BGK55_00005 SM00382 ATPases associated with a variety of cellular activities BGK55_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain BGK55_00010 SM00480 DNA polymerase III beta subunit BGK55_00020 SM00387 Histidine kinase-like ATPases BGK55_00020 SM00433 TopoisomeraseII BGK55_00035 SM00028 Tetratricopeptide repeats BGK55_00070 SM00155 Phospholipase D. Active site motifs. BGK55_00085 SM00729 Elongator protein 3, MiaB family, Radical SAM BGK55_00115 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BGK55_00115 SM00245 tail specific protease BGK55_00160 SM00829 Enoylreductase BGK55_00285 SM00382 ATPases associated with a variety of cellular activities BGK55_00405 SM00487 DEAD-like helicases superfamily BGK55_00405 SM00490 helicase superfamily c-terminal domain BGK55_00430 SM00822 BGK55_00430 BGK55_00435 SM00822 BGK55_00435 BGK55_00675 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen BGK55_00695 SM00421 helix_turn_helix, Lux Regulon BGK55_00695 SM00448 cheY-homologous receiver domain BGK55_00715 SM00862 Transcriptional regulatory protein, C terminal BGK55_00765 SM00347 helix_turn_helix multiple antibiotic resistance protein BGK55_00770 SM00642 Alpha-amylase domain BGK55_00775 SM00642 Alpha-amylase domain BGK55_00780 SM00642 Alpha-amylase domain BGK55_00830 SM00354 helix_turn _helix lactose operon repressor BGK55_00870 SM00344 helix_turn_helix ASNC type BGK55_00890 SM00382 ATPases associated with a variety of cellular activities BGK55_00905 SM00382 ATPases associated with a variety of cellular activities BGK55_00940 SM00530 Helix-turn-helix XRE-family like proteins BGK55_00970 SM00855 Phosphoglycerate mutase family BGK55_00975 SM00867 YceI-like domain BGK55_00980 SM00155 Phospholipase D. Active site motifs. BGK55_00990 SM00563 Phosphate acyltransferases BGK55_01005 SM00028 Tetratricopeptide repeats BGK55_01025 SM01230 BGK55_01025 BGK55_01030 SM00938 Nitrogen regulatory protein P-II BGK55_01040 SM00387 Histidine kinase-like ATPases BGK55_01040 SM00388 His Kinase A (phosphoacceptor) domain BGK55_01045 SM00382 ATPases associated with a variety of cellular activities BGK55_01045 SM00448 cheY-homologous receiver domain BGK55_01105 SM00450 Rhodanese Homology Domain BGK55_01135 SM00387 Histidine kinase-like ATPases BGK55_01135 SM00388 His Kinase A (phosphoacceptor) domain BGK55_01140 SM00382 ATPases associated with a variety of cellular activities BGK55_01140 SM00448 cheY-homologous receiver domain BGK55_01255 SM00563 Phosphate acyltransferases BGK55_01290 SM00342 helix_turn_helix, arabinose operon control protein BGK55_01315 SM00100 Cyclic nucleotide-monophosphate binding domain BGK55_01315 SM00267 diguanylate cyclase BGK55_01340 SM00878 Biotin carboxylase C-terminal domain BGK55_01365 SM00953 BGK55_01365 BGK55_01440 SM00347 helix_turn_helix multiple antibiotic resistance protein BGK55_01475 SM00829 Enoylreductase BGK55_01505 SM00487 DEAD-like helicases superfamily BGK55_01505 SM00490 helicase superfamily c-terminal domain BGK55_01505 SM00847 Helicase associated domain (HA2) Add an annotation BGK55_01630 SM00422 helix_turn_helix, mercury resistance BGK55_01665 SM00448 cheY-homologous receiver domain BGK55_01665 SM00862 Transcriptional regulatory protein, C terminal BGK55_01670 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BGK55_01670 SM00387 Histidine kinase-like ATPases BGK55_01670 SM00388 His Kinase A (phosphoacceptor) domain BGK55_01830 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BGK55_01835 SM00347 helix_turn_helix multiple antibiotic resistance protein BGK55_01855 SM00342 helix_turn_helix, arabinose operon control protein BGK55_01885 SM00420 helix_turn_helix, Deoxyribose operon repressor BGK55_01885 SM01134 BGK55_01885 BGK55_01900 SM00882 Coenzyme A transferase BGK55_01905 SM00882 Coenzyme A transferase BGK55_01930 SM00998 Adenylosuccinate lyase C-terminus BGK55_01950 SM00346 helix_turn_helix isocitrate lyase regulation BGK55_01955 SM00090 RIO-like kinase BGK55_01970 SM01228 BGK55_01970 BGK55_02025 SM00729 Elongator protein 3, MiaB family, Radical SAM BGK55_02025 SM00876 Biotin and Thiamin Synthesis associated domain BGK55_02135 SM00382 ATPases associated with a variety of cellular activities BGK55_02200 SM00267 diguanylate cyclase BGK55_02210 SM00642 Alpha-amylase domain BGK55_02215 SM00642 Alpha-amylase domain BGK55_02225 SM00642 Alpha-amylase domain BGK55_02235 SM00642 Alpha-amylase domain BGK55_02285 SM00822 BGK55_02285 BGK55_02295 SM00487 DEAD-like helicases superfamily BGK55_02295 SM00490 helicase superfamily c-terminal domain BGK55_02305 SM00326 Src homology 3 domains BGK55_02310 SM00861 Transketolase, pyrimidine binding domain BGK55_02340 SM00347 helix_turn_helix multiple antibiotic resistance protein BGK55_02435 SM00271 DnaJ molecular chaperone homology domain BGK55_02485 SM00493 BGK55_02485 BGK55_02545 SM00046 Diacylglycerol kinase catalytic domain (presumed) BGK55_02565 SM00903 Flavin reductase like domain BGK55_02590 SM00100 Cyclic nucleotide-monophosphate binding domain BGK55_02590 SM00419 helix_turn_helix, cAMP Regulatory protein BGK55_02645 SM00387 Histidine kinase-like ATPases BGK55_02645 SM00388 His Kinase A (phosphoacceptor) domain BGK55_02645 SM00448 cheY-homologous receiver domain BGK55_02650 SM00052 Putative diguanylate phosphodiesterase BGK55_02650 SM00267 diguanylate cyclase BGK55_02650 SM00448 cheY-homologous receiver domain BGK55_02705 SM00563 Phosphate acyltransferases BGK55_02730 SM01209 BGK55_02730 BGK55_02730 SM01210 BGK55_02730 BGK55_02740 SM00798 AICARFT/IMPCHase bienzyme BGK55_02740 SM00851 MGS-like domain BGK55_02755 SM00195 Dual specificity phosphatase, catalytic domain BGK55_02775 SM00563 Phosphate acyltransferases BGK55_02800 SM00530 Helix-turn-helix XRE-family like proteins BGK55_02825 SM00878 Biotin carboxylase C-terminal domain BGK55_02855 SM00342 helix_turn_helix, arabinose operon control protein BGK55_02865 SM00234 in StAR and phosphatidylcholine transfer protein BGK55_02890 SM00883 Chaperonin 10 Kd subunit BGK55_02950 SM00944 Pro-kumamolisin, activation domain BGK55_02965 SM00867 YceI-like domain BGK55_03020 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BGK55_03030 SM00345 helix_turn_helix gluconate operon transcriptional repressor BGK55_03030 SM00895 BGK55_03030 BGK55_03050 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BGK55_03050 SM00331 Sigma factor PP2C-like phosphatases BGK55_03095 SM00342 helix_turn_helix, arabinose operon control protein BGK55_03155 SM00267 diguanylate cyclase BGK55_03180 SM00062 Bacterial periplasmic substrate-binding proteins BGK55_03240 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BGK55_03250 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BGK55_03250 SM00091 PAS domain BGK55_03250 SM00267 diguanylate cyclase BGK55_03255 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BGK55_03255 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BGK55_03255 SM01049 BGK55_03255 BGK55_03260 SM00637 BGK55_03260 BGK55_03270 SM00267 diguanylate cyclase BGK55_03300 SM00448 cheY-homologous receiver domain BGK55_03300 SM00850 LytTr DNA-binding domain BGK55_03380 SM00382 ATPases associated with a variety of cellular activities BGK55_03380 SM01086 C-terminal, D2-small domain, of ClpB protein BGK55_03410 SM00267 diguanylate cyclase BGK55_03415 SM01263 BGK55_03415 BGK55_03435 SM00564 beta-propeller repeat BGK55_03440 SM00062 Bacterial periplasmic substrate-binding proteins BGK55_03440 SM00248 ankyrin repeats BGK55_03455 SM00829 Enoylreductase BGK55_03465 SM00382 ATPases associated with a variety of cellular activities BGK55_03475 SM00268 Actin BGK55_03500 SM00710 Parallel beta-helix repeats BGK55_03520 SM00936 Penicillin-binding protein 5, C-terminal domain BGK55_03540 SM00729 Elongator protein 3, MiaB family, Radical SAM BGK55_03545 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BGK55_03545 SM00245 tail specific protease BGK55_03600 SM01350 BGK55_03600 BGK55_03610 SM00749 bacterial OsmY and nodulation domain BGK55_03615 SM00387 Histidine kinase-like ATPases BGK55_03615 SM00388 His Kinase A (phosphoacceptor) domain BGK55_03620 SM00448 cheY-homologous receiver domain BGK55_03625 SM00387 Histidine kinase-like ATPases BGK55_03625 SM00388 His Kinase A (phosphoacceptor) domain BGK55_03625 SM00448 cheY-homologous receiver domain BGK55_03680 SM00382 ATPases associated with a variety of cellular activities BGK55_03750 SM00345 helix_turn_helix gluconate operon transcriptional repressor BGK55_03750 SM00866 BGK55_03750 BGK55_03760 SM00354 helix_turn _helix lactose operon repressor BGK55_03830 SM00849 Metallo-beta-lactamase superfamily BGK55_03835 SM00342 helix_turn_helix, arabinose operon control protein BGK55_03845 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BGK55_03845 SM00387 Histidine kinase-like ATPases BGK55_03845 SM00388 His Kinase A (phosphoacceptor) domain BGK55_03850 SM00448 cheY-homologous receiver domain BGK55_03850 SM00862 Transcriptional regulatory protein, C terminal BGK55_03870 SM00829 Enoylreductase BGK55_03890 SM00345 helix_turn_helix gluconate operon transcriptional repressor BGK55_03910 SM00382 ATPases associated with a variety of cellular activities BGK55_04000 SM00387 Histidine kinase-like ATPases BGK55_04000 SM00388 His Kinase A (phosphoacceptor) domain BGK55_04005 SM00448 cheY-homologous receiver domain BGK55_04005 SM00862 Transcriptional regulatory protein, C terminal BGK55_04120 SM00842 Cell division protein FtsA BGK55_04125 SM00864 Tubulin/FtsZ family, GTPase domain BGK55_04125 SM00865 Tubulin/FtsZ family, C-terminal domain BGK55_04145 SM00957 SecA DEAD-like domain BGK55_04145 SM00958 SecA preprotein cross-linking domain BGK55_04170 SM00829 Enoylreductase BGK55_04175 SM00944 Pro-kumamolisin, activation domain BGK55_04195 SM00642 Alpha-amylase domain BGK55_04225 SM00996 S-adenosyl-L-homocysteine hydrolase BGK55_04225 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BGK55_04340 SM00382 ATPases associated with a variety of cellular activities BGK55_04360 SM00382 ATPases associated with a variety of cellular activities BGK55_04370 SM00448 cheY-homologous receiver domain BGK55_04370 SM00862 Transcriptional regulatory protein, C terminal BGK55_04375 SM00387 Histidine kinase-like ATPases BGK55_04375 SM00388 His Kinase A (phosphoacceptor) domain BGK55_04430 SM00382 ATPases associated with a variety of cellular activities BGK55_04440 SM00382 ATPases associated with a variety of cellular activities BGK55_04515 SM00650 Ribosomal RNA adenine dimethylases BGK55_04590 SM00345 helix_turn_helix gluconate operon transcriptional repressor BGK55_04590 SM00895 BGK55_04590 BGK55_04625 SM00347 helix_turn_helix multiple antibiotic resistance protein BGK55_04710 SM00448 cheY-homologous receiver domain BGK55_04715 SM00387 Histidine kinase-like ATPases BGK55_04715 SM00388 His Kinase A (phosphoacceptor) domain BGK55_04715 SM00448 cheY-homologous receiver domain BGK55_04720 SM00421 helix_turn_helix, Lux Regulon BGK55_04785 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BGK55_04785 SM00475 5'-3' exonuclease BGK55_04815 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BGK55_04815 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BGK55_04925 SM00852 Probable molybdopterin binding domain BGK55_04930 SM00028 Tetratricopeptide repeats BGK55_04935 SM00937 BGK55_04935 BGK55_04945 SM00028 Tetratricopeptide repeats BGK55_04965 SM01400 BGK55_04965 BGK55_05015 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BGK55_05015 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BGK55_05020 SM00649 Ribosomal protein L11/L12 BGK55_05045 SM00663 RNA polymerase I subunit A N-terminus BGK55_05060 SM00838 Elongation factor G C-terminus BGK55_05060 SM00889 Elongation factor G, domain IV BGK55_05070 SM01403 BGK55_05070 BGK55_05090 SM01382 BGK55_05090 BGK55_05090 SM01383 BGK55_05090 BGK55_05105 SM00322 K homology RNA-binding domain BGK55_05125 SM01374 BGK55_05125 BGK55_05130 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BGK55_05190 SM00363 S4 RNA-binding domain BGK55_05190 SM01390 BGK55_05190 BGK55_05195 SM00662 RNA polymerases D BGK55_05240 SM00838 Elongation factor G C-terminus BGK55_05280 SM00829 Enoylreductase BGK55_05325 SM00382 ATPases associated with a variety of cellular activities BGK55_05335 SM00829 Enoylreductase BGK55_05365 SM00855 Phosphoglycerate mutase family BGK55_05415 SM00014 Acid phosphatase homologues BGK55_05435 SM00091 PAS domain BGK55_05435 SM00387 Histidine kinase-like ATPases BGK55_05435 SM00388 His Kinase A (phosphoacceptor) domain BGK55_05440 SM00448 cheY-homologous receiver domain BGK55_05440 SM00862 Transcriptional regulatory protein, C terminal BGK55_05460 SM01329 BGK55_05460 BGK55_05590 SM00642 Alpha-amylase domain BGK55_05605 SM00862 Transcriptional regulatory protein, C terminal BGK55_05610 SM00387 Histidine kinase-like ATPases BGK55_05610 SM00388 His Kinase A (phosphoacceptor) domain BGK55_05695 SM00382 ATPases associated with a variety of cellular activities BGK55_05695 SM00448 cheY-homologous receiver domain BGK55_05700 SM00387 Histidine kinase-like ATPases BGK55_05700 SM00388 His Kinase A (phosphoacceptor) domain BGK55_05710 SM00881 CoA binding domain BGK55_05760 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BGK55_05765 SM00564 beta-propeller repeat BGK55_05860 SM00382 ATPases associated with a variety of cellular activities BGK55_05865 SM00382 ATPases associated with a variety of cellular activities BGK55_05865 SM01086 C-terminal, D2-small domain, of ClpB protein BGK55_05915 SM00855 Phosphoglycerate mutase family BGK55_06015 SM00382 ATPases associated with a variety of cellular activities BGK55_06055 SM00834 Putative regulatory protein BGK55_06090 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BGK55_06105 SM00382 ATPases associated with a variety of cellular activities BGK55_06160 SM00091 PAS domain BGK55_06160 SM00911 HWE histidine kinase BGK55_06165 SM00448 cheY-homologous receiver domain BGK55_06180 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BGK55_06180 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BGK55_06200 SM00448 cheY-homologous receiver domain BGK55_06210 SM00341 Helicase and RNase D C-terminal BGK55_06210 SM00487 DEAD-like helicases superfamily BGK55_06210 SM00490 helicase superfamily c-terminal domain BGK55_06210 SM00956 BGK55_06210 BGK55_06220 SM00382 ATPases associated with a variety of cellular activities BGK55_06220 SM00487 DEAD-like helicases superfamily BGK55_06220 SM00490 helicase superfamily c-terminal domain BGK55_06220 SM00847 Helicase associated domain (HA2) Add an annotation BGK55_06270 SM00954 Region found in RelA / SpoT proteins BGK55_06295 SM00491 BGK55_06295 BGK55_06320 SM00448 cheY-homologous receiver domain BGK55_06325 SM00448 cheY-homologous receiver domain BGK55_06330 SM00260 Two component signalling adaptor domain BGK55_06335 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BGK55_06340 SM00073 Histidine Phosphotransfer domain BGK55_06340 SM00260 Two component signalling adaptor domain BGK55_06340 SM00387 Histidine kinase-like ATPases BGK55_06340 SM00448 cheY-homologous receiver domain BGK55_06340 SM01231 BGK55_06340 BGK55_06350 SM00260 Two component signalling adaptor domain BGK55_06375 SM00369 Leucine-rich repeats, typical (most populated) subfamily BGK55_06410 SM01149 BGK55_06410 BGK55_06430 SM00758 BGK55_06430 BGK55_06430 SM01217 BGK55_06430 BGK55_06445 SM00636 BGK55_06445 BGK55_06450 SM00812 Alpha-L-fucosidase BGK55_06585 SM00116 Domain in cystathionine beta-synthase and other proteins. BGK55_06640 SM00867 YceI-like domain BGK55_06650 SM00867 YceI-like domain BGK55_06655 SM00387 Histidine kinase-like ATPases BGK55_06655 SM00388 His Kinase A (phosphoacceptor) domain BGK55_06655 SM00448 cheY-homologous receiver domain BGK55_06665 SM00387 Histidine kinase-like ATPases BGK55_06665 SM00388 His Kinase A (phosphoacceptor) domain BGK55_06665 SM00448 cheY-homologous receiver domain BGK55_06670 SM00387 Histidine kinase-like ATPases BGK55_06670 SM00388 His Kinase A (phosphoacceptor) domain BGK55_06670 SM00448 cheY-homologous receiver domain BGK55_06750 SM00422 helix_turn_helix, mercury resistance BGK55_06780 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BGK55_06790 SM00849 Metallo-beta-lactamase superfamily BGK55_06820 SM00421 helix_turn_helix, Lux Regulon BGK55_06870 SM00924 MgtE intracellular N domain BGK55_06915 SM00382 ATPases associated with a variety of cellular activities BGK55_06935 SM00116 Domain in cystathionine beta-synthase and other proteins. BGK55_07030 SM00054 EF-hand, calcium binding motif BGK55_07060 SM00671 Sel1-like repeats. BGK55_07065 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BGK55_07095 SM00382 ATPases associated with a variety of cellular activities BGK55_07110 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain BGK55_07140 SM00411 bacterial (prokaryotic) histone like domain BGK55_07155 SM00382 ATPases associated with a variety of cellular activities BGK55_07190 SM00732 Likely ribonuclease with RNase H fold. BGK55_07260 SM00267 diguanylate cyclase BGK55_07265 SM00829 Enoylreductase BGK55_07275 SM01092 CO dehydrogenase flavoprotein C-terminal domain BGK55_07280 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BGK55_07320 SM00248 ankyrin repeats BGK55_07370 SM00855 Phosphoglycerate mutase family BGK55_07385 SM00155 Phospholipase D. Active site motifs. BGK55_07390 SM00448 cheY-homologous receiver domain BGK55_07395 SM00138 Methyltransferase, chemotaxis proteins BGK55_07400 SM00052 Putative diguanylate phosphodiesterase BGK55_07400 SM00448 cheY-homologous receiver domain BGK55_07405 SM00260 Two component signalling adaptor domain BGK55_07410 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BGK55_07410 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BGK55_07415 SM00073 Histidine Phosphotransfer domain BGK55_07415 SM00260 Two component signalling adaptor domain BGK55_07415 SM00387 Histidine kinase-like ATPases BGK55_07415 SM01231 BGK55_07415 BGK55_07455 SM00487 DEAD-like helicases superfamily BGK55_07455 SM00490 helicase superfamily c-terminal domain BGK55_07455 SM00982 BGK55_07455 BGK55_07455 SM01058 CarD-like/TRCF domain BGK55_07470 SM00448 cheY-homologous receiver domain BGK55_07470 SM00862 Transcriptional regulatory protein, C terminal BGK55_07475 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BGK55_07475 SM00387 Histidine kinase-like ATPases BGK55_07475 SM00388 His Kinase A (phosphoacceptor) domain BGK55_07480 SM00645 Papain family cysteine protease BGK55_07560 SM00342 helix_turn_helix, arabinose operon control protein BGK55_07650 SM00342 helix_turn_helix, arabinose operon control protein BGK55_07650 SM00478 endonuclease III BGK55_07650 SM01009 AlkA N-terminal domain BGK55_07695 SM00487 DEAD-like helicases superfamily BGK55_07695 SM00490 helicase superfamily c-terminal domain BGK55_07700 SM00052 Putative diguanylate phosphodiesterase BGK55_07700 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BGK55_07700 SM00091 PAS domain BGK55_07700 SM00267 diguanylate cyclase BGK55_07705 SM00363 S4 RNA-binding domain BGK55_07710 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BGK55_07710 SM00267 diguanylate cyclase BGK55_07750 SM00448 cheY-homologous receiver domain BGK55_07750 SM00862 Transcriptional regulatory protein, C terminal BGK55_07785 SM00382 ATPases associated with a variety of cellular activities BGK55_07920 SM00316 Ribosomal protein S1-like RNA-binding domain BGK55_07955 SM01351 BGK55_07955 BGK55_07970 SM00977 TilS substrate C-terminal domain BGK55_07975 SM00098 Alkaline phosphatase homologues BGK55_08030 SM01160 BGK55_08030 BGK55_08145 SM00257 Lysin motif BGK55_08175 SM00859 Semialdehyde dehydrogenase, NAD binding domain BGK55_08255 SM00052 Putative diguanylate phosphodiesterase BGK55_08255 SM00267 diguanylate cyclase BGK55_08255 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BGK55_08315 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BGK55_08320 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BGK55_08370 SM00316 Ribosomal protein S1-like RNA-binding domain BGK55_08370 SM00322 K homology RNA-binding domain BGK55_08390 SM01387 BGK55_08390 BGK55_08415 SM01001 AIR carboxylase BGK55_08435 SM00822 BGK55_08435 BGK55_08490 SM00487 DEAD-like helicases superfamily BGK55_08490 SM00490 helicase superfamily c-terminal domain BGK55_08550 SM00382 ATPases associated with a variety of cellular activities BGK55_08590 SM00642 Alpha-amylase domain BGK55_08615 SM00642 Alpha-amylase domain BGK55_08620 SM00354 helix_turn _helix lactose operon repressor BGK55_08625 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BGK55_08650 SM00873 B3/4 domain BGK55_08650 SM00874 tRNA synthetase B5 domain BGK55_08650 SM00896 Ferredoxin-fold anticodon binding domain BGK55_08655 SM00411 bacterial (prokaryotic) histone like domain BGK55_08660 SM00422 helix_turn_helix, mercury resistance BGK55_08745 SM00849 Metallo-beta-lactamase superfamily BGK55_08770 SM00861 Transketolase, pyrimidine binding domain BGK55_08775 SM00507 HNH nucleases BGK55_08810 SM00465 GIY-YIG type nucleases (URI domain) BGK55_08825 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BGK55_08825 SM00091 PAS domain BGK55_08825 SM00387 Histidine kinase-like ATPases BGK55_08825 SM00388 His Kinase A (phosphoacceptor) domain BGK55_08825 SM00448 cheY-homologous receiver domain BGK55_08835 SM00478 endonuclease III BGK55_08840 SM00382 ATPases associated with a variety of cellular activities BGK55_08840 SM00962 SRP54-type protein, GTPase domain BGK55_08840 SM00963 SRP54-type protein, helical bundle domain BGK55_08845 SM00342 helix_turn_helix, arabinose operon control protein BGK55_08870 SM01130 BGK55_08870 BGK55_08985 SM00387 Histidine kinase-like ATPases BGK55_09055 SM00344 helix_turn_helix ASNC type BGK55_09070 SM01323 BGK55_09070 BGK55_09125 SM00354 helix_turn _helix lactose operon repressor BGK55_09165 SM00448 cheY-homologous receiver domain BGK55_09165 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BGK55_09170 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BGK55_09170 SM00091 PAS domain BGK55_09170 SM00387 Histidine kinase-like ATPases BGK55_09170 SM00388 His Kinase A (phosphoacceptor) domain BGK55_09170 SM00448 cheY-homologous receiver domain BGK55_09170 SM01079 BGK55_09170 BGK55_09225 SM00267 diguanylate cyclase BGK55_09225 SM00448 cheY-homologous receiver domain BGK55_09235 SM01230 BGK55_09235 BGK55_09245 SM01230 BGK55_09245 BGK55_09275 SM00382 ATPases associated with a variety of cellular activities BGK55_09310 SM00116 Domain in cystathionine beta-synthase and other proteins. BGK55_09310 SM01091 Transporter associated domain BGK55_09335 SM00729 Elongator protein 3, MiaB family, Radical SAM BGK55_09395 SM00487 DEAD-like helicases superfamily BGK55_09395 SM00490 helicase superfamily c-terminal domain BGK55_09405 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BGK55_09405 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BGK55_09430 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BGK55_09430 SM00267 diguanylate cyclase BGK55_09445 SM00528 Domain in histone-like proteins of HNS family BGK55_09460 SM00474 3'-5' exonuclease BGK55_09500 SM00646 BGK55_09500 BGK55_09505 SM00853 MutL C terminal dimerisation domain BGK55_09505 SM01340 BGK55_09505 BGK55_09530 SM00822 BGK55_09530 BGK55_09545 SM00052 Putative diguanylate phosphodiesterase BGK55_09545 SM00267 diguanylate cyclase BGK55_09555 SM01322 BGK55_09555 BGK55_09560 SM00357 Cold shock protein domain BGK55_09585 SM00487 DEAD-like helicases superfamily BGK55_09585 SM00490 helicase superfamily c-terminal domain BGK55_09590 SM00382 ATPases associated with a variety of cellular activities BGK55_09625 SM00052 Putative diguanylate phosphodiesterase BGK55_09625 SM00267 diguanylate cyclase BGK55_09625 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BGK55_09635 SM00841 Elongation factor P, C-terminal BGK55_09635 SM01185 BGK55_09635 BGK55_09700 SM00849 Metallo-beta-lactamase superfamily BGK55_09740 SM01234 BGK55_09740 BGK55_09760 SM00840 BGK55_09760 BGK55_09800 SM00859 Semialdehyde dehydrogenase, NAD binding domain BGK55_09815 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BGK55_09825 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BGK55_09850 SM00382 ATPases associated with a variety of cellular activities BGK55_09855 SM00382 ATPases associated with a variety of cellular activities BGK55_09860 SM00357 Cold shock protein domain BGK55_09910 SM00382 ATPases associated with a variety of cellular activities BGK55_09935 SM00363 S4 RNA-binding domain BGK55_09960 SM00354 helix_turn _helix lactose operon repressor BGK55_10035 SM00316 Ribosomal protein S1-like RNA-binding domain BGK55_10040 SM00411 bacterial (prokaryotic) histone like domain BGK55_10050 SM00028 Tetratricopeptide repeats BGK55_10060 SM00822 BGK55_10060 BGK55_10085 SM00116 Domain in cystathionine beta-synthase and other proteins. BGK55_10085 SM01240 BGK55_10085 BGK55_10140 SM00829 Enoylreductase BGK55_10165 SM00849 Metallo-beta-lactamase superfamily BGK55_10240 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BGK55_10245 SM00421 helix_turn_helix, Lux Regulon BGK55_10245 SM00448 cheY-homologous receiver domain BGK55_10255 SM00342 helix_turn_helix, arabinose operon control protein BGK55_10300 SM00529 Helix-turn-helix diphteria tox regulatory element BGK55_10310 SM00479 BGK55_10310 BGK55_10380 SM00316 Ribosomal protein S1-like RNA-binding domain BGK55_10380 SM00732 Likely ribonuclease with RNase H fold. BGK55_10385 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BGK55_10385 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BGK55_10385 SM00091 PAS domain BGK55_10385 SM00387 Histidine kinase-like ATPases BGK55_10385 SM00388 His Kinase A (phosphoacceptor) domain BGK55_10385 SM00448 cheY-homologous receiver domain BGK55_10390 SM00448 cheY-homologous receiver domain BGK55_10505 SM00382 ATPases associated with a variety of cellular activities BGK55_10555 SM00382 ATPases associated with a variety of cellular activities BGK55_10565 SM00849 Metallo-beta-lactamase superfamily BGK55_10580 SM00382 ATPases associated with a variety of cellular activities BGK55_10595 SM00226 Low molecular weight phosphatase family BGK55_10605 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BGK55_10605 SM00465 GIY-YIG type nucleases (URI domain) BGK55_10645 SM00073 Histidine Phosphotransfer domain BGK55_10645 SM00260 Two component signalling adaptor domain BGK55_10645 SM00387 Histidine kinase-like ATPases BGK55_10645 SM01231 BGK55_10645 BGK55_10655 SM00448 cheY-homologous receiver domain BGK55_10670 SM00382 ATPases associated with a variety of cellular activities BGK55_10670 SM00962 SRP54-type protein, GTPase domain BGK55_10685 SM00052 Putative diguanylate phosphodiesterase BGK55_10685 SM00267 diguanylate cyclase BGK55_10690 SM00267 diguanylate cyclase BGK55_10715 SM00670 Large family of predicted nucleotide-binding domains BGK55_10725 SM00857 Resolvase, N terminal domain BGK55_10780 SM00382 ATPases associated with a variety of cellular activities BGK55_10845 SM00822 BGK55_10845 BGK55_10870 SM00382 ATPases associated with a variety of cellular activities BGK55_10875 SM00448 cheY-homologous receiver domain BGK55_10885 SM00421 helix_turn_helix, Lux Regulon BGK55_10885 SM00448 cheY-homologous receiver domain BGK55_10925 SM00047 Lysozyme subfamily 2 BGK55_10970 SM00260 Two component signalling adaptor domain BGK55_10970 SM00448 cheY-homologous receiver domain BGK55_10975 SM00858 BGK55_10975 BGK55_10990 SM00387 Histidine kinase-like ATPases BGK55_10995 SM00052 Putative diguanylate phosphodiesterase BGK55_10995 SM00267 diguanylate cyclase BGK55_10995 SM00448 cheY-homologous receiver domain BGK55_11000 SM00091 PAS domain BGK55_11000 SM00387 Histidine kinase-like ATPases BGK55_11005 SM00052 Putative diguanylate phosphodiesterase BGK55_11005 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BGK55_11005 SM00091 PAS domain BGK55_11005 SM00267 diguanylate cyclase BGK55_11015 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BGK55_11040 SM00382 ATPases associated with a variety of cellular activities BGK55_11040 SM01086 C-terminal, D2-small domain, of ClpB protein BGK55_11045 SM00316 Ribosomal protein S1-like RNA-binding domain BGK55_11085 SM00382 ATPases associated with a variety of cellular activities BGK55_11110 SM00562 BGK55_11110 BGK55_11120 SM00028 Tetratricopeptide repeats BGK55_11135 SM00564 beta-propeller repeat BGK55_11140 SM00382 ATPases associated with a variety of cellular activities BGK55_11145 SM00852 Probable molybdopterin binding domain BGK55_11150 SM00450 Rhodanese Homology Domain BGK55_11250 SM01126 BGK55_11250 BGK55_11290 SM00852 Probable molybdopterin binding domain BGK55_11345 SM00052 Putative diguanylate phosphodiesterase BGK55_11350 SM00869 Autotransporter beta-domain BGK55_11355 SM00421 helix_turn_helix, Lux Regulon BGK55_11355 SM00448 cheY-homologous receiver domain BGK55_11360 SM00387 Histidine kinase-like ATPases BGK55_11360 SM00388 His Kinase A (phosphoacceptor) domain BGK55_11380 SM00869 Autotransporter beta-domain BGK55_11395 SM00448 cheY-homologous receiver domain BGK55_11395 SM00850 LytTr DNA-binding domain BGK55_11495 SM00363 S4 RNA-binding domain BGK55_11500 SM00316 Ribosomal protein S1-like RNA-binding domain BGK55_11505 SM00421 helix_turn_helix, Lux Regulon BGK55_11505 SM00448 cheY-homologous receiver domain BGK55_11510 SM00450 Rhodanese Homology Domain BGK55_11530 SM00984 UDP binding domain BGK55_11545 SM00823 Phosphopantetheine attachment site BGK55_11545 SM00824 Thioesterase BGK55_11600 SM00260 Two component signalling adaptor domain BGK55_11610 SM00448 cheY-homologous receiver domain BGK55_11615 SM00073 Histidine Phosphotransfer domain BGK55_11615 SM00260 Two component signalling adaptor domain BGK55_11615 SM00387 Histidine kinase-like ATPases BGK55_11615 SM01231 BGK55_11615 BGK55_11620 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BGK55_11620 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BGK55_11630 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BGK55_11630 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BGK55_11630 SM01049 BGK55_11630 BGK55_11635 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BGK55_11635 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BGK55_11645 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BGK55_11650 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BGK55_11650 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BGK55_11655 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BGK55_11655 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BGK55_11670 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BGK55_11670 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BGK55_11675 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BGK55_11675 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BGK55_11680 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BGK55_11680 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BGK55_11695 SM00260 Two component signalling adaptor domain BGK55_11705 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BGK55_11705 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BGK55_11710 SM00138 Methyltransferase, chemotaxis proteins BGK55_11720 SM00448 cheY-homologous receiver domain BGK55_11725 SM00052 Putative diguanylate phosphodiesterase BGK55_11725 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BGK55_11725 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BGK55_11725 SM00091 PAS domain BGK55_11725 SM00267 diguanylate cyclase BGK55_11745 SM00966 SpoVT / AbrB like domain BGK55_11770 SM00073 Histidine Phosphotransfer domain BGK55_11770 SM00387 Histidine kinase-like ATPases BGK55_11770 SM00388 His Kinase A (phosphoacceptor) domain BGK55_11770 SM00448 cheY-homologous receiver domain BGK55_11775 SM00448 cheY-homologous receiver domain BGK55_11775 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BGK55_11785 SM00937 BGK55_11785 BGK55_11790 SM00850 LytTr DNA-binding domain BGK55_11850 SM00060 Fibronectin type 3 domain BGK55_11870 SM00851 MGS-like domain BGK55_11870 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BGK55_11880 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BGK55_11915 SM00899 BGK55_11915 BGK55_11935 SM00822 BGK55_11935 BGK55_11940 SM00841 Elongation factor P, C-terminal BGK55_11940 SM01185 BGK55_11940 BGK55_11985 SM01007 Class II Aldolase and Adducin N-terminal domain BGK55_12060 SM00100 Cyclic nucleotide-monophosphate binding domain BGK55_12060 SM00419 helix_turn_helix, cAMP Regulatory protein BGK55_12345 SM00014 Acid phosphatase homologues BGK55_12355 SM00387 Histidine kinase-like ATPases BGK55_12360 SM00448 cheY-homologous receiver domain BGK55_12370 SM00052 Putative diguanylate phosphodiesterase BGK55_12370 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BGK55_12370 SM00267 diguanylate cyclase BGK55_12440 SM00646 BGK55_12440 BGK55_12470 SM00758 BGK55_12470 BGK55_12515 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BGK55_12540 SM01130 BGK55_12540 BGK55_12560 SM00670 Large family of predicted nucleotide-binding domains BGK55_12630 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BGK55_12630 SM00091 PAS domain BGK55_12630 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BGK55_12645 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BGK55_12655 SM00382 ATPases associated with a variety of cellular activities BGK55_12695 SM00382 ATPases associated with a variety of cellular activities BGK55_12705 SM01103 BGK55_12705 BGK55_12715 SM00257 Lysin motif BGK55_12735 SM00463 Small MutS-related domain BGK55_12760 SM01192 BGK55_12760 BGK55_12760 SM01193 BGK55_12760 BGK55_12785 SM00387 Histidine kinase-like ATPases BGK55_12785 SM00433 TopoisomeraseII BGK55_12810 SM00116 Domain in cystathionine beta-synthase and other proteins. BGK55_12810 SM01091 Transporter associated domain BGK55_12835 SM00382 ATPases associated with a variety of cellular activities BGK55_12845 SM00729 Elongator protein 3, MiaB family, Radical SAM BGK55_12970 SM01126 BGK55_12970 BGK55_13035 SM00091 PAS domain BGK55_13035 SM00387 Histidine kinase-like ATPases BGK55_13035 SM00388 His Kinase A (phosphoacceptor) domain BGK55_13035 SM00448 cheY-homologous receiver domain BGK55_13045 SM00448 cheY-homologous receiver domain BGK55_13065 SM00347 helix_turn_helix multiple antibiotic resistance protein BGK55_13075 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BGK55_13075 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BGK55_13120 SM00830 Chorismate mutase type II BGK55_13140 SM00240 Forkhead associated domain BGK55_13160 SM00345 helix_turn_helix gluconate operon transcriptional repressor BGK55_13160 SM00866 BGK55_13160 BGK55_13200 SM00564 beta-propeller repeat BGK55_13205 SM00434 DNA Topoisomerase IV BGK55_13225 SM00292 breast cancer carboxy-terminal domain BGK55_13225 SM00532 Ligase N family BGK55_13240 SM00771 ZipA, C-terminal domain (FtsZ-binding) BGK55_13245 SM00968 SMC proteins Flexible Hinge Domain BGK55_13310 SM00421 helix_turn_helix, Lux Regulon BGK55_13310 SM00448 cheY-homologous receiver domain BGK55_13370 SM00947 Carbonic anhydrase BGK55_13395 SM00479 BGK55_13395 BGK55_13425 SM00981 BGK55_13425 BGK55_13430 SM00382 ATPases associated with a variety of cellular activities BGK55_13450 SM00644 BGK55_13450 BGK55_13460 SM00450 Rhodanese Homology Domain BGK55_13485 SM00478 endonuclease III BGK55_13495 SM00947 Carbonic anhydrase BGK55_13530 SM00382 ATPases associated with a variety of cellular activities BGK55_13545 SM00479 BGK55_13545 BGK55_13550 SM00267 diguanylate cyclase BGK55_13555 SM00967 RNA 2'-O ribose methyltransferase substrate binding BGK55_13565 SM00316 Ribosomal protein S1-like RNA-binding domain BGK55_13565 SM00357 Cold shock protein domain BGK55_13565 SM00955 BGK55_13565 BGK55_13585 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BGK55_13615 SM00354 helix_turn _helix lactose operon repressor BGK55_13635 SM00984 UDP binding domain BGK55_13655 SM00345 helix_turn_helix gluconate operon transcriptional repressor BGK55_13660 SM00382 ATPases associated with a variety of cellular activities BGK55_13690 SM00116 Domain in cystathionine beta-synthase and other proteins. BGK55_13690 SM01091 Transporter associated domain BGK55_13710 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BGK55_13720 SM00861 Transketolase, pyrimidine binding domain BGK55_13745 SM00382 ATPases associated with a variety of cellular activities BGK55_13785 SM00271 DnaJ molecular chaperone homology domain BGK55_13880 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BGK55_13880 SM00267 diguanylate cyclase BGK55_13890 SM00267 diguanylate cyclase BGK55_14010 SM00357 Cold shock protein domain BGK55_14025 SM00947 Carbonic anhydrase BGK55_14040 SM00382 ATPases associated with a variety of cellular activities BGK55_14060 SM00347 helix_turn_helix multiple antibiotic resistance protein BGK55_14090 SM00631 BGK55_14090 BGK55_14095 SM01217 BGK55_14095 BGK55_14120 SM00347 helix_turn_helix multiple antibiotic resistance protein BGK55_14130 SM00434 DNA Topoisomerase IV BGK55_14160 SM00710 Parallel beta-helix repeats BGK55_14160 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses BGK55_14165 SM01172 BGK55_14165 BGK55_14185 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BGK55_14195 SM00972 Spore Coat Protein U domain BGK55_14210 SM00972 Spore Coat Protein U domain BGK55_14235 SM00267 diguanylate cyclase BGK55_14265 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BGK55_14305 SM00481 DNA polymerase alpha chain like domain BGK55_14390 SM00382 ATPases associated with a variety of cellular activities BGK55_14600 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BGK55_14605 SM00869 Autotransporter beta-domain BGK55_14625 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BGK55_14625 SM00267 diguanylate cyclase BGK55_14655 SM00487 DEAD-like helicases superfamily BGK55_14655 SM00490 helicase superfamily c-terminal domain BGK55_14670 SM00357 Cold shock protein domain BGK55_14705 SM01118 BGK55_14705 BGK55_14715 SM00448 cheY-homologous receiver domain BGK55_14730 SM00358 Double-stranded RNA binding motif BGK55_14730 SM00535 Ribonuclease III family BGK55_14745 SM00838 Elongation factor G C-terminus BGK55_14750 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BGK55_14800 SM00530 Helix-turn-helix XRE-family like proteins BGK55_14840 SM00812 Alpha-L-fucosidase BGK55_14885 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BGK55_14885 SM00534 ATPase domain of DNA mismatch repair MUTS family BGK55_14960 SM00382 ATPases associated with a variety of cellular activities BGK55_14960 SM00962 SRP54-type protein, GTPase domain BGK55_14960 SM00963 SRP54-type protein, helical bundle domain BGK55_14980 SM00813 Alpha-L-arabinofuranosidase C-terminus BGK55_14990 SM00448 cheY-homologous receiver domain BGK55_14995 SM00091 PAS domain BGK55_14995 SM00387 Histidine kinase-like ATPases BGK55_14995 SM00388 His Kinase A (phosphoacceptor) domain BGK55_15000 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BGK55_15000 SM00387 Histidine kinase-like ATPases BGK55_15000 SM00388 His Kinase A (phosphoacceptor) domain BGK55_15000 SM00448 cheY-homologous receiver domain BGK55_15005 SM00138 Methyltransferase, chemotaxis proteins BGK55_15015 SM00387 Histidine kinase-like ATPases BGK55_15015 SM00388 His Kinase A (phosphoacceptor) domain BGK55_15015 SM00448 cheY-homologous receiver domain BGK55_15040 SM00387 Histidine kinase-like ATPases BGK55_15040 SM00388 His Kinase A (phosphoacceptor) domain BGK55_15040 SM00448 cheY-homologous receiver domain BGK55_15045 SM00387 Histidine kinase-like ATPases BGK55_15045 SM00388 His Kinase A (phosphoacceptor) domain BGK55_15080 SM00342 helix_turn_helix, arabinose operon control protein BGK55_15085 SM00862 Transcriptional regulatory protein, C terminal BGK55_15095 SM00382 ATPases associated with a variety of cellular activities BGK55_15100 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BGK55_15260 SM00904 Riboflavin kinase BGK55_15350 SM00244 prohibitin homologues BGK55_15370 SM00478 endonuclease III BGK55_15385 SM00421 helix_turn_helix, Lux Regulon BGK55_15385 SM00448 cheY-homologous receiver domain BGK55_15425 SM00387 Histidine kinase-like ATPases BGK55_15425 SM00388 His Kinase A (phosphoacceptor) domain BGK55_15430 SM00448 cheY-homologous receiver domain BGK55_15430 SM00862 Transcriptional regulatory protein, C terminal BGK55_15480 SM01060 BGK55_15480 BGK55_15510 SM00091 PAS domain BGK55_15510 SM00342 helix_turn_helix, arabinose operon control protein BGK55_15555 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BGK55_15565 SM00481 DNA polymerase alpha chain like domain BGK55_15585 SM00966 SpoVT / AbrB like domain BGK55_15605 SM00974 BGK55_15605 BGK55_15620 SM01092 CO dehydrogenase flavoprotein C-terminal domain BGK55_15635 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BGK55_15640 SM00052 Putative diguanylate phosphodiesterase BGK55_15715 SM00487 DEAD-like helicases superfamily BGK55_15715 SM00490 helicase superfamily c-terminal domain BGK55_15745 SM00822 BGK55_15745 BGK55_15760 SM00788 Adenylosuccinate synthetase BGK55_15765 SM01321 BGK55_15765 BGK55_15770 SM00244 prohibitin homologues BGK55_15775 SM00244 prohibitin homologues BGK55_15780 SM00448 cheY-homologous receiver domain BGK55_15785 SM00271 DnaJ molecular chaperone homology domain BGK55_15860 SM00382 ATPases associated with a variety of cellular activities BGK55_15895 SM00825 Beta-ketoacyl synthase BGK55_15905 SM00822 BGK55_15905 BGK55_15910 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BGK55_15955 SM00382 ATPases associated with a variety of cellular activities BGK55_15965 SM00460 Transglutaminase/protease-like homologues BGK55_15980 SM00493 BGK55_15980 BGK55_15990 SM00382 ATPases associated with a variety of cellular activities BGK55_16025 SM00729 Elongator protein 3, MiaB family, Radical SAM BGK55_16030 SM00849 Metallo-beta-lactamase superfamily BGK55_16055 SM00331 Sigma factor PP2C-like phosphatases BGK55_16055 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BGK55_16060 SM00479 BGK55_16060 BGK55_16075 SM00849 Metallo-beta-lactamase superfamily BGK55_16080 SM00257 Lysin motif BGK55_16105 SM00411 bacterial (prokaryotic) histone like domain BGK55_16110 SM00382 ATPases associated with a variety of cellular activities BGK55_16110 SM00464 Found in ATP-dependent protease La (LON) BGK55_16115 SM00382 ATPases associated with a variety of cellular activities BGK55_16115 SM00994 ClpX C4-type zinc finger BGK55_16115 SM01086 C-terminal, D2-small domain, of ClpB protein BGK55_16135 SM00091 PAS domain BGK55_16135 SM00387 Histidine kinase-like ATPases BGK55_16175 SM00530 Helix-turn-helix XRE-family like proteins BGK55_16205 SM00327 von Willebrand factor (vWF) type A domain BGK55_16255 SM00248 ankyrin repeats BGK55_16295 SM00528 Domain in histone-like proteins of HNS family BGK55_16310 SM00869 Autotransporter beta-domain BGK55_16365 SM00354 helix_turn _helix lactose operon repressor BGK55_16395 SM00967 RNA 2'-O ribose methyltransferase substrate binding BGK55_16475 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BGK55_16475 SM00387 Histidine kinase-like ATPases BGK55_16510 SM00506 Appr-1"-p processing enzyme BGK55_16550 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BGK55_16575 SM00849 Metallo-beta-lactamase superfamily BGK55_16590 SM00382 ATPases associated with a variety of cellular activities BGK55_16670 SM00861 Transketolase, pyrimidine binding domain BGK55_16685 SM00028 Tetratricopeptide repeats BGK55_16685 SM00327 von Willebrand factor (vWF) type A domain BGK55_16690 SM00327 von Willebrand factor (vWF) type A domain BGK55_16705 SM00382 ATPases associated with a variety of cellular activities BGK55_16710 SM00965 Secretin and TonB N terminus short domain BGK55_16760 SM00487 DEAD-like helicases superfamily BGK55_16760 SM00490 helicase superfamily c-terminal domain BGK55_16770 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BGK55_16770 SM00954 Region found in RelA / SpoT proteins BGK55_16775 SM01409 BGK55_16775 BGK55_16780 SM00072 Guanylate kinase homologues. BGK55_16805 SM00729 Elongator protein 3, MiaB family, Radical SAM BGK55_16830 SM01011 Aminopeptidase P, N-terminal domain BGK55_16900 SM00028 Tetratricopeptide repeats BGK55_16900 SM00382 ATPases associated with a variety of cellular activities BGK55_16900 SM00421 helix_turn_helix, Lux Regulon BGK55_16970 SM00464 Found in ATP-dependent protease La (LON) BGK55_17020 SM00342 helix_turn_helix, arabinose operon control protein BGK55_17025 SM00862 Transcriptional regulatory protein, C terminal BGK55_17040 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BGK55_17070 SM00917 LeuA allosteric (dimerisation) domain BGK55_17075 SM01329 BGK55_17075 BGK55_17095 SM00267 diguanylate cyclase BGK55_17145 SM00919 Malic enzyme, NAD binding domain BGK55_17145 SM01274 BGK55_17145 BGK55_17165 SM00387 Histidine kinase-like ATPases BGK55_17165 SM00388 His Kinase A (phosphoacceptor) domain BGK55_17165 SM00448 cheY-homologous receiver domain BGK55_17205 SM00421 helix_turn_helix, Lux Regulon BGK55_17205 SM00448 cheY-homologous receiver domain BGK55_17215 SM00387 Histidine kinase-like ATPases BGK55_17215 SM00388 His Kinase A (phosphoacceptor) domain BGK55_17220 SM00448 cheY-homologous receiver domain BGK55_17220 SM00862 Transcriptional regulatory protein, C terminal BGK55_17235 SM00822 BGK55_17235 BGK55_17240 SM00354 helix_turn _helix lactose operon repressor BGK55_17255 SM00642 Alpha-amylase domain BGK55_17265 SM01154 BGK55_17265 BGK55_17310 SM00382 ATPases associated with a variety of cellular activities BGK55_17340 SM00450 Rhodanese Homology Domain BGK55_17410 SM00028 Tetratricopeptide repeats BGK55_17490 SM00345 helix_turn_helix gluconate operon transcriptional repressor BGK55_17490 SM00866 BGK55_17490 BGK55_17550 SM00382 ATPases associated with a variety of cellular activities BGK55_17575 SM01211 BGK55_17575 BGK55_17640 SM00656 BGK55_17640 BGK55_17670 SM00528 Domain in histone-like proteins of HNS family BGK55_17685 SM00382 ATPases associated with a variety of cellular activities BGK55_17710 SM00882 Coenzyme A transferase BGK55_17715 SM00882 Coenzyme A transferase BGK55_17730 SM00984 UDP binding domain BGK55_17755 SM00893 Electron transfer flavoprotein domain BGK55_17760 SM00893 Electron transfer flavoprotein domain BGK55_17820 SM00382 ATPases associated with a variety of cellular activities BGK55_17845 SM00116 Domain in cystathionine beta-synthase and other proteins. BGK55_17880 SM00487 DEAD-like helicases superfamily BGK55_17880 SM00490 helicase superfamily c-terminal domain BGK55_17915 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BGK55_17950 SM00825 Beta-ketoacyl synthase BGK55_18020 SM00382 ATPases associated with a variety of cellular activities BGK55_18040 SM00382 ATPases associated with a variety of cellular activities BGK55_18040 SM00448 cheY-homologous receiver domain BGK55_18045 SM00387 Histidine kinase-like ATPases BGK55_18060 SM00830 Chorismate mutase type II BGK55_18070 SM00382 ATPases associated with a variety of cellular activities BGK55_18140 SM00986 Uracil DNA glycosylase superfamily BGK55_18140 SM00987 UreE urease accessory protein, C-terminal domain BGK55_18175 SM00382 ATPases associated with a variety of cellular activities BGK55_18175 SM00930 BGK55_18175 BGK55_18195 SM00387 Histidine kinase-like ATPases BGK55_18195 SM00388 His Kinase A (phosphoacceptor) domain BGK55_18195 SM00448 cheY-homologous receiver domain BGK55_18250 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BGK55_18250 SM00091 PAS domain BGK55_18250 SM00387 Histidine kinase-like ATPases BGK55_18250 SM00388 His Kinase A (phosphoacceptor) domain BGK55_18250 SM00448 cheY-homologous receiver domain BGK55_18270 SM01005 Alanine racemase, C-terminal domain BGK55_18280 SM00344 helix_turn_helix ASNC type BGK55_18335 SM00382 ATPases associated with a variety of cellular activities BGK55_18345 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. BGK55_18350 SM00986 Uracil DNA glycosylase superfamily BGK55_18350 SM00987 UreE urease accessory protein, C-terminal domain BGK55_18355 SM00729 Elongator protein 3, MiaB family, Radical SAM BGK55_18420 SM00448 cheY-homologous receiver domain BGK55_18420 SM00850 LytTr DNA-binding domain BGK55_18425 SM00387 Histidine kinase-like ATPases BGK55_18465 SM00091 PAS domain BGK55_18465 SM00138 Methyltransferase, chemotaxis proteins BGK55_18465 SM00911 HWE histidine kinase BGK55_18470 SM00448 cheY-homologous receiver domain BGK55_18480 SM00382 ATPases associated with a variety of cellular activities BGK55_18480 SM00448 cheY-homologous receiver domain BGK55_18535 SM00382 ATPases associated with a variety of cellular activities BGK55_18610 SM00382 ATPases associated with a variety of cellular activities BGK55_18615 SM00631 BGK55_18615 BGK55_18780 SM00257 Lysin motif BGK55_18805 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BGK55_18805 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BGK55_18805 SM00493 BGK55_18805 BGK55_18865 SM00487 DEAD-like helicases superfamily BGK55_18865 SM00490 helicase superfamily c-terminal domain BGK55_18900 SM00986 Uracil DNA glycosylase superfamily BGK55_18900 SM00987 UreE urease accessory protein, C-terminal domain BGK55_18905 SM00448 cheY-homologous receiver domain BGK55_18915 SM00382 ATPases associated with a variety of cellular activities BGK55_18920 SM00487 DEAD-like helicases superfamily BGK55_18920 SM00490 helicase superfamily c-terminal domain BGK55_18930 SM00357 Cold shock protein domain BGK55_18930 SM00382 ATPases associated with a variety of cellular activities BGK55_18930 SM00959 Rho termination factor, N-terminal domain BGK55_18960 SM00257 Lysin motif BGK55_18990 SM01150 BGK55_18990 BGK55_19035 SM00644 BGK55_19035 BGK55_19045 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BGK55_19080 SM01217 BGK55_19080 BGK55_19085 SM00905 Dihydroneopterin aldolase BGK55_19110 SM00400 zinc finger BGK55_19110 SM00493 BGK55_19110 BGK55_19110 SM00766 DNA primase DnaG DnaB-binding BGK55_19210 SM00363 S4 RNA-binding domain BGK55_19255 SM00470 ParB-like nuclease domain BGK55_19275 SM01259 BGK55_19275 BGK55_19305 SM00836 DALR anticodon binding domain BGK55_19305 SM01016 Arginyl tRNA synthetase N terminal dom BGK55_19375 SM00938 Nitrogen regulatory protein P-II BGK55_19385 SM00382 ATPases associated with a variety of cellular activities BGK55_19400 SM00052 Putative diguanylate phosphodiesterase BGK55_19430 SM00244 prohibitin homologues BGK55_19480 SM00448 cheY-homologous receiver domain BGK55_19480 SM00862 Transcriptional regulatory protein, C terminal BGK55_19485 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BGK55_19485 SM00387 Histidine kinase-like ATPases BGK55_19485 SM00388 His Kinase A (phosphoacceptor) domain BGK55_19510 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BGK55_19555 SM01060 BGK55_19555 BGK55_19570 SM00421 helix_turn_helix, Lux Regulon BGK55_19570 SM00448 cheY-homologous receiver domain BGK55_19585 SM00382 ATPases associated with a variety of cellular activities BGK55_19625 SM00849 Metallo-beta-lactamase superfamily BGK55_19655 SM00960 Roadblock/LC7 domain BGK55_19775 SM00387 Histidine kinase-like ATPases BGK55_19775 SM00388 His Kinase A (phosphoacceptor) domain BGK55_19780 SM00448 cheY-homologous receiver domain BGK55_19780 SM00862 Transcriptional regulatory protein, C terminal BGK55_19800 SM00248 ankyrin repeats BGK55_19805 SM01060 BGK55_19805 BGK55_19810 SM00491 BGK55_19810 BGK55_19840 SM00477 DNA/RNA non-specific endonuclease BGK55_19840 SM00892 DNA/RNA non-specific endonuclease BGK55_19860 SM01004 Delta-aminolevulinic acid dehydratase BGK55_19910 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BGK55_19930 SM00382 ATPases associated with a variety of cellular activities BGK55_19940 SM00530 Helix-turn-helix XRE-family like proteins BGK55_19980 SM00342 helix_turn_helix, arabinose operon control protein BGK55_19990 SM00382 ATPases associated with a variety of cellular activities BGK55_20050 SM00881 CoA binding domain BGK55_20055 SM00116 Domain in cystathionine beta-synthase and other proteins. BGK55_20055 SM00924 MgtE intracellular N domain BGK55_20060 SM01057 Eukaryotic-type carbonic anhydrase BGK55_20085 SM00248 ankyrin repeats BGK55_20095 SM00825 Beta-ketoacyl synthase BGK55_20120 SM00822 BGK55_20120 BGK55_20170 SM00563 Phosphate acyltransferases BGK55_20230 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BGK55_20230 SM00474 3'-5' exonuclease BGK55_20230 SM00475 5'-3' exonuclease BGK55_20230 SM00482 DNA polymerase A domain BGK55_20245 SM00912 haemagglutination activity domain BGK55_20265 SM00331 Sigma factor PP2C-like phosphatases BGK55_20265 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BGK55_20290 SM00240 Forkhead associated domain BGK55_20305 SM00028 Tetratricopeptide repeats BGK55_20345 SM00915 Jacalin-like lectin domain BGK55_20370 SM00382 ATPases associated with a variety of cellular activities BGK55_20370 SM01086 C-terminal, D2-small domain, of ClpB protein BGK55_20410 SM00342 helix_turn_helix, arabinose operon control protein BGK55_20420 SM01266 BGK55_20420 BGK55_20445 SM00155 Phospholipase D. Active site motifs. BGK55_20590 SM00421 helix_turn_helix, Lux Regulon BGK55_20590 SM00448 cheY-homologous receiver domain BGK55_20645 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BGK55_20660 SM00346 helix_turn_helix isocitrate lyase regulation BGK55_20675 SM00091 PAS domain BGK55_20675 SM00387 Histidine kinase-like ATPases BGK55_20675 SM00388 His Kinase A (phosphoacceptor) domain BGK55_20675 SM00448 cheY-homologous receiver domain BGK55_20700 SM00564 beta-propeller repeat BGK55_20750 SM00836 DALR anticodon binding domain BGK55_20760 SM00382 ATPases associated with a variety of cellular activities BGK55_20835 SM00354 helix_turn _helix lactose operon repressor BGK55_20850 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BGK55_20860 SM00758 BGK55_20860 BGK55_20860 SM01217 BGK55_20860 BGK55_20910 SM01007 Class II Aldolase and Adducin N-terminal domain BGK55_20935 SM00633 Glycosyl hydrolase family 10 BGK55_20960 SM00633 Glycosyl hydrolase family 10 BGK55_21015 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BGK55_21015 SM00388 His Kinase A (phosphoacceptor) domain BGK55_21050 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BGK55_21075 SM00354 helix_turn _helix lactose operon repressor BGK55_21085 SM00563 Phosphate acyltransferases BGK55_21090 SM00829 Enoylreductase BGK55_21105 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BGK55_21105 SM01232 BGK55_21105 BGK55_21140 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BGK55_21140 SM00091 PAS domain BGK55_21195 SM00347 helix_turn_helix multiple antibiotic resistance protein BGK55_21225 SM00155 Phospholipase D. Active site motifs. BGK55_21255 SM01126 BGK55_21255 BGK55_21310 SM00382 ATPases associated with a variety of cellular activities BGK55_21360 SM00829 Enoylreductase BGK55_21400 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BGK55_21400 SM00091 PAS domain BGK55_21400 SM00267 diguanylate cyclase BGK55_21420 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BGK55_21445 SM00014 Acid phosphatase homologues BGK55_21455 SM00028 Tetratricopeptide repeats BGK55_21575 SM00857 Resolvase, N terminal domain BGK55_21635 SM00857 Resolvase, N terminal domain BGK55_21665 SM00857 Resolvase, N terminal domain BGK55_21730 SM00857 Resolvase, N terminal domain BGK55_21740 SM00670 Large family of predicted nucleotide-binding domains BGK55_21795 SM00670 Large family of predicted nucleotide-binding domains BGK55_21805 SM00857 Resolvase, N terminal domain BGK55_21810 SM00857 Resolvase, N terminal domain BGK55_21965 SM00670 Large family of predicted nucleotide-binding domains BGK55_21975 SM00857 Resolvase, N terminal domain