locus-tag class description LPY95_00005 PF00308 Bacterial dnaA protein LPY95_00005 PF08299 Bacterial dnaA protein helix-turn-helix LPY95_00005 PF11638 DnaA N-terminal domain LPY95_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain LPY95_00010 PF02767 DNA polymerase III beta subunit, central domain LPY95_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain LPY95_00015 PF02463 RecF/RecN/SMC N terminal domain LPY95_00020 PF00204 DNA gyrase B LPY95_00020 PF00986 DNA gyrase B subunit, carboxyl terminus LPY95_00020 PF18053 DNA gyrase B subunit insert domain LPY95_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_00020 PF01751 Toprim domain LPY95_00030 PF01435 Peptidase family M48 LPY95_00040 PF03544 Gram-negative bacterial TonB protein C-terminal LPY95_00045 PF01618 MotA/TolQ/ExbB proton channel family LPY95_00050 PF02472 Biopolymer transport protein ExbD/TolR LPY95_00055 PF02472 Biopolymer transport protein ExbD/TolR LPY95_00060 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LPY95_00105 PF04002 RadC-like JAB domain LPY95_00135 PF01695 IstB-like ATP binding protein LPY95_00140 PF00665 Integrase core domain LPY95_00140 PF02796 Helix-turn-helix domain of resolvase LPY95_00190 PF03572 Peptidase family S41 LPY95_00190 PF13180 PDZ domain LPY95_00195 PF01551 Peptidase family M23 LPY95_00205 PF04389 Peptidase family M28 LPY95_00215 PF00150 Cellulase (glycosyl hydrolase family 5) LPY95_00225 PF00150 Cellulase (glycosyl hydrolase family 5) LPY95_00230 PF00150 Cellulase (glycosyl hydrolase family 5) LPY95_00235 PF00107 Zinc-binding dehydrogenase LPY95_00235 PF08240 Alcohol dehydrogenase GroES-like domain LPY95_00250 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPY95_00250 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LPY95_00255 PF01493 GXGXG motif LPY95_00255 PF01645 Conserved region in glutamate synthase LPY95_00255 PF04898 Glutamate synthase central domain LPY95_00255 PF00310 Glutamine amidotransferases class-II LPY95_00305 PF02397 Bacterial sugar transferase LPY95_00310 PF02350 UDP-N-acetylglucosamine 2-epimerase LPY95_00320 PF03808 Glycosyl transferase WecB/TagA/CpsF family LPY95_00325 PF13439 Glycosyltransferase Family 4 LPY95_00325 PF00534 Glycosyl transferases group 1 LPY95_00345 PF00733 Asparagine synthase LPY95_00345 PF13537 Glutamine amidotransferase domain LPY95_00360 PF16363 GDP-mannose 4,6 dehydratase LPY95_00375 PF00005 ABC transporter LPY95_00375 PF00664 ABC transporter transmembrane region LPY95_00385 PF13537 Glutamine amidotransferase domain LPY95_00385 PF00733 Asparagine synthase LPY95_00405 PF02603 HPr Serine kinase N terminus LPY95_00405 PF07475 HPr Serine kinase C-terminal domain LPY95_00410 PF00685 Sulfotransferase domain LPY95_00490 PF09369 Domain of unknown function (DUF1998) LPY95_00490 PF00270 DEAD/DEAH box helicase LPY95_00490 PF00271 Helicase conserved C-terminal domain LPY95_00495 PF03006 Haemolysin-III related LPY95_00525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPY95_00525 PF03466 LysR substrate binding domain LPY95_00565 PF00294 pfkB family carbohydrate kinase LPY95_00575 PF07055 Enoyl reductase FAD binding domain LPY95_00575 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase LPY95_00575 PF12241 Trans-2-enoyl-CoA reductase catalytic region LPY95_00580 PF18500 CadC C-terminal domain 1 LPY95_00580 PF00486 Transcriptional regulatory protein, C terminal LPY95_00600 PF00196 Bacterial regulatory proteins, luxR family LPY95_00600 PF00072 Response regulator receiver domain LPY95_00605 PF07730 Histidine kinase LPY95_00610 PF00144 Beta-lactamase LPY95_00615 PF01070 FMN-dependent dehydrogenase LPY95_00620 PF02735 Ku70/Ku80 beta-barrel domain LPY95_00665 PF07883 Cupin domain LPY95_00675 PF07715 TonB-dependent Receptor Plug Domain LPY95_00675 PF00593 TonB dependent receptor LPY95_00680 PF00155 Aminotransferase class I and II LPY95_00685 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LPY95_00715 PF07726 ATPase family associated with various cellular activities (AAA) LPY95_00715 PF17863 AAA lid domain LPY95_00760 PF00085 Thioredoxin LPY95_00780 PF00293 NUDIX domain LPY95_00780 PF13344 Haloacid dehalogenase-like hydrolase LPY95_00815 PF00128 Alpha amylase, catalytic domain LPY95_00815 PF11896 Domain of unknown function (DUF3416) LPY95_00820 PF00128 Alpha amylase, catalytic domain LPY95_00820 PF16657 Maltogenic Amylase, C-terminal domain LPY95_00825 PF00128 Alpha amylase, catalytic domain LPY95_00825 PF02806 Alpha amylase, C-terminal all-beta domain LPY95_00825 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LPY95_00835 PF03377 TAL effector repeat LPY95_00845 PF03377 TAL effector repeat LPY95_00895 PF04610 TrbL/VirB6 plasmid conjugal transfer protein LPY95_00905 PF03524 Conjugal transfer protein LPY95_00910 PF03743 Bacterial conjugation TrbI-like protein LPY95_00915 PF00437 Type II/IV secretion system protein LPY95_00920 PF01464 Transglycosylase SLT domain LPY95_00930 PF13091 PLD-like domain LPY95_01000 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ LPY95_01005 PF04221 RelB antitoxin LPY95_01010 PF00239 Resolvase, N terminal domain LPY95_01010 PF02796 Helix-turn-helix domain of resolvase LPY95_01025 PF13614 AAA domain LPY95_01030 PF03377 TAL effector repeat LPY95_01050 PF13570 PQQ-like domain LPY95_01050 PF13360 PQQ-like domain LPY95_01050 PF01011 PQQ enzyme repeat LPY95_01065 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain LPY95_01065 PF06165 Glycosyltransferase family 36 LPY95_01075 PF00512 His Kinase A (phospho-acceptor) domain LPY95_01075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_01080 PF02659 Putative manganese efflux pump LPY95_01085 PF09339 IclR helix-turn-helix domain LPY95_01085 PF01614 Bacterial transcriptional regulator LPY95_01090 PF07690 Major Facilitator Superfamily LPY95_01095 PF05336 L-rhamnose mutarotase LPY95_01100 PF13378 Enolase C-terminal domain-like LPY95_01100 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LPY95_01105 PF01557 Fumarylacetoacetate (FAA) hydrolase family LPY95_01120 PF00248 Aldo/keto reductase family LPY95_01150 PF00196 Bacterial regulatory proteins, luxR family LPY95_01150 PF00072 Response regulator receiver domain LPY95_01155 PF16177 Acetyl-coenzyme A synthetase N-terminus LPY95_01155 PF00501 AMP-binding enzyme LPY95_01155 PF13193 AMP-binding enzyme C-terminal domain LPY95_01165 PF04341 Protein of unknown function, DUF485 LPY95_01170 PF00474 Sodium:solute symporter family LPY95_01180 PF09312 SurA N-terminal domain LPY95_01180 PF00639 PPIC-type PPIASE domain LPY95_01190 PF00480 ROK family LPY95_01195 PF03372 Endonuclease/Exonuclease/phosphatase family LPY95_01205 PF04226 Transglycosylase associated protein LPY95_01210 PF01648 4'-phosphopantetheinyl transferase superfamily LPY95_01215 PF09423 PhoD-like phosphatase LPY95_01215 PF16655 PhoD-like phosphatase, N-terminal domain LPY95_01220 PF09423 PhoD-like phosphatase LPY95_01220 PF16655 PhoD-like phosphatase, N-terminal domain LPY95_01225 PF02527 rRNA small subunit methyltransferase G LPY95_01245 PF13533 Biotin-lipoyl like LPY95_01255 PF00873 AcrB/AcrD/AcrF family LPY95_01260 PF00830 Ribosomal L28 family LPY95_01265 PF00471 Ribosomal protein L33 LPY95_01270 PF04909 Amidohydrolase LPY95_01275 PF04303 PrpF protein LPY95_01280 PF03737 Aldolase/RraA LPY95_01285 PF03466 LysR substrate binding domain LPY95_01285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPY95_01290 PF13091 PLD-like domain LPY95_01290 PF13396 Phospholipase_D-nuclease N-terminal LPY95_01300 PF00580 UvrD/REP helicase N-terminal domain LPY95_01300 PF13361 UvrD-like helicase C-terminal domain LPY95_01310 PF14602 Hexapeptide repeat of succinyl-transferase LPY95_01310 PF12464 Maltose acetyltransferase LPY95_01325 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 LPY95_01330 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath LPY95_01335 PF05638 Type VI secretion system effector, Hcp LPY95_01340 PF07024 ImpE protein LPY95_01345 PF04965 Gene 25-like lysozyme LPY95_01350 PF05947 Type VI secretion system, TssF LPY95_01360 PF10431 C-terminal, D2-small domain, of ClpB protein LPY95_01360 PF17871 AAA lid domain LPY95_01360 PF07724 AAA domain (Cdc48 subfamily) LPY95_01360 PF00004 ATPase family associated with various cellular activities (AAA) LPY95_01400 PF00328 Histidine phosphatase superfamily (branch 2) LPY95_01415 PF08281 Sigma-70, region 4 LPY95_01415 PF04542 Sigma-70 region 2 LPY95_01425 PF00069 Protein kinase domain LPY95_01425 PF03793 PASTA domain LPY95_01435 PF13649 Methyltransferase domain LPY95_01440 PF04717 Type VI secretion system, phage-baseplate injector LPY95_01455 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE LPY95_01480 PF03793 PASTA domain LPY95_01480 PF00069 Protein kinase domain LPY95_01500 PF06812 ImpA, N-terminal, type VI secretion system LPY95_01510 PF01367 5'-3' exonuclease, C-terminal SAM fold LPY95_01510 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LPY95_01510 PF00476 DNA polymerase family A LPY95_01510 PF01612 3'-5' exonuclease LPY95_01515 PF01218 Coproporphyrinogen III oxidase LPY95_01530 PF07676 WD40-like Beta Propeller Repeat LPY95_01530 PF00326 Prolyl oligopeptidase family LPY95_01545 PF04820 Tryptophan halogenase LPY95_01550 PF00550 Phosphopantetheine attachment site LPY95_01560 PF01553 Acyltransferase LPY95_01620 PF00535 Glycosyl transferase family 2 LPY95_01630 PF02801 Beta-ketoacyl synthase, C-terminal domain LPY95_01630 PF00109 Beta-ketoacyl synthase, N-terminal domain LPY95_01635 PF05166 YcgL domain LPY95_01650 PF00723 Glycosyl hydrolases family 15 LPY95_01655 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LPY95_01655 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LPY95_01660 PF00999 Sodium/hydrogen exchanger family LPY95_01660 PF02254 TrkA-N domain LPY95_01665 PF00194 Eukaryotic-type carbonic anhydrase LPY95_01670 PF03448 MgtE intracellular N domain LPY95_01670 PF01769 Divalent cation transporter LPY95_01670 PF00571 CBS domain LPY95_01685 PF00317 Ribonucleotide reductase, all-alpha domain LPY95_01685 PF02867 Ribonucleotide reductase, barrel domain LPY95_01685 PF03477 ATP cone domain LPY95_01690 PF00268 Ribonucleotide reductase, small chain LPY95_01725 PF02558 Ketopantoate reductase PanE/ApbA LPY95_01725 PF08546 Ketopantoate reductase PanE/ApbA C terminal LPY95_01735 PF01061 ABC-2 type transporter LPY95_01740 PF00005 ABC transporter LPY95_01745 PF00111 2Fe-2S iron-sulfur cluster binding domain LPY95_01745 PF00175 Oxidoreductase NAD-binding domain LPY95_01745 PF00970 Oxidoreductase FAD-binding domain LPY95_01750 PF01965 DJ-1/PfpI family LPY95_01750 PF12833 Helix-turn-helix domain LPY95_01760 PF07715 TonB-dependent Receptor Plug Domain LPY95_01760 PF00593 TonB dependent receptor LPY95_01770 PF16916 Dimerisation domain of Zinc Transporter LPY95_01770 PF01545 Cation efflux family LPY95_01775 PF02583 Metal-sensitive transcriptional repressor LPY95_01780 PF01229 Glycosyl hydrolases family 39 LPY95_01790 PF01381 Helix-turn-helix LPY95_01800 PF00005 ABC transporter LPY95_01815 PF04820 Tryptophan halogenase LPY95_01835 PF00043 Glutathione S-transferase, C-terminal domain LPY95_01835 PF02798 Glutathione S-transferase, N-terminal domain LPY95_01840 PF00326 Prolyl oligopeptidase family LPY95_01840 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region LPY95_01875 PF00490 Delta-aminolevulinic acid dehydratase LPY95_01890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPY95_01890 PF03466 LysR substrate binding domain LPY95_01900 PF00258 Flavodoxin LPY95_01900 PF00667 FAD binding domain LPY95_01900 PF00175 Oxidoreductase NAD-binding domain LPY95_01910 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LPY95_01910 PF01488 Shikimate / quinate 5-dehydrogenase LPY95_01910 PF08501 Shikimate dehydrogenase substrate binding domain LPY95_01925 PF06733 DEAD_2 LPY95_01925 PF13307 Helicase C-terminal domain LPY95_01930 PF00199 Catalase LPY95_01930 PF06628 Catalase-related immune-responsive LPY95_01945 PF01207 Dihydrouridine synthase (Dus) LPY95_01955 PF00072 Response regulator receiver domain LPY95_01955 PF00486 Transcriptional regulatory protein, C terminal LPY95_01960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_01975 PF06167 Glucose-regulated metallo-peptidase M90 LPY95_01985 PF02237 Biotin protein ligase C terminal domain LPY95_01985 PF03099 Biotin/lipoate A/B protein ligase family LPY95_01985 PF08279 HTH domain LPY95_01990 PF03309 Type III pantothenate kinase LPY95_02020 PF02223 Thymidylate kinase LPY95_02045 PF00491 Arginase family LPY95_02060 PF05532 CsbD-like LPY95_02070 PF00753 Metallo-beta-lactamase superfamily LPY95_02085 PF00892 EamA-like transporter family LPY95_02090 PF00892 EamA-like transporter family LPY95_02110 PF00005 ABC transporter LPY95_02115 PF13533 Biotin-lipoyl like LPY95_02120 PF07730 Histidine kinase LPY95_02125 PF00072 Response regulator receiver domain LPY95_02125 PF00196 Bacterial regulatory proteins, luxR family LPY95_02140 PF00199 Catalase LPY95_02145 PF04542 Sigma-70 region 2 LPY95_02145 PF08281 Sigma-70, region 4 LPY95_02155 PF00883 Cytosol aminopeptidase family, catalytic domain LPY95_02155 PF02789 Cytosol aminopeptidase family, N-terminal domain LPY95_02160 PF13419 Haloacid dehalogenase-like hydrolase LPY95_02165 PF01594 AI-2E family transporter LPY95_02185 PF00595 PDZ domain LPY95_02210 PF00512 His Kinase A (phospho-acceptor) domain LPY95_02210 PF08521 Two-component sensor kinase N-terminal LPY95_02210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_02215 PF00072 Response regulator receiver domain LPY95_02215 PF00486 Transcriptional regulatory protein, C terminal LPY95_02220 PF08338 Domain of unknown function (DUF1731) LPY95_02220 PF01370 NAD dependent epimerase/dehydratase family LPY95_02255 PF01139 tRNA-splicing ligase RtcB LPY95_02265 PF00440 Bacterial regulatory proteins, tetR family LPY95_02270 PF00111 2Fe-2S iron-sulfur cluster binding domain LPY95_02270 PF00970 Oxidoreductase FAD-binding domain LPY95_02270 PF00175 Oxidoreductase NAD-binding domain LPY95_02275 PF00487 Fatty acid desaturase LPY95_02280 PF12792 CSS motif domain associated with EAL LPY95_02280 PF00563 EAL domain LPY95_02295 PF13335 Magnesium chelatase, subunit ChlI C-terminal LPY95_02295 PF01078 Magnesium chelatase, subunit ChlI LPY95_02300 PF04380 Membrane fusogenic activity LPY95_02305 PF00543 Nitrogen regulatory protein P-II LPY95_02330 PF17284 Spermidine synthase tetramerisation domain LPY95_02335 PF17944 Arginine decarboxylase C-terminal helical extension LPY95_02335 PF17810 Arginine decarboxylase helical bundle domain LPY95_02335 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LPY95_02340 PF00668 Condensation domain LPY95_02340 PF00501 AMP-binding enzyme LPY95_02340 PF13193 AMP-binding enzyme C-terminal domain LPY95_02340 PF00550 Phosphopantetheine attachment site LPY95_02340 PF00668 Condensation domain LPY95_02340 PF00501 AMP-binding enzyme LPY95_02340 PF13193 AMP-binding enzyme C-terminal domain LPY95_02340 PF00975 Thioesterase domain LPY95_02340 PF00975 Thioesterase domain LPY95_02340 PF00550 Phosphopantetheine attachment site LPY95_02345 PF03033 Glycosyltransferase family 28 N-terminal domain LPY95_02355 PF00106 short chain dehydrogenase LPY95_02370 PF03485 Arginyl tRNA synthetase N terminal domain LPY95_02370 PF05746 DALR anticodon binding domain LPY95_02370 PF00750 tRNA synthetases class I (R) LPY95_02375 PF04002 RadC-like JAB domain LPY95_02380 PF04127 DNA / pantothenate metabolism flavoprotein LPY95_02380 PF02441 Flavoprotein LPY95_02385 PF00692 dUTPase LPY95_02390 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LPY95_02390 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LPY95_02390 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LPY95_02390 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LPY95_02405 PF00535 Glycosyl transferase family 2 LPY95_02410 PF01370 NAD dependent epimerase/dehydratase family LPY95_02420 PF17762 HTH domain found in ParB protein LPY95_02420 PF02195 ParB-like nuclease domain LPY95_02425 PF13614 AAA domain LPY95_02435 PF00156 Phosphoribosyl transferase domain LPY95_02440 PF03372 Endonuclease/Exonuclease/phosphatase family LPY95_02445 PF07690 Major Facilitator Superfamily LPY95_02455 PF03702 Anhydro-N-acetylmuramic acid kinase LPY95_02460 PF04225 Opacity-associated protein A LysM-like domain LPY95_02460 PF01551 Peptidase family M23 LPY95_02465 PF00579 tRNA synthetases class I (W and Y) LPY95_02495 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LPY95_02495 PF00171 Aldehyde dehydrogenase family LPY95_02495 PF01619 Proline dehydrogenase LPY95_02495 PF14850 DNA-binding domain of Proline dehydrogenase LPY95_02510 PF00115 Cytochrome C and Quinol oxidase polypeptide I LPY95_02520 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 LPY95_02525 PF00510 Cytochrome c oxidase subunit III LPY95_02550 PF01040 UbiA prenyltransferase family LPY95_02560 PF13593 SBF-like CPA transporter family (DUF4137) LPY95_02565 PF10410 DnaB-helicase binding domain of primase LPY95_02565 PF08278 DNA primase DnaG DnaB-binding LPY95_02565 PF08275 DNA primase catalytic core, N-terminal domain LPY95_02565 PF01807 CHC2 zinc finger LPY95_02570 PF03631 Virulence factor BrkB LPY95_02575 PF09424 Yqey-like protein LPY95_02580 PF01165 Ribosomal protein S21 LPY95_02590 PF02152 Dihydroneopterin aldolase LPY95_02595 PF14310 Fibronectin type III-like domain LPY95_02595 PF01915 Glycosyl hydrolase family 3 C-terminal domain LPY95_02595 PF00933 Glycosyl hydrolase family 3 N terminal domain LPY95_02600 PF07995 Glucose / Sorbosone dehydrogenase LPY95_02605 PF05360 yiaA/B two helix domain LPY95_02620 PF13520 Amino acid permease LPY95_02630 PF13378 Enolase C-terminal domain-like LPY95_02630 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LPY95_02640 PF01510 N-acetylmuramoyl-L-alanine amidase LPY95_02645 PF01427 D-ala-D-ala dipeptidase LPY95_02685 PF07063 Domain of unknown function (DUF1338) LPY95_02690 PF00873 AcrB/AcrD/AcrF family LPY95_02695 PF00873 AcrB/AcrD/AcrF family LPY95_02700 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPY95_02705 PF07687 Peptidase dimerisation domain LPY95_02705 PF01546 Peptidase family M20/M25/M40 LPY95_02710 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LPY95_02710 PF14489 QueF-like protein LPY95_02725 PF03971 Monomeric isocitrate dehydrogenase LPY95_02735 PF03466 LysR substrate binding domain LPY95_02735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPY95_02740 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) LPY95_02745 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LPY95_02745 PF07498 Rho termination factor, N-terminal domain LPY95_02745 PF07497 Rho termination factor, RNA-binding domain LPY95_02750 PF00085 Thioredoxin LPY95_02755 PF00270 DEAD/DEAH box helicase LPY95_02755 PF00271 Helicase conserved C-terminal domain LPY95_02755 PF12300 ATP-dependent RNA helicase RhlB LPY95_02760 PF00005 ABC transporter LPY95_02765 PF18075 FtsX extracellular domain LPY95_02770 PF01339 CheB methylesterase LPY95_02770 PF00072 Response regulator receiver domain LPY95_02775 PF03167 Uracil DNA glycosylase superfamily LPY95_02780 PF04545 Sigma-70, region 4 LPY95_02780 PF04542 Sigma-70 region 2 LPY95_02785 PF03458 UPF0126 domain LPY95_02790 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPY95_02805 PF00043 Glutathione S-transferase, C-terminal domain LPY95_02805 PF13417 Glutathione S-transferase, N-terminal domain LPY95_02810 PF18074 Primosomal protein N C-terminal domain LPY95_02810 PF00270 DEAD/DEAH box helicase LPY95_02810 PF00271 Helicase conserved C-terminal domain LPY95_02810 PF17764 3′ DNA-binding domain (3′BD) LPY95_02810 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LPY95_02830 PF01554 MatE LPY95_02835 PF01343 Peptidase family S49 LPY95_02860 PF01300 Telomere recombination LPY95_02865 PF01131 DNA topoisomerase LPY95_02865 PF01751 Toprim domain LPY95_02865 PF13368 Topoisomerase C-terminal repeat LPY95_02875 PF00114 Pilin (bacterial filament) LPY95_02875 PF07963 Prokaryotic N-terminal methylation motif LPY95_02880 PF04361 Protein of unknown function (DUF494) LPY95_02885 PF02481 DNA recombination-mediator protein A LPY95_02885 PF17782 DprA winged helix domain LPY95_02890 PF01476 LysM domain LPY95_02895 PF01327 Polypeptide deformylase LPY95_02900 PF02911 Formyl transferase, C-terminal domain LPY95_02900 PF00551 Formyl transferase LPY95_02905 PF01189 16S rRNA methyltransferase RsmB/F LPY95_02905 PF01029 NusB family LPY95_02920 PF00535 Glycosyl transferase family 2 LPY95_02940 PF00925 GTP cyclohydrolase II LPY95_02955 PF03279 Bacterial lipid A biosynthesis acyltransferase LPY95_02960 PF02580 D-Tyr-tRNA(Tyr) deacylase LPY95_02965 PF03979 Sigma-70 factor, region 1.1 LPY95_02965 PF04546 Sigma-70, non-essential region LPY95_02965 PF04545 Sigma-70, region 4 LPY95_02965 PF00140 Sigma-70 factor, region 1.2 LPY95_02965 PF04539 Sigma-70 region 3 LPY95_02965 PF04542 Sigma-70 region 2 LPY95_02980 PF13356 Arm DNA-binding domain LPY95_02980 PF00589 Phage integrase family LPY95_02985 PF12728 Helix-turn-helix domain LPY95_03015 PF00271 Helicase conserved C-terminal domain LPY95_03015 PF00176 SNF2 family N-terminal domain LPY95_03040 PF00557 Metallopeptidase family M24 LPY95_03080 PF02525 Flavodoxin-like fold LPY95_03085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPY95_03085 PF03466 LysR substrate binding domain LPY95_03100 PF03466 LysR substrate binding domain LPY95_03100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPY95_03110 PF00005 ABC transporter LPY95_03130 PF07715 TonB-dependent Receptor Plug Domain LPY95_03130 PF00593 TonB dependent receptor LPY95_03175 PF13823 Alcohol dehydrogenase GroES-associated LPY95_03175 PF08240 Alcohol dehydrogenase GroES-like domain LPY95_03175 PF00107 Zinc-binding dehydrogenase LPY95_03190 PF00664 ABC transporter transmembrane region LPY95_03190 PF00005 ABC transporter LPY95_03200 PF03275 UDP-galactopyranose mutase LPY95_03210 PF16363 GDP-mannose 4,6 dehydratase LPY95_03230 PF02322 Cytochrome bd terminal oxidase subunit II LPY95_03235 PF01654 Cytochrome bd terminal oxidase subunit I LPY95_03245 PF02954 Bacterial regulatory protein, Fis family LPY95_03245 PF00072 Response regulator receiver domain LPY95_03245 PF00158 Sigma-54 interaction domain LPY95_03280 PF05067 Manganese containing catalase LPY95_03285 PF05974 Domain of unknown function (DUF892) LPY95_03305 PF02743 Cache domain LPY95_03305 PF00672 HAMP domain LPY95_03305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_03305 PF06580 Histidine kinase LPY95_03310 PF04397 LytTr DNA-binding domain LPY95_03310 PF00072 Response regulator receiver domain LPY95_03320 PF13520 Amino acid permease LPY95_03340 PF05649 Peptidase family M13 LPY95_03340 PF01431 Peptidase family M13 LPY95_03350 PF00248 Aldo/keto reductase family LPY95_03355 PF03358 NADPH-dependent FMN reductase LPY95_03360 PF03466 LysR substrate binding domain LPY95_03360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPY95_03370 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LPY95_03380 PF03167 Uracil DNA glycosylase superfamily LPY95_03385 PF02469 Fasciclin domain LPY95_03390 PF00999 Sodium/hydrogen exchanger family LPY95_03395 PF00005 ABC transporter LPY95_03400 PF01061 ABC-2 type transporter LPY95_03425 PF13677 Membrane MotB of proton-channel complex MotA/MotB LPY95_03425 PF00691 OmpA family LPY95_03430 PF01618 MotA/TolQ/ExbB proton channel family LPY95_03440 PF01641 SelR domain LPY95_03450 PF01037 Lrp/AsnC ligand binding domain LPY95_03455 PF01266 FAD dependent oxidoreductase LPY95_03460 PF00842 Alanine racemase, C-terminal domain LPY95_03460 PF01168 Alanine racemase, N-terminal domain LPY95_03480 PF00512 His Kinase A (phospho-acceptor) domain LPY95_03480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_03480 PF00989 PAS fold LPY95_03490 PF07995 Glucose / Sorbosone dehydrogenase LPY95_03500 PF05175 Methyltransferase small domain LPY95_03500 PF08468 Methyltransferase small domain N-terminal LPY95_03505 PF01479 S4 domain LPY95_03505 PF00849 RNA pseudouridylate synthase LPY95_03510 PF13419 Haloacid dehalogenase-like hydrolase LPY95_03530 PF00989 PAS fold LPY95_03530 PF00072 Response regulator receiver domain LPY95_03530 PF01627 Hpt domain LPY95_03530 PF00512 His Kinase A (phospho-acceptor) domain LPY95_03530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_03530 PF18415 Histidine kinase receptor ArcB trans-membrane domain LPY95_03540 PF04461 Protein of unknown function (DUF520) LPY95_03545 PF00892 EamA-like transporter family LPY95_03550 PF09383 NIL domain LPY95_03550 PF00005 ABC transporter LPY95_03555 PF00528 Binding-protein-dependent transport system inner membrane component LPY95_03605 PF00364 Biotin-requiring enzyme LPY95_03605 PF02817 e3 binding domain LPY95_03605 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LPY95_03615 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPY95_03615 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LPY95_03635 PF00119 ATP synthase A chain LPY95_03640 PF00137 ATP synthase subunit C LPY95_03645 PF00430 ATP synthase B/B' CF(0) LPY95_03650 PF00213 ATP synthase delta (OSCP) subunit LPY95_03655 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LPY95_03655 PF00306 ATP synthase alpha/beta chain, C terminal domain LPY95_03655 PF02874 ATP synthase alpha/beta family, beta-barrel domain LPY95_03660 PF00231 ATP synthase LPY95_03665 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LPY95_03665 PF02874 ATP synthase alpha/beta family, beta-barrel domain LPY95_03670 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LPY95_03670 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LPY95_03685 PF12804 MobA-like NTP transferase domain LPY95_03685 PF14602 Hexapeptide repeat of succinyl-transferase LPY95_03685 PF00132 Bacterial transferase hexapeptide (six repeats) LPY95_03690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_03690 PF00512 His Kinase A (phospho-acceptor) domain LPY95_03695 PF02954 Bacterial regulatory protein, Fis family LPY95_03695 PF00072 Response regulator receiver domain LPY95_03695 PF00158 Sigma-54 interaction domain LPY95_03705 PF02687 FtsX-like permease family LPY95_03705 PF12704 MacB-like periplasmic core domain LPY95_03710 PF02687 FtsX-like permease family LPY95_03710 PF12704 MacB-like periplasmic core domain LPY95_03715 PF02687 FtsX-like permease family LPY95_03715 PF12704 MacB-like periplasmic core domain LPY95_03715 PF00005 ABC transporter LPY95_03720 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPY95_03755 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LPY95_03760 PF05275 Copper resistance protein B precursor (CopB) LPY95_03765 PF00394 Multicopper oxidase LPY95_03765 PF07732 Multicopper oxidase LPY95_03765 PF07731 Multicopper oxidase LPY95_03780 PF01432 Peptidase family M3 LPY95_03790 PF02801 Beta-ketoacyl synthase, C-terminal domain LPY95_03790 PF00109 Beta-ketoacyl synthase, N-terminal domain LPY95_03795 PF07977 FabA-like domain LPY95_03800 PF11799 impB/mucB/samB family C-terminal domain LPY95_03800 PF00817 impB/mucB/samB family LPY95_03805 PF13419 Haloacid dehalogenase-like hydrolase LPY95_03810 PF00593 TonB dependent receptor LPY95_03810 PF07715 TonB-dependent Receptor Plug Domain LPY95_03815 PF00756 Putative esterase LPY95_03825 PF13185 GAF domain LPY95_03840 PF01242 6-pyruvoyl tetrahydropterin synthase LPY95_03845 PF07715 TonB-dependent Receptor Plug Domain LPY95_03845 PF00593 TonB dependent receptor LPY95_03855 PF00270 DEAD/DEAH box helicase LPY95_03855 PF00271 Helicase conserved C-terminal domain LPY95_03865 PF14497 Glutathione S-transferase, C-terminal domain LPY95_03865 PF02798 Glutathione S-transferase, N-terminal domain LPY95_03870 PF00437 Type II/IV secretion system protein LPY95_03890 PF00571 CBS domain LPY95_03890 PF00291 Pyridoxal-phosphate dependent enzyme LPY95_03895 PF01053 Cys/Met metabolism PLP-dependent enzyme LPY95_03900 PF13439 Glycosyltransferase Family 4 LPY95_03900 PF00534 Glycosyl transferases group 1 LPY95_03910 PF00005 ABC transporter LPY95_03915 PF00069 Protein kinase domain LPY95_03915 PF13847 Methyltransferase domain LPY95_03920 PF13477 Glycosyl transferase 4-like LPY95_03920 PF00534 Glycosyl transferases group 1 LPY95_03925 PF16363 GDP-mannose 4,6 dehydratase LPY95_03930 PF16363 GDP-mannose 4,6 dehydratase LPY95_03940 PF05050 Methyltransferase FkbM domain LPY95_03950 PF01593 Flavin containing amine oxidoreductase LPY95_03960 PF00535 Glycosyl transferase family 2 LPY95_03975 PF00766 Electron transfer flavoprotein FAD-binding domain LPY95_03975 PF01012 Electron transfer flavoprotein domain LPY95_03980 PF01012 Electron transfer flavoprotein domain LPY95_03985 PF16363 GDP-mannose 4,6 dehydratase LPY95_03990 PF00483 Nucleotidyl transferase LPY95_03995 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LPY95_04000 PF04321 RmlD substrate binding domain LPY95_04005 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LPY95_04005 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LPY95_04005 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LPY95_04010 PF00483 Nucleotidyl transferase LPY95_04010 PF01050 Mannose-6-phosphate isomerase LPY95_04015 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LPY95_04015 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LPY95_04015 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LPY95_04015 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LPY95_04020 PF01144 Coenzyme A transferase LPY95_04025 PF01144 Coenzyme A transferase LPY95_04045 PF02470 MlaD protein LPY95_04045 PF03886 ABC-type transport auxiliary lipoprotein component LPY95_04050 PF00005 ABC transporter LPY95_04055 PF02405 Permease MlaE LPY95_04065 PF00816 H-NS histone family LPY95_04070 PF04073 Aminoacyl-tRNA editing domain LPY95_04070 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LPY95_04070 PF03129 Anticodon binding domain LPY95_04080 PF01066 CDP-alcohol phosphatidyltransferase LPY95_04095 PF00544 Pectate lyase LPY95_04100 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain LPY95_04100 PF01464 Transglycosylase SLT domain LPY95_04110 PF08264 Anticodon-binding domain of tRNA LPY95_04110 PF00133 tRNA synthetases class I (I, L, M and V) LPY95_04110 PF10458 Valyl tRNA synthetase tRNA binding arm LPY95_04125 PF00883 Cytosol aminopeptidase family, catalytic domain LPY95_04125 PF02789 Cytosol aminopeptidase family, N-terminal domain LPY95_04150 PF02899 Phage integrase, N-terminal SAM-like domain LPY95_04150 PF00589 Phage integrase family LPY95_04155 PF13098 Thioredoxin-like domain LPY95_04155 PF10411 Disulfide bond isomerase protein N-terminus LPY95_04160 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LPY95_04160 PF02769 AIR synthase related protein, C-terminal domain LPY95_04160 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LPY95_04165 PF05662 Coiled stalk of trimeric autotransporter adhesin LPY95_04165 PF03895 YadA-like membrane anchor domain LPY95_04165 PF13018 Extended Signal Peptide of Type V secretion system LPY95_04165 PF05658 Head domain of trimeric autotransporter adhesin LPY95_04170 PF04151 Bacterial pre-peptidase C-terminal domain LPY95_04170 PF00082 Subtilase family LPY95_04180 PF13018 Extended Signal Peptide of Type V secretion system LPY95_04180 PF03895 YadA-like membrane anchor domain LPY95_04180 PF05658 Head domain of trimeric autotransporter adhesin LPY95_04180 PF05662 Coiled stalk of trimeric autotransporter adhesin LPY95_04185 PF00082 Subtilase family LPY95_04185 PF04151 Bacterial pre-peptidase C-terminal domain LPY95_04190 PF00437 Type II/IV secretion system protein LPY95_04190 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LPY95_04195 PF00482 Type II secretion system (T2SS), protein F LPY95_04200 PF08334 Type II secretion system (T2SS), protein G LPY95_04205 PF12019 Type II transport protein GspH LPY95_04210 PF07963 Prokaryotic N-terminal methylation motif LPY95_04220 PF03934 Type II secretion system (T2SS), protein K LPY95_04225 PF05137 Fimbrial assembly protein (PilN) LPY95_04230 PF10741 Type II secretion system (T2SS), protein M subtype b LPY95_04240 PF00263 Bacterial type II and III secretion system protein LPY95_04240 PF03958 Bacterial type II/III secretion system short domain LPY95_04255 PF07702 UTRA domain LPY95_04255 PF00392 Bacterial regulatory proteins, gntR family LPY95_04265 PF07715 TonB-dependent Receptor Plug Domain LPY95_04265 PF00593 TonB dependent receptor LPY95_04300 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LPY95_04300 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LPY95_04315 PF07238 PilZ domain LPY95_04315 PF00535 Glycosyl transferase family 2 LPY95_04315 PF03552 Cellulose synthase LPY95_04320 PF03170 Bacterial cellulose synthase subunit LPY95_04325 PF01270 Glycosyl hydrolases family 8 LPY95_04330 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) LPY95_04345 PF03960 ArsC family LPY95_04350 PF01327 Polypeptide deformylase LPY95_04355 PF02645 Uncharacterised protein, DegV family COG1307 LPY95_04375 PF01979 Amidohydrolase family LPY95_04380 PF01979 Amidohydrolase family LPY95_04395 PF00462 Glutaredoxin LPY95_04400 PF01522 Polysaccharide deacetylase LPY95_04405 PF07715 TonB-dependent Receptor Plug Domain LPY95_04405 PF00593 TonB dependent receptor LPY95_04420 PF00155 Aminotransferase class I and II LPY95_04425 PF00664 ABC transporter transmembrane region LPY95_04425 PF03412 Peptidase C39 family LPY95_04425 PF00005 ABC transporter LPY95_04480 PF03193 RsgA GTPase LPY95_04495 PF00128 Alpha amylase, catalytic domain LPY95_04510 PF00356 Bacterial regulatory proteins, lacI family LPY95_04515 PF00106 short chain dehydrogenase LPY95_04520 PF03600 Citrate transporter LPY95_04530 PF00072 Response regulator receiver domain LPY95_04530 PF00486 Transcriptional regulatory protein, C terminal LPY95_04535 PF08521 Two-component sensor kinase N-terminal LPY95_04535 PF00512 His Kinase A (phospho-acceptor) domain LPY95_04535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_04545 PF00196 Bacterial regulatory proteins, luxR family LPY95_04545 PF00072 Response regulator receiver domain LPY95_04560 PF00248 Aldo/keto reductase family LPY95_04565 PF03466 LysR substrate binding domain LPY95_04565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPY95_04575 PF07690 Major Facilitator Superfamily LPY95_04580 PF00512 His Kinase A (phospho-acceptor) domain LPY95_04580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_04580 PF02743 Cache domain LPY95_04590 PF00375 Sodium:dicarboxylate symporter family LPY95_04595 PF03949 Malic enzyme, NAD binding domain LPY95_04595 PF01515 Phosphate acetyl/butaryl transferase LPY95_04595 PF00390 Malic enzyme, N-terminal domain LPY95_04620 PF03279 Bacterial lipid A biosynthesis acyltransferase LPY95_04625 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LPY95_04630 PF02321 Outer membrane efflux protein LPY95_04645 PF00990 Diguanylate cyclase, GGDEF domain LPY95_04650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPY95_04655 PF00330 Aconitase family (aconitate hydratase) LPY95_04660 PF00694 Aconitase C-terminal domain LPY95_04665 PF00180 Isocitrate/isopropylmalate dehydrogenase LPY95_04670 PF08502 LeuA allosteric (dimerisation) domain LPY95_04670 PF00682 HMGL-like LPY95_04675 PF00291 Pyridoxal-phosphate dependent enzyme LPY95_04685 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LPY95_04685 PF00205 Thiamine pyrophosphate enzyme, central domain LPY95_04685 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LPY95_04690 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LPY95_04690 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LPY95_04700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LPY95_04700 PF00672 HAMP domain LPY95_04705 PF00593 TonB dependent receptor LPY95_04705 PF07715 TonB-dependent Receptor Plug Domain LPY95_04710 PF13667 ThiC-associated domain LPY95_04710 PF01964 Radical SAM ThiC family LPY95_04720 PF12833 Helix-turn-helix domain LPY95_04725 PF00593 TonB dependent receptor LPY95_04725 PF07715 TonB-dependent Receptor Plug Domain LPY95_04735 PF00719 Inorganic pyrophosphatase LPY95_04745 PF03030 Inorganic H+ pyrophosphatase LPY95_04760 PF00365 Phosphofructokinase LPY95_04770 PF08245 Mur ligase middle domain LPY95_04770 PF02875 Mur ligase family, glutamate ligase domain LPY95_04770 PF01225 Mur ligase family, catalytic domain LPY95_04780 PF01062 Bestrophin, RFP-TM, chloride channel LPY95_04785 PF01569 PAP2 superfamily LPY95_04800 PF00027 Cyclic nucleotide-binding domain LPY95_04800 PF00520 Ion transport protein LPY95_04805 PF00202 Aminotransferase class-III LPY95_04820 PF01593 Flavin containing amine oxidoreductase LPY95_04825 PF00034 Cytochrome c LPY95_04825 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LPY95_04835 PF00155 Aminotransferase class I and II LPY95_04840 PF00127 Copper binding proteins, plastocyanin/azurin family LPY95_04845 PF00196 Bacterial regulatory proteins, luxR family LPY95_04845 PF17874 MalT-like TPR region LPY95_04850 PF00202 Aminotransferase class-III LPY95_04860 PF02581 Thiamine monophosphate synthase LPY95_04865 PF00301 Rubredoxin LPY95_04870 PF13369 Transglutaminase-like superfamily LPY95_04880 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LPY95_04890 PF01812 5-formyltetrahydrofolate cyclo-ligase family LPY95_04900 PF05164 Cell division protein ZapA LPY95_04910 PF03695 Uncharacterised protein family (UPF0149) LPY95_04915 PF00557 Metallopeptidase family M24 LPY95_04915 PF05195 Aminopeptidase P, N-terminal domain LPY95_04925 PF00557 Metallopeptidase family M24 LPY95_04940 PF04055 Radical SAM superfamily LPY95_04940 PF06969 HemN C-terminal domain LPY95_04945 PF01725 Ham1 family LPY95_04955 PF01138 3' exoribonuclease family, domain 1 LPY95_04955 PF03725 3' exoribonuclease family, domain 2 LPY95_04960 PF03755 YicC-like family, N-terminal region LPY95_04960 PF08340 Domain of unknown function (DUF1732) LPY95_04965 PF00625 Guanylate kinase LPY95_04970 PF01192 RNA polymerase Rpb6 LPY95_04975 PF02824 TGS domain LPY95_04975 PF04607 Region found in RelA / SpoT proteins LPY95_04975 PF13291 ACT domain LPY95_04980 PF01042 Endoribonuclease L-PSP LPY95_04985 PF00270 DEAD/DEAH box helicase LPY95_04985 PF00271 Helicase conserved C-terminal domain LPY95_04985 PF17191 RecG wedge domain LPY95_04990 PF01156 Inosine-uridine preferring nucleoside hydrolase LPY95_04995 PF01197 Ribosomal protein L31 LPY95_05000 PF00285 Citrate synthase, C-terminal domain LPY95_05010 PF00905 Penicillin binding protein transpeptidase domain LPY95_05010 PF17092 Penicillin-binding protein OB-like domain LPY95_05010 PF00912 Transglycosylase LPY95_05015 PF11104 Type IV pilus assembly protein PilM; LPY95_05020 PF05137 Fimbrial assembly protein (PilN) LPY95_05025 PF04350 Pilus assembly protein, PilO LPY95_05030 PF04351 Pilus assembly protein, PilP LPY95_05035 PF03958 Bacterial type II/III secretion system short domain LPY95_05035 PF00263 Bacterial type II and III secretion system protein LPY95_05035 PF11741 AMIN domain LPY95_05035 PF07660 Secretin and TonB N terminus short domain LPY95_05045 PF17863 AAA lid domain LPY95_05045 PF07726 ATPase family associated with various cellular activities (AAA) LPY95_05065 PF07584 Aerotolerance regulator N-terminal LPY95_05065 PF00092 von Willebrand factor type A domain LPY95_05075 PF00375 Sodium:dicarboxylate symporter family LPY95_05080 PF02779 Transketolase, pyrimidine binding domain LPY95_05080 PF02780 Transketolase, C-terminal domain LPY95_05080 PF00456 Transketolase, thiamine diphosphate binding domain LPY95_05090 PF12146 Serine aminopeptidase, S33 LPY95_05095 PF00593 TonB dependent receptor LPY95_05095 PF07715 TonB-dependent Receptor Plug Domain LPY95_05145 PF00005 ABC transporter LPY95_05145 PF03459 TOBE domain LPY95_05150 PF00528 Binding-protein-dependent transport system inner membrane component LPY95_05160 PF04273 Putative phosphatase (DUF442) LPY95_05160 PF00753 Metallo-beta-lactamase superfamily LPY95_05170 PF03922 OmpW family LPY95_05175 PF03922 OmpW family LPY95_05185 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LPY95_05185 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LPY95_05205 PF00162 Phosphoglycerate kinase LPY95_05215 PF02887 Pyruvate kinase, alpha/beta domain LPY95_05215 PF00224 Pyruvate kinase, barrel domain LPY95_05220 PF00274 Fructose-bisphosphate aldolase class-I LPY95_05225 PF01661 Macro domain LPY95_05235 PF00291 Pyridoxal-phosphate dependent enzyme LPY95_05240 PF14824 Sirohaem biosynthesis protein central LPY95_05240 PF10414 Sirohaem synthase dimerisation region LPY95_05240 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LPY95_05245 PF03466 LysR substrate binding domain LPY95_05245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPY95_05255 PF00072 Response regulator receiver domain LPY95_05255 PF01627 Hpt domain LPY95_05255 PF00512 His Kinase A (phospho-acceptor) domain LPY95_05255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_05275 PF01507 Phosphoadenosine phosphosulfate reductase family LPY95_05280 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LPY95_05280 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LPY95_05285 PF00667 FAD binding domain LPY95_05285 PF00258 Flavodoxin LPY95_05285 PF00175 Oxidoreductase NAD-binding domain LPY95_05290 PF01507 Phosphoadenosine phosphosulfate reductase family LPY95_05295 PF00009 Elongation factor Tu GTP binding domain LPY95_05300 PF00529 HlyD membrane-fusion protein of T1SS LPY95_05300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPY95_05305 PF00873 AcrB/AcrD/AcrF family LPY95_05330 PF11838 ERAP1-like C-terminal domain LPY95_05330 PF01433 Peptidase family M1 domain LPY95_05340 PF00588 SpoU rRNA Methylase family LPY95_05340 PF08032 RNA 2'-O ribose methyltransferase substrate binding LPY95_05345 PF00135 Carboxylesterase family LPY95_05355 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation LPY95_05355 PF14508 Glycosyl-hydrolase 97 N-terminal LPY95_05355 PF10566 Glycoside hydrolase 97 LPY95_05360 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain LPY95_05360 PF02837 Glycosyl hydrolases family 2, sugar binding domain LPY95_05360 PF00703 Glycosyl hydrolases family 2 LPY95_05370 PF00356 Bacterial regulatory proteins, lacI family LPY95_05380 PF01741 Large-conductance mechanosensitive channel, MscL LPY95_05385 PF01557 Fumarylacetoacetate (FAA) hydrolase family LPY95_05400 PF03600 Citrate transporter LPY95_05400 PF02080 TrkA-C domain LPY95_05405 PF02390 Putative methyltransferase LPY95_05410 PF05690 Thiazole biosynthesis protein ThiG LPY95_05420 PF00657 GDSL-like Lipase/Acylhydrolase LPY95_05420 PF03797 Autotransporter beta-domain LPY95_05445 PF01695 IstB-like ATP binding protein LPY95_05450 PF02796 Helix-turn-helix domain of resolvase LPY95_05450 PF00665 Integrase core domain LPY95_05470 PF17841 BID domain of Bartonella effector protein (Bep) LPY95_05470 PF03389 MobA/MobL family LPY95_05470 PF01443 Viral (Superfamily 1) RNA helicase LPY95_05510 PF00128 Alpha amylase, catalytic domain LPY95_05510 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LPY95_05515 PF08443 RimK-like ATP-grasp domain LPY95_05515 PF18030 RimK PreATP-grasp domain LPY95_05525 PF00072 Response regulator receiver domain LPY95_05525 PF00486 Transcriptional regulatory protein, C terminal LPY95_05530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_05530 PF00512 His Kinase A (phospho-acceptor) domain LPY95_05530 PF16736 Single Cache-like LPY95_05530 PF00989 PAS fold LPY95_05560 PF01121 Dephospho-CoA kinase LPY95_05565 PF01478 Type IV leader peptidase family LPY95_05565 PF06750 Bacterial Peptidase A24 N-terminal domain LPY95_05570 PF00482 Type II secretion system (T2SS), protein F LPY95_05590 PF00437 Type II/IV secretion system protein LPY95_05590 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LPY95_05595 PF00437 Type II/IV secretion system protein LPY95_05595 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LPY95_05600 PF00072 Response regulator receiver domain LPY95_05600 PF00158 Sigma-54 interaction domain LPY95_05600 PF02954 Bacterial regulatory protein, Fis family LPY95_05605 PF00512 His Kinase A (phospho-acceptor) domain LPY95_05605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_05610 PF08442 ATP-grasp domain LPY95_05610 PF00549 CoA-ligase LPY95_05615 PF00549 CoA-ligase LPY95_05615 PF02629 CoA binding domain LPY95_05630 PF00795 Carbon-nitrogen hydrolase LPY95_05630 PF02540 NAD synthase LPY95_05640 PF13525 Outer membrane lipoprotein LPY95_05645 PF00849 RNA pseudouridylate synthase LPY95_05650 PF02578 Multi-copper polyphenol oxidoreductase laccase LPY95_05665 PF02203 Tar ligand binding domain homologue LPY95_05665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LPY95_05665 PF00672 HAMP domain LPY95_05670 PF01011 PQQ enzyme repeat LPY95_05675 PF00982 Glycosyltransferase family 20 LPY95_05680 PF00723 Glycosyl hydrolases family 15 LPY95_05685 PF02358 Trehalose-phosphatase LPY95_05690 PF07715 TonB-dependent Receptor Plug Domain LPY95_05690 PF00593 TonB dependent receptor LPY95_05725 PF01541 GIY-YIG catalytic domain LPY95_05730 PF00593 TonB dependent receptor LPY95_05730 PF07715 TonB-dependent Receptor Plug Domain LPY95_05740 PF00248 Aldo/keto reductase family LPY95_05745 PF09084 NMT1/THI5 like LPY95_05750 PF00528 Binding-protein-dependent transport system inner membrane component LPY95_05755 PF00005 ABC transporter LPY95_05760 PF07724 AAA domain (Cdc48 subfamily) LPY95_05760 PF00004 ATPase family associated with various cellular activities (AAA) LPY95_05760 PF17871 AAA lid domain LPY95_05760 PF10431 C-terminal, D2-small domain, of ClpB protein LPY95_05760 PF02861 Clp amino terminal domain, pathogenicity island component LPY95_05765 PF07715 TonB-dependent Receptor Plug Domain LPY95_05765 PF00593 TonB dependent receptor LPY95_05780 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP LPY95_05780 PF12557 Cob(I)alamin adenosyltransferase N terminal LPY95_05785 PF03186 CobD/Cbib protein LPY95_05785 PF17113 Regulatory signalling modulator protein AmpE LPY95_05790 PF00155 Aminotransferase class I and II LPY95_05795 PF07685 CobB/CobQ-like glutamine amidotransferase domain LPY95_05795 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LPY95_05800 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase LPY95_05805 PF02277 Phosphoribosyltransferase LPY95_05815 PF02654 Cobalamin-5-phosphate synthase LPY95_05830 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LPY95_05830 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LPY95_05835 PF04183 IucA / IucC family LPY95_05835 PF06276 Ferric iron reductase FhuF-like transporter LPY95_05840 PF07690 Major Facilitator Superfamily LPY95_05845 PF04183 IucA / IucC family LPY95_05845 PF06276 Ferric iron reductase FhuF-like transporter LPY95_05855 PF07660 Secretin and TonB N terminus short domain LPY95_05855 PF07715 TonB-dependent Receptor Plug Domain LPY95_05855 PF00593 TonB dependent receptor LPY95_05880 PF02254 TrkA-N domain LPY95_05880 PF00999 Sodium/hydrogen exchanger family LPY95_05890 PF00593 TonB dependent receptor LPY95_05890 PF07715 TonB-dependent Receptor Plug Domain LPY95_05905 PF07715 TonB-dependent Receptor Plug Domain LPY95_05905 PF00593 TonB dependent receptor LPY95_05910 PF00005 ABC transporter LPY95_05910 PF12848 ABC transporter LPY95_05920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPY95_05920 PF03466 LysR substrate binding domain LPY95_05950 PF07690 Major Facilitator Superfamily LPY95_05965 PF01336 OB-fold nucleic acid binding domain LPY95_05965 PF02938 GAD domain LPY95_05965 PF00152 tRNA synthetases class II (D, K and N) LPY95_05980 PF01709 Transcriptional regulator LPY95_05985 PF02075 Crossover junction endodeoxyribonuclease RuvC LPY95_05990 PF01330 RuvA N terminal domain LPY95_05990 PF07499 RuvA, C-terminal domain LPY95_05995 PF02705 K+ potassium transporter LPY95_06005 PF17864 RuvB AAA lid domain LPY95_06005 PF05491 RuvB C-terminal winged helix domain LPY95_06005 PF05496 Holliday junction DNA helicase RuvB P-loop domain LPY95_06010 PF03061 Thioesterase superfamily LPY95_06015 PF01618 MotA/TolQ/ExbB proton channel family LPY95_06020 PF02472 Biopolymer transport protein ExbD/TolR LPY95_06030 PF04052 TolB amino-terminal domain LPY95_06030 PF07676 WD40-like Beta Propeller Repeat LPY95_06035 PF00691 OmpA family LPY95_06045 PF04055 Radical SAM superfamily LPY95_06055 PF06508 Queuosine biosynthesis protein QueC LPY95_06060 PF13426 PAS domain LPY95_06060 PF07536 HWE histidine kinase LPY95_06060 PF13581 Histidine kinase-like ATPase domain LPY95_06070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPY95_06070 PF03466 LysR substrate binding domain LPY95_06075 PF01810 LysE type translocator LPY95_06080 PF00672 HAMP domain LPY95_06080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LPY95_06080 PF02203 Tar ligand binding domain homologue LPY95_06110 PF09382 RQC domain LPY95_06110 PF16124 RecQ zinc-binding LPY95_06110 PF00570 HRDC domain LPY95_06110 PF00270 DEAD/DEAH box helicase LPY95_06110 PF00271 Helicase conserved C-terminal domain LPY95_06115 PF00210 Ferritin-like domain LPY95_06120 PF00270 DEAD/DEAH box helicase LPY95_06120 PF11898 Domain of unknown function (DUF3418) LPY95_06120 PF04408 Helicase associated domain (HA2) LPY95_06120 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LPY95_06120 PF00271 Helicase conserved C-terminal domain LPY95_06135 PF02685 Glucokinase LPY95_06150 PF13186 Iron-sulfur cluster-binding domain LPY95_06150 PF04055 Radical SAM superfamily LPY95_06155 PF05402 Coenzyme PQQ synthesis protein D (PqqD) LPY95_06160 PF03070 TENA/THI-4/PQQC family LPY95_06165 PF12706 Beta-lactamase superfamily domain LPY95_06170 PF08042 PqqA family LPY95_06175 PF13291 ACT domain LPY95_06175 PF04607 Region found in RelA / SpoT proteins LPY95_06175 PF02824 TGS domain LPY95_06185 PF00535 Glycosyl transferase family 2 LPY95_06190 PF14814 Bifunctional transglycosylase second domain LPY95_06190 PF00905 Penicillin binding protein transpeptidase domain LPY95_06190 PF00912 Transglycosylase LPY95_06200 PF04851 Type III restriction enzyme, res subunit LPY95_06200 PF13307 Helicase C-terminal domain LPY95_06205 PF00814 Glycoprotease family LPY95_06210 PF03747 ADP-ribosylglycohydrolase LPY95_06220 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LPY95_06220 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LPY95_06225 PF00072 Response regulator receiver domain LPY95_06230 PF00072 Response regulator receiver domain LPY95_06235 PF01584 CheW-like domain LPY95_06240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LPY95_06240 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LPY95_06245 PF00072 Response regulator receiver domain LPY95_06245 PF01584 CheW-like domain LPY95_06245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_06245 PF01627 Hpt domain LPY95_06260 PF13302 Acetyltransferase (GNAT) domain LPY95_06265 PF01112 Asparaginase LPY95_06270 PF03932 CutC family LPY95_06300 PF01301 Glycosyl hydrolases family 35 LPY95_06305 PF07971 Glycosyl hydrolase family 92 LPY95_06305 PF17678 Glycosyl hydrolase family 92 N-terminal domain LPY95_06345 PF00664 ABC transporter transmembrane region LPY95_06345 PF00005 ABC transporter LPY95_06345 PF03412 Peptidase C39 family LPY95_06350 PF14310 Fibronectin type III-like domain LPY95_06350 PF00933 Glycosyl hydrolase family 3 N terminal domain LPY95_06350 PF01915 Glycosyl hydrolase family 3 C-terminal domain LPY95_06350 PF07691 PA14 domain LPY95_06360 PF07691 PA14 domain LPY95_06360 PF00728 Glycosyl hydrolase family 20, catalytic domain LPY95_06360 PF02838 Glycosyl hydrolase family 20, domain 2 LPY95_06365 PF00704 Glycosyl hydrolases family 18 LPY95_06365 PF01476 LysM domain LPY95_06380 PF02685 Glucokinase LPY95_06385 PF04452 RNA methyltransferase LPY95_06390 PF00202 Aminotransferase class-III LPY95_06395 PF00293 NUDIX domain LPY95_06400 PF00459 Inositol monophosphatase family LPY95_06405 PF03819 MazG nucleotide pyrophosphohydrolase domain LPY95_06410 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LPY95_06430 PF01571 Aminomethyltransferase folate-binding domain LPY95_06430 PF08669 Glycine cleavage T-protein C-terminal barrel domain LPY95_06435 PF01597 Glycine cleavage H-protein LPY95_06465 PF09317 Domain of unknown function (DUF1974) LPY95_06465 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LPY95_06465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LPY95_06470 PF00561 alpha/beta hydrolase fold LPY95_06475 PF00440 Bacterial regulatory proteins, tetR family LPY95_06505 PF07715 TonB-dependent Receptor Plug Domain LPY95_06505 PF00593 TonB dependent receptor LPY95_06515 PF01430 Hsp33 protein LPY95_06520 PF00912 Transglycosylase LPY95_06525 PF00535 Glycosyl transferase family 2 LPY95_06530 PF00571 CBS domain LPY95_06530 PF00478 IMP dehydrogenase / GMP reductase domain LPY95_06535 PF05170 AsmA family LPY95_06540 PF03006 Haemolysin-III related LPY95_06545 PF00009 Elongation factor Tu GTP binding domain LPY95_06545 PF16658 Class II release factor RF3, C-terminal domain LPY95_06550 PF01551 Peptidase family M23 LPY95_06550 PF01476 LysM domain LPY95_06550 PF08525 Opacity-associated protein A N-terminal motif LPY95_06555 PF00561 alpha/beta hydrolase fold LPY95_06560 PF01053 Cys/Met metabolism PLP-dependent enzyme LPY95_06565 PF00696 Amino acid kinase family LPY95_06565 PF00742 Homoserine dehydrogenase LPY95_06565 PF03447 Homoserine dehydrogenase, NAD binding domain LPY95_06575 PF03313 Serine dehydratase alpha chain LPY95_06575 PF03315 Serine dehydratase beta chain LPY95_06595 PF04264 YceI-like domain LPY95_06600 PF00512 His Kinase A (phospho-acceptor) domain LPY95_06600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_06600 PF00072 Response regulator receiver domain LPY95_06600 PF01627 Hpt domain LPY95_06605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_06605 PF00072 Response regulator receiver domain LPY95_06605 PF00989 PAS fold LPY95_06605 PF01627 Hpt domain LPY95_06605 PF18415 Histidine kinase receptor ArcB trans-membrane domain LPY95_06605 PF00512 His Kinase A (phospho-acceptor) domain LPY95_06610 PF01627 Hpt domain LPY95_06610 PF00072 Response regulator receiver domain LPY95_06610 PF17149 Periplasmic sensor domain found in signal transduction proteins LPY95_06610 PF00512 His Kinase A (phospho-acceptor) domain LPY95_06610 PF00672 HAMP domain LPY95_06610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_06615 PF01627 Hpt domain LPY95_06615 PF00512 His Kinase A (phospho-acceptor) domain LPY95_06615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_06615 PF00672 HAMP domain LPY95_06615 PF17149 Periplasmic sensor domain found in signal transduction proteins LPY95_06615 PF00072 Response regulator receiver domain LPY95_06625 PF01208 Uroporphyrinogen decarboxylase (URO-D) LPY95_06635 PF01761 3-dehydroquinate synthase LPY95_06640 PF01202 Shikimate kinase LPY95_06645 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LPY95_06645 PF01243 Pyridoxamine 5'-phosphate oxidase LPY95_06655 PF04012 PspA/IM30 family LPY95_06680 PF03738 Glutathionylspermidine synthase preATP-grasp LPY95_06705 PF00376 MerR family regulatory protein LPY95_06705 PF09278 MerR, DNA binding LPY95_06740 PF04820 Tryptophan halogenase LPY95_06745 PF12706 Beta-lactamase superfamily domain LPY95_06765 PF00324 Amino acid permease LPY95_06775 PF00196 Bacterial regulatory proteins, luxR family LPY95_06785 PF00561 alpha/beta hydrolase fold LPY95_06805 PF00324 Amino acid permease LPY95_06815 PF01654 Cytochrome bd terminal oxidase subunit I LPY95_06820 PF02322 Cytochrome bd terminal oxidase subunit II LPY95_06830 PF00756 Putative esterase LPY95_06835 PF00571 CBS domain LPY95_06835 PF01769 Divalent cation transporter LPY95_06835 PF03448 MgtE intracellular N domain LPY95_06840 PF05524 PEP-utilising enzyme, N-terminal LPY95_06840 PF00391 PEP-utilising enzyme, mobile domain LPY95_06840 PF02896 PEP-utilising enzyme, TIM barrel domain LPY95_06845 PF00381 PTS HPr component phosphorylation site LPY95_06855 PF03668 P-loop ATPase protein family LPY95_06860 PF07475 HPr Serine kinase C-terminal domain LPY95_06860 PF02603 HPr Serine kinase N terminus LPY95_06865 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LPY95_06870 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LPY95_06875 PF00309 Sigma-54 factor, Activator interacting domain (AID) LPY95_06875 PF04963 Sigma-54 factor, core binding domain LPY95_06875 PF04552 Sigma-54, DNA binding domain LPY95_06880 PF00005 ABC transporter LPY95_06885 PF03968 OstA-like protein LPY95_06900 PF00571 CBS domain LPY95_06900 PF01380 SIS domain LPY95_06905 PF01722 BolA-like protein LPY95_06910 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LPY95_06930 PF00551 Formyl transferase LPY95_06945 PF02769 AIR synthase related protein, C-terminal domain LPY95_06945 PF00586 AIR synthase related protein, N-terminal domain LPY95_06955 PF01594 AI-2E family transporter LPY95_06960 PF00308 Bacterial dnaA protein LPY95_06965 PF00483 Nucleotidyl transferase LPY95_06970 PF01636 Phosphotransferase enzyme family LPY95_07000 PF00667 FAD binding domain LPY95_07000 PF00258 Flavodoxin LPY95_07000 PF00175 Oxidoreductase NAD-binding domain LPY95_07005 PF02424 ApbE family LPY95_07030 PF13640 2OG-Fe(II) oxygenase superfamily LPY95_07030 PF18331 PKHD-type hydroxylase C-terminal domain LPY95_07035 PF07715 TonB-dependent Receptor Plug Domain LPY95_07035 PF00593 TonB dependent receptor LPY95_07040 PF00355 Rieske [2Fe-2S] domain LPY95_07050 PF00266 Aminotransferase class-V LPY95_07055 PF01458 Uncharacterized protein family (UPF0051) LPY95_07060 PF00005 ABC transporter LPY95_07065 PF01458 Uncharacterized protein family (UPF0051) LPY95_07070 PF02082 Transcriptional regulator LPY95_07080 PF01965 DJ-1/PfpI family LPY95_07100 PF01551 Peptidase family M23 LPY95_07115 PF03807 NADP oxidoreductase coenzyme F420-dependent LPY95_07115 PF14748 Pyrroline-5-carboxylate reductase dimerisation LPY95_07120 PF01168 Alanine racemase, N-terminal domain LPY95_07125 PF00437 Type II/IV secretion system protein LPY95_07130 PF00437 Type II/IV secretion system protein LPY95_07145 PF13673 Acetyltransferase (GNAT) domain LPY95_07145 PF13302 Acetyltransferase (GNAT) domain LPY95_07145 PF03352 Methyladenine glycosylase LPY95_07145 PF00958 GMP synthase C terminal domain LPY95_07145 PF00117 Glutamine amidotransferase class-I LPY95_07150 PF02622 Uncharacterized ACR, COG1678 LPY95_07155 PF03652 Holliday junction resolvase LPY95_07160 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LPY95_07160 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LPY95_07165 PF02566 OsmC-like protein LPY95_07175 PF02567 Phenazine biosynthesis-like protein LPY95_07180 PF02567 Phenazine biosynthesis-like protein LPY95_07185 PF00696 Amino acid kinase family LPY95_07185 PF01842 ACT domain LPY95_07200 PF02875 Mur ligase family, glutamate ligase domain LPY95_07200 PF08245 Mur ligase middle domain LPY95_07215 PF00348 Polyprenyl synthetase LPY95_07220 PF00436 Single-strand binding protein family LPY95_07225 PF00990 Diguanylate cyclase, GGDEF domain LPY95_07225 PF00360 Phytochrome region LPY95_07225 PF01590 GAF domain LPY95_07225 PF00563 EAL domain LPY95_07230 PF00550 Phosphopantetheine attachment site LPY95_07230 PF08659 KR domain LPY95_07230 PF02801 Beta-ketoacyl synthase, C-terminal domain LPY95_07230 PF00698 Acyl transferase domain LPY95_07230 PF16197 Ketoacyl-synthetase C-terminal extension LPY95_07230 PF00107 Zinc-binding dehydrogenase LPY95_07230 PF08240 Alcohol dehydrogenase GroES-like domain LPY95_07230 PF00109 Beta-ketoacyl synthase, N-terminal domain LPY95_07230 PF14765 Polyketide synthase dehydratase LPY95_07235 PF00111 2Fe-2S iron-sulfur cluster binding domain LPY95_07235 PF01799 [2Fe-2S] binding domain LPY95_07235 PF10518 TAT (twin-arginine translocation) pathway signal sequence LPY95_07240 PF03450 CO dehydrogenase flavoprotein C-terminal domain LPY95_07240 PF00941 FAD binding domain in molybdopterin dehydrogenase LPY95_07245 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LPY95_07245 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LPY95_07250 PF13478 XdhC Rossmann domain LPY95_07250 PF02625 XdhC and CoxI family LPY95_07285 PF04328 Selenoprotein, putative LPY95_07290 PF02554 Carbon starvation protein CstA LPY95_07290 PF13722 5TM C-terminal transporter carbon starvation CstA LPY95_07295 PF02678 Pirin LPY95_07295 PF05726 Pirin C-terminal cupin domain LPY95_07310 PF05726 Pirin C-terminal cupin domain LPY95_07310 PF02678 Pirin LPY95_07320 PF04493 Endonuclease V LPY95_07325 PF00300 Histidine phosphatase superfamily (branch 1) LPY95_07335 PF01431 Peptidase family M13 LPY95_07335 PF05649 Peptidase family M13 LPY95_07340 PF13091 PLD-like domain LPY95_07345 PF01339 CheB methylesterase LPY95_07345 PF00072 Response regulator receiver domain LPY95_07350 PF01739 CheR methyltransferase, SAM binding domain LPY95_07350 PF03705 CheR methyltransferase, all-alpha domain LPY95_07355 PF00990 Diguanylate cyclase, GGDEF domain LPY95_07355 PF13426 PAS domain LPY95_07355 PF00563 EAL domain LPY95_07360 PF01584 CheW-like domain LPY95_07370 PF02895 Signal transducing histidine kinase, homodimeric domain LPY95_07370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_07370 PF01627 Hpt domain LPY95_07370 PF01584 CheW-like domain LPY95_07370 PF09078 CheY binding LPY95_07400 PF02559 CarD-like/TRCF domain LPY95_07400 PF00270 DEAD/DEAH box helicase LPY95_07400 PF00271 Helicase conserved C-terminal domain LPY95_07400 PF03461 TRCF domain LPY95_07400 PF17757 UvrB interaction domain LPY95_07410 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LPY95_07415 PF00072 Response regulator receiver domain LPY95_07415 PF00486 Transcriptional regulatory protein, C terminal LPY95_07420 PF00672 HAMP domain LPY95_07420 PF00512 His Kinase A (phospho-acceptor) domain LPY95_07420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_07435 PF06123 Inner membrane protein CreD LPY95_07460 PF00749 tRNA synthetases class I (E and Q), catalytic domain LPY95_07465 PF01475 Ferric uptake regulator family LPY95_07475 PF00529 HlyD membrane-fusion protein of T1SS LPY95_07475 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPY95_07480 PF00873 AcrB/AcrD/AcrF family LPY95_07485 PF02321 Outer membrane efflux protein LPY95_07495 PF00248 Aldo/keto reductase family LPY95_07500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPY95_07500 PF03466 LysR substrate binding domain LPY95_07510 PF12833 Helix-turn-helix domain LPY95_07510 PF06719 AraC-type transcriptional regulator N-terminus LPY95_07520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPY95_07520 PF03466 LysR substrate binding domain LPY95_07525 PF07690 Major Facilitator Superfamily LPY95_07540 PF01483 Proprotein convertase P-domain LPY95_07540 PF00082 Subtilase family LPY95_07560 PF00593 TonB dependent receptor LPY95_07560 PF07715 TonB-dependent Receptor Plug Domain LPY95_07580 PF08240 Alcohol dehydrogenase GroES-like domain LPY95_07580 PF00107 Zinc-binding dehydrogenase LPY95_07585 PF00654 Voltage gated chloride channel LPY95_07595 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LPY95_07595 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LPY95_07645 PF03880 DbpA RNA binding domain LPY95_07645 PF00270 DEAD/DEAH box helicase LPY95_07645 PF00271 Helicase conserved C-terminal domain LPY95_07650 PF00563 EAL domain LPY95_07650 PF00990 Diguanylate cyclase, GGDEF domain LPY95_07650 PF08448 PAS fold LPY95_07655 PF00849 RNA pseudouridylate synthase LPY95_07655 PF01479 S4 domain LPY95_07660 PF00990 Diguanylate cyclase, GGDEF domain LPY95_07675 PF03737 Aldolase/RraA LPY95_07680 PF00144 Beta-lactamase LPY95_07685 PF00999 Sodium/hydrogen exchanger family LPY95_07695 PF00486 Transcriptional regulatory protein, C terminal LPY95_07695 PF00072 Response regulator receiver domain LPY95_07700 PF02321 Outer membrane efflux protein LPY95_07715 PF00873 AcrB/AcrD/AcrF family LPY95_07730 PF00664 ABC transporter transmembrane region LPY95_07730 PF00005 ABC transporter LPY95_07760 PF03466 LysR substrate binding domain LPY95_07760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPY95_07770 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LPY95_07775 PF04070 Domain of unknown function (DUF378) LPY95_07810 PF00085 Thioredoxin LPY95_07820 PF13603 Leucyl-tRNA synthetase, Domain 2 LPY95_07820 PF00133 tRNA synthetases class I (I, L, M and V) LPY95_07820 PF08264 Anticodon-binding domain of tRNA LPY95_07835 PF01467 Cytidylyltransferase-like LPY95_07850 PF02590 Predicted SPOUT methyltransferase LPY95_07865 PF04402 Protein of unknown function (DUF541) LPY95_07870 PF02545 Maf-like protein LPY95_07875 PF10150 Ribonuclease E/G family LPY95_07875 PF00575 S1 RNA binding domain LPY95_07880 PF13116 Protein of unknown function LPY95_07880 PF13502 AsmA-like C-terminal region LPY95_07890 PF01523 Putative modulator of DNA gyrase LPY95_07895 PF04751 Protein of unknown function (DUF615) LPY95_07900 PF01523 Putative modulator of DNA gyrase LPY95_07910 PF14521 Lysine-specific metallo-endopeptidase LPY95_07915 PF00348 Polyprenyl synthetase LPY95_07920 PF02609 Exonuclease VII small subunit LPY95_07925 PF11734 TilS substrate C-terminal domain LPY95_07925 PF01171 PP-loop family LPY95_07925 PF09179 TilS substrate binding domain LPY95_07930 PF00245 Alkaline phosphatase LPY95_07935 PF00375 Sodium:dicarboxylate symporter family LPY95_07950 PF00877 NlpC/P60 family LPY95_07955 PF00877 NlpC/P60 family LPY95_07960 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPY95_07965 PF04235 Protein of unknown function (DUF418) LPY95_07970 PF01266 FAD dependent oxidoreductase LPY95_07975 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LPY95_07975 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPY95_07980 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LPY95_07995 PF01431 Peptidase family M13 LPY95_07995 PF05649 Peptidase family M13 LPY95_08000 PF01431 Peptidase family M13 LPY95_08000 PF05649 Peptidase family M13 LPY95_08015 PF07715 TonB-dependent Receptor Plug Domain LPY95_08015 PF00593 TonB dependent receptor LPY95_08020 PF10609 NUBPL iron-transfer P-loop NTPase LPY95_08025 PF00692 dUTPase LPY95_08065 PF00082 Subtilase family LPY95_08070 PF01434 Peptidase family M41 LPY95_08070 PF06480 FtsH Extracellular LPY95_08070 PF17862 AAA+ lid domain LPY95_08070 PF00004 ATPase family associated with various cellular activities (AAA) LPY95_08080 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LPY95_08095 PF18693 TRAM domain LPY95_08095 PF00919 Uncharacterized protein family UPF0004 LPY95_08095 PF04055 Radical SAM superfamily LPY95_08100 PF01272 Transcription elongation factor, GreA/GreB, C-term LPY95_08100 PF03449 Transcription elongation factor, N-terminal LPY95_08115 PF00293 NUDIX domain LPY95_08120 PF05872 Bacterial protein of unknown function (DUF853) LPY95_08135 PF02666 Phosphatidylserine decarboxylase LPY95_08140 PF02630 SCO1/SenC LPY95_08145 PF05175 Methyltransferase small domain LPY95_08150 PF01264 Chorismate synthase LPY95_08155 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LPY95_08155 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LPY95_08160 PF01118 Semialdehyde dehydrogenase, NAD binding domain LPY95_08160 PF02774 Semialdehyde dehydrogenase, dimerisation domain LPY95_08180 PF01416 tRNA pseudouridine synthase LPY95_08185 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LPY95_08190 PF03466 LysR substrate binding domain LPY95_08190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPY95_08195 PF00291 Pyridoxal-phosphate dependent enzyme LPY95_08205 PF00290 Tryptophan synthase alpha chain LPY95_08210 PF01039 Carboxyl transferase domain LPY95_08210 PF17848 Acetyl-coA carboxylase zinc finger domain LPY95_08215 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LPY95_08215 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LPY95_08215 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LPY95_08215 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LPY95_08230 PF00563 EAL domain LPY95_08230 PF00990 Diguanylate cyclase, GGDEF domain LPY95_08230 PF03707 Bacterial signalling protein N terminal repeat LPY95_08245 PF00106 short chain dehydrogenase LPY95_08250 PF00121 Triosephosphate isomerase LPY95_08265 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LPY95_08270 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LPY95_08275 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LPY95_08280 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LPY95_08290 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LPY95_08290 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LPY95_08290 PF10531 SLBB domain LPY95_08295 PF00384 Molybdopterin oxidoreductase LPY95_08295 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal LPY95_08295 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LPY95_08300 PF00146 NADH dehydrogenase LPY95_08305 PF12838 4Fe-4S dicluster domain LPY95_08310 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LPY95_08315 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LPY95_08320 PF00361 Proton-conducting membrane transporter LPY95_08320 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LPY95_08325 PF00361 Proton-conducting membrane transporter LPY95_08325 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus LPY95_08330 PF00361 Proton-conducting membrane transporter LPY95_08340 PF02576 RimP N-terminal domain LPY95_08340 PF17384 RimP C-terminal SH3 domain LPY95_08345 PF13184 NusA-like KH domain LPY95_08345 PF08529 NusA N-terminal domain LPY95_08345 PF00575 S1 RNA binding domain LPY95_08350 PF00009 Elongation factor Tu GTP binding domain LPY95_08350 PF04760 Translation initiation factor IF-2, N-terminal region LPY95_08350 PF08364 Bacterial translation initiation factor IF-2 associated region LPY95_08350 PF11987 Translation-initiation factor 2 LPY95_08355 PF02033 Ribosome-binding factor A LPY95_08360 PF16198 tRNA pseudouridylate synthase B C-terminal domain LPY95_08360 PF01509 TruB family pseudouridylate synthase (N terminal domain) LPY95_08360 PF09157 Pseudouridine synthase II TruB, C-terminal LPY95_08365 PF00312 Ribosomal protein S15 LPY95_08370 PF00013 KH domain LPY95_08370 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LPY95_08370 PF00575 S1 RNA binding domain LPY95_08370 PF01138 3' exoribonuclease family, domain 1 LPY95_08370 PF03725 3' exoribonuclease family, domain 2 LPY95_08380 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LPY95_08380 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LPY95_08390 PF00731 AIR carboxylase LPY95_08395 PF02222 ATP-grasp domain LPY95_08395 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LPY95_08400 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LPY95_08400 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LPY95_08405 PF00462 Glutaredoxin LPY95_08415 PF01914 MarC family integral membrane protein LPY95_08420 PF00593 TonB dependent receptor LPY95_08425 PF03641 Possible lysine decarboxylase LPY95_08425 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases LPY95_08425 PF11892 Domain of unknown function (DUF3412) LPY95_08430 PF00114 Pilin (bacterial filament) LPY95_08430 PF07963 Prokaryotic N-terminal methylation motif LPY95_08450 PF05567 Neisseria PilC beta-propeller domain LPY95_08485 PF02534 Type IV secretory system Conjugative DNA transfer LPY95_08505 PF03743 Bacterial conjugation TrbI-like protein LPY95_08510 PF00437 Type II/IV secretion system protein LPY95_08515 PF01464 Transglycosylase SLT domain LPY95_08525 PF05101 Type IV secretory pathway, VirB3-like protein LPY95_08530 PF03135 CagE, TrbE, VirB family, component of type IV transporter system LPY95_08595 PF10566 Glycoside hydrolase 97 LPY95_08595 PF14508 Glycosyl-hydrolase 97 N-terminal LPY95_08595 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation LPY95_08600 PF13439 Glycosyltransferase Family 4 LPY95_08600 PF00534 Glycosyl transferases group 1 LPY95_08605 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LPY95_08610 PF00128 Alpha amylase, catalytic domain LPY95_08610 PF00686 Starch binding domain LPY95_08615 PF00356 Bacterial regulatory proteins, lacI family LPY95_08620 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LPY95_08620 PF03129 Anticodon binding domain LPY95_08620 PF02824 TGS domain LPY95_08620 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LPY95_08625 PF00707 Translation initiation factor IF-3, C-terminal domain LPY95_08625 PF05198 Translation initiation factor IF-3, N-terminal domain LPY95_08630 PF01632 Ribosomal protein L35 LPY95_08635 PF00453 Ribosomal protein L20 LPY95_08640 PF01409 tRNA synthetases class II core domain (F) LPY95_08640 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LPY95_08645 PF01588 Putative tRNA binding domain LPY95_08645 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LPY95_08645 PF03483 B3/4 domain LPY95_08645 PF03484 tRNA synthetase B5 domain LPY95_08645 PF03147 Ferredoxin-fold anticodon binding domain LPY95_08650 PF00216 Bacterial DNA-binding protein LPY95_08655 PF13411 MerR HTH family regulatory protein LPY95_08675 PF02397 Bacterial sugar transferase LPY95_08695 PF13439 Glycosyltransferase Family 4 LPY95_08695 PF00534 Glycosyl transferases group 1 LPY95_08705 PF14667 Polysaccharide biosynthesis C-terminal domain LPY95_08720 PF03808 Glycosyl transferase WecB/TagA/CpsF family LPY95_08735 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LPY95_08735 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LPY95_08740 PF16123 Hydroxyacylglutathione hydrolase C-terminus LPY95_08740 PF00753 Metallo-beta-lactamase superfamily LPY95_08745 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family LPY95_08765 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LPY95_08765 PF02779 Transketolase, pyrimidine binding domain LPY95_08765 PF02780 Transketolase, C-terminal domain LPY95_08775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LPY95_08775 PF02770 Acyl-CoA dehydrogenase, middle domain LPY95_08775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LPY95_08775 PF12806 Acetyl-CoA dehydrogenase C-terminal like LPY95_08790 PF08212 Lipocalin-like domain LPY95_08820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_08820 PF13426 PAS domain LPY95_08820 PF00072 Response regulator receiver domain LPY95_08825 PF04362 Bacterial Fe(2+) trafficking LPY95_08830 PF00730 HhH-GPD superfamily base excision DNA repair protein LPY95_08830 PF10576 Iron-sulfur binding domain of endonuclease III LPY95_08830 PF00633 Helix-hairpin-helix motif LPY95_08830 PF14815 NUDIX domain LPY95_08835 PF02881 SRP54-type protein, helical bundle domain LPY95_08835 PF00448 SRP54-type protein, GTPase domain LPY95_08845 PF05544 Proline racemase LPY95_08850 PF01266 FAD dependent oxidoreductase LPY95_08860 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPY95_08860 PF04324 BFD-like [2Fe-2S] binding domain LPY95_08865 PF00701 Dihydrodipicolinate synthetase family LPY95_08870 PF00171 Aldehyde dehydrogenase family LPY95_08875 PF01321 Creatinase/Prolidase N-terminal domain LPY95_08875 PF00557 Metallopeptidase family M24 LPY95_08890 PF13520 Amino acid permease LPY95_08915 PF09286 Pro-kumamolisin, activation domain LPY95_08915 PF00082 Subtilase family LPY95_08925 PF00593 TonB dependent receptor LPY95_08925 PF07715 TonB-dependent Receptor Plug Domain LPY95_08930 PF07532 Bacterial Ig-like domain (group 4) LPY95_08935 PF04616 Glycosyl hydrolases family 43 LPY95_08945 PF00593 TonB dependent receptor LPY95_08945 PF07715 TonB-dependent Receptor Plug Domain LPY95_08980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_08980 PF00183 Hsp90 protein LPY95_08990 PF01467 Cytidylyltransferase-like LPY95_09000 PF00037 4Fe-4S binding domain LPY95_09010 PF00759 Glycosyl hydrolase family 9 LPY95_09010 PF02927 Cellulase N-terminal ig-like domain LPY95_09060 PF02547 Queuosine biosynthesis protein LPY95_09065 PF01702 Queuine tRNA-ribosyltransferase LPY95_09070 PF02699 Preprotein translocase subunit LPY95_09075 PF02355 Protein export membrane protein LPY95_09075 PF13721 SecD export protein N-terminal TM region LPY95_09075 PF07549 SecD/SecF GG Motif LPY95_09080 PF02355 Protein export membrane protein LPY95_09080 PF07549 SecD/SecF GG Motif LPY95_09110 PF02796 Helix-turn-helix domain of resolvase LPY95_09110 PF00665 Integrase core domain LPY95_09140 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LPY95_09145 PF00294 pfkB family carbohydrate kinase LPY95_09150 PF05524 PEP-utilising enzyme, N-terminal LPY95_09150 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LPY95_09150 PF00381 PTS HPr component phosphorylation site LPY95_09150 PF02896 PEP-utilising enzyme, TIM barrel domain LPY95_09150 PF00391 PEP-utilising enzyme, mobile domain LPY95_09155 PF00356 Bacterial regulatory proteins, lacI family LPY95_09160 PF00873 AcrB/AcrD/AcrF family LPY95_09165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPY95_09165 PF00529 HlyD membrane-fusion protein of T1SS LPY95_09175 PF05088 Bacterial NAD-glutamate dehydrogenase LPY95_09185 PF07690 Major Facilitator Superfamily LPY95_09190 PF00072 Response regulator receiver domain LPY95_09195 PF01627 Hpt domain LPY95_09195 PF00072 Response regulator receiver domain LPY95_09195 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LPY95_09195 PF00512 His Kinase A (phospho-acceptor) domain LPY95_09195 PF00672 HAMP domain LPY95_09195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_09200 PF04286 Protein of unknown function (DUF445) LPY95_09210 PF00202 Aminotransferase class-III LPY95_09215 PF07690 Major Facilitator Superfamily LPY95_09220 PF02634 FdhD/NarQ family LPY95_09225 PF00384 Molybdopterin oxidoreductase LPY95_09235 PF00083 Sugar (and other) transporter LPY95_09235 PF07690 Major Facilitator Superfamily LPY95_09240 PF01814 Hemerythrin HHE cation binding domain LPY95_09245 PF00990 Diguanylate cyclase, GGDEF domain LPY95_09245 PF00072 Response regulator receiver domain LPY95_09250 PF01266 FAD dependent oxidoreductase LPY95_09255 PF00120 Glutamine synthetase, catalytic domain LPY95_09260 PF07722 Peptidase C26 LPY95_09265 PF00120 Glutamine synthetase, catalytic domain LPY95_09270 PF00202 Aminotransferase class-III LPY95_09275 PF13416 Bacterial extracellular solute-binding protein LPY95_09280 PF13533 Biotin-lipoyl like LPY95_09285 PF07690 Major Facilitator Superfamily LPY95_09290 PF02321 Outer membrane efflux protein LPY95_09295 PF00005 ABC transporter LPY95_09295 PF08402 TOBE domain LPY95_09300 PF00528 Binding-protein-dependent transport system inner membrane component LPY95_09305 PF00528 Binding-protein-dependent transport system inner membrane component LPY95_09310 PF00171 Aldehyde dehydrogenase family LPY95_09325 PF00571 CBS domain LPY95_09325 PF03471 Transporter associated domain LPY95_09335 PF02130 Uncharacterized protein family UPF0054 LPY95_09345 PF02562 PhoH-like protein LPY95_09350 PF04055 Radical SAM superfamily LPY95_09350 PF01938 TRAM domain LPY95_09350 PF00919 Uncharacterized protein family UPF0004 LPY95_09365 PF01464 Transglycosylase SLT domain LPY95_09370 PF00355 Rieske [2Fe-2S] domain LPY95_09370 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal LPY95_09375 PF00033 Cytochrome b/b6/petB LPY95_09375 PF00032 Cytochrome b(C-terminal)/b6/petD LPY95_09380 PF02167 Cytochrome C1 family LPY95_09385 PF02798 Glutathione S-transferase, N-terminal domain LPY95_09385 PF00043 Glutathione S-transferase, C-terminal domain LPY95_09390 PF04386 Stringent starvation protein B LPY95_09410 PF00271 Helicase conserved C-terminal domain LPY95_09410 PF08494 DEAD/H associated LPY95_09410 PF00270 DEAD/DEAH box helicase LPY95_09415 PF02245 Methylpurine-DNA glycosylase (MPG) LPY95_09420 PF02203 Tar ligand binding domain homologue LPY95_09420 PF00672 HAMP domain LPY95_09420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LPY95_09425 PF01584 CheW-like domain LPY95_09460 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LPY95_09460 PF14850 DNA-binding domain of Proline dehydrogenase LPY95_09460 PF01619 Proline dehydrogenase LPY95_09460 PF00171 Aldehyde dehydrogenase family LPY95_09515 PF00589 Phage integrase family LPY95_09535 PF04679 ATP dependent DNA ligase C terminal region LPY95_09535 PF01068 ATP dependent DNA ligase domain LPY95_09535 PF13298 DNA polymerase Ligase (LigD) LPY95_09540 PF01612 3'-5' exonuclease LPY95_09540 PF00570 HRDC domain LPY95_09550 PF03781 Sulfatase-modifying factor enzyme 1 LPY95_09560 PF13742 OB-fold nucleic acid binding domain LPY95_09560 PF02601 Exonuclease VII, large subunit LPY95_09565 PF08331 Domain of unknown function (DUF1730) LPY95_09570 PF01256 Carbohydrate kinase LPY95_09570 PF03853 YjeF-related protein N-terminus LPY95_09575 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LPY95_09580 PF01520 N-acetylmuramoyl-L-alanine amidase LPY95_09580 PF11741 AMIN domain LPY95_09585 PF01119 DNA mismatch repair protein, C-terminal domain LPY95_09585 PF08676 MutL C terminal dimerisation domain LPY95_09605 PF07879 PHB/PHA accumulation regulator DNA-binding domain LPY95_09605 PF05233 PHB accumulation regulatory domain LPY95_09610 PF00106 short chain dehydrogenase LPY95_09615 PF00749 tRNA synthetases class I (E and Q), catalytic domain LPY95_09620 PF01435 Peptidase family M48 LPY95_09625 PF00563 EAL domain LPY95_09625 PF00072 Response regulator receiver domain LPY95_09625 PF00990 Diguanylate cyclase, GGDEF domain LPY95_09635 PF07152 YaeQ protein LPY95_09640 PF00313 'Cold-shock' DNA-binding domain LPY95_09645 PF14497 Glutathione S-transferase, C-terminal domain LPY95_09645 PF02798 Glutathione S-transferase, N-terminal domain LPY95_09650 PF00135 Carboxylesterase family LPY95_09655 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LPY95_09660 PF00156 Phosphoribosyl transferase domain LPY95_09665 PF03880 DbpA RNA binding domain LPY95_09665 PF00270 DEAD/DEAH box helicase LPY95_09665 PF00271 Helicase conserved C-terminal domain LPY95_09670 PF00005 ABC transporter LPY95_09670 PF16326 ABC transporter C-terminal domain LPY95_09670 PF12848 ABC transporter LPY95_09680 PF00545 ribonuclease LPY95_09685 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LPY95_09685 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LPY95_09690 PF00459 Inositol monophosphatase family LPY95_09695 PF00588 SpoU rRNA Methylase family LPY95_09705 PF00990 Diguanylate cyclase, GGDEF domain LPY95_09705 PF00563 EAL domain LPY95_09705 PF13188 PAS domain LPY95_09705 PF03707 Bacterial signalling protein N terminal repeat LPY95_09710 PF04055 Radical SAM superfamily LPY95_09715 PF08207 Elongation factor P (EF-P) KOW-like domain LPY95_09715 PF09285 Elongation factor P, C-terminal LPY95_09715 PF01132 Elongation factor P (EF-P) OB domain LPY95_09725 PF01979 Amidohydrolase family LPY95_09735 PF13419 Haloacid dehalogenase-like hydrolase LPY95_09745 PF00295 Glycosyl hydrolases family 28 LPY95_09780 PF00753 Metallo-beta-lactamase superfamily LPY95_09790 PF05985 Ethanolamine ammonia-lyase light chain (EutC) LPY95_09795 PF06751 Ethanolamine ammonia lyase large subunit (EutB) LPY95_09810 PF01551 Peptidase family M23 LPY95_09810 PF08460 Bacterial SH3 domain LPY95_09815 PF01979 Amidohydrolase family LPY95_09820 PF01809 Putative membrane protein insertion efficiency factor LPY95_09830 PF01258 Prokaryotic dksA/traR C4-type zinc finger LPY95_09840 PF02657 Fe-S metabolism associated domain LPY95_09845 PF01406 tRNA synthetases class I (C) catalytic domain LPY95_09845 PF09190 DALR domain LPY95_09855 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LPY95_09855 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LPY95_09860 PF00764 Arginosuccinate synthase LPY95_09870 PF01546 Peptidase family M20/M25/M40 LPY95_09870 PF07687 Peptidase dimerisation domain LPY95_09875 PF00696 Amino acid kinase family LPY95_09875 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase LPY95_09885 PF01118 Semialdehyde dehydrogenase, NAD binding domain LPY95_09890 PF00206 Lyase LPY95_09900 PF00696 Amino acid kinase family LPY95_09900 PF01472 PUA domain LPY95_09905 PF00171 Aldehyde dehydrogenase family LPY95_09910 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain LPY95_09910 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LPY95_09930 PF02322 Cytochrome bd terminal oxidase subunit II LPY95_09935 PF01654 Cytochrome bd terminal oxidase subunit I LPY95_09940 PF00005 ABC transporter LPY95_09940 PF00664 ABC transporter transmembrane region LPY95_09945 PF00664 ABC transporter transmembrane region LPY95_09945 PF00005 ABC transporter LPY95_09950 PF00313 'Cold-shock' DNA-binding domain LPY95_09955 PF00561 alpha/beta hydrolase fold LPY95_09965 PF03918 Cytochrome C biogenesis protein LPY95_09970 PF08534 Redoxin LPY95_09975 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LPY95_09975 PF01578 Cytochrome C assembly protein LPY95_09980 PF03100 CcmE LPY95_09990 PF01578 Cytochrome C assembly protein LPY95_09995 PF03379 CcmB protein LPY95_10000 PF00005 ABC transporter LPY95_10005 PF00155 Aminotransferase class I and II LPY95_10010 PF00795 Carbon-nitrogen hydrolase LPY95_10025 PF01479 S4 domain LPY95_10025 PF00849 RNA pseudouridylate synthase LPY95_10030 PF04079 Segregation and condensation complex subunit ScpB LPY95_10035 PF02616 Segregation and condensation protein ScpA LPY95_10040 PF03795 YCII-related domain LPY95_10050 PF00356 Bacterial regulatory proteins, lacI family LPY95_10070 PF00528 Binding-protein-dependent transport system inner membrane component LPY95_10075 PF00528 Binding-protein-dependent transport system inner membrane component LPY95_10100 PF00795 Carbon-nitrogen hydrolase LPY95_10105 PF04371 Porphyromonas-type peptidyl-arginine deiminase LPY95_10115 PF00444 Ribosomal protein L36 LPY95_10120 PF02224 Cytidylate kinase LPY95_10125 PF00575 S1 RNA binding domain LPY95_10130 PF00216 Bacterial DNA-binding protein LPY95_10140 PF18073 Rubredoxin metal binding domain LPY95_10150 PF02719 Polysaccharide biosynthesis protein LPY95_10155 PF00483 Nucleotidyl transferase LPY95_10160 PF00999 Sodium/hydrogen exchanger family LPY95_10160 PF02254 TrkA-N domain LPY95_10170 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LPY95_10170 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LPY95_10175 PF00571 CBS domain LPY95_10175 PF00478 IMP dehydrogenase / GMP reductase domain LPY95_10180 PF02540 NAD synthase LPY95_10180 PF00117 Glutamine amidotransferase class-I LPY95_10180 PF00958 GMP synthase C terminal domain LPY95_10185 PF13356 Arm DNA-binding domain LPY95_10185 PF00589 Phage integrase family LPY95_10220 PF00107 Zinc-binding dehydrogenase LPY95_10220 PF08240 Alcohol dehydrogenase GroES-like domain LPY95_10230 PF00248 Aldo/keto reductase family LPY95_10250 PF02534 Type IV secretory system Conjugative DNA transfer LPY95_10275 PF03135 CagE, TrbE, VirB family, component of type IV transporter system LPY95_10290 PF04610 TrbL/VirB6 plasmid conjugal transfer protein LPY95_10300 PF03524 Conjugal transfer protein LPY95_10305 PF03743 Bacterial conjugation TrbI-like protein LPY95_10315 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) LPY95_10320 PF00361 Proton-conducting membrane transporter LPY95_10320 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LPY95_10320 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus LPY95_10325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPY95_10325 PF03466 LysR substrate binding domain LPY95_10345 PF00072 Response regulator receiver domain LPY95_10345 PF00196 Bacterial regulatory proteins, luxR family LPY95_10365 PF00857 Isochorismatase family LPY95_10375 PF00929 Exonuclease LPY95_10380 PF14437 MafB19-like deaminase LPY95_10385 PF02742 Iron dependent repressor, metal binding and dimerisation domain LPY95_10385 PF01325 Iron dependent repressor, N-terminal DNA binding domain LPY95_10390 PF01566 Natural resistance-associated macrophage protein LPY95_10395 PF00561 alpha/beta hydrolase fold LPY95_10410 PF05977 Transmembrane secretion effector LPY95_10415 PF07969 Amidohydrolase family LPY95_10420 PF00924 Mechanosensitive ion channel LPY95_10420 PF05552 Conserved TM helix LPY95_10425 PF00391 PEP-utilising enzyme, mobile domain LPY95_10425 PF02896 PEP-utilising enzyme, TIM barrel domain LPY95_10425 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LPY95_10430 PF03618 Kinase/pyrophosphorylase LPY95_10450 PF01066 CDP-alcohol phosphatidyltransferase LPY95_10460 PF00561 alpha/beta hydrolase fold LPY95_10475 PF00355 Rieske [2Fe-2S] domain LPY95_10475 PF01266 FAD dependent oxidoreductase LPY95_10485 PF16921 Tex protein YqgF-like domain LPY95_10485 PF09371 Tex-like protein N-terminal domain LPY95_10485 PF00575 S1 RNA binding domain LPY95_10485 PF17674 HHH domain LPY95_10490 PF00072 Response regulator receiver domain LPY95_10490 PF09308 LuxQ, periplasmic LPY95_10490 PF00512 His Kinase A (phospho-acceptor) domain LPY95_10490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_10530 PF00034 Cytochrome c LPY95_10540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPY95_10545 PF00873 AcrB/AcrD/AcrF family LPY95_10565 PF01081 KDPG and KHG aldolase LPY95_10570 PF00920 Dehydratase family LPY95_10575 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LPY95_10580 PF02685 Glucokinase LPY95_10585 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LPY95_10585 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LPY95_10590 PF00005 ABC transporter LPY95_10590 PF17912 MalK OB fold domain LPY95_10605 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LPY95_10610 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LPY95_10615 PF00890 FAD binding domain LPY95_10615 PF02910 Fumarate reductase flavoprotein C-term LPY95_10625 PF13085 2Fe-2S iron-sulfur cluster binding domain LPY95_10630 PF03937 Flavinator of succinate dehydrogenase LPY95_10640 PF02687 FtsX-like permease family LPY95_10640 PF12704 MacB-like periplasmic core domain LPY95_10645 PF00005 ABC transporter LPY95_10655 PF00753 Metallo-beta-lactamase superfamily LPY95_10655 PF03772 Competence protein LPY95_10660 PF01618 MotA/TolQ/ExbB proton channel family LPY95_10670 PF00664 ABC transporter transmembrane region LPY95_10670 PF00005 ABC transporter LPY95_10675 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LPY95_10680 PF02348 Cytidylyltransferase LPY95_10685 PF01451 Low molecular weight phosphotyrosine protein phosphatase LPY95_10695 PF01541 GIY-YIG catalytic domain LPY95_10695 PF02151 UvrB/uvrC motif LPY95_10695 PF08459 UvrC Helix-hairpin-helix N-terminal LPY95_10700 PF01066 CDP-alcohol phosphatidyltransferase LPY95_10720 PF13356 Arm DNA-binding domain LPY95_10720 PF00589 Phage integrase family LPY95_10735 PF03466 LysR substrate binding domain LPY95_10735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPY95_10745 PF01695 IstB-like ATP binding protein LPY95_10750 PF00665 Integrase core domain LPY95_10750 PF02796 Helix-turn-helix domain of resolvase LPY95_10765 PF00580 UvrD/REP helicase N-terminal domain LPY95_10765 PF12705 PD-(D/E)XK nuclease superfamily LPY95_10765 PF13361 UvrD-like helicase C-terminal domain LPY95_10770 PF11398 Protein of unknown function (DUF2813) LPY95_10810 PF01695 IstB-like ATP binding protein LPY95_10815 PF00665 Integrase core domain LPY95_10815 PF02796 Helix-turn-helix domain of resolvase LPY95_10835 PF04610 TrbL/VirB6 plasmid conjugal transfer protein LPY95_10915 PF02796 Helix-turn-helix domain of resolvase LPY95_10915 PF00665 Integrase core domain LPY95_10975 PF17837 4'-phosphopantetheinyl transferase N-terminal domain LPY95_10975 PF01648 4'-phosphopantetheinyl transferase superfamily LPY95_10985 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LPY95_10985 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LPY95_10985 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LPY95_10995 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPY95_11005 PF00581 Rhodanese-like domain LPY95_11005 PF17773 UPF0176 acylphosphatase like domain LPY95_11010 PF00196 Bacterial regulatory proteins, luxR family LPY95_11010 PF00072 Response regulator receiver domain LPY95_11015 PF12111 Polyribonucleotide phosphorylase C terminal LPY95_11015 PF00575 S1 RNA binding domain LPY95_11015 PF10150 Ribonuclease E/G family LPY95_11020 PF00849 RNA pseudouridylate synthase LPY95_11020 PF01479 S4 domain LPY95_11025 PF11737 Protein of unknown function (DUF3300) LPY95_11030 PF02535 ZIP Zinc transporter LPY95_11040 PF01329 Pterin 4 alpha carbinolamine dehydratase LPY95_11045 PF01106 NifU-like domain LPY95_11075 PF02796 Helix-turn-helix domain of resolvase LPY95_11075 PF00665 Integrase core domain LPY95_11080 PF01695 IstB-like ATP binding protein LPY95_11120 PF17091 Inovirus G7P protein LPY95_11160 PF01494 FAD binding domain LPY95_11165 PF09335 SNARE associated Golgi protein LPY95_11175 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LPY95_11180 PF07995 Glucose / Sorbosone dehydrogenase LPY95_11190 PF00144 Beta-lactamase LPY95_11200 PF04397 LytTr DNA-binding domain LPY95_11200 PF00072 Response regulator receiver domain LPY95_11205 PF07694 5TMR of 5TMR-LYT LPY95_11205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_11205 PF06580 Histidine kinase LPY95_11215 PF03797 Autotransporter beta-domain LPY95_11215 PF00082 Subtilase family LPY95_11220 PF00529 HlyD membrane-fusion protein of T1SS LPY95_11220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPY95_11225 PF00873 AcrB/AcrD/AcrF family LPY95_11235 PF00072 Response regulator receiver domain LPY95_11235 PF13426 PAS domain LPY95_11235 PF08448 PAS fold LPY95_11235 PF00512 His Kinase A (phospho-acceptor) domain LPY95_11235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_11240 PF00196 Bacterial regulatory proteins, luxR family LPY95_11240 PF00072 Response regulator receiver domain LPY95_11245 PF12951 Passenger-associated-transport-repeat LPY95_11245 PF12951 Passenger-associated-transport-repeat LPY95_11265 PF00156 Phosphoribosyl transferase domain LPY95_11310 PF02796 Helix-turn-helix domain of resolvase LPY95_11310 PF00665 Integrase core domain LPY95_11315 PF01695 IstB-like ATP binding protein LPY95_11350 PF01526 Tn3 transposase DDE domain LPY95_11350 PF13700 Domain of unknown function (DUF4158) LPY95_11385 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LPY95_11390 PF03377 TAL effector repeat LPY95_11395 PF01381 Helix-turn-helix LPY95_11415 PF02796 Helix-turn-helix domain of resolvase LPY95_11415 PF00239 Resolvase, N terminal domain LPY95_11420 PF01555 DNA methylase LPY95_11425 PF09571 XcyI restriction endonuclease LPY95_11460 PF00145 C-5 cytosine-specific DNA methylase LPY95_11510 PF08240 Alcohol dehydrogenase GroES-like domain LPY95_11510 PF13823 Alcohol dehydrogenase GroES-associated LPY95_11510 PF00107 Zinc-binding dehydrogenase LPY95_11550 PF00899 ThiF family LPY95_11555 PF03454 MoeA C-terminal region (domain IV) LPY95_11555 PF00994 Probable molybdopterin binding domain LPY95_11555 PF03453 MoeA N-terminal region (domain I and II) LPY95_11565 PF01011 PQQ enzyme repeat LPY95_11565 PF13360 PQQ-like domain LPY95_11575 PF13464 Domain of unknown function (DUF4115) LPY95_11585 PF04055 Radical SAM superfamily LPY95_11590 PF00334 Nucleoside diphosphate kinase LPY95_11600 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LPY95_11600 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LPY95_11600 PF00378 Enoyl-CoA hydratase/isomerase LPY95_11605 PF00108 Thiolase, N-terminal domain LPY95_11605 PF02803 Thiolase, C-terminal domain LPY95_11610 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LPY95_11615 PF00004 ATPase family associated with various cellular activities (AAA) LPY95_11615 PF12002 MgsA AAA+ ATPase C terminal LPY95_11615 PF16193 AAA C-terminal domain LPY95_11625 PF03548 Outer membrane lipoprotein carrier protein LolA LPY95_11635 PF17854 FtsK alpha domain LPY95_11635 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LPY95_11635 PF09397 Ftsk gamma domain LPY95_11635 PF01580 FtsK/SpoIIIE family LPY95_11640 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPY95_11650 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LPY95_11655 PF01176 Translation initiation factor 1A / IF-1 LPY95_11660 PF00004 ATPase family associated with various cellular activities (AAA) LPY95_11660 PF07724 AAA domain (Cdc48 subfamily) LPY95_11660 PF17871 AAA lid domain LPY95_11660 PF02861 Clp amino terminal domain, pathogenicity island component LPY95_11660 PF10431 C-terminal, D2-small domain, of ClpB protein LPY95_11665 PF02617 ATP-dependent Clp protease adaptor protein ClpS LPY95_11670 PF00293 NUDIX domain LPY95_11680 PF04356 Protein of unknown function (DUF489) LPY95_11685 PF12729 Four helix bundle sensory module for signal transduction LPY95_11685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LPY95_11685 PF00672 HAMP domain LPY95_11695 PF00563 EAL domain LPY95_11695 PF00990 Diguanylate cyclase, GGDEF domain LPY95_11695 PF03707 Bacterial signalling protein N terminal repeat LPY95_11700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_11700 PF07730 Histidine kinase LPY95_11705 PF00563 EAL domain LPY95_11705 PF00990 Diguanylate cyclase, GGDEF domain LPY95_11705 PF03707 Bacterial signalling protein N terminal repeat LPY95_11710 PF13188 PAS domain LPY95_11710 PF00512 His Kinase A (phospho-acceptor) domain LPY95_11710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_11710 PF13426 PAS domain LPY95_11710 PF00989 PAS fold LPY95_11730 PF01584 CheW-like domain LPY95_11730 PF00072 Response regulator receiver domain LPY95_11740 PF00460 Flagella basal body rod protein LPY95_11740 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LPY95_11745 PF03963 Flagellar hook capping protein - N-terminal region LPY95_11750 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LPY95_11750 PF00460 Flagella basal body rod protein LPY95_11750 PF07559 Flagellar basal body protein FlaE LPY95_11755 PF00460 Flagella basal body rod protein LPY95_11755 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LPY95_11765 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LPY95_11765 PF00460 Flagella basal body rod protein LPY95_11770 PF02107 Flagellar L-ring protein LPY95_11775 PF02119 Flagellar P-ring protein LPY95_11780 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LPY95_11780 PF10135 Rod binding protein LPY95_11785 PF07196 Flagellin hook IN motif LPY95_11785 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LPY95_11790 PF00669 Bacterial flagellin N-terminal helical region LPY95_11790 PF00700 Bacterial flagellin C-terminal helical region LPY95_11795 PF00700 Bacterial flagellin C-terminal helical region LPY95_11795 PF00669 Bacterial flagellin N-terminal helical region LPY95_11805 PF02465 Flagellar hook-associated protein 2 N-terminus LPY95_11805 PF07195 Flagellar hook-associated protein 2 C-terminus LPY95_11805 PF07196 Flagellin hook IN motif LPY95_11810 PF02561 Flagellar protein FliS LPY95_11825 PF00196 Bacterial regulatory proteins, luxR family LPY95_11825 PF00072 Response regulator receiver domain LPY95_11830 PF04963 Sigma-54 factor, core binding domain LPY95_11830 PF04552 Sigma-54, DNA binding domain LPY95_11830 PF00309 Sigma-54 factor, Activator interacting domain (AID) LPY95_11835 PF01339 CheB methylesterase LPY95_11835 PF00072 Response regulator receiver domain LPY95_11840 PF00158 Sigma-54 interaction domain LPY95_11840 PF02954 Bacterial regulatory protein, Fis family LPY95_11840 PF06490 Flagellar regulatory protein FleQ LPY95_11845 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LPY95_11855 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LPY95_11855 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LPY95_11905 PF00534 Glycosyl transferases group 1 LPY95_11905 PF00535 Glycosyl transferase family 2 LPY95_11910 PF02049 Flagellar hook-basal body complex protein FliE LPY95_11915 PF01514 Secretory protein of YscJ/FliF family LPY95_11915 PF08345 Flagellar M-ring protein C-terminal LPY95_11920 PF14841 FliG middle domain LPY95_11920 PF01706 FliG C-terminal domain LPY95_11920 PF14842 FliG N-terminal domain LPY95_11930 PF18269 T3SS EscN ATPase C-terminal domain LPY95_11930 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LPY95_11950 PF02154 Flagellar motor switch protein FliM LPY95_11950 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LPY95_11955 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LPY95_11960 PF04347 Flagellar biosynthesis protein, FliO LPY95_11965 PF00813 FliP family LPY95_11970 PF01313 Bacterial export proteins, family 3 LPY95_11975 PF01311 Bacterial export proteins, family 1 LPY95_11980 PF00990 Diguanylate cyclase, GGDEF domain LPY95_11985 PF00990 Diguanylate cyclase, GGDEF domain LPY95_11990 PF00563 EAL domain LPY95_11990 PF00990 Diguanylate cyclase, GGDEF domain LPY95_11990 PF03707 Bacterial signalling protein N terminal repeat LPY95_11995 PF01312 FlhB HrpN YscU SpaS Family LPY95_12000 PF00771 FHIPEP family LPY95_12005 PF00448 SRP54-type protein, GTPase domain LPY95_12010 PF10609 NUBPL iron-transfer P-loop NTPase LPY95_12015 PF04545 Sigma-70, region 4 LPY95_12015 PF04539 Sigma-70 region 3 LPY95_12015 PF04542 Sigma-70 region 2 LPY95_12020 PF00072 Response regulator receiver domain LPY95_12025 PF04344 Chemotaxis phosphatase, CheZ LPY95_12030 PF01584 CheW-like domain LPY95_12030 PF02895 Signal transducing histidine kinase, homodimeric domain LPY95_12030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_12030 PF01627 Hpt domain LPY95_12030 PF00072 Response regulator receiver domain LPY95_12100 PF13614 AAA domain LPY95_12115 PF01618 MotA/TolQ/ExbB proton channel family LPY95_12120 PF13677 Membrane MotB of proton-channel complex MotA/MotB LPY95_12120 PF00691 OmpA family LPY95_12125 PF13614 AAA domain LPY95_12130 PF01584 CheW-like domain LPY95_12140 PF00072 Response regulator receiver domain LPY95_12145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_12145 PF02895 Signal transducing histidine kinase, homodimeric domain LPY95_12145 PF09078 CheY binding LPY95_12145 PF01627 Hpt domain LPY95_12145 PF01584 CheW-like domain LPY95_12150 PF00672 HAMP domain LPY95_12150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LPY95_12150 PF02203 Tar ligand binding domain homologue LPY95_12165 PF08269 Cache domain LPY95_12165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LPY95_12170 PF00672 HAMP domain LPY95_12170 PF02203 Tar ligand binding domain homologue LPY95_12170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LPY95_12180 PF02203 Tar ligand binding domain homologue LPY95_12180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LPY95_12180 PF00672 HAMP domain LPY95_12185 PF00672 HAMP domain LPY95_12185 PF02203 Tar ligand binding domain homologue LPY95_12185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LPY95_12190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LPY95_12190 PF00672 HAMP domain LPY95_12190 PF02203 Tar ligand binding domain homologue LPY95_12205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LPY95_12205 PF00672 HAMP domain LPY95_12205 PF02203 Tar ligand binding domain homologue LPY95_12210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LPY95_12210 PF00672 HAMP domain LPY95_12210 PF02203 Tar ligand binding domain homologue LPY95_12215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LPY95_12215 PF00672 HAMP domain LPY95_12215 PF02203 Tar ligand binding domain homologue LPY95_12225 PF02203 Tar ligand binding domain homologue LPY95_12225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LPY95_12225 PF00672 HAMP domain LPY95_12230 PF07238 PilZ domain LPY95_12230 PF07317 Flagellar regulator YcgR LPY95_12235 PF01584 CheW-like domain LPY95_12245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LPY95_12245 PF02203 Tar ligand binding domain homologue LPY95_12245 PF00672 HAMP domain LPY95_12250 PF01739 CheR methyltransferase, SAM binding domain LPY95_12250 PF03705 CheR methyltransferase, all-alpha domain LPY95_12255 PF03975 CheD chemotactic sensory transduction LPY95_12260 PF00072 Response regulator receiver domain LPY95_12260 PF01339 CheB methylesterase LPY95_12265 PF00990 Diguanylate cyclase, GGDEF domain LPY95_12265 PF03707 Bacterial signalling protein N terminal repeat LPY95_12265 PF00563 EAL domain LPY95_12270 PF00561 alpha/beta hydrolase fold LPY95_12275 PF06434 Aconitate hydratase 2 N-terminus LPY95_12275 PF00330 Aconitase family (aconitate hydratase) LPY95_12275 PF11791 Aconitate B N-terminal domain LPY95_12290 PF00694 Aconitase C-terminal domain LPY95_12290 PF00330 Aconitase family (aconitate hydratase) LPY95_12300 PF00501 AMP-binding enzyme LPY95_12300 PF13193 AMP-binding enzyme C-terminal domain LPY95_12305 PF00378 Enoyl-CoA hydratase/isomerase LPY95_12310 PF00512 His Kinase A (phospho-acceptor) domain LPY95_12310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_12310 PF01627 Hpt domain LPY95_12310 PF00072 Response regulator receiver domain LPY95_12315 PF00072 Response regulator receiver domain LPY95_12320 PF00152 tRNA synthetases class II (D, K and N) LPY95_12320 PF01336 OB-fold nucleic acid binding domain LPY95_12330 PF00072 Response regulator receiver domain LPY95_12330 PF04397 LytTr DNA-binding domain LPY95_12365 PF01368 DHH family LPY95_12365 PF02272 DHHA1 domain LPY95_12365 PF17768 RecJ OB domain LPY95_12375 PF01272 Transcription elongation factor, GreA/GreB, C-term LPY95_12375 PF03449 Transcription elongation factor, N-terminal LPY95_12380 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LPY95_12380 PF02142 MGS-like domain LPY95_12380 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LPY95_12390 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LPY95_12390 PF00117 Glutamine amidotransferase class-I LPY95_12395 PF05173 Dihydrodipicolinate reductase, C-terminus LPY95_12395 PF01113 Dihydrodipicolinate reductase, N-terminus LPY95_12400 PF03473 MOSC domain LPY95_12400 PF03475 3-alpha domain LPY95_12405 PF00155 Aminotransferase class I and II LPY95_12420 PF07664 Ferrous iron transport protein B C terminus LPY95_12420 PF02421 Ferrous iron transport protein B LPY95_12420 PF07670 Nucleoside recognition LPY95_12430 PF00378 Enoyl-CoA hydratase/isomerase LPY95_12440 PF00682 HMGL-like LPY95_12445 PF00106 short chain dehydrogenase LPY95_12450 PF01132 Elongation factor P (EF-P) OB domain LPY95_12450 PF08207 Elongation factor P (EF-P) KOW-like domain LPY95_12450 PF09285 Elongation factor P, C-terminal LPY95_12470 PF02913 FAD linked oxidases, C-terminal domain LPY95_12470 PF01565 FAD binding domain LPY95_12475 PF01842 ACT domain LPY95_12475 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LPY95_12475 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LPY95_12485 PF13520 Amino acid permease LPY95_12490 PF13520 Amino acid permease LPY95_12495 PF00596 Class II Aldolase and Adducin N-terminal domain LPY95_12500 PF03079 ARD/ARD' family LPY95_12520 PF01502 Phosphoribosyl-AMP cyclohydrolase LPY95_12520 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LPY95_12525 PF00977 Histidine biosynthesis protein LPY95_12530 PF00977 Histidine biosynthesis protein LPY95_12535 PF00117 Glutamine amidotransferase class-I LPY95_12540 PF00475 Imidazoleglycerol-phosphate dehydratase LPY95_12545 PF00155 Aminotransferase class I and II LPY95_12550 PF00815 Histidinol dehydrogenase LPY95_12555 PF01634 ATP phosphoribosyltransferase LPY95_12555 PF08029 HisG, C-terminal domain LPY95_12565 PF03129 Anticodon binding domain LPY95_12565 PF13393 Histidyl-tRNA synthetase LPY95_12570 PF00027 Cyclic nucleotide-binding domain LPY95_12570 PF13545 Crp-like helix-turn-helix domain LPY95_12580 PF14821 Threonine synthase N terminus LPY95_12580 PF00291 Pyridoxal-phosphate dependent enzyme LPY95_12590 PF08544 GHMP kinases C terminal LPY95_12590 PF00288 GHMP kinases N terminal domain LPY95_12595 PF00696 Amino acid kinase family LPY95_12595 PF01842 ACT domain LPY95_12595 PF13840 ACT domain LPY95_12595 PF00742 Homoserine dehydrogenase LPY95_12595 PF03447 Homoserine dehydrogenase, NAD binding domain LPY95_12610 PF04829 Pre-toxin domain with VENN motif LPY95_12610 PF05860 haemagglutination activity domain LPY95_12610 PF13332 Hemagglutinin repeat LPY95_12610 PF13332 Hemagglutinin repeat LPY95_12610 PF05860 haemagglutination activity domain LPY95_12610 PF04829 Pre-toxin domain with VENN motif LPY95_12615 PF17287 POTRA domain LPY95_12615 PF08479 POTRA domain, ShlB-type LPY95_12615 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LPY95_12625 PF01522 Polysaccharide deacetylase LPY95_12625 PF14883 Hypothetical glycosyl hydrolase family 13 LPY95_12630 PF00535 Glycosyl transferase family 2 LPY95_12645 PF00171 Aldehyde dehydrogenase family LPY95_12660 PF01180 Dihydroorotate dehydrogenase LPY95_12665 PF01565 FAD binding domain LPY95_12665 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LPY95_12675 PF01177 Asp/Glu/Hydantoin racemase LPY95_12680 PF07690 Major Facilitator Superfamily LPY95_12690 PF01569 PAP2 superfamily LPY95_12695 PF04551 GcpE protein LPY95_12705 PF00072 Response regulator receiver domain LPY95_12710 PF02013 Cellulose or protein binding domain LPY95_12710 PF00150 Cellulase (glycosyl hydrolase family 5) LPY95_12715 PF00990 Diguanylate cyclase, GGDEF domain LPY95_12715 PF00360 Phytochrome region LPY95_12715 PF01590 GAF domain LPY95_12715 PF00563 EAL domain LPY95_12720 PF00474 Sodium:solute symporter family LPY95_12725 PF14310 Fibronectin type III-like domain LPY95_12725 PF00933 Glycosyl hydrolase family 3 N terminal domain LPY95_12725 PF01915 Glycosyl hydrolase family 3 C-terminal domain LPY95_12745 PF00342 Phosphoglucose isomerase LPY95_12750 PF02261 Aspartate decarboxylase LPY95_12755 PF02569 Pantoate-beta-alanine ligase LPY95_12760 PF02548 Ketopantoate hydroxymethyltransferase LPY95_12765 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LPY95_12770 PF12627 Probable RNA and SrmB- binding site of polymerase A LPY95_12770 PF01743 Poly A polymerase head domain LPY95_12770 PF12626 Polymerase A arginine-rich C-terminus LPY95_12780 PF02649 Type I GTP cyclohydrolase folE2 LPY95_12785 PF01520 N-acetylmuramoyl-L-alanine amidase LPY95_12805 PF00083 Sugar (and other) transporter LPY95_12815 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LPY95_12815 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LPY95_12825 PF16338 Domain of unknown function (DUF4968) LPY95_12825 PF17137 Domain of unknown function (DUF5110) LPY95_12825 PF01055 Glycosyl hydrolases family 31 LPY95_12840 PF00942 Cellulose binding domain LPY95_12840 PF03442 Carbohydrate binding domain X2 LPY95_12855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPY95_12855 PF03466 LysR substrate binding domain LPY95_12860 PF01081 KDPG and KHG aldolase LPY95_12865 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LPY95_12865 PF13378 Enolase C-terminal domain-like LPY95_12870 PF08450 SMP-30/Gluconolactonase/LRE-like region LPY95_12875 PF05035 2-keto-3-deoxy-galactonokinase LPY95_12880 PF00037 4Fe-4S binding domain LPY95_12880 PF11953 Domain of unknown function (DUF3470) LPY95_12890 PF00701 Dihydrodipicolinate synthetase family LPY95_12905 PF00578 AhpC/TSA family LPY95_12910 PF02562 PhoH-like protein LPY95_12910 PF13638 PIN domain LPY95_12925 PF08543 Phosphomethylpyrimidine kinase LPY95_12950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPY95_12950 PF03466 LysR substrate binding domain LPY95_12955 PF02678 Pirin LPY95_12955 PF17954 Quercetinase C-terminal cupin domain LPY95_12960 PF13426 PAS domain LPY95_12960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LPY95_12960 PF08447 PAS fold LPY95_12970 PF02599 Global regulator protein family LPY95_12975 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LPY95_12975 PF02272 DHHA1 domain LPY95_12975 PF01411 tRNA synthetases class II (A) LPY95_12980 PF02631 RecX family LPY95_12985 PF00154 recA bacterial DNA recombination protein LPY95_12990 PF00717 Peptidase S24-like LPY95_12990 PF01726 LexA DNA binding domain LPY95_12995 PF03109 ABC1 family LPY95_13000 PF02464 Competence-damaged protein LPY95_13005 PF13167 GTP-binding GTPase N-terminal LPY95_13005 PF01926 50S ribosome-binding GTPase LPY95_13005 PF16360 GTP-binding GTPase Middle Region LPY95_13010 PF17209 Hfq protein LPY95_13020 PF00809 Pterin binding enzyme LPY95_13025 PF00004 ATPase family associated with various cellular activities (AAA) LPY95_13025 PF17862 AAA+ lid domain LPY95_13025 PF06480 FtsH Extracellular LPY95_13025 PF01434 Peptidase family M41 LPY95_13030 PF01728 FtsJ-like methyltransferase LPY95_13035 PF01985 CRS1 / YhbY (CRM) domain LPY95_13040 PF04430 Protein of unknown function (DUF498/DUF598) LPY95_13045 PF01551 Peptidase family M23 LPY95_13045 PF01476 LysM domain LPY95_13050 PF09335 SNARE associated Golgi protein LPY95_13060 PF01975 Survival protein SurE LPY95_13065 PF01713 Smr domain LPY95_13070 PF01142 tRNA pseudouridine synthase D (TruD) LPY95_13075 PF02542 YgbB family LPY95_13080 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LPY95_13085 PF04977 Septum formation initiator LPY95_13090 PF00113 Enolase, C-terminal TIM barrel domain LPY95_13090 PF03952 Enolase, N-terminal domain LPY95_13100 PF00793 DAHP synthetase I family LPY95_13105 PF00117 Glutamine amidotransferase class-I LPY95_13105 PF06418 CTP synthase N-terminus LPY95_13115 PF00986 DNA gyrase B subunit, carboxyl terminus LPY95_13115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_13115 PF01751 Toprim domain LPY95_13115 PF00204 DNA gyrase B LPY95_13130 PF01384 Phosphate transporter family LPY95_13140 PF00571 CBS domain LPY95_13140 PF03471 Transporter associated domain LPY95_13140 PF01595 Cyclin M transmembrane N-terminal domain LPY95_13155 PF00296 Luciferase-like monooxygenase LPY95_13160 PF07690 Major Facilitator Superfamily LPY95_13170 PF00005 ABC transporter LPY95_13205 PF08241 Methyltransferase domain LPY95_13220 PF00535 Glycosyl transferase family 2 LPY95_13225 PF01943 Polysaccharide biosynthesis protein LPY95_13230 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LPY95_13250 PF05523 WxcM-like, C-terminal LPY95_13265 PF00034 Cytochrome c LPY95_13295 PF13406 Transglycosylase SLT domain LPY95_13330 PF08281 Sigma-70, region 4 LPY95_13330 PF04542 Sigma-70 region 2 LPY95_13340 PF00082 Subtilase family LPY95_13345 PF01578 Cytochrome C assembly protein LPY95_13355 PF03100 CcmE LPY95_13360 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LPY95_13360 PF01578 Cytochrome C assembly protein LPY95_13365 PF08534 Redoxin LPY95_13370 PF03918 Cytochrome C biogenesis protein LPY95_13380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_13380 PF13426 PAS domain LPY95_13380 PF00072 Response regulator receiver domain LPY95_13390 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LPY95_13390 PF00672 HAMP domain LPY95_13390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_13390 PF00512 His Kinase A (phospho-acceptor) domain LPY95_13390 PF00072 Response regulator receiver domain LPY95_13390 PF01627 Hpt domain LPY95_13410 PF01494 FAD binding domain LPY95_13415 PF00672 HAMP domain LPY95_13415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LPY95_13415 PF02203 Tar ligand binding domain homologue LPY95_13430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPY95_13430 PF03466 LysR substrate binding domain LPY95_13435 PF02525 Flavodoxin-like fold LPY95_13440 PF02403 Seryl-tRNA synthetase N-terminal domain LPY95_13440 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LPY95_13445 PF03544 Gram-negative bacterial TonB protein C-terminal LPY95_13460 PF01842 ACT domain LPY95_13460 PF00800 Prephenate dehydratase LPY95_13460 PF01817 Chorismate mutase type II LPY95_13465 PF00266 Aminotransferase class-V LPY95_13470 PF00174 Oxidoreductase molybdopterin binding domain LPY95_13475 PF01794 Ferric reductase like transmembrane component LPY95_13500 PF00392 Bacterial regulatory proteins, gntR family LPY95_13500 PF07702 UTRA domain LPY95_13515 PF07969 Amidohydrolase family LPY95_13520 PF00221 Aromatic amino acid lyase LPY95_13530 PF01175 Urocanase Rossmann-like domain LPY95_13530 PF17392 Urocanase C-terminal domain LPY95_13530 PF17391 Urocanase N-terminal domain LPY95_13540 PF13360 PQQ-like domain LPY95_13545 PF00521 DNA gyrase/topoisomerase IV, subunit A LPY95_13545 PF03989 DNA gyrase C-terminal domain, beta-propeller LPY95_13550 PF01008 Initiation factor 2 subunit family LPY95_13560 PF00152 tRNA synthetases class II (D, K and N) LPY95_13565 PF00533 BRCA1 C Terminus (BRCT) domain LPY95_13565 PF01653 NAD-dependent DNA ligase adenylation domain LPY95_13565 PF03120 NAD-dependent DNA ligase OB-fold domain LPY95_13565 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LPY95_13565 PF12826 Helix-hairpin-helix motif LPY95_13570 PF00155 Aminotransferase class I and II LPY95_13585 PF04354 ZipA, C-terminal FtsZ-binding domain LPY95_13590 PF02463 RecF/RecN/SMC N terminal domain LPY95_13595 PF03948 Ribosomal protein L9, C-terminal domain LPY95_13595 PF01281 Ribosomal protein L9, N-terminal domain LPY95_13600 PF01084 Ribosomal protein S18 LPY95_13605 PF01250 Ribosomal protein S6 LPY95_13610 PF01521 Iron-sulphur cluster biosynthesis LPY95_13615 PF00152 tRNA synthetases class II (D, K and N) LPY95_13615 PF01336 OB-fold nucleic acid binding domain LPY95_13635 PF04299 Putative FMN-binding domain LPY95_13660 PF00072 Response regulator receiver domain LPY95_13660 PF00196 Bacterial regulatory proteins, luxR family LPY95_13705 PF00484 Carbonic anhydrase LPY95_13710 PF06052 3-hydroxyanthranilic acid dioxygenase LPY95_13725 PF00266 Aminotransferase class-V LPY95_13730 PF01494 FAD binding domain LPY95_13735 PF08411 Exonuclease C-terminal LPY95_13735 PF00929 Exonuclease LPY95_13760 PF01513 ATP-NAD kinase LPY95_13765 PF10672 S-adenosylmethionine-dependent methyltransferase LPY95_13765 PF02926 THUMP domain LPY95_13765 PF01170 Putative RNA methylase family UPF0020 LPY95_13775 PF16326 ABC transporter C-terminal domain LPY95_13775 PF00005 ABC transporter LPY95_13775 PF12848 ABC transporter LPY95_13805 PF00581 Rhodanese-like domain LPY95_13810 PF00293 NUDIX domain LPY95_13815 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPY95_13815 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LPY95_13820 PF00378 Enoyl-CoA hydratase/isomerase LPY95_13830 PF10576 Iron-sulfur binding domain of endonuclease III LPY95_13830 PF00730 HhH-GPD superfamily base excision DNA repair protein LPY95_13830 PF00633 Helix-hairpin-helix motif LPY95_13835 PF00916 Sulfate permease family LPY95_13835 PF01740 STAS domain LPY95_13840 PF00484 Carbonic anhydrase LPY95_13855 PF12849 PBP superfamily domain LPY95_13860 PF12849 PBP superfamily domain LPY95_13865 PF00528 Binding-protein-dependent transport system inner membrane component LPY95_13870 PF00528 Binding-protein-dependent transport system inner membrane component LPY95_13875 PF00005 ABC transporter LPY95_13880 PF01895 PhoU domain LPY95_13890 PF00929 Exonuclease LPY95_13900 PF05598 Transposase domain (DUF772) LPY95_13910 PF00588 SpoU rRNA Methylase family LPY95_13910 PF08032 RNA 2'-O ribose methyltransferase substrate binding LPY95_13920 PF08206 Ribonuclease B OB domain LPY95_13920 PF00575 S1 RNA binding domain LPY95_13920 PF08461 Ribonuclease R winged-helix domain LPY95_13920 PF00773 RNB domain LPY95_13920 PF17876 Cold shock domain LPY95_13935 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LPY95_13935 PF02770 Acyl-CoA dehydrogenase, middle domain LPY95_13935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LPY95_13940 PF01209 ubiE/COQ5 methyltransferase family LPY95_13945 PF02574 Homocysteine S-methyltransferase LPY95_13945 PF00809 Pterin binding enzyme LPY95_13950 PF02574 Homocysteine S-methyltransferase LPY95_13950 PF00809 Pterin binding enzyme LPY95_13950 PF02607 B12 binding domain LPY95_13950 PF02310 B12 binding domain LPY95_13950 PF02965 Vitamin B12 dependent methionine synthase, activation domain LPY95_13960 PF00294 pfkB family carbohydrate kinase LPY95_13965 PF07690 Major Facilitator Superfamily LPY95_13970 PF00356 Bacterial regulatory proteins, lacI family LPY95_13985 PF04102 SlyX LPY95_13990 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LPY95_13990 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LPY95_13990 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LPY95_13995 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPY95_13995 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LPY95_14000 PF00255 Glutathione peroxidase LPY95_14010 PF00392 Bacterial regulatory proteins, gntR family LPY95_14015 PF00005 ABC transporter LPY95_14040 PF00206 Lyase LPY95_14040 PF10415 Fumarase C C-terminus LPY95_14045 PF00571 CBS domain LPY95_14045 PF01595 Cyclin M transmembrane N-terminal domain LPY95_14045 PF03471 Transporter associated domain LPY95_14055 PF08328 Adenylosuccinate lyase C-terminal LPY95_14055 PF00206 Lyase LPY95_14065 PF08007 Cupin superfamily protein LPY95_14075 PF16078 2-oxoglutarate dehydrogenase N-terminus LPY95_14075 PF00676 Dehydrogenase E1 component LPY95_14075 PF16870 2-oxoglutarate dehydrogenase C-terminal LPY95_14075 PF02779 Transketolase, pyrimidine binding domain LPY95_14080 PF02817 e3 binding domain LPY95_14080 PF00364 Biotin-requiring enzyme LPY95_14080 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LPY95_14085 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPY95_14085 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LPY95_14090 PF03641 Possible lysine decarboxylase LPY95_14095 PF01205 Uncharacterized protein family UPF0029 LPY95_14100 PF00664 ABC transporter transmembrane region LPY95_14100 PF00005 ABC transporter LPY95_14105 PF03466 LysR substrate binding domain LPY95_14105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPY95_14110 PF00005 ABC transporter LPY95_14110 PF03412 Peptidase C39 family LPY95_14110 PF00664 ABC transporter transmembrane region LPY95_14135 PF08543 Phosphomethylpyrimidine kinase LPY95_14140 PF00226 DnaJ domain LPY95_14140 PF01556 DnaJ C terminal domain LPY95_14140 PF00684 DnaJ central domain LPY95_14145 PF00012 Hsp70 protein LPY95_14150 PF01025 GrpE LPY95_14155 PF01628 HrcA protein C terminal domain LPY95_14155 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding LPY95_14160 PF02463 RecF/RecN/SMC N terminal domain LPY95_14165 PF01475 Ferric uptake regulator family LPY95_14170 PF04355 SmpA / OmlA family LPY95_14175 PF03658 RnfH family Ubiquitin LPY95_14180 PF03364 Polyketide cyclase / dehydrase and lipid transport LPY95_14185 PF01668 SmpB protein LPY95_14190 PF00082 Subtilase family LPY95_14225 PF05598 Transposase domain (DUF772) LPY95_14230 PF00664 ABC transporter transmembrane region LPY95_14230 PF00005 ABC transporter LPY95_14230 PF03412 Peptidase C39 family LPY95_14255 PF00990 Diguanylate cyclase, GGDEF domain LPY95_14265 PF00990 Diguanylate cyclase, GGDEF domain LPY95_14270 PF02321 Outer membrane efflux protein LPY95_14275 PF00106 short chain dehydrogenase LPY95_14280 PF00873 AcrB/AcrD/AcrF family LPY95_14285 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPY95_14300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPY95_14300 PF03466 LysR substrate binding domain LPY95_14305 PF00691 OmpA family LPY95_14305 PF05736 OprF membrane domain LPY95_14310 PF00875 DNA photolyase LPY95_14310 PF03441 FAD binding domain of DNA photolyase LPY95_14315 PF03796 DnaB-like helicase C terminal domain LPY95_14315 PF00772 DnaB-like helicase N terminal domain LPY95_14320 PF03358 NADPH-dependent FMN reductase LPY95_14325 PF13537 Glutamine amidotransferase domain LPY95_14325 PF00733 Asparagine synthase LPY95_14335 PF02798 Glutathione S-transferase, N-terminal domain LPY95_14335 PF00043 Glutathione S-transferase, C-terminal domain LPY95_14345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LPY95_14345 PF02770 Acyl-CoA dehydrogenase, middle domain LPY95_14345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LPY95_14360 PF01026 TatD related DNase LPY95_14365 PF00899 ThiF family LPY95_14380 PF00313 'Cold-shock' DNA-binding domain LPY95_14395 PF00484 Carbonic anhydrase LPY95_14410 PF05683 Fumarase C-terminus LPY95_14410 PF05681 Fumarate hydratase (Fumerase) LPY95_14415 PF00005 ABC transporter LPY95_14420 PF00970 Oxidoreductase FAD-binding domain LPY95_14420 PF00175 Oxidoreductase NAD-binding domain LPY95_14425 PF00255 Glutathione peroxidase LPY95_14430 PF01432 Peptidase family M3 LPY95_14435 PF12802 MarR family LPY95_14460 PF00854 POT family LPY95_14470 PF14310 Fibronectin type III-like domain LPY95_14470 PF00933 Glycosyl hydrolase family 3 N terminal domain LPY95_14470 PF01915 Glycosyl hydrolase family 3 C-terminal domain LPY95_14480 PF07690 Major Facilitator Superfamily LPY95_14485 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPY95_14485 PF00529 HlyD membrane-fusion protein of T1SS LPY95_14490 PF02321 Outer membrane efflux protein LPY95_14505 PF03989 DNA gyrase C-terminal domain, beta-propeller LPY95_14505 PF00521 DNA gyrase/topoisomerase IV, subunit A LPY95_14510 PF05724 Thiopurine S-methyltransferase (TPMT) LPY95_14515 PF00210 Ferritin-like domain LPY95_14525 PF07715 TonB-dependent Receptor Plug Domain LPY95_14525 PF00593 TonB dependent receptor LPY95_14535 PF00733 Asparagine synthase LPY95_14535 PF13537 Glutamine amidotransferase domain LPY95_14540 PF01546 Peptidase family M20/M25/M40 LPY95_14540 PF07687 Peptidase dimerisation domain LPY95_14545 PF03960 ArsC family LPY95_14550 PF00132 Bacterial transferase hexapeptide (six repeats) LPY95_14550 PF14602 Hexapeptide repeat of succinyl-transferase LPY95_14550 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LPY95_14560 PF00557 Metallopeptidase family M24 LPY95_14595 PF00318 Ribosomal protein S2 LPY95_14600 PF00889 Elongation factor TS LPY95_14605 PF00990 Diguanylate cyclase, GGDEF domain LPY95_14605 PF00072 Response regulator receiver domain LPY95_14610 PF00696 Amino acid kinase family LPY95_14615 PF01765 Ribosome recycling factor LPY95_14620 PF01255 Putative undecaprenyl diphosphate synthase LPY95_14630 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LPY95_14630 PF13288 DXP reductoisomerase C-terminal domain LPY95_14630 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LPY95_14635 PF17820 PDZ domain LPY95_14635 PF02163 Peptidase family M50 LPY95_14640 PF07244 Surface antigen variable number repeat LPY95_14640 PF01103 Surface antigen LPY95_14650 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LPY95_14650 PF00132 Bacterial transferase hexapeptide (six repeats) LPY95_14655 PF07977 FabA-like domain LPY95_14660 PF00132 Bacterial transferase hexapeptide (six repeats) LPY95_14660 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LPY95_14665 PF02684 Lipid-A-disaccharide synthetase LPY95_14670 PF01351 Ribonuclease HII LPY95_14675 PF07733 Bacterial DNA polymerase III alpha NTPase domain LPY95_14675 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LPY95_14675 PF14579 Helix-hairpin-helix motif LPY95_14675 PF02811 PHP domain LPY95_14675 PF01336 OB-fold nucleic acid binding domain LPY95_14680 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LPY95_14695 PF03653 Uncharacterised protein family (UPF0093) LPY95_14715 PF03551 Transcriptional regulator PadR-like family LPY95_14735 PF02592 Putative vitamin uptake transporter LPY95_14745 PF02574 Homocysteine S-methyltransferase LPY95_14750 PF00324 Amino acid permease LPY95_14755 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LPY95_14760 PF13732 Domain of unknown function (DUF4162) LPY95_14760 PF00005 ABC transporter LPY95_14775 PF09334 tRNA synthetases class I (M) LPY95_14775 PF01588 Putative tRNA binding domain LPY95_14785 PF04060 Putative Fe-S cluster LPY95_14800 PF04542 Sigma-70 region 2 LPY95_14800 PF04545 Sigma-70, region 4 LPY95_14845 PF01042 Endoribonuclease L-PSP LPY95_14855 PF09924 Uncharacterised conserved protein (DUF2156) LPY95_14855 PF03706 Lysylphosphatidylglycerol synthase TM region LPY95_14890 PF07690 Major Facilitator Superfamily LPY95_14900 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LPY95_14905 PF08274 PhnA Zinc-Ribbon LPY95_14905 PF03831 PhnA domain LPY95_14915 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPY95_14935 PF01258 Prokaryotic dksA/traR C4-type zinc finger LPY95_14945 PF07043 Protein of unknown function (DUF1328) LPY95_14950 PF01863 Protein of unknown function DUF45 LPY95_14965 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LPY95_14965 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LPY95_14970 PF00082 Subtilase family LPY95_14970 PF12951 Passenger-associated-transport-repeat LPY95_14970 PF03797 Autotransporter beta-domain LPY95_14975 PF00108 Thiolase, N-terminal domain LPY95_14975 PF02803 Thiolase, C-terminal domain LPY95_14990 PF00072 Response regulator receiver domain LPY95_14990 PF00990 Diguanylate cyclase, GGDEF domain LPY95_15005 PF04675 DNA ligase N terminus LPY95_15005 PF01068 ATP dependent DNA ligase domain LPY95_15005 PF04679 ATP dependent DNA ligase C terminal region LPY95_15015 PF01068 ATP dependent DNA ligase domain LPY95_15015 PF04679 ATP dependent DNA ligase C terminal region LPY95_15015 PF04675 DNA ligase N terminus LPY95_15020 PF00271 Helicase conserved C-terminal domain LPY95_15020 PF00270 DEAD/DEAH box helicase LPY95_15020 PF08494 DEAD/H associated LPY95_15030 PF01494 FAD binding domain LPY95_15035 PF00313 'Cold-shock' DNA-binding domain LPY95_15040 PF01048 Phosphorylase superfamily LPY95_15045 PF00156 Phosphoribosyl transferase domain LPY95_15050 PF00933 Glycosyl hydrolase family 3 N terminal domain LPY95_15055 PF04244 Deoxyribodipyrimidine photo-lyase-related protein LPY95_15060 PF01593 Flavin containing amine oxidoreductase LPY95_15065 PF01323 DSBA-like thioredoxin domain LPY95_15075 PF05958 tRNA (Uracil-5-)-methyltransferase LPY95_15085 PF11967 Recombination protein O N terminal LPY95_15085 PF02565 Recombination protein O C terminal LPY95_15090 PF07650 KH domain LPY95_15090 PF01926 50S ribosome-binding GTPase LPY95_15095 PF00035 Double-stranded RNA binding motif LPY95_15095 PF14622 Ribonuclease-III-like LPY95_15105 PF10502 Signal peptidase, peptidase S26 LPY95_15110 PF03144 Elongation factor Tu domain 2 LPY95_15110 PF00009 Elongation factor Tu GTP binding domain LPY95_15110 PF00679 Elongation factor G C-terminus LPY95_15110 PF06421 GTP-binding protein LepA C-terminus LPY95_15115 PF13180 PDZ domain LPY95_15125 PF08281 Sigma-70, region 4 LPY95_15125 PF04542 Sigma-70 region 2 LPY95_15130 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LPY95_15130 PF00378 Enoyl-CoA hydratase/isomerase LPY95_15130 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LPY95_15135 PF01545 Cation efflux family LPY95_15140 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LPY95_15140 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LPY95_15145 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LPY95_15145 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LPY95_15145 PF00378 Enoyl-CoA hydratase/isomerase LPY95_15150 PF00378 Enoyl-CoA hydratase/isomerase LPY95_15155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LPY95_15155 PF02770 Acyl-CoA dehydrogenase, middle domain LPY95_15155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LPY95_15160 PF00171 Aldehyde dehydrogenase family LPY95_15175 PF07745 Glycosyl hydrolase family 53 LPY95_15180 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 LPY95_15180 PF16355 Domain of unknown function (DUF4982) LPY95_15180 PF00703 Glycosyl hydrolases family 2 LPY95_15180 PF02837 Glycosyl hydrolases family 2, sugar binding domain LPY95_15180 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LPY95_15205 PF05598 Transposase domain (DUF772) LPY95_15235 PF03527 RHS protein LPY95_15235 PF05593 RHS Repeat LPY95_15245 PF03527 RHS protein LPY95_15245 PF05593 RHS Repeat LPY95_15255 PF00488 MutS domain V LPY95_15255 PF05190 MutS family domain IV LPY95_15255 PF05192 MutS domain III LPY95_15255 PF05188 MutS domain II LPY95_15255 PF01624 MutS domain I LPY95_15265 PF00141 Peroxidase LPY95_15270 PF01479 S4 domain LPY95_15285 PF01554 MatE LPY95_15290 PF01245 Ribosomal protein L19 LPY95_15295 PF01746 tRNA (Guanine-1)-methyltransferase LPY95_15300 PF05239 PRC-barrel domain LPY95_15300 PF01782 RimM N-terminal domain LPY95_15305 PF00886 Ribosomal protein S16 LPY95_15310 PF01063 Amino-transferase class IV LPY95_15315 PF03060 Nitronate monooxygenase LPY95_15320 PF00448 SRP54-type protein, GTPase domain LPY95_15320 PF02881 SRP54-type protein, helical bundle domain LPY95_15320 PF02978 Signal peptide binding domain LPY95_15325 PF01578 Cytochrome C assembly protein LPY95_15335 PF01263 Aldose 1-epimerase LPY95_15340 PF06964 Alpha-L-arabinofuranosidase C-terminal domain LPY95_15355 PF00072 Response regulator receiver domain LPY95_15360 PF13426 PAS domain LPY95_15360 PF00072 Response regulator receiver domain LPY95_15360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_15365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_15365 PF00512 His Kinase A (phospho-acceptor) domain LPY95_15365 PF01627 Hpt domain LPY95_15365 PF00072 Response regulator receiver domain LPY95_15365 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LPY95_15365 PF00672 HAMP domain LPY95_15370 PF03705 CheR methyltransferase, all-alpha domain LPY95_15370 PF01739 CheR methyltransferase, SAM binding domain LPY95_15375 PF01339 CheB methylesterase LPY95_15380 PF00072 Response regulator receiver domain LPY95_15380 PF00990 Diguanylate cyclase, GGDEF domain LPY95_15385 PF07237 Protein of unknown function (DUF1428) LPY95_15390 PF00085 Thioredoxin LPY95_15395 PF07715 TonB-dependent Receptor Plug Domain LPY95_15395 PF00593 TonB dependent receptor LPY95_15400 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain LPY95_15400 PF04616 Glycosyl hydrolases family 43 LPY95_15405 PF13188 PAS domain LPY95_15405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_15405 PF00512 His Kinase A (phospho-acceptor) domain LPY95_15405 PF00072 Response regulator receiver domain LPY95_15405 PF08448 PAS fold LPY95_15410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_15410 PF00512 His Kinase A (phospho-acceptor) domain LPY95_15420 PF13581 Histidine kinase-like ATPase domain LPY95_15425 PF01740 STAS domain LPY95_15430 PF08678 Rsbr N terminal LPY95_15430 PF01740 STAS domain LPY95_15440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_15440 PF00183 Hsp90 protein LPY95_15445 PF12833 Helix-turn-helix domain LPY95_15455 PF05656 Protein of unknown function (DUF805) LPY95_15460 PF18073 Rubredoxin metal binding domain LPY95_15470 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LPY95_15475 PF00510 Cytochrome c oxidase subunit III LPY95_15480 PF00115 Cytochrome C and Quinol oxidase polypeptide I LPY95_15485 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LPY95_15485 PF06481 COX Aromatic Rich Motif LPY95_15490 PF00589 Phage integrase family LPY95_15515 PF13087 AAA domain LPY95_15515 PF13091 PLD-like domain LPY95_15520 PF03389 MobA/MobL family LPY95_15610 PF02401 LytB protein LPY95_15615 PF01252 Signal peptidase (SPase) II LPY95_15620 PF00133 tRNA synthetases class I (I, L, M and V) LPY95_15620 PF06827 Zinc finger found in FPG and IleRS LPY95_15620 PF08264 Anticodon-binding domain of tRNA LPY95_15625 PF01687 Riboflavin kinase LPY95_15625 PF06574 FAD synthetase LPY95_15630 PF03023 Lipid II flippase MurJ LPY95_15635 PF01649 Ribosomal protein S20 LPY95_15640 PF01018 GTP1/OBG LPY95_15640 PF01926 50S ribosome-binding GTPase LPY95_15645 PF01016 Ribosomal L27 protein LPY95_15650 PF00829 Ribosomal prokaryotic L21 protein LPY95_15655 PF00005 ABC transporter LPY95_15655 PF17755 UvrA DNA-binding domain LPY95_15655 PF17760 UvrA interaction domain LPY95_15670 PF00378 Enoyl-CoA hydratase/isomerase LPY95_15695 PF04377 Arginine-tRNA-protein transferase, C terminus LPY95_15695 PF04376 Arginine-tRNA-protein transferase, N terminus LPY95_15705 PF02222 ATP-grasp domain LPY95_15735 PF00730 HhH-GPD superfamily base excision DNA repair protein LPY95_15750 PF00196 Bacterial regulatory proteins, luxR family LPY95_15750 PF00072 Response regulator receiver domain LPY95_15755 PF07730 Histidine kinase LPY95_15765 PF03775 Septum formation inhibitor MinC, C-terminal domain LPY95_15765 PF05209 Septum formation inhibitor MinC, N-terminal domain LPY95_15770 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LPY95_15775 PF03776 Septum formation topological specificity factor MinE LPY95_15785 PF08521 Two-component sensor kinase N-terminal LPY95_15785 PF00512 His Kinase A (phospho-acceptor) domain LPY95_15785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_15790 PF00486 Transcriptional regulatory protein, C terminal LPY95_15790 PF00072 Response regulator receiver domain LPY95_15805 PF00884 Sulfatase LPY95_15805 PF08019 Phosphoethanolamine transferase EptA/EptB LPY95_15820 PF07690 Major Facilitator Superfamily LPY95_15825 PF02347 Glycine cleavage system P-protein LPY95_15830 PF00135 Carboxylesterase family LPY95_15835 PF00248 Aldo/keto reductase family LPY95_15840 PF18011 C-terminal domain found in long catalases LPY95_15840 PF06628 Catalase-related immune-responsive LPY95_15840 PF00199 Catalase LPY95_15870 PF02311 AraC-like ligand binding domain LPY95_15870 PF12833 Helix-turn-helix domain LPY95_15895 PF00326 Prolyl oligopeptidase family LPY95_15895 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region LPY95_15895 PF07676 WD40-like Beta Propeller Repeat LPY95_15910 PF03169 OPT oligopeptide transporter protein LPY95_15920 PF00326 Prolyl oligopeptidase family LPY95_15925 PF14579 Helix-hairpin-helix motif LPY95_15925 PF02811 PHP domain LPY95_15925 PF07733 Bacterial DNA polymerase III alpha NTPase domain LPY95_15925 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LPY95_15940 PF00717 Peptidase S24-like LPY95_15940 PF01726 LexA DNA binding domain LPY95_15975 PF01799 [2Fe-2S] binding domain LPY95_15975 PF00111 2Fe-2S iron-sulfur cluster binding domain LPY95_15980 PF03450 CO dehydrogenase flavoprotein C-terminal domain LPY95_15980 PF00941 FAD binding domain in molybdopterin dehydrogenase LPY95_15985 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LPY95_15985 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LPY95_15990 PF17755 UvrA DNA-binding domain LPY95_16010 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPY95_16020 PF00106 short chain dehydrogenase LPY95_16025 PF07971 Glycosyl hydrolase family 92 LPY95_16025 PF17678 Glycosyl hydrolase family 92 N-terminal domain LPY95_16045 PF01256 Carbohydrate kinase LPY95_16050 PF00300 Histidine phosphatase superfamily (branch 1) LPY95_16050 PF13456 Reverse transcriptase-like LPY95_16055 PF13977 BetI-type transcriptional repressor, C-terminal LPY95_16055 PF00440 Bacterial regulatory proteins, tetR family LPY95_16070 PF01555 DNA methylase LPY95_16085 PF00271 Helicase conserved C-terminal domain LPY95_16085 PF00176 SNF2 family N-terminal domain LPY95_16105 PF01695 IstB-like ATP binding protein LPY95_16110 PF00665 Integrase core domain LPY95_16110 PF02796 Helix-turn-helix domain of resolvase LPY95_16125 PF00440 Bacterial regulatory proteins, tetR family LPY95_16140 PF11838 ERAP1-like C-terminal domain LPY95_16140 PF01433 Peptidase family M1 domain LPY95_16145 PF00709 Adenylosuccinate synthetase LPY95_16155 PF01145 SPFH domain / Band 7 family LPY95_16160 PF01145 SPFH domain / Band 7 family LPY95_16160 PF12221 Bacterial membrane protein N terminal LPY95_16165 PF00072 Response regulator receiver domain LPY95_16170 PF00226 DnaJ domain LPY95_16170 PF01556 DnaJ C terminal domain LPY95_16180 PF08534 Redoxin LPY95_16190 PF00912 Transglycosylase LPY95_16190 PF00905 Penicillin binding protein transpeptidase domain LPY95_16190 PF06832 Penicillin-Binding Protein C-terminus Family LPY95_16205 PF07703 Alpha-2-macroglobulin bait region domain LPY95_16205 PF01835 MG2 domain LPY95_16205 PF17962 Bacterial macroglobulin domain 6 LPY95_16205 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain LPY95_16205 PF11974 Bacterial alpha-2-macroglobulin MG3 domain LPY95_16205 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain LPY95_16205 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain LPY95_16205 PF00207 Alpha-2-macroglobulin family LPY95_16215 PF00593 TonB dependent receptor LPY95_16215 PF07715 TonB-dependent Receptor Plug Domain LPY95_16220 PF04303 PrpF protein LPY95_16235 PF00330 Aconitase family (aconitate hydratase) LPY95_16235 PF00694 Aconitase C-terminal domain LPY95_16240 PF00285 Citrate synthase, C-terminal domain LPY95_16250 PF02954 Bacterial regulatory protein, Fis family LPY95_16250 PF06506 Propionate catabolism activator LPY95_16250 PF00158 Sigma-54 interaction domain LPY95_16270 PF09115 DNA polymerase III, delta subunit, C terminal LPY95_16275 PF02618 YceG-like family LPY95_16280 PF00425 chorismate binding enzyme LPY95_16280 PF04715 Anthranilate synthase component I, N terminal region LPY95_16285 PF00109 Beta-ketoacyl synthase, N-terminal domain LPY95_16285 PF02801 Beta-ketoacyl synthase, C-terminal domain LPY95_16290 PF00550 Phosphopantetheine attachment site LPY95_16300 PF00698 Acyl transferase domain LPY95_16310 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LPY95_16310 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LPY95_16315 PF01783 Ribosomal L32p protein family LPY95_16320 PF02620 Large ribosomal RNA subunit accumulation protein YceD LPY95_16325 PF02545 Maf-like protein LPY95_16345 PF07726 ATPase family associated with various cellular activities (AAA) LPY95_16345 PF17863 AAA lid domain LPY95_16355 PF13559 Domain of unknown function (DUF4129) LPY95_16355 PF11992 Domain of unknown function (DUF3488) LPY95_16355 PF01841 Transglutaminase-like superfamily LPY95_16365 PF01230 HIT domain LPY95_16370 PF02132 RecR protein LPY95_16370 PF13662 Toprim domain LPY95_16375 PF02575 YbaB/EbfC DNA-binding family LPY95_16380 PF12170 DNA polymerase III tau subunit V interacting with alpha LPY95_16380 PF12169 DNA polymerase III subunits gamma and tau domain III LPY95_16405 PF07669 Eco57I restriction-modification methylase LPY95_16405 PF12950 TaqI-like C-terminal specificity domain LPY95_16420 PF01695 IstB-like ATP binding protein LPY95_16425 PF00665 Integrase core domain LPY95_16425 PF02796 Helix-turn-helix domain of resolvase LPY95_16505 PF02391 MoaE protein LPY95_16510 PF02597 ThiS family LPY95_16515 PF01967 MoaC family LPY95_16525 PF04055 Radical SAM superfamily LPY95_16525 PF06463 Molybdenum Cofactor Synthesis C LPY95_16530 PF12706 Beta-lactamase superfamily domain LPY95_16530 PF00753 Metallo-beta-lactamase superfamily LPY95_16540 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LPY95_16560 PF00929 Exonuclease LPY95_16565 PF00075 RNase H LPY95_16575 PF16123 Hydroxyacylglutathione hydrolase C-terminus LPY95_16575 PF00753 Metallo-beta-lactamase superfamily LPY95_16580 PF05257 CHAP domain LPY95_16580 PF01476 LysM domain LPY95_16605 PF00216 Bacterial DNA-binding protein LPY95_16610 PF00004 ATPase family associated with various cellular activities (AAA) LPY95_16610 PF05362 Lon protease (S16) C-terminal proteolytic domain LPY95_16610 PF02190 ATP-dependent protease La (LON) substrate-binding domain LPY95_16615 PF10431 C-terminal, D2-small domain, of ClpB protein LPY95_16615 PF07724 AAA domain (Cdc48 subfamily) LPY95_16615 PF06689 ClpX C4-type zinc finger LPY95_16620 PF00574 Clp protease LPY95_16625 PF05697 Bacterial trigger factor protein (TF) LPY95_16625 PF05698 Bacterial trigger factor protein (TF) C-terminus LPY95_16635 PF00989 PAS fold LPY95_16635 PF00512 His Kinase A (phospho-acceptor) domain LPY95_16635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_16670 PF00180 Isocitrate/isopropylmalate dehydrogenase LPY95_16680 PF00462 Glutaredoxin LPY95_16685 PF01435 Peptidase family M48 LPY95_16685 PF13181 Tetratricopeptide repeat LPY95_16690 PF00072 Response regulator receiver domain LPY95_16690 PF00486 Transcriptional regulatory protein, C terminal LPY95_16695 PF11808 Phosphate regulon sensor protein PhoR LPY95_16695 PF00512 His Kinase A (phospho-acceptor) domain LPY95_16695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_16695 PF00989 PAS fold LPY95_16700 PF02503 Polyphosphate kinase middle domain LPY95_16700 PF13090 Polyphosphate kinase C-terminal domain 2 LPY95_16700 PF17941 Polyphosphate kinase C-terminal domain 1 LPY95_16700 PF13089 Polyphosphate kinase N-terminal domain LPY95_16705 PF02541 Ppx/GppA phosphatase family LPY95_16710 PF13439 Glycosyltransferase Family 4 LPY95_16710 PF00534 Glycosyl transferases group 1 LPY95_16715 PF01569 PAP2 superfamily LPY95_16720 PF00149 Calcineurin-like phosphoesterase LPY95_16750 PF00156 Phosphoribosyl transferase domain LPY95_16765 PF02875 Mur ligase family, glutamate ligase domain LPY95_16765 PF08245 Mur ligase middle domain LPY95_16775 PF00300 Histidine phosphatase superfamily (branch 1) LPY95_16780 PF10459 Peptidase S46 LPY95_16790 PF05506 Domain of unknown function (DUF756) LPY95_16790 PF04185 Phosphoesterase family LPY95_16805 PF08240 Alcohol dehydrogenase GroES-like domain LPY95_16805 PF00107 Zinc-binding dehydrogenase LPY95_16815 PF17850 CysA C-terminal regulatory domain LPY95_16815 PF12857 TOBE-like domain LPY95_16815 PF00005 ABC transporter LPY95_16820 PF00528 Binding-protein-dependent transport system inner membrane component LPY95_16825 PF00528 Binding-protein-dependent transport system inner membrane component LPY95_16835 PF00155 Aminotransferase class I and II LPY95_16845 PF00849 RNA pseudouridylate synthase LPY95_16855 PF05736 OprF membrane domain LPY95_16855 PF00691 OmpA family LPY95_16860 PF08240 Alcohol dehydrogenase GroES-like domain LPY95_16860 PF00107 Zinc-binding dehydrogenase LPY95_16865 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LPY95_16865 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPY95_16875 PF00043 Glutathione S-transferase, C-terminal domain LPY95_16875 PF02798 Glutathione S-transferase, N-terminal domain LPY95_16880 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LPY95_16880 PF00056 lactate/malate dehydrogenase, NAD binding domain LPY95_16885 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LPY95_16890 PF00679 Elongation factor G C-terminus LPY95_16890 PF00009 Elongation factor Tu GTP binding domain LPY95_16890 PF03144 Elongation factor Tu domain 2 LPY95_16910 PF01474 Class-II DAHP synthetase family LPY95_16925 PF02600 Disulfide bond formation protein DsbB LPY95_16930 PF01196 Ribosomal protein L17 LPY95_16935 PF01000 RNA polymerase Rpb3/RpoA insert domain LPY95_16935 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LPY95_16935 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LPY95_16940 PF01479 S4 domain LPY95_16940 PF00163 Ribosomal protein S4/S9 N-terminal domain LPY95_16945 PF00411 Ribosomal protein S11 LPY95_16950 PF00416 Ribosomal protein S13/S18 LPY95_16955 PF00344 SecY translocase LPY95_16960 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LPY95_16965 PF00327 Ribosomal protein L30p/L7e LPY95_16970 PF00333 Ribosomal protein S5, N-terminal domain LPY95_16970 PF03719 Ribosomal protein S5, C-terminal domain LPY95_16975 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LPY95_16980 PF00347 Ribosomal protein L6 LPY95_16985 PF00410 Ribosomal protein S8 LPY95_16990 PF00253 Ribosomal protein S14p/S29e LPY95_16995 PF00281 Ribosomal protein L5 LPY95_16995 PF00673 ribosomal L5P family C-terminus LPY95_17000 PF00467 KOW motif LPY95_17000 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LPY95_17005 PF00238 Ribosomal protein L14p/L23e LPY95_17010 PF00366 Ribosomal protein S17 LPY95_17015 PF00831 Ribosomal L29 protein LPY95_17020 PF00252 Ribosomal protein L16p/L10e LPY95_17025 PF07650 KH domain LPY95_17025 PF00189 Ribosomal protein S3, C-terminal domain LPY95_17030 PF00237 Ribosomal protein L22p/L17e LPY95_17035 PF00203 Ribosomal protein S19 LPY95_17040 PF00181 Ribosomal Proteins L2, RNA binding domain LPY95_17040 PF03947 Ribosomal Proteins L2, C-terminal domain LPY95_17045 PF00276 Ribosomal protein L23 LPY95_17050 PF00573 Ribosomal protein L4/L1 family LPY95_17055 PF00297 Ribosomal protein L3 LPY95_17060 PF00338 Ribosomal protein S10p/S20e LPY95_17065 PF00009 Elongation factor Tu GTP binding domain LPY95_17065 PF03143 Elongation factor Tu C-terminal domain LPY95_17065 PF03144 Elongation factor Tu domain 2 LPY95_17070 PF00679 Elongation factor G C-terminus LPY95_17070 PF03764 Elongation factor G, domain IV LPY95_17070 PF00009 Elongation factor Tu GTP binding domain LPY95_17070 PF03144 Elongation factor Tu domain 2 LPY95_17070 PF14492 Elongation Factor G, domain II LPY95_17075 PF00177 Ribosomal protein S7p/S5e LPY95_17080 PF00164 Ribosomal protein S12/S23 LPY95_17085 PF05000 RNA polymerase Rpb1, domain 4 LPY95_17085 PF04997 RNA polymerase Rpb1, domain 1 LPY95_17085 PF00623 RNA polymerase Rpb1, domain 2 LPY95_17085 PF04983 RNA polymerase Rpb1, domain 3 LPY95_17085 PF04998 RNA polymerase Rpb1, domain 5 LPY95_17090 PF04563 RNA polymerase beta subunit LPY95_17090 PF04561 RNA polymerase Rpb2, domain 2 LPY95_17090 PF10385 RNA polymerase beta subunit external 1 domain LPY95_17090 PF04565 RNA polymerase Rpb2, domain 3 LPY95_17090 PF04560 RNA polymerase Rpb2, domain 7 LPY95_17090 PF00562 RNA polymerase Rpb2, domain 6 LPY95_17095 PF00542 Ribosomal protein L7/L12 C-terminal domain LPY95_17095 PF16320 Ribosomal protein L7/L12 dimerisation domain LPY95_17100 PF00466 Ribosomal protein L10 LPY95_17105 PF00687 Ribosomal protein L1p/L10e family LPY95_17110 PF00298 Ribosomal protein L11, RNA binding domain LPY95_17110 PF03946 Ribosomal protein L11, N-terminal domain LPY95_17115 PF02357 Transcription termination factor nusG LPY95_17115 PF00467 KOW motif LPY95_17120 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LPY95_17130 PF00009 Elongation factor Tu GTP binding domain LPY95_17130 PF03144 Elongation factor Tu domain 2 LPY95_17130 PF03143 Elongation factor Tu C-terminal domain LPY95_17150 PF01926 50S ribosome-binding GTPase LPY95_17150 PF06071 Protein of unknown function (DUF933) LPY95_17155 PF01195 Peptidyl-tRNA hydrolase LPY95_17160 PF14693 Ribosomal protein TL5, C-terminal domain LPY95_17160 PF01386 Ribosomal L25p family LPY95_17165 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LPY95_17165 PF14572 Phosphoribosyl synthetase-associated domain LPY95_17175 PF00288 GHMP kinases N terminal domain LPY95_17175 PF08544 GHMP kinases C terminal LPY95_17180 PF03550 Outer membrane lipoprotein LolB LPY95_17190 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LPY95_17190 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LPY95_17190 PF01488 Shikimate / quinate 5-dehydrogenase LPY95_17195 PF03462 PCRF domain LPY95_17195 PF00472 RF-1 domain LPY95_17205 PF00994 Probable molybdopterin binding domain LPY95_17210 PF03976 Polyphosphate kinase 2 (PPK2) LPY95_17220 PF00708 Acylphosphatase LPY95_17225 PF08534 Redoxin LPY95_17230 PF03631 Virulence factor BrkB LPY95_17235 PF03358 NADPH-dependent FMN reductase LPY95_17245 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain LPY95_17245 PF17189 Glycosyl hydrolase family 30 beta sandwich domain LPY95_17255 PF04073 Aminoacyl-tRNA editing domain LPY95_17260 PF00082 Subtilase family LPY95_17260 PF04151 Bacterial pre-peptidase C-terminal domain LPY95_17265 PF00082 Subtilase family LPY95_17265 PF04151 Bacterial pre-peptidase C-terminal domain LPY95_17275 PF01063 Amino-transferase class IV LPY95_17290 PF02233 NAD(P) transhydrogenase beta subunit LPY95_17295 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LPY95_17315 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LPY95_17315 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LPY95_17315 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LPY95_17345 PF01367 5'-3' exonuclease, C-terminal SAM fold LPY95_17345 PF00476 DNA polymerase family A LPY95_17345 PF01612 3'-5' exonuclease LPY95_17345 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LPY95_17350 PF00293 NUDIX domain LPY95_17360 PF00561 alpha/beta hydrolase fold LPY95_17365 PF05175 Methyltransferase small domain LPY95_17365 PF17827 PrmC N-terminal domain LPY95_17370 PF00578 AhpC/TSA family LPY95_17370 PF10417 C-terminal domain of 1-Cys peroxiredoxin LPY95_17375 PF13192 Thioredoxin domain LPY95_17375 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPY95_17380 PF03466 LysR substrate binding domain LPY95_17380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPY95_17385 PF14760 Rnk N-terminus LPY95_17385 PF01272 Transcription elongation factor, GreA/GreB, C-term LPY95_17390 PF00923 Transaldolase/Fructose-6-phosphate aldolase LPY95_17400 PF01625 Peptide methionine sulfoxide reductase LPY95_17410 PF00196 Bacterial regulatory proteins, luxR family LPY95_17410 PF00072 Response regulator receiver domain LPY95_17415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_17415 PF00512 His Kinase A (phospho-acceptor) domain LPY95_17415 PF01627 Hpt domain LPY95_17415 PF00072 Response regulator receiver domain LPY95_17415 PF00672 HAMP domain LPY95_17415 PF17149 Periplasmic sensor domain found in signal transduction proteins LPY95_17420 PF00072 Response regulator receiver domain LPY95_17420 PF00990 Diguanylate cyclase, GGDEF domain LPY95_17435 PF00749 tRNA synthetases class I (E and Q), catalytic domain LPY95_17435 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LPY95_17445 PF00892 EamA-like transporter family LPY95_17475 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LPY95_17475 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LPY95_17480 PF08450 SMP-30/Gluconolactonase/LRE-like region LPY95_17500 PF00378 Enoyl-CoA hydratase/isomerase LPY95_17505 PF00171 Aldehyde dehydrogenase family LPY95_17510 PF13193 AMP-binding enzyme C-terminal domain LPY95_17510 PF00501 AMP-binding enzyme LPY95_17515 PF03466 LysR substrate binding domain LPY95_17515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPY95_17520 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LPY95_17520 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit LPY95_17525 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LPY95_17530 PF00392 Bacterial regulatory proteins, gntR family LPY95_17530 PF07729 FCD domain LPY95_17550 PF01494 FAD binding domain LPY95_17555 PF01494 FAD binding domain LPY95_17570 PF01923 Cobalamin adenosyltransferase LPY95_17575 PF00850 Histone deacetylase domain LPY95_17590 PF04453 LPS transport system D LPY95_17590 PF03968 OstA-like protein LPY95_17595 PF00639 PPIC-type PPIASE domain LPY95_17595 PF09312 SurA N-terminal domain LPY95_17600 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LPY95_17605 PF00398 Ribosomal RNA adenine dimethylase LPY95_17610 PF04379 ApaG domain LPY95_17615 PF00149 Calcineurin-like phosphoesterase LPY95_17620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LPY95_17620 PF00005 ABC transporter LPY95_17625 PF00528 Binding-protein-dependent transport system inner membrane component LPY95_17625 PF12911 N-terminal TM domain of oligopeptide transport permease C LPY95_17630 PF00528 Binding-protein-dependent transport system inner membrane component LPY95_17635 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LPY95_17640 PF00296 Luciferase-like monooxygenase LPY95_17665 PF03358 NADPH-dependent FMN reductase LPY95_17670 PF00296 Luciferase-like monooxygenase LPY95_17680 PF00528 Binding-protein-dependent transport system inner membrane component LPY95_17685 PF00005 ABC transporter LPY95_17690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LPY95_17690 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LPY95_17695 PF00158 Sigma-54 interaction domain LPY95_17700 PF00186 Dihydrofolate reductase LPY95_17710 PF00303 Thymidylate synthase LPY95_17715 PF01790 Prolipoprotein diacylglyceryl transferase LPY95_17735 PF01219 Prokaryotic diacylglycerol kinase LPY95_17745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_17745 PF08521 Two-component sensor kinase N-terminal LPY95_17745 PF00512 His Kinase A (phospho-acceptor) domain LPY95_17750 PF00486 Transcriptional regulatory protein, C terminal LPY95_17750 PF00072 Response regulator receiver domain LPY95_17755 PF13472 GDSL-like Lipase/Acylhydrolase family LPY95_17760 PF00005 ABC transporter LPY95_17770 PF02668 Taurine catabolism dioxygenase TauD, TfdA family LPY95_17780 PF00005 ABC transporter LPY95_17785 PF00528 Binding-protein-dependent transport system inner membrane component LPY95_17805 PF07715 TonB-dependent Receptor Plug Domain LPY95_17805 PF00593 TonB dependent receptor LPY95_17820 PF01773 Na+ dependent nucleoside transporter N-terminus LPY95_17820 PF07670 Nucleoside recognition LPY95_17820 PF07662 Na+ dependent nucleoside transporter C-terminus LPY95_17825 PF00294 pfkB family carbohydrate kinase LPY95_17835 PF05598 Transposase domain (DUF772) LPY95_17845 PF01207 Dihydrouridine synthase (Dus) LPY95_17850 PF13649 Methyltransferase domain LPY95_17865 PF00328 Histidine phosphatase superfamily (branch 2) LPY95_17900 PF00311 Phosphoenolpyruvate carboxylase LPY95_17910 PF05221 S-adenosyl-L-homocysteine hydrolase LPY95_17910 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LPY95_17915 PF13649 Methyltransferase domain LPY95_17940 PF00128 Alpha amylase, catalytic domain LPY95_17945 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LPY95_17960 PF00082 Subtilase family LPY95_17960 PF09286 Pro-kumamolisin, activation domain LPY95_17965 PF00550 Phosphopantetheine attachment site LPY95_17965 PF08240 Alcohol dehydrogenase GroES-like domain LPY95_17965 PF08659 KR domain LPY95_17965 PF00107 Zinc-binding dehydrogenase LPY95_17965 PF00698 Acyl transferase domain LPY95_17965 PF14765 Polyketide synthase dehydratase LPY95_17965 PF02801 Beta-ketoacyl synthase, C-terminal domain LPY95_17965 PF00109 Beta-ketoacyl synthase, N-terminal domain LPY95_17965 PF16197 Ketoacyl-synthetase C-terminal extension LPY95_17975 PF02219 Methylenetetrahydrofolate reductase LPY95_17985 PF00293 NUDIX domain LPY95_17990 PF07516 SecA Wing and Scaffold domain LPY95_17990 PF07517 SecA DEAD-like domain LPY95_17990 PF01043 SecA preprotein cross-linking domain LPY95_17990 PF02810 SEC-C motif LPY95_17995 PF01551 Peptidase family M23 LPY95_17995 PF10145 Phage-related minor tail protein LPY95_17995 PF01464 Transglycosylase SLT domain LPY95_18005 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LPY95_18010 PF12327 FtsZ family, C-terminal domain LPY95_18010 PF00091 Tubulin/FtsZ family, GTPase domain LPY95_18015 PF02491 SHS2 domain inserted in FTSA LPY95_18020 PF03799 Cell division protein FtsQ LPY95_18020 PF08478 POTRA domain, FtsQ-type LPY95_18025 PF07478 D-ala D-ala ligase C-terminus LPY95_18025 PF01820 D-ala D-ala ligase N-terminus LPY95_18030 PF01225 Mur ligase family, catalytic domain LPY95_18030 PF08245 Mur ligase middle domain LPY95_18030 PF02875 Mur ligase family, glutamate ligase domain LPY95_18035 PF04101 Glycosyltransferase family 28 C-terminal domain LPY95_18035 PF03033 Glycosyltransferase family 28 N-terminal domain LPY95_18040 PF01098 Cell cycle protein LPY95_18045 PF00953 Glycosyl transferase family 4 LPY95_18050 PF01225 Mur ligase family, catalytic domain LPY95_18050 PF02875 Mur ligase family, glutamate ligase domain LPY95_18050 PF08245 Mur ligase middle domain LPY95_18055 PF01225 Mur ligase family, catalytic domain LPY95_18055 PF02875 Mur ligase family, glutamate ligase domain LPY95_18055 PF08245 Mur ligase middle domain LPY95_18060 PF03717 Penicillin-binding Protein dimerisation domain LPY95_18060 PF00905 Penicillin binding protein transpeptidase domain LPY95_18065 PF04999 Cell division protein FtsL LPY95_18070 PF01795 MraW methylase family LPY95_18075 PF02381 MraZ protein, putative antitoxin-like LPY95_18105 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LPY95_18115 PF02021 Uncharacterised protein family UPF0102 LPY95_18120 PF04307 LexA-binding, inner membrane-associated putative hydrolase LPY95_18125 PF02913 FAD linked oxidases, C-terminal domain LPY95_18125 PF01565 FAD binding domain LPY95_18135 PF00072 Response regulator receiver domain LPY95_18135 PF00486 Transcriptional regulatory protein, C terminal LPY95_18155 PF02669 K+-transporting ATPase, c chain LPY95_18165 PF03814 Potassium-transporting ATPase A subunit LPY95_18185 PF00586 AIR synthase related protein, N-terminal domain LPY95_18185 PF02769 AIR synthase related protein, C-terminal domain LPY95_18190 PF01029 NusB family LPY95_18195 PF00885 6,7-dimethyl-8-ribityllumazine synthase LPY95_18200 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LPY95_18200 PF00925 GTP cyclohydrolase II LPY95_18205 PF00677 Lumazine binding domain LPY95_18220 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LPY95_18220 PF01872 RibD C-terminal domain LPY95_18230 PF03477 ATP cone domain LPY95_18235 PF00464 Serine hydroxymethyltransferase LPY95_18245 PF12848 ABC transporter LPY95_18245 PF00005 ABC transporter LPY95_18255 PF00892 EamA-like transporter family LPY95_18260 PF02567 Phenazine biosynthesis-like protein LPY95_18265 PF00155 Aminotransferase class I and II LPY95_18265 PF00392 Bacterial regulatory proteins, gntR family LPY95_18275 PF00756 Putative esterase LPY95_18280 PF04828 Glutathione-dependent formaldehyde-activating enzyme LPY95_18285 PF08240 Alcohol dehydrogenase GroES-like domain LPY95_18285 PF00107 Zinc-binding dehydrogenase LPY95_18290 PF02583 Metal-sensitive transcriptional repressor LPY95_18305 PF00072 Response regulator receiver domain LPY95_18305 PF00486 Transcriptional regulatory protein, C terminal LPY95_18310 PF00512 His Kinase A (phospho-acceptor) domain LPY95_18310 PF00672 HAMP domain LPY95_18310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_18315 PF04107 Glutamate-cysteine ligase family 2(GCS2) LPY95_18325 PF00753 Metallo-beta-lactamase superfamily LPY95_18325 PF10996 Beta-Casp domain LPY95_18325 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LPY95_18330 PF01926 50S ribosome-binding GTPase LPY95_18335 PF00034 Cytochrome c LPY95_18345 PF01323 DSBA-like thioredoxin domain LPY95_18360 PF02028 BCCT, betaine/carnitine/choline family transporter LPY95_18365 PF00171 Aldehyde dehydrogenase family LPY95_18370 PF05199 GMC oxidoreductase LPY95_18370 PF00732 GMC oxidoreductase LPY95_18375 PF01966 HD domain LPY95_18375 PF01743 Poly A polymerase head domain LPY95_18375 PF12627 Probable RNA and SrmB- binding site of polymerase A LPY95_18385 PF01979 Amidohydrolase family LPY95_18390 PF01380 SIS domain LPY95_18395 PF00356 Bacterial regulatory proteins, lacI family LPY95_18400 PF07690 Major Facilitator Superfamily LPY95_18405 PF00392 Bacterial regulatory proteins, gntR family LPY95_18405 PF07702 UTRA domain LPY95_18420 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LPY95_18420 PF16355 Domain of unknown function (DUF4982) LPY95_18420 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 LPY95_18420 PF00703 Glycosyl hydrolases family 2 LPY95_18420 PF02837 Glycosyl hydrolases family 2, sugar binding domain LPY95_18445 PF03934 Type II secretion system (T2SS), protein K LPY95_18450 PF11612 Type II secretion system (T2SS), protein J LPY95_18450 PF07963 Prokaryotic N-terminal methylation motif LPY95_18455 PF02501 Type II secretion system (T2SS), protein I LPY95_18455 PF07963 Prokaryotic N-terminal methylation motif LPY95_18460 PF07963 Prokaryotic N-terminal methylation motif LPY95_18460 PF12019 Type II transport protein GspH LPY95_18465 PF07963 Prokaryotic N-terminal methylation motif LPY95_18465 PF08334 Type II secretion system (T2SS), protein G LPY95_18470 PF00482 Type II secretion system (T2SS), protein F LPY95_18480 PF00263 Bacterial type II and III secretion system protein LPY95_18480 PF03958 Bacterial type II/III secretion system short domain LPY95_18525 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LPY95_18530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_18530 PF00512 His Kinase A (phospho-acceptor) domain LPY95_18535 PF00072 Response regulator receiver domain LPY95_18540 PF00360 Phytochrome region LPY95_18540 PF08446 PAS fold LPY95_18540 PF00512 His Kinase A (phospho-acceptor) domain LPY95_18540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_18540 PF01590 GAF domain LPY95_18545 PF04972 BON domain LPY95_18550 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LPY95_18550 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LPY95_18555 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LPY95_18555 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LPY95_18590 PF01467 Cytidylyltransferase-like LPY95_18590 PF00293 NUDIX domain LPY95_18600 PF03466 LysR substrate binding domain LPY95_18600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPY95_18610 PF11818 C-terminal domain of tail specific protease (DUF3340) LPY95_18610 PF03572 Peptidase family S41 LPY95_18610 PF17804 Tail specific protease N-terminal domain LPY95_18610 PF00595 PDZ domain LPY95_18615 PF04055 Radical SAM superfamily LPY95_18615 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LPY95_18620 PF03099 Biotin/lipoate A/B protein ligase family LPY95_18625 PF04359 Protein of unknown function (DUF493) LPY95_18635 PF00768 D-alanyl-D-alanine carboxypeptidase LPY95_18635 PF07943 Penicillin-binding protein 5, C-terminal domain LPY95_18640 PF05036 Sporulation related domain LPY95_18640 PF03330 Lytic transglycolase LPY95_18645 PF13406 Transglycosylase SLT domain LPY95_18650 PF00295 Glycosyl hydrolases family 28 LPY95_18655 PF01098 Cell cycle protein LPY95_18660 PF03717 Penicillin-binding Protein dimerisation domain LPY95_18660 PF00905 Penicillin binding protein transpeptidase domain LPY95_18670 PF04085 rod shape-determining protein MreC LPY95_18680 PF00294 pfkB family carbohydrate kinase LPY95_18685 PF00158 Sigma-54 interaction domain LPY95_18685 PF02954 Bacterial regulatory protein, Fis family LPY95_18685 PF01590 GAF domain LPY95_18695 PF00107 Zinc-binding dehydrogenase LPY95_18695 PF08240 Alcohol dehydrogenase GroES-like domain LPY95_18710 PF00497 Bacterial extracellular solute-binding proteins, family 3 LPY95_18715 PF13360 PQQ-like domain LPY95_18730 PF11838 ERAP1-like C-terminal domain LPY95_18730 PF01433 Peptidase family M1 domain LPY95_18735 PF00563 EAL domain LPY95_18735 PF03707 Bacterial signalling protein N terminal repeat LPY95_18735 PF00990 Diguanylate cyclase, GGDEF domain LPY95_18740 PF01209 ubiE/COQ5 methyltransferase family LPY95_18750 PF13533 Biotin-lipoyl like LPY95_18755 PF13673 Acetyltransferase (GNAT) domain LPY95_18765 PF00004 ATPase family associated with various cellular activities (AAA) LPY95_18765 PF07724 AAA domain (Cdc48 subfamily) LPY95_18765 PF10431 C-terminal, D2-small domain, of ClpB protein LPY95_18770 PF00227 Proteasome subunit LPY95_18775 PF02899 Phage integrase, N-terminal SAM-like domain LPY95_18775 PF00589 Phage integrase family LPY95_18785 PF01678 Diaminopimelate epimerase LPY95_18795 PF04304 Protein of unknown function (DUF454) LPY95_18800 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LPY95_18800 PF00326 Prolyl oligopeptidase family LPY95_18805 PF00155 Aminotransferase class I and II LPY95_18815 PF00326 Prolyl oligopeptidase family LPY95_18815 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LPY95_18840 PF03900 Porphobilinogen deaminase, C-terminal domain LPY95_18840 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LPY95_18845 PF00072 Response regulator receiver domain LPY95_18845 PF04397 LytTr DNA-binding domain LPY95_18850 PF07694 5TMR of 5TMR-LYT LPY95_18850 PF06580 Histidine kinase LPY95_18860 PF13632 Glycosyl transferase family group 2 LPY95_18875 PF00990 Diguanylate cyclase, GGDEF domain LPY95_18880 PF00916 Sulfate permease family LPY95_18880 PF01740 STAS domain LPY95_18885 PF00553 Cellulose binding domain LPY95_18885 PF00150 Cellulase (glycosyl hydrolase family 5) LPY95_18890 PF02203 Tar ligand binding domain homologue LPY95_18890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LPY95_18890 PF00672 HAMP domain LPY95_18895 PF08448 PAS fold LPY95_18895 PF08447 PAS fold LPY95_18895 PF00563 EAL domain LPY95_18895 PF00990 Diguanylate cyclase, GGDEF domain LPY95_18925 PF06827 Zinc finger found in FPG and IleRS LPY95_18925 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LPY95_18925 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LPY95_18935 PF01204 Trehalase LPY95_18945 PF01544 CorA-like Mg2+ transporter protein LPY95_18955 PF00324 Amino acid permease LPY95_18965 PF00497 Bacterial extracellular solute-binding proteins, family 3 LPY95_18970 PF00892 EamA-like transporter family LPY95_18995 PF00990 Diguanylate cyclase, GGDEF domain LPY95_19000 PF07759 Protein of unknown function (DUF1615) LPY95_19005 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region LPY95_19005 PF00326 Prolyl oligopeptidase family LPY95_19015 PF12823 Domain of unknown function (DUF3817) LPY95_19015 PF03176 MMPL family LPY95_19040 PF13409 Glutathione S-transferase, N-terminal domain LPY95_19050 PF00106 short chain dehydrogenase LPY95_19065 PF00106 short chain dehydrogenase LPY95_19110 PF02463 RecF/RecN/SMC N terminal domain LPY95_19115 PF00456 Transketolase, thiamine diphosphate binding domain LPY95_19115 PF17831 Pyruvate dehydrogenase E1 component middle domain LPY95_19120 PF07745 Glycosyl hydrolase family 53 LPY95_19150 PF13419 Haloacid dehalogenase-like hydrolase LPY95_19155 PF07729 FCD domain LPY95_19155 PF00392 Bacterial regulatory proteins, gntR family LPY95_19165 PF00698 Acyl transferase domain LPY95_19175 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase LPY95_19180 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG LPY95_19190 PF01039 Carboxyl transferase domain LPY95_19195 PF06857 Malonate decarboxylase delta subunit (MdcD) LPY95_19200 PF16957 Malonate decarboxylase, alpha subunit, transporter LPY95_19220 PF04264 YceI-like domain LPY95_19225 PF00881 Nitroreductase family LPY95_19240 PF02592 Putative vitamin uptake transporter LPY95_19245 PF03710 Glutamate-ammonia ligase adenylyltransferase LPY95_19245 PF08335 GlnD PII-uridylyltransferase LPY95_19255 PF08450 SMP-30/Gluconolactonase/LRE-like region LPY95_19270 PF00793 DAHP synthetase I family LPY95_19290 PF00118 TCP-1/cpn60 chaperonin family LPY95_19295 PF00166 Chaperonin 10 Kd subunit LPY95_19305 PF04231 Endonuclease I LPY95_19310 PF00106 short chain dehydrogenase LPY95_19320 PF01852 START domain LPY95_19335 PF03091 CutA1 divalent ion tolerance protein LPY95_19340 PF11412 Disulphide bond corrector protein DsbC LPY95_19340 PF02683 Cytochrome C biogenesis protein transmembrane region LPY95_19345 PF01220 Dehydroquinase class II LPY95_19350 PF00364 Biotin-requiring enzyme LPY95_19360 PF00289 Biotin carboxylase, N-terminal domain LPY95_19360 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LPY95_19360 PF02785 Biotin carboxylase C-terminal domain LPY95_19405 PF02954 Bacterial regulatory protein, Fis family LPY95_19435 PF00782 Dual specificity phosphatase, catalytic domain LPY95_19440 PF12146 Serine aminopeptidase, S33 LPY95_19440 PF12147 Putative methyltransferase LPY95_19445 PF01066 CDP-alcohol phosphatidyltransferase LPY95_19450 PF01808 AICARFT/IMPCHase bienzyme LPY95_19450 PF02142 MGS-like domain LPY95_19460 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LPY95_19460 PF02843 Phosphoribosylglycinamide synthetase, C domain LPY95_19460 PF02844 Phosphoribosylglycinamide synthetase, N domain LPY95_19470 PF12805 FUSC-like inner membrane protein yccS LPY95_19475 PF07690 Major Facilitator Superfamily LPY95_19480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPY95_19480 PF03466 LysR substrate binding domain LPY95_19485 PF07690 Major Facilitator Superfamily LPY95_19500 PF17113 Regulatory signalling modulator protein AmpE LPY95_19500 PF03186 CobD/Cbib protein LPY95_19505 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain LPY95_19505 PF00293 NUDIX domain LPY95_19505 PF09297 NADH pyrophosphatase zinc ribbon domain LPY95_19515 PF01521 Iron-sulphur cluster biosynthesis LPY95_19535 PF00072 Response regulator receiver domain LPY95_19535 PF00486 Transcriptional regulatory protein, C terminal LPY95_19540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_19540 PF00512 His Kinase A (phospho-acceptor) domain LPY95_19540 PF01627 Hpt domain LPY95_19540 PF00072 Response regulator receiver domain LPY95_19540 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LPY95_19540 PF00672 HAMP domain LPY95_19545 PF00210 Ferritin-like domain LPY95_19555 PF00293 NUDIX domain LPY95_19570 PF00380 Ribosomal protein S9/S16 LPY95_19575 PF00572 Ribosomal protein L13 LPY95_19580 PF03232 Ubiquinone biosynthesis protein COQ7 LPY95_19585 PF00893 Small Multidrug Resistance protein LPY95_19590 PF02675 S-adenosylmethionine decarboxylase LPY95_19595 PF00027 Cyclic nucleotide-binding domain LPY95_19595 PF00325 Bacterial regulatory proteins, crp family LPY95_19605 PF00218 Indole-3-glycerol phosphate synthase LPY95_19610 PF02885 Glycosyl transferase family, helical bundle domain LPY95_19610 PF00591 Glycosyl transferase family, a/b domain LPY95_19620 PF00117 Glutamine amidotransferase class-I LPY95_19630 PF04715 Anthranilate synthase component I, N terminal region LPY95_19630 PF00425 chorismate binding enzyme LPY95_19635 PF00781 Diacylglycerol kinase catalytic domain LPY95_19640 PF00583 Acetyltransferase (GNAT) family LPY95_19645 PF00834 Ribulose-phosphate 3 epimerase family LPY95_19655 PF00226 DnaJ domain LPY95_19655 PF05099 Tellurite resistance protein TerB LPY95_19660 PF01259 SAICAR synthetase LPY95_19680 PF00182 Chitinase class I LPY95_19685 PF01483 Proprotein convertase P-domain LPY95_19685 PF02868 Thermolysin metallopeptidase, alpha-helical domain LPY95_19685 PF07504 Fungalysin/Thermolysin Propeptide Motif LPY95_19685 PF01447 Thermolysin metallopeptidase, catalytic domain LPY95_19700 PF13244 Domain of unknown function (DUF4040) LPY95_19700 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter LPY95_19700 PF00361 Proton-conducting membrane transporter LPY95_19700 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LPY95_19705 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LPY95_19710 PF00361 Proton-conducting membrane transporter LPY95_19720 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) LPY95_19725 PF03334 Na+/H+ antiporter subunit LPY95_19745 PF04209 homogentisate 1,2-dioxygenase LPY95_19750 PF04480 Protein of unknown function (DUF559) LPY95_19755 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LPY95_19760 PF01047 MarR family LPY95_19770 PF00854 POT family LPY95_19775 PF03301 Tryptophan 2,3-dioxygenase LPY95_19785 PF00676 Dehydrogenase E1 component LPY95_19790 PF02779 Transketolase, pyrimidine binding domain LPY95_19790 PF02780 Transketolase, C-terminal domain LPY95_19800 PF00364 Biotin-requiring enzyme LPY95_19800 PF02817 e3 binding domain LPY95_19800 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LPY95_19810 PF00271 Helicase conserved C-terminal domain LPY95_19810 PF00270 DEAD/DEAH box helicase LPY95_19825 PF00873 AcrB/AcrD/AcrF family LPY95_19840 PF02321 Outer membrane efflux protein LPY95_19845 PF06903 VirK protein LPY95_19860 PF13460 NAD(P)H-binding LPY95_19865 PF00128 Alpha amylase, catalytic domain LPY95_19865 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LPY95_19875 PF00128 Alpha amylase, catalytic domain LPY95_19880 PF02446 4-alpha-glucanotransferase LPY95_19890 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LPY95_19890 PF00128 Alpha amylase, catalytic domain LPY95_19890 PF02806 Alpha amylase, C-terminal all-beta domain LPY95_19895 PF08323 Starch synthase catalytic domain LPY95_19895 PF00534 Glycosyl transferases group 1 LPY95_19900 PF00990 Diguanylate cyclase, GGDEF domain LPY95_19905 PF05661 Protein of unknown function (DUF808) LPY95_19910 PF03109 ABC1 family LPY95_19915 PF00884 Sulfatase LPY95_19920 PF12795 Mechanosensitive ion channel porin domain LPY95_19920 PF12794 Mechanosensitive ion channel inner membrane domain 1 LPY95_19920 PF00924 Mechanosensitive ion channel LPY95_19940 PF01464 Transglycosylase SLT domain LPY95_19950 PF00263 Bacterial type II and III secretion system protein LPY95_19950 PF03958 Bacterial type II/III secretion system short domain LPY95_19955 PF01311 Bacterial export proteins, family 1 LPY95_19965 PF02874 ATP synthase alpha/beta family, beta-barrel domain LPY95_19965 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LPY95_19965 PF18269 T3SS EscN ATPase C-terminal domain LPY95_19980 PF01514 Secretory protein of YscJ/FliF family LPY95_19995 PF01312 FlhB HrpN YscU SpaS Family LPY95_20000 PF00771 FHIPEP family LPY95_20015 PF00813 FliP family LPY95_20020 PF01313 Bacterial export proteins, family 3 LPY95_20060 PF05819 NolX protein LPY95_20070 PF01040 UbiA prenyltransferase family LPY95_20080 PF06968 Biotin and Thiamin Synthesis associated domain LPY95_20080 PF04055 Radical SAM superfamily LPY95_20085 PF00155 Aminotransferase class I and II LPY95_20095 PF12697 Alpha/beta hydrolase family LPY95_20105 PF13649 Methyltransferase domain LPY95_20125 PF00291 Pyridoxal-phosphate dependent enzyme LPY95_20135 PF13932 GidA associated domain LPY95_20135 PF01134 Glucose inhibited division protein A LPY95_20140 PF10677 Protein of unknown function (DUF2490) LPY95_20155 PF01614 Bacterial transcriptional regulator LPY95_20155 PF09339 IclR helix-turn-helix domain LPY95_20165 PF02627 Carboxymuconolactone decarboxylase family LPY95_20170 PF12146 Serine aminopeptidase, S33 LPY95_20175 PF00206 Lyase LPY95_20175 PF10397 Adenylosuccinate lyase C-terminus LPY95_20180 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal LPY95_20180 PF00775 Dioxygenase LPY95_20190 PF02803 Thiolase, C-terminal domain LPY95_20190 PF00108 Thiolase, N-terminal domain LPY95_20195 PF01144 Coenzyme A transferase LPY95_20200 PF01144 Coenzyme A transferase LPY95_20205 PF00355 Rieske [2Fe-2S] domain LPY95_20210 PF00111 2Fe-2S iron-sulfur cluster binding domain LPY95_20210 PF00970 Oxidoreductase FAD-binding domain LPY95_20215 PF00455 DeoR C terminal sensor domain LPY95_20215 PF08220 DeoR-like helix-turn-helix domain LPY95_20220 PF01266 FAD dependent oxidoreductase LPY95_20220 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LPY95_20225 PF00230 Major intrinsic protein LPY95_20230 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LPY95_20230 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LPY95_20245 PF01494 FAD binding domain LPY95_20255 PF00171 Aldehyde dehydrogenase family LPY95_20275 PF11871 Domain of unknown function (DUF3391) LPY95_20275 PF01966 HD domain LPY95_20280 PF07690 Major Facilitator Superfamily LPY95_20290 PF00132 Bacterial transferase hexapeptide (six repeats) LPY95_20295 PF03692 Putative zinc- or iron-chelating domain LPY95_20305 PF00920 Dehydratase family LPY95_20310 PF13495 Phage integrase, N-terminal SAM-like domain LPY95_20310 PF00589 Phage integrase family LPY95_20355 PF01638 HxlR-like helix-turn-helix LPY95_20360 PF05368 NmrA-like family LPY95_20370 PF03812 2-keto-3-deoxygluconate permease LPY95_20375 PF08267 Cobalamin-independent synthase, N-terminal domain LPY95_20375 PF01717 Cobalamin-independent synthase, Catalytic domain LPY95_20385 PF03358 NADPH-dependent FMN reductase LPY95_20390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPY95_20390 PF03466 LysR substrate binding domain LPY95_20395 PF02677 Epoxyqueuosine reductase QueH LPY95_20410 PF02321 Outer membrane efflux protein LPY95_20420 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPY95_20420 PF00529 HlyD membrane-fusion protein of T1SS LPY95_20425 PF00672 HAMP domain LPY95_20425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_20425 PF00512 His Kinase A (phospho-acceptor) domain LPY95_20430 PF00072 Response regulator receiver domain LPY95_20430 PF00486 Transcriptional regulatory protein, C terminal LPY95_20435 PF00551 Formyl transferase LPY95_20445 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LPY95_20445 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LPY95_20450 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LPY95_20455 PF02146 Sir2 family LPY95_20470 PF07690 Major Facilitator Superfamily LPY95_20500 PF01026 TatD related DNase LPY95_20505 PF03466 LysR substrate binding domain LPY95_20505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPY95_20510 PF00355 Rieske [2Fe-2S] domain LPY95_20515 PF00111 2Fe-2S iron-sulfur cluster binding domain LPY95_20520 PF00860 Permease family LPY95_20530 PF01156 Inosine-uridine preferring nucleoside hydrolase LPY95_20535 PF01425 Amidase LPY95_20550 PF07690 Major Facilitator Superfamily LPY95_20555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPY95_20555 PF03466 LysR substrate binding domain LPY95_20560 PF07687 Peptidase dimerisation domain LPY95_20560 PF01546 Peptidase family M20/M25/M40 LPY95_20565 PF00266 Aminotransferase class-V LPY95_20580 PF09349 OHCU decarboxylase LPY95_20580 PF01014 Uricase LPY95_20585 PF13454 FAD-NAD(P)-binding LPY95_20590 PF00576 HIUase/Transthyretin family LPY95_20595 PF07308 Protein of unknown function (DUF1456) LPY95_20600 PF00270 DEAD/DEAH box helicase LPY95_20600 PF04408 Helicase associated domain (HA2) LPY95_20600 PF00271 Helicase conserved C-terminal domain LPY95_20600 PF08482 ATP-dependent helicase C-terminal LPY95_20610 PF00593 TonB dependent receptor LPY95_20615 PF00849 RNA pseudouridylate synthase LPY95_20625 PF00248 Aldo/keto reductase family LPY95_20630 PF00107 Zinc-binding dehydrogenase LPY95_20630 PF16884 N-terminal domain of oxidoreductase LPY95_20660 PF02566 OsmC-like protein LPY95_20665 PF01047 MarR family LPY95_20670 PF03969 AFG1-like ATPase LPY95_20750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LPY95_20750 PF02770 Acyl-CoA dehydrogenase, middle domain LPY95_20750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LPY95_20755 PF01039 Carboxyl transferase domain LPY95_20760 PF18140 Propionyl-coenzyme A carboxylase BT domain LPY95_20760 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LPY95_20760 PF00364 Biotin-requiring enzyme LPY95_20760 PF00289 Biotin carboxylase, N-terminal domain LPY95_20760 PF02785 Biotin carboxylase C-terminal domain LPY95_20765 PF00326 Prolyl oligopeptidase family LPY95_20785 PF00990 Diguanylate cyclase, GGDEF domain LPY95_20790 PF00463 Isocitrate lyase family LPY95_20795 PF01274 Malate synthase LPY95_20800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPY95_20800 PF03466 LysR substrate binding domain LPY95_20805 PF00999 Sodium/hydrogen exchanger family LPY95_20830 PF12706 Beta-lactamase superfamily domain LPY95_20835 PF01432 Peptidase family M3 LPY95_20840 PF01112 Asparaginase LPY95_20850 PF00472 RF-1 domain LPY95_20860 PF00849 RNA pseudouridylate synthase LPY95_20870 PF03109 ABC1 family LPY95_20880 PF07478 D-ala D-ala ligase C-terminus LPY95_20880 PF01820 D-ala D-ala ligase N-terminus LPY95_20895 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family LPY95_20905 PF00501 AMP-binding enzyme LPY95_20910 PF03692 Putative zinc- or iron-chelating domain LPY95_20915 PF00561 alpha/beta hydrolase fold LPY95_20925 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LPY95_20925 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LPY95_20940 PF00588 SpoU rRNA Methylase family LPY95_20945 PF07690 Major Facilitator Superfamily LPY95_20960 PF02954 Bacterial regulatory protein, Fis family LPY95_20960 PF00072 Response regulator receiver domain LPY95_20960 PF00158 Sigma-54 interaction domain LPY95_20965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_20970 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LPY95_20970 PF00205 Thiamine pyrophosphate enzyme, central domain LPY95_20970 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LPY95_20985 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LPY95_20985 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LPY95_20990 PF02556 Preprotein translocase subunit SecB LPY95_20995 PF00581 Rhodanese-like domain LPY95_21030 PF02803 Thiolase, C-terminal domain LPY95_21030 PF00108 Thiolase, N-terminal domain LPY95_21055 PF00080 Copper/zinc superoxide dismutase (SODC) LPY95_21060 PF00080 Copper/zinc superoxide dismutase (SODC) LPY95_21065 PF00072 Response regulator receiver domain LPY95_21065 PF02954 Bacterial regulatory protein, Fis family LPY95_21065 PF00158 Sigma-54 interaction domain LPY95_21070 PF00512 His Kinase A (phospho-acceptor) domain LPY95_21070 PF00989 PAS fold LPY95_21070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_21075 PF00909 Ammonium Transporter Family LPY95_21080 PF00543 Nitrogen regulatory protein P-II LPY95_21085 PF00120 Glutamine synthetase, catalytic domain LPY95_21085 PF03951 Glutamine synthetase, beta-Grasp domain LPY95_21090 PF02673 Bacitracin resistance protein BacA LPY95_21100 PF01161 Phosphatidylethanolamine-binding protein LPY95_21125 PF03061 Thioesterase superfamily LPY95_21130 PF13091 PLD-like domain LPY95_21145 PF01883 Iron-sulfur cluster assembly protein LPY95_21145 PF10609 NUBPL iron-transfer P-loop NTPase LPY95_21165 PF01381 Helix-turn-helix LPY95_21185 PF12867 DinB superfamily LPY95_21185 PF03781 Sulfatase-modifying factor enzyme 1 LPY95_21195 PF00528 Binding-protein-dependent transport system inner membrane component LPY95_21200 PF00005 ABC transporter LPY95_21215 PF00005 ABC transporter LPY95_21225 PF01734 Patatin-like phospholipase LPY95_21230 PF07660 Secretin and TonB N terminus short domain LPY95_21230 PF07715 TonB-dependent Receptor Plug Domain LPY95_21230 PF00593 TonB dependent receptor LPY95_21235 PF01037 Lrp/AsnC ligand binding domain LPY95_21240 PF00351 Biopterin-dependent aromatic amino acid hydroxylase LPY95_21255 PF00657 GDSL-like Lipase/Acylhydrolase LPY95_21270 PF04962 KduI/IolB family LPY95_21275 PF00356 Bacterial regulatory proteins, lacI family LPY95_21280 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain LPY95_21280 PF04616 Glycosyl hydrolases family 43 LPY95_21285 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LPY95_21295 PF03480 Bacterial extracellular solute-binding protein, family 7 LPY95_21310 PF00135 Carboxylesterase family LPY95_21315 PF00248 Aldo/keto reductase family LPY95_21320 PF03377 TAL effector repeat LPY95_21350 PF04357 TamB, inner membrane protein subunit of TAM complex LPY95_21355 PF01103 Surface antigen LPY95_21355 PF17243 POTRA domain TamA domain 1 LPY95_21360 PF07715 TonB-dependent Receptor Plug Domain LPY95_21360 PF00593 TonB dependent receptor LPY95_21365 PF13181 Tetratricopeptide repeat LPY95_21370 PF05746 DALR anticodon binding domain LPY95_21370 PF02092 Glycyl-tRNA synthetase beta subunit LPY95_21375 PF02091 Glycyl-tRNA synthetase alpha subunit LPY95_21380 PF00437 Type II/IV secretion system protein LPY95_21380 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LPY95_21390 PF00117 Glutamine amidotransferase class-I LPY95_21390 PF00958 GMP synthase C terminal domain LPY95_21400 PF00902 Sec-independent protein translocase protein (TatC) LPY95_21405 PF02416 mttA/Hcf106 family LPY95_21410 PF02416 mttA/Hcf106 family LPY95_21420 PF00762 Ferrochelatase LPY95_21425 PF12697 Alpha/beta hydrolase family LPY95_21435 PF04381 Putative exonuclease, RdgC LPY95_21440 PF01171 PP-loop family LPY95_21450 PF00356 Bacterial regulatory proteins, lacI family LPY95_21455 PF07477 Glycosyl hydrolase family 67 C-terminus LPY95_21455 PF07488 Glycosyl hydrolase family 67 middle domain LPY95_21455 PF03648 Glycosyl hydrolase family 67 N-terminus LPY95_21465 PF13378 Enolase C-terminal domain-like LPY95_21465 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LPY95_21470 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain LPY95_21470 PF04616 Glycosyl hydrolases family 43 LPY95_21475 PF00933 Glycosyl hydrolase family 3 N terminal domain LPY95_21475 PF01915 Glycosyl hydrolase family 3 C-terminal domain LPY95_21475 PF07691 PA14 domain LPY95_21475 PF14310 Fibronectin type III-like domain LPY95_21480 PF08125 Mannitol dehydrogenase C-terminal domain LPY95_21480 PF01232 Mannitol dehydrogenase Rossmann domain LPY95_21530 PF00202 Aminotransferase class-III LPY95_21540 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LPY95_21540 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LPY95_21555 PF08450 SMP-30/Gluconolactonase/LRE-like region LPY95_21565 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 LPY95_21565 PF00703 Glycosyl hydrolases family 2 LPY95_21565 PF16355 Domain of unknown function (DUF4982) LPY95_21565 PF02837 Glycosyl hydrolases family 2, sugar binding domain LPY95_21565 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LPY95_21570 PF02614 Glucuronate isomerase LPY95_21590 PF00553 Cellulose binding domain LPY95_21590 PF03422 Carbohydrate binding module (family 6) LPY95_21590 PF00331 Glycosyl hydrolase family 10 LPY95_21610 PF04616 Glycosyl hydrolases family 43 LPY95_21675 PF00109 Beta-ketoacyl synthase, N-terminal domain LPY95_21675 PF00107 Zinc-binding dehydrogenase LPY95_21675 PF02801 Beta-ketoacyl synthase, C-terminal domain LPY95_21675 PF08659 KR domain LPY95_21675 PF00550 Phosphopantetheine attachment site LPY95_21675 PF14765 Polyketide synthase dehydratase LPY95_21675 PF08240 Alcohol dehydrogenase GroES-like domain LPY95_21675 PF16197 Ketoacyl-synthetase C-terminal extension LPY95_21675 PF00698 Acyl transferase domain LPY95_21680 PF01553 Acyltransferase LPY95_21690 PF00356 Bacterial regulatory proteins, lacI family LPY95_21705 PF04820 Tryptophan halogenase LPY95_21710 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LPY95_21715 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) LPY95_21720 PF04337 Protein of unknown function, DUF480 LPY95_21730 PF13302 Acetyltransferase (GNAT) domain LPY95_21735 PF13361 UvrD-like helicase C-terminal domain LPY95_21735 PF00580 UvrD/REP helicase N-terminal domain LPY95_21740 PF00265 Thymidine kinase LPY95_21745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPY95_21745 PF01590 GAF domain LPY95_21745 PF00512 His Kinase A (phospho-acceptor) domain LPY95_21745 PF08446 PAS fold LPY95_21745 PF00360 Phytochrome region LPY95_21750 PF04349 Periplasmic glucan biosynthesis protein, MdoG LPY95_21760 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LPY95_21760 PF06827 Zinc finger found in FPG and IleRS LPY95_21760 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LPY95_21790 PF03594 Benzoate membrane transport protein LPY95_21795 PF01590 GAF domain LPY95_21795 PF08446 PAS fold LPY95_21795 PF13426 PAS domain LPY95_21795 PF00360 Phytochrome region LPY95_21800 PF01126 Heme oxygenase LPY95_21805 PF07690 Major Facilitator Superfamily LPY95_21810 PF01263 Aldose 1-epimerase LPY95_21820 PF02810 SEC-C motif LPY95_21825 PF01925 Sulfite exporter TauE/SafE LPY95_21845 PF01227 GTP cyclohydrolase I LPY95_21855 PF07869 Protein of unknown function (DUF1656) LPY95_21860 PF00529 HlyD membrane-fusion protein of T1SS LPY95_21860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPY95_21865 PF02321 Outer membrane efflux protein LPY95_21870 PF04632 Fusaric acid resistance protein family LPY95_21875 PF00083 Sugar (and other) transporter LPY95_21880 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family LPY95_21885 PF13396 Phospholipase_D-nuclease N-terminal LPY95_21885 PF13091 PLD-like domain LPY95_21920 PF01850 PIN domain LPY95_21950 PF00849 RNA pseudouridylate synthase LPY95_21960 PF02785 Biotin carboxylase C-terminal domain LPY95_21960 PF00289 Biotin carboxylase, N-terminal domain LPY95_21960 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LPY95_21965 PF01425 Amidase LPY95_21995 PF13538 UvrD-like helicase C-terminal domain LPY95_22000 PF00580 UvrD/REP helicase N-terminal domain LPY95_22000 PF13361 UvrD-like helicase C-terminal domain LPY95_22000 PF12705 PD-(D/E)XK nuclease superfamily LPY95_22020 PF00005 ABC transporter LPY95_22025 PF02405 Permease MlaE LPY95_22030 PF02470 MlaD protein LPY95_22035 PF05494 MlaC protein LPY95_22045 PF04333 MlaA lipoprotein LPY95_22055 PF00255 Glutathione peroxidase LPY95_22065 PF02646 RmuC family LPY95_22070 PF00107 Zinc-binding dehydrogenase LPY95_22070 PF08240 Alcohol dehydrogenase GroES-like domain LPY95_22075 PF03466 LysR substrate binding domain LPY95_22075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPY95_22085 PF13417 Glutathione S-transferase, N-terminal domain LPY95_22085 PF00043 Glutathione S-transferase, C-terminal domain LPY95_22095 PF13520 Amino acid permease LPY95_22100 PF07971 Glycosyl hydrolase family 92 LPY95_22100 PF17678 Glycosyl hydrolase family 92 N-terminal domain LPY95_22105 PF10947 Protein of unknown function (DUF2628) LPY95_22110 PF00990 Diguanylate cyclase, GGDEF domain LPY95_22140 PF10672 S-adenosylmethionine-dependent methyltransferase LPY95_22140 PF17785 PUA-like domain LPY95_22145 PF03741 Integral membrane protein TerC family LPY95_22150 PF01694 Rhomboid family LPY95_22155 PF03009 Glycerophosphoryl diester phosphodiesterase family LPY95_22165 PF01569 PAP2 superfamily LPY95_22170 PF12631 MnmE helical domain LPY95_22170 PF10396 GTP-binding protein TrmE N-terminus LPY95_22170 PF01926 50S ribosome-binding GTPase LPY95_22175 PF01522 Polysaccharide deacetylase LPY95_22180 PF14849 YidC periplasmic domain LPY95_22180 PF02096 60Kd inner membrane protein LPY95_22185 PF00825 Ribonuclease P LPY95_22190 PF00468 Ribosomal protein L34 LPY95_22195 PF07015 VirC1 protein LPY95_22230 PF03377 TAL effector repeat LPY95_22240 PF00376 MerR family regulatory protein LPY95_22240 PF13614 AAA domain LPY95_22260 PF00239 Resolvase, N terminal domain LPY95_22260 PF02796 Helix-turn-helix domain of resolvase LPY95_22280 PF03377 TAL effector repeat LPY95_22335 PF03377 TAL effector repeat LPY95_22365 PF13614 AAA domain LPY95_22420 PF03377 TAL effector repeat LPY95_22465 PF13614 AAA domain LPY95_22490 PF13700 Domain of unknown function (DUF4158) LPY95_22490 PF01526 Tn3 transposase DDE domain LPY95_22525 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LPY95_22530 PF03377 TAL effector repeat LPY95_22535 PF03377 TAL effector repeat LPY95_22545 PF13406 Transglycosylase SLT domain LPY95_22560 PF02796 Helix-turn-helix domain of resolvase LPY95_22560 PF00239 Resolvase, N terminal domain LPY95_22575 PF01526 Tn3 transposase DDE domain LPY95_22575 PF13700 Domain of unknown function (DUF4158) LPY95_22580 PF02810 SEC-C motif LPY95_22580 PF03695 Uncharacterised protein family (UPF0149)