_22555	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
LMJ37_22570	COG0250	Participates in transcription elongation, termination and antitermination
LMJ37_22575	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
LMJ37_22580	COG0081	regulation of translation
LMJ37_22585	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
LMJ37_22590	COG0222	ribosome binding
LMJ37_22595	COG0085	RNA polymerase activity
LMJ37_22600	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LMJ37_22605	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
LMJ37_22610	COG0049	tRNA binding
LMJ37_22615	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
LMJ37_22620	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
LMJ37_22625	COG0051	transcription antitermination factor activity, RNA binding
LMJ37_22630	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
LMJ37_22635	COG0088	Forms part of the polypeptide exit tunnel
LMJ37_22640	COG0089	rRNA binding
LMJ37_22645	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
LMJ37_22650	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
LMJ37_22660	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
LMJ37_22665	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
LMJ37_22670	COG0255	Belongs to the universal ribosomal protein uL29 family
LMJ37_22675	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
LMJ37_22685	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
LMJ37_22690	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
LMJ37_22700	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
LMJ37_22705	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
LMJ37_22710	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
LMJ37_22720	COG1841	ribosomal large subunit assembly
LMJ37_22725	COG0200	Binds to the 23S rRNA
LMJ37_22730	COG0201	protein transport
LMJ37_22755	COG0203	ribosomal protein L17
LMJ37_22760	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
LMJ37_22775	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
LMJ37_22785	COG0154	amidase activity
LMJ37_22795	COG1217	gtp-binding protein TYPA
LMJ37_22800	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LMJ37_22805	COG0039	L-malate dehydrogenase activity
LMJ37_22810	COG0625	glutathione transferase activity
LMJ37_22820	COG1902	pentaerythritol trinitrate reductase activity
LMJ37_22820	COG0446	pyridine nucleotide-disulphide oxidoreductase
LMJ37_22825	COG0604	alcohol dehydrogenase
LMJ37_22855	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
LMJ37_22870	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
LMJ37_22880	COG1063	alcohol dehydrogenase
LMJ37_22910	COG0406	alpha-ribazole phosphatase activity
LMJ37_22935	COG2833	Protein of unknown function (DUF455)
LMJ37_22955	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LMJ37_22960	COG0671	phosphoesterase, PA-phosphatase related
LMJ37_22975	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
LMJ37_22990	COG4783	chaperone-mediated protein folding
LMJ37_23005	COG0473	3-isopropylmalate dehydrogenase activity
LMJ37_23040	COG3852	Histidine kinase
LMJ37_23055	COG0544	peptidyl-prolyl cis-trans isomerase activity
LMJ37_23065	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
LMJ37_23095	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LMJ37_23105	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LMJ37_23120	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
LMJ37_23140	COG0859	PFAM glycosyl transferase family 9
LMJ37_23155	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
LMJ37_23170	COG0315	cyclic pyranopterin monophosphate synthase activity
LMJ37_23175	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
LMJ37_23180	COG0314	molybdopterin synthase activity
LMJ37_23205	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
LMJ37_23210	COG0537	adenosine 5'-monophosphoramidase activity
LMJ37_23230	COG0714	Associated with various cellular activities
LMJ37_23415	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
LMJ37_23425	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain