APY29_00005	SSF48295	TrpR-like
APY29_00005	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_00010	SSF55979	DNA clamp
APY29_00015	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_00020	SSF54211	Ribosomal protein S5 domain 2-like
APY29_00020	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_00020	SSF56719	Type II DNA topoisomerase
APY29_00035	SSF48452	TPR-like
APY29_00040	SSF74653	TolA/TonB C-terminal domain
APY29_00060	SSF63892	Pyridoxine 5'-phosphate synthase
APY29_00070	SSF56024	Phospholipase D/nuclease
APY29_00075	SSF46689	Homeodomain-like
APY29_00080	SSF53098	Ribonuclease H-like
APY29_00110	SSF102712	JAB1/MPN domain
APY29_00120	SSF46689	Homeodomain-like
APY29_00125	SSF53098	Ribonuclease H-like
APY29_00135	SSF46689	Homeodomain-like
APY29_00145	SSF53098	Ribonuclease H-like
APY29_00150	SSF46689	Homeodomain-like
APY29_00160	SSF56349	DNA breaking-rejoining enzymes
APY29_00170	SSF144091	Rhomboid-like
APY29_00185	SSF50156	PDZ domain-like
APY29_00185	SSF52096	ClpP/crotonase
APY29_00190	SSF51261	Duplicated hybrid motif
APY29_00200	SSF52025	PA domain
APY29_00200	SSF53187	Zn-dependent exopeptidases
APY29_00210	SSF51445	(Trans)glycosidases
APY29_00215	SSF51445	(Trans)glycosidases
APY29_00225	SSF51445	(Trans)glycosidases
APY29_00230	SSF50129	GroES-like
APY29_00230	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_00235	SSF46548	alpha-helical ferredoxin
APY29_00235	SSF51971	Nucleotide-binding domain
APY29_00240	SSF51395	FMN-linked oxidoreductases
APY29_00240	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
APY29_00240	SSF69336	Alpha subunit of glutamate synthase, C-terminal domain
APY29_00250	SSF55869	DNA topoisomerase I domain
APY29_00250	SSF56349	DNA breaking-rejoining enzymes
APY29_00265	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_00275	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
APY29_00280	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
APY29_00290	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
APY29_00305	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
APY29_00320	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_00325	SSF52402	Adenine nucleotide alpha hydrolases-like
APY29_00325	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
APY29_00340	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_00355	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_00355	SSF90123	ABC transporter transmembrane region
APY29_00370	SSF52402	Adenine nucleotide alpha hydrolases-like
APY29_00370	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
APY29_00375	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_00385	SSF53795	PEP carboxykinase-like
APY29_00390	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_00395	SSF55729	Acyl-CoA N-acyltransferases (Nat)
APY29_00400	SSF88874	Receptor-binding domain of short tail fibre protein gp12
APY29_00405	SSF88874	Receptor-binding domain of short tail fibre protein gp12
APY29_00410	SSF88874	Receptor-binding domain of short tail fibre protein gp12
APY29_00420	SSF46785	"Winged helix" DNA-binding domain
APY29_00435	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_00440	SSF55144	LigT-like
APY29_00445	SSF56935	Porins
APY29_00450	SSF46785	"Winged helix" DNA-binding domain
APY29_00450	SSF53067	Actin-like ATPase domain
APY29_00455	SSF51695	PLC-like phosphodiesterases
APY29_00460	SSF53098	Ribonuclease H-like
APY29_00465	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_00475	SSF143120	YefM-like
APY29_00485	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_00490	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_00495	SSF46785	"Winged helix" DNA-binding domain
APY29_00495	SSF53850	Periplasmic binding protein-like II
APY29_00500	SSF53098	Ribonuclease H-like
APY29_00505	SSF46689	Homeodomain-like
APY29_00510	SSF49899	Concanavalin A-like lectins/glucanases
APY29_00515	SSF56935	Porins
APY29_00520	SSF53613	Ribokinase-like
APY29_00535	SSF46894	C-terminal effector domain of the bipartite response regulators
APY29_00535	SSF48452	TPR-like
APY29_00535	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_00555	SSF52172	CheY-like
APY29_00560	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_00565	SSF56601	beta-lactamase/transpeptidase-like
APY29_00570	SSF51395	FMN-linked oxidoreductases
APY29_00575	SSF100939	SPOC domain-like
APY29_00625	SSF51182	RmlC-like cupins
APY29_00635	SSF56935	Porins
APY29_00640	SSF53383	PLP-dependent transferases
APY29_00645	SSF56655	Carbohydrate phosphatase
APY29_00655	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
APY29_00660	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
APY29_00665	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
APY29_00675	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_00700	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_00710	SSF55961	Bet v1-like
APY29_00725	SSF52833	Thioredoxin-like
APY29_00745	SSF55811	Nudix
APY29_00750	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_00755	SSF46689	Homeodomain-like
APY29_00760	SSF53098	Ribonuclease H-like
APY29_00770	SSF46785	"Winged helix" DNA-binding domain
APY29_00775	SSF51445	(Trans)glycosidases
APY29_00780	SSF51011	Glycosyl hydrolase domain
APY29_00780	SSF51445	(Trans)glycosidases
APY29_00780	SSF56112	Protein kinase-like (PK-like)
APY29_00785	SSF51011	Glycosyl hydrolase domain
APY29_00785	SSF51445	(Trans)glycosidases
APY29_00785	SSF81296	E set domains
APY29_00790	SSF56300	Metallo-dependent phosphatases
APY29_00840	SSF101082	Typo IV secretion system protein TraC
APY29_00860	SSF54427	NTF2-like
APY29_00875	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_00880	SSF53955	Lysozyme-like
APY29_00900	SSF50118	Cell growth inhibitor/plasmid maintenance toxic component
APY29_00905	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_00905	SSF55464	Origin of replication-binding domain, RBD-like
APY29_00935	SSF143011	RelE-like
APY29_00965	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_00975	SSF53098	Ribonuclease H-like
APY29_00980	SSF46689	Homeodomain-like
APY29_00985	SSF52304	Type II 3-dehydroquinate dehydratase
APY29_00995	SSF50998	Quinoprotein alcohol dehydrogenase-like
APY29_01000	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_01005	SSF103473	MFS general substrate transporter
APY29_01010	SSF48208	Six-hairpin glycosidases
APY29_01010	SSF74650	Galactose mutarotase-like
APY29_01025	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_01025	SSF52172	CheY-like
APY29_01025	SSF55785	PYP-like sensor domain (PAS domain)
APY29_01025	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_01040	SSF46785	"Winged helix" DNA-binding domain
APY29_01040	SSF55781	GAF domain-like
APY29_01045	SSF103473	MFS general substrate transporter
APY29_01050	SSF54909	Dimeric alpha+beta barrel
APY29_01055	SSF51604	Enolase C-terminal domain-like
APY29_01055	SSF54826	Enolase N-terminal domain-like
APY29_01060	SSF56529	FAH
APY29_01065	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_01070	SSF51556	Metallo-dependent hydrolases
APY29_01075	SSF51430	NAD(P)-linked oxidoreductase
APY29_01095	SSF52833	Thioredoxin-like
APY29_01110	SSF46894	C-terminal effector domain of the bipartite response regulators
APY29_01110	SSF52172	CheY-like
APY29_01115	SSF56801	Acetyl-CoA synthetase-like
APY29_01120	SSF56935	Porins
APY29_01135	SSF51695	PLC-like phosphodiesterases
APY29_01140	SSF109998	Triger factor/SurA peptide-binding domain-like
APY29_01140	SSF54534	FKBP-like
APY29_01150	SSF46785	"Winged helix" DNA-binding domain
APY29_01150	SSF53067	Actin-like ATPase domain
APY29_01155	SSF56219	DNase I-like
APY29_01160	SSF51316	Mss4-like
APY29_01175	SSF56214	4'-phosphopantetheinyl transferase
APY29_01180	SSF56300	Metallo-dependent phosphatases
APY29_01185	SSF56300	Metallo-dependent phosphatases
APY29_01190	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_01205	SSF56954	Outer membrane efflux proteins (OEP)
APY29_01210	SSF51230	Single hybrid motif
APY29_01220	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
APY29_01220	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
APY29_01220	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
APY29_01225	SSF143800	L28p-like
APY29_01230	SSF57829	Zn-binding ribosomal proteins
APY29_01235	SSF51556	Metallo-dependent hydrolases
APY29_01240	SSF54506	Diaminopimelate epimerase-like
APY29_01245	SSF89562	RraA-like
APY29_01250	SSF46785	"Winged helix" DNA-binding domain
APY29_01250	SSF53850	Periplasmic binding protein-like II
APY29_01255	SSF56024	Phospholipase D/nuclease
APY29_01265	SSF51905	FAD/NAD(P)-binding domain
APY29_01270	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_01280	SSF51161	Trimeric LpxA-like enzymes
APY29_01285	SSF52402	Adenine nucleotide alpha hydrolases-like
APY29_01290	SSF46689	Homeodomain-like
APY29_01305	SSF141452	Hcp1-like
APY29_01310	SSF144059	ImpE-like
APY29_01315	SSF160719	gpW/gp25-like
APY29_01330	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_01330	SSF81923	Double Clp-N motif
APY29_01335	SSF53098	Ribonuclease H-like
APY29_01340	SSF46689	Homeodomain-like
APY29_01350	SSF50405	Actin-crosslinking proteins
APY29_01360	SSF51101	Mannose-binding lectins
APY29_01360	SSF56219	DNase I-like
APY29_01365	SSF53254	Phosphoglycerate mutase-like
APY29_01380	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
APY29_01380	SSF88946	Sigma2 domain of RNA polymerase sigma factors
APY29_01385	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
APY29_01385	SSF88946	Sigma2 domain of RNA polymerase sigma factors
APY29_01390	SSF48452	TPR-like
APY29_01390	SSF56112	Protein kinase-like (PK-like)
APY29_01400	SSF48452	TPR-like
APY29_01400	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_01405	SSF69255	gp5 N-terminal domain-like
APY29_01405	SSF69279	Phage tail proteins
APY29_01405	SSF69349	Phage fibre proteins
APY29_01415	SSF49879	SMAD/FHA domain
APY29_01425	SSF103088	OmpA-like
APY29_01440	SSF81606	PP2C-like
APY29_01445	SSF56112	Protein kinase-like (PK-like)
APY29_01445	SSF56436	C-type lectin-like
APY29_01460	SSF51126	Pectin lyase-like
APY29_01475	SSF47807	5' to 3' exonuclease, C-terminal subdomain
APY29_01475	SSF53098	Ribonuclease H-like
APY29_01475	SSF56672	DNA/RNA polymerases
APY29_01475	SSF88723	PIN domain-like
APY29_01485	SSF102886	Coproporphyrinogen III oxidase
APY29_01500	SSF53474	alpha/beta-Hydrolases
APY29_01500	SSF82171	DPP6 N-terminal domain-like
APY29_01505	SSF56801	Acetyl-CoA synthetase-like
APY29_01515	SSF55298	YjgF-like
APY29_01520	SSF51905	FAD/NAD(P)-binding domain
APY29_01525	SSF47336	ACP-like
APY29_01535	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
APY29_01540	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
APY29_01565	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
APY29_01570	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
APY29_01580	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_01590	SSF51905	FAD/NAD(P)-binding domain
APY29_01595	SSF53448	Nucleotide-diphospho-sugar transferases
APY29_01600	SSF53901	Thiolase-like
APY29_01605	SSF53901	Thiolase-like
APY29_01610	SSF160191	YcgL-like
APY29_01615	SSF48403	Ankyrin repeat
APY29_01620	SSF52788	Phosphotyrosine protein phosphatases I
APY29_01625	SSF48208	Six-hairpin glycosidases
APY29_01630	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_01630	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
APY29_01635	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_01640	SSF51069	Carbonic anhydrase
APY29_01645	SSF158791	MgtE N-terminal domain-like
APY29_01645	SSF161093	MgtE membrane domain-like
APY29_01645	SSF54631	CBS-domain pair
APY29_01650	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_01650	SSF52210	Succinyl-CoA synthetase domains
APY29_01650	SSF55729	Acyl-CoA N-acyltransferases (Nat)
APY29_01650	SSF56059	Glutathione synthetase ATP-binding domain-like
APY29_01660	SSF48168	R1 subunit of ribonucleotide reductase, N-terminal domain
APY29_01660	SSF51998	PFL-like glycyl radical enzymes
APY29_01665	SSF47240	Ferritin-like
APY29_01670	SSF52218	Flavoproteins
APY29_01675	SSF52833	Thioredoxin-like
APY29_01685	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
APY29_01695	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
APY29_01695	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_01710	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_01715	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
APY29_01715	SSF63380	Riboflavin synthase domain-like
APY29_01720	SSF46689	Homeodomain-like
APY29_01720	SSF52317	Class I glutamine amidotransferase-like
APY29_01730	SSF56935	Porins
APY29_01740	SSF161111	Cation efflux protein transmembrane domain-like
APY29_01760	SSF47413	lambda repressor-like DNA-binding domains
APY29_01765	SSF53474	alpha/beta-Hydrolases
APY29_01770	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_01780	SSF74653	TolA/TonB C-terminal domain
APY29_01785	SSF51905	FAD/NAD(P)-binding domain
APY29_01790	SSF51197	Clavaminate synthase-like
APY29_01800	SSF56935	Porins
APY29_01810	SSF47616	GST C-terminal domain-like
APY29_01810	SSF52833	Thioredoxin-like
APY29_01815	SSF53474	alpha/beta-Hydrolases
APY29_01815	SSF82171	DPP6 N-terminal domain-like
APY29_01825	SSF46689	Homeodomain-like
APY29_01830	SSF53098	Ribonuclease H-like
APY29_01855	SSF51569	Aldolase
APY29_01865	SSF46785	"Winged helix" DNA-binding domain
APY29_01865	SSF53850	Periplasmic binding protein-like II
APY29_01870	SSF54060	His-Me finger endonucleases
APY29_01875	SSF52218	Flavoproteins
APY29_01875	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
APY29_01875	SSF63380	Riboflavin synthase domain-like
APY29_01880	SSF82171	DPP6 N-terminal domain-like
APY29_01885	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_01885	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
APY29_01900	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_01905	SSF56634	Heme-dependent catalase-like
APY29_01910	SSF48403	Ankyrin repeat
APY29_01920	SSF51395	FMN-linked oxidoreductases
APY29_01930	SSF52172	CheY-like
APY29_01935	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_01935	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_01950	SSF55486	Metalloproteases ("zincins"), catalytic domain
APY29_01960	SSF46785	"Winged helix" DNA-binding domain
APY29_01960	SSF50037	C-terminal domain of transcriptional repressors
APY29_01960	SSF55681	Class II aaRS and biotin synthetases
APY29_01965	SSF53067	Actin-like ATPase domain
APY29_01970	SSF110997	Sporulation related repeat
APY29_01985	SSF53098	Ribonuclease H-like
APY29_01990	SSF46689	Homeodomain-like
APY29_01995	SSF56349	DNA breaking-rejoining enzymes
APY29_02000	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_02005	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_02015	SSF103196	Roadblock/LC7 domain
APY29_02020	SSF103196	Roadblock/LC7 domain
APY29_02025	SSF52768	Arginase/deacetylase
APY29_02040	SSF69047	Hypothetical protein YjbJ
APY29_02045	SSF160113	YegP-like
APY29_02045	SSF52374	Nucleotidylyl transferase
APY29_02050	SSF56281	Metallo-hydrolase/oxidoreductase
APY29_02055	SSF52025	PA domain
APY29_02055	SSF53187	Zn-dependent exopeptidases
APY29_02065	SSF103481	Multidrug resistance efflux transporter EmrE
APY29_02070	SSF103481	Multidrug resistance efflux transporter EmrE
APY29_02075	SSF53474	alpha/beta-Hydrolases
APY29_02090	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_02095	SSF111369	HlyD-like secretion proteins
APY29_02100	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_02105	SSF46894	C-terminal effector domain of the bipartite response regulators
APY29_02105	SSF52172	CheY-like
APY29_02110	SSF52317	Class I glutamine amidotransferase-like
APY29_02115	SSF81342	Transmembrane di-heme cytochromes
APY29_02120	SSF56634	Heme-dependent catalase-like
APY29_02125	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
APY29_02125	SSF88946	Sigma2 domain of RNA polymerase sigma factors
APY29_02135	SSF53187	Zn-dependent exopeptidases
APY29_02140	SSF56784	HAD-like
APY29_02165	SSF50156	PDZ domain-like
APY29_02165	SSF50494	Trypsin-like serine proteases
APY29_02185	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_02185	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_02190	SSF46894	C-terminal effector domain of the bipartite response regulators
APY29_02190	SSF52172	CheY-like
APY29_02195	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_02225	SSF53474	alpha/beta-Hydrolases
APY29_02235	SSF103365	Hypothetical protein PH1602
APY29_02240	SSF117892	Band 7/SPFH domain
APY29_02255	SSF46689	Homeodomain-like
APY29_02260	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
APY29_02260	SSF54292	2Fe-2S ferredoxin-like
APY29_02260	SSF63380	Riboflavin synthase domain-like
APY29_02270	SSF141868	EAL domain-like
APY29_02280	SSF50814	Lipocalins
APY29_02285	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_02285	SSF54211	Ribosomal protein S5 domain 2-like
APY29_02295	SSF54913	GlnB-like
APY29_02300	SSF51445	(Trans)glycosidases
APY29_02300	SSF55545	beta-N-acetylhexosaminidase-like domain
APY29_02305	SSF56112	Protein kinase-like (PK-like)
APY29_02310	SSF56925	OMPA-like
APY29_02325	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_02330	SSF50621	Alanine racemase C-terminal domain-like
APY29_02330	SSF51419	PLP-binding barrel
APY29_02340	SSF47336	ACP-like
APY29_02340	SSF52777	CoA-dependent acyltransferases
APY29_02340	SSF53474	alpha/beta-Hydrolases
APY29_02340	SSF56801	Acetyl-CoA synthetase-like
APY29_02345	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
APY29_02355	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_02365	SSF110997	Sporulation related repeat
APY29_02370	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
APY29_02370	SSF52374	Nucleotidylyl transferase
APY29_02370	SSF55190	Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
APY29_02375	SSF47781	RuvA domain 2-like
APY29_02380	SSF102645	CoaB-like
APY29_02380	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
APY29_02385	SSF51283	dUTPase-like
APY29_02395	SSF143422	Transposase IS200-like
APY29_02405	SSF53448	Nucleotide-diphospho-sugar transferases
APY29_02410	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_02420	SSF110849	ParB/Sulfiredoxin
APY29_02425	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_02435	SSF53271	PRTase-like
APY29_02440	SSF56219	DNase I-like
APY29_02445	SSF103473	MFS general substrate transporter
APY29_02455	SSF53067	Actin-like ATPase domain
APY29_02460	SSF51261	Duplicated hybrid motif
APY29_02465	SSF52374	Nucleotidylyl transferase
APY29_02465	SSF55174	Alpha-L RNA-binding motif
APY29_02500	SSF51730	FAD-linked oxidoreductase
APY29_02500	SSF53720	ALDH-like
APY29_02500	SSF81935	N-terminal domain of bifunctional PutA protein
APY29_02510	SSF49503	Cupredoxins
APY29_02510	SSF81464	Cytochrome c oxidase subunit II-like, transmembrane region
APY29_02515	SSF81442	Cytochrome c oxidase subunit I-like
APY29_02520	SSF110111	Ctag/Cox11
APY29_02525	SSF81452	Cytochrome c oxidase subunit III-like
APY29_02540	SSF52833	Thioredoxin-like
APY29_02555	SSF52833	Thioredoxin-like
APY29_02565	SSF117023	DNA primase DnaG, C-terminal domain
APY29_02565	SSF56731	DNA primase core
APY29_02565	SSF57783	Zinc beta-ribbon
APY29_02575	SSF89095	GatB/YqeY motif
APY29_02585	SSF53067	Actin-like ATPase domain
APY29_02590	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
APY29_02595	SSF51445	(Trans)glycosidases
APY29_02595	SSF52279	Beta-D-glucan exohydrolase, C-terminal domain
APY29_02600	SSF50952	Soluble quinoprotein glucose dehydrogenase
APY29_02630	SSF51604	Enolase C-terminal domain-like
APY29_02630	SSF54826	Enolase N-terminal domain-like
APY29_02635	SSF54001	Cysteine proteinases
APY29_02640	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
APY29_02645	SSF55166	Hedgehog/DD-peptidase
APY29_02660	SSF47473	EF-hand
APY29_02665	SSF47473	EF-hand
APY29_02670	SSF56784	HAD-like
APY29_02690	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
APY29_02690	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
APY29_02690	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
APY29_02695	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
APY29_02695	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
APY29_02695	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
APY29_02700	SSF111369	HlyD-like secretion proteins
APY29_02705	SSF53187	Zn-dependent exopeptidases
APY29_02705	SSF55031	Bacterial exopeptidase dimerisation domain
APY29_02710	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
APY29_02715	SSF54106	LysM domain
APY29_02725	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
APY29_02735	SSF46785	"Winged helix" DNA-binding domain
APY29_02735	SSF53850	Periplasmic binding protein-like II
APY29_02750	SSF50249	Nucleic acid-binding proteins
APY29_02750	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_02750	SSF68912	Rho N-terminal domain-like
APY29_02755	SSF52833	Thioredoxin-like
APY29_02760	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_02765	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_02775	SSF52172	CheY-like
APY29_02780	SSF52141	Uracil-DNA glycosylase-like
APY29_02785	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
APY29_02785	SSF88946	Sigma2 domain of RNA polymerase sigma factors
APY29_02795	SSF51905	FAD/NAD(P)-binding domain
APY29_02810	SSF47616	GST C-terminal domain-like
APY29_02810	SSF52833	Thioredoxin-like
APY29_02815	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_02840	SSF52096	ClpP/crotonase
APY29_02850	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_02865	SSF55821	YrdC/RibB
APY29_02870	SSF56712	Prokaryotic type I DNA topoisomerase
APY29_02875	SSF55277	GYF domain
APY29_02880	SSF54523	Pili subunits
APY29_02890	SSF102405	MCP/YpsA-like
APY29_02895	SSF54106	LysM domain
APY29_02900	SSF56420	Peptide deformylase
APY29_02905	SSF50486	FMT C-terminal domain-like
APY29_02905	SSF53328	Formyltransferase
APY29_02910	SSF48013	NusB-like
APY29_02910	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_02925	SSF53448	Nucleotide-diphospho-sugar transferases
APY29_02930	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
APY29_02945	SSF142695	RibA-like
APY29_02955	SSF55729	Acyl-CoA N-acyltransferases (Nat)
APY29_02965	SSF69500	DTD-like
APY29_02970	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
APY29_02970	SSF88946	Sigma2 domain of RNA polymerase sigma factors
APY29_02985	SSF56349	DNA breaking-rejoining enzymes
APY29_02990	SSF46955	Putative DNA-binding domain
APY29_03010	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_03015	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_03020	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_03025	SSF53649	Alkaline phosphatase-like
APY29_03035	SSF46689	Homeodomain-like
APY29_03040	SSF53098	Ribonuclease H-like
APY29_03050	SSF55920	Creatinase/aminopeptidase
APY29_03090	SSF54909	Dimeric alpha+beta barrel
APY29_03095	SSF52218	Flavoproteins
APY29_03100	SSF46785	"Winged helix" DNA-binding domain
APY29_03100	SSF53850	Periplasmic binding protein-like II
APY29_03105	SSF53474	alpha/beta-Hydrolases
APY29_03115	SSF53187	Zn-dependent exopeptidases
APY29_03120	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_03135	SSF56935	Porins
APY29_03145	SSF103088	OmpA-like
APY29_03180	SSF50129	GroES-like
APY29_03180	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_03195	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_03195	SSF90123	ABC transporter transmembrane region
APY29_03200	SSF51445	(Trans)glycosidases
APY29_03205	SSF51971	Nucleotide-binding domain
APY29_03205	SSF54373	FAD-linked reductases, C-terminal domain
APY29_03210	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
APY29_03215	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_03220	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_03250	SSF46689	Homeodomain-like
APY29_03250	SSF52172	CheY-like
APY29_03250	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_03260	SSF52172	CheY-like
APY29_03285	SSF47240	Ferritin-like
APY29_03290	SSF47240	Ferritin-like
APY29_03300	SSF46689	Homeodomain-like
APY29_03305	SSF53098	Ribonuclease H-like
APY29_03310	SSF51971	Nucleotide-binding domain
APY29_03315	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_03320	SSF52172	CheY-like
APY29_03350	SSF55486	Metalloproteases ("zincins"), catalytic domain
APY29_03355	SSF53448	Nucleotide-diphospho-sugar transferases
APY29_03360	SSF51430	NAD(P)-linked oxidoreductase
APY29_03365	SSF52218	Flavoproteins
APY29_03370	SSF46785	"Winged helix" DNA-binding domain
APY29_03370	SSF53850	Periplasmic binding protein-like II
APY29_03380	SSF53213	LigB-like
APY29_03385	SSF102114	Radical SAM enzymes
APY29_03385	SSF47781	RuvA domain 2-like
APY29_03390	SSF52141	Uracil-DNA glycosylase-like
APY29_03395	SSF82153	FAS1 domain
APY29_03405	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_03435	SSF103088	OmpA-like
APY29_03445	SSF141488	YdhA-like
APY29_03450	SSF51316	Mss4-like
APY29_03460	SSF46785	"Winged helix" DNA-binding domain
APY29_03460	SSF54909	Dimeric alpha+beta barrel
APY29_03465	SSF51905	FAD/NAD(P)-binding domain
APY29_03465	SSF54373	FAD-linked reductases, C-terminal domain
APY29_03470	SSF50621	Alanine racemase C-terminal domain-like
APY29_03470	SSF51419	PLP-binding barrel
APY29_03490	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_03490	SSF52172	CheY-like
APY29_03490	SSF55785	PYP-like sensor domain (PAS domain)
APY29_03490	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_03500	SSF50952	Soluble quinoprotein glucose dehydrogenase
APY29_03510	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_03515	SSF55120	Pseudouridine synthase
APY29_03520	SSF56784	HAD-like
APY29_03525	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_03540	SSF53474	alpha/beta-Hydrolases
APY29_03545	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_03545	SSF52172	CheY-like
APY29_03545	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_03555	SSF89963	YajQ-like
APY29_03560	SSF103481	Multidrug resistance efflux transporter EmrE
APY29_03565	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_03565	SSF55021	ACT-like
APY29_03570	SSF161098	MetI-like
APY29_03575	SSF53850	Periplasmic binding protein-like II
APY29_03585	SSF46689	Homeodomain-like
APY29_03590	SSF53098	Ribonuclease H-like
APY29_03605	SSF56925	OMPA-like
APY29_03610	SSF52141	Uracil-DNA glycosylase-like
APY29_03620	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
APY29_03620	SSF51230	Single hybrid motif
APY29_03620	SSF52777	CoA-dependent acyltransferases
APY29_03630	SSF51230	Single hybrid motif
APY29_03630	SSF51905	FAD/NAD(P)-binding domain
APY29_03630	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
APY29_03650	SSF81336	F1F0 ATP synthase subunit A
APY29_03655	SSF81333	F1F0 ATP synthase subunit C
APY29_03660	SSF81573	F1F0 ATP synthase subunit B, membrane domain
APY29_03665	SSF47928	N-terminal domain of the delta subunit of the F1F0-ATP synthase
APY29_03670	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
APY29_03670	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
APY29_03670	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_03675	SSF52943	ATP synthase (F1-ATPase), gamma subunit
APY29_03680	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
APY29_03680	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
APY29_03680	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_03685	SSF46604	Epsilon subunit of F1F0-ATP synthase C-terminal domain
APY29_03685	SSF51344	Epsilon subunit of F1F0-ATP synthase N-terminal domain
APY29_03690	SSF48600	Chorismate mutase II
APY29_03700	SSF51161	Trimeric LpxA-like enzymes
APY29_03700	SSF53448	Nucleotide-diphospho-sugar transferases
APY29_03705	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_03705	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_03710	SSF46689	Homeodomain-like
APY29_03710	SSF52172	CheY-like
APY29_03710	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_03715	SSF50156	PDZ domain-like
APY29_03730	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_03740	SSF53697	SIS domain
APY29_03740	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
APY29_03755	SSF53098	Ribonuclease H-like
APY29_03760	SSF46689	Homeodomain-like
APY29_03765	SSF47090	PGBD-like
APY29_03765	SSF53955	Lysozyme-like
APY29_03775	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
APY29_03785	SSF49503	Cupredoxins
APY29_03795	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
APY29_03800	SSF55486	Metalloproteases ("zincins"), catalytic domain
APY29_03810	SSF53901	Thiolase-like
APY29_03815	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
APY29_03820	SSF100879	Lesion bypass DNA polymerase (Y-family), little finger domain
APY29_03820	SSF56672	DNA/RNA polymerases
APY29_03825	SSF56784	HAD-like
APY29_03830	SSF56935	Porins
APY29_03835	SSF53474	alpha/beta-Hydrolases
APY29_03845	SSF55781	GAF domain-like
APY29_03850	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_03860	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
APY29_03865	SSF56935	Porins
APY29_03870	SSF47672	Transferrin receptor-like dimerisation domain
APY29_03870	SSF52025	PA domain
APY29_03870	SSF53187	Zn-dependent exopeptidases
APY29_03875	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_03880	SSF56529	FAH
APY29_03885	SSF47616	GST C-terminal domain-like
APY29_03885	SSF52833	Thioredoxin-like
APY29_03890	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_03900	SSF103088	OmpA-like
APY29_03910	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
APY29_03910	SSF54631	CBS-domain pair
APY29_03915	SSF53383	PLP-dependent transferases
APY29_03925	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
APY29_03935	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_03940	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_03940	SSF56112	Protein kinase-like (PK-like)
APY29_03945	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
APY29_03950	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_03955	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_03960	SSF46689	Homeodomain-like
APY29_03965	SSF53098	Ribonuclease H-like
APY29_03975	SSF53098	Ribonuclease H-like
APY29_03980	SSF46689	Homeodomain-like
APY29_03995	SSF51905	FAD/NAD(P)-binding domain
APY29_04005	SSF53448	Nucleotide-diphospho-sugar transferases
APY29_04010	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_04015	SSF52402	Adenine nucleotide alpha hydrolases-like
APY29_04015	SSF52467	DHS-like NAD/FAD-binding domain
APY29_04020	SSF52402	Adenine nucleotide alpha hydrolases-like
APY29_04025	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_04030	SSF53448	Nucleotide-diphospho-sugar transferases
APY29_04035	SSF51182	RmlC-like cupins
APY29_04040	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_04045	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
APY29_04045	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_04045	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
APY29_04050	SSF51182	RmlC-like cupins
APY29_04050	SSF53448	Nucleotide-diphospho-sugar transferases
APY29_04055	SSF53738	Phosphoglucomutase, first 3 domains
APY29_04055	SSF55957	Phosphoglucomutase, C-terminal domain
APY29_04060	SSF100950	NagB/RpiA/CoA transferase-like
APY29_04065	SSF100950	NagB/RpiA/CoA transferase-like
APY29_04070	SSF51905	FAD/NAD(P)-binding domain
APY29_04070	SSF54373	FAD-linked reductases, C-terminal domain
APY29_04070	SSF54862	4Fe-4S ferredoxins
APY29_04075	SSF51197	Clavaminate synthase-like
APY29_04080	SSF159594	XCC0632-like
APY29_04090	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_04105	SSF81273	H-NS histone-like proteins
APY29_04110	SSF52954	Class II aaRS ABD-related
APY29_04110	SSF55681	Class II aaRS and biotin synthetases
APY29_04110	SSF55826	YbaK/ProRS associated domain
APY29_04125	SSF102220	DNA polymerase III psi subunit
APY29_04130	SSF55729	Acyl-CoA N-acyltransferases (Nat)
APY29_04135	SSF51126	Pectin lyase-like
APY29_04140	SSF48435	Bacterial muramidases
APY29_04140	SSF53955	Lysozyme-like
APY29_04150	SSF46589	tRNA-binding arm
APY29_04150	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
APY29_04150	SSF50677	ValRS/IleRS/LeuRS editing domain
APY29_04150	SSF52374	Nucleotidylyl transferase
APY29_04155	SSF102400	DNA polymerase III chi subunit
APY29_04190	SSF47823	lambda integrase-like, N-terminal domain
APY29_04190	SSF56349	DNA breaking-rejoining enzymes
APY29_04195	SSF52833	Thioredoxin-like
APY29_04195	SSF54423	DsbC/DsbG N-terminal domain-like
APY29_04200	SSF109736	FGAM synthase PurL, linker domain
APY29_04200	SSF52317	Class I glutamine amidotransferase-like
APY29_04200	SSF55326	PurM N-terminal domain-like
APY29_04200	SSF56042	PurM C-terminal domain-like
APY29_04200	SSF82697	PurS-like
APY29_04205	SSF101967	Adhesin YadA, collagen-binding domain
APY29_04205	SSF54523	Pili subunits
APY29_04210	SSF52743	Subtilisin-like
APY29_04215	SSF101967	Adhesin YadA, collagen-binding domain
APY29_04215	SSF54523	Pili subunits
APY29_04220	SSF52743	Subtilisin-like
APY29_04225	SSF160246	EspE N-terminal domain-like
APY29_04225	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_04235	SSF54523	Pili subunits
APY29_04240	SSF54523	Pili subunits
APY29_04255	SSF158544	GspK insert domain-like
APY29_04260	SSF53067	Actin-like ATPase domain
APY29_04280	SSF46689	Homeodomain-like
APY29_04285	SSF53098	Ribonuclease H-like
APY29_04290	SSF53448	Nucleotide-diphospho-sugar transferases
APY29_04295	SSF46785	"Winged helix" DNA-binding domain
APY29_04295	SSF64288	Chorismate lyase-like
APY29_04310	SSF56112	Protein kinase-like (PK-like)
APY29_04315	SSF53448	Nucleotide-diphospho-sugar transferases
APY29_04325	SSF160246	EspE N-terminal domain-like
APY29_04325	SSF53448	Nucleotide-diphospho-sugar transferases
APY29_04335	SSF51445	(Trans)glycosidases
APY29_04345	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
APY29_04345	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
APY29_04360	SSF141371	PilZ domain-like
APY29_04360	SSF53448	Nucleotide-diphospho-sugar transferases
APY29_04370	SSF48208	Six-hairpin glycosidases
APY29_04375	SSF48452	TPR-like
APY29_04395	SSF52833	Thioredoxin-like
APY29_04400	SSF56420	Peptide deformylase
APY29_04405	SSF82549	DAK1/DegV-like
APY29_04415	SSF49452	Starch-binding domain-like
APY29_04415	SSF49785	Galactose-binding domain-like
APY29_04415	SSF74650	Galactose mutarotase-like
APY29_04425	SSF51338	Composite domain of metallo-dependent hydrolases
APY29_04425	SSF51556	Metallo-dependent hydrolases
APY29_04430	SSF51338	Composite domain of metallo-dependent hydrolases
APY29_04430	SSF51556	Metallo-dependent hydrolases
APY29_04435	SSF48452	TPR-like
APY29_04440	SSF69318	Integrin alpha N-terminal domain
APY29_04445	SSF52821	Rhodanese/Cell cycle control phosphatase
APY29_04445	SSF52833	Thioredoxin-like
APY29_04445	SSF89360	HesB-like domain
APY29_04450	SSF88713	Glycoside hydrolase/deacetylase
APY29_04455	SSF56935	Porins
APY29_04460	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_04465	SSF52266	SGNH hydrolase
APY29_04470	SSF53383	PLP-dependent transferases
APY29_04475	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_04475	SSF90123	ABC transporter transmembrane region
APY29_04495	SSF53098	Ribonuclease H-like
APY29_04500	SSF46689	Homeodomain-like
APY29_04505	SSF46689	Homeodomain-like
APY29_04510	SSF53098	Ribonuclease H-like
APY29_04515	SSF51120	beta-Roll
APY29_04520	SSF53098	Ribonuclease H-like
APY29_04525	SSF46689	Homeodomain-like
APY29_04535	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_04545	SSF52317	Class I glutamine amidotransferase-like
APY29_04550	SSF51011	Glycosyl hydrolase domain
APY29_04550	SSF51445	(Trans)glycosidases
APY29_04555	SSF56935	Porins
APY29_04560	SSF103473	MFS general substrate transporter
APY29_04565	SSF47413	lambda repressor-like DNA-binding domains
APY29_04565	SSF53822	Periplasmic binding protein-like I
APY29_04570	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_04580	SSF56935	Porins
APY29_04585	SSF52172	CheY-like
APY29_04590	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_04590	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_04595	SSF53850	Periplasmic binding protein-like II
APY29_04600	SSF46894	C-terminal effector domain of the bipartite response regulators
APY29_04600	SSF52172	CheY-like
APY29_04610	SSF54427	NTF2-like
APY29_04615	SSF51430	NAD(P)-linked oxidoreductase
APY29_04625	SSF46785	"Winged helix" DNA-binding domain
APY29_04625	SSF53850	Periplasmic binding protein-like II
APY29_04630	SSF53850	Periplasmic binding protein-like II
APY29_04635	SSF103473	MFS general substrate transporter
APY29_04640	SSF103190	Sensory domain-like
APY29_04640	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_04640	SSF52172	CheY-like
APY29_04640	SSF55785	PYP-like sensor domain (PAS domain)
APY29_04640	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_04650	SSF56935	Porins
APY29_04655	SSF118215	Proton glutamate symport protein
APY29_04660	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_04660	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
APY29_04660	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
APY29_04675	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
APY29_04690	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
APY29_04695	SSF56954	Outer membrane efflux proteins (OEP)
APY29_04700	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_04705	SSF46689	Homeodomain-like
APY29_04705	SSF48498	Tetracyclin repressor-like, C-terminal domain
APY29_04710	SSF55073	Nucleotide cyclase
APY29_04710	SSF63829	Calcium-dependent phosphotriesterase
APY29_04715	SSF46785	"Winged helix" DNA-binding domain
APY29_04715	SSF53850	Periplasmic binding protein-like II
APY29_04720	SSF53732	Aconitase iron-sulfur domain
APY29_04725	SSF52016	LeuD/IlvD-like
APY29_04730	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
APY29_04735	SSF110921	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
APY29_04735	SSF51569	Aldolase
APY29_04740	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
APY29_04745	SSF55021	ACT-like
APY29_04750	SSF52467	DHS-like NAD/FAD-binding domain
APY29_04750	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
APY29_04755	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
APY29_04755	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_04760	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
APY29_04765	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
APY29_04770	SSF56935	Porins
APY29_04780	SSF46894	C-terminal effector domain of the bipartite response regulators
APY29_04780	SSF50969	YVTN repeat-like/Quinoprotein amine dehydrogenase
APY29_04780	SSF82171	DPP6 N-terminal domain-like
APY29_04785	SSF46689	Homeodomain-like
APY29_04790	SSF56935	Porins
APY29_04795	SSF109604	HD-domain/PDEase-like
APY29_04795	SSF52172	CheY-like
APY29_04800	SSF50324	Inorganic pyrophosphatase
APY29_04815	SSF46689	Homeodomain-like
APY29_04820	SSF53098	Ribonuclease H-like
APY29_04830	SSF53784	Phosphofructokinase
APY29_04835	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_04840	SSF51984	MurCD N-terminal domain
APY29_04840	SSF53244	MurD-like peptide ligases, peptide-binding domain
APY29_04840	SSF53623	MurD-like peptide ligases, catalytic domain
APY29_04845	SSF88697	PUA domain-like
APY29_04855	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
APY29_04860	SSF56112	Protein kinase-like (PK-like)
APY29_04865	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_04870	SSF81324	Voltage-gated potassium channels
APY29_04875	SSF53383	PLP-dependent transferases
APY29_04880	SSF56784	HAD-like
APY29_04885	SSF56935	Porins
APY29_04890	SSF51905	FAD/NAD(P)-binding domain
APY29_04890	SSF54373	FAD-linked reductases, C-terminal domain
APY29_04895	SSF46626	Cytochrome c
APY29_04900	SSF55298	YjgF-like
APY29_04905	SSF53383	PLP-dependent transferases
APY29_04910	SSF49503	Cupredoxins
APY29_04920	SSF53383	PLP-dependent transferases
APY29_04925	SSF49452	Starch-binding domain-like
APY29_04925	SSF56935	Porins
APY29_04930	SSF51391	Thiamin phosphate synthase
APY29_04935	SSF57802	Rubredoxin-like
APY29_04940	SSF48452	TPR-like
APY29_04950	SSF100950	NagB/RpiA/CoA transferase-like
APY29_04950	SSF75445	D-ribose-5-phosphate isomerase (RpiA), lid domain
APY29_04955	SSF88697	PUA domain-like
APY29_04960	SSF100950	NagB/RpiA/CoA transferase-like
APY29_04965	SSF102829	Cell division protein ZapA-like
APY29_04975	SSF101327	YgfB-like
APY29_04980	SSF53092	Creatinase/prolidase N-terminal domain
APY29_04980	SSF55920	Creatinase/aminopeptidase
APY29_04990	SSF55920	Creatinase/aminopeptidase
APY29_05005	SSF102114	Radical SAM enzymes
APY29_05010	SSF52972	ITPase-like
APY29_05015	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
APY29_05020	SSF54211	Ribosomal protein S5 domain 2-like
APY29_05020	SSF55666	Ribonuclease PH domain 2-like
APY29_05030	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_05035	SSF63562	RPB6/omega subunit-like
APY29_05040	SSF109604	HD-domain/PDEase-like
APY29_05040	SSF55021	ACT-like
APY29_05040	SSF81271	TGS-like
APY29_05040	SSF81301	Nucleotidyltransferase
APY29_05045	SSF55298	YjgF-like
APY29_05050	SSF50249	Nucleic acid-binding proteins
APY29_05050	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_05055	SSF53590	Nucleoside hydrolase
APY29_05060	SSF143800	L28p-like
APY29_05065	SSF48256	Citrate synthase
APY29_05075	SSF53955	Lysozyme-like
APY29_05075	SSF56601	beta-lactamase/transpeptidase-like
APY29_05080	SSF53067	Actin-like ATPase domain
APY29_05105	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_05120	SSF53300	vWA-like
APY29_05125	SSF48452	TPR-like
APY29_05125	SSF53300	vWA-like
APY29_05135	SSF118215	Proton glutamate symport protein
APY29_05140	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
APY29_05140	SSF52922	TK C-terminal domain-like
APY29_05145	SSF53474	alpha/beta-Hydrolases
APY29_05160	SSF56935	Porins
APY29_05175	SSF46689	Homeodomain-like
APY29_05180	SSF53098	Ribonuclease H-like
APY29_05190	SSF51695	PLC-like phosphodiesterases
APY29_05195	SSF100950	NagB/RpiA/CoA transferase-like
APY29_05200	SSF46785	"Winged helix" DNA-binding domain
APY29_05205	SSF74653	TolA/TonB C-terminal domain
APY29_05215	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_05220	SSF161098	MetI-like
APY29_05225	SSF53850	Periplasmic binding protein-like II
APY29_05230	SSF56281	Metallo-hydrolase/oxidoreductase
APY29_05235	SSF48537	Phospholipase C/P1 nuclease
APY29_05240	SSF56925	OMPA-like
APY29_05245	SSF56925	OMPA-like
APY29_05250	SSF54427	NTF2-like
APY29_05255	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_05255	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
APY29_05275	SSF53748	Phosphoglycerate kinase
APY29_05285	SSF50800	PK beta-barrel domain-like
APY29_05285	SSF51621	Phosphoenolpyruvate/pyruvate domain
APY29_05285	SSF52935	PK C-terminal domain-like
APY29_05290	SSF51569	Aldolase
APY29_05295	SSF52949	Macro domain-like
APY29_05305	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
APY29_05310	SSF53790	Tetrapyrrole methylase
APY29_05315	SSF46785	"Winged helix" DNA-binding domain
APY29_05315	SSF53850	Periplasmic binding protein-like II
APY29_05330	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_05330	SSF55781	GAF domain-like
APY29_05330	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_05340	SSF56935	Porins
APY29_05350	SSF52402	Adenine nucleotide alpha hydrolases-like
APY29_05355	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
APY29_05355	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
APY29_05360	SSF52218	Flavoproteins
APY29_05360	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
APY29_05360	SSF63380	Riboflavin synthase domain-like
APY29_05365	SSF52402	Adenine nucleotide alpha hydrolases-like
APY29_05370	SSF50447	Translation proteins
APY29_05370	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
APY29_05370	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_05375	SSF111369	HlyD-like secretion proteins
APY29_05380	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
APY29_05380	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
APY29_05380	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
APY29_05390	SSF46689	Homeodomain-like
APY29_05395	SSF53098	Ribonuclease H-like
APY29_05410	SSF55486	Metalloproteases ("zincins"), catalytic domain
APY29_05410	SSF63737	Leukotriene A4 hydrolase N-terminal domain
APY29_05415	SSF55729	Acyl-CoA N-acyltransferases (Nat)
APY29_05420	SSF55315	L30e-like
APY29_05420	SSF75217	alpha/beta knot
APY29_05425	SSF53474	alpha/beta-Hydrolases
APY29_05435	SSF51445	(Trans)glycosidases
APY29_05440	SSF49303	beta-Galactosidase/glucuronidase domain
APY29_05440	SSF49785	Galactose-binding domain-like
APY29_05440	SSF49899	Concanavalin A-like lectins/glucanases
APY29_05440	SSF51445	(Trans)glycosidases
APY29_05445	SSF56935	Porins
APY29_05450	SSF47413	lambda repressor-like DNA-binding domains
APY29_05450	SSF53822	Periplasmic binding protein-like I
APY29_05460	SSF53187	Zn-dependent exopeptidases
APY29_05465	SSF81330	Gated mechanosensitive channel
APY29_05480	SSF50022	ISP domain
APY29_05485	SSF116726	TrkA C-terminal domain-like
APY29_05490	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_05495	SSF110399	ThiG-like
APY29_05500	SSF54285	MoaD/ThiS
APY29_05505	SSF103515	Autotransporter
APY29_05505	SSF52266	SGNH hydrolase
APY29_05515	SSF56349	DNA breaking-rejoining enzymes
APY29_05525	SSF46689	Homeodomain-like
APY29_05530	SSF53098	Ribonuclease H-like
APY29_05535	SSF46689	Homeodomain-like
APY29_05540	SSF46785	"Winged helix" DNA-binding domain
APY29_05555	SSF50199	Staphylococcal nuclease
APY29_05565	SSF81273	H-NS histone-like proteins
APY29_05570	SSF51011	Glycosyl hydrolase domain
APY29_05570	SSF51445	(Trans)glycosidases
APY29_05570	SSF81296	E set domains
APY29_05575	SSF56059	Glutathione synthetase ATP-binding domain-like
APY29_05585	SSF52172	CheY-like
APY29_05590	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_05590	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_05600	SSF46689	Homeodomain-like
APY29_05605	SSF53098	Ribonuclease H-like
APY29_05610	SSF53098	Ribonuclease H-like
APY29_05615	SSF46689	Homeodomain-like
APY29_05625	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_05640	SSF54523	Pili subunits
APY29_05645	SSF160246	EspE N-terminal domain-like
APY29_05645	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_05655	SSF46689	Homeodomain-like
APY29_05655	SSF52172	CheY-like
APY29_05655	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_05665	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_05665	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_05670	SSF52210	Succinyl-CoA synthetase domains
APY29_05670	SSF56059	Glutathione synthetase ATP-binding domain-like
APY29_05675	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_05675	SSF52210	Succinyl-CoA synthetase domains
APY29_05685	SSF52980	Restriction endonuclease-like
APY29_05690	SSF52402	Adenine nucleotide alpha hydrolases-like
APY29_05690	SSF56317	Carbon-nitrogen hydrolase
APY29_05695	SSF51445	(Trans)glycosidases
APY29_05700	SSF48452	TPR-like
APY29_05705	SSF55120	Pseudouridine synthase
APY29_05705	SSF55174	Alpha-L RNA-binding motif
APY29_05710	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
APY29_05725	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
APY29_05730	SSF50998	Quinoprotein alcohol dehydrogenase-like
APY29_05735	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
APY29_05740	SSF48208	Six-hairpin glycosidases
APY29_05745	SSF56784	HAD-like
APY29_05750	SSF56935	Porins
APY29_05780	SSF47616	GST C-terminal domain-like
APY29_05780	SSF52833	Thioredoxin-like
APY29_05785	SSF82771	GIY-YIG endonuclease
APY29_05790	SSF56935	Porins
APY29_05800	SSF51430	NAD(P)-linked oxidoreductase
APY29_05805	SSF53850	Periplasmic binding protein-like II
APY29_05810	SSF161098	MetI-like
APY29_05815	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_05820	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_05820	SSF81923	Double Clp-N motif
APY29_05825	SSF56935	Porins
APY29_05840	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_05855	SSF52317	Class I glutamine amidotransferase-like
APY29_05855	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_05860	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_05865	SSF52733	Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
APY29_05870	SSF53254	Phosphoglycerate mutase-like
APY29_05885	SSF50621	Alanine racemase C-terminal domain-like
APY29_05885	SSF51419	PLP-binding barrel
APY29_05895	SSF103473	MFS general substrate transporter
APY29_05905	SSF56059	Glutathione synthetase ATP-binding domain-like
APY29_05910	SSF56935	Porins
APY29_05915	SSF51621	Phosphoenolpyruvate/pyruvate domain
APY29_05925	SSF53474	alpha/beta-Hydrolases
APY29_05935	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_05945	SSF56935	Porins
APY29_05955	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
APY29_05965	SSF56935	Porins
APY29_05980	SSF46785	"Winged helix" DNA-binding domain
APY29_05980	SSF53850	Periplasmic binding protein-like II
APY29_05985	SSF56601	beta-lactamase/transpeptidase-like
APY29_05995	SSF56935	Porins
APY29_06000	SSF103473	MFS general substrate transporter
APY29_06015	SSF50249	Nucleic acid-binding proteins
APY29_06015	SSF55261	GAD domain-like
APY29_06015	SSF55681	Class II aaRS and biotin synthetases
APY29_06020	SSF55729	Acyl-CoA N-acyltransferases (Nat)
APY29_06025	SSF53474	alpha/beta-Hydrolases
APY29_06030	SSF75625	YebC-like
APY29_06035	SSF53098	Ribonuclease H-like
APY29_06040	SSF46929	DNA helicase RuvA subunit, C-terminal domain
APY29_06040	SSF47781	RuvA domain 2-like
APY29_06040	SSF50249	Nucleic acid-binding proteins
APY29_06055	SSF46785	"Winged helix" DNA-binding domain
APY29_06055	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_06060	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
APY29_06075	SSF74653	TolA/TonB C-terminal domain
APY29_06080	SSF52964	TolB, N-terminal domain
APY29_06080	SSF69304	Tricorn protease N-terminal domain
APY29_06085	SSF103088	OmpA-like
APY29_06090	SSF48452	TPR-like
APY29_06095	SSF102114	Radical SAM enzymes
APY29_06105	SSF52402	Adenine nucleotide alpha hydrolases-like
APY29_06110	SSF55785	PYP-like sensor domain (PAS domain)
APY29_06110	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_06115	SSF52172	CheY-like
APY29_06120	SSF46785	"Winged helix" DNA-binding domain
APY29_06120	SSF53850	Periplasmic binding protein-like II
APY29_06130	SSF158472	HAMP domain-like
APY29_06130	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
APY29_06145	SSF55120	Pseudouridine synthase
APY29_06145	SSF55174	Alpha-L RNA-binding motif
APY29_06155	SSF52172	CheY-like
APY29_06165	SSF47819	HRDC-like
APY29_06165	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_06170	SSF47240	Ferritin-like
APY29_06175	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_06180	SSF56935	Porins
APY29_06185	SSF53067	Actin-like ATPase domain
APY29_06190	SSF53474	alpha/beta-Hydrolases
APY29_06200	SSF102114	Radical SAM enzymes
APY29_06210	SSF48613	Heme oxygenase-like
APY29_06215	SSF56281	Metallo-hydrolase/oxidoreductase
APY29_06220	SSF109604	HD-domain/PDEase-like
APY29_06220	SSF55021	ACT-like
APY29_06220	SSF81271	TGS-like
APY29_06220	SSF81301	Nucleotidyltransferase
APY29_06225	SSF48452	TPR-like
APY29_06230	SSF53448	Nucleotide-diphospho-sugar transferases
APY29_06230	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
APY29_06235	SSF53955	Lysozyme-like
APY29_06235	SSF56601	beta-lactamase/transpeptidase-like
APY29_06240	SSF48452	TPR-like
APY29_06245	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_06250	SSF53067	Actin-like ATPase domain
APY29_06255	SSF101478	ADP-ribosylglycohydrolase
APY29_06260	SSF74653	TolA/TonB C-terminal domain
APY29_06265	SSF52440	PreATP-grasp domain
APY29_06265	SSF56059	Glutathione synthetase ATP-binding domain-like
APY29_06270	SSF52172	CheY-like
APY29_06275	SSF52172	CheY-like
APY29_06280	SSF50341	CheW-like
APY29_06285	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
APY29_06295	SSF52738	Methylesterase CheB, C-terminal domain
APY29_06300	SSF50341	CheW-like
APY29_06305	SSF55729	Acyl-CoA N-acyltransferases (Nat)
APY29_06315	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
APY29_06320	SSF110395	CutC-like
APY29_06325	SSF52058	L domain-like
APY29_06330	SSF50939	Sialidases
APY29_06350	SSF49785	Galactose-binding domain-like
APY29_06350	SSF51445	(Trans)glycosidases
APY29_06355	SSF48208	Six-hairpin glycosidases
APY29_06360	SSF48208	Six-hairpin glycosidases
APY29_06365	SSF46689	Homeodomain-like
APY29_06370	SSF53098	Ribonuclease H-like
APY29_06390	SSF53098	Ribonuclease H-like
APY29_06395	SSF46689	Homeodomain-like
APY29_06405	SSF51445	(Trans)glycosidases
APY29_06405	SSF52279	Beta-D-glucan exohydrolase, C-terminal domain
APY29_06405	SSF56988	Anthrax protective antigen
APY29_06410	SSF49303	beta-Galactosidase/glucuronidase domain
APY29_06410	SSF49785	Galactose-binding domain-like
APY29_06410	SSF51445	(Trans)glycosidases
APY29_06415	SSF51445	(Trans)glycosidases
APY29_06415	SSF55545	beta-N-acetylhexosaminidase-like domain
APY29_06420	SSF51445	(Trans)glycosidases
APY29_06425	SSF51445	(Trans)glycosidases
APY29_06430	SSF56935	Porins
APY29_06440	SSF53067	Actin-like ATPase domain
APY29_06445	SSF75217	alpha/beta knot
APY29_06445	SSF88697	PUA domain-like
APY29_06450	SSF53383	PLP-dependent transferases
APY29_06455	SSF55811	Nudix
APY29_06460	SSF56655	Carbohydrate phosphatase
APY29_06465	SSF101386	all-alpha NTP pyrophosphatases
APY29_06470	SSF103481	Multidrug resistance efflux transporter EmrE
APY29_06480	SSF101790	Aminomethyltransferase beta-barrel domain
APY29_06480	SSF103025	Folate-binding domain
APY29_06485	SSF51230	Single hybrid motif
APY29_06500	SSF56601	beta-lactamase/transpeptidase-like
APY29_06505	SSF103473	MFS general substrate transporter
APY29_06515	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
APY29_06515	SSF56645	Acyl-CoA dehydrogenase NM domain-like
APY29_06520	SSF53474	alpha/beta-Hydrolases
APY29_06525	SSF46689	Homeodomain-like
APY29_06525	SSF48498	Tetracyclin repressor-like, C-terminal domain
APY29_06535	SSF53098	Ribonuclease H-like
APY29_06540	SSF46689	Homeodomain-like
APY29_06545	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_06550	SSF53098	Ribonuclease H-like
APY29_06555	SSF46689	Homeodomain-like
APY29_06560	SSF46689	Homeodomain-like
APY29_06565	SSF53098	Ribonuclease H-like
APY29_06570	SSF56935	Porins
APY29_06580	SSF118352	HSP33 redox switch-like
APY29_06580	SSF64397	Hsp33 domain
APY29_06585	SSF53955	Lysozyme-like
APY29_06590	SSF53448	Nucleotide-diphospho-sugar transferases
APY29_06595	SSF54631	CBS-domain pair
APY29_06610	SSF50447	Translation proteins
APY29_06610	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_06610	SSF54980	EF-G C-terminal domain-like
APY29_06615	SSF51261	Duplicated hybrid motif
APY29_06620	SSF53474	alpha/beta-Hydrolases
APY29_06625	SSF53383	PLP-dependent transferases
APY29_06630	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_06630	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
APY29_06640	SSF143548	Serine metabolism enzymes domain
APY29_06645	SSF52833	Thioredoxin-like
APY29_06650	SSF101874	YceI-like
APY29_06655	SSF81342	Transmembrane di-heme cytochromes
APY29_06660	SSF101874	YceI-like
APY29_06665	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_06665	SSF50998	Quinoprotein alcohol dehydrogenase-like
APY29_06665	SSF52172	CheY-like
APY29_06665	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_06675	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_06675	SSF52172	CheY-like
APY29_06675	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_06675	SSF63829	Calcium-dependent phosphotriesterase
APY29_06680	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_06680	SSF52172	CheY-like
APY29_06680	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_06680	SSF63829	Calcium-dependent phosphotriesterase
APY29_06690	SSF51726	UROD/MetE-like
APY29_06695	SSF142921	WGR domain-like
APY29_06700	SSF56796	Dehydroquinate synthase-like
APY29_06705	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_06710	SSF50475	FMN-binding split barrel
APY29_06725	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_06725	SSF81324	Voltage-gated potassium channels
APY29_06745	SSF52440	PreATP-grasp domain
APY29_06745	SSF56059	Glutathione synthetase ATP-binding domain-like
APY29_06755	SSF103473	MFS general substrate transporter
APY29_06760	SSF53098	Ribonuclease H-like
APY29_06765	SSF46689	Homeodomain-like
APY29_06775	SSF46955	Putative DNA-binding domain
APY29_06780	SSF55486	Metalloproteases ("zincins"), catalytic domain
APY29_06790	SSF56935	Porins
APY29_06800	SSF51197	Clavaminate synthase-like
APY29_06805	SSF51905	FAD/NAD(P)-binding domain
APY29_06810	SSF56281	Metallo-hydrolase/oxidoreductase
APY29_06840	SSF46894	C-terminal effector domain of the bipartite response regulators
APY29_06840	SSF75516	Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
APY29_06850	SSF53474	alpha/beta-Hydrolases
APY29_06860	SSF53098	Ribonuclease H-like
APY29_06865	SSF46689	Homeodomain-like
APY29_06880	SSF51556	Metallo-dependent hydrolases
APY29_06895	SSF53474	alpha/beta-Hydrolases
APY29_06900	SSF158791	MgtE N-terminal domain-like
APY29_06900	SSF161093	MgtE membrane domain-like
APY29_06900	SSF54631	CBS-domain pair
APY29_06910	SSF55594	HPr-like
APY29_06915	SSF53062	PTS system fructose IIA component-like
APY29_06920	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_06925	SSF53795	PEP carboxykinase-like
APY29_06925	SSF75138	HprK N-terminal domain-like
APY29_06930	SSF55804	Phoshotransferase/anion transport protein
APY29_06935	SSF69754	Ribosome binding protein Y (YfiA homologue)
APY29_06945	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_06960	SSF56784	HAD-like
APY29_06965	SSF53697	SIS domain
APY29_06970	SSF82657	BolA-like
APY29_06975	SSF55205	EPT/RTPC-like
APY29_06995	SSF53328	Formyltransferase
APY29_07010	SSF55326	PurM N-terminal domain-like
APY29_07010	SSF56042	PurM C-terminal domain-like
APY29_07025	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_07030	SSF53448	Nucleotide-diphospho-sugar transferases
APY29_07035	SSF56112	Protein kinase-like (PK-like)
APY29_07045	SSF53187	Zn-dependent exopeptidases
APY29_07050	SSF47781	RuvA domain 2-like
APY29_07055	SSF51182	RmlC-like cupins
APY29_07060	SSF47473	EF-hand
APY29_07065	SSF52218	Flavoproteins
APY29_07065	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
APY29_07065	SSF63380	Riboflavin synthase domain-like
APY29_07070	SSF143631	ApbE-like
APY29_07090	SSF81901	HCP-like
APY29_07095	SSF51197	Clavaminate synthase-like
APY29_07100	SSF56935	Porins
APY29_07105	SSF50022	ISP domain
APY29_07110	SSF55729	Acyl-CoA N-acyltransferases (Nat)
APY29_07115	SSF53383	PLP-dependent transferases
APY29_07120	SSF101960	Stabilizer of iron transporter SufD
APY29_07125	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_07130	SSF101960	Stabilizer of iron transporter SufD
APY29_07135	SSF46785	"Winged helix" DNA-binding domain
APY29_07140	SSF82199	SET domain
APY29_07145	SSF52317	Class I glutamine amidotransferase-like
APY29_07165	SSF51261	Duplicated hybrid motif
APY29_07170	SSF47729	IHF-like DNA-binding proteins
APY29_07175	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
APY29_07175	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_07180	SSF51419	PLP-binding barrel
APY29_07185	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_07190	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_07200	SSF117396	TM1631-like
APY29_07205	SSF48150	DNA-glycosylase
APY29_07215	SSF143456	VC0467-like
APY29_07220	SSF53098	Ribonuclease H-like
APY29_07225	SSF53671	Aspartate/ornithine carbamoyltransferase
APY29_07230	SSF82784	OsmC-like
APY29_07240	SSF54506	Diaminopimelate epimerase-like
APY29_07245	SSF54506	Diaminopimelate epimerase-like
APY29_07250	SSF50621	Alanine racemase C-terminal domain-like
APY29_07250	SSF51419	PLP-binding barrel
APY29_07250	SSF53633	Carbamate kinase-like
APY29_07250	SSF55021	ACT-like
APY29_07265	SSF53244	MurD-like peptide ligases, peptide-binding domain
APY29_07265	SSF53623	MurD-like peptide ligases, catalytic domain
APY29_07270	SSF53474	alpha/beta-Hydrolases
APY29_07275	SSF48576	Terpenoid synthases
APY29_07280	SSF50249	Nucleic acid-binding proteins
APY29_07290	SSF50129	GroES-like
APY29_07290	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_07295	SSF47741	CO dehydrogenase ISP C-domain like
APY29_07295	SSF54292	2Fe-2S ferredoxin-like
APY29_07300	SSF55447	CO dehydrogenase flavoprotein C-terminal domain-like
APY29_07300	SSF56176	FAD-binding/transporter-associated domain-like
APY29_07305	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
APY29_07305	SSF56003	Molybdenum cofactor-binding domain
APY29_07340	SSF53474	alpha/beta-Hydrolases
APY29_07345	SSF48403	Ankyrin repeat
APY29_07350	SSF56784	HAD-like
APY29_07365	SSF51182	RmlC-like cupins
APY29_07370	SSF82784	OsmC-like
APY29_07380	SSF51182	RmlC-like cupins
APY29_07395	SSF53254	Phosphoglycerate mutase-like
APY29_07405	SSF55486	Metalloproteases ("zincins"), catalytic domain
APY29_07410	SSF56024	Phospholipase D/nuclease
APY29_07415	SSF52172	CheY-like
APY29_07415	SSF52738	Methylesterase CheB, C-terminal domain
APY29_07420	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
APY29_07420	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_07425	SSF141868	EAL domain-like
APY29_07425	SSF52172	CheY-like
APY29_07430	SSF50341	CheW-like
APY29_07435	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
APY29_07440	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
APY29_07440	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_07440	SSF50341	CheW-like
APY29_07440	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_07445	SSF52091	SpoIIaa-like
APY29_07470	SSF141259	CarD-like
APY29_07470	SSF143517	TRCF domain-like
APY29_07470	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_07475	SSF55729	Acyl-CoA N-acyltransferases (Nat)
APY29_07480	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_07485	SSF46894	C-terminal effector domain of the bipartite response regulators
APY29_07485	SSF52172	CheY-like
APY29_07490	SSF103190	Sensory domain-like
APY29_07490	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_07490	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_07500	SSF54001	Cysteine proteinases
APY29_07515	SSF55729	Acyl-CoA N-acyltransferases (Nat)
APY29_07520	SSF56317	Carbon-nitrogen hydrolase
APY29_07530	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
APY29_07530	SSF52374	Nucleotidylyl transferase
APY29_07535	SSF46785	"Winged helix" DNA-binding domain
APY29_07540	SSF46689	Homeodomain-like
APY29_07545	SSF111369	HlyD-like secretion proteins
APY29_07550	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
APY29_07550	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
APY29_07550	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
APY29_07555	SSF56954	Outer membrane efflux proteins (OEP)
APY29_07560	SSF46689	Homeodomain-like
APY29_07560	SSF48498	Tetracyclin repressor-like, C-terminal domain
APY29_07565	SSF51430	NAD(P)-linked oxidoreductase
APY29_07570	SSF46785	"Winged helix" DNA-binding domain
APY29_07570	SSF53850	Periplasmic binding protein-like II
APY29_07575	SSF51182	RmlC-like cupins
APY29_07580	SSF46689	Homeodomain-like
APY29_07590	SSF46785	"Winged helix" DNA-binding domain
APY29_07590	SSF53850	Periplasmic binding protein-like II
APY29_07595	SSF103473	MFS general substrate transporter
APY29_07610	SSF49785	Galactose-binding domain-like
APY29_07610	SSF52743	Subtilisin-like
APY29_07620	SSF49785	Galactose-binding domain-like
APY29_07620	SSF52743	Subtilisin-like
APY29_07625	SSF56935	Porins
APY29_07630	SSF56935	Porins
APY29_07645	SSF50129	GroES-like
APY29_07645	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_07650	SSF81340	Clc chloride channel
APY29_07655	SSF53649	Alkaline phosphatase-like
APY29_07660	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
APY29_07660	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
APY29_07670	SSF52096	ClpP/crotonase
APY29_07685	SSF161084	MAPEG domain-like
APY29_07695	SSF55174	Alpha-L RNA-binding motif
APY29_07705	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
APY29_07705	SSF88946	Sigma2 domain of RNA polymerase sigma factors
APY29_07710	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_07715	SSF141868	EAL domain-like
APY29_07715	SSF55073	Nucleotide cyclase
APY29_07715	SSF55785	PYP-like sensor domain (PAS domain)
APY29_07720	SSF55120	Pseudouridine synthase
APY29_07720	SSF55174	Alpha-L RNA-binding motif
APY29_07725	SSF55073	Nucleotide cyclase
APY29_07725	SSF55781	GAF domain-like
APY29_07730	SSF103481	Multidrug resistance efflux transporter EmrE
APY29_07735	SSF117396	TM1631-like
APY29_07745	SSF89562	RraA-like
APY29_07750	SSF56601	beta-lactamase/transpeptidase-like
APY29_07765	SSF46894	C-terminal effector domain of the bipartite response regulators
APY29_07765	SSF52172	CheY-like
APY29_07770	SSF56954	Outer membrane efflux proteins (OEP)
APY29_07780	SSF111369	HlyD-like secretion proteins
APY29_07785	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
APY29_07785	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
APY29_07785	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
APY29_07790	SSF159941	MM3350-like
APY29_07795	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_07795	SSF90123	ABC transporter transmembrane region
APY29_07805	SSF51316	Mss4-like
APY29_07830	SSF103481	Multidrug resistance efflux transporter EmrE
APY29_07835	SSF50891	Cyclophilin-like
APY29_07870	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
APY29_07880	SSF52833	Thioredoxin-like
APY29_07890	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
APY29_07890	SSF50677	ValRS/IleRS/LeuRS editing domain
APY29_07890	SSF52374	Nucleotidylyl transferase
APY29_07900	SSF48019	post-AAA+ oligomerization domain-like
APY29_07900	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_07905	SSF52374	Nucleotidylyl transferase
APY29_07910	SSF81301	Nucleotidyltransferase
APY29_07920	SSF75217	alpha/beta knot
APY29_07925	SSF74653	TolA/TonB C-terminal domain
APY29_07930	SSF49452	Starch-binding domain-like
APY29_07930	SSF56935	Porins
APY29_07940	SSF52972	ITPase-like
APY29_07945	SSF50249	Nucleic acid-binding proteins
APY29_07960	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
APY29_07965	SSF158710	PSPTO4464-like
APY29_07970	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
APY29_07980	SSF55486	Metalloproteases ("zincins"), catalytic domain
APY29_07985	SSF53098	Ribonuclease H-like
APY29_07990	SSF46689	Homeodomain-like
APY29_07995	SSF48576	Terpenoid synthases
APY29_08000	SSF116842	XseB-like
APY29_08005	SSF52402	Adenine nucleotide alpha hydrolases-like
APY29_08005	SSF56037	PheT/TilS domain
APY29_08005	SSF82829	MesJ substrate recognition domain-like
APY29_08015	SSF53649	Alkaline phosphatase-like
APY29_08020	SSF118215	Proton glutamate symport protein
APY29_08025	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_08030	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
APY29_08035	SSF54001	Cysteine proteinases
APY29_08040	SSF54001	Cysteine proteinases
APY29_08045	SSF54534	FKBP-like
APY29_08055	SSF51905	FAD/NAD(P)-binding domain
APY29_08055	SSF54373	FAD-linked reductases, C-terminal domain
APY29_08060	SSF51905	FAD/NAD(P)-binding domain
APY29_08060	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
APY29_08065	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
APY29_08070	SSF144091	Rhomboid-like
APY29_08075	SSF55486	Metalloproteases ("zincins"), catalytic domain
APY29_08080	SSF55486	Metalloproteases ("zincins"), catalytic domain
APY29_08085	SSF55486	Metalloproteases ("zincins"), catalytic domain
APY29_08090	SSF51905	FAD/NAD(P)-binding domain
APY29_08095	SSF49452	Starch-binding domain-like
APY29_08095	SSF56935	Porins
APY29_08100	SSF56935	Porins
APY29_08105	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_08110	SSF51283	dUTPase-like
APY29_08125	SSF54197	HIT-like
APY29_08130	SSF53474	alpha/beta-Hydrolases
APY29_08140	SSF53098	Ribonuclease H-like
APY29_08145	SSF46689	Homeodomain-like
APY29_08155	SSF52743	Subtilisin-like
APY29_08160	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_08165	SSF47413	lambda repressor-like DNA-binding domains
APY29_08170	SSF89447	AbrB/MazE/MraZ-like
APY29_08175	SSF47413	lambda repressor-like DNA-binding domains
APY29_08180	SSF102114	Radical SAM enzymes
APY29_08185	SSF46557	GreA transcript cleavage protein, N-terminal domain
APY29_08185	SSF54534	FKBP-like
APY29_08200	SSF55811	Nudix
APY29_08210	SSF53955	Lysozyme-like
APY29_08210	SSF54106	LysM domain
APY29_08215	SSF46689	Homeodomain-like
APY29_08220	SSF53098	Ribonuclease H-like
APY29_08230	SSF52833	Thioredoxin-like
APY29_08235	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_08240	SSF103263	Chorismate synthase, AroC
APY29_08245	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_08245	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
APY29_08250	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_08250	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
APY29_08265	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
APY29_08270	SSF55120	Pseudouridine synthase
APY29_08275	SSF51366	Ribulose-phoshate binding barrel
APY29_08280	SSF46785	"Winged helix" DNA-binding domain
APY29_08280	SSF53850	Periplasmic binding protein-like II
APY29_08285	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
APY29_08295	SSF51366	Ribulose-phoshate binding barrel
APY29_08300	SSF52096	ClpP/crotonase
APY29_08305	SSF53738	Phosphoglucomutase, first 3 domains
APY29_08305	SSF55957	Phosphoglucomutase, C-terminal domain
APY29_08315	SSF51197	Clavaminate synthase-like
APY29_08320	SSF49464	Carboxypeptidase regulatory domain-like
APY29_08320	SSF49503	Cupredoxins
APY29_08325	SSF141868	EAL domain-like
APY29_08325	SSF158472	HAMP domain-like
APY29_08325	SSF55073	Nucleotide cyclase
APY29_08335	SSF46458	Globin-like
APY29_08340	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_08345	SSF51351	Triosephosphate isomerase (TIM)
APY29_08365	SSF56770	HydA/Nqo6-like
APY29_08370	SSF143243	Nqo5-like
APY29_08375	SSF56762	HydB/Nqo4-like
APY29_08380	SSF52833	Thioredoxin-like
APY29_08385	SSF140490	Nqo1C-terminal domain-like
APY29_08385	SSF142019	Nqo1 FMN-binding domain-like
APY29_08385	SSF142984	Nqo1 middle domain-like
APY29_08390	SSF50692	ADC-like
APY29_08390	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
APY29_08390	SSF54292	2Fe-2S ferredoxin-like
APY29_08390	SSF54862	4Fe-4S ferredoxins
APY29_08400	SSF54862	4Fe-4S ferredoxins
APY29_08435	SSF74942	YhbC-like, C-terminal domain
APY29_08435	SSF75420	YhbC-like, N-terminal domain
APY29_08440	SSF47794	Rad51 N-terminal domain-like
APY29_08440	SSF50249	Nucleic acid-binding proteins
APY29_08440	SSF54814	Prokaryotic type KH domain (KH-domain type II)
APY29_08440	SSF69705	Transcription factor NusA, N-terminal domain
APY29_08445	SSF46955	Putative DNA-binding domain
APY29_08445	SSF50447	Translation proteins
APY29_08445	SSF52156	Initiation factor IF2/eIF5b, domain 3
APY29_08445	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_08450	SSF89919	Ribosome-binding factor A, RbfA
APY29_08455	SSF55120	Pseudouridine synthase
APY29_08455	SSF88697	PUA domain-like
APY29_08460	SSF47060	S15/NS1 RNA-binding domain
APY29_08465	SSF46915	Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
APY29_08465	SSF50249	Nucleic acid-binding proteins
APY29_08465	SSF54211	Ribosomal protein S5 domain 2-like
APY29_08465	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
APY29_08465	SSF55666	Ribonuclease PH domain 2-like
APY29_08475	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
APY29_08475	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
APY29_08480	SSF158997	Trm112p-like
APY29_08485	SSF52255	N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
APY29_08490	SSF51246	Rudiment single hybrid motif
APY29_08490	SSF52440	PreATP-grasp domain
APY29_08490	SSF56059	Glutathione synthetase ATP-binding domain-like
APY29_08495	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
APY29_08495	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
APY29_08500	SSF52833	Thioredoxin-like
APY29_08505	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_08515	SSF49464	Carboxypeptidase regulatory domain-like
APY29_08515	SSF56935	Porins
APY29_08520	SSF102405	MCP/YpsA-like
APY29_08545	SSF54523	Pili subunits
APY29_08555	SSF54523	Pili subunits
APY29_08560	SSF46600	C-terminal UvrC-binding domain of UvrB
APY29_08560	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_08575	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_08585	SSF54427	NTF2-like
APY29_08600	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_08605	SSF53955	Lysozyme-like
APY29_08620	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_08635	SSF69318	Integrin alpha N-terminal domain
APY29_08640	SSF47090	PGBD-like
APY29_08655	SSF46689	Homeodomain-like
APY29_08660	SSF46689	Homeodomain-like
APY29_08665	SSF53098	Ribonuclease H-like
APY29_08675	SSF51445	(Trans)glycosidases
APY29_08680	SSF48208	Six-hairpin glycosidases
APY29_08685	SSF103473	MFS general substrate transporter
APY29_08690	SSF51011	Glycosyl hydrolase domain
APY29_08690	SSF51445	(Trans)glycosidases
APY29_08695	SSF47413	lambda repressor-like DNA-binding domains
APY29_08695	SSF53822	Periplasmic binding protein-like I
APY29_08700	SSF52954	Class II aaRS ABD-related
APY29_08700	SSF55186	ThrRS/AlaRS common domain
APY29_08700	SSF55681	Class II aaRS and biotin synthetases
APY29_08700	SSF81271	TGS-like
APY29_08705	SSF54364	Translation initiation factor IF3, N-terminal domain
APY29_08705	SSF55200	Translation initiation factor IF3, C-terminal domain
APY29_08710	SSF143034	L35p-like
APY29_08715	SSF74731	Ribosomal protein L20
APY29_08720	SSF46589	tRNA-binding arm
APY29_08720	SSF55681	Class II aaRS and biotin synthetases
APY29_08725	SSF46955	Putative DNA-binding domain
APY29_08725	SSF50249	Nucleic acid-binding proteins
APY29_08725	SSF54991	Anticodon-binding domain of PheRS
APY29_08725	SSF55681	Class II aaRS and biotin synthetases
APY29_08725	SSF56037	PheT/TilS domain
APY29_08730	SSF47729	IHF-like DNA-binding proteins
APY29_08735	SSF46955	Putative DNA-binding domain
APY29_08775	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
APY29_08780	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
APY29_08790	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
APY29_08805	SSF51182	RmlC-like cupins
APY29_08815	SSF53901	Thiolase-like
APY29_08820	SSF56281	Metallo-hydrolase/oxidoreductase
APY29_08825	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_08830	SSF53448	Nucleotide-diphospho-sugar transferases
APY29_08840	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
APY29_08845	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
APY29_08845	SSF52922	TK C-terminal domain-like
APY29_08855	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
APY29_08855	SSF56645	Acyl-CoA dehydrogenase NM domain-like
APY29_08860	SSF117070	LEA14-like
APY29_08865	SSF50814	Lipocalins
APY29_08880	SSF82771	GIY-YIG endonuclease
APY29_08895	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_08895	SSF52172	CheY-like
APY29_08895	SSF55785	PYP-like sensor domain (PAS domain)
APY29_08895	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_08900	SSF111148	YggX-like
APY29_08905	SSF48150	DNA-glycosylase
APY29_08905	SSF55811	Nudix
APY29_08910	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_08915	SSF46689	Homeodomain-like
APY29_08915	SSF55785	PYP-like sensor domain (PAS domain)
APY29_08920	SSF54506	Diaminopimelate epimerase-like
APY29_08925	SSF51905	FAD/NAD(P)-binding domain
APY29_08925	SSF54373	FAD-linked reductases, C-terminal domain
APY29_08930	SSF54292	2Fe-2S ferredoxin-like
APY29_08935	SSF51905	FAD/NAD(P)-binding domain
APY29_08940	SSF51569	Aldolase
APY29_08945	SSF53720	ALDH-like
APY29_08950	SSF53092	Creatinase/prolidase N-terminal domain
APY29_08950	SSF55920	Creatinase/aminopeptidase
APY29_08970	SSF53474	alpha/beta-Hydrolases
APY29_08970	SSF82171	DPP6 N-terminal domain-like
APY29_08990	SSF52743	Subtilisin-like
APY29_08990	SSF54897	Protease propeptides/inhibitors
APY29_08995	SSF48208	Six-hairpin glycosidases
APY29_09000	SSF56935	Porins
APY29_09005	SSF48208	Six-hairpin glycosidases
APY29_09005	SSF49785	Galactose-binding domain-like
APY29_09010	SSF75005	Arabinanase/levansucrase/invertase
APY29_09015	SSF53474	alpha/beta-Hydrolases
APY29_09015	SSF82171	DPP6 N-terminal domain-like
APY29_09020	SSF56935	Porins
APY29_09025	SSF48208	Six-hairpin glycosidases
APY29_09035	SSF53098	Ribonuclease H-like
APY29_09040	SSF46689	Homeodomain-like
APY29_09055	SSF110942	HSP90 C-terminal domain
APY29_09055	SSF54211	Ribosomal protein S5 domain 2-like
APY29_09055	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_09060	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_09065	SSF52374	Nucleotidylyl transferase
APY29_09075	SSF54862	4Fe-4S ferredoxins
APY29_09080	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
APY29_09090	SSF48208	Six-hairpin glycosidases
APY29_09090	SSF81296	E set domains
APY29_09095	SSF53271	PRTase-like
APY29_09100	SSF56935	Porins
APY29_09105	SSF50956	Thermostable phytase (3-phytase)
APY29_09110	SSF49363	Purple acid phosphatase, N-terminal domain
APY29_09110	SSF56300	Metallo-dependent phosphatases
APY29_09115	SSF46689	Homeodomain-like
APY29_09120	SSF53098	Ribonuclease H-like
APY29_09125	SSF53448	Nucleotide-diphospho-sugar transferases
APY29_09130	SSF53383	PLP-dependent transferases
APY29_09140	SSF46785	"Winged helix" DNA-binding domain
APY29_09140	SSF54909	Dimeric alpha+beta barrel
APY29_09145	SSF111337	QueA-like
APY29_09150	SSF51713	tRNA-guanine transglycosylase
APY29_09160	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
APY29_09165	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
APY29_09170	SSF46689	Homeodomain-like
APY29_09175	SSF53098	Ribonuclease H-like
APY29_09195	SSF46689	Homeodomain-like
APY29_09200	SSF53098	Ribonuclease H-like
APY29_09220	SSF52794	PTS system IIB component-like
APY29_09225	SSF53613	Ribokinase-like
APY29_09230	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
APY29_09230	SSF51621	Phosphoenolpyruvate/pyruvate domain
APY29_09230	SSF52009	Phosphohistidine domain
APY29_09230	SSF55594	HPr-like
APY29_09230	SSF55804	Phoshotransferase/anion transport protein
APY29_09235	SSF47413	lambda repressor-like DNA-binding domains
APY29_09235	SSF53822	Periplasmic binding protein-like I
APY29_09240	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
APY29_09240	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
APY29_09240	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
APY29_09245	SSF111369	HlyD-like secretion proteins
APY29_09250	SSF46689	Homeodomain-like
APY29_09250	SSF48498	Tetracyclin repressor-like, C-terminal domain
APY29_09255	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_09255	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
APY29_09260	SSF103473	MFS general substrate transporter
APY29_09265	SSF109604	HD-domain/PDEase-like
APY29_09265	SSF52172	CheY-like
APY29_09270	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
APY29_09270	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_09270	SSF52172	CheY-like
APY29_09270	SSF55785	PYP-like sensor domain (PAS domain)
APY29_09270	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_09280	SSF109709	KorB DNA-binding domain-like
APY29_09285	SSF53383	PLP-dependent transferases
APY29_09295	SSF103473	MFS general substrate transporter
APY29_09300	SSF53927	Cytidine deaminase-like
APY29_09305	SSF50692	ADC-like
APY29_09305	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
APY29_09310	SSF46785	"Winged helix" DNA-binding domain
APY29_09315	SSF103473	MFS general substrate transporter
APY29_09320	SSF47188	Hemerythrin-like
APY29_09325	SSF52172	CheY-like
APY29_09325	SSF55073	Nucleotide cyclase
APY29_09330	SSF51905	FAD/NAD(P)-binding domain
APY29_09335	SSF54368	Glutamine synthetase, N-terminal domain
APY29_09335	SSF55931	Glutamine synthetase/guanido kinase
APY29_09340	SSF52317	Class I glutamine amidotransferase-like
APY29_09345	SSF54368	Glutamine synthetase, N-terminal domain
APY29_09345	SSF55931	Glutamine synthetase/guanido kinase
APY29_09350	SSF53383	PLP-dependent transferases
APY29_09355	SSF53850	Periplasmic binding protein-like II
APY29_09360	SSF111369	HlyD-like secretion proteins
APY29_09365	SSF103473	MFS general substrate transporter
APY29_09370	SSF56954	Outer membrane efflux proteins (OEP)
APY29_09375	SSF50331	MOP-like
APY29_09375	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_09380	SSF161098	MetI-like
APY29_09385	SSF161098	MetI-like
APY29_09395	SSF53720	ALDH-like
APY29_09400	SSF143865	CorA soluble domain-like
APY29_09400	SSF144083	Magnesium transport protein CorA, transmembrane region
APY29_09410	SSF54631	CBS-domain pair
APY29_09410	SSF56176	FAD-binding/transporter-associated domain-like
APY29_09420	SSF55486	Metalloproteases ("zincins"), catalytic domain
APY29_09430	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_09435	SSF102114	Radical SAM enzymes
APY29_09440	SSF47616	GST C-terminal domain-like
APY29_09440	SSF52833	Thioredoxin-like
APY29_09445	SSF46785	"Winged helix" DNA-binding domain
APY29_09450	SSF53955	Lysozyme-like
APY29_09455	SSF50022	ISP domain
APY29_09460	SSF81342	Transmembrane di-heme cytochromes
APY29_09460	SSF81648	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
APY29_09465	SSF46626	Cytochrome c
APY29_09470	SSF47616	GST C-terminal domain-like
APY29_09470	SSF52833	Thioredoxin-like
APY29_09475	SSF101738	SspB-like
APY29_09490	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_09495	SSF50486	FMT C-terminal domain-like
APY29_09500	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
APY29_09505	SSF50341	CheW-like
APY29_09510	SSF55073	Nucleotide cyclase
APY29_09510	SSF55781	GAF domain-like
APY29_09520	SSF53098	Ribonuclease H-like
APY29_09525	SSF46689	Homeodomain-like
APY29_09530	SSF53098	Ribonuclease H-like
APY29_09535	SSF46689	Homeodomain-like
APY29_09550	SSF56349	DNA breaking-rejoining enzymes
APY29_09560	SSF81273	H-NS histone-like proteins
APY29_09570	SSF50249	Nucleic acid-binding proteins
APY29_09570	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
APY29_09575	SSF47819	HRDC-like
APY29_09575	SSF53098	Ribonuclease H-like
APY29_09580	SSF56436	C-type lectin-like
APY29_09585	SSF53474	alpha/beta-Hydrolases
APY29_09595	SSF54862	4Fe-4S ferredoxins
APY29_09600	SSF53613	Ribokinase-like
APY29_09600	SSF64153	YjeF N-terminal domain-like
APY29_09605	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_09610	SSF53187	Zn-dependent exopeptidases
APY29_09615	SSF118116	DNA mismatch repair protein MutL
APY29_09615	SSF54211	Ribosomal protein S5 domain 2-like
APY29_09615	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_09635	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_09640	SSF52374	Nucleotidylyl transferase
APY29_09650	SSF141868	EAL domain-like
APY29_09650	SSF52172	CheY-like
APY29_09650	SSF55073	Nucleotide cyclase
APY29_09650	SSF55785	PYP-like sensor domain (PAS domain)
APY29_09655	SSF160996	HI0933 insert domain-like
APY29_09655	SSF51905	FAD/NAD(P)-binding domain
APY29_09660	SSF52980	Restriction endonuclease-like
APY29_09665	SSF50249	Nucleic acid-binding proteins
APY29_09670	SSF47616	GST C-terminal domain-like
APY29_09670	SSF52833	Thioredoxin-like
APY29_09675	SSF53474	alpha/beta-Hydrolases
APY29_09685	SSF53271	PRTase-like
APY29_09690	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_09695	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_09700	SSF52038	Barstar-related
APY29_09705	SSF53933	Microbial ribonucleases
APY29_09710	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
APY29_09710	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
APY29_09715	SSF56655	Carbohydrate phosphatase
APY29_09720	SSF75217	alpha/beta knot
APY29_09725	SSF53850	Periplasmic binding protein-like II
APY29_09730	SSF103190	Sensory domain-like
APY29_09730	SSF141868	EAL domain-like
APY29_09730	SSF158472	HAMP domain-like
APY29_09730	SSF55073	Nucleotide cyclase
APY29_09735	SSF102114	Radical SAM enzymes
APY29_09740	SSF50104	Translation proteins SH3-like domain
APY29_09740	SSF50249	Nucleic acid-binding proteins
APY29_09750	SSF51338	Composite domain of metallo-dependent hydrolases
APY29_09750	SSF51556	Metallo-dependent hydrolases
APY29_09755	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_09760	SSF56784	HAD-like
APY29_09765	SSF48576	Terpenoid synthases
APY29_09775	SSF53098	Ribonuclease H-like
APY29_09790	SSF50494	Trypsin-like serine proteases
APY29_09800	SSF50475	FMN-binding split barrel
APY29_09805	SSF56281	Metallo-hydrolase/oxidoreductase
APY29_09830	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
APY29_09835	SSF51261	Duplicated hybrid motif
APY29_09840	SSF51338	Composite domain of metallo-dependent hydrolases
APY29_09840	SSF51556	Metallo-dependent hydrolases
APY29_09855	SSF109635	DnaK suppressor protein DksA, alpha-hairpin domain
APY29_09855	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
APY29_09860	SSF103473	MFS general substrate transporter
APY29_09865	SSF82649	SufE/NifU
APY29_09870	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
APY29_09870	SSF52374	Nucleotidylyl transferase
APY29_09880	SSF53671	Aspartate/ornithine carbamoyltransferase
APY29_09885	SSF52402	Adenine nucleotide alpha hydrolases-like
APY29_09885	SSF69864	Argininosuccinate synthetase, C-terminal domain
APY29_09890	SSF55729	Acyl-CoA N-acyltransferases (Nat)
APY29_09895	SSF53187	Zn-dependent exopeptidases
APY29_09895	SSF55031	Bacterial exopeptidase dimerisation domain
APY29_09900	SSF53633	Carbamate kinase-like
APY29_09900	SSF55729	Acyl-CoA N-acyltransferases (Nat)
APY29_09905	SSF55729	Acyl-CoA N-acyltransferases (Nat)
APY29_09910	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_09910	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
APY29_09915	SSF48557	L-aspartase-like
APY29_09920	SSF54909	Dimeric alpha+beta barrel
APY29_09930	SSF53720	ALDH-like
APY29_09935	SSF49785	Galactose-binding domain-like
APY29_09935	SSF53474	alpha/beta-Hydrolases
APY29_09940	SSF103473	MFS general substrate transporter
APY29_09960	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_09960	SSF90123	ABC transporter transmembrane region
APY29_09965	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_09965	SSF90123	ABC transporter transmembrane region
APY29_09970	SSF50249	Nucleic acid-binding proteins
APY29_09975	SSF53474	alpha/beta-Hydrolases
APY29_09990	SSF52833	Thioredoxin-like
APY29_10000	SSF82093	Heme chaperone CcmE
APY29_10020	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_10025	SSF53383	PLP-dependent transferases
APY29_10030	SSF56317	Carbon-nitrogen hydrolase
APY29_10035	SSF50969	YVTN repeat-like/Quinoprotein amine dehydrogenase
APY29_10045	SSF55120	Pseudouridine synthase
APY29_10045	SSF55174	Alpha-L RNA-binding motif
APY29_10050	SSF46785	"Winged helix" DNA-binding domain
APY29_10060	SSF54909	Dimeric alpha+beta barrel
APY29_10065	SSF82657	BolA-like
APY29_10070	SSF47413	lambda repressor-like DNA-binding domains
APY29_10070	SSF53822	Periplasmic binding protein-like I
APY29_10075	SSF49452	Starch-binding domain-like
APY29_10075	SSF56935	Porins
APY29_10085	SSF53850	Periplasmic binding protein-like II
APY29_10090	SSF161098	MetI-like
APY29_10095	SSF161098	MetI-like
APY29_10100	SSF48208	Six-hairpin glycosidases
APY29_10100	SSF49785	Galactose-binding domain-like
APY29_10105	SSF56219	DNase I-like
APY29_10120	SSF56317	Carbon-nitrogen hydrolase
APY29_10125	SSF55909	Pentein
APY29_10135	SSF57840	Ribosomal protein L36
APY29_10140	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_10145	SSF50249	Nucleic acid-binding proteins
APY29_10150	SSF47729	IHF-like DNA-binding proteins
APY29_10160	SSF81901	HCP-like
APY29_10165	SSF64153	YjeF N-terminal domain-like
APY29_10170	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_10170	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_10175	SSF53448	Nucleotide-diphospho-sugar transferases
APY29_10180	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_10185	SSF158757	SMc04008-like
APY29_10190	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_10190	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
APY29_10195	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
APY29_10195	SSF54631	CBS-domain pair
APY29_10200	SSF52317	Class I glutamine amidotransferase-like
APY29_10200	SSF52402	Adenine nucleotide alpha hydrolases-like
APY29_10200	SSF54810	GMP synthetase C-terminal dimerisation domain
APY29_10205	SSF56349	DNA breaking-rejoining enzymes
APY29_10230	SSF53098	Ribonuclease H-like
APY29_10235	SSF46689	Homeodomain-like
APY29_10245	SSF50129	GroES-like
APY29_10245	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_10250	SSF53474	alpha/beta-Hydrolases
APY29_10255	SSF51430	NAD(P)-linked oxidoreductase
APY29_10260	SSF53474	alpha/beta-Hydrolases
APY29_10265	SSF46689	Homeodomain-like
APY29_10265	SSF48498	Tetracyclin repressor-like, C-terminal domain
APY29_10270	SSF46689	Homeodomain-like
APY29_10275	SSF53098	Ribonuclease H-like
APY29_10280	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_10285	SSF47598	Ribbon-helix-helix
APY29_10290	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_10305	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_10350	SSF46785	"Winged helix" DNA-binding domain
APY29_10350	SSF53850	Periplasmic binding protein-like II
APY29_10365	SSF103190	Sensory domain-like
APY29_10365	SSF158472	HAMP domain-like
APY29_10370	SSF46894	C-terminal effector domain of the bipartite response regulators
APY29_10370	SSF52172	CheY-like
APY29_10380	SSF46689	Homeodomain-like
APY29_10385	SSF52499	Isochorismatase-like hydrolases
APY29_10395	SSF53098	Ribonuclease H-like
APY29_10400	SSF53927	Cytidine deaminase-like
APY29_10405	SSF46785	"Winged helix" DNA-binding domain
APY29_10415	SSF53474	alpha/beta-Hydrolases
APY29_10430	SSF103473	MFS general substrate transporter
APY29_10435	SSF51338	Composite domain of metallo-dependent hydrolases
APY29_10435	SSF51556	Metallo-dependent hydrolases
APY29_10440	SSF50182	Sm-like ribonucleoproteins
APY29_10440	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
APY29_10440	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
APY29_10445	SSF51621	Phosphoenolpyruvate/pyruvate domain
APY29_10445	SSF52009	Phosphohistidine domain
APY29_10445	SSF56059	Glutathione synthetase ATP-binding domain-like
APY29_10460	SSF55811	Nudix
APY29_10465	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_10480	SSF53474	alpha/beta-Hydrolases
APY29_10495	SSF51905	FAD/NAD(P)-binding domain
APY29_10505	SSF158832	Tex N-terminal region-like
APY29_10505	SSF47781	RuvA domain 2-like
APY29_10505	SSF50249	Nucleic acid-binding proteins
APY29_10505	SSF53098	Ribonuclease H-like
APY29_10510	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_10510	SSF52172	CheY-like
APY29_10510	SSF55781	GAF domain-like
APY29_10510	SSF55785	PYP-like sensor domain (PAS domain)
APY29_10510	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_10515	SSF52172	CheY-like
APY29_10550	SSF46626	Cytochrome c
APY29_10555	SSF46626	Cytochrome c
APY29_10560	SSF111369	HlyD-like secretion proteins
APY29_10565	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
APY29_10565	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
APY29_10565	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
APY29_10575	SSF53098	Ribonuclease H-like
APY29_10580	SSF46689	Homeodomain-like
APY29_10585	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
APY29_10590	SSF51569	Aldolase
APY29_10595	SSF143975	IlvD/EDD N-terminal domain-like
APY29_10595	SSF52016	LeuD/IlvD-like
APY29_10600	SSF100950	NagB/RpiA/CoA transferase-like
APY29_10605	SSF53067	Actin-like ATPase domain
APY29_10610	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_10610	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
APY29_10615	SSF50331	MOP-like
APY29_10615	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_10620	SSF103025	Folate-binding domain
APY29_10625	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
APY29_10630	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
APY29_10635	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
APY29_10635	SSF51905	FAD/NAD(P)-binding domain
APY29_10635	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
APY29_10645	SSF46548	alpha-helical ferredoxin
APY29_10645	SSF54292	2Fe-2S ferredoxin-like
APY29_10650	SSF109910	YgfY-like
APY29_10665	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_10670	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_10675	SSF56281	Metallo-hydrolase/oxidoreductase
APY29_10690	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_10690	SSF90123	ABC transporter transmembrane region
APY29_10695	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_10700	SSF53448	Nucleotide-diphospho-sugar transferases
APY29_10705	SSF52788	Phosphotyrosine protein phosphatases I
APY29_10710	SSF101898	NHL repeat
APY29_10710	SSF52833	Thioredoxin-like
APY29_10715	SSF46600	C-terminal UvrC-binding domain of UvrB
APY29_10715	SSF47781	RuvA domain 2-like
APY29_10715	SSF82771	GIY-YIG endonuclease
APY29_10740	SSF56349	DNA breaking-rejoining enzymes
APY29_10745	SSF53098	Ribonuclease H-like
APY29_10750	SSF46689	Homeodomain-like
APY29_10760	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_10765	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_10805	SSF53474	alpha/beta-Hydrolases
APY29_10815	SSF46689	Homeodomain-like
APY29_10820	SSF53098	Ribonuclease H-like
APY29_10830	SSF46689	Homeodomain-like
APY29_10835	SSF53098	Ribonuclease H-like
APY29_10895	SSF103473	MFS general substrate transporter
APY29_10900	SSF46785	"Winged helix" DNA-binding domain
APY29_10900	SSF53850	Periplasmic binding protein-like II
APY29_10905	SSF52833	Thioredoxin-like
APY29_10910	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_10960	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_10990	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_11005	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_11090	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_11095	SSF56712	Prokaryotic type I DNA topoisomerase
APY29_11095	SSF57783	Zinc beta-ribbon
APY29_11100	SSF50249	Nucleic acid-binding proteins
APY29_11125	SSF110849	ParB/Sulfiredoxin
APY29_11135	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_11155	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_11160	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_11170	SSF46689	Homeodomain-like
APY29_11170	SSF53098	Ribonuclease H-like
APY29_11175	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_11185	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_11195	SSF56024	Phospholipase D/nuclease
APY29_11225	SSF53098	Ribonuclease H-like
APY29_11230	SSF46689	Homeodomain-like
APY29_11240	SSF56214	4'-phosphopantetheinyl transferase
APY29_11250	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
APY29_11250	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_11250	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
APY29_11255	SSF160996	HI0933 insert domain-like
APY29_11255	SSF51905	FAD/NAD(P)-binding domain
APY29_11260	SSF54534	FKBP-like
APY29_11270	SSF52821	Rhodanese/Cell cycle control phosphatase
APY29_11275	SSF46894	C-terminal effector domain of the bipartite response regulators
APY29_11275	SSF52172	CheY-like
APY29_11280	SSF50249	Nucleic acid-binding proteins
APY29_11285	SSF55120	Pseudouridine synthase
APY29_11285	SSF55174	Alpha-L RNA-binding motif
APY29_11300	SSF74653	TolA/TonB C-terminal domain
APY29_11305	SSF55248	PCD-like
APY29_11310	SSF117916	Fe-S cluster assembly (FSCA) domain-like
APY29_11310	SSF89360	HesB-like domain
APY29_11360	SSF46689	Homeodomain-like
APY29_11365	SSF53098	Ribonuclease H-like
APY29_11385	SSF50249	Nucleic acid-binding proteins
APY29_11410	SSF53098	Ribonuclease H-like
APY29_11415	SSF46689	Homeodomain-like
APY29_11435	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_11435	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
APY29_11440	SSF50952	Soluble quinoprotein glucose dehydrogenase
APY29_11450	SSF56601	beta-lactamase/transpeptidase-like
APY29_11455	SSF52172	CheY-like
APY29_11460	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_11475	SSF103515	Autotransporter
APY29_11475	SSF52743	Subtilisin-like
APY29_11480	SSF111369	HlyD-like secretion proteins
APY29_11485	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
APY29_11485	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
APY29_11485	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
APY29_11490	SSF46689	Homeodomain-like
APY29_11495	SSF53098	Ribonuclease H-like
APY29_11500	SSF56954	Outer membrane efflux proteins (OEP)
APY29_11505	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_11505	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_11510	SSF46894	C-terminal effector domain of the bipartite response regulators
APY29_11510	SSF52172	CheY-like
APY29_11515	SSF103515	Autotransporter
APY29_11515	SSF51126	Pectin lyase-like
APY29_11520	SSF141868	EAL domain-like
APY29_11520	SSF55073	Nucleotide cyclase
APY29_11520	SSF55781	GAF domain-like
APY29_11525	SSF49899	Concanavalin A-like lectins/glucanases
APY29_11530	SSF53187	Zn-dependent exopeptidases
APY29_11535	SSF47240	Ferritin-like
APY29_11555	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_11555	SSF53790	Tetrapyrrole methylase
APY29_11555	SSF75615	Siroheme synthase middle domains-like
APY29_11565	SSF53448	Nucleotide-diphospho-sugar transferases
APY29_11570	SSF53218	Molybdenum cofactor biosynthesis proteins
APY29_11570	SSF63867	MoeA C-terminal domain-like
APY29_11570	SSF63882	MoeA N-terminal region -like
APY29_11580	SSF56219	DNase I-like
APY29_11595	SSF53098	Ribonuclease H-like
APY29_11600	SSF46689	Homeodomain-like
APY29_11605	SSF53098	Ribonuclease H-like
APY29_11610	SSF53098	Ribonuclease H-like
APY29_11615	SSF46689	Homeodomain-like
APY29_11635	SSF48295	TrpR-like
APY29_11640	SSF53098	Ribonuclease H-like
APY29_11650	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_11655	SSF46689	Homeodomain-like
APY29_11655	SSF53098	Ribonuclease H-like
APY29_11695	SSF53098	Ribonuclease H-like
APY29_11700	SSF46689	Homeodomain-like
APY29_11705	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_11715	SSF88723	PIN domain-like
APY29_11720	SSF89447	AbrB/MazE/MraZ-like
APY29_11730	SSF47413	lambda repressor-like DNA-binding domains
APY29_11735	SSF53271	PRTase-like
APY29_11740	SSF53041	Resolvase-like
APY29_11745	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_11755	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_11760	SSF53098	Ribonuclease H-like
APY29_11765	SSF46689	Homeodomain-like
APY29_11770	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_11790	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_11830	SSF50129	GroES-like
APY29_11830	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_11835	SSF55961	Bet v1-like
APY29_11850	SSF56935	Porins
APY29_11855	SSF53098	Ribonuclease H-like
APY29_11860	SSF46689	Homeodomain-like
APY29_11870	SSF52821	Rhodanese/Cell cycle control phosphatase
APY29_11870	SSF69572	Activating enzymes of the ubiquitin-like proteins
APY29_11875	SSF53218	Molybdenum cofactor biosynthesis proteins
APY29_11875	SSF63867	MoeA C-terminal domain-like
APY29_11875	SSF63882	MoeA N-terminal region -like
APY29_11880	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_11885	SSF50998	Quinoprotein alcohol dehydrogenase-like
APY29_11890	SSF48452	TPR-like
APY29_11900	SSF48452	TPR-like
APY29_11905	SSF102114	Radical SAM enzymes
APY29_11910	SSF54919	Nucleoside diphosphate kinase, NDK
APY29_11915	SSF46689	Homeodomain-like
APY29_11915	SSF48498	Tetracyclin repressor-like, C-terminal domain
APY29_11920	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
APY29_11920	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_11920	SSF52096	ClpP/crotonase
APY29_11925	SSF53901	Thiolase-like
APY29_11935	SSF48019	post-AAA+ oligomerization domain-like
APY29_11935	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_11945	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
APY29_11950	SSF54001	Cysteine proteinases
APY29_11955	SSF46785	"Winged helix" DNA-binding domain
APY29_11955	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_11960	SSF51905	FAD/NAD(P)-binding domain
APY29_11965	SSF55729	Acyl-CoA N-acyltransferases (Nat)
APY29_11970	SSF55729	Acyl-CoA N-acyltransferases (Nat)
APY29_11975	SSF50249	Nucleic acid-binding proteins
APY29_11980	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_11980	SSF81923	Double Clp-N motif
APY29_11985	SSF54736	ClpS-like
APY29_11990	SSF55811	Nudix
APY29_11995	SSF52402	Adenine nucleotide alpha hydrolases-like
APY29_12000	SSF101322	YcfC-like
APY29_12005	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
APY29_12015	SSF141868	EAL domain-like
APY29_12015	SSF55073	Nucleotide cyclase
APY29_12015	SSF55785	PYP-like sensor domain (PAS domain)
APY29_12020	SSF55785	PYP-like sensor domain (PAS domain)
APY29_12020	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_12025	SSF141868	EAL domain-like
APY29_12025	SSF52172	CheY-like
APY29_12025	SSF55073	Nucleotide cyclase
APY29_12030	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_12030	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_12035	SSF140566	FlgN-like
APY29_12040	SSF101498	Anti-sigma factor FlgM
APY29_12050	SSF50341	CheW-like
APY29_12050	SSF52172	CheY-like
APY29_12070	SSF117143	Flagellar hook protein flgE
APY29_12075	SSF117143	Flagellar hook protein flgE
APY29_12080	SSF117143	Flagellar hook protein flgE
APY29_12100	SSF64518	Phase 1 flagellin
APY29_12105	SSF64518	Phase 1 flagellin
APY29_12110	SSF64518	Phase 1 flagellin
APY29_12120	SSF101116	Flagellar export chaperone FliS
APY29_12135	SSF46894	C-terminal effector domain of the bipartite response regulators
APY29_12135	SSF52172	CheY-like
APY29_12145	SSF52172	CheY-like
APY29_12150	SSF46689	Homeodomain-like
APY29_12150	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_12155	SSF53383	PLP-dependent transferases
APY29_12160	SSF47336	ACP-like
APY29_12165	SSF53901	Thiolase-like
APY29_12170	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_12175	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_12180	SSF51161	Trimeric LpxA-like enzymes
APY29_12185	SSF50022	ISP domain
APY29_12185	SSF55961	Bet v1-like
APY29_12190	SSF51161	Trimeric LpxA-like enzymes
APY29_12195	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_12200	SSF46689	Homeodomain-like
APY29_12205	SSF53098	Ribonuclease H-like
APY29_12215	SSF53098	Ribonuclease H-like
APY29_12220	SSF53448	Nucleotide-diphospho-sugar transferases
APY29_12220	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
APY29_12235	SSF48029	FliG
APY29_12245	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_12265	SSF101801	Surface presentation of antigens (SPOA)
APY29_12265	SSF103039	CheC-like
APY29_12270	SSF101801	Surface presentation of antigens (SPOA)
APY29_12295	SSF50998	Quinoprotein alcohol dehydrogenase-like
APY29_12295	SSF55073	Nucleotide cyclase
APY29_12295	SSF63829	Calcium-dependent phosphotriesterase
APY29_12305	SSF55073	Nucleotide cyclase
APY29_12310	SSF141868	EAL domain-like
APY29_12310	SSF55073	Nucleotide cyclase
APY29_12315	SSF160544	EscU C-terminal domain-like
APY29_12325	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_12330	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_12335	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
APY29_12335	SSF88946	Sigma2 domain of RNA polymerase sigma factors
APY29_12340	SSF52172	CheY-like
APY29_12345	SSF75708	Chemotaxis phosphatase CheZ
APY29_12350	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
APY29_12350	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_12350	SSF50341	CheW-like
APY29_12350	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_12360	SSF46689	Homeodomain-like
APY29_12365	SSF53098	Ribonuclease H-like
APY29_12370	SSF46689	Homeodomain-like
APY29_12375	SSF53098	Ribonuclease H-like
APY29_12395	SSF53098	Ribonuclease H-like
APY29_12400	SSF46689	Homeodomain-like
APY29_12405	SSF46689	Homeodomain-like
APY29_12410	SSF53098	Ribonuclease H-like
APY29_12415	SSF56935	Porins
APY29_12420	SSF56935	Porins
APY29_12430	SSF103088	OmpA-like
APY29_12435	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_12440	SSF50341	CheW-like
APY29_12445	SSF52091	SpoIIaa-like
APY29_12450	SSF52172	CheY-like
APY29_12455	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
APY29_12455	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_12455	SSF50341	CheW-like
APY29_12455	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_12460	SSF158472	HAMP domain-like
APY29_12460	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
APY29_12470	SSF158472	HAMP domain-like
APY29_12470	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
APY29_12475	SSF158472	HAMP domain-like
APY29_12475	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
APY29_12485	SSF55785	PYP-like sensor domain (PAS domain)
APY29_12485	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
APY29_12490	SSF158472	HAMP domain-like
APY29_12490	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
APY29_12495	SSF158472	HAMP domain-like
APY29_12495	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
APY29_12510	SSF158472	HAMP domain-like
APY29_12510	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
APY29_12515	SSF158472	HAMP domain-like
APY29_12515	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
APY29_12520	SSF158472	HAMP domain-like
APY29_12520	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
APY29_12525	SSF103190	Sensory domain-like
APY29_12525	SSF158472	HAMP domain-like
APY29_12525	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
APY29_12530	SSF141371	PilZ domain-like
APY29_12535	SSF50341	CheW-like
APY29_12545	SSF158472	HAMP domain-like
APY29_12545	SSF55785	PYP-like sensor domain (PAS domain)
APY29_12545	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
APY29_12550	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
APY29_12550	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_12555	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
APY29_12560	SSF52172	CheY-like
APY29_12560	SSF52738	Methylesterase CheB, C-terminal domain
APY29_12565	SSF141868	EAL domain-like
APY29_12565	SSF55073	Nucleotide cyclase
APY29_12565	SSF55781	GAF domain-like
APY29_12565	SSF55785	PYP-like sensor domain (PAS domain)
APY29_12575	SSF52016	LeuD/IlvD-like
APY29_12575	SSF53732	Aconitase iron-sulfur domain
APY29_12575	SSF74778	Aconitase B, N-terminal domain
APY29_12580	SSF88723	PIN domain-like
APY29_12585	SSF89447	AbrB/MazE/MraZ-like
APY29_12590	SSF52016	LeuD/IlvD-like
APY29_12590	SSF53732	Aconitase iron-sulfur domain
APY29_12595	SSF54427	NTF2-like
APY29_12600	SSF56801	Acetyl-CoA synthetase-like
APY29_12605	SSF52096	ClpP/crotonase
APY29_12610	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
APY29_12610	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_12610	SSF52172	CheY-like
APY29_12610	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_12615	SSF109604	HD-domain/PDEase-like
APY29_12615	SSF52172	CheY-like
APY29_12620	SSF50249	Nucleic acid-binding proteins
APY29_12620	SSF55681	Class II aaRS and biotin synthetases
APY29_12625	SSF75620	Release factor
APY29_12635	SSF53098	Ribonuclease H-like
APY29_12640	SSF46689	Homeodomain-like
APY29_12655	SSF48371	ARM repeat
APY29_12665	SSF49265	Fibronectin type III
APY29_12675	SSF64182	DHH phosphoesterases
APY29_12685	SSF46557	GreA transcript cleavage protein, N-terminal domain
APY29_12685	SSF54534	FKBP-like
APY29_12690	SSF48108	Carbamoyl phosphate synthetase, large subunit connection domain
APY29_12690	SSF52335	Methylglyoxal synthase-like
APY29_12690	SSF52440	PreATP-grasp domain
APY29_12690	SSF56059	Glutathione synthetase ATP-binding domain-like
APY29_12700	SSF52021	Carbamoyl phosphate synthetase, small subunit N-terminal domain
APY29_12700	SSF52317	Class I glutamine amidotransferase-like
APY29_12705	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_12705	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
APY29_12710	SSF50800	PK beta-barrel domain-like
APY29_12715	SSF53383	PLP-dependent transferases
APY29_12730	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_12735	SSF50037	C-terminal domain of transcriptional repressors
APY29_12740	SSF52096	ClpP/crotonase
APY29_12745	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
APY29_12750	SSF51569	Aldolase
APY29_12755	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_12760	SSF50104	Translation proteins SH3-like domain
APY29_12760	SSF50249	Nucleic acid-binding proteins
APY29_12780	SSF55103	FAD-linked oxidases, C-terminal domain
APY29_12780	SSF56176	FAD-binding/transporter-associated domain-like
APY29_12785	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_12785	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
APY29_12785	SSF55021	ACT-like
APY29_12790	SSF55811	Nudix
APY29_12805	SSF53639	AraD/HMP-PK domain-like
APY29_12810	SSF51182	RmlC-like cupins
APY29_12815	SSF56784	HAD-like
APY29_12820	SSF52129	Caspase-like
APY29_12825	SSF56300	Metallo-dependent phosphatases
APY29_12830	SSF101386	all-alpha NTP pyrophosphatases
APY29_12830	SSF141734	HisI-like
APY29_12835	SSF51366	Ribulose-phoshate binding barrel
APY29_12840	SSF51366	Ribulose-phoshate binding barrel
APY29_12845	SSF52317	Class I glutamine amidotransferase-like
APY29_12850	SSF54211	Ribosomal protein S5 domain 2-like
APY29_12850	SSF56784	HAD-like
APY29_12855	SSF53383	PLP-dependent transferases
APY29_12860	SSF53720	ALDH-like
APY29_12865	SSF53850	Periplasmic binding protein-like II
APY29_12870	SSF48295	TrpR-like
APY29_12875	SSF52954	Class II aaRS ABD-related
APY29_12875	SSF55681	Class II aaRS and biotin synthetases
APY29_12880	SSF46785	"Winged helix" DNA-binding domain
APY29_12880	SSF51206	cAMP-binding domain-like
APY29_12890	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
APY29_12895	SSF54909	Dimeric alpha+beta barrel
APY29_12900	SSF54211	Ribosomal protein S5 domain 2-like
APY29_12900	SSF55060	GHMP Kinase, C-terminal domain
APY29_12905	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_12905	SSF53633	Carbamate kinase-like
APY29_12905	SSF55021	ACT-like
APY29_12905	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
APY29_12910	SSF53098	Ribonuclease H-like
APY29_12915	SSF46689	Homeodomain-like
APY29_12930	SSF48452	TPR-like
APY29_12935	SSF88713	Glycoside hydrolase/deacetylase
APY29_12940	SSF53448	Nucleotide-diphospho-sugar transferases
APY29_12955	SSF53720	ALDH-like
APY29_12965	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_12970	SSF51395	FMN-linked oxidoreductases
APY29_12975	SSF56176	FAD-binding/transporter-associated domain-like
APY29_12975	SSF56194	Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
APY29_12980	SSF103481	Multidrug resistance efflux transporter EmrE
APY29_12985	SSF53681	Aspartate/glutamate racemase
APY29_12990	SSF103473	MFS general substrate transporter
APY29_12995	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
APY29_13005	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_13005	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_13010	SSF46689	Homeodomain-like
APY29_13010	SSF52172	CheY-like
APY29_13015	SSF51445	(Trans)glycosidases
APY29_13020	SSF141868	EAL domain-like
APY29_13020	SSF55073	Nucleotide cyclase
APY29_13020	SSF55781	GAF domain-like
APY29_13030	SSF51445	(Trans)glycosidases
APY29_13030	SSF52279	Beta-D-glucan exohydrolase, C-terminal domain
APY29_13040	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_13045	SSF143120	YefM-like
APY29_13050	SSF53697	SIS domain
APY29_13055	SSF50692	ADC-like
APY29_13060	SSF52374	Nucleotidylyl transferase
APY29_13065	SSF51621	Phosphoenolpyruvate/pyruvate domain
APY29_13070	SSF55083	6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
APY29_13075	SSF81301	Nucleotidyltransferase
APY29_13075	SSF81891	Poly A polymerase C-terminal region-like
APY29_13090	SSF53187	Zn-dependent exopeptidases
APY29_13105	SSF103473	MFS general substrate transporter
APY29_13110	SSF51658	Xylose isomerase-like
APY29_13115	SSF53067	Actin-like ATPase domain
APY29_13120	SSF48208	Six-hairpin glycosidases
APY29_13125	SSF51011	Glycosyl hydrolase domain
APY29_13125	SSF51445	(Trans)glycosidases
APY29_13125	SSF56988	Anthrax protective antigen
APY29_13125	SSF74650	Galactose mutarotase-like
APY29_13130	SSF51445	(Trans)glycosidases
APY29_13135	SSF49785	Galactose-binding domain-like
APY29_13135	SSF52266	SGNH hydrolase
APY29_13140	SSF110296	Oligoxyloglucan reducing end-specific cellobiohydrolase
APY29_13145	SSF56935	Porins
APY29_13155	SSF46785	"Winged helix" DNA-binding domain
APY29_13155	SSF53850	Periplasmic binding protein-like II
APY29_13170	SSF51569	Aldolase
APY29_13175	SSF51604	Enolase C-terminal domain-like
APY29_13175	SSF54826	Enolase N-terminal domain-like
APY29_13180	SSF63829	Calcium-dependent phosphotriesterase
APY29_13190	SSF54862	4Fe-4S ferredoxins
APY29_13200	SSF51569	Aldolase
APY29_13205	SSF55021	ACT-like
APY29_13210	SSF89946	Hypothetical protein VC0424
APY29_13215	SSF52833	Thioredoxin-like
APY29_13220	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_13220	SSF88723	PIN domain-like
APY29_13235	SSF53613	Ribokinase-like
APY29_13240	SSF53474	alpha/beta-Hydrolases
APY29_13255	SSF52821	Rhodanese/Cell cycle control phosphatase
APY29_13260	SSF46785	"Winged helix" DNA-binding domain
APY29_13260	SSF53850	Periplasmic binding protein-like II
APY29_13270	SSF51182	RmlC-like cupins
APY29_13275	SSF55785	PYP-like sensor domain (PAS domain)
APY29_13275	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
APY29_13285	SSF117130	CsrA-like
APY29_13290	SSF101353	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
APY29_13290	SSF50447	Translation proteins
APY29_13290	SSF55186	ThrRS/AlaRS common domain
APY29_13290	SSF55681	Class II aaRS and biotin synthetases
APY29_13300	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_13300	SSF54752	RecA protein, C-terminal domain
APY29_13305	SSF46785	"Winged helix" DNA-binding domain
APY29_13305	SSF51306	LexA/Signal peptidase
APY29_13310	SSF56112	Protein kinase-like (PK-like)
APY29_13315	SSF142433	CinA-like
APY29_13320	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_13325	SSF50182	Sm-like ribonucleoproteins
APY29_13330	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_13335	SSF51717	Dihydropteroate synthetase-like
APY29_13340	SSF140990	FtsH protease domain-like
APY29_13340	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_13345	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_13350	SSF75471	YhbY-like
APY29_13355	SSF64076	MTH938-like
APY29_13360	SSF51261	Duplicated hybrid motif
APY29_13370	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_13375	SSF64167	SurE-like
APY29_13380	SSF160443	SMR domain-like
APY29_13385	SSF55120	Pseudouridine synthase
APY29_13390	SSF69765	IpsF-like
APY29_13405	SSF51604	Enolase C-terminal domain-like
APY29_13405	SSF54826	Enolase N-terminal domain-like
APY29_13415	SSF51569	Aldolase
APY29_13420	SSF52317	Class I glutamine amidotransferase-like
APY29_13420	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_13430	SSF54211	Ribosomal protein S5 domain 2-like
APY29_13430	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_13430	SSF56719	Type II DNA topoisomerase
APY29_13455	SSF54631	CBS-domain pair
APY29_13455	SSF56176	FAD-binding/transporter-associated domain-like
APY29_13465	SSF50475	FMN-binding split barrel
APY29_13470	SSF51679	Bacterial luciferase-like
APY29_13475	SSF103473	MFS general substrate transporter
APY29_13480	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_13480	SSF90123	ABC transporter transmembrane region
APY29_13485	SSF53795	PEP carboxykinase-like
APY29_13490	SSF102114	Radical SAM enzymes
APY29_13500	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
APY29_13505	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
APY29_13510	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_13515	SSF51338	Composite domain of metallo-dependent hydrolases
APY29_13515	SSF51556	Metallo-dependent hydrolases
APY29_13520	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_13535	SSF53448	Nucleotide-diphospho-sugar transferases
APY29_13545	SSF53383	PLP-dependent transferases
APY29_13550	SSF55729	Acyl-CoA N-acyltransferases (Nat)
APY29_13555	SSF75005	Arabinanase/levansucrase/invertase
APY29_13560	SSF51161	Trimeric LpxA-like enzymes
APY29_13565	SSF51182	RmlC-like cupins
APY29_13570	SSF81342	Transmembrane di-heme cytochromes
APY29_13580	SSF46626	Cytochrome c
APY29_13595	SSF46689	Homeodomain-like
APY29_13600	SSF53098	Ribonuclease H-like
APY29_13605	SSF46689	Homeodomain-like
APY29_13615	SSF47090	PGBD-like
APY29_13615	SSF53955	Lysozyme-like
APY29_13625	SSF46689	Homeodomain-like
APY29_13630	SSF53098	Ribonuclease H-like
APY29_13655	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
APY29_13655	SSF88946	Sigma2 domain of RNA polymerase sigma factors
APY29_13665	SSF52743	Subtilisin-like
APY29_13680	SSF82093	Heme chaperone CcmE
APY29_13690	SSF52833	Thioredoxin-like
APY29_13700	SSF48452	TPR-like
APY29_13705	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_13705	SSF52172	CheY-like
APY29_13705	SSF55785	PYP-like sensor domain (PAS domain)
APY29_13705	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_13715	SSF52172	CheY-like
APY29_13735	SSF46785	"Winged helix" DNA-binding domain
APY29_13740	SSF51905	FAD/NAD(P)-binding domain
APY29_13745	SSF158472	HAMP domain-like
APY29_13745	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
APY29_13760	SSF46785	"Winged helix" DNA-binding domain
APY29_13760	SSF53850	Periplasmic binding protein-like II
APY29_13765	SSF52218	Flavoproteins
APY29_13770	SSF46589	tRNA-binding arm
APY29_13770	SSF55681	Class II aaRS and biotin synthetases
APY29_13775	SSF74653	TolA/TonB C-terminal domain
APY29_13780	SSF74653	TolA/TonB C-terminal domain
APY29_13785	SSF55205	EPT/RTPC-like
APY29_13795	SSF53383	PLP-dependent transferases
APY29_13800	SSF56524	Oxidoreductase molybdopterin-binding domain
APY29_13810	SSF49879	SMAD/FHA domain
APY29_13825	SSF52980	Restriction endonuclease-like
APY29_13830	SSF46785	"Winged helix" DNA-binding domain
APY29_13830	SSF64288	Chorismate lyase-like
APY29_13840	SSF51338	Composite domain of metallo-dependent hydrolases
APY29_13840	SSF51556	Metallo-dependent hydrolases
APY29_13845	SSF51338	Composite domain of metallo-dependent hydrolases
APY29_13845	SSF51556	Metallo-dependent hydrolases
APY29_13850	SSF48557	L-aspartase-like
APY29_13855	SSF53187	Zn-dependent exopeptidases
APY29_13860	SSF111326	Urocanase
APY29_13870	SSF50998	Quinoprotein alcohol dehydrogenase-like
APY29_13875	SSF101904	GyrA/ParC C-terminal domain-like
APY29_13875	SSF56719	Type II DNA topoisomerase
APY29_13880	SSF100950	NagB/RpiA/CoA transferase-like
APY29_13890	SSF55681	Class II aaRS and biotin synthetases
APY29_13895	SSF47781	RuvA domain 2-like
APY29_13895	SSF50249	Nucleic acid-binding proteins
APY29_13895	SSF52113	BRCT domain
APY29_13895	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
APY29_13900	SSF53383	PLP-dependent transferases
APY29_13915	SSF64383	Cell-division protein ZipA, C-terminal domain
APY29_13920	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_13920	SSF57997	Tropomyosin
APY29_13920	SSF75553	Smc hinge domain
APY29_13925	SSF55653	Ribosomal protein L9 C-domain
APY29_13925	SSF55658	L9 N-domain-like
APY29_13930	SSF46911	Ribosomal protein S18
APY29_13935	SSF54995	Ribosomal protein S6
APY29_13940	SSF89360	HesB-like domain
APY29_13945	SSF50249	Nucleic acid-binding proteins
APY29_13945	SSF55681	Class II aaRS and biotin synthetases
APY29_13965	SSF50475	FMN-binding split barrel
APY29_13970	SSF46689	Homeodomain-like
APY29_13975	SSF53098	Ribonuclease H-like
APY29_13985	SSF56371	Ribosome inactivating proteins (RIP)
APY29_13990	SSF46894	C-terminal effector domain of the bipartite response regulators
APY29_13990	SSF52172	CheY-like
APY29_14030	SSF53955	Lysozyme-like
APY29_14035	SSF53056	beta-carbonic anhydrase, cab
APY29_14040	SSF51182	RmlC-like cupins
APY29_14050	SSF53383	PLP-dependent transferases
APY29_14055	SSF51905	FAD/NAD(P)-binding domain
APY29_14060	SSF53098	Ribonuclease H-like
APY29_14085	SSF111331	NAD kinase/diacylglycerol kinase-like
APY29_14090	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_14095	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_14100	SSF55729	Acyl-CoA N-acyltransferases (Nat)
APY29_14105	SSF53474	alpha/beta-Hydrolases
APY29_14110	SSF50800	PK beta-barrel domain-like
APY29_14115	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
APY29_14125	SSF52821	Rhodanese/Cell cycle control phosphatase
APY29_14130	SSF55811	Nudix
APY29_14135	SSF54534	FKBP-like
APY29_14140	SSF52096	ClpP/crotonase
APY29_14150	SSF48150	DNA-glycosylase
APY29_14160	SSF53056	beta-carbonic anhydrase, cab
APY29_14170	SSF56935	Porins
APY29_14175	SSF53850	Periplasmic binding protein-like II
APY29_14180	SSF53850	Periplasmic binding protein-like II
APY29_14185	SSF161098	MetI-like
APY29_14190	SSF161098	MetI-like
APY29_14195	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_14200	SSF109755	PhoU-like
APY29_14210	SSF53098	Ribonuclease H-like
APY29_14225	SSF55315	L30e-like
APY29_14225	SSF75217	alpha/beta knot
APY29_14230	SSF51316	Mss4-like
APY29_14235	SSF50249	Nucleic acid-binding proteins
APY29_14245	SSF52266	SGNH hydrolase
APY29_14250	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
APY29_14250	SSF56645	Acyl-CoA dehydrogenase NM domain-like
APY29_14255	SSF46785	"Winged helix" DNA-binding domain
APY29_14255	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_14260	SSF82282	Homocysteine S-methyltransferase
APY29_14265	SSF47644	Methionine synthase domain
APY29_14265	SSF51717	Dihydropteroate synthetase-like
APY29_14265	SSF52242	Cobalamin (vitamin B12)-binding domain
APY29_14265	SSF56507	Methionine synthase activation domain-like
APY29_14270	SSF48208	Six-hairpin glycosidases
APY29_14275	SSF53613	Ribokinase-like
APY29_14280	SSF103473	MFS general substrate transporter
APY29_14285	SSF47413	lambda repressor-like DNA-binding domains
APY29_14285	SSF53822	Periplasmic binding protein-like I
APY29_14305	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
APY29_14305	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_14305	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
APY29_14310	SSF54534	FKBP-like
APY29_14315	SSF52833	Thioredoxin-like
APY29_14325	SSF46785	"Winged helix" DNA-binding domain
APY29_14330	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_14355	SSF48557	L-aspartase-like
APY29_14360	SSF54631	CBS-domain pair
APY29_14360	SSF56176	FAD-binding/transporter-associated domain-like
APY29_14365	SSF55797	PR-1-like
APY29_14380	SSF51197	Clavaminate synthase-like
APY29_14385	SSF55729	Acyl-CoA N-acyltransferases (Nat)
APY29_14390	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
APY29_14395	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
APY29_14395	SSF51230	Single hybrid motif
APY29_14395	SSF52777	CoA-dependent acyltransferases
APY29_14400	SSF51905	FAD/NAD(P)-binding domain
APY29_14400	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
APY29_14405	SSF102405	MCP/YpsA-like
APY29_14410	SSF54211	Ribosomal protein S5 domain 2-like
APY29_14410	SSF54980	EF-G C-terminal domain-like
APY29_14415	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_14415	SSF90123	ABC transporter transmembrane region
APY29_14420	SSF46785	"Winged helix" DNA-binding domain
APY29_14420	SSF53850	Periplasmic binding protein-like II
APY29_14425	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_14425	SSF90123	ABC transporter transmembrane region
APY29_14430	SSF111369	HlyD-like secretion proteins
APY29_14435	SSF56954	Outer membrane efflux proteins (OEP)
APY29_14445	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
APY29_14445	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_14445	SSF55021	ACT-like
APY29_14450	SSF53613	Ribokinase-like
APY29_14455	SSF46565	Chaperone J-domain
APY29_14455	SSF49493	HSP40/DnaJ peptide-binding domain
APY29_14455	SSF57938	DnaJ/Hsp40 cysteine-rich domain
APY29_14460	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
APY29_14460	SSF53067	Actin-like ATPase domain
APY29_14465	SSF51064	Head domain of nucleotide exchange factor GrpE
APY29_14465	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE
APY29_14470	SSF46785	"Winged helix" DNA-binding domain
APY29_14470	SSF55781	GAF domain-like
APY29_14475	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_14480	SSF46785	"Winged helix" DNA-binding domain
APY29_14490	SSF54285	MoaD/ThiS
APY29_14495	SSF55961	Bet v1-like
APY29_14500	SSF74982	Small protein B (SmpB)
APY29_14505	SSF52743	Subtilisin-like
APY29_14505	SSF53474	alpha/beta-Hydrolases
APY29_14515	SSF46689	Homeodomain-like
APY29_14520	SSF53098	Ribonuclease H-like
APY29_14525	SSF103473	MFS general substrate transporter
APY29_14530	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_14530	SSF90123	ABC transporter transmembrane region
APY29_14540	SSF53098	Ribonuclease H-like
APY29_14545	SSF46689	Homeodomain-like
APY29_14555	SSF55073	Nucleotide cyclase
APY29_14555	SSF55781	GAF domain-like
APY29_14565	SSF55073	Nucleotide cyclase
APY29_14570	SSF56954	Outer membrane efflux proteins (OEP)
APY29_14575	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_14580	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
APY29_14580	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
APY29_14580	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
APY29_14585	SSF111369	HlyD-like secretion proteins
APY29_14590	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_14600	SSF46785	"Winged helix" DNA-binding domain
APY29_14600	SSF53850	Periplasmic binding protein-like II
APY29_14605	SSF103088	OmpA-like
APY29_14610	SSF48173	Cryptochrome/photolyase FAD-binding domain
APY29_14610	SSF52425	Cryptochrome/photolyase, N-terminal domain
APY29_14615	SSF48024	N-terminal domain of DnaB helicase
APY29_14615	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_14620	SSF52218	Flavoproteins
APY29_14625	SSF52402	Adenine nucleotide alpha hydrolases-like
APY29_14625	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
APY29_14635	SSF47616	GST C-terminal domain-like
APY29_14635	SSF52833	Thioredoxin-like
APY29_14645	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
APY29_14645	SSF56645	Acyl-CoA dehydrogenase NM domain-like
APY29_14665	SSF51556	Metallo-dependent hydrolases
APY29_14670	SSF69572	Activating enzymes of the ubiquitin-like proteins
APY29_14675	SSF47175	Cytochromes
APY29_14685	SSF50249	Nucleic acid-binding proteins
APY29_14700	SSF53056	beta-carbonic anhydrase, cab
APY29_14705	SSF47616	GST C-terminal domain-like
APY29_14705	SSF52833	Thioredoxin-like
APY29_14715	SSF117457	FumA C-terminal domain-like
APY29_14720	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_14720	SSF90123	ABC transporter transmembrane region
APY29_14725	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
APY29_14725	SSF63380	Riboflavin synthase domain-like
APY29_14730	SSF52833	Thioredoxin-like
APY29_14735	SSF55486	Metalloproteases ("zincins"), catalytic domain
APY29_14740	SSF46785	"Winged helix" DNA-binding domain
APY29_14750	SSF55729	Acyl-CoA N-acyltransferases (Nat)
APY29_14760	SSF144091	Rhomboid-like
APY29_14765	SSF103473	MFS general substrate transporter
APY29_14770	SSF53187	Zn-dependent exopeptidases
APY29_14775	SSF51445	(Trans)glycosidases
APY29_14775	SSF52279	Beta-D-glucan exohydrolase, C-terminal domain
APY29_14785	SSF103473	MFS general substrate transporter
APY29_14790	SSF111369	HlyD-like secretion proteins
APY29_14795	SSF56954	Outer membrane efflux proteins (OEP)
APY29_14800	SSF46785	"Winged helix" DNA-binding domain
APY29_14810	SSF101904	GyrA/ParC C-terminal domain-like
APY29_14810	SSF56719	Type II DNA topoisomerase
APY29_14815	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_14820	SSF47240	Ferritin-like
APY29_14830	SSF56935	Porins
APY29_14835	SSF51126	Pectin lyase-like
APY29_14840	SSF52402	Adenine nucleotide alpha hydrolases-like
APY29_14840	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
APY29_14845	SSF53187	Zn-dependent exopeptidases
APY29_14845	SSF55031	Bacterial exopeptidase dimerisation domain
APY29_14850	SSF52833	Thioredoxin-like
APY29_14855	SSF51161	Trimeric LpxA-like enzymes
APY29_14860	SSF109604	HD-domain/PDEase-like
APY29_14860	SSF55021	ACT-like
APY29_14860	SSF81301	Nucleotidyltransferase
APY29_14860	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
APY29_14865	SSF55920	Creatinase/aminopeptidase
APY29_14875	SSF49354	PapD-like
APY29_14895	SSF49354	PapD-like
APY29_14900	SSF52313	Ribosomal protein S2
APY29_14905	SSF46934	UBA-like
APY29_14905	SSF54713	Elongation factor Ts (EF-Ts), dimerisation domain
APY29_14910	SSF109604	HD-domain/PDEase-like
APY29_14910	SSF55073	Nucleotide cyclase
APY29_14915	SSF53633	Carbamate kinase-like
APY29_14920	SSF55194	Ribosome recycling factor, RRF
APY29_14925	SSF64005	Undecaprenyl diphosphate synthase
APY29_14935	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_14935	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
APY29_14935	SSF69055	1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
APY29_14940	SSF50156	PDZ domain-like
APY29_14955	SSF51161	Trimeric LpxA-like enzymes
APY29_14960	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
APY29_14965	SSF51161	Trimeric LpxA-like enzymes
APY29_14970	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
APY29_14975	SSF53098	Ribonuclease H-like
APY29_14980	SSF160975	AF1531-like
APY29_14980	SSF50249	Nucleic acid-binding proteins
APY29_14980	SSF89550	PHP domain-like
APY29_14985	SSF52096	ClpP/crotonase
APY29_14990	SSF48452	TPR-like
APY29_15005	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_15010	SSF53474	alpha/beta-Hydrolases
APY29_15020	SSF46785	"Winged helix" DNA-binding domain
APY29_15050	SSF82282	Homocysteine S-methyltransferase
APY29_15060	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
APY29_15065	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_15070	SSF55486	Metalloproteases ("zincins"), catalytic domain
APY29_15080	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
APY29_15080	SSF50249	Nucleic acid-binding proteins
APY29_15080	SSF52374	Nucleotidylyl transferase
APY29_15080	SSF57770	Methionyl-tRNA synthetase (MetRS), Zn-domain
APY29_15085	SSF56784	HAD-like
APY29_15090	SSF54862	4Fe-4S ferredoxins
APY29_15110	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
APY29_15110	SSF88946	Sigma2 domain of RNA polymerase sigma factors
APY29_15125	SSF51905	FAD/NAD(P)-binding domain
APY29_15135	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_15150	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_15155	SSF55298	YjgF-like
APY29_15165	SSF55729	Acyl-CoA N-acyltransferases (Nat)
APY29_15170	SSF53474	alpha/beta-Hydrolases
APY29_15180	SSF109604	HD-domain/PDEase-like
APY29_15185	SSF55144	LigT-like
APY29_15200	SSF103473	MFS general substrate transporter
APY29_15210	SSF57783	Zinc beta-ribbon
APY29_15210	SSF82057	Prokaryotic SH3-related domain
APY29_15215	SSF161111	Cation efflux protein transmembrane domain-like
APY29_15220	SSF54534	FKBP-like
APY29_15225	SSF53067	Actin-like ATPase domain
APY29_15240	SSF50182	Sm-like ribonucleoproteins
APY29_15245	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
APY29_15260	SSF53098	Ribonuclease H-like
APY29_15265	SSF46689	Homeodomain-like
APY29_15275	SSF81901	HCP-like
APY29_15280	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_15280	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
APY29_15285	SSF103515	Autotransporter
APY29_15285	SSF52743	Subtilisin-like
APY29_15290	SSF53901	Thiolase-like
APY29_15305	SSF55073	Nucleotide cyclase
APY29_15305	SSF55781	GAF domain-like
APY29_15320	SSF56281	Metallo-hydrolase/oxidoreductase
APY29_15330	SSF50249	Nucleic acid-binding proteins
APY29_15330	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
APY29_15335	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_15340	SSF56300	Metallo-dependent phosphatases
APY29_15345	SSF51905	FAD/NAD(P)-binding domain
APY29_15350	SSF50249	Nucleic acid-binding proteins
APY29_15355	SSF53167	Purine and uridine phosphorylases
APY29_15360	SSF53271	PRTase-like
APY29_15365	SSF51445	(Trans)glycosidases
APY29_15370	SSF48173	Cryptochrome/photolyase FAD-binding domain
APY29_15375	SSF51905	FAD/NAD(P)-binding domain
APY29_15380	SSF52833	Thioredoxin-like
APY29_15390	SSF50249	Nucleic acid-binding proteins
APY29_15390	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_15395	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
APY29_15395	SSF52172	CheY-like
APY29_15400	SSF50249	Nucleic acid-binding proteins
APY29_15400	SSF57863	ArfGap/RecO-like zinc finger
APY29_15405	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_15405	SSF54814	Prokaryotic type KH domain (KH-domain type II)
APY29_15410	SSF54768	dsRNA-binding domain-like
APY29_15410	SSF69065	RNase III domain-like
APY29_15420	SSF51306	LexA/Signal peptidase
APY29_15425	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_15425	SSF54980	EF-G C-terminal domain-like
APY29_15430	SSF50156	PDZ domain-like
APY29_15430	SSF50494	Trypsin-like serine proteases
APY29_15435	SSF89069	N-terminal, cytoplasmic domain of anti-sigmaE factor RseA
APY29_15440	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
APY29_15440	SSF88946	Sigma2 domain of RNA polymerase sigma factors
APY29_15445	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
APY29_15445	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_15445	SSF52096	ClpP/crotonase
APY29_15450	SSF160240	Cation efflux protein cytoplasmic domain-like
APY29_15450	SSF161111	Cation efflux protein transmembrane domain-like
APY29_15455	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
APY29_15455	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_15460	SSF52096	ClpP/crotonase
APY29_15465	SSF52096	ClpP/crotonase
APY29_15470	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
APY29_15470	SSF56645	Acyl-CoA dehydrogenase NM domain-like
APY29_15475	SSF53720	ALDH-like
APY29_15480	SSF47413	lambda repressor-like DNA-binding domains
APY29_15485	SSF56935	Porins
APY29_15490	SSF51445	(Trans)glycosidases
APY29_15495	SSF49303	beta-Galactosidase/glucuronidase domain
APY29_15495	SSF49785	Galactose-binding domain-like
APY29_15495	SSF51445	(Trans)glycosidases
APY29_15505	SSF49785	Galactose-binding domain-like
APY29_15505	SSF51445	(Trans)glycosidases
APY29_15515	SSF46689	Homeodomain-like
APY29_15520	SSF53098	Ribonuclease H-like
APY29_15530	SSF53098	Ribonuclease H-like
APY29_15535	SSF46689	Homeodomain-like
APY29_15560	SSF48334	DNA repair protein MutS, domain III
APY29_15560	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_15560	SSF53150	DNA repair protein MutS, domain II
APY29_15560	SSF55271	DNA repair protein MutS, domain I
APY29_15570	SSF48113	Heme-dependent peroxidases
APY29_15575	SSF55174	Alpha-L RNA-binding motif
APY29_15580	SSF47616	GST C-terminal domain-like
APY29_15580	SSF52833	Thioredoxin-like
APY29_15585	SSF46785	"Winged helix" DNA-binding domain
APY29_15600	SSF50104	Translation proteins SH3-like domain
APY29_15605	SSF75217	alpha/beta knot
APY29_15610	SSF50346	PRC-barrel domain
APY29_15610	SSF50447	Translation proteins
APY29_15615	SSF54565	Ribosomal protein S16
APY29_15620	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
APY29_15625	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
APY29_15630	SSF47446	Signal peptide-binding domain
APY29_15630	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_15645	SSF74650	Galactose mutarotase-like
APY29_15655	SSF51011	Glycosyl hydrolase domain
APY29_15655	SSF51445	(Trans)glycosidases
APY29_15660	SSF49785	Galactose-binding domain-like
APY29_15660	SSF49899	Concanavalin A-like lectins/glucanases
APY29_15665	SSF52172	CheY-like
APY29_15670	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_15670	SSF55785	PYP-like sensor domain (PAS domain)
APY29_15670	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_15675	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_15675	SSF52172	CheY-like
APY29_15675	SSF55781	GAF domain-like
APY29_15675	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_15680	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_15685	SSF52738	Methylesterase CheB, C-terminal domain
APY29_15690	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_15690	SSF52172	CheY-like
APY29_15690	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_15695	SSF54909	Dimeric alpha+beta barrel
APY29_15700	SSF52833	Thioredoxin-like
APY29_15705	SSF56935	Porins
APY29_15710	SSF49899	Concanavalin A-like lectins/glucanases
APY29_15710	SSF75005	Arabinanase/levansucrase/invertase
APY29_15715	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_15715	SSF52172	CheY-like
APY29_15715	SSF55785	PYP-like sensor domain (PAS domain)
APY29_15715	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_15720	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_15720	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_15725	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_15725	SSF81606	PP2C-like
APY29_15730	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_15735	SSF52091	SpoIIaa-like
APY29_15740	SSF52091	SpoIIaa-like
APY29_15745	SSF48452	TPR-like
APY29_15750	SSF54211	Ribosomal protein S5 domain 2-like
APY29_15750	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_15755	SSF46689	Homeodomain-like
APY29_15755	SSF48452	TPR-like
APY29_15760	SSF46894	C-terminal effector domain of the bipartite response regulators
APY29_15760	SSF52172	CheY-like
APY29_15770	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_15770	SSF54211	Ribosomal protein S5 domain 2-like
APY29_15775	SSF50156	PDZ domain-like
APY29_15785	SSF81452	Cytochrome c oxidase subunit III-like
APY29_15790	SSF81442	Cytochrome c oxidase subunit I-like
APY29_15795	SSF49503	Cupredoxins
APY29_15795	SSF81464	Cytochrome c oxidase subunit II-like, transmembrane region
APY29_15800	SSF56349	DNA breaking-rejoining enzymes
APY29_15835	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_15835	SSF56024	Phospholipase D/nuclease
APY29_15845	SSF46689	Homeodomain-like
APY29_15850	SSF53098	Ribonuclease H-like
APY29_15890	SSF51261	Duplicated hybrid motif
APY29_15910	SSF46689	Homeodomain-like
APY29_15915	SSF53098	Ribonuclease H-like
APY29_15925	SSF46785	"Winged helix" DNA-binding domain
APY29_15950	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
APY29_15950	SSF50677	ValRS/IleRS/LeuRS editing domain
APY29_15950	SSF52374	Nucleotidylyl transferase
APY29_15955	SSF52374	Nucleotidylyl transferase
APY29_15955	SSF82114	Riboflavin kinase-like
APY29_15965	SSF46992	Ribosomal protein S20
APY29_15970	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_15970	SSF82051	Obg GTP-binding protein N-terminal domain
APY29_15975	SSF110324	Ribosomal L27 protein-like
APY29_15980	SSF141091	L21p-like
APY29_15985	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_15990	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
APY29_15995	SSF110087	DR1885-like metal-binding protein
APY29_16000	SSF52096	ClpP/crotonase
APY29_16005	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
APY29_16025	SSF47473	EF-hand
APY29_16030	SSF55729	Acyl-CoA N-acyltransferases (Nat)
APY29_16035	SSF56219	DNase I-like
APY29_16040	SSF51246	Rudiment single hybrid motif
APY29_16040	SSF52440	PreATP-grasp domain
APY29_16040	SSF56059	Glutathione synthetase ATP-binding domain-like
APY29_16045	SSF117892	Band 7/SPFH domain
APY29_16055	SSF47598	Ribbon-helix-helix
APY29_16060	SSF55166	Hedgehog/DD-peptidase
APY29_16065	SSF48150	DNA-glycosylase
APY29_16075	SSF55961	Bet v1-like
APY29_16080	SSF46894	C-terminal effector domain of the bipartite response regulators
APY29_16080	SSF52172	CheY-like
APY29_16085	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_16095	SSF55729	Acyl-CoA N-acyltransferases (Nat)
APY29_16100	SSF63848	Cell-division inhibitor MinC, C-terminal domain
APY29_16105	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_16110	SSF55229	Cell division protein MinE topological specificity domain
APY29_16120	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_16120	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_16125	SSF52172	CheY-like
APY29_16135	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
APY29_16140	SSF53649	Alkaline phosphatase-like
APY29_16145	SSF55486	Metalloproteases ("zincins"), catalytic domain
APY29_16155	SSF103473	MFS general substrate transporter
APY29_16160	SSF53383	PLP-dependent transferases
APY29_16165	SSF53474	alpha/beta-Hydrolases
APY29_16170	SSF51430	NAD(P)-linked oxidoreductase
APY29_16175	SSF52317	Class I glutamine amidotransferase-like
APY29_16175	SSF56634	Heme-dependent catalase-like
APY29_16185	SSF46689	Homeodomain-like
APY29_16190	SSF53098	Ribonuclease H-like
APY29_16210	SSF46689	Homeodomain-like
APY29_16210	SSF55785	PYP-like sensor domain (PAS domain)
APY29_16230	SSF46689	Homeodomain-like
APY29_16235	SSF53098	Ribonuclease H-like
APY29_16240	SSF53474	alpha/beta-Hydrolases
APY29_16240	SSF82171	DPP6 N-terminal domain-like
APY29_16260	SSF109604	HD-domain/PDEase-like
APY29_16265	SSF53474	alpha/beta-Hydrolases
APY29_16270	SSF89550	PHP domain-like
APY29_16275	SSF56672	DNA/RNA polymerases
APY29_16280	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_16285	SSF46785	"Winged helix" DNA-binding domain
APY29_16285	SSF51306	LexA/Signal peptidase
APY29_16290	SSF89447	AbrB/MazE/MraZ-like
APY29_16295	SSF140931	Fic-like
APY29_16305	SSF51182	RmlC-like cupins
APY29_16320	SSF47741	CO dehydrogenase ISP C-domain like
APY29_16320	SSF54292	2Fe-2S ferredoxin-like
APY29_16325	SSF55447	CO dehydrogenase flavoprotein C-terminal domain-like
APY29_16325	SSF56176	FAD-binding/transporter-associated domain-like
APY29_16330	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
APY29_16330	SSF56003	Molybdenum cofactor-binding domain
APY29_16335	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_16345	SSF109604	HD-domain/PDEase-like
APY29_16350	SSF141868	EAL domain-like
APY29_16355	SSF57850	RING/U-box
APY29_16365	SSF51197	Clavaminate synthase-like
APY29_16370	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_16375	SSF46689	Homeodomain-like
APY29_16380	SSF53098	Ribonuclease H-like
APY29_16385	SSF48208	Six-hairpin glycosidases
APY29_16390	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_16400	SSF51445	(Trans)glycosidases
APY29_16405	SSF53613	Ribokinase-like
APY29_16410	SSF53254	Phosphoglycerate mutase-like
APY29_16415	SSF46689	Homeodomain-like
APY29_16425	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_16430	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_16440	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_16440	SSF89550	PHP domain-like
APY29_16445	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_16470	SSF46689	Homeodomain-like
APY29_16470	SSF48498	Tetracyclin repressor-like, C-terminal domain
APY29_16475	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_16485	SSF55486	Metalloproteases ("zincins"), catalytic domain
APY29_16485	SSF63737	Leukotriene A4 hydrolase N-terminal domain
APY29_16490	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_16495	SSF143422	Transposase IS200-like
APY29_16500	SSF117892	Band 7/SPFH domain
APY29_16505	SSF117892	Band 7/SPFH domain
APY29_16510	SSF52172	CheY-like
APY29_16515	SSF46565	Chaperone J-domain
APY29_16515	SSF49493	HSP40/DnaJ peptide-binding domain
APY29_16520	SSF49764	HSP20-like chaperones
APY29_16525	SSF52833	Thioredoxin-like
APY29_16530	SSF47240	Ferritin-like
APY29_16535	SSF53955	Lysozyme-like
APY29_16535	SSF56601	beta-lactamase/transpeptidase-like
APY29_16540	SSF51695	PLC-like phosphodiesterases
APY29_16545	SSF56935	Porins
APY29_16550	SSF48239	Terpenoid cyclases/Protein prenyltransferases
APY29_16555	SSF53590	Nucleoside hydrolase
APY29_16560	SSF56935	Porins
APY29_16565	SSF54506	Diaminopimelate epimerase-like
APY29_16575	SSF52016	LeuD/IlvD-like
APY29_16575	SSF53732	Aconitase iron-sulfur domain
APY29_16580	SSF48256	Citrate synthase
APY29_16585	SSF51621	Phosphoenolpyruvate/pyruvate domain
APY29_16590	SSF159800	PrpR receptor domain-like
APY29_16590	SSF46689	Homeodomain-like
APY29_16590	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_16610	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_16620	SSF56322	ADC synthase
APY29_16625	SSF53901	Thiolase-like
APY29_16630	SSF47336	ACP-like
APY29_16635	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_16640	SSF52151	FabD/lysophospholipase-like
APY29_16640	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
APY29_16645	SSF55785	PYP-like sensor domain (PAS domain)
APY29_16650	SSF53901	Thiolase-like
APY29_16655	SSF57829	Zn-binding ribosomal proteins
APY29_16665	SSF52972	ITPase-like
APY29_16675	SSF53448	Nucleotide-diphospho-sugar transferases
APY29_16685	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_16695	SSF54001	Cysteine proteinases
APY29_16705	SSF54197	HIT-like
APY29_16710	SSF111304	Recombination protein RecR
APY29_16715	SSF82607	YbaB-like
APY29_16720	SSF48019	post-AAA+ oligomerization domain-like
APY29_16720	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_16730	SSF54690	Molybdopterin synthase subunit MoaE
APY29_16735	SSF54285	MoaD/ThiS
APY29_16740	SSF55040	Molybdenum cofactor biosynthesis protein C, MoaC
APY29_16750	SSF102114	Radical SAM enzymes
APY29_16755	SSF56281	Metallo-hydrolase/oxidoreductase
APY29_16760	SSF56112	Protein kinase-like (PK-like)
APY29_16765	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
APY29_16780	SSF81606	PP2C-like
APY29_16785	SSF53098	Ribonuclease H-like
APY29_16790	SSF53098	Ribonuclease H-like
APY29_16795	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_16800	SSF56281	Metallo-hydrolase/oxidoreductase
APY29_16805	SSF53955	Lysozyme-like
APY29_16805	SSF54106	LysM domain
APY29_16810	SSF109998	Triger factor/SurA peptide-binding domain-like
APY29_16810	SSF54534	FKBP-like
APY29_16830	SSF47729	IHF-like DNA-binding proteins
APY29_16835	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_16835	SSF54211	Ribosomal protein S5 domain 2-like
APY29_16835	SSF88697	PUA domain-like
APY29_16840	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_16840	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
APY29_16845	SSF52096	ClpP/crotonase
APY29_16850	SSF102735	Trigger factor ribosome-binding domain
APY29_16850	SSF109998	Triger factor/SurA peptide-binding domain-like
APY29_16850	SSF54534	FKBP-like
APY29_16860	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_16860	SSF55785	PYP-like sensor domain (PAS domain)
APY29_16860	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_16890	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
APY29_16895	SSF69118	AhpD-like
APY29_16900	SSF52833	Thioredoxin-like
APY29_16905	SSF48452	TPR-like
APY29_16910	SSF46894	C-terminal effector domain of the bipartite response regulators
APY29_16910	SSF52172	CheY-like
APY29_16915	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_16915	SSF55785	PYP-like sensor domain (PAS domain)
APY29_16915	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_16920	SSF140356	PPK N-terminal domain-like
APY29_16920	SSF143724	PHP14-like
APY29_16920	SSF56024	Phospholipase D/nuclease
APY29_16925	SSF109604	HD-domain/PDEase-like
APY29_16925	SSF53067	Actin-like ATPase domain
APY29_16935	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
APY29_16940	SSF56300	Metallo-dependent phosphatases
APY29_16950	SSF55486	Metalloproteases ("zincins"), catalytic domain
APY29_16960	SSF46689	Homeodomain-like
APY29_16965	SSF53098	Ribonuclease H-like
APY29_16975	SSF53271	PRTase-like
APY29_16975	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
APY29_16985	SSF110997	Sporulation related repeat
APY29_16990	SSF53244	MurD-like peptide ligases, peptide-binding domain
APY29_16990	SSF53623	MurD-like peptide ligases, catalytic domain
APY29_16995	SSF53254	Phosphoglycerate mutase-like
APY29_17005	SSF50494	Trypsin-like serine proteases
APY29_17010	SSF53649	Alkaline phosphatase-like
APY29_17015	SSF56935	Porins
APY29_17020	SSF50129	GroES-like
APY29_17020	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_17030	SSF50331	MOP-like
APY29_17030	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_17035	SSF161098	MetI-like
APY29_17040	SSF161098	MetI-like
APY29_17045	SSF53850	Periplasmic binding protein-like II
APY29_17050	SSF53383	PLP-dependent transferases
APY29_17060	SSF55120	Pseudouridine synthase
APY29_17060	SSF55174	Alpha-L RNA-binding motif
APY29_17070	SSF103088	OmpA-like
APY29_17070	SSF103647	TSP type-3 repeat
APY29_17070	SSF56925	OMPA-like
APY29_17075	SSF50129	GroES-like
APY29_17075	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_17080	SSF51395	FMN-linked oxidoreductases
APY29_17080	SSF51905	FAD/NAD(P)-binding domain
APY29_17080	SSF51971	Nucleotide-binding domain
APY29_17090	SSF47616	GST C-terminal domain-like
APY29_17090	SSF52833	Thioredoxin-like
APY29_17095	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_17095	SSF56327	LDH C-terminal domain-like
APY29_17100	SSF50891	Cyclophilin-like
APY29_17105	SSF50447	Translation proteins
APY29_17105	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_17105	SSF54980	EF-G C-terminal domain-like
APY29_17120	SSF50182	Sm-like ribonucleoproteins
APY29_17125	SSF51569	Aldolase
APY29_17130	SSF56935	Porins
APY29_17140	SSF158442	DsbB-like
APY29_17145	SSF64263	Prokaryotic ribosomal protein L17
APY29_17150	SSF47789	C-terminal domain of RNA polymerase alpha subunit
APY29_17150	SSF55257	RBP11-like subunits of RNA polymerase
APY29_17150	SSF56553	Insert subdomain of RNA polymerase alpha subunit
APY29_17155	SSF55174	Alpha-L RNA-binding motif
APY29_17160	SSF53137	Translational machinery components
APY29_17165	SSF46946	S13-like H2TH domain
APY29_17170	SSF103491	Preprotein translocase SecY subunit
APY29_17175	SSF52080	Ribosomal proteins L15p and L18e
APY29_17180	SSF55129	Ribosomal protein L30p/L7e
APY29_17185	SSF54211	Ribosomal protein S5 domain 2-like
APY29_17185	SSF54768	dsRNA-binding domain-like
APY29_17190	SSF53137	Translational machinery components
APY29_17195	SSF56053	Ribosomal protein L6
APY29_17200	SSF56047	Ribosomal protein S8
APY29_17205	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
APY29_17210	SSF55282	RL5-like
APY29_17215	SSF50104	Translation proteins SH3-like domain
APY29_17220	SSF50193	Ribosomal protein L14
APY29_17225	SSF50249	Nucleic acid-binding proteins
APY29_17230	SSF46561	Ribosomal protein L29 (L29p)
APY29_17235	SSF54686	Ribosomal protein L16p/L10e
APY29_17240	SSF54814	Prokaryotic type KH domain (KH-domain type II)
APY29_17240	SSF54821	Ribosomal protein S3 C-terminal domain
APY29_17245	SSF54843	Ribosomal protein L22
APY29_17250	SSF54570	Ribosomal protein S19
APY29_17255	SSF50104	Translation proteins SH3-like domain
APY29_17255	SSF50249	Nucleic acid-binding proteins
APY29_17260	SSF54189	Ribosomal proteins S24e, L23 and L15e
APY29_17265	SSF52166	Ribosomal protein L4
APY29_17270	SSF50447	Translation proteins
APY29_17275	SSF54999	Ribosomal protein S10
APY29_17280	SSF50447	Translation proteins
APY29_17280	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
APY29_17280	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_17285	SSF50447	Translation proteins
APY29_17285	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_17285	SSF54211	Ribosomal protein S5 domain 2-like
APY29_17285	SSF54980	EF-G C-terminal domain-like
APY29_17290	SSF47973	Ribosomal protein S7
APY29_17295	SSF50249	Nucleic acid-binding proteins
APY29_17300	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
APY29_17305	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
APY29_17310	SSF48300	Ribosomal protein L7/12, oligomerisation (N-terminal) domain
APY29_17310	SSF54736	ClpS-like
APY29_17315	SSF160369	Ribosomal protein L10-like
APY29_17320	SSF56808	Ribosomal protein L1
APY29_17325	SSF46906	Ribosomal protein L11, C-terminal domain
APY29_17325	SSF54747	Ribosomal L11/L12e N-terminal domain
APY29_17330	SSF50104	Translation proteins SH3-like domain
APY29_17330	SSF82679	N-utilization substance G protein NusG, N-terminal domain
APY29_17345	SSF50447	Translation proteins
APY29_17345	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
APY29_17345	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_17365	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_17365	SSF81271	TGS-like
APY29_17370	SSF53178	Peptidyl-tRNA hydrolase-like
APY29_17375	SSF50715	Ribosomal protein L25-like
APY29_17380	SSF53271	PRTase-like
APY29_17390	SSF54211	Ribosomal protein S5 domain 2-like
APY29_17390	SSF55060	GHMP Kinase, C-terminal domain
APY29_17395	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
APY29_17400	SSF48452	TPR-like
APY29_17405	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_17405	SSF69075	Glutamyl tRNA-reductase dimerization domain
APY29_17405	SSF69742	Glutamyl tRNA-reductase catalytic, N-terminal domain
APY29_17410	SSF75620	Release factor
APY29_17415	SSF48452	TPR-like
APY29_17415	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
APY29_17420	SSF53218	Molybdenum cofactor biosynthesis proteins
APY29_17425	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_17435	SSF54975	Acylphosphatase/BLUF domain-like
APY29_17440	SSF52833	Thioredoxin-like
APY29_17450	SSF52218	Flavoproteins
APY29_17460	SSF51011	Glycosyl hydrolase domain
APY29_17460	SSF51445	(Trans)glycosidases
APY29_17465	SSF53774	Glutaminase/Asparaginase
APY29_17470	SSF55826	YbaK/ProRS associated domain
APY29_17475	SSF52743	Subtilisin-like
APY29_17490	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
APY29_17495	SSF117916	Fe-S cluster assembly (FSCA) domain-like
APY29_17505	SSF52467	DHS-like NAD/FAD-binding domain
APY29_17515	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
APY29_17515	SSF88946	Sigma2 domain of RNA polymerase sigma factors
APY29_17530	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_17530	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
APY29_17535	SSF46689	Homeodomain-like
APY29_17535	SSF48498	Tetracyclin repressor-like, C-terminal domain
APY29_17540	SSF53474	alpha/beta-Hydrolases
APY29_17555	SSF55469	FMN-dependent nitroreductase-like
APY29_17560	SSF47807	5' to 3' exonuclease, C-terminal subdomain
APY29_17560	SSF88723	PIN domain-like
APY29_17565	SSF55811	Nudix
APY29_17570	SSF53187	Zn-dependent exopeptidases
APY29_17575	SSF53474	alpha/beta-Hydrolases
APY29_17580	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_17585	SSF52833	Thioredoxin-like
APY29_17590	SSF51905	FAD/NAD(P)-binding domain
APY29_17590	SSF52833	Thioredoxin-like
APY29_17595	SSF46785	"Winged helix" DNA-binding domain
APY29_17595	SSF53850	Periplasmic binding protein-like II
APY29_17600	SSF54534	FKBP-like
APY29_17605	SSF51569	Aldolase
APY29_17610	SSF52317	Class I glutamine amidotransferase-like
APY29_17615	SSF55068	Peptide methionine sulfoxide reductase
APY29_17620	SSF54427	NTF2-like
APY29_17625	SSF46894	C-terminal effector domain of the bipartite response regulators
APY29_17625	SSF55781	GAF domain-like
APY29_17630	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_17630	SSF52172	CheY-like
APY29_17630	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_17635	SSF52172	CheY-like
APY29_17645	SSF47616	GST C-terminal domain-like
APY29_17645	SSF52833	Thioredoxin-like
APY29_17650	SSF50715	Ribosomal protein L25-like
APY29_17650	SSF52374	Nucleotidylyl transferase
APY29_17660	SSF103481	Multidrug resistance efflux transporter EmrE
APY29_17680	SSF53927	Cytidine deaminase-like
APY29_17690	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_17690	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
APY29_17695	SSF63829	Calcium-dependent phosphotriesterase
APY29_17705	SSF47473	EF-hand
APY29_17710	SSF46785	"Winged helix" DNA-binding domain
APY29_17715	SSF52096	ClpP/crotonase
APY29_17720	SSF53720	ALDH-like
APY29_17725	SSF56801	Acetyl-CoA synthetase-like
APY29_17730	SSF46785	"Winged helix" DNA-binding domain
APY29_17730	SSF53850	Periplasmic binding protein-like II
APY29_17735	SSF48076	LigA subunit of an aromatic-ring-opening dioxygenase LigAB
APY29_17740	SSF53213	LigB-like
APY29_17745	SSF46785	"Winged helix" DNA-binding domain
APY29_17745	SSF48008	GntR ligand-binding domain-like
APY29_17755	SSF54427	NTF2-like
APY29_17760	SSF53474	alpha/beta-Hydrolases
APY29_17765	SSF51905	FAD/NAD(P)-binding domain
APY29_17770	SSF51905	FAD/NAD(P)-binding domain
APY29_17780	SSF89028	Cobalamin adenosyltransferase-like
APY29_17785	SSF52768	Arginase/deacetylase
APY29_17790	SSF52768	Arginase/deacetylase
APY29_17800	SSF109998	Triger factor/SurA peptide-binding domain-like
APY29_17800	SSF54534	FKBP-like
APY29_17805	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
APY29_17810	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_17815	SSF110069	ApaG-like
APY29_17820	SSF56300	Metallo-dependent phosphatases
APY29_17825	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_17830	SSF161098	MetI-like
APY29_17835	SSF161098	MetI-like
APY29_17840	SSF53850	Periplasmic binding protein-like II
APY29_17845	SSF51679	Bacterial luciferase-like
APY29_17850	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
APY29_17850	SSF56645	Acyl-CoA dehydrogenase NM domain-like
APY29_17860	SSF56935	Porins
APY29_17865	SSF52218	Flavoproteins
APY29_17870	SSF51679	Bacterial luciferase-like
APY29_17875	SSF53850	Periplasmic binding protein-like II
APY29_17880	SSF161098	MetI-like
APY29_17885	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_17890	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
APY29_17890	SSF56645	Acyl-CoA dehydrogenase NM domain-like
APY29_17895	SSF46689	Homeodomain-like
APY29_17895	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_17900	SSF53597	Dihydrofolate reductase-like
APY29_17910	SSF55831	Thymidylate synthase/dCMP hydroxymethylase
APY29_17930	SSF140478	LemA-like
APY29_17940	SSF52266	SGNH hydrolase
APY29_17950	SSF46894	C-terminal effector domain of the bipartite response regulators
APY29_17950	SSF52172	CheY-like
APY29_17955	SSF52266	SGNH hydrolase
APY29_17960	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_17970	SSF51197	Clavaminate synthase-like
APY29_17975	SSF53850	Periplasmic binding protein-like II
APY29_17980	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_17985	SSF161098	MetI-like
APY29_18000	SSF144064	Heme iron utilization protein-like
APY29_18005	SSF56935	Porins
APY29_18015	SSF51430	NAD(P)-linked oxidoreductase
APY29_18025	SSF53613	Ribokinase-like
APY29_18035	SSF51395	FMN-linked oxidoreductases
APY29_18040	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_18050	SSF55973	S-adenosylmethionine synthetase
APY29_18055	SSF53254	Phosphoglycerate mutase-like
APY29_18060	SSF56935	Porins
APY29_18080	SSF46689	Homeodomain-like
APY29_18080	SSF48498	Tetracyclin repressor-like, C-terminal domain
APY29_18085	SSF51621	Phosphoenolpyruvate/pyruvate domain
APY29_18090	SSF53474	alpha/beta-Hydrolases
APY29_18090	SSF82171	DPP6 N-terminal domain-like
APY29_18095	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_18095	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
APY29_18100	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_18105	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_18110	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_18130	SSF51011	Glycosyl hydrolase domain
APY29_18130	SSF51445	(Trans)glycosidases
APY29_18135	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_18140	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
APY29_18145	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
APY29_18150	SSF52743	Subtilisin-like
APY29_18150	SSF54897	Protease propeptides/inhibitors
APY29_18155	SSF50129	GroES-like
APY29_18155	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_18160	SSF51445	(Trans)glycosidases
APY29_18165	SSF51730	FAD-linked oxidoreductase
APY29_18175	SSF51391	Thiamin phosphate synthase
APY29_18175	SSF55811	Nudix
APY29_18180	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_18180	SSF81767	Pre-protein crosslinking domain of SecA
APY29_18180	SSF81886	Helical scaffold and wing domains of SecA
APY29_18185	SSF51261	Duplicated hybrid motif
APY29_18195	SSF54211	Ribosomal protein S5 domain 2-like
APY29_18200	SSF52490	Tubulin nucleotide-binding domain-like
APY29_18200	SSF55307	Tubulin C-terminal domain-like
APY29_18205	SSF53067	Actin-like ATPase domain
APY29_18215	SSF52440	PreATP-grasp domain
APY29_18215	SSF56059	Glutathione synthetase ATP-binding domain-like
APY29_18220	SSF51984	MurCD N-terminal domain
APY29_18220	SSF53244	MurD-like peptide ligases, peptide-binding domain
APY29_18220	SSF53623	MurD-like peptide ligases, catalytic domain
APY29_18225	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
APY29_18240	SSF53244	MurD-like peptide ligases, peptide-binding domain
APY29_18240	SSF53623	MurD-like peptide ligases, catalytic domain
APY29_18240	SSF63418	MurE/MurF N-terminal domain
APY29_18245	SSF53244	MurD-like peptide ligases, peptide-binding domain
APY29_18245	SSF53623	MurD-like peptide ligases, catalytic domain
APY29_18245	SSF63418	MurE/MurF N-terminal domain
APY29_18250	SSF56519	Penicillin binding protein dimerisation domain
APY29_18250	SSF56601	beta-lactamase/transpeptidase-like
APY29_18260	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_18260	SSF81799	Putative methyltransferase TM0872, insert domain
APY29_18265	SSF89447	AbrB/MazE/MraZ-like
APY29_18280	SSF53790	Tetrapyrrole methylase
APY29_18285	SSF53822	Periplasmic binding protein-like I
APY29_18290	SSF52980	Restriction endonuclease-like
APY29_18300	SSF55103	FAD-linked oxidases, C-terminal domain
APY29_18300	SSF56176	FAD-binding/transporter-associated domain-like
APY29_18310	SSF46894	C-terminal effector domain of the bipartite response regulators
APY29_18310	SSF52172	CheY-like
APY29_18315	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_18320	SSF53098	Ribonuclease H-like
APY29_18325	SSF46689	Homeodomain-like
APY29_18340	SSF56784	HAD-like
APY29_18340	SSF81653	Calcium ATPase, transduction domain A
APY29_18340	SSF81665	Calcium ATPase, transmembrane domain M
APY29_18355	SSF81383	F-box domain
APY29_18365	SSF55326	PurM N-terminal domain-like
APY29_18365	SSF56042	PurM C-terminal domain-like
APY29_18370	SSF48013	NusB-like
APY29_18375	SSF52121	Lumazine synthase
APY29_18380	SSF142695	RibA-like
APY29_18380	SSF55821	YrdC/RibB
APY29_18395	SSF53098	Ribonuclease H-like
APY29_18400	SSF46689	Homeodomain-like
APY29_18405	SSF53597	Dihydrofolate reductase-like
APY29_18405	SSF53927	Cytidine deaminase-like
APY29_18410	SSF55729	Acyl-CoA N-acyltransferases (Nat)
APY29_18420	SSF53383	PLP-dependent transferases
APY29_18430	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_18440	SSF103481	Multidrug resistance efflux transporter EmrE
APY29_18445	SSF54506	Diaminopimelate epimerase-like
APY29_18450	SSF46785	"Winged helix" DNA-binding domain
APY29_18450	SSF53383	PLP-dependent transferases
APY29_18460	SSF53474	alpha/beta-Hydrolases
APY29_18465	SSF51316	Mss4-like
APY29_18470	SSF50129	GroES-like
APY29_18470	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_18485	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
APY29_18490	SSF46894	C-terminal effector domain of the bipartite response regulators
APY29_18490	SSF52172	CheY-like
APY29_18495	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_18495	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_18500	SSF55931	Glutamine synthetase/guanido kinase
APY29_18505	SSF46689	Homeodomain-like
APY29_18515	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_18520	SSF46626	Cytochrome c
APY29_18525	SSF52833	Thioredoxin-like
APY29_18530	SSF52833	Thioredoxin-like
APY29_18535	SSF56219	DNase I-like
APY29_18545	SSF53720	ALDH-like
APY29_18550	SSF51905	FAD/NAD(P)-binding domain
APY29_18550	SSF54373	FAD-linked reductases, C-terminal domain
APY29_18555	SSF81301	Nucleotidyltransferase
APY29_18555	SSF81891	Poly A polymerase C-terminal region-like
APY29_18560	SSF56935	Porins
APY29_18565	SSF51338	Composite domain of metallo-dependent hydrolases
APY29_18565	SSF51556	Metallo-dependent hydrolases
APY29_18570	SSF53697	SIS domain
APY29_18575	SSF47413	lambda repressor-like DNA-binding domains
APY29_18575	SSF53822	Periplasmic binding protein-like I
APY29_18580	SSF103473	MFS general substrate transporter
APY29_18585	SSF46785	"Winged helix" DNA-binding domain
APY29_18585	SSF64288	Chorismate lyase-like
APY29_18600	SSF49303	beta-Galactosidase/glucuronidase domain
APY29_18600	SSF49785	Galactose-binding domain-like
APY29_18600	SSF51445	(Trans)glycosidases
APY29_18605	SSF56935	Porins
APY29_18615	SSF103054	General secretion pathway protein M, EpsM
APY29_18620	SSF53067	Actin-like ATPase domain
APY29_18625	SSF158544	GspK insert domain-like
APY29_18625	SSF54523	Pili subunits
APY29_18630	SSF54523	Pili subunits
APY29_18635	SSF54523	Pili subunits
APY29_18640	SSF54523	Pili subunits
APY29_18645	SSF54523	Pili subunits
APY29_18655	SSF160246	EspE N-terminal domain-like
APY29_18655	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_18665	SSF50156	PDZ domain-like
APY29_18670	SSF56935	Porins
APY29_18685	SSF56935	Porins
APY29_18695	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_18700	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_18705	SSF55083	6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
APY29_18710	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_18710	SSF52172	CheY-like
APY29_18710	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_18715	SSF52172	CheY-like
APY29_18720	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_18720	SSF55785	PYP-like sensor domain (PAS domain)
APY29_18720	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_18735	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
APY29_18735	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_18755	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_18760	SSF102114	Radical SAM enzymes
APY29_18765	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
APY29_18770	SSF52374	Nucleotidylyl transferase
APY29_18770	SSF55811	Nudix
APY29_18775	SSF56219	DNase I-like
APY29_18780	SSF46785	"Winged helix" DNA-binding domain
APY29_18780	SSF53850	Periplasmic binding protein-like II
APY29_18790	SSF50156	PDZ domain-like
APY29_18790	SSF52096	ClpP/crotonase
APY29_18795	SSF102114	Radical SAM enzymes
APY29_18800	SSF55681	Class II aaRS and biotin synthetases
APY29_18805	SSF117991	YbeD/HP0495-like
APY29_18815	SSF56601	beta-lactamase/transpeptidase-like
APY29_18815	SSF69189	Penicillin-binding protein associated domain
APY29_18825	SSF110997	Sporulation related repeat
APY29_18825	SSF50685	Barwin-like endoglucanases
APY29_18830	SSF53955	Lysozyme-like
APY29_18835	SSF51126	Pectin lyase-like
APY29_18845	SSF56519	Penicillin binding protein dimerisation domain
APY29_18845	SSF56601	beta-lactamase/transpeptidase-like
APY29_18860	SSF53067	Actin-like ATPase domain
APY29_18865	SSF53613	Ribokinase-like
APY29_18870	SSF46689	Homeodomain-like
APY29_18870	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_18870	SSF55781	GAF domain-like
APY29_18875	SSF56935	Porins
APY29_18880	SSF50129	GroES-like
APY29_18880	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_18885	SSF50974	Nitrous oxide reductase, N-terminal domain
APY29_18890	SSF46626	Cytochrome c
APY29_18895	SSF48403	Ankyrin repeat
APY29_18895	SSF53850	Periplasmic binding protein-like II
APY29_18900	SSF50998	Quinoprotein alcohol dehydrogenase-like
APY29_18905	SSF56784	HAD-like
APY29_18920	SSF48371	ARM repeat
APY29_18920	SSF55486	Metalloproteases ("zincins"), catalytic domain
APY29_18920	SSF63737	Leukotriene A4 hydrolase N-terminal domain
APY29_18925	SSF55073	Nucleotide cyclase
APY29_18930	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_18935	SSF103473	MFS general substrate transporter
APY29_18940	SSF111369	HlyD-like secretion proteins
APY29_18945	SSF55729	Acyl-CoA N-acyltransferases (Nat)
APY29_18950	SSF53927	Cytidine deaminase-like
APY29_18955	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_18960	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
APY29_18965	SSF56349	DNA breaking-rejoining enzymes
APY29_18975	SSF54506	Diaminopimelate epimerase-like
APY29_18990	SSF50993	Peptidase/esterase 'gauge' domain
APY29_18990	SSF53474	alpha/beta-Hydrolases
APY29_18995	SSF53383	PLP-dependent transferases
APY29_19000	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_19005	SSF50993	Peptidase/esterase 'gauge' domain
APY29_19005	SSF53474	alpha/beta-Hydrolases
APY29_19015	SSF50814	Lipocalins
APY29_19020	SSF46785	"Winged helix" DNA-binding domain
APY29_19030	SSF53850	Periplasmic binding protein-like II
APY29_19030	SSF54782	Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
APY29_19035	SSF52172	CheY-like
APY29_19040	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_19045	SSF53474	alpha/beta-Hydrolases
APY29_19050	SSF53448	Nucleotide-diphospho-sugar transferases
APY29_19060	SSF52025	PA domain
APY29_19060	SSF53187	Zn-dependent exopeptidases
APY29_19065	SSF55073	Nucleotide cyclase
APY29_19070	SSF52091	SpoIIaa-like
APY29_19075	SSF49384	Carbohydrate-binding domain
APY29_19075	SSF51445	(Trans)glycosidases
APY29_19080	SSF158472	HAMP domain-like
APY29_19080	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
APY29_19085	SSF55073	Nucleotide cyclase
APY29_19085	SSF55781	GAF domain-like
APY29_19085	SSF55785	PYP-like sensor domain (PAS domain)
APY29_19090	SSF63411	LuxS/MPP-like metallohydrolase
APY29_19095	SSF55781	GAF domain-like
APY29_19110	SSF46946	S13-like H2TH domain
APY29_19110	SSF81624	N-terminal domain of MutM-like DNA repair proteins
APY29_19115	SSF117396	TM1631-like
APY29_19120	SSF48208	Six-hairpin glycosidases
APY29_19125	SSF51219	TRAP-like
APY29_19130	SSF143865	CorA soluble domain-like
APY29_19130	SSF144083	Magnesium transport protein CorA, transmembrane region
APY29_19150	SSF53850	Periplasmic binding protein-like II
APY29_19155	SSF103481	Multidrug resistance efflux transporter EmrE
APY29_19160	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_19175	SSF48452	TPR-like
APY29_19175	SSF55073	Nucleotide cyclase
APY29_19190	SSF53474	alpha/beta-Hydrolases
APY29_19190	SSF82171	DPP6 N-terminal domain-like
APY29_19200	SSF54001	Cysteine proteinases
APY29_19205	SSF53474	alpha/beta-Hydrolases
APY29_19215	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
APY29_19220	SSF47616	GST C-terminal domain-like
APY29_19220	SSF52833	Thioredoxin-like
APY29_19225	SSF117892	Band 7/SPFH domain
APY29_19230	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_19240	SSF46689	Homeodomain-like
APY29_19245	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_19250	SSF53098	Ribonuclease H-like
APY29_19255	SSF46689	Homeodomain-like
APY29_19285	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
APY29_19285	SSF52922	TK C-terminal domain-like
APY29_19290	SSF51445	(Trans)glycosidases
APY29_19295	SSF53474	alpha/beta-Hydrolases
APY29_19305	SSF158472	HAMP domain-like
APY29_19305	SSF81606	PP2C-like
APY29_19310	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_19315	SSF52091	SpoIIaa-like
APY29_19320	SSF56784	HAD-like
APY29_19325	SSF46785	"Winged helix" DNA-binding domain
APY29_19325	SSF48008	GntR ligand-binding domain-like
APY29_19335	SSF52151	FabD/lysophospholipase-like
APY29_19335	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
APY29_19350	SSF52096	ClpP/crotonase
APY29_19355	SSF52096	ClpP/crotonase
APY29_19365	SSF100950	NagB/RpiA/CoA transferase-like
APY29_19370	SSF46785	"Winged helix" DNA-binding domain
APY29_19375	SSF63380	Riboflavin synthase domain-like
APY29_19380	SSF53254	Phosphoglycerate mutase-like
APY29_19390	SSF101874	YceI-like
APY29_19395	SSF55469	FMN-dependent nitroreductase-like
APY29_19405	SSF52743	Subtilisin-like
APY29_19405	SSF54897	Protease propeptides/inhibitors
APY29_19420	SSF81301	Nucleotidyltransferase
APY29_19420	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
APY29_19425	SSF51182	RmlC-like cupins
APY29_19430	SSF63829	Calcium-dependent phosphotriesterase
APY29_19445	SSF51569	Aldolase
APY29_19460	SSF48592	GroEL equatorial domain-like
APY29_19460	SSF52029	GroEL apical domain-like
APY29_19460	SSF54849	GroEL-intermediate domain like
APY29_19465	SSF50129	GroES-like
APY29_19470	SSF54060	His-Me finger endonucleases
APY29_19475	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_19485	SSF55961	Bet v1-like
APY29_19495	SSF46689	Homeodomain-like
APY29_19500	SSF54913	GlnB-like
APY29_19505	SSF52833	Thioredoxin-like
APY29_19505	SSF74863	Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)
APY29_19505	SSF90123	ABC transporter transmembrane region
APY29_19510	SSF52304	Type II 3-dehydroquinate dehydratase
APY29_19515	SSF51230	Single hybrid motif
APY29_19520	SSF158446	IVS-encoded protein-like
APY29_19525	SSF51246	Rudiment single hybrid motif
APY29_19525	SSF52440	PreATP-grasp domain
APY29_19525	SSF56059	Glutathione synthetase ATP-binding domain-like
APY29_19540	SSF53098	Ribonuclease H-like
APY29_19545	SSF46689	Homeodomain-like
APY29_19550	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_19560	SSF47413	lambda repressor-like DNA-binding domains
APY29_19575	SSF46689	Homeodomain-like
APY29_19585	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
APY29_19605	SSF52799	(Phosphotyrosine protein) phosphatases II
APY29_19610	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_19610	SSF53474	alpha/beta-Hydrolases
APY29_19620	SSF52335	Methylglyoxal synthase-like
APY29_19620	SSF53927	Cytidine deaminase-like
APY29_19630	SSF51246	Rudiment single hybrid motif
APY29_19630	SSF52440	PreATP-grasp domain
APY29_19630	SSF56059	Glutathione synthetase ATP-binding domain-like
APY29_19645	SSF103473	MFS general substrate transporter
APY29_19650	SSF46785	"Winged helix" DNA-binding domain
APY29_19650	SSF53850	Periplasmic binding protein-like II
APY29_19655	SSF103473	MFS general substrate transporter
APY29_19655	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
APY29_19675	SSF55811	Nudix
APY29_19680	SSF53474	alpha/beta-Hydrolases
APY29_19690	SSF89360	HesB-like domain
APY29_19710	SSF141868	EAL domain-like
APY29_19710	SSF52172	CheY-like
APY29_19710	SSF55073	Nucleotide cyclase
APY29_19715	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
APY29_19715	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_19715	SSF52172	CheY-like
APY29_19715	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_19720	SSF47240	Ferritin-like
APY29_19730	SSF55811	Nudix
APY29_19745	SSF54211	Ribosomal protein S5 domain 2-like
APY29_19750	SSF52161	Ribosomal protein L13
APY29_19755	SSF47240	Ferritin-like
APY29_19760	SSF103481	Multidrug resistance efflux transporter EmrE
APY29_19765	SSF56276	S-adenosylmethionine decarboxylase
APY29_19770	SSF46785	"Winged helix" DNA-binding domain
APY29_19770	SSF51206	cAMP-binding domain-like
APY29_19775	SSF56784	HAD-like
APY29_19780	SSF51366	Ribulose-phoshate binding barrel
APY29_19785	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
APY29_19785	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
APY29_19790	SSF50475	FMN-binding split barrel
APY29_19795	SSF52317	Class I glutamine amidotransferase-like
APY29_19805	SSF56322	ADC synthase
APY29_19810	SSF111331	NAD kinase/diacylglycerol kinase-like
APY29_19815	SSF55729	Acyl-CoA N-acyltransferases (Nat)
APY29_19820	SSF51366	Ribulose-phoshate binding barrel
APY29_19825	SSF56925	OMPA-like
APY29_19830	SSF46565	Chaperone J-domain
APY29_19835	SSF56104	SAICAR synthase-like
APY29_19855	SSF47090	PGBD-like
APY29_19855	SSF51261	Duplicated hybrid motif
APY29_19855	SSF53955	Lysozyme-like
APY29_19860	SSF55486	Metalloproteases ("zincins"), catalytic domain
APY29_19870	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_19915	SSF51182	RmlC-like cupins
APY29_19920	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
APY29_19925	SSF46785	"Winged helix" DNA-binding domain
APY29_19930	SSF52833	Thioredoxin-like
APY29_19935	SSF103473	MFS general substrate transporter
APY29_19940	SSF140959	Indolic compounds 2,3-dioxygenase-like
APY29_19945	SSF141072	CalX-like
APY29_19945	SSF56219	DNase I-like
APY29_19945	SSF88633	Positive stranded ssRNA viruses
APY29_19950	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
APY29_19955	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
APY29_19955	SSF52922	TK C-terminal domain-like
APY29_19960	SSF50044	SH3-domain
APY29_19965	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
APY29_19965	SSF51230	Single hybrid motif
APY29_19965	SSF52777	CoA-dependent acyltransferases
APY29_19970	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_19980	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_19985	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
APY29_19985	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
APY29_19985	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
APY29_19995	SSF46689	Homeodomain-like
APY29_19995	SSF48498	Tetracyclin repressor-like, C-terminal domain
APY29_20015	SSF51905	FAD/NAD(P)-binding domain
APY29_20020	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_20025	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_20030	SSF51011	Glycosyl hydrolase domain
APY29_20030	SSF51445	(Trans)glycosidases
APY29_20030	SSF81296	E set domains
APY29_20040	SSF51445	(Trans)glycosidases
APY29_20045	SSF51445	(Trans)glycosidases
APY29_20050	SSF51445	(Trans)glycosidases
APY29_20050	SSF81296	E set domains
APY29_20055	SSF51011	Glycosyl hydrolase domain
APY29_20055	SSF51445	(Trans)glycosidases
APY29_20055	SSF81296	E set domains
APY29_20060	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
APY29_20065	SSF55073	Nucleotide cyclase
APY29_20075	SSF56112	Protein kinase-like (PK-like)
APY29_20080	SSF53649	Alkaline phosphatase-like
APY29_20085	SSF50182	Sm-like ribonucleoproteins
APY29_20085	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
APY29_20085	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
APY29_20090	SSF69754	Ribosome binding protein Y (YfiA homologue)
APY29_20105	SSF53955	Lysozyme-like
APY29_20130	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_20160	SSF160544	EscU C-terminal domain-like
APY29_20175	SSF101801	Surface presentation of antigens (SPOA)
APY29_20210	SSF69635	Type III secretory system chaperone-like
APY29_20235	SSF53271	PRTase-like
APY29_20240	SSF102114	Radical SAM enzymes
APY29_20245	SSF53383	PLP-dependent transferases
APY29_20255	SSF53474	alpha/beta-Hydrolases
APY29_20260	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_20265	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_20270	SSF51197	Clavaminate synthase-like
APY29_20275	SSF54427	NTF2-like
APY29_20285	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
APY29_20295	SSF51905	FAD/NAD(P)-binding domain
APY29_20310	SSF56112	Protein kinase-like (PK-like)
APY29_20315	SSF46785	"Winged helix" DNA-binding domain
APY29_20315	SSF55781	GAF domain-like
APY29_20320	SSF53474	alpha/beta-Hydrolases
APY29_20325	SSF69118	AhpD-like
APY29_20330	SSF53474	alpha/beta-Hydrolases
APY29_20335	SSF48557	L-aspartase-like
APY29_20340	SSF49482	Aromatic compound dioxygenase
APY29_20350	SSF53901	Thiolase-like
APY29_20355	SSF100950	NagB/RpiA/CoA transferase-like
APY29_20360	SSF100950	NagB/RpiA/CoA transferase-like
APY29_20365	SSF50022	ISP domain
APY29_20365	SSF55961	Bet v1-like
APY29_20370	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
APY29_20370	SSF54292	2Fe-2S ferredoxin-like
APY29_20370	SSF63380	Riboflavin synthase domain-like
APY29_20375	SSF100950	NagB/RpiA/CoA transferase-like
APY29_20375	SSF46785	"Winged helix" DNA-binding domain
APY29_20380	SSF51905	FAD/NAD(P)-binding domain
APY29_20380	SSF54373	FAD-linked reductases, C-terminal domain
APY29_20385	SSF81338	Aquaporin-like
APY29_20390	SSF53067	Actin-like ATPase domain
APY29_20395	SSF53098	Ribonuclease H-like
APY29_20400	SSF46689	Homeodomain-like
APY29_20405	SSF54427	NTF2-like
APY29_20410	SSF51905	FAD/NAD(P)-binding domain
APY29_20410	SSF54373	FAD-linked reductases, C-terminal domain
APY29_20415	SSF46689	Homeodomain-like
APY29_20415	SSF51215	Regulatory protein AraC
APY29_20420	SSF53720	ALDH-like
APY29_20425	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_20435	SSF46785	"Winged helix" DNA-binding domain
APY29_20440	SSF109604	HD-domain/PDEase-like
APY29_20445	SSF103473	MFS general substrate transporter
APY29_20455	SSF51161	Trimeric LpxA-like enzymes
APY29_20470	SSF51445	(Trans)glycosidases
APY29_20475	SSF143975	IlvD/EDD N-terminal domain-like
APY29_20475	SSF52016	LeuD/IlvD-like
APY29_20490	SSF53098	Ribonuclease H-like
APY29_20495	SSF46689	Homeodomain-like
APY29_20505	SSF53098	Ribonuclease H-like
APY29_20510	SSF46689	Homeodomain-like
APY29_20515	SSF55961	Bet v1-like
APY29_20520	SSF53098	Ribonuclease H-like
APY29_20525	SSF46689	Homeodomain-like
APY29_20540	SSF46785	"Winged helix" DNA-binding domain
APY29_20545	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_20560	SSF56935	Porins
APY29_20570	SSF51726	UROD/MetE-like
APY29_20580	SSF52218	Flavoproteins
APY29_20585	SSF46785	"Winged helix" DNA-binding domain
APY29_20585	SSF53850	Periplasmic binding protein-like II
APY29_20595	SSF51730	FAD-linked oxidoreductase
APY29_20605	SSF56954	Outer membrane efflux proteins (OEP)
APY29_20615	SSF111369	HlyD-like secretion proteins
APY29_20620	SSF158472	HAMP domain-like
APY29_20620	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_20620	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_20625	SSF46894	C-terminal effector domain of the bipartite response regulators
APY29_20625	SSF52172	CheY-like
APY29_20630	SSF53328	Formyltransferase
APY29_20630	SSF55021	ACT-like
APY29_20640	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
APY29_20640	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_20645	SSF51395	FMN-linked oxidoreductases
APY29_20650	SSF52467	DHS-like NAD/FAD-binding domain
APY29_20655	SSF53474	alpha/beta-Hydrolases
APY29_20660	SSF46955	Putative DNA-binding domain
APY29_20665	SSF103473	MFS general substrate transporter
APY29_20675	SSF46689	Homeodomain-like
APY29_20680	SSF53098	Ribonuclease H-like
APY29_20690	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
APY29_20695	SSF51556	Metallo-dependent hydrolases
APY29_20700	SSF46785	"Winged helix" DNA-binding domain
APY29_20700	SSF53850	Periplasmic binding protein-like II
APY29_20705	SSF50022	ISP domain
APY29_20705	SSF55961	Bet v1-like
APY29_20710	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
APY29_20710	SSF54292	2Fe-2S ferredoxin-like
APY29_20710	SSF63380	Riboflavin synthase domain-like
APY29_20720	SSF51556	Metallo-dependent hydrolases
APY29_20725	SSF53590	Nucleoside hydrolase
APY29_20730	SSF75304	Amidase signature (AS) enzymes
APY29_20735	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
APY29_20745	SSF103473	MFS general substrate transporter
APY29_20750	SSF46785	"Winged helix" DNA-binding domain
APY29_20750	SSF53850	Periplasmic binding protein-like II
APY29_20755	SSF53187	Zn-dependent exopeptidases
APY29_20755	SSF55031	Bacterial exopeptidase dimerisation domain
APY29_20760	SSF53383	PLP-dependent transferases
APY29_20765	SSF88713	Glycoside hydrolase/deacetylase
APY29_20770	SSF54427	NTF2-like
APY29_20775	SSF158694	UraD-Like
APY29_20780	SSF51905	FAD/NAD(P)-binding domain
APY29_20785	SSF49472	Transthyretin (synonym: prealbumin)
APY29_20795	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_20805	SSF49452	Starch-binding domain-like
APY29_20805	SSF56935	Porins
APY29_20810	SSF55120	Pseudouridine synthase
APY29_20815	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_20820	SSF51430	NAD(P)-linked oxidoreductase
APY29_20825	SSF50129	GroES-like
APY29_20825	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_20845	SSF53474	alpha/beta-Hydrolases
APY29_20855	SSF82784	OsmC-like
APY29_20860	SSF46785	"Winged helix" DNA-binding domain
APY29_20865	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_20870	SSF53474	alpha/beta-Hydrolases
APY29_20875	SSF103481	Multidrug resistance efflux transporter EmrE
APY29_20905	SSF56219	DNase I-like
APY29_20910	SSF46626	Cytochrome c
APY29_20915	SSF49478	Cna protein B-type domain
APY29_20945	SSF46689	Homeodomain-like
APY29_20945	SSF48498	Tetracyclin repressor-like, C-terminal domain
APY29_20950	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
APY29_20950	SSF56645	Acyl-CoA dehydrogenase NM domain-like
APY29_20955	SSF52096	ClpP/crotonase
APY29_20960	SSF51230	Single hybrid motif
APY29_20960	SSF51246	Rudiment single hybrid motif
APY29_20960	SSF52440	PreATP-grasp domain
APY29_20960	SSF56059	Glutathione synthetase ATP-binding domain-like
APY29_20965	SSF53474	alpha/beta-Hydrolases
APY29_20965	SSF82171	DPP6 N-terminal domain-like
APY29_20970	SSF55469	FMN-dependent nitroreductase-like
APY29_20980	SSF48452	TPR-like
APY29_20980	SSF55073	Nucleotide cyclase
APY29_20985	SSF51206	cAMP-binding domain-like
APY29_20985	SSF55073	Nucleotide cyclase
APY29_20990	SSF51621	Phosphoenolpyruvate/pyruvate domain
APY29_20995	SSF51645	Malate synthase G
APY29_21000	SSF46785	"Winged helix" DNA-binding domain
APY29_21000	SSF53850	Periplasmic binding protein-like II
APY29_21015	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
APY29_21020	SSF46689	Homeodomain-like
APY29_21020	SSF48498	Tetracyclin repressor-like, C-terminal domain
APY29_21030	SSF56281	Metallo-hydrolase/oxidoreductase
APY29_21035	SSF55486	Metalloproteases ("zincins"), catalytic domain
APY29_21040	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
APY29_21045	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
APY29_21050	SSF110916	Peptidyl-tRNA hydrolase domain-like
APY29_21060	SSF55120	Pseudouridine synthase
APY29_21065	SSF51182	RmlC-like cupins
APY29_21070	SSF56112	Protein kinase-like (PK-like)
APY29_21080	SSF52440	PreATP-grasp domain
APY29_21080	SSF56059	Glutathione synthetase ATP-binding domain-like
APY29_21095	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_21100	SSF56801	Acetyl-CoA synthetase-like
APY29_21110	SSF53474	alpha/beta-Hydrolases
APY29_21120	SSF53901	Thiolase-like
APY29_21135	SSF75217	alpha/beta knot
APY29_21140	SSF103473	MFS general substrate transporter
APY29_21160	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_21160	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_21165	SSF52467	DHS-like NAD/FAD-binding domain
APY29_21165	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
APY29_21170	SSF56935	Porins
APY29_21175	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
APY29_21175	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_21180	SSF54611	SecB-like
APY29_21185	SSF52821	Rhodanese/Cell cycle control phosphatase
APY29_21195	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
APY29_21205	SSF69618	HemD-like
APY29_21215	SSF48452	TPR-like
APY29_21220	SSF53901	Thiolase-like
APY29_21235	SSF49329	Cu,Zn superoxide dismutase-like
APY29_21240	SSF49329	Cu,Zn superoxide dismutase-like
APY29_21245	SSF46689	Homeodomain-like
APY29_21245	SSF52172	CheY-like
APY29_21245	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_21250	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_21250	SSF55785	PYP-like sensor domain (PAS domain)
APY29_21250	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_21255	SSF111352	Ammonium transporter
APY29_21260	SSF54913	GlnB-like
APY29_21265	SSF54368	Glutamine synthetase, N-terminal domain
APY29_21265	SSF55931	Glutamine synthetase/guanido kinase
APY29_21280	SSF49777	PEBP-like
APY29_21285	SSF48452	TPR-like
APY29_21295	SSF53474	alpha/beta-Hydrolases
APY29_21300	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
APY29_21305	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
APY29_21310	SSF56024	Phospholipase D/nuclease
APY29_21315	SSF101874	YceI-like
APY29_21320	SSF53254	Phosphoglycerate mutase-like
APY29_21325	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_21340	SSF48452	TPR-like
APY29_21345	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
APY29_21345	SSF52922	TK C-terminal domain-like
APY29_21345	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
APY29_21350	SSF47413	lambda repressor-like DNA-binding domains
APY29_21360	SSF46785	"Winged helix" DNA-binding domain
APY29_21365	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_21370	SSF56436	C-type lectin-like
APY29_21375	SSF53383	PLP-dependent transferases
APY29_21380	SSF161098	MetI-like
APY29_21380	SSF53850	Periplasmic binding protein-like II
APY29_21385	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_21390	SSF47473	EF-hand
APY29_21400	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_21405	SSF51219	TRAP-like
APY29_21410	SSF52151	FabD/lysophospholipase-like
APY29_21415	SSF56935	Porins
APY29_21420	SSF46785	"Winged helix" DNA-binding domain
APY29_21420	SSF54909	Dimeric alpha+beta barrel
APY29_21425	SSF56534	Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
APY29_21435	SSF55486	Metalloproteases ("zincins"), catalytic domain
APY29_21440	SSF51182	RmlC-like cupins
APY29_21440	SSF52266	SGNH hydrolase
APY29_21445	SSF89623	Ribose/Galactose isomerase RpiB/AlsB
APY29_21450	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_21455	SSF51182	RmlC-like cupins
APY29_21460	SSF47413	lambda repressor-like DNA-binding domains
APY29_21460	SSF53822	Periplasmic binding protein-like I
APY29_21465	SSF49899	Concanavalin A-like lectins/glucanases
APY29_21465	SSF75005	Arabinanase/levansucrase/invertase
APY29_21485	SSF56529	FAH
APY29_21490	SSF53474	alpha/beta-Hydrolases
APY29_21495	SSF53474	alpha/beta-Hydrolases
APY29_21500	SSF51430	NAD(P)-linked oxidoreductase
APY29_21520	SSF56935	Porins
APY29_21525	SSF48452	TPR-like
APY29_21525	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_21530	SSF109604	HD-domain/PDEase-like
APY29_21535	SSF55681	Class II aaRS and biotin synthetases
APY29_21540	SSF160246	EspE N-terminal domain-like
APY29_21540	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_21550	SSF52317	Class I glutamine amidotransferase-like
APY29_21580	SSF53800	Chelatase
APY29_21585	SSF53474	alpha/beta-Hydrolases
APY29_21605	SSF52402	Adenine nucleotide alpha hydrolases-like
APY29_21610	SSF51658	Xylose isomerase-like
APY29_21615	SSF47413	lambda repressor-like DNA-binding domains
APY29_21615	SSF53822	Periplasmic binding protein-like I
APY29_21620	SSF51445	(Trans)glycosidases
APY29_21620	SSF55545	beta-N-acetylhexosaminidase-like domain
APY29_21625	SSF49785	Galactose-binding domain-like
APY29_21625	SSF52266	SGNH hydrolase
APY29_21630	SSF51604	Enolase C-terminal domain-like
APY29_21630	SSF54826	Enolase N-terminal domain-like
APY29_21635	SSF49899	Concanavalin A-like lectins/glucanases
APY29_21635	SSF75005	Arabinanase/levansucrase/invertase
APY29_21645	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
APY29_21645	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_21650	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
APY29_21665	SSF46689	Homeodomain-like
APY29_21675	SSF103473	MFS general substrate transporter
APY29_21680	SSF53639	AraD/HMP-PK domain-like
APY29_21685	SSF53383	PLP-dependent transferases
APY29_21690	SSF53639	AraD/HMP-PK domain-like
APY29_21695	SSF53067	Actin-like ATPase domain
APY29_21710	SSF63829	Calcium-dependent phosphotriesterase
APY29_21715	SSF51445	(Trans)glycosidases
APY29_21720	SSF49303	beta-Galactosidase/glucuronidase domain
APY29_21720	SSF49785	Galactose-binding domain-like
APY29_21720	SSF51445	(Trans)glycosidases
APY29_21725	SSF51556	Metallo-dependent hydrolases
APY29_21735	SSF103473	MFS general substrate transporter
APY29_21740	SSF51445	(Trans)glycosidases
APY29_21745	SSF103473	MFS general substrate transporter
APY29_21750	SSF56935	Porins
APY29_21755	SSF103473	MFS general substrate transporter
APY29_21760	SSF75005	Arabinanase/levansucrase/invertase
APY29_21765	SSF50814	Lipocalins
APY29_21770	SSF89946	Hypothetical protein VC0424
APY29_21785	SSF46689	Homeodomain-like
APY29_21790	SSF53098	Ribonuclease H-like
APY29_21795	SSF53098	Ribonuclease H-like
APY29_21800	SSF46689	Homeodomain-like
APY29_21825	SSF50129	GroES-like
APY29_21825	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_21830	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
APY29_21840	SSF47413	lambda repressor-like DNA-binding domains
APY29_21840	SSF53822	Periplasmic binding protein-like I
APY29_21845	SSF49452	Starch-binding domain-like
APY29_21845	SSF56935	Porins
APY29_21855	SSF49452	Starch-binding domain-like
APY29_21855	SSF56935	Porins
APY29_21860	SSF51905	FAD/NAD(P)-binding domain
APY29_21865	SSF51366	Ribulose-phoshate binding barrel
APY29_21870	SSF56784	HAD-like
APY29_21875	SSF46785	"Winged helix" DNA-binding domain
APY29_21885	SSF55729	Acyl-CoA N-acyltransferases (Nat)
APY29_21890	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_21895	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_21895	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
APY29_21900	SSF47384	Homodimeric domain of signal transducing histidine kinase
APY29_21900	SSF55781	GAF domain-like
APY29_21900	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
APY29_21905	SSF74650	Galactose mutarotase-like
APY29_21905	SSF81296	E set domains
APY29_21915	SSF46946	S13-like H2TH domain
APY29_21915	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
APY29_21915	SSF81624	N-terminal domain of MutM-like DNA repair proteins
APY29_21950	SSF55781	GAF domain-like
APY29_21950	SSF55785	PYP-like sensor domain (PAS domain)
APY29_21955	SSF48613	Heme oxygenase-like
APY29_21960	SSF103473	MFS general substrate transporter
APY29_21965	SSF47090	PGBD-like
APY29_21965	SSF53955	Lysozyme-like
APY29_21965	SSF74650	Galactose mutarotase-like
APY29_21975	SSF54427	NTF2-like
APY29_21985	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_22000	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
APY29_22005	SSF46785	"Winged helix" DNA-binding domain
APY29_22015	SSF111369	HlyD-like secretion proteins
APY29_22020	SSF56954	Outer membrane efflux proteins (OEP)
APY29_22030	SSF103473	MFS general substrate transporter
APY29_22035	SSF56024	Phospholipase D/nuclease
APY29_22055	SSF47598	Ribbon-helix-helix
APY29_22060	SSF46689	Homeodomain-like
APY29_22070	SSF88723	PIN domain-like
APY29_22075	SSF53098	Ribonuclease H-like
APY29_22080	SSF46689	Homeodomain-like
APY29_22085	SSF53474	alpha/beta-Hydrolases
APY29_22105	SSF55120	Pseudouridine synthase
APY29_22110	SSF51126	Pectin lyase-like
APY29_22115	SSF160467	PH0987 N-terminal domain-like
APY29_22115	SSF50891	Cyclophilin-like
APY29_22115	SSF51230	Single hybrid motif
APY29_22115	SSF51246	Rudiment single hybrid motif
APY29_22115	SSF52440	PreATP-grasp domain
APY29_22115	SSF56059	Glutathione synthetase ATP-binding domain-like
APY29_22120	SSF75304	Amidase signature (AS) enzymes
APY29_22140	SSF53590	Nucleoside hydrolase
APY29_22145	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_22150	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_22150	SSF52980	Restriction endonuclease-like
APY29_22155	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_22155	SSF52980	Restriction endonuclease-like
APY29_22170	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_22190	SSF52091	SpoIIaa-like
APY29_22205	SSF52833	Thioredoxin-like
APY29_22220	SSF50129	GroES-like
APY29_22220	SSF51735	NAD(P)-binding Rossmann-fold domains
APY29_22225	SSF46785	"Winged helix" DNA-binding domain
APY29_22225	SSF53850	Periplasmic binding protein-like II
APY29_22235	SSF47616	GST C-terminal domain-like
APY29_22235	SSF52833	Thioredoxin-like
APY29_22250	SSF48208	Six-hairpin glycosidases
APY29_22260	SSF55073	Nucleotide cyclase
APY29_22260	SSF55781	GAF domain-like
APY29_22260	SSF55785	PYP-like sensor domain (PAS domain)
APY29_22270	SSF51161	Trimeric LpxA-like enzymes
APY29_22280	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
APY29_22280	SSF88697	PUA domain-like
APY29_22290	SSF144091	Rhomboid-like
APY29_22295	SSF51695	PLC-like phosphodiesterases
APY29_22300	SSF56935	Porins
APY29_22305	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
APY29_22310	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_22315	SSF48452	TPR-like
APY29_22315	SSF52129	Caspase-like
APY29_22315	SSF88713	Glycoside hydrolase/deacetylase
APY29_22330	SSF54211	Ribosomal protein S5 domain 2-like
APY29_22355	SSF53098	Ribonuclease H-like
APY29_22360	SSF46689	Homeodomain-like
APY29_22375	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_22385	SSF88723	PIN domain-like
APY29_22390	SSF89447	AbrB/MazE/MraZ-like
APY29_22405	SSF47090	PGBD-like
APY29_22405	SSF53955	Lysozyme-like
APY29_22415	SSF46689	Homeodomain-like
APY29_22425	SSF53041	Resolvase-like
APY29_22435	SSF88723	PIN domain-like
APY29_22445	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_22465	SSF53098	Ribonuclease H-like
APY29_22470	SSF46689	Homeodomain-like
APY29_22475	SSF46689	Homeodomain-like
APY29_22480	SSF53098	Ribonuclease H-like
APY29_22495	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_22500	SSF47598	Ribbon-helix-helix
APY29_22515	SSF53041	Resolvase-like
APY29_22525	SSF53098	Ribonuclease H-like
APY29_22530	SSF46689	Homeodomain-like
APY29_22555	SSF53098	Ribonuclease H-like
APY29_22560	SSF46689	Homeodomain-like
APY29_22580	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_22590	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_22595	SSF47598	Ribbon-helix-helix
APY29_22635	SSF53098	Ribonuclease H-like
APY29_22640	SSF46689	Homeodomain-like
APY29_22645	SSF46689	Homeodomain-like
APY29_22650	SSF53098	Ribonuclease H-like
APY29_22660	SSF53098	Ribonuclease H-like
APY29_22665	SSF46689	Homeodomain-like
APY29_22680	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_22685	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_22685	SSF55464	Origin of replication-binding domain, RBD-like
APY29_22700	SSF53098	Ribonuclease H-like
APY29_22705	SSF46689	Homeodomain-like
APY29_22710	SSF47598	Ribbon-helix-helix
APY29_22715	SSF52540	P-loop containing nucleoside triphosphate hydrolases
APY29_22725	SSF46689	Homeodomain-like
APY29_22730	SSF53098	Ribonuclease H-like