locus-tag class description BGK55_00005 PF11638 DnaA N-terminal domain BGK55_00005 PF00308 Bacterial dnaA protein BGK55_00005 PF08299 Bacterial dnaA protein helix-turn-helix BGK55_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain BGK55_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain BGK55_00010 PF02767 DNA polymerase III beta subunit, central domain BGK55_00015 PF02463 RecF/RecN/SMC N terminal domain BGK55_00020 PF18053 DNA gyrase B subunit insert domain BGK55_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_00020 PF01751 Toprim domain BGK55_00020 PF00204 DNA gyrase B BGK55_00020 PF00986 DNA gyrase B subunit, carboxyl terminus BGK55_00030 PF01435 Peptidase family M48 BGK55_00040 PF03544 Gram-negative bacterial TonB protein C-terminal BGK55_00045 PF01618 MotA/TolQ/ExbB proton channel family BGK55_00050 PF02472 Biopolymer transport protein ExbD/TolR BGK55_00055 PF02472 Biopolymer transport protein ExbD/TolR BGK55_00060 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BGK55_00070 PF13396 Phospholipase_D-nuclease N-terminal BGK55_00070 PF13091 PLD-like domain BGK55_00085 PF04055 Radical SAM superfamily BGK55_00110 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BGK55_00110 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BGK55_00115 PF03572 Peptidase family S41 BGK55_00115 PF13180 PDZ domain BGK55_00120 PF01551 Peptidase family M23 BGK55_00130 PF04389 Peptidase family M28 BGK55_00140 PF00150 Cellulase (glycosyl hydrolase family 5) BGK55_00150 PF00150 Cellulase (glycosyl hydrolase family 5) BGK55_00155 PF00150 Cellulase (glycosyl hydrolase family 5) BGK55_00160 PF00107 Zinc-binding dehydrogenase BGK55_00160 PF08240 Alcohol dehydrogenase GroES-like domain BGK55_00165 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BGK55_00165 PF07992 Pyridine nucleotide-disulphide oxidoreductase BGK55_00170 PF04898 Glutamate synthase central domain BGK55_00170 PF00310 Glutamine amidotransferases class-II BGK55_00170 PF01645 Conserved region in glutamate synthase BGK55_00170 PF01493 GXGXG motif BGK55_00215 PF02397 Bacterial sugar transferase BGK55_00220 PF02350 UDP-N-acetylglucosamine 2-epimerase BGK55_00230 PF03808 Glycosyl transferase WecB/TagA/CpsF family BGK55_00235 PF00534 Glycosyl transferases group 1 BGK55_00235 PF13439 Glycosyltransferase Family 4 BGK55_00255 PF13537 Glutamine amidotransferase domain BGK55_00255 PF00733 Asparagine synthase BGK55_00270 PF16363 GDP-mannose 4,6 dehydratase BGK55_00285 PF00664 ABC transporter transmembrane region BGK55_00285 PF00005 ABC transporter BGK55_00300 PF13537 Glutamine amidotransferase domain BGK55_00300 PF00733 Asparagine synthase BGK55_00315 PF02603 HPr Serine kinase N terminus BGK55_00315 PF07475 HPr Serine kinase C-terminal domain BGK55_00320 PF00685 Sulfotransferase domain BGK55_00405 PF09369 Domain of unknown function (DUF1998) BGK55_00405 PF00271 Helicase conserved C-terminal domain BGK55_00405 PF00270 DEAD/DEAH box helicase BGK55_00410 PF03006 Haemolysin-III related BGK55_00430 PF00106 short chain dehydrogenase BGK55_00440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGK55_00440 PF03466 LysR substrate binding domain BGK55_00450 PF02525 Flavodoxin-like fold BGK55_00475 PF05532 CsbD-like BGK55_00495 PF02868 Thermolysin metallopeptidase, alpha-helical domain BGK55_00495 PF01447 Thermolysin metallopeptidase, catalytic domain BGK55_00495 PF16485 Protealysin propeptide BGK55_00505 PF13344 Haloacid dehalogenase-like hydrolase BGK55_00505 PF00293 NUDIX domain BGK55_00525 PF00085 Thioredoxin BGK55_00575 PF07726 ATPase family associated with various cellular activities (AAA) BGK55_00575 PF17863 AAA lid domain BGK55_00605 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BGK55_00610 PF00155 Aminotransferase class I and II BGK55_00615 PF00593 TonB dependent receptor BGK55_00615 PF07715 TonB-dependent Receptor Plug Domain BGK55_00675 PF02735 Ku70/Ku80 beta-barrel domain BGK55_00680 PF01070 FMN-dependent dehydrogenase BGK55_00685 PF00144 Beta-lactamase BGK55_00690 PF07730 Histidine kinase BGK55_00695 PF00072 Response regulator receiver domain BGK55_00695 PF00196 Bacterial regulatory proteins, luxR family BGK55_00715 PF18500 CadC C-terminal domain 1 BGK55_00715 PF00486 Transcriptional regulatory protein, C terminal BGK55_00720 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase BGK55_00720 PF12241 Trans-2-enoyl-CoA reductase catalytic region BGK55_00720 PF07055 Enoyl reductase FAD binding domain BGK55_00730 PF00294 pfkB family carbohydrate kinase BGK55_00770 PF00128 Alpha amylase, catalytic domain BGK55_00770 PF11896 Domain of unknown function (DUF3416) BGK55_00775 PF16657 Maltogenic Amylase, C-terminal domain BGK55_00775 PF00128 Alpha amylase, catalytic domain BGK55_00780 PF02806 Alpha amylase, C-terminal all-beta domain BGK55_00780 PF00128 Alpha amylase, catalytic domain BGK55_00780 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BGK55_00790 PF00248 Aldo/keto reductase family BGK55_00795 PF00135 Carboxylesterase family BGK55_00800 PF07859 alpha/beta hydrolase fold BGK55_00800 PF13472 GDSL-like Lipase/Acylhydrolase family BGK55_00810 PF03480 Bacterial extracellular solute-binding protein, family 7 BGK55_00820 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BGK55_00825 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BGK55_00825 PF04616 Glycosyl hydrolases family 43 BGK55_00830 PF00356 Bacterial regulatory proteins, lacI family BGK55_00835 PF04962 KduI/IolB family BGK55_00850 PF00657 GDSL-like Lipase/Acylhydrolase BGK55_00865 PF00351 Biopterin-dependent aromatic amino acid hydroxylase BGK55_00870 PF01037 Lrp/AsnC ligand binding domain BGK55_00875 PF07660 Secretin and TonB N terminus short domain BGK55_00875 PF00593 TonB dependent receptor BGK55_00875 PF07715 TonB-dependent Receptor Plug Domain BGK55_00880 PF01734 Patatin-like phospholipase BGK55_00890 PF00005 ABC transporter BGK55_00905 PF00005 ABC transporter BGK55_00910 PF00528 Binding-protein-dependent transport system inner membrane component BGK55_00920 PF03781 Sulfatase-modifying factor enzyme 1 BGK55_00920 PF12867 DinB superfamily BGK55_00940 PF01381 Helix-turn-helix BGK55_00965 PF01883 Iron-sulfur cluster assembly protein BGK55_00965 PF10609 NUBPL iron-transfer P-loop NTPase BGK55_00980 PF13091 PLD-like domain BGK55_00985 PF03061 Thioesterase superfamily BGK55_01010 PF01161 Phosphatidylethanolamine-binding protein BGK55_01020 PF02673 Bacitracin resistance protein BacA BGK55_01025 PF03951 Glutamine synthetase, beta-Grasp domain BGK55_01025 PF00120 Glutamine synthetase, catalytic domain BGK55_01030 PF00543 Nitrogen regulatory protein P-II BGK55_01035 PF00909 Ammonium Transporter Family BGK55_01040 PF00512 His Kinase A (phospho-acceptor) domain BGK55_01040 PF00989 PAS fold BGK55_01040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_01045 PF00158 Sigma-54 interaction domain BGK55_01045 PF00072 Response regulator receiver domain BGK55_01045 PF02954 Bacterial regulatory protein, Fis family BGK55_01050 PF00080 Copper/zinc superoxide dismutase (SODC) BGK55_01055 PF00080 Copper/zinc superoxide dismutase (SODC) BGK55_01070 PF02803 Thiolase, C-terminal domain BGK55_01070 PF00108 Thiolase, N-terminal domain BGK55_01105 PF00581 Rhodanese-like domain BGK55_01110 PF02556 Preprotein translocase subunit SecB BGK55_01115 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BGK55_01115 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BGK55_01130 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BGK55_01130 PF00205 Thiamine pyrophosphate enzyme, central domain BGK55_01130 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BGK55_01135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_01140 PF02954 Bacterial regulatory protein, Fis family BGK55_01140 PF00072 Response regulator receiver domain BGK55_01140 PF00158 Sigma-54 interaction domain BGK55_01155 PF07690 Major Facilitator Superfamily BGK55_01160 PF00588 SpoU rRNA Methylase family BGK55_01175 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BGK55_01175 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BGK55_01180 PF02661 Fic/DOC family BGK55_01180 PF13784 Fic/DOC family N-terminal BGK55_01185 PF00561 alpha/beta hydrolase fold BGK55_01190 PF03692 Putative zinc- or iron-chelating domain BGK55_01195 PF00501 AMP-binding enzyme BGK55_01205 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family BGK55_01220 PF01820 D-ala D-ala ligase N-terminus BGK55_01220 PF07478 D-ala D-ala ligase C-terminus BGK55_01230 PF03109 ABC1 family BGK55_01240 PF00849 RNA pseudouridylate synthase BGK55_01250 PF00472 RF-1 domain BGK55_01260 PF01112 Asparaginase BGK55_01265 PF01432 Peptidase family M3 BGK55_01295 PF00999 Sodium/hydrogen exchanger family BGK55_01305 PF01274 Malate synthase BGK55_01310 PF00463 Isocitrate lyase family BGK55_01315 PF00990 Diguanylate cyclase, GGDEF domain BGK55_01335 PF00326 Prolyl oligopeptidase family BGK55_01340 PF00364 Biotin-requiring enzyme BGK55_01340 PF00289 Biotin carboxylase, N-terminal domain BGK55_01340 PF02785 Biotin carboxylase C-terminal domain BGK55_01340 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BGK55_01345 PF01039 Carboxyl transferase domain BGK55_01350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BGK55_01350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BGK55_01350 PF02770 Acyl-CoA dehydrogenase, middle domain BGK55_01435 PF03969 AFG1-like ATPase BGK55_01440 PF01047 MarR family BGK55_01445 PF02566 OsmC-like protein BGK55_01475 PF16884 N-terminal domain of oxidoreductase BGK55_01475 PF00107 Zinc-binding dehydrogenase BGK55_01490 PF00849 RNA pseudouridylate synthase BGK55_01495 PF00593 TonB dependent receptor BGK55_01505 PF00271 Helicase conserved C-terminal domain BGK55_01505 PF00270 DEAD/DEAH box helicase BGK55_01505 PF04408 Helicase associated domain (HA2) BGK55_01505 PF08482 ATP-dependent helicase C-terminal BGK55_01510 PF07308 Protein of unknown function (DUF1456) BGK55_01515 PF00576 HIUase/Transthyretin family BGK55_01520 PF13454 FAD-NAD(P)-binding BGK55_01525 PF01014 Uricase BGK55_01525 PF09349 OHCU decarboxylase BGK55_01540 PF00266 Aminotransferase class-V BGK55_01545 PF01546 Peptidase family M20/M25/M40 BGK55_01545 PF07687 Peptidase dimerisation domain BGK55_01550 PF03466 LysR substrate binding domain BGK55_01550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGK55_01555 PF07690 Major Facilitator Superfamily BGK55_01570 PF01425 Amidase BGK55_01575 PF01156 Inosine-uridine preferring nucleoside hydrolase BGK55_01585 PF00860 Permease family BGK55_01590 PF00111 2Fe-2S iron-sulfur cluster binding domain BGK55_01595 PF00355 Rieske [2Fe-2S] domain BGK55_01600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGK55_01600 PF03466 LysR substrate binding domain BGK55_01605 PF01026 TatD related DNase BGK55_01620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGK55_01620 PF03466 LysR substrate binding domain BGK55_01625 PF07690 Major Facilitator Superfamily BGK55_01640 PF02146 Sir2 family BGK55_01645 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BGK55_01650 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BGK55_01650 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BGK55_01660 PF00551 Formyl transferase BGK55_01665 PF00072 Response regulator receiver domain BGK55_01665 PF00486 Transcriptional regulatory protein, C terminal BGK55_01670 PF00512 His Kinase A (phospho-acceptor) domain BGK55_01670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_01670 PF00672 HAMP domain BGK55_01675 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BGK55_01675 PF00529 HlyD membrane-fusion protein of T1SS BGK55_01685 PF02321 Outer membrane efflux protein BGK55_01700 PF02677 Epoxyqueuosine reductase QueH BGK55_01705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGK55_01705 PF03466 LysR substrate binding domain BGK55_01710 PF03358 NADPH-dependent FMN reductase BGK55_01720 PF08267 Cobalamin-independent synthase, N-terminal domain BGK55_01720 PF01717 Cobalamin-independent synthase, Catalytic domain BGK55_01725 PF03812 2-keto-3-deoxygluconate permease BGK55_01740 PF05368 NmrA-like family BGK55_01745 PF01638 HxlR-like helix-turn-helix BGK55_01790 PF00589 Phage integrase family BGK55_01790 PF13495 Phage integrase, N-terminal SAM-like domain BGK55_01795 PF00920 Dehydratase family BGK55_01815 PF00132 Bacterial transferase hexapeptide (six repeats) BGK55_01825 PF07690 Major Facilitator Superfamily BGK55_01830 PF01966 HD domain BGK55_01830 PF11871 Domain of unknown function (DUF3391) BGK55_01850 PF00171 Aldehyde dehydrogenase family BGK55_01860 PF01494 FAD binding domain BGK55_01870 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BGK55_01870 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BGK55_01875 PF00230 Major intrinsic protein BGK55_01880 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BGK55_01880 PF01266 FAD dependent oxidoreductase BGK55_01885 PF00455 DeoR C terminal sensor domain BGK55_01885 PF08220 DeoR-like helix-turn-helix domain BGK55_01895 PF00355 Rieske [2Fe-2S] domain BGK55_01900 PF01144 Coenzyme A transferase BGK55_01905 PF01144 Coenzyme A transferase BGK55_01910 PF02803 Thiolase, C-terminal domain BGK55_01910 PF00108 Thiolase, N-terminal domain BGK55_01920 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal BGK55_01920 PF00775 Dioxygenase BGK55_01930 PF00206 Lyase BGK55_01930 PF10397 Adenylosuccinate lyase C-terminus BGK55_01935 PF12146 Serine aminopeptidase, S33 BGK55_01940 PF02627 Carboxymuconolactone decarboxylase family BGK55_01950 PF09339 IclR helix-turn-helix domain BGK55_01950 PF01614 Bacterial transcriptional regulator BGK55_01965 PF10677 Protein of unknown function (DUF2490) BGK55_01970 PF13932 GidA associated domain BGK55_01970 PF01134 Glucose inhibited division protein A BGK55_01980 PF00291 Pyridoxal-phosphate dependent enzyme BGK55_02000 PF13649 Methyltransferase domain BGK55_02005 PF00106 short chain dehydrogenase BGK55_02010 PF12697 Alpha/beta hydrolase family BGK55_02020 PF00155 Aminotransferase class I and II BGK55_02025 PF04055 Radical SAM superfamily BGK55_02025 PF06968 Biotin and Thiamin Synthesis associated domain BGK55_02035 PF01040 UbiA prenyltransferase family BGK55_02045 PF05819 NolX protein BGK55_02080 PF01313 Bacterial export proteins, family 3 BGK55_02085 PF00813 FliP family BGK55_02100 PF00771 FHIPEP family BGK55_02105 PF01312 FlhB HrpN YscU SpaS Family BGK55_02120 PF01514 Secretory protein of YscJ/FliF family BGK55_02135 PF18269 T3SS EscN ATPase C-terminal domain BGK55_02135 PF02874 ATP synthase alpha/beta family, beta-barrel domain BGK55_02135 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BGK55_02145 PF01311 Bacterial export proteins, family 1 BGK55_02160 PF01464 Transglycosylase SLT domain BGK55_02180 PF12795 Mechanosensitive ion channel porin domain BGK55_02180 PF12794 Mechanosensitive ion channel inner membrane domain 1 BGK55_02180 PF00924 Mechanosensitive ion channel BGK55_02185 PF00884 Sulfatase BGK55_02190 PF03109 ABC1 family BGK55_02195 PF05661 Protein of unknown function (DUF808) BGK55_02200 PF00990 Diguanylate cyclase, GGDEF domain BGK55_02200 PF00072 Response regulator receiver domain BGK55_02205 PF08323 Starch synthase catalytic domain BGK55_02205 PF00534 Glycosyl transferases group 1 BGK55_02210 PF00128 Alpha amylase, catalytic domain BGK55_02210 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BGK55_02210 PF02806 Alpha amylase, C-terminal all-beta domain BGK55_02215 PF00128 Alpha amylase, catalytic domain BGK55_02215 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BGK55_02215 PF11941 Domain of unknown function (DUF3459) BGK55_02220 PF02446 4-alpha-glucanotransferase BGK55_02225 PF00128 Alpha amylase, catalytic domain BGK55_02235 PF00128 Alpha amylase, catalytic domain BGK55_02235 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BGK55_02240 PF13460 NAD(P)H-binding BGK55_02260 PF06903 VirK protein BGK55_02265 PF02321 Outer membrane efflux protein BGK55_02295 PF00271 Helicase conserved C-terminal domain BGK55_02295 PF00270 DEAD/DEAH box helicase BGK55_02300 PF02817 e3 binding domain BGK55_02300 PF00364 Biotin-requiring enzyme BGK55_02300 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BGK55_02310 PF02780 Transketolase, C-terminal domain BGK55_02310 PF02779 Transketolase, pyrimidine binding domain BGK55_02315 PF00676 Dehydrogenase E1 component BGK55_02325 PF03301 Tryptophan 2,3-dioxygenase BGK55_02330 PF00854 POT family BGK55_02340 PF01047 MarR family BGK55_02345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BGK55_02350 PF04209 homogentisate 1,2-dioxygenase BGK55_02365 PF03334 Na+/H+ antiporter subunit BGK55_02370 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) BGK55_02380 PF00361 Proton-conducting membrane transporter BGK55_02385 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BGK55_02390 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter BGK55_02390 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BGK55_02390 PF00361 Proton-conducting membrane transporter BGK55_02390 PF13244 Domain of unknown function (DUF4040) BGK55_02405 PF01483 Proprotein convertase P-domain BGK55_02405 PF01447 Thermolysin metallopeptidase, catalytic domain BGK55_02405 PF02868 Thermolysin metallopeptidase, alpha-helical domain BGK55_02405 PF07504 Fungalysin/Thermolysin Propeptide Motif BGK55_02410 PF00182 Chitinase class I BGK55_02430 PF01259 SAICAR synthetase BGK55_02435 PF00226 DnaJ domain BGK55_02435 PF05099 Tellurite resistance protein TerB BGK55_02445 PF00834 Ribulose-phosphate 3 epimerase family BGK55_02450 PF00583 Acetyltransferase (GNAT) family BGK55_02455 PF13356 Arm DNA-binding domain BGK55_02455 PF00589 Phage integrase family BGK55_02545 PF00781 Diacylglycerol kinase catalytic domain BGK55_02550 PF04715 Anthranilate synthase component I, N terminal region BGK55_02550 PF00425 chorismate binding enzyme BGK55_02560 PF00117 Glutamine amidotransferase class-I BGK55_02570 PF00591 Glycosyl transferase family, a/b domain BGK55_02570 PF02885 Glycosyl transferase family, helical bundle domain BGK55_02575 PF00218 Indole-3-glycerol phosphate synthase BGK55_02590 PF00325 Bacterial regulatory proteins, crp family BGK55_02590 PF00027 Cyclic nucleotide-binding domain BGK55_02595 PF02675 S-adenosylmethionine decarboxylase BGK55_02600 PF00893 Small Multidrug Resistance protein BGK55_02605 PF03232 Ubiquinone biosynthesis protein COQ7 BGK55_02610 PF00572 Ribosomal protein L13 BGK55_02615 PF00380 Ribosomal protein S9/S16 BGK55_02630 PF00293 NUDIX domain BGK55_02640 PF00210 Ferritin-like domain BGK55_02645 PF00672 HAMP domain BGK55_02645 PF01627 Hpt domain BGK55_02645 PF00512 His Kinase A (phospho-acceptor) domain BGK55_02645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_02645 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BGK55_02645 PF00072 Response regulator receiver domain BGK55_02650 PF00486 Transcriptional regulatory protein, C terminal BGK55_02650 PF00072 Response regulator receiver domain BGK55_02670 PF01521 Iron-sulphur cluster biosynthesis BGK55_02685 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain BGK55_02685 PF09297 NADH pyrophosphatase zinc ribbon domain BGK55_02685 PF00293 NUDIX domain BGK55_02690 PF03186 CobD/Cbib protein BGK55_02690 PF17113 Regulatory signalling modulator protein AmpE BGK55_02705 PF07690 Major Facilitator Superfamily BGK55_02715 PF07690 Major Facilitator Superfamily BGK55_02720 PF12805 FUSC-like inner membrane protein yccS BGK55_02730 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BGK55_02730 PF02843 Phosphoribosylglycinamide synthetase, C domain BGK55_02730 PF02844 Phosphoribosylglycinamide synthetase, N domain BGK55_02740 PF01808 AICARFT/IMPCHase bienzyme BGK55_02740 PF02142 MGS-like domain BGK55_02745 PF01066 CDP-alcohol phosphatidyltransferase BGK55_02750 PF12147 Putative methyltransferase BGK55_02750 PF12146 Serine aminopeptidase, S33 BGK55_02755 PF00782 Dual specificity phosphatase, catalytic domain BGK55_02785 PF02954 Bacterial regulatory protein, Fis family BGK55_02800 PF01381 Helix-turn-helix BGK55_02825 PF02785 Biotin carboxylase C-terminal domain BGK55_02825 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BGK55_02825 PF00289 Biotin carboxylase, N-terminal domain BGK55_02835 PF00364 Biotin-requiring enzyme BGK55_02840 PF01220 Dehydroquinase class II BGK55_02845 PF11412 Disulphide bond corrector protein DsbC BGK55_02845 PF02683 Cytochrome C biogenesis protein transmembrane region BGK55_02850 PF03091 CutA1 divalent ion tolerance protein BGK55_02865 PF01852 START domain BGK55_02875 PF00106 short chain dehydrogenase BGK55_02880 PF04231 Endonuclease I BGK55_02890 PF00166 Chaperonin 10 Kd subunit BGK55_02895 PF00118 TCP-1/cpn60 chaperonin family BGK55_02910 PF00793 DAHP synthetase I family BGK55_02925 PF08450 SMP-30/Gluconolactonase/LRE-like region BGK55_02935 PF03710 Glutamate-ammonia ligase adenylyltransferase BGK55_02935 PF08335 GlnD PII-uridylyltransferase BGK55_02940 PF02592 Putative vitamin uptake transporter BGK55_02960 PF00881 Nitroreductase family BGK55_02965 PF04264 YceI-like domain BGK55_02990 PF16957 Malonate decarboxylase, alpha subunit, transporter BGK55_02995 PF06857 Malonate decarboxylase delta subunit (MdcD) BGK55_03000 PF01039 Carboxyl transferase domain BGK55_03010 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG BGK55_03015 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase BGK55_03020 PF00698 Acyl transferase domain BGK55_03030 PF00392 Bacterial regulatory proteins, gntR family BGK55_03030 PF07729 FCD domain BGK55_03035 PF13419 Haloacid dehalogenase-like hydrolase BGK55_03070 PF00456 Transketolase, thiamine diphosphate binding domain BGK55_03070 PF17831 Pyruvate dehydrogenase E1 component middle domain BGK55_03105 PF00106 short chain dehydrogenase BGK55_03115 PF13409 Glutathione S-transferase, N-terminal domain BGK55_03140 PF12823 Domain of unknown function (DUF3817) BGK55_03140 PF03176 MMPL family BGK55_03145 PF00326 Prolyl oligopeptidase family BGK55_03145 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region BGK55_03150 PF07759 Protein of unknown function (DUF1615) BGK55_03155 PF05230 MASE2 domain BGK55_03155 PF00990 Diguanylate cyclase, GGDEF domain BGK55_03175 PF00892 EamA-like transporter family BGK55_03180 PF00497 Bacterial extracellular solute-binding proteins, family 3 BGK55_03190 PF00324 Amino acid permease BGK55_03200 PF01544 CorA-like Mg2+ transporter protein BGK55_03210 PF01204 Trehalase BGK55_03250 PF08448 PAS fold BGK55_03250 PF08447 PAS fold BGK55_03250 PF00990 Diguanylate cyclase, GGDEF domain BGK55_03250 PF00563 EAL domain BGK55_03255 PF02203 Tar ligand binding domain homologue BGK55_03255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGK55_03255 PF00672 HAMP domain BGK55_03260 PF00150 Cellulase (glycosyl hydrolase family 5) BGK55_03260 PF00553 Cellulose binding domain BGK55_03265 PF00916 Sulfate permease family BGK55_03265 PF01740 STAS domain BGK55_03270 PF08448 PAS fold BGK55_03270 PF00990 Diguanylate cyclase, GGDEF domain BGK55_03285 PF13632 Glycosyl transferase family group 2 BGK55_03295 PF07694 5TMR of 5TMR-LYT BGK55_03295 PF06580 Histidine kinase BGK55_03300 PF04397 LytTr DNA-binding domain BGK55_03300 PF00072 Response regulator receiver domain BGK55_03305 PF03900 Porphobilinogen deaminase, C-terminal domain BGK55_03305 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BGK55_03330 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BGK55_03330 PF00326 Prolyl oligopeptidase family BGK55_03340 PF00155 Aminotransferase class I and II BGK55_03345 PF00326 Prolyl oligopeptidase family BGK55_03345 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BGK55_03350 PF04304 Protein of unknown function (DUF454) BGK55_03360 PF01678 Diaminopimelate epimerase BGK55_03370 PF00589 Phage integrase family BGK55_03370 PF02899 Phage integrase, N-terminal SAM-like domain BGK55_03375 PF00227 Proteasome subunit BGK55_03380 PF10431 C-terminal, D2-small domain, of ClpB protein BGK55_03380 PF00004 ATPase family associated with various cellular activities (AAA) BGK55_03380 PF07724 AAA domain (Cdc48 subfamily) BGK55_03390 PF13673 Acetyltransferase (GNAT) domain BGK55_03395 PF13533 Biotin-lipoyl like BGK55_03405 PF01209 ubiE/COQ5 methyltransferase family BGK55_03410 PF17156 Gammaproteobacterial periplasmic sensor domain BGK55_03410 PF00990 Diguanylate cyclase, GGDEF domain BGK55_03415 PF11838 ERAP1-like C-terminal domain BGK55_03415 PF01433 Peptidase family M1 domain BGK55_03435 PF13360 PQQ-like domain BGK55_03440 PF00497 Bacterial extracellular solute-binding proteins, family 3 BGK55_03455 PF00107 Zinc-binding dehydrogenase BGK55_03455 PF08240 Alcohol dehydrogenase GroES-like domain BGK55_03465 PF00158 Sigma-54 interaction domain BGK55_03465 PF01590 GAF domain BGK55_03465 PF02954 Bacterial regulatory protein, Fis family BGK55_03470 PF00294 pfkB family carbohydrate kinase BGK55_03480 PF04085 rod shape-determining protein MreC BGK55_03490 PF03717 Penicillin-binding Protein dimerisation domain BGK55_03490 PF00905 Penicillin binding protein transpeptidase domain BGK55_03495 PF01098 Cell cycle protein BGK55_03500 PF00295 Glycosyl hydrolases family 28 BGK55_03505 PF13406 Transglycosylase SLT domain BGK55_03510 PF05036 Sporulation related domain BGK55_03510 PF03330 Lytic transglycolase BGK55_03520 PF07943 Penicillin-binding protein 5, C-terminal domain BGK55_03520 PF00768 D-alanyl-D-alanine carboxypeptidase BGK55_03530 PF04359 Protein of unknown function (DUF493) BGK55_03535 PF03099 Biotin/lipoate A/B protein ligase family BGK55_03540 PF04055 Radical SAM superfamily BGK55_03540 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BGK55_03545 PF11818 C-terminal domain of tail specific protease (DUF3340) BGK55_03545 PF17804 Tail specific protease N-terminal domain BGK55_03545 PF03572 Peptidase family S41 BGK55_03545 PF00595 PDZ domain BGK55_03555 PF03466 LysR substrate binding domain BGK55_03555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGK55_03565 PF00293 NUDIX domain BGK55_03565 PF01467 Cytidylyltransferase-like BGK55_03600 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BGK55_03600 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BGK55_03605 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BGK55_03605 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BGK55_03610 PF04972 BON domain BGK55_03615 PF08446 PAS fold BGK55_03615 PF00360 Phytochrome region BGK55_03615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_03615 PF00512 His Kinase A (phospho-acceptor) domain BGK55_03615 PF01590 GAF domain BGK55_03620 PF00072 Response regulator receiver domain BGK55_03625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_03625 PF00512 His Kinase A (phospho-acceptor) domain BGK55_03630 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BGK55_03635 PF00106 short chain dehydrogenase BGK55_03675 PF00263 Bacterial type II and III secretion system protein BGK55_03675 PF03958 Bacterial type II/III secretion system short domain BGK55_03680 PF00437 Type II/IV secretion system protein BGK55_03685 PF00482 Type II secretion system (T2SS), protein F BGK55_03690 PF07963 Prokaryotic N-terminal methylation motif BGK55_03690 PF08334 Type II secretion system (T2SS), protein G BGK55_03695 PF07963 Prokaryotic N-terminal methylation motif BGK55_03695 PF12019 Type II transport protein GspH BGK55_03700 PF02501 Type II secretion system (T2SS), protein I BGK55_03700 PF07963 Prokaryotic N-terminal methylation motif BGK55_03705 PF11612 Type II secretion system (T2SS), protein J BGK55_03705 PF07963 Prokaryotic N-terminal methylation motif BGK55_03710 PF03934 Type II secretion system (T2SS), protein K BGK55_03735 PF00703 Glycosyl hydrolases family 2 BGK55_03735 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 BGK55_03735 PF02837 Glycosyl hydrolases family 2, sugar binding domain BGK55_03735 PF16355 Domain of unknown function (DUF4982) BGK55_03735 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BGK55_03755 PF07690 Major Facilitator Superfamily BGK55_03760 PF00356 Bacterial regulatory proteins, lacI family BGK55_03765 PF01380 SIS domain BGK55_03770 PF01979 Amidohydrolase family BGK55_03780 PF01966 HD domain BGK55_03780 PF01743 Poly A polymerase head domain BGK55_03780 PF12627 Probable RNA and SrmB- binding site of polymerase A BGK55_03785 PF05199 GMC oxidoreductase BGK55_03785 PF00732 GMC oxidoreductase BGK55_03790 PF00171 Aldehyde dehydrogenase family BGK55_03795 PF02028 BCCT, betaine/carnitine/choline family transporter BGK55_03810 PF01323 DSBA-like thioredoxin domain BGK55_03820 PF00034 Cytochrome c BGK55_03825 PF01926 50S ribosome-binding GTPase BGK55_03830 PF10996 Beta-Casp domain BGK55_03830 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BGK55_03830 PF00753 Metallo-beta-lactamase superfamily BGK55_03840 PF04107 Glutamate-cysteine ligase family 2(GCS2) BGK55_03845 PF00512 His Kinase A (phospho-acceptor) domain BGK55_03845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_03845 PF00672 HAMP domain BGK55_03850 PF00072 Response regulator receiver domain BGK55_03850 PF00486 Transcriptional regulatory protein, C terminal BGK55_03865 PF02583 Metal-sensitive transcriptional repressor BGK55_03870 PF00107 Zinc-binding dehydrogenase BGK55_03870 PF08240 Alcohol dehydrogenase GroES-like domain BGK55_03875 PF04828 Glutathione-dependent formaldehyde-activating enzyme BGK55_03880 PF00756 Putative esterase BGK55_03890 PF00392 Bacterial regulatory proteins, gntR family BGK55_03890 PF00155 Aminotransferase class I and II BGK55_03895 PF02567 Phenazine biosynthesis-like protein BGK55_03900 PF00892 EamA-like transporter family BGK55_03910 PF00005 ABC transporter BGK55_03910 PF12848 ABC transporter BGK55_03920 PF00464 Serine hydroxymethyltransferase BGK55_03925 PF03477 ATP cone domain BGK55_03935 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BGK55_03935 PF01872 RibD C-terminal domain BGK55_03945 PF00677 Lumazine binding domain BGK55_03950 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BGK55_03950 PF00925 GTP cyclohydrolase II BGK55_03955 PF00885 6,7-dimethyl-8-ribityllumazine synthase BGK55_03960 PF01029 NusB family BGK55_03965 PF00586 AIR synthase related protein, N-terminal domain BGK55_03965 PF02769 AIR synthase related protein, C-terminal domain BGK55_03985 PF03814 Potassium-transporting ATPase A subunit BGK55_03995 PF02669 K+-transporting ATPase, c chain BGK55_04000 PF00512 His Kinase A (phospho-acceptor) domain BGK55_04000 PF02702 Osmosensitive K+ channel His kinase sensor domain BGK55_04000 PF13493 Domain of unknown function (DUF4118) BGK55_04000 PF13492 GAF domain BGK55_04000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_04005 PF00486 Transcriptional regulatory protein, C terminal BGK55_04005 PF00072 Response regulator receiver domain BGK55_04020 PF01565 FAD binding domain BGK55_04020 PF02913 FAD linked oxidases, C-terminal domain BGK55_04025 PF04307 LexA-binding, inner membrane-associated putative hydrolase BGK55_04030 PF02021 Uncharacterised protein family UPF0102 BGK55_04040 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BGK55_04060 PF02381 MraZ protein, putative antitoxin-like BGK55_04065 PF01795 MraW methylase family BGK55_04070 PF04999 Cell division protein FtsL BGK55_04075 PF00905 Penicillin binding protein transpeptidase domain BGK55_04075 PF03717 Penicillin-binding Protein dimerisation domain BGK55_04080 PF02875 Mur ligase family, glutamate ligase domain BGK55_04080 PF08245 Mur ligase middle domain BGK55_04080 PF01225 Mur ligase family, catalytic domain BGK55_04085 PF02875 Mur ligase family, glutamate ligase domain BGK55_04085 PF01225 Mur ligase family, catalytic domain BGK55_04085 PF08245 Mur ligase middle domain BGK55_04090 PF00953 Glycosyl transferase family 4 BGK55_04095 PF01098 Cell cycle protein BGK55_04100 PF04101 Glycosyltransferase family 28 C-terminal domain BGK55_04100 PF03033 Glycosyltransferase family 28 N-terminal domain BGK55_04105 PF01225 Mur ligase family, catalytic domain BGK55_04105 PF02875 Mur ligase family, glutamate ligase domain BGK55_04105 PF08245 Mur ligase middle domain BGK55_04110 PF01820 D-ala D-ala ligase N-terminus BGK55_04110 PF07478 D-ala D-ala ligase C-terminus BGK55_04115 PF08478 POTRA domain, FtsQ-type BGK55_04115 PF03799 Cell division protein FtsQ BGK55_04120 PF02491 SHS2 domain inserted in FTSA BGK55_04125 PF00091 Tubulin/FtsZ family, GTPase domain BGK55_04125 PF12327 FtsZ family, C-terminal domain BGK55_04130 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BGK55_04140 PF01476 LysM domain BGK55_04140 PF08525 Opacity-associated protein A N-terminal motif BGK55_04140 PF01551 Peptidase family M23 BGK55_04145 PF07517 SecA DEAD-like domain BGK55_04145 PF02810 SEC-C motif BGK55_04145 PF07516 SecA Wing and Scaffold domain BGK55_04145 PF01043 SecA preprotein cross-linking domain BGK55_04150 PF00293 NUDIX domain BGK55_04160 PF02219 Methylenetetrahydrofolate reductase BGK55_04170 PF00550 Phosphopantetheine attachment site BGK55_04170 PF02801 Beta-ketoacyl synthase, C-terminal domain BGK55_04170 PF00107 Zinc-binding dehydrogenase BGK55_04170 PF08659 KR domain BGK55_04170 PF16197 Ketoacyl-synthetase C-terminal extension BGK55_04170 PF00109 Beta-ketoacyl synthase, N-terminal domain BGK55_04170 PF00698 Acyl transferase domain BGK55_04170 PF08240 Alcohol dehydrogenase GroES-like domain BGK55_04170 PF14765 Polyketide synthase dehydratase BGK55_04175 PF09286 Pro-kumamolisin, activation domain BGK55_04175 PF00082 Subtilase family BGK55_04190 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BGK55_04195 PF00128 Alpha amylase, catalytic domain BGK55_04220 PF13649 Methyltransferase domain BGK55_04225 PF05221 S-adenosyl-L-homocysteine hydrolase BGK55_04225 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BGK55_04235 PF00311 Phosphoenolpyruvate carboxylase BGK55_04265 PF00328 Histidine phosphatase superfamily (branch 2) BGK55_04270 PF02772 S-adenosylmethionine synthetase, central domain BGK55_04270 PF00438 S-adenosylmethionine synthetase, N-terminal domain BGK55_04270 PF02773 S-adenosylmethionine synthetase, C-terminal domain BGK55_04280 PF13649 Methyltransferase domain BGK55_04285 PF01207 Dihydrouridine synthase (Dus) BGK55_04295 PF00294 pfkB family carbohydrate kinase BGK55_04300 PF07670 Nucleoside recognition BGK55_04300 PF01773 Na+ dependent nucleoside transporter N-terminus BGK55_04300 PF07662 Na+ dependent nucleoside transporter C-terminus BGK55_04305 PF00248 Aldo/keto reductase family BGK55_04315 PF07715 TonB-dependent Receptor Plug Domain BGK55_04315 PF00593 TonB dependent receptor BGK55_04335 PF00528 Binding-protein-dependent transport system inner membrane component BGK55_04340 PF00005 ABC transporter BGK55_04350 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BGK55_04360 PF00005 ABC transporter BGK55_04365 PF13472 GDSL-like Lipase/Acylhydrolase family BGK55_04370 PF00072 Response regulator receiver domain BGK55_04370 PF00486 Transcriptional regulatory protein, C terminal BGK55_04375 PF00512 His Kinase A (phospho-acceptor) domain BGK55_04375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_04375 PF08521 Two-component sensor kinase N-terminal BGK55_04390 PF01219 Prokaryotic diacylglycerol kinase BGK55_04410 PF01790 Prolipoprotein diacylglyceryl transferase BGK55_04415 PF00303 Thymidylate synthase BGK55_04425 PF00186 Dihydrofolate reductase BGK55_04430 PF00158 Sigma-54 interaction domain BGK55_04435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BGK55_04435 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BGK55_04440 PF00005 ABC transporter BGK55_04445 PF00528 Binding-protein-dependent transport system inner membrane component BGK55_04455 PF00296 Luciferase-like monooxygenase BGK55_04460 PF03358 NADPH-dependent FMN reductase BGK55_04480 PF00296 Luciferase-like monooxygenase BGK55_04485 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BGK55_04490 PF00528 Binding-protein-dependent transport system inner membrane component BGK55_04495 PF12911 N-terminal TM domain of oligopeptide transport permease C BGK55_04495 PF00528 Binding-protein-dependent transport system inner membrane component BGK55_04505 PF00149 Calcineurin-like phosphoesterase BGK55_04510 PF04379 ApaG domain BGK55_04515 PF00398 Ribosomal RNA adenine dimethylase BGK55_04520 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BGK55_04525 PF09312 SurA N-terminal domain BGK55_04525 PF00639 PPIC-type PPIASE domain BGK55_04530 PF04453 LPS transport system D BGK55_04530 PF03968 OstA-like protein BGK55_04540 PF00850 Histone deacetylase domain BGK55_04545 PF01923 Cobalamin adenosyltransferase BGK55_04555 PF01494 FAD binding domain BGK55_04560 PF01494 FAD binding domain BGK55_04590 PF07729 FCD domain BGK55_04590 PF00392 Bacterial regulatory proteins, gntR family BGK55_04595 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BGK55_04600 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit BGK55_04600 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BGK55_04605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGK55_04605 PF03466 LysR substrate binding domain BGK55_04610 PF13193 AMP-binding enzyme C-terminal domain BGK55_04610 PF00501 AMP-binding enzyme BGK55_04620 PF00378 Enoyl-CoA hydratase/isomerase BGK55_04640 PF08450 SMP-30/Gluconolactonase/LRE-like region BGK55_04645 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BGK55_04645 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BGK55_04685 PF00892 EamA-like transporter family BGK55_04695 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BGK55_04695 PF00749 tRNA synthetases class I (E and Q), catalytic domain BGK55_04710 PF00990 Diguanylate cyclase, GGDEF domain BGK55_04710 PF00072 Response regulator receiver domain BGK55_04715 PF00672 HAMP domain BGK55_04715 PF17149 Periplasmic sensor domain found in signal transduction proteins BGK55_04715 PF00072 Response regulator receiver domain BGK55_04715 PF01627 Hpt domain BGK55_04715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_04715 PF00512 His Kinase A (phospho-acceptor) domain BGK55_04720 PF00196 Bacterial regulatory proteins, luxR family BGK55_04720 PF00072 Response regulator receiver domain BGK55_04730 PF01625 Peptide methionine sulfoxide reductase BGK55_04740 PF00923 Transaldolase/Fructose-6-phosphate aldolase BGK55_04745 PF14760 Rnk N-terminus BGK55_04745 PF01272 Transcription elongation factor, GreA/GreB, C-term BGK55_04750 PF03466 LysR substrate binding domain BGK55_04750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGK55_04755 PF07992 Pyridine nucleotide-disulphide oxidoreductase BGK55_04755 PF13192 Thioredoxin domain BGK55_04760 PF00578 AhpC/TSA family BGK55_04760 PF10417 C-terminal domain of 1-Cys peroxiredoxin BGK55_04765 PF05175 Methyltransferase small domain BGK55_04765 PF17827 PrmC N-terminal domain BGK55_04770 PF00561 alpha/beta hydrolase fold BGK55_04780 PF00293 NUDIX domain BGK55_04785 PF00476 DNA polymerase family A BGK55_04785 PF01612 3'-5' exonuclease BGK55_04785 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BGK55_04785 PF01367 5'-3' exonuclease, C-terminal SAM fold BGK55_04815 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BGK55_04815 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BGK55_04815 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BGK55_04835 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BGK55_04840 PF02233 NAD(P) transhydrogenase beta subunit BGK55_04855 PF01063 Amino-transferase class IV BGK55_04870 PF00082 Subtilase family BGK55_04870 PF04151 Bacterial pre-peptidase C-terminal domain BGK55_04875 PF04073 Aminoacyl-tRNA editing domain BGK55_04885 PF17189 Glycosyl hydrolase family 30 beta sandwich domain BGK55_04885 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain BGK55_04895 PF03358 NADPH-dependent FMN reductase BGK55_04900 PF03631 Virulence factor BrkB BGK55_04905 PF08534 Redoxin BGK55_04910 PF00708 Acylphosphatase BGK55_04920 PF03976 Polyphosphate kinase 2 (PPK2) BGK55_04925 PF00994 Probable molybdopterin binding domain BGK55_04935 PF00472 RF-1 domain BGK55_04935 PF03462 PCRF domain BGK55_04940 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BGK55_04940 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BGK55_04940 PF01488 Shikimate / quinate 5-dehydrogenase BGK55_04950 PF03550 Outer membrane lipoprotein LolB BGK55_04955 PF08544 GHMP kinases C terminal BGK55_04955 PF00288 GHMP kinases N terminal domain BGK55_04965 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BGK55_04965 PF14572 Phosphoribosyl synthetase-associated domain BGK55_04970 PF14693 Ribosomal protein TL5, C-terminal domain BGK55_04970 PF01386 Ribosomal L25p family BGK55_04975 PF01195 Peptidyl-tRNA hydrolase BGK55_04980 PF01926 50S ribosome-binding GTPase BGK55_04980 PF06071 Protein of unknown function (DUF933) BGK55_05000 PF00009 Elongation factor Tu GTP binding domain BGK55_05000 PF03143 Elongation factor Tu C-terminal domain BGK55_05000 PF03144 Elongation factor Tu domain 2 BGK55_05010 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BGK55_05015 PF00467 KOW motif BGK55_05015 PF02357 Transcription termination factor nusG BGK55_05020 PF00298 Ribosomal protein L11, RNA binding domain BGK55_05020 PF03946 Ribosomal protein L11, N-terminal domain BGK55_05025 PF00687 Ribosomal protein L1p/L10e family BGK55_05030 PF00466 Ribosomal protein L10 BGK55_05035 PF00542 Ribosomal protein L7/L12 C-terminal domain BGK55_05035 PF16320 Ribosomal protein L7/L12 dimerisation domain BGK55_05040 PF04560 RNA polymerase Rpb2, domain 7 BGK55_05040 PF04563 RNA polymerase beta subunit BGK55_05040 PF10385 RNA polymerase beta subunit external 1 domain BGK55_05040 PF04565 RNA polymerase Rpb2, domain 3 BGK55_05040 PF04561 RNA polymerase Rpb2, domain 2 BGK55_05040 PF00562 RNA polymerase Rpb2, domain 6 BGK55_05045 PF04997 RNA polymerase Rpb1, domain 1 BGK55_05045 PF04998 RNA polymerase Rpb1, domain 5 BGK55_05045 PF00623 RNA polymerase Rpb1, domain 2 BGK55_05045 PF04983 RNA polymerase Rpb1, domain 3 BGK55_05045 PF05000 RNA polymerase Rpb1, domain 4 BGK55_05050 PF00164 Ribosomal protein S12/S23 BGK55_05055 PF00177 Ribosomal protein S7p/S5e BGK55_05060 PF03144 Elongation factor Tu domain 2 BGK55_05060 PF03764 Elongation factor G, domain IV BGK55_05060 PF14492 Elongation Factor G, domain II BGK55_05060 PF00679 Elongation factor G C-terminus BGK55_05060 PF00009 Elongation factor Tu GTP binding domain BGK55_05065 PF03144 Elongation factor Tu domain 2 BGK55_05065 PF00009 Elongation factor Tu GTP binding domain BGK55_05065 PF03143 Elongation factor Tu C-terminal domain BGK55_05070 PF00338 Ribosomal protein S10p/S20e BGK55_05075 PF00297 Ribosomal protein L3 BGK55_05080 PF00573 Ribosomal protein L4/L1 family BGK55_05085 PF00276 Ribosomal protein L23 BGK55_05090 PF00181 Ribosomal Proteins L2, RNA binding domain BGK55_05090 PF03947 Ribosomal Proteins L2, C-terminal domain BGK55_05095 PF00203 Ribosomal protein S19 BGK55_05100 PF00237 Ribosomal protein L22p/L17e BGK55_05105 PF07650 KH domain BGK55_05105 PF00189 Ribosomal protein S3, C-terminal domain BGK55_05110 PF00252 Ribosomal protein L16p/L10e BGK55_05115 PF00831 Ribosomal L29 protein BGK55_05120 PF00366 Ribosomal protein S17 BGK55_05125 PF00238 Ribosomal protein L14p/L23e BGK55_05130 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BGK55_05130 PF00467 KOW motif BGK55_05135 PF00281 Ribosomal protein L5 BGK55_05135 PF00673 ribosomal L5P family C-terminus BGK55_05140 PF00253 Ribosomal protein S14p/S29e BGK55_05145 PF00410 Ribosomal protein S8 BGK55_05150 PF00347 Ribosomal protein L6 BGK55_05155 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BGK55_05160 PF00333 Ribosomal protein S5, N-terminal domain BGK55_05160 PF03719 Ribosomal protein S5, C-terminal domain BGK55_05165 PF00327 Ribosomal protein L30p/L7e BGK55_05170 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BGK55_05175 PF00344 SecY translocase BGK55_05180 PF00416 Ribosomal protein S13/S18 BGK55_05185 PF00411 Ribosomal protein S11 BGK55_05190 PF01479 S4 domain BGK55_05190 PF00163 Ribosomal protein S4/S9 N-terminal domain BGK55_05195 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BGK55_05195 PF01000 RNA polymerase Rpb3/RpoA insert domain BGK55_05195 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BGK55_05200 PF01196 Ribosomal protein L17 BGK55_05205 PF02600 Disulfide bond formation protein DsbB BGK55_05220 PF01474 Class-II DAHP synthetase family BGK55_05230 PF01425 Amidase BGK55_05245 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BGK55_05250 PF00056 lactate/malate dehydrogenase, NAD binding domain BGK55_05250 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BGK55_05255 PF00665 Integrase core domain BGK55_05255 PF13276 HTH-like domain BGK55_05255 PF13333 Integrase core domain BGK55_05275 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BGK55_05275 PF07992 Pyridine nucleotide-disulphide oxidoreductase BGK55_05280 PF00107 Zinc-binding dehydrogenase BGK55_05280 PF08240 Alcohol dehydrogenase GroES-like domain BGK55_05285 PF00691 OmpA family BGK55_05285 PF05736 OprF membrane domain BGK55_05295 PF00849 RNA pseudouridylate synthase BGK55_05305 PF00155 Aminotransferase class I and II BGK55_05315 PF00528 Binding-protein-dependent transport system inner membrane component BGK55_05320 PF00528 Binding-protein-dependent transport system inner membrane component BGK55_05325 PF00005 ABC transporter BGK55_05325 PF17850 CysA C-terminal regulatory domain BGK55_05325 PF12857 TOBE-like domain BGK55_05335 PF00107 Zinc-binding dehydrogenase BGK55_05335 PF08240 Alcohol dehydrogenase GroES-like domain BGK55_05350 PF04185 Phosphoesterase family BGK55_05350 PF05506 Domain of unknown function (DUF756) BGK55_05355 PF10459 Peptidase S46 BGK55_05360 PF10459 Peptidase S46 BGK55_05365 PF00300 Histidine phosphatase superfamily (branch 1) BGK55_05370 PF02875 Mur ligase family, glutamate ligase domain BGK55_05370 PF08245 Mur ligase middle domain BGK55_05385 PF00156 Phosphoribosyl transferase domain BGK55_05390 PF04305 Protein of unknown function (DUF455) BGK55_05410 PF00149 Calcineurin-like phosphoesterase BGK55_05415 PF01569 PAP2 superfamily BGK55_05420 PF13439 Glycosyltransferase Family 4 BGK55_05420 PF00534 Glycosyl transferases group 1 BGK55_05425 PF02541 Ppx/GppA phosphatase family BGK55_05430 PF13090 Polyphosphate kinase C-terminal domain 2 BGK55_05430 PF13089 Polyphosphate kinase N-terminal domain BGK55_05430 PF02503 Polyphosphate kinase middle domain BGK55_05430 PF17941 Polyphosphate kinase C-terminal domain 1 BGK55_05435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_05435 PF00989 PAS fold BGK55_05435 PF11808 Phosphate regulon sensor protein PhoR BGK55_05435 PF00512 His Kinase A (phospho-acceptor) domain BGK55_05440 PF00486 Transcriptional regulatory protein, C terminal BGK55_05440 PF00072 Response regulator receiver domain BGK55_05445 PF01435 Peptidase family M48 BGK55_05445 PF13181 Tetratricopeptide repeat BGK55_05450 PF00462 Glutaredoxin BGK55_05460 PF00180 Isocitrate/isopropylmalate dehydrogenase BGK55_05530 PF00182 Chitinase class I BGK55_05590 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BGK55_05590 PF00128 Alpha amylase, catalytic domain BGK55_05595 PF08443 RimK-like ATP-grasp domain BGK55_05595 PF18030 RimK PreATP-grasp domain BGK55_05605 PF00486 Transcriptional regulatory protein, C terminal BGK55_05605 PF00072 Response regulator receiver domain BGK55_05610 PF00989 PAS fold BGK55_05610 PF16736 Single Cache-like BGK55_05610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_05610 PF00512 His Kinase A (phospho-acceptor) domain BGK55_05635 PF00665 Integrase core domain BGK55_05635 PF13333 Integrase core domain BGK55_05635 PF13276 HTH-like domain BGK55_05640 PF01121 Dephospho-CoA kinase BGK55_05645 PF06750 Bacterial Peptidase A24 N-terminal domain BGK55_05645 PF01478 Type IV leader peptidase family BGK55_05650 PF00482 Type II secretion system (T2SS), protein F BGK55_05665 PF00893 Small Multidrug Resistance protein BGK55_05685 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BGK55_05685 PF00437 Type II/IV secretion system protein BGK55_05690 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BGK55_05690 PF00437 Type II/IV secretion system protein BGK55_05695 PF00072 Response regulator receiver domain BGK55_05695 PF00158 Sigma-54 interaction domain BGK55_05695 PF02954 Bacterial regulatory protein, Fis family BGK55_05700 PF00512 His Kinase A (phospho-acceptor) domain BGK55_05700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_05705 PF00549 CoA-ligase BGK55_05705 PF08442 ATP-grasp domain BGK55_05710 PF00549 CoA-ligase BGK55_05710 PF02629 CoA binding domain BGK55_05725 PF00795 Carbon-nitrogen hydrolase BGK55_05725 PF02540 NAD synthase BGK55_05735 PF13525 Outer membrane lipoprotein BGK55_05740 PF00849 RNA pseudouridylate synthase BGK55_05755 PF04134 Protein of unknown function, DUF393 BGK55_05760 PF00672 HAMP domain BGK55_05760 PF02203 Tar ligand binding domain homologue BGK55_05760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGK55_05765 PF01011 PQQ enzyme repeat BGK55_05770 PF00982 Glycosyltransferase family 20 BGK55_05775 PF00723 Glycosyl hydrolases family 15 BGK55_05780 PF02358 Trehalose-phosphatase BGK55_05785 PF07715 TonB-dependent Receptor Plug Domain BGK55_05785 PF00593 TonB dependent receptor BGK55_05820 PF01541 GIY-YIG catalytic domain BGK55_05825 PF00593 TonB dependent receptor BGK55_05825 PF07715 TonB-dependent Receptor Plug Domain BGK55_05850 PF00665 Integrase core domain BGK55_05850 PF13333 Integrase core domain BGK55_05850 PF13276 HTH-like domain BGK55_05855 PF00528 Binding-protein-dependent transport system inner membrane component BGK55_05860 PF00005 ABC transporter BGK55_05865 PF00004 ATPase family associated with various cellular activities (AAA) BGK55_05865 PF10431 C-terminal, D2-small domain, of ClpB protein BGK55_05865 PF07724 AAA domain (Cdc48 subfamily) BGK55_05865 PF17871 AAA lid domain BGK55_05865 PF02861 Clp amino terminal domain, pathogenicity island component BGK55_05870 PF00593 TonB dependent receptor BGK55_05870 PF07715 TonB-dependent Receptor Plug Domain BGK55_05885 PF12557 Cob(I)alamin adenosyltransferase N terminal BGK55_05885 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP BGK55_05890 PF03186 CobD/Cbib protein BGK55_05890 PF17113 Regulatory signalling modulator protein AmpE BGK55_05895 PF00155 Aminotransferase class I and II BGK55_05900 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BGK55_05900 PF07685 CobB/CobQ-like glutamine amidotransferase domain BGK55_05905 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase BGK55_05910 PF02277 Phosphoribosyltransferase BGK55_05920 PF02654 Cobalamin-5-phosphate synthase BGK55_05930 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BGK55_05930 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BGK55_05940 PF07690 Major Facilitator Superfamily BGK55_05945 PF06276 Ferric iron reductase FhuF-like transporter BGK55_05945 PF04183 IucA / IucC family BGK55_05955 PF00593 TonB dependent receptor BGK55_05955 PF07715 TonB-dependent Receptor Plug Domain BGK55_05955 PF07660 Secretin and TonB N terminus short domain BGK55_05980 PF02254 TrkA-N domain BGK55_05980 PF00999 Sodium/hydrogen exchanger family BGK55_05985 PF00067 Cytochrome P450 BGK55_05990 PF00593 TonB dependent receptor BGK55_05990 PF07715 TonB-dependent Receptor Plug Domain BGK55_05995 PF00593 TonB dependent receptor BGK55_05995 PF07715 TonB-dependent Receptor Plug Domain BGK55_06010 PF00593 TonB dependent receptor BGK55_06010 PF07715 TonB-dependent Receptor Plug Domain BGK55_06015 PF12848 ABC transporter BGK55_06015 PF00005 ABC transporter BGK55_06025 PF03466 LysR substrate binding domain BGK55_06025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGK55_06040 PF04185 Phosphoesterase family BGK55_06040 PF05506 Domain of unknown function (DUF756) BGK55_06050 PF07690 Major Facilitator Superfamily BGK55_06065 PF00152 tRNA synthetases class II (D, K and N) BGK55_06065 PF01336 OB-fold nucleic acid binding domain BGK55_06065 PF02938 GAD domain BGK55_06080 PF01709 Transcriptional regulator BGK55_06085 PF02075 Crossover junction endodeoxyribonuclease RuvC BGK55_06090 PF07499 RuvA, C-terminal domain BGK55_06090 PF01330 RuvA N terminal domain BGK55_06095 PF02705 K+ potassium transporter BGK55_06105 PF17864 RuvB AAA lid domain BGK55_06105 PF05491 RuvB C-terminal winged helix domain BGK55_06105 PF05496 Holliday junction DNA helicase RuvB P-loop domain BGK55_06110 PF03061 Thioesterase superfamily BGK55_06115 PF01618 MotA/TolQ/ExbB proton channel family BGK55_06120 PF02472 Biopolymer transport protein ExbD/TolR BGK55_06130 PF04052 TolB amino-terminal domain BGK55_06130 PF07676 WD40-like Beta Propeller Repeat BGK55_06135 PF00691 OmpA family BGK55_06145 PF04055 Radical SAM superfamily BGK55_06155 PF06508 Queuosine biosynthesis protein QueC BGK55_06160 PF13426 PAS domain BGK55_06160 PF07536 HWE histidine kinase BGK55_06160 PF13581 Histidine kinase-like ATPase domain BGK55_06180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGK55_06180 PF02203 Tar ligand binding domain homologue BGK55_06180 PF00672 HAMP domain BGK55_06210 PF16124 RecQ zinc-binding BGK55_06210 PF09382 RQC domain BGK55_06210 PF00570 HRDC domain BGK55_06210 PF00271 Helicase conserved C-terminal domain BGK55_06210 PF00270 DEAD/DEAH box helicase BGK55_06215 PF00210 Ferritin-like domain BGK55_06220 PF00271 Helicase conserved C-terminal domain BGK55_06220 PF04408 Helicase associated domain (HA2) BGK55_06220 PF11898 Domain of unknown function (DUF3418) BGK55_06220 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BGK55_06220 PF00270 DEAD/DEAH box helicase BGK55_06235 PF02685 Glucokinase BGK55_06250 PF04055 Radical SAM superfamily BGK55_06250 PF13186 Iron-sulfur cluster-binding domain BGK55_06255 PF05402 Coenzyme PQQ synthesis protein D (PqqD) BGK55_06260 PF03070 TENA/THI-4/PQQC family BGK55_06265 PF12706 Beta-lactamase superfamily domain BGK55_06270 PF13291 ACT domain BGK55_06270 PF04607 Region found in RelA / SpoT proteins BGK55_06270 PF02824 TGS domain BGK55_06280 PF00535 Glycosyl transferase family 2 BGK55_06295 PF13307 Helicase C-terminal domain BGK55_06295 PF04851 Type III restriction enzyme, res subunit BGK55_06300 PF00814 Glycoprotease family BGK55_06305 PF03747 ADP-ribosylglycohydrolase BGK55_06315 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BGK55_06315 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BGK55_06320 PF00072 Response regulator receiver domain BGK55_06325 PF00072 Response regulator receiver domain BGK55_06330 PF01584 CheW-like domain BGK55_06335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGK55_06335 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term BGK55_06340 PF01627 Hpt domain BGK55_06340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_06340 PF01584 CheW-like domain BGK55_06340 PF00072 Response regulator receiver domain BGK55_06355 PF13302 Acetyltransferase (GNAT) domain BGK55_06365 PF01112 Asparaginase BGK55_06370 PF03932 CutC family BGK55_06400 PF01301 Glycosyl hydrolases family 35 BGK55_06405 PF07971 Glycosyl hydrolase family 92 BGK55_06405 PF17678 Glycosyl hydrolase family 92 N-terminal domain BGK55_06430 PF00933 Glycosyl hydrolase family 3 N terminal domain BGK55_06430 PF07691 PA14 domain BGK55_06430 PF14310 Fibronectin type III-like domain BGK55_06430 PF01915 Glycosyl hydrolase family 3 C-terminal domain BGK55_06440 PF02838 Glycosyl hydrolase family 20, domain 2 BGK55_06440 PF00728 Glycosyl hydrolase family 20, catalytic domain BGK55_06440 PF07691 PA14 domain BGK55_06445 PF00704 Glycosyl hydrolases family 18 BGK55_06445 PF01476 LysM domain BGK55_06460 PF02685 Glucokinase BGK55_06465 PF04452 RNA methyltransferase BGK55_06470 PF00202 Aminotransferase class-III BGK55_06475 PF00293 NUDIX domain BGK55_06480 PF00459 Inositol monophosphatase family BGK55_06485 PF03819 MazG nucleotide pyrophosphohydrolase domain BGK55_06490 PF02694 Uncharacterised BCR, YnfA/UPF0060 family BGK55_06500 PF08669 Glycine cleavage T-protein C-terminal barrel domain BGK55_06500 PF01571 Aminomethyltransferase folate-binding domain BGK55_06505 PF01597 Glycine cleavage H-protein BGK55_06530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BGK55_06530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BGK55_06530 PF09317 Domain of unknown function (DUF1974) BGK55_06535 PF00561 alpha/beta hydrolase fold BGK55_06540 PF00440 Bacterial regulatory proteins, tetR family BGK55_06560 PF00593 TonB dependent receptor BGK55_06560 PF07715 TonB-dependent Receptor Plug Domain BGK55_06570 PF01430 Hsp33 protein BGK55_06575 PF00912 Transglycosylase BGK55_06580 PF00535 Glycosyl transferase family 2 BGK55_06585 PF00571 CBS domain BGK55_06585 PF00478 IMP dehydrogenase / GMP reductase domain BGK55_06590 PF05170 AsmA family BGK55_06595 PF03006 Haemolysin-III related BGK55_06600 PF16658 Class II release factor RF3, C-terminal domain BGK55_06600 PF00009 Elongation factor Tu GTP binding domain BGK55_06605 PF01551 Peptidase family M23 BGK55_06605 PF08525 Opacity-associated protein A N-terminal motif BGK55_06605 PF01476 LysM domain BGK55_06610 PF00561 alpha/beta hydrolase fold BGK55_06615 PF01053 Cys/Met metabolism PLP-dependent enzyme BGK55_06620 PF03447 Homoserine dehydrogenase, NAD binding domain BGK55_06620 PF00742 Homoserine dehydrogenase BGK55_06620 PF00696 Amino acid kinase family BGK55_06625 PF00561 alpha/beta hydrolase fold BGK55_06630 PF03313 Serine dehydratase alpha chain BGK55_06630 PF03315 Serine dehydratase beta chain BGK55_06650 PF04264 YceI-like domain BGK55_06655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_06655 PF01627 Hpt domain BGK55_06655 PF00072 Response regulator receiver domain BGK55_06655 PF00512 His Kinase A (phospho-acceptor) domain BGK55_06665 PF17149 Periplasmic sensor domain found in signal transduction proteins BGK55_06665 PF00672 HAMP domain BGK55_06665 PF00072 Response regulator receiver domain BGK55_06665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_06665 PF00512 His Kinase A (phospho-acceptor) domain BGK55_06665 PF01627 Hpt domain BGK55_06670 PF00072 Response regulator receiver domain BGK55_06670 PF01627 Hpt domain BGK55_06670 PF00512 His Kinase A (phospho-acceptor) domain BGK55_06670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_06670 PF00672 HAMP domain BGK55_06670 PF17149 Periplasmic sensor domain found in signal transduction proteins BGK55_06675 PF07690 Major Facilitator Superfamily BGK55_06680 PF01208 Uroporphyrinogen decarboxylase (URO-D) BGK55_06690 PF01761 3-dehydroquinate synthase BGK55_06695 PF01202 Shikimate kinase BGK55_06700 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BGK55_06700 PF01243 Pyridoxamine 5'-phosphate oxidase BGK55_06710 PF04012 PspA/IM30 family BGK55_06735 PF03738 Glutathionylspermidine synthase preATP-grasp BGK55_06745 PF07690 Major Facilitator Superfamily BGK55_06750 PF09278 MerR, DNA binding BGK55_06750 PF00376 MerR family regulatory protein BGK55_06790 PF12706 Beta-lactamase superfamily domain BGK55_06815 PF00324 Amino acid permease BGK55_06820 PF00196 Bacterial regulatory proteins, luxR family BGK55_06830 PF00561 alpha/beta hydrolase fold BGK55_06840 PF00324 Amino acid permease BGK55_06850 PF01654 Cytochrome bd terminal oxidase subunit I BGK55_06855 PF02322 Cytochrome bd terminal oxidase subunit II BGK55_06865 PF00756 Putative esterase BGK55_06870 PF03448 MgtE intracellular N domain BGK55_06870 PF01769 Divalent cation transporter BGK55_06870 PF00571 CBS domain BGK55_06875 PF05524 PEP-utilising enzyme, N-terminal BGK55_06875 PF00391 PEP-utilising enzyme, mobile domain BGK55_06875 PF02896 PEP-utilising enzyme, TIM barrel domain BGK55_06880 PF00381 PTS HPr component phosphorylation site BGK55_06890 PF03668 P-loop ATPase protein family BGK55_06895 PF02603 HPr Serine kinase N terminus BGK55_06895 PF07475 HPr Serine kinase C-terminal domain BGK55_06900 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BGK55_06905 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BGK55_06910 PF00309 Sigma-54 factor, Activator interacting domain (AID) BGK55_06910 PF04552 Sigma-54, DNA binding domain BGK55_06910 PF04963 Sigma-54 factor, core binding domain BGK55_06915 PF00005 ABC transporter BGK55_06920 PF03968 OstA-like protein BGK55_06935 PF01380 SIS domain BGK55_06935 PF00571 CBS domain BGK55_06940 PF01722 BolA-like protein BGK55_06945 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BGK55_06965 PF00551 Formyl transferase BGK55_06980 PF02769 AIR synthase related protein, C-terminal domain BGK55_06980 PF00586 AIR synthase related protein, N-terminal domain BGK55_06990 PF01594 AI-2E family transporter BGK55_06995 PF00308 Bacterial dnaA protein BGK55_07000 PF00483 Nucleotidyl transferase BGK55_07005 PF01636 Phosphotransferase enzyme family BGK55_07035 PF00667 FAD binding domain BGK55_07035 PF00258 Flavodoxin BGK55_07035 PF00175 Oxidoreductase NAD-binding domain BGK55_07040 PF02424 ApbE family BGK55_07065 PF13640 2OG-Fe(II) oxygenase superfamily BGK55_07065 PF18331 PKHD-type hydroxylase C-terminal domain BGK55_07070 PF07715 TonB-dependent Receptor Plug Domain BGK55_07070 PF00593 TonB dependent receptor BGK55_07075 PF00355 Rieske [2Fe-2S] domain BGK55_07085 PF00266 Aminotransferase class-V BGK55_07090 PF01458 Uncharacterized protein family (UPF0051) BGK55_07095 PF00005 ABC transporter BGK55_07100 PF01458 Uncharacterized protein family (UPF0051) BGK55_07105 PF02082 Transcriptional regulator BGK55_07115 PF01965 DJ-1/PfpI family BGK55_07135 PF01551 Peptidase family M23 BGK55_07145 PF03807 NADP oxidoreductase coenzyme F420-dependent BGK55_07145 PF14748 Pyrroline-5-carboxylate reductase dimerisation BGK55_07150 PF01168 Alanine racemase, N-terminal domain BGK55_07155 PF00437 Type II/IV secretion system protein BGK55_07160 PF00437 Type II/IV secretion system protein BGK55_07185 PF02622 Uncharacterized ACR, COG1678 BGK55_07190 PF03652 Holliday junction resolvase BGK55_07195 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BGK55_07195 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BGK55_07200 PF02566 OsmC-like protein BGK55_07210 PF02567 Phenazine biosynthesis-like protein BGK55_07215 PF02567 Phenazine biosynthesis-like protein BGK55_07220 PF01842 ACT domain BGK55_07220 PF00696 Amino acid kinase family BGK55_07235 PF02875 Mur ligase family, glutamate ligase domain BGK55_07235 PF08245 Mur ligase middle domain BGK55_07250 PF00348 Polyprenyl synthetase BGK55_07255 PF00436 Single-strand binding protein family BGK55_07260 PF00990 Diguanylate cyclase, GGDEF domain BGK55_07260 PF00360 Phytochrome region BGK55_07260 PF00563 EAL domain BGK55_07260 PF01590 GAF domain BGK55_07265 PF00107 Zinc-binding dehydrogenase BGK55_07265 PF08240 Alcohol dehydrogenase GroES-like domain BGK55_07265 PF16197 Ketoacyl-synthetase C-terminal extension BGK55_07265 PF00109 Beta-ketoacyl synthase, N-terminal domain BGK55_07265 PF02801 Beta-ketoacyl synthase, C-terminal domain BGK55_07265 PF08659 KR domain BGK55_07265 PF00550 Phosphopantetheine attachment site BGK55_07265 PF14765 Polyketide synthase dehydratase BGK55_07265 PF00698 Acyl transferase domain BGK55_07270 PF01799 [2Fe-2S] binding domain BGK55_07270 PF10518 TAT (twin-arginine translocation) pathway signal sequence BGK55_07270 PF00111 2Fe-2S iron-sulfur cluster binding domain BGK55_07275 PF03450 CO dehydrogenase flavoprotein C-terminal domain BGK55_07275 PF00941 FAD binding domain in molybdopterin dehydrogenase BGK55_07280 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BGK55_07280 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BGK55_07285 PF13478 XdhC Rossmann domain BGK55_07285 PF02625 XdhC and CoxI family BGK55_07330 PF04328 Selenoprotein, putative BGK55_07335 PF02554 Carbon starvation protein CstA BGK55_07335 PF13722 5TM C-terminal transporter carbon starvation CstA BGK55_07340 PF02678 Pirin BGK55_07340 PF05726 Pirin C-terminal cupin domain BGK55_07355 PF02678 Pirin BGK55_07355 PF05726 Pirin C-terminal cupin domain BGK55_07365 PF04493 Endonuclease V BGK55_07370 PF00300 Histidine phosphatase superfamily (branch 1) BGK55_07385 PF13091 PLD-like domain BGK55_07390 PF00072 Response regulator receiver domain BGK55_07390 PF01339 CheB methylesterase BGK55_07395 PF01739 CheR methyltransferase, SAM binding domain BGK55_07395 PF03705 CheR methyltransferase, all-alpha domain BGK55_07400 PF13426 PAS domain BGK55_07400 PF00990 Diguanylate cyclase, GGDEF domain BGK55_07400 PF00563 EAL domain BGK55_07405 PF01584 CheW-like domain BGK55_07410 PF00672 HAMP domain BGK55_07410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGK55_07410 PF02203 Tar ligand binding domain homologue BGK55_07415 PF02895 Signal transducing histidine kinase, homodimeric domain BGK55_07415 PF09078 CheY binding BGK55_07415 PF01584 CheW-like domain BGK55_07415 PF01627 Hpt domain BGK55_07415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_07440 PF01527 Transposase BGK55_07445 PF13276 HTH-like domain BGK55_07445 PF13683 Integrase core domain BGK55_07455 PF03461 TRCF domain BGK55_07455 PF02559 CarD-like/TRCF domain BGK55_07455 PF17757 UvrB interaction domain BGK55_07455 PF00271 Helicase conserved C-terminal domain BGK55_07455 PF00270 DEAD/DEAH box helicase BGK55_07465 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ BGK55_07470 PF00072 Response regulator receiver domain BGK55_07470 PF00486 Transcriptional regulatory protein, C terminal BGK55_07475 PF00512 His Kinase A (phospho-acceptor) domain BGK55_07475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_07475 PF00672 HAMP domain BGK55_07485 PF06123 Inner membrane protein CreD BGK55_07510 PF00749 tRNA synthetases class I (E and Q), catalytic domain BGK55_07515 PF01475 Ferric uptake regulator family BGK55_07525 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BGK55_07525 PF00529 HlyD membrane-fusion protein of T1SS BGK55_07530 PF00873 AcrB/AcrD/AcrF family BGK55_07535 PF02321 Outer membrane efflux protein BGK55_07540 PF16859 Tetracyclin repressor-like, C-terminal domain BGK55_07540 PF00440 Bacterial regulatory proteins, tetR family BGK55_07545 PF00248 Aldo/keto reductase family BGK55_07550 PF03466 LysR substrate binding domain BGK55_07550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGK55_07560 PF06719 AraC-type transcriptional regulator N-terminus BGK55_07560 PF12833 Helix-turn-helix domain BGK55_07570 PF03466 LysR substrate binding domain BGK55_07570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGK55_07575 PF07690 Major Facilitator Superfamily BGK55_07590 PF01483 Proprotein convertase P-domain BGK55_07590 PF00082 Subtilase family BGK55_07600 PF01483 Proprotein convertase P-domain BGK55_07600 PF00082 Subtilase family BGK55_07610 PF07715 TonB-dependent Receptor Plug Domain BGK55_07610 PF00593 TonB dependent receptor BGK55_07635 PF00654 Voltage gated chloride channel BGK55_07645 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BGK55_07645 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BGK55_07650 PF00730 HhH-GPD superfamily base excision DNA repair protein BGK55_07650 PF06029 AlkA N-terminal domain BGK55_07695 PF00270 DEAD/DEAH box helicase BGK55_07695 PF03880 DbpA RNA binding domain BGK55_07695 PF00271 Helicase conserved C-terminal domain BGK55_07700 PF00563 EAL domain BGK55_07700 PF00990 Diguanylate cyclase, GGDEF domain BGK55_07700 PF08448 PAS fold BGK55_07705 PF00849 RNA pseudouridylate synthase BGK55_07705 PF01479 S4 domain BGK55_07710 PF00072 Response regulator receiver domain BGK55_07710 PF00990 Diguanylate cyclase, GGDEF domain BGK55_07730 PF03737 Aldolase/RraA BGK55_07740 PF00999 Sodium/hydrogen exchanger family BGK55_07750 PF00072 Response regulator receiver domain BGK55_07750 PF00486 Transcriptional regulatory protein, C terminal BGK55_07755 PF02321 Outer membrane efflux protein BGK55_07770 PF00873 AcrB/AcrD/AcrF family BGK55_07785 PF00664 ABC transporter transmembrane region BGK55_07785 PF00005 ABC transporter BGK55_07815 PF03466 LysR substrate binding domain BGK55_07815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGK55_07825 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BGK55_07830 PF04070 Domain of unknown function (DUF378) BGK55_07855 PF00085 Thioredoxin BGK55_07865 PF08264 Anticodon-binding domain of tRNA BGK55_07865 PF13603 Leucyl-tRNA synthetase, Domain 2 BGK55_07865 PF00133 tRNA synthetases class I (I, L, M and V) BGK55_07895 PF02590 Predicted SPOUT methyltransferase BGK55_07910 PF04402 Protein of unknown function (DUF541) BGK55_07915 PF02545 Maf-like protein BGK55_07920 PF10150 Ribonuclease E/G family BGK55_07920 PF00575 S1 RNA binding domain BGK55_07925 PF13502 AsmA-like C-terminal region BGK55_07925 PF13116 Protein of unknown function BGK55_07935 PF01523 Putative modulator of DNA gyrase BGK55_07940 PF04751 Protein of unknown function (DUF615) BGK55_07945 PF01523 Putative modulator of DNA gyrase BGK55_07955 PF14521 Lysine-specific metallo-endopeptidase BGK55_07960 PF00348 Polyprenyl synthetase BGK55_07965 PF02609 Exonuclease VII small subunit BGK55_07970 PF11734 TilS substrate C-terminal domain BGK55_07970 PF01171 PP-loop family BGK55_07970 PF09179 TilS substrate binding domain BGK55_07975 PF00245 Alkaline phosphatase BGK55_07980 PF00375 Sodium:dicarboxylate symporter family BGK55_07995 PF00877 NlpC/P60 family BGK55_08000 PF00877 NlpC/P60 family BGK55_08005 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BGK55_08010 PF04235 Protein of unknown function (DUF418) BGK55_08015 PF01266 FAD dependent oxidoreductase BGK55_08020 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BGK55_08020 PF07992 Pyridine nucleotide-disulphide oxidoreductase BGK55_08025 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BGK55_08040 PF05649 Peptidase family M13 BGK55_08040 PF01431 Peptidase family M13 BGK55_08045 PF05649 Peptidase family M13 BGK55_08045 PF01431 Peptidase family M13 BGK55_08065 PF10609 NUBPL iron-transfer P-loop NTPase BGK55_08070 PF00692 dUTPase BGK55_08090 PF01738 Dienelactone hydrolase family BGK55_08120 PF03449 Transcription elongation factor, N-terminal BGK55_08120 PF01272 Transcription elongation factor, GreA/GreB, C-term BGK55_08135 PF00293 NUDIX domain BGK55_08140 PF05872 Bacterial protein of unknown function (DUF853) BGK55_08150 PF02666 Phosphatidylserine decarboxylase BGK55_08155 PF02630 SCO1/SenC BGK55_08160 PF05175 Methyltransferase small domain BGK55_08165 PF01264 Chorismate synthase BGK55_08170 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BGK55_08170 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BGK55_08175 PF01118 Semialdehyde dehydrogenase, NAD binding domain BGK55_08175 PF02774 Semialdehyde dehydrogenase, dimerisation domain BGK55_08200 PF01416 tRNA pseudouridine synthase BGK55_08205 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BGK55_08210 PF03466 LysR substrate binding domain BGK55_08210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGK55_08215 PF00291 Pyridoxal-phosphate dependent enzyme BGK55_08225 PF00290 Tryptophan synthase alpha chain BGK55_08230 PF01039 Carboxyl transferase domain BGK55_08230 PF17848 Acetyl-coA carboxylase zinc finger domain BGK55_08235 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BGK55_08235 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BGK55_08235 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BGK55_08235 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BGK55_08255 PF03707 Bacterial signalling protein N terminal repeat BGK55_08255 PF00563 EAL domain BGK55_08255 PF00990 Diguanylate cyclase, GGDEF domain BGK55_08270 PF00106 short chain dehydrogenase BGK55_08275 PF00121 Triosephosphate isomerase BGK55_08290 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BGK55_08295 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BGK55_08300 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BGK55_08305 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BGK55_08315 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BGK55_08315 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BGK55_08315 PF10531 SLBB domain BGK55_08320 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BGK55_08320 PF00384 Molybdopterin oxidoreductase BGK55_08320 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal BGK55_08325 PF00146 NADH dehydrogenase BGK55_08330 PF12838 4Fe-4S dicluster domain BGK55_08335 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BGK55_08340 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BGK55_08345 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BGK55_08345 PF00361 Proton-conducting membrane transporter BGK55_08350 PF00361 Proton-conducting membrane transporter BGK55_08350 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus BGK55_08355 PF00361 Proton-conducting membrane transporter BGK55_08365 PF02576 RimP N-terminal domain BGK55_08365 PF17384 RimP C-terminal SH3 domain BGK55_08370 PF00575 S1 RNA binding domain BGK55_08370 PF13184 NusA-like KH domain BGK55_08370 PF08529 NusA N-terminal domain BGK55_08375 PF00009 Elongation factor Tu GTP binding domain BGK55_08375 PF04760 Translation initiation factor IF-2, N-terminal region BGK55_08375 PF08364 Bacterial translation initiation factor IF-2 associated region BGK55_08375 PF11987 Translation-initiation factor 2 BGK55_08380 PF02033 Ribosome-binding factor A BGK55_08385 PF09157 Pseudouridine synthase II TruB, C-terminal BGK55_08385 PF16198 tRNA pseudouridylate synthase B C-terminal domain BGK55_08385 PF01509 TruB family pseudouridylate synthase (N terminal domain) BGK55_08390 PF00312 Ribosomal protein S15 BGK55_08405 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BGK55_08405 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BGK55_08415 PF00731 AIR carboxylase BGK55_08420 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BGK55_08420 PF02222 ATP-grasp domain BGK55_08425 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BGK55_08425 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BGK55_08430 PF00462 Glutaredoxin BGK55_08440 PF01914 MarC family integral membrane protein BGK55_08445 PF00593 TonB dependent receptor BGK55_08450 PF11892 Domain of unknown function (DUF3412) BGK55_08450 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases BGK55_08450 PF03641 Possible lysine decarboxylase BGK55_08470 PF05567 Neisseria PilC beta-propeller domain BGK55_08490 PF00271 Helicase conserved C-terminal domain BGK55_08490 PF04851 Type III restriction enzyme, res subunit BGK55_08490 PF02151 UvrB/uvrC motif BGK55_08490 PF12344 Ultra-violet resistance protein B BGK55_08490 PF17757 UvrB interaction domain BGK55_08505 PF02534 Type IV secretory system Conjugative DNA transfer BGK55_08525 PF03743 Bacterial conjugation TrbI-like protein BGK55_08530 PF00437 Type II/IV secretion system protein BGK55_08535 PF01464 Transglycosylase SLT domain BGK55_08545 PF05101 Type IV secretory pathway, VirB3-like protein BGK55_08550 PF03135 CagE, TrbE, VirB family, component of type IV transporter system BGK55_08590 PF00128 Alpha amylase, catalytic domain BGK55_08600 PF14508 Glycosyl-hydrolase 97 N-terminal BGK55_08600 PF10566 Glycoside hydrolase 97 BGK55_08600 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation BGK55_08610 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BGK55_08615 PF00686 Starch binding domain BGK55_08615 PF00128 Alpha amylase, catalytic domain BGK55_08620 PF00356 Bacterial regulatory proteins, lacI family BGK55_08625 PF03129 Anticodon binding domain BGK55_08625 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BGK55_08625 PF02824 TGS domain BGK55_08625 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BGK55_08630 PF00707 Translation initiation factor IF-3, C-terminal domain BGK55_08630 PF05198 Translation initiation factor IF-3, N-terminal domain BGK55_08635 PF01632 Ribosomal protein L35 BGK55_08640 PF00453 Ribosomal protein L20 BGK55_08645 PF01409 tRNA synthetases class II core domain (F) BGK55_08645 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BGK55_08650 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BGK55_08650 PF01588 Putative tRNA binding domain BGK55_08650 PF03147 Ferredoxin-fold anticodon binding domain BGK55_08650 PF03484 tRNA synthetase B5 domain BGK55_08650 PF03483 B3/4 domain BGK55_08655 PF00216 Bacterial DNA-binding protein BGK55_08660 PF13411 MerR HTH family regulatory protein BGK55_08680 PF02397 Bacterial sugar transferase BGK55_08700 PF00534 Glycosyl transferases group 1 BGK55_08700 PF13439 Glycosyltransferase Family 4 BGK55_08710 PF14667 Polysaccharide biosynthesis C-terminal domain BGK55_08725 PF03808 Glycosyl transferase WecB/TagA/CpsF family BGK55_08740 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BGK55_08740 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BGK55_08745 PF16123 Hydroxyacylglutathione hydrolase C-terminus BGK55_08745 PF00753 Metallo-beta-lactamase superfamily BGK55_08750 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family BGK55_08770 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BGK55_08770 PF02779 Transketolase, pyrimidine binding domain BGK55_08770 PF02780 Transketolase, C-terminal domain BGK55_08780 PF02770 Acyl-CoA dehydrogenase, middle domain BGK55_08780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BGK55_08780 PF12806 Acetyl-CoA dehydrogenase C-terminal like BGK55_08780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BGK55_08795 PF08212 Lipocalin-like domain BGK55_08825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_08825 PF00072 Response regulator receiver domain BGK55_08825 PF13426 PAS domain BGK55_08830 PF04362 Bacterial Fe(2+) trafficking BGK55_08835 PF00633 Helix-hairpin-helix motif BGK55_08835 PF00730 HhH-GPD superfamily base excision DNA repair protein BGK55_08835 PF10576 Iron-sulfur binding domain of endonuclease III BGK55_08835 PF14815 NUDIX domain BGK55_08840 PF02881 SRP54-type protein, helical bundle domain BGK55_08840 PF00448 SRP54-type protein, GTPase domain BGK55_08850 PF05544 Proline racemase BGK55_08855 PF01266 FAD dependent oxidoreductase BGK55_08865 PF07992 Pyridine nucleotide-disulphide oxidoreductase BGK55_08865 PF04324 BFD-like [2Fe-2S] binding domain BGK55_08870 PF00701 Dihydrodipicolinate synthetase family BGK55_08875 PF00171 Aldehyde dehydrogenase family BGK55_08880 PF01321 Creatinase/Prolidase N-terminal domain BGK55_08880 PF00557 Metallopeptidase family M24 BGK55_08895 PF13520 Amino acid permease BGK55_08930 PF00593 TonB dependent receptor BGK55_08930 PF07715 TonB-dependent Receptor Plug Domain BGK55_08935 PF07532 Bacterial Ig-like domain (group 4) BGK55_08940 PF04616 Glycosyl hydrolases family 43 BGK55_08950 PF00593 TonB dependent receptor BGK55_08950 PF07715 TonB-dependent Receptor Plug Domain BGK55_08985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_08985 PF00183 Hsp90 protein BGK55_08995 PF01467 Cytidylyltransferase-like BGK55_09005 PF00037 4Fe-4S binding domain BGK55_09020 PF02927 Cellulase N-terminal ig-like domain BGK55_09020 PF00759 Glycosyl hydrolase family 9 BGK55_09060 PF02547 Queuosine biosynthesis protein BGK55_09065 PF01702 Queuine tRNA-ribosyltransferase BGK55_09070 PF02699 Preprotein translocase subunit BGK55_09075 PF02355 Protein export membrane protein BGK55_09075 PF13721 SecD export protein N-terminal TM region BGK55_09075 PF07549 SecD/SecF GG Motif BGK55_09080 PF07549 SecD/SecF GG Motif BGK55_09080 PF02355 Protein export membrane protein BGK55_09085 PF13683 Integrase core domain BGK55_09085 PF13276 HTH-like domain BGK55_09090 PF01527 Transposase BGK55_09110 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BGK55_09115 PF00294 pfkB family carbohydrate kinase BGK55_09120 PF00381 PTS HPr component phosphorylation site BGK55_09120 PF02896 PEP-utilising enzyme, TIM barrel domain BGK55_09120 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BGK55_09120 PF00391 PEP-utilising enzyme, mobile domain BGK55_09120 PF05524 PEP-utilising enzyme, N-terminal BGK55_09125 PF00356 Bacterial regulatory proteins, lacI family BGK55_09130 PF00873 AcrB/AcrD/AcrF family BGK55_09135 PF00529 HlyD membrane-fusion protein of T1SS BGK55_09135 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BGK55_09145 PF05088 Bacterial NAD-glutamate dehydrogenase BGK55_09165 PF00072 Response regulator receiver domain BGK55_09170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_09170 PF00672 HAMP domain BGK55_09170 PF00072 Response regulator receiver domain BGK55_09170 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BGK55_09170 PF00512 His Kinase A (phospho-acceptor) domain BGK55_09170 PF01627 Hpt domain BGK55_09175 PF04286 Protein of unknown function (DUF445) BGK55_09185 PF00202 Aminotransferase class-III BGK55_09195 PF07690 Major Facilitator Superfamily BGK55_09200 PF02634 FdhD/NarQ family BGK55_09205 PF00384 Molybdopterin oxidoreductase BGK55_09215 PF07690 Major Facilitator Superfamily BGK55_09215 PF00083 Sugar (and other) transporter BGK55_09220 PF01814 Hemerythrin HHE cation binding domain BGK55_09225 PF00072 Response regulator receiver domain BGK55_09225 PF00990 Diguanylate cyclase, GGDEF domain BGK55_09235 PF00120 Glutamine synthetase, catalytic domain BGK55_09240 PF07722 Peptidase C26 BGK55_09245 PF00120 Glutamine synthetase, catalytic domain BGK55_09250 PF00202 Aminotransferase class-III BGK55_09255 PF13416 Bacterial extracellular solute-binding protein BGK55_09260 PF13533 Biotin-lipoyl like BGK55_09265 PF07690 Major Facilitator Superfamily BGK55_09270 PF02321 Outer membrane efflux protein BGK55_09275 PF08402 TOBE domain BGK55_09275 PF00005 ABC transporter BGK55_09280 PF00528 Binding-protein-dependent transport system inner membrane component BGK55_09285 PF00528 Binding-protein-dependent transport system inner membrane component BGK55_09295 PF00171 Aldehyde dehydrogenase family BGK55_09310 PF03471 Transporter associated domain BGK55_09310 PF00571 CBS domain BGK55_09320 PF02130 Uncharacterized protein family UPF0054 BGK55_09330 PF02562 PhoH-like protein BGK55_09335 PF00919 Uncharacterized protein family UPF0004 BGK55_09335 PF04055 Radical SAM superfamily BGK55_09335 PF01938 TRAM domain BGK55_09350 PF01464 Transglycosylase SLT domain BGK55_09355 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal BGK55_09355 PF00355 Rieske [2Fe-2S] domain BGK55_09360 PF00033 Cytochrome b/b6/petB BGK55_09360 PF00032 Cytochrome b(C-terminal)/b6/petD BGK55_09365 PF02167 Cytochrome C1 family BGK55_09370 PF00043 Glutathione S-transferase, C-terminal domain BGK55_09370 PF02798 Glutathione S-transferase, N-terminal domain BGK55_09375 PF04386 Stringent starvation protein B BGK55_09395 PF00271 Helicase conserved C-terminal domain BGK55_09395 PF00270 DEAD/DEAH box helicase BGK55_09395 PF08494 DEAD/H associated BGK55_09400 PF02245 Methylpurine-DNA glycosylase (MPG) BGK55_09405 PF00672 HAMP domain BGK55_09405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGK55_09405 PF02743 Cache domain BGK55_09455 PF13298 DNA polymerase Ligase (LigD) BGK55_09455 PF04679 ATP dependent DNA ligase C terminal region BGK55_09455 PF01068 ATP dependent DNA ligase domain BGK55_09460 PF00570 HRDC domain BGK55_09460 PF01612 3'-5' exonuclease BGK55_09470 PF03781 Sulfatase-modifying factor enzyme 1 BGK55_09480 PF13742 OB-fold nucleic acid binding domain BGK55_09480 PF02601 Exonuclease VII, large subunit BGK55_09485 PF08331 Domain of unknown function (DUF1730) BGK55_09490 PF03853 YjeF-related protein N-terminus BGK55_09490 PF01256 Carbohydrate kinase BGK55_09495 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BGK55_09500 PF11741 AMIN domain BGK55_09500 PF01520 N-acetylmuramoyl-L-alanine amidase BGK55_09505 PF01119 DNA mismatch repair protein, C-terminal domain BGK55_09505 PF08676 MutL C terminal dimerisation domain BGK55_09525 PF05233 PHB accumulation regulatory domain BGK55_09525 PF07879 PHB/PHA accumulation regulator DNA-binding domain BGK55_09530 PF00106 short chain dehydrogenase BGK55_09535 PF00749 tRNA synthetases class I (E and Q), catalytic domain BGK55_09540 PF01435 Peptidase family M48 BGK55_09545 PF00563 EAL domain BGK55_09545 PF00072 Response regulator receiver domain BGK55_09545 PF00990 Diguanylate cyclase, GGDEF domain BGK55_09555 PF07152 YaeQ protein BGK55_09560 PF00313 'Cold-shock' DNA-binding domain BGK55_09565 PF02798 Glutathione S-transferase, N-terminal domain BGK55_09565 PF14497 Glutathione S-transferase, C-terminal domain BGK55_09570 PF00135 Carboxylesterase family BGK55_09575 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BGK55_09580 PF00156 Phosphoribosyl transferase domain BGK55_09585 PF00270 DEAD/DEAH box helicase BGK55_09585 PF00271 Helicase conserved C-terminal domain BGK55_09585 PF03880 DbpA RNA binding domain BGK55_09600 PF00545 ribonuclease BGK55_09605 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BGK55_09605 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BGK55_09610 PF00459 Inositol monophosphatase family BGK55_09615 PF00588 SpoU rRNA Methylase family BGK55_09625 PF00563 EAL domain BGK55_09625 PF03707 Bacterial signalling protein N terminal repeat BGK55_09625 PF13188 PAS domain BGK55_09625 PF00990 Diguanylate cyclase, GGDEF domain BGK55_09630 PF04055 Radical SAM superfamily BGK55_09635 PF01132 Elongation factor P (EF-P) OB domain BGK55_09635 PF09285 Elongation factor P, C-terminal BGK55_09635 PF08207 Elongation factor P (EF-P) KOW-like domain BGK55_09645 PF01979 Amidohydrolase family BGK55_09655 PF13419 Haloacid dehalogenase-like hydrolase BGK55_09665 PF00295 Glycosyl hydrolases family 28 BGK55_09670 PF13683 Integrase core domain BGK55_09670 PF13276 HTH-like domain BGK55_09700 PF00753 Metallo-beta-lactamase superfamily BGK55_09710 PF05985 Ethanolamine ammonia-lyase light chain (EutC) BGK55_09715 PF06751 Ethanolamine ammonia lyase large subunit (EutB) BGK55_09730 PF01551 Peptidase family M23 BGK55_09730 PF08460 Bacterial SH3 domain BGK55_09735 PF01979 Amidohydrolase family BGK55_09740 PF01809 Putative membrane protein insertion efficiency factor BGK55_09755 PF02657 Fe-S metabolism associated domain BGK55_09760 PF01406 tRNA synthetases class I (C) catalytic domain BGK55_09760 PF09190 DALR domain BGK55_09770 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BGK55_09770 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BGK55_09775 PF00764 Arginosuccinate synthase BGK55_09790 PF00696 Amino acid kinase family BGK55_09790 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase BGK55_09800 PF01118 Semialdehyde dehydrogenase, NAD binding domain BGK55_09805 PF00206 Lyase BGK55_09815 PF01472 PUA domain BGK55_09815 PF00696 Amino acid kinase family BGK55_09820 PF00171 Aldehyde dehydrogenase family BGK55_09825 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BGK55_09825 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BGK55_09840 PF02322 Cytochrome bd terminal oxidase subunit II BGK55_09845 PF01654 Cytochrome bd terminal oxidase subunit I BGK55_09850 PF00005 ABC transporter BGK55_09850 PF00664 ABC transporter transmembrane region BGK55_09855 PF00005 ABC transporter BGK55_09855 PF00664 ABC transporter transmembrane region BGK55_09860 PF00313 'Cold-shock' DNA-binding domain BGK55_09865 PF00561 alpha/beta hydrolase fold BGK55_09875 PF03918 Cytochrome C biogenesis protein BGK55_09880 PF08534 Redoxin BGK55_09885 PF01578 Cytochrome C assembly protein BGK55_09885 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BGK55_09890 PF03100 CcmE BGK55_09900 PF01578 Cytochrome C assembly protein BGK55_09905 PF03379 CcmB protein BGK55_09910 PF00005 ABC transporter BGK55_09915 PF00155 Aminotransferase class I and II BGK55_09920 PF00795 Carbon-nitrogen hydrolase BGK55_09935 PF01479 S4 domain BGK55_09935 PF00849 RNA pseudouridylate synthase BGK55_09940 PF04079 Segregation and condensation complex subunit ScpB BGK55_09945 PF02616 Segregation and condensation protein ScpA BGK55_09950 PF03795 YCII-related domain BGK55_09960 PF00356 Bacterial regulatory proteins, lacI family BGK55_09980 PF00528 Binding-protein-dependent transport system inner membrane component BGK55_09985 PF00528 Binding-protein-dependent transport system inner membrane component BGK55_10010 PF00795 Carbon-nitrogen hydrolase BGK55_10015 PF04371 Porphyromonas-type peptidyl-arginine deiminase BGK55_10025 PF00444 Ribosomal protein L36 BGK55_10030 PF02224 Cytidylate kinase BGK55_10035 PF00575 S1 RNA binding domain BGK55_10040 PF00216 Bacterial DNA-binding protein BGK55_10050 PF18073 Rubredoxin metal binding domain BGK55_10055 PF00953 Glycosyl transferase family 4 BGK55_10060 PF02719 Polysaccharide biosynthesis protein BGK55_10065 PF00483 Nucleotidyl transferase BGK55_10070 PF02254 TrkA-N domain BGK55_10070 PF00999 Sodium/hydrogen exchanger family BGK55_10080 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BGK55_10080 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BGK55_10085 PF00478 IMP dehydrogenase / GMP reductase domain BGK55_10085 PF00571 CBS domain BGK55_10090 PF00117 Glutamine amidotransferase class-I BGK55_10090 PF02540 NAD synthase BGK55_10090 PF00958 GMP synthase C terminal domain BGK55_10095 PF00589 Phage integrase family BGK55_10095 PF13356 Arm DNA-binding domain BGK55_10115 PF13276 HTH-like domain BGK55_10115 PF00665 Integrase core domain BGK55_10115 PF13333 Integrase core domain BGK55_10130 PF00248 Aldo/keto reductase family BGK55_10140 PF08240 Alcohol dehydrogenase GroES-like domain BGK55_10140 PF00107 Zinc-binding dehydrogenase BGK55_10165 PF12706 Beta-lactamase superfamily domain BGK55_10175 PF00873 AcrB/AcrD/AcrF family BGK55_10180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BGK55_10185 PF02321 Outer membrane efflux protein BGK55_10190 PF17754 MftR C-terminal domain BGK55_10190 PF00440 Bacterial regulatory proteins, tetR family BGK55_10200 PF13276 HTH-like domain BGK55_10200 PF00665 Integrase core domain BGK55_10200 PF13333 Integrase core domain BGK55_10210 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) BGK55_10215 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus BGK55_10215 PF00361 Proton-conducting membrane transporter BGK55_10215 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BGK55_10220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGK55_10220 PF03466 LysR substrate binding domain BGK55_10245 PF00072 Response regulator receiver domain BGK55_10245 PF00196 Bacterial regulatory proteins, luxR family BGK55_10260 PF00857 Isochorismatase family BGK55_10270 PF07969 Amidohydrolase family BGK55_10290 PF00561 alpha/beta hydrolase fold BGK55_10295 PF01566 Natural resistance-associated macrophage protein BGK55_10300 PF02742 Iron dependent repressor, metal binding and dimerisation domain BGK55_10300 PF01325 Iron dependent repressor, N-terminal DNA binding domain BGK55_10305 PF14437 MafB19-like deaminase BGK55_10310 PF00929 Exonuclease BGK55_10315 PF05552 Conserved TM helix BGK55_10315 PF00924 Mechanosensitive ion channel BGK55_10320 PF00391 PEP-utilising enzyme, mobile domain BGK55_10320 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BGK55_10320 PF02896 PEP-utilising enzyme, TIM barrel domain BGK55_10325 PF03618 Kinase/pyrophosphorylase BGK55_10345 PF01066 CDP-alcohol phosphatidyltransferase BGK55_10355 PF00561 alpha/beta hydrolase fold BGK55_10370 PF00355 Rieske [2Fe-2S] domain BGK55_10370 PF01266 FAD dependent oxidoreductase BGK55_10380 PF17674 HHH domain BGK55_10380 PF16921 Tex protein YqgF-like domain BGK55_10380 PF09371 Tex-like protein N-terminal domain BGK55_10380 PF00575 S1 RNA binding domain BGK55_10385 PF00072 Response regulator receiver domain BGK55_10385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_10385 PF00512 His Kinase A (phospho-acceptor) domain BGK55_10385 PF09308 LuxQ, periplasmic BGK55_10425 PF00034 Cytochrome c BGK55_10435 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BGK55_10440 PF00873 AcrB/AcrD/AcrF family BGK55_10460 PF13333 Integrase core domain BGK55_10460 PF13276 HTH-like domain BGK55_10460 PF00665 Integrase core domain BGK55_10470 PF01527 Transposase BGK55_10475 PF00873 AcrB/AcrD/AcrF family BGK55_10480 PF01081 KDPG and KHG aldolase BGK55_10485 PF00920 Dehydratase family BGK55_10490 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BGK55_10495 PF02685 Glucokinase BGK55_10500 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BGK55_10500 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BGK55_10505 PF17912 MalK OB fold domain BGK55_10505 PF00005 ABC transporter BGK55_10515 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BGK55_10520 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BGK55_10525 PF02910 Fumarate reductase flavoprotein C-term BGK55_10525 PF00890 FAD binding domain BGK55_10535 PF13085 2Fe-2S iron-sulfur cluster binding domain BGK55_10540 PF03937 Flavinator of succinate dehydrogenase BGK55_10550 PF12704 MacB-like periplasmic core domain BGK55_10550 PF02687 FtsX-like permease family BGK55_10555 PF00005 ABC transporter BGK55_10565 PF00753 Metallo-beta-lactamase superfamily BGK55_10565 PF03772 Competence protein BGK55_10570 PF01618 MotA/TolQ/ExbB proton channel family BGK55_10580 PF00005 ABC transporter BGK55_10580 PF00664 ABC transporter transmembrane region BGK55_10585 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BGK55_10590 PF02348 Cytidylyltransferase BGK55_10595 PF01451 Low molecular weight phosphotyrosine protein phosphatase BGK55_10605 PF02151 UvrB/uvrC motif BGK55_10605 PF01541 GIY-YIG catalytic domain BGK55_10605 PF08459 UvrC Helix-hairpin-helix N-terminal BGK55_10610 PF01066 CDP-alcohol phosphatidyltransferase BGK55_10645 PF07194 P2 response regulator binding domain BGK55_10645 PF02895 Signal transducing histidine kinase, homodimeric domain BGK55_10645 PF01584 CheW-like domain BGK55_10645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_10645 PF01627 Hpt domain BGK55_10650 PF04344 Chemotaxis phosphatase, CheZ BGK55_10655 PF00072 Response regulator receiver domain BGK55_10660 PF04545 Sigma-70, region 4 BGK55_10660 PF04539 Sigma-70 region 3 BGK55_10660 PF04542 Sigma-70 region 2 BGK55_10665 PF10609 NUBPL iron-transfer P-loop NTPase BGK55_10670 PF00448 SRP54-type protein, GTPase domain BGK55_10675 PF00771 FHIPEP family BGK55_10680 PF01312 FlhB HrpN YscU SpaS Family BGK55_10685 PF00563 EAL domain BGK55_10685 PF00990 Diguanylate cyclase, GGDEF domain BGK55_10685 PF03707 Bacterial signalling protein N terminal repeat BGK55_10690 PF13188 PAS domain BGK55_10690 PF03707 Bacterial signalling protein N terminal repeat BGK55_10690 PF00990 Diguanylate cyclase, GGDEF domain BGK55_10690 PF00563 EAL domain BGK55_10705 PF03695 Uncharacterised protein family (UPF0149) BGK55_10705 PF02810 SEC-C motif BGK55_10710 PF13700 Domain of unknown function (DUF4158) BGK55_10710 PF01526 Tn3 transposase DDE domain BGK55_10725 PF02796 Helix-turn-helix domain of resolvase BGK55_10725 PF00239 Resolvase, N terminal domain BGK55_10735 PF01311 Bacterial export proteins, family 1 BGK55_10740 PF01313 Bacterial export proteins, family 3 BGK55_10745 PF00813 FliP family BGK55_10750 PF04347 Flagellar biosynthesis protein, FliO BGK55_10755 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BGK55_10760 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BGK55_10760 PF02154 Flagellar motor switch protein FliM BGK55_10780 PF18269 T3SS EscN ATPase C-terminal domain BGK55_10780 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BGK55_10790 PF01706 FliG C-terminal domain BGK55_10790 PF14841 FliG middle domain BGK55_10790 PF14842 FliG N-terminal domain BGK55_10795 PF08345 Flagellar M-ring protein C-terminal BGK55_10795 PF01514 Secretory protein of YscJ/FliF family BGK55_10800 PF02049 Flagellar hook-basal body complex protein FliE BGK55_10815 PF00534 Glycosyl transferases group 1 BGK55_10815 PF00535 Glycosyl transferase family 2 BGK55_10820 PF04230 Polysaccharide pyruvyl transferase BGK55_10855 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BGK55_10855 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BGK55_10865 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BGK55_10870 PF02954 Bacterial regulatory protein, Fis family BGK55_10870 PF00072 Response regulator receiver domain BGK55_10870 PF00158 Sigma-54 interaction domain BGK55_10875 PF00072 Response regulator receiver domain BGK55_10875 PF01339 CheB methylesterase BGK55_10880 PF04552 Sigma-54, DNA binding domain BGK55_10880 PF00309 Sigma-54 factor, Activator interacting domain (AID) BGK55_10880 PF04963 Sigma-54 factor, core binding domain BGK55_10885 PF00196 Bacterial regulatory proteins, luxR family BGK55_10885 PF00072 Response regulator receiver domain BGK55_10900 PF02561 Flagellar protein FliS BGK55_10905 PF07195 Flagellar hook-associated protein 2 C-terminus BGK55_10905 PF07196 Flagellin hook IN motif BGK55_10905 PF02465 Flagellar hook-associated protein 2 N-terminus BGK55_10910 PF00669 Bacterial flagellin N-terminal helical region BGK55_10910 PF00700 Bacterial flagellin C-terminal helical region BGK55_10915 PF00669 Bacterial flagellin N-terminal helical region BGK55_10915 PF00700 Bacterial flagellin C-terminal helical region BGK55_10920 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BGK55_10920 PF07196 Flagellin hook IN motif BGK55_10925 PF10135 Rod binding protein BGK55_10925 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BGK55_10930 PF02119 Flagellar P-ring protein BGK55_10935 PF02107 Flagellar L-ring protein BGK55_10940 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BGK55_10940 PF00460 Flagella basal body rod protein BGK55_10945 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BGK55_10945 PF00460 Flagella basal body rod protein BGK55_10950 PF07559 Flagellar basal body protein FlaE BGK55_10950 PF00460 Flagella basal body rod protein BGK55_10950 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BGK55_10955 PF03963 Flagellar hook capping protein - N-terminal region BGK55_10960 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BGK55_10960 PF00460 Flagella basal body rod protein BGK55_10965 PF00460 Flagella basal body rod protein BGK55_10970 PF00072 Response regulator receiver domain BGK55_10970 PF01584 CheW-like domain BGK55_10990 PF13426 PAS domain BGK55_10990 PF00989 PAS fold BGK55_10990 PF00512 His Kinase A (phospho-acceptor) domain BGK55_10990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_10990 PF13188 PAS domain BGK55_10995 PF03707 Bacterial signalling protein N terminal repeat BGK55_10995 PF00563 EAL domain BGK55_10995 PF00990 Diguanylate cyclase, GGDEF domain BGK55_11000 PF07730 Histidine kinase BGK55_11000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_11005 PF00990 Diguanylate cyclase, GGDEF domain BGK55_11005 PF03707 Bacterial signalling protein N terminal repeat BGK55_11005 PF00563 EAL domain BGK55_11015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGK55_11015 PF12729 Four helix bundle sensory module for signal transduction BGK55_11015 PF00672 HAMP domain BGK55_11020 PF04356 Protein of unknown function (DUF489) BGK55_11030 PF00293 NUDIX domain BGK55_11035 PF02617 ATP-dependent Clp protease adaptor protein ClpS BGK55_11040 PF17871 AAA lid domain BGK55_11040 PF10431 C-terminal, D2-small domain, of ClpB protein BGK55_11040 PF00004 ATPase family associated with various cellular activities (AAA) BGK55_11040 PF07724 AAA domain (Cdc48 subfamily) BGK55_11040 PF02861 Clp amino terminal domain, pathogenicity island component BGK55_11045 PF01176 Translation initiation factor 1A / IF-1 BGK55_11050 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BGK55_11060 PF07992 Pyridine nucleotide-disulphide oxidoreductase BGK55_11075 PF03548 Outer membrane lipoprotein carrier protein LolA BGK55_11085 PF12002 MgsA AAA+ ATPase C terminal BGK55_11085 PF00004 ATPase family associated with various cellular activities (AAA) BGK55_11085 PF16193 AAA C-terminal domain BGK55_11090 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BGK55_11095 PF02803 Thiolase, C-terminal domain BGK55_11095 PF00108 Thiolase, N-terminal domain BGK55_11100 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BGK55_11100 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BGK55_11100 PF00378 Enoyl-CoA hydratase/isomerase BGK55_11110 PF00334 Nucleoside diphosphate kinase BGK55_11115 PF04055 Radical SAM superfamily BGK55_11125 PF13464 Domain of unknown function (DUF4115) BGK55_11135 PF13360 PQQ-like domain BGK55_11135 PF01011 PQQ enzyme repeat BGK55_11140 PF01926 50S ribosome-binding GTPase BGK55_11140 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BGK55_11145 PF00994 Probable molybdopterin binding domain BGK55_11145 PF03454 MoeA C-terminal region (domain IV) BGK55_11145 PF03453 MoeA N-terminal region (domain I and II) BGK55_11150 PF00899 ThiF family BGK55_11175 PF08240 Alcohol dehydrogenase GroES-like domain BGK55_11175 PF00107 Zinc-binding dehydrogenase BGK55_11175 PF13823 Alcohol dehydrogenase GroES-associated BGK55_11190 PF13333 Integrase core domain BGK55_11190 PF00665 Integrase core domain BGK55_11190 PF13276 HTH-like domain BGK55_11225 PF00145 C-5 cytosine-specific DNA methylase BGK55_11255 PF13276 HTH-like domain BGK55_11255 PF13333 Integrase core domain BGK55_11255 PF00665 Integrase core domain BGK55_11260 PF01527 Transposase BGK55_11265 PF00665 Integrase core domain BGK55_11265 PF13333 Integrase core domain BGK55_11265 PF13276 HTH-like domain BGK55_11270 PF03377 TAL effector repeat BGK55_11280 PF03372 Endonuclease/Exonuclease/phosphatase family BGK55_11290 PF03453 MoeA N-terminal region (domain I and II) BGK55_11290 PF00994 Probable molybdopterin binding domain BGK55_11290 PF03454 MoeA C-terminal region (domain IV) BGK55_11295 PF12804 MobA-like NTP transferase domain BGK55_11305 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BGK55_11305 PF14824 Sirohaem biosynthesis protein central BGK55_11305 PF10414 Sirohaem synthase dimerisation region BGK55_11325 PF05974 Domain of unknown function (DUF892) BGK55_11345 PF00563 EAL domain BGK55_11345 PF00990 Diguanylate cyclase, GGDEF domain BGK55_11345 PF08447 PAS fold BGK55_11345 PF08448 PAS fold BGK55_11350 PF12951 Passenger-associated-transport-repeat BGK55_11350 PF12951 Passenger-associated-transport-repeat BGK55_11355 PF00072 Response regulator receiver domain BGK55_11355 PF00196 Bacterial regulatory proteins, luxR family BGK55_11360 PF00512 His Kinase A (phospho-acceptor) domain BGK55_11360 PF08448 PAS fold BGK55_11360 PF13426 PAS domain BGK55_11360 PF00072 Response regulator receiver domain BGK55_11360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_11370 PF00873 AcrB/AcrD/AcrF family BGK55_11375 PF00529 HlyD membrane-fusion protein of T1SS BGK55_11375 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BGK55_11380 PF03797 Autotransporter beta-domain BGK55_11380 PF00082 Subtilase family BGK55_11390 PF07694 5TMR of 5TMR-LYT BGK55_11390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_11390 PF06580 Histidine kinase BGK55_11395 PF00072 Response regulator receiver domain BGK55_11395 PF04397 LytTr DNA-binding domain BGK55_11405 PF00144 Beta-lactamase BGK55_11415 PF07995 Glucose / Sorbosone dehydrogenase BGK55_11430 PF09335 SNARE associated Golgi protein BGK55_11435 PF01494 FAD binding domain BGK55_11440 PF13276 HTH-like domain BGK55_11440 PF13333 Integrase core domain BGK55_11440 PF00665 Integrase core domain BGK55_11470 PF01106 NifU-like domain BGK55_11475 PF01329 Pterin 4 alpha carbinolamine dehydratase BGK55_11485 PF02535 ZIP Zinc transporter BGK55_11495 PF00849 RNA pseudouridylate synthase BGK55_11495 PF01479 S4 domain BGK55_11500 PF10150 Ribonuclease E/G family BGK55_11500 PF00575 S1 RNA binding domain BGK55_11500 PF12111 Polyribonucleotide phosphorylase C terminal BGK55_11505 PF00196 Bacterial regulatory proteins, luxR family BGK55_11505 PF00072 Response regulator receiver domain BGK55_11520 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BGK55_11530 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BGK55_11530 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BGK55_11530 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BGK55_11540 PF17837 4'-phosphopantetheinyl transferase N-terminal domain BGK55_11540 PF01648 4'-phosphopantetheinyl transferase superfamily BGK55_11545 PF00501 AMP-binding enzyme BGK55_11545 PF13193 AMP-binding enzyme C-terminal domain BGK55_11545 PF00668 Condensation domain BGK55_11545 PF00975 Thioesterase domain BGK55_11545 PF00550 Phosphopantetheine attachment site BGK55_11560 PF00665 Integrase core domain BGK55_11560 PF13333 Integrase core domain BGK55_11560 PF13276 HTH-like domain BGK55_11585 PF01618 MotA/TolQ/ExbB proton channel family BGK55_11590 PF13677 Membrane MotB of proton-channel complex MotA/MotB BGK55_11590 PF00691 OmpA family BGK55_11595 PF13614 AAA domain BGK55_11600 PF01584 CheW-like domain BGK55_11610 PF00072 Response regulator receiver domain BGK55_11615 PF01584 CheW-like domain BGK55_11615 PF09078 CheY binding BGK55_11615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_11615 PF01627 Hpt domain BGK55_11615 PF02895 Signal transducing histidine kinase, homodimeric domain BGK55_11620 PF02203 Tar ligand binding domain homologue BGK55_11620 PF00672 HAMP domain BGK55_11620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGK55_11630 PF00672 HAMP domain BGK55_11630 PF17200 Single Cache domain 2 BGK55_11630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGK55_11630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGK55_11630 PF00672 HAMP domain BGK55_11630 PF17200 Single Cache domain 2 BGK55_11635 PF02203 Tar ligand binding domain homologue BGK55_11635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGK55_11635 PF00672 HAMP domain BGK55_11645 PF02203 Tar ligand binding domain homologue BGK55_11645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGK55_11645 PF00672 HAMP domain BGK55_11650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGK55_11650 PF00672 HAMP domain BGK55_11655 PF02203 Tar ligand binding domain homologue BGK55_11655 PF00672 HAMP domain BGK55_11655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGK55_11670 PF02203 Tar ligand binding domain homologue BGK55_11670 PF00672 HAMP domain BGK55_11670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGK55_11675 PF02203 Tar ligand binding domain homologue BGK55_11675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGK55_11675 PF00672 HAMP domain BGK55_11680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGK55_11680 PF02203 Tar ligand binding domain homologue BGK55_11680 PF00672 HAMP domain BGK55_11690 PF07317 Flagellar regulator YcgR BGK55_11690 PF07238 PilZ domain BGK55_11695 PF01584 CheW-like domain BGK55_11705 PF02203 Tar ligand binding domain homologue BGK55_11705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGK55_11705 PF00672 HAMP domain BGK55_11710 PF01739 CheR methyltransferase, SAM binding domain BGK55_11710 PF03705 CheR methyltransferase, all-alpha domain BGK55_11715 PF03975 CheD chemotactic sensory transduction BGK55_11720 PF00072 Response regulator receiver domain BGK55_11720 PF01339 CheB methylesterase BGK55_11725 PF00990 Diguanylate cyclase, GGDEF domain BGK55_11725 PF00563 EAL domain BGK55_11725 PF03707 Bacterial signalling protein N terminal repeat BGK55_11730 PF00561 alpha/beta hydrolase fold BGK55_11735 PF06434 Aconitate hydratase 2 N-terminus BGK55_11735 PF11791 Aconitate B N-terminal domain BGK55_11735 PF00330 Aconitase family (aconitate hydratase) BGK55_11750 PF00694 Aconitase C-terminal domain BGK55_11750 PF00330 Aconitase family (aconitate hydratase) BGK55_11760 PF13193 AMP-binding enzyme C-terminal domain BGK55_11760 PF00501 AMP-binding enzyme BGK55_11765 PF00378 Enoyl-CoA hydratase/isomerase BGK55_11770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_11770 PF01627 Hpt domain BGK55_11770 PF00512 His Kinase A (phospho-acceptor) domain BGK55_11770 PF00072 Response regulator receiver domain BGK55_11775 PF00072 Response regulator receiver domain BGK55_11780 PF00152 tRNA synthetases class II (D, K and N) BGK55_11780 PF01336 OB-fold nucleic acid binding domain BGK55_11785 PF03462 PCRF domain BGK55_11785 PF00472 RF-1 domain BGK55_11790 PF00072 Response regulator receiver domain BGK55_11790 PF04397 LytTr DNA-binding domain BGK55_11815 PF01527 Transposase BGK55_11820 PF13276 HTH-like domain BGK55_11820 PF13683 Integrase core domain BGK55_11855 PF02272 DHHA1 domain BGK55_11855 PF01368 DHH family BGK55_11855 PF17768 RecJ OB domain BGK55_11865 PF01272 Transcription elongation factor, GreA/GreB, C-term BGK55_11865 PF03449 Transcription elongation factor, N-terminal BGK55_11870 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BGK55_11870 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BGK55_11870 PF02142 MGS-like domain BGK55_11880 PF00117 Glutamine amidotransferase class-I BGK55_11880 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BGK55_11885 PF01113 Dihydrodipicolinate reductase, N-terminus BGK55_11885 PF05173 Dihydrodipicolinate reductase, C-terminus BGK55_11895 PF00155 Aminotransferase class I and II BGK55_11910 PF07670 Nucleoside recognition BGK55_11910 PF02421 Ferrous iron transport protein B BGK55_11910 PF07664 Ferrous iron transport protein B C terminus BGK55_11920 PF00378 Enoyl-CoA hydratase/isomerase BGK55_11930 PF00682 HMGL-like BGK55_11935 PF00106 short chain dehydrogenase BGK55_11940 PF09285 Elongation factor P, C-terminal BGK55_11940 PF01132 Elongation factor P (EF-P) OB domain BGK55_11940 PF08207 Elongation factor P (EF-P) KOW-like domain BGK55_11960 PF01565 FAD binding domain BGK55_11960 PF02913 FAD linked oxidases, C-terminal domain BGK55_11965 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BGK55_11965 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BGK55_11965 PF01842 ACT domain BGK55_11975 PF13520 Amino acid permease BGK55_11980 PF13520 Amino acid permease BGK55_11985 PF00596 Class II Aldolase and Adducin N-terminal domain BGK55_11990 PF03079 ARD/ARD' family BGK55_12010 PF01502 Phosphoribosyl-AMP cyclohydrolase BGK55_12010 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BGK55_12015 PF00977 Histidine biosynthesis protein BGK55_12020 PF00977 Histidine biosynthesis protein BGK55_12025 PF00117 Glutamine amidotransferase class-I BGK55_12030 PF00475 Imidazoleglycerol-phosphate dehydratase BGK55_12035 PF00155 Aminotransferase class I and II BGK55_12040 PF00815 Histidinol dehydrogenase BGK55_12045 PF08029 HisG, C-terminal domain BGK55_12045 PF01634 ATP phosphoribosyltransferase BGK55_12055 PF03129 Anticodon binding domain BGK55_12055 PF13393 Histidyl-tRNA synthetase BGK55_12060 PF13545 Crp-like helix-turn-helix domain BGK55_12060 PF00027 Cyclic nucleotide-binding domain BGK55_12070 PF14821 Threonine synthase N terminus BGK55_12070 PF00291 Pyridoxal-phosphate dependent enzyme BGK55_12080 PF08544 GHMP kinases C terminal BGK55_12080 PF00288 GHMP kinases N terminal domain BGK55_12085 PF03447 Homoserine dehydrogenase, NAD binding domain BGK55_12085 PF00742 Homoserine dehydrogenase BGK55_12085 PF13840 ACT domain BGK55_12085 PF01842 ACT domain BGK55_12085 PF00696 Amino acid kinase family BGK55_12095 PF13332 Hemagglutinin repeat BGK55_12095 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain BGK55_12095 PF05860 haemagglutination activity domain BGK55_12095 PF05594 Haemagluttinin repeat BGK55_12095 PF13018 Extended Signal Peptide of Type V secretion system BGK55_12100 PF05860 haemagglutination activity domain BGK55_12100 PF04829 Pre-toxin domain with VENN motif BGK55_12100 PF13332 Hemagglutinin repeat BGK55_12125 PF17287 POTRA domain BGK55_12125 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB BGK55_12125 PF08479 POTRA domain, ShlB-type BGK55_12135 PF14883 Hypothetical glycosyl hydrolase family 13 BGK55_12135 PF01522 Polysaccharide deacetylase BGK55_12140 PF00535 Glycosyl transferase family 2 BGK55_12165 PF13086 AAA domain BGK55_12165 PF13086 AAA domain BGK55_12165 PF13195 Protein of unknown function (DUF4011) BGK55_12165 PF13195 Protein of unknown function (DUF4011) BGK55_12165 PF13087 AAA domain BGK55_12165 PF13087 AAA domain BGK55_12270 PF01527 Transposase BGK55_12275 PF13683 Integrase core domain BGK55_12275 PF13276 HTH-like domain BGK55_12300 PF00171 Aldehyde dehydrogenase family BGK55_12315 PF01180 Dihydroorotate dehydrogenase BGK55_12320 PF01565 FAD binding domain BGK55_12320 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BGK55_12325 PF00892 EamA-like transporter family BGK55_12330 PF01177 Asp/Glu/Hydantoin racemase BGK55_12335 PF07690 Major Facilitator Superfamily BGK55_12345 PF01569 PAP2 superfamily BGK55_12350 PF04551 GcpE protein BGK55_12360 PF00072 Response regulator receiver domain BGK55_12365 PF02013 Cellulose or protein binding domain BGK55_12365 PF00150 Cellulase (glycosyl hydrolase family 5) BGK55_12370 PF00360 Phytochrome region BGK55_12370 PF01590 GAF domain BGK55_12370 PF00563 EAL domain BGK55_12370 PF00990 Diguanylate cyclase, GGDEF domain BGK55_12375 PF00474 Sodium:solute symporter family BGK55_12380 PF00933 Glycosyl hydrolase family 3 N terminal domain BGK55_12380 PF01915 Glycosyl hydrolase family 3 C-terminal domain BGK55_12380 PF14310 Fibronectin type III-like domain BGK55_12400 PF00342 Phosphoglucose isomerase BGK55_12405 PF02261 Aspartate decarboxylase BGK55_12410 PF02569 Pantoate-beta-alanine ligase BGK55_12415 PF02548 Ketopantoate hydroxymethyltransferase BGK55_12420 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BGK55_12425 PF12627 Probable RNA and SrmB- binding site of polymerase A BGK55_12425 PF12626 Polymerase A arginine-rich C-terminus BGK55_12425 PF01743 Poly A polymerase head domain BGK55_12435 PF02649 Type I GTP cyclohydrolase folE2 BGK55_12440 PF01520 N-acetylmuramoyl-L-alanine amidase BGK55_12450 PF00083 Sugar (and other) transporter BGK55_12460 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BGK55_12460 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BGK55_12470 PF16338 Domain of unknown function (DUF4968) BGK55_12470 PF17137 Domain of unknown function (DUF5110) BGK55_12470 PF01055 Glycosyl hydrolases family 31 BGK55_12485 PF03442 Carbohydrate binding domain X2 BGK55_12485 PF00942 Cellulose binding domain BGK55_12500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGK55_12500 PF03466 LysR substrate binding domain BGK55_12510 PF01081 KDPG and KHG aldolase BGK55_12515 PF13378 Enolase C-terminal domain-like BGK55_12515 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BGK55_12520 PF08450 SMP-30/Gluconolactonase/LRE-like region BGK55_12525 PF05035 2-keto-3-deoxy-galactonokinase BGK55_12530 PF00037 4Fe-4S binding domain BGK55_12530 PF11953 Domain of unknown function (DUF3470) BGK55_12540 PF00701 Dihydrodipicolinate synthetase family BGK55_12555 PF00578 AhpC/TSA family BGK55_12560 PF13638 PIN domain BGK55_12560 PF02562 PhoH-like protein BGK55_12575 PF08543 Phosphomethylpyrimidine kinase BGK55_12600 PF13683 Integrase core domain BGK55_12600 PF13276 HTH-like domain BGK55_12605 PF01527 Transposase BGK55_12615 PF03466 LysR substrate binding domain BGK55_12615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGK55_12625 PF17954 Quercetinase C-terminal cupin domain BGK55_12625 PF02678 Pirin BGK55_12630 PF13426 PAS domain BGK55_12630 PF08447 PAS fold BGK55_12630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGK55_12640 PF02599 Global regulator protein family BGK55_12645 PF01411 tRNA synthetases class II (A) BGK55_12645 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BGK55_12645 PF02272 DHHA1 domain BGK55_12650 PF02631 RecX family BGK55_12655 PF00154 recA bacterial DNA recombination protein BGK55_12660 PF01726 LexA DNA binding domain BGK55_12660 PF00717 Peptidase S24-like BGK55_12665 PF03109 ABC1 family BGK55_12670 PF02464 Competence-damaged protein BGK55_12675 PF01926 50S ribosome-binding GTPase BGK55_12675 PF13167 GTP-binding GTPase N-terminal BGK55_12675 PF16360 GTP-binding GTPase Middle Region BGK55_12680 PF17209 Hfq protein BGK55_12690 PF00809 Pterin binding enzyme BGK55_12695 PF17862 AAA+ lid domain BGK55_12695 PF00004 ATPase family associated with various cellular activities (AAA) BGK55_12695 PF01434 Peptidase family M41 BGK55_12695 PF06480 FtsH Extracellular BGK55_12700 PF01728 FtsJ-like methyltransferase BGK55_12705 PF01985 CRS1 / YhbY (CRM) domain BGK55_12710 PF04430 Protein of unknown function (DUF498/DUF598) BGK55_12715 PF01551 Peptidase family M23 BGK55_12715 PF01476 LysM domain BGK55_12720 PF09335 SNARE associated Golgi protein BGK55_12730 PF01975 Survival protein SurE BGK55_12735 PF01713 Smr domain BGK55_12740 PF01142 tRNA pseudouridine synthase D (TruD) BGK55_12745 PF02542 YgbB family BGK55_12750 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BGK55_12755 PF04977 Septum formation initiator BGK55_12760 PF03952 Enolase, N-terminal domain BGK55_12760 PF00113 Enolase, C-terminal TIM barrel domain BGK55_12770 PF00793 DAHP synthetase I family BGK55_12775 PF06418 CTP synthase N-terminus BGK55_12775 PF00117 Glutamine amidotransferase class-I BGK55_12785 PF00986 DNA gyrase B subunit, carboxyl terminus BGK55_12785 PF01751 Toprim domain BGK55_12785 PF00204 DNA gyrase B BGK55_12785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_12800 PF01384 Phosphate transporter family BGK55_12810 PF03471 Transporter associated domain BGK55_12810 PF01595 Cyclin M transmembrane N-terminal domain BGK55_12810 PF00571 CBS domain BGK55_12825 PF00296 Luciferase-like monooxygenase BGK55_12830 PF07690 Major Facilitator Superfamily BGK55_12835 PF00005 ABC transporter BGK55_12835 PF00664 ABC transporter transmembrane region BGK55_12840 PF00005 ABC transporter BGK55_12875 PF08241 Methyltransferase domain BGK55_12890 PF00535 Glycosyl transferase family 2 BGK55_12895 PF01943 Polysaccharide biosynthesis protein BGK55_12900 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BGK55_12920 PF05523 WxcM-like, C-terminal BGK55_12935 PF00034 Cytochrome c BGK55_12945 PF13333 Integrase core domain BGK55_12945 PF00665 Integrase core domain BGK55_12945 PF13276 HTH-like domain BGK55_12985 PF08281 Sigma-70, region 4 BGK55_12985 PF04542 Sigma-70 region 2 BGK55_12995 PF00082 Subtilase family BGK55_13000 PF01578 Cytochrome C assembly protein BGK55_13010 PF03100 CcmE BGK55_13015 PF01578 Cytochrome C assembly protein BGK55_13015 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BGK55_13020 PF08534 Redoxin BGK55_13025 PF03918 Cytochrome C biogenesis protein BGK55_13035 PF00072 Response regulator receiver domain BGK55_13035 PF13426 PAS domain BGK55_13035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_13045 PF00512 His Kinase A (phospho-acceptor) domain BGK55_13045 PF00672 HAMP domain BGK55_13045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_13045 PF01627 Hpt domain BGK55_13045 PF00072 Response regulator receiver domain BGK55_13045 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BGK55_13070 PF01494 FAD binding domain BGK55_13075 PF00672 HAMP domain BGK55_13075 PF02203 Tar ligand binding domain homologue BGK55_13075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGK55_13090 PF03466 LysR substrate binding domain BGK55_13090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGK55_13095 PF02525 Flavodoxin-like fold BGK55_13100 PF02403 Seryl-tRNA synthetase N-terminal domain BGK55_13100 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BGK55_13105 PF03544 Gram-negative bacterial TonB protein C-terminal BGK55_13115 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BGK55_13120 PF01842 ACT domain BGK55_13120 PF01817 Chorismate mutase type II BGK55_13120 PF00800 Prephenate dehydratase BGK55_13125 PF00266 Aminotransferase class-V BGK55_13130 PF00174 Oxidoreductase molybdopterin binding domain BGK55_13135 PF01794 Ferric reductase like transmembrane component BGK55_13160 PF07702 UTRA domain BGK55_13160 PF00392 Bacterial regulatory proteins, gntR family BGK55_13175 PF07969 Amidohydrolase family BGK55_13180 PF00221 Aromatic amino acid lyase BGK55_13190 PF17391 Urocanase N-terminal domain BGK55_13190 PF17392 Urocanase C-terminal domain BGK55_13190 PF01175 Urocanase Rossmann-like domain BGK55_13200 PF13360 PQQ-like domain BGK55_13205 PF03989 DNA gyrase C-terminal domain, beta-propeller BGK55_13205 PF00521 DNA gyrase/topoisomerase IV, subunit A BGK55_13210 PF01008 Initiation factor 2 subunit family BGK55_13220 PF00152 tRNA synthetases class II (D, K and N) BGK55_13225 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BGK55_13225 PF12826 Helix-hairpin-helix motif BGK55_13225 PF03120 NAD-dependent DNA ligase OB-fold domain BGK55_13225 PF01653 NAD-dependent DNA ligase adenylation domain BGK55_13225 PF00533 BRCA1 C Terminus (BRCT) domain BGK55_13230 PF00155 Aminotransferase class I and II BGK55_13240 PF04354 ZipA, C-terminal FtsZ-binding domain BGK55_13245 PF02463 RecF/RecN/SMC N terminal domain BGK55_13250 PF01281 Ribosomal protein L9, N-terminal domain BGK55_13250 PF03948 Ribosomal protein L9, C-terminal domain BGK55_13255 PF01084 Ribosomal protein S18 BGK55_13260 PF01250 Ribosomal protein S6 BGK55_13265 PF01521 Iron-sulphur cluster biosynthesis BGK55_13270 PF01336 OB-fold nucleic acid binding domain BGK55_13270 PF00152 tRNA synthetases class II (D, K and N) BGK55_13290 PF04299 Putative FMN-binding domain BGK55_13310 PF00072 Response regulator receiver domain BGK55_13310 PF00196 Bacterial regulatory proteins, luxR family BGK55_13325 PF00665 Integrase core domain BGK55_13325 PF13276 HTH-like domain BGK55_13325 PF13333 Integrase core domain BGK55_13370 PF00484 Carbonic anhydrase BGK55_13375 PF06052 3-hydroxyanthranilic acid dioxygenase BGK55_13385 PF00266 Aminotransferase class-V BGK55_13390 PF01494 FAD binding domain BGK55_13395 PF08411 Exonuclease C-terminal BGK55_13395 PF00929 Exonuclease BGK55_13420 PF01513 ATP-NAD kinase BGK55_13425 PF02926 THUMP domain BGK55_13425 PF10672 S-adenosylmethionine-dependent methyltransferase BGK55_13425 PF01170 Putative RNA methylase family UPF0020 BGK55_13460 PF00581 Rhodanese-like domain BGK55_13465 PF00293 NUDIX domain BGK55_13470 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BGK55_13470 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BGK55_13475 PF00378 Enoyl-CoA hydratase/isomerase BGK55_13485 PF00633 Helix-hairpin-helix motif BGK55_13485 PF10576 Iron-sulfur binding domain of endonuclease III BGK55_13485 PF00730 HhH-GPD superfamily base excision DNA repair protein BGK55_13490 PF00916 Sulfate permease family BGK55_13490 PF01740 STAS domain BGK55_13495 PF00484 Carbonic anhydrase BGK55_13510 PF12849 PBP superfamily domain BGK55_13515 PF12849 PBP superfamily domain BGK55_13520 PF00528 Binding-protein-dependent transport system inner membrane component BGK55_13525 PF00528 Binding-protein-dependent transport system inner membrane component BGK55_13530 PF00005 ABC transporter BGK55_13535 PF01895 PhoU domain BGK55_13545 PF00929 Exonuclease BGK55_13550 PF07694 5TMR of 5TMR-LYT BGK55_13550 PF00990 Diguanylate cyclase, GGDEF domain BGK55_13555 PF00588 SpoU rRNA Methylase family BGK55_13555 PF08032 RNA 2'-O ribose methyltransferase substrate binding BGK55_13565 PF00575 S1 RNA binding domain BGK55_13565 PF08461 Ribonuclease R winged-helix domain BGK55_13565 PF17876 Cold shock domain BGK55_13565 PF08206 Ribonuclease B OB domain BGK55_13565 PF00773 RNB domain BGK55_13580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BGK55_13580 PF02770 Acyl-CoA dehydrogenase, middle domain BGK55_13580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BGK55_13585 PF01209 ubiE/COQ5 methyltransferase family BGK55_13590 PF02574 Homocysteine S-methyltransferase BGK55_13590 PF00809 Pterin binding enzyme BGK55_13605 PF00294 pfkB family carbohydrate kinase BGK55_13610 PF07690 Major Facilitator Superfamily BGK55_13615 PF00356 Bacterial regulatory proteins, lacI family BGK55_13630 PF04102 SlyX BGK55_13635 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BGK55_13635 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BGK55_13635 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BGK55_13640 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BGK55_13640 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BGK55_13645 PF00255 Glutathione peroxidase BGK55_13655 PF00392 Bacterial regulatory proteins, gntR family BGK55_13660 PF00005 ABC transporter BGK55_13685 PF00206 Lyase BGK55_13685 PF10415 Fumarase C C-terminus BGK55_13690 PF00571 CBS domain BGK55_13690 PF03471 Transporter associated domain BGK55_13690 PF01595 Cyclin M transmembrane N-terminal domain BGK55_13700 PF08328 Adenylosuccinate lyase C-terminal BGK55_13700 PF00206 Lyase BGK55_13710 PF08007 Cupin superfamily protein BGK55_13720 PF16078 2-oxoglutarate dehydrogenase N-terminus BGK55_13720 PF00676 Dehydrogenase E1 component BGK55_13720 PF16870 2-oxoglutarate dehydrogenase C-terminal BGK55_13720 PF02779 Transketolase, pyrimidine binding domain BGK55_13725 PF02817 e3 binding domain BGK55_13725 PF00364 Biotin-requiring enzyme BGK55_13725 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BGK55_13730 PF07992 Pyridine nucleotide-disulphide oxidoreductase BGK55_13730 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BGK55_13735 PF03641 Possible lysine decarboxylase BGK55_13740 PF01205 Uncharacterized protein family UPF0029 BGK55_13745 PF00664 ABC transporter transmembrane region BGK55_13745 PF00005 ABC transporter BGK55_13750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGK55_13750 PF03466 LysR substrate binding domain BGK55_13755 PF00664 ABC transporter transmembrane region BGK55_13755 PF03412 Peptidase C39 family BGK55_13755 PF00005 ABC transporter BGK55_13780 PF08543 Phosphomethylpyrimidine kinase BGK55_13785 PF00226 DnaJ domain BGK55_13785 PF01556 DnaJ C terminal domain BGK55_13785 PF00684 DnaJ central domain BGK55_13790 PF00012 Hsp70 protein BGK55_13795 PF01025 GrpE BGK55_13800 PF01628 HrcA protein C terminal domain BGK55_13800 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding BGK55_13805 PF02463 RecF/RecN/SMC N terminal domain BGK55_13810 PF01475 Ferric uptake regulator family BGK55_13815 PF04355 SmpA / OmlA family BGK55_13820 PF03658 RnfH family Ubiquitin BGK55_13825 PF03364 Polyketide cyclase / dehydrase and lipid transport BGK55_13830 PF01668 SmpB protein BGK55_13835 PF00082 Subtilase family BGK55_13855 PF13333 Integrase core domain BGK55_13855 PF13276 HTH-like domain BGK55_13855 PF00665 Integrase core domain BGK55_13880 PF00990 Diguanylate cyclase, GGDEF domain BGK55_13890 PF00990 Diguanylate cyclase, GGDEF domain BGK55_13890 PF08448 PAS fold BGK55_13900 PF02321 Outer membrane efflux protein BGK55_13905 PF00106 short chain dehydrogenase BGK55_13910 PF00873 AcrB/AcrD/AcrF family BGK55_13915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BGK55_13930 PF03466 LysR substrate binding domain BGK55_13930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGK55_13935 PF00691 OmpA family BGK55_13935 PF05736 OprF membrane domain BGK55_13940 PF03441 FAD binding domain of DNA photolyase BGK55_13940 PF00875 DNA photolyase BGK55_13945 PF03796 DnaB-like helicase C terminal domain BGK55_13945 PF00772 DnaB-like helicase N terminal domain BGK55_13950 PF03358 NADPH-dependent FMN reductase BGK55_13955 PF00733 Asparagine synthase BGK55_13955 PF13537 Glutamine amidotransferase domain BGK55_13965 PF00043 Glutathione S-transferase, C-terminal domain BGK55_13965 PF02798 Glutathione S-transferase, N-terminal domain BGK55_13975 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BGK55_13975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BGK55_13975 PF02770 Acyl-CoA dehydrogenase, middle domain BGK55_13990 PF01026 TatD related DNase BGK55_13995 PF00899 ThiF family BGK55_14010 PF00313 'Cold-shock' DNA-binding domain BGK55_14020 PF02253 Phospholipase A1 BGK55_14025 PF00484 Carbonic anhydrase BGK55_14035 PF05681 Fumarate hydratase (Fumerase) BGK55_14035 PF05683 Fumarase C-terminus BGK55_14040 PF00005 ABC transporter BGK55_14045 PF00970 Oxidoreductase FAD-binding domain BGK55_14045 PF00175 Oxidoreductase NAD-binding domain BGK55_14050 PF00255 Glutathione peroxidase BGK55_14055 PF01432 Peptidase family M3 BGK55_14060 PF12802 MarR family BGK55_14085 PF00854 POT family BGK55_14095 PF01915 Glycosyl hydrolase family 3 C-terminal domain BGK55_14095 PF00933 Glycosyl hydrolase family 3 N terminal domain BGK55_14095 PF14310 Fibronectin type III-like domain BGK55_14105 PF07690 Major Facilitator Superfamily BGK55_14110 PF00529 HlyD membrane-fusion protein of T1SS BGK55_14110 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BGK55_14115 PF02321 Outer membrane efflux protein BGK55_14130 PF03989 DNA gyrase C-terminal domain, beta-propeller BGK55_14130 PF00521 DNA gyrase/topoisomerase IV, subunit A BGK55_14135 PF05724 Thiopurine S-methyltransferase (TPMT) BGK55_14140 PF00210 Ferritin-like domain BGK55_14145 PF01804 Penicillin amidase BGK55_14155 PF07715 TonB-dependent Receptor Plug Domain BGK55_14155 PF00593 TonB dependent receptor BGK55_14165 PF13537 Glutamine amidotransferase domain BGK55_14165 PF00733 Asparagine synthase BGK55_14170 PF07687 Peptidase dimerisation domain BGK55_14170 PF01546 Peptidase family M20/M25/M40 BGK55_14175 PF03960 ArsC family BGK55_14180 PF00132 Bacterial transferase hexapeptide (six repeats) BGK55_14180 PF14602 Hexapeptide repeat of succinyl-transferase BGK55_14180 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal BGK55_14185 PF08335 GlnD PII-uridylyltransferase BGK55_14185 PF01909 Nucleotidyltransferase domain BGK55_14185 PF01966 HD domain BGK55_14190 PF00557 Metallopeptidase family M24 BGK55_14225 PF00318 Ribosomal protein S2 BGK55_14230 PF00889 Elongation factor TS BGK55_14235 PF00072 Response regulator receiver domain BGK55_14235 PF00990 Diguanylate cyclase, GGDEF domain BGK55_14240 PF00696 Amino acid kinase family BGK55_14245 PF01765 Ribosome recycling factor BGK55_14250 PF01255 Putative undecaprenyl diphosphate synthase BGK55_14260 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BGK55_14260 PF13288 DXP reductoisomerase C-terminal domain BGK55_14260 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BGK55_14265 PF17820 PDZ domain BGK55_14265 PF02163 Peptidase family M50 BGK55_14270 PF01103 Surface antigen BGK55_14270 PF07244 Surface antigen variable number repeat BGK55_14280 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BGK55_14280 PF00132 Bacterial transferase hexapeptide (six repeats) BGK55_14285 PF07977 FabA-like domain BGK55_14290 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BGK55_14290 PF00132 Bacterial transferase hexapeptide (six repeats) BGK55_14295 PF02684 Lipid-A-disaccharide synthetase BGK55_14300 PF01351 Ribonuclease HII BGK55_14305 PF01336 OB-fold nucleic acid binding domain BGK55_14305 PF07733 Bacterial DNA polymerase III alpha NTPase domain BGK55_14305 PF02811 PHP domain BGK55_14305 PF14579 Helix-hairpin-helix motif BGK55_14305 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BGK55_14310 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BGK55_14345 PF03551 Transcriptional regulator PadR-like family BGK55_14365 PF02592 Putative vitamin uptake transporter BGK55_14375 PF02574 Homocysteine S-methyltransferase BGK55_14380 PF00324 Amino acid permease BGK55_14385 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BGK55_14390 PF00005 ABC transporter BGK55_14390 PF13732 Domain of unknown function (DUF4162) BGK55_14405 PF01588 Putative tRNA binding domain BGK55_14405 PF09334 tRNA synthetases class I (M) BGK55_14415 PF04060 Putative Fe-S cluster BGK55_14435 PF04542 Sigma-70 region 2 BGK55_14435 PF04545 Sigma-70, region 4 BGK55_14480 PF01042 Endoribonuclease L-PSP BGK55_14490 PF09924 Uncharacterised conserved protein (DUF2156) BGK55_14490 PF03706 Lysylphosphatidylglycerol synthase TM region BGK55_14525 PF07690 Major Facilitator Superfamily BGK55_14535 PF03831 PhnA domain BGK55_14535 PF08274 PhnA Zinc-Ribbon BGK55_14545 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BGK55_14570 PF01258 Prokaryotic dksA/traR C4-type zinc finger BGK55_14580 PF07043 Protein of unknown function (DUF1328) BGK55_14585 PF01863 Protein of unknown function DUF45 BGK55_14600 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BGK55_14600 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BGK55_14605 PF03797 Autotransporter beta-domain BGK55_14605 PF00082 Subtilase family BGK55_14605 PF12951 Passenger-associated-transport-repeat BGK55_14610 PF00108 Thiolase, N-terminal domain BGK55_14610 PF02803 Thiolase, C-terminal domain BGK55_14625 PF00990 Diguanylate cyclase, GGDEF domain BGK55_14625 PF00072 Response regulator receiver domain BGK55_14640 PF04675 DNA ligase N terminus BGK55_14640 PF01068 ATP dependent DNA ligase domain BGK55_14640 PF04679 ATP dependent DNA ligase C terminal region BGK55_14650 PF04679 ATP dependent DNA ligase C terminal region BGK55_14650 PF01068 ATP dependent DNA ligase domain BGK55_14650 PF04675 DNA ligase N terminus BGK55_14655 PF00270 DEAD/DEAH box helicase BGK55_14655 PF00271 Helicase conserved C-terminal domain BGK55_14655 PF08494 DEAD/H associated BGK55_14665 PF01494 FAD binding domain BGK55_14670 PF00313 'Cold-shock' DNA-binding domain BGK55_14675 PF01048 Phosphorylase superfamily BGK55_14685 PF00933 Glycosyl hydrolase family 3 N terminal domain BGK55_14690 PF04244 Deoxyribodipyrimidine photo-lyase-related protein BGK55_14700 PF01323 DSBA-like thioredoxin domain BGK55_14710 PF05958 tRNA (Uracil-5-)-methyltransferase BGK55_14720 PF11967 Recombination protein O N terminal BGK55_14720 PF02565 Recombination protein O C terminal BGK55_14725 PF01926 50S ribosome-binding GTPase BGK55_14725 PF07650 KH domain BGK55_14730 PF00035 Double-stranded RNA binding motif BGK55_14730 PF14622 Ribonuclease-III-like BGK55_14740 PF10502 Signal peptidase, peptidase S26 BGK55_14745 PF06421 GTP-binding protein LepA C-terminus BGK55_14745 PF00009 Elongation factor Tu GTP binding domain BGK55_14745 PF00679 Elongation factor G C-terminus BGK55_14745 PF03144 Elongation factor Tu domain 2 BGK55_14750 PF13180 PDZ domain BGK55_14760 PF08281 Sigma-70, region 4 BGK55_14760 PF04542 Sigma-70 region 2 BGK55_14765 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BGK55_14765 PF00378 Enoyl-CoA hydratase/isomerase BGK55_14765 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BGK55_14770 PF01545 Cation efflux family BGK55_14775 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BGK55_14775 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BGK55_14780 PF00378 Enoyl-CoA hydratase/isomerase BGK55_14780 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BGK55_14780 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BGK55_14785 PF00378 Enoyl-CoA hydratase/isomerase BGK55_14790 PF02770 Acyl-CoA dehydrogenase, middle domain BGK55_14790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BGK55_14790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BGK55_14795 PF00171 Aldehyde dehydrogenase family BGK55_14800 PF06114 IrrE N-terminal-like domain BGK55_14800 PF09856 Predicted transcriptional regulator (DUF2083) BGK55_14800 PF01381 Helix-turn-helix BGK55_14810 PF07745 Glycosyl hydrolase family 53 BGK55_14860 PF05593 RHS Repeat BGK55_14860 PF03527 RHS protein BGK55_14880 PF13276 HTH-like domain BGK55_14880 PF00665 Integrase core domain BGK55_14880 PF13333 Integrase core domain BGK55_14885 PF05190 MutS family domain IV BGK55_14885 PF05192 MutS domain III BGK55_14885 PF05188 MutS domain II BGK55_14885 PF00488 MutS domain V BGK55_14885 PF01624 MutS domain I BGK55_14895 PF00141 Peroxidase BGK55_14900 PF01479 S4 domain BGK55_14920 PF01554 MatE BGK55_14925 PF01245 Ribosomal protein L19 BGK55_14930 PF01746 tRNA (Guanine-1)-methyltransferase BGK55_14935 PF01782 RimM N-terminal domain BGK55_14935 PF05239 PRC-barrel domain BGK55_14940 PF00886 Ribosomal protein S16 BGK55_14945 PF01063 Amino-transferase class IV BGK55_14950 PF03060 Nitronate monooxygenase BGK55_14960 PF02881 SRP54-type protein, helical bundle domain BGK55_14960 PF00448 SRP54-type protein, GTPase domain BGK55_14960 PF02978 Signal peptide binding domain BGK55_14965 PF01578 Cytochrome C assembly protein BGK55_14970 PF01263 Aldose 1-epimerase BGK55_14980 PF06964 Alpha-L-arabinofuranosidase C-terminal domain BGK55_14990 PF00072 Response regulator receiver domain BGK55_14995 PF00072 Response regulator receiver domain BGK55_14995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_14995 PF13426 PAS domain BGK55_15000 PF00072 Response regulator receiver domain BGK55_15000 PF00512 His Kinase A (phospho-acceptor) domain BGK55_15000 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BGK55_15000 PF00672 HAMP domain BGK55_15000 PF01627 Hpt domain BGK55_15000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_15005 PF01739 CheR methyltransferase, SAM binding domain BGK55_15005 PF03705 CheR methyltransferase, all-alpha domain BGK55_15010 PF01339 CheB methylesterase BGK55_15015 PF00072 Response regulator receiver domain BGK55_15015 PF00990 Diguanylate cyclase, GGDEF domain BGK55_15020 PF07237 Protein of unknown function (DUF1428) BGK55_15025 PF00085 Thioredoxin BGK55_15030 PF00593 TonB dependent receptor BGK55_15030 PF07715 TonB-dependent Receptor Plug Domain BGK55_15035 PF04616 Glycosyl hydrolases family 43 BGK55_15035 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BGK55_15040 PF08448 PAS fold BGK55_15040 PF13188 PAS domain BGK55_15040 PF00072 Response regulator receiver domain BGK55_15040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_15040 PF00512 His Kinase A (phospho-acceptor) domain BGK55_15045 PF00512 His Kinase A (phospho-acceptor) domain BGK55_15045 PF00672 HAMP domain BGK55_15045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_15045 PF01627 Hpt domain BGK55_15045 PF17149 Periplasmic sensor domain found in signal transduction proteins BGK55_15045 PF00072 Response regulator receiver domain BGK55_15055 PF13581 Histidine kinase-like ATPase domain BGK55_15060 PF01740 STAS domain BGK55_15065 PF01740 STAS domain BGK55_15065 PF08678 Rsbr N terminal BGK55_15075 PF00183 Hsp90 protein BGK55_15075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_15080 PF12833 Helix-turn-helix domain BGK55_15090 PF05656 Protein of unknown function (DUF805) BGK55_15095 PF18073 Rubredoxin metal binding domain BGK55_15105 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BGK55_15110 PF00510 Cytochrome c oxidase subunit III BGK55_15115 PF00115 Cytochrome C and Quinol oxidase polypeptide I BGK55_15120 PF06481 COX Aromatic Rich Motif BGK55_15120 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BGK55_15125 PF00589 Phage integrase family BGK55_15155 PF13087 AAA domain BGK55_15155 PF13091 PLD-like domain BGK55_15160 PF03389 MobA/MobL family BGK55_15245 PF02401 LytB protein BGK55_15250 PF01252 Signal peptidase (SPase) II BGK55_15255 PF06827 Zinc finger found in FPG and IleRS BGK55_15255 PF08264 Anticodon-binding domain of tRNA BGK55_15255 PF00133 tRNA synthetases class I (I, L, M and V) BGK55_15260 PF01687 Riboflavin kinase BGK55_15260 PF06574 FAD synthetase BGK55_15265 PF03023 Lipid II flippase MurJ BGK55_15275 PF01926 50S ribosome-binding GTPase BGK55_15275 PF01018 GTP1/OBG BGK55_15280 PF01016 Ribosomal L27 protein BGK55_15285 PF00829 Ribosomal prokaryotic L21 protein BGK55_15290 PF17760 UvrA interaction domain BGK55_15290 PF00005 ABC transporter BGK55_15290 PF17755 UvrA DNA-binding domain BGK55_15305 PF00378 Enoyl-CoA hydratase/isomerase BGK55_15335 PF04377 Arginine-tRNA-protein transferase, C terminus BGK55_15335 PF04376 Arginine-tRNA-protein transferase, N terminus BGK55_15345 PF02222 ATP-grasp domain BGK55_15370 PF00730 HhH-GPD superfamily base excision DNA repair protein BGK55_15385 PF00072 Response regulator receiver domain BGK55_15385 PF00196 Bacterial regulatory proteins, luxR family BGK55_15390 PF07730 Histidine kinase BGK55_15405 PF05209 Septum formation inhibitor MinC, N-terminal domain BGK55_15405 PF03775 Septum formation inhibitor MinC, C-terminal domain BGK55_15410 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BGK55_15415 PF03776 Septum formation topological specificity factor MinE BGK55_15425 PF08521 Two-component sensor kinase N-terminal BGK55_15425 PF00512 His Kinase A (phospho-acceptor) domain BGK55_15425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_15430 PF00072 Response regulator receiver domain BGK55_15430 PF00486 Transcriptional regulatory protein, C terminal BGK55_15445 PF00884 Sulfatase BGK55_15445 PF08019 Phosphoethanolamine transferase EptA/EptB BGK55_15460 PF07690 Major Facilitator Superfamily BGK55_15465 PF02347 Glycine cleavage system P-protein BGK55_15470 PF00135 Carboxylesterase family BGK55_15475 PF00248 Aldo/keto reductase family BGK55_15480 PF06628 Catalase-related immune-responsive BGK55_15480 PF18011 C-terminal domain found in long catalases BGK55_15480 PF00199 Catalase BGK55_15510 PF12833 Helix-turn-helix domain BGK55_15510 PF02311 AraC-like ligand binding domain BGK55_15550 PF03169 OPT oligopeptide transporter protein BGK55_15560 PF00326 Prolyl oligopeptidase family BGK55_15565 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BGK55_15565 PF14579 Helix-hairpin-helix motif BGK55_15565 PF02811 PHP domain BGK55_15565 PF07733 Bacterial DNA polymerase III alpha NTPase domain BGK55_15580 PF01726 LexA DNA binding domain BGK55_15580 PF00717 Peptidase S24-like BGK55_15615 PF01799 [2Fe-2S] binding domain BGK55_15615 PF00111 2Fe-2S iron-sulfur cluster binding domain BGK55_15620 PF00941 FAD binding domain in molybdopterin dehydrogenase BGK55_15620 PF03450 CO dehydrogenase flavoprotein C-terminal domain BGK55_15630 PF17755 UvrA DNA-binding domain BGK55_15650 PF07992 Pyridine nucleotide-disulphide oxidoreductase BGK55_15660 PF00106 short chain dehydrogenase BGK55_15665 PF17678 Glycosyl hydrolase family 92 N-terminal domain BGK55_15665 PF07971 Glycosyl hydrolase family 92 BGK55_15700 PF01555 DNA methylase BGK55_15715 PF00271 Helicase conserved C-terminal domain BGK55_15715 PF00176 SNF2 family N-terminal domain BGK55_15740 PF00440 Bacterial regulatory proteins, tetR family BGK55_15755 PF11838 ERAP1-like C-terminal domain BGK55_15755 PF01433 Peptidase family M1 domain BGK55_15760 PF00709 Adenylosuccinate synthetase BGK55_15770 PF01145 SPFH domain / Band 7 family BGK55_15775 PF12221 Bacterial membrane protein N terminal BGK55_15775 PF01145 SPFH domain / Band 7 family BGK55_15780 PF00072 Response regulator receiver domain BGK55_15785 PF01556 DnaJ C terminal domain BGK55_15785 PF00226 DnaJ domain BGK55_15795 PF08534 Redoxin BGK55_15805 PF00905 Penicillin binding protein transpeptidase domain BGK55_15805 PF00912 Transglycosylase BGK55_15805 PF06832 Penicillin-Binding Protein C-terminus Family BGK55_15835 PF04303 PrpF protein BGK55_15845 PF00694 Aconitase C-terminal domain BGK55_15845 PF00330 Aconitase family (aconitate hydratase) BGK55_15850 PF00285 Citrate synthase, C-terminal domain BGK55_15860 PF00158 Sigma-54 interaction domain BGK55_15860 PF06506 Propionate catabolism activator BGK55_15860 PF02954 Bacterial regulatory protein, Fis family BGK55_15880 PF09115 DNA polymerase III, delta subunit, C terminal BGK55_15885 PF02618 YceG-like family BGK55_15890 PF00425 chorismate binding enzyme BGK55_15890 PF04715 Anthranilate synthase component I, N terminal region BGK55_15895 PF02801 Beta-ketoacyl synthase, C-terminal domain BGK55_15895 PF00109 Beta-ketoacyl synthase, N-terminal domain BGK55_15900 PF00550 Phosphopantetheine attachment site BGK55_15910 PF00698 Acyl transferase domain BGK55_15920 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BGK55_15920 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BGK55_15925 PF01783 Ribosomal L32p protein family BGK55_15930 PF02620 Large ribosomal RNA subunit accumulation protein YceD BGK55_15935 PF02545 Maf-like protein BGK55_15955 PF17863 AAA lid domain BGK55_15955 PF07726 ATPase family associated with various cellular activities (AAA) BGK55_15965 PF01841 Transglutaminase-like superfamily BGK55_15965 PF11992 Domain of unknown function (DUF3488) BGK55_15965 PF13559 Domain of unknown function (DUF4129) BGK55_15975 PF01230 HIT domain BGK55_15980 PF13662 Toprim domain BGK55_15980 PF02132 RecR protein BGK55_15985 PF02575 YbaB/EbfC DNA-binding family BGK55_15990 PF12169 DNA polymerase III subunits gamma and tau domain III BGK55_15990 PF12170 DNA polymerase III tau subunit V interacting with alpha BGK55_16005 PF02391 MoaE protein BGK55_16010 PF02597 ThiS family BGK55_16015 PF01967 MoaC family BGK55_16025 PF04055 Radical SAM superfamily BGK55_16025 PF06463 Molybdenum Cofactor Synthesis C BGK55_16030 PF00753 Metallo-beta-lactamase superfamily BGK55_16030 PF12706 Beta-lactamase superfamily domain BGK55_16040 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BGK55_16060 PF00929 Exonuclease BGK55_16065 PF00075 RNase H BGK55_16075 PF16123 Hydroxyacylglutathione hydrolase C-terminus BGK55_16075 PF00753 Metallo-beta-lactamase superfamily BGK55_16080 PF01476 LysM domain BGK55_16080 PF05257 CHAP domain BGK55_16105 PF00216 Bacterial DNA-binding protein BGK55_16110 PF02190 ATP-dependent protease La (LON) substrate-binding domain BGK55_16110 PF05362 Lon protease (S16) C-terminal proteolytic domain BGK55_16110 PF00004 ATPase family associated with various cellular activities (AAA) BGK55_16115 PF10431 C-terminal, D2-small domain, of ClpB protein BGK55_16115 PF07724 AAA domain (Cdc48 subfamily) BGK55_16115 PF06689 ClpX C4-type zinc finger BGK55_16120 PF00574 Clp protease BGK55_16125 PF05698 Bacterial trigger factor protein (TF) C-terminus BGK55_16125 PF05697 Bacterial trigger factor protein (TF) BGK55_16135 PF00989 PAS fold BGK55_16135 PF00512 His Kinase A (phospho-acceptor) domain BGK55_16135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_16150 PF13276 HTH-like domain BGK55_16150 PF13683 Integrase core domain BGK55_16155 PF01527 Transposase BGK55_16165 PF00665 Integrase core domain BGK55_16165 PF13276 HTH-like domain BGK55_16165 PF13333 Integrase core domain BGK55_16240 PF01527 Transposase BGK55_16245 PF13683 Integrase core domain BGK55_16245 PF13276 HTH-like domain BGK55_16310 PF03797 Autotransporter beta-domain BGK55_16310 PF00657 GDSL-like Lipase/Acylhydrolase BGK55_16320 PF05690 Thiazole biosynthesis protein ThiG BGK55_16325 PF02390 Putative methyltransferase BGK55_16330 PF02080 TrkA-C domain BGK55_16330 PF03600 Citrate transporter BGK55_16345 PF01557 Fumarylacetoacetate (FAA) hydrolase family BGK55_16350 PF01741 Large-conductance mechanosensitive channel, MscL BGK55_16365 PF00356 Bacterial regulatory proteins, lacI family BGK55_16375 PF00703 Glycosyl hydrolases family 2 BGK55_16375 PF02837 Glycosyl hydrolases family 2, sugar binding domain BGK55_16375 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain BGK55_16380 PF14508 Glycosyl-hydrolase 97 N-terminal BGK55_16380 PF10566 Glycoside hydrolase 97 BGK55_16380 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation BGK55_16390 PF00135 Carboxylesterase family BGK55_16395 PF00588 SpoU rRNA Methylase family BGK55_16395 PF08032 RNA 2'-O ribose methyltransferase substrate binding BGK55_16405 PF11838 ERAP1-like C-terminal domain BGK55_16405 PF01433 Peptidase family M1 domain BGK55_16425 PF00873 AcrB/AcrD/AcrF family BGK55_16430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BGK55_16430 PF00529 HlyD membrane-fusion protein of T1SS BGK55_16435 PF00009 Elongation factor Tu GTP binding domain BGK55_16440 PF01507 Phosphoadenosine phosphosulfate reductase family BGK55_16445 PF00667 FAD binding domain BGK55_16445 PF00258 Flavodoxin BGK55_16445 PF00175 Oxidoreductase NAD-binding domain BGK55_16450 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BGK55_16450 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BGK55_16455 PF01507 Phosphoadenosine phosphosulfate reductase family BGK55_16475 PF00072 Response regulator receiver domain BGK55_16475 PF01627 Hpt domain BGK55_16475 PF00512 His Kinase A (phospho-acceptor) domain BGK55_16475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_16490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGK55_16490 PF03466 LysR substrate binding domain BGK55_16495 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BGK55_16495 PF10414 Sirohaem synthase dimerisation region BGK55_16495 PF14824 Sirohaem biosynthesis protein central BGK55_16500 PF00291 Pyridoxal-phosphate dependent enzyme BGK55_16510 PF01661 Macro domain BGK55_16515 PF00274 Fructose-bisphosphate aldolase class-I BGK55_16520 PF02887 Pyruvate kinase, alpha/beta domain BGK55_16520 PF00224 Pyruvate kinase, barrel domain BGK55_16530 PF00162 Phosphoglycerate kinase BGK55_16550 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BGK55_16550 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BGK55_16560 PF03922 OmpW family BGK55_16565 PF03922 OmpW family BGK55_16575 PF04273 Putative phosphatase (DUF442) BGK55_16575 PF00753 Metallo-beta-lactamase superfamily BGK55_16585 PF00528 Binding-protein-dependent transport system inner membrane component BGK55_16590 PF00005 ABC transporter BGK55_16590 PF03459 TOBE domain BGK55_16625 PF03734 L,D-transpeptidase catalytic domain BGK55_16625 PF01476 LysM domain BGK55_16630 PF01551 Peptidase family M23 BGK55_16630 PF04225 Opacity-associated protein A LysM-like domain BGK55_16650 PF00593 TonB dependent receptor BGK55_16650 PF07715 TonB-dependent Receptor Plug Domain BGK55_16670 PF02779 Transketolase, pyrimidine binding domain BGK55_16670 PF02780 Transketolase, C-terminal domain BGK55_16670 PF00456 Transketolase, thiamine diphosphate binding domain BGK55_16675 PF00375 Sodium:dicarboxylate symporter family BGK55_16685 PF00092 von Willebrand factor type A domain BGK55_16685 PF07584 Aerotolerance regulator N-terminal BGK55_16705 PF17863 AAA lid domain BGK55_16705 PF07726 ATPase family associated with various cellular activities (AAA) BGK55_16710 PF03958 Bacterial type II/III secretion system short domain BGK55_16710 PF00263 Bacterial type II and III secretion system protein BGK55_16710 PF11741 AMIN domain BGK55_16710 PF07660 Secretin and TonB N terminus short domain BGK55_16735 PF17092 Penicillin-binding protein OB-like domain BGK55_16735 PF00905 Penicillin binding protein transpeptidase domain BGK55_16735 PF00912 Transglycosylase BGK55_16745 PF00285 Citrate synthase, C-terminal domain BGK55_16750 PF01197 Ribosomal protein L31 BGK55_16755 PF01156 Inosine-uridine preferring nucleoside hydrolase BGK55_16760 PF00270 DEAD/DEAH box helicase BGK55_16760 PF00271 Helicase conserved C-terminal domain BGK55_16760 PF17191 RecG wedge domain BGK55_16765 PF01042 Endoribonuclease L-PSP BGK55_16770 PF13291 ACT domain BGK55_16770 PF04607 Region found in RelA / SpoT proteins BGK55_16770 PF02824 TGS domain BGK55_16775 PF01192 RNA polymerase Rpb6 BGK55_16780 PF00625 Guanylate kinase BGK55_16785 PF08340 Domain of unknown function (DUF1732) BGK55_16785 PF03755 YicC-like family, N-terminal region BGK55_16790 PF01138 3' exoribonuclease family, domain 1 BGK55_16790 PF03725 3' exoribonuclease family, domain 2 BGK55_16800 PF01725 Ham1 family BGK55_16805 PF06969 HemN C-terminal domain BGK55_16805 PF04055 Radical SAM superfamily BGK55_16820 PF00557 Metallopeptidase family M24 BGK55_16830 PF05195 Aminopeptidase P, N-terminal domain BGK55_16830 PF00557 Metallopeptidase family M24 BGK55_16835 PF03695 Uncharacterised protein family (UPF0149) BGK55_16845 PF05164 Cell division protein ZapA BGK55_16855 PF01812 5-formyltetrahydrofolate cyclo-ligase family BGK55_16865 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BGK55_16875 PF13369 Transglutaminase-like superfamily BGK55_16880 PF00301 Rubredoxin BGK55_16885 PF02581 Thiamine monophosphate synthase BGK55_16895 PF00202 Aminotransferase class-III BGK55_16900 PF00196 Bacterial regulatory proteins, luxR family BGK55_16900 PF17874 MalT-like TPR region BGK55_16905 PF00127 Copper binding proteins, plastocyanin/azurin family BGK55_16910 PF00155 Aminotransferase class I and II BGK55_16920 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BGK55_16920 PF00034 Cytochrome c BGK55_16925 PF01593 Flavin containing amine oxidoreductase BGK55_16940 PF00202 Aminotransferase class-III BGK55_16945 PF00027 Cyclic nucleotide-binding domain BGK55_16945 PF00520 Ion transport protein BGK55_16960 PF01569 PAP2 superfamily BGK55_16965 PF01062 Bestrophin, RFP-TM, chloride channel BGK55_16975 PF08245 Mur ligase middle domain BGK55_16975 PF01225 Mur ligase family, catalytic domain BGK55_16975 PF02875 Mur ligase family, glutamate ligase domain BGK55_16985 PF00365 Phosphofructokinase BGK55_16995 PF03030 Inorganic H+ pyrophosphatase BGK55_17005 PF00719 Inorganic pyrophosphatase BGK55_17015 PF07715 TonB-dependent Receptor Plug Domain BGK55_17015 PF00593 TonB dependent receptor BGK55_17020 PF12833 Helix-turn-helix domain BGK55_17025 PF18500 CadC C-terminal domain 1 BGK55_17025 PF00486 Transcriptional regulatory protein, C terminal BGK55_17030 PF01964 Radical SAM ThiC family BGK55_17030 PF13667 ThiC-associated domain BGK55_17035 PF07715 TonB-dependent Receptor Plug Domain BGK55_17035 PF00593 TonB dependent receptor BGK55_17040 PF02203 Tar ligand binding domain homologue BGK55_17040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGK55_17040 PF00672 HAMP domain BGK55_17050 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BGK55_17050 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BGK55_17055 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BGK55_17055 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BGK55_17055 PF00205 Thiamine pyrophosphate enzyme, central domain BGK55_17065 PF00291 Pyridoxal-phosphate dependent enzyme BGK55_17070 PF08502 LeuA allosteric (dimerisation) domain BGK55_17070 PF00682 HMGL-like BGK55_17075 PF00180 Isocitrate/isopropylmalate dehydrogenase BGK55_17080 PF00694 Aconitase C-terminal domain BGK55_17085 PF00330 Aconitase family (aconitate hydratase) BGK55_17090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGK55_17095 PF00990 Diguanylate cyclase, GGDEF domain BGK55_17095 PF17151 Periplasmic sensor domain BGK55_17110 PF02321 Outer membrane efflux protein BGK55_17115 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BGK55_17120 PF03279 Bacterial lipid A biosynthesis acyltransferase BGK55_17145 PF00390 Malic enzyme, N-terminal domain BGK55_17145 PF01515 Phosphate acetyl/butaryl transferase BGK55_17145 PF03949 Malic enzyme, NAD binding domain BGK55_17150 PF00375 Sodium:dicarboxylate symporter family BGK55_17165 PF00512 His Kinase A (phospho-acceptor) domain BGK55_17165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_17165 PF02743 Cache domain BGK55_17170 PF07690 Major Facilitator Superfamily BGK55_17180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGK55_17180 PF03466 LysR substrate binding domain BGK55_17190 PF00248 Aldo/keto reductase family BGK55_17205 PF00196 Bacterial regulatory proteins, luxR family BGK55_17205 PF00072 Response regulator receiver domain BGK55_17215 PF08521 Two-component sensor kinase N-terminal BGK55_17215 PF00512 His Kinase A (phospho-acceptor) domain BGK55_17215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_17220 PF00486 Transcriptional regulatory protein, C terminal BGK55_17220 PF00072 Response regulator receiver domain BGK55_17230 PF03600 Citrate transporter BGK55_17235 PF00106 short chain dehydrogenase BGK55_17240 PF00356 Bacterial regulatory proteins, lacI family BGK55_17255 PF00128 Alpha amylase, catalytic domain BGK55_17270 PF03193 RsgA GTPase BGK55_17295 PF13276 HTH-like domain BGK55_17295 PF13333 Integrase core domain BGK55_17295 PF00665 Integrase core domain BGK55_17310 PF00664 ABC transporter transmembrane region BGK55_17310 PF00005 ABC transporter BGK55_17310 PF03412 Peptidase C39 family BGK55_17330 PF07715 TonB-dependent Receptor Plug Domain BGK55_17330 PF00593 TonB dependent receptor BGK55_17335 PF01522 Polysaccharide deacetylase BGK55_17340 PF00462 Glutaredoxin BGK55_17355 PF01979 Amidohydrolase family BGK55_17360 PF01979 Amidohydrolase family BGK55_17380 PF02645 Uncharacterised protein, DegV family COG1307 BGK55_17385 PF01327 Polypeptide deformylase BGK55_17390 PF03960 ArsC family BGK55_17410 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) BGK55_17415 PF01270 Glycosyl hydrolases family 8 BGK55_17420 PF03170 Bacterial cellulose synthase subunit BGK55_17425 PF00535 Glycosyl transferase family 2 BGK55_17425 PF07238 PilZ domain BGK55_17425 PF03552 Cellulose synthase BGK55_17440 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BGK55_17440 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BGK55_17480 PF00593 TonB dependent receptor BGK55_17480 PF07715 TonB-dependent Receptor Plug Domain BGK55_17490 PF07702 UTRA domain BGK55_17490 PF00392 Bacterial regulatory proteins, gntR family BGK55_17500 PF00263 Bacterial type II and III secretion system protein BGK55_17500 PF03958 Bacterial type II/III secretion system short domain BGK55_17510 PF10741 Type II secretion system (T2SS), protein M subtype b BGK55_17515 PF05137 Fimbrial assembly protein (PilN) BGK55_17520 PF03934 Type II secretion system (T2SS), protein K BGK55_17530 PF07963 Prokaryotic N-terminal methylation motif BGK55_17535 PF12019 Type II transport protein GspH BGK55_17540 PF08334 Type II secretion system (T2SS), protein G BGK55_17545 PF00482 Type II secretion system (T2SS), protein F BGK55_17550 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BGK55_17550 PF00437 Type II/IV secretion system protein BGK55_17555 PF04151 Bacterial pre-peptidase C-terminal domain BGK55_17555 PF00082 Subtilase family BGK55_17565 PF04151 Bacterial pre-peptidase C-terminal domain BGK55_17565 PF00082 Subtilase family BGK55_17570 PF05662 Coiled stalk of trimeric autotransporter adhesin BGK55_17570 PF05658 Head domain of trimeric autotransporter adhesin BGK55_17570 PF03895 YadA-like membrane anchor domain BGK55_17570 PF13018 Extended Signal Peptide of Type V secretion system BGK55_17575 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal BGK55_17575 PF02769 AIR synthase related protein, C-terminal domain BGK55_17575 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BGK55_17580 PF10411 Disulfide bond isomerase protein N-terminus BGK55_17580 PF13098 Thioredoxin-like domain BGK55_17585 PF02899 Phage integrase, N-terminal SAM-like domain BGK55_17585 PF00589 Phage integrase family BGK55_17600 PF03739 Lipopolysaccharide export system permease LptF/LptG BGK55_17610 PF00883 Cytosol aminopeptidase family, catalytic domain BGK55_17610 PF02789 Cytosol aminopeptidase family, N-terminal domain BGK55_17625 PF10458 Valyl tRNA synthetase tRNA binding arm BGK55_17625 PF08264 Anticodon-binding domain of tRNA BGK55_17625 PF00133 tRNA synthetases class I (I, L, M and V) BGK55_17635 PF01464 Transglycosylase SLT domain BGK55_17635 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain BGK55_17640 PF00544 Pectate lyase BGK55_17655 PF01066 CDP-alcohol phosphatidyltransferase BGK55_17665 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BGK55_17665 PF03129 Anticodon binding domain BGK55_17665 PF04073 Aminoacyl-tRNA editing domain BGK55_17670 PF00816 H-NS histone family BGK55_17680 PF02405 Permease MlaE BGK55_17685 PF00005 ABC transporter BGK55_17690 PF02470 MlaD protein BGK55_17690 PF03886 ABC-type transport auxiliary lipoprotein component BGK55_17710 PF01144 Coenzyme A transferase BGK55_17715 PF01144 Coenzyme A transferase BGK55_17720 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BGK55_17720 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BGK55_17720 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BGK55_17720 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BGK55_17725 PF01050 Mannose-6-phosphate isomerase BGK55_17725 PF00483 Nucleotidyl transferase BGK55_17730 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BGK55_17730 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BGK55_17730 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BGK55_17735 PF04321 RmlD substrate binding domain BGK55_17740 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BGK55_17745 PF00483 Nucleotidyl transferase BGK55_17750 PF16363 GDP-mannose 4,6 dehydratase BGK55_17755 PF01012 Electron transfer flavoprotein domain BGK55_17760 PF01012 Electron transfer flavoprotein domain BGK55_17760 PF00766 Electron transfer flavoprotein FAD-binding domain BGK55_17770 PF00535 Glycosyl transferase family 2 BGK55_17785 PF05050 Methyltransferase FkbM domain BGK55_17800 PF16363 GDP-mannose 4,6 dehydratase BGK55_17805 PF16363 GDP-mannose 4,6 dehydratase BGK55_17810 PF00534 Glycosyl transferases group 1 BGK55_17810 PF13477 Glycosyl transferase 4-like BGK55_17815 PF00069 Protein kinase domain BGK55_17815 PF13847 Methyltransferase domain BGK55_17820 PF00005 ABC transporter BGK55_17830 PF13439 Glycosyltransferase Family 4 BGK55_17830 PF00534 Glycosyl transferases group 1 BGK55_17840 PF01053 Cys/Met metabolism PLP-dependent enzyme BGK55_17845 PF00291 Pyridoxal-phosphate dependent enzyme BGK55_17845 PF00571 CBS domain BGK55_17865 PF00437 Type II/IV secretion system protein BGK55_17870 PF02798 Glutathione S-transferase, N-terminal domain BGK55_17870 PF14497 Glutathione S-transferase, C-terminal domain BGK55_17880 PF00271 Helicase conserved C-terminal domain BGK55_17880 PF00270 DEAD/DEAH box helicase BGK55_17890 PF00593 TonB dependent receptor BGK55_17890 PF07715 TonB-dependent Receptor Plug Domain BGK55_17895 PF01242 6-pyruvoyl tetrahydropterin synthase BGK55_17915 PF13185 GAF domain BGK55_17925 PF00756 Putative esterase BGK55_17930 PF07715 TonB-dependent Receptor Plug Domain BGK55_17930 PF00593 TonB dependent receptor BGK55_17935 PF13419 Haloacid dehalogenase-like hydrolase BGK55_17940 PF00817 impB/mucB/samB family BGK55_17940 PF11799 impB/mucB/samB family C-terminal domain BGK55_17945 PF07977 FabA-like domain BGK55_17950 PF00109 Beta-ketoacyl synthase, N-terminal domain BGK55_17950 PF02801 Beta-ketoacyl synthase, C-terminal domain BGK55_17960 PF01432 Peptidase family M3 BGK55_17975 PF00394 Multicopper oxidase BGK55_17975 PF07731 Multicopper oxidase BGK55_17975 PF07732 Multicopper oxidase BGK55_17980 PF05275 Copper resistance protein B precursor (CopB) BGK55_17985 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BGK55_18010 PF01380 SIS domain BGK55_18015 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BGK55_18020 PF00005 ABC transporter BGK55_18025 PF00005 ABC transporter BGK55_18025 PF02687 FtsX-like permease family BGK55_18025 PF12704 MacB-like periplasmic core domain BGK55_18030 PF02687 FtsX-like permease family BGK55_18030 PF12704 MacB-like periplasmic core domain BGK55_18040 PF00158 Sigma-54 interaction domain BGK55_18040 PF00072 Response regulator receiver domain BGK55_18040 PF02954 Bacterial regulatory protein, Fis family BGK55_18045 PF00512 His Kinase A (phospho-acceptor) domain BGK55_18045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_18050 PF00132 Bacterial transferase hexapeptide (six repeats) BGK55_18050 PF14602 Hexapeptide repeat of succinyl-transferase BGK55_18050 PF12804 MobA-like NTP transferase domain BGK55_18065 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BGK55_18065 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BGK55_18070 PF02874 ATP synthase alpha/beta family, beta-barrel domain BGK55_18070 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BGK55_18075 PF00231 ATP synthase BGK55_18080 PF02874 ATP synthase alpha/beta family, beta-barrel domain BGK55_18080 PF00306 ATP synthase alpha/beta chain, C terminal domain BGK55_18080 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BGK55_18085 PF00213 ATP synthase delta (OSCP) subunit BGK55_18090 PF00430 ATP synthase B/B' CF(0) BGK55_18095 PF00137 ATP synthase subunit C BGK55_18100 PF00119 ATP synthase A chain BGK55_18120 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BGK55_18120 PF07992 Pyridine nucleotide-disulphide oxidoreductase BGK55_18130 PF02817 e3 binding domain BGK55_18130 PF00364 Biotin-requiring enzyme BGK55_18130 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BGK55_18165 PF03180 NLPA lipoprotein BGK55_18170 PF00528 Binding-protein-dependent transport system inner membrane component BGK55_18175 PF09383 NIL domain BGK55_18175 PF00005 ABC transporter BGK55_18180 PF00892 EamA-like transporter family BGK55_18185 PF04461 Protein of unknown function (DUF520) BGK55_18195 PF00512 His Kinase A (phospho-acceptor) domain BGK55_18195 PF01627 Hpt domain BGK55_18195 PF00989 PAS fold BGK55_18195 PF00072 Response regulator receiver domain BGK55_18195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_18195 PF18415 Histidine kinase receptor ArcB trans-membrane domain BGK55_18220 PF13419 Haloacid dehalogenase-like hydrolase BGK55_18225 PF01479 S4 domain BGK55_18225 PF00849 RNA pseudouridylate synthase BGK55_18230 PF05175 Methyltransferase small domain BGK55_18230 PF08468 Methyltransferase small domain N-terminal BGK55_18240 PF07995 Glucose / Sorbosone dehydrogenase BGK55_18250 PF00512 His Kinase A (phospho-acceptor) domain BGK55_18250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_18250 PF00989 PAS fold BGK55_18270 PF00842 Alanine racemase, C-terminal domain BGK55_18270 PF01168 Alanine racemase, N-terminal domain BGK55_18275 PF01266 FAD dependent oxidoreductase BGK55_18280 PF01037 Lrp/AsnC ligand binding domain BGK55_18290 PF01641 SelR domain BGK55_18300 PF01618 MotA/TolQ/ExbB proton channel family BGK55_18305 PF13677 Membrane MotB of proton-channel complex MotA/MotB BGK55_18305 PF00691 OmpA family BGK55_18330 PF01061 ABC-2 type transporter BGK55_18335 PF00005 ABC transporter BGK55_18340 PF00999 Sodium/hydrogen exchanger family BGK55_18345 PF02469 Fasciclin domain BGK55_18350 PF03167 Uracil DNA glycosylase superfamily BGK55_18360 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BGK55_18370 PF03466 LysR substrate binding domain BGK55_18370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGK55_18375 PF03358 NADPH-dependent FMN reductase BGK55_18380 PF00248 Aldo/keto reductase family BGK55_18390 PF05649 Peptidase family M13 BGK55_18390 PF01431 Peptidase family M13 BGK55_18410 PF13520 Amino acid permease BGK55_18420 PF04397 LytTr DNA-binding domain BGK55_18420 PF00072 Response regulator receiver domain BGK55_18425 PF06580 Histidine kinase BGK55_18425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_18425 PF00672 HAMP domain BGK55_18425 PF02743 Cache domain BGK55_18440 PF05974 Domain of unknown function (DUF892) BGK55_18445 PF05067 Manganese containing catalase BGK55_18465 PF01339 CheB methylesterase BGK55_18465 PF01739 CheR methyltransferase, SAM binding domain BGK55_18465 PF03705 CheR methyltransferase, all-alpha domain BGK55_18465 PF08448 PAS fold BGK55_18480 PF00072 Response regulator receiver domain BGK55_18480 PF00158 Sigma-54 interaction domain BGK55_18480 PF02954 Bacterial regulatory protein, Fis family BGK55_18490 PF01654 Cytochrome bd terminal oxidase subunit I BGK55_18495 PF02322 Cytochrome bd terminal oxidase subunit II BGK55_18515 PF16363 GDP-mannose 4,6 dehydratase BGK55_18525 PF03275 UDP-galactopyranose mutase BGK55_18535 PF00664 ABC transporter transmembrane region BGK55_18535 PF00005 ABC transporter BGK55_18550 PF13823 Alcohol dehydrogenase GroES-associated BGK55_18550 PF08240 Alcohol dehydrogenase GroES-like domain BGK55_18550 PF00107 Zinc-binding dehydrogenase BGK55_18595 PF00593 TonB dependent receptor BGK55_18595 PF07715 TonB-dependent Receptor Plug Domain BGK55_18610 PF00005 ABC transporter BGK55_18630 PF03466 LysR substrate binding domain BGK55_18630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGK55_18635 PF02525 Flavodoxin-like fold BGK55_18675 PF00557 Metallopeptidase family M24 BGK55_18700 PF04539 Sigma-70 region 3 BGK55_18700 PF03979 Sigma-70 factor, region 1.1 BGK55_18700 PF04546 Sigma-70, non-essential region BGK55_18700 PF00140 Sigma-70 factor, region 1.2 BGK55_18700 PF04542 Sigma-70 region 2 BGK55_18700 PF04545 Sigma-70, region 4 BGK55_18705 PF02580 D-Tyr-tRNA(Tyr) deacylase BGK55_18710 PF03279 Bacterial lipid A biosynthesis acyltransferase BGK55_18730 PF00925 GTP cyclohydrolase II BGK55_18750 PF00535 Glycosyl transferase family 2 BGK55_18765 PF01029 NusB family BGK55_18765 PF01189 16S rRNA methyltransferase RsmB/F BGK55_18770 PF00551 Formyl transferase BGK55_18770 PF02911 Formyl transferase, C-terminal domain BGK55_18775 PF01327 Polypeptide deformylase BGK55_18780 PF01476 LysM domain BGK55_18785 PF02481 DNA recombination-mediator protein A BGK55_18785 PF17782 DprA winged helix domain BGK55_18790 PF04361 Protein of unknown function (DUF494) BGK55_18795 PF07963 Prokaryotic N-terminal methylation motif BGK55_18795 PF00114 Pilin (bacterial filament) BGK55_18805 PF01131 DNA topoisomerase BGK55_18805 PF01751 Toprim domain BGK55_18805 PF13368 Topoisomerase C-terminal repeat BGK55_18810 PF01300 Telomere recombination BGK55_18840 PF01343 Peptidase family S49 BGK55_18845 PF01554 MatE BGK55_18865 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BGK55_18865 PF00270 DEAD/DEAH box helicase BGK55_18865 PF00271 Helicase conserved C-terminal domain BGK55_18865 PF17764 3′ DNA-binding domain (3′BD) BGK55_18865 PF18074 Primosomal protein N C-terminal domain BGK55_18870 PF00043 Glutathione S-transferase, C-terminal domain BGK55_18870 PF13417 Glutathione S-transferase, N-terminal domain BGK55_18885 PF07992 Pyridine nucleotide-disulphide oxidoreductase BGK55_18890 PF03458 UPF0126 domain BGK55_18895 PF04542 Sigma-70 region 2 BGK55_18895 PF04545 Sigma-70, region 4 BGK55_18900 PF03167 Uracil DNA glycosylase superfamily BGK55_18905 PF01339 CheB methylesterase BGK55_18905 PF00072 Response regulator receiver domain BGK55_18910 PF18075 FtsX extracellular domain BGK55_18915 PF00005 ABC transporter BGK55_18920 PF00270 DEAD/DEAH box helicase BGK55_18920 PF00271 Helicase conserved C-terminal domain BGK55_18920 PF12300 ATP-dependent RNA helicase RhlB BGK55_18925 PF00085 Thioredoxin BGK55_18930 PF07498 Rho termination factor, N-terminal domain BGK55_18930 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BGK55_18930 PF07497 Rho termination factor, RNA-binding domain BGK55_18935 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) BGK55_18940 PF03466 LysR substrate binding domain BGK55_18940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGK55_18950 PF03971 Monomeric isocitrate dehydrogenase BGK55_18960 PF01476 LysM domain BGK55_18960 PF04972 BON domain BGK55_18965 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term BGK55_18965 PF14489 QueF-like protein BGK55_18970 PF01546 Peptidase family M20/M25/M40 BGK55_18970 PF07687 Peptidase dimerisation domain BGK55_18975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BGK55_18980 PF00873 AcrB/AcrD/AcrF family BGK55_18985 PF00873 AcrB/AcrD/AcrF family BGK55_18990 PF07063 Domain of unknown function (DUF1338) BGK55_19030 PF01427 D-ala-D-ala dipeptidase BGK55_19035 PF01510 N-acetylmuramoyl-L-alanine amidase BGK55_19045 PF13378 Enolase C-terminal domain-like BGK55_19045 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BGK55_19055 PF13520 Amino acid permease BGK55_19070 PF05360 yiaA/B two helix domain BGK55_19075 PF07995 Glucose / Sorbosone dehydrogenase BGK55_19080 PF14310 Fibronectin type III-like domain BGK55_19080 PF00933 Glycosyl hydrolase family 3 N terminal domain BGK55_19080 PF01915 Glycosyl hydrolase family 3 C-terminal domain BGK55_19085 PF02152 Dihydroneopterin aldolase BGK55_19090 PF00814 Glycoprotease family BGK55_19095 PF01165 Ribosomal protein S21 BGK55_19100 PF09424 Yqey-like protein BGK55_19105 PF03631 Virulence factor BrkB BGK55_19110 PF08275 DNA primase catalytic core, N-terminal domain BGK55_19110 PF08278 DNA primase DnaG DnaB-binding BGK55_19110 PF01807 CHC2 zinc finger BGK55_19110 PF10410 DnaB-helicase binding domain of primase BGK55_19115 PF13593 SBF-like CPA transporter family (DUF4137) BGK55_19125 PF01040 UbiA prenyltransferase family BGK55_19150 PF00510 Cytochrome c oxidase subunit III BGK55_19155 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 BGK55_19160 PF00115 Cytochrome C and Quinol oxidase polypeptide I BGK55_19165 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BGK55_19165 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BGK55_19175 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BGK55_19175 PF14850 DNA-binding domain of Proline dehydrogenase BGK55_19175 PF01619 Proline dehydrogenase BGK55_19175 PF00171 Aldehyde dehydrogenase family BGK55_19210 PF00579 tRNA synthetases class I (W and Y) BGK55_19215 PF04225 Opacity-associated protein A LysM-like domain BGK55_19215 PF01551 Peptidase family M23 BGK55_19220 PF03702 Anhydro-N-acetylmuramic acid kinase BGK55_19230 PF07690 Major Facilitator Superfamily BGK55_19235 PF03372 Endonuclease/Exonuclease/phosphatase family BGK55_19240 PF00156 Phosphoribosyl transferase domain BGK55_19250 PF13614 AAA domain BGK55_19255 PF02195 ParB-like nuclease domain BGK55_19255 PF17762 HTH domain found in ParB protein BGK55_19265 PF01370 NAD dependent epimerase/dehydratase family BGK55_19270 PF00535 Glycosyl transferase family 2 BGK55_19285 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BGK55_19285 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BGK55_19285 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BGK55_19285 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BGK55_19290 PF00692 dUTPase BGK55_19295 PF04127 DNA / pantothenate metabolism flavoprotein BGK55_19295 PF02441 Flavoprotein BGK55_19300 PF04002 RadC-like JAB domain BGK55_19305 PF03485 Arginyl tRNA synthetase N terminal domain BGK55_19305 PF00750 tRNA synthetases class I (R) BGK55_19305 PF05746 DALR anticodon binding domain BGK55_19320 PF00106 short chain dehydrogenase BGK55_19325 PF01757 Acyltransferase family BGK55_19330 PF03033 Glycosyltransferase family 28 N-terminal domain BGK55_19345 PF17810 Arginine decarboxylase helical bundle domain BGK55_19345 PF17944 Arginine decarboxylase C-terminal helical extension BGK55_19345 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BGK55_19350 PF17284 Spermidine synthase tetramerisation domain BGK55_19375 PF00543 Nitrogen regulatory protein P-II BGK55_19380 PF04380 Membrane fusogenic activity BGK55_19385 PF13335 Magnesium chelatase, subunit ChlI C-terminal BGK55_19385 PF01078 Magnesium chelatase, subunit ChlI BGK55_19400 PF00563 EAL domain BGK55_19400 PF12792 CSS motif domain associated with EAL BGK55_19405 PF00487 Fatty acid desaturase BGK55_19410 PF00970 Oxidoreductase FAD-binding domain BGK55_19410 PF00111 2Fe-2S iron-sulfur cluster binding domain BGK55_19410 PF00175 Oxidoreductase NAD-binding domain BGK55_19415 PF00440 Bacterial regulatory proteins, tetR family BGK55_19435 PF01139 tRNA-splicing ligase RtcB BGK55_19475 PF01370 NAD dependent epimerase/dehydratase family BGK55_19475 PF08338 Domain of unknown function (DUF1731) BGK55_19480 PF00486 Transcriptional regulatory protein, C terminal BGK55_19480 PF00072 Response regulator receiver domain BGK55_19485 PF00512 His Kinase A (phospho-acceptor) domain BGK55_19485 PF08521 Two-component sensor kinase N-terminal BGK55_19485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_19510 PF00595 PDZ domain BGK55_19530 PF01594 AI-2E family transporter BGK55_19535 PF13419 Haloacid dehalogenase-like hydrolase BGK55_19540 PF02789 Cytosol aminopeptidase family, N-terminal domain BGK55_19540 PF00883 Cytosol aminopeptidase family, catalytic domain BGK55_19550 PF04542 Sigma-70 region 2 BGK55_19550 PF08281 Sigma-70, region 4 BGK55_19555 PF00199 Catalase BGK55_19570 PF00196 Bacterial regulatory proteins, luxR family BGK55_19570 PF00072 Response regulator receiver domain BGK55_19575 PF07730 Histidine kinase BGK55_19580 PF13533 Biotin-lipoyl like BGK55_19585 PF00005 ABC transporter BGK55_19605 PF00892 EamA-like transporter family BGK55_19625 PF00753 Metallo-beta-lactamase superfamily BGK55_19630 PF00579 tRNA synthetases class I (W and Y) BGK55_19635 PF05532 CsbD-like BGK55_19650 PF00491 Arginase family BGK55_19675 PF02223 Thymidylate kinase BGK55_19700 PF13333 Integrase core domain BGK55_19700 PF00665 Integrase core domain BGK55_19700 PF13276 HTH-like domain BGK55_19730 PF03309 Type III pantothenate kinase BGK55_19735 PF02237 Biotin protein ligase C terminal domain BGK55_19735 PF08279 HTH domain BGK55_19735 PF03099 Biotin/lipoate A/B protein ligase family BGK55_19775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_19775 PF00672 HAMP domain BGK55_19775 PF00512 His Kinase A (phospho-acceptor) domain BGK55_19780 PF00072 Response regulator receiver domain BGK55_19780 PF00486 Transcriptional regulatory protein, C terminal BGK55_19790 PF01207 Dihydrouridine synthase (Dus) BGK55_19805 PF06628 Catalase-related immune-responsive BGK55_19805 PF00199 Catalase BGK55_19810 PF13307 Helicase C-terminal domain BGK55_19810 PF06733 DEAD_2 BGK55_19825 PF08501 Shikimate dehydrogenase substrate binding domain BGK55_19825 PF01488 Shikimate / quinate 5-dehydrogenase BGK55_19825 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BGK55_19835 PF00667 FAD binding domain BGK55_19835 PF00175 Oxidoreductase NAD-binding domain BGK55_19835 PF00258 Flavodoxin BGK55_19845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGK55_19845 PF03466 LysR substrate binding domain BGK55_19860 PF00490 Delta-aminolevulinic acid dehydratase BGK55_19885 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region BGK55_19885 PF00326 Prolyl oligopeptidase family BGK55_19890 PF02798 Glutathione S-transferase, N-terminal domain BGK55_19890 PF00043 Glutathione S-transferase, C-terminal domain BGK55_19915 PF04820 Tryptophan halogenase BGK55_19930 PF00005 ABC transporter BGK55_19940 PF01381 Helix-turn-helix BGK55_19950 PF01229 Glycosyl hydrolases family 39 BGK55_19955 PF02583 Metal-sensitive transcriptional repressor BGK55_19960 PF01545 Cation efflux family BGK55_19960 PF16916 Dimerisation domain of Zinc Transporter BGK55_19970 PF07715 TonB-dependent Receptor Plug Domain BGK55_19970 PF00593 TonB dependent receptor BGK55_19980 PF12833 Helix-turn-helix domain BGK55_19980 PF01965 DJ-1/PfpI family BGK55_19985 PF00175 Oxidoreductase NAD-binding domain BGK55_19985 PF00970 Oxidoreductase FAD-binding domain BGK55_19985 PF00111 2Fe-2S iron-sulfur cluster binding domain BGK55_19990 PF00005 ABC transporter BGK55_19995 PF01061 ABC-2 type transporter BGK55_20005 PF08546 Ketopantoate reductase PanE/ApbA C terminal BGK55_20005 PF02558 Ketopantoate reductase PanE/ApbA BGK55_20035 PF00268 Ribonucleotide reductase, small chain BGK55_20040 PF00317 Ribonucleotide reductase, all-alpha domain BGK55_20040 PF03477 ATP cone domain BGK55_20040 PF02867 Ribonucleotide reductase, barrel domain BGK55_20050 PF00583 Acetyltransferase (GNAT) family BGK55_20050 PF13380 CoA binding domain BGK55_20050 PF13607 Succinyl-CoA ligase like flavodoxin domain BGK55_20055 PF00571 CBS domain BGK55_20055 PF03448 MgtE intracellular N domain BGK55_20055 PF01769 Divalent cation transporter BGK55_20060 PF00194 Eukaryotic-type carbonic anhydrase BGK55_20065 PF00999 Sodium/hydrogen exchanger family BGK55_20065 PF02254 TrkA-N domain BGK55_20070 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BGK55_20070 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BGK55_20075 PF00723 Glycosyl hydrolases family 15 BGK55_20090 PF05166 YcgL domain BGK55_20095 PF00109 Beta-ketoacyl synthase, N-terminal domain BGK55_20095 PF02801 Beta-ketoacyl synthase, C-terminal domain BGK55_20105 PF00535 Glycosyl transferase family 2 BGK55_20165 PF07977 FabA-like domain BGK55_20170 PF01553 Acyltransferase BGK55_20180 PF00550 Phosphopantetheine attachment site BGK55_20185 PF04820 Tryptophan halogenase BGK55_20205 PF07676 WD40-like Beta Propeller Repeat BGK55_20205 PF00326 Prolyl oligopeptidase family BGK55_20220 PF01218 Coproporphyrinogen III oxidase BGK55_20230 PF01367 5'-3' exonuclease, C-terminal SAM fold BGK55_20230 PF01612 3'-5' exonuclease BGK55_20230 PF00476 DNA polymerase family A BGK55_20230 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BGK55_20300 PF04717 Type VI secretion system, phage-baseplate injector BGK55_20325 PF08281 Sigma-70, region 4 BGK55_20325 PF04542 Sigma-70 region 2 BGK55_20340 PF00328 Histidine phosphatase superfamily (branch 2) BGK55_20370 PF10431 C-terminal, D2-small domain, of ClpB protein BGK55_20370 PF17871 AAA lid domain BGK55_20370 PF07724 AAA domain (Cdc48 subfamily) BGK55_20370 PF00004 ATPase family associated with various cellular activities (AAA) BGK55_20420 PF12464 Maltose acetyltransferase BGK55_20420 PF14602 Hexapeptide repeat of succinyl-transferase BGK55_20430 PF13361 UvrD-like helicase C-terminal domain BGK55_20430 PF00580 UvrD/REP helicase N-terminal domain BGK55_20445 PF13091 PLD-like domain BGK55_20445 PF13396 Phospholipase_D-nuclease N-terminal BGK55_20455 PF03737 Aldolase/RraA BGK55_20460 PF04303 PrpF protein BGK55_20465 PF04909 Amidohydrolase BGK55_20470 PF00471 Ribosomal protein L33 BGK55_20475 PF00830 Ribosomal L28 family BGK55_20480 PF00873 AcrB/AcrD/AcrF family BGK55_20490 PF13533 Biotin-lipoyl like BGK55_20510 PF02527 rRNA small subunit methyltransferase G BGK55_20515 PF09423 PhoD-like phosphatase BGK55_20515 PF16655 PhoD-like phosphatase, N-terminal domain BGK55_20520 PF09423 PhoD-like phosphatase BGK55_20520 PF16655 PhoD-like phosphatase, N-terminal domain BGK55_20525 PF01648 4'-phosphopantetheinyl transferase superfamily BGK55_20535 PF04226 Transglycosylase associated protein BGK55_20545 PF03372 Endonuclease/Exonuclease/phosphatase family BGK55_20550 PF00480 ROK family BGK55_20560 PF09312 SurA N-terminal domain BGK55_20560 PF00639 PPIC-type PPIASE domain BGK55_20570 PF00474 Sodium:solute symporter family BGK55_20575 PF04341 Protein of unknown function, DUF485 BGK55_20585 PF13193 AMP-binding enzyme C-terminal domain BGK55_20585 PF16177 Acetyl-coenzyme A synthetase N-terminus BGK55_20585 PF00501 AMP-binding enzyme BGK55_20590 PF00196 Bacterial regulatory proteins, luxR family BGK55_20590 PF00072 Response regulator receiver domain BGK55_20615 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BGK55_20615 PF04616 Glycosyl hydrolases family 43 BGK55_20625 PF00248 Aldo/keto reductase family BGK55_20640 PF01557 Fumarylacetoacetate (FAA) hydrolase family BGK55_20645 PF13378 Enolase C-terminal domain-like BGK55_20645 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BGK55_20650 PF05336 L-rhamnose mutarotase BGK55_20655 PF07690 Major Facilitator Superfamily BGK55_20660 PF09339 IclR helix-turn-helix domain BGK55_20660 PF01614 Bacterial transcriptional regulator BGK55_20670 PF02659 Putative manganese efflux pump BGK55_20675 PF00512 His Kinase A (phospho-acceptor) domain BGK55_20675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_20685 PF06165 Glycosyltransferase family 36 BGK55_20685 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain BGK55_20700 PF13360 PQQ-like domain BGK55_20700 PF01011 PQQ enzyme repeat BGK55_20700 PF13570 PQQ-like domain BGK55_20730 PF04357 TamB, inner membrane protein subunit of TAM complex BGK55_20735 PF17243 POTRA domain TamA domain 1 BGK55_20735 PF01103 Surface antigen BGK55_20740 PF07715 TonB-dependent Receptor Plug Domain BGK55_20740 PF00593 TonB dependent receptor BGK55_20745 PF13181 Tetratricopeptide repeat BGK55_20750 PF02092 Glycyl-tRNA synthetase beta subunit BGK55_20750 PF05746 DALR anticodon binding domain BGK55_20755 PF02091 Glycyl-tRNA synthetase alpha subunit BGK55_20760 PF00437 Type II/IV secretion system protein BGK55_20760 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BGK55_20770 PF00117 Glutamine amidotransferase class-I BGK55_20770 PF00958 GMP synthase C terminal domain BGK55_20780 PF00902 Sec-independent protein translocase protein (TatC) BGK55_20785 PF02416 mttA/Hcf106 family BGK55_20790 PF02416 mttA/Hcf106 family BGK55_20800 PF00762 Ferrochelatase BGK55_20805 PF12697 Alpha/beta hydrolase family BGK55_20820 PF04381 Putative exonuclease, RdgC BGK55_20825 PF01171 PP-loop family BGK55_20835 PF00356 Bacterial regulatory proteins, lacI family BGK55_20840 PF03648 Glycosyl hydrolase family 67 N-terminus BGK55_20840 PF07488 Glycosyl hydrolase family 67 middle domain BGK55_20840 PF07477 Glycosyl hydrolase family 67 C-terminus BGK55_20850 PF13378 Enolase C-terminal domain-like BGK55_20850 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BGK55_20855 PF04616 Glycosyl hydrolases family 43 BGK55_20855 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BGK55_20860 PF00933 Glycosyl hydrolase family 3 N terminal domain BGK55_20860 PF01915 Glycosyl hydrolase family 3 C-terminal domain BGK55_20860 PF07691 PA14 domain BGK55_20860 PF14310 Fibronectin type III-like domain BGK55_20865 PF01232 Mannitol dehydrogenase Rossmann domain BGK55_20865 PF08125 Mannitol dehydrogenase C-terminal domain BGK55_20890 PF00171 Aldehyde dehydrogenase family BGK55_20905 PF00202 Aminotransferase class-III BGK55_20915 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BGK55_20915 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BGK55_20930 PF08450 SMP-30/Gluconolactonase/LRE-like region BGK55_20935 PF00331 Glycosyl hydrolase family 10 BGK55_20940 PF02837 Glycosyl hydrolases family 2, sugar binding domain BGK55_20940 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BGK55_20940 PF00703 Glycosyl hydrolases family 2 BGK55_20940 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 BGK55_20940 PF16355 Domain of unknown function (DUF4982) BGK55_20945 PF02614 Glucuronate isomerase BGK55_20960 PF00553 Cellulose binding domain BGK55_20960 PF00331 Glycosyl hydrolase family 10 BGK55_20960 PF03422 Carbohydrate binding module (family 6) BGK55_20980 PF04616 Glycosyl hydrolases family 43 BGK55_21010 PF04349 Periplasmic glucan biosynthesis protein, MdoG BGK55_21015 PF00360 Phytochrome region BGK55_21015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGK55_21015 PF00512 His Kinase A (phospho-acceptor) domain BGK55_21015 PF01590 GAF domain BGK55_21015 PF08446 PAS fold BGK55_21020 PF00265 Thymidine kinase BGK55_21025 PF00580 UvrD/REP helicase N-terminal domain BGK55_21025 PF13361 UvrD-like helicase C-terminal domain BGK55_21030 PF13302 Acetyltransferase (GNAT) domain BGK55_21040 PF04337 Protein of unknown function, DUF480 BGK55_21045 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) BGK55_21050 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BGK55_21055 PF04820 Tryptophan halogenase BGK55_21075 PF00356 Bacterial regulatory proteins, lacI family BGK55_21085 PF01553 Acyltransferase BGK55_21090 PF08240 Alcohol dehydrogenase GroES-like domain BGK55_21090 PF00698 Acyl transferase domain BGK55_21090 PF14765 Polyketide synthase dehydratase BGK55_21090 PF08659 KR domain BGK55_21090 PF02801 Beta-ketoacyl synthase, C-terminal domain BGK55_21090 PF00107 Zinc-binding dehydrogenase BGK55_21090 PF16197 Ketoacyl-synthetase C-terminal extension BGK55_21090 PF00109 Beta-ketoacyl synthase, N-terminal domain BGK55_21090 PF00550 Phosphopantetheine attachment site BGK55_21105 PF06827 Zinc finger found in FPG and IleRS BGK55_21105 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BGK55_21105 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BGK55_21135 PF03594 Benzoate membrane transport protein BGK55_21140 PF08446 PAS fold BGK55_21140 PF13426 PAS domain BGK55_21140 PF00360 Phytochrome region BGK55_21140 PF01590 GAF domain BGK55_21145 PF01126 Heme oxygenase BGK55_21150 PF07690 Major Facilitator Superfamily BGK55_21155 PF01263 Aldose 1-epimerase BGK55_21165 PF02810 SEC-C motif BGK55_21170 PF01925 Sulfite exporter TauE/SafE BGK55_21190 PF01227 GTP cyclohydrolase I BGK55_21200 PF07869 Protein of unknown function (DUF1656) BGK55_21205 PF00529 HlyD membrane-fusion protein of T1SS BGK55_21205 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BGK55_21210 PF02321 Outer membrane efflux protein BGK55_21215 PF04632 Fusaric acid resistance protein family BGK55_21220 PF00083 Sugar (and other) transporter BGK55_21225 PF13091 PLD-like domain BGK55_21225 PF13396 Phospholipase_D-nuclease N-terminal BGK55_21250 PF01850 PIN domain BGK55_21285 PF13538 UvrD-like helicase C-terminal domain BGK55_21290 PF12705 PD-(D/E)XK nuclease superfamily BGK55_21290 PF00580 UvrD/REP helicase N-terminal domain BGK55_21290 PF13361 UvrD-like helicase C-terminal domain BGK55_21295 PF17946 RecC C-terminal domain BGK55_21310 PF00005 ABC transporter BGK55_21315 PF02405 Permease MlaE BGK55_21320 PF02470 MlaD protein BGK55_21325 PF05494 MlaC protein BGK55_21335 PF04333 MlaA lipoprotein BGK55_21345 PF00255 Glutathione peroxidase BGK55_21355 PF02646 RmuC family BGK55_21360 PF08240 Alcohol dehydrogenase GroES-like domain BGK55_21360 PF00107 Zinc-binding dehydrogenase BGK55_21365 PF03466 LysR substrate binding domain BGK55_21365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGK55_21375 PF00043 Glutathione S-transferase, C-terminal domain BGK55_21375 PF13417 Glutathione S-transferase, N-terminal domain BGK55_21385 PF13520 Amino acid permease BGK55_21395 PF10947 Protein of unknown function (DUF2628) BGK55_21400 PF00990 Diguanylate cyclase, GGDEF domain BGK55_21420 PF10672 S-adenosylmethionine-dependent methyltransferase BGK55_21420 PF17785 PUA-like domain BGK55_21425 PF03741 Integral membrane protein TerC family BGK55_21430 PF01694 Rhomboid family BGK55_21435 PF03009 Glycerophosphoryl diester phosphodiesterase family BGK55_21445 PF01569 PAP2 superfamily BGK55_21450 PF10396 GTP-binding protein TrmE N-terminus BGK55_21450 PF12631 MnmE helical domain BGK55_21450 PF01926 50S ribosome-binding GTPase BGK55_21455 PF01522 Polysaccharide deacetylase BGK55_21460 PF02096 60Kd inner membrane protein BGK55_21460 PF14849 YidC periplasmic domain BGK55_21465 PF00825 Ribonuclease P BGK55_21470 PF00468 Ribosomal protein L34 BGK55_21475 PF01526 Tn3 transposase DDE domain BGK55_21475 PF13700 Domain of unknown function (DUF4158) BGK55_21480 PF02810 SEC-C motif BGK55_21480 PF03695 Uncharacterised protein family (UPF0149) BGK55_21495 PF03377 TAL effector repeat BGK55_21535 PF03377 TAL effector repeat BGK55_21555 PF03377 TAL effector repeat BGK55_21575 PF00239 Resolvase, N terminal domain BGK55_21575 PF02796 Helix-turn-helix domain of resolvase BGK55_21595 PF13614 AAA domain BGK55_21595 PF00376 MerR family regulatory protein BGK55_21605 PF03377 TAL effector repeat BGK55_21625 PF07015 VirC1 protein BGK55_21635 PF02796 Helix-turn-helix domain of resolvase BGK55_21635 PF00239 Resolvase, N terminal domain BGK55_21640 PF09386 Antitoxin ParD BGK55_21645 PF05016 ParE toxin of type II toxin-antitoxin system, parDE BGK55_21650 PF03377 TAL effector repeat BGK55_21655 PF01527 Transposase BGK55_21660 PF13276 HTH-like domain BGK55_21660 PF13683 Integrase core domain BGK55_21665 PF00239 Resolvase, N terminal domain BGK55_21665 PF02796 Helix-turn-helix domain of resolvase BGK55_21680 PF13333 Integrase core domain BGK55_21680 PF13276 HTH-like domain BGK55_21680 PF00665 Integrase core domain BGK55_21730 PF02796 Helix-turn-helix domain of resolvase BGK55_21730 PF00239 Resolvase, N terminal domain BGK55_21765 PF03421 YopJ Serine/Threonine acetyltransferase BGK55_21785 PF03695 Uncharacterised protein family (UPF0149) BGK55_21785 PF02810 SEC-C motif BGK55_21790 PF13700 Domain of unknown function (DUF4158) BGK55_21790 PF01526 Tn3 transposase DDE domain BGK55_21805 PF00239 Resolvase, N terminal domain BGK55_21805 PF02796 Helix-turn-helix domain of resolvase BGK55_21810 PF02796 Helix-turn-helix domain of resolvase BGK55_21810 PF00239 Resolvase, N terminal domain BGK55_21815 PF03377 TAL effector repeat BGK55_21820 PF03377 TAL effector repeat BGK55_21840 PF07015 VirC1 protein BGK55_21870 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BGK55_21895 PF18272 single-stranded DNA binding TraI N-terminal subdomain BGK55_21895 PF07057 DNA helicase TraI BGK55_21895 PF08751 TrwC relaxase BGK55_21895 PF18340 DNA relaxase TraI 2B/2B-like domain BGK55_21915 PF03377 TAL effector repeat BGK55_21920 PF13276 HTH-like domain BGK55_21920 PF13333 Integrase core domain BGK55_21920 PF00665 Integrase core domain BGK55_21930 PF13406 Transglycosylase SLT domain BGK55_21955 PF03695 Uncharacterised protein family (UPF0149) BGK55_21955 PF02810 SEC-C motif BGK55_21960 PF01526 Tn3 transposase DDE domain BGK55_21960 PF13700 Domain of unknown function (DUF4158) BGK55_21975 PF00239 Resolvase, N terminal domain BGK55_21975 PF02796 Helix-turn-helix domain of resolvase BGK55_21990 PF13614 AAA domain BGK55_22020 PF03389 MobA/MobL family