locus-tag class description CIW72_00005 PF00308 Bacterial dnaA protein CIW72_00005 PF08299 Bacterial dnaA protein helix-turn-helix CIW72_00005 PF11638 DnaA N-terminal domain CIW72_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CIW72_00010 PF02767 DNA polymerase III beta subunit, central domain CIW72_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CIW72_00015 PF02463 RecF/RecN/SMC N terminal domain CIW72_00020 PF00204 DNA gyrase B CIW72_00020 PF00986 DNA gyrase B subunit, carboxyl terminus CIW72_00020 PF18053 DNA gyrase B subunit insert domain CIW72_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_00020 PF01751 Toprim domain CIW72_00030 PF01435 Peptidase family M48 CIW72_00040 PF03544 Gram-negative bacterial TonB protein C-terminal CIW72_00045 PF01618 MotA/TolQ/ExbB proton channel family CIW72_00050 PF02472 Biopolymer transport protein ExbD/TolR CIW72_00055 PF02472 Biopolymer transport protein ExbD/TolR CIW72_00060 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CIW72_00070 PF13396 Phospholipase_D-nuclease N-terminal CIW72_00070 PF13091 PLD-like domain CIW72_00085 PF04055 Radical SAM superfamily CIW72_00110 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CIW72_00110 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CIW72_00115 PF13180 PDZ domain CIW72_00115 PF03572 Peptidase family S41 CIW72_00120 PF01551 Peptidase family M23 CIW72_00130 PF04389 Peptidase family M28 CIW72_00140 PF00150 Cellulase (glycosyl hydrolase family 5) CIW72_00150 PF00150 Cellulase (glycosyl hydrolase family 5) CIW72_00160 PF00150 Cellulase (glycosyl hydrolase family 5) CIW72_00170 PF08240 Alcohol dehydrogenase GroES-like domain CIW72_00170 PF00107 Zinc-binding dehydrogenase CIW72_00175 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CIW72_00175 PF07992 Pyridine nucleotide-disulphide oxidoreductase CIW72_00180 PF00310 Glutamine amidotransferases class-II CIW72_00180 PF04898 Glutamate synthase central domain CIW72_00180 PF01645 Conserved region in glutamate synthase CIW72_00180 PF01493 GXGXG motif CIW72_00230 PF02397 Bacterial sugar transferase CIW72_00235 PF02350 UDP-N-acetylglucosamine 2-epimerase CIW72_00245 PF03808 Glycosyl transferase WecB/TagA/CpsF family CIW72_00250 PF00534 Glycosyl transferases group 1 CIW72_00250 PF13439 Glycosyltransferase Family 4 CIW72_00270 PF13537 Glutamine amidotransferase domain CIW72_00270 PF00733 Asparagine synthase CIW72_00285 PF16363 GDP-mannose 4,6 dehydratase CIW72_00300 PF00005 ABC transporter CIW72_00300 PF00664 ABC transporter transmembrane region CIW72_00315 PF13537 Glutamine amidotransferase domain CIW72_00315 PF00733 Asparagine synthase CIW72_00330 PF07475 HPr Serine kinase C-terminal domain CIW72_00330 PF02603 HPr Serine kinase N terminus CIW72_00335 PF00685 Sulfotransferase domain CIW72_00425 PF00270 DEAD/DEAH box helicase CIW72_00425 PF09369 Domain of unknown function (DUF1998) CIW72_00425 PF00271 Helicase conserved C-terminal domain CIW72_00430 PF03006 Haemolysin-III related CIW72_00450 PF00106 short chain dehydrogenase CIW72_00460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW72_00460 PF03466 LysR substrate binding domain CIW72_00470 PF02525 Flavodoxin-like fold CIW72_00500 PF05532 CsbD-like CIW72_00520 PF01447 Thermolysin metallopeptidase, catalytic domain CIW72_00520 PF02868 Thermolysin metallopeptidase, alpha-helical domain CIW72_00520 PF16485 Protealysin propeptide CIW72_00530 PF00293 NUDIX domain CIW72_00530 PF13344 Haloacid dehalogenase-like hydrolase CIW72_00550 PF00085 Thioredoxin CIW72_00600 PF17863 AAA lid domain CIW72_00600 PF07726 ATPase family associated with various cellular activities (AAA) CIW72_00630 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CIW72_00635 PF00155 Aminotransferase class I and II CIW72_00640 PF00593 TonB dependent receptor CIW72_00640 PF07715 TonB-dependent Receptor Plug Domain CIW72_00700 PF02735 Ku70/Ku80 beta-barrel domain CIW72_00705 PF01070 FMN-dependent dehydrogenase CIW72_00715 PF00144 Beta-lactamase CIW72_00720 PF07730 Histidine kinase CIW72_00725 PF00072 Response regulator receiver domain CIW72_00725 PF00196 Bacterial regulatory proteins, luxR family CIW72_00745 PF00486 Transcriptional regulatory protein, C terminal CIW72_00745 PF18500 CadC C-terminal domain 1 CIW72_00750 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase CIW72_00750 PF12241 Trans-2-enoyl-CoA reductase catalytic region CIW72_00750 PF07055 Enoyl reductase FAD binding domain CIW72_00760 PF00294 pfkB family carbohydrate kinase CIW72_00805 PF00128 Alpha amylase, catalytic domain CIW72_00805 PF11896 Domain of unknown function (DUF3416) CIW72_00810 PF00128 Alpha amylase, catalytic domain CIW72_00810 PF16657 Maltogenic Amylase, C-terminal domain CIW72_00815 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CIW72_00815 PF02806 Alpha amylase, C-terminal all-beta domain CIW72_00815 PF00128 Alpha amylase, catalytic domain CIW72_00825 PF00248 Aldo/keto reductase family CIW72_00830 PF00135 Carboxylesterase family CIW72_00835 PF07859 alpha/beta hydrolase fold CIW72_00835 PF13472 GDSL-like Lipase/Acylhydrolase family CIW72_00845 PF03480 Bacterial extracellular solute-binding protein, family 7 CIW72_00855 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CIW72_00860 PF04616 Glycosyl hydrolases family 43 CIW72_00860 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CIW72_00865 PF00356 Bacterial regulatory proteins, lacI family CIW72_00870 PF04962 KduI/IolB family CIW72_00885 PF00657 GDSL-like Lipase/Acylhydrolase CIW72_00900 PF00351 Biopterin-dependent aromatic amino acid hydroxylase CIW72_00905 PF01037 Lrp/AsnC ligand binding domain CIW72_00910 PF07660 Secretin and TonB N terminus short domain CIW72_00910 PF07715 TonB-dependent Receptor Plug Domain CIW72_00910 PF00593 TonB dependent receptor CIW72_00915 PF01734 Patatin-like phospholipase CIW72_00925 PF00005 ABC transporter CIW72_00940 PF00005 ABC transporter CIW72_00945 PF00528 Binding-protein-dependent transport system inner membrane component CIW72_00955 PF03781 Sulfatase-modifying factor enzyme 1 CIW72_00955 PF12867 DinB superfamily CIW72_00975 PF01381 Helix-turn-helix CIW72_01000 PF01883 Iron-sulfur cluster assembly protein CIW72_01000 PF10609 NUBPL iron-transfer P-loop NTPase CIW72_01015 PF13091 PLD-like domain CIW72_01020 PF03061 Thioesterase superfamily CIW72_01045 PF01161 Phosphatidylethanolamine-binding protein CIW72_01055 PF02673 Bacitracin resistance protein BacA CIW72_01060 PF03951 Glutamine synthetase, beta-Grasp domain CIW72_01060 PF00120 Glutamine synthetase, catalytic domain CIW72_01065 PF00543 Nitrogen regulatory protein P-II CIW72_01070 PF00909 Ammonium Transporter Family CIW72_01075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_01075 PF00512 His Kinase A (phospho-acceptor) domain CIW72_01075 PF00989 PAS fold CIW72_01080 PF02954 Bacterial regulatory protein, Fis family CIW72_01080 PF00072 Response regulator receiver domain CIW72_01080 PF00158 Sigma-54 interaction domain CIW72_01085 PF00080 Copper/zinc superoxide dismutase (SODC) CIW72_01090 PF00080 Copper/zinc superoxide dismutase (SODC) CIW72_01105 PF00108 Thiolase, N-terminal domain CIW72_01105 PF02803 Thiolase, C-terminal domain CIW72_01140 PF00581 Rhodanese-like domain CIW72_01145 PF02556 Preprotein translocase subunit SecB CIW72_01150 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CIW72_01150 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CIW72_01165 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CIW72_01165 PF00205 Thiamine pyrophosphate enzyme, central domain CIW72_01165 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CIW72_01170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_01175 PF02954 Bacterial regulatory protein, Fis family CIW72_01175 PF00072 Response regulator receiver domain CIW72_01175 PF00158 Sigma-54 interaction domain CIW72_01190 PF07690 Major Facilitator Superfamily CIW72_01195 PF00588 SpoU rRNA Methylase family CIW72_01210 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CIW72_01210 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CIW72_01215 PF13784 Fic/DOC family N-terminal CIW72_01215 PF02661 Fic/DOC family CIW72_01220 PF00561 alpha/beta hydrolase fold CIW72_01225 PF03692 Putative zinc- or iron-chelating domain CIW72_01230 PF00501 AMP-binding enzyme CIW72_01240 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family CIW72_01255 PF07478 D-ala D-ala ligase C-terminus CIW72_01255 PF01820 D-ala D-ala ligase N-terminus CIW72_01265 PF03109 ABC1 family CIW72_01275 PF00849 RNA pseudouridylate synthase CIW72_01285 PF00472 RF-1 domain CIW72_01295 PF01112 Asparaginase CIW72_01300 PF01432 Peptidase family M3 CIW72_01330 PF00999 Sodium/hydrogen exchanger family CIW72_01340 PF01274 Malate synthase CIW72_01345 PF00463 Isocitrate lyase family CIW72_01350 PF00990 Diguanylate cyclase, GGDEF domain CIW72_01370 PF00326 Prolyl oligopeptidase family CIW72_01375 PF02785 Biotin carboxylase C-terminal domain CIW72_01375 PF00289 Biotin carboxylase, N-terminal domain CIW72_01375 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CIW72_01375 PF00364 Biotin-requiring enzyme CIW72_01380 PF01039 Carboxyl transferase domain CIW72_01385 PF02770 Acyl-CoA dehydrogenase, middle domain CIW72_01385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CIW72_01385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CIW72_01465 PF03969 AFG1-like ATPase CIW72_01470 PF01047 MarR family CIW72_01475 PF02566 OsmC-like protein CIW72_01505 PF00107 Zinc-binding dehydrogenase CIW72_01505 PF16884 N-terminal domain of oxidoreductase CIW72_01520 PF00849 RNA pseudouridylate synthase CIW72_01525 PF00593 TonB dependent receptor CIW72_01535 PF08482 ATP-dependent helicase C-terminal CIW72_01535 PF00271 Helicase conserved C-terminal domain CIW72_01535 PF04408 Helicase associated domain (HA2) CIW72_01535 PF00270 DEAD/DEAH box helicase CIW72_01545 PF07308 Protein of unknown function (DUF1456) CIW72_01550 PF00576 HIUase/Transthyretin family CIW72_01555 PF13454 FAD-NAD(P)-binding CIW72_01560 PF09349 OHCU decarboxylase CIW72_01560 PF01014 Uricase CIW72_01575 PF00266 Aminotransferase class-V CIW72_01580 PF07687 Peptidase dimerisation domain CIW72_01580 PF01546 Peptidase family M20/M25/M40 CIW72_01585 PF03466 LysR substrate binding domain CIW72_01585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW72_01590 PF07690 Major Facilitator Superfamily CIW72_01605 PF01425 Amidase CIW72_01610 PF01156 Inosine-uridine preferring nucleoside hydrolase CIW72_01620 PF00860 Permease family CIW72_01630 PF00111 2Fe-2S iron-sulfur cluster binding domain CIW72_01635 PF00355 Rieske [2Fe-2S] domain CIW72_01640 PF03466 LysR substrate binding domain CIW72_01640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW72_01645 PF01026 TatD related DNase CIW72_01660 PF03466 LysR substrate binding domain CIW72_01660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW72_01665 PF07690 Major Facilitator Superfamily CIW72_01680 PF02146 Sir2 family CIW72_01685 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CIW72_01690 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CIW72_01690 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CIW72_01700 PF00551 Formyl transferase CIW72_01705 PF00072 Response regulator receiver domain CIW72_01705 PF00486 Transcriptional regulatory protein, C terminal CIW72_01710 PF00512 His Kinase A (phospho-acceptor) domain CIW72_01710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_01710 PF00672 HAMP domain CIW72_01715 PF00529 HlyD membrane-fusion protein of T1SS CIW72_01715 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CIW72_01725 PF02321 Outer membrane efflux protein CIW72_01740 PF02677 Epoxyqueuosine reductase QueH CIW72_01745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW72_01745 PF03466 LysR substrate binding domain CIW72_01750 PF03358 NADPH-dependent FMN reductase CIW72_01760 PF08267 Cobalamin-independent synthase, N-terminal domain CIW72_01760 PF01717 Cobalamin-independent synthase, Catalytic domain CIW72_01765 PF03812 2-keto-3-deoxygluconate permease CIW72_01780 PF05368 NmrA-like family CIW72_01785 PF01638 HxlR-like helix-turn-helix CIW72_01835 PF13495 Phage integrase, N-terminal SAM-like domain CIW72_01835 PF00589 Phage integrase family CIW72_01840 PF00920 Dehydratase family CIW72_01855 PF00132 Bacterial transferase hexapeptide (six repeats) CIW72_01865 PF07690 Major Facilitator Superfamily CIW72_01870 PF01966 HD domain CIW72_01870 PF11871 Domain of unknown function (DUF3391) CIW72_01890 PF00171 Aldehyde dehydrogenase family CIW72_01900 PF01494 FAD binding domain CIW72_01910 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CIW72_01910 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CIW72_01915 PF00230 Major intrinsic protein CIW72_01920 PF01266 FAD dependent oxidoreductase CIW72_01920 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CIW72_01925 PF00455 DeoR C terminal sensor domain CIW72_01925 PF08220 DeoR-like helix-turn-helix domain CIW72_01935 PF00355 Rieske [2Fe-2S] domain CIW72_01940 PF01144 Coenzyme A transferase CIW72_01945 PF01144 Coenzyme A transferase CIW72_01950 PF00108 Thiolase, N-terminal domain CIW72_01950 PF02803 Thiolase, C-terminal domain CIW72_01960 PF00775 Dioxygenase CIW72_01960 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal CIW72_01965 PF00206 Lyase CIW72_01965 PF10397 Adenylosuccinate lyase C-terminus CIW72_01970 PF12146 Serine aminopeptidase, S33 CIW72_01975 PF02627 Carboxymuconolactone decarboxylase family CIW72_01985 PF01614 Bacterial transcriptional regulator CIW72_01985 PF09339 IclR helix-turn-helix domain CIW72_02000 PF10677 Protein of unknown function (DUF2490) CIW72_02005 PF01134 Glucose inhibited division protein A CIW72_02005 PF13932 GidA associated domain CIW72_02020 PF00291 Pyridoxal-phosphate dependent enzyme CIW72_02040 PF13649 Methyltransferase domain CIW72_02045 PF00106 short chain dehydrogenase CIW72_02050 PF12697 Alpha/beta hydrolase family CIW72_02060 PF00155 Aminotransferase class I and II CIW72_02065 PF06968 Biotin and Thiamin Synthesis associated domain CIW72_02065 PF04055 Radical SAM superfamily CIW72_02075 PF01040 UbiA prenyltransferase family CIW72_02095 PF05819 NolX protein CIW72_02130 PF01313 Bacterial export proteins, family 3 CIW72_02135 PF00813 FliP family CIW72_02150 PF00771 FHIPEP family CIW72_02155 PF01312 FlhB HrpN YscU SpaS Family CIW72_02170 PF01514 Secretory protein of YscJ/FliF family CIW72_02185 PF18269 T3SS EscN ATPase C-terminal domain CIW72_02185 PF02874 ATP synthase alpha/beta family, beta-barrel domain CIW72_02185 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CIW72_02195 PF01311 Bacterial export proteins, family 1 CIW72_02210 PF01464 Transglycosylase SLT domain CIW72_02225 PF12794 Mechanosensitive ion channel inner membrane domain 1 CIW72_02225 PF12795 Mechanosensitive ion channel porin domain CIW72_02225 PF00924 Mechanosensitive ion channel CIW72_02230 PF00884 Sulfatase CIW72_02240 PF03109 ABC1 family CIW72_02245 PF05661 Protein of unknown function (DUF808) CIW72_02250 PF00990 Diguanylate cyclase, GGDEF domain CIW72_02250 PF00072 Response regulator receiver domain CIW72_02255 PF08323 Starch synthase catalytic domain CIW72_02255 PF00534 Glycosyl transferases group 1 CIW72_02260 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CIW72_02260 PF02806 Alpha amylase, C-terminal all-beta domain CIW72_02260 PF00128 Alpha amylase, catalytic domain CIW72_02265 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CIW72_02265 PF11941 Domain of unknown function (DUF3459) CIW72_02265 PF00128 Alpha amylase, catalytic domain CIW72_02270 PF02446 4-alpha-glucanotransferase CIW72_02275 PF00128 Alpha amylase, catalytic domain CIW72_02285 PF00128 Alpha amylase, catalytic domain CIW72_02285 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CIW72_02290 PF13460 NAD(P)H-binding CIW72_02310 PF06903 VirK protein CIW72_02315 PF02321 Outer membrane efflux protein CIW72_02345 PF00270 DEAD/DEAH box helicase CIW72_02345 PF00271 Helicase conserved C-terminal domain CIW72_02350 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CIW72_02350 PF02817 e3 binding domain CIW72_02350 PF00364 Biotin-requiring enzyme CIW72_02360 PF02779 Transketolase, pyrimidine binding domain CIW72_02360 PF02780 Transketolase, C-terminal domain CIW72_02365 PF00676 Dehydrogenase E1 component CIW72_02375 PF03301 Tryptophan 2,3-dioxygenase CIW72_02380 PF00854 POT family CIW72_02390 PF01047 MarR family CIW72_02395 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CIW72_02400 PF04480 Protein of unknown function (DUF559) CIW72_02405 PF04209 homogentisate 1,2-dioxygenase CIW72_02425 PF03334 Na+/H+ antiporter subunit CIW72_02430 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CIW72_02440 PF00361 Proton-conducting membrane transporter CIW72_02445 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CIW72_02450 PF00361 Proton-conducting membrane transporter CIW72_02450 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CIW72_02450 PF13244 Domain of unknown function (DUF4040) CIW72_02450 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CIW72_02465 PF02868 Thermolysin metallopeptidase, alpha-helical domain CIW72_02465 PF01447 Thermolysin metallopeptidase, catalytic domain CIW72_02465 PF01483 Proprotein convertase P-domain CIW72_02465 PF07504 Fungalysin/Thermolysin Propeptide Motif CIW72_02470 PF00182 Chitinase class I CIW72_02490 PF01259 SAICAR synthetase CIW72_02495 PF05099 Tellurite resistance protein TerB CIW72_02495 PF00226 DnaJ domain CIW72_02505 PF00834 Ribulose-phosphate 3 epimerase family CIW72_02510 PF00583 Acetyltransferase (GNAT) family CIW72_02515 PF00589 Phage integrase family CIW72_02515 PF13356 Arm DNA-binding domain CIW72_02605 PF00781 Diacylglycerol kinase catalytic domain CIW72_02610 PF04715 Anthranilate synthase component I, N terminal region CIW72_02610 PF00425 chorismate binding enzyme CIW72_02620 PF00117 Glutamine amidotransferase class-I CIW72_02630 PF02885 Glycosyl transferase family, helical bundle domain CIW72_02630 PF00591 Glycosyl transferase family, a/b domain CIW72_02635 PF00218 Indole-3-glycerol phosphate synthase CIW72_02645 PF00027 Cyclic nucleotide-binding domain CIW72_02645 PF00325 Bacterial regulatory proteins, crp family CIW72_02650 PF02675 S-adenosylmethionine decarboxylase CIW72_02655 PF00893 Small Multidrug Resistance protein CIW72_02665 PF03232 Ubiquinone biosynthesis protein COQ7 CIW72_02670 PF00572 Ribosomal protein L13 CIW72_02675 PF00380 Ribosomal protein S9/S16 CIW72_02690 PF00293 NUDIX domain CIW72_02700 PF00210 Ferritin-like domain CIW72_02705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_02705 PF00672 HAMP domain CIW72_02705 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CIW72_02705 PF00512 His Kinase A (phospho-acceptor) domain CIW72_02705 PF00072 Response regulator receiver domain CIW72_02705 PF01627 Hpt domain CIW72_02710 PF00486 Transcriptional regulatory protein, C terminal CIW72_02710 PF00072 Response regulator receiver domain CIW72_02730 PF01521 Iron-sulphur cluster biosynthesis CIW72_02745 PF00293 NUDIX domain CIW72_02745 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain CIW72_02745 PF09297 NADH pyrophosphatase zinc ribbon domain CIW72_02750 PF17113 Regulatory signalling modulator protein AmpE CIW72_02750 PF03186 CobD/Cbib protein CIW72_02770 PF07690 Major Facilitator Superfamily CIW72_02780 PF07690 Major Facilitator Superfamily CIW72_02785 PF12805 FUSC-like inner membrane protein yccS CIW72_02795 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CIW72_02795 PF02844 Phosphoribosylglycinamide synthetase, N domain CIW72_02795 PF02843 Phosphoribosylglycinamide synthetase, C domain CIW72_02805 PF02142 MGS-like domain CIW72_02805 PF01808 AICARFT/IMPCHase bienzyme CIW72_02810 PF01066 CDP-alcohol phosphatidyltransferase CIW72_02815 PF12147 Putative methyltransferase CIW72_02815 PF12146 Serine aminopeptidase, S33 CIW72_02820 PF00782 Dual specificity phosphatase, catalytic domain CIW72_02850 PF02954 Bacterial regulatory protein, Fis family CIW72_02865 PF01381 Helix-turn-helix CIW72_02895 PF00289 Biotin carboxylase, N-terminal domain CIW72_02895 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CIW72_02895 PF02785 Biotin carboxylase C-terminal domain CIW72_02905 PF00364 Biotin-requiring enzyme CIW72_02910 PF01220 Dehydroquinase class II CIW72_02915 PF02683 Cytochrome C biogenesis protein transmembrane region CIW72_02915 PF11412 Disulphide bond corrector protein DsbC CIW72_02920 PF03091 CutA1 divalent ion tolerance protein CIW72_02935 PF01852 START domain CIW72_02950 PF00106 short chain dehydrogenase CIW72_02955 PF04231 Endonuclease I CIW72_02965 PF00166 Chaperonin 10 Kd subunit CIW72_02970 PF00118 TCP-1/cpn60 chaperonin family CIW72_02985 PF00793 DAHP synthetase I family CIW72_03000 PF08450 SMP-30/Gluconolactonase/LRE-like region CIW72_03010 PF03710 Glutamate-ammonia ligase adenylyltransferase CIW72_03010 PF08335 GlnD PII-uridylyltransferase CIW72_03015 PF02592 Putative vitamin uptake transporter CIW72_03035 PF00881 Nitroreductase family CIW72_03040 PF04264 YceI-like domain CIW72_03065 PF16957 Malonate decarboxylase, alpha subunit, transporter CIW72_03070 PF06857 Malonate decarboxylase delta subunit (MdcD) CIW72_03075 PF01039 Carboxyl transferase domain CIW72_03085 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG CIW72_03090 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CIW72_03095 PF00698 Acyl transferase domain CIW72_03105 PF07729 FCD domain CIW72_03105 PF00392 Bacterial regulatory proteins, gntR family CIW72_03110 PF13419 Haloacid dehalogenase-like hydrolase CIW72_03145 PF00456 Transketolase, thiamine diphosphate binding domain CIW72_03145 PF17831 Pyruvate dehydrogenase E1 component middle domain CIW72_03150 PF02463 RecF/RecN/SMC N terminal domain CIW72_03195 PF00106 short chain dehydrogenase CIW72_03205 PF13409 Glutathione S-transferase, N-terminal domain CIW72_03230 PF12823 Domain of unknown function (DUF3817) CIW72_03230 PF03176 MMPL family CIW72_03240 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CIW72_03240 PF00326 Prolyl oligopeptidase family CIW72_03245 PF07759 Protein of unknown function (DUF1615) CIW72_03255 PF05230 MASE2 domain CIW72_03255 PF00990 Diguanylate cyclase, GGDEF domain CIW72_03280 PF00892 EamA-like transporter family CIW72_03285 PF00497 Bacterial extracellular solute-binding proteins, family 3 CIW72_03295 PF00324 Amino acid permease CIW72_03305 PF01544 CorA-like Mg2+ transporter protein CIW72_03315 PF01204 Trehalase CIW72_03360 PF08448 PAS fold CIW72_03360 PF08447 PAS fold CIW72_03360 PF00990 Diguanylate cyclase, GGDEF domain CIW72_03360 PF00563 EAL domain CIW72_03365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW72_03365 PF00672 HAMP domain CIW72_03365 PF02203 Tar ligand binding domain homologue CIW72_03370 PF00553 Cellulose binding domain CIW72_03370 PF00150 Cellulase (glycosyl hydrolase family 5) CIW72_03375 PF01740 STAS domain CIW72_03375 PF00916 Sulfate permease family CIW72_03380 PF00990 Diguanylate cyclase, GGDEF domain CIW72_03380 PF08448 PAS fold CIW72_03400 PF13632 Glycosyl transferase family group 2 CIW72_03410 PF07694 5TMR of 5TMR-LYT CIW72_03410 PF06580 Histidine kinase CIW72_03415 PF04397 LytTr DNA-binding domain CIW72_03415 PF00072 Response regulator receiver domain CIW72_03420 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CIW72_03420 PF03900 Porphobilinogen deaminase, C-terminal domain CIW72_03450 PF00326 Prolyl oligopeptidase family CIW72_03450 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CIW72_03460 PF00155 Aminotransferase class I and II CIW72_03465 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CIW72_03465 PF00326 Prolyl oligopeptidase family CIW72_03470 PF04304 Protein of unknown function (DUF454) CIW72_03480 PF01678 Diaminopimelate epimerase CIW72_03490 PF00589 Phage integrase family CIW72_03490 PF02899 Phage integrase, N-terminal SAM-like domain CIW72_03495 PF00227 Proteasome subunit CIW72_03500 PF10431 C-terminal, D2-small domain, of ClpB protein CIW72_03500 PF07724 AAA domain (Cdc48 subfamily) CIW72_03500 PF00004 ATPase family associated with various cellular activities (AAA) CIW72_03510 PF13673 Acetyltransferase (GNAT) domain CIW72_03515 PF13533 Biotin-lipoyl like CIW72_03525 PF01209 ubiE/COQ5 methyltransferase family CIW72_03530 PF17156 Gammaproteobacterial periplasmic sensor domain CIW72_03530 PF00990 Diguanylate cyclase, GGDEF domain CIW72_03535 PF11838 ERAP1-like C-terminal domain CIW72_03535 PF01433 Peptidase family M1 domain CIW72_03555 PF13360 PQQ-like domain CIW72_03560 PF00497 Bacterial extracellular solute-binding proteins, family 3 CIW72_03575 PF00107 Zinc-binding dehydrogenase CIW72_03575 PF08240 Alcohol dehydrogenase GroES-like domain CIW72_03585 PF02954 Bacterial regulatory protein, Fis family CIW72_03585 PF00158 Sigma-54 interaction domain CIW72_03585 PF01590 GAF domain CIW72_03590 PF00294 pfkB family carbohydrate kinase CIW72_03600 PF04085 rod shape-determining protein MreC CIW72_03610 PF03717 Penicillin-binding Protein dimerisation domain CIW72_03610 PF00905 Penicillin binding protein transpeptidase domain CIW72_03615 PF01098 Cell cycle protein CIW72_03620 PF00295 Glycosyl hydrolases family 28 CIW72_03625 PF13406 Transglycosylase SLT domain CIW72_03630 PF03330 Lytic transglycolase CIW72_03630 PF05036 Sporulation related domain CIW72_03640 PF07943 Penicillin-binding protein 5, C-terminal domain CIW72_03640 PF00768 D-alanyl-D-alanine carboxypeptidase CIW72_03650 PF04359 Protein of unknown function (DUF493) CIW72_03655 PF03099 Biotin/lipoate A/B protein ligase family CIW72_03660 PF04055 Radical SAM superfamily CIW72_03660 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CIW72_03665 PF17804 Tail specific protease N-terminal domain CIW72_03665 PF03572 Peptidase family S41 CIW72_03665 PF00595 PDZ domain CIW72_03665 PF11818 C-terminal domain of tail specific protease (DUF3340) CIW72_03675 PF03466 LysR substrate binding domain CIW72_03675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW72_03685 PF01467 Cytidylyltransferase-like CIW72_03685 PF00293 NUDIX domain CIW72_03720 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CIW72_03720 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CIW72_03725 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CIW72_03725 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CIW72_03730 PF04972 BON domain CIW72_03735 PF00360 Phytochrome region CIW72_03735 PF08446 PAS fold CIW72_03735 PF00512 His Kinase A (phospho-acceptor) domain CIW72_03735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_03735 PF01590 GAF domain CIW72_03740 PF00072 Response regulator receiver domain CIW72_03745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_03745 PF00512 His Kinase A (phospho-acceptor) domain CIW72_03750 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CIW72_03800 PF03958 Bacterial type II/III secretion system short domain CIW72_03800 PF00263 Bacterial type II and III secretion system protein CIW72_03805 PF00437 Type II/IV secretion system protein CIW72_03810 PF00482 Type II secretion system (T2SS), protein F CIW72_03815 PF08334 Type II secretion system (T2SS), protein G CIW72_03815 PF07963 Prokaryotic N-terminal methylation motif CIW72_03820 PF07963 Prokaryotic N-terminal methylation motif CIW72_03820 PF12019 Type II transport protein GspH CIW72_03825 PF02501 Type II secretion system (T2SS), protein I CIW72_03825 PF07963 Prokaryotic N-terminal methylation motif CIW72_03830 PF07963 Prokaryotic N-terminal methylation motif CIW72_03830 PF11612 Type II secretion system (T2SS), protein J CIW72_03835 PF03934 Type II secretion system (T2SS), protein K CIW72_03860 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 CIW72_03860 PF16355 Domain of unknown function (DUF4982) CIW72_03860 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CIW72_03860 PF02837 Glycosyl hydrolases family 2, sugar binding domain CIW72_03860 PF00703 Glycosyl hydrolases family 2 CIW72_03880 PF07690 Major Facilitator Superfamily CIW72_03885 PF00356 Bacterial regulatory proteins, lacI family CIW72_03890 PF01380 SIS domain CIW72_03895 PF01979 Amidohydrolase family CIW72_03905 PF01966 HD domain CIW72_03905 PF01743 Poly A polymerase head domain CIW72_03905 PF12627 Probable RNA and SrmB- binding site of polymerase A CIW72_03910 PF05199 GMC oxidoreductase CIW72_03910 PF00732 GMC oxidoreductase CIW72_03915 PF00171 Aldehyde dehydrogenase family CIW72_03920 PF02028 BCCT, betaine/carnitine/choline family transporter CIW72_03935 PF01323 DSBA-like thioredoxin domain CIW72_03945 PF00034 Cytochrome c CIW72_03950 PF01926 50S ribosome-binding GTPase CIW72_03955 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CIW72_03955 PF10996 Beta-Casp domain CIW72_03955 PF00753 Metallo-beta-lactamase superfamily CIW72_03970 PF04107 Glutamate-cysteine ligase family 2(GCS2) CIW72_03975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_03975 PF00672 HAMP domain CIW72_03975 PF00512 His Kinase A (phospho-acceptor) domain CIW72_03980 PF00486 Transcriptional regulatory protein, C terminal CIW72_03980 PF00072 Response regulator receiver domain CIW72_03995 PF02583 Metal-sensitive transcriptional repressor CIW72_04000 PF00107 Zinc-binding dehydrogenase CIW72_04000 PF08240 Alcohol dehydrogenase GroES-like domain CIW72_04005 PF04828 Glutathione-dependent formaldehyde-activating enzyme CIW72_04010 PF00756 Putative esterase CIW72_04020 PF00392 Bacterial regulatory proteins, gntR family CIW72_04020 PF00155 Aminotransferase class I and II CIW72_04025 PF02567 Phenazine biosynthesis-like protein CIW72_04030 PF00892 EamA-like transporter family CIW72_04040 PF12848 ABC transporter CIW72_04040 PF00005 ABC transporter CIW72_04050 PF00464 Serine hydroxymethyltransferase CIW72_04055 PF03477 ATP cone domain CIW72_04065 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CIW72_04065 PF01872 RibD C-terminal domain CIW72_04075 PF00677 Lumazine binding domain CIW72_04080 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CIW72_04080 PF00925 GTP cyclohydrolase II CIW72_04085 PF00885 6,7-dimethyl-8-ribityllumazine synthase CIW72_04090 PF01029 NusB family CIW72_04095 PF02769 AIR synthase related protein, C-terminal domain CIW72_04095 PF00586 AIR synthase related protein, N-terminal domain CIW72_04120 PF03814 Potassium-transporting ATPase A subunit CIW72_04130 PF02669 K+-transporting ATPase, c chain CIW72_04135 PF00512 His Kinase A (phospho-acceptor) domain CIW72_04135 PF02702 Osmosensitive K+ channel His kinase sensor domain CIW72_04135 PF13493 Domain of unknown function (DUF4118) CIW72_04135 PF13492 GAF domain CIW72_04135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_04140 PF00072 Response regulator receiver domain CIW72_04140 PF00486 Transcriptional regulatory protein, C terminal CIW72_04155 PF02913 FAD linked oxidases, C-terminal domain CIW72_04155 PF01565 FAD binding domain CIW72_04160 PF04307 LexA-binding, inner membrane-associated putative hydrolase CIW72_04165 PF02021 Uncharacterised protein family UPF0102 CIW72_04175 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CIW72_04200 PF02381 MraZ protein, putative antitoxin-like CIW72_04205 PF01795 MraW methylase family CIW72_04210 PF04999 Cell division protein FtsL CIW72_04215 PF00905 Penicillin binding protein transpeptidase domain CIW72_04215 PF03717 Penicillin-binding Protein dimerisation domain CIW72_04220 PF08245 Mur ligase middle domain CIW72_04220 PF01225 Mur ligase family, catalytic domain CIW72_04220 PF02875 Mur ligase family, glutamate ligase domain CIW72_04225 PF02875 Mur ligase family, glutamate ligase domain CIW72_04225 PF01225 Mur ligase family, catalytic domain CIW72_04225 PF08245 Mur ligase middle domain CIW72_04230 PF00953 Glycosyl transferase family 4 CIW72_04235 PF01098 Cell cycle protein CIW72_04240 PF03033 Glycosyltransferase family 28 N-terminal domain CIW72_04240 PF04101 Glycosyltransferase family 28 C-terminal domain CIW72_04245 PF01225 Mur ligase family, catalytic domain CIW72_04245 PF08245 Mur ligase middle domain CIW72_04245 PF02875 Mur ligase family, glutamate ligase domain CIW72_04250 PF01820 D-ala D-ala ligase N-terminus CIW72_04250 PF07478 D-ala D-ala ligase C-terminus CIW72_04255 PF03799 Cell division protein FtsQ CIW72_04255 PF08478 POTRA domain, FtsQ-type CIW72_04260 PF02491 SHS2 domain inserted in FTSA CIW72_04265 PF12327 FtsZ family, C-terminal domain CIW72_04265 PF00091 Tubulin/FtsZ family, GTPase domain CIW72_04270 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CIW72_04280 PF01476 LysM domain CIW72_04280 PF08525 Opacity-associated protein A N-terminal motif CIW72_04280 PF01551 Peptidase family M23 CIW72_04285 PF07516 SecA Wing and Scaffold domain CIW72_04285 PF02810 SEC-C motif CIW72_04285 PF07517 SecA DEAD-like domain CIW72_04285 PF01043 SecA preprotein cross-linking domain CIW72_04290 PF00293 NUDIX domain CIW72_04300 PF02219 Methylenetetrahydrofolate reductase CIW72_04315 PF16197 Ketoacyl-synthetase C-terminal extension CIW72_04315 PF14765 Polyketide synthase dehydratase CIW72_04315 PF00550 Phosphopantetheine attachment site CIW72_04315 PF02801 Beta-ketoacyl synthase, C-terminal domain CIW72_04315 PF08659 KR domain CIW72_04315 PF00107 Zinc-binding dehydrogenase CIW72_04315 PF00109 Beta-ketoacyl synthase, N-terminal domain CIW72_04315 PF08240 Alcohol dehydrogenase GroES-like domain CIW72_04315 PF00698 Acyl transferase domain CIW72_04320 PF09286 Pro-kumamolisin, activation domain CIW72_04320 PF00082 Subtilase family CIW72_04335 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CIW72_04340 PF00128 Alpha amylase, catalytic domain CIW72_04370 PF13649 Methyltransferase domain CIW72_04375 PF05221 S-adenosyl-L-homocysteine hydrolase CIW72_04375 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CIW72_04385 PF00311 Phosphoenolpyruvate carboxylase CIW72_04420 PF00328 Histidine phosphatase superfamily (branch 2) CIW72_04425 PF00438 S-adenosylmethionine synthetase, N-terminal domain CIW72_04425 PF02772 S-adenosylmethionine synthetase, central domain CIW72_04425 PF02773 S-adenosylmethionine synthetase, C-terminal domain CIW72_04435 PF13649 Methyltransferase domain CIW72_04440 PF01207 Dihydrouridine synthase (Dus) CIW72_04450 PF00294 pfkB family carbohydrate kinase CIW72_04455 PF07670 Nucleoside recognition CIW72_04455 PF07662 Na+ dependent nucleoside transporter C-terminus CIW72_04455 PF01773 Na+ dependent nucleoside transporter N-terminus CIW72_04465 PF00248 Aldo/keto reductase family CIW72_04475 PF07715 TonB-dependent Receptor Plug Domain CIW72_04475 PF00593 TonB dependent receptor CIW72_04495 PF00528 Binding-protein-dependent transport system inner membrane component CIW72_04500 PF00005 ABC transporter CIW72_04510 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CIW72_04520 PF00005 ABC transporter CIW72_04525 PF13472 GDSL-like Lipase/Acylhydrolase family CIW72_04530 PF00072 Response regulator receiver domain CIW72_04530 PF00486 Transcriptional regulatory protein, C terminal CIW72_04535 PF00512 His Kinase A (phospho-acceptor) domain CIW72_04535 PF08521 Two-component sensor kinase N-terminal CIW72_04535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_04550 PF01219 Prokaryotic diacylglycerol kinase CIW72_04570 PF01790 Prolipoprotein diacylglyceryl transferase CIW72_04575 PF00303 Thymidylate synthase CIW72_04585 PF00186 Dihydrofolate reductase CIW72_04590 PF00158 Sigma-54 interaction domain CIW72_04595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CIW72_04595 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CIW72_04600 PF00005 ABC transporter CIW72_04605 PF00528 Binding-protein-dependent transport system inner membrane component CIW72_04615 PF00296 Luciferase-like monooxygenase CIW72_04620 PF03358 NADPH-dependent FMN reductase CIW72_04640 PF00296 Luciferase-like monooxygenase CIW72_04645 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CIW72_04650 PF00528 Binding-protein-dependent transport system inner membrane component CIW72_04655 PF00528 Binding-protein-dependent transport system inner membrane component CIW72_04655 PF12911 N-terminal TM domain of oligopeptide transport permease C CIW72_04665 PF00149 Calcineurin-like phosphoesterase CIW72_04670 PF04379 ApaG domain CIW72_04675 PF00398 Ribosomal RNA adenine dimethylase CIW72_04680 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CIW72_04685 PF00639 PPIC-type PPIASE domain CIW72_04685 PF09312 SurA N-terminal domain CIW72_04690 PF04453 LPS transport system D CIW72_04690 PF03968 OstA-like protein CIW72_04705 PF00850 Histone deacetylase domain CIW72_04710 PF01923 Cobalamin adenosyltransferase CIW72_04725 PF01494 FAD binding domain CIW72_04730 PF01494 FAD binding domain CIW72_04755 PF07729 FCD domain CIW72_04755 PF00392 Bacterial regulatory proteins, gntR family CIW72_04760 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CIW72_04765 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CIW72_04765 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit CIW72_04770 PF03466 LysR substrate binding domain CIW72_04770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW72_04775 PF00501 AMP-binding enzyme CIW72_04775 PF13193 AMP-binding enzyme C-terminal domain CIW72_04785 PF00378 Enoyl-CoA hydratase/isomerase CIW72_04805 PF08450 SMP-30/Gluconolactonase/LRE-like region CIW72_04810 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CIW72_04810 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CIW72_04845 PF00892 EamA-like transporter family CIW72_04855 PF00749 tRNA synthetases class I (E and Q), catalytic domain CIW72_04855 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CIW72_04870 PF00072 Response regulator receiver domain CIW72_04870 PF00990 Diguanylate cyclase, GGDEF domain CIW72_04875 PF00512 His Kinase A (phospho-acceptor) domain CIW72_04875 PF00072 Response regulator receiver domain CIW72_04875 PF01627 Hpt domain CIW72_04875 PF17149 Periplasmic sensor domain found in signal transduction proteins CIW72_04875 PF00672 HAMP domain CIW72_04875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_04880 PF00072 Response regulator receiver domain CIW72_04880 PF00196 Bacterial regulatory proteins, luxR family CIW72_04890 PF01625 Peptide methionine sulfoxide reductase CIW72_04900 PF00923 Transaldolase/Fructose-6-phosphate aldolase CIW72_04905 PF01272 Transcription elongation factor, GreA/GreB, C-term CIW72_04905 PF14760 Rnk N-terminus CIW72_04915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW72_04915 PF03466 LysR substrate binding domain CIW72_04920 PF13192 Thioredoxin domain CIW72_04920 PF07992 Pyridine nucleotide-disulphide oxidoreductase CIW72_04925 PF10417 C-terminal domain of 1-Cys peroxiredoxin CIW72_04925 PF00578 AhpC/TSA family CIW72_04930 PF17827 PrmC N-terminal domain CIW72_04930 PF05175 Methyltransferase small domain CIW72_04935 PF00561 alpha/beta hydrolase fold CIW72_04945 PF00293 NUDIX domain CIW72_04950 PF01612 3'-5' exonuclease CIW72_04950 PF00476 DNA polymerase family A CIW72_04950 PF01367 5'-3' exonuclease, C-terminal SAM fold CIW72_04950 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CIW72_04980 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CIW72_04980 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CIW72_04980 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CIW72_05000 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CIW72_05005 PF02233 NAD(P) transhydrogenase beta subunit CIW72_05020 PF01063 Amino-transferase class IV CIW72_05035 PF04151 Bacterial pre-peptidase C-terminal domain CIW72_05035 PF00082 Subtilase family CIW72_05040 PF04073 Aminoacyl-tRNA editing domain CIW72_05050 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain CIW72_05050 PF17189 Glycosyl hydrolase family 30 beta sandwich domain CIW72_05060 PF03358 NADPH-dependent FMN reductase CIW72_05065 PF03631 Virulence factor BrkB CIW72_05070 PF08534 Redoxin CIW72_05075 PF00708 Acylphosphatase CIW72_05085 PF03976 Polyphosphate kinase 2 (PPK2) CIW72_05090 PF00994 Probable molybdopterin binding domain CIW72_05100 PF03462 PCRF domain CIW72_05100 PF00472 RF-1 domain CIW72_05105 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CIW72_05105 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CIW72_05105 PF01488 Shikimate / quinate 5-dehydrogenase CIW72_05115 PF03550 Outer membrane lipoprotein LolB CIW72_05120 PF08544 GHMP kinases C terminal CIW72_05120 PF00288 GHMP kinases N terminal domain CIW72_05130 PF14572 Phosphoribosyl synthetase-associated domain CIW72_05130 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CIW72_05135 PF01386 Ribosomal L25p family CIW72_05135 PF14693 Ribosomal protein TL5, C-terminal domain CIW72_05140 PF01195 Peptidyl-tRNA hydrolase CIW72_05145 PF06071 Protein of unknown function (DUF933) CIW72_05145 PF01926 50S ribosome-binding GTPase CIW72_05165 PF03143 Elongation factor Tu C-terminal domain CIW72_05165 PF03144 Elongation factor Tu domain 2 CIW72_05165 PF00009 Elongation factor Tu GTP binding domain CIW72_05175 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CIW72_05180 PF00467 KOW motif CIW72_05180 PF02357 Transcription termination factor nusG CIW72_05185 PF00298 Ribosomal protein L11, RNA binding domain CIW72_05185 PF03946 Ribosomal protein L11, N-terminal domain CIW72_05190 PF00687 Ribosomal protein L1p/L10e family CIW72_05195 PF00466 Ribosomal protein L10 CIW72_05200 PF00542 Ribosomal protein L7/L12 C-terminal domain CIW72_05200 PF16320 Ribosomal protein L7/L12 dimerisation domain CIW72_05205 PF04561 RNA polymerase Rpb2, domain 2 CIW72_05205 PF04565 RNA polymerase Rpb2, domain 3 CIW72_05205 PF10385 RNA polymerase beta subunit external 1 domain CIW72_05205 PF04560 RNA polymerase Rpb2, domain 7 CIW72_05205 PF00562 RNA polymerase Rpb2, domain 6 CIW72_05205 PF04563 RNA polymerase beta subunit CIW72_05210 PF04998 RNA polymerase Rpb1, domain 5 CIW72_05210 PF05000 RNA polymerase Rpb1, domain 4 CIW72_05210 PF04983 RNA polymerase Rpb1, domain 3 CIW72_05210 PF00623 RNA polymerase Rpb1, domain 2 CIW72_05210 PF04997 RNA polymerase Rpb1, domain 1 CIW72_05215 PF00164 Ribosomal protein S12/S23 CIW72_05220 PF00177 Ribosomal protein S7p/S5e CIW72_05225 PF00009 Elongation factor Tu GTP binding domain CIW72_05225 PF03764 Elongation factor G, domain IV CIW72_05225 PF14492 Elongation Factor G, domain II CIW72_05225 PF00679 Elongation factor G C-terminus CIW72_05225 PF03144 Elongation factor Tu domain 2 CIW72_05230 PF00009 Elongation factor Tu GTP binding domain CIW72_05230 PF03143 Elongation factor Tu C-terminal domain CIW72_05230 PF03144 Elongation factor Tu domain 2 CIW72_05235 PF00338 Ribosomal protein S10p/S20e CIW72_05240 PF00297 Ribosomal protein L3 CIW72_05245 PF00573 Ribosomal protein L4/L1 family CIW72_05250 PF00276 Ribosomal protein L23 CIW72_05255 PF03947 Ribosomal Proteins L2, C-terminal domain CIW72_05255 PF00181 Ribosomal Proteins L2, RNA binding domain CIW72_05260 PF00203 Ribosomal protein S19 CIW72_05265 PF00237 Ribosomal protein L22p/L17e CIW72_05270 PF00189 Ribosomal protein S3, C-terminal domain CIW72_05270 PF07650 KH domain CIW72_05275 PF00252 Ribosomal protein L16p/L10e CIW72_05280 PF00831 Ribosomal L29 protein CIW72_05285 PF00366 Ribosomal protein S17 CIW72_05290 PF00238 Ribosomal protein L14p/L23e CIW72_05295 PF00467 KOW motif CIW72_05295 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CIW72_05300 PF00281 Ribosomal protein L5 CIW72_05300 PF00673 ribosomal L5P family C-terminus CIW72_05305 PF00253 Ribosomal protein S14p/S29e CIW72_05310 PF00410 Ribosomal protein S8 CIW72_05315 PF00347 Ribosomal protein L6 CIW72_05320 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CIW72_05325 PF03719 Ribosomal protein S5, C-terminal domain CIW72_05325 PF00333 Ribosomal protein S5, N-terminal domain CIW72_05330 PF00327 Ribosomal protein L30p/L7e CIW72_05335 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CIW72_05340 PF00344 SecY translocase CIW72_05345 PF00416 Ribosomal protein S13/S18 CIW72_05350 PF00411 Ribosomal protein S11 CIW72_05355 PF01479 S4 domain CIW72_05355 PF00163 Ribosomal protein S4/S9 N-terminal domain CIW72_05360 PF01000 RNA polymerase Rpb3/RpoA insert domain CIW72_05360 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CIW72_05360 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CIW72_05365 PF01196 Ribosomal protein L17 CIW72_05370 PF02600 Disulfide bond formation protein DsbB CIW72_05390 PF01474 Class-II DAHP synthetase family CIW72_05400 PF01425 Amidase CIW72_05415 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CIW72_05420 PF00056 lactate/malate dehydrogenase, NAD binding domain CIW72_05420 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CIW72_05455 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CIW72_05455 PF07992 Pyridine nucleotide-disulphide oxidoreductase CIW72_05460 PF08240 Alcohol dehydrogenase GroES-like domain CIW72_05460 PF00107 Zinc-binding dehydrogenase CIW72_05470 PF05736 OprF membrane domain CIW72_05470 PF00691 OmpA family CIW72_05480 PF00849 RNA pseudouridylate synthase CIW72_05490 PF00155 Aminotransferase class I and II CIW72_05500 PF00528 Binding-protein-dependent transport system inner membrane component CIW72_05505 PF00528 Binding-protein-dependent transport system inner membrane component CIW72_05510 PF12857 TOBE-like domain CIW72_05510 PF00005 ABC transporter CIW72_05510 PF17850 CysA C-terminal regulatory domain CIW72_05520 PF00107 Zinc-binding dehydrogenase CIW72_05520 PF08240 Alcohol dehydrogenase GroES-like domain CIW72_05535 PF04185 Phosphoesterase family CIW72_05535 PF05506 Domain of unknown function (DUF756) CIW72_05545 PF10459 Peptidase S46 CIW72_05550 PF00300 Histidine phosphatase superfamily (branch 1) CIW72_05555 PF08245 Mur ligase middle domain CIW72_05555 PF02875 Mur ligase family, glutamate ligase domain CIW72_05570 PF00156 Phosphoribosyl transferase domain CIW72_05575 PF04305 Protein of unknown function (DUF455) CIW72_05595 PF00149 Calcineurin-like phosphoesterase CIW72_05600 PF01569 PAP2 superfamily CIW72_05605 PF00534 Glycosyl transferases group 1 CIW72_05605 PF13439 Glycosyltransferase Family 4 CIW72_05610 PF02541 Ppx/GppA phosphatase family CIW72_05615 PF02503 Polyphosphate kinase middle domain CIW72_05615 PF17941 Polyphosphate kinase C-terminal domain 1 CIW72_05615 PF13090 Polyphosphate kinase C-terminal domain 2 CIW72_05615 PF13089 Polyphosphate kinase N-terminal domain CIW72_05620 PF00512 His Kinase A (phospho-acceptor) domain CIW72_05620 PF00989 PAS fold CIW72_05620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_05620 PF11808 Phosphate regulon sensor protein PhoR CIW72_05625 PF00486 Transcriptional regulatory protein, C terminal CIW72_05625 PF00072 Response regulator receiver domain CIW72_05630 PF01435 Peptidase family M48 CIW72_05630 PF13181 Tetratricopeptide repeat CIW72_05635 PF00462 Glutaredoxin CIW72_05645 PF00180 Isocitrate/isopropylmalate dehydrogenase CIW72_05715 PF00182 Chitinase class I CIW72_05770 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CIW72_05770 PF00128 Alpha amylase, catalytic domain CIW72_05775 PF18030 RimK PreATP-grasp domain CIW72_05775 PF08443 RimK-like ATP-grasp domain CIW72_05785 PF00486 Transcriptional regulatory protein, C terminal CIW72_05785 PF00072 Response regulator receiver domain CIW72_05790 PF00512 His Kinase A (phospho-acceptor) domain CIW72_05790 PF16736 Single Cache-like CIW72_05790 PF00989 PAS fold CIW72_05790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_05820 PF01121 Dephospho-CoA kinase CIW72_05825 PF01478 Type IV leader peptidase family CIW72_05825 PF06750 Bacterial Peptidase A24 N-terminal domain CIW72_05845 PF00893 Small Multidrug Resistance protein CIW72_05865 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CIW72_05865 PF00437 Type II/IV secretion system protein CIW72_05870 PF00437 Type II/IV secretion system protein CIW72_05870 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CIW72_05875 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CIW72_05875 PF00437 Type II/IV secretion system protein CIW72_05880 PF00072 Response regulator receiver domain CIW72_05880 PF02954 Bacterial regulatory protein, Fis family CIW72_05880 PF00158 Sigma-54 interaction domain CIW72_05885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_05885 PF00512 His Kinase A (phospho-acceptor) domain CIW72_05890 PF00549 CoA-ligase CIW72_05890 PF08442 ATP-grasp domain CIW72_05895 PF02629 CoA binding domain CIW72_05895 PF00549 CoA-ligase CIW72_05910 PF00795 Carbon-nitrogen hydrolase CIW72_05910 PF02540 NAD synthase CIW72_05920 PF13525 Outer membrane lipoprotein CIW72_05925 PF00849 RNA pseudouridylate synthase CIW72_05940 PF04134 Protein of unknown function, DUF393 CIW72_05945 PF00672 HAMP domain CIW72_05945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW72_05945 PF02203 Tar ligand binding domain homologue CIW72_05955 PF01011 PQQ enzyme repeat CIW72_05960 PF00982 Glycosyltransferase family 20 CIW72_05965 PF00723 Glycosyl hydrolases family 15 CIW72_05970 PF02358 Trehalose-phosphatase CIW72_05975 PF07715 TonB-dependent Receptor Plug Domain CIW72_05975 PF00593 TonB dependent receptor CIW72_06010 PF01541 GIY-YIG catalytic domain CIW72_06015 PF07715 TonB-dependent Receptor Plug Domain CIW72_06015 PF00593 TonB dependent receptor CIW72_06040 PF00528 Binding-protein-dependent transport system inner membrane component CIW72_06045 PF00005 ABC transporter CIW72_06050 PF07724 AAA domain (Cdc48 subfamily) CIW72_06050 PF17871 AAA lid domain CIW72_06050 PF02861 Clp amino terminal domain, pathogenicity island component CIW72_06050 PF10431 C-terminal, D2-small domain, of ClpB protein CIW72_06050 PF00004 ATPase family associated with various cellular activities (AAA) CIW72_06055 PF00593 TonB dependent receptor CIW72_06055 PF07715 TonB-dependent Receptor Plug Domain CIW72_06070 PF12557 Cob(I)alamin adenosyltransferase N terminal CIW72_06070 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CIW72_06075 PF17113 Regulatory signalling modulator protein AmpE CIW72_06075 PF03186 CobD/Cbib protein CIW72_06080 PF00155 Aminotransferase class I and II CIW72_06085 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CIW72_06085 PF07685 CobB/CobQ-like glutamine amidotransferase domain CIW72_06090 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CIW72_06095 PF02277 Phosphoribosyltransferase CIW72_06105 PF02654 Cobalamin-5-phosphate synthase CIW72_06115 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CIW72_06115 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CIW72_06125 PF07690 Major Facilitator Superfamily CIW72_06130 PF06276 Ferric iron reductase FhuF-like transporter CIW72_06130 PF04183 IucA / IucC family CIW72_06140 PF07715 TonB-dependent Receptor Plug Domain CIW72_06140 PF00593 TonB dependent receptor CIW72_06140 PF07660 Secretin and TonB N terminus short domain CIW72_06165 PF02254 TrkA-N domain CIW72_06165 PF00999 Sodium/hydrogen exchanger family CIW72_06175 PF00067 Cytochrome P450 CIW72_06180 PF07715 TonB-dependent Receptor Plug Domain CIW72_06180 PF00593 TonB dependent receptor CIW72_06185 PF07715 TonB-dependent Receptor Plug Domain CIW72_06185 PF00593 TonB dependent receptor CIW72_06200 PF07715 TonB-dependent Receptor Plug Domain CIW72_06200 PF00593 TonB dependent receptor CIW72_06205 PF00005 ABC transporter CIW72_06205 PF12848 ABC transporter CIW72_06215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW72_06215 PF03466 LysR substrate binding domain CIW72_06235 PF04185 Phosphoesterase family CIW72_06235 PF05506 Domain of unknown function (DUF756) CIW72_06250 PF07690 Major Facilitator Superfamily CIW72_06265 PF02938 GAD domain CIW72_06265 PF00152 tRNA synthetases class II (D, K and N) CIW72_06265 PF01336 OB-fold nucleic acid binding domain CIW72_06280 PF01709 Transcriptional regulator CIW72_06285 PF02075 Crossover junction endodeoxyribonuclease RuvC CIW72_06290 PF07499 RuvA, C-terminal domain CIW72_06290 PF01330 RuvA N terminal domain CIW72_06295 PF02705 K+ potassium transporter CIW72_06305 PF17864 RuvB AAA lid domain CIW72_06305 PF05496 Holliday junction DNA helicase RuvB P-loop domain CIW72_06305 PF05491 RuvB C-terminal winged helix domain CIW72_06310 PF03061 Thioesterase superfamily CIW72_06315 PF01618 MotA/TolQ/ExbB proton channel family CIW72_06320 PF02472 Biopolymer transport protein ExbD/TolR CIW72_06330 PF04052 TolB amino-terminal domain CIW72_06330 PF07676 WD40-like Beta Propeller Repeat CIW72_06335 PF00691 OmpA family CIW72_06345 PF04055 Radical SAM superfamily CIW72_06355 PF06508 Queuosine biosynthesis protein QueC CIW72_06360 PF13426 PAS domain CIW72_06360 PF07536 HWE histidine kinase CIW72_06360 PF13581 Histidine kinase-like ATPase domain CIW72_06380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW72_06380 PF00672 HAMP domain CIW72_06380 PF02203 Tar ligand binding domain homologue CIW72_06415 PF09382 RQC domain CIW72_06415 PF16124 RecQ zinc-binding CIW72_06415 PF00570 HRDC domain CIW72_06415 PF00271 Helicase conserved C-terminal domain CIW72_06415 PF00270 DEAD/DEAH box helicase CIW72_06425 PF00210 Ferritin-like domain CIW72_06430 PF00270 DEAD/DEAH box helicase CIW72_06430 PF11898 Domain of unknown function (DUF3418) CIW72_06430 PF04408 Helicase associated domain (HA2) CIW72_06430 PF00271 Helicase conserved C-terminal domain CIW72_06430 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CIW72_06445 PF02685 Glucokinase CIW72_06460 PF04055 Radical SAM superfamily CIW72_06460 PF13186 Iron-sulfur cluster-binding domain CIW72_06465 PF05402 Coenzyme PQQ synthesis protein D (PqqD) CIW72_06470 PF03070 TENA/THI-4/PQQC family CIW72_06475 PF12706 Beta-lactamase superfamily domain CIW72_06480 PF08042 PqqA family CIW72_06485 PF02824 TGS domain CIW72_06485 PF04607 Region found in RelA / SpoT proteins CIW72_06485 PF13291 ACT domain CIW72_06500 PF00535 Glycosyl transferase family 2 CIW72_06505 PF00912 Transglycosylase CIW72_06505 PF14814 Bifunctional transglycosylase second domain CIW72_06505 PF00905 Penicillin binding protein transpeptidase domain CIW72_06515 PF13307 Helicase C-terminal domain CIW72_06515 PF04851 Type III restriction enzyme, res subunit CIW72_06520 PF00814 Glycoprotease family CIW72_06525 PF03747 ADP-ribosylglycohydrolase CIW72_06535 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CIW72_06535 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CIW72_06540 PF00072 Response regulator receiver domain CIW72_06545 PF00072 Response regulator receiver domain CIW72_06550 PF01584 CheW-like domain CIW72_06555 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CIW72_06555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW72_06560 PF00072 Response regulator receiver domain CIW72_06560 PF01627 Hpt domain CIW72_06560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_06560 PF01584 CheW-like domain CIW72_06575 PF13302 Acetyltransferase (GNAT) domain CIW72_06595 PF01112 Asparaginase CIW72_06600 PF03932 CutC family CIW72_06635 PF01301 Glycosyl hydrolases family 35 CIW72_06640 PF07971 Glycosyl hydrolase family 92 CIW72_06640 PF17678 Glycosyl hydrolase family 92 N-terminal domain CIW72_06670 PF01915 Glycosyl hydrolase family 3 C-terminal domain CIW72_06670 PF07691 PA14 domain CIW72_06670 PF00933 Glycosyl hydrolase family 3 N terminal domain CIW72_06670 PF14310 Fibronectin type III-like domain CIW72_06685 PF01476 LysM domain CIW72_06685 PF00704 Glycosyl hydrolases family 18 CIW72_06700 PF02685 Glucokinase CIW72_06705 PF04452 RNA methyltransferase CIW72_06710 PF00202 Aminotransferase class-III CIW72_06715 PF00293 NUDIX domain CIW72_06720 PF00459 Inositol monophosphatase family CIW72_06725 PF03819 MazG nucleotide pyrophosphohydrolase domain CIW72_06730 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CIW72_06745 PF01571 Aminomethyltransferase folate-binding domain CIW72_06745 PF08669 Glycine cleavage T-protein C-terminal barrel domain CIW72_06750 PF01597 Glycine cleavage H-protein CIW72_06775 PF09317 Domain of unknown function (DUF1974) CIW72_06775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CIW72_06775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CIW72_06780 PF00561 alpha/beta hydrolase fold CIW72_06785 PF00440 Bacterial regulatory proteins, tetR family CIW72_06805 PF07715 TonB-dependent Receptor Plug Domain CIW72_06805 PF00593 TonB dependent receptor CIW72_06815 PF01430 Hsp33 protein CIW72_06820 PF00912 Transglycosylase CIW72_06825 PF00535 Glycosyl transferase family 2 CIW72_06830 PF00478 IMP dehydrogenase / GMP reductase domain CIW72_06830 PF00571 CBS domain CIW72_06835 PF05170 AsmA family CIW72_06840 PF03006 Haemolysin-III related CIW72_06845 PF16658 Class II release factor RF3, C-terminal domain CIW72_06845 PF00009 Elongation factor Tu GTP binding domain CIW72_06850 PF01476 LysM domain CIW72_06850 PF08525 Opacity-associated protein A N-terminal motif CIW72_06850 PF01551 Peptidase family M23 CIW72_06855 PF00561 alpha/beta hydrolase fold CIW72_06860 PF01053 Cys/Met metabolism PLP-dependent enzyme CIW72_06865 PF00696 Amino acid kinase family CIW72_06865 PF03447 Homoserine dehydrogenase, NAD binding domain CIW72_06865 PF00742 Homoserine dehydrogenase CIW72_06875 PF00561 alpha/beta hydrolase fold CIW72_06880 PF03315 Serine dehydratase beta chain CIW72_06880 PF03313 Serine dehydratase alpha chain CIW72_06900 PF04264 YceI-like domain CIW72_06905 PF01627 Hpt domain CIW72_06905 PF00512 His Kinase A (phospho-acceptor) domain CIW72_06905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_06905 PF00072 Response regulator receiver domain CIW72_06915 PF00512 His Kinase A (phospho-acceptor) domain CIW72_06915 PF00672 HAMP domain CIW72_06915 PF00072 Response regulator receiver domain CIW72_06915 PF17149 Periplasmic sensor domain found in signal transduction proteins CIW72_06915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_06915 PF01627 Hpt domain CIW72_06920 PF00072 Response regulator receiver domain CIW72_06920 PF17149 Periplasmic sensor domain found in signal transduction proteins CIW72_06920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_06920 PF00512 His Kinase A (phospho-acceptor) domain CIW72_06920 PF01627 Hpt domain CIW72_06920 PF00672 HAMP domain CIW72_06925 PF07690 Major Facilitator Superfamily CIW72_06930 PF01208 Uroporphyrinogen decarboxylase (URO-D) CIW72_06940 PF01761 3-dehydroquinate synthase CIW72_06945 PF01202 Shikimate kinase CIW72_06950 PF01243 Pyridoxamine 5'-phosphate oxidase CIW72_06950 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CIW72_06960 PF04012 PspA/IM30 family CIW72_06985 PF03738 Glutathionylspermidine synthase preATP-grasp CIW72_06995 PF07690 Major Facilitator Superfamily CIW72_07000 PF00376 MerR family regulatory protein CIW72_07000 PF09278 MerR, DNA binding CIW72_07030 PF04820 Tryptophan halogenase CIW72_07035 PF12706 Beta-lactamase superfamily domain CIW72_07075 PF00324 Amino acid permease CIW72_07080 PF00196 Bacterial regulatory proteins, luxR family CIW72_07090 PF00561 alpha/beta hydrolase fold CIW72_07100 PF00544 Pectate lyase CIW72_07110 PF00324 Amino acid permease CIW72_07120 PF01654 Cytochrome bd terminal oxidase subunit I CIW72_07125 PF02322 Cytochrome bd terminal oxidase subunit II CIW72_07135 PF00756 Putative esterase CIW72_07140 PF01769 Divalent cation transporter CIW72_07140 PF00571 CBS domain CIW72_07140 PF03448 MgtE intracellular N domain CIW72_07150 PF05524 PEP-utilising enzyme, N-terminal CIW72_07150 PF00391 PEP-utilising enzyme, mobile domain CIW72_07150 PF02896 PEP-utilising enzyme, TIM barrel domain CIW72_07155 PF00381 PTS HPr component phosphorylation site CIW72_07165 PF03668 P-loop ATPase protein family CIW72_07170 PF07475 HPr Serine kinase C-terminal domain CIW72_07170 PF02603 HPr Serine kinase N terminus CIW72_07175 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CIW72_07180 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CIW72_07185 PF04963 Sigma-54 factor, core binding domain CIW72_07185 PF00309 Sigma-54 factor, Activator interacting domain (AID) CIW72_07185 PF04552 Sigma-54, DNA binding domain CIW72_07190 PF00005 ABC transporter CIW72_07195 PF03968 OstA-like protein CIW72_07210 PF00571 CBS domain CIW72_07210 PF01380 SIS domain CIW72_07215 PF01722 BolA-like protein CIW72_07220 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CIW72_07240 PF00551 Formyl transferase CIW72_07255 PF02769 AIR synthase related protein, C-terminal domain CIW72_07255 PF00586 AIR synthase related protein, N-terminal domain CIW72_07265 PF01594 AI-2E family transporter CIW72_07270 PF00308 Bacterial dnaA protein CIW72_07275 PF00483 Nucleotidyl transferase CIW72_07280 PF01636 Phosphotransferase enzyme family CIW72_07310 PF00258 Flavodoxin CIW72_07310 PF00667 FAD binding domain CIW72_07310 PF00175 Oxidoreductase NAD-binding domain CIW72_07315 PF02424 ApbE family CIW72_07340 PF18331 PKHD-type hydroxylase C-terminal domain CIW72_07340 PF13640 2OG-Fe(II) oxygenase superfamily CIW72_07345 PF07715 TonB-dependent Receptor Plug Domain CIW72_07345 PF00593 TonB dependent receptor CIW72_07350 PF00355 Rieske [2Fe-2S] domain CIW72_07360 PF00266 Aminotransferase class-V CIW72_07365 PF01458 Uncharacterized protein family (UPF0051) CIW72_07370 PF00005 ABC transporter CIW72_07375 PF01458 Uncharacterized protein family (UPF0051) CIW72_07380 PF02082 Transcriptional regulator CIW72_07390 PF01965 DJ-1/PfpI family CIW72_07410 PF01551 Peptidase family M23 CIW72_07420 PF14748 Pyrroline-5-carboxylate reductase dimerisation CIW72_07420 PF03807 NADP oxidoreductase coenzyme F420-dependent CIW72_07425 PF01168 Alanine racemase, N-terminal domain CIW72_07430 PF00437 Type II/IV secretion system protein CIW72_07435 PF00437 Type II/IV secretion system protein CIW72_07460 PF02622 Uncharacterized ACR, COG1678 CIW72_07465 PF03652 Holliday junction resolvase CIW72_07470 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CIW72_07470 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CIW72_07475 PF02566 OsmC-like protein CIW72_07485 PF02567 Phenazine biosynthesis-like protein CIW72_07490 PF02567 Phenazine biosynthesis-like protein CIW72_07495 PF01842 ACT domain CIW72_07495 PF00696 Amino acid kinase family CIW72_07510 PF08245 Mur ligase middle domain CIW72_07510 PF02875 Mur ligase family, glutamate ligase domain CIW72_07525 PF00348 Polyprenyl synthetase CIW72_07530 PF00436 Single-strand binding protein family CIW72_07535 PF00563 EAL domain CIW72_07535 PF00360 Phytochrome region CIW72_07535 PF00990 Diguanylate cyclase, GGDEF domain CIW72_07535 PF01590 GAF domain CIW72_07540 PF02801 Beta-ketoacyl synthase, C-terminal domain CIW72_07540 PF00698 Acyl transferase domain CIW72_07540 PF00550 Phosphopantetheine attachment site CIW72_07540 PF16197 Ketoacyl-synthetase C-terminal extension CIW72_07540 PF00107 Zinc-binding dehydrogenase CIW72_07540 PF00109 Beta-ketoacyl synthase, N-terminal domain CIW72_07540 PF08659 KR domain CIW72_07540 PF14765 Polyketide synthase dehydratase CIW72_07540 PF08240 Alcohol dehydrogenase GroES-like domain CIW72_07545 PF00111 2Fe-2S iron-sulfur cluster binding domain CIW72_07545 PF10518 TAT (twin-arginine translocation) pathway signal sequence CIW72_07545 PF01799 [2Fe-2S] binding domain CIW72_07550 PF03450 CO dehydrogenase flavoprotein C-terminal domain CIW72_07550 PF00941 FAD binding domain in molybdopterin dehydrogenase CIW72_07555 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CIW72_07555 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CIW72_07560 PF02625 XdhC and CoxI family CIW72_07560 PF13478 XdhC Rossmann domain CIW72_07605 PF04328 Selenoprotein, putative CIW72_07610 PF02554 Carbon starvation protein CstA CIW72_07610 PF13722 5TM C-terminal transporter carbon starvation CstA CIW72_07615 PF05726 Pirin C-terminal cupin domain CIW72_07615 PF02678 Pirin CIW72_07630 PF02678 Pirin CIW72_07630 PF05726 Pirin C-terminal cupin domain CIW72_07640 PF04493 Endonuclease V CIW72_07645 PF00300 Histidine phosphatase superfamily (branch 1) CIW72_07660 PF13091 PLD-like domain CIW72_07665 PF01339 CheB methylesterase CIW72_07665 PF00072 Response regulator receiver domain CIW72_07670 PF01739 CheR methyltransferase, SAM binding domain CIW72_07670 PF03705 CheR methyltransferase, all-alpha domain CIW72_07675 PF00563 EAL domain CIW72_07675 PF00990 Diguanylate cyclase, GGDEF domain CIW72_07675 PF13426 PAS domain CIW72_07680 PF01584 CheW-like domain CIW72_07685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW72_07685 PF02203 Tar ligand binding domain homologue CIW72_07685 PF00672 HAMP domain CIW72_07690 PF02895 Signal transducing histidine kinase, homodimeric domain CIW72_07690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_07690 PF01627 Hpt domain CIW72_07690 PF01584 CheW-like domain CIW72_07690 PF09078 CheY binding CIW72_07735 PF00271 Helicase conserved C-terminal domain CIW72_07735 PF17757 UvrB interaction domain CIW72_07735 PF00270 DEAD/DEAH box helicase CIW72_07735 PF02559 CarD-like/TRCF domain CIW72_07735 PF03461 TRCF domain CIW72_07745 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CIW72_07750 PF00072 Response regulator receiver domain CIW72_07750 PF00486 Transcriptional regulatory protein, C terminal CIW72_07755 PF00672 HAMP domain CIW72_07755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_07755 PF00512 His Kinase A (phospho-acceptor) domain CIW72_07765 PF06123 Inner membrane protein CreD CIW72_07790 PF00749 tRNA synthetases class I (E and Q), catalytic domain CIW72_07795 PF01475 Ferric uptake regulator family CIW72_07805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CIW72_07805 PF00529 HlyD membrane-fusion protein of T1SS CIW72_07810 PF00873 AcrB/AcrD/AcrF family CIW72_07815 PF02321 Outer membrane efflux protein CIW72_07820 PF16859 Tetracyclin repressor-like, C-terminal domain CIW72_07820 PF00440 Bacterial regulatory proteins, tetR family CIW72_07825 PF00248 Aldo/keto reductase family CIW72_07830 PF03466 LysR substrate binding domain CIW72_07830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW72_07840 PF06719 AraC-type transcriptional regulator N-terminus CIW72_07840 PF12833 Helix-turn-helix domain CIW72_07850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW72_07850 PF03466 LysR substrate binding domain CIW72_07855 PF07690 Major Facilitator Superfamily CIW72_07870 PF01483 Proprotein convertase P-domain CIW72_07870 PF00082 Subtilase family CIW72_07890 PF07715 TonB-dependent Receptor Plug Domain CIW72_07890 PF00593 TonB dependent receptor CIW72_07915 PF00654 Voltage gated chloride channel CIW72_07925 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CIW72_07925 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CIW72_07975 PF00270 DEAD/DEAH box helicase CIW72_07975 PF00271 Helicase conserved C-terminal domain CIW72_07975 PF03880 DbpA RNA binding domain CIW72_07980 PF00563 EAL domain CIW72_07980 PF08448 PAS fold CIW72_07980 PF00990 Diguanylate cyclase, GGDEF domain CIW72_07985 PF01479 S4 domain CIW72_07985 PF00849 RNA pseudouridylate synthase CIW72_07990 PF00990 Diguanylate cyclase, GGDEF domain CIW72_07990 PF00072 Response regulator receiver domain CIW72_08010 PF03737 Aldolase/RraA CIW72_08020 PF00999 Sodium/hydrogen exchanger family CIW72_08030 PF00072 Response regulator receiver domain CIW72_08030 PF00486 Transcriptional regulatory protein, C terminal CIW72_08035 PF02321 Outer membrane efflux protein CIW72_08050 PF00873 AcrB/AcrD/AcrF family CIW72_08065 PF00005 ABC transporter CIW72_08065 PF00664 ABC transporter transmembrane region CIW72_08095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW72_08095 PF03466 LysR substrate binding domain CIW72_08105 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CIW72_08110 PF04070 Domain of unknown function (DUF378) CIW72_08135 PF00085 Thioredoxin CIW72_08145 PF13603 Leucyl-tRNA synthetase, Domain 2 CIW72_08145 PF00133 tRNA synthetases class I (I, L, M and V) CIW72_08145 PF08264 Anticodon-binding domain of tRNA CIW72_08160 PF01467 Cytidylyltransferase-like CIW72_08175 PF02590 Predicted SPOUT methyltransferase CIW72_08190 PF04402 Protein of unknown function (DUF541) CIW72_08195 PF02545 Maf-like protein CIW72_08200 PF00575 S1 RNA binding domain CIW72_08200 PF10150 Ribonuclease E/G family CIW72_08205 PF13502 AsmA-like C-terminal region CIW72_08205 PF13116 Protein of unknown function CIW72_08215 PF01523 Putative modulator of DNA gyrase CIW72_08220 PF04751 Protein of unknown function (DUF615) CIW72_08225 PF01523 Putative modulator of DNA gyrase CIW72_08235 PF14521 Lysine-specific metallo-endopeptidase CIW72_08240 PF00348 Polyprenyl synthetase CIW72_08245 PF02609 Exonuclease VII small subunit CIW72_08250 PF01171 PP-loop family CIW72_08250 PF11734 TilS substrate C-terminal domain CIW72_08250 PF09179 TilS substrate binding domain CIW72_08260 PF00245 Alkaline phosphatase CIW72_08265 PF00375 Sodium:dicarboxylate symporter family CIW72_08280 PF00877 NlpC/P60 family CIW72_08285 PF00877 NlpC/P60 family CIW72_08290 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CIW72_08295 PF04235 Protein of unknown function (DUF418) CIW72_08300 PF01266 FAD dependent oxidoreductase CIW72_08305 PF07992 Pyridine nucleotide-disulphide oxidoreductase CIW72_08305 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CIW72_08310 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CIW72_08325 PF05649 Peptidase family M13 CIW72_08325 PF01431 Peptidase family M13 CIW72_08335 PF05649 Peptidase family M13 CIW72_08335 PF01431 Peptidase family M13 CIW72_08355 PF10609 NUBPL iron-transfer P-loop NTPase CIW72_08365 PF00692 dUTPase CIW72_08385 PF01738 Dienelactone hydrolase family CIW72_08410 PF01272 Transcription elongation factor, GreA/GreB, C-term CIW72_08410 PF03449 Transcription elongation factor, N-terminal CIW72_08430 PF00293 NUDIX domain CIW72_08435 PF05872 Bacterial protein of unknown function (DUF853) CIW72_08450 PF02666 Phosphatidylserine decarboxylase CIW72_08455 PF02630 SCO1/SenC CIW72_08460 PF05175 Methyltransferase small domain CIW72_08465 PF01264 Chorismate synthase CIW72_08470 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CIW72_08470 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CIW72_08475 PF02774 Semialdehyde dehydrogenase, dimerisation domain CIW72_08475 PF01118 Semialdehyde dehydrogenase, NAD binding domain CIW72_08495 PF01416 tRNA pseudouridine synthase CIW72_08500 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CIW72_08505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW72_08505 PF03466 LysR substrate binding domain CIW72_08510 PF00291 Pyridoxal-phosphate dependent enzyme CIW72_08520 PF00290 Tryptophan synthase alpha chain CIW72_08525 PF17848 Acetyl-coA carboxylase zinc finger domain CIW72_08525 PF01039 Carboxyl transferase domain CIW72_08530 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CIW72_08530 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CIW72_08530 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CIW72_08530 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CIW72_08545 PF00563 EAL domain CIW72_08545 PF00990 Diguanylate cyclase, GGDEF domain CIW72_08545 PF03707 Bacterial signalling protein N terminal repeat CIW72_08560 PF00106 short chain dehydrogenase CIW72_08565 PF00121 Triosephosphate isomerase CIW72_08580 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CIW72_08585 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CIW72_08590 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CIW72_08595 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CIW72_08605 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CIW72_08605 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CIW72_08605 PF10531 SLBB domain CIW72_08610 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal CIW72_08610 PF00384 Molybdopterin oxidoreductase CIW72_08610 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CIW72_08615 PF00146 NADH dehydrogenase CIW72_08620 PF12838 4Fe-4S dicluster domain CIW72_08625 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CIW72_08630 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CIW72_08635 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CIW72_08635 PF00361 Proton-conducting membrane transporter CIW72_08640 PF00361 Proton-conducting membrane transporter CIW72_08640 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus CIW72_08645 PF00361 Proton-conducting membrane transporter CIW72_08655 PF02576 RimP N-terminal domain CIW72_08655 PF17384 RimP C-terminal SH3 domain CIW72_08660 PF13184 NusA-like KH domain CIW72_08660 PF08529 NusA N-terminal domain CIW72_08660 PF00575 S1 RNA binding domain CIW72_08665 PF00009 Elongation factor Tu GTP binding domain CIW72_08665 PF11987 Translation-initiation factor 2 CIW72_08665 PF08364 Bacterial translation initiation factor IF-2 associated region CIW72_08665 PF04760 Translation initiation factor IF-2, N-terminal region CIW72_08670 PF02033 Ribosome-binding factor A CIW72_08675 PF01509 TruB family pseudouridylate synthase (N terminal domain) CIW72_08675 PF09157 Pseudouridine synthase II TruB, C-terminal CIW72_08675 PF16198 tRNA pseudouridylate synthase B C-terminal domain CIW72_08680 PF00312 Ribosomal protein S15 CIW72_08685 PF00013 KH domain CIW72_08685 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CIW72_08685 PF01138 3' exoribonuclease family, domain 1 CIW72_08685 PF03725 3' exoribonuclease family, domain 2 CIW72_08685 PF00575 S1 RNA binding domain CIW72_08695 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CIW72_08695 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CIW72_08705 PF00731 AIR carboxylase CIW72_08710 PF02222 ATP-grasp domain CIW72_08710 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CIW72_08715 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CIW72_08715 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CIW72_08720 PF00462 Glutaredoxin CIW72_08730 PF01914 MarC family integral membrane protein CIW72_08740 PF00593 TonB dependent receptor CIW72_08745 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases CIW72_08745 PF03641 Possible lysine decarboxylase CIW72_08745 PF11892 Domain of unknown function (DUF3412) CIW72_08750 PF00114 Pilin (bacterial filament) CIW72_08750 PF07963 Prokaryotic N-terminal methylation motif CIW72_08770 PF05567 Neisseria PilC beta-propeller domain CIW72_08790 PF02151 UvrB/uvrC motif CIW72_08790 PF04851 Type III restriction enzyme, res subunit CIW72_08790 PF00271 Helicase conserved C-terminal domain CIW72_08790 PF12344 Ultra-violet resistance protein B CIW72_08790 PF17757 UvrB interaction domain CIW72_08810 PF02534 Type IV secretory system Conjugative DNA transfer CIW72_08830 PF03743 Bacterial conjugation TrbI-like protein CIW72_08835 PF00437 Type II/IV secretion system protein CIW72_08840 PF01464 Transglycosylase SLT domain CIW72_08850 PF05101 Type IV secretory pathway, VirB3-like protein CIW72_08855 PF03135 CagE, TrbE, VirB family, component of type IV transporter system CIW72_08895 PF00128 Alpha amylase, catalytic domain CIW72_08910 PF14508 Glycosyl-hydrolase 97 N-terminal CIW72_08910 PF10566 Glycoside hydrolase 97 CIW72_08910 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation CIW72_08920 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CIW72_08925 PF00686 Starch binding domain CIW72_08925 PF00128 Alpha amylase, catalytic domain CIW72_08930 PF00356 Bacterial regulatory proteins, lacI family CIW72_08935 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CIW72_08935 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CIW72_08935 PF02824 TGS domain CIW72_08935 PF03129 Anticodon binding domain CIW72_08940 PF05198 Translation initiation factor IF-3, N-terminal domain CIW72_08940 PF00707 Translation initiation factor IF-3, C-terminal domain CIW72_08945 PF01632 Ribosomal protein L35 CIW72_08950 PF00453 Ribosomal protein L20 CIW72_08955 PF01409 tRNA synthetases class II core domain (F) CIW72_08955 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CIW72_08960 PF01588 Putative tRNA binding domain CIW72_08960 PF03483 B3/4 domain CIW72_08960 PF03484 tRNA synthetase B5 domain CIW72_08960 PF03147 Ferredoxin-fold anticodon binding domain CIW72_08960 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CIW72_08965 PF00216 Bacterial DNA-binding protein CIW72_08970 PF13411 MerR HTH family regulatory protein CIW72_08990 PF02397 Bacterial sugar transferase CIW72_09010 PF13439 Glycosyltransferase Family 4 CIW72_09010 PF00534 Glycosyl transferases group 1 CIW72_09020 PF14667 Polysaccharide biosynthesis C-terminal domain CIW72_09035 PF03808 Glycosyl transferase WecB/TagA/CpsF family CIW72_09050 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CIW72_09050 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CIW72_09055 PF16123 Hydroxyacylglutathione hydrolase C-terminus CIW72_09055 PF00753 Metallo-beta-lactamase superfamily CIW72_09060 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family CIW72_09080 PF02780 Transketolase, C-terminal domain CIW72_09080 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CIW72_09080 PF02779 Transketolase, pyrimidine binding domain CIW72_09090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CIW72_09090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CIW72_09090 PF12806 Acetyl-CoA dehydrogenase C-terminal like CIW72_09090 PF02770 Acyl-CoA dehydrogenase, middle domain CIW72_09105 PF08212 Lipocalin-like domain CIW72_09140 PF00072 Response regulator receiver domain CIW72_09140 PF13426 PAS domain CIW72_09140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_09145 PF04362 Bacterial Fe(2+) trafficking CIW72_09150 PF00633 Helix-hairpin-helix motif CIW72_09150 PF00730 HhH-GPD superfamily base excision DNA repair protein CIW72_09150 PF14815 NUDIX domain CIW72_09150 PF10576 Iron-sulfur binding domain of endonuclease III CIW72_09160 PF00448 SRP54-type protein, GTPase domain CIW72_09160 PF02881 SRP54-type protein, helical bundle domain CIW72_09170 PF05544 Proline racemase CIW72_09175 PF01266 FAD dependent oxidoreductase CIW72_09185 PF04324 BFD-like [2Fe-2S] binding domain CIW72_09185 PF07992 Pyridine nucleotide-disulphide oxidoreductase CIW72_09190 PF00701 Dihydrodipicolinate synthetase family CIW72_09195 PF00171 Aldehyde dehydrogenase family CIW72_09200 PF00557 Metallopeptidase family M24 CIW72_09200 PF01321 Creatinase/Prolidase N-terminal domain CIW72_09215 PF13520 Amino acid permease CIW72_09255 PF00593 TonB dependent receptor CIW72_09255 PF07715 TonB-dependent Receptor Plug Domain CIW72_09265 PF07532 Bacterial Ig-like domain (group 4) CIW72_09270 PF04616 Glycosyl hydrolases family 43 CIW72_09280 PF00593 TonB dependent receptor CIW72_09280 PF07715 TonB-dependent Receptor Plug Domain CIW72_09310 PF00183 Hsp90 protein CIW72_09310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_09320 PF01467 Cytidylyltransferase-like CIW72_09335 PF00037 4Fe-4S binding domain CIW72_09345 PF00759 Glycosyl hydrolase family 9 CIW72_09345 PF02927 Cellulase N-terminal ig-like domain CIW72_09390 PF02547 Queuosine biosynthesis protein CIW72_09395 PF01702 Queuine tRNA-ribosyltransferase CIW72_09400 PF02699 Preprotein translocase subunit CIW72_09405 PF07549 SecD/SecF GG Motif CIW72_09405 PF13721 SecD export protein N-terminal TM region CIW72_09405 PF02355 Protein export membrane protein CIW72_09410 PF02355 Protein export membrane protein CIW72_09410 PF07549 SecD/SecF GG Motif CIW72_09435 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CIW72_09440 PF00294 pfkB family carbohydrate kinase CIW72_09445 PF05524 PEP-utilising enzyme, N-terminal CIW72_09445 PF00391 PEP-utilising enzyme, mobile domain CIW72_09445 PF02896 PEP-utilising enzyme, TIM barrel domain CIW72_09445 PF00381 PTS HPr component phosphorylation site CIW72_09445 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CIW72_09450 PF00356 Bacterial regulatory proteins, lacI family CIW72_09455 PF00873 AcrB/AcrD/AcrF family CIW72_09460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CIW72_09460 PF00529 HlyD membrane-fusion protein of T1SS CIW72_09470 PF05088 Bacterial NAD-glutamate dehydrogenase CIW72_09490 PF00072 Response regulator receiver domain CIW72_09495 PF00072 Response regulator receiver domain CIW72_09495 PF00672 HAMP domain CIW72_09495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_09495 PF00512 His Kinase A (phospho-acceptor) domain CIW72_09495 PF01627 Hpt domain CIW72_09495 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CIW72_09500 PF04286 Protein of unknown function (DUF445) CIW72_09510 PF00202 Aminotransferase class-III CIW72_09525 PF07690 Major Facilitator Superfamily CIW72_09530 PF02634 FdhD/NarQ family CIW72_09535 PF00384 Molybdopterin oxidoreductase CIW72_09545 PF07690 Major Facilitator Superfamily CIW72_09545 PF00083 Sugar (and other) transporter CIW72_09550 PF01814 Hemerythrin HHE cation binding domain CIW72_09555 PF00990 Diguanylate cyclase, GGDEF domain CIW72_09555 PF00072 Response regulator receiver domain CIW72_09565 PF00120 Glutamine synthetase, catalytic domain CIW72_09570 PF07722 Peptidase C26 CIW72_09575 PF00120 Glutamine synthetase, catalytic domain CIW72_09580 PF00202 Aminotransferase class-III CIW72_09585 PF13416 Bacterial extracellular solute-binding protein CIW72_09590 PF13533 Biotin-lipoyl like CIW72_09595 PF07690 Major Facilitator Superfamily CIW72_09600 PF02321 Outer membrane efflux protein CIW72_09605 PF00005 ABC transporter CIW72_09605 PF08402 TOBE domain CIW72_09610 PF00528 Binding-protein-dependent transport system inner membrane component CIW72_09615 PF00528 Binding-protein-dependent transport system inner membrane component CIW72_09620 PF00171 Aldehyde dehydrogenase family CIW72_09635 PF00571 CBS domain CIW72_09635 PF03471 Transporter associated domain CIW72_09645 PF02130 Uncharacterized protein family UPF0054 CIW72_09655 PF02562 PhoH-like protein CIW72_09660 PF00919 Uncharacterized protein family UPF0004 CIW72_09660 PF01938 TRAM domain CIW72_09660 PF04055 Radical SAM superfamily CIW72_09675 PF01464 Transglycosylase SLT domain CIW72_09685 PF00355 Rieske [2Fe-2S] domain CIW72_09685 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CIW72_09690 PF00032 Cytochrome b(C-terminal)/b6/petD CIW72_09690 PF00033 Cytochrome b/b6/petB CIW72_09695 PF02167 Cytochrome C1 family CIW72_09700 PF02798 Glutathione S-transferase, N-terminal domain CIW72_09700 PF00043 Glutathione S-transferase, C-terminal domain CIW72_09705 PF04386 Stringent starvation protein B CIW72_09725 PF00271 Helicase conserved C-terminal domain CIW72_09725 PF00270 DEAD/DEAH box helicase CIW72_09725 PF08494 DEAD/H associated CIW72_09730 PF02245 Methylpurine-DNA glycosylase (MPG) CIW72_09735 PF00672 HAMP domain CIW72_09735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW72_09735 PF02743 Cache domain CIW72_09775 PF01068 ATP dependent DNA ligase domain CIW72_09775 PF13298 DNA polymerase Ligase (LigD) CIW72_09775 PF04679 ATP dependent DNA ligase C terminal region CIW72_09780 PF01612 3'-5' exonuclease CIW72_09780 PF00570 HRDC domain CIW72_09795 PF03781 Sulfatase-modifying factor enzyme 1 CIW72_09805 PF02601 Exonuclease VII, large subunit CIW72_09805 PF13742 OB-fold nucleic acid binding domain CIW72_09810 PF08331 Domain of unknown function (DUF1730) CIW72_09815 PF03853 YjeF-related protein N-terminus CIW72_09815 PF01256 Carbohydrate kinase CIW72_09820 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CIW72_09825 PF11741 AMIN domain CIW72_09825 PF01520 N-acetylmuramoyl-L-alanine amidase CIW72_09830 PF08676 MutL C terminal dimerisation domain CIW72_09830 PF01119 DNA mismatch repair protein, C-terminal domain CIW72_09850 PF07879 PHB/PHA accumulation regulator DNA-binding domain CIW72_09850 PF05233 PHB accumulation regulatory domain CIW72_09855 PF00106 short chain dehydrogenase CIW72_09860 PF00749 tRNA synthetases class I (E and Q), catalytic domain CIW72_09865 PF01435 Peptidase family M48 CIW72_09870 PF00990 Diguanylate cyclase, GGDEF domain CIW72_09870 PF00072 Response regulator receiver domain CIW72_09870 PF00563 EAL domain CIW72_09880 PF07152 YaeQ protein CIW72_09885 PF00313 'Cold-shock' DNA-binding domain CIW72_09890 PF02798 Glutathione S-transferase, N-terminal domain CIW72_09890 PF14497 Glutathione S-transferase, C-terminal domain CIW72_09895 PF00135 Carboxylesterase family CIW72_09900 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CIW72_09905 PF00156 Phosphoribosyl transferase domain CIW72_09910 PF00270 DEAD/DEAH box helicase CIW72_09910 PF03880 DbpA RNA binding domain CIW72_09910 PF00271 Helicase conserved C-terminal domain CIW72_09930 PF00545 ribonuclease CIW72_09935 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CIW72_09935 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CIW72_09940 PF00459 Inositol monophosphatase family CIW72_09945 PF00588 SpoU rRNA Methylase family CIW72_09955 PF13188 PAS domain CIW72_09955 PF03707 Bacterial signalling protein N terminal repeat CIW72_09955 PF00990 Diguanylate cyclase, GGDEF domain CIW72_09955 PF00563 EAL domain CIW72_09960 PF04055 Radical SAM superfamily CIW72_09965 PF09285 Elongation factor P, C-terminal CIW72_09965 PF01132 Elongation factor P (EF-P) OB domain CIW72_09965 PF08207 Elongation factor P (EF-P) KOW-like domain CIW72_09975 PF01979 Amidohydrolase family CIW72_09985 PF13419 Haloacid dehalogenase-like hydrolase CIW72_09995 PF00295 Glycosyl hydrolases family 28 CIW72_10035 PF00753 Metallo-beta-lactamase superfamily CIW72_10045 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CIW72_10050 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CIW72_10070 PF08460 Bacterial SH3 domain CIW72_10070 PF01551 Peptidase family M23 CIW72_10075 PF01979 Amidohydrolase family CIW72_10080 PF01809 Putative membrane protein insertion efficiency factor CIW72_10085 PF01258 Prokaryotic dksA/traR C4-type zinc finger CIW72_10095 PF02657 Fe-S metabolism associated domain CIW72_10100 PF01406 tRNA synthetases class I (C) catalytic domain CIW72_10100 PF09190 DALR domain CIW72_10110 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CIW72_10110 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CIW72_10115 PF00764 Arginosuccinate synthase CIW72_10130 PF00696 Amino acid kinase family CIW72_10130 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase CIW72_10140 PF01118 Semialdehyde dehydrogenase, NAD binding domain CIW72_10145 PF00206 Lyase CIW72_10155 PF00696 Amino acid kinase family CIW72_10155 PF01472 PUA domain CIW72_10160 PF00171 Aldehyde dehydrogenase family CIW72_10170 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CIW72_10170 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CIW72_10190 PF02322 Cytochrome bd terminal oxidase subunit II CIW72_10195 PF01654 Cytochrome bd terminal oxidase subunit I CIW72_10200 PF00005 ABC transporter CIW72_10200 PF00664 ABC transporter transmembrane region CIW72_10205 PF00005 ABC transporter CIW72_10205 PF00664 ABC transporter transmembrane region CIW72_10210 PF00313 'Cold-shock' DNA-binding domain CIW72_10215 PF00561 alpha/beta hydrolase fold CIW72_10225 PF03918 Cytochrome C biogenesis protein CIW72_10230 PF08534 Redoxin CIW72_10235 PF01578 Cytochrome C assembly protein CIW72_10235 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CIW72_10240 PF03100 CcmE CIW72_10250 PF01578 Cytochrome C assembly protein CIW72_10255 PF03379 CcmB protein CIW72_10260 PF00005 ABC transporter CIW72_10265 PF00155 Aminotransferase class I and II CIW72_10270 PF00795 Carbon-nitrogen hydrolase CIW72_10285 PF01479 S4 domain CIW72_10285 PF00849 RNA pseudouridylate synthase CIW72_10290 PF04079 Segregation and condensation complex subunit ScpB CIW72_10295 PF02616 Segregation and condensation protein ScpA CIW72_10300 PF03795 YCII-related domain CIW72_10310 PF00356 Bacterial regulatory proteins, lacI family CIW72_10330 PF00528 Binding-protein-dependent transport system inner membrane component CIW72_10335 PF00528 Binding-protein-dependent transport system inner membrane component CIW72_10360 PF00795 Carbon-nitrogen hydrolase CIW72_10365 PF04371 Porphyromonas-type peptidyl-arginine deiminase CIW72_10380 PF00444 Ribosomal protein L36 CIW72_10385 PF02224 Cytidylate kinase CIW72_10390 PF00575 S1 RNA binding domain CIW72_10395 PF00216 Bacterial DNA-binding protein CIW72_10405 PF18073 Rubredoxin metal binding domain CIW72_10410 PF00953 Glycosyl transferase family 4 CIW72_10415 PF02719 Polysaccharide biosynthesis protein CIW72_10420 PF00483 Nucleotidyl transferase CIW72_10425 PF02254 TrkA-N domain CIW72_10425 PF00999 Sodium/hydrogen exchanger family CIW72_10435 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CIW72_10435 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CIW72_10440 PF00478 IMP dehydrogenase / GMP reductase domain CIW72_10440 PF00571 CBS domain CIW72_10445 PF00117 Glutamine amidotransferase class-I CIW72_10445 PF02540 NAD synthase CIW72_10445 PF00958 GMP synthase C terminal domain CIW72_10450 PF13356 Arm DNA-binding domain CIW72_10450 PF00589 Phage integrase family CIW72_10490 PF00248 Aldo/keto reductase family CIW72_10500 PF08240 Alcohol dehydrogenase GroES-like domain CIW72_10500 PF00107 Zinc-binding dehydrogenase CIW72_10520 PF12706 Beta-lactamase superfamily domain CIW72_10530 PF00873 AcrB/AcrD/AcrF family CIW72_10535 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CIW72_10540 PF02321 Outer membrane efflux protein CIW72_10545 PF17754 MftR C-terminal domain CIW72_10545 PF00440 Bacterial regulatory proteins, tetR family CIW72_10560 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) CIW72_10565 PF00361 Proton-conducting membrane transporter CIW72_10565 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus CIW72_10565 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CIW72_10570 PF03466 LysR substrate binding domain CIW72_10570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW72_10590 PF00072 Response regulator receiver domain CIW72_10590 PF00196 Bacterial regulatory proteins, luxR family CIW72_10605 PF00857 Isochorismatase family CIW72_10615 PF07969 Amidohydrolase family CIW72_10620 PF05977 Transmembrane secretion effector CIW72_10625 PF00561 alpha/beta hydrolase fold CIW72_10630 PF01566 Natural resistance-associated macrophage protein CIW72_10635 PF01325 Iron dependent repressor, N-terminal DNA binding domain CIW72_10635 PF02742 Iron dependent repressor, metal binding and dimerisation domain CIW72_10640 PF14437 MafB19-like deaminase CIW72_10645 PF00929 Exonuclease CIW72_10650 PF05552 Conserved TM helix CIW72_10650 PF00924 Mechanosensitive ion channel CIW72_10655 PF02896 PEP-utilising enzyme, TIM barrel domain CIW72_10655 PF00391 PEP-utilising enzyme, mobile domain CIW72_10655 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CIW72_10660 PF03618 Kinase/pyrophosphorylase CIW72_10680 PF01066 CDP-alcohol phosphatidyltransferase CIW72_10690 PF00561 alpha/beta hydrolase fold CIW72_10705 PF01266 FAD dependent oxidoreductase CIW72_10705 PF00355 Rieske [2Fe-2S] domain CIW72_10715 PF16921 Tex protein YqgF-like domain CIW72_10715 PF00575 S1 RNA binding domain CIW72_10715 PF17674 HHH domain CIW72_10715 PF09371 Tex-like protein N-terminal domain CIW72_10725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_10725 PF00512 His Kinase A (phospho-acceptor) domain CIW72_10725 PF09308 LuxQ, periplasmic CIW72_10725 PF00072 Response regulator receiver domain CIW72_10770 PF00034 Cytochrome c CIW72_10780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CIW72_10785 PF00873 AcrB/AcrD/AcrF family CIW72_10820 PF01081 KDPG and KHG aldolase CIW72_10825 PF00920 Dehydratase family CIW72_10830 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CIW72_10835 PF02685 Glucokinase CIW72_10840 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CIW72_10840 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CIW72_10845 PF00005 ABC transporter CIW72_10845 PF17912 MalK OB fold domain CIW72_10860 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CIW72_10865 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CIW72_10870 PF00890 FAD binding domain CIW72_10870 PF02910 Fumarate reductase flavoprotein C-term CIW72_10880 PF13085 2Fe-2S iron-sulfur cluster binding domain CIW72_10885 PF03937 Flavinator of succinate dehydrogenase CIW72_10895 PF02687 FtsX-like permease family CIW72_10895 PF12704 MacB-like periplasmic core domain CIW72_10900 PF00005 ABC transporter CIW72_10910 PF03772 Competence protein CIW72_10910 PF00753 Metallo-beta-lactamase superfamily CIW72_10915 PF01618 MotA/TolQ/ExbB proton channel family CIW72_10925 PF00005 ABC transporter CIW72_10925 PF00664 ABC transporter transmembrane region CIW72_10930 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CIW72_10935 PF02348 Cytidylyltransferase CIW72_10940 PF01451 Low molecular weight phosphotyrosine protein phosphatase CIW72_10950 PF01541 GIY-YIG catalytic domain CIW72_10950 PF02151 UvrB/uvrC motif CIW72_10950 PF08459 UvrC Helix-hairpin-helix N-terminal CIW72_10955 PF01066 CDP-alcohol phosphatidyltransferase CIW72_10990 PF01627 Hpt domain CIW72_10990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_10990 PF02895 Signal transducing histidine kinase, homodimeric domain CIW72_10990 PF07194 P2 response regulator binding domain CIW72_10990 PF01584 CheW-like domain CIW72_10995 PF04344 Chemotaxis phosphatase, CheZ CIW72_11000 PF00072 Response regulator receiver domain CIW72_11005 PF04545 Sigma-70, region 4 CIW72_11005 PF04539 Sigma-70 region 3 CIW72_11005 PF04542 Sigma-70 region 2 CIW72_11010 PF10609 NUBPL iron-transfer P-loop NTPase CIW72_11015 PF00448 SRP54-type protein, GTPase domain CIW72_11020 PF00771 FHIPEP family CIW72_11025 PF01312 FlhB HrpN YscU SpaS Family CIW72_11030 PF00990 Diguanylate cyclase, GGDEF domain CIW72_11030 PF00563 EAL domain CIW72_11030 PF03707 Bacterial signalling protein N terminal repeat CIW72_11035 PF00990 Diguanylate cyclase, GGDEF domain CIW72_11035 PF03707 Bacterial signalling protein N terminal repeat CIW72_11035 PF00563 EAL domain CIW72_11035 PF13188 PAS domain CIW72_11050 PF03695 Uncharacterised protein family (UPF0149) CIW72_11050 PF02810 SEC-C motif CIW72_11055 PF13700 Domain of unknown function (DUF4158) CIW72_11055 PF01526 Tn3 transposase DDE domain CIW72_11070 PF02796 Helix-turn-helix domain of resolvase CIW72_11070 PF00239 Resolvase, N terminal domain CIW72_11080 PF01311 Bacterial export proteins, family 1 CIW72_11085 PF01313 Bacterial export proteins, family 3 CIW72_11090 PF00813 FliP family CIW72_11095 PF04347 Flagellar biosynthesis protein, FliO CIW72_11100 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CIW72_11105 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CIW72_11105 PF02154 Flagellar motor switch protein FliM CIW72_11125 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CIW72_11125 PF18269 T3SS EscN ATPase C-terminal domain CIW72_11135 PF14841 FliG middle domain CIW72_11135 PF14842 FliG N-terminal domain CIW72_11135 PF01706 FliG C-terminal domain CIW72_11140 PF01514 Secretory protein of YscJ/FliF family CIW72_11140 PF08345 Flagellar M-ring protein C-terminal CIW72_11145 PF02049 Flagellar hook-basal body complex protein FliE CIW72_11155 PF00534 Glycosyl transferases group 1 CIW72_11155 PF00535 Glycosyl transferase family 2 CIW72_11160 PF04230 Polysaccharide pyruvyl transferase CIW72_11195 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CIW72_11195 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CIW72_11205 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CIW72_11210 PF00158 Sigma-54 interaction domain CIW72_11210 PF00072 Response regulator receiver domain CIW72_11210 PF02954 Bacterial regulatory protein, Fis family CIW72_11215 PF01339 CheB methylesterase CIW72_11215 PF00072 Response regulator receiver domain CIW72_11220 PF04552 Sigma-54, DNA binding domain CIW72_11220 PF04963 Sigma-54 factor, core binding domain CIW72_11220 PF00309 Sigma-54 factor, Activator interacting domain (AID) CIW72_11225 PF00072 Response regulator receiver domain CIW72_11225 PF00196 Bacterial regulatory proteins, luxR family CIW72_11240 PF02561 Flagellar protein FliS CIW72_11245 PF07196 Flagellin hook IN motif CIW72_11245 PF07195 Flagellar hook-associated protein 2 C-terminus CIW72_11245 PF02465 Flagellar hook-associated protein 2 N-terminus CIW72_11250 PF00700 Bacterial flagellin C-terminal helical region CIW72_11250 PF00669 Bacterial flagellin N-terminal helical region CIW72_11255 PF00669 Bacterial flagellin N-terminal helical region CIW72_11255 PF00700 Bacterial flagellin C-terminal helical region CIW72_11260 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CIW72_11260 PF07196 Flagellin hook IN motif CIW72_11265 PF10135 Rod binding protein CIW72_11265 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CIW72_11270 PF02119 Flagellar P-ring protein CIW72_11275 PF02107 Flagellar L-ring protein CIW72_11280 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CIW72_11280 PF00460 Flagella basal body rod protein CIW72_11295 PF00460 Flagella basal body rod protein CIW72_11295 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CIW72_11300 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CIW72_11300 PF00460 Flagella basal body rod protein CIW72_11300 PF07559 Flagellar basal body protein FlaE CIW72_11305 PF03963 Flagellar hook capping protein - N-terminal region CIW72_11310 PF00460 Flagella basal body rod protein CIW72_11310 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CIW72_11320 PF01584 CheW-like domain CIW72_11320 PF00072 Response regulator receiver domain CIW72_11340 PF13426 PAS domain CIW72_11340 PF13188 PAS domain CIW72_11340 PF00989 PAS fold CIW72_11340 PF00512 His Kinase A (phospho-acceptor) domain CIW72_11340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_11345 PF03707 Bacterial signalling protein N terminal repeat CIW72_11345 PF00990 Diguanylate cyclase, GGDEF domain CIW72_11345 PF00563 EAL domain CIW72_11350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_11350 PF07730 Histidine kinase CIW72_11355 PF00990 Diguanylate cyclase, GGDEF domain CIW72_11355 PF03707 Bacterial signalling protein N terminal repeat CIW72_11355 PF00563 EAL domain CIW72_11365 PF12729 Four helix bundle sensory module for signal transduction CIW72_11365 PF00672 HAMP domain CIW72_11365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW72_11370 PF04356 Protein of unknown function (DUF489) CIW72_11380 PF00293 NUDIX domain CIW72_11385 PF02617 ATP-dependent Clp protease adaptor protein ClpS CIW72_11390 PF10431 C-terminal, D2-small domain, of ClpB protein CIW72_11390 PF02861 Clp amino terminal domain, pathogenicity island component CIW72_11390 PF17871 AAA lid domain CIW72_11390 PF07724 AAA domain (Cdc48 subfamily) CIW72_11390 PF00004 ATPase family associated with various cellular activities (AAA) CIW72_11395 PF01176 Translation initiation factor 1A / IF-1 CIW72_11400 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CIW72_11410 PF07992 Pyridine nucleotide-disulphide oxidoreductase CIW72_11415 PF01580 FtsK/SpoIIIE family CIW72_11415 PF09397 Ftsk gamma domain CIW72_11415 PF17854 FtsK alpha domain CIW72_11415 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CIW72_11425 PF03548 Outer membrane lipoprotein carrier protein LolA CIW72_11435 PF12002 MgsA AAA+ ATPase C terminal CIW72_11435 PF16193 AAA C-terminal domain CIW72_11435 PF00004 ATPase family associated with various cellular activities (AAA) CIW72_11440 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CIW72_11450 PF00108 Thiolase, N-terminal domain CIW72_11450 PF02803 Thiolase, C-terminal domain CIW72_11455 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CIW72_11455 PF00378 Enoyl-CoA hydratase/isomerase CIW72_11455 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CIW72_11465 PF00334 Nucleoside diphosphate kinase CIW72_11470 PF04055 Radical SAM superfamily CIW72_11480 PF13464 Domain of unknown function (DUF4115) CIW72_11490 PF13360 PQQ-like domain CIW72_11490 PF01011 PQQ enzyme repeat CIW72_11495 PF01926 50S ribosome-binding GTPase CIW72_11495 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CIW72_11500 PF03453 MoeA N-terminal region (domain I and II) CIW72_11500 PF03454 MoeA C-terminal region (domain IV) CIW72_11500 PF00994 Probable molybdopterin binding domain CIW72_11505 PF00899 ThiF family CIW72_11535 PF00107 Zinc-binding dehydrogenase CIW72_11535 PF13823 Alcohol dehydrogenase GroES-associated CIW72_11535 PF08240 Alcohol dehydrogenase GroES-like domain CIW72_11595 PF00145 C-5 cytosine-specific DNA methylase CIW72_11645 PF03377 TAL effector repeat CIW72_11660 PF03372 Endonuclease/Exonuclease/phosphatase family CIW72_11670 PF03454 MoeA C-terminal region (domain IV) CIW72_11670 PF00994 Probable molybdopterin binding domain CIW72_11670 PF03453 MoeA N-terminal region (domain I and II) CIW72_11675 PF12804 MobA-like NTP transferase domain CIW72_11685 PF14824 Sirohaem biosynthesis protein central CIW72_11685 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CIW72_11685 PF10414 Sirohaem synthase dimerisation region CIW72_11710 PF05974 Domain of unknown function (DUF892) CIW72_11730 PF00563 EAL domain CIW72_11730 PF08447 PAS fold CIW72_11730 PF00990 Diguanylate cyclase, GGDEF domain CIW72_11730 PF08448 PAS fold CIW72_11735 PF12951 Passenger-associated-transport-repeat CIW72_11735 PF12951 Passenger-associated-transport-repeat CIW72_11740 PF00072 Response regulator receiver domain CIW72_11740 PF00196 Bacterial regulatory proteins, luxR family CIW72_11745 PF00072 Response regulator receiver domain CIW72_11745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_11745 PF00512 His Kinase A (phospho-acceptor) domain CIW72_11745 PF13426 PAS domain CIW72_11745 PF08448 PAS fold CIW72_11755 PF00873 AcrB/AcrD/AcrF family CIW72_11760 PF00529 HlyD membrane-fusion protein of T1SS CIW72_11760 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CIW72_11770 PF00082 Subtilase family CIW72_11770 PF03797 Autotransporter beta-domain CIW72_11780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_11780 PF07694 5TMR of 5TMR-LYT CIW72_11780 PF06580 Histidine kinase CIW72_11785 PF04397 LytTr DNA-binding domain CIW72_11785 PF00072 Response regulator receiver domain CIW72_11795 PF00144 Beta-lactamase CIW72_11805 PF07995 Glucose / Sorbosone dehydrogenase CIW72_11820 PF09335 SNARE associated Golgi protein CIW72_11825 PF01494 FAD binding domain CIW72_11925 PF17091 Inovirus G7P protein CIW72_12085 PF01106 NifU-like domain CIW72_12090 PF01329 Pterin 4 alpha carbinolamine dehydratase CIW72_12100 PF02535 ZIP Zinc transporter CIW72_12110 PF00849 RNA pseudouridylate synthase CIW72_12110 PF01479 S4 domain CIW72_12115 PF12111 Polyribonucleotide phosphorylase C terminal CIW72_12115 PF10150 Ribonuclease E/G family CIW72_12115 PF00575 S1 RNA binding domain CIW72_12120 PF00196 Bacterial regulatory proteins, luxR family CIW72_12120 PF00072 Response regulator receiver domain CIW72_12135 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CIW72_12145 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CIW72_12145 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CIW72_12145 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CIW72_12155 PF17837 4'-phosphopantetheinyl transferase N-terminal domain CIW72_12155 PF01648 4'-phosphopantetheinyl transferase superfamily CIW72_12160 PF00501 AMP-binding enzyme CIW72_12160 PF13193 AMP-binding enzyme C-terminal domain CIW72_12160 PF00668 Condensation domain CIW72_12160 PF00550 Phosphopantetheine attachment site CIW72_12160 PF00975 Thioesterase domain CIW72_12215 PF01618 MotA/TolQ/ExbB proton channel family CIW72_12220 PF00691 OmpA family CIW72_12220 PF13677 Membrane MotB of proton-channel complex MotA/MotB CIW72_12225 PF13614 AAA domain CIW72_12230 PF01584 CheW-like domain CIW72_12240 PF00072 Response regulator receiver domain CIW72_12245 PF01627 Hpt domain CIW72_12245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_12245 PF02895 Signal transducing histidine kinase, homodimeric domain CIW72_12245 PF09078 CheY binding CIW72_12245 PF01584 CheW-like domain CIW72_12250 PF02203 Tar ligand binding domain homologue CIW72_12250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW72_12250 PF00672 HAMP domain CIW72_12260 PF00672 HAMP domain CIW72_12260 PF17200 Single Cache domain 2 CIW72_12260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW72_12265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW72_12265 PF00672 HAMP domain CIW72_12265 PF02203 Tar ligand binding domain homologue CIW72_12280 PF02203 Tar ligand binding domain homologue CIW72_12280 PF00672 HAMP domain CIW72_12280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW72_12285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW72_12285 PF00672 HAMP domain CIW72_12290 PF02203 Tar ligand binding domain homologue CIW72_12290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW72_12290 PF00672 HAMP domain CIW72_12305 PF02203 Tar ligand binding domain homologue CIW72_12305 PF00672 HAMP domain CIW72_12305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW72_12310 PF02203 Tar ligand binding domain homologue CIW72_12310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW72_12310 PF00672 HAMP domain CIW72_12315 PF02203 Tar ligand binding domain homologue CIW72_12315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW72_12315 PF00672 HAMP domain CIW72_12335 PF07317 Flagellar regulator YcgR CIW72_12335 PF07238 PilZ domain CIW72_12340 PF01584 CheW-like domain CIW72_12350 PF00672 HAMP domain CIW72_12350 PF02203 Tar ligand binding domain homologue CIW72_12350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW72_12355 PF01739 CheR methyltransferase, SAM binding domain CIW72_12355 PF03705 CheR methyltransferase, all-alpha domain CIW72_12360 PF03975 CheD chemotactic sensory transduction CIW72_12365 PF00072 Response regulator receiver domain CIW72_12365 PF01339 CheB methylesterase CIW72_12370 PF03707 Bacterial signalling protein N terminal repeat CIW72_12370 PF00563 EAL domain CIW72_12370 PF00990 Diguanylate cyclase, GGDEF domain CIW72_12375 PF00561 alpha/beta hydrolase fold CIW72_12380 PF11791 Aconitate B N-terminal domain CIW72_12380 PF00330 Aconitase family (aconitate hydratase) CIW72_12380 PF06434 Aconitate hydratase 2 N-terminus CIW72_12395 PF00694 Aconitase C-terminal domain CIW72_12395 PF00330 Aconitase family (aconitate hydratase) CIW72_12405 PF00501 AMP-binding enzyme CIW72_12405 PF13193 AMP-binding enzyme C-terminal domain CIW72_12410 PF00378 Enoyl-CoA hydratase/isomerase CIW72_12415 PF00512 His Kinase A (phospho-acceptor) domain CIW72_12415 PF00072 Response regulator receiver domain CIW72_12415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_12415 PF01627 Hpt domain CIW72_12420 PF00072 Response regulator receiver domain CIW72_12425 PF01336 OB-fold nucleic acid binding domain CIW72_12425 PF00152 tRNA synthetases class II (D, K and N) CIW72_12430 PF00472 RF-1 domain CIW72_12430 PF03462 PCRF domain CIW72_12435 PF00072 Response regulator receiver domain CIW72_12435 PF04397 LytTr DNA-binding domain CIW72_12495 PF01368 DHH family CIW72_12495 PF02272 DHHA1 domain CIW72_12495 PF17768 RecJ OB domain CIW72_12505 PF01272 Transcription elongation factor, GreA/GreB, C-term CIW72_12505 PF03449 Transcription elongation factor, N-terminal CIW72_12510 PF02142 MGS-like domain CIW72_12510 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CIW72_12510 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CIW72_12520 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CIW72_12520 PF00117 Glutamine amidotransferase class-I CIW72_12525 PF01113 Dihydrodipicolinate reductase, N-terminus CIW72_12525 PF05173 Dihydrodipicolinate reductase, C-terminus CIW72_12530 PF03473 MOSC domain CIW72_12530 PF03475 3-alpha domain CIW72_12535 PF00155 Aminotransferase class I and II CIW72_12550 PF02421 Ferrous iron transport protein B CIW72_12550 PF07664 Ferrous iron transport protein B C terminus CIW72_12550 PF07670 Nucleoside recognition CIW72_12560 PF00378 Enoyl-CoA hydratase/isomerase CIW72_12570 PF00682 HMGL-like CIW72_12575 PF00106 short chain dehydrogenase CIW72_12580 PF09285 Elongation factor P, C-terminal CIW72_12580 PF01132 Elongation factor P (EF-P) OB domain CIW72_12580 PF08207 Elongation factor P (EF-P) KOW-like domain CIW72_12600 PF01565 FAD binding domain CIW72_12600 PF02913 FAD linked oxidases, C-terminal domain CIW72_12605 PF01842 ACT domain CIW72_12605 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CIW72_12605 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CIW72_12615 PF13520 Amino acid permease CIW72_12620 PF13520 Amino acid permease CIW72_12625 PF00596 Class II Aldolase and Adducin N-terminal domain CIW72_12630 PF03079 ARD/ARD' family CIW72_12650 PF01502 Phosphoribosyl-AMP cyclohydrolase CIW72_12650 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CIW72_12655 PF00977 Histidine biosynthesis protein CIW72_12660 PF00977 Histidine biosynthesis protein CIW72_12665 PF00117 Glutamine amidotransferase class-I CIW72_12670 PF00475 Imidazoleglycerol-phosphate dehydratase CIW72_12675 PF00155 Aminotransferase class I and II CIW72_12680 PF00815 Histidinol dehydrogenase CIW72_12685 PF08029 HisG, C-terminal domain CIW72_12685 PF01634 ATP phosphoribosyltransferase CIW72_12695 PF03129 Anticodon binding domain CIW72_12695 PF13393 Histidyl-tRNA synthetase CIW72_12700 PF00027 Cyclic nucleotide-binding domain CIW72_12700 PF13545 Crp-like helix-turn-helix domain CIW72_12710 PF14821 Threonine synthase N terminus CIW72_12710 PF00291 Pyridoxal-phosphate dependent enzyme CIW72_12720 PF00288 GHMP kinases N terminal domain CIW72_12720 PF08544 GHMP kinases C terminal CIW72_12725 PF03447 Homoserine dehydrogenase, NAD binding domain CIW72_12725 PF00696 Amino acid kinase family CIW72_12725 PF13840 ACT domain CIW72_12725 PF01842 ACT domain CIW72_12725 PF00742 Homoserine dehydrogenase CIW72_12740 PF05594 Haemagluttinin repeat CIW72_12740 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain CIW72_12740 PF05860 haemagglutination activity domain CIW72_12740 PF13332 Hemagglutinin repeat CIW72_12740 PF13018 Extended Signal Peptide of Type V secretion system CIW72_12785 PF04829 Pre-toxin domain with VENN motif CIW72_12785 PF05860 haemagglutination activity domain CIW72_12785 PF13332 Hemagglutinin repeat CIW72_12790 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CIW72_12790 PF08479 POTRA domain, ShlB-type CIW72_12790 PF17287 POTRA domain CIW72_12800 PF01522 Polysaccharide deacetylase CIW72_12800 PF14883 Hypothetical glycosyl hydrolase family 13 CIW72_12805 PF00535 Glycosyl transferase family 2 CIW72_12830 PF13087 AAA domain CIW72_12830 PF13086 AAA domain CIW72_12830 PF13086 AAA domain CIW72_12830 PF13087 AAA domain CIW72_12830 PF13195 Protein of unknown function (DUF4011) CIW72_12830 PF13195 Protein of unknown function (DUF4011) CIW72_12955 PF00171 Aldehyde dehydrogenase family CIW72_12975 PF01180 Dihydroorotate dehydrogenase CIW72_12980 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CIW72_12980 PF01565 FAD binding domain CIW72_12985 PF00892 EamA-like transporter family CIW72_12995 PF01177 Asp/Glu/Hydantoin racemase CIW72_13000 PF07690 Major Facilitator Superfamily CIW72_13010 PF01569 PAP2 superfamily CIW72_13015 PF04551 GcpE protein CIW72_13030 PF00072 Response regulator receiver domain CIW72_13035 PF00150 Cellulase (glycosyl hydrolase family 5) CIW72_13035 PF02013 Cellulose or protein binding domain CIW72_13045 PF01590 GAF domain CIW72_13045 PF00360 Phytochrome region CIW72_13045 PF00990 Diguanylate cyclase, GGDEF domain CIW72_13045 PF00563 EAL domain CIW72_13050 PF00474 Sodium:solute symporter family CIW72_13060 PF14310 Fibronectin type III-like domain CIW72_13060 PF00933 Glycosyl hydrolase family 3 N terminal domain CIW72_13060 PF01915 Glycosyl hydrolase family 3 C-terminal domain CIW72_13085 PF00342 Phosphoglucose isomerase CIW72_13090 PF02261 Aspartate decarboxylase CIW72_13095 PF02569 Pantoate-beta-alanine ligase CIW72_13100 PF02548 Ketopantoate hydroxymethyltransferase CIW72_13105 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CIW72_13110 PF12626 Polymerase A arginine-rich C-terminus CIW72_13110 PF01743 Poly A polymerase head domain CIW72_13110 PF12627 Probable RNA and SrmB- binding site of polymerase A CIW72_13120 PF02649 Type I GTP cyclohydrolase folE2 CIW72_13125 PF01520 N-acetylmuramoyl-L-alanine amidase CIW72_13145 PF00083 Sugar (and other) transporter CIW72_13155 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CIW72_13155 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CIW72_13165 PF17137 Domain of unknown function (DUF5110) CIW72_13165 PF01055 Glycosyl hydrolases family 31 CIW72_13165 PF16338 Domain of unknown function (DUF4968) CIW72_13180 PF00942 Cellulose binding domain CIW72_13180 PF03442 Carbohydrate binding domain X2 CIW72_13195 PF03466 LysR substrate binding domain CIW72_13195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW72_13205 PF01081 KDPG and KHG aldolase CIW72_13210 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CIW72_13210 PF13378 Enolase C-terminal domain-like CIW72_13215 PF08450 SMP-30/Gluconolactonase/LRE-like region CIW72_13220 PF05035 2-keto-3-deoxy-galactonokinase CIW72_13225 PF11953 Domain of unknown function (DUF3470) CIW72_13225 PF00037 4Fe-4S binding domain CIW72_13235 PF00701 Dihydrodipicolinate synthetase family CIW72_13250 PF00578 AhpC/TSA family CIW72_13255 PF02562 PhoH-like protein CIW72_13255 PF13638 PIN domain CIW72_13270 PF08543 Phosphomethylpyrimidine kinase CIW72_13310 PF03466 LysR substrate binding domain CIW72_13310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW72_13315 PF17954 Quercetinase C-terminal cupin domain CIW72_13315 PF02678 Pirin CIW72_13320 PF13426 PAS domain CIW72_13320 PF08447 PAS fold CIW72_13320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW72_13335 PF02599 Global regulator protein family CIW72_13340 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CIW72_13340 PF01411 tRNA synthetases class II (A) CIW72_13340 PF02272 DHHA1 domain CIW72_13345 PF02631 RecX family CIW72_13355 PF00154 recA bacterial DNA recombination protein CIW72_13360 PF00717 Peptidase S24-like CIW72_13360 PF01726 LexA DNA binding domain CIW72_13365 PF03109 ABC1 family CIW72_13370 PF02464 Competence-damaged protein CIW72_13375 PF13167 GTP-binding GTPase N-terminal CIW72_13375 PF16360 GTP-binding GTPase Middle Region CIW72_13375 PF01926 50S ribosome-binding GTPase CIW72_13380 PF17209 Hfq protein CIW72_13390 PF00809 Pterin binding enzyme CIW72_13395 PF06480 FtsH Extracellular CIW72_13395 PF00004 ATPase family associated with various cellular activities (AAA) CIW72_13395 PF17862 AAA+ lid domain CIW72_13395 PF01434 Peptidase family M41 CIW72_13400 PF01728 FtsJ-like methyltransferase CIW72_13405 PF01985 CRS1 / YhbY (CRM) domain CIW72_13410 PF04430 Protein of unknown function (DUF498/DUF598) CIW72_13415 PF01551 Peptidase family M23 CIW72_13415 PF01476 LysM domain CIW72_13420 PF09335 SNARE associated Golgi protein CIW72_13430 PF01975 Survival protein SurE CIW72_13435 PF01713 Smr domain CIW72_13440 PF01142 tRNA pseudouridine synthase D (TruD) CIW72_13445 PF02542 YgbB family CIW72_13450 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CIW72_13455 PF04977 Septum formation initiator CIW72_13460 PF03952 Enolase, N-terminal domain CIW72_13460 PF00113 Enolase, C-terminal TIM barrel domain CIW72_13470 PF00793 DAHP synthetase I family CIW72_13475 PF06418 CTP synthase N-terminus CIW72_13475 PF00117 Glutamine amidotransferase class-I CIW72_13485 PF00986 DNA gyrase B subunit, carboxyl terminus CIW72_13485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_13485 PF01751 Toprim domain CIW72_13485 PF00204 DNA gyrase B CIW72_13500 PF01384 Phosphate transporter family CIW72_13515 PF03471 Transporter associated domain CIW72_13515 PF00571 CBS domain CIW72_13515 PF01595 Cyclin M transmembrane N-terminal domain CIW72_13530 PF00296 Luciferase-like monooxygenase CIW72_13535 PF07690 Major Facilitator Superfamily CIW72_13540 PF00664 ABC transporter transmembrane region CIW72_13540 PF00005 ABC transporter CIW72_13545 PF00005 ABC transporter CIW72_13585 PF08241 Methyltransferase domain CIW72_13600 PF00535 Glycosyl transferase family 2 CIW72_13605 PF01943 Polysaccharide biosynthesis protein CIW72_13610 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CIW72_13630 PF05523 WxcM-like, C-terminal CIW72_13645 PF00034 Cytochrome c CIW72_13705 PF08281 Sigma-70, region 4 CIW72_13705 PF04542 Sigma-70 region 2 CIW72_13715 PF00082 Subtilase family CIW72_13720 PF01578 Cytochrome C assembly protein CIW72_13730 PF03100 CcmE CIW72_13735 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CIW72_13735 PF01578 Cytochrome C assembly protein CIW72_13740 PF08534 Redoxin CIW72_13745 PF03918 Cytochrome C biogenesis protein CIW72_13755 PF00072 Response regulator receiver domain CIW72_13755 PF13426 PAS domain CIW72_13755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_13765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_13765 PF00072 Response regulator receiver domain CIW72_13765 PF00672 HAMP domain CIW72_13765 PF00512 His Kinase A (phospho-acceptor) domain CIW72_13765 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CIW72_13765 PF01627 Hpt domain CIW72_13785 PF01494 FAD binding domain CIW72_13790 PF02203 Tar ligand binding domain homologue CIW72_13790 PF00672 HAMP domain CIW72_13790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW72_13805 PF03466 LysR substrate binding domain CIW72_13805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW72_13810 PF02525 Flavodoxin-like fold CIW72_13815 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CIW72_13815 PF02403 Seryl-tRNA synthetase N-terminal domain CIW72_13820 PF03544 Gram-negative bacterial TonB protein C-terminal CIW72_13830 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CIW72_13835 PF00800 Prephenate dehydratase CIW72_13835 PF01842 ACT domain CIW72_13835 PF01817 Chorismate mutase type II CIW72_13840 PF00266 Aminotransferase class-V CIW72_13845 PF00174 Oxidoreductase molybdopterin binding domain CIW72_13850 PF01794 Ferric reductase like transmembrane component CIW72_13875 PF00392 Bacterial regulatory proteins, gntR family CIW72_13875 PF07702 UTRA domain CIW72_13890 PF07969 Amidohydrolase family CIW72_13895 PF00221 Aromatic amino acid lyase CIW72_13905 PF17391 Urocanase N-terminal domain CIW72_13905 PF17392 Urocanase C-terminal domain CIW72_13905 PF01175 Urocanase Rossmann-like domain CIW72_13915 PF13360 PQQ-like domain CIW72_13920 PF03989 DNA gyrase C-terminal domain, beta-propeller CIW72_13920 PF00521 DNA gyrase/topoisomerase IV, subunit A CIW72_13925 PF01008 Initiation factor 2 subunit family CIW72_13940 PF00152 tRNA synthetases class II (D, K and N) CIW72_13945 PF12826 Helix-hairpin-helix motif CIW72_13945 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CIW72_13945 PF03120 NAD-dependent DNA ligase OB-fold domain CIW72_13945 PF00533 BRCA1 C Terminus (BRCT) domain CIW72_13945 PF01653 NAD-dependent DNA ligase adenylation domain CIW72_13950 PF00155 Aminotransferase class I and II CIW72_13960 PF04354 ZipA, C-terminal FtsZ-binding domain CIW72_13965 PF02463 RecF/RecN/SMC N terminal domain CIW72_13970 PF01281 Ribosomal protein L9, N-terminal domain CIW72_13970 PF03948 Ribosomal protein L9, C-terminal domain CIW72_13975 PF01084 Ribosomal protein S18 CIW72_13980 PF01250 Ribosomal protein S6 CIW72_13985 PF01521 Iron-sulphur cluster biosynthesis CIW72_13995 PF01336 OB-fold nucleic acid binding domain CIW72_13995 PF00152 tRNA synthetases class II (D, K and N) CIW72_14015 PF04299 Putative FMN-binding domain CIW72_14035 PF00072 Response regulator receiver domain CIW72_14035 PF00196 Bacterial regulatory proteins, luxR family CIW72_14090 PF00484 Carbonic anhydrase CIW72_14095 PF06052 3-hydroxyanthranilic acid dioxygenase CIW72_14105 PF00266 Aminotransferase class-V CIW72_14110 PF01494 FAD binding domain CIW72_14115 PF08411 Exonuclease C-terminal CIW72_14115 PF00929 Exonuclease CIW72_14140 PF01513 ATP-NAD kinase CIW72_14145 PF02926 THUMP domain CIW72_14145 PF10672 S-adenosylmethionine-dependent methyltransferase CIW72_14145 PF01170 Putative RNA methylase family UPF0020 CIW72_14185 PF00581 Rhodanese-like domain CIW72_14190 PF00293 NUDIX domain CIW72_14195 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CIW72_14195 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CIW72_14200 PF00378 Enoyl-CoA hydratase/isomerase CIW72_14210 PF00730 HhH-GPD superfamily base excision DNA repair protein CIW72_14210 PF00633 Helix-hairpin-helix motif CIW72_14210 PF10576 Iron-sulfur binding domain of endonuclease III CIW72_14215 PF00916 Sulfate permease family CIW72_14215 PF01740 STAS domain CIW72_14220 PF00484 Carbonic anhydrase CIW72_14235 PF12849 PBP superfamily domain CIW72_14240 PF12849 PBP superfamily domain CIW72_14245 PF00528 Binding-protein-dependent transport system inner membrane component CIW72_14250 PF00528 Binding-protein-dependent transport system inner membrane component CIW72_14255 PF00005 ABC transporter CIW72_14260 PF01895 PhoU domain CIW72_14270 PF00929 Exonuclease CIW72_14275 PF00990 Diguanylate cyclase, GGDEF domain CIW72_14275 PF07694 5TMR of 5TMR-LYT CIW72_14280 PF08032 RNA 2'-O ribose methyltransferase substrate binding CIW72_14280 PF00588 SpoU rRNA Methylase family CIW72_14290 PF08206 Ribonuclease B OB domain CIW72_14290 PF00773 RNB domain CIW72_14290 PF00575 S1 RNA binding domain CIW72_14290 PF08461 Ribonuclease R winged-helix domain CIW72_14290 PF17876 Cold shock domain CIW72_14310 PF02770 Acyl-CoA dehydrogenase, middle domain CIW72_14310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CIW72_14310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CIW72_14315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CIW72_14315 PF02770 Acyl-CoA dehydrogenase, middle domain CIW72_14315 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CIW72_14330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CIW72_14330 PF02770 Acyl-CoA dehydrogenase, middle domain CIW72_14330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CIW72_14335 PF01209 ubiE/COQ5 methyltransferase family CIW72_14340 PF00809 Pterin binding enzyme CIW72_14340 PF02574 Homocysteine S-methyltransferase CIW72_14355 PF00294 pfkB family carbohydrate kinase CIW72_14360 PF07690 Major Facilitator Superfamily CIW72_14365 PF00356 Bacterial regulatory proteins, lacI family CIW72_14380 PF04102 SlyX CIW72_14385 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CIW72_14385 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CIW72_14385 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CIW72_14390 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CIW72_14390 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CIW72_14395 PF00255 Glutathione peroxidase CIW72_14405 PF00392 Bacterial regulatory proteins, gntR family CIW72_14410 PF00005 ABC transporter CIW72_14435 PF00206 Lyase CIW72_14435 PF10415 Fumarase C C-terminus CIW72_14440 PF03471 Transporter associated domain CIW72_14440 PF01595 Cyclin M transmembrane N-terminal domain CIW72_14440 PF00571 CBS domain CIW72_14450 PF00206 Lyase CIW72_14450 PF08328 Adenylosuccinate lyase C-terminal CIW72_14460 PF08007 Cupin superfamily protein CIW72_14470 PF16870 2-oxoglutarate dehydrogenase C-terminal CIW72_14470 PF02779 Transketolase, pyrimidine binding domain CIW72_14470 PF16078 2-oxoglutarate dehydrogenase N-terminus CIW72_14470 PF00676 Dehydrogenase E1 component CIW72_14475 PF02817 e3 binding domain CIW72_14475 PF00364 Biotin-requiring enzyme CIW72_14475 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CIW72_14480 PF07992 Pyridine nucleotide-disulphide oxidoreductase CIW72_14480 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CIW72_14485 PF03641 Possible lysine decarboxylase CIW72_14490 PF01205 Uncharacterized protein family UPF0029 CIW72_14495 PF00664 ABC transporter transmembrane region CIW72_14495 PF00005 ABC transporter CIW72_14500 PF03466 LysR substrate binding domain CIW72_14500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW72_14505 PF00664 ABC transporter transmembrane region CIW72_14505 PF00005 ABC transporter CIW72_14505 PF03412 Peptidase C39 family CIW72_14530 PF08543 Phosphomethylpyrimidine kinase CIW72_14540 PF00226 DnaJ domain CIW72_14540 PF01556 DnaJ C terminal domain CIW72_14540 PF00684 DnaJ central domain CIW72_14545 PF00012 Hsp70 protein CIW72_14550 PF01025 GrpE CIW72_14555 PF01628 HrcA protein C terminal domain CIW72_14555 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding CIW72_14560 PF02463 RecF/RecN/SMC N terminal domain CIW72_14565 PF01475 Ferric uptake regulator family CIW72_14570 PF04355 SmpA / OmlA family CIW72_14575 PF03658 RnfH family Ubiquitin CIW72_14580 PF03364 Polyketide cyclase / dehydrase and lipid transport CIW72_14585 PF01668 SmpB protein CIW72_14590 PF00082 Subtilase family CIW72_14640 PF00990 Diguanylate cyclase, GGDEF domain CIW72_14650 PF08448 PAS fold CIW72_14650 PF00990 Diguanylate cyclase, GGDEF domain CIW72_14655 PF02321 Outer membrane efflux protein CIW72_14660 PF00106 short chain dehydrogenase CIW72_14665 PF00873 AcrB/AcrD/AcrF family CIW72_14670 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CIW72_14685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW72_14685 PF03466 LysR substrate binding domain CIW72_14690 PF00691 OmpA family CIW72_14690 PF05736 OprF membrane domain CIW72_14700 PF03441 FAD binding domain of DNA photolyase CIW72_14700 PF00875 DNA photolyase CIW72_14705 PF03796 DnaB-like helicase C terminal domain CIW72_14705 PF00772 DnaB-like helicase N terminal domain CIW72_14710 PF03358 NADPH-dependent FMN reductase CIW72_14715 PF13537 Glutamine amidotransferase domain CIW72_14715 PF00733 Asparagine synthase CIW72_14725 PF00043 Glutathione S-transferase, C-terminal domain CIW72_14725 PF02798 Glutathione S-transferase, N-terminal domain CIW72_14735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CIW72_14735 PF02770 Acyl-CoA dehydrogenase, middle domain CIW72_14735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CIW72_14750 PF01026 TatD related DNase CIW72_14755 PF00899 ThiF family CIW72_14770 PF00313 'Cold-shock' DNA-binding domain CIW72_14780 PF02253 Phospholipase A1 CIW72_14785 PF00484 Carbonic anhydrase CIW72_14795 PF05683 Fumarase C-terminus CIW72_14795 PF05681 Fumarate hydratase (Fumerase) CIW72_14800 PF00005 ABC transporter CIW72_14805 PF00175 Oxidoreductase NAD-binding domain CIW72_14805 PF00970 Oxidoreductase FAD-binding domain CIW72_14810 PF00255 Glutathione peroxidase CIW72_14820 PF01432 Peptidase family M3 CIW72_14825 PF12802 MarR family CIW72_14850 PF00854 POT family CIW72_14860 PF01915 Glycosyl hydrolase family 3 C-terminal domain CIW72_14860 PF00933 Glycosyl hydrolase family 3 N terminal domain CIW72_14860 PF14310 Fibronectin type III-like domain CIW72_14870 PF07690 Major Facilitator Superfamily CIW72_14875 PF00529 HlyD membrane-fusion protein of T1SS CIW72_14875 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CIW72_14880 PF02321 Outer membrane efflux protein CIW72_14895 PF03989 DNA gyrase C-terminal domain, beta-propeller CIW72_14895 PF00521 DNA gyrase/topoisomerase IV, subunit A CIW72_14900 PF05724 Thiopurine S-methyltransferase (TPMT) CIW72_14905 PF00210 Ferritin-like domain CIW72_14910 PF01804 Penicillin amidase CIW72_14920 PF00593 TonB dependent receptor CIW72_14920 PF07715 TonB-dependent Receptor Plug Domain CIW72_14930 PF13537 Glutamine amidotransferase domain CIW72_14930 PF00733 Asparagine synthase CIW72_14935 PF07687 Peptidase dimerisation domain CIW72_14935 PF01546 Peptidase family M20/M25/M40 CIW72_14940 PF03960 ArsC family CIW72_14945 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CIW72_14945 PF14602 Hexapeptide repeat of succinyl-transferase CIW72_14945 PF00132 Bacterial transferase hexapeptide (six repeats) CIW72_14950 PF01966 HD domain CIW72_14950 PF08335 GlnD PII-uridylyltransferase CIW72_14950 PF01909 Nucleotidyltransferase domain CIW72_14955 PF00557 Metallopeptidase family M24 CIW72_14990 PF00318 Ribosomal protein S2 CIW72_14995 PF00889 Elongation factor TS CIW72_15000 PF00990 Diguanylate cyclase, GGDEF domain CIW72_15000 PF00072 Response regulator receiver domain CIW72_15005 PF00696 Amino acid kinase family CIW72_15010 PF01765 Ribosome recycling factor CIW72_15015 PF01255 Putative undecaprenyl diphosphate synthase CIW72_15025 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CIW72_15025 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CIW72_15025 PF13288 DXP reductoisomerase C-terminal domain CIW72_15030 PF17820 PDZ domain CIW72_15030 PF02163 Peptidase family M50 CIW72_15035 PF01103 Surface antigen CIW72_15035 PF07244 Surface antigen variable number repeat CIW72_15045 PF00132 Bacterial transferase hexapeptide (six repeats) CIW72_15045 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CIW72_15050 PF07977 FabA-like domain CIW72_15055 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CIW72_15055 PF00132 Bacterial transferase hexapeptide (six repeats) CIW72_15060 PF02684 Lipid-A-disaccharide synthetase CIW72_15065 PF01351 Ribonuclease HII CIW72_15070 PF07733 Bacterial DNA polymerase III alpha NTPase domain CIW72_15070 PF14579 Helix-hairpin-helix motif CIW72_15070 PF02811 PHP domain CIW72_15070 PF01336 OB-fold nucleic acid binding domain CIW72_15070 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CIW72_15075 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CIW72_15110 PF03551 Transcriptional regulator PadR-like family CIW72_15130 PF02592 Putative vitamin uptake transporter CIW72_15140 PF02574 Homocysteine S-methyltransferase CIW72_15145 PF00324 Amino acid permease CIW72_15150 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CIW72_15155 PF00005 ABC transporter CIW72_15155 PF13732 Domain of unknown function (DUF4162) CIW72_15170 PF01588 Putative tRNA binding domain CIW72_15170 PF09334 tRNA synthetases class I (M) CIW72_15180 PF04060 Putative Fe-S cluster CIW72_15195 PF04545 Sigma-70, region 4 CIW72_15195 PF04542 Sigma-70 region 2 CIW72_15240 PF01042 Endoribonuclease L-PSP CIW72_15250 PF03706 Lysylphosphatidylglycerol synthase TM region CIW72_15250 PF09924 Uncharacterised conserved protein (DUF2156) CIW72_15285 PF07690 Major Facilitator Superfamily CIW72_15295 PF03831 PhnA domain CIW72_15295 PF08274 PhnA Zinc-Ribbon CIW72_15305 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CIW72_15325 PF01258 Prokaryotic dksA/traR C4-type zinc finger CIW72_15335 PF07043 Protein of unknown function (DUF1328) CIW72_15340 PF01863 Protein of unknown function DUF45 CIW72_15355 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CIW72_15355 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CIW72_15360 PF00082 Subtilase family CIW72_15360 PF03797 Autotransporter beta-domain CIW72_15360 PF12951 Passenger-associated-transport-repeat CIW72_15365 PF02803 Thiolase, C-terminal domain CIW72_15365 PF00108 Thiolase, N-terminal domain CIW72_15385 PF00072 Response regulator receiver domain CIW72_15385 PF00990 Diguanylate cyclase, GGDEF domain CIW72_15400 PF04675 DNA ligase N terminus CIW72_15400 PF01068 ATP dependent DNA ligase domain CIW72_15400 PF04679 ATP dependent DNA ligase C terminal region CIW72_15410 PF04679 ATP dependent DNA ligase C terminal region CIW72_15410 PF01068 ATP dependent DNA ligase domain CIW72_15410 PF04675 DNA ligase N terminus CIW72_15415 PF00271 Helicase conserved C-terminal domain CIW72_15415 PF08494 DEAD/H associated CIW72_15415 PF00270 DEAD/DEAH box helicase CIW72_15425 PF01494 FAD binding domain CIW72_15430 PF00313 'Cold-shock' DNA-binding domain CIW72_15435 PF01048 Phosphorylase superfamily CIW72_15445 PF00933 Glycosyl hydrolase family 3 N terminal domain CIW72_15450 PF04244 Deoxyribodipyrimidine photo-lyase-related protein CIW72_15460 PF01323 DSBA-like thioredoxin domain CIW72_15470 PF05958 tRNA (Uracil-5-)-methyltransferase CIW72_15480 PF02565 Recombination protein O C terminal CIW72_15480 PF11967 Recombination protein O N terminal CIW72_15485 PF07650 KH domain CIW72_15485 PF01926 50S ribosome-binding GTPase CIW72_15490 PF14622 Ribonuclease-III-like CIW72_15490 PF00035 Double-stranded RNA binding motif CIW72_15500 PF10502 Signal peptidase, peptidase S26 CIW72_15505 PF00009 Elongation factor Tu GTP binding domain CIW72_15505 PF06421 GTP-binding protein LepA C-terminus CIW72_15505 PF03144 Elongation factor Tu domain 2 CIW72_15505 PF00679 Elongation factor G C-terminus CIW72_15510 PF13180 PDZ domain CIW72_15520 PF04542 Sigma-70 region 2 CIW72_15520 PF08281 Sigma-70, region 4 CIW72_15525 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CIW72_15525 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CIW72_15525 PF00378 Enoyl-CoA hydratase/isomerase CIW72_15530 PF01545 Cation efflux family CIW72_15535 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CIW72_15535 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CIW72_15540 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CIW72_15540 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CIW72_15540 PF00378 Enoyl-CoA hydratase/isomerase CIW72_15545 PF00378 Enoyl-CoA hydratase/isomerase CIW72_15550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CIW72_15550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CIW72_15550 PF02770 Acyl-CoA dehydrogenase, middle domain CIW72_15555 PF00171 Aldehyde dehydrogenase family CIW72_15560 PF06114 IrrE N-terminal-like domain CIW72_15560 PF01381 Helix-turn-helix CIW72_15560 PF09856 Predicted transcriptional regulator (DUF2083) CIW72_15570 PF07745 Glycosyl hydrolase family 53 CIW72_15635 PF01624 MutS domain I CIW72_15635 PF05188 MutS domain II CIW72_15635 PF05192 MutS domain III CIW72_15635 PF05190 MutS family domain IV CIW72_15635 PF00488 MutS domain V CIW72_15645 PF00141 Peroxidase CIW72_15650 PF01479 S4 domain CIW72_15665 PF01554 MatE CIW72_15670 PF01245 Ribosomal protein L19 CIW72_15675 PF01746 tRNA (Guanine-1)-methyltransferase CIW72_15680 PF01782 RimM N-terminal domain CIW72_15680 PF05239 PRC-barrel domain CIW72_15685 PF00886 Ribosomal protein S16 CIW72_15690 PF01063 Amino-transferase class IV CIW72_15695 PF03060 Nitronate monooxygenase CIW72_15700 PF00448 SRP54-type protein, GTPase domain CIW72_15700 PF02978 Signal peptide binding domain CIW72_15700 PF02881 SRP54-type protein, helical bundle domain CIW72_15705 PF01578 Cytochrome C assembly protein CIW72_15710 PF01263 Aldose 1-epimerase CIW72_15715 PF06964 Alpha-L-arabinofuranosidase C-terminal domain CIW72_15725 PF00072 Response regulator receiver domain CIW72_15730 PF13426 PAS domain CIW72_15730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_15730 PF00072 Response regulator receiver domain CIW72_15735 PF01627 Hpt domain CIW72_15735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_15735 PF00672 HAMP domain CIW72_15735 PF00512 His Kinase A (phospho-acceptor) domain CIW72_15735 PF00072 Response regulator receiver domain CIW72_15735 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CIW72_15740 PF03705 CheR methyltransferase, all-alpha domain CIW72_15740 PF01739 CheR methyltransferase, SAM binding domain CIW72_15745 PF01339 CheB methylesterase CIW72_15750 PF00990 Diguanylate cyclase, GGDEF domain CIW72_15750 PF00072 Response regulator receiver domain CIW72_15755 PF07237 Protein of unknown function (DUF1428) CIW72_15760 PF00085 Thioredoxin CIW72_15765 PF07715 TonB-dependent Receptor Plug Domain CIW72_15765 PF00593 TonB dependent receptor CIW72_15770 PF04616 Glycosyl hydrolases family 43 CIW72_15770 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CIW72_15775 PF00512 His Kinase A (phospho-acceptor) domain CIW72_15775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_15775 PF08448 PAS fold CIW72_15775 PF13188 PAS domain CIW72_15775 PF00072 Response regulator receiver domain CIW72_15780 PF00672 HAMP domain CIW72_15780 PF00072 Response regulator receiver domain CIW72_15780 PF01627 Hpt domain CIW72_15780 PF00512 His Kinase A (phospho-acceptor) domain CIW72_15780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_15780 PF17149 Periplasmic sensor domain found in signal transduction proteins CIW72_15790 PF13581 Histidine kinase-like ATPase domain CIW72_15795 PF01740 STAS domain CIW72_15800 PF01740 STAS domain CIW72_15800 PF08678 Rsbr N terminal CIW72_15815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_15815 PF00183 Hsp90 protein CIW72_15820 PF12833 Helix-turn-helix domain CIW72_15830 PF05656 Protein of unknown function (DUF805) CIW72_15835 PF18073 Rubredoxin metal binding domain CIW72_15845 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CIW72_15850 PF00510 Cytochrome c oxidase subunit III CIW72_15855 PF00115 Cytochrome C and Quinol oxidase polypeptide I CIW72_15865 PF00589 Phage integrase family CIW72_15895 PF13087 AAA domain CIW72_15895 PF13091 PLD-like domain CIW72_15900 PF03389 MobA/MobL family CIW72_15990 PF02401 LytB protein CIW72_15995 PF01252 Signal peptidase (SPase) II CIW72_16000 PF08264 Anticodon-binding domain of tRNA CIW72_16000 PF06827 Zinc finger found in FPG and IleRS CIW72_16000 PF00133 tRNA synthetases class I (I, L, M and V) CIW72_16005 PF01687 Riboflavin kinase CIW72_16005 PF06574 FAD synthetase CIW72_16010 PF03023 Lipid II flippase MurJ CIW72_16015 PF01649 Ribosomal protein S20 CIW72_16020 PF01018 GTP1/OBG CIW72_16020 PF01926 50S ribosome-binding GTPase CIW72_16025 PF01016 Ribosomal L27 protein CIW72_16030 PF00829 Ribosomal prokaryotic L21 protein CIW72_16035 PF00005 ABC transporter CIW72_16035 PF17755 UvrA DNA-binding domain CIW72_16035 PF17760 UvrA interaction domain CIW72_16050 PF00378 Enoyl-CoA hydratase/isomerase CIW72_16080 PF04377 Arginine-tRNA-protein transferase, C terminus CIW72_16080 PF04376 Arginine-tRNA-protein transferase, N terminus CIW72_16090 PF02222 ATP-grasp domain CIW72_16125 PF00730 HhH-GPD superfamily base excision DNA repair protein CIW72_16140 PF00196 Bacterial regulatory proteins, luxR family CIW72_16140 PF00072 Response regulator receiver domain CIW72_16145 PF07730 Histidine kinase CIW72_16160 PF03775 Septum formation inhibitor MinC, C-terminal domain CIW72_16160 PF05209 Septum formation inhibitor MinC, N-terminal domain CIW72_16165 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CIW72_16170 PF03776 Septum formation topological specificity factor MinE CIW72_16180 PF00512 His Kinase A (phospho-acceptor) domain CIW72_16180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_16180 PF08521 Two-component sensor kinase N-terminal CIW72_16185 PF00486 Transcriptional regulatory protein, C terminal CIW72_16185 PF00072 Response regulator receiver domain CIW72_16200 PF08019 Phosphoethanolamine transferase EptA/EptB CIW72_16200 PF00884 Sulfatase CIW72_16215 PF07690 Major Facilitator Superfamily CIW72_16220 PF02347 Glycine cleavage system P-protein CIW72_16225 PF00135 Carboxylesterase family CIW72_16230 PF00248 Aldo/keto reductase family CIW72_16235 PF00199 Catalase CIW72_16235 PF06628 Catalase-related immune-responsive CIW72_16235 PF18011 C-terminal domain found in long catalases CIW72_16270 PF02311 AraC-like ligand binding domain CIW72_16270 PF12833 Helix-turn-helix domain CIW72_16310 PF03169 OPT oligopeptide transporter protein CIW72_16320 PF00326 Prolyl oligopeptidase family CIW72_16330 PF07733 Bacterial DNA polymerase III alpha NTPase domain CIW72_16330 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CIW72_16330 PF14579 Helix-hairpin-helix motif CIW72_16330 PF02811 PHP domain CIW72_16345 PF00717 Peptidase S24-like CIW72_16345 PF01726 LexA DNA binding domain CIW72_16380 PF00111 2Fe-2S iron-sulfur cluster binding domain CIW72_16380 PF01799 [2Fe-2S] binding domain CIW72_16385 PF00941 FAD binding domain in molybdopterin dehydrogenase CIW72_16385 PF03450 CO dehydrogenase flavoprotein C-terminal domain CIW72_16395 PF17755 UvrA DNA-binding domain CIW72_16415 PF07992 Pyridine nucleotide-disulphide oxidoreductase CIW72_16425 PF00106 short chain dehydrogenase CIW72_16430 PF17678 Glycosyl hydrolase family 92 N-terminal domain CIW72_16430 PF07971 Glycosyl hydrolase family 92 CIW72_16470 PF01555 DNA methylase CIW72_16485 PF00271 Helicase conserved C-terminal domain CIW72_16485 PF00176 SNF2 family N-terminal domain CIW72_16510 PF00440 Bacterial regulatory proteins, tetR family CIW72_16525 PF11838 ERAP1-like C-terminal domain CIW72_16525 PF01433 Peptidase family M1 domain CIW72_16530 PF00709 Adenylosuccinate synthetase CIW72_16540 PF01145 SPFH domain / Band 7 family CIW72_16545 PF01145 SPFH domain / Band 7 family CIW72_16545 PF12221 Bacterial membrane protein N terminal CIW72_16550 PF00072 Response regulator receiver domain CIW72_16555 PF00226 DnaJ domain CIW72_16555 PF01556 DnaJ C terminal domain CIW72_16565 PF08534 Redoxin CIW72_16575 PF00912 Transglycosylase CIW72_16575 PF00905 Penicillin binding protein transpeptidase domain CIW72_16575 PF06832 Penicillin-Binding Protein C-terminus Family CIW72_16605 PF04303 PrpF protein CIW72_16625 PF00330 Aconitase family (aconitate hydratase) CIW72_16625 PF00694 Aconitase C-terminal domain CIW72_16630 PF00285 Citrate synthase, C-terminal domain CIW72_16640 PF00158 Sigma-54 interaction domain CIW72_16640 PF06506 Propionate catabolism activator CIW72_16640 PF02954 Bacterial regulatory protein, Fis family CIW72_16660 PF09115 DNA polymerase III, delta subunit, C terminal CIW72_16665 PF02618 YceG-like family CIW72_16670 PF00425 chorismate binding enzyme CIW72_16670 PF04715 Anthranilate synthase component I, N terminal region CIW72_16675 PF00109 Beta-ketoacyl synthase, N-terminal domain CIW72_16675 PF02801 Beta-ketoacyl synthase, C-terminal domain CIW72_16680 PF00550 Phosphopantetheine attachment site CIW72_16690 PF00698 Acyl transferase domain CIW72_16700 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CIW72_16700 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CIW72_16705 PF01783 Ribosomal L32p protein family CIW72_16710 PF02620 Large ribosomal RNA subunit accumulation protein YceD CIW72_16715 PF02545 Maf-like protein CIW72_16735 PF07726 ATPase family associated with various cellular activities (AAA) CIW72_16735 PF17863 AAA lid domain CIW72_16745 PF13559 Domain of unknown function (DUF4129) CIW72_16745 PF01841 Transglutaminase-like superfamily CIW72_16745 PF11992 Domain of unknown function (DUF3488) CIW72_16755 PF01230 HIT domain CIW72_16760 PF02132 RecR protein CIW72_16760 PF13662 Toprim domain CIW72_16765 PF02575 YbaB/EbfC DNA-binding family CIW72_16770 PF12169 DNA polymerase III subunits gamma and tau domain III CIW72_16770 PF12170 DNA polymerase III tau subunit V interacting with alpha CIW72_16785 PF02391 MoaE protein CIW72_16790 PF02597 ThiS family CIW72_16795 PF01967 MoaC family CIW72_16800 PF06463 Molybdenum Cofactor Synthesis C CIW72_16800 PF04055 Radical SAM superfamily CIW72_16805 PF12706 Beta-lactamase superfamily domain CIW72_16805 PF00753 Metallo-beta-lactamase superfamily CIW72_16815 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CIW72_16835 PF00929 Exonuclease CIW72_16840 PF00075 RNase H CIW72_16850 PF16123 Hydroxyacylglutathione hydrolase C-terminus CIW72_16850 PF00753 Metallo-beta-lactamase superfamily CIW72_16855 PF05257 CHAP domain CIW72_16855 PF01476 LysM domain CIW72_16880 PF00216 Bacterial DNA-binding protein CIW72_16885 PF02190 ATP-dependent protease La (LON) substrate-binding domain CIW72_16885 PF05362 Lon protease (S16) C-terminal proteolytic domain CIW72_16885 PF00004 ATPase family associated with various cellular activities (AAA) CIW72_16890 PF10431 C-terminal, D2-small domain, of ClpB protein CIW72_16890 PF07724 AAA domain (Cdc48 subfamily) CIW72_16890 PF06689 ClpX C4-type zinc finger CIW72_16895 PF00574 Clp protease CIW72_16900 PF05697 Bacterial trigger factor protein (TF) CIW72_16900 PF05698 Bacterial trigger factor protein (TF) C-terminus CIW72_16910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_16910 PF00989 PAS fold CIW72_16910 PF00512 His Kinase A (phospho-acceptor) domain CIW72_16915 PF00072 Response regulator receiver domain CIW72_16915 PF01339 CheB methylesterase CIW72_17025 PF00145 C-5 cytosine-specific DNA methylase CIW72_17030 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA CIW72_17095 PF03797 Autotransporter beta-domain CIW72_17095 PF00657 GDSL-like Lipase/Acylhydrolase CIW72_17105 PF05690 Thiazole biosynthesis protein ThiG CIW72_17115 PF02390 Putative methyltransferase CIW72_17120 PF02080 TrkA-C domain CIW72_17120 PF03600 Citrate transporter CIW72_17140 PF01557 Fumarylacetoacetate (FAA) hydrolase family CIW72_17145 PF01741 Large-conductance mechanosensitive channel, MscL CIW72_17155 PF00356 Bacterial regulatory proteins, lacI family CIW72_17165 PF02837 Glycosyl hydrolases family 2, sugar binding domain CIW72_17165 PF00703 Glycosyl hydrolases family 2 CIW72_17165 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain CIW72_17170 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation CIW72_17170 PF14508 Glycosyl-hydrolase 97 N-terminal CIW72_17170 PF10566 Glycoside hydrolase 97 CIW72_17180 PF00135 Carboxylesterase family CIW72_17185 PF00588 SpoU rRNA Methylase family CIW72_17185 PF08032 RNA 2'-O ribose methyltransferase substrate binding CIW72_17195 PF11838 ERAP1-like C-terminal domain CIW72_17195 PF01433 Peptidase family M1 domain CIW72_17215 PF00873 AcrB/AcrD/AcrF family CIW72_17220 PF00529 HlyD membrane-fusion protein of T1SS CIW72_17220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CIW72_17225 PF00009 Elongation factor Tu GTP binding domain CIW72_17230 PF01507 Phosphoadenosine phosphosulfate reductase family CIW72_17235 PF00175 Oxidoreductase NAD-binding domain CIW72_17235 PF00258 Flavodoxin CIW72_17235 PF00667 FAD binding domain CIW72_17240 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CIW72_17240 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CIW72_17245 PF01507 Phosphoadenosine phosphosulfate reductase family CIW72_17265 PF01627 Hpt domain CIW72_17265 PF00512 His Kinase A (phospho-acceptor) domain CIW72_17265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_17265 PF00072 Response regulator receiver domain CIW72_17280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW72_17280 PF03466 LysR substrate binding domain CIW72_17285 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CIW72_17285 PF14824 Sirohaem biosynthesis protein central CIW72_17285 PF10414 Sirohaem synthase dimerisation region CIW72_17290 PF00291 Pyridoxal-phosphate dependent enzyme CIW72_17300 PF01661 Macro domain CIW72_17305 PF00274 Fructose-bisphosphate aldolase class-I CIW72_17315 PF02887 Pyruvate kinase, alpha/beta domain CIW72_17315 PF00224 Pyruvate kinase, barrel domain CIW72_17325 PF00162 Phosphoglycerate kinase CIW72_17350 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CIW72_17350 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CIW72_17360 PF03922 OmpW family CIW72_17365 PF03922 OmpW family CIW72_17375 PF04273 Putative phosphatase (DUF442) CIW72_17375 PF00753 Metallo-beta-lactamase superfamily CIW72_17385 PF00528 Binding-protein-dependent transport system inner membrane component CIW72_17390 PF00005 ABC transporter CIW72_17390 PF03459 TOBE domain CIW72_17425 PF01476 LysM domain CIW72_17425 PF03734 L,D-transpeptidase catalytic domain CIW72_17430 PF04225 Opacity-associated protein A LysM-like domain CIW72_17430 PF01551 Peptidase family M23 CIW72_17445 PF07715 TonB-dependent Receptor Plug Domain CIW72_17445 PF00593 TonB dependent receptor CIW72_17455 PF02780 Transketolase, C-terminal domain CIW72_17455 PF02779 Transketolase, pyrimidine binding domain CIW72_17455 PF00456 Transketolase, thiamine diphosphate binding domain CIW72_17460 PF00375 Sodium:dicarboxylate symporter family CIW72_17475 PF07584 Aerotolerance regulator N-terminal CIW72_17475 PF00092 von Willebrand factor type A domain CIW72_17495 PF17863 AAA lid domain CIW72_17495 PF07726 ATPase family associated with various cellular activities (AAA) CIW72_17505 PF07660 Secretin and TonB N terminus short domain CIW72_17505 PF11741 AMIN domain CIW72_17505 PF00263 Bacterial type II and III secretion system protein CIW72_17505 PF03958 Bacterial type II/III secretion system short domain CIW72_17530 PF17092 Penicillin-binding protein OB-like domain CIW72_17530 PF00912 Transglycosylase CIW72_17530 PF00905 Penicillin binding protein transpeptidase domain CIW72_17540 PF00285 Citrate synthase, C-terminal domain CIW72_17545 PF01197 Ribosomal protein L31 CIW72_17550 PF01156 Inosine-uridine preferring nucleoside hydrolase CIW72_17555 PF17191 RecG wedge domain CIW72_17555 PF00271 Helicase conserved C-terminal domain CIW72_17555 PF00270 DEAD/DEAH box helicase CIW72_17560 PF01042 Endoribonuclease L-PSP CIW72_17565 PF02824 TGS domain CIW72_17565 PF04607 Region found in RelA / SpoT proteins CIW72_17565 PF13291 ACT domain CIW72_17570 PF01192 RNA polymerase Rpb6 CIW72_17575 PF00625 Guanylate kinase CIW72_17580 PF08340 Domain of unknown function (DUF1732) CIW72_17580 PF03755 YicC-like family, N-terminal region CIW72_17585 PF03725 3' exoribonuclease family, domain 2 CIW72_17585 PF01138 3' exoribonuclease family, domain 1 CIW72_17595 PF01725 Ham1 family CIW72_17600 PF04055 Radical SAM superfamily CIW72_17600 PF06969 HemN C-terminal domain CIW72_17615 PF00557 Metallopeptidase family M24 CIW72_17625 PF00557 Metallopeptidase family M24 CIW72_17625 PF05195 Aminopeptidase P, N-terminal domain CIW72_17630 PF03695 Uncharacterised protein family (UPF0149) CIW72_17640 PF05164 Cell division protein ZapA CIW72_17650 PF01812 5-formyltetrahydrofolate cyclo-ligase family CIW72_17660 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CIW72_17670 PF13369 Transglutaminase-like superfamily CIW72_17675 PF00301 Rubredoxin CIW72_17680 PF02581 Thiamine monophosphate synthase CIW72_17695 PF00202 Aminotransferase class-III CIW72_17700 PF17874 MalT-like TPR region CIW72_17700 PF00196 Bacterial regulatory proteins, luxR family CIW72_17705 PF00127 Copper binding proteins, plastocyanin/azurin family CIW72_17710 PF00155 Aminotransferase class I and II CIW72_17720 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CIW72_17720 PF00034 Cytochrome c CIW72_17725 PF01593 Flavin containing amine oxidoreductase CIW72_17740 PF00202 Aminotransferase class-III CIW72_17745 PF00520 Ion transport protein CIW72_17745 PF00027 Cyclic nucleotide-binding domain CIW72_17760 PF01569 PAP2 superfamily CIW72_17765 PF01062 Bestrophin, RFP-TM, chloride channel CIW72_17775 PF01225 Mur ligase family, catalytic domain CIW72_17775 PF02875 Mur ligase family, glutamate ligase domain CIW72_17775 PF08245 Mur ligase middle domain CIW72_17785 PF00365 Phosphofructokinase CIW72_17795 PF03030 Inorganic H+ pyrophosphatase CIW72_17805 PF00719 Inorganic pyrophosphatase CIW72_17815 PF07715 TonB-dependent Receptor Plug Domain CIW72_17815 PF00593 TonB dependent receptor CIW72_17820 PF12833 Helix-turn-helix domain CIW72_17825 PF00486 Transcriptional regulatory protein, C terminal CIW72_17825 PF18500 CadC C-terminal domain 1 CIW72_17830 PF13667 ThiC-associated domain CIW72_17830 PF01964 Radical SAM ThiC family CIW72_17840 PF00593 TonB dependent receptor CIW72_17840 PF07715 TonB-dependent Receptor Plug Domain CIW72_17845 PF00672 HAMP domain CIW72_17845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIW72_17855 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CIW72_17855 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CIW72_17860 PF00205 Thiamine pyrophosphate enzyme, central domain CIW72_17860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CIW72_17860 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CIW72_17870 PF00291 Pyridoxal-phosphate dependent enzyme CIW72_17875 PF00682 HMGL-like CIW72_17875 PF08502 LeuA allosteric (dimerisation) domain CIW72_17880 PF00180 Isocitrate/isopropylmalate dehydrogenase CIW72_17885 PF00694 Aconitase C-terminal domain CIW72_17890 PF00330 Aconitase family (aconitate hydratase) CIW72_17895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW72_17900 PF17151 Periplasmic sensor domain CIW72_17900 PF00990 Diguanylate cyclase, GGDEF domain CIW72_17915 PF02321 Outer membrane efflux protein CIW72_17920 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CIW72_17930 PF03279 Bacterial lipid A biosynthesis acyltransferase CIW72_17955 PF01515 Phosphate acetyl/butaryl transferase CIW72_17955 PF03949 Malic enzyme, NAD binding domain CIW72_17955 PF00390 Malic enzyme, N-terminal domain CIW72_17960 PF00375 Sodium:dicarboxylate symporter family CIW72_17975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_17975 PF00512 His Kinase A (phospho-acceptor) domain CIW72_17975 PF02743 Cache domain CIW72_17980 PF07690 Major Facilitator Superfamily CIW72_17990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW72_17990 PF03466 LysR substrate binding domain CIW72_17995 PF00248 Aldo/keto reductase family CIW72_18010 PF00072 Response regulator receiver domain CIW72_18010 PF00196 Bacterial regulatory proteins, luxR family CIW72_18020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_18020 PF00512 His Kinase A (phospho-acceptor) domain CIW72_18020 PF08521 Two-component sensor kinase N-terminal CIW72_18025 PF00072 Response regulator receiver domain CIW72_18025 PF00486 Transcriptional regulatory protein, C terminal CIW72_18040 PF03600 Citrate transporter CIW72_18045 PF00106 short chain dehydrogenase CIW72_18050 PF00356 Bacterial regulatory proteins, lacI family CIW72_18065 PF00128 Alpha amylase, catalytic domain CIW72_18080 PF03193 RsgA GTPase CIW72_18125 PF00005 ABC transporter CIW72_18125 PF03412 Peptidase C39 family CIW72_18125 PF00664 ABC transporter transmembrane region CIW72_18150 PF07715 TonB-dependent Receptor Plug Domain CIW72_18150 PF00593 TonB dependent receptor CIW72_18155 PF01522 Polysaccharide deacetylase CIW72_18160 PF00462 Glutaredoxin CIW72_18175 PF01979 Amidohydrolase family CIW72_18180 PF01979 Amidohydrolase family CIW72_18205 PF02645 Uncharacterised protein, DegV family COG1307 CIW72_18210 PF01327 Polypeptide deformylase CIW72_18220 PF03960 ArsC family CIW72_18240 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) CIW72_18245 PF01270 Glycosyl hydrolases family 8 CIW72_18250 PF03170 Bacterial cellulose synthase subunit CIW72_18255 PF07238 PilZ domain CIW72_18255 PF00535 Glycosyl transferase family 2 CIW72_18255 PF03552 Cellulose synthase CIW72_18270 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CIW72_18270 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CIW72_18315 PF07715 TonB-dependent Receptor Plug Domain CIW72_18315 PF00593 TonB dependent receptor CIW72_18325 PF07702 UTRA domain CIW72_18325 PF00392 Bacterial regulatory proteins, gntR family CIW72_18335 PF03958 Bacterial type II/III secretion system short domain CIW72_18335 PF00263 Bacterial type II and III secretion system protein CIW72_18345 PF10741 Type II secretion system (T2SS), protein M subtype b CIW72_18350 PF05137 Fimbrial assembly protein (PilN) CIW72_18355 PF03934 Type II secretion system (T2SS), protein K CIW72_18365 PF07963 Prokaryotic N-terminal methylation motif CIW72_18370 PF12019 Type II transport protein GspH CIW72_18375 PF08334 Type II secretion system (T2SS), protein G CIW72_18380 PF00482 Type II secretion system (T2SS), protein F CIW72_18390 PF00437 Type II/IV secretion system protein CIW72_18390 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CIW72_18395 PF04151 Bacterial pre-peptidase C-terminal domain CIW72_18395 PF00082 Subtilase family CIW72_18405 PF04151 Bacterial pre-peptidase C-terminal domain CIW72_18405 PF00082 Subtilase family CIW72_18410 PF03895 YadA-like membrane anchor domain CIW72_18410 PF05662 Coiled stalk of trimeric autotransporter adhesin CIW72_18410 PF05658 Head domain of trimeric autotransporter adhesin CIW72_18410 PF13018 Extended Signal Peptide of Type V secretion system CIW72_18415 PF02769 AIR synthase related protein, C-terminal domain CIW72_18415 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CIW72_18415 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CIW72_18430 PF13098 Thioredoxin-like domain CIW72_18430 PF10411 Disulfide bond isomerase protein N-terminus CIW72_18445 PF02899 Phage integrase, N-terminal SAM-like domain CIW72_18445 PF00589 Phage integrase family CIW72_18460 PF03739 Lipopolysaccharide export system permease LptF/LptG CIW72_18470 PF00883 Cytosol aminopeptidase family, catalytic domain CIW72_18470 PF02789 Cytosol aminopeptidase family, N-terminal domain CIW72_18485 PF10458 Valyl tRNA synthetase tRNA binding arm CIW72_18485 PF00133 tRNA synthetases class I (I, L, M and V) CIW72_18485 PF08264 Anticodon-binding domain of tRNA CIW72_18495 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CIW72_18495 PF01464 Transglycosylase SLT domain CIW72_18500 PF00544 Pectate lyase CIW72_18515 PF01066 CDP-alcohol phosphatidyltransferase CIW72_18525 PF04073 Aminoacyl-tRNA editing domain CIW72_18525 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CIW72_18525 PF03129 Anticodon binding domain CIW72_18530 PF00816 H-NS histone family CIW72_18540 PF02405 Permease MlaE CIW72_18545 PF00005 ABC transporter CIW72_18550 PF02470 MlaD protein CIW72_18550 PF03886 ABC-type transport auxiliary lipoprotein component CIW72_18570 PF01144 Coenzyme A transferase CIW72_18575 PF01144 Coenzyme A transferase CIW72_18580 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CIW72_18580 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CIW72_18580 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CIW72_18580 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CIW72_18585 PF01050 Mannose-6-phosphate isomerase CIW72_18585 PF00483 Nucleotidyl transferase CIW72_18590 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CIW72_18590 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CIW72_18590 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CIW72_18595 PF04321 RmlD substrate binding domain CIW72_18600 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CIW72_18605 PF00483 Nucleotidyl transferase CIW72_18610 PF16363 GDP-mannose 4,6 dehydratase CIW72_18615 PF01012 Electron transfer flavoprotein domain CIW72_18620 PF01012 Electron transfer flavoprotein domain CIW72_18620 PF00766 Electron transfer flavoprotein FAD-binding domain CIW72_18630 PF00535 Glycosyl transferase family 2 CIW72_18650 PF05050 Methyltransferase FkbM domain CIW72_18660 PF16363 GDP-mannose 4,6 dehydratase CIW72_18665 PF16363 GDP-mannose 4,6 dehydratase CIW72_18670 PF00534 Glycosyl transferases group 1 CIW72_18670 PF13477 Glycosyl transferase 4-like CIW72_18675 PF00069 Protein kinase domain CIW72_18675 PF13847 Methyltransferase domain CIW72_18680 PF00005 ABC transporter CIW72_18690 PF00534 Glycosyl transferases group 1 CIW72_18690 PF13439 Glycosyltransferase Family 4 CIW72_18700 PF01053 Cys/Met metabolism PLP-dependent enzyme CIW72_18705 PF00571 CBS domain CIW72_18705 PF00291 Pyridoxal-phosphate dependent enzyme CIW72_18725 PF00437 Type II/IV secretion system protein CIW72_18730 PF14497 Glutathione S-transferase, C-terminal domain CIW72_18730 PF02798 Glutathione S-transferase, N-terminal domain CIW72_18745 PF00271 Helicase conserved C-terminal domain CIW72_18745 PF00270 DEAD/DEAH box helicase CIW72_18755 PF00593 TonB dependent receptor CIW72_18755 PF07715 TonB-dependent Receptor Plug Domain CIW72_18765 PF01242 6-pyruvoyl tetrahydropterin synthase CIW72_18780 PF13185 GAF domain CIW72_18790 PF00756 Putative esterase CIW72_18795 PF07715 TonB-dependent Receptor Plug Domain CIW72_18795 PF00593 TonB dependent receptor CIW72_18800 PF13419 Haloacid dehalogenase-like hydrolase CIW72_18805 PF11799 impB/mucB/samB family C-terminal domain CIW72_18805 PF00817 impB/mucB/samB family CIW72_18810 PF07977 FabA-like domain CIW72_18815 PF02801 Beta-ketoacyl synthase, C-terminal domain CIW72_18815 PF00109 Beta-ketoacyl synthase, N-terminal domain CIW72_18825 PF01432 Peptidase family M3 CIW72_18840 PF07731 Multicopper oxidase CIW72_18840 PF07732 Multicopper oxidase CIW72_18840 PF00394 Multicopper oxidase CIW72_18845 PF05275 Copper resistance protein B precursor (CopB) CIW72_18850 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CIW72_18875 PF01380 SIS domain CIW72_18880 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CIW72_18885 PF00005 ABC transporter CIW72_18890 PF00005 ABC transporter CIW72_18890 PF02687 FtsX-like permease family CIW72_18890 PF12704 MacB-like periplasmic core domain CIW72_18895 PF12704 MacB-like periplasmic core domain CIW72_18895 PF02687 FtsX-like permease family CIW72_18905 PF00158 Sigma-54 interaction domain CIW72_18905 PF00072 Response regulator receiver domain CIW72_18905 PF02954 Bacterial regulatory protein, Fis family CIW72_18910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_18910 PF00512 His Kinase A (phospho-acceptor) domain CIW72_18915 PF12804 MobA-like NTP transferase domain CIW72_18915 PF00132 Bacterial transferase hexapeptide (six repeats) CIW72_18915 PF14602 Hexapeptide repeat of succinyl-transferase CIW72_18930 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CIW72_18930 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CIW72_18935 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CIW72_18935 PF02874 ATP synthase alpha/beta family, beta-barrel domain CIW72_18940 PF00231 ATP synthase CIW72_18945 PF02874 ATP synthase alpha/beta family, beta-barrel domain CIW72_18945 PF00306 ATP synthase alpha/beta chain, C terminal domain CIW72_18945 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CIW72_18950 PF00213 ATP synthase delta (OSCP) subunit CIW72_18955 PF00430 ATP synthase B/B' CF(0) CIW72_18960 PF00137 ATP synthase subunit C CIW72_18965 PF00119 ATP synthase A chain CIW72_18985 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CIW72_18985 PF07992 Pyridine nucleotide-disulphide oxidoreductase CIW72_18995 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CIW72_18995 PF02817 e3 binding domain CIW72_18995 PF00364 Biotin-requiring enzyme CIW72_19030 PF03180 NLPA lipoprotein CIW72_19035 PF00528 Binding-protein-dependent transport system inner membrane component CIW72_19040 PF00005 ABC transporter CIW72_19040 PF09383 NIL domain CIW72_19045 PF00892 EamA-like transporter family CIW72_19050 PF04461 Protein of unknown function (DUF520) CIW72_19060 PF18415 Histidine kinase receptor ArcB trans-membrane domain CIW72_19060 PF00072 Response regulator receiver domain CIW72_19060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_19060 PF00989 PAS fold CIW72_19060 PF01627 Hpt domain CIW72_19060 PF00512 His Kinase A (phospho-acceptor) domain CIW72_19080 PF13419 Haloacid dehalogenase-like hydrolase CIW72_19085 PF01479 S4 domain CIW72_19085 PF00849 RNA pseudouridylate synthase CIW72_19090 PF08468 Methyltransferase small domain N-terminal CIW72_19090 PF05175 Methyltransferase small domain CIW72_19105 PF07995 Glucose / Sorbosone dehydrogenase CIW72_19115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_19115 PF00512 His Kinase A (phospho-acceptor) domain CIW72_19115 PF00989 PAS fold CIW72_19135 PF00842 Alanine racemase, C-terminal domain CIW72_19135 PF01168 Alanine racemase, N-terminal domain CIW72_19140 PF01266 FAD dependent oxidoreductase CIW72_19145 PF01037 Lrp/AsnC ligand binding domain CIW72_19155 PF01641 SelR domain CIW72_19165 PF01618 MotA/TolQ/ExbB proton channel family CIW72_19170 PF13677 Membrane MotB of proton-channel complex MotA/MotB CIW72_19170 PF00691 OmpA family CIW72_19200 PF01061 ABC-2 type transporter CIW72_19205 PF00005 ABC transporter CIW72_19210 PF00999 Sodium/hydrogen exchanger family CIW72_19220 PF02469 Fasciclin domain CIW72_19225 PF03167 Uracil DNA glycosylase superfamily CIW72_19235 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CIW72_19245 PF03466 LysR substrate binding domain CIW72_19245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW72_19250 PF03358 NADPH-dependent FMN reductase CIW72_19255 PF00248 Aldo/keto reductase family CIW72_19270 PF01431 Peptidase family M13 CIW72_19270 PF05649 Peptidase family M13 CIW72_19290 PF13520 Amino acid permease CIW72_19300 PF00072 Response regulator receiver domain CIW72_19300 PF04397 LytTr DNA-binding domain CIW72_19305 PF02743 Cache domain CIW72_19305 PF00672 HAMP domain CIW72_19305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_19305 PF06580 Histidine kinase CIW72_19330 PF05974 Domain of unknown function (DUF892) CIW72_19335 PF05067 Manganese containing catalase CIW72_19355 PF08448 PAS fold CIW72_19355 PF03705 CheR methyltransferase, all-alpha domain CIW72_19355 PF01739 CheR methyltransferase, SAM binding domain CIW72_19355 PF01339 CheB methylesterase CIW72_19370 PF02954 Bacterial regulatory protein, Fis family CIW72_19370 PF00072 Response regulator receiver domain CIW72_19370 PF00158 Sigma-54 interaction domain CIW72_19385 PF01654 Cytochrome bd terminal oxidase subunit I CIW72_19390 PF02322 Cytochrome bd terminal oxidase subunit II CIW72_19410 PF16363 GDP-mannose 4,6 dehydratase CIW72_19420 PF03275 UDP-galactopyranose mutase CIW72_19430 PF00664 ABC transporter transmembrane region CIW72_19430 PF00005 ABC transporter CIW72_19445 PF13823 Alcohol dehydrogenase GroES-associated CIW72_19445 PF08240 Alcohol dehydrogenase GroES-like domain CIW72_19445 PF00107 Zinc-binding dehydrogenase CIW72_19490 PF00593 TonB dependent receptor CIW72_19490 PF07715 TonB-dependent Receptor Plug Domain CIW72_19505 PF00005 ABC transporter CIW72_19530 PF03466 LysR substrate binding domain CIW72_19530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW72_19535 PF02525 Flavodoxin-like fold CIW72_19580 PF00557 Metallopeptidase family M24 CIW72_19605 PF03979 Sigma-70 factor, region 1.1 CIW72_19605 PF04546 Sigma-70, non-essential region CIW72_19605 PF00140 Sigma-70 factor, region 1.2 CIW72_19605 PF04545 Sigma-70, region 4 CIW72_19605 PF04539 Sigma-70 region 3 CIW72_19605 PF04542 Sigma-70 region 2 CIW72_19610 PF02580 D-Tyr-tRNA(Tyr) deacylase CIW72_19615 PF03279 Bacterial lipid A biosynthesis acyltransferase CIW72_19635 PF00925 GTP cyclohydrolase II CIW72_19655 PF00535 Glycosyl transferase family 2 CIW72_19670 PF01029 NusB family CIW72_19670 PF01189 16S rRNA methyltransferase RsmB/F CIW72_19675 PF00551 Formyl transferase CIW72_19675 PF02911 Formyl transferase, C-terminal domain CIW72_19680 PF01327 Polypeptide deformylase CIW72_19685 PF01476 LysM domain CIW72_19690 PF17782 DprA winged helix domain CIW72_19690 PF02481 DNA recombination-mediator protein A CIW72_19695 PF04361 Protein of unknown function (DUF494) CIW72_19700 PF00114 Pilin (bacterial filament) CIW72_19700 PF07963 Prokaryotic N-terminal methylation motif CIW72_19710 PF01131 DNA topoisomerase CIW72_19710 PF01751 Toprim domain CIW72_19710 PF13368 Topoisomerase C-terminal repeat CIW72_19715 PF01300 Telomere recombination CIW72_19745 PF01343 Peptidase family S49 CIW72_19750 PF01554 MatE CIW72_19770 PF18074 Primosomal protein N C-terminal domain CIW72_19770 PF00270 DEAD/DEAH box helicase CIW72_19770 PF17764 3′ DNA-binding domain (3′BD) CIW72_19770 PF00271 Helicase conserved C-terminal domain CIW72_19770 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CIW72_19775 PF13417 Glutathione S-transferase, N-terminal domain CIW72_19775 PF00043 Glutathione S-transferase, C-terminal domain CIW72_19790 PF07992 Pyridine nucleotide-disulphide oxidoreductase CIW72_19795 PF03458 UPF0126 domain CIW72_19800 PF04542 Sigma-70 region 2 CIW72_19800 PF04545 Sigma-70, region 4 CIW72_19805 PF03167 Uracil DNA glycosylase superfamily CIW72_19810 PF00072 Response regulator receiver domain CIW72_19815 PF18075 FtsX extracellular domain CIW72_19820 PF00005 ABC transporter CIW72_19825 PF12300 ATP-dependent RNA helicase RhlB CIW72_19825 PF00271 Helicase conserved C-terminal domain CIW72_19825 PF00270 DEAD/DEAH box helicase CIW72_19830 PF00085 Thioredoxin CIW72_19835 PF07497 Rho termination factor, RNA-binding domain CIW72_19835 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CIW72_19835 PF07498 Rho termination factor, N-terminal domain CIW72_19845 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) CIW72_19850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW72_19850 PF03466 LysR substrate binding domain CIW72_19860 PF03971 Monomeric isocitrate dehydrogenase CIW72_19870 PF04972 BON domain CIW72_19870 PF01476 LysM domain CIW72_19875 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CIW72_19875 PF14489 QueF-like protein CIW72_19880 PF07687 Peptidase dimerisation domain CIW72_19880 PF01546 Peptidase family M20/M25/M40 CIW72_19885 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CIW72_19890 PF00873 AcrB/AcrD/AcrF family CIW72_19895 PF00873 AcrB/AcrD/AcrF family CIW72_19900 PF07063 Domain of unknown function (DUF1338) CIW72_19950 PF01427 D-ala-D-ala dipeptidase CIW72_19955 PF01510 N-acetylmuramoyl-L-alanine amidase CIW72_19965 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CIW72_19965 PF13378 Enolase C-terminal domain-like CIW72_19975 PF13520 Amino acid permease CIW72_19990 PF05360 yiaA/B two helix domain CIW72_19995 PF07995 Glucose / Sorbosone dehydrogenase CIW72_20000 PF01915 Glycosyl hydrolase family 3 C-terminal domain CIW72_20000 PF00933 Glycosyl hydrolase family 3 N terminal domain CIW72_20000 PF14310 Fibronectin type III-like domain CIW72_20005 PF02152 Dihydroneopterin aldolase CIW72_20010 PF00814 Glycoprotease family CIW72_20015 PF01165 Ribosomal protein S21 CIW72_20020 PF09424 Yqey-like protein CIW72_20030 PF03631 Virulence factor BrkB CIW72_20035 PF10410 DnaB-helicase binding domain of primase CIW72_20035 PF08278 DNA primase DnaG DnaB-binding CIW72_20035 PF08275 DNA primase catalytic core, N-terminal domain CIW72_20035 PF01807 CHC2 zinc finger CIW72_20040 PF13593 SBF-like CPA transporter family (DUF4137) CIW72_20050 PF01040 UbiA prenyltransferase family CIW72_20075 PF00510 Cytochrome c oxidase subunit III CIW72_20080 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 CIW72_20090 PF00115 Cytochrome C and Quinol oxidase polypeptide I CIW72_20095 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CIW72_20095 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CIW72_20105 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CIW72_20105 PF00171 Aldehyde dehydrogenase family CIW72_20105 PF01619 Proline dehydrogenase CIW72_20105 PF14850 DNA-binding domain of Proline dehydrogenase CIW72_20140 PF00579 tRNA synthetases class I (W and Y) CIW72_20145 PF04225 Opacity-associated protein A LysM-like domain CIW72_20145 PF01551 Peptidase family M23 CIW72_20150 PF03702 Anhydro-N-acetylmuramic acid kinase CIW72_20160 PF07690 Major Facilitator Superfamily CIW72_20165 PF03372 Endonuclease/Exonuclease/phosphatase family CIW72_20170 PF00156 Phosphoribosyl transferase domain CIW72_20180 PF13614 AAA domain CIW72_20185 PF02195 ParB-like nuclease domain CIW72_20185 PF17762 HTH domain found in ParB protein CIW72_20200 PF01370 NAD dependent epimerase/dehydratase family CIW72_20205 PF00535 Glycosyl transferase family 2 CIW72_20220 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CIW72_20220 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CIW72_20220 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CIW72_20220 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CIW72_20225 PF00692 dUTPase CIW72_20230 PF02441 Flavoprotein CIW72_20230 PF04127 DNA / pantothenate metabolism flavoprotein CIW72_20235 PF04002 RadC-like JAB domain CIW72_20240 PF00750 tRNA synthetases class I (R) CIW72_20240 PF05746 DALR anticodon binding domain CIW72_20240 PF03485 Arginyl tRNA synthetase N terminal domain CIW72_20255 PF00106 short chain dehydrogenase CIW72_20260 PF01757 Acyltransferase family CIW72_20265 PF03033 Glycosyltransferase family 28 N-terminal domain CIW72_20275 PF17944 Arginine decarboxylase C-terminal helical extension CIW72_20275 PF17810 Arginine decarboxylase helical bundle domain CIW72_20275 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CIW72_20280 PF17284 Spermidine synthase tetramerisation domain CIW72_20310 PF00543 Nitrogen regulatory protein P-II CIW72_20315 PF04380 Membrane fusogenic activity CIW72_20320 PF01078 Magnesium chelatase, subunit ChlI CIW72_20320 PF13335 Magnesium chelatase, subunit ChlI C-terminal CIW72_20335 PF00563 EAL domain CIW72_20335 PF12792 CSS motif domain associated with EAL CIW72_20340 PF00487 Fatty acid desaturase CIW72_20345 PF00970 Oxidoreductase FAD-binding domain CIW72_20345 PF00111 2Fe-2S iron-sulfur cluster binding domain CIW72_20345 PF00175 Oxidoreductase NAD-binding domain CIW72_20350 PF00440 Bacterial regulatory proteins, tetR family CIW72_20375 PF01139 tRNA-splicing ligase RtcB CIW72_20410 PF01370 NAD dependent epimerase/dehydratase family CIW72_20410 PF08338 Domain of unknown function (DUF1731) CIW72_20415 PF00486 Transcriptional regulatory protein, C terminal CIW72_20415 PF00072 Response regulator receiver domain CIW72_20420 PF08521 Two-component sensor kinase N-terminal CIW72_20420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_20420 PF00512 His Kinase A (phospho-acceptor) domain CIW72_20450 PF00595 PDZ domain CIW72_20470 PF01594 AI-2E family transporter CIW72_20475 PF13419 Haloacid dehalogenase-like hydrolase CIW72_20480 PF02789 Cytosol aminopeptidase family, N-terminal domain CIW72_20480 PF00883 Cytosol aminopeptidase family, catalytic domain CIW72_20490 PF08281 Sigma-70, region 4 CIW72_20490 PF04542 Sigma-70 region 2 CIW72_20495 PF00199 Catalase CIW72_20510 PF00072 Response regulator receiver domain CIW72_20510 PF00196 Bacterial regulatory proteins, luxR family CIW72_20515 PF07730 Histidine kinase CIW72_20520 PF13533 Biotin-lipoyl like CIW72_20525 PF00005 ABC transporter CIW72_20545 PF00892 EamA-like transporter family CIW72_20570 PF00753 Metallo-beta-lactamase superfamily CIW72_20575 PF00579 tRNA synthetases class I (W and Y) CIW72_20580 PF05532 CsbD-like CIW72_20595 PF00491 Arginase family CIW72_20625 PF02223 Thymidylate kinase CIW72_20675 PF03309 Type III pantothenate kinase CIW72_20680 PF02237 Biotin protein ligase C terminal domain CIW72_20680 PF03099 Biotin/lipoate A/B protein ligase family CIW72_20680 PF08279 HTH domain CIW72_20720 PF00672 HAMP domain CIW72_20720 PF00512 His Kinase A (phospho-acceptor) domain CIW72_20720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_20725 PF00072 Response regulator receiver domain CIW72_20725 PF00486 Transcriptional regulatory protein, C terminal CIW72_20735 PF01207 Dihydrouridine synthase (Dus) CIW72_20755 PF06628 Catalase-related immune-responsive CIW72_20755 PF00199 Catalase CIW72_20765 PF13307 Helicase C-terminal domain CIW72_20765 PF06733 DEAD_2 CIW72_20780 PF01488 Shikimate / quinate 5-dehydrogenase CIW72_20780 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CIW72_20780 PF08501 Shikimate dehydrogenase substrate binding domain CIW72_20790 PF00175 Oxidoreductase NAD-binding domain CIW72_20790 PF00258 Flavodoxin CIW72_20790 PF00667 FAD binding domain CIW72_20800 PF03466 LysR substrate binding domain CIW72_20800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW72_20815 PF00490 Delta-aminolevulinic acid dehydratase CIW72_20840 PF00326 Prolyl oligopeptidase family CIW72_20840 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CIW72_20845 PF02798 Glutathione S-transferase, N-terminal domain CIW72_20845 PF00043 Glutathione S-transferase, C-terminal domain CIW72_20870 PF04820 Tryptophan halogenase CIW72_20885 PF00005 ABC transporter CIW72_20895 PF01381 Helix-turn-helix CIW72_20905 PF01229 Glycosyl hydrolases family 39 CIW72_20910 PF02583 Metal-sensitive transcriptional repressor CIW72_20915 PF16916 Dimerisation domain of Zinc Transporter CIW72_20915 PF01545 Cation efflux family CIW72_20925 PF07715 TonB-dependent Receptor Plug Domain CIW72_20925 PF00593 TonB dependent receptor CIW72_20935 PF01965 DJ-1/PfpI family CIW72_20935 PF12833 Helix-turn-helix domain CIW72_20940 PF00175 Oxidoreductase NAD-binding domain CIW72_20940 PF00111 2Fe-2S iron-sulfur cluster binding domain CIW72_20940 PF00970 Oxidoreductase FAD-binding domain CIW72_20945 PF00005 ABC transporter CIW72_20950 PF01061 ABC-2 type transporter CIW72_20960 PF08546 Ketopantoate reductase PanE/ApbA C terminal CIW72_20960 PF02558 Ketopantoate reductase PanE/ApbA CIW72_20990 PF00268 Ribonucleotide reductase, small chain CIW72_21000 PF00317 Ribonucleotide reductase, all-alpha domain CIW72_21000 PF03477 ATP cone domain CIW72_21000 PF02867 Ribonucleotide reductase, barrel domain CIW72_21025 PF01769 Divalent cation transporter CIW72_21025 PF00571 CBS domain CIW72_21025 PF03448 MgtE intracellular N domain CIW72_21035 PF00194 Eukaryotic-type carbonic anhydrase CIW72_21040 PF00999 Sodium/hydrogen exchanger family CIW72_21040 PF02254 TrkA-N domain CIW72_21045 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CIW72_21045 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CIW72_21050 PF00723 Glycosyl hydrolases family 15 CIW72_21065 PF05166 YcgL domain CIW72_21070 PF00109 Beta-ketoacyl synthase, N-terminal domain CIW72_21070 PF02801 Beta-ketoacyl synthase, C-terminal domain CIW72_21080 PF00535 Glycosyl transferase family 2 CIW72_21140 PF07977 FabA-like domain CIW72_21145 PF01553 Acyltransferase CIW72_21155 PF00550 Phosphopantetheine attachment site CIW72_21160 PF04820 Tryptophan halogenase CIW72_21185 PF00326 Prolyl oligopeptidase family CIW72_21185 PF07676 WD40-like Beta Propeller Repeat CIW72_21205 PF01218 Coproporphyrinogen III oxidase CIW72_21215 PF01367 5'-3' exonuclease, C-terminal SAM fold CIW72_21215 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CIW72_21215 PF00476 DNA polymerase family A CIW72_21215 PF01612 3'-5' exonuclease CIW72_21285 PF04717 Type VI secretion system, phage-baseplate injector CIW72_21310 PF08281 Sigma-70, region 4 CIW72_21310 PF04542 Sigma-70 region 2 CIW72_21330 PF00328 Histidine phosphatase superfamily (branch 2) CIW72_21360 PF17871 AAA lid domain CIW72_21360 PF07724 AAA domain (Cdc48 subfamily) CIW72_21360 PF00004 ATPase family associated with various cellular activities (AAA) CIW72_21360 PF10431 C-terminal, D2-small domain, of ClpB protein CIW72_21410 PF14602 Hexapeptide repeat of succinyl-transferase CIW72_21410 PF12464 Maltose acetyltransferase CIW72_21420 PF13361 UvrD-like helicase C-terminal domain CIW72_21420 PF00580 UvrD/REP helicase N-terminal domain CIW72_21435 PF13396 Phospholipase_D-nuclease N-terminal CIW72_21435 PF13091 PLD-like domain CIW72_21445 PF03737 Aldolase/RraA CIW72_21450 PF04303 PrpF protein CIW72_21460 PF04909 Amidohydrolase CIW72_21465 PF00471 Ribosomal protein L33 CIW72_21470 PF00830 Ribosomal L28 family CIW72_21475 PF00873 AcrB/AcrD/AcrF family CIW72_21485 PF13533 Biotin-lipoyl like CIW72_21505 PF02527 rRNA small subunit methyltransferase G CIW72_21510 PF16655 PhoD-like phosphatase, N-terminal domain CIW72_21510 PF09423 PhoD-like phosphatase CIW72_21515 PF09423 PhoD-like phosphatase CIW72_21515 PF16655 PhoD-like phosphatase, N-terminal domain CIW72_21520 PF01648 4'-phosphopantetheinyl transferase superfamily CIW72_21525 PF04226 Transglycosylase associated protein CIW72_21535 PF03372 Endonuclease/Exonuclease/phosphatase family CIW72_21540 PF00480 ROK family CIW72_21550 PF00639 PPIC-type PPIASE domain CIW72_21550 PF09312 SurA N-terminal domain CIW72_21560 PF00474 Sodium:solute symporter family CIW72_21565 PF04341 Protein of unknown function, DUF485 CIW72_21575 PF13193 AMP-binding enzyme C-terminal domain CIW72_21575 PF16177 Acetyl-coenzyme A synthetase N-terminus CIW72_21575 PF00501 AMP-binding enzyme CIW72_21580 PF00072 Response regulator receiver domain CIW72_21580 PF00196 Bacterial regulatory proteins, luxR family CIW72_21605 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CIW72_21605 PF04616 Glycosyl hydrolases family 43 CIW72_21615 PF00248 Aldo/keto reductase family CIW72_21630 PF01557 Fumarylacetoacetate (FAA) hydrolase family CIW72_21640 PF13378 Enolase C-terminal domain-like CIW72_21640 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CIW72_21645 PF05336 L-rhamnose mutarotase CIW72_21650 PF07690 Major Facilitator Superfamily CIW72_21655 PF01614 Bacterial transcriptional regulator CIW72_21655 PF09339 IclR helix-turn-helix domain CIW72_21665 PF02659 Putative manganese efflux pump CIW72_21670 PF00512 His Kinase A (phospho-acceptor) domain CIW72_21670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_21685 PF06165 Glycosyltransferase family 36 CIW72_21685 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain CIW72_21705 PF13360 PQQ-like domain CIW72_21705 PF13570 PQQ-like domain CIW72_21705 PF01011 PQQ enzyme repeat CIW72_21735 PF04357 TamB, inner membrane protein subunit of TAM complex CIW72_21740 PF17243 POTRA domain TamA domain 1 CIW72_21740 PF01103 Surface antigen CIW72_21745 PF00593 TonB dependent receptor CIW72_21745 PF07715 TonB-dependent Receptor Plug Domain CIW72_21750 PF13181 Tetratricopeptide repeat CIW72_21755 PF02092 Glycyl-tRNA synthetase beta subunit CIW72_21755 PF05746 DALR anticodon binding domain CIW72_21760 PF02091 Glycyl-tRNA synthetase alpha subunit CIW72_21765 PF00437 Type II/IV secretion system protein CIW72_21765 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CIW72_21780 PF00958 GMP synthase C terminal domain CIW72_21780 PF00117 Glutamine amidotransferase class-I CIW72_21790 PF00902 Sec-independent protein translocase protein (TatC) CIW72_21795 PF02416 mttA/Hcf106 family CIW72_21800 PF02416 mttA/Hcf106 family CIW72_21810 PF00762 Ferrochelatase CIW72_21815 PF12697 Alpha/beta hydrolase family CIW72_21835 PF04381 Putative exonuclease, RdgC CIW72_21840 PF01171 PP-loop family CIW72_21855 PF00356 Bacterial regulatory proteins, lacI family CIW72_21860 PF07488 Glycosyl hydrolase family 67 middle domain CIW72_21860 PF07477 Glycosyl hydrolase family 67 C-terminus CIW72_21860 PF03648 Glycosyl hydrolase family 67 N-terminus CIW72_21870 PF13378 Enolase C-terminal domain-like CIW72_21870 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CIW72_21875 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CIW72_21875 PF04616 Glycosyl hydrolases family 43 CIW72_21880 PF14310 Fibronectin type III-like domain CIW72_21880 PF00933 Glycosyl hydrolase family 3 N terminal domain CIW72_21880 PF07691 PA14 domain CIW72_21880 PF01915 Glycosyl hydrolase family 3 C-terminal domain CIW72_21885 PF01232 Mannitol dehydrogenase Rossmann domain CIW72_21885 PF08125 Mannitol dehydrogenase C-terminal domain CIW72_21920 PF00171 Aldehyde dehydrogenase family CIW72_21935 PF00202 Aminotransferase class-III CIW72_21945 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CIW72_21945 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CIW72_21965 PF08450 SMP-30/Gluconolactonase/LRE-like region CIW72_21970 PF00331 Glycosyl hydrolase family 10 CIW72_21975 PF00703 Glycosyl hydrolases family 2 CIW72_21975 PF16355 Domain of unknown function (DUF4982) CIW72_21975 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 CIW72_21975 PF02837 Glycosyl hydrolases family 2, sugar binding domain CIW72_21975 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CIW72_21980 PF02614 Glucuronate isomerase CIW72_21995 PF00331 Glycosyl hydrolase family 10 CIW72_21995 PF00553 Cellulose binding domain CIW72_21995 PF03422 Carbohydrate binding module (family 6) CIW72_22015 PF04616 Glycosyl hydrolases family 43 CIW72_22040 PF04349 Periplasmic glucan biosynthesis protein, MdoG CIW72_22045 PF00360 Phytochrome region CIW72_22045 PF08446 PAS fold CIW72_22045 PF01590 GAF domain CIW72_22045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIW72_22045 PF00512 His Kinase A (phospho-acceptor) domain CIW72_22050 PF00265 Thymidine kinase CIW72_22055 PF13361 UvrD-like helicase C-terminal domain CIW72_22055 PF00580 UvrD/REP helicase N-terminal domain CIW72_22060 PF13302 Acetyltransferase (GNAT) domain CIW72_22070 PF04337 Protein of unknown function, DUF480 CIW72_22080 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) CIW72_22085 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CIW72_22090 PF04820 Tryptophan halogenase CIW72_22105 PF00356 Bacterial regulatory proteins, lacI family CIW72_22120 PF01553 Acyltransferase CIW72_22125 PF00698 Acyl transferase domain CIW72_22125 PF08240 Alcohol dehydrogenase GroES-like domain CIW72_22125 PF16197 Ketoacyl-synthetase C-terminal extension CIW72_22125 PF00109 Beta-ketoacyl synthase, N-terminal domain CIW72_22125 PF02801 Beta-ketoacyl synthase, C-terminal domain CIW72_22125 PF00107 Zinc-binding dehydrogenase CIW72_22125 PF08659 KR domain CIW72_22125 PF00550 Phosphopantetheine attachment site CIW72_22125 PF14765 Polyketide synthase dehydratase CIW72_22135 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CIW72_22135 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CIW72_22135 PF06827 Zinc finger found in FPG and IleRS CIW72_22165 PF03594 Benzoate membrane transport protein CIW72_22170 PF13426 PAS domain CIW72_22170 PF08446 PAS fold CIW72_22170 PF01590 GAF domain CIW72_22170 PF00360 Phytochrome region CIW72_22175 PF01126 Heme oxygenase CIW72_22180 PF07690 Major Facilitator Superfamily CIW72_22185 PF01263 Aldose 1-epimerase CIW72_22195 PF02810 SEC-C motif CIW72_22200 PF01925 Sulfite exporter TauE/SafE CIW72_22220 PF01227 GTP cyclohydrolase I CIW72_22230 PF07869 Protein of unknown function (DUF1656) CIW72_22235 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CIW72_22235 PF00529 HlyD membrane-fusion protein of T1SS CIW72_22240 PF02321 Outer membrane efflux protein CIW72_22245 PF04632 Fusaric acid resistance protein family CIW72_22250 PF00083 Sugar (and other) transporter CIW72_22260 PF13396 Phospholipase_D-nuclease N-terminal CIW72_22260 PF13091 PLD-like domain CIW72_22285 PF01850 PIN domain CIW72_22320 PF13538 UvrD-like helicase C-terminal domain CIW72_22325 PF00580 UvrD/REP helicase N-terminal domain CIW72_22325 PF12705 PD-(D/E)XK nuclease superfamily CIW72_22325 PF13361 UvrD-like helicase C-terminal domain CIW72_22330 PF17946 RecC C-terminal domain CIW72_22345 PF00005 ABC transporter CIW72_22350 PF02405 Permease MlaE CIW72_22355 PF02470 MlaD protein CIW72_22360 PF05494 MlaC protein CIW72_22370 PF04333 MlaA lipoprotein CIW72_22380 PF00255 Glutathione peroxidase CIW72_22390 PF02646 RmuC family CIW72_22395 PF08240 Alcohol dehydrogenase GroES-like domain CIW72_22395 PF00107 Zinc-binding dehydrogenase CIW72_22400 PF03466 LysR substrate binding domain CIW72_22400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIW72_22415 PF00043 Glutathione S-transferase, C-terminal domain CIW72_22415 PF13417 Glutathione S-transferase, N-terminal domain CIW72_22425 PF13520 Amino acid permease CIW72_22440 PF10947 Protein of unknown function (DUF2628) CIW72_22445 PF00990 Diguanylate cyclase, GGDEF domain CIW72_22465 PF10672 S-adenosylmethionine-dependent methyltransferase CIW72_22465 PF17785 PUA-like domain CIW72_22475 PF03741 Integral membrane protein TerC family CIW72_22485 PF01694 Rhomboid family CIW72_22490 PF03009 Glycerophosphoryl diester phosphodiesterase family CIW72_22500 PF01569 PAP2 superfamily CIW72_22505 PF10396 GTP-binding protein TrmE N-terminus CIW72_22505 PF12631 MnmE helical domain CIW72_22505 PF01926 50S ribosome-binding GTPase CIW72_22510 PF01522 Polysaccharide deacetylase CIW72_22515 PF02096 60Kd inner membrane protein CIW72_22515 PF14849 YidC periplasmic domain CIW72_22520 PF00825 Ribonuclease P CIW72_22525 PF00468 Ribosomal protein L34 CIW72_22530 PF01527 Transposase CIW72_22535 PF03377 TAL effector repeat CIW72_22540 PF02796 Helix-turn-helix domain of resolvase CIW72_22540 PF00239 Resolvase, N terminal domain CIW72_22590 PF03377 TAL effector repeat CIW72_22610 PF03377 TAL effector repeat CIW72_22630 PF02796 Helix-turn-helix domain of resolvase CIW72_22630 PF00239 Resolvase, N terminal domain CIW72_22650 PF13614 AAA domain CIW72_22650 PF00376 MerR family regulatory protein CIW72_22660 PF03377 TAL effector repeat CIW72_22695 PF07015 VirC1 protein CIW72_22705 PF00239 Resolvase, N terminal domain CIW72_22705 PF02796 Helix-turn-helix domain of resolvase CIW72_22710 PF09386 Antitoxin ParD CIW72_22715 PF05016 ParE toxin of type II toxin-antitoxin system, parDE CIW72_22720 PF03377 TAL effector repeat CIW72_22735 PF00239 Resolvase, N terminal domain CIW72_22735 PF02796 Helix-turn-helix domain of resolvase CIW72_22755 PF02796 Helix-turn-helix domain of resolvase CIW72_22755 PF00239 Resolvase, N terminal domain CIW72_22770 PF13700 Domain of unknown function (DUF4158) CIW72_22770 PF01526 Tn3 transposase DDE domain CIW72_22775 PF02810 SEC-C motif CIW72_22775 PF03695 Uncharacterised protein family (UPF0149) CIW72_22805 PF02796 Helix-turn-helix domain of resolvase CIW72_22805 PF00239 Resolvase, N terminal domain CIW72_22810 PF03377 TAL effector repeat CIW72_22845 PF07015 VirC1 protein CIW72_22875 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CIW72_22905 PF07057 DNA helicase TraI CIW72_22905 PF18340 DNA relaxase TraI 2B/2B-like domain CIW72_22905 PF08751 TrwC relaxase CIW72_22905 PF18272 single-stranded DNA binding TraI N-terminal subdomain CIW72_22925 PF03377 TAL effector repeat CIW72_22935 PF13406 Transglycosylase SLT domain CIW72_22960 PF03421 YopJ Serine/Threonine acetyltransferase CIW72_22975 PF03695 Uncharacterised protein family (UPF0149) CIW72_22975 PF02810 SEC-C motif CIW72_22980 PF01526 Tn3 transposase DDE domain CIW72_22980 PF13700 Domain of unknown function (DUF4158) CIW72_22995 PF00239 Resolvase, N terminal domain CIW72_22995 PF02796 Helix-turn-helix domain of resolvase CIW72_23030 PF00239 Resolvase, N terminal domain CIW72_23030 PF02796 Helix-turn-helix domain of resolvase CIW72_23045 PF13700 Domain of unknown function (DUF4158) CIW72_23045 PF01526 Tn3 transposase DDE domain CIW72_23050 PF02810 SEC-C motif CIW72_23050 PF03695 Uncharacterised protein family (UPF0149) CIW72_23080 PF03389 MobA/MobL family