APY30_00005	PF00308	Bacterial dnaA  protein
APY30_00005	PF08299	Bacterial dnaA protein helix-turn-helix
APY30_00005	PF11638	DnaA N-terminal domain
APY30_00010	PF00712	DNA polymerase III beta subunit, N-terminal domain
APY30_00010	PF02767	DNA polymerase III beta subunit, central domain
APY30_00010	PF02768	DNA polymerase III beta subunit, C-terminal domain
APY30_00015	PF02463	RecF/RecN/SMC N terminal domain
APY30_00020	PF00204	DNA gyrase B
APY30_00020	PF00986	DNA gyrase B subunit, carboxyl terminus
APY30_00020	PF01751	Toprim domain
APY30_00020	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_00025	PF02517	CAAX protease self-immunity
APY30_00030	PF01435	Peptidase family M48
APY30_00035	PF09295	ChAPs (Chs5p-Arf1p-binding proteins)
APY30_00040	PF03544	Gram-negative bacterial TonB protein C-terminal
APY30_00045	PF01618	APY30_00045
APY30_00050	PF02472	Biopolymer transport protein ExbD/TolR
APY30_00055	PF02472	Biopolymer transport protein ExbD/TolR
APY30_00060	PF03740	Pyridoxal phosphate biosynthesis protein PdxJ
APY30_00070	PF13091	PLD-like domain
APY30_00075	PF01527	Transposase
APY30_00080	PF00665	Integrase core domain
APY30_00105	PF07791	APY30_00105
APY30_00110	PF04002	RadC-like JAB domain
APY30_00120	PF01527	Transposase
APY30_00125	PF00665	Integrase core domain
APY30_00125	PF13276	APY30_00125
APY30_00130	PF01527	Transposase
APY30_00135	PF13276	APY30_00135
APY30_00135	PF13683	APY30_00135
APY30_00140	PF07751	APY30_00140
APY30_00145	PF01527	Transposase
APY30_00155	PF00665	Integrase core domain
APY30_00160	PF01527	Transposase
APY30_00170	PF00589	Phage integrase family
APY30_00180	PF01694	Rhomboid family
APY30_00185	PF08850	APY30_00185
APY30_00195	PF03572	Peptidase family S41
APY30_00195	PF13180	PDZ domain
APY30_00200	PF01551	Peptidase family M23
APY30_00210	PF02225	PA domain
APY30_00210	PF04389	Peptidase family M28
APY30_00215	PF13670	APY30_00215
APY30_00220	PF00150	Cellulase (glycosyl hydrolase family 5)
APY30_00225	PF00150	Cellulase (glycosyl hydrolase family 5)
APY30_00235	PF00150	Cellulase (glycosyl hydrolase family 5)
APY30_00240	PF00107	Zinc-binding dehydrogenase
APY30_00240	PF08240	Alcohol dehydrogenase GroES-like domain
APY30_00245	PF07992	Pyridine nucleotide-disulphide oxidoreductase
APY30_00245	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
APY30_00250	PF00310	Glutamine amidotransferases class-II
APY30_00250	PF01493	GXGXG motif
APY30_00250	PF01645	Conserved region in glutamate synthase
APY30_00250	PF04898	Glutamate synthase central domain
APY30_00255	PF11720	Peptidase inhibitor I78 family
APY30_00260	PF01028	Eukaryotic DNA topoisomerase I, catalytic core
APY30_00275	PF05368	NmrA-like family
APY30_00285	PF00534	Glycosyl transferases group 1
APY30_00285	PF13439	Glycosyltransferase Family 4
APY30_00290	PF00534	Glycosyl transferases group 1
APY30_00290	PF13439	Glycosyltransferase Family 4
APY30_00295	PF02397	APY30_00295
APY30_00295	PF13727	CoA-binding domain
APY30_00300	PF02350	UDP-N-acetylglucosamine 2-epimerase
APY30_00305	PF04932	APY30_00305
APY30_00310	PF03808	APY30_00310
APY30_00315	PF13439	Glycosyltransferase Family 4
APY30_00315	PF13692	Glycosyl transferases group 1
APY30_00330	PF13489	Methyltransferase domain
APY30_00335	PF00733	Asparagine synthase
APY30_00335	PF13537	Glutamine amidotransferase domain
APY30_00345	PF05711	Macrocin-O-methyltransferase (TylF)
APY30_00350	PF01370	NAD dependent epimerase/dehydratase family
APY30_00360	PF01943	APY30_00360
APY30_00360	PF14667	Polysaccharide biosynthesis C-terminal domain
APY30_00365	PF00005	ABC transporter
APY30_00365	PF00664	ABC transporter transmembrane region
APY30_00370	PF13471	APY30_00370
APY30_00380	PF00733	Asparagine synthase
APY30_00380	PF13537	Glutamine amidotransferase domain
APY30_00385	PF13847	Methyltransferase domain
APY30_00390	PF05402	Coenzyme PQQ synthesis protein D (PqqD)
APY30_00400	PF00685	Sulfotransferase domain
APY30_00405	PF13673	Acetyltransferase (GNAT) domain
APY30_00410	PF07484	Phage Tail Collar Domain
APY30_00415	PF07484	Phage Tail Collar Domain
APY30_00420	PF07484	Phage Tail Collar Domain
APY30_00425	PF14907	Uncharacterised nucleotidyltransferase
APY30_00430	PF03965	Penicillinase repressor
APY30_00435	PF05569	BlaR1 peptidase M56
APY30_00445	PF03435	Saccharopine dehydrogenase
APY30_00450	PF08975	Domain of unknown function (DUF1868)
APY30_00455	PF00593	TonB dependent receptor
APY30_00455	PF07715	TonB-dependent Receptor Plug Domain
APY30_00460	PF00480	ROK family
APY30_00465	PF03009	Glycerophosphoryl diester phosphodiesterase family
APY30_00470	PF13482	RNase_H superfamily
APY30_00475	PF00270	DEAD/DEAH box helicase
APY30_00475	PF00271	Helicase conserved C-terminal domain
APY30_00475	PF09369	APY30_00475
APY30_00480	PF03006	APY30_00480
APY30_00485	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
APY30_00490	PF05016	Plasmid stabilisation system protein
APY30_00495	PF00106	short chain dehydrogenase
APY30_00500	PF13561	Enoyl-(Acyl carrier protein) reductase
APY30_00505	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
APY30_00505	PF03466	LysR substrate binding domain
APY30_00510	PF00665	Integrase core domain
APY30_00515	PF01527	Transposase
APY30_00525	PF13385	Concanavalin A-like lectin/glucanases superfamily
APY30_00530	PF00593	TonB dependent receptor
APY30_00530	PF07715	TonB-dependent Receptor Plug Domain
APY30_00535	PF00294	pfkB family carbohydrate kinase
APY30_00545	PF07055	Enoyl reductase FAD binding domain
APY30_00545	PF12241	Trans-2-enoyl-CoA reductase catalytic region
APY30_00545	PF12242	NAD(P)H binding domain of trans-2-enoyl-CoA reductase
APY30_00550	PF00486	Transcriptional regulatory protein, C terminal
APY30_00550	PF13191	AAA ATPase domain
APY30_00570	PF00072	Response regulator receiver domain
APY30_00570	PF00196	Bacterial regulatory proteins, luxR family
APY30_00575	PF07730	Histidine kinase
APY30_00580	PF00144	Beta-lactamase
APY30_00585	PF01070	FMN-dependent dehydrogenase
APY30_00590	PF02735	Ku70/Ku80 beta-barrel domain
APY30_00605	PF05610	APY30_00605
APY30_00610	PF01526	APY30_00610
APY30_00615	PF13369	APY30_00615
APY30_00640	PF07883	Cupin domain
APY30_00650	PF00593	TonB dependent receptor
APY30_00650	PF07715	TonB-dependent Receptor Plug Domain
APY30_00655	PF00155	Aminotransferase class I and II
APY30_00660	PF00316	Fructose-1-6-bisphosphatase
APY30_00670	PF01523	Putative modulator of DNA gyrase
APY30_00675	PF01523	Putative modulator of DNA gyrase
APY30_00680	PF01523	Putative modulator of DNA gyrase
APY30_00685	PF13709	Domain of unknown function (DUF4159)
APY30_00690	PF07726	ATPase family associated with various cellular activities (AAA)
APY30_00695	PF01882	APY30_00695
APY30_00700	PF07584	APY30_00700
APY30_00715	PF06080	APY30_00715
APY30_00720	PF12787	APY30_00720
APY30_00725	PF08327	Activator of Hsp90 ATPase homolog 1-like protein
APY30_00740	PF00085	Thioredoxin
APY30_00745	PF10116	APY30_00745
APY30_00760	PF00293	NUDIX domain
APY30_00765	PF13460	NADH(P)-binding
APY30_00770	PF01527	Transposase
APY30_00775	PF00665	Integrase core domain
APY30_00785	PF12802	MarR family
APY30_00790	PF00128	Alpha amylase, catalytic domain
APY30_00790	PF11896	Domain of unknown function (DUF3416)
APY30_00795	PF00128	Alpha amylase, catalytic domain
APY30_00795	PF16657	APY30_00795
APY30_00800	PF00128	Alpha amylase, catalytic domain
APY30_00800	PF02806	Alpha amylase, C-terminal all-beta domain
APY30_00800	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
APY30_00805	PF12850	Calcineurin-like phosphoesterase superfamily domain
APY30_00815	PF01527	Transposase
APY30_00820	PF00665	Integrase core domain
APY30_00835	PF13360	PQQ-like domain
APY30_00840	PF13671	AAA domain
APY30_00845	PF13347	MFS/sugar transport protein
APY30_00850	PF06165	Glycosyltransferase family 36
APY30_00850	PF17167	APY30_00850
APY30_00855	PF15979	APY30_00855
APY30_00865	PF00072	Response regulator receiver domain
APY30_00865	PF00512	His Kinase A (phospho-acceptor) domain
APY30_00865	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_00865	PF12860	APY30_00865
APY30_00870	PF02659	APY30_00870
APY30_00880	PF01614	Bacterial transcriptional regulator
APY30_00880	PF09339	IclR helix-turn-helix domain
APY30_00885	PF07690	Major Facilitator Superfamily
APY30_00890	PF05336	Domain of unknown function (DUF718)
APY30_00895	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
APY30_00895	PF13378	Enolase C-terminal domain-like
APY30_00900	PF01557	Fumarylacetoacetate (FAA) hydrolase family
APY30_00905	PF13561	Enoyl-(Acyl carrier protein) reductase
APY30_00910	PF04909	Amidohydrolase
APY30_00915	PF00248	Aldo/keto reductase family
APY30_00935	PF08534	Redoxin
APY30_00945	PF14415	Domain of unknown function (DUF4424)
APY30_00950	PF00072	Response regulator receiver domain
APY30_00950	PF00196	Bacterial regulatory proteins, luxR family
APY30_00955	PF00501	AMP-binding enzyme
APY30_00955	PF13193	AMP-binding enzyme C-terminal domain
APY30_00955	PF16177	APY30_00955
APY30_00965	PF04341	APY30_00965
APY30_00970	PF00474	Sodium:solute symporter family
APY30_00975	PF03009	Glycerophosphoryl diester phosphodiesterase family
APY30_00980	PF13616	PPIC-type PPIASE domain
APY30_00990	PF00480	ROK family
APY30_00995	PF03372	Endonuclease/Exonuclease/phosphatase family
APY30_01000	PF04828	Glutathione-dependent formaldehyde-activating enzyme
APY30_01005	PF04226	APY30_01005
APY30_01015	PF01648	4'-phosphopantetheinyl transferase superfamily
APY30_01020	PF09423	PhoD-like phosphatase
APY30_01020	PF16655	APY30_01020
APY30_01025	PF09423	PhoD-like phosphatase
APY30_01025	PF16655	APY30_01025
APY30_01030	PF02527	rRNA small subunit methyltransferase G
APY30_01035	PF05960	Bacterial protein of unknown function (DUF885)
APY30_01045	PF02321	Outer membrane efflux protein
APY30_01050	PF16576	APY30_01050
APY30_01060	PF00873	AcrB/AcrD/AcrF family
APY30_01065	PF00830	Ribosomal L28 family
APY30_01070	PF00471	Ribosomal protein L33
APY30_01075	PF04909	Amidohydrolase
APY30_01080	PF04303	PrpF protein
APY30_01085	PF03737	Demethylmenaquinone methyltransferase
APY30_01090	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
APY30_01090	PF03466	LysR substrate binding domain
APY30_01095	PF13091	PLD-like domain
APY30_01095	PF13396	APY30_01095
APY30_01105	PF13454	FAD-NAD(P)-binding
APY30_01110	PF00580	UvrD/REP helicase N-terminal domain
APY30_01110	PF13361	UvrD-like helicase C-terminal domain
APY30_01120	PF00132	Bacterial transferase hexapeptide (six repeats)
APY30_01120	PF12464	Maltose acetyltransferase
APY30_01125	PF00582	Universal stress protein family
APY30_01130	PF12833	Helix-turn-helix domain
APY30_01135	PF05591	APY30_01135
APY30_01140	PF05943	APY30_01140
APY30_01145	PF05638	Protein of unknown function (DUF796)
APY30_01150	PF07024	ImpE protein
APY30_01155	PF04965	Gene 25-like lysozyme
APY30_01160	PF05947	APY30_01160
APY30_01165	PF06996	APY30_01165
APY30_01170	PF00004	ATPase family associated with various cellular activities (AAA)
APY30_01170	PF07724	AAA domain (Cdc48 subfamily)
APY30_01170	PF10431	C-terminal, D2-small domain, of ClpB protein
APY30_01175	PF00665	Integrase core domain
APY30_01180	PF01527	Transposase
APY30_01190	PF01419	Jacalin-like lectin domain
APY30_01195	PF00328	Histidine phosphatase superfamily (branch 2)
APY30_01205	PF04773	FecR protein
APY30_01205	PF16220	APY30_01205
APY30_01205	PF16344	APY30_01205
APY30_01210	PF04542	Sigma-70 region 2
APY30_01210	PF08281	Sigma-70, region 4
APY30_01215	PF07638	ECF sigma factor
APY30_01220	PF00069	Protein kinase domain
APY30_01220	PF13424	Tetratricopeptide repeat
APY30_01225	PF05488	PAAR motif
APY30_01230	PF00515	Tetratricopeptide repeat
APY30_01230	PF13489	Methyltransferase domain
APY30_01235	PF05954	Phage late control gene D protein (GPD)
APY30_01245	PF00498	FHA domain
APY30_01250	PF05936	APY30_01250
APY30_01255	PF00691	OmpA family
APY30_01255	PF09850	Uncharacterized protein conserved in bacteria (DUF2077)
APY30_01265	PF09867	Uncharacterized protein conserved in bacteria (DUF2094)
APY30_01270	PF13672	Protein phosphatase 2C
APY30_01275	PF00069	Protein kinase domain
APY30_01275	PF03781	Sulfatase-modifying factor enzyme 1
APY30_01285	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
APY30_01285	PF08479	POTRA domain, ShlB-type
APY30_01290	PF05860	haemagglutination activity domain
APY30_01295	PF06812	APY30_01295
APY30_01300	PF11191	Protein of unknown function (DUF2782)
APY30_01305	PF00476	DNA polymerase family A
APY30_01305	PF01367	5'-3' exonuclease, C-terminal SAM fold
APY30_01305	PF01612	3'-5' exonuclease
APY30_01305	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
APY30_01315	PF01218	Coproporphyrinogen III oxidase
APY30_01330	PF00326	Prolyl oligopeptidase family
APY30_01330	PF00930	Dipeptidyl peptidase IV (DPP IV) N-terminal region
APY30_01335	PF00501	AMP-binding enzyme
APY30_01350	PF01494	FAD binding domain
APY30_01355	PF00550	Phosphopantetheine attachment site
APY30_01365	PF01553	Acyltransferase
APY30_01370	PF07977	FabA-like domain
APY30_01375	PF03279	APY30_01375
APY30_01395	PF03176	MMPL family
APY30_01410	PF13561	Enoyl-(Acyl carrier protein) reductase
APY30_01420	PF01494	FAD binding domain
APY30_01425	PF00535	Glycosyl transferase family 2
APY30_01430	PF13723	APY30_01430
APY30_01435	PF00109	Beta-ketoacyl synthase, N-terminal domain
APY30_01435	PF02801	Beta-ketoacyl synthase, C-terminal domain
APY30_01440	PF05166	YcgL domain
APY30_01445	PF00023	Ankyrin repeat
APY30_01445	PF12796	Ankyrin repeats (3 copies)
APY30_01455	PF00723	Glycosyl hydrolases family 15
APY30_01460	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
APY30_01460	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
APY30_01465	PF00999	Sodium/hydrogen exchanger family
APY30_01465	PF02254	TrkA-N domain
APY30_01470	PF00194	Eukaryotic-type carbonic anhydrase
APY30_01475	PF00571	CBS domain
APY30_01475	PF01769	Divalent cation transporter
APY30_01475	PF03448	MgtE intracellular N domain
APY30_01480	PF13302	Acetyltransferase (GNAT) domain
APY30_01480	PF13380	CoA binding domain
APY30_01480	PF13549	ATP-grasp domain
APY30_01480	PF13607	Succinyl-CoA ligase like flavodoxin domain
APY30_01485	PF04332	APY30_01485
APY30_01490	PF00317	Ribonucleotide reductase, all-alpha domain
APY30_01490	PF02867	Ribonucleotide reductase, barrel domain
APY30_01495	PF00268	Ribonucleotide reductase, small chain
APY30_01500	PF00258	Flavodoxin
APY30_01505	PF00085	Thioredoxin
APY30_01515	PF03061	Thioesterase superfamily
APY30_01525	PF02558	Ketopantoate reductase PanE/ApbA
APY30_01525	PF08546	Ketopantoate reductase PanE/ApbA C terminal
APY30_01535	PF01061	APY30_01535
APY30_01540	PF00005	ABC transporter
APY30_01545	PF00175	Oxidoreductase NAD-binding domain
APY30_01545	PF00970	Oxidoreductase FAD-binding domain
APY30_01550	PF01965	DJ-1/PfpI family
APY30_01550	PF12833	Helix-turn-helix domain
APY30_01555	PF11287	APY30_01555
APY30_01560	PF00593	TonB dependent receptor
APY30_01560	PF07715	TonB-dependent Receptor Plug Domain
APY30_01570	PF01545	Cation efflux family
APY30_01575	PF02583	Metal-sensitive transcriptional repressor
APY30_01580	PF01229	Glycosyl hydrolases family 39
APY30_01590	PF01381	Helix-turn-helix
APY30_01595	PF08386	TAP-like protein
APY30_01600	PF00005	ABC transporter
APY30_01605	PF12679	APY30_01605
APY30_01610	PF03544	Gram-negative bacterial TonB protein C-terminal
APY30_01615	PF04820	Tryptophan halogenase
APY30_01620	PF13621	Cupin-like domain
APY30_01625	PF07277	APY30_01625
APY30_01630	PF00593	TonB dependent receptor
APY30_01630	PF07715	TonB-dependent Receptor Plug Domain
APY30_01640	PF00043	Glutathione S-transferase, C-terminal domain
APY30_01640	PF02798	Glutathione S-transferase, N-terminal domain
APY30_01645	PF00326	Prolyl oligopeptidase family
APY30_01645	PF00930	Dipeptidyl peptidase IV (DPP IV) N-terminal region
APY30_01655	PF01527	Transposase
APY30_01660	PF00665	Integrase core domain
APY30_01685	PF00490	Delta-aminolevulinic acid dehydratase
APY30_01695	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
APY30_01695	PF03466	LysR substrate binding domain
APY30_01700	PF01223	DNA/RNA non-specific endonuclease
APY30_01705	PF00175	Oxidoreductase NAD-binding domain
APY30_01705	PF00258	Flavodoxin
APY30_01705	PF03929	APY30_01705
APY30_01710	PF07676	WD40-like Beta Propeller Repeat
APY30_01715	PF01488	Shikimate / quinate 5-dehydrogenase
APY30_01715	PF08501	Shikimate dehydrogenase substrate binding domain
APY30_01730	PF13307	Helicase C-terminal domain
APY30_01735	PF00199	Catalase
APY30_01735	PF06628	Catalase-related immune-responsive
APY30_01740	PF12796	Ankyrin repeats (3 copies)
APY30_01750	PF01207	Dihydrouridine synthase (Dus)
APY30_01760	PF00072	Response regulator receiver domain
APY30_01760	PF00486	Transcriptional regulatory protein, C terminal
APY30_01765	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_01770	PF08811	APY30_01770
APY30_01775	PF07394	APY30_01775
APY30_01780	PF06167	Glucose-regulated metallo-peptidase M90
APY30_01790	PF02237	Biotin protein ligase C terminal domain
APY30_01790	PF03099	Biotin/lipoate A/B protein ligase family
APY30_01790	PF08279	HTH domain
APY30_01795	PF03309	Type III pantothenate kinase
APY30_01800	PF05036	Sporulation related domain
APY30_01815	PF00665	Integrase core domain
APY30_01820	PF01527	Transposase
APY30_01825	PF13356	Domain of unknown function (DUF4102)
APY30_01830	PF02223	Thymidylate kinase
APY30_01850	PF03259	Roadblock/LC7 domain
APY30_01855	PF00491	Arginase family
APY30_01860	PF08085	APY30_01860
APY30_01865	PF08085	APY30_01865
APY30_01870	PF05532	CsbD-like
APY30_01875	PF00579	tRNA synthetases class I (W and Y)
APY30_01880	PF00753	Metallo-beta-lactamase superfamily
APY30_01885	PF02225	PA domain
APY30_01885	PF04389	Peptidase family M28
APY30_01895	PF00892	EamA-like transporter family
APY30_01900	PF00892	EamA-like transporter family
APY30_01905	PF12697	Alpha/beta hydrolase family
APY30_01910	PF02687	APY30_01910
APY30_01910	PF12704	MacB-like periplasmic core domain
APY30_01915	PF02687	APY30_01915
APY30_01915	PF12704	MacB-like periplasmic core domain
APY30_01920	PF00005	ABC transporter
APY30_01925	PF16576	APY30_01925
APY30_01930	PF07730	Histidine kinase
APY30_01935	PF00072	Response regulator receiver domain
APY30_01935	PF00196	Bacterial regulatory proteins, luxR family
APY30_01940	PF06283	Trehalose utilisation
APY30_01945	PF01292	Prokaryotic cytochrome b561
APY30_01950	PF00199	Catalase
APY30_01955	PF04542	Sigma-70 region 2
APY30_01955	PF08281	Sigma-70, region 4
APY30_01965	PF00883	Cytosol aminopeptidase family, catalytic domain
APY30_01970	PF13419	Haloacid dehalogenase-like hydrolase
APY30_01975	PF01594	APY30_01975
APY30_01995	PF13180	PDZ domain
APY30_01995	PF13365	Trypsin-like peptidase domain
APY30_02005	PF11769	APY30_02005
APY30_02015	PF00512	His Kinase A (phospho-acceptor) domain
APY30_02015	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_02020	PF00072	Response regulator receiver domain
APY30_02020	PF00486	Transcriptional regulatory protein, C terminal
APY30_02025	PF01370	NAD dependent epimerase/dehydratase family
APY30_02025	PF08338	Domain of unknown function (DUF1731)
APY30_02030	PF13628	APY30_02030
APY30_02050	PF11379	APY30_02050
APY30_02055	PF00326	Prolyl oligopeptidase family
APY30_02065	PF01139	tRNA-splicing ligase RtcB
APY30_02070	PF01145	SPFH domain / Band 7 family
APY30_02085	PF00440	Bacterial regulatory proteins, tetR family
APY30_02090	PF00111	2Fe-2S iron-sulfur cluster binding domain
APY30_02090	PF00175	Oxidoreductase NAD-binding domain
APY30_02090	PF00970	Oxidoreductase FAD-binding domain
APY30_02095	PF00487	APY30_02095
APY30_02100	PF00563	EAL domain
APY30_02100	PF12792	APY30_02100
APY30_02110	PF08212	Lipocalin-like domain
APY30_02115	PF01078	Magnesium chelatase, subunit ChlI
APY30_02115	PF13335	APY30_02115
APY30_02115	PF13541	Subunit ChlI of Mg-chelatase
APY30_02120	PF04380	APY30_02120
APY30_02125	PF00543	Nitrogen regulatory protein P-II
APY30_02130	PF02838	Glycosyl hydrolase family 20, domain 2
APY30_02130	PF07555	beta-N-acetylglucosaminidase
APY30_02135	PF01636	Phosphotransferase enzyme family
APY30_02150	PF09851	APY30_02150
APY30_02150	PF14470	Bacterial PH domain
APY30_02155	PF01564	Spermine/spermidine synthase
APY30_02155	PF17284	APY30_02155
APY30_02160	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
APY30_02165	PF00501	AMP-binding enzyme
APY30_02165	PF00550	Phosphopantetheine attachment site
APY30_02165	PF00668	Condensation domain
APY30_02165	PF00975	Thioesterase domain
APY30_02165	PF13193	AMP-binding enzyme C-terminal domain
APY30_02170	PF03033	Glycosyltransferase family 28 N-terminal domain
APY30_02180	PF00106	short chain dehydrogenase
APY30_02190	PF05036	Sporulation related domain
APY30_02195	PF00750	tRNA synthetases class I (R)
APY30_02195	PF03485	Arginyl tRNA synthetase N terminal domain
APY30_02195	PF05746	DALR anticodon binding domain
APY30_02200	PF04002	RadC-like JAB domain
APY30_02205	PF02441	Flavoprotein
APY30_02205	PF04127	DNA / pantothenate metabolism flavoprotein
APY30_02210	PF00692	dUTPase
APY30_02215	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
APY30_02215	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
APY30_02215	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
APY30_02215	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
APY30_02225	PF07578	Lipid A Biosynthesis N-terminal domain
APY30_02230	PF00535	Glycosyl transferase family 2
APY30_02235	PF01370	NAD dependent epimerase/dehydratase family
APY30_02245	PF02195	ParB-like nuclease domain
APY30_02250	PF13614	AAA domain
APY30_02260	PF00156	Phosphoribosyl transferase domain
APY30_02265	PF03372	Endonuclease/Exonuclease/phosphatase family
APY30_02270	PF07690	Major Facilitator Superfamily
APY30_02280	PF03702	Uncharacterised protein family (UPF0075)
APY30_02285	PF01551	Peptidase family M23
APY30_02285	PF04225	Opacity-associated protein A LysM-like domain
APY30_02290	PF00579	tRNA synthetases class I (W and Y)
APY30_02325	PF00171	Aldehyde dehydrogenase family
APY30_02325	PF01619	Proline dehydrogenase
APY30_02325	PF14850	DNA-binding domain of Proline dehydrogenase
APY30_02330	PF10003	APY30_02330
APY30_02335	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
APY30_02335	PF02790	Cytochrome C oxidase subunit II, transmembrane domain
APY30_02340	PF00115	Cytochrome C and Quinol oxidase polypeptide I
APY30_02345	PF04442	Cytochrome c oxidase assembly protein CtaG/Cox11
APY30_02350	PF00510	Cytochrome c oxidase subunit III
APY30_02355	PF11137	APY30_02355
APY30_02360	PF02104	APY30_02360
APY30_02370	PF02628	APY30_02370
APY30_02375	PF01040	UbiA prenyltransferase family
APY30_02380	PF13899	Thioredoxin-like
APY30_02385	PF13593	SBF-like CPA transporter family (DUF4137)
APY30_02390	PF01807	CHC2 zinc finger
APY30_02390	PF08275	DNA primase catalytic core, N-terminal domain
APY30_02390	PF08278	DNA primase DnaG DnaB-binding
APY30_02390	PF10410	DnaB-helicase binding domain of primase
APY30_02390	PF13155	Toprim-like
APY30_02395	PF03631	APY30_02395
APY30_02400	PF09424	Yqey-like protein
APY30_02405	PF01165	Ribosomal protein S21
APY30_02410	PF00814	Glycoprotease family
APY30_02415	PF02152	Dihydroneopterin aldolase
APY30_02420	PF00933	Glycosyl hydrolase family 3 N terminal domain
APY30_02420	PF01915	Glycosyl hydrolase family 3 C-terminal domain
APY30_02420	PF14310	Fibronectin type III-like domain
APY30_02425	PF07995	Glucose / Sorbosone dehydrogenase
APY30_02430	PF05360	APY30_02430
APY30_02445	PF13520	Amino acid permease
APY30_02455	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
APY30_02455	PF13378	Enolase C-terminal domain-like
APY30_02460	PF00877	NlpC/P60 family
APY30_02460	PF12913	SH3 domain of the SH3b1 type
APY30_02460	PF12914	SH3 domain of SH3b2 type
APY30_02465	PF01510	N-acetylmuramoyl-L-alanine amidase
APY30_02470	PF01427	D-ala-D-ala dipeptidase
APY30_02475	PF14255	APY30_02475
APY30_02485	PF13202	EF hand
APY30_02490	PF13202	EF hand
APY30_02495	PF13419	Haloacid dehalogenase-like hydrolase
APY30_02510	PF07063	Domain of unknown function (DUF1338)
APY30_02515	PF00873	AcrB/AcrD/AcrF family
APY30_02520	PF00873	AcrB/AcrD/AcrF family
APY30_02525	PF16576	APY30_02525
APY30_02530	PF01546	Peptidase family M20/M25/M40
APY30_02530	PF07687	Peptidase dimerisation domain
APY30_02535	PF14489	QueF-like protein
APY30_02535	PF14819	Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term
APY30_02540	PF01476	LysM domain
APY30_02550	PF03971	Monomeric isocitrate dehydrogenase
APY30_02560	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
APY30_02560	PF03466	LysR substrate binding domain
APY30_02565	PF06315	Isocitrate dehydrogenase kinase/phosphatase (AceK)
APY30_02575	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
APY30_02575	PF07497	Rho termination factor, RNA-binding domain
APY30_02575	PF07498	Rho termination factor, N-terminal domain
APY30_02580	PF00085	Thioredoxin
APY30_02585	PF00270	DEAD/DEAH box helicase
APY30_02585	PF00271	Helicase conserved C-terminal domain
APY30_02585	PF12300	APY30_02585
APY30_02590	PF00005	ABC transporter
APY30_02600	PF00072	Response regulator receiver domain
APY30_02605	PF03167	Uracil DNA glycosylase superfamily
APY30_02610	PF00140	Sigma-70 factor, region 1
APY30_02610	PF04542	Sigma-70 region 2
APY30_02610	PF04545	Sigma-70, region 4
APY30_02615	PF03458	APY30_02615
APY30_02620	PF07992	Pyridine nucleotide-disulphide oxidoreductase
APY30_02630	PF01936	NYN domain
APY30_02630	PF12872	OST-HTH/LOTUS domain
APY30_02635	PF00043	Glutathione S-transferase, C-terminal domain
APY30_02635	PF13417	Glutathione S-transferase, N-terminal domain
APY30_02640	PF00270	DEAD/DEAH box helicase
APY30_02640	PF00271	Helicase conserved C-terminal domain
APY30_02650	PF11304	APY30_02650
APY30_02655	PF12412	APY30_02655
APY30_02660	PF01554	MatE
APY30_02665	PF01343	Peptidase family S49
APY30_02675	PF13561	Enoyl-(Acyl carrier protein) reductase
APY30_02690	PF01300	Telomere recombination
APY30_02695	PF01131	DNA topoisomerase
APY30_02695	PF01751	Toprim domain
APY30_02695	PF13368	APY30_02695
APY30_02700	PF06271	APY30_02700
APY30_02700	PF14237	APY30_02700
APY30_02705	PF00114	Pilin (bacterial filament)
APY30_02705	PF14237	APY30_02705
APY30_02710	PF04361	APY30_02710
APY30_02715	PF02481	DNA recombination-mediator protein A
APY30_02720	PF01476	LysM domain
APY30_02725	PF01327	Polypeptide deformylase
APY30_02730	PF00551	Formyl transferase
APY30_02730	PF02911	Formyl transferase, C-terminal domain
APY30_02735	PF01029	NusB family
APY30_02735	PF01189	NOL1/NOP2/sun family
APY30_02740	PF13231	APY30_02740
APY30_02745	PF04932	APY30_02745
APY30_02750	PF00535	Glycosyl transferase family 2
APY30_02755	PF02350	UDP-N-acetylglucosamine 2-epimerase
APY30_02760	PF03703	APY30_02760
APY30_02765	PF03703	APY30_02765
APY30_02770	PF00925	GTP cyclohydrolase II
APY30_02780	PF13420	Acetyltransferase (GNAT) domain
APY30_02785	PF03279	APY30_02785
APY30_02790	PF02580	D-Tyr-tRNA(Tyr) deacylase
APY30_02795	PF00140	Sigma-70 factor, region 1
APY30_02795	PF03979	Sigma-70 factor, region 1
APY30_02795	PF04539	Sigma-70 region 3
APY30_02795	PF04542	Sigma-70 region 2
APY30_02795	PF04545	Sigma-70, region 4
APY30_02795	PF04546	Sigma-70, non-essential region
APY30_02810	PF00589	Phage integrase family
APY30_02810	PF13356	Domain of unknown function (DUF4102)
APY30_02815	PF12728	Helix-turn-helix domain
APY30_02830	PF04326	Divergent AAA domain
APY30_02830	PF13749	ATP-dependent DNA helicase recG C-terminal
APY30_02835	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_02840	PF01555	DNA methylase
APY30_02845	PF00176	SNF2 family N-terminal domain
APY30_02845	PF00271	Helicase conserved C-terminal domain
APY30_02850	PF08665	APY30_02850
APY30_02860	PF01527	Transposase
APY30_02865	PF00665	Integrase core domain
APY30_02870	PF11903	APY30_02870
APY30_02875	PF00557	Metallopeptidase family M24
APY30_02905	PF07866	Protein of unknown function (DUF1653)
APY30_02915	PF03795	YCII-related domain
APY30_02920	PF02525	Flavodoxin-like fold
APY30_02925	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
APY30_02925	PF03466	LysR substrate binding domain
APY30_02930	PF12697	Alpha/beta hydrolase family
APY30_02940	PF00246	Zinc carboxypeptidase
APY30_02945	PF00005	ABC transporter
APY30_02950	PF12040	APY30_02950
APY30_02950	PF12679	APY30_02950
APY30_02955	PF12040	APY30_02955
APY30_02960	PF00593	TonB dependent receptor
APY30_02960	PF07715	TonB-dependent Receptor Plug Domain
APY30_02965	PF11445	APY30_02965
APY30_02970	PF00691	OmpA family
APY30_02975	PF05650	APY30_02975
APY30_02980	PF11828	APY30_02980
APY30_02995	PF03692	APY30_02995
APY30_03005	PF00107	Zinc-binding dehydrogenase
APY30_03005	PF08240	Alcohol dehydrogenase GroES-like domain
APY30_03005	PF13823	Alcohol dehydrogenase GroES-associated
APY30_03010	PF13628	APY30_03010
APY30_03015	PF12244	APY30_03015
APY30_03020	PF00005	ABC transporter
APY30_03020	PF00664	ABC transporter transmembrane region
APY30_03030	PF03275	UDP-galactopyranose mutase
APY30_03030	PF13450	NAD(P)-binding Rossmann-like domain
APY30_03035	PF13692	Glycosyl transferases group 1
APY30_03040	PF16363	APY30_03040
APY30_03045	PF13561	Enoyl-(Acyl carrier protein) reductase
APY30_03060	PF02322	APY30_03060
APY30_03065	PF01654	APY30_03065
APY30_03075	PF00072	Response regulator receiver domain
APY30_03075	PF00158	Sigma-54 interaction domain
APY30_03075	PF02954	Bacterial regulatory protein, Fis family
APY30_03085	PF00072	Response regulator receiver domain
APY30_03110	PF05067	Manganese containing catalase
APY30_03115	PF05974	Domain of unknown function (DUF892)
APY30_03125	PF01527	Transposase
APY30_03130	PF00665	Integrase core domain
APY30_03130	PF13276	APY30_03130
APY30_03135	PF01266	FAD dependent oxidoreductase
APY30_03140	PF06580	APY30_03140
APY30_03145	PF00072	Response regulator receiver domain
APY30_03145	PF04397	LytTr DNA-binding domain
APY30_03155	PF13520	Amino acid permease
APY30_03170	PF09995	APY30_03170
APY30_03175	PF01431	Peptidase family M13
APY30_03175	PF05649	Peptidase family M13
APY30_03180	PF00535	Glycosyl transferase family 2
APY30_03185	PF00248	Aldo/keto reductase family
APY30_03190	PF03358	NADPH-dependent FMN reductase
APY30_03195	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
APY30_03195	PF03466	LysR substrate binding domain
APY30_03200	PF07681	APY30_03200
APY30_03205	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
APY30_03210	PF04055	Radical SAM superfamily
APY30_03215	PF03167	Uracil DNA glycosylase superfamily
APY30_03215	PF13566	APY30_03215
APY30_03220	PF02469	Fasciclin domain
APY30_03225	PF00999	Sodium/hydrogen exchanger family
APY30_03230	PF00005	ABC transporter
APY30_03235	PF01061	APY30_03235
APY30_03240	PF11730	APY30_03240
APY30_03250	PF13223	APY30_03250
APY30_03260	PF00691	OmpA family
APY30_03260	PF13677	APY30_03260
APY30_03265	PF01618	APY30_03265
APY30_03270	PF09864	Membrane-bound lysozyme-inhibitor of c-type lysozyme
APY30_03275	PF01641	SelR domain
APY30_03285	PF01037	AsnC family
APY30_03285	PF13404	AsnC-type helix-turn-helix domain
APY30_03290	PF01266	FAD dependent oxidoreductase
APY30_03295	PF00842	Alanine racemase, C-terminal domain
APY30_03295	PF01168	Alanine racemase, N-terminal domain
APY30_03300	PF11454	APY30_03300
APY30_03315	PF00072	Response regulator receiver domain
APY30_03315	PF00512	His Kinase A (phospho-acceptor) domain
APY30_03315	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_03315	PF08448	PAS fold
APY30_03315	PF13426	PAS domain
APY30_03320	PF11607	Protein of unknown function (DUF3247)
APY30_03325	PF07995	Glucose / Sorbosone dehydrogenase
APY30_03335	PF05175	Methyltransferase small domain
APY30_03340	PF00849	RNA pseudouridylate synthase
APY30_03345	PF13419	Haloacid dehalogenase-like hydrolase
APY30_03350	PF13561	Enoyl-(Acyl carrier protein) reductase
APY30_03360	PF07209	APY30_03360
APY30_03365	PF12146	Putative lysophospholipase
APY30_03370	PF00072	Response regulator receiver domain
APY30_03370	PF00512	His Kinase A (phospho-acceptor) domain
APY30_03370	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_03380	PF04461	Protein of unknown function (DUF520)
APY30_03385	PF00892	EamA-like transporter family
APY30_03390	PF00005	ABC transporter
APY30_03390	PF09383	NIL domain
APY30_03395	PF00528	Binding-protein-dependent transport system inner membrane component
APY30_03400	PF03180	NLPA lipoprotein
APY30_03410	PF01527	Transposase
APY30_03415	PF00665	Integrase core domain
APY30_03430	PF03922	OmpW family
APY30_03435	PF03167	Uracil DNA glycosylase superfamily
APY30_03440	PF11101	APY30_03440
APY30_03445	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
APY30_03445	PF00364	Biotin-requiring enzyme
APY30_03445	PF02817	e3 binding domain
APY30_03455	PF00364	Biotin-requiring enzyme
APY30_03455	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
APY30_03455	PF07992	Pyridine nucleotide-disulphide oxidoreductase
APY30_03475	PF00119	ATP synthase A chain
APY30_03480	PF00137	ATP synthase subunit C
APY30_03485	PF00430	ATP synthase B/B' CF(0)
APY30_03490	PF00213	ATP synthase delta (OSCP) subunit
APY30_03495	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
APY30_03495	PF00306	ATP synthase alpha/beta chain, C terminal domain
APY30_03495	PF02874	ATP synthase alpha/beta family, beta-barrel domain
APY30_03500	PF00231	ATP synthase
APY30_03505	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
APY30_03505	PF02874	ATP synthase alpha/beta family, beta-barrel domain
APY30_03510	PF00401	ATP synthase, Delta/Epsilon chain, long alpha-helix domain
APY30_03510	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
APY30_03515	PF01817	Chorismate mutase type II
APY30_03520	PF04138	APY30_03520
APY30_03525	PF00132	Bacterial transferase hexapeptide (six repeats)
APY30_03525	PF12804	MobA-like NTP transferase domain
APY30_03525	PF14602	Hexapeptide repeat of succinyl-transferase
APY30_03530	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_03535	PF00072	Response regulator receiver domain
APY30_03535	PF00158	Sigma-54 interaction domain
APY30_03535	PF02954	Bacterial regulatory protein, Fis family
APY30_03545	PF02687	APY30_03545
APY30_03545	PF12704	MacB-like periplasmic core domain
APY30_03550	PF02687	APY30_03550
APY30_03550	PF12704	MacB-like periplasmic core domain
APY30_03555	PF00005	ABC transporter
APY30_03560	PF13437	HlyD family secretion protein
APY30_03560	PF13533	Biotin-lipoyl like
APY30_03565	PF01380	SIS domain
APY30_03565	PF13522	Glutamine amidotransferase domain
APY30_03580	PF01471	Putative peptidoglycan binding domain
APY30_03590	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
APY30_03595	PF05275	APY30_03595
APY30_03600	PF00394	Multicopper oxidase
APY30_03600	PF07731	Multicopper oxidase
APY30_03600	PF07732	Multicopper oxidase
APY30_03610	PF00291	Pyridoxal-phosphate dependent enzyme
APY30_03615	PF01432	Peptidase family M3
APY30_03625	PF00109	Beta-ketoacyl synthase, N-terminal domain
APY30_03625	PF02801	Beta-ketoacyl synthase, C-terminal domain
APY30_03630	PF07977	FabA-like domain
APY30_03635	PF00817	impB/mucB/samB family
APY30_03635	PF11799	impB/mucB/samB family C-terminal domain
APY30_03640	PF13419	Haloacid dehalogenase-like hydrolase
APY30_03645	PF00593	TonB dependent receptor
APY30_03645	PF07715	TonB-dependent Receptor Plug Domain
APY30_03650	PF00756	Putative esterase
APY30_03655	PF04994	TfoX C-terminal domain
APY30_03660	PF13185	GAF domain
APY30_03665	PF13500	AAA domain
APY30_03670	PF09361	APY30_03670
APY30_03675	PF01242	6-pyruvoyl tetrahydropterin synthase
APY30_03680	PF00593	TonB dependent receptor
APY30_03680	PF07715	TonB-dependent Receptor Plug Domain
APY30_03685	PF02225	PA domain
APY30_03685	PF04253	Transferrin receptor-like dimerisation domain
APY30_03685	PF04389	Peptidase family M28
APY30_03690	PF00270	DEAD/DEAH box helicase
APY30_03690	PF00271	Helicase conserved C-terminal domain
APY30_03695	PF01557	Fumarylacetoacetate (FAA) hydrolase family
APY30_03700	PF13417	Glutathione S-transferase, N-terminal domain
APY30_03705	PF00437	Type II/IV secretion system protein
APY30_03710	PF14346	Domain of unknown function (DUF4398)
APY30_03720	PF04325	Protein of unknown function (DUF465)
APY30_03725	PF00291	Pyridoxal-phosphate dependent enzyme
APY30_03725	PF00571	CBS domain
APY30_03730	PF01053	Cys/Met metabolism PLP-dependent enzyme
APY30_03740	PF00534	Glycosyl transferases group 1
APY30_03740	PF13439	Glycosyltransferase Family 4
APY30_03745	PF01061	APY30_03745
APY30_03750	PF00005	ABC transporter
APY30_03750	PF14524	Wzt C-terminal domain
APY30_03755	PF01636	Phosphotransferase enzyme family
APY30_03755	PF13847	Methyltransferase domain
APY30_03760	PF00534	Glycosyl transferases group 1
APY30_03760	PF13579	Glycosyl transferase 4-like domain
APY30_03765	PF16363	APY30_03765
APY30_03770	PF01370	NAD dependent epimerase/dehydratase family
APY30_03775	PF01527	Transposase
APY30_03780	PF00665	Integrase core domain
APY30_03790	PF12760	Transposase zinc-ribbon domain
APY30_03790	PF12762	APY30_03790
APY30_03800	PF01593	Flavin containing amine oxidoreductase
APY30_03805	PF04138	APY30_03805
APY30_03810	PF00535	Glycosyl transferase family 2
APY30_03820	PF00766	Electron transfer flavoprotein FAD-binding domain
APY30_03820	PF01012	Electron transfer flavoprotein domain
APY30_03825	PF01012	Electron transfer flavoprotein domain
APY30_03830	PF16363	APY30_03830
APY30_03835	PF00483	Nucleotidyl transferase
APY30_03840	PF00908	dTDP-4-dehydrorhamnose 3,5-epimerase
APY30_03845	PF04321	RmlD substrate binding domain
APY30_03850	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
APY30_03850	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
APY30_03850	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
APY30_03855	PF00483	Nucleotidyl transferase
APY30_03855	PF01050	Mannose-6-phosphate isomerase
APY30_03860	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
APY30_03860	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
APY30_03860	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
APY30_03860	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
APY30_03865	PF01144	Coenzyme A transferase
APY30_03870	PF01144	Coenzyme A transferase
APY30_03875	PF01946	Thi4 family
APY30_03875	PF05187	Electron transfer flavoprotein-ubiquinone oxidoreductase
APY30_03880	PF13532	2OG-Fe(II) oxygenase superfamily
APY30_03885	PF03886	Protein of unknown function (DUF330)
APY30_03890	PF02470	APY30_03890
APY30_03895	PF00005	ABC transporter
APY30_03900	PF02405	APY30_03900
APY30_03905	PF06738	APY30_03905
APY30_03905	PF12821	APY30_03905
APY30_03910	PF00816	H-NS histone family
APY30_03915	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
APY30_03915	PF03129	Anticodon binding domain
APY30_03915	PF04073	Aminoacyl-tRNA editing domain
APY30_03920	PF13511	APY30_03920
APY30_03925	PF01066	CDP-alcohol phosphatidyltransferase
APY30_03935	PF00583	Acetyltransferase (GNAT) family
APY30_03940	PF00544	Pectate lyase
APY30_03945	PF01464	Transglycosylase SLT domain
APY30_03945	PF14718	Soluble lytic murein transglycosylase L domain
APY30_03955	PF00133	tRNA synthetases class I (I, L, M and V)
APY30_03955	PF08264	Anticodon-binding domain of tRNA
APY30_03955	PF10458	Valyl tRNA synthetase tRNA binding arm
APY30_03960	PF04364	DNA polymerase III chi subunit, HolC
APY30_03970	PF00883	Cytosol aminopeptidase family, catalytic domain
APY30_03970	PF02789	Cytosol aminopeptidase family, N-terminal domain
APY30_03975	PF03739	APY30_03975
APY30_03980	PF03739	APY30_03980
APY30_03990	PF06271	APY30_03990
APY30_03995	PF00589	Phage integrase family
APY30_03995	PF02899	Phage integrase, N-terminal SAM-like domain
APY30_04000	PF10411	Disulfide bond isomerase protein N-terminus
APY30_04000	PF13098	Thioredoxin-like domain
APY30_04005	PF02769	AIR synthase related protein, C-terminal domain
APY30_04005	PF13507	CobB/CobQ-like glutamine amidotransferase domain
APY30_04010	PF03895	YadA-like C-terminal region
APY30_04010	PF05658	Head domain of trimeric autotransporter adhesin
APY30_04010	PF05662	Coiled stalk of trimeric autotransporter adhesin
APY30_04015	PF00082	Subtilase family
APY30_04015	PF04151	Bacterial pre-peptidase C-terminal domain
APY30_04020	PF05658	Head domain of trimeric autotransporter adhesin
APY30_04020	PF05662	Coiled stalk of trimeric autotransporter adhesin
APY30_04020	PF13018	APY30_04020
APY30_04025	PF00082	Subtilase family
APY30_04025	PF04151	Bacterial pre-peptidase C-terminal domain
APY30_04030	PF00437	Type II/IV secretion system protein
APY30_04030	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
APY30_04035	PF00482	Type II secretion system (T2SS), protein F
APY30_04040	PF08334	Type II secretion system (T2SS), protein G
APY30_04045	PF12019	Type II transport protein GspH
APY30_04050	PF07963	Prokaryotic N-terminal methylation motif
APY30_04060	PF03934	Type II secretion system (T2SS), protein K
APY30_04065	PF05137	APY30_04065
APY30_04070	PF10741	APY30_04070
APY30_04080	PF00263	APY30_04080
APY30_04080	PF03958	Bacterial type II/III secretion system short domain
APY30_04085	PF01527	Transposase
APY30_04090	PF13276	APY30_04090
APY30_04090	PF13683	APY30_04090
APY30_04100	PF00392	Bacterial regulatory proteins, gntR family
APY30_04100	PF07702	UTRA domain
APY30_04105	PF04973	APY30_04105
APY30_04110	PF00593	TonB dependent receptor
APY30_04110	PF07715	TonB-dependent Receptor Plug Domain
APY30_04115	PF01636	Phosphotransferase enzyme family
APY30_04120	PF00535	Glycosyl transferase family 2
APY30_04130	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
APY30_04130	PF13641	Glycosyltransferase like family 2
APY30_04150	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
APY30_04165	PF00535	Glycosyl transferase family 2
APY30_04165	PF03552	Cellulose synthase
APY30_04165	PF07238	PilZ domain
APY30_04170	PF03170	Bacterial cellulose synthase subunit
APY30_04175	PF01270	Glycosyl hydrolases family 8
APY30_04180	PF05420	APY30_04180
APY30_04180	PF13432	Tetratricopeptide repeat
APY30_04180	PF14559	Tetratricopeptide repeat
APY30_04200	PF03960	ArsC family
APY30_04205	PF01327	Polypeptide deformylase
APY30_04210	PF02645	Uncharacterised protein, DegV family COG1307
APY30_04230	PF01979	Amidohydrolase family
APY30_04235	PF01979	Amidohydrolase family
APY30_04240	PF06041	Bacterial protein of unknown function (DUF924)
APY30_04250	PF00462	Glutaredoxin
APY30_04250	PF00581	Rhodanese-like domain
APY30_04255	PF01522	Polysaccharide deacetylase
APY30_04260	PF00593	TonB dependent receptor
APY30_04260	PF07715	TonB-dependent Receptor Plug Domain
APY30_04265	PF08242	Methyltransferase domain
APY30_04270	PF13472	GDSL-like Lipase/Acylhydrolase family
APY30_04275	PF00155	Aminotransferase class I and II
APY30_04280	PF00005	ABC transporter
APY30_04280	PF00664	ABC transporter transmembrane region
APY30_04280	PF03412	Peptidase C39 family
APY30_04285	PF13437	HlyD family secretion protein
APY30_04285	PF13533	Biotin-lipoyl like
APY30_04295	PF10512	Cell division cycle-associated protein 8
APY30_04300	PF13276	APY30_04300
APY30_04300	PF13683	APY30_04300
APY30_04305	PF01527	Transposase
APY30_04310	PF01527	Transposase
APY30_04315	PF00665	Integrase core domain
APY30_04325	PF13683	APY30_04325
APY30_04330	PF01527	Transposase
APY30_04345	PF12802	MarR family
APY30_04350	PF13202	EF hand
APY30_04360	PF08450	SMP-30/Gluconolaconase/LRE-like region
APY30_04365	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
APY30_04375	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
APY30_04405	PF00749	tRNA synthetases class I (E and Q), catalytic domain
APY30_04405	PF03950	tRNA synthetases class I (E and Q), anti-codon binding domain
APY30_04410	PF13409	Glutathione S-transferase, N-terminal domain
APY30_04415	PF09413	Domain of unknown function (DUF2007)
APY30_04420	PF00072	Response regulator receiver domain
APY30_04425	PF00072	Response regulator receiver domain
APY30_04425	PF00512	His Kinase A (phospho-acceptor) domain
APY30_04425	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_04425	PF05227	CHASE3 domain
APY30_04430	PF00196	Bacterial regulatory proteins, luxR family
APY30_04435	PF08332	Calcium/calmodulin dependent protein kinase II Association
APY30_04440	PF01625	Peptide methionine sulfoxide reductase
APY30_04445	PF01965	DJ-1/PfpI family
APY30_04450	PF00923	Transaldolase
APY30_04455	PF01272	Transcription elongation factor, GreA/GreB, C-term
APY30_04455	PF14760	Rnk N-terminus
APY30_04460	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
APY30_04460	PF03466	LysR substrate binding domain
APY30_04465	PF07992	Pyridine nucleotide-disulphide oxidoreductase
APY30_04465	PF13192	Thioredoxin domain
APY30_04470	PF00578	AhpC/TSA family
APY30_04470	PF10417	C-terminal domain of 1-Cys peroxiredoxin
APY30_04475	PF05175	Methyltransferase small domain
APY30_04480	PF00561	alpha/beta hydrolase fold
APY30_04485	PF05013	N-formylglutamate amidohydrolase
APY30_04490	PF00293	NUDIX domain
APY30_04495	PF01367	5'-3' exonuclease, C-terminal SAM fold
APY30_04495	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
APY30_04500	PF00881	Nitroreductase family
APY30_04505	PF07793	APY30_04505
APY30_04510	PF07793	APY30_04510
APY30_04515	PF12146	Putative lysophospholipase
APY30_04520	PF00440	Bacterial regulatory proteins, tetR family
APY30_04520	PF13305	WHG domain
APY30_04525	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
APY30_04525	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
APY30_04530	PF11304	APY30_04530
APY30_04540	PF04542	Sigma-70 region 2
APY30_04540	PF08281	Sigma-70, region 4
APY30_04545	PF12769	Domain of unknown function (DUF3814)
APY30_04550	PF02233	NAD(P) transhydrogenase beta subunit
APY30_04560	PF01883	Domain of unknown function DUF59
APY30_04565	PF01063	Aminotransferase class IV
APY30_04580	PF00082	Subtilase family
APY30_04580	PF04151	Bacterial pre-peptidase C-terminal domain
APY30_04585	PF04073	Aminoacyl-tRNA editing domain
APY30_04590	PF00710	Asparaginase
APY30_04595	PF02055	O-Glycosyl hydrolase family 30
APY30_04595	PF17189	APY30_04595
APY30_04600	PF09842	APY30_04600
APY30_04605	PF03358	NADPH-dependent FMN reductase
APY30_04610	PF03631	APY30_04610
APY30_04615	PF00578	AhpC/TSA family
APY30_04620	PF00708	Acylphosphatase
APY30_04630	PF03976	Polyphosphate kinase 2 (PPK2)
APY30_04635	PF00994	Probable molybdopterin binding domain
APY30_04640	PF13844	Glycosyl transferase family 41
APY30_04640	PF14559	Tetratricopeptide repeat
APY30_04645	PF00472	RF-1 domain
APY30_04645	PF03462	PCRF domain
APY30_04650	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
APY30_04650	PF01488	Shikimate / quinate 5-dehydrogenase
APY30_04650	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
APY30_04655	PF13181	Tetratricopeptide repeat
APY30_04655	PF13432	Tetratricopeptide repeat
APY30_04655	PF14559	Tetratricopeptide repeat
APY30_04660	PF03550	Outer membrane lipoprotein LolB
APY30_04665	PF00288	GHMP kinases N terminal domain
APY30_04665	PF08544	GHMP kinases C terminal
APY30_04675	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
APY30_04675	PF14572	Phosphoribosyl synthetase-associated domain
APY30_04680	PF01386	Ribosomal L25p family
APY30_04680	PF14693	Ribosomal protein TL5, C-terminal domain
APY30_04685	PF01195	Peptidyl-tRNA hydrolase
APY30_04690	PF01926	50S ribosome-binding GTPase
APY30_04690	PF06071	Protein of unknown function (DUF933)
APY30_04710	PF00009	Elongation factor Tu GTP binding domain
APY30_04710	PF03143	Elongation factor Tu C-terminal domain
APY30_04710	PF03144	Elongation factor Tu domain 2
APY30_04720	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
APY30_04725	PF00467	KOW motif
APY30_04725	PF02357	Transcription termination factor nusG
APY30_04730	PF00298	Ribosomal protein L11, RNA binding domain
APY30_04730	PF03946	Ribosomal protein L11, N-terminal domain
APY30_04735	PF00687	Ribosomal protein L1p/L10e family
APY30_04740	PF00466	Ribosomal protein L10
APY30_04745	PF00542	Ribosomal protein L7/L12 C-terminal domain
APY30_04745	PF16320	APY30_04745
APY30_04750	PF00562	RNA polymerase Rpb2, domain 6
APY30_04750	PF04560	RNA polymerase Rpb2, domain 7
APY30_04750	PF04561	RNA polymerase Rpb2, domain 2
APY30_04750	PF04563	RNA polymerase beta subunit
APY30_04750	PF04565	RNA polymerase Rpb2, domain 3
APY30_04750	PF10385	RNA polymerase beta subunit external 1 domain
APY30_04755	PF00623	RNA polymerase Rpb1, domain 2
APY30_04755	PF04983	RNA polymerase Rpb1, domain 3
APY30_04755	PF04997	RNA polymerase Rpb1, domain 1
APY30_04755	PF04998	RNA polymerase Rpb1, domain 5
APY30_04755	PF05000	RNA polymerase Rpb1, domain 4
APY30_04760	PF00164	Ribosomal protein S12/S23
APY30_04765	PF00177	Ribosomal protein S7p/S5e
APY30_04770	PF00009	Elongation factor Tu GTP binding domain
APY30_04770	PF00679	Elongation factor G C-terminus
APY30_04770	PF03144	Elongation factor Tu domain 2
APY30_04770	PF03764	Elongation factor G, domain IV
APY30_04770	PF14492	Elongation Factor G, domain II
APY30_04775	PF00009	Elongation factor Tu GTP binding domain
APY30_04775	PF03143	Elongation factor Tu C-terminal domain
APY30_04775	PF03144	Elongation factor Tu domain 2
APY30_04780	PF00338	Ribosomal protein S10p/S20e
APY30_04785	PF00297	Ribosomal protein L3
APY30_04790	PF00573	Ribosomal protein L4/L1 family
APY30_04795	PF00276	Ribosomal protein L23
APY30_04800	PF00181	Ribosomal Proteins L2, RNA binding domain
APY30_04800	PF03947	Ribosomal Proteins L2, C-terminal domain
APY30_04805	PF00203	Ribosomal protein S19
APY30_04810	PF00237	Ribosomal protein L22p/L17e
APY30_04815	PF00189	Ribosomal protein S3, C-terminal domain
APY30_04815	PF07650	KH domain
APY30_04820	PF00252	Ribosomal protein L16p/L10e
APY30_04825	PF00831	Ribosomal L29 protein
APY30_04830	PF00366	Ribosomal protein S17
APY30_04835	PF00238	Ribosomal protein L14p/L23e
APY30_04840	PF00467	KOW motif
APY30_04840	PF17136	APY30_04840
APY30_04845	PF00281	Ribosomal protein L5
APY30_04845	PF00673	ribosomal L5P family C-terminus
APY30_04850	PF00253	Ribosomal protein S14p/S29e
APY30_04855	PF00410	Ribosomal protein S8
APY30_04860	PF00347	Ribosomal protein L6
APY30_04865	PF00861	Ribosomal L18p/L5e family
APY30_04870	PF00333	Ribosomal protein S5, N-terminal domain
APY30_04870	PF03719	Ribosomal protein S5, C-terminal domain
APY30_04875	PF00327	Ribosomal protein L30p/L7e
APY30_04880	PF00828	Ribosomal protein L18e/L15
APY30_04885	PF00344	SecY translocase
APY30_04890	PF00416	Ribosomal protein S13/S18
APY30_04895	PF00411	Ribosomal protein S11
APY30_04900	PF00163	Ribosomal protein S4/S9 N-terminal domain
APY30_04900	PF01479	S4 domain
APY30_04905	PF01000	RNA polymerase Rpb3/RpoA insert domain
APY30_04905	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
APY30_04905	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
APY30_04910	PF01196	Ribosomal protein L17
APY30_04915	PF02600	Disulfide bond formation protein DsbB
APY30_04925	PF00593	TonB dependent receptor
APY30_04925	PF07715	TonB-dependent Receptor Plug Domain
APY30_04930	PF01474	Class-II DAHP synthetase family
APY30_04935	PF00924	Mechanosensitive ion channel
APY30_04945	PF09900	APY30_04945
APY30_04950	PF00009	Elongation factor Tu GTP binding domain
APY30_04950	PF00679	Elongation factor G C-terminus
APY30_04950	PF03144	Elongation factor Tu domain 2
APY30_04955	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
APY30_04960	PF00056	lactate/malate dehydrogenase, NAD binding domain
APY30_04960	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
APY30_04965	PF00043	Glutathione S-transferase, C-terminal domain
APY30_04965	PF02798	Glutathione S-transferase, N-terminal domain
APY30_04970	PF07486	Cell Wall Hydrolase
APY30_04975	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
APY30_04975	PF07992	Pyridine nucleotide-disulphide oxidoreductase
APY30_04980	PF08240	Alcohol dehydrogenase GroES-like domain
APY30_04980	PF13602	Zinc-binding dehydrogenase
APY30_04985	PF00691	OmpA family
APY30_04985	PF13505	Outer membrane protein beta-barrel domain
APY30_04995	PF00849	RNA pseudouridylate synthase
APY30_04995	PF01479	S4 domain
APY30_05005	PF00155	Aminotransferase class I and II
APY30_05010	PF13531	Bacterial extracellular solute-binding protein
APY30_05015	PF00528	Binding-protein-dependent transport system inner membrane component
APY30_05020	PF00528	Binding-protein-dependent transport system inner membrane component
APY30_05025	PF00005	ABC transporter
APY30_05025	PF12857	APY30_05025
APY30_05030	PF09694	APY30_05030
APY30_05035	PF00107	Zinc-binding dehydrogenase
APY30_05035	PF08240	Alcohol dehydrogenase GroES-like domain
APY30_05040	PF00593	TonB dependent receptor
APY30_05040	PF07715	TonB-dependent Receptor Plug Domain
APY30_05045	PF04185	Phosphoesterase family
APY30_05045	PF05506	APY30_05045
APY30_05050	PF10459	Peptidase S46
APY30_05055	PF10459	Peptidase S46
APY30_05060	PF00300	Histidine phosphatase superfamily (branch 1)
APY30_05065	PF08245	Mur ligase middle domain
APY30_05075	PF02674	APY30_05075
APY30_05080	PF13522	Glutamine amidotransferase domain
APY30_05090	PF00665	Integrase core domain
APY30_05095	PF01527	Transposase
APY30_05105	PF13688	Metallo-peptidase family M12
APY30_05115	PF00149	Calcineurin-like phosphoesterase
APY30_05120	PF01569	PAP2 superfamily
APY30_05130	PF02541	Ppx/GppA phosphatase family
APY30_05135	PF02503	Polyphosphate kinase middle domain
APY30_05135	PF13089	Polyphosphate kinase N-terminal domain
APY30_05135	PF13090	Polyphosphate kinase C-terminal domain
APY30_05140	PF00512	His Kinase A (phospho-acceptor) domain
APY30_05140	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_05140	PF11808	APY30_05140
APY30_05145	PF00072	Response regulator receiver domain
APY30_05145	PF00486	Transcriptional regulatory protein, C terminal
APY30_05150	PF01435	Peptidase family M48
APY30_05155	PF00462	Glutaredoxin
APY30_05160	PF02627	Carboxymuconolactone decarboxylase family
APY30_05165	PF00180	Isocitrate/isopropylmalate dehydrogenase
APY30_05170	PF12811	APY30_05170
APY30_05205	PF01527	Transposase
APY30_05210	PF00665	Integrase core domain
APY30_05210	PF13276	APY30_05210
APY30_05220	PF00665	Integrase core domain
APY30_05225	PF01527	Transposase
APY30_05230	PF05069	APY30_05230
APY30_05235	PF06891	APY30_05235
APY30_05250	PF05449	APY30_05250
APY30_05255	PF16931	APY30_05255
APY30_05260	PF05489	Phage Tail Protein X
APY30_05265	PF05926	APY30_05265
APY30_05270	PF05944	APY30_05270
APY30_05275	PF05125	APY30_05275
APY30_05280	PF05929	APY30_05280
APY30_05285	PF03237	Terminase-like family
APY30_05285	PF06056	Putative ATPase subunit of terminase (gpP-like)
APY30_05285	PF17289	APY30_05285
APY30_05290	PF04860	Phage portal protein
APY30_05295	PF00665	Integrase core domain
APY30_05300	PF01527	Transposase
APY30_05310	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_05310	PF08448	PAS fold
APY30_05320	PF05697	Bacterial trigger factor protein (TF)
APY30_05320	PF05698	Bacterial trigger factor protein (TF) C-terminus
APY30_05325	PF00574	Clp protease
APY30_05330	PF06689	ClpX C4-type zinc finger
APY30_05330	PF07724	AAA domain (Cdc48 subfamily)
APY30_05330	PF10431	C-terminal, D2-small domain, of ClpB protein
APY30_05335	PF00004	ATPase family associated with various cellular activities (AAA)
APY30_05335	PF02190	ATP-dependent protease La (LON) domain
APY30_05335	PF05362	Lon protease (S16) C-terminal proteolytic domain
APY30_05340	PF00216	Bacterial DNA-binding protein
APY30_05360	PF13145	PPIC-type PPIASE domain
APY30_05360	PF13616	PPIC-type PPIASE domain
APY30_05360	PF13623	APY30_05360
APY30_05365	PF01464	Transglycosylase SLT domain
APY30_05365	PF01476	LysM domain
APY30_05370	PF00753	Metallo-beta-lactamase superfamily
APY30_05370	PF16123	APY30_05370
APY30_05380	PF00075	RNase H
APY30_05385	PF00929	Exonuclease
APY30_05390	PF13672	Protein phosphatase 2C
APY30_05405	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
APY30_05410	PF06293	Lipopolysaccharide kinase (Kdo/WaaP) family
APY30_05415	PF12706	Beta-lactamase superfamily domain
APY30_05420	PF04055	Radical SAM superfamily
APY30_05420	PF06463	Molybdenum Cofactor Synthesis C
APY30_05420	PF13353	4Fe-4S single cluster domain
APY30_05430	PF01967	MoaC family
APY30_05435	PF02597	ThiS family
APY30_05440	PF02391	MoaE protein
APY30_05450	PF12169	DNA polymerase III subunits gamma and tau domain III
APY30_05450	PF12170	DNA polymerase III tau subunit V interacting with alpha
APY30_05450	PF13177	DNA polymerase III, delta subunit
APY30_05455	PF02575	YbaB/EbfC DNA-binding family
APY30_05460	PF02132	RecR protein
APY30_05460	PF13662	Toprim domain
APY30_05465	PF01230	HIT domain
APY30_05470	PF03843	APY30_05470
APY30_05475	PF01841	Transglutaminase-like superfamily
APY30_05475	PF11992	APY30_05475
APY30_05480	PF01882	APY30_05480
APY30_05485	PF07726	ATPase family associated with various cellular activities (AAA)
APY30_05490	PF13231	APY30_05490
APY30_05495	PF00535	Glycosyl transferase family 2
APY30_05505	PF02545	Maf-like protein
APY30_05510	PF02620	APY30_05510
APY30_05515	PF01783	Ribosomal L32p protein family
APY30_05520	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
APY30_05520	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
APY30_05525	PF08670	APY30_05525
APY30_05530	PF00698	Acyl transferase domain
APY30_05535	PF13561	Enoyl-(Acyl carrier protein) reductase
APY30_05540	PF00550	Phosphopantetheine attachment site
APY30_05545	PF00109	Beta-ketoacyl synthase, N-terminal domain
APY30_05545	PF02801	Beta-ketoacyl synthase, C-terminal domain
APY30_05550	PF00425	chorismate binding enzyme
APY30_05555	PF02618	YceG-like family
APY30_05560	PF13177	DNA polymerase III, delta subunit
APY30_05565	PF07238	PilZ domain
APY30_05580	PF00158	Sigma-54 interaction domain
APY30_05580	PF02954	Bacterial regulatory protein, Fis family
APY30_05580	PF06506	Propionate catabolism activator
APY30_05585	PF13714	Phosphoenolpyruvate phosphomutase
APY30_05590	PF00285	Citrate synthase
APY30_05595	PF00330	Aconitase family (aconitate hydratase)
APY30_05595	PF00694	Aconitase C-terminal domain
APY30_05605	PF04303	PrpF protein
APY30_05610	PF00593	TonB dependent receptor
APY30_05610	PF07715	TonB-dependent Receptor Plug Domain
APY30_05615	PF01156	Inosine-uridine preferring nucleoside hydrolase
APY30_05620	PF00207	Alpha-2-macroglobulin family
APY30_05620	PF01835	MG2 domain
APY30_05620	PF07703	Alpha-2-macroglobulin family N-terminal region
APY30_05620	PF11974	Alpha-2-macroglobulin MG1 domain
APY30_05625	PF00593	TonB dependent receptor
APY30_05625	PF07715	TonB-dependent Receptor Plug Domain
APY30_05630	PF03009	Glycerophosphoryl diester phosphodiesterase family
APY30_05630	PF16387	APY30_05630
APY30_05635	PF00905	Penicillin binding protein transpeptidase domain
APY30_05635	PF00912	Transglycosylase
APY30_05635	PF06832	APY30_05635
APY30_05640	PF00210	Ferritin-like domain
APY30_05645	PF08534	Redoxin
APY30_05650	PF00011	Hsp20/alpha crystallin family
APY30_05655	PF00226	DnaJ domain
APY30_05655	PF01556	DnaJ C terminal domain
APY30_05660	PF00072	Response regulator receiver domain
APY30_05665	PF01145	SPFH domain / Band 7 family
APY30_05670	PF01145	SPFH domain / Band 7 family
APY30_05675	PF01797	Transposase IS200 like
APY30_05680	PF00709	Adenylosuccinate synthetase
APY30_05685	PF01433	Peptidase family M1
APY30_05685	PF11838	ERAP1-like C-terminal domain
APY30_05695	PF13561	Enoyl-(Acyl carrier protein) reductase
APY30_05700	PF00440	Bacterial regulatory proteins, tetR family
APY30_05720	PF05016	Plasmid stabilisation system protein
APY30_05725	PF00176	SNF2 family N-terminal domain
APY30_05725	PF00271	Helicase conserved C-terminal domain
APY30_05730	PF13304	AAA domain
APY30_05735	PF10592	APY30_05735
APY30_05740	PF01555	DNA methylase
APY30_05745	PF04851	Type III restriction enzyme, res subunit
APY30_05755	PF00440	Bacterial regulatory proteins, tetR family
APY30_05760	PF00300	Histidine phosphatase superfamily (branch 1)
APY30_05765	PF01256	Carbohydrate kinase
APY30_05770	PF02055	O-Glycosyl hydrolase family 30
APY30_05770	PF17189	APY30_05770
APY30_05780	PF13561	Enoyl-(Acyl carrier protein) reductase
APY30_05785	PF07971	Glycosyl hydrolase family 92
APY30_05790	PF00106	short chain dehydrogenase
APY30_05795	PF13532	2OG-Fe(II) oxygenase superfamily
APY30_05800	PF00027	Cyclic nucleotide-binding domain
APY30_05800	PF07992	Pyridine nucleotide-disulphide oxidoreductase
APY30_05805	PF02148	Zn-finger in ubiquitin-hydrolases and other protein
APY30_05810	PF00563	EAL domain
APY30_05815	PF13328	HD domain
APY30_05825	PF00005	ABC transporter
APY30_05830	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
APY30_05830	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
APY30_05835	PF00941	FAD binding domain in molybdopterin dehydrogenase
APY30_05835	PF03450	CO dehydrogenase flavoprotein C-terminal domain
APY30_05840	PF00111	2Fe-2S iron-sulfur cluster binding domain
APY30_05840	PF01799	[2Fe-2S] binding domain
APY30_05845	PF05559	APY30_05845
APY30_05855	PF07883	Cupin domain
APY30_05865	PF02661	Fic/DOC family
APY30_05870	PF04014	Antidote-toxin recognition MazE
APY30_05875	PF00717	Peptidase S24-like
APY30_05875	PF01726	LexA DNA binding domain
APY30_05885	PF00817	impB/mucB/samB family
APY30_05890	PF02811	PHP domain
APY30_05890	PF07733	Bacterial DNA polymerase III alpha subunit
APY30_05890	PF14579	Helix-hairpin-helix motif
APY30_05895	PF00326	Prolyl oligopeptidase family
APY30_05900	PF08668	HDOD domain
APY30_05905	PF03169	APY30_05905
APY30_05910	PF13557	APY30_05910
APY30_05920	PF00326	Prolyl oligopeptidase family
APY30_05920	PF07676	WD40-like Beta Propeller Repeat
APY30_05925	PF00665	Integrase core domain
APY30_05930	PF01527	Transposase
APY30_05950	PF08448	PAS fold
APY30_05950	PF12833	Helix-turn-helix domain
APY30_05970	PF00665	Integrase core domain
APY30_05975	PF01527	Transposase
APY30_05985	PF00199	Catalase
APY30_05985	PF06628	Catalase-related immune-responsive
APY30_05990	PF00248	Aldo/keto reductase family
APY30_05995	PF00135	Carboxylesterase family
APY30_06000	PF02347	Glycine cleavage system P-protein
APY30_06005	PF07690	Major Facilitator Superfamily
APY30_06015	PF01401	Angiotensin-converting enzyme
APY30_06020	PF00884	Sulfatase
APY30_06020	PF08019	APY30_06020
APY30_06025	PF01569	PAP2 superfamily
APY30_06030	PF13231	APY30_06030
APY30_06035	PF00072	Response regulator receiver domain
APY30_06035	PF00486	Transcriptional regulatory protein, C terminal
APY30_06040	PF00512	His Kinase A (phospho-acceptor) domain
APY30_06040	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_06050	PF03776	Septum formation topological specificity factor MinE
APY30_06055	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
APY30_06060	PF03775	Septum formation inhibitor MinC, C-terminal domain
APY30_06060	PF05209	Septum formation inhibitor MinC, N-terminal domain
APY30_06065	PF00583	Acetyltransferase (GNAT) family
APY30_06070	PF07730	Histidine kinase
APY30_06075	PF00072	Response regulator receiver domain
APY30_06075	PF00196	Bacterial regulatory proteins, luxR family
APY30_06080	PF10604	Polyketide cyclase / dehydrase and lipid transport
APY30_06085	PF04241	APY30_06085
APY30_06090	PF00730	HhH-GPD superfamily base excision DNA repair protein
APY30_06095	PF02557	D-alanyl-D-alanine carboxypeptidase
APY30_06110	PF01145	SPFH domain / Band 7 family
APY30_06115	PF02222	ATP-grasp domain
APY30_06120	PF03372	Endonuclease/Exonuclease/phosphatase family
APY30_06125	PF04376	APY30_06125
APY30_06125	PF04377	APY30_06125
APY30_06130	PF13202	EF hand
APY30_06130	PF13499	EF-hand domain pair
APY30_06145	PF09413	Domain of unknown function (DUF2007)
APY30_06150	PF13622	Thioesterase-like superfamily
APY30_06155	PF00378	Enoyl-CoA hydratase/isomerase family
APY30_06160	PF04314	Protein of unknown function (DUF461)
APY30_06165	PF13279	Thioesterase-like superfamily
APY30_06170	PF00005	ABC transporter
APY30_06175	PF00829	Ribosomal prokaryotic L21 protein
APY30_06180	PF01016	Ribosomal L27 protein
APY30_06185	PF01018	GTP1/OBG
APY30_06185	PF01926	50S ribosome-binding GTPase
APY30_06190	PF01649	Ribosomal protein S20
APY30_06195	PF03023	APY30_06195
APY30_06200	PF01687	Riboflavin kinase
APY30_06200	PF06574	FAD synthetase
APY30_06205	PF00133	tRNA synthetases class I (I, L, M and V)
APY30_06205	PF06827	Zinc finger found in FPG and IleRS
APY30_06205	PF08264	Anticodon-binding domain of tRNA
APY30_06210	PF01252	APY30_06210
APY30_06215	PF02401	LytB protein
APY30_06225	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
APY30_06225	PF06481	COX Aromatic Rich Motif
APY30_06230	PF00115	Cytochrome C and Quinol oxidase polypeptide I
APY30_06235	PF00510	Cytochrome c oxidase subunit III
APY30_06240	PF03626	APY30_06240
APY30_06245	PF05299	M61 glycyl aminopeptidase
APY30_06245	PF07720	Tetratricopeptide repeat
APY30_06250	PF13481	AAA domain
APY30_06250	PF13541	Subunit ChlI of Mg-chelatase
APY30_06255	PF05656	APY30_06255
APY30_06260	PF00486	Transcriptional regulatory protein, C terminal
APY30_06265	PF12833	Helix-turn-helix domain
APY30_06270	PF00183	Hsp90 protein
APY30_06270	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_06280	PF01740	STAS domain
APY30_06280	PF14361	APY30_06280
APY30_06290	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_06295	PF07228	Stage II sporulation protein E (SpoIIE)
APY30_06295	PF13581	Histidine kinase-like ATPase domain
APY30_06300	PF00512	His Kinase A (phospho-acceptor) domain
APY30_06300	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_06305	PF00072	Response regulator receiver domain
APY30_06305	PF00512	His Kinase A (phospho-acceptor) domain
APY30_06305	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_06305	PF08448	PAS fold
APY30_06310	PF04616	Glycosyl hydrolases family 43
APY30_06315	PF00593	TonB dependent receptor
APY30_06315	PF07715	TonB-dependent Receptor Plug Domain
APY30_06320	PF00085	Thioredoxin
APY30_06325	PF07237	Protein of unknown function (DUF1428)
APY30_06330	PF00072	Response regulator receiver domain
APY30_06330	PF00512	His Kinase A (phospho-acceptor) domain
APY30_06330	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_06335	PF01339	CheB methylesterase
APY30_06340	PF01739	CheR methyltransferase, SAM binding domain
APY30_06340	PF03705	CheR methyltransferase, all-alpha domain
APY30_06345	PF00072	Response regulator receiver domain
APY30_06345	PF00512	His Kinase A (phospho-acceptor) domain
APY30_06345	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_06345	PF13185	GAF domain
APY30_06350	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_06350	PF13426	PAS domain
APY30_06355	PF00072	Response regulator receiver domain
APY30_06360	PF00722	Glycosyl hydrolases family 16
APY30_06365	PF06964	Alpha-L-arabinofuranosidase C-terminus
APY30_06375	PF01263	Aldose 1-epimerase
APY30_06385	PF01578	APY30_06385
APY30_06390	PF00448	SRP54-type protein, GTPase domain
APY30_06390	PF02881	SRP54-type protein, helical bundle domain
APY30_06390	PF02978	Signal peptide binding domain
APY30_06395	PF03060	Nitronate monooxygenase
APY30_06400	PF01063	Aminotransferase class IV
APY30_06405	PF00886	Ribosomal protein S16
APY30_06410	PF01782	RimM N-terminal domain
APY30_06410	PF05239	PRC-barrel domain
APY30_06415	PF01746	tRNA (Guanine-1)-methyltransferase
APY30_06420	PF01245	Ribosomal protein L19
APY30_06425	PF01554	MatE
APY30_06435	PF08279	HTH domain
APY30_06435	PF13280	APY30_06435
APY30_06440	PF00043	Glutathione S-transferase, C-terminal domain
APY30_06440	PF13417	Glutathione S-transferase, N-terminal domain
APY30_06445	PF01479	S4 domain
APY30_06450	PF00141	Peroxidase
APY30_06455	PF06078	Bacterial protein of unknown function (DUF937)
APY30_06460	PF00488	MutS domain V
APY30_06460	PF01624	MutS domain I
APY30_06460	PF05188	MutS domain II
APY30_06460	PF05190	MutS family domain IV
APY30_06460	PF05192	MutS domain III
APY30_06475	PF01527	Transposase
APY30_06480	PF00665	Integrase core domain
APY30_06480	PF13276	APY30_06480
APY30_06500	PF00665	Integrase core domain
APY30_06505	PF01527	Transposase
APY30_06510	PF00754	F5/8 type C domain
APY30_06510	PF01120	Alpha-L-fucosidase
APY30_06520	PF00703	Glycosyl hydrolases family 2
APY30_06520	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
APY30_06520	PF02837	Glycosyl hydrolases family 2, sugar binding domain
APY30_06520	PF16355	APY30_06520
APY30_06525	PF07745	Glycosyl hydrolase family 53
APY30_06530	PF00593	TonB dependent receptor
APY30_06530	PF07715	TonB-dependent Receptor Plug Domain
APY30_06535	PF06114	Domain of unknown function (DUF955)
APY30_06535	PF09856	APY30_06535
APY30_06535	PF13560	Helix-turn-helix domain
APY30_06540	PF00171	Aldehyde dehydrogenase family
APY30_06545	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
APY30_06545	PF02770	Acyl-CoA dehydrogenase, middle domain
APY30_06545	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
APY30_06550	PF00378	Enoyl-CoA hydratase/isomerase family
APY30_06555	PF16113	APY30_06555
APY30_06560	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
APY30_06560	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
APY30_06565	PF01545	Cation efflux family
APY30_06570	PF00378	Enoyl-CoA hydratase/isomerase family
APY30_06570	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
APY30_06570	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
APY30_06575	PF04542	Sigma-70 region 2
APY30_06575	PF08281	Sigma-70, region 4
APY30_06580	PF03872	Anti sigma-E protein RseA, N-terminal domain
APY30_06585	PF13180	PDZ domain
APY30_06585	PF13365	Trypsin-like peptidase domain
APY30_06590	PF00009	Elongation factor Tu GTP binding domain
APY30_06590	PF00679	Elongation factor G C-terminus
APY30_06590	PF03144	Elongation factor Tu domain 2
APY30_06590	PF06421	GTP-binding protein LepA C-terminus
APY30_06595	PF00717	Peptidase S24-like
APY30_06600	PF16137	APY30_06600
APY30_06605	PF00035	Double-stranded RNA binding motif
APY30_06605	PF14622	Ribonuclease-III-like
APY30_06610	PF01926	50S ribosome-binding GTPase
APY30_06610	PF07650	KH domain
APY30_06615	PF02565	Recombination protein O C terminal
APY30_06615	PF11967	Recombination protein O N terminal
APY30_06620	PF00072	Response regulator receiver domain
APY30_06620	PF01627	Hpt domain
APY30_06625	PF05958	tRNA (Uracil-5-)-methyltransferase
APY30_06635	PF01323	DSBA-like thioredoxin domain
APY30_06640	PF13450	NAD(P)-binding Rossmann-like domain
APY30_06645	PF04244	Deoxyribodipyrimidine photo-lyase-related protein
APY30_06650	PF00933	Glycosyl hydrolase family 3 N terminal domain
APY30_06655	PF00156	Phosphoribosyl transferase domain
APY30_06665	PF00313	'Cold-shock' DNA-binding domain
APY30_06670	PF01494	FAD binding domain
APY30_06675	PF00149	Calcineurin-like phosphoesterase
APY30_06680	PF00270	DEAD/DEAH box helicase
APY30_06680	PF00271	Helicase conserved C-terminal domain
APY30_06680	PF08494	APY30_06680
APY30_06685	PF01068	ATP dependent DNA ligase domain
APY30_06685	PF04675	DNA ligase N terminus
APY30_06685	PF04679	ATP dependent DNA ligase C terminal region
APY30_06705	PF04519	APY30_06705
APY30_06710	PF00990	GGDEF domain
APY30_06710	PF05227	CHASE3 domain
APY30_06710	PF13185	GAF domain
APY30_06725	PF00108	Thiolase, N-terminal domain
APY30_06725	PF02803	Thiolase, C-terminal domain
APY30_06730	PF00082	Subtilase family
APY30_06730	PF03797	Autotransporter beta-domain
APY30_06730	PF12951	APY30_06730
APY30_06735	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
APY30_06735	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
APY30_06740	PF13640	2OG-Fe(II) oxygenase superfamily
APY30_06745	PF01863	Protein of unknown function DUF45
APY30_06750	PF07043	APY30_06750
APY30_06755	PF10982	Protein of unknown function (DUF2789)
APY30_06760	PF01258	Prokaryotic dksA/traR C4-type zinc finger
APY30_06765	PF00924	Mechanosensitive ion channel
APY30_06780	PF06723	MreB/Mbl protein
APY30_06785	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
APY30_06790	PF01545	Cation efflux family
APY30_06795	PF03831	PhnA protein
APY30_06795	PF08274	PhnA Zinc-Ribbon
APY30_06805	PF07690	Major Facilitator Superfamily
APY30_06815	PF09537	Domain of unknown function (DUF2383)
APY30_06820	PF13563	2'-5' RNA ligase superfamily
APY30_06830	PF09791	APY30_06830
APY30_06835	PF06057	Bacterial virulence protein (VirJ)
APY30_06840	PF03706	APY30_06840
APY30_06840	PF09924	Uncharacterized conserved protein (DUF2156)
APY30_06845	PF06197	APY30_06845
APY30_06850	PF01042	Endoribonuclease L-PSP
APY30_06855	PF02353	Mycolic acid cyclopropane synthetase
APY30_06860	PF06966	APY30_06860
APY30_06865	PF11086	APY30_06865
APY30_06870	PF02353	Mycolic acid cyclopropane synthetase
APY30_06875	PF07103	APY30_06875
APY30_06880	PF01593	Flavin containing amine oxidoreductase
APY30_06885	PF00487	APY30_06885
APY30_06890	PF10099	APY30_06890
APY30_06895	PF04542	Sigma-70 region 2
APY30_06895	PF08281	Sigma-70, region 4
APY30_06915	PF04060	Putative Fe-S cluster
APY30_06915	PF14697	4Fe-4S dicluster domain
APY30_06920	PF12710	haloacid dehalogenase-like hydrolase
APY30_06925	PF01588	Putative tRNA binding domain
APY30_06925	PF09334	tRNA synthetases class I (M)
APY30_06930	PF09917	Uncharacterized protein conserved in bacteria (DUF2147)
APY30_06935	PF01433	Peptidase family M1
APY30_06935	PF12679	APY30_06935
APY30_06940	PF00005	ABC transporter
APY30_06945	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
APY30_06950	PF00324	Amino acid permease
APY30_06955	PF02574	Homocysteine S-methyltransferase
APY30_06960	PF05960	Bacterial protein of unknown function (DUF885)
APY30_06965	PF02592	APY30_06965
APY30_06970	PF04367	APY30_06970
APY30_06980	PF13372	Alginate export
APY30_06985	PF03551	Transcriptional regulator PadR-like family
APY30_06990	PF13796	APY30_06990
APY30_06995	PF06850	APY30_06995
APY30_07000	PF13489	Methyltransferase domain
APY30_07005	PF03653	APY30_07005
APY30_07015	PF14559	Tetratricopeptide repeat
APY30_07020	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
APY30_07025	PF01336	OB-fold nucleic acid binding domain
APY30_07025	PF02811	PHP domain
APY30_07025	PF07733	Bacterial DNA polymerase III alpha subunit
APY30_07025	PF14579	Helix-hairpin-helix motif
APY30_07030	PF01351	Ribonuclease HII
APY30_07035	PF02684	APY30_07035
APY30_07040	PF00132	Bacterial transferase hexapeptide (six repeats)
APY30_07040	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2
APY30_07045	PF07977	FabA-like domain
APY30_07050	PF00132	Bacterial transferase hexapeptide (six repeats)
APY30_07050	PF04613	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD
APY30_07060	PF01103	Surface antigen
APY30_07060	PF07244	Surface antigen variable number repeat
APY30_07065	PF02163	Peptidase family M50
APY30_07070	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
APY30_07070	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal
APY30_07070	PF13288	DXP reductoisomerase C-terminal domain
APY30_07075	PF01148	Cytidylyltransferase family
APY30_07080	PF01255	Putative undecaprenyl diphosphate synthase
APY30_07085	PF01765	Ribosome recycling factor
APY30_07090	PF00696	Amino acid kinase family
APY30_07095	PF00990	GGDEF domain
APY30_07095	PF08668	HDOD domain
APY30_07100	PF00889	Elongation factor TS
APY30_07105	PF00318	Ribosomal protein S2
APY30_07110	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
APY30_07120	PF05229	APY30_07120
APY30_07125	PF00577	Outer membrane usher protein
APY30_07125	PF13953	PapC C-terminal domain
APY30_07130	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
APY30_07135	PF05229	APY30_07135
APY30_07140	PF00557	Metallopeptidase family M24
APY30_07145	PF01909	Nucleotidyltransferase domain
APY30_07145	PF01966	HD domain
APY30_07145	PF08335	GlnD PII-uridylyltransferase
APY30_07150	PF00132	Bacterial transferase hexapeptide (six repeats)
APY30_07150	PF14602	Hexapeptide repeat of succinyl-transferase
APY30_07150	PF14805	Tetrahydrodipicolinate N-succinyltransferase N-terminal
APY30_07155	PF03960	ArsC family
APY30_07160	PF01546	Peptidase family M20/M25/M40
APY30_07160	PF07687	Peptidase dimerisation domain
APY30_07165	PF00733	Asparagine synthase
APY30_07165	PF13537	Glutamine amidotransferase domain
APY30_07170	PF13229	Right handed beta helix region
APY30_07175	PF00593	TonB dependent receptor
APY30_07175	PF07715	TonB-dependent Receptor Plug Domain
APY30_07185	PF00210	Ferritin-like domain
APY30_07190	PF05724	Thiopurine S-methyltransferase (TPMT)
APY30_07195	PF00521	DNA gyrase/topoisomerase IV, subunit A
APY30_07195	PF03989	DNA gyrase C-terminal domain, beta-propeller
APY30_07205	PF01047	MarR family
APY30_07210	PF02321	Outer membrane efflux protein
APY30_07215	PF00529	HlyD family secretion protein
APY30_07215	PF16576	APY30_07215
APY30_07220	PF07690	Major Facilitator Superfamily
APY30_07230	PF00933	Glycosyl hydrolase family 3 N terminal domain
APY30_07230	PF01915	Glycosyl hydrolase family 3 C-terminal domain
APY30_07230	PF14310	Fibronectin type III-like domain
APY30_07235	PF00246	Zinc carboxypeptidase
APY30_07240	PF00854	POT family
APY30_07245	PF01694	Rhomboid family
APY30_07255	PF14542	GCN5-related N-acetyl-transferase
APY30_07265	PF01047	MarR family
APY30_07270	PF01432	Peptidase family M3
APY30_07275	PF00255	Glutathione peroxidase
APY30_07280	PF00175	Oxidoreductase NAD-binding domain
APY30_07280	PF00970	Oxidoreductase FAD-binding domain
APY30_07285	PF00005	ABC transporter
APY30_07290	PF05681	APY30_07290
APY30_07290	PF05683	Fumarase C-terminus
APY30_07300	PF02798	Glutathione S-transferase, N-terminal domain
APY30_07300	PF14497	Glutathione S-transferase, C-terminal domain
APY30_07305	PF00484	Carbonic anhydrase
APY30_07315	PF04306	APY30_07315
APY30_07320	PF00313	'Cold-shock' DNA-binding domain
APY30_07325	PF05433	APY30_07325
APY30_07335	PF00899	ThiF family
APY30_07340	PF01026	TatD related DNase
APY30_07350	PF05433	APY30_07350
APY30_07355	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
APY30_07355	PF02770	Acyl-CoA dehydrogenase, middle domain
APY30_07355	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
APY30_07365	PF00043	Glutathione S-transferase, C-terminal domain
APY30_07365	PF02798	Glutathione S-transferase, N-terminal domain
APY30_07375	PF00733	Asparagine synthase
APY30_07375	PF13537	Glutamine amidotransferase domain
APY30_07380	PF03358	NADPH-dependent FMN reductase
APY30_07385	PF00772	DnaB-like helicase N terminal domain
APY30_07385	PF03796	DnaB-like helicase C terminal domain
APY30_07390	PF00875	DNA photolyase
APY30_07390	PF03441	FAD binding domain of DNA photolyase
APY30_07395	PF00691	OmpA family
APY30_07395	PF13488	APY30_07395
APY30_07400	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
APY30_07400	PF03466	LysR substrate binding domain
APY30_07410	PF00106	short chain dehydrogenase
APY30_07415	PF16576	APY30_07415
APY30_07420	PF00873	AcrB/AcrD/AcrF family
APY30_07425	PF00106	short chain dehydrogenase
APY30_07430	PF02321	Outer membrane efflux protein
APY30_07435	PF00990	GGDEF domain
APY30_07445	PF00990	GGDEF domain
APY30_07445	PF05227	CHASE3 domain
APY30_07445	PF13185	GAF domain
APY30_07455	PF01527	Transposase
APY30_07460	PF00665	Integrase core domain
APY30_07460	PF13276	APY30_07460
APY30_07465	PF13437	HlyD family secretion protein
APY30_07470	PF00005	ABC transporter
APY30_07470	PF00664	ABC transporter transmembrane region
APY30_07470	PF03412	Peptidase C39 family
APY30_07480	PF00665	Integrase core domain
APY30_07485	PF01527	Transposase
APY30_07495	PF00082	Subtilase family
APY30_07500	PF01668	SmpB protein
APY30_07505	PF03364	Polyketide cyclase / dehydrase and lipid transport
APY30_07510	PF03658	RnfH family Ubiquitin
APY30_07515	PF04355	SmpA / OmlA family
APY30_07520	PF01475	Ferric uptake regulator family
APY30_07525	PF02463	RecF/RecN/SMC N terminal domain
APY30_07530	PF01628	HrcA protein C terminal domain
APY30_07530	PF03444	Winged helix-turn-helix transcription repressor, HrcA DNA-binding
APY30_07535	PF01025	GrpE
APY30_07540	PF00012	Hsp70 protein
APY30_07545	PF00226	DnaJ domain
APY30_07545	PF00684	DnaJ central domain
APY30_07545	PF01556	DnaJ C terminal domain
APY30_07550	PF08543	Phosphomethylpyrimidine kinase
APY30_07555	PF01842	ACT domain
APY30_07555	PF02153	Prephenate dehydrogenase
APY30_07565	PF02321	Outer membrane efflux protein
APY30_07570	PF16576	APY30_07570
APY30_07580	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
APY30_07580	PF03466	LysR substrate binding domain
APY30_07585	PF00005	ABC transporter
APY30_07585	PF00664	ABC transporter transmembrane region
APY30_07590	PF01205	Uncharacterized protein family UPF0029
APY30_07590	PF09186	Domain of unknown function (DUF1949)
APY30_07595	PF03641	Possible lysine decarboxylase
APY30_07600	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
APY30_07600	PF07992	Pyridine nucleotide-disulphide oxidoreductase
APY30_07605	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
APY30_07605	PF00364	Biotin-requiring enzyme
APY30_07605	PF02817	e3 binding domain
APY30_07610	PF00676	Dehydrogenase E1 component
APY30_07610	PF02779	Transketolase, pyrimidine binding domain
APY30_07610	PF16078	APY30_07610
APY30_07610	PF16870	APY30_07610
APY30_07615	PF13673	Acetyltransferase (GNAT) domain
APY30_07620	PF08007	Cupin superfamily protein
APY30_07630	PF00206	Lyase
APY30_07630	PF08328	Adenylosuccinate lyase C-terminal
APY30_07635	PF00188	Cysteine-rich secretory protein family
APY30_07640	PF00571	CBS domain
APY30_07640	PF01595	APY30_07640
APY30_07640	PF03471	Transporter associated domain
APY30_07645	PF00206	Lyase
APY30_07645	PF10415	Fumarase C C-terminus
APY30_07655	PF11101	APY30_07655
APY30_07670	PF00005	ABC transporter
APY30_07675	PF00392	Bacterial regulatory proteins, gntR family
APY30_07680	PF00255	Glutathione peroxidase
APY30_07685	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
APY30_07685	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
APY30_07690	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
APY30_07690	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
APY30_07690	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
APY30_07695	PF04102	SlyX
APY30_07700	PF09831	APY30_07700
APY30_07705	PF13557	APY30_07705
APY30_07710	PF00356	Bacterial regulatory proteins, lacI family
APY30_07710	PF13377	Periplasmic binding protein-like domain
APY30_07715	PF07690	Major Facilitator Superfamily
APY30_07720	PF00294	pfkB family carbohydrate kinase
APY30_07725	PF07221	N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
APY30_07730	PF00809	Pterin binding enzyme
APY30_07730	PF02310	B12 binding domain
APY30_07730	PF02607	B12 binding domain
APY30_07730	PF02965	Vitamin B12 dependent methionine synthase, activation domain
APY30_07735	PF02574	Homocysteine S-methyltransferase
APY30_07740	PF01022	Bacterial regulatory protein, arsR family
APY30_07740	PF08241	Methyltransferase domain
APY30_07745	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
APY30_07745	PF02770	Acyl-CoA dehydrogenase, middle domain
APY30_07745	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
APY30_07750	PF13472	GDSL-like Lipase/Acylhydrolase family
APY30_07760	PF00575	S1 RNA binding domain
APY30_07760	PF00773	RNB domain
APY30_07760	PF08206	Ribonuclease B OB domain
APY30_07765	PF04828	Glutathione-dependent formaldehyde-activating enzyme
APY30_07770	PF00588	SpoU rRNA Methylase family
APY30_07770	PF08032	RNA 2'-O ribose methyltransferase substrate binding
APY30_07775	PF00990	GGDEF domain
APY30_07775	PF07494	Two component regulator propeller
APY30_07775	PF07495	Y_Y_Y domain
APY30_07780	PF00929	Exonuclease
APY30_07785	PF11776	Domain of unknown function (DUF3315)
APY30_07790	PF01895	PhoU domain
APY30_07795	PF00005	ABC transporter
APY30_07800	PF00528	Binding-protein-dependent transport system inner membrane component
APY30_07805	PF00528	Binding-protein-dependent transport system inner membrane component
APY30_07810	PF12849	PBP superfamily domain
APY30_07815	PF12849	PBP superfamily domain
APY30_07820	PF07396	Phosphate-selective porin O and P
APY30_07830	PF00484	Carbonic anhydrase
APY30_07835	PF00916	APY30_07835
APY30_07840	PF00633	Helix-hairpin-helix motif
APY30_07840	PF00730	HhH-GPD superfamily base excision DNA repair protein
APY30_07850	PF00378	Enoyl-CoA hydratase/isomerase family
APY30_07855	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
APY30_07855	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
APY30_07860	PF00293	NUDIX domain
APY30_07860	PF06945	APY30_07860
APY30_07865	PF00581	Rhodanese-like domain
APY30_07870	PF07920	Protein of unknown function (DUF1684)
APY30_07875	PF01510	N-acetylmuramoyl-L-alanine amidase
APY30_07880	PF03473	MOSC domain
APY30_07890	PF00583	Acetyltransferase (GNAT) family
APY30_07895	PF00005	ABC transporter
APY30_07900	PF01170	Putative RNA methylase family UPF0020
APY30_07900	PF02926	THUMP domain
APY30_07900	PF10672	S-adenosylmethionine-dependent methyltransferase
APY30_07905	PF01513	ATP-NAD kinase
APY30_07910	PF06189	APY30_07910
APY30_07915	PF11159	APY30_07915
APY30_07925	PF09365	APY30_07925
APY30_07930	PF00929	Exonuclease
APY30_07930	PF08411	Exonuclease C-terminal
APY30_07935	PF01494	FAD binding domain
APY30_07940	PF00266	Aminotransferase class-V
APY30_07945	PF13515	APY30_07945
APY30_07950	PF06052	3-hydroxyanthranilic acid dioxygenase
APY30_07955	PF00484	Carbonic anhydrase
APY30_07960	PF05838	Glycosyl hydrolase 108
APY30_07960	PF09374	Predicted Peptidoglycan domain
APY30_07965	PF11655	APY30_07965
APY30_07970	PF11655	APY30_07970
APY30_08000	PF00072	Response regulator receiver domain
APY30_08000	PF00196	Bacterial regulatory proteins, luxR family
APY30_08005	PF00161	Ribosome inactivating protein
APY30_08015	PF00665	Integrase core domain
APY30_08020	PF01527	Transposase
APY30_08025	PF04299	Putative FMN-binding domain
APY30_08040	PF00152	tRNA synthetases class II (D, K and N)
APY30_08040	PF01336	OB-fold nucleic acid binding domain
APY30_08045	PF01521	Iron-sulphur cluster biosynthesis
APY30_08050	PF01250	Ribosomal protein S6
APY30_08055	PF01084	Ribosomal protein S18
APY30_08060	PF01281	Ribosomal protein L9, N-terminal domain
APY30_08060	PF03948	Ribosomal protein L9, C-terminal domain
APY30_08065	PF02463	RecF/RecN/SMC N terminal domain
APY30_08070	PF04354	ZipA, C-terminal FtsZ-binding domain
APY30_08080	PF12760	Transposase zinc-ribbon domain
APY30_08080	PF12762	APY30_08080
APY30_08085	PF00155	Aminotransferase class I and II
APY30_08090	PF00533	BRCA1 C Terminus (BRCT) domain
APY30_08090	PF01653	NAD-dependent DNA ligase adenylation domain
APY30_08090	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
APY30_08090	PF03120	NAD-dependent DNA ligase OB-fold domain
APY30_08090	PF12826	Helix-hairpin-helix motif
APY30_08095	PF00152	tRNA synthetases class II (D, K and N)
APY30_08100	PF11218	APY30_08100
APY30_08105	PF01008	Initiation factor 2 subunit family
APY30_08110	PF00521	DNA gyrase/topoisomerase IV, subunit A
APY30_08110	PF03989	DNA gyrase C-terminal domain, beta-propeller
APY30_08115	PF13360	PQQ-like domain
APY30_08125	PF01175	Urocanase
APY30_08125	PF17391	APY30_08125
APY30_08125	PF17392	APY30_08125
APY30_08130	PF05013	N-formylglutamate amidohydrolase
APY30_08135	PF00221	Aromatic amino acid lyase
APY30_08140	PF07969	Amidohydrolase family
APY30_08145	PF01979	Amidohydrolase family
APY30_08155	PF00392	Bacterial regulatory proteins, gntR family
APY30_08155	PF07702	UTRA domain
APY30_08160	PF04471	Restriction endonuclease
APY30_08165	PF05597	APY30_08165
APY30_08170	PF09650	APY30_08170
APY30_08175	PF16697	APY30_08175
APY30_08180	PF01794	APY30_08180
APY30_08185	PF00174	Oxidoreductase molybdopterin binding domain
APY30_08190	PF00266	Aminotransferase class-V
APY30_08195	PF00800	Prephenate dehydratase
APY30_08195	PF01817	Chorismate mutase type II
APY30_08195	PF01842	ACT domain
APY30_08200	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
APY30_08205	PF03544	Gram-negative bacterial TonB protein C-terminal
APY30_08210	PF03544	Gram-negative bacterial TonB protein C-terminal
APY30_08215	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
APY30_08215	PF02403	Seryl-tRNA synthetase N-terminal domain
APY30_08220	PF02525	Flavodoxin-like fold
APY30_08225	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
APY30_08225	PF03466	LysR substrate binding domain
APY30_08240	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
APY30_08240	PF12729	APY30_08240
APY30_08245	PF01494	FAD binding domain
APY30_08250	PF01047	MarR family
APY30_08270	PF00072	Response regulator receiver domain
APY30_08280	PF00072	Response regulator receiver domain
APY30_08280	PF00512	His Kinase A (phospho-acceptor) domain
APY30_08280	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_08280	PF08448	PAS fold
APY30_08290	PF03918	Cytochrome C biogenesis protein
APY30_08295	PF08534	Redoxin
APY30_08300	PF01578	APY30_08300
APY30_08300	PF16327	APY30_08300
APY30_08305	PF03100	CcmE
APY30_08310	PF04995	APY30_08310
APY30_08315	PF01578	APY30_08315
APY30_08320	PF00082	Subtilase family
APY30_08325	PF13490	Putative zinc-finger
APY30_08330	PF04542	Sigma-70 region 2
APY30_08330	PF08281	Sigma-70, region 4
APY30_08345	PF12760	Transposase zinc-ribbon domain
APY30_08345	PF12762	APY30_08345
APY30_08355	PF00665	Integrase core domain
APY30_08355	PF13276	APY30_08355
APY30_08360	PF01527	Transposase
APY30_08365	PF01526	APY30_08365
APY30_08370	PF01471	Putative peptidoglycan binding domain
APY30_08370	PF13406	Transglycosylase SLT domain
APY30_08380	PF00665	Integrase core domain
APY30_08385	PF01527	Transposase
APY30_08400	PF00034	Cytochrome c
APY30_08410	PF01292	Prokaryotic cytochrome b561
APY30_08415	PF05523	WxcM-like, C-terminal
APY30_08420	PF00132	Bacterial transferase hexapeptide (six repeats)
APY30_08430	PF13480	Acetyltransferase (GNAT) domain
APY30_08435	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
APY30_08440	PF01943	APY30_08440
APY30_08445	PF00535	Glycosyl transferase family 2
APY30_08455	PF02706	Chain length determinant protein
APY30_08460	PF13649	Methyltransferase domain
APY30_08465	PF01979	Amidohydrolase family
APY30_08470	PF08241	Methyltransferase domain
APY30_08475	PF00534	Glycosyl transferases group 1
APY30_08475	PF13439	Glycosyltransferase Family 4
APY30_08480	PF00534	Glycosyl transferases group 1
APY30_08480	PF13579	Glycosyl transferase 4-like domain
APY30_08485	PF14907	Uncharacterised nucleotidyltransferase
APY30_08490	PF04055	Radical SAM superfamily
APY30_08500	PF00005	ABC transporter
APY30_08505	PF00083	Sugar (and other) transporter
APY30_08510	PF00296	Luciferase-like monooxygenase
APY30_08515	PF16242	APY30_08515
APY30_08520	PF06055	APY30_08520
APY30_08525	PF00571	CBS domain
APY30_08525	PF01595	APY30_08525
APY30_08525	PF03471	Transporter associated domain
APY30_08530	PF01865	Protein of unknown function DUF47
APY30_08535	PF01384	APY30_08535
APY30_08540	PF02698	DUF218 domain
APY30_08550	PF00204	DNA gyrase B
APY30_08550	PF00986	DNA gyrase B subunit, carboxyl terminus
APY30_08550	PF01751	Toprim domain
APY30_08550	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_08560	PF00117	Glutamine amidotransferase class-I
APY30_08560	PF06418	CTP synthase N-terminus
APY30_08565	PF00793	DAHP synthetase I family
APY30_08575	PF00113	Enolase, C-terminal TIM barrel domain
APY30_08575	PF03952	Enolase, N-terminal domain
APY30_08580	PF04977	Septum formation initiator
APY30_08585	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
APY30_08590	PF02542	YgbB family
APY30_08595	PF01142	tRNA pseudouridine synthase D (TruD)
APY30_08600	PF01713	Smr domain
APY30_08605	PF01975	Survival protein SurE
APY30_08610	PF01135	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
APY30_08615	PF09335	APY30_08615
APY30_08620	PF01476	LysM domain
APY30_08620	PF01551	Peptidase family M23
APY30_08625	PF04430	Protein of unknown function (DUF498/DUF598)
APY30_08630	PF01985	CRS1 / YhbY (CRM) domain
APY30_08635	PF01728	FtsJ-like methyltransferase
APY30_08640	PF00004	ATPase family associated with various cellular activities (AAA)
APY30_08640	PF01434	Peptidase family M41
APY30_08640	PF06480	FtsH Extracellular
APY30_08645	PF00809	Pterin binding enzyme
APY30_08650	PF01715	IPP transferase
APY30_08655	PF17209	APY30_08655
APY30_08660	PF01926	50S ribosome-binding GTPase
APY30_08660	PF13167	APY30_08660
APY30_08660	PF16360	APY30_08660
APY30_08665	PF02464	Competence-damaged protein
APY30_08670	PF03109	APY30_08670
APY30_08675	PF00717	Peptidase S24-like
APY30_08675	PF01726	LexA DNA binding domain
APY30_08680	PF00154	recA bacterial DNA recombination protein
APY30_08685	PF02631	RecX family
APY30_08690	PF01411	tRNA synthetases class II (A)
APY30_08690	PF02272	DHHA1 domain
APY30_08690	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
APY30_08695	PF02599	Global regulator protein family
APY30_08705	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
APY30_08705	PF08447	PAS fold
APY30_08710	PF02678	Pirin
APY30_08720	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
APY30_08720	PF03466	LysR substrate binding domain
APY30_08725	PF00581	Rhodanese-like domain
APY30_08725	PF09335	APY30_08725
APY30_08740	PF12146	Putative lysophospholipase
APY30_08745	PF08543	Phosphomethylpyrimidine kinase
APY30_08750	PF06912	APY30_08750
APY30_08760	PF02562	PhoH-like protein
APY30_08760	PF13638	PIN domain
APY30_08765	PF00578	AhpC/TSA family
APY30_08770	PF06877	Regulator of ribonuclease activity B
APY30_08775	PF13740	ACT domain
APY30_08780	PF00701	Dihydrodipicolinate synthetase family
APY30_08790	PF00037	4Fe-4S binding domain
APY30_08790	PF11953	Domain of unknown function (DUF3470)
APY30_08795	PF05035	2-keto-3-deoxy-galactonokinase
APY30_08800	PF08450	SMP-30/Gluconolaconase/LRE-like region
APY30_08805	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
APY30_08805	PF13378	Enolase C-terminal domain-like
APY30_08810	PF01081	KDPG and KHG aldolase
APY30_08825	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
APY30_08825	PF03466	LysR substrate binding domain
APY30_08835	PF00593	TonB dependent receptor
APY30_08835	PF07715	TonB-dependent Receptor Plug Domain
APY30_08845	PF03629	Domain of unknown function (DUF303)
APY30_08845	PF13364	Beta-galactosidase jelly roll domain
APY30_08850	PF02449	Beta-galactosidase
APY30_08855	PF01055	Glycosyl hydrolases family 31
APY30_08855	PF07691	PA14 domain
APY30_08855	PF16338	APY30_08855
APY30_08855	PF17137	APY30_08855
APY30_08860	PF14498	Glycosyl hydrolase family 65, N-terminal domain
APY30_08865	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
APY30_08865	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
APY30_08875	PF00083	Sugar (and other) transporter
APY30_08880	PF05231	APY30_08880
APY30_08890	PF01520	N-acetylmuramoyl-L-alanine amidase
APY30_08890	PF11741	AMIN domain
APY30_08895	PF02649	Type I GTP cyclohydrolase folE2
APY30_08905	PF01743	Poly A polymerase head domain
APY30_08905	PF12626	Polymerase A arginine-rich C-terminus
APY30_08905	PF12627	Probable RNA and SrmB- binding site of polymerase A
APY30_08910	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
APY30_08915	PF02548	Ketopantoate hydroxymethyltransferase
APY30_08920	PF02569	Pantoate-beta-alanine ligase
APY30_08925	PF02261	Aspartate decarboxylase
APY30_08930	PF00342	Phosphoglucose isomerase
APY30_08935	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
APY30_08945	PF05787	Bacterial protein of unknown function (DUF839)
APY30_08950	PF00933	Glycosyl hydrolase family 3 N terminal domain
APY30_08950	PF01915	Glycosyl hydrolase family 3 C-terminal domain
APY30_08955	PF00474	Sodium:solute symporter family
APY30_08960	PF00563	EAL domain
APY30_08960	PF00990	GGDEF domain
APY30_08960	PF01590	GAF domain
APY30_08965	PF00150	Cellulase (glycosyl hydrolase family 5)
APY30_08970	PF00072	Response regulator receiver domain
APY30_08970	PF02954	Bacterial regulatory protein, Fis family
APY30_08975	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_08980	PF04551	GcpE protein
APY30_08985	PF01569	PAP2 superfamily
APY30_08990	PF07690	Major Facilitator Superfamily
APY30_08995	PF01177	Asp/Glu/Hydantoin racemase
APY30_09000	PF00892	EamA-like transporter family
APY30_09005	PF01565	FAD binding domain
APY30_09005	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
APY30_09010	PF01180	Dihydroorotate dehydrogenase
APY30_09015	PF08241	Methyltransferase domain
APY30_09020	PF13828	APY30_09020
APY30_09025	PF00171	Aldehyde dehydrogenase family
APY30_09035	PF13994	APY30_09035
APY30_09040	PF13641	Glycosyltransferase like family 2
APY30_09045	PF01522	Polysaccharide deacetylase
APY30_09045	PF14883	Hypothetical glycosyl hydrolase family 13
APY30_09050	PF13432	Tetratricopeptide repeat
APY30_09050	PF14559	Tetratricopeptide repeat
APY30_09055	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
APY30_09055	PF08479	POTRA domain, ShlB-type
APY30_09055	PF17287	APY30_09055
APY30_09065	PF01527	Transposase
APY30_09070	PF00665	Integrase core domain
APY30_09075	PF00696	Amino acid kinase family
APY30_09075	PF00742	Homoserine dehydrogenase
APY30_09075	PF03447	Homoserine dehydrogenase, NAD binding domain
APY30_09075	PF13840	ACT domain
APY30_09080	PF00288	GHMP kinases N terminal domain
APY30_09080	PF08544	GHMP kinases C terminal
APY30_09085	PF07110	EthD domain
APY30_09090	PF00291	Pyridoxal-phosphate dependent enzyme
APY30_09090	PF14821	Threonine synthase N terminus
APY30_09095	PF13645	APY30_09095
APY30_09100	PF00027	Cyclic nucleotide-binding domain
APY30_09100	PF13545	Crp-like helix-turn-helix domain
APY30_09105	PF03129	Anticodon binding domain
APY30_09105	PF13393	Histidyl-tRNA synthetase
APY30_09110	PF01371	Trp repressor protein
APY30_09115	PF01634	ATP phosphoribosyltransferase
APY30_09115	PF08029	HisG, C-terminal domain
APY30_09120	PF00815	Histidinol dehydrogenase
APY30_09125	PF00155	Aminotransferase class I and II
APY30_09130	PF00475	Imidazoleglycerol-phosphate dehydratase
APY30_09130	PF13242	HAD-hyrolase-like
APY30_09135	PF00117	Glutamine amidotransferase class-I
APY30_09140	PF00977	Histidine biosynthesis protein
APY30_09145	PF00977	Histidine biosynthesis protein
APY30_09150	PF01502	Phosphoribosyl-AMP cyclohydrolase
APY30_09150	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
APY30_09155	PF00149	Calcineurin-like phosphoesterase
APY30_09155	PF16370	APY30_09155
APY30_09155	PF16371	APY30_09155
APY30_09160	PF01650	Peptidase C13 family
APY30_09170	PF03079	ARD/ARD' family
APY30_09175	PF00596	Class II Aldolase and Adducin N-terminal domain
APY30_09180	PF13520	Amino acid permease
APY30_09185	PF13520	Amino acid permease
APY30_09190	PF00293	NUDIX domain
APY30_09195	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
APY30_09195	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
APY30_09200	PF01565	FAD binding domain
APY30_09200	PF02913	FAD linked oxidases, C-terminal domain
APY30_09205	PF09498	APY30_09205
APY30_09210	PF13387	APY30_09210
APY30_09220	PF01132	Elongation factor P (EF-P) OB domain
APY30_09220	PF08207	Elongation factor P (EF-P) KOW-like domain
APY30_09220	PF09285	Elongation factor P, C-terminal
APY30_09225	PF00106	short chain dehydrogenase
APY30_09230	PF00682	HMGL-like
APY30_09235	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
APY30_09240	PF00378	Enoyl-CoA hydratase/isomerase family
APY30_09245	PF04023	FeoA domain
APY30_09250	PF02421	Ferrous iron transport protein B
APY30_09250	PF07664	APY30_09250
APY30_09250	PF07670	Nucleoside recognition
APY30_09265	PF00155	Aminotransferase class I and II
APY30_09270	PF03473	MOSC domain
APY30_09270	PF03475	3-alpha domain
APY30_09275	PF01113	Dihydrodipicolinate reductase, N-terminus
APY30_09275	PF05173	Dihydrodipicolinate reductase, C-terminus
APY30_09280	PF00117	Glutamine amidotransferase class-I
APY30_09280	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
APY30_09290	PF02142	MGS-like domain
APY30_09290	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
APY30_09290	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
APY30_09295	PF01272	Transcription elongation factor, GreA/GreB, C-term
APY30_09295	PF03449	Transcription elongation factor, N-terminal
APY30_09305	PF01368	DHH family
APY30_09305	PF02272	DHHA1 domain
APY30_09320	PF15649	APY30_09320
APY30_09340	PF01527	Transposase
APY30_09345	PF13276	APY30_09345
APY30_09345	PF13683	APY30_09345
APY30_09350	PF04397	LytTr DNA-binding domain
APY30_09355	PF00472	RF-1 domain
APY30_09355	PF03462	PCRF domain
APY30_09360	PF00152	tRNA synthetases class II (D, K and N)
APY30_09360	PF01336	OB-fold nucleic acid binding domain
APY30_09365	PF00072	Response regulator receiver domain
APY30_09365	PF01966	HD domain
APY30_09370	PF00072	Response regulator receiver domain
APY30_09370	PF00512	His Kinase A (phospho-acceptor) domain
APY30_09370	PF01627	Hpt domain
APY30_09370	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_09375	PF00378	Enoyl-CoA hydratase/isomerase family
APY30_09380	PF00501	AMP-binding enzyme
APY30_09380	PF13193	AMP-binding enzyme C-terminal domain
APY30_09390	PF00330	Aconitase family (aconitate hydratase)
APY30_09390	PF00694	Aconitase C-terminal domain
APY30_09395	PF04014	Antidote-toxin recognition MazE
APY30_09400	PF01850	PIN domain
APY30_09405	PF00330	Aconitase family (aconitate hydratase)
APY30_09405	PF06434	Aconitate hydratase 2 N-terminus
APY30_09405	PF11791	Aconitate B N-terminal domain
APY30_09410	PF00561	alpha/beta hydrolase fold
APY30_09415	PF00563	EAL domain
APY30_09415	PF00990	GGDEF domain
APY30_09415	PF13185	GAF domain
APY30_09415	PF13426	PAS domain
APY30_09420	PF00072	Response regulator receiver domain
APY30_09420	PF01339	CheB methylesterase
APY30_09425	PF03975	CheD chemotactic sensory transduction
APY30_09430	PF01739	CheR methyltransferase, SAM binding domain
APY30_09430	PF03705	CheR methyltransferase, all-alpha domain
APY30_09435	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
APY30_09435	PF00672	HAMP domain
APY30_09435	PF12729	APY30_09435
APY30_09445	PF01584	CheW-like domain
APY30_09450	PF07238	PilZ domain
APY30_09450	PF07317	Flagellar regulator YcgR
APY30_09455	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
APY30_09455	PF17201	APY30_09455
APY30_09460	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
APY30_09460	PF00672	HAMP domain
APY30_09460	PF12729	APY30_09460
APY30_09465	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
APY30_09465	PF00672	HAMP domain
APY30_09465	PF12729	APY30_09465
APY30_09470	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
APY30_09470	PF00672	HAMP domain
APY30_09480	PF01527	Transposase
APY30_09485	PF00665	Integrase core domain
APY30_09495	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
APY30_09495	PF00672	HAMP domain
APY30_09495	PF12729	APY30_09495
APY30_09500	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
APY30_09500	PF12729	APY30_09500
APY30_09505	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
APY30_09510	PF13557	APY30_09510
APY30_09515	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
APY30_09515	PF00672	HAMP domain
APY30_09515	PF02743	Cache domain
APY30_09520	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
APY30_09520	PF17200	APY30_09520
APY30_09530	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
APY30_09530	PF00672	HAMP domain
APY30_09530	PF12729	APY30_09530
APY30_09535	PF01584	CheW-like domain
APY30_09535	PF01627	Hpt domain
APY30_09535	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_09535	PF02895	Signal transducing histidine kinase, homodimeric domain
APY30_09540	PF00072	Response regulator receiver domain
APY30_09545	PF13466	STAS domain
APY30_09550	PF01584	CheW-like domain
APY30_09555	PF13614	AAA domain
APY30_09560	PF00691	OmpA family
APY30_09560	PF13677	APY30_09560
APY30_09565	PF01618	APY30_09565
APY30_09570	PF00593	TonB dependent receptor
APY30_09570	PF07715	TonB-dependent Receptor Plug Domain
APY30_09575	PF00593	TonB dependent receptor
APY30_09580	PF13276	APY30_09580
APY30_09580	PF13683	APY30_09580
APY30_09590	PF01527	Transposase
APY30_09595	PF00665	Integrase core domain
APY30_09600	PF01527	Transposase
APY30_09605	PF00665	Integrase core domain
APY30_09625	PF13276	APY30_09625
APY30_09625	PF13683	APY30_09625
APY30_09630	PF01527	Transposase
APY30_09635	PF00665	Integrase core domain
APY30_09635	PF13276	APY30_09635
APY30_09640	PF01527	Transposase
APY30_09650	PF01584	CheW-like domain
APY30_09650	PF01627	Hpt domain
APY30_09650	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_09650	PF02895	Signal transducing histidine kinase, homodimeric domain
APY30_09655	PF04344	Chemotaxis phosphatase, CheZ
APY30_09660	PF00072	Response regulator receiver domain
APY30_09670	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
APY30_09675	PF00448	SRP54-type protein, GTPase domain
APY30_09680	PF00771	FHIPEP family
APY30_09685	PF01312	FlhB HrpN YscU SpaS Family
APY30_09690	PF00563	EAL domain
APY30_09690	PF00990	GGDEF domain
APY30_09690	PF03707	APY30_09690
APY30_09695	PF00990	GGDEF domain
APY30_09705	PF00990	GGDEF domain
APY30_09705	PF07494	Two component regulator propeller
APY30_09705	PF07495	Y_Y_Y domain
APY30_09710	PF01311	APY30_09710
APY30_09715	PF01313	APY30_09715
APY30_09720	PF00813	APY30_09720
APY30_09725	PF04347	APY30_09725
APY30_09730	PF01052	Surface presentation of antigens (SPOA)
APY30_09735	PF01052	Surface presentation of antigens (SPOA)
APY30_09735	PF02154	Flagellar motor switch protein FliM
APY30_09740	PF03748	APY30_09740
APY30_09745	PF02120	Flagellar hook-length control protein FliK
APY30_09750	PF02050	Flagellar FliJ protein
APY30_09755	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
APY30_09760	PF02108	APY30_09760
APY30_09765	PF01706	FliG C-terminal domain
APY30_09765	PF14841	FliG middle domain
APY30_09765	PF14842	FliG N-terminal domain
APY30_09770	PF01514	Secretory protein of YscJ/FliF family
APY30_09770	PF08345	APY30_09770
APY30_09775	PF02049	APY30_09775
APY30_09780	PF00535	Glycosyl transferase family 2
APY30_09785	PF13276	APY30_09785
APY30_09785	PF13683	APY30_09785
APY30_09795	PF00665	Integrase core domain
APY30_09800	PF01527	Transposase
APY30_09810	PF00132	Bacterial transferase hexapeptide (six repeats)
APY30_09815	PF00355	Rieske [2Fe-2S] domain
APY30_09815	PF00848	Ring hydroxylating alpha subunit (catalytic domain)
APY30_09820	PF00132	Bacterial transferase hexapeptide (six repeats)
APY30_09825	PF13561	Enoyl-(Acyl carrier protein) reductase
APY30_09830	PF13561	Enoyl-(Acyl carrier protein) reductase
APY30_09835	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
APY30_09835	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
APY30_09845	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
APY30_09850	PF00158	Sigma-54 interaction domain
APY30_09850	PF02954	Bacterial regulatory protein, Fis family
APY30_09850	PF06490	APY30_09850
APY30_09855	PF00072	Response regulator receiver domain
APY30_09860	PF00309	APY30_09860
APY30_09860	PF04552	Sigma-54, DNA binding domain
APY30_09860	PF04963	Sigma-54 factor, core binding domain
APY30_09865	PF00072	Response regulator receiver domain
APY30_09865	PF00196	Bacterial regulatory proteins, luxR family
APY30_09870	PF16823	APY30_09870
APY30_09880	PF02561	Flagellar protein FliS
APY30_09885	PF02465	APY30_09885
APY30_09885	PF07195	APY30_09885
APY30_09885	PF07196	Flagellin hook IN motif
APY30_09890	PF00669	Bacterial flagellin N-terminal helical region
APY30_09890	PF00700	Bacterial flagellin C-terminal helical region
APY30_09890	PF07196	Flagellin hook IN motif
APY30_09895	PF00669	Bacterial flagellin N-terminal helical region
APY30_09895	PF00700	Bacterial flagellin C-terminal helical region
APY30_09900	PF00460	Flagella basal body rod protein
APY30_09900	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
APY30_09905	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
APY30_09905	PF10135	APY30_09905
APY30_09910	PF02119	APY30_09910
APY30_09915	PF02107	APY30_09915
APY30_09920	PF00460	Flagella basal body rod protein
APY30_09920	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
APY30_09925	PF00460	Flagella basal body rod protein
APY30_09925	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
APY30_09930	PF00460	Flagella basal body rod protein
APY30_09930	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
APY30_09930	PF07559	Flagellar basal body protein FlaE
APY30_09935	PF03963	APY30_09935
APY30_09935	PF13860	FlgD Ig-like domain
APY30_09935	PF13861	FlgD Tudor-like domain
APY30_09940	PF00460	Flagella basal body rod protein
APY30_09940	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
APY30_09945	PF00460	Flagella basal body rod protein
APY30_09950	PF00072	Response regulator receiver domain
APY30_09950	PF01584	CheW-like domain
APY30_09955	PF13144	SAF-like
APY30_09960	PF04316	Anti-sigma-28 factor, FlgM
APY30_09970	PF00512	His Kinase A (phospho-acceptor) domain
APY30_09970	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_09975	PF00072	Response regulator receiver domain
APY30_09975	PF00563	EAL domain
APY30_09975	PF00990	GGDEF domain
APY30_09980	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_09980	PF07730	Histidine kinase
APY30_09980	PF08448	PAS fold
APY30_09980	PF13426	PAS domain
APY30_09985	PF00563	EAL domain
APY30_09985	PF00990	GGDEF domain
APY30_09985	PF08447	PAS fold
APY30_09985	PF13426	PAS domain
APY30_09995	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
APY30_10000	PF04356	Protein of unknown function (DUF489)
APY30_10005	PF03054	tRNA methyl transferase
APY30_10010	PF00293	NUDIX domain
APY30_10015	PF02617	ATP-dependent Clp protease adaptor protein ClpS
APY30_10020	PF00004	ATPase family associated with various cellular activities (AAA)
APY30_10020	PF02861	Clp amino terminal domain
APY30_10020	PF07724	AAA domain (Cdc48 subfamily)
APY30_10020	PF10431	C-terminal, D2-small domain, of ClpB protein
APY30_10025	PF01176	Translation initiation factor 1A / IF-1
APY30_10030	PF03588	Leucyl/phenylalanyl-tRNA protein transferase
APY30_10035	PF04339	APY30_10035
APY30_10040	PF07992	Pyridine nucleotide-disulphide oxidoreductase
APY30_10045	PF01580	FtsK/SpoIIIE family
APY30_10045	PF09397	Ftsk gamma domain
APY30_10045	PF13491	APY30_10045
APY30_10050	PF01841	Transglutaminase-like superfamily
APY30_10050	PF12969	Domain of Unknown Function with PDB structure (DUF3857)
APY30_10055	PF03548	Outer membrane lipoprotein carrier protein LolA
APY30_10065	PF00004	ATPase family associated with various cellular activities (AAA)
APY30_10065	PF12002	MgsA AAA+ ATPase C terminal
APY30_10065	PF16193	APY30_10065
APY30_10070	PF02537	APY30_10070
APY30_10075	PF00108	Thiolase, N-terminal domain
APY30_10075	PF02803	Thiolase, C-terminal domain
APY30_10080	PF00378	Enoyl-CoA hydratase/isomerase family
APY30_10080	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
APY30_10080	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
APY30_10085	PF00440	Bacterial regulatory proteins, tetR family
APY30_10090	PF00334	Nucleoside diphosphate kinase
APY30_10095	PF04055	Radical SAM superfamily
APY30_10100	PF13432	Tetratricopeptide repeat
APY30_10105	PF13413	Helix-turn-helix domain
APY30_10105	PF13464	APY30_10105
APY30_10110	PF09976	Tetratricopeptide repeat
APY30_10115	PF13360	PQQ-like domain
APY30_10120	PF01926	50S ribosome-binding GTPase
APY30_10120	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
APY30_10125	PF00994	Probable molybdopterin binding domain
APY30_10125	PF03453	MoeA N-terminal region (domain I and II)
APY30_10125	PF03454	MoeA C-terminal region (domain IV)
APY30_10130	PF00581	Rhodanese-like domain
APY30_10130	PF00899	ThiF family
APY30_10140	PF01527	Transposase
APY30_10145	PF00665	Integrase core domain
APY30_10150	PF00593	TonB dependent receptor
APY30_10160	PF13628	APY30_10160
APY30_10170	PF00107	Zinc-binding dehydrogenase
APY30_10170	PF08240	Alcohol dehydrogenase GroES-like domain
APY30_10170	PF13823	Alcohol dehydrogenase GroES-associated
APY30_10190	PF05717	APY30_10190
APY30_10195	PF13007	APY30_10195
APY30_10200	PF00665	Integrase core domain
APY30_10205	PF01527	Transposase
APY30_10215	PF12183	Restriction endonuclease NotI
APY30_10220	PF00145	C-5 cytosine-specific DNA methylase
APY30_10240	PF13166	APY30_10240
APY30_10245	PF01527	Transposase
APY30_10250	PF00665	Integrase core domain
APY30_10255	PF13166	APY30_10255
APY30_10260	PF09571	APY30_10260
APY30_10265	PF01555	DNA methylase
APY30_10270	PF00239	Resolvase, N terminal domain
APY30_10275	PF00156	Phosphoribosyl transferase domain
APY30_10290	PF00665	Integrase core domain
APY30_10290	PF13276	APY30_10290
APY30_10295	PF01527	Transposase
APY30_10300	PF03377	Xanthomonas avirulence protein, Avr/PthA
APY30_10305	PF04014	Antidote-toxin recognition MazE
APY30_10310	PF01850	PIN domain
APY30_10320	PF06414	Zeta toxin
APY30_10325	PF04796	APY30_10325
APY30_10330	PF01527	Transposase
APY30_10335	PF00665	Integrase core domain
APY30_10345	PF01526	APY30_10345
APY30_10345	PF13700	APY30_10345
APY30_10355	PF11740	APY30_10355
APY30_10360	PF13007	APY30_10360
APY30_10365	PF05717	APY30_10365
APY30_10380	PF00665	Integrase core domain
APY30_10385	PF06627	Protein of unknown function (DUF1153)
APY30_10400	PF13276	APY30_10400
APY30_10400	PF13683	APY30_10400
APY30_10405	PF01527	Transposase
APY30_10415	PF12760	Transposase zinc-ribbon domain
APY30_10415	PF12762	APY30_10415
APY30_10420	PF00665	Integrase core domain
APY30_10420	PF13276	APY30_10420
APY30_10425	PF01527	Transposase
APY30_10430	PF00665	Integrase core domain
APY30_10430	PF13276	APY30_10430
APY30_10435	PF03377	Xanthomonas avirulence protein, Avr/PthA
APY30_10445	PF03372	Endonuclease/Exonuclease/phosphatase family
APY30_10450	PF04193	PQ loop repeat
APY30_10455	PF00994	Probable molybdopterin binding domain
APY30_10455	PF03453	MoeA N-terminal region (domain I and II)
APY30_10455	PF03454	MoeA C-terminal region (domain IV)
APY30_10460	PF12804	MobA-like NTP transferase domain
APY30_10470	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
APY30_10470	PF10414	Sirohaem synthase dimerisation region
APY30_10470	PF13241	Putative NAD(P)-binding
APY30_10470	PF14824	Sirohaem biosynthesis protein central
APY30_10480	PF10685	APY30_10480
APY30_10490	PF05974	Domain of unknown function (DUF892)
APY30_10495	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
APY30_10500	PF07081	Protein of unknown function (DUF1349)
APY30_10505	PF00563	EAL domain
APY30_10510	PF12951	APY30_10510
APY30_10510	PF13018	APY30_10510
APY30_10515	PF00072	Response regulator receiver domain
APY30_10515	PF00196	Bacterial regulatory proteins, luxR family
APY30_10520	PF00512	His Kinase A (phospho-acceptor) domain
APY30_10520	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_10525	PF02321	Outer membrane efflux protein
APY30_10530	PF00873	AcrB/AcrD/AcrF family
APY30_10535	PF16576	APY30_10535
APY30_10540	PF00082	Subtilase family
APY30_10540	PF03797	Autotransporter beta-domain
APY30_10540	PF12951	APY30_10540
APY30_10555	PF06580	APY30_10555
APY30_10560	PF00072	Response regulator receiver domain
APY30_10560	PF04397	LytTr DNA-binding domain
APY30_10565	PF00144	Beta-lactamase
APY30_10575	PF07995	Glucose / Sorbosone dehydrogenase
APY30_10580	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
APY30_10590	PF09335	APY30_10590
APY30_10600	PF01527	Transposase
APY30_10605	PF00665	Integrase core domain
APY30_10635	PF01106	NifU-like domain
APY30_10640	PF01329	Pterin 4 alpha carbinolamine dehydratase
APY30_10645	PF03544	Gram-negative bacterial TonB protein C-terminal
APY30_10650	PF02535	APY30_10650
APY30_10655	PF11737	APY30_10655
APY30_10660	PF00849	RNA pseudouridylate synthase
APY30_10660	PF01479	S4 domain
APY30_10665	PF00575	S1 RNA binding domain
APY30_10665	PF10150	Ribonuclease E/G family
APY30_10670	PF00072	Response regulator receiver domain
APY30_10670	PF00196	Bacterial regulatory proteins, luxR family
APY30_10675	PF00581	Rhodanese-like domain
APY30_10685	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
APY30_10690	PF03486	HI0933-like protein
APY30_10695	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
APY30_10695	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
APY30_10695	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
APY30_10705	PF01648	4'-phosphopantetheinyl transferase superfamily
APY30_10710	PF00501	AMP-binding enzyme
APY30_10710	PF00550	Phosphopantetheine attachment site
APY30_10710	PF00668	Condensation domain
APY30_10710	PF00975	Thioesterase domain
APY30_10710	PF13193	AMP-binding enzyme C-terminal domain
APY30_10715	PF01527	Transposase
APY30_10720	PF00665	Integrase core domain
APY30_10745	PF12101	APY30_10745
APY30_10750	PF13091	PLD-like domain
APY30_10755	PF09369	APY30_10755
APY30_10760	PF00271	Helicase conserved C-terminal domain
APY30_10770	PF00176	SNF2 family N-terminal domain
APY30_10770	PF00271	Helicase conserved C-terminal domain
APY30_10775	PF00145	C-5 cytosine-specific DNA methylase
APY30_10790	PF05930	Prophage CP4-57 regulatory protein (AlpA)
APY30_10795	PF13614	AAA domain
APY30_10805	PF02195	ParB-like nuclease domain
APY30_10810	PF11198	APY30_10810
APY30_10820	PF08900	APY30_10820
APY30_10825	PF11358	APY30_10825
APY30_10830	PF00436	Single-strand binding protein family
APY30_10835	PF01131	DNA topoisomerase
APY30_10835	PF01396	APY30_10835
APY30_10835	PF01751	Toprim domain
APY30_10840	PF00145	C-5 cytosine-specific DNA methylase
APY30_10860	PF11284	APY30_10860
APY30_10870	PF16219	APY30_10870
APY30_10895	PF11284	APY30_10895
APY30_10905	PF13936	Helix-turn-helix domain
APY30_10910	PF12101	APY30_10910
APY30_10915	PF11679	APY30_10915
APY30_10940	PF00271	Helicase conserved C-terminal domain
APY30_10965	PF11072	APY30_10965
APY30_10970	PF12696	TraM recognition site of TraD and TraG
APY30_10975	PF14348	APY30_10975
APY30_10980	PF09686	APY30_10980
APY30_10985	PF11660	APY30_10985
APY30_10990	PF11190	APY30_10990
APY30_10995	PF11990	APY30_10995
APY30_11000	PF11444	APY30_11000
APY30_11005	PF11920	APY30_11005
APY30_11020	PF11130	APY30_11020
APY30_11025	PF13462	Thioredoxin
APY30_11030	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
APY30_11030	PF03466	LysR substrate binding domain
APY30_11035	PF07690	Major Facilitator Superfamily
APY30_11040	PF12760	Transposase zinc-ribbon domain
APY30_11040	PF12762	APY30_11040
APY30_11050	PF07511	APY30_11050
APY30_11055	PF06834	APY30_11055
APY30_11070	PF07916	APY30_11070
APY30_11075	PF12553	APY30_11075
APY30_11080	PF08808	APY30_11080
APY30_11090	PF07514	Putative helicase
APY30_11090	PF07515	Protein of unknown function (DUF1528)
APY30_11100	PF01764	Lipase (class 3)
APY30_11105	PF01527	Transposase
APY30_11110	PF00665	Integrase core domain
APY30_11120	PF04610	APY30_11120
APY30_11130	PF05231	APY30_11130
APY30_11140	PF13175	AAA ATPase domain
APY30_11145	PF00580	UvrD/REP helicase N-terminal domain
APY30_11145	PF13361	UvrD-like helicase C-terminal domain
APY30_11155	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
APY30_11155	PF03466	LysR substrate binding domain
APY30_11160	PF00589	Phage integrase family
APY30_11160	PF13356	Domain of unknown function (DUF4102)
APY30_11180	PF01066	CDP-alcohol phosphatidyltransferase
APY30_11185	PF01541	GIY-YIG catalytic domain
APY30_11185	PF02151	UvrB/uvrC motif
APY30_11185	PF08459	UvrC Helix-hairpin-helix N-terminal
APY30_11190	PF01436	NHL repeat
APY30_11195	PF01451	Low molecular weight phosphotyrosine protein phosphatase
APY30_11200	PF02348	Cytidylyltransferase
APY30_11205	PF02606	Tetraacyldisaccharide-1-P 4'-kinase
APY30_11210	PF00005	ABC transporter
APY30_11210	PF00664	ABC transporter transmembrane region
APY30_11215	PF02472	Biopolymer transport protein ExbD/TolR
APY30_11220	PF01618	APY30_11220
APY30_11225	PF00753	Metallo-beta-lactamase superfamily
APY30_11225	PF03772	APY30_11225
APY30_11225	PF13567	APY30_11225
APY30_11230	PF01370	NAD dependent epimerase/dehydratase family
APY30_11235	PF00005	ABC transporter
APY30_11240	PF02687	APY30_11240
APY30_11240	PF12704	MacB-like periplasmic core domain
APY30_11250	PF03937	Flavinator of succinate dehydrogenase
APY30_11255	PF13085	2Fe-2S iron-sulfur cluster binding domain
APY30_11255	PF13534	4Fe-4S dicluster domain
APY30_11265	PF00890	FAD binding domain
APY30_11265	PF02910	Fumarate reductase flavoprotein C-term
APY30_11270	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
APY30_11275	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
APY30_11280	PF01571	Aminomethyltransferase folate-binding domain
APY30_11280	PF08669	Glycine cleavage T-protein C-terminal barrel domain
APY30_11285	PF00005	ABC transporter
APY30_11285	PF08402	TOBE domain
APY30_11290	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
APY30_11290	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
APY30_11295	PF02685	Glucokinase
APY30_11300	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
APY30_11305	PF00920	Dehydratase family
APY30_11310	PF01081	KDPG and KHG aldolase
APY30_11315	PF00873	AcrB/AcrD/AcrF family
APY30_11320	PF01527	Transposase
APY30_11325	PF13276	APY30_11325
APY30_11325	PF13683	APY30_11325
APY30_11335	PF00873	AcrB/AcrD/AcrF family
APY30_11340	PF00529	HlyD family secretion protein
APY30_11340	PF16576	APY30_11340
APY30_11345	PF00034	Cytochrome c
APY30_11350	PF00034	Cytochrome c
APY30_11390	PF00072	Response regulator receiver domain
APY30_11390	PF00512	His Kinase A (phospho-acceptor) domain
APY30_11390	PF01590	GAF domain
APY30_11390	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_11390	PF08447	PAS fold
APY30_11390	PF08448	PAS fold
APY30_11390	PF13185	GAF domain
APY30_11395	PF00575	S1 RNA binding domain
APY30_11395	PF09371	Tex-like protein N-terminal domain
APY30_11395	PF12836	Helix-hairpin-helix motif
APY30_11395	PF16921	APY30_11395
APY30_11405	PF01266	FAD dependent oxidoreductase
APY30_11415	PF04024	APY30_11415
APY30_11420	PF00561	alpha/beta hydrolase fold
APY30_11425	PF09712	APY30_11425
APY30_11430	PF01066	CDP-alcohol phosphatidyltransferase
APY30_11435	PF13561	Enoyl-(Acyl carrier protein) reductase
APY30_11440	PF00293	NUDIX domain
APY30_11445	PF06853	APY30_11445
APY30_11450	PF03618	APY30_11450
APY30_11455	PF00391	PEP-utilising enzyme, mobile domain
APY30_11455	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
APY30_11455	PF02896	PEP-utilising enzyme, TIM barrel domain
APY30_11460	PF00924	Mechanosensitive ion channel
APY30_11465	PF07969	Amidohydrolase family
APY30_11470	PF05977	Transmembrane secretion effector
APY30_11485	PF00561	alpha/beta hydrolase fold
APY30_11490	PF01566	APY30_11490
APY30_11495	PF01325	Iron dependent repressor, N-terminal DNA binding domain
APY30_11495	PF02742	Iron dependent repressor, metal binding and dimerisation domain
APY30_11500	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
APY30_11505	PF00929	Exonuclease
APY30_11510	PF07681	APY30_11510
APY30_11515	PF00857	Isochorismatase family
APY30_11520	PF12833	Helix-turn-helix domain
APY30_11530	PF00072	Response regulator receiver domain
APY30_11530	PF00196	Bacterial regulatory proteins, luxR family
APY30_11535	PF17201	APY30_11535
APY30_11550	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
APY30_11550	PF03466	LysR substrate binding domain
APY30_11555	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
APY30_11555	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
APY30_11560	PF10070	APY30_11560
APY30_11570	PF03743	Bacterial conjugation TrbI-like protein
APY30_11575	PF03524	Conjugal transfer protein
APY30_11585	PF04610	APY30_11585
APY30_11600	PF03135	APY30_11600
APY30_11605	PF05101	APY30_11605
APY30_11610	PF04956	APY30_11610
APY30_11615	PF00437	Type II/IV secretion system protein
APY30_11625	PF02534	Type IV secretory system Conjugative DNA transfer
APY30_11630	PF00665	Integrase core domain
APY30_11630	PF13276	APY30_11630
APY30_11635	PF01527	Transposase
APY30_11640	PF00440	Bacterial regulatory proteins, tetR family
APY30_11640	PF14246	AefR-like transcriptional repressor, C-terminal region
APY30_11645	PF06500	Alpha/beta hydrolase of unknown function (DUF1100)
APY30_11650	PF00248	Aldo/keto reductase family
APY30_11655	PF12146	Putative lysophospholipase
APY30_11660	PF00107	Zinc-binding dehydrogenase
APY30_11660	PF08240	Alcohol dehydrogenase GroES-like domain
APY30_11665	PF04307	APY30_11665
APY30_11670	PF01527	Transposase
APY30_11675	PF00665	Integrase core domain
APY30_11680	PF07511	APY30_11680
APY30_11685	PF06834	APY30_11685
APY30_11700	PF00589	Phage integrase family
APY30_11700	PF13356	Domain of unknown function (DUF4102)
APY30_11705	PF00117	Glutamine amidotransferase class-I
APY30_11705	PF00958	GMP synthase C terminal domain
APY30_11705	PF02540	NAD synthase
APY30_11710	PF00478	IMP dehydrogenase / GMP reductase domain
APY30_11710	PF00571	CBS domain
APY30_11715	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
APY30_11715	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
APY30_11720	PF06844	Protein of unknown function (DUF1244)
APY30_11725	PF00999	Sodium/hydrogen exchanger family
APY30_11725	PF02254	TrkA-N domain
APY30_11730	PF00483	Nucleotidyl transferase
APY30_11735	PF02719	Polysaccharide biosynthesis protein
APY30_11735	PF13727	CoA-binding domain
APY30_11740	PF00953	Glycosyl transferase family 4
APY30_11745	PF13432	Tetratricopeptide repeat
APY30_11750	PF06305	APY30_11750
APY30_11755	PF00216	Bacterial DNA-binding protein
APY30_11760	PF00575	S1 RNA binding domain
APY30_11765	PF02224	Cytidylate kinase
APY30_11770	PF00444	Ribosomal protein L36
APY30_11780	PF04371	Porphyromonas-type peptidyl-arginine deiminase
APY30_11785	PF00795	Carbon-nitrogen hydrolase
APY30_11795	PF01963	APY30_11795
APY30_11800	PF03372	Endonuclease/Exonuclease/phosphatase family
APY30_11805	PF00754	F5/8 type C domain
APY30_11805	PF06202	Amylo-alpha-1,6-glucosidase
APY30_11810	PF00528	Binding-protein-dependent transport system inner membrane component
APY30_11815	PF00528	Binding-protein-dependent transport system inner membrane component
APY30_11820	PF13416	Bacterial extracellular solute-binding protein
APY30_11825	PF10091	Putative glucoamylase
APY30_11830	PF00593	TonB dependent receptor
APY30_11830	PF13620	Carboxypeptidase regulatory-like domain
APY30_11835	PF00356	Bacterial regulatory proteins, lacI family
APY30_11835	PF13377	Periplasmic binding protein-like domain
APY30_11840	PF01722	BolA-like protein
APY30_11845	PF03795	YCII-related domain
APY30_11850	PF02616	ScpA/B protein
APY30_11855	PF04079	Putative transcriptional regulators (Ypuh-like)
APY30_11860	PF00849	RNA pseudouridylate synthase
APY30_11860	PF01479	S4 domain
APY30_11870	PF05096	Glutamine cyclotransferase
APY30_11875	PF00795	Carbon-nitrogen hydrolase
APY30_11880	PF00155	Aminotransferase class I and II
APY30_11885	PF00005	ABC transporter
APY30_11890	PF03379	APY30_11890
APY30_11895	PF01578	APY30_11895
APY30_11900	PF04995	APY30_11900
APY30_11905	PF03100	CcmE
APY30_11910	PF01578	APY30_11910
APY30_11910	PF16327	APY30_11910
APY30_11915	PF08534	Redoxin
APY30_11920	PF03918	Cytochrome C biogenesis protein
APY30_11925	PF13432	Tetratricopeptide repeat
APY30_11930	PF00561	alpha/beta hydrolase fold
APY30_11935	PF00313	'Cold-shock' DNA-binding domain
APY30_11935	PF06961	APY30_11935
APY30_11940	PF00005	ABC transporter
APY30_11940	PF00664	ABC transporter transmembrane region
APY30_11945	PF00005	ABC transporter
APY30_11945	PF00664	ABC transporter transmembrane region
APY30_11950	PF01654	APY30_11950
APY30_11955	PF02322	APY30_11955
APY30_11965	PF07690	Major Facilitator Superfamily
APY30_11970	PF02129	X-Pro dipeptidyl-peptidase (S15 family)
APY30_11970	PF08530	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
APY30_11975	PF00171	Aldehyde dehydrogenase family
APY30_11980	PF00696	Amino acid kinase family
APY30_11980	PF01472	PUA domain
APY30_11985	PF03795	YCII-related domain
APY30_11990	PF00206	Lyase
APY30_11995	PF01118	Semialdehyde dehydrogenase, NAD binding domain
APY30_12000	PF13302	Acetyltransferase (GNAT) domain
APY30_12005	PF00696	Amino acid kinase family
APY30_12005	PF04768	Protein of unknown function (DUF619)
APY30_12010	PF01546	Peptidase family M20/M25/M40
APY30_12010	PF07687	Peptidase dimerisation domain
APY30_12015	PF13508	Acetyltransferase (GNAT) domain
APY30_12020	PF00764	Arginosuccinate synthase
APY30_12025	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
APY30_12025	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
APY30_12035	PF01406	tRNA synthetases class I (C) catalytic domain
APY30_12035	PF09190	DALR domain
APY30_12040	PF02657	Fe-S metabolism associated domain
APY30_12045	PF05977	Transmembrane secretion effector
APY30_12050	PF01258	Prokaryotic dksA/traR C4-type zinc finger
APY30_12060	PF01809	APY30_12060
APY30_12065	PF01979	Amidohydrolase family
APY30_12070	PF01551	Peptidase family M23
APY30_12075	PF13669	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
APY30_12080	PF13520	Amino acid permease
APY30_12085	PF06751	Ethanolamine ammonia lyase large subunit (EutB)
APY30_12090	PF05985	Ethanolamine ammonia-lyase light chain (EutC)
APY30_12100	PF00753	Metallo-beta-lactamase superfamily
APY30_12105	PF16242	APY30_12105
APY30_12130	PF13683	APY30_12130
APY30_12135	PF00295	Glycosyl hydrolases family 28
APY30_12145	PF13419	Haloacid dehalogenase-like hydrolase
APY30_12150	PF13489	Methyltransferase domain
APY30_12155	PF01979	Amidohydrolase family
APY30_12165	PF01132	Elongation factor P (EF-P) OB domain
APY30_12165	PF08207	Elongation factor P (EF-P) KOW-like domain
APY30_12165	PF09285	Elongation factor P, C-terminal
APY30_12170	PF13353	4Fe-4S single cluster domain
APY30_12175	PF00563	EAL domain
APY30_12175	PF00672	HAMP domain
APY30_12175	PF00990	GGDEF domain
APY30_12175	PF17203	APY30_12175
APY30_12180	PF12974	ABC transporter, phosphonate, periplasmic substrate-binding protein
APY30_12185	PF00588	SpoU rRNA Methylase family
APY30_12190	PF00459	Inositol monophosphatase family
APY30_12195	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
APY30_12195	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
APY30_12200	PF00545	ribonuclease
APY30_12205	PF01337	Barstar (barnase inhibitor)
APY30_12210	PF00005	ABC transporter
APY30_12210	PF12848	ABC transporter
APY30_12210	PF16326	APY30_12210
APY30_12215	PF00270	DEAD/DEAH box helicase
APY30_12215	PF00271	Helicase conserved C-terminal domain
APY30_12215	PF03880	DbpA RNA binding domain
APY30_12220	PF00156	Phosphoribosyl transferase domain
APY30_12225	PF02696	APY30_12225
APY30_12230	PF07859	alpha/beta hydrolase fold
APY30_12235	PF00043	Glutathione S-transferase, C-terminal domain
APY30_12235	PF02798	Glutathione S-transferase, N-terminal domain
APY30_12240	PF00313	'Cold-shock' DNA-binding domain
APY30_12245	PF07152	YaeQ protein
APY30_12250	PF03486	HI0933-like protein
APY30_12255	PF00563	EAL domain
APY30_12255	PF00990	GGDEF domain
APY30_12255	PF13188	PAS domain
APY30_12260	PF01435	Peptidase family M48
APY30_12265	PF00749	tRNA synthetases class I (E and Q), catalytic domain
APY30_12270	PF00106	short chain dehydrogenase
APY30_12275	PF05233	APY30_12275
APY30_12275	PF07879	APY30_12275
APY30_12280	PF01963	APY30_12280
APY30_12285	PF07920	Protein of unknown function (DUF1684)
APY30_12290	PF01119	DNA mismatch repair protein, C-terminal domain
APY30_12290	PF08676	MutL C terminal dimerisation domain
APY30_12290	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_12295	PF01520	N-acetylmuramoyl-L-alanine amidase
APY30_12295	PF11741	AMIN domain
APY30_12300	PF02367	Uncharacterised P-loop hydrolase UPF0079
APY30_12305	PF01256	Carbohydrate kinase
APY30_12305	PF03853	YjeF-related protein N-terminus
APY30_12310	PF08331	APY30_12310
APY30_12310	PF13484	APY30_12310
APY30_12315	PF02601	APY30_12315
APY30_12315	PF13742	APY30_12315
APY30_12320	PF06057	Bacterial virulence protein (VirJ)
APY30_12325	PF03781	Sulfatase-modifying factor enzyme 1
APY30_12330	PF00570	HRDC domain
APY30_12330	PF01612	3'-5' exonuclease
APY30_12335	PF01068	ATP dependent DNA ligase domain
APY30_12335	PF04679	ATP dependent DNA ligase C terminal region
APY30_12335	PF13298	DNA polymerase Ligase (LigD)
APY30_12340	PF12244	APY30_12340
APY30_12345	PF00816	H-NS histone family
APY30_12355	PF00589	Phage integrase family
APY30_12370	PF01527	Transposase
APY30_12375	PF00665	Integrase core domain
APY30_12375	PF13276	APY30_12375
APY30_12390	PF01527	Transposase
APY30_12405	PF05016	Plasmid stabilisation system protein
APY30_12410	PF01402	Ribbon-helix-helix protein, copG family
APY30_12415	PF01527	Transposase
APY30_12420	PF00665	Integrase core domain
APY30_12420	PF13276	APY30_12420
APY30_12430	PF01527	Transposase
APY30_12435	PF00665	Integrase core domain
APY30_12445	PF00990	GGDEF domain
APY30_12450	PF01584	CheW-like domain
APY30_12455	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
APY30_12455	PF00672	HAMP domain
APY30_12455	PF12729	APY30_12455
APY30_12460	PF02245	Methylpurine-DNA glycosylase (MPG)
APY30_12465	PF00270	DEAD/DEAH box helicase
APY30_12465	PF00271	Helicase conserved C-terminal domain
APY30_12465	PF08494	APY30_12465
APY30_12470	PF11743	APY30_12470
APY30_12480	PF04386	Stringent starvation protein B
APY30_12485	PF00043	Glutathione S-transferase, C-terminal domain
APY30_12485	PF13417	Glutathione S-transferase, N-terminal domain
APY30_12490	PF02167	Cytochrome C1 family
APY30_12495	PF00032	Cytochrome b(C-terminal)/b6/petD
APY30_12495	PF00033	Cytochrome b(N-terminal)/b6/petB
APY30_12500	PF00355	Rieske [2Fe-2S] domain
APY30_12500	PF10399	Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal
APY30_12505	PF01464	Transglycosylase SLT domain
APY30_12510	PF08279	HTH domain
APY30_12510	PF13280	APY30_12510
APY30_12515	PF02798	Glutathione S-transferase, N-terminal domain
APY30_12520	PF00919	Uncharacterized protein family UPF0004
APY30_12520	PF01938	TRAM domain
APY30_12520	PF04055	Radical SAM superfamily
APY30_12525	PF02562	PhoH-like protein
APY30_12535	PF02130	Uncharacterized protein family UPF0054
APY30_12545	PF00571	CBS domain
APY30_12545	PF03471	Transporter associated domain
APY30_12550	PF13387	APY30_12550
APY30_12555	PF01544	CorA-like Mg2+ transporter protein
APY30_12560	PF00171	Aldehyde dehydrogenase family
APY30_12570	PF00528	Binding-protein-dependent transport system inner membrane component
APY30_12575	PF00528	Binding-protein-dependent transport system inner membrane component
APY30_12585	PF02321	Outer membrane efflux protein
APY30_12590	PF07690	Major Facilitator Superfamily
APY30_12595	PF13533	Biotin-lipoyl like
APY30_12595	PF16576	APY30_12595
APY30_12600	PF13416	Bacterial extracellular solute-binding protein
APY30_12605	PF00202	Aminotransferase class-III
APY30_12610	PF00120	Glutamine synthetase, catalytic domain
APY30_12615	PF07722	Peptidase C26
APY30_12620	PF00120	Glutamine synthetase, catalytic domain
APY30_12625	PF01266	FAD dependent oxidoreductase
APY30_12630	PF00072	Response regulator receiver domain
APY30_12630	PF00990	GGDEF domain
APY30_12635	PF01814	Hemerythrin HHE cation binding domain
APY30_12640	PF00083	Sugar (and other) transporter
APY30_12640	PF07690	Major Facilitator Superfamily
APY30_12650	PF00384	Molybdopterin oxidoreductase
APY30_12650	PF01568	Molydopterin dinucleotide binding domain
APY30_12655	PF02634	FdhD/NarQ family
APY30_12660	PF07690	Major Facilitator Superfamily
APY30_12670	PF00202	Aminotransferase class-III
APY30_12680	PF04286	APY30_12680
APY30_12685	PF00072	Response regulator receiver domain
APY30_12685	PF00512	His Kinase A (phospho-acceptor) domain
APY30_12685	PF01627	Hpt domain
APY30_12685	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_12685	PF03924	CHASE domain
APY30_12685	PF13426	PAS domain
APY30_12690	PF00072	Response regulator receiver domain
APY30_12690	PF13487	HD domain
APY30_12695	PF07690	Major Facilitator Superfamily
APY30_12700	PF05088	APY30_12700
APY30_12700	PF12466	APY30_12700
APY30_12705	PF00440	Bacterial regulatory proteins, tetR family
APY30_12710	PF16576	APY30_12710
APY30_12715	PF00873	AcrB/AcrD/AcrF family
APY30_12720	PF00356	Bacterial regulatory proteins, lacI family
APY30_12720	PF13377	Periplasmic binding protein-like domain
APY30_12725	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
APY30_12725	PF00381	PTS HPr component phosphorylation site
APY30_12725	PF00391	PEP-utilising enzyme, mobile domain
APY30_12725	PF02896	PEP-utilising enzyme, TIM barrel domain
APY30_12725	PF05524	PEP-utilising enzyme, N-terminal
APY30_12730	PF00294	pfkB family carbohydrate kinase
APY30_12735	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
APY30_12740	PF04966	Carbohydrate-selective porin, OprB family
APY30_12755	PF00665	Integrase core domain
APY30_12755	PF13276	APY30_12755
APY30_12760	PF01527	Transposase
APY30_12770	PF07791	APY30_12770
APY30_12780	PF00665	Integrase core domain
APY30_12785	PF01527	Transposase
APY30_12790	PF02355	Protein export membrane protein
APY30_12790	PF07549	SecD/SecF GG Motif
APY30_12795	PF02355	Protein export membrane protein
APY30_12795	PF07549	SecD/SecF GG Motif
APY30_12795	PF13721	SecD export protein N-terminal TM region
APY30_12800	PF02699	Preprotein translocase subunit
APY30_12805	PF01702	Queuine tRNA-ribosyltransferase
APY30_12810	PF02547	Queuosine biosynthesis protein
APY30_12815	PF01037	AsnC family
APY30_12815	PF13412	Winged helix-turn-helix DNA-binding
APY30_12825	PF00202	Aminotransferase class-III
APY30_12835	PF00665	Integrase core domain
APY30_12835	PF13276	APY30_12835
APY30_12840	PF01527	Transposase
APY30_12845	PF00149	Calcineurin-like phosphoesterase
APY30_12845	PF16656	APY30_12845
APY30_12850	PF02333	Phytase
APY30_12855	PF00593	TonB dependent receptor
APY30_12855	PF07715	TonB-dependent Receptor Plug Domain
APY30_12860	PF14681	Uracil phosphoribosyltransferase
APY30_12865	PF00759	Glycosyl hydrolase family 9
APY30_12865	PF02927	N-terminal ig-like domain of cellulase
APY30_12875	PF01019	Gamma-glutamyltranspeptidase
APY30_12880	PF00037	4Fe-4S binding domain
APY30_12895	PF01467	Cytidylyltransferase
APY30_12900	PF03602	Conserved hypothetical protein 95
APY30_12905	PF00183	Hsp90 protein
APY30_12905	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_12910	PF05593	APY30_12910
APY30_12920	PF01527	Transposase
APY30_12925	PF00665	Integrase core domain
APY30_12930	PF08845	APY30_12930
APY30_12935	PF07944	Putative glycosyl hydrolase of unknown function (DUF1680)
APY30_12940	PF00593	TonB dependent receptor
APY30_12940	PF07715	TonB-dependent Receptor Plug Domain
APY30_12945	PF00326	Prolyl oligopeptidase family
APY30_12945	PF00930	Dipeptidyl peptidase IV (DPP IV) N-terminal region
APY30_12950	PF04616	Glycosyl hydrolases family 43
APY30_12955	PF00754	F5/8 type C domain
APY30_12955	PF07532	APY30_12955
APY30_12960	PF00593	TonB dependent receptor
APY30_12960	PF07715	TonB-dependent Receptor Plug Domain
APY30_12970	PF00082	Subtilase family
APY30_12970	PF09286	Pro-kumamolisin, activation domain
APY30_12990	PF00326	Prolyl oligopeptidase family
APY30_12990	PF00930	Dipeptidyl peptidase IV (DPP IV) N-terminal region
APY30_12995	PF13520	Amino acid permease
APY30_13000	PF05960	Bacterial protein of unknown function (DUF885)
APY30_13005	PF05960	Bacterial protein of unknown function (DUF885)
APY30_13010	PF00557	Metallopeptidase family M24
APY30_13010	PF01321	Creatinase/Prolidase N-terminal domain
APY30_13015	PF00171	Aldehyde dehydrogenase family
APY30_13020	PF00701	Dihydrodipicolinate synthetase family
APY30_13025	PF07992	Pyridine nucleotide-disulphide oxidoreductase
APY30_13030	PF13510	2Fe-2S iron-sulfur cluster binding domain
APY30_13035	PF01266	FAD dependent oxidoreductase
APY30_13040	PF05544	Proline racemase
APY30_13045	PF08448	PAS fold
APY30_13045	PF12833	Helix-turn-helix domain
APY30_13050	PF00448	SRP54-type protein, GTPase domain
APY30_13050	PF02881	SRP54-type protein, helical bundle domain
APY30_13055	PF00633	Helix-hairpin-helix motif
APY30_13055	PF00730	HhH-GPD superfamily base excision DNA repair protein
APY30_13055	PF14815	NUDIX domain
APY30_13060	PF04362	Bacterial Fe(2+) trafficking
APY30_13065	PF00072	Response regulator receiver domain
APY30_13065	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_13065	PF13426	PAS domain
APY30_13075	PF10685	APY30_13075
APY30_13095	PF08212	Lipocalin-like domain
APY30_13100	PF03168	Late embryogenesis abundant protein
APY30_13105	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
APY30_13105	PF02770	Acyl-CoA dehydrogenase, middle domain
APY30_13105	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
APY30_13105	PF12418	APY30_13105
APY30_13105	PF12806	APY30_13105
APY30_13110	PF14279	APY30_13110
APY30_13115	PF02779	Transketolase, pyrimidine binding domain
APY30_13115	PF02780	Transketolase, C-terminal domain
APY30_13115	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
APY30_13120	PF04101	Glycosyltransferase family 28 C-terminal domain
APY30_13130	PF13506	Glycosyl transferase family 21
APY30_13135	PF01370	NAD dependent epimerase/dehydratase family
APY30_13140	PF00753	Metallo-beta-lactamase superfamily
APY30_13145	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
APY30_13145	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
APY30_13150	PF01963	APY30_13150
APY30_13155	PF06172	Cupin superfamily (DUF985)
APY30_13160	PF03808	APY30_13160
APY30_13165	PF04230	APY30_13165
APY30_13175	PF13440	APY30_13175
APY30_13180	PF13692	Glycosyl transferases group 1
APY30_13185	PF00534	Glycosyl transferases group 1
APY30_13185	PF13439	Glycosyltransferase Family 4
APY30_13190	PF01757	APY30_13190
APY30_13195	PF01757	APY30_13195
APY30_13205	PF02397	APY30_13205
APY30_13205	PF13727	CoA-binding domain
APY30_13210	PF02706	Chain length determinant protein
APY30_13210	PF13807	APY30_13210
APY30_13215	PF02563	Polysaccharide biosynthesis/export protein
APY30_13215	PF10531	SLBB domain
APY30_13225	PF13411	MerR HTH family regulatory protein
APY30_13230	PF00216	Bacterial DNA-binding protein
APY30_13235	PF01588	Putative tRNA binding domain
APY30_13235	PF03147	Ferredoxin-fold anticodon binding domain
APY30_13235	PF03483	B3/4 domain
APY30_13235	PF03484	tRNA synthetase B5 domain
APY30_13240	PF01409	tRNA synthetases class II core domain (F)
APY30_13240	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
APY30_13245	PF00453	Ribosomal protein L20
APY30_13250	PF01632	Ribosomal protein L35
APY30_13255	PF00707	Translation initiation factor IF-3, C-terminal domain
APY30_13255	PF05198	Translation initiation factor IF-3, N-terminal domain
APY30_13260	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
APY30_13260	PF02824	TGS domain
APY30_13260	PF03129	Anticodon binding domain
APY30_13260	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
APY30_13265	PF00356	Bacterial regulatory proteins, lacI family
APY30_13265	PF13377	Periplasmic binding protein-like domain
APY30_13270	PF00128	Alpha amylase, catalytic domain
APY30_13275	PF00665	Integrase core domain
APY30_13280	PF01527	Transposase
APY30_13285	PF01527	Transposase
APY30_13295	PF04610	APY30_13295
APY30_13300	PF01471	Putative peptidoglycan binding domain
APY30_13310	PF04610	APY30_13310
APY30_13320	PF03135	APY30_13320
APY30_13325	PF05101	APY30_13325
APY30_13330	PF04956	APY30_13330
APY30_13335	PF01464	Transglycosylase SLT domain
APY30_13340	PF00437	Type II/IV secretion system protein
APY30_13345	PF03743	Bacterial conjugation TrbI-like protein
APY30_13350	PF03524	Conjugal transfer protein
APY30_13355	PF04335	VirB8 protein
APY30_13360	PF10671	Toxin co-regulated pilus biosynthesis protein Q
APY30_13365	PF02534	Type IV secretory system Conjugative DNA transfer
APY30_13380	PF00271	Helicase conserved C-terminal domain
APY30_13380	PF02151	UvrB/uvrC motif
APY30_13380	PF04851	Type III restriction enzyme, res subunit
APY30_13380	PF12344	Ultra-violet resistance protein B
APY30_13385	PF12019	Type II transport protein GspH
APY30_13400	PF05567	Neisseria PilC beta-propeller domain
APY30_13405	PF14341	APY30_13405
APY30_13415	PF07963	Prokaryotic N-terminal methylation motif
APY30_13420	PF03641	Possible lysine decarboxylase
APY30_13420	PF11892	Domain of unknown function (DUF3412)
APY30_13420	PF14793	Domain of unknown function (DUF4478)
APY30_13425	PF07715	TonB-dependent Receptor Plug Domain
APY30_13425	PF13620	Carboxypeptidase regulatory-like domain
APY30_13430	PF01914	APY30_13430
APY30_13435	PF00106	short chain dehydrogenase
APY30_13440	PF00462	Glutaredoxin
APY30_13445	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
APY30_13445	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
APY30_13450	PF02222	ATP-grasp domain
APY30_13455	PF00731	AIR carboxylase
APY30_13460	PF03966	Trm112p-like protein
APY30_13465	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
APY30_13465	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
APY30_13470	PF10030	APY30_13470
APY30_13475	PF00013	KH domain
APY30_13475	PF00575	S1 RNA binding domain
APY30_13475	PF01138	3' exoribonuclease family, domain 1
APY30_13475	PF03725	3' exoribonuclease family, domain 2
APY30_13475	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
APY30_13480	PF00312	Ribosomal protein S15
APY30_13485	PF01509	TruB family pseudouridylate synthase (N terminal domain)
APY30_13485	PF09157	Pseudouridine synthase II TruB, C-terminal
APY30_13485	PF16198	APY30_13485
APY30_13490	PF02033	Ribosome-binding factor A
APY30_13495	PF00009	Elongation factor Tu GTP binding domain
APY30_13495	PF04760	Translation initiation factor IF-2, N-terminal region
APY30_13495	PF08364	APY30_13495
APY30_13495	PF11987	Translation-initiation factor 2
APY30_13500	PF00575	S1 RNA binding domain
APY30_13500	PF08529	NusA N-terminal domain
APY30_13500	PF13184	NusA-like KH domain
APY30_13500	PF14520	Helix-hairpin-helix domain
APY30_13505	PF02576	Uncharacterised BCR, YhbC family COG0779
APY30_13505	PF17384	APY30_13505
APY30_13515	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
APY30_13520	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
APY30_13525	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
APY30_13525	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
APY30_13530	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
APY30_13535	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
APY30_13540	PF12838	4Fe-4S dicluster domain
APY30_13545	PF00146	NADH dehydrogenase
APY30_13550	PF00384	Molybdopterin oxidoreductase
APY30_13550	PF01568	Molydopterin dinucleotide binding domain
APY30_13550	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
APY30_13550	PF13510	2Fe-2S iron-sulfur cluster binding domain
APY30_13555	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
APY30_13555	PF10531	SLBB domain
APY30_13555	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
APY30_13560	PF01257	Thioredoxin-like [2Fe-2S] ferredoxin
APY30_13565	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
APY30_13570	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
APY30_13575	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
APY30_13580	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
APY30_13590	PF03840	Preprotein translocase SecG subunit
APY30_13595	PF00121	Triosephosphate isomerase
APY30_13600	PF00106	short chain dehydrogenase
APY30_13605	PF01152	Bacterial-like globin
APY30_13610	PF11231	APY30_13610
APY30_13615	PF00563	EAL domain
APY30_13615	PF00672	HAMP domain
APY30_13615	PF00990	GGDEF domain
APY30_13615	PF14827	Sensory domain of two-component sensor kinase
APY30_13625	PF03171	2OG-Fe(II) oxygenase superfamily
APY30_13625	PF14226	non-haem dioxygenase in morphine synthesis N-terminal
APY30_13635	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
APY30_13635	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
APY30_13635	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
APY30_13635	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
APY30_13640	PF01039	Carboxyl transferase domain
APY30_13645	PF00290	Tryptophan synthase alpha chain
APY30_13655	PF00291	Pyridoxal-phosphate dependent enzyme
APY30_13660	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
APY30_13660	PF03466	LysR substrate binding domain
APY30_13665	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
APY30_13670	PF01416	tRNA pseudouridine synthase
APY30_13675	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
APY30_13690	PF01118	Semialdehyde dehydrogenase, NAD binding domain
APY30_13690	PF02774	Semialdehyde dehydrogenase, dimerisation domain
APY30_13695	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
APY30_13695	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
APY30_13700	PF01264	Chorismate synthase
APY30_13705	PF05175	Methyltransferase small domain
APY30_13710	PF02630	SCO1/SenC
APY30_13715	PF02666	APY30_13715
APY30_13720	PF00665	Integrase core domain
APY30_13725	PF01527	Transposase
APY30_13730	PF00665	Integrase core domain
APY30_13730	PF13276	APY30_13730
APY30_13735	PF01527	Transposase
APY30_13740	PF01464	Transglycosylase SLT domain
APY30_13740	PF01476	LysM domain
APY30_13745	PF05872	APY30_13745
APY30_13750	PF00293	NUDIX domain
APY30_13760	PF01694	Rhomboid family
APY30_13765	PF01272	Transcription elongation factor, GreA/GreB, C-term
APY30_13765	PF03449	Transcription elongation factor, N-terminal
APY30_13770	PF00919	Uncharacterized protein family UPF0004
APY30_13770	PF04055	Radical SAM superfamily
APY30_13775	PF01381	Helix-turn-helix
APY30_13780	PF04014	Antidote-toxin recognition MazE
APY30_13785	PF01381	Helix-turn-helix
APY30_13790	PF00004	ATPase family associated with various cellular activities (AAA)
APY30_13795	PF00082	Subtilase family
APY30_13800	PF09664	APY30_13800
APY30_13800	PF11796	APY30_13800
APY30_13805	PF01527	Transposase
APY30_13810	PF00665	Integrase core domain
APY30_13810	PF13276	APY30_13810
APY30_13820	PF01738	Dienelactone hydrolase family
APY30_13825	PF01230	HIT domain
APY30_13840	PF00692	dUTPase
APY30_13845	PF10609	ParA/MinD ATPase like
APY30_13850	PF00593	TonB dependent receptor
APY30_13850	PF07715	TonB-dependent Receptor Plug Domain
APY30_13855	PF00593	TonB dependent receptor
APY30_13855	PF07715	TonB-dependent Receptor Plug Domain
APY30_13860	PF01593	Flavin containing amine oxidoreductase
APY30_13865	PF01431	Peptidase family M13
APY30_13865	PF05649	Peptidase family M13
APY30_13870	PF01431	Peptidase family M13
APY30_13870	PF05649	Peptidase family M13
APY30_13875	PF01431	Peptidase family M13
APY30_13875	PF05649	Peptidase family M13
APY30_13880	PF01694	Rhomboid family
APY30_13885	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
APY30_13890	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
APY30_13890	PF07992	Pyridine nucleotide-disulphide oxidoreductase
APY30_13895	PF01266	FAD dependent oxidoreductase
APY30_13900	PF04235	APY30_13900
APY30_13905	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
APY30_13910	PF00877	NlpC/P60 family
APY30_13915	PF00877	NlpC/P60 family
APY30_13920	PF03061	Thioesterase superfamily
APY30_13925	PF13649	Methyltransferase domain
APY30_13930	PF00375	Sodium:dicarboxylate symporter family
APY30_13935	PF00245	Alkaline phosphatase
APY30_13945	PF01171	PP-loop family
APY30_13945	PF09179	TilS substrate binding domain
APY30_13945	PF11734	TilS substrate C-terminal domain
APY30_13950	PF02609	Exonuclease VII small subunit
APY30_13955	PF00348	Polyprenyl synthetase
APY30_13960	PF14521	Lysine-specific metallo-endopeptidase
APY30_13965	PF09685	APY30_13965
APY30_13970	PF01523	Putative modulator of DNA gyrase
APY30_13975	PF04751	Protein of unknown function (DUF615)
APY30_13980	PF01523	Putative modulator of DNA gyrase
APY30_13990	PF13116	APY30_13990
APY30_13990	PF13502	APY30_13990
APY30_13995	PF10150	Ribonuclease E/G family
APY30_14000	PF02545	Maf-like protein
APY30_14005	PF04402	Protein of unknown function (DUF541)
APY30_14010	PF00593	TonB dependent receptor
APY30_14010	PF07715	TonB-dependent Receptor Plug Domain
APY30_14010	PF13620	Carboxypeptidase regulatory-like domain
APY30_14015	PF03544	Gram-negative bacterial TonB protein C-terminal
APY30_14020	PF02590	Predicted SPOUT methyltransferase
APY30_14025	PF05787	Bacterial protein of unknown function (DUF839)
APY30_14025	PF10518	TAT (twin-arginine translocation) pathway signal sequence
APY30_14030	PF02410	Oligomerisation domain
APY30_14035	PF01467	Cytidylyltransferase
APY30_14040	PF06144	DNA polymerase III, delta subunit
APY30_14045	PF04390	Lipopolysaccharide-assembly
APY30_14050	PF00133	tRNA synthetases class I (I, L, M and V)
APY30_14050	PF08264	Anticodon-binding domain of tRNA
APY30_14050	PF13603	Leucyl-tRNA synthetase, Domain 2
APY30_14055	PF06197	APY30_14055
APY30_14060	PF00085	Thioredoxin
APY30_14060	PF14559	Tetratricopeptide repeat
APY30_14060	PF14561	Tetratricopeptide repeat
APY30_14070	PF14539	Domain of unknown function (DUF4442)
APY30_14080	PF12760	Transposase zinc-ribbon domain
APY30_14080	PF12762	APY30_14080
APY30_14095	PF04070	APY30_14095
APY30_14100	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
APY30_14105	PF00892	EamA-like transporter family
APY30_14125	PF14257	APY30_14125
APY30_14135	PF05960	Bacterial protein of unknown function (DUF885)
APY30_14140	PF00005	ABC transporter
APY30_14140	PF00664	ABC transporter transmembrane region
APY30_14145	PF07929	Plasmid pRiA4b ORF-3-like protein
APY30_14150	PF00873	AcrB/AcrD/AcrF family
APY30_14155	PF16576	APY30_14155
APY30_14160	PF06629	APY30_14160
APY30_14165	PF02321	Outer membrane efflux protein
APY30_14170	PF00072	Response regulator receiver domain
APY30_14170	PF00486	Transcriptional regulatory protein, C terminal
APY30_14180	PF00999	Sodium/hydrogen exchanger family
APY30_14185	PF00144	Beta-lactamase
APY30_14185	PF11954	APY30_14185
APY30_14190	PF03737	Demethylmenaquinone methyltransferase
APY30_14200	PF01904	Protein of unknown function DUF72
APY30_14205	PF00892	EamA-like transporter family
APY30_14210	PF00990	GGDEF domain
APY30_14210	PF01590	GAF domain
APY30_14215	PF00849	RNA pseudouridylate synthase
APY30_14215	PF01479	S4 domain
APY30_14220	PF00563	EAL domain
APY30_14220	PF00990	GGDEF domain
APY30_14220	PF08447	PAS fold
APY30_14225	PF00270	DEAD/DEAH box helicase
APY30_14225	PF00271	Helicase conserved C-terminal domain
APY30_14225	PF03880	DbpA RNA binding domain
APY30_14230	PF04542	Sigma-70 region 2
APY30_14230	PF08281	Sigma-70, region 4
APY30_14240	PF13275	S4 domain
APY30_14250	PF01124	MAPEG family
APY30_14255	PF13211	APY30_14255
APY30_14270	PF00730	HhH-GPD superfamily base excision DNA repair protein
APY30_14270	PF02805	Metal binding domain of Ada
APY30_14270	PF06029	AlkA N-terminal domain
APY30_14270	PF12833	Helix-turn-helix domain
APY30_14275	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
APY30_14275	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
APY30_14280	PF01663	Type I phosphodiesterase / nucleotide pyrophosphatase
APY30_14285	PF00654	Voltage gated chloride channel
APY30_14290	PF00107	Zinc-binding dehydrogenase
APY30_14290	PF08240	Alcohol dehydrogenase GroES-like domain
APY30_14295	PF17067	APY30_14295
APY30_14300	PF03203	APY30_14300
APY30_14305	PF00593	TonB dependent receptor
APY30_14305	PF07715	TonB-dependent Receptor Plug Domain
APY30_14310	PF00593	TonB dependent receptor
APY30_14310	PF07715	TonB-dependent Receptor Plug Domain
APY30_14315	PF00082	Subtilase family
APY30_14315	PF01483	Proprotein convertase P-domain
APY30_14325	PF00082	Subtilase family
APY30_14325	PF01483	Proprotein convertase P-domain
APY30_14340	PF07690	Major Facilitator Superfamily
APY30_14345	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
APY30_14345	PF03466	LysR substrate binding domain
APY30_14355	PF06719	APY30_14355
APY30_14355	PF12833	Helix-turn-helix domain
APY30_14360	PF07883	Cupin domain
APY30_14365	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
APY30_14365	PF03466	LysR substrate binding domain
APY30_14370	PF00248	Aldo/keto reductase family
APY30_14375	PF00440	Bacterial regulatory proteins, tetR family
APY30_14375	PF14246	AefR-like transcriptional repressor, C-terminal region
APY30_14380	PF02321	Outer membrane efflux protein
APY30_14385	PF00873	AcrB/AcrD/AcrF family
APY30_14390	PF00529	HlyD family secretion protein
APY30_14390	PF16576	APY30_14390
APY30_14395	PF00440	Bacterial regulatory proteins, tetR family
APY30_14395	PF14246	AefR-like transcriptional repressor, C-terminal region
APY30_14400	PF01475	Ferric uptake regulator family
APY30_14405	PF00749	tRNA synthetases class I (E and Q), catalytic domain
APY30_14410	PF12275	APY30_14410
APY30_14415	PF00795	Carbon-nitrogen hydrolase
APY30_14430	PF06123	APY30_14430
APY30_14435	PF00112	Papain family cysteine protease
APY30_14445	PF00512	His Kinase A (phospho-acceptor) domain
APY30_14445	PF00672	HAMP domain
APY30_14445	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_14450	PF00072	Response regulator receiver domain
APY30_14450	PF00486	Transcriptional regulatory protein, C terminal
APY30_14455	PF04378	Ribosomal RNA small subunit methyltransferase D, RsmJ
APY30_14460	PF13302	Acetyltransferase (GNAT) domain
APY30_14465	PF00270	DEAD/DEAH box helicase
APY30_14465	PF00271	Helicase conserved C-terminal domain
APY30_14465	PF02559	CarD-like/TRCF domain
APY30_14465	PF03461	TRCF domain
APY30_14480	PF07791	APY30_14480
APY30_14485	PF08845	APY30_14485
APY30_14490	PF13466	STAS domain
APY30_14495	PF01584	CheW-like domain
APY30_14495	PF01627	Hpt domain
APY30_14495	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_14495	PF02895	Signal transducing histidine kinase, homodimeric domain
APY30_14500	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
APY30_14505	PF01584	CheW-like domain
APY30_14510	PF00072	Response regulator receiver domain
APY30_14510	PF00563	EAL domain
APY30_14515	PF01739	CheR methyltransferase, SAM binding domain
APY30_14515	PF03705	CheR methyltransferase, all-alpha domain
APY30_14520	PF00072	Response regulator receiver domain
APY30_14520	PF01339	CheB methylesterase
APY30_14525	PF13091	PLD-like domain
APY30_14530	PF01431	Peptidase family M13
APY30_14530	PF05649	Peptidase family M13
APY30_14540	PF00300	Histidine phosphatase superfamily (branch 1)
APY30_14545	PF04493	Endonuclease V
APY30_14555	PF02678	Pirin
APY30_14555	PF05726	Pirin C-terminal cupin domain
APY30_14565	PF02566	OsmC-like protein
APY30_14570	PF02678	Pirin
APY30_14570	PF05726	Pirin C-terminal cupin domain
APY30_14575	PF02554	APY30_14575
APY30_14575	PF13722	APY30_14575
APY30_14580	PF04328	APY30_14580
APY30_14585	PF13419	Haloacid dehalogenase-like hydrolase
APY30_14590	PF12796	Ankyrin repeats (3 copies)
APY30_14595	PF11187	Protein of unknown function (DUF2974)
APY30_14600	PF05684	APY30_14600
APY30_14625	PF02625	XdhC and CoxI family
APY30_14625	PF13478	XdhC Rossmann domain
APY30_14635	PF00941	FAD binding domain in molybdopterin dehydrogenase
APY30_14635	PF03450	CO dehydrogenase flavoprotein C-terminal domain
APY30_14640	PF00111	2Fe-2S iron-sulfur cluster binding domain
APY30_14640	PF01799	[2Fe-2S] binding domain
APY30_14645	PF00107	Zinc-binding dehydrogenase
APY30_14645	PF08240	Alcohol dehydrogenase GroES-like domain
APY30_14650	PF00990	GGDEF domain
APY30_14650	PF02743	Cache domain
APY30_14655	PF00436	Single-strand binding protein family
APY30_14660	PF00348	Polyprenyl synthetase
APY30_14670	PF02875	Mur ligase family, glutamate ligase domain
APY30_14670	PF08245	Mur ligase middle domain
APY30_14685	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
APY30_14685	PF00696	Amino acid kinase family
APY30_14685	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
APY30_14690	PF02567	Phenazine biosynthesis-like protein
APY30_14695	PF02567	Phenazine biosynthesis-like protein
APY30_14700	PF05433	APY30_14700
APY30_14705	PF02566	OsmC-like protein
APY30_14710	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
APY30_14710	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
APY30_14715	PF03652	Uncharacterised protein family (UPF0081)
APY30_14720	PF02622	Uncharacterized ACR, COG1678
APY30_14730	PF03352	Methyladenine glycosylase
APY30_14735	PF01904	Protein of unknown function DUF72
APY30_14740	PF02588	APY30_14740
APY30_14745	PF00437	Type II/IV secretion system protein
APY30_14750	PF00437	Type II/IV secretion system protein
APY30_14755	PF01168	Alanine racemase, N-terminal domain
APY30_14760	PF03807	NADP oxidoreductase coenzyme F420-dependent
APY30_14760	PF14748	Pyrroline-5-carboxylate reductase dimerisation
APY30_14765	PF00216	Bacterial DNA-binding protein
APY30_14770	PF01551	Peptidase family M23
APY30_14775	PF12977	Domain of Unknown Function with PDB structure (DUF3861)
APY30_14785	PF07273	Protein of unknown function (DUF1439)
APY30_14790	PF01965	DJ-1/PfpI family
APY30_14795	PF00856	SET domain
APY30_14800	PF02082	Transcriptional regulator
APY30_14805	PF01458	Uncharacterized protein family (UPF0051)
APY30_14810	PF00005	ABC transporter
APY30_14815	PF01458	Uncharacterized protein family (UPF0051)
APY30_14820	PF00266	Aminotransferase class-V
APY30_14825	PF13673	Acetyltransferase (GNAT) domain
APY30_14830	PF00355	Rieske [2Fe-2S] domain
APY30_14835	PF00593	TonB dependent receptor
APY30_14835	PF07715	TonB-dependent Receptor Plug Domain
APY30_14840	PF13640	2OG-Fe(II) oxygenase superfamily
APY30_14845	PF08238	Sel1 repeat
APY30_14850	PF16357	APY30_14850
APY30_14855	PF10029	APY30_14855
APY30_14860	PF10670	APY30_14860
APY30_14865	PF02424	ApbE family
APY30_14870	PF00175	Oxidoreductase NAD-binding domain
APY30_14870	PF00258	Flavodoxin
APY30_14875	PF13202	EF hand
APY30_14875	PF13499	EF-hand domain pair
APY30_14880	PF05962	HutD
APY30_14885	PF12836	Helix-hairpin-helix motif
APY30_14890	PF01546	Peptidase family M20/M25/M40
APY30_14890	PF07687	Peptidase dimerisation domain
APY30_14895	PF04226	APY30_14895
APY30_14900	PF01636	Phosphotransferase enzyme family
APY30_14905	PF00483	Nucleotidyl transferase
APY30_14910	PF00308	Bacterial dnaA  protein
APY30_14915	PF01594	APY30_14915
APY30_14920	PF09839	APY30_14920
APY30_14925	PF00586	AIR synthase related protein, N-terminal domain
APY30_14925	PF02769	AIR synthase related protein, C-terminal domain
APY30_14935	PF09997	APY30_14935
APY30_14940	PF00551	Formyl transferase
APY30_14945	PF11306	Protein of unknown function (DUF3108)
APY30_14950	PF11306	Protein of unknown function (DUF3108)
APY30_14960	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
APY30_14965	PF01722	BolA-like protein
APY30_14970	PF00571	CBS domain
APY30_14970	PF01380	SIS domain
APY30_14975	PF08282	haloacid dehalogenase-like hydrolase
APY30_14980	PF06835	Lipopolysaccharide-assembly, LptC-related
APY30_14985	PF03968	OstA-like protein
APY30_14990	PF00005	ABC transporter
APY30_14990	PF12399	Branched-chain amino acid ATP-binding cassette transporter
APY30_14995	PF00309	APY30_14995
APY30_14995	PF04552	Sigma-54, DNA binding domain
APY30_14995	PF04963	Sigma-54 factor, core binding domain
APY30_15000	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
APY30_15005	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
APY30_15010	PF02603	HPr Serine kinase N terminus
APY30_15010	PF07475	HPr Serine kinase C-terminal domain
APY30_15015	PF03668	APY30_15015
APY30_15020	PF03610	PTS system fructose IIA component
APY30_15025	PF00381	PTS HPr component phosphorylation site
APY30_15030	PF00391	PEP-utilising enzyme, mobile domain
APY30_15030	PF02896	PEP-utilising enzyme, TIM barrel domain
APY30_15030	PF05524	PEP-utilising enzyme, N-terminal
APY30_15035	PF00571	CBS domain
APY30_15035	PF01769	Divalent cation transporter
APY30_15035	PF03448	MgtE intracellular N domain
APY30_15040	PF00326	Prolyl oligopeptidase family
APY30_15045	PF02322	APY30_15045
APY30_15050	PF01654	APY30_15050
APY30_15055	PF01244	Membrane dipeptidase (Peptidase family M19)
APY30_15060	PF00324	Amino acid permease
APY30_15070	PF01527	Transposase
APY30_15075	PF13276	APY30_15075
APY30_15075	PF13683	APY30_15075
APY30_15085	PF00561	alpha/beta hydrolase fold
APY30_15095	PF00196	Bacterial regulatory proteins, luxR family
APY30_15095	PF03472	Autoinducer binding domain
APY30_15100	PF13520	Amino acid permease
APY30_15125	PF12706	Beta-lactamase superfamily domain
APY30_15130	PF04820	Tryptophan halogenase
APY30_15135	PF13621	Cupin-like domain
APY30_15140	PF07277	APY30_15140
APY30_15145	PF00593	TonB dependent receptor
APY30_15145	PF07715	TonB-dependent Receptor Plug Domain
APY30_15155	PF01433	Peptidase family M1
APY30_15160	PF00376	MerR family regulatory protein
APY30_15160	PF09278	MerR, DNA binding
APY30_15170	PF01527	Transposase
APY30_15175	PF00665	Integrase core domain
APY30_15175	PF13276	APY30_15175
APY30_15190	PF03738	Glutathionylspermidine synthase preATP-grasp
APY30_15195	PF06693	APY30_15195
APY30_15200	PF03994	APY30_15200
APY30_15205	PF10679	APY30_15205
APY30_15210	PF07885	Ion channel
APY30_15215	PF04012	APY30_15215
APY30_15220	PF09938	APY30_15220
APY30_15225	PF01243	Pyridoxamine 5'-phosphate oxidase
APY30_15225	PF10590	Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
APY30_15230	PF01202	Shikimate kinase
APY30_15235	PF01761	3-dehydroquinate synthase
APY30_15245	PF01208	Uroporphyrinogen decarboxylase (URO-D)
APY30_15255	PF00072	Response regulator receiver domain
APY30_15255	PF00512	His Kinase A (phospho-acceptor) domain
APY30_15255	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_15255	PF07494	Two component regulator propeller
APY30_15255	PF07495	Y_Y_Y domain
APY30_15260	PF00072	Response regulator receiver domain
APY30_15260	PF00512	His Kinase A (phospho-acceptor) domain
APY30_15260	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_15260	PF07494	Two component regulator propeller
APY30_15260	PF07495	Y_Y_Y domain
APY30_15265	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_15270	PF00072	Response regulator receiver domain
APY30_15270	PF00512	His Kinase A (phospho-acceptor) domain
APY30_15270	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_15270	PF07494	Two component regulator propeller
APY30_15270	PF07495	Y_Y_Y domain
APY30_15275	PF04264	YceI-like domain
APY30_15280	PF01292	Prokaryotic cytochrome b561
APY30_15285	PF04264	YceI-like domain
APY30_15290	PF05768	Glutaredoxin-like domain (DUF836)
APY30_15295	PF03313	APY30_15295
APY30_15295	PF03315	Serine dehydratase beta chain
APY30_15305	PF00742	Homoserine dehydrogenase
APY30_15305	PF03447	Homoserine dehydrogenase, NAD binding domain
APY30_15310	PF01053	Cys/Met metabolism PLP-dependent enzyme
APY30_15315	PF00561	alpha/beta hydrolase fold
APY30_15320	PF01551	Peptidase family M23
APY30_15325	PF00009	Elongation factor Tu GTP binding domain
APY30_15325	PF16658	APY30_15325
APY30_15330	PF03006	APY30_15330
APY30_15335	PF05170	APY30_15335
APY30_15340	PF00571	CBS domain
APY30_15345	PF00535	Glycosyl transferase family 2
APY30_15350	PF00912	Transglycosylase
APY30_15355	PF01430	Hsp33 protein
APY30_15365	PF00593	TonB dependent receptor
APY30_15365	PF07715	TonB-dependent Receptor Plug Domain
APY30_15370	PF00665	Integrase core domain
APY30_15370	PF13276	APY30_15370
APY30_15375	PF01527	Transposase
APY30_15380	PF01527	Transposase
APY30_15385	PF13276	APY30_15385
APY30_15385	PF13683	APY30_15385
APY30_15390	PF01527	Transposase
APY30_15395	PF00665	Integrase core domain
APY30_15405	PF00440	Bacterial regulatory proteins, tetR family
APY30_15410	PF12146	Putative lysophospholipase
APY30_15415	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
APY30_15415	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
APY30_15415	PF09317	APY30_15415
APY30_15420	PF06993	APY30_15420
APY30_15425	PF07690	Major Facilitator Superfamily
APY30_15430	PF00144	Beta-lactamase
APY30_15445	PF01597	Glycine cleavage H-protein
APY30_15450	PF01571	Aminomethyltransferase folate-binding domain
APY30_15450	PF08669	Glycine cleavage T-protein C-terminal barrel domain
APY30_15460	PF02694	APY30_15460
APY30_15465	PF03819	MazG nucleotide pyrophosphohydrolase domain
APY30_15470	PF00459	Inositol monophosphatase family
APY30_15475	PF00293	NUDIX domain
APY30_15480	PF00202	Aminotransferase class-III
APY30_15485	PF04452	RNA methyltransferase
APY30_15490	PF02685	Glucokinase
APY30_15495	PF00593	TonB dependent receptor
APY30_15495	PF07715	TonB-dependent Receptor Plug Domain
APY30_15500	PF01120	Alpha-L-fucosidase
APY30_15500	PF16757	APY30_15500
APY30_15505	PF00704	Glycosyl hydrolases family 18
APY30_15510	PF00728	Glycosyl hydrolase family 20, catalytic domain
APY30_15510	PF02838	Glycosyl hydrolase family 20, domain 2
APY30_15510	PF13290	APY30_15510
APY30_15515	PF00703	Glycosyl hydrolases family 2
APY30_15515	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
APY30_15520	PF00933	Glycosyl hydrolase family 3 N terminal domain
APY30_15520	PF01915	Glycosyl hydrolase family 3 C-terminal domain
APY30_15520	PF07691	PA14 domain
APY30_15520	PF14310	Fibronectin type III-like domain
APY30_15525	PF00005	ABC transporter
APY30_15525	PF00664	ABC transporter transmembrane region
APY30_15525	PF03412	Peptidase C39 family
APY30_15540	PF00665	Integrase core domain
APY30_15545	PF01527	Transposase
APY30_15550	PF06824	Protein of unknown function (DUF1237)
APY30_15555	PF07971	Glycosyl hydrolase family 92
APY30_15560	PF01301	Glycosyl hydrolases family 35
APY30_15575	PF11747	APY30_15575
APY30_15580	PF13088	BNR repeat-like domain
APY30_15585	PF13855	Leucine rich repeat
APY30_15590	PF03932	CutC family
APY30_15595	PF01112	Asparaginase
APY30_15605	PF13302	Acetyltransferase (GNAT) domain
APY30_15610	PF01584	CheW-like domain
APY30_15615	PF01339	CheB methylesterase
APY30_15620	PF00072	Response regulator receiver domain
APY30_15620	PF01584	CheW-like domain
APY30_15620	PF01627	Hpt domain
APY30_15620	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_15620	PF02895	Signal transducing histidine kinase, homodimeric domain
APY30_15625	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
APY30_15630	PF01584	CheW-like domain
APY30_15635	PF00072	Response regulator receiver domain
APY30_15640	PF00072	Response regulator receiver domain
APY30_15645	PF02951	Prokaryotic glutathione synthetase, N-terminal domain
APY30_15645	PF02955	Prokaryotic glutathione synthetase, ATP-grasp domain
APY30_15650	PF03544	Gram-negative bacterial TonB protein C-terminal
APY30_15655	PF03747	ADP-ribosylglycohydrolase
APY30_15660	PF00814	Glycoprotease family
APY30_15665	PF13307	Helicase C-terminal domain
APY30_15675	PF00905	Penicillin binding protein transpeptidase domain
APY30_15675	PF00912	Transglycosylase
APY30_15675	PF14814	Bifunctional transglycosylase second domain
APY30_15680	PF00535	Glycosyl transferase family 2
APY30_15680	PF13692	Glycosyl transferases group 1
APY30_15690	PF02824	TGS domain
APY30_15690	PF04607	Region found in RelA / SpoT proteins
APY30_15690	PF13291	ACT domain
APY30_15690	PF13328	HD domain
APY30_15695	PF12706	Beta-lactamase superfamily domain
APY30_15700	PF03070	TENA/THI-4/PQQC family
APY30_15705	PF05402	Coenzyme PQQ synthesis protein D (PqqD)
APY30_15710	PF04055	Radical SAM superfamily
APY30_15710	PF13186	Iron-sulfur cluster-binding domain
APY30_15710	PF13353	4Fe-4S single cluster domain
APY30_15720	PF10142	PhoPQ-activated pathogenicity-related protein
APY30_15725	PF02685	Glucokinase
APY30_15730	PF00593	TonB dependent receptor
APY30_15730	PF07715	TonB-dependent Receptor Plug Domain
APY30_15735	PF00270	DEAD/DEAH box helicase
APY30_15735	PF00271	Helicase conserved C-terminal domain
APY30_15735	PF04408	Helicase associated domain (HA2)
APY30_15735	PF07717	Oligonucleotide/oligosaccharide-binding (OB)-fold
APY30_15735	PF11898	APY30_15735
APY30_15740	PF00210	Ferritin-like domain
APY30_15745	PF00270	DEAD/DEAH box helicase
APY30_15745	PF00271	Helicase conserved C-terminal domain
APY30_15745	PF00570	HRDC domain
APY30_15745	PF09382	RQC domain
APY30_15745	PF16124	APY30_15745
APY30_15755	PF00072	Response regulator receiver domain
APY30_15765	PF01479	S4 domain
APY30_15780	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
APY30_15780	PF00672	HAMP domain
APY30_15780	PF12729	APY30_15780
APY30_15785	PF01810	APY30_15785
APY30_15790	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
APY30_15790	PF03466	LysR substrate binding domain
APY30_15795	PF00072	Response regulator receiver domain
APY30_15800	PF07536	APY30_15800
APY30_15800	PF08448	PAS fold
APY30_15805	PF06508	Queuosine biosynthesis protein QueC
APY30_15815	PF04055	Radical SAM superfamily
APY30_15815	PF13394	4Fe-4S single cluster domain
APY30_15820	PF13525	Outer membrane lipoprotein
APY30_15820	PF16331	APY30_15820
APY30_15825	PF00691	OmpA family
APY30_15830	PF04052	TolB amino-terminal domain
APY30_15830	PF07676	WD40-like Beta Propeller Repeat
APY30_15835	PF13103	TonB C terminal
APY30_15840	PF02472	Biopolymer transport protein ExbD/TolR
APY30_15845	PF01618	APY30_15845
APY30_15850	PF03061	Thioesterase superfamily
APY30_15855	PF05491	Holliday junction DNA helicase ruvB C-terminus
APY30_15855	PF05496	Holliday junction DNA helicase ruvB N-terminus
APY30_15865	PF02705	APY30_15865
APY30_15870	PF01330	RuvA N terminal domain
APY30_15870	PF07499	RuvA, C-terminal domain
APY30_15870	PF14520	Helix-hairpin-helix domain
APY30_15875	PF02075	Crossover junction endodeoxyribonuclease RuvC
APY30_15880	PF01709	Transcriptional regulator
APY30_15885	PF12697	Alpha/beta hydrolase family
APY30_15890	PF00583	Acetyltransferase (GNAT) family
APY30_15895	PF00152	tRNA synthetases class II (D, K and N)
APY30_15895	PF01336	OB-fold nucleic acid binding domain
APY30_15895	PF02938	GAD domain
APY30_15900	PF11218	APY30_15900
APY30_15905	PF09723	APY30_15905
APY30_15910	PF07690	Major Facilitator Superfamily
APY30_15915	PF00593	TonB dependent receptor
APY30_15915	PF07715	TonB-dependent Receptor Plug Domain
APY30_15925	PF13354	Beta-lactamase enzyme family
APY30_15930	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
APY30_15930	PF03466	LysR substrate binding domain
APY30_15935	PF14317	APY30_15935
APY30_15940	PF00005	ABC transporter
APY30_15940	PF12848	ABC transporter
APY30_15940	PF16326	APY30_15940
APY30_15955	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
APY30_15965	PF00593	TonB dependent receptor
APY30_15965	PF07715	TonB-dependent Receptor Plug Domain
APY30_15975	PF00999	Sodium/hydrogen exchanger family
APY30_15975	PF02254	TrkA-N domain
APY30_15995	PF03328	HpcH/HpaI aldolase/citrate lyase family
APY30_16000	PF00593	TonB dependent receptor
APY30_16000	PF07715	TonB-dependent Receptor Plug Domain
APY30_16005	PF02655	ATP-grasp domain
APY30_16010	PF04183	IucA / IucC family
APY30_16010	PF06276	Ferric iron reductase FhuF-like transporter
APY30_16015	PF07690	Major Facilitator Superfamily
APY30_16020	PF04183	IucA / IucC family
APY30_16020	PF06276	Ferric iron reductase FhuF-like transporter
APY30_16025	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
APY30_16025	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
APY30_16035	PF02654	APY30_16035
APY30_16040	PF00300	Histidine phosphatase superfamily (branch 1)
APY30_16045	PF02277	Phosphoribosyltransferase
APY30_16050	PF02283	Cobinamide kinase / cobinamide phosphate guanyltransferase
APY30_16055	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
APY30_16055	PF07685	CobB/CobQ-like glutamine amidotransferase domain
APY30_16065	PF03186	APY30_16065
APY30_16070	PF02572	ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
APY30_16070	PF12557	Cob(I)alamin adenosyltransferase N terminal
APY30_16085	PF00593	TonB dependent receptor
APY30_16085	PF07715	TonB-dependent Receptor Plug Domain
APY30_16090	PF00004	ATPase family associated with various cellular activities (AAA)
APY30_16090	PF02861	Clp amino terminal domain
APY30_16090	PF07724	AAA domain (Cdc48 subfamily)
APY30_16090	PF10431	C-terminal, D2-small domain, of ClpB protein
APY30_16095	PF00005	ABC transporter
APY30_16100	PF00528	Binding-protein-dependent transport system inner membrane component
APY30_16105	PF09084	NMT1/THI5 like
APY30_16110	PF00248	Aldo/keto reductase family
APY30_16120	PF00593	TonB dependent receptor
APY30_16120	PF07715	TonB-dependent Receptor Plug Domain
APY30_16125	PF01541	GIY-YIG catalytic domain
APY30_16130	PF14497	Glutathione S-transferase, C-terminal domain
APY30_16135	PF11219	APY30_16135
APY30_16155	PF12098	APY30_16155
APY30_16160	PF00593	TonB dependent receptor
APY30_16160	PF07715	TonB-dependent Receptor Plug Domain
APY30_16165	PF02358	Trehalose-phosphatase
APY30_16170	PF00723	Glycosyl hydrolases family 15
APY30_16175	PF00982	Glycosyltransferase family 20
APY30_16180	PF01011	PQQ enzyme repeat
APY30_16180	PF13360	PQQ-like domain
APY30_16185	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
APY30_16190	PF04134	APY30_16190
APY30_16195	PF13761	APY30_16195
APY30_16200	PF02578	Multi-copper polyphenol oxidoreductase laccase
APY30_16205	PF00849	RNA pseudouridylate synthase
APY30_16210	PF13525	Outer membrane lipoprotein
APY30_16220	PF00795	Carbon-nitrogen hydrolase
APY30_16220	PF02540	NAD synthase
APY30_16225	PF04480	Protein of unknown function (DUF559)
APY30_16235	PF00549	CoA-ligase
APY30_16235	PF02629	CoA binding domain
APY30_16240	PF00549	CoA-ligase
APY30_16240	PF08442	ATP-grasp domain
APY30_16245	PF00512	His Kinase A (phospho-acceptor) domain
APY30_16245	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_16255	PF00072	Response regulator receiver domain
APY30_16255	PF00158	Sigma-54 interaction domain
APY30_16255	PF02954	Bacterial regulatory protein, Fis family
APY30_16265	PF00437	Type II/IV secretion system protein
APY30_16265	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
APY30_16270	PF00114	Pilin (bacterial filament)
APY30_16270	PF07963	Prokaryotic N-terminal methylation motif
APY30_16275	PF00482	Type II secretion system (T2SS), protein F
APY30_16280	PF01478	Type IV leader peptidase family
APY30_16280	PF06750	APY30_16280
APY30_16285	PF01121	Dephospho-CoA kinase
APY30_16295	PF01527	Transposase
APY30_16300	PF00665	Integrase core domain
APY30_16305	PF13276	APY30_16305
APY30_16305	PF13683	APY30_16305
APY30_16310	PF01527	Transposase
APY30_16315	PF08845	APY30_16315
APY30_16320	PF00512	His Kinase A (phospho-acceptor) domain
APY30_16320	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_16325	PF00072	Response regulator receiver domain
APY30_16325	PF00486	Transcriptional regulatory protein, C terminal
APY30_16335	PF08443	RimK-like ATP-grasp domain
APY30_16340	PF00128	Alpha amylase, catalytic domain
APY30_16340	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
APY30_16345	PF00816	H-NS histone family
APY30_16355	PF00565	Staphylococcal nuclease homologue
APY30_16365	PF03389	MobA/MobL family
APY30_16380	PF13391	APY30_16380
APY30_16400	PF07791	APY30_16400
APY30_16415	PF01935	Domain of unknown function DUF87
APY30_16420	PF02086	D12 class N6 adenine-specific DNA methyltransferase
APY30_16425	PF04002	RadC-like JAB domain
APY30_16430	PF13304	AAA domain
APY30_16450	PF00589	Phage integrase family
APY30_16455	PF13304	AAA domain
APY30_16480	PF13560	Helix-turn-helix domain
APY30_16485	PF14020	APY30_16485
APY30_16495	PF13672	Protein phosphatase 2C
APY30_16500	PF00092	von Willebrand factor type A domain
APY30_16520	PF15649	APY30_16520
APY30_16525	PF05593	APY30_16525
APY30_16530	PF00589	Phage integrase family
APY30_16540	PF00657	GDSL-like Lipase/Acylhydrolase
APY30_16540	PF03797	Autotransporter beta-domain
APY30_16545	PF02597	ThiS family
APY30_16550	PF05690	Thiazole biosynthesis protein ThiG
APY30_16555	PF02390	Putative methyltransferase
APY30_16560	PF02080	TrkA-C domain
APY30_16560	PF03600	Citrate transporter
APY30_16565	PF00355	Rieske [2Fe-2S] domain
APY30_16580	PF01741	Large-conductance mechanosensitive channel, MscL
APY30_16585	PF04389	Peptidase family M28
APY30_16595	PF00356	Bacterial regulatory proteins, lacI family
APY30_16600	PF01527	Transposase
APY30_16605	PF00665	Integrase core domain
APY30_16605	PF13276	APY30_16605
APY30_16615	PF00593	TonB dependent receptor
APY30_16615	PF07715	TonB-dependent Receptor Plug Domain
APY30_16620	PF00703	Glycosyl hydrolases family 2
APY30_16620	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
APY30_16620	PF02837	Glycosyl hydrolases family 2, sugar binding domain
APY30_16620	PF13385	Concanavalin A-like lectin/glucanases superfamily
APY30_16625	PF10566	Glycoside hydrolase 97
APY30_16625	PF14508	Glycosyl-hydrolase 97 N-terminal
APY30_16625	PF14509	Glycosyl-hydrolase 97 C-terminal, oligomerisation
APY30_16630	PF03080	APY30_16630
APY30_16635	PF00135	Carboxylesterase family
APY30_16640	PF00588	SpoU rRNA Methylase family
APY30_16640	PF08032	RNA 2'-O ribose methyltransferase substrate binding
APY30_16645	PF13302	Acetyltransferase (GNAT) domain
APY30_16650	PF01433	Peptidase family M1
APY30_16650	PF11838	ERAP1-like C-terminal domain
APY30_16655	PF07791	APY30_16655
APY30_16665	PF00665	Integrase core domain
APY30_16665	PF13276	APY30_16665
APY30_16670	PF01527	Transposase
APY30_16680	PF00873	AcrB/AcrD/AcrF family
APY30_16685	PF16576	APY30_16685
APY30_16690	PF00009	Elongation factor Tu GTP binding domain
APY30_16690	PF01583	Adenylylsulphate kinase
APY30_16695	PF01507	Phosphoadenosine phosphosulfate reductase family
APY30_16700	PF00175	Oxidoreductase NAD-binding domain
APY30_16700	PF00258	Flavodoxin
APY30_16700	PF00667	FAD binding domain
APY30_16705	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
APY30_16705	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
APY30_16710	PF01507	Phosphoadenosine phosphosulfate reductase family
APY30_16715	PF03929	APY30_16715
APY30_16720	PF00593	TonB dependent receptor
APY30_16720	PF07715	TonB-dependent Receptor Plug Domain
APY30_16725	PF11162	APY30_16725
APY30_16730	PF01590	GAF domain
APY30_16730	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_16745	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
APY30_16745	PF03466	LysR substrate binding domain
APY30_16750	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
APY30_16755	PF00291	Pyridoxal-phosphate dependent enzyme
APY30_16760	PF04191	Phospholipid methyltransferase
APY30_16765	PF01661	Macro domain
APY30_16770	PF00274	Fructose-bisphosphate aldolase class-I
APY30_16775	PF00224	Pyruvate kinase, barrel domain
APY30_16775	PF02887	Pyruvate kinase, alpha/beta domain
APY30_16785	PF00162	Phosphoglycerate kinase
APY30_16790	PF13163	APY30_16790
APY30_16805	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
APY30_16805	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
APY30_16810	PF08332	Calcium/calmodulin dependent protein kinase II Association
APY30_16815	PF03922	OmpW family
APY30_16820	PF03922	OmpW family
APY30_16825	PF02265	S1/P1 Nuclease
APY30_16830	PF00753	Metallo-beta-lactamase superfamily
APY30_16835	PF13531	Bacterial extracellular solute-binding protein
APY30_16840	PF00528	Binding-protein-dependent transport system inner membrane component
APY30_16845	PF00005	ABC transporter
APY30_16855	PF03544	Gram-negative bacterial TonB protein C-terminal
APY30_16855	PF05569	BlaR1 peptidase M56
APY30_16860	PF03965	Penicillinase repressor
APY30_16865	PF13336	Acetyl-CoA hydrolase/transferase C-terminal domain
APY30_16870	PF16670	APY30_16870
APY30_16880	PF00665	Integrase core domain
APY30_16885	PF01527	Transposase
APY30_16900	PF00593	TonB dependent receptor
APY30_16900	PF07715	TonB-dependent Receptor Plug Domain
APY30_16920	PF00456	Transketolase, thiamine diphosphate binding domain
APY30_16920	PF02779	Transketolase, pyrimidine binding domain
APY30_16920	PF02780	Transketolase, C-terminal domain
APY30_16925	PF00375	Sodium:dicarboxylate symporter family
APY30_16930	PF13584	APY30_16930
APY30_16935	PF00515	Tetratricopeptide repeat
APY30_16935	PF13519	von Willebrand factor type A domain
APY30_16940	PF00092	von Willebrand factor type A domain
APY30_16945	PF14316	APY30_16945
APY30_16950	PF01882	APY30_16950
APY30_16955	PF07726	ATPase family associated with various cellular activities (AAA)
APY30_16960	PF00263	APY30_16960
APY30_16960	PF03958	Bacterial type II/III secretion system short domain
APY30_16960	PF07660	Secretin and TonB N terminus short domain
APY30_16965	PF04351	Pilus assembly protein, PilP
APY30_16970	PF04350	Pilus assembly protein, PilO
APY30_16975	PF05137	APY30_16975
APY30_16980	PF11104	Type IV pilus assembly protein PilM;
APY30_16985	PF00905	Penicillin binding protein transpeptidase domain
APY30_16985	PF00912	Transglycosylase
APY30_16985	PF17092	APY30_16985
APY30_16995	PF00285	Citrate synthase
APY30_17000	PF01197	Ribosomal protein L31
APY30_17005	PF01156	Inosine-uridine preferring nucleoside hydrolase
APY30_17010	PF00270	DEAD/DEAH box helicase
APY30_17010	PF00271	Helicase conserved C-terminal domain
APY30_17010	PF17191	APY30_17010
APY30_17015	PF01042	Endoribonuclease L-PSP
APY30_17020	PF02824	TGS domain
APY30_17020	PF04607	Region found in RelA / SpoT proteins
APY30_17020	PF13291	ACT domain
APY30_17020	PF13328	HD domain
APY30_17025	PF01192	RNA polymerase Rpb6
APY30_17030	PF00625	Guanylate kinase
APY30_17035	PF03755	APY30_17035
APY30_17035	PF08340	APY30_17035
APY30_17040	PF01138	3' exoribonuclease family, domain 1
APY30_17040	PF03725	3' exoribonuclease family, domain 2
APY30_17045	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
APY30_17050	PF01725	Ham1 family
APY30_17055	PF04055	Radical SAM superfamily
APY30_17055	PF06969	HemN C-terminal domain
APY30_17060	PF07793	APY30_17060
APY30_17065	PF07238	PilZ domain
APY30_17070	PF00557	Metallopeptidase family M24
APY30_17080	PF00557	Metallopeptidase family M24
APY30_17080	PF05195	Aminopeptidase P, N-terminal domain
APY30_17085	PF03695	Uncharacterised protein family (UPF0149)
APY30_17095	PF05164	Cell division protein ZapA
APY30_17100	PF01812	5-formyltetrahydrofolate cyclo-ligase family
APY30_17105	PF01878	EVE domain
APY30_17110	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
APY30_17115	PF02643	Uncharacterized ACR, COG1430
APY30_17120	PF13369	APY30_17120
APY30_17120	PF13371	Tetratricopeptide repeat
APY30_17125	PF00301	Rubredoxin
APY30_17130	PF02581	Thiamine monophosphate synthase/TENI
APY30_17135	PF07715	TonB-dependent Receptor Plug Domain
APY30_17135	PF13620	Carboxypeptidase regulatory-like domain
APY30_17140	PF00202	Aminotransferase class-III
APY30_17145	PF00196	Bacterial regulatory proteins, luxR family
APY30_17145	PF13424	Tetratricopeptide repeat
APY30_17145	PF13481	AAA domain
APY30_17150	PF00127	Copper binding proteins, plastocyanin/azurin family
APY30_17155	PF00155	Aminotransferase class I and II
APY30_17160	PF01042	Endoribonuclease L-PSP
APY30_17165	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
APY30_17170	PF01593	Flavin containing amine oxidoreductase
APY30_17175	PF00593	TonB dependent receptor
APY30_17175	PF07715	TonB-dependent Receptor Plug Domain
APY30_17185	PF00202	Aminotransferase class-III
APY30_17190	PF00520	Ion transport protein
APY30_17195	PF00106	short chain dehydrogenase
APY30_17205	PF01569	PAP2 superfamily
APY30_17205	PF09335	APY30_17205
APY30_17205	PF14067	APY30_17205
APY30_17210	PF01062	APY30_17210
APY30_17215	PF02190	ATP-dependent protease La (LON) domain
APY30_17220	PF01225	Mur ligase family, catalytic domain
APY30_17220	PF02875	Mur ligase family, glutamate ligase domain
APY30_17220	PF08245	Mur ligase middle domain
APY30_17225	PF00406	Adenylate kinase
APY30_17230	PF00365	Phosphofructokinase
APY30_17240	PF00665	Integrase core domain
APY30_17240	PF13276	APY30_17240
APY30_17245	PF01527	Transposase
APY30_17250	PF03030	Inorganic H+ pyrophosphatase
APY30_17260	PF00719	Inorganic pyrophosphatase
APY30_17265	PF08668	HDOD domain
APY30_17270	PF00593	TonB dependent receptor
APY30_17270	PF07715	TonB-dependent Receptor Plug Domain
APY30_17275	PF12833	Helix-turn-helix domain
APY30_17280	PF00486	Transcriptional regulatory protein, C terminal
APY30_17280	PF07676	WD40-like Beta Propeller Repeat
APY30_17285	PF01964	ThiC family
APY30_17285	PF13667	ThiC-associated domain
APY30_17290	PF00593	TonB dependent receptor
APY30_17290	PF07715	TonB-dependent Receptor Plug Domain
APY30_17295	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
APY30_17300	PF01019	Gamma-glutamyltranspeptidase
APY30_17305	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
APY30_17305	PF07991	Acetohydroxy acid isomeroreductase, catalytic domain
APY30_17310	PF00205	Thiamine pyrophosphate enzyme, central domain
APY30_17310	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
APY30_17310	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
APY30_17315	PF13710	ACT domain
APY30_17320	PF00291	Pyridoxal-phosphate dependent enzyme
APY30_17325	PF00682	HMGL-like
APY30_17325	PF08502	LeuA allosteric (dimerisation) domain
APY30_17330	PF00180	Isocitrate/isopropylmalate dehydrogenase
APY30_17335	PF00694	Aconitase C-terminal domain
APY30_17340	PF00330	Aconitase family (aconitate hydratase)
APY30_17345	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
APY30_17345	PF03466	LysR substrate binding domain
APY30_17350	PF00990	GGDEF domain
APY30_17350	PF07494	Two component regulator propeller
APY30_17350	PF07495	Y_Y_Y domain
APY30_17355	PF00440	Bacterial regulatory proteins, tetR family
APY30_17355	PF14246	AefR-like transcriptional repressor, C-terminal region
APY30_17360	PF01135	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
APY30_17365	PF02321	Outer membrane efflux protein
APY30_17370	PF04413	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
APY30_17375	PF03279	APY30_17375
APY30_17380	PF04932	APY30_17380
APY30_17385	PF00534	Glycosyl transferases group 1
APY30_17385	PF13439	Glycosyltransferase Family 4
APY30_17390	PF10276	Zinc-finger domain
APY30_17400	PF00390	Malic enzyme, N-terminal domain
APY30_17400	PF01515	Phosphate acetyl/butaryl transferase
APY30_17400	PF03949	Malic enzyme, NAD binding domain
APY30_17405	PF00375	Sodium:dicarboxylate symporter family
APY30_17410	PF07396	Phosphate-selective porin O and P
APY30_17420	PF00072	Response regulator receiver domain
APY30_17420	PF00512	His Kinase A (phospho-acceptor) domain
APY30_17420	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_17420	PF02743	Cache domain
APY30_17420	PF12860	APY30_17420
APY30_17425	PF00083	Sugar (and other) transporter
APY30_17430	PF13531	Bacterial extracellular solute-binding protein
APY30_17435	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
APY30_17435	PF03466	LysR substrate binding domain
APY30_17445	PF00248	Aldo/keto reductase family
APY30_17450	PF12680	SnoaL-like domain
APY30_17455	PF11512	Agrobacterium tumefaciens protein Atu4866
APY30_17460	PF00072	Response regulator receiver domain
APY30_17460	PF00196	Bacterial regulatory proteins, luxR family
APY30_17465	PF13531	Bacterial extracellular solute-binding protein
APY30_17470	PF00512	His Kinase A (phospho-acceptor) domain
APY30_17470	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_17470	PF08521	APY30_17470
APY30_17475	PF00072	Response regulator receiver domain
APY30_17475	PF00486	Transcriptional regulatory protein, C terminal
APY30_17480	PF07396	Phosphate-selective porin O and P
APY30_17485	PF03600	Citrate transporter
APY30_17490	PF13561	Enoyl-(Acyl carrier protein) reductase
APY30_17495	PF00356	Bacterial regulatory proteins, lacI family
APY30_17495	PF13377	Periplasmic binding protein-like domain
APY30_17500	PF07690	Major Facilitator Superfamily
APY30_17505	PF00593	TonB dependent receptor
APY30_17505	PF07715	TonB-dependent Receptor Plug Domain
APY30_17510	PF00128	Alpha amylase, catalytic domain
APY30_17515	PF01965	DJ-1/PfpI family
APY30_17520	PF08014	APY30_17520
APY30_17525	PF03193	Protein of unknown function, DUF258
APY30_17530	PF00353	Hemolysin-type calcium-binding repeat (2 copies)
APY30_17540	PF00171	Aldehyde dehydrogenase family
APY30_17545	PF00501	AMP-binding enzyme
APY30_17545	PF13193	AMP-binding enzyme C-terminal domain
APY30_17550	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
APY30_17550	PF03466	LysR substrate binding domain
APY30_17555	PF07746	Aromatic-ring-opening dioxygenase LigAB, LigA subunit
APY30_17560	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
APY30_17565	PF00392	Bacterial regulatory proteins, gntR family
APY30_17565	PF07729	FCD domain
APY30_17570	PF13557	APY30_17570
APY30_17575	PF13577	SnoaL-like domain
APY30_17580	PF12697	Alpha/beta hydrolase family
APY30_17585	PF01494	FAD binding domain
APY30_17590	PF01494	FAD binding domain
APY30_17600	PF01923	Cobalamin adenosyltransferase
APY30_17605	PF00850	Histone deacetylase domain
APY30_17610	PF00850	Histone deacetylase domain
APY30_17615	PF03968	OstA-like protein
APY30_17615	PF04453	Organic solvent tolerance protein
APY30_17620	PF00639	PPIC-type PPIASE domain
APY30_17620	PF09312	SurA N-terminal domain
APY30_17620	PF13616	PPIC-type PPIASE domain
APY30_17625	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
APY30_17630	PF00398	Ribosomal RNA adenine dimethylase
APY30_17635	PF04379	Protein of unknown function (DUF525)
APY30_17640	PF00149	Calcineurin-like phosphoesterase
APY30_17645	PF00005	ABC transporter
APY30_17645	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
APY30_17650	PF00528	Binding-protein-dependent transport system inner membrane component
APY30_17655	PF00528	Binding-protein-dependent transport system inner membrane component
APY30_17660	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
APY30_17665	PF00296	Luciferase-like monooxygenase
APY30_17670	PF08028	Acyl-CoA dehydrogenase, C-terminal domain
APY30_17680	PF00593	TonB dependent receptor
APY30_17680	PF07715	TonB-dependent Receptor Plug Domain
APY30_17685	PF03358	NADPH-dependent FMN reductase
APY30_17690	PF00296	Luciferase-like monooxygenase
APY30_17695	PF09084	NMT1/THI5 like
APY30_17700	PF00528	Binding-protein-dependent transport system inner membrane component
APY30_17705	PF00005	ABC transporter
APY30_17710	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
APY30_17710	PF08028	Acyl-CoA dehydrogenase, C-terminal domain
APY30_17715	PF00158	Sigma-54 interaction domain
APY30_17720	PF00186	Dihydrofolate reductase
APY30_17730	PF00303	Thymidylate synthase
APY30_17735	PF01790	APY30_17735
APY30_17740	PF04536	TLP18
APY30_17745	PF04536	TLP18
APY30_17750	PF04011	LemA family
APY30_17755	PF01219	Prokaryotic diacylglycerol kinase
APY30_17760	PF13472	GDSL-like Lipase/Acylhydrolase family
APY30_17770	PF00072	Response regulator receiver domain
APY30_17770	PF00486	Transcriptional regulatory protein, C terminal
APY30_17775	PF13472	GDSL-like Lipase/Acylhydrolase family
APY30_17780	PF00005	ABC transporter
APY30_17785	PF02687	APY30_17785
APY30_17790	PF02668	Taurine catabolism dioxygenase TauD, TfdA family
APY30_17795	PF13379	NMT1-like family
APY30_17800	PF00005	ABC transporter
APY30_17805	PF00528	Binding-protein-dependent transport system inner membrane component
APY30_17810	PF04342	APY30_17810
APY30_17825	PF00593	TonB dependent receptor
APY30_17825	PF07715	TonB-dependent Receptor Plug Domain
APY30_17830	PF10636	Hemin uptake protein hemP
APY30_17835	PF00248	Aldo/keto reductase family
APY30_17840	PF01773	Na+ dependent nucleoside transporter N-terminus
APY30_17840	PF07662	Na+ dependent nucleoside transporter C-terminus
APY30_17840	PF07670	Nucleoside recognition
APY30_17845	PF00294	pfkB family carbohydrate kinase
APY30_17855	PF01207	Dihydrouridine synthase (Dus)
APY30_17860	PF08241	Methyltransferase domain
APY30_17865	PF04307	APY30_17865
APY30_17870	PF00438	S-adenosylmethionine synthetase, N-terminal domain
APY30_17870	PF02772	S-adenosylmethionine synthetase, central domain
APY30_17870	PF02773	S-adenosylmethionine synthetase, C-terminal domain
APY30_17875	PF00328	Histidine phosphatase superfamily (branch 2)
APY30_17880	PF00593	TonB dependent receptor
APY30_17880	PF07715	TonB-dependent Receptor Plug Domain
APY30_17895	PF13387	APY30_17895
APY30_17900	PF00440	Bacterial regulatory proteins, tetR family
APY30_17905	PF00311	Phosphoenolpyruvate carboxylase
APY30_17910	PF00326	Prolyl oligopeptidase family
APY30_17915	PF00670	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
APY30_17915	PF05221	S-adenosyl-L-homocysteine hydrolase
APY30_17925	PF00685	Sulfotransferase domain
APY30_17935	PF11539	Protein of unknown function (DUF3228)
APY30_17940	PF09831	APY30_17940
APY30_17950	PF00128	Alpha amylase, catalytic domain
APY30_17955	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
APY30_17975	PF08240	Alcohol dehydrogenase GroES-like domain
APY30_17975	PF13602	Zinc-binding dehydrogenase
APY30_17980	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
APY30_17985	PF02219	Methylenetetrahydrofolate reductase
APY30_17995	PF00293	NUDIX domain
APY30_17995	PF02581	Thiamine monophosphate synthase/TENI
APY30_18000	PF01043	SecA preprotein cross-linking domain
APY30_18000	PF02810	SEC-C motif
APY30_18000	PF07516	SecA Wing and Scaffold domain
APY30_18000	PF07517	SecA DEAD-like domain
APY30_18005	PF01551	Peptidase family M23
APY30_18010	PF05258	APY30_18010
APY30_18015	PF03331	UDP-3-O-acyl N-acetylglycosamine deacetylase
APY30_18020	PF00091	Tubulin/FtsZ family, GTPase domain
APY30_18020	PF12327	FtsZ family, C-terminal domain
APY30_18025	PF02491	SHS2 domain inserted in FTSA
APY30_18025	PF14450	Cell division protein FtsA
APY30_18030	PF03799	Cell division protein FtsQ
APY30_18030	PF08478	POTRA domain, FtsQ-type
APY30_18035	PF01820	D-ala D-ala ligase N-terminus
APY30_18035	PF07478	D-ala D-ala ligase C-terminus
APY30_18040	PF01225	Mur ligase family, catalytic domain
APY30_18040	PF02875	Mur ligase family, glutamate ligase domain
APY30_18040	PF08245	Mur ligase middle domain
APY30_18045	PF03033	Glycosyltransferase family 28 N-terminal domain
APY30_18045	PF04101	Glycosyltransferase family 28 C-terminal domain
APY30_18050	PF01098	APY30_18050
APY30_18055	PF00953	Glycosyl transferase family 4
APY30_18060	PF01225	Mur ligase family, catalytic domain
APY30_18060	PF02875	Mur ligase family, glutamate ligase domain
APY30_18060	PF08245	Mur ligase middle domain
APY30_18065	PF01225	Mur ligase family, catalytic domain
APY30_18065	PF02875	Mur ligase family, glutamate ligase domain
APY30_18065	PF08245	Mur ligase middle domain
APY30_18070	PF00905	Penicillin binding protein transpeptidase domain
APY30_18070	PF03717	Penicillin-binding Protein dimerisation domain
APY30_18075	PF04999	APY30_18075
APY30_18080	PF01795	MraW methylase family
APY30_18085	PF02381	MraZ protein
APY30_18090	PF05742	APY30_18090
APY30_18100	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
APY30_18105	PF04348	LppC putative lipoprotein
APY30_18110	PF02021	Uncharacterised protein family UPF0102
APY30_18115	PF04307	APY30_18115
APY30_18120	PF01565	FAD binding domain
APY30_18120	PF02913	FAD linked oxidases, C-terminal domain
APY30_18125	PF07007	Protein of unknown function (DUF1311)
APY30_18135	PF00072	Response regulator receiver domain
APY30_18135	PF00486	Transcriptional regulatory protein, C terminal
APY30_18140	PF00512	His Kinase A (phospho-acceptor) domain
APY30_18140	PF00582	Universal stress protein family
APY30_18140	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_18140	PF02702	Osmosensitive K+ channel His kinase sensor domain
APY30_18140	PF13493	Domain of unknown function (DUF4118)
APY30_18145	PF02669	APY30_18145
APY30_18150	PF00122	E1-E2 ATPase
APY30_18150	PF00702	haloacid dehalogenase-like hydrolase
APY30_18155	PF03814	APY30_18155
APY30_18160	PF09604	APY30_18160
APY30_18165	PF00646	F-box domain
APY30_18175	PF00586	AIR synthase related protein, N-terminal domain
APY30_18175	PF02769	AIR synthase related protein, C-terminal domain
APY30_18180	PF01029	NusB family
APY30_18185	PF00885	6,7-dimethyl-8-ribityllumazine synthase
APY30_18190	PF00925	GTP cyclohydrolase II
APY30_18190	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
APY30_18195	PF00677	Lumazine binding domain
APY30_18205	PF00665	Integrase core domain
APY30_18210	PF01527	Transposase
APY30_18215	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
APY30_18215	PF01872	RibD C-terminal domain
APY30_18220	PF00583	Acetyltransferase (GNAT) family
APY30_18225	PF03477	ATP cone domain
APY30_18230	PF00464	Serine hydroxymethyltransferase
APY30_18235	PF11776	Domain of unknown function (DUF3315)
APY30_18240	PF00005	ABC transporter
APY30_18240	PF12848	ABC transporter
APY30_18250	PF00892	EamA-like transporter family
APY30_18255	PF02567	Phenazine biosynthesis-like protein
APY30_18260	PF00155	Aminotransferase class I and II
APY30_18260	PF00392	Bacterial regulatory proteins, gntR family
APY30_18270	PF00756	Putative esterase
APY30_18275	PF04828	Glutathione-dependent formaldehyde-activating enzyme
APY30_18280	PF00107	Zinc-binding dehydrogenase
APY30_18280	PF08240	Alcohol dehydrogenase GroES-like domain
APY30_18285	PF02583	Metal-sensitive transcriptional repressor
APY30_18295	PF00534	Glycosyl transferases group 1
APY30_18300	PF00072	Response regulator receiver domain
APY30_18300	PF00486	Transcriptional regulatory protein, C terminal
APY30_18305	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_18310	PF04107	Glutamate-cysteine ligase family 2(GCS2)
APY30_18315	PF12833	Helix-turn-helix domain
APY30_18325	PF01926	50S ribosome-binding GTPase
APY30_18330	PF00034	Cytochrome c
APY30_18335	PF13462	Thioredoxin
APY30_18340	PF01323	DSBA-like thioredoxin domain
APY30_18345	PF03372	Endonuclease/Exonuclease/phosphatase family
APY30_18350	PF02028	BCCT family transporter
APY30_18355	PF00171	Aldehyde dehydrogenase family
APY30_18360	PF00732	GMC oxidoreductase
APY30_18360	PF05199	GMC oxidoreductase
APY30_18365	PF01743	Poly A polymerase head domain
APY30_18365	PF01966	HD domain
APY30_18365	PF12627	Probable RNA and SrmB- binding site of polymerase A
APY30_18370	PF00593	TonB dependent receptor
APY30_18370	PF07715	TonB-dependent Receptor Plug Domain
APY30_18375	PF01979	Amidohydrolase family
APY30_18380	PF01380	SIS domain
APY30_18385	PF00356	Bacterial regulatory proteins, lacI family
APY30_18385	PF13377	Periplasmic binding protein-like domain
APY30_18390	PF07690	Major Facilitator Superfamily
APY30_18395	PF00392	Bacterial regulatory proteins, gntR family
APY30_18395	PF07702	UTRA domain
APY30_18410	PF00703	Glycosyl hydrolases family 2
APY30_18410	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
APY30_18410	PF02837	Glycosyl hydrolases family 2, sugar binding domain
APY30_18410	PF16355	APY30_18410
APY30_18420	PF01203	APY30_18420
APY30_18425	PF04612	Type II secretion system (T2SS), protein M
APY30_18430	PF05134	Type II secretion system (T2SS), protein L
APY30_18435	PF03934	Type II secretion system (T2SS), protein K
APY30_18440	PF07963	Prokaryotic N-terminal methylation motif
APY30_18440	PF11612	Type II secretion system (T2SS), protein J
APY30_18445	PF02501	Type II secretion system (T2SS), protein I
APY30_18445	PF07963	Prokaryotic N-terminal methylation motif
APY30_18450	PF07963	Prokaryotic N-terminal methylation motif
APY30_18450	PF12019	Type II transport protein GspH
APY30_18455	PF07963	Prokaryotic N-terminal methylation motif
APY30_18455	PF08334	Type II secretion system (T2SS), protein G
APY30_18460	PF00482	Type II secretion system (T2SS), protein F
APY30_18465	PF00437	Type II/IV secretion system protein
APY30_18470	PF00263	APY30_18470
APY30_18470	PF03958	Bacterial type II/III secretion system short domain
APY30_18475	PF11356	Type IV pilus biogenesis
APY30_18475	PF13180	PDZ domain
APY30_18480	PF00593	TonB dependent receptor
APY30_18480	PF07715	TonB-dependent Receptor Plug Domain
APY30_18495	PF00593	TonB dependent receptor
APY30_18495	PF07715	TonB-dependent Receptor Plug Domain
APY30_18505	PF02636	Putative S-adenosyl-L-methionine-dependent methyltransferase
APY30_18510	PF13561	Enoyl-(Acyl carrier protein) reductase
APY30_18515	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
APY30_18520	PF00072	Response regulator receiver domain
APY30_18520	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_18525	PF00072	Response regulator receiver domain
APY30_18530	PF00512	His Kinase A (phospho-acceptor) domain
APY30_18530	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_18530	PF05227	CHASE3 domain
APY30_18530	PF13188	PAS domain
APY30_18535	PF04972	BON domain
APY30_18540	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
APY30_18540	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
APY30_18545	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
APY30_18545	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
APY30_18555	PF05433	APY30_18555
APY30_18560	PF10001	APY30_18560
APY30_18565	PF01555	DNA methylase
APY30_18575	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
APY30_18580	PF00293	NUDIX domain
APY30_18580	PF01467	Cytidylyltransferase
APY30_18585	PF03372	Endonuclease/Exonuclease/phosphatase family
APY30_18590	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
APY30_18590	PF03466	LysR substrate binding domain
APY30_18595	PF01925	APY30_18595
APY30_18600	PF00595	PDZ domain (Also known as DHR or GLGF)
APY30_18600	PF03572	Peptidase family S41
APY30_18600	PF11818	APY30_18600
APY30_18605	PF04055	Radical SAM superfamily
APY30_18605	PF16881	APY30_18605
APY30_18610	PF03099	Biotin/lipoate A/B protein ligase family
APY30_18615	PF04359	Protein of unknown function (DUF493)
APY30_18620	PF09982	Uncharacterized protein conserved in bacteria (DUF2219)
APY30_18625	PF00768	D-alanyl-D-alanine carboxypeptidase
APY30_18625	PF07943	Penicillin-binding protein 5, C-terminal domain
APY30_18635	PF03330	Rare lipoprotein A (RlpA)-like double-psi beta-barrel
APY30_18635	PF05036	Sporulation related domain
APY30_18640	PF13406	Transglycosylase SLT domain
APY30_18645	PF00295	Glycosyl hydrolases family 28
APY30_18650	PF01098	APY30_18650
APY30_18655	PF00905	Penicillin binding protein transpeptidase domain
APY30_18655	PF03717	Penicillin-binding Protein dimerisation domain
APY30_18660	PF04093	APY30_18660
APY30_18665	PF04085	rod shape-determining protein MreC
APY30_18670	PF06723	MreB/Mbl protein
APY30_18675	PF00294	pfkB family carbohydrate kinase
APY30_18680	PF00158	Sigma-54 interaction domain
APY30_18680	PF01590	GAF domain
APY30_18680	PF02954	Bacterial regulatory protein, Fis family
APY30_18685	PF00593	TonB dependent receptor
APY30_18685	PF07715	TonB-dependent Receptor Plug Domain
APY30_18690	PF00107	Zinc-binding dehydrogenase
APY30_18690	PF08240	Alcohol dehydrogenase GroES-like domain
APY30_18695	PF10282	Lactonase, 7-bladed beta-propeller
APY30_18700	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
APY30_18705	PF00497	Bacterial extracellular solute-binding proteins, family 3
APY30_18705	PF13857	Ankyrin repeats (many copies)
APY30_18710	PF13360	PQQ-like domain
APY30_18710	PF13570	PQQ-like domain
APY30_18715	PF00702	haloacid dehalogenase-like hydrolase
APY30_18730	PF01433	Peptidase family M1
APY30_18730	PF09127	Leukotriene A4 hydrolase, C-terminal
APY30_18735	PF00990	GGDEF domain
APY30_18740	PF01209	ubiE/COQ5 methyltransferase family
APY30_18745	PF07690	Major Facilitator Superfamily
APY30_18750	PF16576	APY30_18750
APY30_18755	PF13673	Acetyltransferase (GNAT) domain
APY30_18760	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
APY30_18765	PF00004	ATPase family associated with various cellular activities (AAA)
APY30_18765	PF07724	AAA domain (Cdc48 subfamily)
APY30_18765	PF10431	C-terminal, D2-small domain, of ClpB protein
APY30_18770	PF00227	Proteasome subunit
APY30_18775	PF00589	Phage integrase family
APY30_18775	PF02899	Phage integrase, N-terminal SAM-like domain
APY30_18785	PF04340	Protein of unknown function, DUF484
APY30_18790	PF01678	Diaminopimelate epimerase
APY30_18795	PF13627	APY30_18795
APY30_18800	PF04304	APY30_18800
APY30_18805	PF00326	Prolyl oligopeptidase family
APY30_18805	PF02897	Prolyl oligopeptidase, N-terminal beta-propeller domain
APY30_18810	PF00155	Aminotransferase class I and II
APY30_18820	PF00326	Prolyl oligopeptidase family
APY30_18820	PF02897	Prolyl oligopeptidase, N-terminal beta-propeller domain
APY30_18830	PF08212	Lipocalin-like domain
APY30_18835	PF08279	HTH domain
APY30_18835	PF13280	APY30_18835
APY30_18840	PF04338	Protein of unknown function, DUF481
APY30_18845	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
APY30_18845	PF03900	Porphobilinogen deaminase, C-terminal domain
APY30_18850	PF00072	Response regulator receiver domain
APY30_18850	PF04397	LytTr DNA-binding domain
APY30_18855	PF06580	APY30_18855
APY30_18860	PF02230	Phospholipase/Carboxylesterase
APY30_18865	PF13632	Glycosyl transferase family group 2
APY30_18875	PF02225	PA domain
APY30_18875	PF04389	Peptidase family M28
APY30_18880	PF00990	GGDEF domain
APY30_18885	PF00916	APY30_18885
APY30_18885	PF01740	STAS domain
APY30_18890	PF00150	Cellulase (glycosyl hydrolase family 5)
APY30_18890	PF00553	Cellulose binding domain
APY30_18895	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
APY30_18895	PF00672	HAMP domain
APY30_18895	PF17200	APY30_18895
APY30_18900	PF00990	GGDEF domain
APY30_18900	PF01590	GAF domain
APY30_18900	PF08447	PAS fold
APY30_18900	PF08448	PAS fold
APY30_18905	PF00675	Insulinase (Peptidase family M16)
APY30_18905	PF05193	Peptidase M16 inactive domain
APY30_18910	PF01590	GAF domain
APY30_18925	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
APY30_18925	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
APY30_18930	PF01904	Protein of unknown function DUF72
APY30_18935	PF01204	Trehalase
APY30_18940	PF01987	Mitochondrial biogenesis AIM24
APY30_18945	PF01544	CorA-like Mg2+ transporter protein
APY30_18955	PF00324	Amino acid permease
APY30_18965	PF00497	Bacterial extracellular solute-binding proteins, family 3
APY30_18970	PF00892	EamA-like transporter family
APY30_18975	PF05430	S-adenosyl-L-methionine-dependent methyltransferase
APY30_18990	PF00990	GGDEF domain
APY30_18995	PF07759	APY30_18995
APY30_19005	PF00326	Prolyl oligopeptidase family
APY30_19005	PF00930	Dipeptidyl peptidase IV (DPP IV) N-terminal region
APY30_19010	PF12823	APY30_19010
APY30_19015	PF05708	Orthopoxvirus protein of unknown function (DUF830)
APY30_19020	PF00756	Putative esterase
APY30_19025	PF00665	Integrase core domain
APY30_19025	PF13276	APY30_19025
APY30_19030	PF01527	Transposase
APY30_19040	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
APY30_19045	PF13409	Glutathione S-transferase, N-terminal domain
APY30_19045	PF13410	Glutathione S-transferase, C-terminal domain
APY30_19050	PF01145	SPFH domain / Band 7 family
APY30_19055	PF00106	short chain dehydrogenase
APY30_19055	PF13561	Enoyl-(Acyl carrier protein) reductase
APY30_19065	PF12833	Helix-turn-helix domain
APY30_19065	PF12852	Cupin
APY30_19070	PF00106	short chain dehydrogenase
APY30_19075	PF00665	Integrase core domain
APY30_19080	PF01527	Transposase
APY30_19085	PF07505	APY30_19085
APY30_19105	PF12760	Transposase zinc-ribbon domain
APY30_19105	PF12762	APY30_19105
APY30_19110	PF00456	Transketolase, thiamine diphosphate binding domain
APY30_19115	PF07745	Glycosyl hydrolase family 53
APY30_19120	PF01764	Lipase (class 3)
APY30_19130	PF00672	HAMP domain
APY30_19130	PF02743	Cache domain
APY30_19130	PF07228	Stage II sporulation protein E (SpoIIE)
APY30_19135	PF13581	Histidine kinase-like ATPase domain
APY30_19140	PF01740	STAS domain
APY30_19145	PF13419	Haloacid dehalogenase-like hydrolase
APY30_19150	PF00392	Bacterial regulatory proteins, gntR family
APY30_19150	PF07729	FCD domain
APY30_19155	PF03600	Citrate transporter
APY30_19155	PF07158	APY30_19155
APY30_19160	PF00698	Acyl transferase domain
APY30_19165	PF01874	ATP:dephospho-CoA triphosphoribosyl transferase
APY30_19170	PF10620	APY30_19170
APY30_19175	PF06833	Malonate decarboxylase gamma subunit (MdcE)
APY30_19180	PF01039	Carboxyl transferase domain
APY30_19185	PF06857	APY30_19185
APY30_19190	PF16957	APY30_19190
APY30_19195	PF03551	Transcriptional regulator PadR-like family
APY30_19200	PF04954	Siderophore-interacting protein
APY30_19200	PF08021	Siderophore-interacting FAD-binding domain
APY30_19205	PF00328	Histidine phosphatase superfamily (branch 2)
APY30_19215	PF04264	YceI-like domain
APY30_19220	PF00881	Nitroreductase family
APY30_19225	PF06258	APY30_19225
APY30_19230	PF09286	Pro-kumamolisin, activation domain
APY30_19240	PF02592	APY30_19240
APY30_19245	PF03710	Glutamate-ammonia ligase adenylyltransferase
APY30_19245	PF08335	GlnD PII-uridylyltransferase
APY30_19255	PF08450	SMP-30/Gluconolaconase/LRE-like region
APY30_19270	PF00793	DAHP synthetase I family
APY30_19285	PF00118	TCP-1/cpn60 chaperonin family
APY30_19290	PF00166	Chaperonin 10 Kd subunit
APY30_19295	PF04231	Endonuclease I
APY30_19295	PF13205	Bacterial Ig-like domain
APY30_19300	PF00106	short chain dehydrogenase
APY30_19310	PF01852	START domain
APY30_19320	PF12625	APY30_19320
APY30_19320	PF12833	Helix-turn-helix domain
APY30_19325	PF03091	CutA1 divalent ion tolerance protein
APY30_19330	PF02683	APY30_19330
APY30_19330	PF11412	Disulphide bond corrector protein DsbC
APY30_19330	PF13899	Thioredoxin-like
APY30_19335	PF01220	Dehydroquinase class II
APY30_19340	PF00364	Biotin-requiring enzyme
APY30_19345	PF05635	23S rRNA-intervening sequence protein
APY30_19350	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
APY30_19350	PF02785	Biotin carboxylase C-terminal domain
APY30_19350	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
APY30_19365	PF01527	Transposase
APY30_19370	PF00665	Integrase core domain
APY30_19370	PF13276	APY30_19370
APY30_19375	PF06325	Ribosomal protein L11 methyltransferase (PrmA)
APY30_19385	PF01381	Helix-turn-helix
APY30_19395	PF11906	APY30_19395
APY30_19400	PF02954	Bacterial regulatory protein, Fis family
APY30_19405	PF01148	Cytidylyltransferase family
APY30_19410	PF01553	Acyltransferase
APY30_19415	PF01066	CDP-alcohol phosphatidyltransferase
APY30_19430	PF00782	Dual specificity phosphatase, catalytic domain
APY30_19435	PF12146	Putative lysophospholipase
APY30_19435	PF12147	APY30_19435
APY30_19440	PF01066	CDP-alcohol phosphatidyltransferase
APY30_19445	PF01808	AICARFT/IMPCHase bienzyme
APY30_19445	PF02142	MGS-like domain
APY30_19455	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
APY30_19455	PF02843	Phosphoribosylglycinamide synthetase, C domain
APY30_19455	PF02844	Phosphoribosylglycinamide synthetase, N domain
APY30_19465	PF12805	APY30_19465
APY30_19465	PF13515	APY30_19465
APY30_19470	PF07690	Major Facilitator Superfamily
APY30_19475	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
APY30_19475	PF03466	LysR substrate binding domain
APY30_19480	PF01553	Acyltransferase
APY30_19480	PF07690	Major Facilitator Superfamily
APY30_19490	PF10825	APY30_19490
APY30_19495	PF03186	APY30_19495
APY30_19500	PF00293	NUDIX domain
APY30_19500	PF09296	NADH pyrophosphatase-like rudimentary NUDIX domain
APY30_19500	PF09297	NADH pyrophosphatase zinc ribbon domain
APY30_19505	PF03583	Secretory lipase
APY30_19515	PF01521	Iron-sulphur cluster biosynthesis
APY30_19520	PF04519	APY30_19520
APY30_19530	PF13548	APY30_19530
APY30_19535	PF00072	Response regulator receiver domain
APY30_19535	PF00563	EAL domain
APY30_19535	PF00990	GGDEF domain
APY30_19540	PF00072	Response regulator receiver domain
APY30_19540	PF00512	His Kinase A (phospho-acceptor) domain
APY30_19540	PF01627	Hpt domain
APY30_19540	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_19545	PF00210	Ferritin-like domain
APY30_19550	PF04324	BFD-like [2Fe-2S] binding domain
APY30_19555	PF00293	NUDIX domain
APY30_19570	PF00380	Ribosomal protein S9/S16
APY30_19575	PF00572	Ribosomal protein L13
APY30_19580	PF03232	APY30_19580
APY30_19585	PF00893	Small Multidrug Resistance protein
APY30_19590	PF02675	S-adenosylmethionine decarboxylase
APY30_19595	PF00027	Cyclic nucleotide-binding domain
APY30_19595	PF00325	Bacterial regulatory proteins, crp family
APY30_19600	PF12710	haloacid dehalogenase-like hydrolase
APY30_19605	PF00218	Indole-3-glycerol phosphate synthase
APY30_19610	PF00591	Glycosyl transferase family, a/b domain
APY30_19610	PF02885	Glycosyl transferase family, helical bundle domain
APY30_19615	PF01613	Flavin reductase like domain
APY30_19620	PF00117	Glutamine amidotransferase class-I
APY30_19630	PF00425	chorismate binding enzyme
APY30_19630	PF04715	Anthranilate synthase component I, N terminal region
APY30_19635	PF00781	Diacylglycerol kinase catalytic domain
APY30_19640	PF00583	Acetyltransferase (GNAT) family
APY30_19645	PF00834	Ribulose-phosphate 3 epimerase family
APY30_19650	PF13505	Outer membrane protein beta-barrel domain
APY30_19655	PF00226	DnaJ domain
APY30_19660	PF01259	SAICAR synthetase
APY30_19685	PF00665	Integrase core domain
APY30_19685	PF13276	APY30_19685
APY30_19690	PF01527	Transposase
APY30_19700	PF01447	Thermolysin metallopeptidase, catalytic domain
APY30_19700	PF02868	Thermolysin metallopeptidase, alpha-helical domain
APY30_19700	PF07504	Fungalysin/Thermolysin Propeptide Motif
APY30_19705	PF06127	APY30_19705
APY30_19710	PF01370	NAD dependent epimerase/dehydratase family
APY30_19715	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
APY30_19715	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
APY30_19715	PF04039	APY30_19715
APY30_19715	PF13244	APY30_19715
APY30_19720	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
APY30_19725	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
APY30_19730	PF01899	APY30_19730
APY30_19735	PF04066	APY30_19735
APY30_19740	PF03334	APY30_19740
APY30_19755	PF04209	homogentisate 1,2-dioxygenase
APY30_19760	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
APY30_19760	PF14696	Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal
APY30_19765	PF12802	MarR family
APY30_19770	PF13899	Thioredoxin-like
APY30_19775	PF00854	POT family
APY30_19780	PF03301	Tryptophan 2,3-dioxygenase
APY30_19785	PF00932	Lamin Tail Domain
APY30_19785	PF03160	Calx-beta domain
APY30_19785	PF03372	Endonuclease/Exonuclease/phosphatase family
APY30_19790	PF00676	Dehydrogenase E1 component
APY30_19795	PF02779	Transketolase, pyrimidine binding domain
APY30_19795	PF02780	Transketolase, C-terminal domain
APY30_19800	PF07653	Variant SH3 domain
APY30_19805	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
APY30_19805	PF00364	Biotin-requiring enzyme
APY30_19805	PF02817	e3 binding domain
APY30_19810	PF00270	DEAD/DEAH box helicase
APY30_19810	PF00271	Helicase conserved C-terminal domain
APY30_19820	PF00106	short chain dehydrogenase
APY30_19825	PF00873	AcrB/AcrD/AcrF family
APY30_19835	PF00440	Bacterial regulatory proteins, tetR family
APY30_19845	PF06903	APY30_19845
APY30_19855	PF00890	FAD binding domain
APY30_19855	PF13454	FAD-NAD(P)-binding
APY30_19860	PF13561	Enoyl-(Acyl carrier protein) reductase
APY30_19865	PF13460	NADH(P)-binding
APY30_19870	PF00128	Alpha amylase, catalytic domain
APY30_19870	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
APY30_19875	PF11154	APY30_19875
APY30_19880	PF00128	Alpha amylase, catalytic domain
APY30_19885	PF02446	4-alpha-glucanotransferase
APY30_19890	PF00128	Alpha amylase, catalytic domain
APY30_19890	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
APY30_19890	PF11941	Domain of unknown function (DUF3459)
APY30_19895	PF00128	Alpha amylase, catalytic domain
APY30_19895	PF02806	Alpha amylase, C-terminal all-beta domain
APY30_19895	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
APY30_19900	PF00534	Glycosyl transferases group 1
APY30_19900	PF08323	Starch synthase catalytic domain
APY30_19905	PF00990	GGDEF domain
APY30_19910	PF05661	APY30_19910
APY30_19915	PF03109	APY30_19915
APY30_19920	PF00884	Sulfatase
APY30_19925	PF00924	Mechanosensitive ion channel
APY30_19925	PF12607	APY30_19925
APY30_19930	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
APY30_19945	PF01464	Transglycosylase SLT domain
APY30_19955	PF00263	APY30_19955
APY30_19955	PF03958	Bacterial type II/III secretion system short domain
APY30_19960	PF01311	APY30_19960
APY30_19965	PF09486	APY30_19965
APY30_19970	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
APY30_19970	PF02874	ATP synthase alpha/beta family, beta-barrel domain
APY30_19975	PF02108	APY30_19975
APY30_19980	PF09502	APY30_19980
APY30_19985	PF01514	Secretory protein of YscJ/FliF family
APY30_19990	PF09487	APY30_19990
APY30_19995	PF09613	APY30_19995
APY30_20000	PF01312	FlhB HrpN YscU SpaS Family
APY30_20005	PF00771	FHIPEP family
APY30_20010	PF09483	APY30_20010
APY30_20015	PF01052	Surface presentation of antigens (SPOA)
APY30_20020	PF00813	APY30_20020
APY30_20025	PF01313	APY30_20025
APY30_20050	PF05932	Tir chaperone protein (CesT) family
APY30_20060	PF05819	APY30_20060
APY30_20070	PF01040	UbiA prenyltransferase family
APY30_20075	PF00156	Phosphoribosyl transferase domain
APY30_20080	PF04055	Radical SAM superfamily
APY30_20080	PF06968	Biotin and Thiamin Synthesis associated domain
APY30_20085	PF00155	Aminotransferase class I and II
APY30_20095	PF12697	Alpha/beta hydrolase family
APY30_20100	PF13561	Enoyl-(Acyl carrier protein) reductase
APY30_20105	PF08241	Methyltransferase domain
APY30_20110	PF05118	Aspartyl/Asparaginyl beta-hydroxylase
APY30_20115	PF12680	SnoaL-like domain
APY30_20120	PF02698	DUF218 domain
APY30_20125	PF00291	Pyridoxal-phosphate dependent enzyme
APY30_20135	PF01134	Glucose inhibited division protein A
APY30_20135	PF13932	GidA associated domain 3
APY30_20140	PF10677	APY30_20140
APY30_20150	PF01163	RIO1 family
APY30_20155	PF01614	Bacterial transcriptional regulator
APY30_20155	PF09339	IclR helix-turn-helix domain
APY30_20160	PF12146	Putative lysophospholipase
APY30_20165	PF02627	Carboxymuconolactone decarboxylase family
APY30_20170	PF00561	alpha/beta hydrolase fold
APY30_20175	PF00206	Lyase
APY30_20175	PF10397	Adenylosuccinate lyase C-terminus
APY30_20180	PF00775	Dioxygenase
APY30_20190	PF00108	Thiolase, N-terminal domain
APY30_20190	PF02803	Thiolase, C-terminal domain
APY30_20195	PF01144	Coenzyme A transferase
APY30_20200	PF01144	Coenzyme A transferase
APY30_20205	PF00355	Rieske [2Fe-2S] domain
APY30_20210	PF00111	2Fe-2S iron-sulfur cluster binding domain
APY30_20210	PF00175	Oxidoreductase NAD-binding domain
APY30_20210	PF00970	Oxidoreductase FAD-binding domain
APY30_20215	PF00455	APY30_20215
APY30_20215	PF08220	DeoR-like helix-turn-helix domain
APY30_20220	PF01266	FAD dependent oxidoreductase
APY30_20220	PF16901	APY30_20220
APY30_20225	PF00230	Major intrinsic protein
APY30_20230	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
APY30_20230	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
APY30_20235	PF12680	SnoaL-like domain
APY30_20240	PF01494	FAD binding domain
APY30_20245	PF02311	AraC-like ligand binding domain
APY30_20245	PF12833	Helix-turn-helix domain
APY30_20250	PF00171	Aldehyde dehydrogenase family
APY30_20255	PF00106	short chain dehydrogenase
APY30_20255	PF13561	Enoyl-(Acyl carrier protein) reductase
APY30_20260	PF13557	APY30_20260
APY30_20265	PF12802	MarR family
APY30_20270	PF11871	APY30_20270
APY30_20270	PF13487	HD domain
APY30_20275	PF07690	Major Facilitator Superfamily
APY30_20285	PF00132	Bacterial transferase hexapeptide (six repeats)
APY30_20300	PF00150	Cellulase (glycosyl hydrolase family 5)
APY30_20305	PF00920	Dehydratase family
APY30_20310	PF00589	Phage integrase family
APY30_20315	PF14085	APY30_20315
APY30_20320	PF00665	Integrase core domain
APY30_20320	PF13276	APY30_20320
APY30_20325	PF01527	Transposase
APY30_20335	PF08327	Activator of Hsp90 ATPase homolog 1-like protein
APY30_20340	PF00665	Integrase core domain
APY30_20345	PF01527	Transposase
APY30_20360	PF01638	HxlR-like helix-turn-helix
APY30_20365	PF05368	NmrA-like family
APY30_20380	PF07396	Phosphate-selective porin O and P
APY30_20385	PF03812	APY30_20385
APY30_20390	PF01717	Cobalamin-independent synthase, Catalytic domain
APY30_20395	PF08908	APY30_20395
APY30_20400	PF03358	NADPH-dependent FMN reductase
APY30_20405	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
APY30_20405	PF03466	LysR substrate binding domain
APY30_20410	PF02677	APY30_20410
APY30_20415	PF02219	Methylenetetrahydrofolate reductase
APY30_20425	PF02321	Outer membrane efflux protein
APY30_20435	PF16576	APY30_20435
APY30_20440	PF00512	His Kinase A (phospho-acceptor) domain
APY30_20440	PF00672	HAMP domain
APY30_20440	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_20445	PF00072	Response regulator receiver domain
APY30_20445	PF00486	Transcriptional regulatory protein, C terminal
APY30_20450	PF00551	Formyl transferase
APY30_20450	PF01842	ACT domain
APY30_20460	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
APY30_20460	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
APY30_20465	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
APY30_20470	PF02146	Sir2 family
APY30_20475	PF12697	Alpha/beta hydrolase family
APY30_20480	PF13411	MerR HTH family regulatory protein
APY30_20485	PF07690	Major Facilitator Superfamily
APY30_20495	PF01527	Transposase
APY30_20500	PF13276	APY30_20500
APY30_20500	PF13683	APY30_20500
APY30_20515	PF01026	TatD related DNase
APY30_20520	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
APY30_20520	PF03466	LysR substrate binding domain
APY30_20525	PF00355	Rieske [2Fe-2S] domain
APY30_20530	PF00111	2Fe-2S iron-sulfur cluster binding domain
APY30_20530	PF00970	Oxidoreductase FAD-binding domain
APY30_20535	PF00860	Permease family
APY30_20540	PF00962	Adenosine/AMP deaminase
APY30_20545	PF01156	Inosine-uridine preferring nucleoside hydrolase
APY30_20550	PF01425	Amidase
APY30_20555	PF01019	Gamma-glutamyltranspeptidase
APY30_20565	PF07690	Major Facilitator Superfamily
APY30_20570	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
APY30_20570	PF03466	LysR substrate binding domain
APY30_20575	PF01546	Peptidase family M20/M25/M40
APY30_20575	PF07687	Peptidase dimerisation domain
APY30_20580	PF00266	Aminotransferase class-V
APY30_20585	PF01522	Polysaccharide deacetylase
APY30_20590	PF11533	Protein of unknown function (DUF3225)
APY30_20595	PF09349	OHCU decarboxylase
APY30_20600	PF13738	Pyridine nucleotide-disulphide oxidoreductase
APY30_20605	PF00576	HIUase/Transthyretin family
APY30_20610	PF07308	APY30_20610
APY30_20615	PF00271	Helicase conserved C-terminal domain
APY30_20615	PF04408	Helicase associated domain (HA2)
APY30_20615	PF08482	APY30_20615
APY30_20625	PF00593	TonB dependent receptor
APY30_20625	PF07715	TonB-dependent Receptor Plug Domain
APY30_20625	PF13620	Carboxypeptidase regulatory-like domain
APY30_20630	PF00849	RNA pseudouridylate synthase
APY30_20640	PF00248	Aldo/keto reductase family
APY30_20645	PF00107	Zinc-binding dehydrogenase
APY30_20645	PF16884	APY30_20645
APY30_20665	PF12697	Alpha/beta hydrolase family
APY30_20675	PF02566	OsmC-like protein
APY30_20680	PF01047	MarR family
APY30_20685	PF03969	AFG1-like ATPase
APY30_20690	PF12146	Putative lysophospholipase
APY30_20715	PF03203	APY30_20715
APY30_20730	PF00589	Phage integrase family
APY30_20755	PF01471	Putative peptidoglycan binding domain
APY30_20755	PF06414	Zeta toxin
APY30_20765	PF02534	Type IV secretory system Conjugative DNA transfer
APY30_20770	PF13560	Helix-turn-helix domain
APY30_20800	PF13271	APY30_20800
APY30_20810	PF01381	Helix-turn-helix
APY30_20810	PF06114	Domain of unknown function (DUF955)
APY30_20825	PF07804	HipA-like C-terminal domain
APY30_20825	PF13657	HipA N-terminal domain
APY30_20830	PF12796	Ankyrin repeats (3 copies)
APY30_20850	PF02794	APY30_20850
APY30_20860	PF00816	H-NS histone family
APY30_20865	PF00589	Phage integrase family
APY30_20870	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
APY30_20880	PF12365	APY30_20880
APY30_20885	PF03929	APY30_20885
APY30_20890	PF11804	APY30_20890
APY30_20895	PF08808	APY30_20895
APY30_20905	PF00440	Bacterial regulatory proteins, tetR family
APY30_20910	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
APY30_20910	PF02770	Acyl-CoA dehydrogenase, middle domain
APY30_20910	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
APY30_20915	PF01039	Carboxyl transferase domain
APY30_20920	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
APY30_20920	PF00364	Biotin-requiring enzyme
APY30_20920	PF02785	Biotin carboxylase C-terminal domain
APY30_20920	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
APY30_20925	PF00326	Prolyl oligopeptidase family
APY30_20930	PF00881	Nitroreductase family
APY30_20940	PF13174	Tetratricopeptide repeat
APY30_20940	PF14559	Tetratricopeptide repeat
APY30_20945	PF00027	Cyclic nucleotide-binding domain
APY30_20945	PF00990	GGDEF domain
APY30_20950	PF00463	Isocitrate lyase family
APY30_20955	PF01274	Malate synthase
APY30_20960	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
APY30_20960	PF03466	LysR substrate binding domain
APY30_20965	PF00999	Sodium/hydrogen exchanger family
APY30_20970	PF12833	Helix-turn-helix domain
APY30_20975	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
APY30_20980	PF00440	Bacterial regulatory proteins, tetR family
APY30_20980	PF14246	AefR-like transcriptional repressor, C-terminal region
APY30_20990	PF12706	Beta-lactamase superfamily domain
APY30_20995	PF01432	Peptidase family M3
APY30_21000	PF01112	Asparaginase
APY30_21005	PF01553	Acyltransferase
APY30_21010	PF00472	RF-1 domain
APY30_21015	PF09832	Uncharacterized protein conserved in bacteria (DUF2059)
APY30_21020	PF00849	RNA pseudouridylate synthase
APY30_21025	PF07883	Cupin domain
APY30_21030	PF03109	APY30_21030
APY30_21035	PF02036	SCP-2 sterol transfer family
APY30_21040	PF01820	D-ala D-ala ligase N-terminus
APY30_21040	PF07478	D-ala D-ala ligase C-terminus
APY30_21050	PF07043	APY30_21050
APY30_21055	PF01073	3-beta hydroxysteroid dehydrogenase/isomerase family
APY30_21060	PF00501	AMP-binding enzyme
APY30_21065	PF03692	APY30_21065
APY30_21070	PF00561	alpha/beta hydrolase fold
APY30_21080	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
APY30_21080	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
APY30_21085	PF13698	APY30_21085
APY30_21095	PF00588	SpoU rRNA Methylase family
APY30_21100	PF07690	Major Facilitator Superfamily
APY30_21115	PF00072	Response regulator receiver domain
APY30_21115	PF00158	Sigma-54 interaction domain
APY30_21115	PF02954	Bacterial regulatory protein, Fis family
APY30_21120	PF00512	His Kinase A (phospho-acceptor) domain
APY30_21120	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_21125	PF00205	Thiamine pyrophosphate enzyme, central domain
APY30_21125	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
APY30_21125	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
APY30_21135	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
APY30_21135	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
APY30_21140	PF02556	Preprotein translocase subunit SecB
APY30_21145	PF00581	Rhodanese-like domain
APY30_21155	PF09500	Putative thioesterase (yiiD_Cterm)
APY30_21160	PF01755	APY30_21160
APY30_21165	PF02602	Uroporphyrinogen-III synthase HemD
APY30_21170	PF04375	APY30_21170
APY30_21175	PF07219	APY30_21175
APY30_21180	PF00108	Thiolase, N-terminal domain
APY30_21180	PF02803	Thiolase, C-terminal domain
APY30_21195	PF00080	Copper/zinc superoxide dismutase (SODC)
APY30_21200	PF00080	Copper/zinc superoxide dismutase (SODC)
APY30_21205	PF00072	Response regulator receiver domain
APY30_21205	PF00158	Sigma-54 interaction domain
APY30_21205	PF02954	Bacterial regulatory protein, Fis family
APY30_21210	PF00512	His Kinase A (phospho-acceptor) domain
APY30_21210	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APY30_21215	PF00909	Ammonium Transporter Family
APY30_21220	PF00543	Nitrogen regulatory protein P-II
APY30_21225	PF00120	Glutamine synthetase, catalytic domain
APY30_21225	PF03951	Glutamine synthetase, beta-Grasp domain
APY30_21230	PF02673	APY30_21230
APY30_21235	PF03724	META domain
APY30_21235	PF14302	APY30_21235
APY30_21240	PF01161	Phosphatidylethanolamine-binding protein
APY30_21245	PF13432	Tetratricopeptide repeat
APY30_21255	PF12146	Putative lysophospholipase
APY30_21260	PF01553	Acyltransferase
APY30_21265	PF03061	Thioesterase superfamily
APY30_21270	PF13091	PLD-like domain
APY30_21275	PF04264	YceI-like domain
APY30_21280	PF00300	Histidine phosphatase superfamily (branch 1)
APY30_21285	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
APY30_21295	PF03547	APY30_21295
APY30_21305	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
APY30_21310	PF13560	Helix-turn-helix domain
APY30_21320	PF11625	Protein of unknown function (DUF3253)
APY30_21325	PF10017	APY30_21325
APY30_21330	PF03781	Sulfatase-modifying factor enzyme 1
APY30_21330	PF12867	DinB superfamily
APY30_21335	PF00266	Aminotransferase class-V
APY30_21340	PF00528	Binding-protein-dependent transport system inner membrane component
APY30_21340	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
APY30_21345	PF00005	ABC transporter
APY30_21350	PF13202	EF hand
APY30_21360	PF00005	ABC transporter
APY30_21365	PF01987	Mitochondrial biogenesis AIM24
APY30_21370	PF01734	Patatin-like phospholipase
APY30_21375	PF00593	TonB dependent receptor
APY30_21375	PF07715	TonB-dependent Receptor Plug Domain
APY30_21380	PF01037	AsnC family
APY30_21380	PF13404	AsnC-type helix-turn-helix domain
APY30_21385	PF00351	Biopterin-dependent aromatic amino acid hydroxylase
APY30_21390	PF14300	Domain of unknown function (DUF4375)
APY30_21395	PF05299	M61 glycyl aminopeptidase
APY30_21400	PF07883	Cupin domain
APY30_21400	PF13472	GDSL-like Lipase/Acylhydrolase family
APY30_21405	PF02502	Ribose/Galactose Isomerase
APY30_21405	PF12408	Ribose-5-phosphate isomerase
APY30_21410	PF13561	Enoyl-(Acyl carrier protein) reductase
APY30_21415	PF04962	KduI/IolB family
APY30_21420	PF00356	Bacterial regulatory proteins, lacI family
APY30_21420	PF13377	Periplasmic binding protein-like domain
APY30_21425	PF04616	Glycosyl hydrolases family 43
APY30_21430	PF06808	APY30_21430
APY30_21435	PF04290	APY30_21435
APY30_21440	PF03480	Bacterial extracellular solute-binding protein, family 7
APY30_21450	PF07859	alpha/beta hydrolase fold
APY30_21455	PF00135	Carboxylesterase family
APY30_21460	PF00248	Aldo/keto reductase family
APY30_21480	PF04357	APY30_21480
APY30_21485	PF01103	Surface antigen
APY30_21485	PF07244	Surface antigen variable number repeat
APY30_21485	PF17243	APY30_21485
APY30_21490	PF00593	TonB dependent receptor
APY30_21490	PF07715	TonB-dependent Receptor Plug Domain
APY30_21495	PF13469	Sulfotransferase family
APY30_21500	PF02092	APY30_21500
APY30_21500	PF05746	DALR anticodon binding domain
APY30_21505	PF02091	Glycyl-tRNA synthetase alpha subunit
APY30_21510	PF00437	Type II/IV secretion system protein
APY30_21510	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
APY30_21520	PF00117	Glutamine amidotransferase class-I
APY30_21530	PF00902	Sec-independent protein translocase protein (TatC)
APY30_21535	PF02416	mttA/Hcf106 family
APY30_21540	PF02416	mttA/Hcf106 family
APY30_21545	PF04366	APY30_21545
APY30_21550	PF00762	Ferrochelatase
APY30_21555	PF00561	alpha/beta hydrolase fold
APY30_21565	PF01863	Protein of unknown function DUF45
APY30_21570	PF04381	Putative exonuclease, RdgC
APY30_21575	PF01171	PP-loop family
APY30_21585	PF00356	Bacterial regulatory proteins, lacI family
APY30_21585	PF13377	Periplasmic binding protein-like domain
APY30_21590	PF03648	Glycosyl hydrolase family 67 N-terminus
APY30_21590	PF07477	Glycosyl hydrolase family 67 C-terminus
APY30_21590	PF07488	Glycosyl hydrolase family 67 middle domain
APY30_21595	PF02837	Glycosyl hydrolases family 2, sugar binding domain
APY30_21595	PF03629	Domain of unknown function (DUF303)
APY30_21600	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
APY30_21600	PF13378	Enolase C-terminal domain-like
APY30_21605	PF04616	Glycosyl hydrolases family 43
APY30_21610	PF00933	Glycosyl hydrolase family 3 N terminal domain
APY30_21610	PF01915	Glycosyl hydrolase family 3 C-terminal domain
APY30_21610	PF07691	PA14 domain
APY30_21610	PF14310	Fibronectin type III-like domain
APY30_21615	PF01232	Mannitol dehydrogenase Rossmann domain
APY30_21615	PF08125	Mannitol dehydrogenase C-terminal domain
APY30_21635	PF00440	Bacterial regulatory proteins, tetR family
APY30_21640	PF00171	Aldehyde dehydrogenase family
APY30_21655	PF00202	Aminotransferase class-III
APY30_21660	PF00596	Class II Aldolase and Adducin N-terminal domain
APY30_21665	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
APY30_21665	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
APY30_21670	PF09694	APY30_21670
APY30_21675	PF09917	Uncharacterized protein conserved in bacteria (DUF2147)
APY30_21680	PF08450	SMP-30/Gluconolaconase/LRE-like region
APY30_21685	PF00331	Glycosyl hydrolase family 10
APY30_21690	PF00703	Glycosyl hydrolases family 2
APY30_21690	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
APY30_21690	PF02837	Glycosyl hydrolases family 2, sugar binding domain
APY30_21690	PF16355	APY30_21690
APY30_21695	PF02614	Glucuronate isomerase
APY30_21710	PF00331	Glycosyl hydrolase family 10
APY30_21715	PF07690	Major Facilitator Superfamily
APY30_21720	PF00593	TonB dependent receptor
APY30_21720	PF07715	TonB-dependent Receptor Plug Domain
APY30_21725	PF13347	MFS/sugar transport protein
APY30_21730	PF04616	Glycosyl hydrolases family 43
APY30_21735	PF08212	Lipocalin-like domain
APY30_21740	PF06877	Regulator of ribonuclease activity B
APY30_21755	PF01527	Transposase
APY30_21760	PF13276	APY30_21760
APY30_21760	PF13683	APY30_21760
APY30_21770	PF03235	APY30_21770
APY30_21780	PF04325	Protein of unknown function (DUF465)
APY30_21785	PF00107	Zinc-binding dehydrogenase
APY30_21785	PF08240	Alcohol dehydrogenase GroES-like domain
APY30_21790	PF01553	Acyltransferase
APY30_21800	PF00356	Bacterial regulatory proteins, lacI family
APY30_21800	PF13377	Periplasmic binding protein-like domain
APY30_21805	PF00593	TonB dependent receptor
APY30_21805	PF13620	Carboxypeptidase regulatory-like domain
APY30_21815	PF00593	TonB dependent receptor
APY30_21820	PF04820	Tryptophan halogenase
APY30_21825	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
APY30_21830	PF03767	HAD superfamily, subfamily IIIB (Acid phosphatase)
APY30_21835	PF04337	Protein of unknown function, DUF480
APY30_21840	PF14094	APY30_21840
APY30_21845	PF13302	Acetyltransferase (GNAT) domain
APY30_21850	PF00580	UvrD/REP helicase N-terminal domain
APY30_21850	PF13361	UvrD-like helicase C-terminal domain
APY30_21855	PF00265	Thymidine kinase
APY30_21860	PF00512	His Kinase A (phospho-acceptor) domain
APY30_21860	PF01590	GAF domain
APY30_21865	PF04349	Periplasmic glucan biosynthesis protein, MdoG
APY30_21870	PF14315	APY30_21870
APY30_21875	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
APY30_21875	PF06827	Zinc finger found in FPG and IleRS
APY30_21875	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
APY30_21910	PF00360	Phytochrome region
APY30_21910	PF01590	GAF domain
APY30_21910	PF08446	PAS fold
APY30_21910	PF08448	PAS fold
APY30_21915	PF01126	Heme oxygenase
APY30_21920	PF07690	Major Facilitator Superfamily
APY30_21925	PF01263	Aldose 1-epimerase
APY30_21925	PF01471	Putative peptidoglycan binding domain
APY30_21925	PF13406	Transglycosylase SLT domain
APY30_21940	PF01925	APY30_21940
APY30_21945	PF13555	P-loop containing region of AAA domain
APY30_21945	PF13558	Putative exonuclease SbcCD, C subunit
APY30_21950	PF13835	APY30_21950
APY30_21955	PF11855	APY30_21955
APY30_21960	PF01227	GTP cyclohydrolase I
APY30_21965	PF12802	MarR family
APY30_21970	PF07869	APY30_21970
APY30_21975	PF13437	HlyD family secretion protein
APY30_21975	PF13533	Biotin-lipoyl like
APY30_21980	PF02321	Outer membrane efflux protein
APY30_21985	PF04632	APY30_21985
APY30_21990	PF00083	Sugar (and other) transporter
APY30_21995	PF13091	PLD-like domain
APY30_22010	PF05016	Plasmid stabilisation system protein
APY30_22015	PF03869	Arc-like DNA binding domain
APY30_22020	PF01527	Transposase
APY30_22025	PF00665	Integrase core domain
APY30_22030	PF01850	PIN domain
APY30_22035	PF00756	Putative esterase
APY30_22040	PF09722	APY30_22040
APY30_22055	PF00849	RNA pseudouridylate synthase
APY30_22060	PF01527	Transposase
APY30_22065	PF00665	Integrase core domain
APY30_22065	PF13276	APY30_22065
APY30_22070	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
APY30_22070	PF00364	Biotin-requiring enzyme
APY30_22070	PF02626	Allophanate hydrolase subunit 2
APY30_22070	PF02682	Allophanate hydrolase subunit 1
APY30_22070	PF02785	Biotin carboxylase C-terminal domain
APY30_22070	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
APY30_22075	PF01425	Amidase
APY30_22100	PF13245	Part of AAA domain
APY30_22100	PF13538	UvrD-like helicase C-terminal domain
APY30_22105	PF00580	UvrD/REP helicase N-terminal domain
APY30_22105	PF12705	PD-(D/E)XK nuclease superfamily
APY30_22105	PF13361	UvrD-like helicase C-terminal domain
APY30_22110	PF04257	Exodeoxyribonuclease V, gamma subunit
APY30_22125	PF00005	ABC transporter
APY30_22130	PF02405	APY30_22130
APY30_22135	PF02470	APY30_22135
APY30_22140	PF05494	Toluene tolerance, Ttg2
APY30_22145	PF13466	STAS domain
APY30_22150	PF04333	APY30_22150
APY30_22160	PF00255	Glutathione peroxidase
APY30_22170	PF02646	APY30_22170
APY30_22175	PF08240	Alcohol dehydrogenase GroES-like domain
APY30_22175	PF13602	Zinc-binding dehydrogenase
APY30_22180	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
APY30_22180	PF03466	LysR substrate binding domain
APY30_22190	PF13410	Glutathione S-transferase, C-terminal domain
APY30_22190	PF13417	Glutathione S-transferase, N-terminal domain
APY30_22200	PF13520	Amino acid permease
APY30_22205	PF07971	Glycosyl hydrolase family 92
APY30_22210	PF10947	APY30_22210
APY30_22215	PF00990	GGDEF domain
APY30_22215	PF01590	GAF domain
APY30_22215	PF08448	PAS fold
APY30_22235	PF10672	S-adenosylmethionine-dependent methyltransferase
APY30_22240	PF03741	APY30_22240
APY30_22245	PF01694	Rhomboid family
APY30_22250	PF03009	Glycerophosphoryl diester phosphodiesterase family
APY30_22255	PF00593	TonB dependent receptor
APY30_22255	PF07715	TonB-dependent Receptor Plug Domain
APY30_22260	PF01569	PAP2 superfamily
APY30_22265	PF01926	50S ribosome-binding GTPase
APY30_22265	PF10396	GTP-binding protein TrmE N-terminus
APY30_22265	PF12631	Catalytic cysteine-containing C-terminus of GTPase, MnmE
APY30_22270	PF00656	Caspase domain
APY30_22270	PF01522	Polysaccharide deacetylase
APY30_22270	PF13424	Tetratricopeptide repeat
APY30_22280	PF02096	60Kd inner membrane protein
APY30_22280	PF14849	YidC periplasmic domain
APY30_22285	PF00825	Ribonuclease P
APY30_22290	PF00468	Ribosomal protein L34
APY30_22300	PF00239	Resolvase, N terminal domain
APY30_22315	PF01527	Transposase
APY30_22320	PF00665	Integrase core domain
APY30_22320	PF13276	APY30_22320
APY30_22340	PF01382	Avidin family
APY30_22360	PF00239	Resolvase, N terminal domain
APY30_22360	PF02796	Helix-turn-helix domain of resolvase
APY30_22370	PF04014	Antidote-toxin recognition MazE
APY30_22375	PF01850	PIN domain
APY30_22385	PF06414	Zeta toxin
APY30_22390	PF04796	APY30_22390
APY30_22395	PF00665	Integrase core domain
APY30_22400	PF01527	Transposase
APY30_22405	PF01471	Putative peptidoglycan binding domain
APY30_22405	PF13406	Transglycosylase SLT domain
APY30_22415	PF01527	Transposase
APY30_22425	PF00239	Resolvase, N terminal domain
APY30_22430	PF16762	APY30_22430
APY30_22435	PF13470	APY30_22435
APY30_22440	PF01526	APY30_22440
APY30_22440	PF13700	APY30_22440
APY30_22465	PF13614	AAA domain
APY30_22470	PF02195	ParB-like nuclease domain
APY30_22470	PF08535	KorB domain
APY30_22475	PF16509	APY30_22475
APY30_22505	PF05016	Plasmid stabilisation system protein
APY30_22510	PF00665	Integrase core domain
APY30_22515	PF01527	Transposase
APY30_22520	PF02452	PemK-like protein
APY30_22525	PF11455	APY30_22525
APY30_22545	PF03377	Xanthomonas avirulence protein, Avr/PthA
APY30_22555	PF13508	Acetyltransferase (GNAT) domain
APY30_22560	PF08681	Protein of unknown function (DUF1778)
APY30_22570	PF00239	Resolvase, N terminal domain
APY30_22575	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
APY30_22585	PF13365	Trypsin-like peptidase domain
APY30_22590	PF04796	APY30_22590
APY30_22595	PF03377	Xanthomonas avirulence protein, Avr/PthA
APY30_22600	PF03377	Xanthomonas avirulence protein, Avr/PthA
APY30_22605	PF16762	APY30_22605