locus-tag class description CIW71_00005 PF00308 Bacterial dnaA protein CIW71_00005 PF08299 Bacterial dnaA protein helix-turn-helix CIW71_00005 PF11638 DnaA N-terminal domain CIW71_00010 PF02767 DNA polymerase III beta subunit, central domain CIW71_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CIW71_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CIW71_00015 PF02463 RecF/RecN/SMC N terminal domain CIW71_00020 PF00204 DNA gyrase B CIW71_00020 PF00986 DNA gyrase B subunit, carboxyl terminus CIW71_00020 PF18053 DNA gyrase B subunit insert domain CIW71_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_00020 PF01751 Toprim domain CIW71_00030 PF01435 Peptidase family M48 CIW71_00040 PF03544 Gram-negative bacterial TonB protein C-terminal CIW71_00045 PF01618 MotA/TolQ/ExbB proton channel family CIW71_00050 PF02472 Biopolymer transport protein ExbD/TolR CIW71_00055 PF02472 Biopolymer transport protein ExbD/TolR CIW71_00060 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CIW71_00070 PF13396 Phospholipase_D-nuclease N-terminal CIW71_00070 PF13091 PLD-like domain CIW71_00105 PF04002 RadC-like JAB domain CIW71_00140 PF01695 IstB-like ATP binding protein CIW71_00145 PF02796 Helix-turn-helix domain of resolvase CIW71_00145 PF00665 Integrase core domain CIW71_00195 PF13180 PDZ domain CIW71_00195 PF03572 Peptidase family S41 CIW71_00200 PF01551 Peptidase family M23 CIW71_00210 PF04389 Peptidase family M28 CIW71_00220 PF00150 Cellulase (glycosyl hydrolase family 5) CIW71_00230 PF00150 Cellulase (glycosyl hydrolase family 5) CIW71_00240 PF00150 Cellulase (glycosyl hydrolase family 5) CIW71_00250 PF00107 Zinc-binding dehydrogenase CIW71_00250 PF08240 Alcohol dehydrogenase GroES-like domain CIW71_00255 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CIW71_00255 PF07992 Pyridine nucleotide-disulphide oxidoreductase CIW71_00260 PF04898 Glutamate synthase central domain CIW71_00260 PF01645 Conserved region in glutamate synthase CIW71_00260 PF00310 Glutamine amidotransferases class-II CIW71_00260 PF01493 GXGXG motif CIW71_00310 PF02397 Bacterial sugar transferase CIW71_00315 PF02350 UDP-N-acetylglucosamine 2-epimerase CIW71_00325 PF03808 Glycosyl transferase WecB/TagA/CpsF family CIW71_00330 PF13439 Glycosyltransferase Family 4 CIW71_00330 PF00534 Glycosyl transferases group 1 CIW71_00350 PF13537 Glutamine amidotransferase domain CIW71_00350 PF00733 Asparagine synthase CIW71_00365 PF16363 GDP-mannose 4,6 dehydratase CIW71_00380 PF00664 ABC transporter transmembrane region CIW71_00380 PF00005 ABC transporter CIW71_00395 PF13537 Glutamine amidotransferase domain CIW71_00395 PF00733 Asparagine synthase CIW71_00410 PF07475 HPr Serine kinase C-terminal domain CIW71_00410 PF02603 HPr Serine kinase N terminus CIW71_00415 PF00685 Sulfotransferase domain CIW71_00505 PF00271 Helicase conserved C-terminal domain CIW71_00505 PF00270 DEAD/DEAH box helicase CIW71_00505 PF09369 Domain of unknown function (DUF1998) CIW71_00510 PF03006 Haemolysin-III related CIW71_00530 PF00106 short chain dehydrogenase CIW71_00540 PF03466 LysR substrate binding domain CIW71_00540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW71_00560 PF05598 Transposase domain (DUF772) CIW71_00580 PF00294 pfkB family carbohydrate kinase CIW71_00590 PF07055 Enoyl reductase FAD binding domain CIW71_00590 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase CIW71_00590 PF12241 Trans-2-enoyl-CoA reductase catalytic region CIW71_00595 PF18500 CadC C-terminal domain 1 CIW71_00595 PF00486 Transcriptional regulatory protein, C terminal CIW71_00615 PF00072 Response regulator receiver domain CIW71_00615 PF00196 Bacterial regulatory proteins, luxR family CIW71_00620 PF07730 Histidine kinase CIW71_00625 PF00144 Beta-lactamase CIW71_00635 PF01070 FMN-dependent dehydrogenase CIW71_00640 PF02735 Ku70/Ku80 beta-barrel domain CIW71_00690 PF07883 Cupin domain CIW71_00700 PF00593 TonB dependent receptor CIW71_00700 PF07715 TonB-dependent Receptor Plug Domain CIW71_00705 PF00155 Aminotransferase class I and II CIW71_00710 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CIW71_00740 PF17863 AAA lid domain CIW71_00740 PF07726 ATPase family associated with various cellular activities (AAA) CIW71_00790 PF00085 Thioredoxin CIW71_00810 PF13344 Haloacid dehalogenase-like hydrolase CIW71_00810 PF00293 NUDIX domain CIW71_00835 PF00128 Alpha amylase, catalytic domain CIW71_00835 PF11896 Domain of unknown function (DUF3416) CIW71_00840 PF16657 Maltogenic Amylase, C-terminal domain CIW71_00840 PF00128 Alpha amylase, catalytic domain CIW71_00845 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CIW71_00845 PF00128 Alpha amylase, catalytic domain CIW71_00845 PF02806 Alpha amylase, C-terminal all-beta domain CIW71_00860 PF03377 TAL effector repeat CIW71_00870 PF03377 TAL effector repeat CIW71_00940 PF03524 Conjugal transfer protein CIW71_00945 PF03743 Bacterial conjugation TrbI-like protein CIW71_00950 PF00437 Type II/IV secretion system protein CIW71_00955 PF01464 Transglycosylase SLT domain CIW71_00980 PF07057 DNA helicase TraI CIW71_00980 PF08751 TrwC relaxase CIW71_00980 PF18272 single-stranded DNA binding TraI N-terminal subdomain CIW71_00980 PF18272 single-stranded DNA binding TraI N-terminal subdomain CIW71_00980 PF08751 TrwC relaxase CIW71_00980 PF07057 DNA helicase TraI CIW71_00980 PF18340 DNA relaxase TraI 2B/2B-like domain CIW71_00980 PF18340 DNA relaxase TraI 2B/2B-like domain CIW71_01010 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ CIW71_01015 PF04221 RelB antitoxin CIW71_01045 PF13614 AAA domain CIW71_01050 PF03377 TAL effector repeat CIW71_01080 PF01011 PQQ enzyme repeat CIW71_01080 PF13360 PQQ-like domain CIW71_01080 PF13570 PQQ-like domain CIW71_01100 PF06165 Glycosyltransferase family 36 CIW71_01100 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain CIW71_01115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_01115 PF00512 His Kinase A (phospho-acceptor) domain CIW71_01120 PF02659 Putative manganese efflux pump CIW71_01130 PF09339 IclR helix-turn-helix domain CIW71_01130 PF01614 Bacterial transcriptional regulator CIW71_01135 PF07690 Major Facilitator Superfamily CIW71_01140 PF05336 L-rhamnose mutarotase CIW71_01145 PF13378 Enolase C-terminal domain-like CIW71_01145 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CIW71_01155 PF01557 Fumarylacetoacetate (FAA) hydrolase family CIW71_01170 PF00248 Aldo/keto reductase family CIW71_01205 PF00072 Response regulator receiver domain CIW71_01205 PF00196 Bacterial regulatory proteins, luxR family CIW71_01210 PF16177 Acetyl-coenzyme A synthetase N-terminus CIW71_01210 PF13193 AMP-binding enzyme C-terminal domain CIW71_01210 PF00501 AMP-binding enzyme CIW71_01220 PF04341 Protein of unknown function, DUF485 CIW71_01225 PF00474 Sodium:solute symporter family CIW71_01235 PF00639 PPIC-type PPIASE domain CIW71_01235 PF09312 SurA N-terminal domain CIW71_01245 PF00480 ROK family CIW71_01250 PF03372 Endonuclease/Exonuclease/phosphatase family CIW71_01260 PF04226 Transglycosylase associated protein CIW71_01265 PF01648 4'-phosphopantetheinyl transferase superfamily CIW71_01270 PF16655 PhoD-like phosphatase, N-terminal domain CIW71_01270 PF09423 PhoD-like phosphatase CIW71_01275 PF09423 PhoD-like phosphatase CIW71_01275 PF16655 PhoD-like phosphatase, N-terminal domain CIW71_01280 PF02527 rRNA small subunit methyltransferase G CIW71_01300 PF13533 Biotin-lipoyl like CIW71_01310 PF00873 AcrB/AcrD/AcrF family CIW71_01315 PF00830 Ribosomal L28 family CIW71_01320 PF00471 Ribosomal protein L33 CIW71_01325 PF04909 Amidohydrolase CIW71_01335 PF04303 PrpF protein CIW71_01340 PF03737 Aldolase/RraA CIW71_01345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW71_01345 PF03466 LysR substrate binding domain CIW71_01350 PF13396 Phospholipase_D-nuclease N-terminal CIW71_01350 PF13091 PLD-like domain CIW71_01365 PF00580 UvrD/REP helicase N-terminal domain CIW71_01365 PF13361 UvrD-like helicase C-terminal domain CIW71_01375 PF14602 Hexapeptide repeat of succinyl-transferase CIW71_01375 PF12464 Maltose acetyltransferase CIW71_01400 PF05638 Type VI secretion system effector, Hcp CIW71_01425 PF00004 ATPase family associated with various cellular activities (AAA) CIW71_01425 PF17871 AAA lid domain CIW71_01425 PF10431 C-terminal, D2-small domain, of ClpB protein CIW71_01425 PF07724 AAA domain (Cdc48 subfamily) CIW71_01465 PF00328 Histidine phosphatase superfamily (branch 2) CIW71_01485 PF04542 Sigma-70 region 2 CIW71_01485 PF08281 Sigma-70, region 4 CIW71_01495 PF03793 PASTA domain CIW71_01495 PF00069 Protein kinase domain CIW71_01510 PF04717 Type VI secretion system, phage-baseplate injector CIW71_01550 PF00069 Protein kinase domain CIW71_01550 PF03793 PASTA domain CIW71_01580 PF01612 3'-5' exonuclease CIW71_01580 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CIW71_01580 PF01367 5'-3' exonuclease, C-terminal SAM fold CIW71_01580 PF00476 DNA polymerase family A CIW71_01590 PF01218 Coproporphyrinogen III oxidase CIW71_01610 PF00326 Prolyl oligopeptidase family CIW71_01610 PF07676 WD40-like Beta Propeller Repeat CIW71_01635 PF04820 Tryptophan halogenase CIW71_01640 PF00550 Phosphopantetheine attachment site CIW71_01650 PF01553 Acyltransferase CIW71_01655 PF07977 FabA-like domain CIW71_01715 PF00535 Glycosyl transferase family 2 CIW71_01725 PF00109 Beta-ketoacyl synthase, N-terminal domain CIW71_01725 PF02801 Beta-ketoacyl synthase, C-terminal domain CIW71_01730 PF05166 YcgL domain CIW71_01745 PF00723 Glycosyl hydrolases family 15 CIW71_01750 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CIW71_01750 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CIW71_01755 PF00999 Sodium/hydrogen exchanger family CIW71_01755 PF02254 TrkA-N domain CIW71_01760 PF00194 Eukaryotic-type carbonic anhydrase CIW71_01770 PF00571 CBS domain CIW71_01770 PF01769 Divalent cation transporter CIW71_01770 PF03448 MgtE intracellular N domain CIW71_01775 PF13380 CoA binding domain CIW71_01775 PF00583 Acetyltransferase (GNAT) family CIW71_01775 PF13607 Succinyl-CoA ligase like flavodoxin domain CIW71_01795 PF03477 ATP cone domain CIW71_01795 PF02867 Ribonucleotide reductase, barrel domain CIW71_01795 PF00317 Ribonucleotide reductase, all-alpha domain CIW71_01805 PF00268 Ribonucleotide reductase, small chain CIW71_01840 PF02558 Ketopantoate reductase PanE/ApbA CIW71_01840 PF08546 Ketopantoate reductase PanE/ApbA C terminal CIW71_01850 PF01061 ABC-2 type transporter CIW71_01855 PF00005 ABC transporter CIW71_01860 PF00111 2Fe-2S iron-sulfur cluster binding domain CIW71_01860 PF00970 Oxidoreductase FAD-binding domain CIW71_01860 PF00175 Oxidoreductase NAD-binding domain CIW71_01865 PF01965 DJ-1/PfpI family CIW71_01865 PF12833 Helix-turn-helix domain CIW71_01875 PF00593 TonB dependent receptor CIW71_01875 PF07715 TonB-dependent Receptor Plug Domain CIW71_01885 PF16916 Dimerisation domain of Zinc Transporter CIW71_01885 PF01545 Cation efflux family CIW71_01890 PF02583 Metal-sensitive transcriptional repressor CIW71_01895 PF01229 Glycosyl hydrolases family 39 CIW71_01905 PF01381 Helix-turn-helix CIW71_01915 PF00005 ABC transporter CIW71_01930 PF04820 Tryptophan halogenase CIW71_01955 PF00043 Glutathione S-transferase, C-terminal domain CIW71_01955 PF02798 Glutathione S-transferase, N-terminal domain CIW71_01960 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CIW71_01960 PF00326 Prolyl oligopeptidase family CIW71_01995 PF00490 Delta-aminolevulinic acid dehydratase CIW71_02010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW71_02010 PF03466 LysR substrate binding domain CIW71_02020 PF00667 FAD binding domain CIW71_02020 PF00258 Flavodoxin CIW71_02020 PF00175 Oxidoreductase NAD-binding domain CIW71_02030 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CIW71_02030 PF08501 Shikimate dehydrogenase substrate binding domain CIW71_02030 PF01488 Shikimate / quinate 5-dehydrogenase CIW71_02045 PF06733 DEAD_2 CIW71_02045 PF13307 Helicase C-terminal domain CIW71_02055 PF06628 Catalase-related immune-responsive CIW71_02055 PF00199 Catalase CIW71_02075 PF01207 Dihydrouridine synthase (Dus) CIW71_02085 PF00486 Transcriptional regulatory protein, C terminal CIW71_02085 PF00072 Response regulator receiver domain CIW71_02090 PF00512 His Kinase A (phospho-acceptor) domain CIW71_02090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_02090 PF00672 HAMP domain CIW71_02105 PF06167 Glucose-regulated metallo-peptidase M90 CIW71_02120 PF08279 HTH domain CIW71_02120 PF02237 Biotin protein ligase C terminal domain CIW71_02120 PF03099 Biotin/lipoate A/B protein ligase family CIW71_02125 PF03309 Type III pantothenate kinase CIW71_02155 PF02223 Thymidylate kinase CIW71_02185 PF00491 Arginase family CIW71_02200 PF05532 CsbD-like CIW71_02205 PF00579 tRNA synthetases class I (W and Y) CIW71_02210 PF00753 Metallo-beta-lactamase superfamily CIW71_02230 PF00892 EamA-like transporter family CIW71_02235 PF00892 EamA-like transporter family CIW71_02255 PF00005 ABC transporter CIW71_02260 PF13533 Biotin-lipoyl like CIW71_02265 PF07730 Histidine kinase CIW71_02270 PF00196 Bacterial regulatory proteins, luxR family CIW71_02270 PF00072 Response regulator receiver domain CIW71_02285 PF00199 Catalase CIW71_02290 PF04542 Sigma-70 region 2 CIW71_02290 PF08281 Sigma-70, region 4 CIW71_02300 PF02789 Cytosol aminopeptidase family, N-terminal domain CIW71_02300 PF00883 Cytosol aminopeptidase family, catalytic domain CIW71_02305 PF13419 Haloacid dehalogenase-like hydrolase CIW71_02310 PF01594 AI-2E family transporter CIW71_02330 PF00595 PDZ domain CIW71_02360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_02360 PF08521 Two-component sensor kinase N-terminal CIW71_02360 PF00512 His Kinase A (phospho-acceptor) domain CIW71_02365 PF00486 Transcriptional regulatory protein, C terminal CIW71_02365 PF00072 Response regulator receiver domain CIW71_02370 PF01370 NAD dependent epimerase/dehydratase family CIW71_02370 PF08338 Domain of unknown function (DUF1731) CIW71_02405 PF01139 tRNA-splicing ligase RtcB CIW71_02430 PF00440 Bacterial regulatory proteins, tetR family CIW71_02435 PF00970 Oxidoreductase FAD-binding domain CIW71_02435 PF00111 2Fe-2S iron-sulfur cluster binding domain CIW71_02435 PF00175 Oxidoreductase NAD-binding domain CIW71_02440 PF00487 Fatty acid desaturase CIW71_02445 PF00563 EAL domain CIW71_02445 PF12792 CSS motif domain associated with EAL CIW71_02460 PF13335 Magnesium chelatase, subunit ChlI C-terminal CIW71_02460 PF01078 Magnesium chelatase, subunit ChlI CIW71_02465 PF04380 Membrane fusogenic activity CIW71_02470 PF00543 Nitrogen regulatory protein P-II CIW71_02500 PF17284 Spermidine synthase tetramerisation domain CIW71_02505 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CIW71_02505 PF17810 Arginine decarboxylase helical bundle domain CIW71_02505 PF17944 Arginine decarboxylase C-terminal helical extension CIW71_02510 PF13193 AMP-binding enzyme C-terminal domain CIW71_02510 PF00501 AMP-binding enzyme CIW71_02510 PF00975 Thioesterase domain CIW71_02510 PF00668 Condensation domain CIW71_02510 PF00550 Phosphopantetheine attachment site CIW71_02515 PF03033 Glycosyltransferase family 28 N-terminal domain CIW71_02525 PF00106 short chain dehydrogenase CIW71_02540 PF03485 Arginyl tRNA synthetase N terminal domain CIW71_02540 PF00750 tRNA synthetases class I (R) CIW71_02540 PF05746 DALR anticodon binding domain CIW71_02545 PF04002 RadC-like JAB domain CIW71_02550 PF04127 DNA / pantothenate metabolism flavoprotein CIW71_02550 PF02441 Flavoprotein CIW71_02555 PF00692 dUTPase CIW71_02560 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CIW71_02560 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CIW71_02560 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CIW71_02560 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CIW71_02575 PF00535 Glycosyl transferase family 2 CIW71_02580 PF01370 NAD dependent epimerase/dehydratase family CIW71_02595 PF17762 HTH domain found in ParB protein CIW71_02595 PF02195 ParB-like nuclease domain CIW71_02600 PF13614 AAA domain CIW71_02610 PF00156 Phosphoribosyl transferase domain CIW71_02615 PF03372 Endonuclease/Exonuclease/phosphatase family CIW71_02620 PF07690 Major Facilitator Superfamily CIW71_02630 PF03702 Anhydro-N-acetylmuramic acid kinase CIW71_02635 PF01551 Peptidase family M23 CIW71_02635 PF04225 Opacity-associated protein A LysM-like domain CIW71_02640 PF00579 tRNA synthetases class I (W and Y) CIW71_02675 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CIW71_02675 PF14850 DNA-binding domain of Proline dehydrogenase CIW71_02675 PF01619 Proline dehydrogenase CIW71_02675 PF00171 Aldehyde dehydrogenase family CIW71_02685 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CIW71_02685 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CIW71_02690 PF00115 Cytochrome C and Quinol oxidase polypeptide I CIW71_02700 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 CIW71_02705 PF00510 Cytochrome c oxidase subunit III CIW71_02730 PF01040 UbiA prenyltransferase family CIW71_02740 PF13593 SBF-like CPA transporter family (DUF4137) CIW71_02745 PF01807 CHC2 zinc finger CIW71_02745 PF08278 DNA primase DnaG DnaB-binding CIW71_02745 PF10410 DnaB-helicase binding domain of primase CIW71_02745 PF08275 DNA primase catalytic core, N-terminal domain CIW71_02750 PF03631 Virulence factor BrkB CIW71_02760 PF09424 Yqey-like protein CIW71_02765 PF01165 Ribosomal protein S21 CIW71_02770 PF00814 Glycoprotease family CIW71_02775 PF02152 Dihydroneopterin aldolase CIW71_02780 PF00933 Glycosyl hydrolase family 3 N terminal domain CIW71_02780 PF01915 Glycosyl hydrolase family 3 C-terminal domain CIW71_02780 PF14310 Fibronectin type III-like domain CIW71_02785 PF07995 Glucose / Sorbosone dehydrogenase CIW71_02790 PF05360 yiaA/B two helix domain CIW71_02805 PF13520 Amino acid permease CIW71_02815 PF13378 Enolase C-terminal domain-like CIW71_02815 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CIW71_02825 PF01510 N-acetylmuramoyl-L-alanine amidase CIW71_02830 PF01427 D-ala-D-ala dipeptidase CIW71_02880 PF07063 Domain of unknown function (DUF1338) CIW71_02885 PF00873 AcrB/AcrD/AcrF family CIW71_02890 PF00873 AcrB/AcrD/AcrF family CIW71_02895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CIW71_02900 PF07687 Peptidase dimerisation domain CIW71_02900 PF01546 Peptidase family M20/M25/M40 CIW71_02905 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CIW71_02905 PF14489 QueF-like protein CIW71_02920 PF03971 Monomeric isocitrate dehydrogenase CIW71_02930 PF03466 LysR substrate binding domain CIW71_02930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW71_02935 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) CIW71_02945 PF07497 Rho termination factor, RNA-binding domain CIW71_02945 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CIW71_02945 PF07498 Rho termination factor, N-terminal domain CIW71_02950 PF00085 Thioredoxin CIW71_02955 PF00270 DEAD/DEAH box helicase CIW71_02955 PF00271 Helicase conserved C-terminal domain CIW71_02955 PF12300 ATP-dependent RNA helicase RhlB CIW71_02960 PF00005 ABC transporter CIW71_02965 PF18075 FtsX extracellular domain CIW71_02970 PF00072 Response regulator receiver domain CIW71_02975 PF03167 Uracil DNA glycosylase superfamily CIW71_02980 PF04542 Sigma-70 region 2 CIW71_02980 PF04545 Sigma-70, region 4 CIW71_02985 PF03458 UPF0126 domain CIW71_02990 PF07992 Pyridine nucleotide-disulphide oxidoreductase CIW71_03005 PF00043 Glutathione S-transferase, C-terminal domain CIW71_03005 PF13417 Glutathione S-transferase, N-terminal domain CIW71_03010 PF17764 3′ DNA-binding domain (3′BD) CIW71_03010 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CIW71_03010 PF00271 Helicase conserved C-terminal domain CIW71_03010 PF00270 DEAD/DEAH box helicase CIW71_03010 PF18074 Primosomal protein N C-terminal domain CIW71_03030 PF01554 MatE CIW71_03035 PF01343 Peptidase family S49 CIW71_03060 PF01300 Telomere recombination CIW71_03065 PF13368 Topoisomerase C-terminal repeat CIW71_03065 PF01131 DNA topoisomerase CIW71_03065 PF01751 Toprim domain CIW71_03075 PF00114 Pilin (bacterial filament) CIW71_03075 PF07963 Prokaryotic N-terminal methylation motif CIW71_03080 PF04361 Protein of unknown function (DUF494) CIW71_03085 PF02481 DNA recombination-mediator protein A CIW71_03085 PF17782 DprA winged helix domain CIW71_03090 PF01476 LysM domain CIW71_03095 PF01327 Polypeptide deformylase CIW71_03100 PF00551 Formyl transferase CIW71_03100 PF02911 Formyl transferase, C-terminal domain CIW71_03105 PF01029 NusB family CIW71_03105 PF01189 16S rRNA methyltransferase RsmB/F CIW71_03120 PF00535 Glycosyl transferase family 2 CIW71_03140 PF00925 GTP cyclohydrolase II CIW71_03160 PF03279 Bacterial lipid A biosynthesis acyltransferase CIW71_03165 PF02580 D-Tyr-tRNA(Tyr) deacylase CIW71_03170 PF04546 Sigma-70, non-essential region CIW71_03170 PF00140 Sigma-70 factor, region 1.2 CIW71_03170 PF04542 Sigma-70 region 2 CIW71_03170 PF04539 Sigma-70 region 3 CIW71_03170 PF04545 Sigma-70, region 4 CIW71_03170 PF03979 Sigma-70 factor, region 1.1 CIW71_03185 PF13356 Arm DNA-binding domain CIW71_03185 PF00589 Phage integrase family CIW71_03190 PF12728 Helix-turn-helix domain CIW71_03220 PF00176 SNF2 family N-terminal domain CIW71_03220 PF00271 Helicase conserved C-terminal domain CIW71_03250 PF00557 Metallopeptidase family M24 CIW71_03295 PF02525 Flavodoxin-like fold CIW71_03300 PF03466 LysR substrate binding domain CIW71_03300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW71_03325 PF00005 ABC transporter CIW71_03340 PF00593 TonB dependent receptor CIW71_03340 PF07715 TonB-dependent Receptor Plug Domain CIW71_03385 PF08240 Alcohol dehydrogenase GroES-like domain CIW71_03385 PF00107 Zinc-binding dehydrogenase CIW71_03385 PF13823 Alcohol dehydrogenase GroES-associated CIW71_03400 PF00664 ABC transporter transmembrane region CIW71_03400 PF00005 ABC transporter CIW71_03410 PF03275 UDP-galactopyranose mutase CIW71_03420 PF16363 GDP-mannose 4,6 dehydratase CIW71_03440 PF02322 Cytochrome bd terminal oxidase subunit II CIW71_03445 PF01654 Cytochrome bd terminal oxidase subunit I CIW71_03460 PF02954 Bacterial regulatory protein, Fis family CIW71_03460 PF00072 Response regulator receiver domain CIW71_03460 PF00158 Sigma-54 interaction domain CIW71_03495 PF05067 Manganese containing catalase CIW71_03500 PF05974 Domain of unknown function (DUF892) CIW71_03530 PF06580 Histidine kinase CIW71_03530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_03530 PF00672 HAMP domain CIW71_03530 PF02743 Cache domain CIW71_03535 PF00072 Response regulator receiver domain CIW71_03535 PF04397 LytTr DNA-binding domain CIW71_03545 PF13520 Amino acid permease CIW71_03565 PF01431 Peptidase family M13 CIW71_03565 PF05649 Peptidase family M13 CIW71_03580 PF00248 Aldo/keto reductase family CIW71_03585 PF03358 NADPH-dependent FMN reductase CIW71_03590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW71_03590 PF03466 LysR substrate binding domain CIW71_03600 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CIW71_03610 PF03167 Uracil DNA glycosylase superfamily CIW71_03615 PF02469 Fasciclin domain CIW71_03625 PF00999 Sodium/hydrogen exchanger family CIW71_03630 PF00005 ABC transporter CIW71_03635 PF01061 ABC-2 type transporter CIW71_03665 PF00691 OmpA family CIW71_03665 PF13677 Membrane MotB of proton-channel complex MotA/MotB CIW71_03670 PF01618 MotA/TolQ/ExbB proton channel family CIW71_03680 PF01641 SelR domain CIW71_03690 PF01037 Lrp/AsnC ligand binding domain CIW71_03695 PF01266 FAD dependent oxidoreductase CIW71_03700 PF00842 Alanine racemase, C-terminal domain CIW71_03700 PF01168 Alanine racemase, N-terminal domain CIW71_03720 PF00512 His Kinase A (phospho-acceptor) domain CIW71_03720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_03720 PF00989 PAS fold CIW71_03730 PF07995 Glucose / Sorbosone dehydrogenase CIW71_03740 PF08468 Methyltransferase small domain N-terminal CIW71_03740 PF05175 Methyltransferase small domain CIW71_03745 PF01479 S4 domain CIW71_03745 PF00849 RNA pseudouridylate synthase CIW71_03750 PF13419 Haloacid dehalogenase-like hydrolase CIW71_03775 PF00072 Response regulator receiver domain CIW71_03775 PF01627 Hpt domain CIW71_03775 PF18415 Histidine kinase receptor ArcB trans-membrane domain CIW71_03775 PF00512 His Kinase A (phospho-acceptor) domain CIW71_03775 PF00989 PAS fold CIW71_03775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_03785 PF04461 Protein of unknown function (DUF520) CIW71_03790 PF00892 EamA-like transporter family CIW71_03795 PF00005 ABC transporter CIW71_03795 PF09383 NIL domain CIW71_03800 PF00528 Binding-protein-dependent transport system inner membrane component CIW71_03805 PF03180 NLPA lipoprotein CIW71_03860 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CIW71_03860 PF00364 Biotin-requiring enzyme CIW71_03860 PF02817 e3 binding domain CIW71_03870 PF07992 Pyridine nucleotide-disulphide oxidoreductase CIW71_03870 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CIW71_03890 PF00119 ATP synthase A chain CIW71_03895 PF00137 ATP synthase subunit C CIW71_03900 PF00430 ATP synthase B/B' CF(0) CIW71_03905 PF00213 ATP synthase delta (OSCP) subunit CIW71_03910 PF00306 ATP synthase alpha/beta chain, C terminal domain CIW71_03910 PF02874 ATP synthase alpha/beta family, beta-barrel domain CIW71_03910 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CIW71_03915 PF00231 ATP synthase CIW71_03920 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CIW71_03920 PF02874 ATP synthase alpha/beta family, beta-barrel domain CIW71_03925 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CIW71_03925 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CIW71_03940 PF12804 MobA-like NTP transferase domain CIW71_03940 PF14602 Hexapeptide repeat of succinyl-transferase CIW71_03940 PF00132 Bacterial transferase hexapeptide (six repeats) CIW71_03945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_03945 PF00512 His Kinase A (phospho-acceptor) domain CIW71_03950 PF00072 Response regulator receiver domain CIW71_03950 PF00158 Sigma-54 interaction domain CIW71_03950 PF02954 Bacterial regulatory protein, Fis family CIW71_03960 PF02687 FtsX-like permease family CIW71_03960 PF12704 MacB-like periplasmic core domain CIW71_03965 PF12704 MacB-like periplasmic core domain CIW71_03965 PF02687 FtsX-like permease family CIW71_03970 PF02687 FtsX-like permease family CIW71_03970 PF12704 MacB-like periplasmic core domain CIW71_03970 PF00005 ABC transporter CIW71_03975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CIW71_03980 PF01380 SIS domain CIW71_04010 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CIW71_04015 PF05275 Copper resistance protein B precursor (CopB) CIW71_04020 PF07732 Multicopper oxidase CIW71_04020 PF07731 Multicopper oxidase CIW71_04020 PF00394 Multicopper oxidase CIW71_04035 PF01432 Peptidase family M3 CIW71_04045 PF02801 Beta-ketoacyl synthase, C-terminal domain CIW71_04045 PF00109 Beta-ketoacyl synthase, N-terminal domain CIW71_04050 PF07977 FabA-like domain CIW71_04055 PF00817 impB/mucB/samB family CIW71_04055 PF11799 impB/mucB/samB family C-terminal domain CIW71_04060 PF13419 Haloacid dehalogenase-like hydrolase CIW71_04065 PF00593 TonB dependent receptor CIW71_04065 PF07715 TonB-dependent Receptor Plug Domain CIW71_04070 PF00756 Putative esterase CIW71_04080 PF13185 GAF domain CIW71_04095 PF01242 6-pyruvoyl tetrahydropterin synthase CIW71_04105 PF07715 TonB-dependent Receptor Plug Domain CIW71_04105 PF00593 TonB dependent receptor CIW71_04115 PF00271 Helicase conserved C-terminal domain CIW71_04115 PF00270 DEAD/DEAH box helicase CIW71_04130 PF02798 Glutathione S-transferase, N-terminal domain CIW71_04130 PF14497 Glutathione S-transferase, C-terminal domain CIW71_04135 PF00437 Type II/IV secretion system protein CIW71_04155 PF00571 CBS domain CIW71_04155 PF00291 Pyridoxal-phosphate dependent enzyme CIW71_04160 PF01053 Cys/Met metabolism PLP-dependent enzyme CIW71_04170 PF13439 Glycosyltransferase Family 4 CIW71_04170 PF00534 Glycosyl transferases group 1 CIW71_04180 PF00005 ABC transporter CIW71_04185 PF13847 Methyltransferase domain CIW71_04185 PF00069 Protein kinase domain CIW71_04190 PF00534 Glycosyl transferases group 1 CIW71_04190 PF13477 Glycosyl transferase 4-like CIW71_04195 PF16363 GDP-mannose 4,6 dehydratase CIW71_04200 PF16363 GDP-mannose 4,6 dehydratase CIW71_04230 PF00535 Glycosyl transferase family 2 CIW71_04240 PF01012 Electron transfer flavoprotein domain CIW71_04240 PF00766 Electron transfer flavoprotein FAD-binding domain CIW71_04245 PF01012 Electron transfer flavoprotein domain CIW71_04250 PF16363 GDP-mannose 4,6 dehydratase CIW71_04255 PF00483 Nucleotidyl transferase CIW71_04260 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CIW71_04265 PF04321 RmlD substrate binding domain CIW71_04270 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CIW71_04270 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CIW71_04270 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CIW71_04275 PF01050 Mannose-6-phosphate isomerase CIW71_04275 PF00483 Nucleotidyl transferase CIW71_04280 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CIW71_04280 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CIW71_04280 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CIW71_04280 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CIW71_04285 PF01144 Coenzyme A transferase CIW71_04290 PF01144 Coenzyme A transferase CIW71_04310 PF03886 ABC-type transport auxiliary lipoprotein component CIW71_04310 PF02470 MlaD protein CIW71_04315 PF00005 ABC transporter CIW71_04320 PF02405 Permease MlaE CIW71_04330 PF00816 H-NS histone family CIW71_04335 PF03129 Anticodon binding domain CIW71_04335 PF04073 Aminoacyl-tRNA editing domain CIW71_04335 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CIW71_04345 PF01066 CDP-alcohol phosphatidyltransferase CIW71_04360 PF00544 Pectate lyase CIW71_04365 PF01464 Transglycosylase SLT domain CIW71_04365 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CIW71_04375 PF08264 Anticodon-binding domain of tRNA CIW71_04375 PF00133 tRNA synthetases class I (I, L, M and V) CIW71_04375 PF10458 Valyl tRNA synthetase tRNA binding arm CIW71_04390 PF02789 Cytosol aminopeptidase family, N-terminal domain CIW71_04390 PF00883 Cytosol aminopeptidase family, catalytic domain CIW71_04400 PF03739 Lipopolysaccharide export system permease LptF/LptG CIW71_04415 PF02899 Phage integrase, N-terminal SAM-like domain CIW71_04415 PF00589 Phage integrase family CIW71_04430 PF13098 Thioredoxin-like domain CIW71_04430 PF10411 Disulfide bond isomerase protein N-terminus CIW71_04445 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CIW71_04445 PF02769 AIR synthase related protein, C-terminal domain CIW71_04445 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CIW71_04450 PF13018 Extended Signal Peptide of Type V secretion system CIW71_04450 PF03895 YadA-like membrane anchor domain CIW71_04450 PF05658 Head domain of trimeric autotransporter adhesin CIW71_04450 PF05662 Coiled stalk of trimeric autotransporter adhesin CIW71_04455 PF00082 Subtilase family CIW71_04455 PF04151 Bacterial pre-peptidase C-terminal domain CIW71_04460 PF05662 Coiled stalk of trimeric autotransporter adhesin CIW71_04460 PF05658 Head domain of trimeric autotransporter adhesin CIW71_04460 PF03895 YadA-like membrane anchor domain CIW71_04460 PF13018 Extended Signal Peptide of Type V secretion system CIW71_04465 PF04151 Bacterial pre-peptidase C-terminal domain CIW71_04465 PF00082 Subtilase family CIW71_04470 PF00437 Type II/IV secretion system protein CIW71_04470 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CIW71_04480 PF00482 Type II secretion system (T2SS), protein F CIW71_04485 PF08334 Type II secretion system (T2SS), protein G CIW71_04490 PF12019 Type II transport protein GspH CIW71_04495 PF07963 Prokaryotic N-terminal methylation motif CIW71_04505 PF03934 Type II secretion system (T2SS), protein K CIW71_04510 PF05137 Fimbrial assembly protein (PilN) CIW71_04515 PF10741 Type II secretion system (T2SS), protein M subtype b CIW71_04525 PF00263 Bacterial type II and III secretion system protein CIW71_04525 PF03958 Bacterial type II/III secretion system short domain CIW71_04540 PF07702 UTRA domain CIW71_04540 PF00392 Bacterial regulatory proteins, gntR family CIW71_04550 PF00593 TonB dependent receptor CIW71_04550 PF07715 TonB-dependent Receptor Plug Domain CIW71_04595 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CIW71_04595 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CIW71_04610 PF07238 PilZ domain CIW71_04610 PF03552 Cellulose synthase CIW71_04610 PF00535 Glycosyl transferase family 2 CIW71_04615 PF03170 Bacterial cellulose synthase subunit CIW71_04620 PF01270 Glycosyl hydrolases family 8 CIW71_04625 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) CIW71_04645 PF03960 ArsC family CIW71_04655 PF01327 Polypeptide deformylase CIW71_04660 PF02645 Uncharacterised protein, DegV family COG1307 CIW71_04685 PF01979 Amidohydrolase family CIW71_04690 PF01979 Amidohydrolase family CIW71_04705 PF00462 Glutaredoxin CIW71_04710 PF01522 Polysaccharide deacetylase CIW71_04715 PF00593 TonB dependent receptor CIW71_04715 PF07715 TonB-dependent Receptor Plug Domain CIW71_04740 PF03412 Peptidase C39 family CIW71_04740 PF00005 ABC transporter CIW71_04740 PF00664 ABC transporter transmembrane region CIW71_04790 PF03193 RsgA GTPase CIW71_04805 PF00128 Alpha amylase, catalytic domain CIW71_04820 PF00356 Bacterial regulatory proteins, lacI family CIW71_04825 PF00106 short chain dehydrogenase CIW71_04830 PF03600 Citrate transporter CIW71_04845 PF00072 Response regulator receiver domain CIW71_04845 PF00486 Transcriptional regulatory protein, C terminal CIW71_04850 PF00512 His Kinase A (phospho-acceptor) domain CIW71_04850 PF08521 Two-component sensor kinase N-terminal CIW71_04850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_04860 PF00072 Response regulator receiver domain CIW71_04860 PF00196 Bacterial regulatory proteins, luxR family CIW71_04875 PF00248 Aldo/keto reductase family CIW71_04880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW71_04880 PF03466 LysR substrate binding domain CIW71_04890 PF07690 Major Facilitator Superfamily CIW71_04895 PF02743 Cache domain CIW71_04895 PF00512 His Kinase A (phospho-acceptor) domain CIW71_04895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_04910 PF00375 Sodium:dicarboxylate symporter family CIW71_04915 PF01515 Phosphate acetyl/butaryl transferase CIW71_04915 PF03949 Malic enzyme, NAD binding domain CIW71_04915 PF00390 Malic enzyme, N-terminal domain CIW71_04940 PF03279 Bacterial lipid A biosynthesis acyltransferase CIW71_04950 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CIW71_04955 PF02321 Outer membrane efflux protein CIW71_04970 PF00990 Diguanylate cyclase, GGDEF domain CIW71_04970 PF17151 Periplasmic sensor domain CIW71_04975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW71_04980 PF00330 Aconitase family (aconitate hydratase) CIW71_04985 PF00694 Aconitase C-terminal domain CIW71_04990 PF00180 Isocitrate/isopropylmalate dehydrogenase CIW71_04995 PF00682 HMGL-like CIW71_04995 PF08502 LeuA allosteric (dimerisation) domain CIW71_05000 PF00291 Pyridoxal-phosphate dependent enzyme CIW71_05010 PF00205 Thiamine pyrophosphate enzyme, central domain CIW71_05010 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CIW71_05010 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CIW71_05015 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CIW71_05015 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CIW71_05025 PF00672 HAMP domain CIW71_05025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW71_05025 PF02203 Tar ligand binding domain homologue CIW71_05030 PF07715 TonB-dependent Receptor Plug Domain CIW71_05030 PF00593 TonB dependent receptor CIW71_05040 PF01964 Radical SAM ThiC family CIW71_05040 PF13667 ThiC-associated domain CIW71_05045 PF00486 Transcriptional regulatory protein, C terminal CIW71_05045 PF18500 CadC C-terminal domain 1 CIW71_05050 PF12833 Helix-turn-helix domain CIW71_05055 PF07715 TonB-dependent Receptor Plug Domain CIW71_05055 PF00593 TonB dependent receptor CIW71_05065 PF00719 Inorganic pyrophosphatase CIW71_05075 PF03030 Inorganic H+ pyrophosphatase CIW71_05090 PF00365 Phosphofructokinase CIW71_05100 PF01225 Mur ligase family, catalytic domain CIW71_05100 PF08245 Mur ligase middle domain CIW71_05100 PF02875 Mur ligase family, glutamate ligase domain CIW71_05115 PF01062 Bestrophin, RFP-TM, chloride channel CIW71_05120 PF01569 PAP2 superfamily CIW71_05135 PF00520 Ion transport protein CIW71_05135 PF00027 Cyclic nucleotide-binding domain CIW71_05140 PF00202 Aminotransferase class-III CIW71_05155 PF01593 Flavin containing amine oxidoreductase CIW71_05160 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CIW71_05160 PF00034 Cytochrome c CIW71_05170 PF00155 Aminotransferase class I and II CIW71_05175 PF00127 Copper binding proteins, plastocyanin/azurin family CIW71_05180 PF00196 Bacterial regulatory proteins, luxR family CIW71_05180 PF17874 MalT-like TPR region CIW71_05185 PF00202 Aminotransferase class-III CIW71_05200 PF02581 Thiamine monophosphate synthase CIW71_05205 PF00301 Rubredoxin CIW71_05210 PF13369 Transglutaminase-like superfamily CIW71_05220 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CIW71_05230 PF01812 5-formyltetrahydrofolate cyclo-ligase family CIW71_05240 PF05164 Cell division protein ZapA CIW71_05250 PF03695 Uncharacterised protein family (UPF0149) CIW71_05255 PF05195 Aminopeptidase P, N-terminal domain CIW71_05255 PF00557 Metallopeptidase family M24 CIW71_05265 PF00557 Metallopeptidase family M24 CIW71_05280 PF04055 Radical SAM superfamily CIW71_05280 PF06969 HemN C-terminal domain CIW71_05285 PF01725 Ham1 family CIW71_05295 PF03725 3' exoribonuclease family, domain 2 CIW71_05295 PF01138 3' exoribonuclease family, domain 1 CIW71_05300 PF03755 YicC-like family, N-terminal region CIW71_05300 PF08340 Domain of unknown function (DUF1732) CIW71_05305 PF00625 Guanylate kinase CIW71_05310 PF01192 RNA polymerase Rpb6 CIW71_05315 PF02824 TGS domain CIW71_05315 PF13291 ACT domain CIW71_05315 PF04607 Region found in RelA / SpoT proteins CIW71_05320 PF01042 Endoribonuclease L-PSP CIW71_05325 PF17191 RecG wedge domain CIW71_05325 PF00270 DEAD/DEAH box helicase CIW71_05325 PF00271 Helicase conserved C-terminal domain CIW71_05330 PF01156 Inosine-uridine preferring nucleoside hydrolase CIW71_05335 PF01197 Ribosomal protein L31 CIW71_05340 PF00285 Citrate synthase, C-terminal domain CIW71_05350 PF00912 Transglycosylase CIW71_05350 PF17092 Penicillin-binding protein OB-like domain CIW71_05350 PF00905 Penicillin binding protein transpeptidase domain CIW71_05375 PF11741 AMIN domain CIW71_05375 PF07660 Secretin and TonB N terminus short domain CIW71_05375 PF03958 Bacterial type II/III secretion system short domain CIW71_05375 PF00263 Bacterial type II and III secretion system protein CIW71_05385 PF07726 ATPase family associated with various cellular activities (AAA) CIW71_05385 PF17863 AAA lid domain CIW71_05405 PF07584 Aerotolerance regulator N-terminal CIW71_05405 PF00092 von Willebrand factor type A domain CIW71_05420 PF00375 Sodium:dicarboxylate symporter family CIW71_05425 PF00456 Transketolase, thiamine diphosphate binding domain CIW71_05425 PF02780 Transketolase, C-terminal domain CIW71_05425 PF02779 Transketolase, pyrimidine binding domain CIW71_05435 PF07715 TonB-dependent Receptor Plug Domain CIW71_05435 PF00593 TonB dependent receptor CIW71_05445 PF04225 Opacity-associated protein A LysM-like domain CIW71_05445 PF01551 Peptidase family M23 CIW71_05490 PF03459 TOBE domain CIW71_05490 PF00005 ABC transporter CIW71_05495 PF00528 Binding-protein-dependent transport system inner membrane component CIW71_05505 PF00753 Metallo-beta-lactamase superfamily CIW71_05505 PF04273 Putative phosphatase (DUF442) CIW71_05515 PF03922 OmpW family CIW71_05520 PF03922 OmpW family CIW71_05530 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CIW71_05530 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CIW71_05555 PF00162 Phosphoglycerate kinase CIW71_05565 PF00224 Pyruvate kinase, barrel domain CIW71_05565 PF02887 Pyruvate kinase, alpha/beta domain CIW71_05580 PF00274 Fructose-bisphosphate aldolase class-I CIW71_05585 PF01661 Macro domain CIW71_05595 PF00291 Pyridoxal-phosphate dependent enzyme CIW71_05600 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CIW71_05600 PF14824 Sirohaem biosynthesis protein central CIW71_05600 PF10414 Sirohaem synthase dimerisation region CIW71_05605 PF03466 LysR substrate binding domain CIW71_05605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW71_05620 PF00512 His Kinase A (phospho-acceptor) domain CIW71_05620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_05620 PF01627 Hpt domain CIW71_05620 PF00072 Response regulator receiver domain CIW71_05640 PF01507 Phosphoadenosine phosphosulfate reductase family CIW71_05645 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CIW71_05645 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CIW71_05650 PF00667 FAD binding domain CIW71_05650 PF00258 Flavodoxin CIW71_05650 PF00175 Oxidoreductase NAD-binding domain CIW71_05655 PF01507 Phosphoadenosine phosphosulfate reductase family CIW71_05660 PF00009 Elongation factor Tu GTP binding domain CIW71_05665 PF00529 HlyD membrane-fusion protein of T1SS CIW71_05665 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CIW71_05670 PF00873 AcrB/AcrD/AcrF family CIW71_05695 PF11838 ERAP1-like C-terminal domain CIW71_05695 PF01433 Peptidase family M1 domain CIW71_05705 PF08032 RNA 2'-O ribose methyltransferase substrate binding CIW71_05705 PF00588 SpoU rRNA Methylase family CIW71_05710 PF00135 Carboxylesterase family CIW71_05720 PF14508 Glycosyl-hydrolase 97 N-terminal CIW71_05720 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation CIW71_05720 PF10566 Glycoside hydrolase 97 CIW71_05725 PF00703 Glycosyl hydrolases family 2 CIW71_05725 PF02837 Glycosyl hydrolases family 2, sugar binding domain CIW71_05725 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain CIW71_05735 PF00356 Bacterial regulatory proteins, lacI family CIW71_05745 PF01741 Large-conductance mechanosensitive channel, MscL CIW71_05770 PF02080 TrkA-C domain CIW71_05770 PF03600 Citrate transporter CIW71_05775 PF02390 Putative methyltransferase CIW71_05785 PF05690 Thiazole biosynthesis protein ThiG CIW71_05795 PF03797 Autotransporter beta-domain CIW71_05795 PF00657 GDSL-like Lipase/Acylhydrolase CIW71_05810 PF01734 Patatin-like phospholipase CIW71_05870 PF01695 IstB-like ATP binding protein CIW71_05875 PF02796 Helix-turn-helix domain of resolvase CIW71_05875 PF00665 Integrase core domain CIW71_05890 PF01443 Viral (Superfamily 1) RNA helicase CIW71_05890 PF03389 MobA/MobL family CIW71_05890 PF17841 BID domain of Bartonella effector protein (Bep) CIW71_05935 PF00128 Alpha amylase, catalytic domain CIW71_05935 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CIW71_05940 PF08443 RimK-like ATP-grasp domain CIW71_05940 PF18030 RimK PreATP-grasp domain CIW71_05950 PF00072 Response regulator receiver domain CIW71_05950 PF00486 Transcriptional regulatory protein, C terminal CIW71_05955 PF00989 PAS fold CIW71_05955 PF00512 His Kinase A (phospho-acceptor) domain CIW71_05955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_05955 PF16736 Single Cache-like CIW71_05985 PF01121 Dephospho-CoA kinase CIW71_05990 PF06750 Bacterial Peptidase A24 N-terminal domain CIW71_05990 PF01478 Type IV leader peptidase family CIW71_05995 PF00482 Type II secretion system (T2SS), protein F CIW71_06005 PF00114 Pilin (bacterial filament) CIW71_06005 PF07963 Prokaryotic N-terminal methylation motif CIW71_06010 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CIW71_06010 PF00437 Type II/IV secretion system protein CIW71_06015 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CIW71_06015 PF00437 Type II/IV secretion system protein CIW71_06020 PF02954 Bacterial regulatory protein, Fis family CIW71_06020 PF00158 Sigma-54 interaction domain CIW71_06020 PF00072 Response regulator receiver domain CIW71_06025 PF00512 His Kinase A (phospho-acceptor) domain CIW71_06025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_06030 PF00549 CoA-ligase CIW71_06030 PF08442 ATP-grasp domain CIW71_06035 PF00549 CoA-ligase CIW71_06035 PF02629 CoA binding domain CIW71_06050 PF02540 NAD synthase CIW71_06050 PF00795 Carbon-nitrogen hydrolase CIW71_06060 PF13525 Outer membrane lipoprotein CIW71_06065 PF00849 RNA pseudouridylate synthase CIW71_06080 PF04134 Protein of unknown function, DUF393 CIW71_06085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW71_06085 PF02203 Tar ligand binding domain homologue CIW71_06085 PF00672 HAMP domain CIW71_06095 PF01011 PQQ enzyme repeat CIW71_06100 PF00982 Glycosyltransferase family 20 CIW71_06105 PF00723 Glycosyl hydrolases family 15 CIW71_06110 PF02358 Trehalose-phosphatase CIW71_06115 PF07715 TonB-dependent Receptor Plug Domain CIW71_06115 PF00593 TonB dependent receptor CIW71_06150 PF01541 GIY-YIG catalytic domain CIW71_06155 PF00593 TonB dependent receptor CIW71_06155 PF07715 TonB-dependent Receptor Plug Domain CIW71_06165 PF00248 Aldo/keto reductase family CIW71_06170 PF09084 NMT1/THI5 like CIW71_06175 PF00528 Binding-protein-dependent transport system inner membrane component CIW71_06180 PF00005 ABC transporter CIW71_06185 PF02861 Clp amino terminal domain, pathogenicity island component CIW71_06185 PF17871 AAA lid domain CIW71_06185 PF00004 ATPase family associated with various cellular activities (AAA) CIW71_06185 PF10431 C-terminal, D2-small domain, of ClpB protein CIW71_06185 PF07724 AAA domain (Cdc48 subfamily) CIW71_06190 PF07715 TonB-dependent Receptor Plug Domain CIW71_06190 PF00593 TonB dependent receptor CIW71_06205 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CIW71_06205 PF12557 Cob(I)alamin adenosyltransferase N terminal CIW71_06210 PF17113 Regulatory signalling modulator protein AmpE CIW71_06210 PF03186 CobD/Cbib protein CIW71_06220 PF07685 CobB/CobQ-like glutamine amidotransferase domain CIW71_06220 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CIW71_06225 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CIW71_06230 PF02277 Phosphoribosyltransferase CIW71_06240 PF02654 Cobalamin-5-phosphate synthase CIW71_06250 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CIW71_06250 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CIW71_06260 PF07690 Major Facilitator Superfamily CIW71_06265 PF06276 Ferric iron reductase FhuF-like transporter CIW71_06265 PF04183 IucA / IucC family CIW71_06275 PF07715 TonB-dependent Receptor Plug Domain CIW71_06275 PF07660 Secretin and TonB N terminus short domain CIW71_06275 PF00593 TonB dependent receptor CIW71_06300 PF02254 TrkA-N domain CIW71_06300 PF00999 Sodium/hydrogen exchanger family CIW71_06315 PF00593 TonB dependent receptor CIW71_06315 PF07715 TonB-dependent Receptor Plug Domain CIW71_06335 PF00593 TonB dependent receptor CIW71_06335 PF07715 TonB-dependent Receptor Plug Domain CIW71_06340 PF12848 ABC transporter CIW71_06340 PF00005 ABC transporter CIW71_06350 PF03466 LysR substrate binding domain CIW71_06350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW71_06380 PF07690 Major Facilitator Superfamily CIW71_06395 PF00152 tRNA synthetases class II (D, K and N) CIW71_06395 PF02938 GAD domain CIW71_06395 PF01336 OB-fold nucleic acid binding domain CIW71_06410 PF01709 Transcriptional regulator CIW71_06415 PF02075 Crossover junction endodeoxyribonuclease RuvC CIW71_06420 PF01330 RuvA N terminal domain CIW71_06420 PF07499 RuvA, C-terminal domain CIW71_06425 PF02705 K+ potassium transporter CIW71_06435 PF05496 Holliday junction DNA helicase RuvB P-loop domain CIW71_06435 PF17864 RuvB AAA lid domain CIW71_06435 PF05491 RuvB C-terminal winged helix domain CIW71_06440 PF03061 Thioesterase superfamily CIW71_06445 PF01618 MotA/TolQ/ExbB proton channel family CIW71_06450 PF02472 Biopolymer transport protein ExbD/TolR CIW71_06460 PF07676 WD40-like Beta Propeller Repeat CIW71_06460 PF04052 TolB amino-terminal domain CIW71_06465 PF00691 OmpA family CIW71_06475 PF04055 Radical SAM superfamily CIW71_06485 PF06508 Queuosine biosynthesis protein QueC CIW71_06490 PF13581 Histidine kinase-like ATPase domain CIW71_06490 PF13426 PAS domain CIW71_06490 PF07536 HWE histidine kinase CIW71_06510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW71_06510 PF00672 HAMP domain CIW71_06510 PF02203 Tar ligand binding domain homologue CIW71_06545 PF00271 Helicase conserved C-terminal domain CIW71_06545 PF16124 RecQ zinc-binding CIW71_06545 PF09382 RQC domain CIW71_06545 PF00270 DEAD/DEAH box helicase CIW71_06545 PF00570 HRDC domain CIW71_06555 PF00210 Ferritin-like domain CIW71_06560 PF00270 DEAD/DEAH box helicase CIW71_06560 PF00271 Helicase conserved C-terminal domain CIW71_06560 PF04408 Helicase associated domain (HA2) CIW71_06560 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CIW71_06560 PF11898 Domain of unknown function (DUF3418) CIW71_06575 PF02685 Glucokinase CIW71_06590 PF13186 Iron-sulfur cluster-binding domain CIW71_06590 PF04055 Radical SAM superfamily CIW71_06595 PF05402 Coenzyme PQQ synthesis protein D (PqqD) CIW71_06600 PF03070 TENA/THI-4/PQQC family CIW71_06605 PF12706 Beta-lactamase superfamily domain CIW71_06610 PF08042 PqqA family CIW71_06615 PF13291 ACT domain CIW71_06615 PF04607 Region found in RelA / SpoT proteins CIW71_06615 PF02824 TGS domain CIW71_06630 PF00535 Glycosyl transferase family 2 CIW71_06635 PF00905 Penicillin binding protein transpeptidase domain CIW71_06635 PF14814 Bifunctional transglycosylase second domain CIW71_06635 PF00912 Transglycosylase CIW71_06645 PF04851 Type III restriction enzyme, res subunit CIW71_06645 PF13307 Helicase C-terminal domain CIW71_06650 PF00814 Glycoprotease family CIW71_06655 PF03747 ADP-ribosylglycohydrolase CIW71_06665 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CIW71_06665 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CIW71_06670 PF00072 Response regulator receiver domain CIW71_06675 PF00072 Response regulator receiver domain CIW71_06680 PF01584 CheW-like domain CIW71_06685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW71_06685 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CIW71_06690 PF01584 CheW-like domain CIW71_06690 PF01627 Hpt domain CIW71_06690 PF00072 Response regulator receiver domain CIW71_06690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_06705 PF13302 Acetyltransferase (GNAT) domain CIW71_06725 PF01112 Asparaginase CIW71_06730 PF03932 CutC family CIW71_06765 PF01301 Glycosyl hydrolases family 35 CIW71_06770 PF07971 Glycosyl hydrolase family 92 CIW71_06770 PF17678 Glycosyl hydrolase family 92 N-terminal domain CIW71_06815 PF07691 PA14 domain CIW71_06815 PF14310 Fibronectin type III-like domain CIW71_06815 PF00933 Glycosyl hydrolase family 3 N terminal domain CIW71_06815 PF01915 Glycosyl hydrolase family 3 C-terminal domain CIW71_06830 PF01476 LysM domain CIW71_06830 PF00704 Glycosyl hydrolases family 18 CIW71_06845 PF02685 Glucokinase CIW71_06850 PF04452 RNA methyltransferase CIW71_06855 PF00202 Aminotransferase class-III CIW71_06860 PF00293 NUDIX domain CIW71_06865 PF00459 Inositol monophosphatase family CIW71_06870 PF03819 MazG nucleotide pyrophosphohydrolase domain CIW71_06875 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CIW71_06890 PF08669 Glycine cleavage T-protein C-terminal barrel domain CIW71_06890 PF01571 Aminomethyltransferase folate-binding domain CIW71_06895 PF01597 Glycine cleavage H-protein CIW71_06925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CIW71_06925 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CIW71_06925 PF09317 Domain of unknown function (DUF1974) CIW71_06930 PF00561 alpha/beta hydrolase fold CIW71_06935 PF00440 Bacterial regulatory proteins, tetR family CIW71_06970 PF07715 TonB-dependent Receptor Plug Domain CIW71_06970 PF00593 TonB dependent receptor CIW71_06980 PF01430 Hsp33 protein CIW71_06985 PF00912 Transglycosylase CIW71_06990 PF00535 Glycosyl transferase family 2 CIW71_06995 PF00478 IMP dehydrogenase / GMP reductase domain CIW71_06995 PF00571 CBS domain CIW71_07000 PF05170 AsmA family CIW71_07005 PF03006 Haemolysin-III related CIW71_07010 PF16658 Class II release factor RF3, C-terminal domain CIW71_07010 PF00009 Elongation factor Tu GTP binding domain CIW71_07015 PF08525 Opacity-associated protein A N-terminal motif CIW71_07015 PF01551 Peptidase family M23 CIW71_07015 PF01476 LysM domain CIW71_07020 PF00561 alpha/beta hydrolase fold CIW71_07025 PF01053 Cys/Met metabolism PLP-dependent enzyme CIW71_07030 PF00696 Amino acid kinase family CIW71_07030 PF00742 Homoserine dehydrogenase CIW71_07030 PF03447 Homoserine dehydrogenase, NAD binding domain CIW71_07045 PF03315 Serine dehydratase beta chain CIW71_07045 PF03313 Serine dehydratase alpha chain CIW71_07065 PF04264 YceI-like domain CIW71_07070 PF00072 Response regulator receiver domain CIW71_07070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_07070 PF01627 Hpt domain CIW71_07070 PF00512 His Kinase A (phospho-acceptor) domain CIW71_07080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_07080 PF00672 HAMP domain CIW71_07080 PF00512 His Kinase A (phospho-acceptor) domain CIW71_07080 PF01627 Hpt domain CIW71_07080 PF00072 Response regulator receiver domain CIW71_07080 PF17149 Periplasmic sensor domain found in signal transduction proteins CIW71_07085 PF00672 HAMP domain CIW71_07085 PF17149 Periplasmic sensor domain found in signal transduction proteins CIW71_07085 PF00072 Response regulator receiver domain CIW71_07085 PF01627 Hpt domain CIW71_07085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_07085 PF00512 His Kinase A (phospho-acceptor) domain CIW71_07095 PF01208 Uroporphyrinogen decarboxylase (URO-D) CIW71_07105 PF01761 3-dehydroquinate synthase CIW71_07110 PF01202 Shikimate kinase CIW71_07115 PF01243 Pyridoxamine 5'-phosphate oxidase CIW71_07115 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CIW71_07125 PF04012 PspA/IM30 family CIW71_07150 PF03738 Glutathionylspermidine synthase preATP-grasp CIW71_07175 PF09278 MerR, DNA binding CIW71_07175 PF00376 MerR family regulatory protein CIW71_07225 PF04820 Tryptophan halogenase CIW71_07230 PF12706 Beta-lactamase superfamily domain CIW71_07270 PF00324 Amino acid permease CIW71_07275 PF00196 Bacterial regulatory proteins, luxR family CIW71_07285 PF00561 alpha/beta hydrolase fold CIW71_07315 PF00324 Amino acid permease CIW71_07325 PF01654 Cytochrome bd terminal oxidase subunit I CIW71_07330 PF02322 Cytochrome bd terminal oxidase subunit II CIW71_07340 PF00756 Putative esterase CIW71_07345 PF00571 CBS domain CIW71_07345 PF01769 Divalent cation transporter CIW71_07345 PF03448 MgtE intracellular N domain CIW71_07355 PF00391 PEP-utilising enzyme, mobile domain CIW71_07355 PF05524 PEP-utilising enzyme, N-terminal CIW71_07355 PF02896 PEP-utilising enzyme, TIM barrel domain CIW71_07360 PF00381 PTS HPr component phosphorylation site CIW71_07370 PF03668 P-loop ATPase protein family CIW71_07375 PF07475 HPr Serine kinase C-terminal domain CIW71_07375 PF02603 HPr Serine kinase N terminus CIW71_07380 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CIW71_07385 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CIW71_07390 PF04552 Sigma-54, DNA binding domain CIW71_07390 PF04963 Sigma-54 factor, core binding domain CIW71_07390 PF00309 Sigma-54 factor, Activator interacting domain (AID) CIW71_07395 PF00005 ABC transporter CIW71_07400 PF03968 OstA-like protein CIW71_07415 PF01380 SIS domain CIW71_07415 PF00571 CBS domain CIW71_07420 PF01722 BolA-like protein CIW71_07425 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CIW71_07445 PF00551 Formyl transferase CIW71_07460 PF00586 AIR synthase related protein, N-terminal domain CIW71_07460 PF02769 AIR synthase related protein, C-terminal domain CIW71_07470 PF01594 AI-2E family transporter CIW71_07475 PF00308 Bacterial dnaA protein CIW71_07480 PF00483 Nucleotidyl transferase CIW71_07485 PF01636 Phosphotransferase enzyme family CIW71_07515 PF00175 Oxidoreductase NAD-binding domain CIW71_07515 PF00258 Flavodoxin CIW71_07515 PF00667 FAD binding domain CIW71_07520 PF02424 ApbE family CIW71_07545 PF13640 2OG-Fe(II) oxygenase superfamily CIW71_07545 PF18331 PKHD-type hydroxylase C-terminal domain CIW71_07555 PF05598 Transposase domain (DUF772) CIW71_07565 PF00355 Rieske [2Fe-2S] domain CIW71_07575 PF00266 Aminotransferase class-V CIW71_07580 PF01458 Uncharacterized protein family (UPF0051) CIW71_07585 PF00005 ABC transporter CIW71_07590 PF01458 Uncharacterized protein family (UPF0051) CIW71_07595 PF02082 Transcriptional regulator CIW71_07605 PF01965 DJ-1/PfpI family CIW71_07625 PF01551 Peptidase family M23 CIW71_07635 PF03807 NADP oxidoreductase coenzyme F420-dependent CIW71_07635 PF14748 Pyrroline-5-carboxylate reductase dimerisation CIW71_07640 PF01168 Alanine racemase, N-terminal domain CIW71_07645 PF00437 Type II/IV secretion system protein CIW71_07650 PF00437 Type II/IV secretion system protein CIW71_07665 PF13302 Acetyltransferase (GNAT) domain CIW71_07665 PF03352 Methyladenine glycosylase CIW71_07665 PF00117 Glutamine amidotransferase class-I CIW71_07665 PF00958 GMP synthase C terminal domain CIW71_07665 PF13673 Acetyltransferase (GNAT) domain CIW71_07675 PF02622 Uncharacterized ACR, COG1678 CIW71_07680 PF03652 Holliday junction resolvase CIW71_07685 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CIW71_07685 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CIW71_07690 PF02566 OsmC-like protein CIW71_07700 PF02567 Phenazine biosynthesis-like protein CIW71_07705 PF02567 Phenazine biosynthesis-like protein CIW71_07710 PF00696 Amino acid kinase family CIW71_07710 PF01842 ACT domain CIW71_07725 PF02875 Mur ligase family, glutamate ligase domain CIW71_07725 PF08245 Mur ligase middle domain CIW71_07740 PF00348 Polyprenyl synthetase CIW71_07745 PF00436 Single-strand binding protein family CIW71_07755 PF08240 Alcohol dehydrogenase GroES-like domain CIW71_07755 PF14765 Polyketide synthase dehydratase CIW71_07755 PF00698 Acyl transferase domain CIW71_07755 PF08659 KR domain CIW71_07755 PF00550 Phosphopantetheine attachment site CIW71_07755 PF00107 Zinc-binding dehydrogenase CIW71_07755 PF16197 Ketoacyl-synthetase C-terminal extension CIW71_07755 PF00109 Beta-ketoacyl synthase, N-terminal domain CIW71_07755 PF02801 Beta-ketoacyl synthase, C-terminal domain CIW71_07760 PF10518 TAT (twin-arginine translocation) pathway signal sequence CIW71_07760 PF01799 [2Fe-2S] binding domain CIW71_07760 PF00111 2Fe-2S iron-sulfur cluster binding domain CIW71_07765 PF03450 CO dehydrogenase flavoprotein C-terminal domain CIW71_07765 PF00941 FAD binding domain in molybdopterin dehydrogenase CIW71_07770 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CIW71_07770 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CIW71_07775 PF13478 XdhC Rossmann domain CIW71_07775 PF02625 XdhC and CoxI family CIW71_07820 PF04328 Selenoprotein, putative CIW71_07825 PF13722 5TM C-terminal transporter carbon starvation CstA CIW71_07825 PF02554 Carbon starvation protein CstA CIW71_07830 PF05726 Pirin C-terminal cupin domain CIW71_07830 PF02678 Pirin CIW71_07845 PF02678 Pirin CIW71_07845 PF05726 Pirin C-terminal cupin domain CIW71_07855 PF04493 Endonuclease V CIW71_07860 PF00300 Histidine phosphatase superfamily (branch 1) CIW71_07870 PF01431 Peptidase family M13 CIW71_07870 PF05649 Peptidase family M13 CIW71_07875 PF13091 PLD-like domain CIW71_07880 PF01339 CheB methylesterase CIW71_07880 PF00072 Response regulator receiver domain CIW71_07885 PF03705 CheR methyltransferase, all-alpha domain CIW71_07885 PF01739 CheR methyltransferase, SAM binding domain CIW71_07890 PF00563 EAL domain CIW71_07890 PF13426 PAS domain CIW71_07890 PF00990 Diguanylate cyclase, GGDEF domain CIW71_07895 PF01584 CheW-like domain CIW71_07900 PF00672 HAMP domain CIW71_07900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW71_07900 PF02203 Tar ligand binding domain homologue CIW71_07905 PF01627 Hpt domain CIW71_07905 PF02895 Signal transducing histidine kinase, homodimeric domain CIW71_07905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_07905 PF09078 CheY binding CIW71_07905 PF01584 CheW-like domain CIW71_07940 PF00270 DEAD/DEAH box helicase CIW71_07940 PF00271 Helicase conserved C-terminal domain CIW71_07940 PF17757 UvrB interaction domain CIW71_07940 PF03461 TRCF domain CIW71_07940 PF02559 CarD-like/TRCF domain CIW71_07950 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CIW71_07955 PF00486 Transcriptional regulatory protein, C terminal CIW71_07955 PF00072 Response regulator receiver domain CIW71_07960 PF00512 His Kinase A (phospho-acceptor) domain CIW71_07960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_07960 PF00672 HAMP domain CIW71_07975 PF06123 Inner membrane protein CreD CIW71_08000 PF00749 tRNA synthetases class I (E and Q), catalytic domain CIW71_08005 PF01475 Ferric uptake regulator family CIW71_08015 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CIW71_08015 PF00529 HlyD membrane-fusion protein of T1SS CIW71_08020 PF00873 AcrB/AcrD/AcrF family CIW71_08025 PF02321 Outer membrane efflux protein CIW71_08030 PF16859 Tetracyclin repressor-like, C-terminal domain CIW71_08030 PF00440 Bacterial regulatory proteins, tetR family CIW71_08035 PF00248 Aldo/keto reductase family CIW71_08040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW71_08040 PF03466 LysR substrate binding domain CIW71_08050 PF12833 Helix-turn-helix domain CIW71_08050 PF06719 AraC-type transcriptional regulator N-terminus CIW71_08060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW71_08060 PF03466 LysR substrate binding domain CIW71_08065 PF07690 Major Facilitator Superfamily CIW71_08080 PF00082 Subtilase family CIW71_08080 PF01483 Proprotein convertase P-domain CIW71_08100 PF07715 TonB-dependent Receptor Plug Domain CIW71_08100 PF00593 TonB dependent receptor CIW71_08120 PF08240 Alcohol dehydrogenase GroES-like domain CIW71_08120 PF00107 Zinc-binding dehydrogenase CIW71_08125 PF00654 Voltage gated chloride channel CIW71_08135 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CIW71_08135 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CIW71_08185 PF00271 Helicase conserved C-terminal domain CIW71_08185 PF03880 DbpA RNA binding domain CIW71_08185 PF00270 DEAD/DEAH box helicase CIW71_08190 PF00990 Diguanylate cyclase, GGDEF domain CIW71_08190 PF08448 PAS fold CIW71_08190 PF00563 EAL domain CIW71_08195 PF00849 RNA pseudouridylate synthase CIW71_08195 PF01479 S4 domain CIW71_08200 PF00072 Response regulator receiver domain CIW71_08200 PF00990 Diguanylate cyclase, GGDEF domain CIW71_08220 PF03737 Aldolase/RraA CIW71_08225 PF00144 Beta-lactamase CIW71_08230 PF00999 Sodium/hydrogen exchanger family CIW71_08240 PF00072 Response regulator receiver domain CIW71_08240 PF00486 Transcriptional regulatory protein, C terminal CIW71_08245 PF02321 Outer membrane efflux protein CIW71_08260 PF00873 AcrB/AcrD/AcrF family CIW71_08275 PF00005 ABC transporter CIW71_08275 PF00664 ABC transporter transmembrane region CIW71_08320 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CIW71_08325 PF04070 Domain of unknown function (DUF378) CIW71_08360 PF00085 Thioredoxin CIW71_08370 PF13603 Leucyl-tRNA synthetase, Domain 2 CIW71_08370 PF08264 Anticodon-binding domain of tRNA CIW71_08370 PF00133 tRNA synthetases class I (I, L, M and V) CIW71_08385 PF01467 Cytidylyltransferase-like CIW71_08400 PF02590 Predicted SPOUT methyltransferase CIW71_08415 PF04402 Protein of unknown function (DUF541) CIW71_08420 PF02545 Maf-like protein CIW71_08425 PF10150 Ribonuclease E/G family CIW71_08425 PF00575 S1 RNA binding domain CIW71_08430 PF13502 AsmA-like C-terminal region CIW71_08430 PF13116 Protein of unknown function CIW71_08440 PF01523 Putative modulator of DNA gyrase CIW71_08445 PF04751 Protein of unknown function (DUF615) CIW71_08450 PF01523 Putative modulator of DNA gyrase CIW71_08460 PF14521 Lysine-specific metallo-endopeptidase CIW71_08470 PF00348 Polyprenyl synthetase CIW71_08475 PF02609 Exonuclease VII small subunit CIW71_08480 PF01171 PP-loop family CIW71_08480 PF11734 TilS substrate C-terminal domain CIW71_08480 PF09179 TilS substrate binding domain CIW71_08490 PF00245 Alkaline phosphatase CIW71_08495 PF00375 Sodium:dicarboxylate symporter family CIW71_08510 PF00877 NlpC/P60 family CIW71_08515 PF00877 NlpC/P60 family CIW71_08520 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CIW71_08525 PF04235 Protein of unknown function (DUF418) CIW71_08530 PF01266 FAD dependent oxidoreductase CIW71_08535 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CIW71_08535 PF07992 Pyridine nucleotide-disulphide oxidoreductase CIW71_08540 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CIW71_08555 PF05649 Peptidase family M13 CIW71_08555 PF01431 Peptidase family M13 CIW71_08565 PF05649 Peptidase family M13 CIW71_08565 PF01431 Peptidase family M13 CIW71_08580 PF00593 TonB dependent receptor CIW71_08580 PF07715 TonB-dependent Receptor Plug Domain CIW71_08585 PF10609 NUBPL iron-transfer P-loop NTPase CIW71_08595 PF00692 dUTPase CIW71_08615 PF01738 Dienelactone hydrolase family CIW71_08640 PF00082 Subtilase family CIW71_08645 PF17862 AAA+ lid domain CIW71_08645 PF06480 FtsH Extracellular CIW71_08645 PF01434 Peptidase family M41 CIW71_08645 PF00004 ATPase family associated with various cellular activities (AAA) CIW71_08655 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CIW71_08665 PF04055 Radical SAM superfamily CIW71_08665 PF00919 Uncharacterized protein family UPF0004 CIW71_08665 PF18693 TRAM domain CIW71_08670 PF01272 Transcription elongation factor, GreA/GreB, C-term CIW71_08670 PF03449 Transcription elongation factor, N-terminal CIW71_08690 PF00293 NUDIX domain CIW71_08715 PF02666 Phosphatidylserine decarboxylase CIW71_08720 PF02630 SCO1/SenC CIW71_08725 PF05175 Methyltransferase small domain CIW71_08730 PF01264 Chorismate synthase CIW71_08735 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CIW71_08735 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CIW71_08740 PF01118 Semialdehyde dehydrogenase, NAD binding domain CIW71_08740 PF02774 Semialdehyde dehydrogenase, dimerisation domain CIW71_08760 PF01416 tRNA pseudouridine synthase CIW71_08765 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CIW71_08770 PF03466 LysR substrate binding domain CIW71_08770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW71_08775 PF00291 Pyridoxal-phosphate dependent enzyme CIW71_08785 PF00290 Tryptophan synthase alpha chain CIW71_08790 PF17848 Acetyl-coA carboxylase zinc finger domain CIW71_08790 PF01039 Carboxyl transferase domain CIW71_08795 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CIW71_08795 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CIW71_08795 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CIW71_08795 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CIW71_08810 PF00990 Diguanylate cyclase, GGDEF domain CIW71_08810 PF00563 EAL domain CIW71_08810 PF03707 Bacterial signalling protein N terminal repeat CIW71_08825 PF00106 short chain dehydrogenase CIW71_08830 PF00121 Triosephosphate isomerase CIW71_08845 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CIW71_08850 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CIW71_08855 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CIW71_08860 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CIW71_08870 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CIW71_08870 PF10531 SLBB domain CIW71_08870 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CIW71_08875 PF00384 Molybdopterin oxidoreductase CIW71_08875 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CIW71_08875 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal CIW71_08880 PF00146 NADH dehydrogenase CIW71_08885 PF12838 4Fe-4S dicluster domain CIW71_08890 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CIW71_08895 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CIW71_08900 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CIW71_08900 PF00361 Proton-conducting membrane transporter CIW71_08905 PF00361 Proton-conducting membrane transporter CIW71_08905 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus CIW71_08910 PF00361 Proton-conducting membrane transporter CIW71_08920 PF02576 RimP N-terminal domain CIW71_08920 PF17384 RimP C-terminal SH3 domain CIW71_08925 PF13184 NusA-like KH domain CIW71_08925 PF00575 S1 RNA binding domain CIW71_08925 PF08529 NusA N-terminal domain CIW71_08930 PF04760 Translation initiation factor IF-2, N-terminal region CIW71_08930 PF08364 Bacterial translation initiation factor IF-2 associated region CIW71_08930 PF11987 Translation-initiation factor 2 CIW71_08930 PF00009 Elongation factor Tu GTP binding domain CIW71_08935 PF02033 Ribosome-binding factor A CIW71_08940 PF09157 Pseudouridine synthase II TruB, C-terminal CIW71_08940 PF16198 tRNA pseudouridylate synthase B C-terminal domain CIW71_08940 PF01509 TruB family pseudouridylate synthase (N terminal domain) CIW71_08945 PF00312 Ribosomal protein S15 CIW71_08950 PF01138 3' exoribonuclease family, domain 1 CIW71_08950 PF03725 3' exoribonuclease family, domain 2 CIW71_08950 PF00575 S1 RNA binding domain CIW71_08950 PF00013 KH domain CIW71_08950 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CIW71_08960 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CIW71_08960 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CIW71_08970 PF00731 AIR carboxylase CIW71_08975 PF02222 ATP-grasp domain CIW71_08975 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CIW71_08980 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CIW71_08980 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CIW71_08985 PF00462 Glutaredoxin CIW71_08995 PF01914 MarC family integral membrane protein CIW71_09005 PF00593 TonB dependent receptor CIW71_09010 PF11892 Domain of unknown function (DUF3412) CIW71_09010 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases CIW71_09010 PF03641 Possible lysine decarboxylase CIW71_09015 PF00114 Pilin (bacterial filament) CIW71_09015 PF07963 Prokaryotic N-terminal methylation motif CIW71_09055 PF00271 Helicase conserved C-terminal domain CIW71_09055 PF04851 Type III restriction enzyme, res subunit CIW71_09055 PF17757 UvrB interaction domain CIW71_09055 PF02151 UvrB/uvrC motif CIW71_09055 PF12344 Ultra-violet resistance protein B CIW71_09070 PF02534 Type IV secretory system Conjugative DNA transfer CIW71_09090 PF03743 Bacterial conjugation TrbI-like protein CIW71_09095 PF00437 Type II/IV secretion system protein CIW71_09100 PF01464 Transglycosylase SLT domain CIW71_09110 PF05101 Type IV secretory pathway, VirB3-like protein CIW71_09115 PF03135 CagE, TrbE, VirB family, component of type IV transporter system CIW71_09180 PF10566 Glycoside hydrolase 97 CIW71_09180 PF14508 Glycosyl-hydrolase 97 N-terminal CIW71_09180 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation CIW71_09190 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CIW71_09195 PF00686 Starch binding domain CIW71_09195 PF00128 Alpha amylase, catalytic domain CIW71_09200 PF00356 Bacterial regulatory proteins, lacI family CIW71_09205 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CIW71_09205 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CIW71_09205 PF03129 Anticodon binding domain CIW71_09205 PF02824 TGS domain CIW71_09210 PF05198 Translation initiation factor IF-3, N-terminal domain CIW71_09210 PF00707 Translation initiation factor IF-3, C-terminal domain CIW71_09215 PF01632 Ribosomal protein L35 CIW71_09220 PF00453 Ribosomal protein L20 CIW71_09225 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CIW71_09225 PF01409 tRNA synthetases class II core domain (F) CIW71_09230 PF03147 Ferredoxin-fold anticodon binding domain CIW71_09230 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CIW71_09230 PF03484 tRNA synthetase B5 domain CIW71_09230 PF03483 B3/4 domain CIW71_09230 PF01588 Putative tRNA binding domain CIW71_09235 PF00216 Bacterial DNA-binding protein CIW71_09240 PF13411 MerR HTH family regulatory protein CIW71_09260 PF02397 Bacterial sugar transferase CIW71_09280 PF00534 Glycosyl transferases group 1 CIW71_09280 PF13439 Glycosyltransferase Family 4 CIW71_09290 PF14667 Polysaccharide biosynthesis C-terminal domain CIW71_09305 PF03808 Glycosyl transferase WecB/TagA/CpsF family CIW71_09320 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CIW71_09320 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CIW71_09325 PF00753 Metallo-beta-lactamase superfamily CIW71_09325 PF16123 Hydroxyacylglutathione hydrolase C-terminus CIW71_09330 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family CIW71_09350 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CIW71_09350 PF02779 Transketolase, pyrimidine binding domain CIW71_09350 PF02780 Transketolase, C-terminal domain CIW71_09360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CIW71_09360 PF12806 Acetyl-CoA dehydrogenase C-terminal like CIW71_09360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CIW71_09360 PF02770 Acyl-CoA dehydrogenase, middle domain CIW71_09375 PF08212 Lipocalin-like domain CIW71_09410 PF13426 PAS domain CIW71_09410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_09410 PF00072 Response regulator receiver domain CIW71_09415 PF04362 Bacterial Fe(2+) trafficking CIW71_09420 PF00730 HhH-GPD superfamily base excision DNA repair protein CIW71_09420 PF00633 Helix-hairpin-helix motif CIW71_09420 PF14815 NUDIX domain CIW71_09420 PF10576 Iron-sulfur binding domain of endonuclease III CIW71_09430 PF00448 SRP54-type protein, GTPase domain CIW71_09430 PF02881 SRP54-type protein, helical bundle domain CIW71_09440 PF05544 Proline racemase CIW71_09445 PF01266 FAD dependent oxidoreductase CIW71_09455 PF04324 BFD-like [2Fe-2S] binding domain CIW71_09455 PF07992 Pyridine nucleotide-disulphide oxidoreductase CIW71_09460 PF00701 Dihydrodipicolinate synthetase family CIW71_09465 PF00171 Aldehyde dehydrogenase family CIW71_09470 PF01321 Creatinase/Prolidase N-terminal domain CIW71_09470 PF00557 Metallopeptidase family M24 CIW71_09485 PF13520 Amino acid permease CIW71_09515 PF00082 Subtilase family CIW71_09515 PF09286 Pro-kumamolisin, activation domain CIW71_09525 PF07715 TonB-dependent Receptor Plug Domain CIW71_09525 PF00593 TonB dependent receptor CIW71_09535 PF07532 Bacterial Ig-like domain (group 4) CIW71_09540 PF04616 Glycosyl hydrolases family 43 CIW71_09550 PF07715 TonB-dependent Receptor Plug Domain CIW71_09550 PF00593 TonB dependent receptor CIW71_09585 PF00183 Hsp90 protein CIW71_09585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_09595 PF01467 Cytidylyltransferase-like CIW71_09610 PF00037 4Fe-4S binding domain CIW71_09620 PF00759 Glycosyl hydrolase family 9 CIW71_09620 PF02927 Cellulase N-terminal ig-like domain CIW71_09675 PF02547 Queuosine biosynthesis protein CIW71_09680 PF01702 Queuine tRNA-ribosyltransferase CIW71_09685 PF02699 Preprotein translocase subunit CIW71_09690 PF02355 Protein export membrane protein CIW71_09690 PF13721 SecD export protein N-terminal TM region CIW71_09690 PF07549 SecD/SecF GG Motif CIW71_09695 PF07549 SecD/SecF GG Motif CIW71_09695 PF02355 Protein export membrane protein CIW71_09725 PF01695 IstB-like ATP binding protein CIW71_09730 PF02796 Helix-turn-helix domain of resolvase CIW71_09730 PF00665 Integrase core domain CIW71_09755 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CIW71_09760 PF00294 pfkB family carbohydrate kinase CIW71_09765 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CIW71_09765 PF05524 PEP-utilising enzyme, N-terminal CIW71_09765 PF00381 PTS HPr component phosphorylation site CIW71_09765 PF00391 PEP-utilising enzyme, mobile domain CIW71_09765 PF02896 PEP-utilising enzyme, TIM barrel domain CIW71_09770 PF00356 Bacterial regulatory proteins, lacI family CIW71_09775 PF00873 AcrB/AcrD/AcrF family CIW71_09780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CIW71_09780 PF00529 HlyD membrane-fusion protein of T1SS CIW71_09790 PF05088 Bacterial NAD-glutamate dehydrogenase CIW71_09800 PF05598 Transposase domain (DUF772) CIW71_09805 PF07690 Major Facilitator Superfamily CIW71_09810 PF00072 Response regulator receiver domain CIW71_09815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_09815 PF01627 Hpt domain CIW71_09815 PF00072 Response regulator receiver domain CIW71_09815 PF00512 His Kinase A (phospho-acceptor) domain CIW71_09815 PF00672 HAMP domain CIW71_09815 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CIW71_09820 PF04286 Protein of unknown function (DUF445) CIW71_09830 PF00202 Aminotransferase class-III CIW71_09845 PF07690 Major Facilitator Superfamily CIW71_09850 PF02634 FdhD/NarQ family CIW71_09855 PF00384 Molybdopterin oxidoreductase CIW71_09865 PF00083 Sugar (and other) transporter CIW71_09865 PF07690 Major Facilitator Superfamily CIW71_09870 PF01814 Hemerythrin HHE cation binding domain CIW71_09875 PF00990 Diguanylate cyclase, GGDEF domain CIW71_09875 PF00072 Response regulator receiver domain CIW71_09880 PF01266 FAD dependent oxidoreductase CIW71_09885 PF00120 Glutamine synthetase, catalytic domain CIW71_09890 PF07722 Peptidase C26 CIW71_09895 PF00120 Glutamine synthetase, catalytic domain CIW71_09900 PF00202 Aminotransferase class-III CIW71_09905 PF13416 Bacterial extracellular solute-binding protein CIW71_09910 PF13533 Biotin-lipoyl like CIW71_09915 PF07690 Major Facilitator Superfamily CIW71_09920 PF02321 Outer membrane efflux protein CIW71_09925 PF00005 ABC transporter CIW71_09925 PF08402 TOBE domain CIW71_09930 PF00528 Binding-protein-dependent transport system inner membrane component CIW71_09935 PF00528 Binding-protein-dependent transport system inner membrane component CIW71_09940 PF00171 Aldehyde dehydrogenase family CIW71_09955 PF03471 Transporter associated domain CIW71_09955 PF00571 CBS domain CIW71_09965 PF02130 Uncharacterized protein family UPF0054 CIW71_09975 PF02562 PhoH-like protein CIW71_09980 PF04055 Radical SAM superfamily CIW71_09980 PF01938 TRAM domain CIW71_09980 PF00919 Uncharacterized protein family UPF0004 CIW71_09995 PF01464 Transglycosylase SLT domain CIW71_10005 PF00355 Rieske [2Fe-2S] domain CIW71_10005 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CIW71_10010 PF00032 Cytochrome b(C-terminal)/b6/petD CIW71_10010 PF00033 Cytochrome b/b6/petB CIW71_10015 PF02167 Cytochrome C1 family CIW71_10020 PF00043 Glutathione S-transferase, C-terminal domain CIW71_10020 PF02798 Glutathione S-transferase, N-terminal domain CIW71_10025 PF04386 Stringent starvation protein B CIW71_10045 PF00270 DEAD/DEAH box helicase CIW71_10045 PF08494 DEAD/H associated CIW71_10045 PF00271 Helicase conserved C-terminal domain CIW71_10050 PF02245 Methylpurine-DNA glycosylase (MPG) CIW71_10055 PF02743 Cache domain CIW71_10055 PF00672 HAMP domain CIW71_10055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW71_10060 PF01584 CheW-like domain CIW71_10095 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CIW71_10095 PF00171 Aldehyde dehydrogenase family CIW71_10095 PF14850 DNA-binding domain of Proline dehydrogenase CIW71_10095 PF01619 Proline dehydrogenase CIW71_10160 PF00589 Phage integrase family CIW71_10180 PF04679 ATP dependent DNA ligase C terminal region CIW71_10180 PF01068 ATP dependent DNA ligase domain CIW71_10180 PF13298 DNA polymerase Ligase (LigD) CIW71_10185 PF00570 HRDC domain CIW71_10185 PF01612 3'-5' exonuclease CIW71_10200 PF03781 Sulfatase-modifying factor enzyme 1 CIW71_10210 PF02601 Exonuclease VII, large subunit CIW71_10210 PF13742 OB-fold nucleic acid binding domain CIW71_10215 PF08331 Domain of unknown function (DUF1730) CIW71_10220 PF01256 Carbohydrate kinase CIW71_10220 PF03853 YjeF-related protein N-terminus CIW71_10225 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CIW71_10230 PF01520 N-acetylmuramoyl-L-alanine amidase CIW71_10230 PF11741 AMIN domain CIW71_10235 PF01119 DNA mismatch repair protein, C-terminal domain CIW71_10235 PF08676 MutL C terminal dimerisation domain CIW71_10255 PF05233 PHB accumulation regulatory domain CIW71_10255 PF07879 PHB/PHA accumulation regulator DNA-binding domain CIW71_10260 PF00106 short chain dehydrogenase CIW71_10265 PF00749 tRNA synthetases class I (E and Q), catalytic domain CIW71_10270 PF01435 Peptidase family M48 CIW71_10275 PF00072 Response regulator receiver domain CIW71_10275 PF00990 Diguanylate cyclase, GGDEF domain CIW71_10275 PF00563 EAL domain CIW71_10285 PF07152 YaeQ protein CIW71_10290 PF00313 'Cold-shock' DNA-binding domain CIW71_10295 PF14497 Glutathione S-transferase, C-terminal domain CIW71_10295 PF02798 Glutathione S-transferase, N-terminal domain CIW71_10300 PF00135 Carboxylesterase family CIW71_10305 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CIW71_10310 PF00156 Phosphoribosyl transferase domain CIW71_10315 PF00271 Helicase conserved C-terminal domain CIW71_10315 PF00270 DEAD/DEAH box helicase CIW71_10315 PF03880 DbpA RNA binding domain CIW71_10335 PF00545 ribonuclease CIW71_10340 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CIW71_10340 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CIW71_10345 PF00459 Inositol monophosphatase family CIW71_10350 PF00588 SpoU rRNA Methylase family CIW71_10360 PF13188 PAS domain CIW71_10360 PF03707 Bacterial signalling protein N terminal repeat CIW71_10360 PF00563 EAL domain CIW71_10360 PF00990 Diguanylate cyclase, GGDEF domain CIW71_10365 PF04055 Radical SAM superfamily CIW71_10370 PF01132 Elongation factor P (EF-P) OB domain CIW71_10370 PF09285 Elongation factor P, C-terminal CIW71_10370 PF08207 Elongation factor P (EF-P) KOW-like domain CIW71_10380 PF01979 Amidohydrolase family CIW71_10390 PF13419 Haloacid dehalogenase-like hydrolase CIW71_10400 PF00295 Glycosyl hydrolases family 28 CIW71_10440 PF00753 Metallo-beta-lactamase superfamily CIW71_10450 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CIW71_10455 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CIW71_10475 PF08460 Bacterial SH3 domain CIW71_10475 PF01551 Peptidase family M23 CIW71_10480 PF01979 Amidohydrolase family CIW71_10485 PF01809 Putative membrane protein insertion efficiency factor CIW71_10490 PF01258 Prokaryotic dksA/traR C4-type zinc finger CIW71_10500 PF02657 Fe-S metabolism associated domain CIW71_10505 PF09190 DALR domain CIW71_10505 PF01406 tRNA synthetases class I (C) catalytic domain CIW71_10515 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CIW71_10515 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CIW71_10520 PF00764 Arginosuccinate synthase CIW71_10535 PF00696 Amino acid kinase family CIW71_10535 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase CIW71_10545 PF01118 Semialdehyde dehydrogenase, NAD binding domain CIW71_10550 PF00206 Lyase CIW71_10560 PF01472 PUA domain CIW71_10560 PF00696 Amino acid kinase family CIW71_10565 PF00171 Aldehyde dehydrogenase family CIW71_10575 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CIW71_10575 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CIW71_10595 PF02322 Cytochrome bd terminal oxidase subunit II CIW71_10600 PF01654 Cytochrome bd terminal oxidase subunit I CIW71_10605 PF00005 ABC transporter CIW71_10605 PF00664 ABC transporter transmembrane region CIW71_10610 PF00005 ABC transporter CIW71_10610 PF00664 ABC transporter transmembrane region CIW71_10615 PF00313 'Cold-shock' DNA-binding domain CIW71_10620 PF00561 alpha/beta hydrolase fold CIW71_10630 PF03918 Cytochrome C biogenesis protein CIW71_10635 PF08534 Redoxin CIW71_10640 PF01578 Cytochrome C assembly protein CIW71_10640 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CIW71_10645 PF03100 CcmE CIW71_10655 PF01578 Cytochrome C assembly protein CIW71_10660 PF03379 CcmB protein CIW71_10665 PF00005 ABC transporter CIW71_10670 PF00155 Aminotransferase class I and II CIW71_10675 PF00795 Carbon-nitrogen hydrolase CIW71_10690 PF01479 S4 domain CIW71_10690 PF00849 RNA pseudouridylate synthase CIW71_10695 PF04079 Segregation and condensation complex subunit ScpB CIW71_10700 PF02616 Segregation and condensation protein ScpA CIW71_10705 PF03795 YCII-related domain CIW71_10715 PF00356 Bacterial regulatory proteins, lacI family CIW71_10735 PF00528 Binding-protein-dependent transport system inner membrane component CIW71_10740 PF00528 Binding-protein-dependent transport system inner membrane component CIW71_10765 PF00795 Carbon-nitrogen hydrolase CIW71_10770 PF04371 Porphyromonas-type peptidyl-arginine deiminase CIW71_10785 PF00444 Ribosomal protein L36 CIW71_10790 PF02224 Cytidylate kinase CIW71_10795 PF00575 S1 RNA binding domain CIW71_10800 PF00216 Bacterial DNA-binding protein CIW71_10810 PF18073 Rubredoxin metal binding domain CIW71_10815 PF00953 Glycosyl transferase family 4 CIW71_10820 PF02719 Polysaccharide biosynthesis protein CIW71_10825 PF00483 Nucleotidyl transferase CIW71_10830 PF02254 TrkA-N domain CIW71_10830 PF00999 Sodium/hydrogen exchanger family CIW71_10840 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CIW71_10840 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CIW71_10845 PF00571 CBS domain CIW71_10845 PF00478 IMP dehydrogenase / GMP reductase domain CIW71_10850 PF00117 Glutamine amidotransferase class-I CIW71_10850 PF02540 NAD synthase CIW71_10850 PF00958 GMP synthase C terminal domain CIW71_10855 PF13356 Arm DNA-binding domain CIW71_10855 PF00589 Phage integrase family CIW71_10895 PF08240 Alcohol dehydrogenase GroES-like domain CIW71_10895 PF00107 Zinc-binding dehydrogenase CIW71_10905 PF00248 Aldo/keto reductase family CIW71_10925 PF02534 Type IV secretory system Conjugative DNA transfer CIW71_10950 PF03135 CagE, TrbE, VirB family, component of type IV transporter system CIW71_10965 PF04610 TrbL/VirB6 plasmid conjugal transfer protein CIW71_10975 PF03524 Conjugal transfer protein CIW71_10980 PF03743 Bacterial conjugation TrbI-like protein CIW71_10990 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) CIW71_10995 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus CIW71_10995 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CIW71_10995 PF00361 Proton-conducting membrane transporter CIW71_11000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW71_11000 PF03466 LysR substrate binding domain CIW71_11020 PF00072 Response regulator receiver domain CIW71_11020 PF00196 Bacterial regulatory proteins, luxR family CIW71_11035 PF00857 Isochorismatase family CIW71_11045 PF00929 Exonuclease CIW71_11050 PF14437 MafB19-like deaminase CIW71_11055 PF01325 Iron dependent repressor, N-terminal DNA binding domain CIW71_11055 PF02742 Iron dependent repressor, metal binding and dimerisation domain CIW71_11060 PF01566 Natural resistance-associated macrophage protein CIW71_11065 PF00561 alpha/beta hydrolase fold CIW71_11080 PF05977 Transmembrane secretion effector CIW71_11085 PF07969 Amidohydrolase family CIW71_11090 PF05552 Conserved TM helix CIW71_11090 PF00924 Mechanosensitive ion channel CIW71_11095 PF02896 PEP-utilising enzyme, TIM barrel domain CIW71_11095 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CIW71_11095 PF00391 PEP-utilising enzyme, mobile domain CIW71_11100 PF03618 Kinase/pyrophosphorylase CIW71_11120 PF01066 CDP-alcohol phosphatidyltransferase CIW71_11130 PF00561 alpha/beta hydrolase fold CIW71_11145 PF01266 FAD dependent oxidoreductase CIW71_11145 PF00355 Rieske [2Fe-2S] domain CIW71_11155 PF17674 HHH domain CIW71_11155 PF00575 S1 RNA binding domain CIW71_11155 PF16921 Tex protein YqgF-like domain CIW71_11155 PF09371 Tex-like protein N-terminal domain CIW71_11165 PF00512 His Kinase A (phospho-acceptor) domain CIW71_11165 PF09308 LuxQ, periplasmic CIW71_11165 PF00072 Response regulator receiver domain CIW71_11165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_11210 PF00034 Cytochrome c CIW71_11220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CIW71_11225 PF00873 AcrB/AcrD/AcrF family CIW71_11250 PF01081 KDPG and KHG aldolase CIW71_11255 PF00920 Dehydratase family CIW71_11260 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CIW71_11265 PF02685 Glucokinase CIW71_11270 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CIW71_11270 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CIW71_11275 PF17912 MalK OB fold domain CIW71_11275 PF00005 ABC transporter CIW71_11290 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CIW71_11295 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CIW71_11300 PF02910 Fumarate reductase flavoprotein C-term CIW71_11300 PF00890 FAD binding domain CIW71_11310 PF13085 2Fe-2S iron-sulfur cluster binding domain CIW71_11315 PF03937 Flavinator of succinate dehydrogenase CIW71_11325 PF12704 MacB-like periplasmic core domain CIW71_11325 PF02687 FtsX-like permease family CIW71_11330 PF00005 ABC transporter CIW71_11340 PF00753 Metallo-beta-lactamase superfamily CIW71_11340 PF03772 Competence protein CIW71_11345 PF01618 MotA/TolQ/ExbB proton channel family CIW71_11355 PF00005 ABC transporter CIW71_11355 PF00664 ABC transporter transmembrane region CIW71_11360 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CIW71_11365 PF02348 Cytidylyltransferase CIW71_11370 PF01451 Low molecular weight phosphotyrosine protein phosphatase CIW71_11380 PF08459 UvrC Helix-hairpin-helix N-terminal CIW71_11380 PF02151 UvrB/uvrC motif CIW71_11380 PF01541 GIY-YIG catalytic domain CIW71_11385 PF01066 CDP-alcohol phosphatidyltransferase CIW71_11405 PF00589 Phage integrase family CIW71_11405 PF13356 Arm DNA-binding domain CIW71_11410 PF00665 Integrase core domain CIW71_11410 PF02796 Helix-turn-helix domain of resolvase CIW71_11415 PF01695 IstB-like ATP binding protein CIW71_11430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW71_11430 PF03466 LysR substrate binding domain CIW71_11455 PF00665 Integrase core domain CIW71_11455 PF02796 Helix-turn-helix domain of resolvase CIW71_11460 PF01695 IstB-like ATP binding protein CIW71_11470 PF11398 Protein of unknown function (DUF2813) CIW71_11525 PF04610 TrbL/VirB6 plasmid conjugal transfer protein CIW71_11605 PF07690 Major Facilitator Superfamily CIW71_11615 PF09297 NADH pyrophosphatase zinc ribbon domain CIW71_11615 PF00293 NUDIX domain CIW71_11620 PF00132 Bacterial transferase hexapeptide (six repeats) CIW71_11635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CIW71_11635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CIW71_11635 PF02770 Acyl-CoA dehydrogenase, middle domain CIW71_11650 PF07690 Major Facilitator Superfamily CIW71_11655 PF03466 LysR substrate binding domain CIW71_11655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW71_11825 PF02021 Uncharacterised protein family UPF0102 CIW71_11865 PF00145 C-5 cytosine-specific DNA methylase CIW71_11875 PF02796 Helix-turn-helix domain of resolvase CIW71_11875 PF00665 Integrase core domain CIW71_11880 PF01695 IstB-like ATP binding protein CIW71_11885 PF01131 DNA topoisomerase CIW71_11885 PF01751 Toprim domain CIW71_11895 PF00436 Single-strand binding protein family CIW71_11940 PF13614 AAA domain CIW71_11965 PF00145 C-5 cytosine-specific DNA methylase CIW71_11975 PF01695 IstB-like ATP binding protein CIW71_11980 PF02796 Helix-turn-helix domain of resolvase CIW71_11980 PF00665 Integrase core domain CIW71_12035 PF00975 Thioesterase domain CIW71_12035 PF00668 Condensation domain CIW71_12035 PF13193 AMP-binding enzyme C-terminal domain CIW71_12035 PF00501 AMP-binding enzyme CIW71_12035 PF00550 Phosphopantetheine attachment site CIW71_12040 PF01648 4'-phosphopantetheinyl transferase superfamily CIW71_12040 PF17837 4'-phosphopantetheinyl transferase N-terminal domain CIW71_12050 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CIW71_12050 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CIW71_12050 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CIW71_12060 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CIW71_12075 PF00196 Bacterial regulatory proteins, luxR family CIW71_12075 PF00072 Response regulator receiver domain CIW71_12080 PF12111 Polyribonucleotide phosphorylase C terminal CIW71_12080 PF10150 Ribonuclease E/G family CIW71_12080 PF00575 S1 RNA binding domain CIW71_12085 PF00849 RNA pseudouridylate synthase CIW71_12085 PF01479 S4 domain CIW71_12090 PF11737 Protein of unknown function (DUF3300) CIW71_12095 PF02535 ZIP Zinc transporter CIW71_12105 PF01329 Pterin 4 alpha carbinolamine dehydratase CIW71_12110 PF01106 NifU-like domain CIW71_12170 PF17091 Inovirus G7P protein CIW71_12210 PF00665 Integrase core domain CIW71_12210 PF02796 Helix-turn-helix domain of resolvase CIW71_12215 PF01695 IstB-like ATP binding protein CIW71_12260 PF17091 Inovirus G7P protein CIW71_12315 PF09335 SNARE associated Golgi protein CIW71_12325 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CIW71_12330 PF07995 Glucose / Sorbosone dehydrogenase CIW71_12340 PF00144 Beta-lactamase CIW71_12350 PF00072 Response regulator receiver domain CIW71_12350 PF04397 LytTr DNA-binding domain CIW71_12355 PF07694 5TMR of 5TMR-LYT CIW71_12355 PF06580 Histidine kinase CIW71_12355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_12365 PF03797 Autotransporter beta-domain CIW71_12365 PF00082 Subtilase family CIW71_12375 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CIW71_12375 PF00529 HlyD membrane-fusion protein of T1SS CIW71_12380 PF00873 AcrB/AcrD/AcrF family CIW71_12390 PF00512 His Kinase A (phospho-acceptor) domain CIW71_12390 PF08448 PAS fold CIW71_12390 PF13426 PAS domain CIW71_12390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_12390 PF00072 Response regulator receiver domain CIW71_12395 PF00072 Response regulator receiver domain CIW71_12395 PF00196 Bacterial regulatory proteins, luxR family CIW71_12400 PF12951 Passenger-associated-transport-repeat CIW71_12400 PF12951 Passenger-associated-transport-repeat CIW71_12430 PF05974 Domain of unknown function (DUF892) CIW71_12455 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CIW71_12455 PF14824 Sirohaem biosynthesis protein central CIW71_12455 PF10414 Sirohaem synthase dimerisation region CIW71_12465 PF12804 MobA-like NTP transferase domain CIW71_12470 PF00994 Probable molybdopterin binding domain CIW71_12470 PF03453 MoeA N-terminal region (domain I and II) CIW71_12470 PF03454 MoeA C-terminal region (domain IV) CIW71_12480 PF03372 Endonuclease/Exonuclease/phosphatase family CIW71_12490 PF03377 TAL effector repeat CIW71_12565 PF02796 Helix-turn-helix domain of resolvase CIW71_12565 PF00665 Integrase core domain CIW71_12615 PF01526 Tn3 transposase DDE domain CIW71_12615 PF13700 Domain of unknown function (DUF4158) CIW71_12655 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CIW71_12665 PF03377 TAL effector repeat CIW71_12670 PF01381 Helix-turn-helix CIW71_12680 PF00239 Resolvase, N terminal domain CIW71_12680 PF02796 Helix-turn-helix domain of resolvase CIW71_12685 PF01555 DNA methylase CIW71_12690 PF09571 XcyI restriction endonuclease CIW71_12750 PF00145 C-5 cytosine-specific DNA methylase CIW71_12800 PF08240 Alcohol dehydrogenase GroES-like domain CIW71_12800 PF00107 Zinc-binding dehydrogenase CIW71_12800 PF13823 Alcohol dehydrogenase GroES-associated CIW71_12840 PF00899 ThiF family CIW71_12845 PF03453 MoeA N-terminal region (domain I and II) CIW71_12845 PF03454 MoeA C-terminal region (domain IV) CIW71_12845 PF00994 Probable molybdopterin binding domain CIW71_12850 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CIW71_12850 PF01926 50S ribosome-binding GTPase CIW71_12855 PF13360 PQQ-like domain CIW71_12855 PF01011 PQQ enzyme repeat CIW71_12865 PF13464 Domain of unknown function (DUF4115) CIW71_12875 PF04055 Radical SAM superfamily CIW71_12880 PF00334 Nucleoside diphosphate kinase CIW71_12890 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CIW71_12890 PF00378 Enoyl-CoA hydratase/isomerase CIW71_12890 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CIW71_12895 PF02803 Thiolase, C-terminal domain CIW71_12895 PF00108 Thiolase, N-terminal domain CIW71_12905 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CIW71_12910 PF16193 AAA C-terminal domain CIW71_12910 PF12002 MgsA AAA+ ATPase C terminal CIW71_12910 PF00004 ATPase family associated with various cellular activities (AAA) CIW71_12920 PF03548 Outer membrane lipoprotein carrier protein LolA CIW71_12930 PF17854 FtsK alpha domain CIW71_12930 PF09397 Ftsk gamma domain CIW71_12930 PF01580 FtsK/SpoIIIE family CIW71_12930 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CIW71_12935 PF07992 Pyridine nucleotide-disulphide oxidoreductase CIW71_12945 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CIW71_12950 PF01176 Translation initiation factor 1A / IF-1 CIW71_12955 PF17871 AAA lid domain CIW71_12955 PF10431 C-terminal, D2-small domain, of ClpB protein CIW71_12955 PF00004 ATPase family associated with various cellular activities (AAA) CIW71_12955 PF02861 Clp amino terminal domain, pathogenicity island component CIW71_12955 PF07724 AAA domain (Cdc48 subfamily) CIW71_12960 PF02617 ATP-dependent Clp protease adaptor protein ClpS CIW71_12965 PF00293 NUDIX domain CIW71_12975 PF04356 Protein of unknown function (DUF489) CIW71_12980 PF12729 Four helix bundle sensory module for signal transduction CIW71_12980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW71_12980 PF00672 HAMP domain CIW71_12990 PF00563 EAL domain CIW71_12990 PF00990 Diguanylate cyclase, GGDEF domain CIW71_12990 PF03707 Bacterial signalling protein N terminal repeat CIW71_12995 PF07730 Histidine kinase CIW71_12995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_13000 PF03707 Bacterial signalling protein N terminal repeat CIW71_13000 PF00563 EAL domain CIW71_13000 PF00990 Diguanylate cyclase, GGDEF domain CIW71_13005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_13005 PF00512 His Kinase A (phospho-acceptor) domain CIW71_13005 PF00989 PAS fold CIW71_13005 PF13426 PAS domain CIW71_13005 PF13188 PAS domain CIW71_13025 PF01584 CheW-like domain CIW71_13025 PF00072 Response regulator receiver domain CIW71_13035 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CIW71_13035 PF00460 Flagella basal body rod protein CIW71_13040 PF03963 Flagellar hook capping protein - N-terminal region CIW71_13045 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CIW71_13045 PF00460 Flagella basal body rod protein CIW71_13045 PF07559 Flagellar basal body protein FlaE CIW71_13050 PF00460 Flagella basal body rod protein CIW71_13050 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CIW71_13065 PF00460 Flagella basal body rod protein CIW71_13065 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CIW71_13070 PF02107 Flagellar L-ring protein CIW71_13075 PF02119 Flagellar P-ring protein CIW71_13080 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CIW71_13080 PF10135 Rod binding protein CIW71_13085 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CIW71_13085 PF07196 Flagellin hook IN motif CIW71_13090 PF00700 Bacterial flagellin C-terminal helical region CIW71_13090 PF00669 Bacterial flagellin N-terminal helical region CIW71_13095 PF00669 Bacterial flagellin N-terminal helical region CIW71_13095 PF00700 Bacterial flagellin C-terminal helical region CIW71_13100 PF02465 Flagellar hook-associated protein 2 N-terminus CIW71_13100 PF07195 Flagellar hook-associated protein 2 C-terminus CIW71_13100 PF07196 Flagellin hook IN motif CIW71_13105 PF02561 Flagellar protein FliS CIW71_13120 PF00072 Response regulator receiver domain CIW71_13120 PF00196 Bacterial regulatory proteins, luxR family CIW71_13125 PF00309 Sigma-54 factor, Activator interacting domain (AID) CIW71_13125 PF04963 Sigma-54 factor, core binding domain CIW71_13125 PF04552 Sigma-54, DNA binding domain CIW71_13130 PF01339 CheB methylesterase CIW71_13130 PF00072 Response regulator receiver domain CIW71_13135 PF00158 Sigma-54 interaction domain CIW71_13135 PF02954 Bacterial regulatory protein, Fis family CIW71_13135 PF00072 Response regulator receiver domain CIW71_13140 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CIW71_13150 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CIW71_13150 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CIW71_13200 PF00535 Glycosyl transferase family 2 CIW71_13200 PF00534 Glycosyl transferases group 1 CIW71_13205 PF02049 Flagellar hook-basal body complex protein FliE CIW71_13210 PF01514 Secretory protein of YscJ/FliF family CIW71_13210 PF08345 Flagellar M-ring protein C-terminal CIW71_13215 PF14841 FliG middle domain CIW71_13215 PF01706 FliG C-terminal domain CIW71_13215 PF14842 FliG N-terminal domain CIW71_13225 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CIW71_13225 PF18269 T3SS EscN ATPase C-terminal domain CIW71_13245 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CIW71_13245 PF02154 Flagellar motor switch protein FliM CIW71_13250 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CIW71_13255 PF04347 Flagellar biosynthesis protein, FliO CIW71_13260 PF00813 FliP family CIW71_13265 PF01313 Bacterial export proteins, family 3 CIW71_13270 PF01311 Bacterial export proteins, family 1 CIW71_13275 PF00563 EAL domain CIW71_13275 PF00990 Diguanylate cyclase, GGDEF domain CIW71_13275 PF03707 Bacterial signalling protein N terminal repeat CIW71_13275 PF13188 PAS domain CIW71_13285 PF00990 Diguanylate cyclase, GGDEF domain CIW71_13285 PF03707 Bacterial signalling protein N terminal repeat CIW71_13285 PF00563 EAL domain CIW71_13285 PF13188 PAS domain CIW71_13290 PF03707 Bacterial signalling protein N terminal repeat CIW71_13290 PF00990 Diguanylate cyclase, GGDEF domain CIW71_13290 PF00563 EAL domain CIW71_13295 PF01312 FlhB HrpN YscU SpaS Family CIW71_13300 PF00771 FHIPEP family CIW71_13305 PF00448 SRP54-type protein, GTPase domain CIW71_13310 PF10609 NUBPL iron-transfer P-loop NTPase CIW71_13315 PF04539 Sigma-70 region 3 CIW71_13315 PF04545 Sigma-70, region 4 CIW71_13315 PF04542 Sigma-70 region 2 CIW71_13320 PF00072 Response regulator receiver domain CIW71_13325 PF04344 Chemotaxis phosphatase, CheZ CIW71_13330 PF02895 Signal transducing histidine kinase, homodimeric domain CIW71_13330 PF01584 CheW-like domain CIW71_13330 PF01627 Hpt domain CIW71_13330 PF07194 P2 response regulator binding domain CIW71_13330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_13405 PF13614 AAA domain CIW71_13425 PF01618 MotA/TolQ/ExbB proton channel family CIW71_13430 PF00691 OmpA family CIW71_13430 PF13677 Membrane MotB of proton-channel complex MotA/MotB CIW71_13435 PF13614 AAA domain CIW71_13440 PF01584 CheW-like domain CIW71_13450 PF00072 Response regulator receiver domain CIW71_13455 PF01584 CheW-like domain CIW71_13455 PF09078 CheY binding CIW71_13455 PF01627 Hpt domain CIW71_13455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_13455 PF02895 Signal transducing histidine kinase, homodimeric domain CIW71_13460 PF00672 HAMP domain CIW71_13460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW71_13460 PF02203 Tar ligand binding domain homologue CIW71_13470 PF00672 HAMP domain CIW71_13470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW71_13470 PF17200 Single Cache domain 2 CIW71_13470 PF00672 HAMP domain CIW71_13470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW71_13470 PF17200 Single Cache domain 2 CIW71_13475 PF02203 Tar ligand binding domain homologue CIW71_13475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW71_13475 PF00672 HAMP domain CIW71_13490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW71_13490 PF02203 Tar ligand binding domain homologue CIW71_13490 PF00672 HAMP domain CIW71_13495 PF00672 HAMP domain CIW71_13495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW71_13500 PF00672 HAMP domain CIW71_13500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW71_13500 PF02203 Tar ligand binding domain homologue CIW71_13515 PF02203 Tar ligand binding domain homologue CIW71_13515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW71_13515 PF00672 HAMP domain CIW71_13520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW71_13520 PF00672 HAMP domain CIW71_13520 PF02203 Tar ligand binding domain homologue CIW71_13525 PF00672 HAMP domain CIW71_13525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW71_13525 PF02203 Tar ligand binding domain homologue CIW71_13530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW71_13530 PF02203 Tar ligand binding domain homologue CIW71_13530 PF00672 HAMP domain CIW71_13545 PF07238 PilZ domain CIW71_13545 PF07317 Flagellar regulator YcgR CIW71_13550 PF01584 CheW-like domain CIW71_13560 PF00672 HAMP domain CIW71_13560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW71_13560 PF02203 Tar ligand binding domain homologue CIW71_13565 PF03705 CheR methyltransferase, all-alpha domain CIW71_13565 PF01739 CheR methyltransferase, SAM binding domain CIW71_13570 PF03975 CheD chemotactic sensory transduction CIW71_13575 PF00072 Response regulator receiver domain CIW71_13575 PF01339 CheB methylesterase CIW71_13580 PF00990 Diguanylate cyclase, GGDEF domain CIW71_13580 PF03707 Bacterial signalling protein N terminal repeat CIW71_13580 PF00563 EAL domain CIW71_13585 PF00561 alpha/beta hydrolase fold CIW71_13590 PF00330 Aconitase family (aconitate hydratase) CIW71_13590 PF06434 Aconitate hydratase 2 N-terminus CIW71_13590 PF11791 Aconitate B N-terminal domain CIW71_13605 PF00330 Aconitase family (aconitate hydratase) CIW71_13605 PF00694 Aconitase C-terminal domain CIW71_13615 PF00501 AMP-binding enzyme CIW71_13615 PF13193 AMP-binding enzyme C-terminal domain CIW71_13620 PF00378 Enoyl-CoA hydratase/isomerase CIW71_13625 PF00072 Response regulator receiver domain CIW71_13625 PF01627 Hpt domain CIW71_13625 PF00512 His Kinase A (phospho-acceptor) domain CIW71_13625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_13630 PF00072 Response regulator receiver domain CIW71_13640 PF00152 tRNA synthetases class II (D, K and N) CIW71_13640 PF01336 OB-fold nucleic acid binding domain CIW71_13645 PF00472 RF-1 domain CIW71_13645 PF03462 PCRF domain CIW71_13650 PF04397 LytTr DNA-binding domain CIW71_13650 PF00072 Response regulator receiver domain CIW71_13685 PF02272 DHHA1 domain CIW71_13685 PF01368 DHH family CIW71_13685 PF17768 RecJ OB domain CIW71_13695 PF03449 Transcription elongation factor, N-terminal CIW71_13695 PF01272 Transcription elongation factor, GreA/GreB, C-term CIW71_13700 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CIW71_13700 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CIW71_13700 PF02142 MGS-like domain CIW71_13710 PF00117 Glutamine amidotransferase class-I CIW71_13710 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CIW71_13715 PF01113 Dihydrodipicolinate reductase, N-terminus CIW71_13715 PF05173 Dihydrodipicolinate reductase, C-terminus CIW71_13720 PF03475 3-alpha domain CIW71_13720 PF03473 MOSC domain CIW71_13725 PF00155 Aminotransferase class I and II CIW71_13740 PF02421 Ferrous iron transport protein B CIW71_13740 PF07664 Ferrous iron transport protein B C terminus CIW71_13740 PF07670 Nucleoside recognition CIW71_13750 PF00378 Enoyl-CoA hydratase/isomerase CIW71_13760 PF00682 HMGL-like CIW71_13765 PF00106 short chain dehydrogenase CIW71_13770 PF08207 Elongation factor P (EF-P) KOW-like domain CIW71_13770 PF09285 Elongation factor P, C-terminal CIW71_13770 PF01132 Elongation factor P (EF-P) OB domain CIW71_13790 PF02913 FAD linked oxidases, C-terminal domain CIW71_13790 PF01565 FAD binding domain CIW71_13795 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CIW71_13795 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CIW71_13795 PF01842 ACT domain CIW71_13805 PF13520 Amino acid permease CIW71_13810 PF13520 Amino acid permease CIW71_13815 PF00596 Class II Aldolase and Adducin N-terminal domain CIW71_13820 PF03079 ARD/ARD' family CIW71_13840 PF01502 Phosphoribosyl-AMP cyclohydrolase CIW71_13840 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CIW71_13845 PF00977 Histidine biosynthesis protein CIW71_13850 PF00977 Histidine biosynthesis protein CIW71_13855 PF00117 Glutamine amidotransferase class-I CIW71_13860 PF00475 Imidazoleglycerol-phosphate dehydratase CIW71_13865 PF00155 Aminotransferase class I and II CIW71_13870 PF00815 Histidinol dehydrogenase CIW71_13875 PF08029 HisG, C-terminal domain CIW71_13875 PF01634 ATP phosphoribosyltransferase CIW71_13885 PF03129 Anticodon binding domain CIW71_13885 PF13393 Histidyl-tRNA synthetase CIW71_13890 PF00027 Cyclic nucleotide-binding domain CIW71_13890 PF13545 Crp-like helix-turn-helix domain CIW71_13900 PF00291 Pyridoxal-phosphate dependent enzyme CIW71_13900 PF14821 Threonine synthase N terminus CIW71_13910 PF08544 GHMP kinases C terminal CIW71_13910 PF00288 GHMP kinases N terminal domain CIW71_13915 PF13840 ACT domain CIW71_13915 PF01842 ACT domain CIW71_13915 PF00696 Amino acid kinase family CIW71_13915 PF00742 Homoserine dehydrogenase CIW71_13915 PF03447 Homoserine dehydrogenase, NAD binding domain CIW71_13940 PF08479 POTRA domain, ShlB-type CIW71_13940 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CIW71_13940 PF17287 POTRA domain CIW71_13950 PF01522 Polysaccharide deacetylase CIW71_13950 PF14883 Hypothetical glycosyl hydrolase family 13 CIW71_13955 PF00535 Glycosyl transferase family 2 CIW71_13970 PF00171 Aldehyde dehydrogenase family CIW71_13990 PF01180 Dihydroorotate dehydrogenase CIW71_13995 PF01565 FAD binding domain CIW71_13995 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CIW71_14000 PF00892 EamA-like transporter family CIW71_14010 PF01177 Asp/Glu/Hydantoin racemase CIW71_14015 PF07690 Major Facilitator Superfamily CIW71_14025 PF01569 PAP2 superfamily CIW71_14030 PF04551 GcpE protein CIW71_14045 PF00072 Response regulator receiver domain CIW71_14050 PF00150 Cellulase (glycosyl hydrolase family 5) CIW71_14050 PF02013 Cellulose or protein binding domain CIW71_14060 PF00563 EAL domain CIW71_14060 PF00360 Phytochrome region CIW71_14060 PF01590 GAF domain CIW71_14060 PF00990 Diguanylate cyclase, GGDEF domain CIW71_14065 PF00474 Sodium:solute symporter family CIW71_14075 PF01915 Glycosyl hydrolase family 3 C-terminal domain CIW71_14075 PF00933 Glycosyl hydrolase family 3 N terminal domain CIW71_14075 PF14310 Fibronectin type III-like domain CIW71_14100 PF00342 Phosphoglucose isomerase CIW71_14105 PF02261 Aspartate decarboxylase CIW71_14110 PF02569 Pantoate-beta-alanine ligase CIW71_14115 PF02548 Ketopantoate hydroxymethyltransferase CIW71_14120 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CIW71_14125 PF01743 Poly A polymerase head domain CIW71_14125 PF12626 Polymerase A arginine-rich C-terminus CIW71_14125 PF12627 Probable RNA and SrmB- binding site of polymerase A CIW71_14135 PF02649 Type I GTP cyclohydrolase folE2 CIW71_14140 PF01520 N-acetylmuramoyl-L-alanine amidase CIW71_14160 PF00083 Sugar (and other) transporter CIW71_14170 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CIW71_14170 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CIW71_14180 PF01055 Glycosyl hydrolases family 31 CIW71_14180 PF17137 Domain of unknown function (DUF5110) CIW71_14180 PF16338 Domain of unknown function (DUF4968) CIW71_14195 PF00942 Cellulose binding domain CIW71_14195 PF03442 Carbohydrate binding domain X2 CIW71_14210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW71_14210 PF03466 LysR substrate binding domain CIW71_14220 PF01081 KDPG and KHG aldolase CIW71_14225 PF13378 Enolase C-terminal domain-like CIW71_14225 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CIW71_14230 PF08450 SMP-30/Gluconolactonase/LRE-like region CIW71_14235 PF05035 2-keto-3-deoxy-galactonokinase CIW71_14240 PF11953 Domain of unknown function (DUF3470) CIW71_14240 PF00037 4Fe-4S binding domain CIW71_14250 PF00701 Dihydrodipicolinate synthetase family CIW71_14265 PF00578 AhpC/TSA family CIW71_14270 PF13638 PIN domain CIW71_14270 PF02562 PhoH-like protein CIW71_14285 PF08543 Phosphomethylpyrimidine kinase CIW71_14310 PF03466 LysR substrate binding domain CIW71_14310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW71_14315 PF02678 Pirin CIW71_14315 PF17954 Quercetinase C-terminal cupin domain CIW71_14320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW71_14320 PF08447 PAS fold CIW71_14320 PF13426 PAS domain CIW71_14335 PF02599 Global regulator protein family CIW71_14340 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CIW71_14340 PF01411 tRNA synthetases class II (A) CIW71_14340 PF02272 DHHA1 domain CIW71_14345 PF02631 RecX family CIW71_14355 PF00154 recA bacterial DNA recombination protein CIW71_14360 PF00717 Peptidase S24-like CIW71_14360 PF01726 LexA DNA binding domain CIW71_14365 PF03109 ABC1 family CIW71_14370 PF02464 Competence-damaged protein CIW71_14375 PF16360 GTP-binding GTPase Middle Region CIW71_14375 PF13167 GTP-binding GTPase N-terminal CIW71_14375 PF01926 50S ribosome-binding GTPase CIW71_14380 PF17209 Hfq protein CIW71_14390 PF00809 Pterin binding enzyme CIW71_14395 PF06480 FtsH Extracellular CIW71_14395 PF17862 AAA+ lid domain CIW71_14395 PF00004 ATPase family associated with various cellular activities (AAA) CIW71_14395 PF01434 Peptidase family M41 CIW71_14400 PF01728 FtsJ-like methyltransferase CIW71_14405 PF01985 CRS1 / YhbY (CRM) domain CIW71_14410 PF04430 Protein of unknown function (DUF498/DUF598) CIW71_14415 PF01476 LysM domain CIW71_14415 PF01551 Peptidase family M23 CIW71_14420 PF09335 SNARE associated Golgi protein CIW71_14430 PF01975 Survival protein SurE CIW71_14435 PF01713 Smr domain CIW71_14440 PF01142 tRNA pseudouridine synthase D (TruD) CIW71_14445 PF02542 YgbB family CIW71_14450 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CIW71_14455 PF04977 Septum formation initiator CIW71_14460 PF03952 Enolase, N-terminal domain CIW71_14460 PF00113 Enolase, C-terminal TIM barrel domain CIW71_14470 PF00793 DAHP synthetase I family CIW71_14475 PF00117 Glutamine amidotransferase class-I CIW71_14475 PF06418 CTP synthase N-terminus CIW71_14485 PF01751 Toprim domain CIW71_14485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_14485 PF00986 DNA gyrase B subunit, carboxyl terminus CIW71_14485 PF00204 DNA gyrase B CIW71_14500 PF01384 Phosphate transporter family CIW71_14515 PF01595 Cyclin M transmembrane N-terminal domain CIW71_14515 PF03471 Transporter associated domain CIW71_14515 PF00571 CBS domain CIW71_14530 PF00296 Luciferase-like monooxygenase CIW71_14535 PF07690 Major Facilitator Superfamily CIW71_14540 PF00664 ABC transporter transmembrane region CIW71_14540 PF00005 ABC transporter CIW71_14545 PF00005 ABC transporter CIW71_14585 PF08241 Methyltransferase domain CIW71_14600 PF00535 Glycosyl transferase family 2 CIW71_14605 PF01943 Polysaccharide biosynthesis protein CIW71_14610 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CIW71_14630 PF05523 WxcM-like, C-terminal CIW71_14645 PF00034 Cytochrome c CIW71_14685 PF13406 Transglycosylase SLT domain CIW71_14725 PF08281 Sigma-70, region 4 CIW71_14725 PF04542 Sigma-70 region 2 CIW71_14735 PF00082 Subtilase family CIW71_14740 PF01578 Cytochrome C assembly protein CIW71_14750 PF03100 CcmE CIW71_14755 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CIW71_14755 PF01578 Cytochrome C assembly protein CIW71_14760 PF08534 Redoxin CIW71_14765 PF03918 Cytochrome C biogenesis protein CIW71_14775 PF00072 Response regulator receiver domain CIW71_14775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_14775 PF13426 PAS domain CIW71_14790 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CIW71_14790 PF00072 Response regulator receiver domain CIW71_14790 PF00512 His Kinase A (phospho-acceptor) domain CIW71_14790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_14790 PF01627 Hpt domain CIW71_14790 PF00672 HAMP domain CIW71_14810 PF01494 FAD binding domain CIW71_14815 PF02203 Tar ligand binding domain homologue CIW71_14815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW71_14815 PF00672 HAMP domain CIW71_14830 PF03466 LysR substrate binding domain CIW71_14830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW71_14835 PF02525 Flavodoxin-like fold CIW71_14840 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CIW71_14840 PF02403 Seryl-tRNA synthetase N-terminal domain CIW71_14845 PF03544 Gram-negative bacterial TonB protein C-terminal CIW71_14855 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CIW71_14860 PF00800 Prephenate dehydratase CIW71_14860 PF01817 Chorismate mutase type II CIW71_14860 PF01842 ACT domain CIW71_14865 PF00266 Aminotransferase class-V CIW71_14870 PF00174 Oxidoreductase molybdopterin binding domain CIW71_14875 PF01794 Ferric reductase like transmembrane component CIW71_14900 PF00392 Bacterial regulatory proteins, gntR family CIW71_14900 PF07702 UTRA domain CIW71_14915 PF07969 Amidohydrolase family CIW71_14920 PF00221 Aromatic amino acid lyase CIW71_14930 PF17391 Urocanase N-terminal domain CIW71_14930 PF01175 Urocanase Rossmann-like domain CIW71_14930 PF17392 Urocanase C-terminal domain CIW71_14945 PF13360 PQQ-like domain CIW71_14950 PF00521 DNA gyrase/topoisomerase IV, subunit A CIW71_14950 PF03989 DNA gyrase C-terminal domain, beta-propeller CIW71_14955 PF01008 Initiation factor 2 subunit family CIW71_14970 PF00152 tRNA synthetases class II (D, K and N) CIW71_14975 PF01653 NAD-dependent DNA ligase adenylation domain CIW71_14975 PF00533 BRCA1 C Terminus (BRCT) domain CIW71_14975 PF03120 NAD-dependent DNA ligase OB-fold domain CIW71_14975 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CIW71_14975 PF12826 Helix-hairpin-helix motif CIW71_14980 PF00155 Aminotransferase class I and II CIW71_14995 PF04354 ZipA, C-terminal FtsZ-binding domain CIW71_15000 PF02463 RecF/RecN/SMC N terminal domain CIW71_15005 PF01281 Ribosomal protein L9, N-terminal domain CIW71_15005 PF03948 Ribosomal protein L9, C-terminal domain CIW71_15010 PF01084 Ribosomal protein S18 CIW71_15015 PF01250 Ribosomal protein S6 CIW71_15020 PF01521 Iron-sulphur cluster biosynthesis CIW71_15030 PF01336 OB-fold nucleic acid binding domain CIW71_15030 PF00152 tRNA synthetases class II (D, K and N) CIW71_15050 PF04299 Putative FMN-binding domain CIW71_15075 PF00196 Bacterial regulatory proteins, luxR family CIW71_15075 PF00072 Response regulator receiver domain CIW71_15120 PF00484 Carbonic anhydrase CIW71_15125 PF06052 3-hydroxyanthranilic acid dioxygenase CIW71_15135 PF00266 Aminotransferase class-V CIW71_15140 PF01494 FAD binding domain CIW71_15145 PF00929 Exonuclease CIW71_15145 PF08411 Exonuclease C-terminal CIW71_15170 PF01513 ATP-NAD kinase CIW71_15175 PF01170 Putative RNA methylase family UPF0020 CIW71_15175 PF02926 THUMP domain CIW71_15175 PF10672 S-adenosylmethionine-dependent methyltransferase CIW71_15215 PF00581 Rhodanese-like domain CIW71_15220 PF00293 NUDIX domain CIW71_15225 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CIW71_15225 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CIW71_15230 PF00378 Enoyl-CoA hydratase/isomerase CIW71_15240 PF10576 Iron-sulfur binding domain of endonuclease III CIW71_15240 PF00730 HhH-GPD superfamily base excision DNA repair protein CIW71_15240 PF00633 Helix-hairpin-helix motif CIW71_15245 PF00916 Sulfate permease family CIW71_15245 PF01740 STAS domain CIW71_15250 PF00484 Carbonic anhydrase CIW71_15265 PF12849 PBP superfamily domain CIW71_15270 PF12849 PBP superfamily domain CIW71_15275 PF00528 Binding-protein-dependent transport system inner membrane component CIW71_15280 PF00528 Binding-protein-dependent transport system inner membrane component CIW71_15285 PF00005 ABC transporter CIW71_15290 PF01895 PhoU domain CIW71_15300 PF00929 Exonuclease CIW71_15305 PF07694 5TMR of 5TMR-LYT CIW71_15305 PF00990 Diguanylate cyclase, GGDEF domain CIW71_15310 PF08032 RNA 2'-O ribose methyltransferase substrate binding CIW71_15310 PF00588 SpoU rRNA Methylase family CIW71_15320 PF00773 RNB domain CIW71_15320 PF08461 Ribonuclease R winged-helix domain CIW71_15320 PF17876 Cold shock domain CIW71_15320 PF00575 S1 RNA binding domain CIW71_15320 PF08206 Ribonuclease B OB domain CIW71_15340 PF02770 Acyl-CoA dehydrogenase, middle domain CIW71_15340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CIW71_15340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CIW71_15345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CIW71_15345 PF02770 Acyl-CoA dehydrogenase, middle domain CIW71_15345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CIW71_15360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CIW71_15360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CIW71_15360 PF02770 Acyl-CoA dehydrogenase, middle domain CIW71_15365 PF01209 ubiE/COQ5 methyltransferase family CIW71_15370 PF00809 Pterin binding enzyme CIW71_15370 PF02574 Homocysteine S-methyltransferase CIW71_15375 PF02310 B12 binding domain CIW71_15375 PF02607 B12 binding domain CIW71_15375 PF02574 Homocysteine S-methyltransferase CIW71_15375 PF02965 Vitamin B12 dependent methionine synthase, activation domain CIW71_15375 PF00809 Pterin binding enzyme CIW71_15385 PF00294 pfkB family carbohydrate kinase CIW71_15390 PF07690 Major Facilitator Superfamily CIW71_15395 PF00356 Bacterial regulatory proteins, lacI family CIW71_15410 PF04102 SlyX CIW71_15415 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CIW71_15415 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CIW71_15415 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CIW71_15420 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CIW71_15420 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CIW71_15425 PF00255 Glutathione peroxidase CIW71_15435 PF00392 Bacterial regulatory proteins, gntR family CIW71_15440 PF00005 ABC transporter CIW71_15465 PF00206 Lyase CIW71_15465 PF10415 Fumarase C C-terminus CIW71_15470 PF01595 Cyclin M transmembrane N-terminal domain CIW71_15470 PF03471 Transporter associated domain CIW71_15470 PF00571 CBS domain CIW71_15480 PF08328 Adenylosuccinate lyase C-terminal CIW71_15480 PF00206 Lyase CIW71_15490 PF08007 Cupin superfamily protein CIW71_15500 PF16078 2-oxoglutarate dehydrogenase N-terminus CIW71_15500 PF00676 Dehydrogenase E1 component CIW71_15500 PF02779 Transketolase, pyrimidine binding domain CIW71_15500 PF16870 2-oxoglutarate dehydrogenase C-terminal CIW71_15505 PF02817 e3 binding domain CIW71_15505 PF00364 Biotin-requiring enzyme CIW71_15505 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CIW71_15510 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CIW71_15510 PF07992 Pyridine nucleotide-disulphide oxidoreductase CIW71_15515 PF03641 Possible lysine decarboxylase CIW71_15520 PF01205 Uncharacterized protein family UPF0029 CIW71_15525 PF00664 ABC transporter transmembrane region CIW71_15525 PF00005 ABC transporter CIW71_15530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW71_15530 PF03466 LysR substrate binding domain CIW71_15535 PF00005 ABC transporter CIW71_15535 PF00664 ABC transporter transmembrane region CIW71_15535 PF03412 Peptidase C39 family CIW71_15560 PF08543 Phosphomethylpyrimidine kinase CIW71_15570 PF01556 DnaJ C terminal domain CIW71_15570 PF00226 DnaJ domain CIW71_15570 PF00684 DnaJ central domain CIW71_15575 PF00012 Hsp70 protein CIW71_15580 PF01025 GrpE CIW71_15585 PF01628 HrcA protein C terminal domain CIW71_15585 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding CIW71_15590 PF02463 RecF/RecN/SMC N terminal domain CIW71_15595 PF01475 Ferric uptake regulator family CIW71_15600 PF04355 SmpA / OmlA family CIW71_15605 PF03658 RnfH family Ubiquitin CIW71_15610 PF03364 Polyketide cyclase / dehydrase and lipid transport CIW71_15615 PF01668 SmpB protein CIW71_15620 PF00082 Subtilase family CIW71_15650 PF03412 Peptidase C39 family CIW71_15650 PF00664 ABC transporter transmembrane region CIW71_15650 PF00005 ABC transporter CIW71_15675 PF00990 Diguanylate cyclase, GGDEF domain CIW71_15685 PF00990 Diguanylate cyclase, GGDEF domain CIW71_15685 PF08448 PAS fold CIW71_15690 PF02321 Outer membrane efflux protein CIW71_15695 PF00106 short chain dehydrogenase CIW71_15700 PF00873 AcrB/AcrD/AcrF family CIW71_15705 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CIW71_15720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW71_15720 PF03466 LysR substrate binding domain CIW71_15725 PF05736 OprF membrane domain CIW71_15725 PF00691 OmpA family CIW71_15735 PF03441 FAD binding domain of DNA photolyase CIW71_15735 PF00875 DNA photolyase CIW71_15740 PF03796 DnaB-like helicase C terminal domain CIW71_15740 PF00772 DnaB-like helicase N terminal domain CIW71_15745 PF03358 NADPH-dependent FMN reductase CIW71_15750 PF13537 Glutamine amidotransferase domain CIW71_15750 PF00733 Asparagine synthase CIW71_15760 PF00043 Glutathione S-transferase, C-terminal domain CIW71_15760 PF02798 Glutathione S-transferase, N-terminal domain CIW71_15770 PF02770 Acyl-CoA dehydrogenase, middle domain CIW71_15770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CIW71_15770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CIW71_15785 PF01026 TatD related DNase CIW71_15790 PF00899 ThiF family CIW71_15805 PF00313 'Cold-shock' DNA-binding domain CIW71_15825 PF02253 Phospholipase A1 CIW71_15830 PF00484 Carbonic anhydrase CIW71_15840 PF05681 Fumarate hydratase (Fumerase) CIW71_15840 PF05683 Fumarase C-terminus CIW71_15845 PF00005 ABC transporter CIW71_15850 PF00175 Oxidoreductase NAD-binding domain CIW71_15850 PF00970 Oxidoreductase FAD-binding domain CIW71_15855 PF00255 Glutathione peroxidase CIW71_15865 PF01432 Peptidase family M3 CIW71_15870 PF12802 MarR family CIW71_15895 PF00854 POT family CIW71_15905 PF14310 Fibronectin type III-like domain CIW71_15905 PF00933 Glycosyl hydrolase family 3 N terminal domain CIW71_15905 PF01915 Glycosyl hydrolase family 3 C-terminal domain CIW71_15915 PF07690 Major Facilitator Superfamily CIW71_15920 PF00529 HlyD membrane-fusion protein of T1SS CIW71_15920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CIW71_15925 PF02321 Outer membrane efflux protein CIW71_15940 PF00521 DNA gyrase/topoisomerase IV, subunit A CIW71_15940 PF03989 DNA gyrase C-terminal domain, beta-propeller CIW71_15945 PF05724 Thiopurine S-methyltransferase (TPMT) CIW71_15950 PF00210 Ferritin-like domain CIW71_15965 PF07715 TonB-dependent Receptor Plug Domain CIW71_15965 PF00593 TonB dependent receptor CIW71_15975 PF00733 Asparagine synthase CIW71_15975 PF13537 Glutamine amidotransferase domain CIW71_15980 PF07687 Peptidase dimerisation domain CIW71_15980 PF01546 Peptidase family M20/M25/M40 CIW71_15985 PF03960 ArsC family CIW71_15990 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CIW71_15990 PF00132 Bacterial transferase hexapeptide (six repeats) CIW71_15990 PF14602 Hexapeptide repeat of succinyl-transferase CIW71_15995 PF01909 Nucleotidyltransferase domain CIW71_15995 PF01966 HD domain CIW71_15995 PF08335 GlnD PII-uridylyltransferase CIW71_16000 PF00557 Metallopeptidase family M24 CIW71_16035 PF00318 Ribosomal protein S2 CIW71_16040 PF00889 Elongation factor TS CIW71_16045 PF00990 Diguanylate cyclase, GGDEF domain CIW71_16045 PF00072 Response regulator receiver domain CIW71_16050 PF00696 Amino acid kinase family CIW71_16055 PF01765 Ribosome recycling factor CIW71_16060 PF01255 Putative undecaprenyl diphosphate synthase CIW71_16070 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CIW71_16070 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CIW71_16070 PF13288 DXP reductoisomerase C-terminal domain CIW71_16075 PF02163 Peptidase family M50 CIW71_16075 PF17820 PDZ domain CIW71_16080 PF07244 Surface antigen variable number repeat CIW71_16080 PF01103 Surface antigen CIW71_16090 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CIW71_16090 PF00132 Bacterial transferase hexapeptide (six repeats) CIW71_16095 PF07977 FabA-like domain CIW71_16100 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CIW71_16100 PF00132 Bacterial transferase hexapeptide (six repeats) CIW71_16105 PF02684 Lipid-A-disaccharide synthetase CIW71_16110 PF01351 Ribonuclease HII CIW71_16115 PF01336 OB-fold nucleic acid binding domain CIW71_16115 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CIW71_16115 PF14579 Helix-hairpin-helix motif CIW71_16115 PF02811 PHP domain CIW71_16115 PF07733 Bacterial DNA polymerase III alpha NTPase domain CIW71_16120 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CIW71_16155 PF03551 Transcriptional regulator PadR-like family CIW71_16175 PF02592 Putative vitamin uptake transporter CIW71_16185 PF02574 Homocysteine S-methyltransferase CIW71_16190 PF00324 Amino acid permease CIW71_16195 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CIW71_16200 PF00005 ABC transporter CIW71_16200 PF13732 Domain of unknown function (DUF4162) CIW71_16215 PF01588 Putative tRNA binding domain CIW71_16215 PF09334 tRNA synthetases class I (M) CIW71_16225 PF04060 Putative Fe-S cluster CIW71_16240 PF04542 Sigma-70 region 2 CIW71_16240 PF04545 Sigma-70, region 4 CIW71_16285 PF01042 Endoribonuclease L-PSP CIW71_16295 PF03706 Lysylphosphatidylglycerol synthase TM region CIW71_16295 PF09924 Uncharacterised conserved protein (DUF2156) CIW71_16330 PF07690 Major Facilitator Superfamily CIW71_16340 PF03831 PhnA domain CIW71_16340 PF08274 PhnA Zinc-Ribbon CIW71_16350 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CIW71_16370 PF01258 Prokaryotic dksA/traR C4-type zinc finger CIW71_16380 PF07043 Protein of unknown function (DUF1328) CIW71_16385 PF01863 Protein of unknown function DUF45 CIW71_16400 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CIW71_16400 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CIW71_16405 PF00082 Subtilase family CIW71_16405 PF12951 Passenger-associated-transport-repeat CIW71_16405 PF03797 Autotransporter beta-domain CIW71_16410 PF02803 Thiolase, C-terminal domain CIW71_16410 PF00108 Thiolase, N-terminal domain CIW71_16430 PF00990 Diguanylate cyclase, GGDEF domain CIW71_16430 PF00072 Response regulator receiver domain CIW71_16445 PF04675 DNA ligase N terminus CIW71_16445 PF01068 ATP dependent DNA ligase domain CIW71_16445 PF04679 ATP dependent DNA ligase C terminal region CIW71_16455 PF04679 ATP dependent DNA ligase C terminal region CIW71_16455 PF01068 ATP dependent DNA ligase domain CIW71_16455 PF04675 DNA ligase N terminus CIW71_16460 PF00270 DEAD/DEAH box helicase CIW71_16460 PF00271 Helicase conserved C-terminal domain CIW71_16460 PF08494 DEAD/H associated CIW71_16470 PF01494 FAD binding domain CIW71_16475 PF00313 'Cold-shock' DNA-binding domain CIW71_16480 PF01048 Phosphorylase superfamily CIW71_16490 PF00933 Glycosyl hydrolase family 3 N terminal domain CIW71_16495 PF04244 Deoxyribodipyrimidine photo-lyase-related protein CIW71_16500 PF01593 Flavin containing amine oxidoreductase CIW71_16505 PF01323 DSBA-like thioredoxin domain CIW71_16515 PF05958 tRNA (Uracil-5-)-methyltransferase CIW71_16525 PF11967 Recombination protein O N terminal CIW71_16525 PF02565 Recombination protein O C terminal CIW71_16530 PF01926 50S ribosome-binding GTPase CIW71_16530 PF07650 KH domain CIW71_16535 PF00035 Double-stranded RNA binding motif CIW71_16535 PF14622 Ribonuclease-III-like CIW71_16545 PF10502 Signal peptidase, peptidase S26 CIW71_16550 PF00679 Elongation factor G C-terminus CIW71_16550 PF03144 Elongation factor Tu domain 2 CIW71_16550 PF00009 Elongation factor Tu GTP binding domain CIW71_16550 PF06421 GTP-binding protein LepA C-terminus CIW71_16555 PF13180 PDZ domain CIW71_16565 PF08281 Sigma-70, region 4 CIW71_16565 PF04542 Sigma-70 region 2 CIW71_16570 PF00378 Enoyl-CoA hydratase/isomerase CIW71_16570 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CIW71_16570 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CIW71_16575 PF01545 Cation efflux family CIW71_16580 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CIW71_16580 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CIW71_16585 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CIW71_16585 PF00378 Enoyl-CoA hydratase/isomerase CIW71_16585 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CIW71_16590 PF00378 Enoyl-CoA hydratase/isomerase CIW71_16595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CIW71_16595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CIW71_16595 PF02770 Acyl-CoA dehydrogenase, middle domain CIW71_16600 PF00171 Aldehyde dehydrogenase family CIW71_16605 PF06114 IrrE N-terminal-like domain CIW71_16605 PF09856 Predicted transcriptional regulator (DUF2083) CIW71_16605 PF01381 Helix-turn-helix CIW71_16615 PF07745 Glycosyl hydrolase family 53 CIW71_16620 PF02837 Glycosyl hydrolases family 2, sugar binding domain CIW71_16620 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CIW71_16620 PF16355 Domain of unknown function (DUF4982) CIW71_16620 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 CIW71_16620 PF00703 Glycosyl hydrolases family 2 CIW71_16635 PF05598 Transposase domain (DUF772) CIW71_16665 PF05190 MutS family domain IV CIW71_16665 PF05192 MutS domain III CIW71_16665 PF05188 MutS domain II CIW71_16665 PF01624 MutS domain I CIW71_16665 PF00488 MutS domain V CIW71_16675 PF00141 Peroxidase CIW71_16680 PF01479 S4 domain CIW71_16695 PF01554 MatE CIW71_16700 PF01245 Ribosomal protein L19 CIW71_16705 PF01746 tRNA (Guanine-1)-methyltransferase CIW71_16710 PF01782 RimM N-terminal domain CIW71_16710 PF05239 PRC-barrel domain CIW71_16715 PF00886 Ribosomal protein S16 CIW71_16720 PF01063 Amino-transferase class IV CIW71_16725 PF03060 Nitronate monooxygenase CIW71_16730 PF02881 SRP54-type protein, helical bundle domain CIW71_16730 PF02978 Signal peptide binding domain CIW71_16730 PF00448 SRP54-type protein, GTPase domain CIW71_16740 PF01578 Cytochrome C assembly protein CIW71_16750 PF01263 Aldose 1-epimerase CIW71_16755 PF06964 Alpha-L-arabinofuranosidase C-terminal domain CIW71_16765 PF00072 Response regulator receiver domain CIW71_16770 PF00072 Response regulator receiver domain CIW71_16770 PF13426 PAS domain CIW71_16770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_16775 PF00512 His Kinase A (phospho-acceptor) domain CIW71_16775 PF00072 Response regulator receiver domain CIW71_16775 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CIW71_16775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_16775 PF01627 Hpt domain CIW71_16775 PF00672 HAMP domain CIW71_16780 PF03705 CheR methyltransferase, all-alpha domain CIW71_16780 PF01739 CheR methyltransferase, SAM binding domain CIW71_16785 PF01339 CheB methylesterase CIW71_16790 PF00072 Response regulator receiver domain CIW71_16790 PF00990 Diguanylate cyclase, GGDEF domain CIW71_16795 PF07237 Protein of unknown function (DUF1428) CIW71_16800 PF00085 Thioredoxin CIW71_16805 PF07715 TonB-dependent Receptor Plug Domain CIW71_16805 PF00593 TonB dependent receptor CIW71_16810 PF04616 Glycosyl hydrolases family 43 CIW71_16810 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CIW71_16815 PF00072 Response regulator receiver domain CIW71_16815 PF13188 PAS domain CIW71_16815 PF08448 PAS fold CIW71_16815 PF00512 His Kinase A (phospho-acceptor) domain CIW71_16815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_16820 PF00672 HAMP domain CIW71_16820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_16820 PF00512 His Kinase A (phospho-acceptor) domain CIW71_16820 PF01627 Hpt domain CIW71_16820 PF00072 Response regulator receiver domain CIW71_16820 PF17149 Periplasmic sensor domain found in signal transduction proteins CIW71_16830 PF13581 Histidine kinase-like ATPase domain CIW71_16835 PF01740 STAS domain CIW71_16840 PF01740 STAS domain CIW71_16840 PF08678 Rsbr N terminal CIW71_16855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_16855 PF00183 Hsp90 protein CIW71_16860 PF12833 Helix-turn-helix domain CIW71_16870 PF05656 Protein of unknown function (DUF805) CIW71_16875 PF18073 Rubredoxin metal binding domain CIW71_16885 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CIW71_16890 PF00510 Cytochrome c oxidase subunit III CIW71_16895 PF00115 Cytochrome C and Quinol oxidase polypeptide I CIW71_16905 PF00589 Phage integrase family CIW71_16930 PF13091 PLD-like domain CIW71_16930 PF13087 AAA domain CIW71_16935 PF03389 MobA/MobL family CIW71_17030 PF02401 LytB protein CIW71_17035 PF01252 Signal peptidase (SPase) II CIW71_17040 PF06827 Zinc finger found in FPG and IleRS CIW71_17040 PF08264 Anticodon-binding domain of tRNA CIW71_17040 PF00133 tRNA synthetases class I (I, L, M and V) CIW71_17045 PF01687 Riboflavin kinase CIW71_17045 PF06574 FAD synthetase CIW71_17050 PF03023 Lipid II flippase MurJ CIW71_17055 PF01649 Ribosomal protein S20 CIW71_17060 PF01926 50S ribosome-binding GTPase CIW71_17060 PF01018 GTP1/OBG CIW71_17065 PF01016 Ribosomal L27 protein CIW71_17070 PF00829 Ribosomal prokaryotic L21 protein CIW71_17075 PF17760 UvrA interaction domain CIW71_17075 PF17755 UvrA DNA-binding domain CIW71_17075 PF00005 ABC transporter CIW71_17090 PF00378 Enoyl-CoA hydratase/isomerase CIW71_17120 PF04377 Arginine-tRNA-protein transferase, C terminus CIW71_17120 PF04376 Arginine-tRNA-protein transferase, N terminus CIW71_17130 PF02222 ATP-grasp domain CIW71_17165 PF00730 HhH-GPD superfamily base excision DNA repair protein CIW71_17180 PF00072 Response regulator receiver domain CIW71_17180 PF00196 Bacterial regulatory proteins, luxR family CIW71_17185 PF07730 Histidine kinase CIW71_17200 PF03775 Septum formation inhibitor MinC, C-terminal domain CIW71_17200 PF05209 Septum formation inhibitor MinC, N-terminal domain CIW71_17205 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CIW71_17210 PF03776 Septum formation topological specificity factor MinE CIW71_17220 PF00512 His Kinase A (phospho-acceptor) domain CIW71_17220 PF08521 Two-component sensor kinase N-terminal CIW71_17220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_17225 PF00072 Response regulator receiver domain CIW71_17225 PF00486 Transcriptional regulatory protein, C terminal CIW71_17240 PF00884 Sulfatase CIW71_17240 PF08019 Phosphoethanolamine transferase EptA/EptB CIW71_17255 PF07690 Major Facilitator Superfamily CIW71_17260 PF02347 Glycine cleavage system P-protein CIW71_17265 PF00135 Carboxylesterase family CIW71_17270 PF00248 Aldo/keto reductase family CIW71_17275 PF06628 Catalase-related immune-responsive CIW71_17275 PF18011 C-terminal domain found in long catalases CIW71_17275 PF00199 Catalase CIW71_17310 PF12833 Helix-turn-helix domain CIW71_17310 PF02311 AraC-like ligand binding domain CIW71_17340 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CIW71_17340 PF00326 Prolyl oligopeptidase family CIW71_17340 PF07676 WD40-like Beta Propeller Repeat CIW71_17355 PF03169 OPT oligopeptide transporter protein CIW71_17365 PF00326 Prolyl oligopeptidase family CIW71_17375 PF02811 PHP domain CIW71_17375 PF14579 Helix-hairpin-helix motif CIW71_17375 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CIW71_17375 PF07733 Bacterial DNA polymerase III alpha NTPase domain CIW71_17390 PF01726 LexA DNA binding domain CIW71_17390 PF00717 Peptidase S24-like CIW71_17425 PF00111 2Fe-2S iron-sulfur cluster binding domain CIW71_17425 PF01799 [2Fe-2S] binding domain CIW71_17430 PF03450 CO dehydrogenase flavoprotein C-terminal domain CIW71_17430 PF00941 FAD binding domain in molybdopterin dehydrogenase CIW71_17435 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CIW71_17435 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CIW71_17440 PF17755 UvrA DNA-binding domain CIW71_17460 PF07992 Pyridine nucleotide-disulphide oxidoreductase CIW71_17470 PF00106 short chain dehydrogenase CIW71_17475 PF17678 Glycosyl hydrolase family 92 N-terminal domain CIW71_17475 PF07971 Glycosyl hydrolase family 92 CIW71_17505 PF01256 Carbohydrate kinase CIW71_17510 PF13456 Reverse transcriptase-like CIW71_17510 PF00300 Histidine phosphatase superfamily (branch 1) CIW71_17515 PF00440 Bacterial regulatory proteins, tetR family CIW71_17515 PF13977 BetI-type transcriptional repressor, C-terminal CIW71_17535 PF01555 DNA methylase CIW71_17550 PF00176 SNF2 family N-terminal domain CIW71_17550 PF00271 Helicase conserved C-terminal domain CIW71_17570 PF01695 IstB-like ATP binding protein CIW71_17575 PF00665 Integrase core domain CIW71_17575 PF02796 Helix-turn-helix domain of resolvase CIW71_17590 PF00440 Bacterial regulatory proteins, tetR family CIW71_17605 PF11838 ERAP1-like C-terminal domain CIW71_17605 PF01433 Peptidase family M1 domain CIW71_17610 PF00709 Adenylosuccinate synthetase CIW71_17620 PF01145 SPFH domain / Band 7 family CIW71_17625 PF01145 SPFH domain / Band 7 family CIW71_17625 PF12221 Bacterial membrane protein N terminal CIW71_17630 PF00072 Response regulator receiver domain CIW71_17635 PF00226 DnaJ domain CIW71_17635 PF01556 DnaJ C terminal domain CIW71_17645 PF08534 Redoxin CIW71_17655 PF00905 Penicillin binding protein transpeptidase domain CIW71_17655 PF00912 Transglycosylase CIW71_17655 PF06832 Penicillin-Binding Protein C-terminus Family CIW71_17670 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain CIW71_17670 PF07703 Alpha-2-macroglobulin bait region domain CIW71_17670 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain CIW71_17670 PF11974 Bacterial alpha-2-macroglobulin MG3 domain CIW71_17670 PF00207 Alpha-2-macroglobulin family CIW71_17670 PF01835 MG2 domain CIW71_17670 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain CIW71_17670 PF17962 Bacterial macroglobulin domain 6 CIW71_17680 PF00593 TonB dependent receptor CIW71_17680 PF07715 TonB-dependent Receptor Plug Domain CIW71_17685 PF04303 PrpF protein CIW71_17705 PF00330 Aconitase family (aconitate hydratase) CIW71_17705 PF00694 Aconitase C-terminal domain CIW71_17710 PF00285 Citrate synthase, C-terminal domain CIW71_17720 PF02954 Bacterial regulatory protein, Fis family CIW71_17720 PF06506 Propionate catabolism activator CIW71_17720 PF00158 Sigma-54 interaction domain CIW71_17740 PF09115 DNA polymerase III, delta subunit, C terminal CIW71_17745 PF02618 YceG-like family CIW71_17750 PF04715 Anthranilate synthase component I, N terminal region CIW71_17750 PF00425 chorismate binding enzyme CIW71_17755 PF02801 Beta-ketoacyl synthase, C-terminal domain CIW71_17755 PF00109 Beta-ketoacyl synthase, N-terminal domain CIW71_17760 PF00550 Phosphopantetheine attachment site CIW71_17770 PF00698 Acyl transferase domain CIW71_17780 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CIW71_17780 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CIW71_17785 PF01783 Ribosomal L32p protein family CIW71_17790 PF02620 Large ribosomal RNA subunit accumulation protein YceD CIW71_17795 PF02545 Maf-like protein CIW71_17815 PF17863 AAA lid domain CIW71_17815 PF07726 ATPase family associated with various cellular activities (AAA) CIW71_17825 PF01841 Transglutaminase-like superfamily CIW71_17825 PF13559 Domain of unknown function (DUF4129) CIW71_17825 PF11992 Domain of unknown function (DUF3488) CIW71_17835 PF01230 HIT domain CIW71_17840 PF13662 Toprim domain CIW71_17840 PF02132 RecR protein CIW71_17845 PF02575 YbaB/EbfC DNA-binding family CIW71_17850 PF12170 DNA polymerase III tau subunit V interacting with alpha CIW71_17850 PF12169 DNA polymerase III subunits gamma and tau domain III CIW71_17875 PF07669 Eco57I restriction-modification methylase CIW71_17875 PF12950 TaqI-like C-terminal specificity domain CIW71_17885 PF00665 Integrase core domain CIW71_17885 PF02796 Helix-turn-helix domain of resolvase CIW71_17890 PF01695 IstB-like ATP binding protein CIW71_17920 PF00665 Integrase core domain CIW71_17920 PF02796 Helix-turn-helix domain of resolvase CIW71_17925 PF01695 IstB-like ATP binding protein CIW71_17985 PF02391 MoaE protein CIW71_17990 PF02597 ThiS family CIW71_17995 PF01967 MoaC family CIW71_18000 PF04055 Radical SAM superfamily CIW71_18000 PF06463 Molybdenum Cofactor Synthesis C CIW71_18005 PF00753 Metallo-beta-lactamase superfamily CIW71_18005 PF12706 Beta-lactamase superfamily domain CIW71_18015 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CIW71_18035 PF00929 Exonuclease CIW71_18040 PF00075 RNase H CIW71_18050 PF16123 Hydroxyacylglutathione hydrolase C-terminus CIW71_18050 PF00753 Metallo-beta-lactamase superfamily CIW71_18055 PF05257 CHAP domain CIW71_18055 PF01476 LysM domain CIW71_18080 PF00216 Bacterial DNA-binding protein CIW71_18085 PF00004 ATPase family associated with various cellular activities (AAA) CIW71_18085 PF05362 Lon protease (S16) C-terminal proteolytic domain CIW71_18085 PF02190 ATP-dependent protease La (LON) substrate-binding domain CIW71_18090 PF06689 ClpX C4-type zinc finger CIW71_18090 PF07724 AAA domain (Cdc48 subfamily) CIW71_18090 PF10431 C-terminal, D2-small domain, of ClpB protein CIW71_18095 PF00574 Clp protease CIW71_18100 PF05697 Bacterial trigger factor protein (TF) CIW71_18100 PF05698 Bacterial trigger factor protein (TF) C-terminus CIW71_18110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_18110 PF00512 His Kinase A (phospho-acceptor) domain CIW71_18110 PF00989 PAS fold CIW71_18145 PF00180 Isocitrate/isopropylmalate dehydrogenase CIW71_18155 PF00462 Glutaredoxin CIW71_18160 PF13181 Tetratricopeptide repeat CIW71_18160 PF01435 Peptidase family M48 CIW71_18165 PF00072 Response regulator receiver domain CIW71_18165 PF00486 Transcriptional regulatory protein, C terminal CIW71_18170 PF11808 Phosphate regulon sensor protein PhoR CIW71_18170 PF00989 PAS fold CIW71_18170 PF00512 His Kinase A (phospho-acceptor) domain CIW71_18170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_18175 PF13090 Polyphosphate kinase C-terminal domain 2 CIW71_18175 PF13089 Polyphosphate kinase N-terminal domain CIW71_18175 PF17941 Polyphosphate kinase C-terminal domain 1 CIW71_18175 PF02503 Polyphosphate kinase middle domain CIW71_18180 PF02541 Ppx/GppA phosphatase family CIW71_18190 PF01569 PAP2 superfamily CIW71_18195 PF00149 Calcineurin-like phosphoesterase CIW71_18230 PF00156 Phosphoribosyl transferase domain CIW71_18245 PF02875 Mur ligase family, glutamate ligase domain CIW71_18245 PF08245 Mur ligase middle domain CIW71_18250 PF00300 Histidine phosphatase superfamily (branch 1) CIW71_18255 PF10459 Peptidase S46 CIW71_18265 PF05506 Domain of unknown function (DUF756) CIW71_18265 PF04185 Phosphoesterase family CIW71_18280 PF08240 Alcohol dehydrogenase GroES-like domain CIW71_18280 PF00107 Zinc-binding dehydrogenase CIW71_18290 PF17850 CysA C-terminal regulatory domain CIW71_18290 PF12857 TOBE-like domain CIW71_18290 PF00005 ABC transporter CIW71_18295 PF00528 Binding-protein-dependent transport system inner membrane component CIW71_18300 PF00528 Binding-protein-dependent transport system inner membrane component CIW71_18310 PF00155 Aminotransferase class I and II CIW71_18320 PF00849 RNA pseudouridylate synthase CIW71_18330 PF05736 OprF membrane domain CIW71_18330 PF00691 OmpA family CIW71_18340 PF08240 Alcohol dehydrogenase GroES-like domain CIW71_18340 PF00107 Zinc-binding dehydrogenase CIW71_18345 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CIW71_18345 PF07992 Pyridine nucleotide-disulphide oxidoreductase CIW71_18365 PF02798 Glutathione S-transferase, N-terminal domain CIW71_18365 PF00043 Glutathione S-transferase, C-terminal domain CIW71_18370 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CIW71_18370 PF00056 lactate/malate dehydrogenase, NAD binding domain CIW71_18375 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CIW71_18400 PF01474 Class-II DAHP synthetase family CIW71_18420 PF02600 Disulfide bond formation protein DsbB CIW71_18425 PF01196 Ribosomal protein L17 CIW71_18430 PF01000 RNA polymerase Rpb3/RpoA insert domain CIW71_18430 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CIW71_18430 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CIW71_18435 PF01479 S4 domain CIW71_18435 PF00163 Ribosomal protein S4/S9 N-terminal domain CIW71_18440 PF00411 Ribosomal protein S11 CIW71_18445 PF00416 Ribosomal protein S13/S18 CIW71_18450 PF00344 SecY translocase CIW71_18455 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CIW71_18460 PF00327 Ribosomal protein L30p/L7e CIW71_18465 PF03719 Ribosomal protein S5, C-terminal domain CIW71_18465 PF00333 Ribosomal protein S5, N-terminal domain CIW71_18470 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CIW71_18475 PF00347 Ribosomal protein L6 CIW71_18480 PF00410 Ribosomal protein S8 CIW71_18485 PF00253 Ribosomal protein S14p/S29e CIW71_18490 PF00673 ribosomal L5P family C-terminus CIW71_18490 PF00281 Ribosomal protein L5 CIW71_18495 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CIW71_18495 PF00467 KOW motif CIW71_18500 PF00238 Ribosomal protein L14p/L23e CIW71_18505 PF00366 Ribosomal protein S17 CIW71_18510 PF00831 Ribosomal L29 protein CIW71_18515 PF00252 Ribosomal protein L16p/L10e CIW71_18520 PF07650 KH domain CIW71_18520 PF00189 Ribosomal protein S3, C-terminal domain CIW71_18525 PF00237 Ribosomal protein L22p/L17e CIW71_18530 PF00203 Ribosomal protein S19 CIW71_18535 PF00181 Ribosomal Proteins L2, RNA binding domain CIW71_18535 PF03947 Ribosomal Proteins L2, C-terminal domain CIW71_18540 PF00276 Ribosomal protein L23 CIW71_18545 PF00573 Ribosomal protein L4/L1 family CIW71_18550 PF00297 Ribosomal protein L3 CIW71_18555 PF00338 Ribosomal protein S10p/S20e CIW71_18560 PF03144 Elongation factor Tu domain 2 CIW71_18560 PF03143 Elongation factor Tu C-terminal domain CIW71_18560 PF00009 Elongation factor Tu GTP binding domain CIW71_18565 PF03764 Elongation factor G, domain IV CIW71_18565 PF00009 Elongation factor Tu GTP binding domain CIW71_18565 PF00679 Elongation factor G C-terminus CIW71_18565 PF03144 Elongation factor Tu domain 2 CIW71_18565 PF14492 Elongation Factor G, domain II CIW71_18570 PF00177 Ribosomal protein S7p/S5e CIW71_18575 PF00164 Ribosomal protein S12/S23 CIW71_18580 PF04998 RNA polymerase Rpb1, domain 5 CIW71_18580 PF05000 RNA polymerase Rpb1, domain 4 CIW71_18580 PF04983 RNA polymerase Rpb1, domain 3 CIW71_18580 PF00623 RNA polymerase Rpb1, domain 2 CIW71_18580 PF04997 RNA polymerase Rpb1, domain 1 CIW71_18585 PF04565 RNA polymerase Rpb2, domain 3 CIW71_18585 PF04561 RNA polymerase Rpb2, domain 2 CIW71_18585 PF10385 RNA polymerase beta subunit external 1 domain CIW71_18585 PF04563 RNA polymerase beta subunit CIW71_18585 PF04560 RNA polymerase Rpb2, domain 7 CIW71_18585 PF00562 RNA polymerase Rpb2, domain 6 CIW71_18590 PF16320 Ribosomal protein L7/L12 dimerisation domain CIW71_18590 PF00542 Ribosomal protein L7/L12 C-terminal domain CIW71_18595 PF00466 Ribosomal protein L10 CIW71_18600 PF00687 Ribosomal protein L1p/L10e family CIW71_18605 PF03946 Ribosomal protein L11, N-terminal domain CIW71_18605 PF00298 Ribosomal protein L11, RNA binding domain CIW71_18610 PF02357 Transcription termination factor nusG CIW71_18610 PF00467 KOW motif CIW71_18615 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CIW71_18625 PF00009 Elongation factor Tu GTP binding domain CIW71_18625 PF03143 Elongation factor Tu C-terminal domain CIW71_18625 PF03144 Elongation factor Tu domain 2 CIW71_18645 PF06071 Protein of unknown function (DUF933) CIW71_18645 PF01926 50S ribosome-binding GTPase CIW71_18650 PF01195 Peptidyl-tRNA hydrolase CIW71_18655 PF01386 Ribosomal L25p family CIW71_18655 PF14693 Ribosomal protein TL5, C-terminal domain CIW71_18660 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CIW71_18660 PF14572 Phosphoribosyl synthetase-associated domain CIW71_18670 PF00288 GHMP kinases N terminal domain CIW71_18670 PF08544 GHMP kinases C terminal CIW71_18675 PF03550 Outer membrane lipoprotein LolB CIW71_18685 PF01488 Shikimate / quinate 5-dehydrogenase CIW71_18685 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CIW71_18685 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CIW71_18690 PF03462 PCRF domain CIW71_18690 PF00472 RF-1 domain CIW71_18700 PF00994 Probable molybdopterin binding domain CIW71_18705 PF03976 Polyphosphate kinase 2 (PPK2) CIW71_18715 PF00708 Acylphosphatase CIW71_18720 PF08534 Redoxin CIW71_18725 PF03631 Virulence factor BrkB CIW71_18730 PF03358 NADPH-dependent FMN reductase CIW71_18740 PF17189 Glycosyl hydrolase family 30 beta sandwich domain CIW71_18740 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain CIW71_18750 PF04073 Aminoacyl-tRNA editing domain CIW71_18755 PF04151 Bacterial pre-peptidase C-terminal domain CIW71_18755 PF00082 Subtilase family CIW71_18770 PF01063 Amino-transferase class IV CIW71_18785 PF02233 NAD(P) transhydrogenase beta subunit CIW71_18790 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CIW71_18810 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CIW71_18810 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CIW71_18810 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CIW71_18840 PF01612 3'-5' exonuclease CIW71_18840 PF01367 5'-3' exonuclease, C-terminal SAM fold CIW71_18840 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CIW71_18840 PF00476 DNA polymerase family A CIW71_18845 PF00293 NUDIX domain CIW71_18855 PF00561 alpha/beta hydrolase fold CIW71_18860 PF17827 PrmC N-terminal domain CIW71_18860 PF05175 Methyltransferase small domain CIW71_18865 PF10417 C-terminal domain of 1-Cys peroxiredoxin CIW71_18865 PF00578 AhpC/TSA family CIW71_18870 PF13192 Thioredoxin domain CIW71_18870 PF07992 Pyridine nucleotide-disulphide oxidoreductase CIW71_18875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW71_18875 PF03466 LysR substrate binding domain CIW71_18885 PF01272 Transcription elongation factor, GreA/GreB, C-term CIW71_18885 PF14760 Rnk N-terminus CIW71_18890 PF00923 Transaldolase/Fructose-6-phosphate aldolase CIW71_18900 PF01625 Peptide methionine sulfoxide reductase CIW71_18910 PF00072 Response regulator receiver domain CIW71_18910 PF00196 Bacterial regulatory proteins, luxR family CIW71_18915 PF00072 Response regulator receiver domain CIW71_18915 PF17149 Periplasmic sensor domain found in signal transduction proteins CIW71_18915 PF00672 HAMP domain CIW71_18915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_18915 PF00512 His Kinase A (phospho-acceptor) domain CIW71_18915 PF01627 Hpt domain CIW71_18920 PF00990 Diguanylate cyclase, GGDEF domain CIW71_18920 PF00072 Response regulator receiver domain CIW71_18935 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CIW71_18935 PF00749 tRNA synthetases class I (E and Q), catalytic domain CIW71_18945 PF00892 EamA-like transporter family CIW71_18980 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CIW71_18980 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CIW71_18985 PF08450 SMP-30/Gluconolactonase/LRE-like region CIW71_19005 PF00378 Enoyl-CoA hydratase/isomerase CIW71_19010 PF00171 Aldehyde dehydrogenase family CIW71_19015 PF00501 AMP-binding enzyme CIW71_19015 PF13193 AMP-binding enzyme C-terminal domain CIW71_19020 PF03466 LysR substrate binding domain CIW71_19020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW71_19025 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CIW71_19025 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit CIW71_19030 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CIW71_19035 PF00392 Bacterial regulatory proteins, gntR family CIW71_19035 PF07729 FCD domain CIW71_19055 PF01494 FAD binding domain CIW71_19060 PF01494 FAD binding domain CIW71_19075 PF01923 Cobalamin adenosyltransferase CIW71_19080 PF00850 Histone deacetylase domain CIW71_19095 PF04453 LPS transport system D CIW71_19095 PF03968 OstA-like protein CIW71_19100 PF09312 SurA N-terminal domain CIW71_19100 PF00639 PPIC-type PPIASE domain CIW71_19105 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CIW71_19110 PF00398 Ribosomal RNA adenine dimethylase CIW71_19115 PF04379 ApaG domain CIW71_19120 PF00149 Calcineurin-like phosphoesterase CIW71_19125 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CIW71_19125 PF00005 ABC transporter CIW71_19130 PF00528 Binding-protein-dependent transport system inner membrane component CIW71_19130 PF12911 N-terminal TM domain of oligopeptide transport permease C CIW71_19135 PF00528 Binding-protein-dependent transport system inner membrane component CIW71_19140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CIW71_19145 PF00296 Luciferase-like monooxygenase CIW71_19165 PF03358 NADPH-dependent FMN reductase CIW71_19170 PF00296 Luciferase-like monooxygenase CIW71_19180 PF00528 Binding-protein-dependent transport system inner membrane component CIW71_19185 PF00005 ABC transporter CIW71_19190 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CIW71_19190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CIW71_19195 PF00158 Sigma-54 interaction domain CIW71_19200 PF00186 Dihydrofolate reductase CIW71_19210 PF00303 Thymidylate synthase CIW71_19215 PF01790 Prolipoprotein diacylglyceryl transferase CIW71_19235 PF01219 Prokaryotic diacylglycerol kinase CIW71_19250 PF00486 Transcriptional regulatory protein, C terminal CIW71_19250 PF00072 Response regulator receiver domain CIW71_19255 PF13472 GDSL-like Lipase/Acylhydrolase family CIW71_19260 PF00005 ABC transporter CIW71_19270 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CIW71_19280 PF00005 ABC transporter CIW71_19285 PF00528 Binding-protein-dependent transport system inner membrane component CIW71_19305 PF00593 TonB dependent receptor CIW71_19305 PF07715 TonB-dependent Receptor Plug Domain CIW71_19315 PF00248 Aldo/keto reductase family CIW71_19325 PF01773 Na+ dependent nucleoside transporter N-terminus CIW71_19325 PF07662 Na+ dependent nucleoside transporter C-terminus CIW71_19325 PF07670 Nucleoside recognition CIW71_19330 PF00294 pfkB family carbohydrate kinase CIW71_19340 PF01207 Dihydrouridine synthase (Dus) CIW71_19345 PF13649 Methyltransferase domain CIW71_19355 PF02773 S-adenosylmethionine synthetase, C-terminal domain CIW71_19355 PF02772 S-adenosylmethionine synthetase, central domain CIW71_19355 PF00438 S-adenosylmethionine synthetase, N-terminal domain CIW71_19360 PF00328 Histidine phosphatase superfamily (branch 2) CIW71_19395 PF00311 Phosphoenolpyruvate carboxylase CIW71_19405 PF05221 S-adenosyl-L-homocysteine hydrolase CIW71_19405 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CIW71_19410 PF13649 Methyltransferase domain CIW71_19440 PF00128 Alpha amylase, catalytic domain CIW71_19445 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CIW71_19465 PF00109 Beta-ketoacyl synthase, N-terminal domain CIW71_19465 PF00550 Phosphopantetheine attachment site CIW71_19465 PF08659 KR domain CIW71_19465 PF02801 Beta-ketoacyl synthase, C-terminal domain CIW71_19465 PF16197 Ketoacyl-synthetase C-terminal extension CIW71_19465 PF14765 Polyketide synthase dehydratase CIW71_19465 PF00698 Acyl transferase domain CIW71_19465 PF00107 Zinc-binding dehydrogenase CIW71_19465 PF08240 Alcohol dehydrogenase GroES-like domain CIW71_19480 PF02219 Methylenetetrahydrofolate reductase CIW71_19490 PF00293 NUDIX domain CIW71_19495 PF01043 SecA preprotein cross-linking domain CIW71_19495 PF02810 SEC-C motif CIW71_19495 PF07517 SecA DEAD-like domain CIW71_19495 PF07516 SecA Wing and Scaffold domain CIW71_19500 PF01551 Peptidase family M23 CIW71_19500 PF01476 LysM domain CIW71_19500 PF08525 Opacity-associated protein A N-terminal motif CIW71_19510 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CIW71_19515 PF00091 Tubulin/FtsZ family, GTPase domain CIW71_19515 PF12327 FtsZ family, C-terminal domain CIW71_19520 PF02491 SHS2 domain inserted in FTSA CIW71_19525 PF08478 POTRA domain, FtsQ-type CIW71_19525 PF03799 Cell division protein FtsQ CIW71_19530 PF01820 D-ala D-ala ligase N-terminus CIW71_19530 PF07478 D-ala D-ala ligase C-terminus CIW71_19535 PF01225 Mur ligase family, catalytic domain CIW71_19535 PF08245 Mur ligase middle domain CIW71_19535 PF02875 Mur ligase family, glutamate ligase domain CIW71_19540 PF03033 Glycosyltransferase family 28 N-terminal domain CIW71_19540 PF04101 Glycosyltransferase family 28 C-terminal domain CIW71_19545 PF01098 Cell cycle protein CIW71_19550 PF00953 Glycosyl transferase family 4 CIW71_19555 PF02875 Mur ligase family, glutamate ligase domain CIW71_19555 PF01225 Mur ligase family, catalytic domain CIW71_19555 PF08245 Mur ligase middle domain CIW71_19560 PF02875 Mur ligase family, glutamate ligase domain CIW71_19560 PF01225 Mur ligase family, catalytic domain CIW71_19560 PF08245 Mur ligase middle domain CIW71_19565 PF00905 Penicillin binding protein transpeptidase domain CIW71_19565 PF03717 Penicillin-binding Protein dimerisation domain CIW71_19570 PF04999 Cell division protein FtsL CIW71_19575 PF01795 MraW methylase family CIW71_19580 PF02381 MraZ protein, putative antitoxin-like CIW71_19605 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CIW71_19615 PF02021 Uncharacterised protein family UPF0102 CIW71_19620 PF04307 LexA-binding, inner membrane-associated putative hydrolase CIW71_19625 PF02913 FAD linked oxidases, C-terminal domain CIW71_19625 PF01565 FAD binding domain CIW71_19640 PF00486 Transcriptional regulatory protein, C terminal CIW71_19640 PF00072 Response regulator receiver domain CIW71_19645 PF13493 Domain of unknown function (DUF4118) CIW71_19645 PF02702 Osmosensitive K+ channel His kinase sensor domain CIW71_19645 PF13492 GAF domain CIW71_19645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_19645 PF00512 His Kinase A (phospho-acceptor) domain CIW71_19660 PF02669 K+-transporting ATPase, c chain CIW71_19670 PF03814 Potassium-transporting ATPase A subunit CIW71_19695 PF00586 AIR synthase related protein, N-terminal domain CIW71_19695 PF02769 AIR synthase related protein, C-terminal domain CIW71_19700 PF01029 NusB family CIW71_19705 PF00885 6,7-dimethyl-8-ribityllumazine synthase CIW71_19710 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CIW71_19710 PF00925 GTP cyclohydrolase II CIW71_19715 PF00677 Lumazine binding domain CIW71_19730 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CIW71_19730 PF01872 RibD C-terminal domain CIW71_19740 PF03477 ATP cone domain CIW71_19745 PF00464 Serine hydroxymethyltransferase CIW71_19755 PF12848 ABC transporter CIW71_19755 PF00005 ABC transporter CIW71_19765 PF00892 EamA-like transporter family CIW71_19770 PF02567 Phenazine biosynthesis-like protein CIW71_19775 PF00392 Bacterial regulatory proteins, gntR family CIW71_19775 PF00155 Aminotransferase class I and II CIW71_19785 PF00756 Putative esterase CIW71_19790 PF04828 Glutathione-dependent formaldehyde-activating enzyme CIW71_19795 PF00107 Zinc-binding dehydrogenase CIW71_19795 PF08240 Alcohol dehydrogenase GroES-like domain CIW71_19800 PF02583 Metal-sensitive transcriptional repressor CIW71_19815 PF00072 Response regulator receiver domain CIW71_19815 PF00486 Transcriptional regulatory protein, C terminal CIW71_19820 PF00512 His Kinase A (phospho-acceptor) domain CIW71_19820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_19820 PF00672 HAMP domain CIW71_19825 PF04107 Glutamate-cysteine ligase family 2(GCS2) CIW71_19845 PF01926 50S ribosome-binding GTPase CIW71_19850 PF00034 Cytochrome c CIW71_19860 PF01323 DSBA-like thioredoxin domain CIW71_19875 PF02028 BCCT, betaine/carnitine/choline family transporter CIW71_19880 PF00171 Aldehyde dehydrogenase family CIW71_19885 PF05199 GMC oxidoreductase CIW71_19885 PF00732 GMC oxidoreductase CIW71_19890 PF12627 Probable RNA and SrmB- binding site of polymerase A CIW71_19890 PF01966 HD domain CIW71_19890 PF01743 Poly A polymerase head domain CIW71_19900 PF01979 Amidohydrolase family CIW71_19905 PF01380 SIS domain CIW71_19910 PF00356 Bacterial regulatory proteins, lacI family CIW71_19915 PF07690 Major Facilitator Superfamily CIW71_19935 PF02837 Glycosyl hydrolases family 2, sugar binding domain CIW71_19935 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CIW71_19935 PF16355 Domain of unknown function (DUF4982) CIW71_19935 PF00703 Glycosyl hydrolases family 2 CIW71_19935 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 CIW71_19960 PF03934 Type II secretion system (T2SS), protein K CIW71_19965 PF11612 Type II secretion system (T2SS), protein J CIW71_19965 PF07963 Prokaryotic N-terminal methylation motif CIW71_19970 PF07963 Prokaryotic N-terminal methylation motif CIW71_19970 PF02501 Type II secretion system (T2SS), protein I CIW71_19975 PF12019 Type II transport protein GspH CIW71_19975 PF07963 Prokaryotic N-terminal methylation motif CIW71_19980 PF07963 Prokaryotic N-terminal methylation motif CIW71_19980 PF08334 Type II secretion system (T2SS), protein G CIW71_19985 PF00482 Type II secretion system (T2SS), protein F CIW71_19990 PF00437 Type II/IV secretion system protein CIW71_19995 PF00263 Bacterial type II and III secretion system protein CIW71_19995 PF03958 Bacterial type II/III secretion system short domain CIW71_20045 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CIW71_20050 PF00512 His Kinase A (phospho-acceptor) domain CIW71_20050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_20055 PF00072 Response regulator receiver domain CIW71_20060 PF08446 PAS fold CIW71_20060 PF00512 His Kinase A (phospho-acceptor) domain CIW71_20060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_20060 PF01590 GAF domain CIW71_20060 PF00360 Phytochrome region CIW71_20065 PF04972 BON domain CIW71_20070 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CIW71_20070 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CIW71_20075 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CIW71_20075 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CIW71_20110 PF00293 NUDIX domain CIW71_20110 PF01467 Cytidylyltransferase-like CIW71_20120 PF03466 LysR substrate binding domain CIW71_20120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW71_20130 PF17804 Tail specific protease N-terminal domain CIW71_20130 PF03572 Peptidase family S41 CIW71_20130 PF11818 C-terminal domain of tail specific protease (DUF3340) CIW71_20130 PF00595 PDZ domain CIW71_20135 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CIW71_20135 PF04055 Radical SAM superfamily CIW71_20140 PF03099 Biotin/lipoate A/B protein ligase family CIW71_20145 PF04359 Protein of unknown function (DUF493) CIW71_20155 PF07943 Penicillin-binding protein 5, C-terminal domain CIW71_20155 PF00768 D-alanyl-D-alanine carboxypeptidase CIW71_20165 PF03330 Lytic transglycolase CIW71_20165 PF05036 Sporulation related domain CIW71_20170 PF13406 Transglycosylase SLT domain CIW71_20175 PF00295 Glycosyl hydrolases family 28 CIW71_20180 PF01098 Cell cycle protein CIW71_20185 PF00905 Penicillin binding protein transpeptidase domain CIW71_20185 PF03717 Penicillin-binding Protein dimerisation domain CIW71_20195 PF04085 rod shape-determining protein MreC CIW71_20205 PF00294 pfkB family carbohydrate kinase CIW71_20210 PF00158 Sigma-54 interaction domain CIW71_20210 PF02954 Bacterial regulatory protein, Fis family CIW71_20210 PF01590 GAF domain CIW71_20220 PF00107 Zinc-binding dehydrogenase CIW71_20220 PF08240 Alcohol dehydrogenase GroES-like domain CIW71_20235 PF00497 Bacterial extracellular solute-binding proteins, family 3 CIW71_20240 PF13360 PQQ-like domain CIW71_20260 PF01433 Peptidase family M1 domain CIW71_20260 PF11838 ERAP1-like C-terminal domain CIW71_20265 PF03707 Bacterial signalling protein N terminal repeat CIW71_20265 PF00990 Diguanylate cyclase, GGDEF domain CIW71_20265 PF00563 EAL domain CIW71_20270 PF01209 ubiE/COQ5 methyltransferase family CIW71_20280 PF13533 Biotin-lipoyl like CIW71_20285 PF13673 Acetyltransferase (GNAT) domain CIW71_20295 PF10431 C-terminal, D2-small domain, of ClpB protein CIW71_20295 PF07724 AAA domain (Cdc48 subfamily) CIW71_20295 PF00004 ATPase family associated with various cellular activities (AAA) CIW71_20300 PF00227 Proteasome subunit CIW71_20305 PF02899 Phage integrase, N-terminal SAM-like domain CIW71_20305 PF00589 Phage integrase family CIW71_20320 PF01678 Diaminopimelate epimerase CIW71_20330 PF04304 Protein of unknown function (DUF454) CIW71_20335 PF00326 Prolyl oligopeptidase family CIW71_20335 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CIW71_20340 PF00155 Aminotransferase class I and II CIW71_20350 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CIW71_20350 PF00326 Prolyl oligopeptidase family CIW71_20380 PF03900 Porphobilinogen deaminase, C-terminal domain CIW71_20380 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CIW71_20385 PF04397 LytTr DNA-binding domain CIW71_20385 PF00072 Response regulator receiver domain CIW71_20390 PF06580 Histidine kinase CIW71_20390 PF07694 5TMR of 5TMR-LYT CIW71_20400 PF13632 Glycosyl transferase family group 2 CIW71_20420 PF08448 PAS fold CIW71_20420 PF00990 Diguanylate cyclase, GGDEF domain CIW71_20425 PF01740 STAS domain CIW71_20425 PF00916 Sulfate permease family CIW71_20430 PF00553 Cellulose binding domain CIW71_20430 PF00150 Cellulase (glycosyl hydrolase family 5) CIW71_20435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW71_20435 PF00672 HAMP domain CIW71_20435 PF02203 Tar ligand binding domain homologue CIW71_20440 PF00990 Diguanylate cyclase, GGDEF domain CIW71_20440 PF08447 PAS fold CIW71_20440 PF08448 PAS fold CIW71_20440 PF00563 EAL domain CIW71_20480 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CIW71_20480 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CIW71_20490 PF01204 Trehalase CIW71_20500 PF01544 CorA-like Mg2+ transporter protein CIW71_20510 PF00324 Amino acid permease CIW71_20520 PF00497 Bacterial extracellular solute-binding proteins, family 3 CIW71_20525 PF00892 EamA-like transporter family CIW71_20550 PF05230 MASE2 domain CIW71_20550 PF00990 Diguanylate cyclase, GGDEF domain CIW71_20560 PF07759 Protein of unknown function (DUF1615) CIW71_20570 PF00326 Prolyl oligopeptidase family CIW71_20570 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CIW71_20580 PF03176 MMPL family CIW71_20580 PF12823 Domain of unknown function (DUF3817) CIW71_20610 PF13409 Glutathione S-transferase, N-terminal domain CIW71_20620 PF00106 short chain dehydrogenase CIW71_20635 PF00106 short chain dehydrogenase CIW71_20685 PF00456 Transketolase, thiamine diphosphate binding domain CIW71_20685 PF17831 Pyruvate dehydrogenase E1 component middle domain CIW71_20690 PF07745 Glycosyl hydrolase family 53 CIW71_20720 PF13419 Haloacid dehalogenase-like hydrolase CIW71_20725 PF07729 FCD domain CIW71_20725 PF00392 Bacterial regulatory proteins, gntR family CIW71_20735 PF00698 Acyl transferase domain CIW71_20740 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CIW71_20745 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG CIW71_20755 PF01039 Carboxyl transferase domain CIW71_20760 PF06857 Malonate decarboxylase delta subunit (MdcD) CIW71_20765 PF16957 Malonate decarboxylase, alpha subunit, transporter CIW71_20790 PF04264 YceI-like domain CIW71_20795 PF00881 Nitroreductase family CIW71_20815 PF02592 Putative vitamin uptake transporter CIW71_20820 PF08335 GlnD PII-uridylyltransferase CIW71_20820 PF03710 Glutamate-ammonia ligase adenylyltransferase CIW71_20830 PF08450 SMP-30/Gluconolactonase/LRE-like region CIW71_20845 PF00793 DAHP synthetase I family CIW71_20860 PF00118 TCP-1/cpn60 chaperonin family CIW71_20865 PF00166 Chaperonin 10 Kd subunit CIW71_20875 PF04231 Endonuclease I CIW71_20880 PF00106 short chain dehydrogenase CIW71_20895 PF01852 START domain CIW71_20910 PF03091 CutA1 divalent ion tolerance protein CIW71_20915 PF11412 Disulphide bond corrector protein DsbC CIW71_20915 PF02683 Cytochrome C biogenesis protein transmembrane region CIW71_20920 PF01220 Dehydroquinase class II CIW71_20925 PF00364 Biotin-requiring enzyme CIW71_20935 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CIW71_20935 PF00289 Biotin carboxylase, N-terminal domain CIW71_20935 PF02785 Biotin carboxylase C-terminal domain CIW71_20975 PF01381 Helix-turn-helix CIW71_20990 PF02954 Bacterial regulatory protein, Fis family CIW71_21020 PF00782 Dual specificity phosphatase, catalytic domain CIW71_21025 PF12147 Putative methyltransferase CIW71_21025 PF12146 Serine aminopeptidase, S33 CIW71_21030 PF01066 CDP-alcohol phosphatidyltransferase CIW71_21035 PF02142 MGS-like domain CIW71_21035 PF01808 AICARFT/IMPCHase bienzyme CIW71_21045 PF02844 Phosphoribosylglycinamide synthetase, N domain CIW71_21045 PF02843 Phosphoribosylglycinamide synthetase, C domain CIW71_21045 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CIW71_21055 PF12805 FUSC-like inner membrane protein yccS CIW71_21060 PF07690 Major Facilitator Superfamily CIW71_21070 PF07690 Major Facilitator Superfamily CIW71_21090 PF17113 Regulatory signalling modulator protein AmpE CIW71_21090 PF03186 CobD/Cbib protein CIW71_21095 PF09297 NADH pyrophosphatase zinc ribbon domain CIW71_21095 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain CIW71_21095 PF00293 NUDIX domain CIW71_21110 PF01521 Iron-sulphur cluster biosynthesis CIW71_21130 PF00486 Transcriptional regulatory protein, C terminal CIW71_21130 PF00072 Response regulator receiver domain CIW71_21135 PF01627 Hpt domain CIW71_21135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_21135 PF00512 His Kinase A (phospho-acceptor) domain CIW71_21135 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CIW71_21135 PF00672 HAMP domain CIW71_21135 PF00072 Response regulator receiver domain CIW71_21140 PF00210 Ferritin-like domain CIW71_21150 PF00293 NUDIX domain CIW71_21165 PF00380 Ribosomal protein S9/S16 CIW71_21170 PF00572 Ribosomal protein L13 CIW71_21175 PF03232 Ubiquinone biosynthesis protein COQ7 CIW71_21180 PF00893 Small Multidrug Resistance protein CIW71_21185 PF02675 S-adenosylmethionine decarboxylase CIW71_21190 PF00027 Cyclic nucleotide-binding domain CIW71_21190 PF00325 Bacterial regulatory proteins, crp family CIW71_21200 PF00218 Indole-3-glycerol phosphate synthase CIW71_21205 PF00591 Glycosyl transferase family, a/b domain CIW71_21205 PF02885 Glycosyl transferase family, helical bundle domain CIW71_21215 PF00117 Glutamine amidotransferase class-I CIW71_21225 PF00425 chorismate binding enzyme CIW71_21225 PF04715 Anthranilate synthase component I, N terminal region CIW71_21230 PF00781 Diacylglycerol kinase catalytic domain CIW71_21235 PF00583 Acetyltransferase (GNAT) family CIW71_21240 PF00834 Ribulose-phosphate 3 epimerase family CIW71_21250 PF00226 DnaJ domain CIW71_21250 PF05099 Tellurite resistance protein TerB CIW71_21255 PF01259 SAICAR synthetase CIW71_21275 PF00182 Chitinase class I CIW71_21280 PF01483 Proprotein convertase P-domain CIW71_21280 PF01447 Thermolysin metallopeptidase, catalytic domain CIW71_21280 PF02868 Thermolysin metallopeptidase, alpha-helical domain CIW71_21280 PF07504 Fungalysin/Thermolysin Propeptide Motif CIW71_21295 PF00361 Proton-conducting membrane transporter CIW71_21295 PF13244 Domain of unknown function (DUF4040) CIW71_21295 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CIW71_21295 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CIW71_21300 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CIW71_21305 PF00361 Proton-conducting membrane transporter CIW71_21315 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CIW71_21320 PF03334 Na+/H+ antiporter subunit CIW71_21340 PF04209 homogentisate 1,2-dioxygenase CIW71_21345 PF04480 Protein of unknown function (DUF559) CIW71_21350 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CIW71_21355 PF01047 MarR family CIW71_21365 PF00854 POT family CIW71_21370 PF03301 Tryptophan 2,3-dioxygenase CIW71_21380 PF00676 Dehydrogenase E1 component CIW71_21385 PF02779 Transketolase, pyrimidine binding domain CIW71_21385 PF02780 Transketolase, C-terminal domain CIW71_21395 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CIW71_21395 PF00364 Biotin-requiring enzyme CIW71_21395 PF02817 e3 binding domain CIW71_21400 PF00270 DEAD/DEAH box helicase CIW71_21400 PF00271 Helicase conserved C-terminal domain CIW71_21415 PF00873 AcrB/AcrD/AcrF family CIW71_21435 PF06903 VirK protein CIW71_21455 PF13460 NAD(P)H-binding CIW71_21460 PF00128 Alpha amylase, catalytic domain CIW71_21460 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CIW71_21470 PF00128 Alpha amylase, catalytic domain CIW71_21475 PF02446 4-alpha-glucanotransferase CIW71_21480 PF00128 Alpha amylase, catalytic domain CIW71_21480 PF11941 Domain of unknown function (DUF3459) CIW71_21480 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CIW71_21485 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CIW71_21485 PF00128 Alpha amylase, catalytic domain CIW71_21485 PF02806 Alpha amylase, C-terminal all-beta domain CIW71_21490 PF08323 Starch synthase catalytic domain CIW71_21490 PF00534 Glycosyl transferases group 1 CIW71_21495 PF00072 Response regulator receiver domain CIW71_21495 PF00990 Diguanylate cyclase, GGDEF domain CIW71_21500 PF05661 Protein of unknown function (DUF808) CIW71_21505 PF03109 ABC1 family CIW71_21515 PF00884 Sulfatase CIW71_21520 PF12794 Mechanosensitive ion channel inner membrane domain 1 CIW71_21520 PF00924 Mechanosensitive ion channel CIW71_21520 PF12795 Mechanosensitive ion channel porin domain CIW71_21535 PF01464 Transglycosylase SLT domain CIW71_21550 PF01311 Bacterial export proteins, family 1 CIW71_21560 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CIW71_21560 PF02874 ATP synthase alpha/beta family, beta-barrel domain CIW71_21560 PF18269 T3SS EscN ATPase C-terminal domain CIW71_21575 PF01514 Secretory protein of YscJ/FliF family CIW71_21590 PF01312 FlhB HrpN YscU SpaS Family CIW71_21595 PF00771 FHIPEP family CIW71_21610 PF00813 FliP family CIW71_21615 PF01313 Bacterial export proteins, family 3 CIW71_21650 PF05819 NolX protein CIW71_21670 PF01040 UbiA prenyltransferase family CIW71_21680 PF06968 Biotin and Thiamin Synthesis associated domain CIW71_21680 PF04055 Radical SAM superfamily CIW71_21685 PF00155 Aminotransferase class I and II CIW71_21695 PF12697 Alpha/beta hydrolase family CIW71_21705 PF13649 Methyltransferase domain CIW71_21725 PF00291 Pyridoxal-phosphate dependent enzyme CIW71_21735 PF01134 Glucose inhibited division protein A CIW71_21735 PF13932 GidA associated domain CIW71_21740 PF10677 Protein of unknown function (DUF2490) CIW71_21755 PF01614 Bacterial transcriptional regulator CIW71_21755 PF09339 IclR helix-turn-helix domain CIW71_21765 PF02627 Carboxymuconolactone decarboxylase family CIW71_21770 PF12146 Serine aminopeptidase, S33 CIW71_21775 PF10397 Adenylosuccinate lyase C-terminus CIW71_21775 PF00206 Lyase CIW71_21780 PF00775 Dioxygenase CIW71_21780 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal CIW71_21790 PF02803 Thiolase, C-terminal domain CIW71_21790 PF00108 Thiolase, N-terminal domain CIW71_21795 PF01144 Coenzyme A transferase CIW71_21800 PF01144 Coenzyme A transferase CIW71_21805 PF00355 Rieske [2Fe-2S] domain CIW71_21815 PF00455 DeoR C terminal sensor domain CIW71_21815 PF08220 DeoR-like helix-turn-helix domain CIW71_21820 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CIW71_21820 PF01266 FAD dependent oxidoreductase CIW71_21825 PF00230 Major intrinsic protein CIW71_21830 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CIW71_21830 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CIW71_21845 PF01494 FAD binding domain CIW71_21855 PF00171 Aldehyde dehydrogenase family CIW71_21875 PF11871 Domain of unknown function (DUF3391) CIW71_21875 PF01966 HD domain CIW71_21880 PF07690 Major Facilitator Superfamily CIW71_21890 PF00132 Bacterial transferase hexapeptide (six repeats) CIW71_21905 PF00920 Dehydratase family CIW71_21910 PF13495 Phage integrase, N-terminal SAM-like domain CIW71_21910 PF00589 Phage integrase family CIW71_21960 PF01638 HxlR-like helix-turn-helix CIW71_21965 PF05368 NmrA-like family CIW71_21980 PF03812 2-keto-3-deoxygluconate permease CIW71_21985 PF08267 Cobalamin-independent synthase, N-terminal domain CIW71_21985 PF01717 Cobalamin-independent synthase, Catalytic domain CIW71_21995 PF03358 NADPH-dependent FMN reductase CIW71_22000 PF03466 LysR substrate binding domain CIW71_22000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW71_22005 PF02677 Epoxyqueuosine reductase QueH CIW71_22020 PF02321 Outer membrane efflux protein CIW71_22030 PF00529 HlyD membrane-fusion protein of T1SS CIW71_22030 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CIW71_22035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_22035 PF00672 HAMP domain CIW71_22035 PF00512 His Kinase A (phospho-acceptor) domain CIW71_22040 PF00072 Response regulator receiver domain CIW71_22040 PF00486 Transcriptional regulatory protein, C terminal CIW71_22045 PF00551 Formyl transferase CIW71_22055 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CIW71_22055 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CIW71_22060 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CIW71_22065 PF02146 Sir2 family CIW71_22080 PF07690 Major Facilitator Superfamily CIW71_22115 PF01026 TatD related DNase CIW71_22120 PF03466 LysR substrate binding domain CIW71_22120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW71_22125 PF00355 Rieske [2Fe-2S] domain CIW71_22130 PF00111 2Fe-2S iron-sulfur cluster binding domain CIW71_22140 PF00860 Permease family CIW71_22150 PF01156 Inosine-uridine preferring nucleoside hydrolase CIW71_22155 PF01425 Amidase CIW71_22170 PF07690 Major Facilitator Superfamily CIW71_22175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW71_22175 PF03466 LysR substrate binding domain CIW71_22180 PF01546 Peptidase family M20/M25/M40 CIW71_22180 PF07687 Peptidase dimerisation domain CIW71_22185 PF00266 Aminotransferase class-V CIW71_22200 PF09349 OHCU decarboxylase CIW71_22200 PF01014 Uricase CIW71_22205 PF13454 FAD-NAD(P)-binding CIW71_22210 PF00576 HIUase/Transthyretin family CIW71_22215 PF07308 Protein of unknown function (DUF1456) CIW71_22225 PF00270 DEAD/DEAH box helicase CIW71_22225 PF04408 Helicase associated domain (HA2) CIW71_22225 PF08482 ATP-dependent helicase C-terminal CIW71_22225 PF00271 Helicase conserved C-terminal domain CIW71_22235 PF00593 TonB dependent receptor CIW71_22240 PF00849 RNA pseudouridylate synthase CIW71_22255 PF16884 N-terminal domain of oxidoreductase CIW71_22255 PF00107 Zinc-binding dehydrogenase CIW71_22285 PF02566 OsmC-like protein CIW71_22290 PF01047 MarR family CIW71_22295 PF03969 AFG1-like ATPase CIW71_22370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CIW71_22370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CIW71_22370 PF02770 Acyl-CoA dehydrogenase, middle domain CIW71_22375 PF01039 Carboxyl transferase domain CIW71_22380 PF00289 Biotin carboxylase, N-terminal domain CIW71_22380 PF00364 Biotin-requiring enzyme CIW71_22380 PF02785 Biotin carboxylase C-terminal domain CIW71_22380 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CIW71_22385 PF00326 Prolyl oligopeptidase family CIW71_22405 PF00990 Diguanylate cyclase, GGDEF domain CIW71_22410 PF00463 Isocitrate lyase family CIW71_22415 PF01274 Malate synthase CIW71_22425 PF00999 Sodium/hydrogen exchanger family CIW71_22450 PF12706 Beta-lactamase superfamily domain CIW71_22455 PF01432 Peptidase family M3 CIW71_22460 PF01112 Asparaginase CIW71_22470 PF00472 RF-1 domain CIW71_22480 PF00849 RNA pseudouridylate synthase CIW71_22490 PF03109 ABC1 family CIW71_22500 PF07478 D-ala D-ala ligase C-terminus CIW71_22500 PF01820 D-ala D-ala ligase N-terminus CIW71_22515 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family CIW71_22525 PF00501 AMP-binding enzyme CIW71_22530 PF03692 Putative zinc- or iron-chelating domain CIW71_22535 PF00561 alpha/beta hydrolase fold CIW71_22545 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CIW71_22545 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CIW71_22560 PF00588 SpoU rRNA Methylase family CIW71_22565 PF07690 Major Facilitator Superfamily CIW71_22580 PF00072 Response regulator receiver domain CIW71_22580 PF02954 Bacterial regulatory protein, Fis family CIW71_22580 PF00158 Sigma-54 interaction domain CIW71_22585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_22590 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CIW71_22590 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CIW71_22590 PF00205 Thiamine pyrophosphate enzyme, central domain CIW71_22605 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CIW71_22605 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CIW71_22610 PF02556 Preprotein translocase subunit SecB CIW71_22615 PF00581 Rhodanese-like domain CIW71_22650 PF00108 Thiolase, N-terminal domain CIW71_22650 PF02803 Thiolase, C-terminal domain CIW71_22665 PF00080 Copper/zinc superoxide dismutase (SODC) CIW71_22670 PF00080 Copper/zinc superoxide dismutase (SODC) CIW71_22675 PF00158 Sigma-54 interaction domain CIW71_22675 PF00072 Response regulator receiver domain CIW71_22675 PF02954 Bacterial regulatory protein, Fis family CIW71_22680 PF00512 His Kinase A (phospho-acceptor) domain CIW71_22680 PF00989 PAS fold CIW71_22680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_22685 PF00909 Ammonium Transporter Family CIW71_22690 PF00543 Nitrogen regulatory protein P-II CIW71_22695 PF03951 Glutamine synthetase, beta-Grasp domain CIW71_22695 PF00120 Glutamine synthetase, catalytic domain CIW71_22700 PF02673 Bacitracin resistance protein BacA CIW71_22710 PF01161 Phosphatidylethanolamine-binding protein CIW71_22735 PF03061 Thioesterase superfamily CIW71_22740 PF13091 PLD-like domain CIW71_22755 PF01883 Iron-sulfur cluster assembly protein CIW71_22755 PF10609 NUBPL iron-transfer P-loop NTPase CIW71_22780 PF01381 Helix-turn-helix CIW71_22800 PF03781 Sulfatase-modifying factor enzyme 1 CIW71_22800 PF12867 DinB superfamily CIW71_22810 PF00528 Binding-protein-dependent transport system inner membrane component CIW71_22815 PF00005 ABC transporter CIW71_22830 PF00005 ABC transporter CIW71_22840 PF01734 Patatin-like phospholipase CIW71_22845 PF07660 Secretin and TonB N terminus short domain CIW71_22845 PF07715 TonB-dependent Receptor Plug Domain CIW71_22845 PF00593 TonB dependent receptor CIW71_22850 PF01037 Lrp/AsnC ligand binding domain CIW71_22855 PF00351 Biopterin-dependent aromatic amino acid hydroxylase CIW71_22870 PF00657 GDSL-like Lipase/Acylhydrolase CIW71_22885 PF04962 KduI/IolB family CIW71_22895 PF00356 Bacterial regulatory proteins, lacI family CIW71_22900 PF04616 Glycosyl hydrolases family 43 CIW71_22900 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CIW71_22905 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CIW71_22915 PF03480 Bacterial extracellular solute-binding protein, family 7 CIW71_22925 PF13472 GDSL-like Lipase/Acylhydrolase family CIW71_22925 PF07859 alpha/beta hydrolase fold CIW71_22930 PF00135 Carboxylesterase family CIW71_22935 PF00248 Aldo/keto reductase family CIW71_22945 PF03377 TAL effector repeat CIW71_22970 PF04357 TamB, inner membrane protein subunit of TAM complex CIW71_22975 PF17243 POTRA domain TamA domain 1 CIW71_22975 PF01103 Surface antigen CIW71_22980 PF00593 TonB dependent receptor CIW71_22980 PF07715 TonB-dependent Receptor Plug Domain CIW71_22985 PF13181 Tetratricopeptide repeat CIW71_22990 PF05746 DALR anticodon binding domain CIW71_22990 PF02092 Glycyl-tRNA synthetase beta subunit CIW71_22995 PF02091 Glycyl-tRNA synthetase alpha subunit CIW71_23000 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CIW71_23000 PF00437 Type II/IV secretion system protein CIW71_23015 PF00958 GMP synthase C terminal domain CIW71_23015 PF00117 Glutamine amidotransferase class-I CIW71_23025 PF00902 Sec-independent protein translocase protein (TatC) CIW71_23030 PF02416 mttA/Hcf106 family CIW71_23035 PF02416 mttA/Hcf106 family CIW71_23045 PF00762 Ferrochelatase CIW71_23050 PF12697 Alpha/beta hydrolase family CIW71_23070 PF04381 Putative exonuclease, RdgC CIW71_23075 PF01171 PP-loop family CIW71_23090 PF00356 Bacterial regulatory proteins, lacI family CIW71_23095 PF07477 Glycosyl hydrolase family 67 C-terminus CIW71_23095 PF07488 Glycosyl hydrolase family 67 middle domain CIW71_23095 PF03648 Glycosyl hydrolase family 67 N-terminus CIW71_23105 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CIW71_23105 PF13378 Enolase C-terminal domain-like CIW71_23110 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CIW71_23110 PF04616 Glycosyl hydrolases family 43 CIW71_23120 PF01232 Mannitol dehydrogenase Rossmann domain CIW71_23120 PF08125 Mannitol dehydrogenase C-terminal domain CIW71_23170 PF00202 Aminotransferase class-III CIW71_23180 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CIW71_23180 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CIW71_23200 PF08450 SMP-30/Gluconolactonase/LRE-like region CIW71_23205 PF00331 Glycosyl hydrolase family 10 CIW71_23210 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CIW71_23210 PF00703 Glycosyl hydrolases family 2 CIW71_23210 PF16355 Domain of unknown function (DUF4982) CIW71_23210 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 CIW71_23210 PF02837 Glycosyl hydrolases family 2, sugar binding domain CIW71_23215 PF02614 Glucuronate isomerase CIW71_23230 PF00553 Cellulose binding domain CIW71_23230 PF00331 Glycosyl hydrolase family 10 CIW71_23230 PF03422 Carbohydrate binding module (family 6) CIW71_23250 PF04616 Glycosyl hydrolases family 43 CIW71_23315 PF00109 Beta-ketoacyl synthase, N-terminal domain CIW71_23315 PF16197 Ketoacyl-synthetase C-terminal extension CIW71_23315 PF08659 KR domain CIW71_23315 PF14765 Polyketide synthase dehydratase CIW71_23315 PF00550 Phosphopantetheine attachment site CIW71_23315 PF08240 Alcohol dehydrogenase GroES-like domain CIW71_23315 PF00698 Acyl transferase domain CIW71_23315 PF00107 Zinc-binding dehydrogenase CIW71_23315 PF02801 Beta-ketoacyl synthase, C-terminal domain CIW71_23320 PF01553 Acyltransferase CIW71_23335 PF00356 Bacterial regulatory proteins, lacI family CIW71_23350 PF04820 Tryptophan halogenase CIW71_23355 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CIW71_23360 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) CIW71_23370 PF04337 Protein of unknown function, DUF480 CIW71_23380 PF13302 Acetyltransferase (GNAT) domain CIW71_23385 PF13361 UvrD-like helicase C-terminal domain CIW71_23385 PF00580 UvrD/REP helicase N-terminal domain CIW71_23390 PF00265 Thymidine kinase CIW71_23395 PF00360 Phytochrome region CIW71_23395 PF00512 His Kinase A (phospho-acceptor) domain CIW71_23395 PF08446 PAS fold CIW71_23395 PF01590 GAF domain CIW71_23395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW71_23400 PF04349 Periplasmic glucan biosynthesis protein, MdoG CIW71_23410 PF06827 Zinc finger found in FPG and IleRS CIW71_23410 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CIW71_23410 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CIW71_23440 PF03594 Benzoate membrane transport protein CIW71_23445 PF08446 PAS fold CIW71_23445 PF00360 Phytochrome region CIW71_23445 PF01590 GAF domain CIW71_23445 PF13426 PAS domain CIW71_23450 PF01126 Heme oxygenase CIW71_23455 PF07690 Major Facilitator Superfamily CIW71_23460 PF01263 Aldose 1-epimerase CIW71_23470 PF02810 SEC-C motif CIW71_23475 PF01925 Sulfite exporter TauE/SafE CIW71_23495 PF01227 GTP cyclohydrolase I CIW71_23505 PF07869 Protein of unknown function (DUF1656) CIW71_23510 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CIW71_23510 PF00529 HlyD membrane-fusion protein of T1SS CIW71_23515 PF02321 Outer membrane efflux protein CIW71_23520 PF04632 Fusaric acid resistance protein family CIW71_23535 PF13396 Phospholipase_D-nuclease N-terminal CIW71_23535 PF13091 PLD-like domain CIW71_23595 PF00849 RNA pseudouridylate synthase CIW71_23605 PF02785 Biotin carboxylase C-terminal domain CIW71_23605 PF00289 Biotin carboxylase, N-terminal domain CIW71_23605 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CIW71_23610 PF01425 Amidase CIW71_23645 PF13538 UvrD-like helicase C-terminal domain CIW71_23650 PF00580 UvrD/REP helicase N-terminal domain CIW71_23650 PF12705 PD-(D/E)XK nuclease superfamily CIW71_23650 PF13361 UvrD-like helicase C-terminal domain CIW71_23655 PF17946 RecC C-terminal domain CIW71_23670 PF00005 ABC transporter CIW71_23675 PF02405 Permease MlaE CIW71_23680 PF02470 MlaD protein CIW71_23685 PF05494 MlaC protein CIW71_23695 PF04333 MlaA lipoprotein CIW71_23705 PF00255 Glutathione peroxidase CIW71_23715 PF02646 RmuC family CIW71_23720 PF08240 Alcohol dehydrogenase GroES-like domain CIW71_23720 PF00107 Zinc-binding dehydrogenase CIW71_23725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW71_23725 PF03466 LysR substrate binding domain CIW71_23740 PF13417 Glutathione S-transferase, N-terminal domain CIW71_23740 PF00043 Glutathione S-transferase, C-terminal domain CIW71_23750 PF13520 Amino acid permease CIW71_23755 PF07971 Glycosyl hydrolase family 92 CIW71_23755 PF17678 Glycosyl hydrolase family 92 N-terminal domain CIW71_23765 PF10947 Protein of unknown function (DUF2628) CIW71_23770 PF00990 Diguanylate cyclase, GGDEF domain CIW71_23795 PF10672 S-adenosylmethionine-dependent methyltransferase CIW71_23795 PF17785 PUA-like domain CIW71_23805 PF03741 Integral membrane protein TerC family CIW71_23815 PF01694 Rhomboid family CIW71_23820 PF03009 Glycerophosphoryl diester phosphodiesterase family CIW71_23830 PF01569 PAP2 superfamily CIW71_23835 PF01926 50S ribosome-binding GTPase CIW71_23835 PF12631 MnmE helical domain CIW71_23835 PF10396 GTP-binding protein TrmE N-terminus CIW71_23840 PF01522 Polysaccharide deacetylase CIW71_23845 PF02096 60Kd inner membrane protein CIW71_23845 PF14849 YidC periplasmic domain CIW71_23850 PF00825 Ribonuclease P CIW71_23855 PF00468 Ribosomal protein L34 CIW71_23865 PF01527 Transposase CIW71_23875 PF13700 Domain of unknown function (DUF4158) CIW71_23875 PF01526 Tn3 transposase DDE domain CIW71_23890 PF00239 Resolvase, N terminal domain CIW71_23890 PF02796 Helix-turn-helix domain of resolvase CIW71_23905 PF13406 Transglycosylase SLT domain CIW71_23915 PF03377 TAL effector repeat CIW71_23930 PF03377 TAL effector repeat CIW71_23940 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CIW71_23980 PF13700 Domain of unknown function (DUF4158) CIW71_23980 PF01526 Tn3 transposase DDE domain CIW71_24010 PF13614 AAA domain CIW71_24035 PF07057 DNA helicase TraI CIW71_24035 PF18340 DNA relaxase TraI 2B/2B-like domain CIW71_24035 PF08751 TrwC relaxase CIW71_24035 PF07057 DNA helicase TraI CIW71_24035 PF18340 DNA relaxase TraI 2B/2B-like domain CIW71_24035 PF18272 single-stranded DNA binding TraI N-terminal subdomain CIW71_24035 PF08751 TrwC relaxase CIW71_24035 PF18272 single-stranded DNA binding TraI N-terminal subdomain CIW71_24055 PF03377 TAL effector repeat CIW71_24075 PF02796 Helix-turn-helix domain of resolvase CIW71_24075 PF00665 Integrase core domain CIW71_24080 PF01695 IstB-like ATP binding protein CIW71_24130 PF13614 AAA domain CIW71_24165 PF03377 TAL effector repeat CIW71_24175 PF01695 IstB-like ATP binding protein CIW71_24180 PF02796 Helix-turn-helix domain of resolvase CIW71_24180 PF00665 Integrase core domain CIW71_24230 PF03377 TAL effector repeat CIW71_24250 PF00239 Resolvase, N terminal domain CIW71_24250 PF02796 Helix-turn-helix domain of resolvase CIW71_24270 PF00376 MerR family regulatory protein CIW71_24270 PF13614 AAA domain CIW71_24280 PF03377 TAL effector repeat CIW71_24290 PF03377 TAL effector repeat CIW71_24320 PF07015 VirC1 protein CIW71_24370 PF03524 Conjugal transfer protein CIW71_24375 PF03743 Bacterial conjugation TrbI-like protein CIW71_24380 PF00437 Type II/IV secretion system protein CIW71_24385 PF01464 Transglycosylase SLT domain CIW71_24395 PF13091 PLD-like domain CIW71_24455 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ CIW71_24460 PF04221 RelB antitoxin CIW71_24465 PF00239 Resolvase, N terminal domain CIW71_24465 PF02796 Helix-turn-helix domain of resolvase CIW71_24480 PF13614 AAA domain CIW71_24650 PF00356 Bacterial regulatory proteins, lacI family