locus-tag class description BEN78_00020 IPR009057 Homeobox-like domain superfamily BEN78_00020 IPR001647 DNA-binding HTH domain, TetR-type BEN78_00020 IPR023764 Transcriptional repressor HTH, FabR BEN78_00030 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site BEN78_00030 IPR002888 [2Fe-2S]-binding BEN78_00030 IPR036884 [2Fe-2S]-binding domain superfamily BEN78_00030 IPR036010 2Fe-2S ferredoxin-like superfamily BEN78_00030 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain BEN78_00030 IPR006311 Twin-arginine translocation pathway, signal sequence BEN78_00030 IPR012675 Beta-grasp domain superfamily BEN78_00035 IPR016169 FAD-binding, type PCMH, subdomain 2 BEN78_00035 IPR002346 Molybdopterin dehydrogenase, FAD-binding BEN78_00035 IPR036318 FAD-binding, type PCMH-like superfamily BEN78_00035 IPR016166 FAD-binding domain, PCMH-type BEN78_00035 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily BEN78_00035 IPR005107 CO dehydrogenase flavoprotein, C-terminal BEN78_00040 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily BEN78_00040 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead BEN78_00040 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding BEN78_00040 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily BEN78_00050 IPR023271 Aquaporin-like BEN78_00050 IPR000292 Formate/nitrite transporter BEN78_00050 IPR024002 Formate/nitrite transporter, conserved site BEN78_00050 IPR023999 Formate transporter FocA, putative BEN78_00055 IPR012338 Beta-lactamase/transpeptidase-like BEN78_00055 IPR001466 Beta-lactamase-related BEN78_00055 IPR023650 Beta-lactamase, class-A active site BEN78_00060 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_00060 IPR005119 LysR, substrate-binding BEN78_00060 IPR000847 Transcription regulator HTH, LysR BEN78_00060 IPR036390 Winged helix DNA-binding domain superfamily BEN78_00065 IPR003680 Flavodoxin-like fold BEN78_00065 IPR029039 Flavoprotein-like superfamily BEN78_00130 IPR000014 PAS domain BEN78_00130 IPR000700 PAS-associated, C-terminal BEN78_00130 IPR035965 PAS domain superfamily BEN78_00130 IPR000160 GGDEF domain BEN78_00130 IPR029787 Nucleotide cyclase BEN78_00130 IPR013656 PAS fold-4 BEN78_00135 IPR005119 LysR, substrate-binding BEN78_00135 IPR000847 Transcription regulator HTH, LysR BEN78_00135 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_00135 IPR036390 Winged helix DNA-binding domain superfamily BEN78_00145 IPR025758 Fic/DOC N-terminal BEN78_00145 IPR003812 Fido domain BEN78_00145 IPR036597 Fido-like domain superfamily BEN78_00145 IPR026287 Protein adenylyltransferase SoFic-like BEN78_00145 IPR040198 Fido domain-containing protein BEN78_00150 IPR009822 YaeQ BEN78_00150 IPR011335 Restriction endonuclease type II-like BEN78_00150 IPR038590 YaeQ superfamily BEN78_00160 IPR016161 Aldehyde/histidinol dehydrogenase BEN78_00160 IPR016163 Aldehyde dehydrogenase, C-terminal BEN78_00160 IPR016160 Aldehyde dehydrogenase, cysteine active site BEN78_00160 IPR016162 Aldehyde dehydrogenase, N-terminal BEN78_00160 IPR015590 Aldehyde dehydrogenase domain BEN78_00170 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase BEN78_00170 IPR029056 Ribokinase-like BEN78_00175 IPR012337 Ribonuclease H-like superfamily BEN78_00175 IPR002156 Ribonuclease H domain BEN78_00175 IPR036397 Ribonuclease H superfamily BEN78_00175 IPR029033 Histidine phosphatase superfamily BEN78_00175 IPR013078 Histidine phosphatase superfamily, clade-1 BEN78_00175 IPR014636 RNase H, phosphoglycerate mutase domain-containing BEN78_00185 IPR006175 YjgF/YER057c/UK114 family BEN78_00185 IPR035959 RutC-like superfamily BEN78_00185 IPR038743 YjgH-like BEN78_00190 IPR011042 Six-bladed beta-propeller, TolB-like BEN78_00190 IPR012938 Glucose/Sorbosone dehydrogenase BEN78_00190 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase BEN78_00200 IPR035919 EAL domain superfamily BEN78_00200 IPR019494 FIST, C-domain BEN78_00200 IPR013702 FIST domain, N-terminal BEN78_00200 IPR000160 GGDEF domain BEN78_00200 IPR001633 EAL domain BEN78_00200 IPR029787 Nucleotide cyclase BEN78_00205 IPR002470 Peptidase S9A, prolyl oligopeptidase BEN78_00205 IPR029058 Alpha/Beta hydrolase fold BEN78_00205 IPR023302 Peptidase S9A, N-terminal domain BEN78_00205 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain BEN78_00210 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_00210 IPR012910 TonB-dependent receptor, plug domain BEN78_00210 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_00210 IPR010105 TonB-dependent siderophore receptor BEN78_00210 IPR039426 Vitamin B12 transporter BtuB-like BEN78_00215 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_00215 IPR039426 Vitamin B12 transporter BtuB-like BEN78_00215 IPR012910 TonB-dependent receptor, plug domain BEN78_00215 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_00215 IPR010105 TonB-dependent siderophore receptor BEN78_00235 IPR033128 Adenylosuccinate synthase, active site BEN78_00235 IPR018220 Adenylosuccinate synthase, GTP-binding site BEN78_00235 IPR001114 Adenylosuccinate synthetase BEN78_00235 IPR042111 Adenylosuccinate synthetase, domain 3 BEN78_00235 IPR042110 Adenylosuccinate synthetase, domain 2 BEN78_00235 IPR042109 Adenylosuccinate synthetase, domain 1 BEN78_00235 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_00245 IPR001107 Band 7 domain BEN78_00245 IPR036013 Band 7/SPFH domain superfamily BEN78_00245 IPR010200 HflC BEN78_00250 IPR001972 Stomatin family BEN78_00250 IPR036013 Band 7/SPFH domain superfamily BEN78_00250 IPR001107 Band 7 domain BEN78_00250 IPR010201 HflK BEN78_00250 IPR020980 Menbrane protein HflK, N-terminal BEN78_00255 IPR032305 GTP-binding protein, middle domain BEN78_00255 IPR006073 GTP binding domain BEN78_00255 IPR016496 GTPase HflX BEN78_00255 IPR025121 GTPase HflX, N-terminal BEN78_00255 IPR042108 GTPase HflX, N-terminal domain superfamily BEN78_00255 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_00255 IPR035647 EF-G domain III/V-like BEN78_00255 IPR030394 HflX-type guanine nucleotide-binding (G) domain BEN78_00260 IPR010920 LSM domain superfamily BEN78_00260 IPR005001 RNA-binding protein Hfq BEN78_00265 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_00265 IPR018022 IPP transferase BEN78_00265 IPR039657 Dimethylallyltransferase BEN78_00270 IPR002293 Amino acid/polyamine transporter I BEN78_00270 IPR004758 Amino acid transporter BEN78_00275 IPR006390 Dihydropteroate synthase BEN78_00275 IPR011005 Dihydropteroate synthase-like BEN78_00275 IPR000489 Pterin-binding domain BEN78_00285 IPR002877 Ribosomal RNA methyltransferase FtsJ domain BEN78_00285 IPR015507 Ribosomal RNA large subunit methyltransferase E BEN78_00285 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_00290 IPR035920 YhbY-like superfamily BEN78_00290 IPR017924 RNA-binding protein YhbY BEN78_00290 IPR001890 RNA-binding, CRM domain BEN78_00295 IPR036748 MTH938-like superfamily BEN78_00295 IPR007523 NDUFAF3/Mth938 domain-containing protein BEN78_00300 IPR011055 Duplicated hybrid motif BEN78_00300 IPR018392 LysM domain BEN78_00300 IPR036779 LysM domain superfamily BEN78_00300 IPR016047 Peptidase M23 BEN78_00305 IPR032816 SNARE associated Golgi protein BEN78_00310 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase BEN78_00310 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_00315 IPR036523 SurE-like phosphatase/nucleotidase superfamily BEN78_00315 IPR030048 Survival protein SurE BEN78_00315 IPR002828 Survival protein SurE-like phosphatase/nucleotidase BEN78_00325 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_00325 IPR004815 Lon protease, bacterial/eukaryotic-type BEN78_00325 IPR027065 Lon protease BEN78_00325 IPR003593 AAA+ ATPase domain BEN78_00325 IPR003959 ATPase, AAA-type, core BEN78_00325 IPR027543 Lon protease, bacterial BEN78_00325 IPR008269 Peptidase S16, Lon proteolytic domain BEN78_00325 IPR003111 Lon, substrate-binding domain BEN78_00325 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BEN78_00325 IPR020568 Ribosomal protein S5 domain 2-type fold BEN78_00325 IPR015947 PUA-like superfamily BEN78_00325 IPR008268 Peptidase S16, active site BEN78_00330 IPR038366 Zinc finger, ClpX C4-type superfamily BEN78_00330 IPR010603 Zinc finger, ClpX C4-type BEN78_00330 IPR003959 ATPase, AAA-type, core BEN78_00330 IPR019489 Clp ATPase, C-terminal BEN78_00330 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_00330 IPR004487 Clp protease, ATP-binding subunit ClpX BEN78_00330 IPR003593 AAA+ ATPase domain BEN78_00335 IPR033135 ClpP, histidine active site BEN78_00335 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA BEN78_00335 IPR029045 ClpP/crotonase-like domain superfamily BEN78_00335 IPR001907 ATP-dependent Clp protease proteolytic subunit BEN78_00335 IPR018215 ClpP, Ser active site BEN78_00340 IPR008880 Trigger factor, C-terminal BEN78_00340 IPR027304 Trigger factor/SurA domain superfamily BEN78_00340 IPR037041 Trigger factor, C-terminal domain superfamily BEN78_00340 IPR005215 Trigger factor BEN78_00340 IPR036611 Trigger factor ribosome-binding domain superfamily BEN78_00340 IPR008881 Trigger factor, ribosome-binding, bacterial BEN78_00360 IPR036380 Isochorismatase-like superfamily BEN78_00360 IPR000868 Isochorismatase-like BEN78_00370 IPR012347 Ferritin-like BEN78_00370 IPR009078 Ferritin-like superfamily BEN78_00370 IPR010287 Domain of unknown function DUF892 BEN78_00390 IPR024084 Isopropylmalate dehydrogenase-like domain BEN78_00400 IPR014025 Glutaredoxin subgroup BEN78_00400 IPR011900 Glutaredoxin, GrxC BEN78_00400 IPR036249 Thioredoxin-like superfamily BEN78_00400 IPR011767 Glutaredoxin active site BEN78_00400 IPR002109 Glutaredoxin BEN78_00405 IPR030873 Beta-barrel assembly-enhancing protease BEN78_00405 IPR013026 Tetratricopeptide repeat-containing domain BEN78_00405 IPR011990 Tetratricopeptide-like helical domain superfamily BEN78_00405 IPR019734 Tetratricopeptide repeat BEN78_00405 IPR001915 Peptidase M48 BEN78_00410 IPR011006 CheY-like superfamily BEN78_00410 IPR001867 OmpR/PhoB-type DNA-binding domain BEN78_00410 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_00410 IPR039420 Transcriptional regulatory protein WalR-like BEN78_00410 IPR001789 Signal transduction response regulator, receiver domain BEN78_00410 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB BEN78_00415 IPR035965 PAS domain superfamily BEN78_00415 IPR000014 PAS domain BEN78_00415 IPR021766 Phosphate regulon sensor protein PhoR BEN78_00415 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BEN78_00415 IPR005467 Histidine kinase domain BEN78_00415 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_00415 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_00415 IPR013767 PAS fold BEN78_00415 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BEN78_00415 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR BEN78_00415 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BEN78_00420 IPR024953 Polyphosphate kinase middle domain BEN78_00420 IPR041108 Polyphosphate kinase, C-terminal domain 1 BEN78_00420 IPR003414 Polyphosphate kinase BEN78_00420 IPR036830 Polyphosphate kinase middle domain superfamily BEN78_00420 IPR025200 Polyphosphate kinase C-terminal domain 2 BEN78_00420 IPR025198 Polyphosphate kinase N-terminal domain BEN78_00420 IPR036832 Polyphosphate kinase N-terminal domain superfamily BEN78_00425 IPR022371 Exopolyphosphatase BEN78_00425 IPR030673 Pyrophosphatase, GppA/Ppx-type BEN78_00425 IPR003695 Ppx/GppA phosphatase BEN78_00430 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain BEN78_00430 IPR001296 Glycosyl transferase, family 1 BEN78_00435 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily BEN78_00435 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BEN78_00440 IPR010364 Uncharacterised protein family, inner membrane CreD BEN78_00445 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_00445 IPR003660 HAMP domain BEN78_00445 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_00445 IPR005467 Histidine kinase domain BEN78_00445 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BEN78_00445 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BEN78_00445 IPR029151 Periplasmic sensor-like domain superfamily BEN78_00445 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BEN78_00450 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_00450 IPR039420 Transcriptional regulatory protein WalR-like BEN78_00450 IPR016032 Signal transduction response regulator, C-terminal effector BEN78_00450 IPR001789 Signal transduction response regulator, receiver domain BEN78_00450 IPR011006 CheY-like superfamily BEN78_00450 IPR001867 OmpR/PhoB-type DNA-binding domain BEN78_00455 IPR007473 Ribosomal RNA large subunit methyltransferase J BEN78_00455 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_00465 IPR011545 DEAD/DEAH box helicase domain BEN78_00465 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN78_00465 IPR001650 Helicase, C-terminal BEN78_00465 IPR003711 CarD-like/TRCF domain BEN78_00465 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_00465 IPR037235 TRCF-like, C-terminal domain BEN78_00465 IPR005118 Transcription-repair-coupling factor, C-terminal domain BEN78_00465 IPR041471 UvrB, interaction domain BEN78_00465 IPR036101 CarD-like/TRCF domain superfamily BEN78_00465 IPR004576 Transcription-repair coupling factor BEN78_00470 IPR037522 HD-GYP domain BEN78_00470 IPR003607 HD/PDEase domain BEN78_00470 IPR001789 Signal transduction response regulator, receiver domain BEN78_00470 IPR011006 CheY-like superfamily BEN78_00490 IPR011650 Peptidase M20, dimerisation domain BEN78_00490 IPR002933 Peptidase M20 BEN78_00490 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria BEN78_00490 IPR036264 Bacterial exopeptidase dimerisation domain BEN78_00495 IPR006660 Arsenate reductase-like BEN78_00495 IPR036249 Thioredoxin-like superfamily BEN78_00495 IPR006504 Transcriptional regulator Spx/MgsR BEN78_00500 IPR001451 Hexapeptide repeat BEN78_00500 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family BEN78_00500 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 BEN78_00500 IPR011004 Trimeric LpxA-like superfamily BEN78_00500 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily BEN78_00505 IPR002912 ACT domain BEN78_00505 IPR003607 HD/PDEase domain BEN78_00505 IPR006674 HD domain BEN78_00505 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme BEN78_00505 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase BEN78_00505 IPR002934 Polymerase, nucleotidyl transferase domain BEN78_00510 IPR000994 Peptidase M24 BEN78_00510 IPR036005 Creatinase/aminopeptidase-like BEN78_00510 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 BEN78_00510 IPR001714 Peptidase M24, methionine aminopeptidase BEN78_00540 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid BEN78_00540 IPR018130 Ribosomal protein S2, conserved site BEN78_00540 IPR001865 Ribosomal protein S2 BEN78_00540 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily BEN78_00545 IPR036402 Elongation factor Ts, dimerisation domain superfamily BEN78_00545 IPR009060 UBA-like superfamily BEN78_00545 IPR018101 Translation elongation factor Ts, conserved site BEN78_00545 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation BEN78_00545 IPR001816 Translation elongation factor EFTs/EF1B BEN78_00560 IPR005835 Nucleotidyl transferase domain BEN78_00560 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_00560 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type BEN78_00570 IPR000715 Glycosyl transferase, family 4 BEN78_00575 IPR019734 Tetratricopeptide repeat BEN78_00575 IPR011990 Tetratricopeptide-like helical domain superfamily BEN78_00575 IPR013026 Tetratricopeptide repeat-containing domain BEN78_00575 IPR041166 LapB, rubredoxin metal binding domain BEN78_00575 IPR030865 Lipopolysaccharide assembly protein B BEN78_00580 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily BEN78_00580 IPR020816 Histone-like DNA-binding protein, conserved site BEN78_00580 IPR005685 Integration host factor, beta subunit BEN78_00580 IPR000119 Histone-like DNA-binding protein BEN78_00585 IPR012340 Nucleic acid-binding, OB-fold BEN78_00585 IPR000110 Ribosomal protein S1 BEN78_00585 IPR022967 RNA-binding domain, S1 BEN78_00585 IPR003029 S1 domain BEN78_00590 IPR003136 Cytidylate kinase BEN78_00590 IPR011994 Cytidylate kinase domain BEN78_00590 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_00595 IPR000473 Ribosomal protein L36 BEN78_00595 IPR035977 Ribosomal protein L36 superfamily BEN78_00605 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type BEN78_00605 IPR017754 Agmatine deiminase BEN78_00610 IPR001466 Beta-lactamase-related BEN78_00610 IPR012338 Beta-lactamase/transpeptidase-like BEN78_00615 IPR001110 Uncharacterised protein family UPF0012, conserved site BEN78_00615 IPR003010 Carbon-nitrogen hydrolase BEN78_00615 IPR036526 Carbon-nitrogen hydrolase superfamily BEN78_00620 IPR016181 Acyl-CoA N-acyltransferase BEN78_00620 IPR000182 GNAT domain BEN78_00630 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN78_00630 IPR001036 Acriflavin resistance protein BEN78_00635 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN78_00635 IPR001036 Acriflavin resistance protein BEN78_00640 IPR006143 RND efflux pump, membrane fusion protein BEN78_00640 IPR022824 Multidrug resistance protein MdtA BEN78_00640 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BEN78_00650 IPR008168 Cytochrome c, class IC BEN78_00650 IPR036909 Cytochrome c-like domain superfamily BEN78_00650 IPR009056 Cytochrome c-like domain BEN78_00660 IPR017726 Fe/S biogenesis protein NfuA BEN78_00660 IPR034904 Fe-S cluster assembly domain superfamily BEN78_00660 IPR035903 HesB-like domain superfamily BEN78_00660 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal BEN78_00665 IPR001533 Pterin 4 alpha carbinolamine dehydratase BEN78_00665 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily BEN78_00680 IPR004659 Ribonuclease E/G BEN78_00680 IPR028878 Ribonuclease E BEN78_00680 IPR021968 Polyribonucleotide phosphorylase C-terminal BEN78_00680 IPR012340 Nucleic acid-binding, OB-fold BEN78_00680 IPR003029 S1 domain BEN78_00680 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G BEN78_00680 IPR022967 RNA-binding domain, S1 BEN78_00690 IPR011006 CheY-like superfamily BEN78_00690 IPR016032 Signal transduction response regulator, C-terminal effector BEN78_00690 IPR001789 Signal transduction response regulator, receiver domain BEN78_00690 IPR000792 Transcription regulator LuxR, C-terminal BEN78_00695 IPR003782 Copper chaperone SCO1/SenC BEN78_00695 IPR036249 Thioredoxin-like superfamily BEN78_00700 IPR004839 Aminotransferase, class I/classII BEN78_00700 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_00700 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BEN78_00700 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BEN78_00705 IPR003593 AAA+ ATPase domain BEN78_00705 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_00705 IPR005895 ABC transporter, haem export, CcmA BEN78_00705 IPR003439 ABC transporter-like BEN78_00705 IPR017871 ABC transporter, conserved site BEN78_00710 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria BEN78_00710 IPR003544 Cytochrome c-type biogenesis protein CcmB BEN78_00715 IPR002541 Cytochrome c assembly protein BEN78_00715 IPR003557 Cytochrome c-type biogenesis protein CcmC BEN78_00725 IPR036127 CcmE-like superfamily BEN78_00725 IPR004329 CcmE/CycJ protein BEN78_00735 IPR013766 Thioredoxin domain BEN78_00735 IPR036249 Thioredoxin-like superfamily BEN78_00735 IPR013740 Redoxin BEN78_00735 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE BEN78_00735 IPR017937 Thioredoxin, conserved site BEN78_00740 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily BEN78_00740 IPR005616 CcmH/CycL/Ccl2/NrfF family BEN78_00780 IPR007168 Phage shock protein, PspC, N-terminal BEN78_00790 IPR010123 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit BEN78_00800 IPR000462 CDP-alcohol phosphatidyltransferase BEN78_00800 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase BEN78_00840 IPR000792 Transcription regulator LuxR, C-terminal BEN78_00840 IPR011006 CheY-like superfamily BEN78_00840 IPR016032 Signal transduction response regulator, C-terminal effector BEN78_00840 IPR001789 Signal transduction response regulator, receiver domain BEN78_00845 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain BEN78_00845 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_00845 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_00855 IPR013033 Septum formation inhibitor MinC BEN78_00855 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal BEN78_00855 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily BEN78_00855 IPR005526 Septum formation inhibitor MinC, C-terminal BEN78_00855 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily BEN78_00855 IPR007874 Septum formation inhibitor MinC, N-terminal BEN78_00860 IPR010223 ATP binding protein MinD, bacterial-type BEN78_00860 IPR025501 ATP binding protein MinD BEN78_00860 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_00860 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain BEN78_00865 IPR005527 Cell division topological specificity factor MinE BEN78_00865 IPR036707 Cell division topological specificity factor MinE superfamily BEN78_00880 IPR036259 MFS transporter superfamily BEN78_00880 IPR020846 Major facilitator superfamily domain BEN78_00880 IPR011701 Major facilitator superfamily BEN78_00880 IPR004812 Drug resistance transporter Bcr/CmlA subfamily BEN78_00895 IPR003437 Glycine dehydrogenase (decarboxylating) BEN78_00895 IPR020581 Glycine cleavage system P protein BEN78_00895 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BEN78_00895 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BEN78_00895 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_00905 IPR009078 Ferritin-like superfamily BEN78_00905 IPR012347 Ferritin-like BEN78_00905 IPR010287 Domain of unknown function DUF892 BEN78_00915 IPR006076 FAD dependent oxidoreductase BEN78_00915 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_00920 IPR029062 Class I glutamine amidotransferase-like BEN78_00920 IPR024712 Catalase, mono-functional, haem-containing, clade 2 BEN78_00920 IPR011614 Catalase core domain BEN78_00920 IPR037060 Catalase core domain superfamily BEN78_00920 IPR020835 Catalase superfamily BEN78_00920 IPR010582 Catalase immune-responsive domain BEN78_00920 IPR041399 Large catalase, C-terminal domain BEN78_00920 IPR024708 Catalase active site BEN78_00920 IPR002226 Catalase haem-binding site BEN78_00920 IPR018028 Catalase, mono-functional, haem-containing BEN78_00925 IPR029787 Nucleotide cyclase BEN78_00925 IPR029016 GAF-like domain superfamily BEN78_00925 IPR001610 PAC motif BEN78_00925 IPR000014 PAS domain BEN78_00925 IPR000700 PAS-associated, C-terminal BEN78_00925 IPR035965 PAS domain superfamily BEN78_00925 IPR013767 PAS fold BEN78_00925 IPR000160 GGDEF domain BEN78_00925 IPR003018 GAF domain BEN78_00925 IPR035919 EAL domain superfamily BEN78_00925 IPR001633 EAL domain BEN78_00950 IPR002661 Ribosome recycling factor BEN78_00950 IPR036191 RRF superfamily BEN78_00950 IPR023584 Ribosome recycling factor domain BEN78_00955 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site BEN78_00955 IPR036424 Decaprenyl diphosphate synthase-like superfamily BEN78_00955 IPR001441 Decaprenyl diphosphate synthase-like BEN78_00960 IPR000374 Phosphatidate cytidylyltransferase BEN78_00965 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase BEN78_00965 IPR026877 DXP reductoisomerase C-terminal domain BEN78_00965 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal BEN78_00965 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal BEN78_00965 IPR036291 NAD(P)-binding domain superfamily BEN78_00965 IPR036169 DXP reductoisomerase, C-terminal domain superfamily BEN78_00970 IPR008915 Peptidase M50 BEN78_00970 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase BEN78_00970 IPR036034 PDZ superfamily BEN78_00970 IPR041489 PDZ domain 6 BEN78_00970 IPR001478 PDZ domain BEN78_00975 IPR010827 POTRA domain, BamA/TamA-like BEN78_00975 IPR034746 POTRA domain BEN78_00975 IPR039910 Surface antigen D15-like BEN78_00975 IPR000184 Bacterial surface antigen (D15) BEN78_00975 IPR023707 Outer membrane protein assembly factor BamA BEN78_00980 IPR001451 Hexapeptide repeat BEN78_00980 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD BEN78_00980 IPR011004 Trimeric LpxA-like superfamily BEN78_00980 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region BEN78_00980 IPR018357 Hexapeptide transferase, conserved site BEN78_00985 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ BEN78_00985 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ BEN78_00985 IPR029069 HotDog domain superfamily BEN78_00990 IPR011004 Trimeric LpxA-like superfamily BEN78_00990 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase BEN78_00990 IPR001451 Hexapeptide repeat BEN78_00990 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal BEN78_00990 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily BEN78_00995 IPR003835 Glycosyl transferase, family 19 BEN78_01000 IPR001352 Ribonuclease HII/HIII BEN78_01000 IPR022898 Ribonuclease HII BEN78_01000 IPR012337 Ribonuclease H-like superfamily BEN78_01000 IPR036397 Ribonuclease H superfamily BEN78_01000 IPR024567 Ribonuclease HII/HIII domain BEN78_01005 IPR004805 DNA polymerase III, alpha subunit BEN78_01005 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain BEN78_01005 IPR040982 DNA polymerase III alpha subunit finger domain BEN78_01005 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain BEN78_01005 IPR012340 Nucleic acid-binding, OB-fold BEN78_01005 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type BEN78_01005 IPR004013 PHP domain BEN78_01005 IPR003141 Polymerase/histidinol phosphatase, N-terminal BEN78_01005 IPR016195 Polymerase/histidinol phosphatase-like BEN78_01005 IPR029460 DNA polymerase, helix-hairpin-helix motif BEN78_01015 IPR001095 Acetyl-CoA carboxylase, alpha subunit BEN78_01015 IPR029045 ClpP/crotonase-like domain superfamily BEN78_01015 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal BEN78_01020 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal BEN78_01020 IPR013785 Aldolase-type TIM barrel BEN78_01020 IPR023663 NADPH dehydrogenase BEN78_01025 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_01025 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal BEN78_01025 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal BEN78_01025 IPR012094 tRNA(Ile)-lysidine synthase BEN78_01025 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal BEN78_01025 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain BEN78_01030 IPR003761 Exonuclease VII, small subunit BEN78_01030 IPR037004 Exonuclease VII, small subunit superfamily BEN78_01035 IPR008949 Isoprenoid synthase domain superfamily BEN78_01035 IPR033749 Polyprenyl synthetase, conserved site BEN78_01035 IPR000092 Polyprenyl synthetase BEN78_01055 IPR002510 Metalloprotease TldD/PmbA BEN78_01055 IPR035068 Metalloprotease TldD/PmbA, N-terminal BEN78_01055 IPR036059 Metalloprotease TldD/PmbA superfamily BEN78_01060 IPR023153 PSPTO4464-like domain superfamily BEN78_01060 IPR006839 Ribosome-associated, YjgA BEN78_01065 IPR036059 Metalloprotease TldD/PmbA superfamily BEN78_01065 IPR035068 Metalloprotease TldD/PmbA, N-terminal BEN78_01065 IPR002510 Metalloprotease TldD/PmbA BEN78_01065 IPR025502 TldD BEN78_01075 IPR004659 Ribonuclease E/G BEN78_01075 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G BEN78_01075 IPR012340 Nucleic acid-binding, OB-fold BEN78_01075 IPR003029 S1 domain BEN78_01075 IPR022967 RNA-binding domain, S1 BEN78_01080 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein BEN78_01080 IPR029001 Inosine triphosphate pyrophosphatase-like BEN78_01085 IPR007497 Protein of unknown function DUF541 BEN78_01105 IPR036107 Carbon storage regulator superfamily BEN78_01105 IPR003751 Translational regulator CsrA BEN78_01110 IPR012947 Threonyl/alanyl tRNA synthetase, SAD BEN78_01110 IPR009000 Translation protein, beta-barrel domain superfamily BEN78_01110 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily BEN78_01110 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily BEN78_01110 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain BEN78_01110 IPR003156 DHHA1 domain BEN78_01110 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria BEN78_01110 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal BEN78_01110 IPR002318 Alanine-tRNA ligase, class IIc BEN78_01115 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_01115 IPR003783 Regulatory protein RecX BEN78_01120 IPR003593 AAA+ ATPase domain BEN78_01120 IPR013765 DNA recombination and repair protein RecA BEN78_01120 IPR020584 DNA recombination/repair protein RecA, conserved site BEN78_01120 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_01120 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain BEN78_01120 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface BEN78_01120 IPR023400 DNA recombination and repair protein RecA, C-terminal BEN78_01125 IPR039418 LexA-like BEN78_01125 IPR006197 Peptidase S24, LexA-like BEN78_01125 IPR015927 Peptidase S24/S26A/S26B/S26C BEN78_01125 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_01125 IPR036390 Winged helix DNA-binding domain superfamily BEN78_01125 IPR006200 Transcription regulator LexA BEN78_01125 IPR036286 LexA/Signal peptidase-like superfamily BEN78_01125 IPR006199 LexA repressor, DNA-binding domain BEN78_01130 IPR020103 Pseudouridine synthase, catalytic domain superfamily BEN78_01130 IPR042214 Pseudouridine synthase, TruD, catalytic domain BEN78_01130 IPR011760 Pseudouridine synthase, TruD, insertion domain BEN78_01130 IPR020119 Pseudouridine synthase TruD, conserved site BEN78_01130 IPR001656 Pseudouridine synthase, TruD BEN78_01135 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily BEN78_01135 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase BEN78_01135 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site BEN78_01140 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_01140 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site BEN78_01140 IPR034683 Cytidylyltransferase IspD/TarI BEN78_01140 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BEN78_01145 IPR023081 Cell division protein FtsB BEN78_01145 IPR007060 Septum formation initiator FtsL/DivIC BEN78_01150 IPR020810 Enolase, C-terminal TIM barrel domain BEN78_01150 IPR000941 Enolase BEN78_01150 IPR029017 Enolase-like, N-terminal BEN78_01150 IPR036849 Enolase-like, C-terminal domain superfamily BEN78_01150 IPR020811 Enolase, N-terminal BEN78_01150 IPR020809 Enolase, conserved site BEN78_01155 IPR013785 Aldolase-type TIM barrel BEN78_01155 IPR006218 DAHP synthetase I/KDSA BEN78_01155 IPR006269 3-deoxy-8-phosphooctulonate synthase BEN78_01165 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_01165 IPR033828 CTP synthase GATase domain BEN78_01165 IPR004468 CTP synthase BEN78_01165 IPR017456 CTP synthase, N-terminal BEN78_01165 IPR029062 Class I glutamine amidotransferase-like BEN78_01165 IPR017926 Glutamine amidotransferase BEN78_01175 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal BEN78_01175 IPR006171 TOPRIM domain BEN78_01175 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative BEN78_01175 IPR018522 DNA topoisomerase, type IIA, conserved site BEN78_01175 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 BEN78_01175 IPR013760 DNA topoisomerase, type IIA-like domain superfamily BEN78_01175 IPR002288 DNA gyrase B subunit, C-terminal BEN78_01175 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BEN78_01175 IPR020568 Ribosomal protein S5 domain 2-type fold BEN78_01175 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_01175 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_01175 IPR001241 DNA topoisomerase, type IIA BEN78_01180 IPR004638 Drug resistance transporter EmrB-like BEN78_01180 IPR011701 Major facilitator superfamily BEN78_01180 IPR020846 Major facilitator superfamily domain BEN78_01180 IPR036259 MFS transporter superfamily BEN78_01180 IPR023721 Multidrug resistance protein MdtD BEN78_01190 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_01190 IPR010916 TonB box, conserved site BEN78_01190 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_01190 IPR010917 TonB-dependent receptor, conserved site BEN78_01190 IPR039426 Vitamin B12 transporter BtuB-like BEN78_01190 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_01190 IPR012910 TonB-dependent receptor, plug domain BEN78_01195 IPR000843 LacI-type HTH domain BEN78_01195 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BEN78_01195 IPR001761 Periplasmic binding protein/LacI sugar binding domain BEN78_01195 IPR028082 Periplasmic binding protein-like I BEN78_01215 IPR006226 PIN domain toxin BEN78_01215 IPR022907 VapC family BEN78_01215 IPR002716 PIN domain BEN78_01215 IPR029060 PIN-like domain superfamily BEN78_01220 IPR023753 FAD/NAD(P)-binding domain BEN78_01220 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily BEN78_01220 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site BEN78_01220 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_01220 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I BEN78_01220 IPR006322 Glutathione reductase, eukaryote/bacterial BEN78_01220 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BEN78_01225 IPR023080 D-amino acid dehydrogenase DadA BEN78_01225 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_01225 IPR006076 FAD dependent oxidoreductase BEN78_01230 IPR007349 Domain of unknown function DUF418 BEN78_01235 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BEN78_01240 IPR000064 Endopeptidase, NLPC/P60 domain BEN78_01240 IPR038765 Papain-like cysteine peptidase superfamily BEN78_01245 IPR038765 Papain-like cysteine peptidase superfamily BEN78_01245 IPR000064 Endopeptidase, NLPC/P60 domain BEN78_01265 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_01265 IPR014036 DeoR C-terminal sensor domain BEN78_01265 IPR001034 DeoR-type HTH domain BEN78_01265 IPR018356 Transcription regulator, HTH DeoR-type, conserved site BEN78_01265 IPR037171 NagB/RpiA transferase-like BEN78_01265 IPR036390 Winged helix DNA-binding domain superfamily BEN78_01270 IPR036259 MFS transporter superfamily BEN78_01270 IPR020846 Major facilitator superfamily domain BEN78_01270 IPR011701 Major facilitator superfamily BEN78_01280 IPR000639 Epoxide hydrolase-like BEN78_01280 IPR000073 Alpha/beta hydrolase fold-1 BEN78_01280 IPR029058 Alpha/Beta hydrolase fold BEN78_01315 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_01315 IPR041628 ChlI/MoxR, AAA lid domain BEN78_01315 IPR011703 ATPase, AAA-3 BEN78_01345 IPR036390 Winged helix DNA-binding domain superfamily BEN78_01345 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_01345 IPR011711 GntR, C-terminal BEN78_01345 IPR008920 Transcription regulator FadR/GntR, C-terminal BEN78_01345 IPR000524 Transcription regulator HTH, GntR BEN78_01355 IPR039513 PL-6 family BEN78_01355 IPR011050 Pectin lyase fold/virulence factor BEN78_01355 IPR012334 Pectin lyase fold BEN78_01360 IPR012480 Heparinase II/III-like BEN78_01360 IPR008397 Alginate lyase domain BEN78_01360 IPR008929 Chondroitin AC/alginate lyase BEN78_01365 IPR036259 MFS transporter superfamily BEN78_01365 IPR020846 Major facilitator superfamily domain BEN78_01365 IPR011701 Major facilitator superfamily BEN78_01370 IPR020904 Short-chain dehydrogenase/reductase, conserved site BEN78_01370 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_01370 IPR036291 NAD(P)-binding domain superfamily BEN78_01370 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase BEN78_01385 IPR016462 Molybdate-dependent transcriptional regulator ModE BEN78_01385 IPR003725 Molybdenum-binding protein ModE, N-terminal BEN78_01385 IPR004606 Molybdenum-pterin binding BEN78_01385 IPR005116 Transport-associated OB, type 1 BEN78_01385 IPR000847 Transcription regulator HTH, LysR BEN78_01385 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_01385 IPR008995 Molybdate/tungstate binding, C-terminal BEN78_01385 IPR036390 Winged helix DNA-binding domain superfamily BEN78_01390 IPR020846 Major facilitator superfamily domain BEN78_01390 IPR036259 MFS transporter superfamily BEN78_01390 IPR011701 Major facilitator superfamily BEN78_01390 IPR026355 Oxalate/formate antiporter BEN78_01390 IPR004741 Oxalate/formate antiporter family transporter BEN78_01395 IPR003786 Sulfur carrier protein FdhD BEN78_01395 IPR016193 Cytidine deaminase-like BEN78_01400 IPR037951 YdeP-like, MopB domain BEN78_01400 IPR006656 Molybdopterin oxidoreductase BEN78_01400 IPR010046 Oxidoreductase alpha (molybdopterin) subunit BEN78_01400 IPR041953 YdeP, molybdopterin-binding oxidoreductase-like domain BEN78_01400 IPR009010 Aspartate decarboxylase-like domain superfamily BEN78_01425 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BEN78_01425 IPR006710 Glycoside hydrolase, family 43 BEN78_01430 IPR018043 Sodium:galactoside symporter, conserved site BEN78_01430 IPR001927 Sodium:galactoside symporter BEN78_01430 IPR039672 Lactose permease-like BEN78_01430 IPR036259 MFS transporter superfamily BEN78_01445 IPR001000 Glycoside hydrolase family 10 domain BEN78_01445 IPR008979 Galactose-binding-like domain superfamily BEN78_01445 IPR005084 Carbohydrate binding module family 6 BEN78_01445 IPR018366 Carbohydrate-binding type-2, conserved site BEN78_01445 IPR012291 CBM2, carbohydrate-binding domain superfamily BEN78_01445 IPR017853 Glycoside hydrolase superfamily BEN78_01445 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily BEN78_01445 IPR001919 Carbohydrate-binding type-2 domain BEN78_01445 IPR031158 Glycosyl hydrolases family 10, active site BEN78_01455 IPR003766 Uronate isomerase BEN78_01455 IPR032466 Metal-dependent hydrolase BEN78_01460 IPR001000 Glycoside hydrolase family 10 domain BEN78_01460 IPR017853 Glycoside hydrolase superfamily BEN78_01460 IPR031158 Glycosyl hydrolases family 10, active site BEN78_01470 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site BEN78_01470 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain BEN78_01470 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F BEN78_01470 IPR002942 RNA-binding S4 domain BEN78_01470 IPR036986 RNA-binding S4 domain superfamily BEN78_01470 IPR006145 Pseudouridine synthase, RsuA/RluA BEN78_01470 IPR020103 Pseudouridine synthase, catalytic domain superfamily BEN78_01480 IPR011042 Six-bladed beta-propeller, TolB-like BEN78_01480 IPR005511 Senescence marker protein-30 (SMP-30) BEN78_01480 IPR006311 Twin-arginine translocation pathway, signal sequence BEN78_01480 IPR013658 SMP-30/Gluconolactonase/LRE-like region BEN78_01485 IPR036291 NAD(P)-binding domain superfamily BEN78_01485 IPR000534 Semialdehyde dehydrogenase, NAD-binding BEN78_01485 IPR016040 NAD(P)-binding domain BEN78_01490 IPR018060 DNA binding HTH domain, AraC-type BEN78_01495 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_01495 IPR020904 Short-chain dehydrogenase/reductase, conserved site BEN78_01495 IPR036291 NAD(P)-binding domain superfamily BEN78_01495 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase BEN78_01510 IPR001466 Beta-lactamase-related BEN78_01510 IPR012338 Beta-lactamase/transpeptidase-like BEN78_01525 IPR003691 Putative fluoride ion transporter CrcB BEN78_01530 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BEN78_01530 IPR006290 Heavy metal sensor kinase BEN78_01530 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BEN78_01530 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BEN78_01530 IPR005467 Histidine kinase domain BEN78_01530 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_01530 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_01530 IPR003660 HAMP domain BEN78_01535 IPR011006 CheY-like superfamily BEN78_01535 IPR001867 OmpR/PhoB-type DNA-binding domain BEN78_01535 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_01535 IPR016032 Signal transduction response regulator, C-terminal effector BEN78_01535 IPR001789 Signal transduction response regulator, receiver domain BEN78_01535 IPR039420 Transcriptional regulatory protein WalR-like BEN78_01540 IPR006143 RND efflux pump, membrane fusion protein BEN78_01540 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BEN78_01560 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BEN78_01560 IPR013118 Mannitol dehydrogenase, C-terminal BEN78_01560 IPR036291 NAD(P)-binding domain superfamily BEN78_01560 IPR000669 Mannitol dehydrogenase BEN78_01560 IPR013328 6-phosphogluconate dehydrogenase, domain 2 BEN78_01560 IPR013131 Mannitol dehydrogenase, N-terminal BEN78_01560 IPR023027 Mannitol dehydrogenase, conserved site BEN78_01565 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BEN78_01565 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily BEN78_01565 IPR006710 Glycoside hydrolase, family 43 BEN78_01565 IPR041542 Beta-xylosidase, C-terminal Concanavalin A-like domain BEN78_01570 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain BEN78_01570 IPR029065 Enolase C-terminal domain-like BEN78_01570 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal BEN78_01570 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site BEN78_01570 IPR034593 Mandelate racemase-like BEN78_01570 IPR036849 Enolase-like, C-terminal domain superfamily BEN78_01570 IPR034589 D-mannonate dehydratase-like BEN78_01570 IPR029017 Enolase-like, N-terminal BEN78_01580 IPR029018 Beta-hexosaminidase-like, domain 2 BEN78_01580 IPR017853 Glycoside hydrolase superfamily BEN78_01580 IPR011100 Glycosyl hydrolase family 67, catalytic domain BEN78_01580 IPR011099 Glycosyl hydrolase family 67, C-terminal BEN78_01580 IPR005154 Alpha glucuronidase, N-terminal BEN78_01580 IPR011395 Alpha glucuronidase BEN78_01580 IPR037054 Alpha-glucuronidase, C-terminal domain superfamily BEN78_01585 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BEN78_01585 IPR028082 Periplasmic binding protein-like I BEN78_01585 IPR006377 Catabolite control protein A BEN78_01585 IPR000843 LacI-type HTH domain BEN78_01590 IPR036237 Xylose isomerase-like superfamily BEN78_01590 IPR013452 Xylose isomerase, bacterial-type BEN78_01590 IPR001998 Xylose isomerase BEN78_01595 IPR006000 Xylulokinase BEN78_01595 IPR000577 Carbohydrate kinase, FGGY BEN78_01595 IPR018485 Carbohydrate kinase, FGGY, C-terminal BEN78_01595 IPR018483 Carbohydrate kinase, FGGY, conserved site BEN78_01595 IPR018484 Carbohydrate kinase, FGGY, N-terminal BEN78_01630 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BEN78_01630 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BEN78_01640 IPR004821 Cytidyltransferase-like domain BEN78_01640 IPR001980 Phosphopantetheine adenylyltransferase BEN78_01640 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_01645 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BEN78_01645 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_01645 IPR004398 RNA methyltransferase, RsmD BEN78_01650 IPR036225 SRP/SRP receptor, N-terminal BEN78_01650 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain BEN78_01650 IPR003593 AAA+ ATPase domain BEN78_01650 IPR013822 Signal recognition particle SRP54, helical bundle BEN78_01650 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily BEN78_01650 IPR004390 Signal-recognition particle receptor FtsY BEN78_01650 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_01660 IPR011257 DNA glycosylase BEN78_01660 IPR004036 Endonuclease III-like, conserved site-2 BEN78_01660 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif BEN78_01660 IPR003265 HhH-GPD domain BEN78_01660 IPR000445 Helix-hairpin-helix motif BEN78_01660 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal BEN78_01660 IPR029119 MutY, C-terminal BEN78_01660 IPR015797 NUDIX hydrolase-like domain superfamily BEN78_01660 IPR005760 A/G-specific adenine glycosylase MutY BEN78_01660 IPR004035 Endonuclease III, iron-sulphur binding site BEN78_01665 IPR007457 Fe(II) trafficking protein YggX BEN78_01665 IPR036766 Fe(II) trafficking protein YggX superfamily BEN78_01680 IPR015927 Peptidase S24/S26A/S26B/S26C BEN78_01680 IPR006197 Peptidase S24, LexA-like BEN78_01680 IPR036286 LexA/Signal peptidase-like superfamily BEN78_01680 IPR039418 LexA-like BEN78_01700 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal BEN78_01700 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain BEN78_01700 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain BEN78_01700 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily BEN78_01700 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily BEN78_01700 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal BEN78_01700 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal BEN78_01710 IPR029061 Thiamin diphosphate-binding fold BEN78_01710 IPR005477 Deoxyxylulose-5-phosphate synthase BEN78_01710 IPR005474 Transketolase, N-terminal BEN78_01710 IPR033248 Transketolase, C-terminal domain BEN78_01710 IPR020826 Transketolase binding site BEN78_01710 IPR005475 Transketolase-like, pyrimidine-binding domain BEN78_01710 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II BEN78_01720 IPR011008 Dimeric alpha-beta barrel BEN78_01720 IPR009874 Protein of unknown function DUF1428 BEN78_01740 IPR009061 Putative DNA-binding domain superfamily BEN78_01740 IPR000551 MerR-type HTH domain BEN78_01745 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily BEN78_01745 IPR020816 Histone-like DNA-binding protein, conserved site BEN78_01745 IPR000119 Histone-like DNA-binding protein BEN78_01745 IPR005684 Integration host factor, alpha subunit BEN78_01755 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm BEN78_01755 IPR002319 Phenylalanyl-tRNA synthetase BEN78_01755 IPR006195 Aminoacyl-tRNA synthetase, class II BEN78_01755 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial BEN78_01755 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal BEN78_01760 IPR005813 Ribosomal protein L20 BEN78_01760 IPR035566 Ribosomal protein L20, C-terminal BEN78_01765 IPR021137 Ribosomal protein L35 BEN78_01765 IPR018265 Ribosomal protein L35, conserved site BEN78_01765 IPR001706 Ribosomal protein L35, non-mitochondrial BEN78_01765 IPR037229 Ribosomal protein L35 superfamily BEN78_01770 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily BEN78_01770 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily BEN78_01770 IPR019813 Translation initiation factor 3, conserved site BEN78_01770 IPR001288 Translation initiation factor 3 BEN78_01770 IPR019815 Translation initiation factor 3, C-terminal BEN78_01770 IPR019814 Translation initiation factor 3, N-terminal BEN78_01775 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) BEN78_01775 IPR006195 Aminoacyl-tRNA synthetase, class II BEN78_01775 IPR004154 Anticodon-binding BEN78_01775 IPR036621 Anticodon-binding domain superfamily BEN78_01775 IPR012947 Threonyl/alanyl tRNA synthetase, SAD BEN78_01775 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily BEN78_01775 IPR002320 Threonine-tRNA ligase, class IIa BEN78_01775 IPR012676 TGS-like BEN78_01775 IPR004095 TGS BEN78_01775 IPR012675 Beta-grasp domain superfamily BEN78_01775 IPR033728 Threonine-tRNA ligase catalytic core domain BEN78_01780 IPR000843 LacI-type HTH domain BEN78_01780 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BEN78_01780 IPR028082 Periplasmic binding protein-like I BEN78_01790 IPR014068 Azurin BEN78_01790 IPR000923 Blue (type 1) copper domain BEN78_01790 IPR028871 Blue (type 1) copper protein, binding site BEN78_01790 IPR008972 Cupredoxin BEN78_01795 IPR001117 Multicopper oxidase, type 1 BEN78_01795 IPR011707 Multicopper oxidase, type 3 BEN78_01795 IPR008972 Cupredoxin BEN78_01795 IPR001287 Nitrite reductase, copper-type BEN78_01795 IPR006311 Twin-arginine translocation pathway, signal sequence BEN78_01810 IPR016181 Acyl-CoA N-acyltransferase BEN78_01810 IPR000182 GNAT domain BEN78_01815 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site BEN78_01815 IPR000883 Cytochrome c oxidase subunit I BEN78_01815 IPR036927 Cytochrome c oxidase-like, subunit I superfamily BEN78_01815 IPR023616 Cytochrome c oxidase-like, subunit I domain BEN78_01825 IPR018490 Cyclic nucleotide-binding-like BEN78_01825 IPR036390 Winged helix DNA-binding domain superfamily BEN78_01825 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_01825 IPR018335 Transcription regulator HTH, Crp-type, conserved site BEN78_01825 IPR000595 Cyclic nucleotide-binding domain BEN78_01825 IPR012318 Crp-type HTH domain BEN78_01825 IPR014710 RmlC-like jelly roll fold BEN78_01830 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN BEN78_01830 IPR006638 Elp3/MiaB/NifB BEN78_01830 IPR023404 Radical SAM, alpha/beta horseshoe BEN78_01830 IPR010723 HemN, C-terminal BEN78_01830 IPR007197 Radical SAM BEN78_01830 IPR034505 Anaerobic coproporphyrinogen-III oxidase BEN78_01835 IPR031319 Alpha-amylase, C-terminal domain BEN78_01835 IPR013784 Carbohydrate-binding-like fold BEN78_01835 IPR017853 Glycoside hydrolase superfamily BEN78_01835 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BEN78_01835 IPR013780 Glycosyl hydrolase, all-beta BEN78_01835 IPR002044 Carbohydrate binding module family 20 BEN78_01835 IPR013783 Immunoglobulin-like fold BEN78_01845 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BEN78_01845 IPR013780 Glycosyl hydrolase, all-beta BEN78_01845 IPR017853 Glycoside hydrolase superfamily BEN78_01850 IPR040671 Pullulanase, N2 domain BEN78_01850 IPR017853 Glycoside hydrolase superfamily BEN78_01850 IPR013780 Glycosyl hydrolase, all-beta BEN78_01850 IPR004193 Glycoside hydrolase, family 13, N-terminal BEN78_01850 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BEN78_01850 IPR014756 Immunoglobulin E-set BEN78_01850 IPR011839 Alpha-1,6-glucosidases, pullulanase-type BEN78_01850 IPR041111 Pullulanase, Ins domain BEN78_01850 IPR005323 Pullulanase, carbohydrate-binding module 41 BEN78_01850 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal BEN78_01850 IPR013784 Carbohydrate-binding-like fold BEN78_01850 IPR013783 Immunoglobulin-like fold BEN78_01855 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_01855 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase BEN78_01855 IPR036291 NAD(P)-binding domain superfamily BEN78_01855 IPR020904 Short-chain dehydrogenase/reductase, conserved site BEN78_01865 IPR016291 Isochorismatase BEN78_01865 IPR009081 Phosphopantetheine binding ACP domain BEN78_01865 IPR036380 Isochorismatase-like superfamily BEN78_01865 IPR036736 ACP-like superfamily BEN78_01865 IPR000868 Isochorismatase-like BEN78_01870 IPR016291 Isochorismatase BEN78_01870 IPR000868 Isochorismatase-like BEN78_01870 IPR036380 Isochorismatase-like superfamily BEN78_01870 IPR009081 Phosphopantetheine binding ACP domain BEN78_01870 IPR036736 ACP-like superfamily BEN78_01875 IPR000873 AMP-dependent synthetase/ligase BEN78_01875 IPR025110 AMP-binding enzyme, C-terminal domain BEN78_01875 IPR020845 AMP-binding, conserved site BEN78_01875 IPR011963 2,3-dihydroxybenzoate-AMP ligase BEN78_01880 IPR015890 Chorismate-utilising enzyme, C-terminal BEN78_01880 IPR005801 ADC synthase BEN78_01880 IPR004561 Isochorismate synthase BEN78_01895 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_01895 IPR010917 TonB-dependent receptor, conserved site BEN78_01895 IPR010105 TonB-dependent siderophore receptor BEN78_01895 IPR039426 Vitamin B12 transporter BtuB-like BEN78_01895 IPR012910 TonB-dependent receptor, plug domain BEN78_01895 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_01895 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_01900 IPR029058 Alpha/Beta hydrolase fold BEN78_01900 IPR000801 Putative esterase BEN78_01910 IPR002491 ABC transporter periplasmic binding domain BEN78_01915 IPR000522 ABC transporter, permease protein, BtuC-like BEN78_01915 IPR037294 ABC transporter, BtuC-like BEN78_01920 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_01920 IPR003593 AAA+ ATPase domain BEN78_01920 IPR017871 ABC transporter, conserved site BEN78_01920 IPR003439 ABC transporter-like BEN78_01920 IPR015863 ABC transporter, hemin import, HmuV BEN78_01930 IPR011761 ATP-grasp fold BEN78_01930 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type BEN78_01930 IPR013815 ATP-grasp fold, subdomain 1 BEN78_01930 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain BEN78_01930 IPR011054 Rudiment single hybrid motif BEN78_01930 IPR016185 Pre-ATP-grasp domain superfamily BEN78_01930 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit BEN78_01935 IPR033747 Class I PurE BEN78_01935 IPR000031 PurE domain BEN78_01935 IPR024694 PurE, prokaryotic type BEN78_01935 IPR035893 PurE domain superfamily BEN78_01940 IPR005651 Trm112-like BEN78_01945 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal BEN78_01945 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily BEN78_01945 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal BEN78_01945 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD BEN78_01945 IPR004393 Nicotinate-nucleotide pyrophosphorylase BEN78_01945 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal BEN78_01945 IPR013785 Aldolase-type TIM barrel BEN78_01960 IPR034341 Stringent starvation protein A, N-terminal BEN78_01960 IPR036249 Thioredoxin-like superfamily BEN78_01960 IPR040079 Glutathione Transferase family BEN78_01960 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BEN78_01960 IPR004045 Glutathione S-transferase, N-terminal BEN78_01960 IPR004046 Glutathione S-transferase, C-terminal BEN78_01960 IPR010987 Glutathione S-transferase, C-terminal-like BEN78_01965 IPR009056 Cytochrome c-like domain BEN78_01965 IPR002326 Cytochrome c1 BEN78_01965 IPR036909 Cytochrome c-like domain superfamily BEN78_01970 IPR036150 Cytochrome b/b6, C-terminal domain superfamily BEN78_01970 IPR005798 Cytochrome b/b6, C-terminal BEN78_01970 IPR016174 Di-haem cytochrome, transmembrane BEN78_01970 IPR030689 Cytochrome b BEN78_01970 IPR027387 Cytochrome b/b6-like domain superfamily BEN78_01970 IPR005797 Cytochrome b/b6, N-terminal BEN78_01975 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit BEN78_01975 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal BEN78_01975 IPR005805 Rieske iron-sulphur protein, C-terminal BEN78_01975 IPR014349 Rieske iron-sulphur protein BEN78_01975 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily BEN78_01975 IPR017941 Rieske [2Fe-2S] iron-sulphur domain BEN78_01980 IPR023346 Lysozyme-like domain superfamily BEN78_01980 IPR000189 Prokaryotic transglycosylase, active site BEN78_01980 IPR008258 Transglycosylase SLT domain 1 BEN78_01985 IPR013848 Methylthiotransferase, N-terminal BEN78_01985 IPR020612 Methylthiotransferase, conserved site BEN78_01985 IPR005839 Methylthiotransferase BEN78_01985 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB BEN78_01985 IPR007197 Radical SAM BEN78_01985 IPR023404 Radical SAM, alpha/beta horseshoe BEN78_01985 IPR006638 Elp3/MiaB/NifB BEN78_01985 IPR002792 TRAM domain BEN78_01985 IPR038135 Methylthiotransferase, N-terminal domain superfamily BEN78_01990 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_01990 IPR017871 ABC transporter, conserved site BEN78_01990 IPR000412 ABC-2 transporter BEN78_01990 IPR003439 ABC transporter-like BEN78_01990 IPR003593 AAA+ ATPase domain BEN78_01995 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_01995 IPR017871 ABC transporter, conserved site BEN78_01995 IPR003439 ABC transporter-like BEN78_01995 IPR000412 ABC-2 transporter BEN78_01995 IPR003593 AAA+ ATPase domain BEN78_02005 IPR001647 DNA-binding HTH domain, TetR-type BEN78_02005 IPR013572 Transcription regulator MAATS, C-terminal BEN78_02005 IPR009057 Homeobox-like domain superfamily BEN78_02005 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BEN78_02005 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BEN78_02010 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_02010 IPR003714 PhoH-like protein BEN78_02020 IPR020549 Endoribonuclease YbeY, conserved site BEN78_02020 IPR023091 Metalloprotease catalytic domain superfamily, predicted BEN78_02020 IPR002036 Endoribonuclease YbeY BEN78_02030 IPR036318 FAD-binding, type PCMH-like superfamily BEN78_02030 IPR005170 Transporter-associated domain BEN78_02030 IPR016169 FAD-binding, type PCMH, subdomain 2 BEN78_02030 IPR000644 CBS domain BEN78_02040 IPR017853 Glycoside hydrolase superfamily BEN78_02040 IPR029483 Glycosyl-hydrolase 97, C-terminal oligomerisation domain BEN78_02040 IPR029486 Glycosyl-hydrolase 97, N-terminal domain BEN78_02040 IPR013785 Aldolase-type TIM barrel BEN78_02040 IPR019563 Glycosyl-hydrolase 97, catalytic domain BEN78_02040 IPR014718 Glycoside hydrolase-type carbohydrate-binding BEN78_02040 IPR013780 Glycosyl hydrolase, all-beta BEN78_02050 IPR010331 Exopolysaccharide synthesis, ExoD BEN78_02055 IPR003706 CstA, N-terminal domain BEN78_02055 IPR025299 CstA, C-terminal domain BEN78_02060 IPR007423 Selenoprotein, putative BEN78_02075 IPR011042 Six-bladed beta-propeller, TolB-like BEN78_02075 IPR011659 WD40-like Beta Propeller BEN78_02075 IPR029058 Alpha/Beta hydrolase fold BEN78_02075 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain BEN78_02075 IPR002469 Dipeptidylpeptidase IV, N-terminal domain BEN78_02075 IPR015943 WD40/YVTN repeat-like-containing domain superfamily BEN78_02080 IPR011042 Six-bladed beta-propeller, TolB-like BEN78_02080 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain BEN78_02080 IPR029058 Alpha/Beta hydrolase fold BEN78_02085 IPR005279 Dipeptide/tripeptide permease BEN78_02085 IPR020846 Major facilitator superfamily domain BEN78_02085 IPR036259 MFS transporter superfamily BEN78_02085 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site BEN78_02085 IPR000109 Proton-dependent oligopeptide transporter family BEN78_02095 IPR012549 Phosphoethanolamine transferase, N-terminal BEN78_02095 IPR017850 Alkaline-phosphatase-like, core domain superfamily BEN78_02095 IPR040423 Phosphoethanolamine transferase BEN78_02095 IPR000917 Sulfatase, N-terminal BEN78_02100 IPR001867 OmpR/PhoB-type DNA-binding domain BEN78_02100 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_02100 IPR039420 Transcriptional regulatory protein WalR-like BEN78_02100 IPR001789 Signal transduction response regulator, receiver domain BEN78_02100 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response BEN78_02100 IPR011006 CheY-like superfamily BEN78_02105 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BEN78_02105 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BEN78_02105 IPR005467 Histidine kinase domain BEN78_02105 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_02105 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_02105 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BEN78_02110 IPR033718 Diacylglycerol kinase, prokaryotic BEN78_02110 IPR036945 Diacylglycerol kinase (DAGK) superfamily BEN78_02110 IPR000829 DAGK family BEN78_02115 IPR011344 Single-stranded DNA-binding protein BEN78_02115 IPR000424 Primosome PriB/single-strand DNA-binding BEN78_02115 IPR012340 Nucleic acid-binding, OB-fold BEN78_02120 IPR033749 Polyprenyl synthetase, conserved site BEN78_02120 IPR000092 Polyprenyl synthetase BEN78_02120 IPR008949 Isoprenoid synthase domain superfamily BEN78_02145 IPR036393 Acetylglutamate kinase-like superfamily BEN78_02145 IPR002912 ACT domain BEN78_02145 IPR041745 Lysine-sensitive aspartokinase 3, N-terminal catalytic domain BEN78_02145 IPR001048 Aspartate/glutamate/uridylate kinase BEN78_02145 IPR018042 Aspartate kinase, conserved site BEN78_02145 IPR005260 Aspartate kinase, monofunctional class BEN78_02145 IPR001341 Aspartate kinase BEN78_02150 IPR003719 Phenazine biosynthesis PhzF protein BEN78_02155 IPR019904 Peroxiredoxin OsmC BEN78_02155 IPR036102 OsmC/Ohr superfamily BEN78_02155 IPR003718 OsmC/Ohr family BEN78_02155 IPR015946 K homology domain-like, alpha/beta BEN78_02170 IPR016047 Peptidase M23 BEN78_02170 IPR011055 Duplicated hybrid motif BEN78_02195 IPR030489 Transcription regulator Rrf2-type, conserved site BEN78_02195 IPR000944 Transcription regulator Rrf2-type BEN78_02195 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_02195 IPR010242 Transcription factor HTH, IscR BEN78_02195 IPR036390 Winged helix DNA-binding domain superfamily BEN78_02200 IPR000825 SUF system FeS cluster assembly, SufBD BEN78_02200 IPR037284 SUF system FeS cluster assembly, SufBD superfamily BEN78_02200 IPR010231 SUF system FeS cluster assembly, SufB BEN78_02205 IPR017871 ABC transporter, conserved site BEN78_02205 IPR003593 AAA+ ATPase domain BEN78_02205 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_02205 IPR003439 ABC transporter-like BEN78_02205 IPR010230 FeS cluster assembly SUF system, ATPase SufC BEN78_02215 IPR000192 Aminotransferase class V domain BEN78_02215 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BEN78_02215 IPR010970 Cysteine desulfurase, SufS BEN78_02215 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_02215 IPR016454 Cysteine desulfurase BEN78_02215 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BEN78_02215 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BEN78_02225 IPR017941 Rieske [2Fe-2S] iron-sulphur domain BEN78_02225 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily BEN78_02235 IPR010917 TonB-dependent receptor, conserved site BEN78_02235 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_02235 IPR010916 TonB box, conserved site BEN78_02235 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_02235 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_02235 IPR012910 TonB-dependent receptor, plug domain BEN78_02235 IPR039426 Vitamin B12 transporter BtuB-like BEN78_02245 IPR004509 Competence protein ComEA, helix-hairpin-helix domain BEN78_02245 IPR010994 RuvA domain 2-like BEN78_02245 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 BEN78_02250 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site BEN78_02250 IPR036264 Bacterial exopeptidase dimerisation domain BEN78_02250 IPR011650 Peptidase M20, dimerisation domain BEN78_02250 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria BEN78_02250 IPR002933 Peptidase M20 BEN78_02255 IPR000957 Sulphate/thiosulphate-binding, conserved site BEN78_02255 IPR005669 Thiosulphate/Sulfate-binding protein BEN78_02255 IPR034408 Sulphate/thiosulphate-binding site BEN78_02260 IPR005835 Nucleotidyl transferase domain BEN78_02260 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_02270 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site BEN78_02270 IPR002930 Glycine cleavage system H-protein BEN78_02270 IPR033753 Glycine cleavage system H-protein/Simiate BEN78_02270 IPR017453 Glycine cleavage system H-protein, subgroup BEN78_02270 IPR000089 Biotin/lipoyl attachment BEN78_02270 IPR011053 Single hybrid motif BEN78_02275 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain BEN78_02275 IPR022903 Glycine cleavage system T protein, bacteria BEN78_02275 IPR028896 Aminomethyltransferase-like BEN78_02275 IPR006222 Aminomethyltransferase, folate-binding domain BEN78_02275 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal BEN78_02275 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 BEN78_02275 IPR006223 Glycine cleavage system T protein BEN78_02285 IPR001107 Band 7 domain BEN78_02285 IPR018080 Band 7/stomatin-like, conserved site BEN78_02285 IPR036013 Band 7/SPFH domain superfamily BEN78_02285 IPR001972 Stomatin family BEN78_02285 IPR032435 Band 7, C-terminal extension BEN78_02300 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_02300 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor BEN78_02300 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_02300 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_02300 IPR012910 TonB-dependent receptor, plug domain BEN78_02300 IPR011276 TonB-dependent haem/haemoglobin receptor BEN78_02300 IPR010916 TonB box, conserved site BEN78_02300 IPR039426 Vitamin B12 transporter BtuB-like BEN78_02310 IPR023210 NADP-dependent oxidoreductase domain BEN78_02310 IPR036812 NADP-dependent oxidoreductase domain superfamily BEN78_02315 IPR008276 Concentrative nucleoside transporter BEN78_02315 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial BEN78_02315 IPR002668 Concentrative nucleoside transporter N-terminal domain BEN78_02315 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain BEN78_02315 IPR011657 Concentrative nucleoside transporter C-terminal domain BEN78_02320 IPR029056 Ribokinase-like BEN78_02320 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site BEN78_02320 IPR011877 Ribokinase BEN78_02320 IPR011611 Carbohydrate kinase PfkB BEN78_02320 IPR002139 Ribokinase/fructokinase BEN78_02330 IPR013785 Aldolase-type TIM barrel BEN78_02330 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal BEN78_02330 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 BEN78_02330 IPR001269 tRNA-dihydrouridine synthase BEN78_02330 IPR018517 tRNA-dihydrouridine synthase, conserved site BEN78_02330 IPR035587 DUS-like, FMN-binding domain BEN78_02330 IPR032887 tRNA-dihydrouridine synthase B BEN78_02340 IPR007280 Peptidase, C-terminal, archaeal/bacterial BEN78_02340 IPR036852 Peptidase S8/S53 domain superfamily BEN78_02340 IPR023827 Peptidase S8, subtilisin, Asp-active site BEN78_02340 IPR022398 Peptidase S8, subtilisin, His-active site BEN78_02340 IPR023828 Peptidase S8, subtilisin, Ser-active site BEN78_02340 IPR015500 Peptidase S8, subtilisin-related BEN78_02340 IPR034176 Peptidase MprA-like catalytic domain BEN78_02340 IPR000209 Peptidase S8/S53 domain BEN78_02345 IPR022631 S-adenosylmethionine synthetase, conserved site BEN78_02345 IPR022628 S-adenosylmethionine synthetase, N-terminal BEN78_02345 IPR022629 S-adenosylmethionine synthetase, central domain BEN78_02345 IPR022630 S-adenosylmethionine synthetase, C-terminal BEN78_02345 IPR022636 S-adenosylmethionine synthetase superfamily BEN78_02345 IPR002133 S-adenosylmethionine synthetase BEN78_02350 IPR016450 Uncharacterised conserved protein UCP005522 BEN78_02350 IPR025841 Circularly permuted ATP-grasp type 2 BEN78_02370 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site BEN78_02370 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BEN78_02370 IPR042172 Adenosylhomocysteinase-like superfamily BEN78_02370 IPR000043 Adenosylhomocysteinase-like BEN78_02370 IPR036291 NAD(P)-binding domain superfamily BEN78_02385 IPR013785 Aldolase-type TIM barrel BEN78_02385 IPR023435 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit KbaZ BEN78_02385 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ-like BEN78_02390 IPR035464 AgaS, SIS domain BEN78_02390 IPR014180 Sugar isomerase, AgaS BEN78_02390 IPR035466 GlmS/AgaS, SIS domain 1 BEN78_02390 IPR001347 Sugar isomerase (SIS) BEN78_02405 IPR029041 FAD-linked oxidoreductase-like BEN78_02405 IPR004621 Eukaryotic-type methylenetetrahydrofolate reductase BEN78_02405 IPR003171 Methylenetetrahydrofolate reductase BEN78_02405 IPR004620 5,10-methylenetetrahydrofolate reductase BEN78_02415 IPR005467 Histidine kinase domain BEN78_02415 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BEN78_02415 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BEN78_02415 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_02415 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BEN78_02415 IPR003660 HAMP domain BEN78_02415 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_02420 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_02420 IPR011006 CheY-like superfamily BEN78_02420 IPR039420 Transcriptional regulatory protein WalR-like BEN78_02420 IPR001867 OmpR/PhoB-type DNA-binding domain BEN78_02420 IPR001789 Signal transduction response regulator, receiver domain BEN78_02430 IPR013815 ATP-grasp fold, subdomain 1 BEN78_02430 IPR013651 ATP-grasp fold, RimK-type BEN78_02430 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK BEN78_02430 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX BEN78_02430 IPR011761 ATP-grasp fold BEN78_02430 IPR041107 RimK, PreATP-grasp domain BEN78_02440 IPR001087 GDSL lipase/esterase BEN78_02440 IPR017186 Lipase, autotransporter EstA BEN78_02440 IPR008265 Lipase, GDSL, active site BEN78_02440 IPR005546 Autotransporter beta-domain BEN78_02440 IPR036709 Autotransporter beta-domain superfamily BEN78_02440 IPR036514 SGNH hydrolase superfamily BEN78_02440 IPR006315 Outer membrane autotransporter barrel BEN78_02450 IPR013785 Aldolase-type TIM barrel BEN78_02450 IPR033983 Thiazole synthase ThiG BEN78_02450 IPR008867 Thiazole synthase BEN78_02455 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type BEN78_02455 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_02475 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily BEN78_02475 IPR011234 Fumarylacetoacetase-like, C-terminal BEN78_02480 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L BEN78_02480 IPR036019 Gated mechanosensitive channel BEN78_02480 IPR001185 Large-conductance mechanosensitive channel BEN78_02480 IPR019823 Large-conductance mechanosensitive channel, conserved site BEN78_02490 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB BEN78_02490 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BEN78_02490 IPR013123 RNA 2-O ribose methyltransferase, substrate binding BEN78_02490 IPR001537 tRNA/rRNA methyltransferase, SpoU type BEN78_02490 IPR004441 RNA methyltransferase TrmH family BEN78_02490 IPR029064 50S ribosomal protein L30e-like BEN78_02490 IPR029028 Alpha/beta knot methyltransferases BEN78_02495 IPR001463 Sodium:alanine symporter BEN78_02505 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN78_02505 IPR001036 Acriflavin resistance protein BEN78_02510 IPR039562 Membrane fusion protein, biotin-lipoyl like domain BEN78_02510 IPR022824 Multidrug resistance protein MdtA BEN78_02510 IPR006143 RND efflux pump, membrane fusion protein BEN78_02515 IPR005856 Cysteine synthase BEN78_02515 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site BEN78_02515 IPR001926 Pyridoxal-phosphate dependent enzyme BEN78_02515 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BEN78_02515 IPR005859 Cysteine synthase CysK BEN78_02525 IPR002589 Macro domain BEN78_02530 IPR000741 Fructose-bisphosphate aldolase, class-I BEN78_02530 IPR013785 Aldolase-type TIM barrel BEN78_02530 IPR029768 Fructose-bisphosphate aldolase class-I active site BEN78_02535 IPR015806 Pyruvate kinase, insert domain superfamily BEN78_02535 IPR001697 Pyruvate kinase BEN78_02535 IPR015795 Pyruvate kinase, C-terminal BEN78_02535 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BEN78_02535 IPR036918 Pyruvate kinase, C-terminal domain superfamily BEN78_02535 IPR011037 Pyruvate kinase-like, insert domain superfamily BEN78_02535 IPR040442 Pyruvate kinase-like domain superfamily BEN78_02535 IPR015793 Pyruvate kinase, barrel BEN78_02535 IPR018209 Pyruvate kinase, active site BEN78_02545 IPR015824 Phosphoglycerate kinase, N-terminal BEN78_02545 IPR015911 Phosphoglycerate kinase, conserved site BEN78_02545 IPR001576 Phosphoglycerate kinase BEN78_02545 IPR036043 Phosphoglycerate kinase superfamily BEN78_02560 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain BEN78_02560 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain BEN78_02560 IPR036291 NAD(P)-binding domain superfamily BEN78_02560 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I BEN78_02560 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family BEN78_02560 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site BEN78_02565 IPR005618 Outer membrane protein, OmpW BEN78_02565 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BEN78_02575 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN78_02575 IPR001279 Metallo-beta-lactamase BEN78_02585 IPR005950 Molybdate ABC transporter, substrate-binding protein BEN78_02590 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BEN78_02590 IPR011867 Molybdate ABC transporter, permease protein BEN78_02590 IPR035906 MetI-like superfamily BEN78_02595 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_02595 IPR005116 Transport-associated OB, type 1 BEN78_02595 IPR011868 Molybdate ABC transporter, ATP-binding protein BEN78_02595 IPR004606 Molybdenum-pterin binding BEN78_02595 IPR008995 Molybdate/tungstate binding, C-terminal BEN78_02595 IPR017871 ABC transporter, conserved site BEN78_02595 IPR003439 ABC transporter-like BEN78_02595 IPR003593 AAA+ ATPase domain BEN78_02595 IPR015852 ABC transporter, molybdenum import, ModC BEN78_02610 IPR010105 TonB-dependent siderophore receptor BEN78_02610 IPR012910 TonB-dependent receptor, plug domain BEN78_02610 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_02610 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_02610 IPR010916 TonB box, conserved site BEN78_02610 IPR010917 TonB-dependent receptor, conserved site BEN78_02610 IPR039423 TonB-dependent receptor-like BEN78_02610 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_02625 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain BEN78_02625 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily BEN78_02625 IPR003702 Acetyl-CoA hydrolase/transferase BEN78_02625 IPR037171 NagB/RpiA transferase-like BEN78_02630 IPR002634 BolA protein BEN78_02630 IPR036065 BolA-like superfamily BEN78_02635 IPR005475 Transketolase-like, pyrimidine-binding domain BEN78_02635 IPR033247 Transketolase family BEN78_02635 IPR020826 Transketolase binding site BEN78_02635 IPR005474 Transketolase, N-terminal BEN78_02635 IPR005478 Transketolase, bacterial-like BEN78_02635 IPR033248 Transketolase, C-terminal domain BEN78_02635 IPR029061 Thiamin diphosphate-binding fold BEN78_02635 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II BEN78_02640 IPR018107 Sodium:dicarboxylate symporter, conserved site BEN78_02640 IPR036458 Sodium:dicarboxylate symporter superfamily BEN78_02640 IPR001991 Sodium:dicarboxylate symporter BEN78_02640 IPR033380 Glutamate-aspartate symport protein GltP/GltT BEN78_02645 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_02645 IPR010997 HRDC-like superfamily BEN78_02645 IPR018982 RQC domain BEN78_02645 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain BEN78_02645 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_02645 IPR002121 HRDC domain BEN78_02645 IPR001650 Helicase, C-terminal BEN78_02645 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN78_02645 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial BEN78_02645 IPR004589 DNA helicase, ATP-dependent, RecQ type BEN78_02645 IPR011545 DEAD/DEAH box helicase domain BEN78_02665 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BEN78_02665 IPR006664 Outer membrane protein, bacterial BEN78_02665 IPR002368 Outer membrane protein, OmpA BEN78_02665 IPR006665 OmpA-like domain BEN78_02665 IPR000498 Outer membrane protein OmpA-like, transmembrane domain BEN78_02665 IPR036737 OmpA-like domain superfamily BEN78_02665 IPR006690 Outer membrane protein, OmpA-like, conserved site BEN78_02670 IPR011006 CheY-like superfamily BEN78_02670 IPR001867 OmpR/PhoB-type DNA-binding domain BEN78_02670 IPR016032 Signal transduction response regulator, C-terminal effector BEN78_02670 IPR001789 Signal transduction response regulator, receiver domain BEN78_02670 IPR039420 Transcriptional regulatory protein WalR-like BEN78_02670 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_02675 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN78_02675 IPR013701 DEAD/H associated BEN78_02675 IPR001650 Helicase, C-terminal BEN78_02675 IPR003593 AAA+ ATPase domain BEN78_02675 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_02675 IPR011545 DEAD/DEAH box helicase domain BEN78_02690 IPR018317 Queuosine biosynthesis protein QueC BEN78_02690 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_02695 IPR024924 7-carboxy-7-deazaguanine synthase-like BEN78_02695 IPR007197 Radical SAM BEN78_02695 IPR013785 Aldolase-type TIM barrel BEN78_02705 IPR036737 OmpA-like domain superfamily BEN78_02705 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal BEN78_02705 IPR006690 Outer membrane protein, OmpA-like, conserved site BEN78_02705 IPR006665 OmpA-like domain BEN78_02705 IPR006664 Outer membrane protein, bacterial BEN78_02705 IPR039001 Peptidoglycan-associated lipoprotein BEN78_02710 IPR007195 TolB, N-terminal BEN78_02710 IPR014167 Tol-Pal system protein TolB BEN78_02710 IPR011659 WD40-like Beta Propeller BEN78_02710 IPR011042 Six-bladed beta-propeller, TolB-like BEN78_02710 IPR036752 TolB, N-terminal domain superfamily BEN78_02725 IPR014168 Tol-Pal system protein TolR BEN78_02725 IPR003400 Biopolymer transport protein ExbD/TolR BEN78_02730 IPR014163 Tol-Pal system, TolQ BEN78_02730 IPR002898 MotA/TolQ/ExbB proton channel BEN78_02735 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site BEN78_02735 IPR006683 Thioesterase domain BEN78_02735 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family BEN78_02735 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase BEN78_02735 IPR029069 HotDog domain superfamily BEN78_02740 IPR003593 AAA+ ATPase domain BEN78_02740 IPR041445 RuvB, AAA lid domain BEN78_02740 IPR004605 DNA helicase, Holliday junction RuvB-type BEN78_02740 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_02740 IPR008824 RuvB-like P-loop domain BEN78_02740 IPR008823 RuvB C-terminal winged helix domain BEN78_02740 IPR036390 Winged helix DNA-binding domain superfamily BEN78_02740 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_02745 IPR036661 Luciferase-like domain superfamily BEN78_02745 IPR011251 Luciferase-like domain BEN78_02745 IPR019949 Luciferase family oxidoreductase, group 1 BEN78_02780 IPR002830 UbiD decarboxylyase family BEN78_02780 IPR023677 UbiD decarboxylyase, bacteria BEN78_02780 IPR018486 Hemopexin, conserved site BEN78_02785 IPR000160 GGDEF domain BEN78_02785 IPR011006 CheY-like superfamily BEN78_02785 IPR029787 Nucleotide cyclase BEN78_02785 IPR001789 Signal transduction response regulator, receiver domain BEN78_02790 IPR003855 Potassium transporter BEN78_02790 IPR023051 Potassium uptake protein, low affinity, Kup BEN78_02795 IPR011114 Holliday junction DNA helicase RuvA, C-terminal BEN78_02795 IPR010994 RuvA domain 2-like BEN78_02795 IPR036267 RuvA, C-terminal domain superfamily BEN78_02795 IPR000085 Bacterial DNA recombination protein RuvA BEN78_02795 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial BEN78_02795 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 BEN78_02795 IPR012340 Nucleic acid-binding, OB-fold BEN78_02800 IPR002176 Crossover junction endodeoxyribonuclease RuvC BEN78_02800 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site BEN78_02800 IPR036397 Ribonuclease H superfamily BEN78_02800 IPR012337 Ribonuclease H-like superfamily BEN78_02805 IPR029072 YebC-like BEN78_02805 IPR017856 Integrase-like, N-terminal BEN78_02805 IPR002876 Transcriptional regulator TACO1-like BEN78_02805 IPR026564 Transcriptional regulator TACO1-like, domain 3 BEN78_02815 IPR018062 HTH domain AraC-type, conserved site BEN78_02815 IPR032783 AraC-type transcription regulator, ligand-binding domain BEN78_02815 IPR018060 DNA binding HTH domain, AraC-type BEN78_02815 IPR009057 Homeobox-like domain superfamily BEN78_02820 IPR003718 OsmC/Ohr family BEN78_02820 IPR015946 K homology domain-like, alpha/beta BEN78_02820 IPR019953 Organic hydroperoxide resistance protein famiy BEN78_02820 IPR036102 OsmC/Ohr superfamily BEN78_02830 IPR036280 Multiheme cytochrome superfamily BEN78_02830 IPR024717 Denitrification system component NapC/NirT/NrfH BEN78_02830 IPR011031 Multihaem cytochrome BEN78_02830 IPR005126 NapC/NirT cytochrome c, N-terminal BEN78_02830 IPR038266 NapC/NirT cytochrome c superfamily BEN78_02830 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT BEN78_02835 IPR036280 Multiheme cytochrome superfamily BEN78_02835 IPR011031 Multihaem cytochrome BEN78_02835 IPR005591 Nitrate reductase cytochrome c-type subunit NapB BEN78_02840 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BEN78_02840 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain BEN78_02840 IPR010051 Periplasmic nitrate reductase, large subunit BEN78_02840 IPR009010 Aspartate decarboxylase-like domain superfamily BEN78_02840 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain BEN78_02840 IPR006657 Molybdopterin dinucleotide-binding domain BEN78_02840 IPR006656 Molybdopterin oxidoreductase BEN78_02840 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site BEN78_02860 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) BEN78_02860 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type BEN78_02860 IPR006195 Aminoacyl-tRNA synthetase, class II BEN78_02860 IPR029351 GAD domain BEN78_02860 IPR012340 Nucleic acid-binding, OB-fold BEN78_02860 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb BEN78_02860 IPR004115 GAD-like domain superfamily BEN78_02860 IPR004524 Aspartate-tRNA ligase, type 1 BEN78_02870 IPR006311 Twin-arginine translocation pathway, signal sequence BEN78_02870 IPR012338 Beta-lactamase/transpeptidase-like BEN78_02870 IPR000871 Beta-lactamase, class-A BEN78_02870 IPR023650 Beta-lactamase, class-A active site BEN78_02875 IPR005119 LysR, substrate-binding BEN78_02875 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_02875 IPR036390 Winged helix DNA-binding domain superfamily BEN78_02875 IPR037420 HTH-type transcriptional activator AmpR, PBP2 BEN78_02875 IPR000847 Transcription regulator HTH, LysR BEN78_02885 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_02885 IPR003593 AAA+ ATPase domain BEN78_02885 IPR032781 ABC-transporter extension domain BEN78_02885 IPR003439 ABC transporter-like BEN78_02885 IPR017871 ABC transporter, conserved site BEN78_02890 IPR039426 Vitamin B12 transporter BtuB-like BEN78_02890 IPR010101 TonB-dependent vitamin B12 transporter BtuB BEN78_02890 IPR012910 TonB-dependent receptor, plug domain BEN78_02890 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_02890 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_02890 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_02890 IPR010916 TonB box, conserved site BEN78_02890 IPR010917 TonB-dependent receptor, conserved site BEN78_02895 IPR003148 Regulator of K+ conductance, N-terminal BEN78_02895 IPR036291 NAD(P)-binding domain superfamily BEN78_02895 IPR038770 Sodium/solute symporter superfamily BEN78_02895 IPR004771 K+/H+ exchanger BEN78_02895 IPR006153 Cation/H+ exchanger BEN78_02900 IPR013549 Domain of unknown function DUF1731 BEN78_02900 IPR036291 NAD(P)-binding domain superfamily BEN78_02900 IPR010099 Epimerase family protein SDR39U1 BEN78_02900 IPR001509 NAD-dependent epimerase/dehydratase BEN78_02905 IPR003593 AAA+ ATPase domain BEN78_02905 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_02905 IPR017730 Chaperonin ClpB BEN78_02905 IPR028299 ClpA/B, conserved site 2 BEN78_02905 IPR004176 Clp, N-terminal BEN78_02905 IPR041546 ClpA/ClpB, AAA lid domain BEN78_02905 IPR036628 Clp, N-terminal domain superfamily BEN78_02905 IPR003959 ATPase, AAA-type, core BEN78_02905 IPR019489 Clp ATPase, C-terminal BEN78_02905 IPR018368 ClpA/B, conserved site 1 BEN78_02905 IPR001270 ClpA/B family BEN78_02920 IPR012341 Six-hairpin glycosidase-like superfamily BEN78_02920 IPR011613 GH15-like domain BEN78_02920 IPR008928 Six-hairpin glycosidase superfamily BEN78_02925 IPR012766 Alpha,alpha-trehalose-phosphate synthase BEN78_02925 IPR001830 Glycosyl transferase, family 20 BEN78_02930 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN78_02930 IPR018146 Glyoxalase I, conserved site BEN78_02930 IPR004361 Glyoxalase I BEN78_02930 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BEN78_02930 IPR037523 Vicinal oxygen chelate (VOC) domain BEN78_02950 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_02950 IPR012910 TonB-dependent receptor, plug domain BEN78_02950 IPR039426 Vitamin B12 transporter BtuB-like BEN78_02950 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_02950 IPR010105 TonB-dependent siderophore receptor BEN78_02965 IPR017689 Outer membrane protein assembly factor BamD BEN78_02965 IPR039565 Outer membrane lipoprotein BamD-like BEN78_02965 IPR011990 Tetratricopeptide-like helical domain superfamily BEN78_02985 IPR012910 TonB-dependent receptor, plug domain BEN78_02985 IPR010105 TonB-dependent siderophore receptor BEN78_02985 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_02985 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_02985 IPR039423 TonB-dependent receptor-like BEN78_02985 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_02985 IPR030148 Catecholate siderophore receptor Fiu BEN78_03005 IPR001173 Glycosyltransferase 2-like BEN78_03005 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_03010 IPR001173 Glycosyltransferase 2-like BEN78_03010 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_03015 IPR023267 RNA (C5-cytosine) methyltransferase BEN78_03015 IPR006027 NusB/RsmB/TIM44 BEN78_03015 IPR004573 rRNA small subunit methyltransferase B BEN78_03015 IPR035926 NusB-like superfamily BEN78_03015 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type BEN78_03015 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site BEN78_03015 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_03020 IPR037022 Formyl transferase, C-terminal domain superfamily BEN78_03020 IPR005794 Methionyl-tRNA formyltransferase BEN78_03020 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain BEN78_03020 IPR002376 Formyl transferase, N-terminal BEN78_03020 IPR036477 Formyl transferase, N-terminal domain superfamily BEN78_03020 IPR001555 Phosphoribosylglycinamide formyltransferase, active site BEN78_03020 IPR011034 Formyl transferase-like, C-terminal domain superfamily BEN78_03020 IPR005793 Formyl transferase, C-terminal BEN78_03025 IPR036821 Peptide deformylase superfamily BEN78_03025 IPR023635 Peptide deformylase BEN78_03030 IPR036779 LysM domain superfamily BEN78_03030 IPR018392 LysM domain BEN78_03035 IPR003488 DNA recombination-mediator protein A BEN78_03035 IPR041614 DprA, winged helix domain BEN78_03035 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_03040 IPR007456 Smg BEN78_03050 IPR025589 Topoisomerase C-terminal repeat BEN78_03050 IPR013497 DNA topoisomerase, type IA, central BEN78_03050 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 BEN78_03050 IPR023405 DNA topoisomerase, type IA, core domain BEN78_03050 IPR003602 DNA topoisomerase, type IA, DNA-binding domain BEN78_03050 IPR005733 DNA topoisomerase I, bacterial-type BEN78_03050 IPR028612 DNA topoisomerase I, type IA BEN78_03050 IPR023406 DNA topoisomerase, type IA, active site BEN78_03050 IPR003601 DNA topoisomerase, type IA, domain 2 BEN78_03050 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 BEN78_03050 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 BEN78_03050 IPR000380 DNA topoisomerase, type IA BEN78_03050 IPR034149 DNA topoisomerase 1, TOPRIM domain BEN78_03050 IPR006171 TOPRIM domain BEN78_03055 IPR006070 YrdC-like domain BEN78_03055 IPR023535 Threonylcarbamoyl-AMP synthase BEN78_03055 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily BEN78_03060 IPR002489 Glutamate synthase, alpha subunit, C-terminal BEN78_03060 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily BEN78_03060 IPR029055 Nucleophile aminohydrolases, N-terminal BEN78_03060 IPR017932 Glutamine amidotransferase type 2 domain BEN78_03060 IPR006982 Glutamate synthase, central-N BEN78_03060 IPR002932 Glutamate synthase domain BEN78_03060 IPR013785 Aldolase-type TIM barrel BEN78_03065 IPR028261 Dihydroprymidine dehydrogenase domain II BEN78_03065 IPR009051 Alpha-helical ferredoxin BEN78_03065 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_03065 IPR023753 FAD/NAD(P)-binding domain BEN78_03065 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 BEN78_03085 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_03085 IPR036291 NAD(P)-binding domain superfamily BEN78_03085 IPR020904 Short-chain dehydrogenase/reductase, conserved site BEN78_03090 IPR037459 Rhamnogalacturonan acetylesterase RhgT-like BEN78_03090 IPR001087 GDSL lipase/esterase BEN78_03090 IPR036514 SGNH hydrolase superfamily BEN78_03100 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_03100 IPR020904 Short-chain dehydrogenase/reductase, conserved site BEN78_03100 IPR036291 NAD(P)-binding domain superfamily BEN78_03100 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase BEN78_03105 IPR011051 RmlC-like cupin domain superfamily BEN78_03105 IPR014710 RmlC-like jelly roll fold BEN78_03105 IPR021120 KduI/IolB isomerase BEN78_03105 IPR007045 5-keto 4-deoxyuronate isomerase BEN78_03105 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal BEN78_03110 IPR023588 Transcription regulator HTH, PurR BEN78_03110 IPR000843 LacI-type HTH domain BEN78_03110 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BEN78_03110 IPR028082 Periplasmic binding protein-like I BEN78_03115 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily BEN78_03115 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BEN78_03115 IPR006710 Glycoside hydrolase, family 43 BEN78_03115 IPR041542 Beta-xylosidase, C-terminal Concanavalin A-like domain BEN78_03120 IPR004363 Methylglyoxal synthase BEN78_03120 IPR036914 Methylglyoxal synthase-like domain superfamily BEN78_03120 IPR011607 Methylglyoxal synthase-like domain BEN78_03125 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit BEN78_03125 IPR004681 TRAP transporter large membrane protein DctM BEN78_03135 IPR038404 TRAP transporter solute receptor DctP superfamily BEN78_03135 IPR018389 TRAP transporter solute receptor DctP/TeaA BEN78_03135 IPR004682 TRAP transporter solute receptor, DctP family BEN78_03170 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site BEN78_03170 IPR011611 Carbohydrate kinase PfkB BEN78_03170 IPR029056 Ribokinase-like BEN78_03175 IPR029045 ClpP/crotonase-like domain superfamily BEN78_03175 IPR004634 Peptidase S49, protease IV BEN78_03175 IPR004635 Peptidase S49, SppA BEN78_03175 IPR002142 Peptidase S49 BEN78_03175 IPR033854 Signal peptide peptidase A BEN78_03180 IPR002528 Multi antimicrobial extrusion protein BEN78_03210 IPR006464 N-acetyltransferase RimI/Ard1 BEN78_03210 IPR016181 Acyl-CoA N-acyltransferase BEN78_03210 IPR000182 GNAT domain BEN78_03220 IPR000462 CDP-alcohol phosphatidyltransferase BEN78_03220 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase BEN78_03230 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain BEN78_03230 IPR004154 Anticodon-binding BEN78_03230 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) BEN78_03230 IPR006195 Aminoacyl-tRNA synthetase, class II BEN78_03230 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 BEN78_03230 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily BEN78_03230 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type BEN78_03230 IPR033730 Prokaryote proline-tRNA ligase core domain BEN78_03230 IPR036621 Anticodon-binding domain superfamily BEN78_03230 IPR002316 Proline-tRNA ligase, class IIa BEN78_03245 IPR030802 ABC transporter permease MalE BEN78_03245 IPR003453 ABC transport permease subunit MlaE, Proteobacteria BEN78_03250 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_03250 IPR003593 AAA+ ATPase domain BEN78_03250 IPR003439 ABC transporter-like BEN78_03250 IPR026253 Methionine import ATP-binding protein MetN BEN78_03250 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal BEN78_03250 IPR017871 ABC transporter, conserved site BEN78_03250 IPR018449 NIL domain BEN78_03250 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain BEN78_03255 IPR005586 ABC-type transport auxiliary lipoprotein component BEN78_03255 IPR003399 Mce/MlaD BEN78_03270 IPR004165 Coenzyme A transferase family I BEN78_03270 IPR012791 3-oxoacid CoA-transferase, subunit B BEN78_03270 IPR037171 NagB/RpiA transferase-like BEN78_03270 IPR004164 Coenzyme A transferase active site BEN78_03275 IPR004163 Coenzyme A transferase binding site BEN78_03275 IPR004165 Coenzyme A transferase family I BEN78_03275 IPR012792 3-oxoacid CoA-transferase, subunit A BEN78_03275 IPR037171 NagB/RpiA transferase-like BEN78_03280 IPR016066 Alpha-D-phosphohexomutase, conserved site BEN78_03280 IPR005841 Alpha-D-phosphohexomutase superfamily BEN78_03280 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I BEN78_03280 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III BEN78_03280 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II BEN78_03280 IPR005843 Alpha-D-phosphohexomutase, C-terminal BEN78_03280 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III BEN78_03280 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily BEN78_03285 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase BEN78_03285 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal BEN78_03285 IPR005835 Nucleotidyl transferase domain BEN78_03285 IPR014710 RmlC-like jelly roll fold BEN78_03285 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_03285 IPR011051 RmlC-like cupin domain superfamily BEN78_03290 IPR029903 RmlD-like substrate binding domain BEN78_03290 IPR005913 dTDP-4-dehydrorhamnose reductase family BEN78_03290 IPR036291 NAD(P)-binding domain superfamily BEN78_03295 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related BEN78_03295 IPR011051 RmlC-like cupin domain superfamily BEN78_03295 IPR014710 RmlC-like jelly roll fold BEN78_03300 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form BEN78_03300 IPR005835 Nucleotidyl transferase domain BEN78_03300 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_03305 IPR036291 NAD(P)-binding domain superfamily BEN78_03305 IPR005888 dTDP-glucose 4,6-dehydratase BEN78_03305 IPR016040 NAD(P)-binding domain BEN78_03310 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal BEN78_03310 IPR012255 Electron transfer flavoprotein, beta subunit BEN78_03310 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_03310 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal BEN78_03310 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site BEN78_03315 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal BEN78_03315 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_03315 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site BEN78_03315 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal BEN78_03315 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal BEN78_03315 IPR001308 Electron transfer flavoprotein alpha subunit/FixB BEN78_03315 IPR029035 DHS-like NAD/FAD-binding domain superfamily BEN78_03325 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BEN78_03325 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_03325 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme BEN78_03325 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BEN78_03335 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_03335 IPR003593 AAA+ ATPase domain BEN78_03335 IPR003439 ABC transporter-like BEN78_03350 IPR005857 Cystathionine beta-synthase BEN78_03350 IPR001926 Pyridoxal-phosphate dependent enzyme BEN78_03350 IPR000644 CBS domain BEN78_03350 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BEN78_03370 IPR001482 Type II/IV secretion system protein BEN78_03370 IPR006321 Pilus retraction protein PilT BEN78_03370 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_03370 IPR003593 AAA+ ATPase domain BEN78_03395 IPR023035 Ribosomal protein S9, bacterial/plastid BEN78_03395 IPR000754 Ribosomal protein S9 BEN78_03395 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BEN78_03395 IPR020568 Ribosomal protein S5 domain 2-type fold BEN78_03395 IPR020574 Ribosomal protein S9, conserved site BEN78_03400 IPR005822 Ribosomal protein L13 BEN78_03400 IPR036899 Ribosomal protein L13 superfamily BEN78_03400 IPR023563 Ribosomal protein L13, conserved site BEN78_03400 IPR005823 Ribosomal protein L13, bacterial-type BEN78_03405 IPR012347 Ferritin-like BEN78_03405 IPR011566 Ubiquinone biosynthesis protein Coq7 BEN78_03405 IPR009078 Ferritin-like superfamily BEN78_03410 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic BEN78_03410 IPR009165 S-adenosylmethionine decarboxylase, bacterial BEN78_03410 IPR016067 S-adenosylmethionine decarboxylase, core BEN78_03415 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_03415 IPR036390 Winged helix DNA-binding domain superfamily BEN78_03415 IPR018490 Cyclic nucleotide-binding-like BEN78_03415 IPR000595 Cyclic nucleotide-binding domain BEN78_03415 IPR012318 Crp-type HTH domain BEN78_03415 IPR014710 RmlC-like jelly roll fold BEN78_03415 IPR018335 Transcription regulator HTH, Crp-type, conserved site BEN78_03425 IPR002781 Transmembrane protein TauE-like BEN78_03435 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily BEN78_03435 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily BEN78_03435 IPR005940 Anthranilate phosphoribosyl transferase BEN78_03435 IPR000312 Glycosyl transferase, family 3 BEN78_03435 IPR017459 Glycosyl transferase family 3, N-terminal domain BEN78_03445 IPR017926 Glutamine amidotransferase BEN78_03445 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain BEN78_03445 IPR029062 Class I glutamine amidotransferase-like BEN78_03455 IPR006805 Anthranilate synthase component I, N-terminal BEN78_03455 IPR019999 Anthranilate synthase component I-like BEN78_03455 IPR005256 Anthranilate synthase component I, PabB-like BEN78_03455 IPR015890 Chorismate-utilising enzyme, C-terminal BEN78_03455 IPR005801 ADC synthase BEN78_03465 IPR013785 Aldolase-type TIM barrel BEN78_03465 IPR011060 Ribulose-phosphate binding barrel BEN78_03465 IPR026019 Ribulose-phosphate 3-epimerase BEN78_03465 IPR000056 Ribulose-phosphate 3-epimerase-like BEN78_03470 IPR036869 Chaperone J-domain superfamily BEN78_03470 IPR001623 DnaJ domain BEN78_03470 IPR007791 Co-chaperone DjlA, N-terminal BEN78_03470 IPR029024 TerB-like BEN78_03470 IPR023749 Co-chaperone DjlA BEN78_03475 IPR018236 SAICAR synthetase, conserved site BEN78_03475 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase BEN78_03475 IPR028923 SAICAR synthetase/ADE2, N-terminal BEN78_03480 IPR012338 Beta-lactamase/transpeptidase-like BEN78_03480 IPR001466 Beta-lactamase-related BEN78_03495 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal BEN78_03495 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit BEN78_03495 IPR005663 Monovalent cation proton antiporter subunit A BEN78_03495 IPR007182 Na+/H+ antiporter MnhB subunit-related protein BEN78_03495 IPR025383 Domain of unknown function DUF4040 BEN78_03495 IPR005281 Monovalent cation:proton antiporter, subunit B BEN78_03500 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like BEN78_03500 IPR006673 Mnh complex subunit C1 BEN78_03505 IPR004775 Na(+)/H(+) antiporter subunit D1 BEN78_03505 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit BEN78_03510 IPR002758 Na+/H+ antiporter subunit E BEN78_03515 IPR007208 Na(+)/H(+) antiporter subunit F-like BEN78_03520 IPR005133 Na+/H+ antiporter subunit G BEN78_03530 IPR005708 Homogentisate 1,2-dioxygenase BEN78_03530 IPR022950 Homogentisate 1,2-dioxygenase, bacterial BEN78_03530 IPR014710 RmlC-like jelly roll fold BEN78_03530 IPR011051 RmlC-like cupin domain superfamily BEN78_03535 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN78_03535 IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal BEN78_03535 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BEN78_03535 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal BEN78_03535 IPR037523 Vicinal oxygen chelate (VOC) domain BEN78_03535 IPR005956 4-hydroxyphenylpyruvate dioxygenase BEN78_03545 IPR005279 Dipeptide/tripeptide permease BEN78_03545 IPR000109 Proton-dependent oligopeptide transporter family BEN78_03545 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site BEN78_03545 IPR020846 Major facilitator superfamily domain BEN78_03545 IPR036259 MFS transporter superfamily BEN78_03560 IPR007627 RNA polymerase sigma-70 region 2 BEN78_03560 IPR039425 RNA polymerase sigma-70 like BEN78_03560 IPR013325 RNA polymerase sigma factor, region 2 BEN78_03560 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN78_03560 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_03560 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site BEN78_03560 IPR014284 RNA polymerase sigma-70 like domain BEN78_03560 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 BEN78_03570 IPR011540 AbgT, Proteobacteria BEN78_03570 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT BEN78_03580 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like BEN78_03580 IPR004981 Tryptophan 2,3-dioxygenase BEN78_03595 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_03595 IPR036291 NAD(P)-binding domain superfamily BEN78_03615 IPR002305 Aminoacyl-tRNA synthetase, class Ic BEN78_03615 IPR024109 Tryptophan-tRNA ligase, bacterial-type BEN78_03615 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_03615 IPR002306 Tryptophan-tRNA ligase BEN78_03615 IPR036913 YegP-like superfamily BEN78_03620 IPR008462 CsbD-like domain BEN78_03620 IPR036629 YjbJ superfamily BEN78_03620 IPR026042 Stress response protein YjbJ BEN78_03630 IPR014033 Arginase BEN78_03630 IPR023696 Ureohydrolase domain superfamily BEN78_03630 IPR006035 Ureohydrolase BEN78_03630 IPR020855 Ureohydrolase, manganese-binding site BEN78_03655 IPR004619 Type III pantothenate kinase BEN78_03675 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_03675 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BEN78_03675 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BEN78_03675 IPR038429 PhoQ Sensor superfamily BEN78_03675 IPR015014 PhoQ Sensor BEN78_03675 IPR003660 HAMP domain BEN78_03675 IPR005467 Histidine kinase domain BEN78_03675 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_03680 IPR011006 CheY-like superfamily BEN78_03680 IPR001867 OmpR/PhoB-type DNA-binding domain BEN78_03680 IPR039420 Transcriptional regulatory protein WalR-like BEN78_03680 IPR001789 Signal transduction response regulator, receiver domain BEN78_03680 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_03690 IPR004653 tRNA-dihydrouridine(20/20a) synthase BEN78_03690 IPR013785 Aldolase-type TIM barrel BEN78_03690 IPR018517 tRNA-dihydrouridine synthase, conserved site BEN78_03690 IPR035587 DUS-like, FMN-binding domain BEN78_03690 IPR001269 tRNA-dihydrouridine synthase BEN78_03700 IPR014756 Immunoglobulin E-set BEN78_03700 IPR013783 Immunoglobulin-like fold BEN78_03700 IPR017853 Glycoside hydrolase superfamily BEN78_03700 IPR011837 Glycogen debranching enzyme, GlgX type BEN78_03700 IPR013780 Glycosyl hydrolase, all-beta BEN78_03700 IPR004193 Glycoside hydrolase, family 13, N-terminal BEN78_03700 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BEN78_03710 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BEN78_03710 IPR017853 Glycoside hydrolase superfamily BEN78_03710 IPR012767 Maltooligosyl trehalose synthase BEN78_03715 IPR003385 Glycoside hydrolase, family 77 BEN78_03715 IPR017853 Glycoside hydrolase superfamily BEN78_03720 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) BEN78_03720 IPR013783 Immunoglobulin-like fold BEN78_03720 IPR014756 Immunoglobulin E-set BEN78_03720 IPR012768 Malto-oligosyltrehalose trehalohydrolase BEN78_03720 IPR017853 Glycoside hydrolase superfamily BEN78_03720 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BEN78_03720 IPR013780 Glycosyl hydrolase, all-beta BEN78_03720 IPR004193 Glycoside hydrolase, family 13, N-terminal BEN78_03725 IPR014756 Immunoglobulin E-set BEN78_03725 IPR013780 Glycosyl hydrolase, all-beta BEN78_03725 IPR004193 Glycoside hydrolase, family 13, N-terminal BEN78_03725 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BEN78_03725 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB BEN78_03725 IPR037439 1,4-alpha-glucan-branching enzyme BEN78_03725 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta BEN78_03725 IPR013783 Immunoglobulin-like fold BEN78_03725 IPR017853 Glycoside hydrolase superfamily BEN78_03730 IPR011835 Bacterial/plant glycogen synthase BEN78_03730 IPR013534 Starch synthase, catalytic domain BEN78_03730 IPR001296 Glycosyl transferase, family 1 BEN78_03750 IPR004498 Ribosomal protein L11 methyltransferase BEN78_03750 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_03760 IPR005412 DNA-binding protein Fis BEN78_03760 IPR009057 Homeobox-like domain superfamily BEN78_03760 IPR002197 DNA binding HTH domain, Fis-type BEN78_03765 IPR011607 Methylglyoxal synthase-like domain BEN78_03765 IPR024051 AICAR transformylase, duplicated domain superfamily BEN78_03765 IPR016193 Cytidine deaminase-like BEN78_03765 IPR002695 Bifunctional purine biosynthesis protein PurH-like BEN78_03765 IPR036914 Methylglyoxal synthase-like domain superfamily BEN78_03775 IPR016185 Pre-ATP-grasp domain superfamily BEN78_03775 IPR011054 Rudiment single hybrid motif BEN78_03775 IPR011761 ATP-grasp fold BEN78_03775 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily BEN78_03775 IPR000115 Phosphoribosylglycinamide synthetase BEN78_03775 IPR020559 Phosphoribosylglycinamide synthetase, conserved site BEN78_03775 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal BEN78_03775 IPR013815 ATP-grasp fold, subdomain 1 BEN78_03775 IPR020560 Phosphoribosylglycinamide synthetase, C-domain BEN78_03775 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BEN78_03780 IPR010020 Integral membrane protein, YccS/YhfK BEN78_03780 IPR032692 Integral membrane protein YccS, N-terminal BEN78_03780 IPR010019 Integral membrane protein, YccS BEN78_03785 IPR006683 Thioesterase domain BEN78_03785 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain BEN78_03785 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase BEN78_03785 IPR029069 HotDog domain superfamily BEN78_03790 IPR011701 Major facilitator superfamily BEN78_03790 IPR023727 Lysophospholipid transporter LplT BEN78_03790 IPR036259 MFS transporter superfamily BEN78_03805 IPR022925 NADH pyrophosphatase NudC BEN78_03805 IPR015376 Zinc ribbon, NADH pyrophosphatase BEN78_03805 IPR015797 NUDIX hydrolase-like domain superfamily BEN78_03805 IPR000086 NUDIX hydrolase domain BEN78_03805 IPR015375 NADH pyrophosphatase-like, N-terminal BEN78_03805 IPR020084 NUDIX hydrolase, conserved site BEN78_03810 IPR016092 FeS cluster insertion protein BEN78_03810 IPR017870 FeS cluster insertion, C-terminal, conserved site BEN78_03810 IPR023063 FeS cluster insertion protein ErpA BEN78_03810 IPR035903 HesB-like domain superfamily BEN78_03810 IPR000361 FeS cluster biogenesis BEN78_03825 IPR011006 CheY-like superfamily BEN78_03825 IPR001633 EAL domain BEN78_03825 IPR000160 GGDEF domain BEN78_03825 IPR029787 Nucleotide cyclase BEN78_03825 IPR001789 Signal transduction response regulator, receiver domain BEN78_03825 IPR035919 EAL domain superfamily BEN78_03830 IPR011006 CheY-like superfamily BEN78_03830 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BEN78_03830 IPR003660 HAMP domain BEN78_03830 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_03830 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain BEN78_03830 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BEN78_03830 IPR036641 HPT domain superfamily BEN78_03830 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_03830 IPR001789 Signal transduction response regulator, receiver domain BEN78_03830 IPR005467 Histidine kinase domain BEN78_03830 IPR019247 Histidine kinase BarA, N-terminal BEN78_03830 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BEN78_03835 IPR008331 Ferritin/DPS protein domain BEN78_03835 IPR009078 Ferritin-like superfamily BEN78_03835 IPR009040 Ferritin-like diiron domain BEN78_03835 IPR012347 Ferritin-like BEN78_03835 IPR002024 Bacterioferritin BEN78_03845 IPR015797 NUDIX hydrolase-like domain superfamily BEN78_03845 IPR020084 NUDIX hydrolase, conserved site BEN78_03845 IPR022927 RNA pyrophosphohydrolase RppH BEN78_03845 IPR000086 NUDIX hydrolase domain BEN78_03855 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain BEN78_03855 IPR029058 Alpha/Beta hydrolase fold BEN78_03855 IPR002470 Peptidase S9A, prolyl oligopeptidase BEN78_03855 IPR023302 Peptidase S9A, N-terminal domain BEN78_03860 IPR023302 Peptidase S9A, N-terminal domain BEN78_03860 IPR029058 Alpha/Beta hydrolase fold BEN78_03860 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain BEN78_03860 IPR002470 Peptidase S9A, prolyl oligopeptidase BEN78_03890 IPR022418 Porphobilinogen deaminase, C-terminal BEN78_03890 IPR000860 Porphobilinogen deaminase BEN78_03890 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily BEN78_03890 IPR022417 Porphobilinogen deaminase, N-terminal BEN78_03890 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site BEN78_03895 IPR001789 Signal transduction response regulator, receiver domain BEN78_03895 IPR007492 LytTR DNA-binding domain BEN78_03895 IPR011006 CheY-like superfamily BEN78_03905 IPR023725 Glucan biosynthesis glucosyltransferase H BEN78_03905 IPR001173 Glycosyltransferase 2-like BEN78_03905 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_03960 IPR017932 Glutamine amidotransferase type 2 domain BEN78_03960 IPR035466 GlmS/AgaS, SIS domain 1 BEN78_03960 IPR035490 GlmS/FrlB, SIS domain 2 BEN78_03960 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising BEN78_03960 IPR029055 Nucleophile aminohydrolases, N-terminal BEN78_03960 IPR001347 Sugar isomerase (SIS) BEN78_03975 IPR003439 ABC transporter-like BEN78_03975 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_03975 IPR017871 ABC transporter, conserved site BEN78_03975 IPR003593 AAA+ ATPase domain BEN78_03985 IPR025857 MacB-like periplasmic core domain BEN78_03985 IPR005085 Carbohydrate binding module family 25 BEN78_03985 IPR003838 ABC transporter permease protein domain BEN78_03990 IPR003593 AAA+ ATPase domain BEN78_03990 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_03990 IPR017911 ABC transporter, macrolide export, ATP-binding domain BEN78_03990 IPR017871 ABC transporter, conserved site BEN78_03990 IPR003838 ABC transporter permease protein domain BEN78_03990 IPR025857 MacB-like periplasmic core domain BEN78_03990 IPR003439 ABC transporter-like BEN78_03995 IPR003593 AAA+ ATPase domain BEN78_03995 IPR017911 ABC transporter, macrolide export, ATP-binding domain BEN78_03995 IPR025857 MacB-like periplasmic core domain BEN78_03995 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_03995 IPR003838 ABC transporter permease protein domain BEN78_03995 IPR017871 ABC transporter, conserved site BEN78_03995 IPR003439 ABC transporter-like BEN78_04000 IPR003838 ABC transporter permease protein domain BEN78_04000 IPR005085 Carbohydrate binding module family 25 BEN78_04000 IPR025857 MacB-like periplasmic core domain BEN78_04005 IPR003838 ABC transporter permease protein domain BEN78_04005 IPR025857 MacB-like periplasmic core domain BEN78_04005 IPR005085 Carbohydrate binding module family 25 BEN78_04015 IPR003838 ABC transporter permease protein domain BEN78_04015 IPR005085 Carbohydrate binding module family 25 BEN78_04015 IPR025857 MacB-like periplasmic core domain BEN78_04020 IPR003593 AAA+ ATPase domain BEN78_04020 IPR011006 CheY-like superfamily BEN78_04020 IPR009057 Homeobox-like domain superfamily BEN78_04020 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_04020 IPR002078 RNA polymerase sigma factor 54 interaction domain BEN78_04020 IPR001789 Signal transduction response regulator, receiver domain BEN78_04020 IPR025944 Sigma-54 interaction domain, conserved site BEN78_04020 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BEN78_04020 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BEN78_04025 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_04025 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_04025 IPR003660 HAMP domain BEN78_04025 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BEN78_04025 IPR005467 Histidine kinase domain BEN78_04025 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator BEN78_04045 IPR036737 OmpA-like domain superfamily BEN78_04045 IPR000498 Outer membrane protein OmpA-like, transmembrane domain BEN78_04045 IPR006690 Outer membrane protein, OmpA-like, conserved site BEN78_04045 IPR006665 OmpA-like domain BEN78_04045 IPR002368 Outer membrane protein, OmpA BEN78_04045 IPR006664 Outer membrane protein, bacterial BEN78_04045 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BEN78_04050 IPR025877 MobA-like NTP transferase BEN78_04050 IPR011004 Trimeric LpxA-like superfamily BEN78_04050 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_04050 IPR001451 Hexapeptide repeat BEN78_04050 IPR038009 GlmU, C-terminal LbH domain BEN78_04050 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase BEN78_04065 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain BEN78_04065 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit BEN78_04065 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal BEN78_04065 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily BEN78_04065 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal BEN78_04070 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily BEN78_04070 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal BEN78_04070 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain BEN78_04070 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site BEN78_04070 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_04070 IPR005722 ATP synthase, F1 complex, beta subunit BEN78_04070 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain BEN78_04070 IPR003593 AAA+ ATPase domain BEN78_04075 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily BEN78_04075 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site BEN78_04075 IPR000131 ATP synthase, F1 complex, gamma subunit BEN78_04080 IPR000793 ATP synthase, alpha subunit, C-terminal BEN78_04080 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain BEN78_04080 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily BEN78_04080 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain BEN78_04080 IPR005294 ATP synthase, F1 complex, alpha subunit BEN78_04080 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site BEN78_04080 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_04080 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily BEN78_04080 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily BEN78_04080 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain BEN78_04085 IPR000711 ATPase, OSCP/delta subunit BEN78_04085 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily BEN78_04090 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily BEN78_04090 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast BEN78_04090 IPR005864 ATP synthase, F0 complex, subunit b, bacterial BEN78_04095 IPR038662 F1F0 ATP synthase subunit C superfamily BEN78_04095 IPR002379 V-ATPase proteolipid subunit C-like domain BEN78_04095 IPR000454 ATP synthase, F0 complex, subunit C BEN78_04095 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast BEN78_04095 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site BEN78_04095 IPR035921 F/V-ATP synthase subunit C superfamily BEN78_04100 IPR023011 ATP synthase, F0 complex, subunit A, active site BEN78_04100 IPR000568 ATP synthase, F0 complex, subunit A BEN78_04100 IPR035908 ATP synthase, F0 complex, subunit A superfamily BEN78_04135 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I BEN78_04135 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_04135 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site BEN78_04135 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BEN78_04135 IPR006258 Dihydrolipoamide dehydrogenase BEN78_04135 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily BEN78_04135 IPR023753 FAD/NAD(P)-binding domain BEN78_04140 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain BEN78_04140 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site BEN78_04140 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex BEN78_04140 IPR036625 E3-binding domain superfamily BEN78_04140 IPR011053 Single hybrid motif BEN78_04140 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily BEN78_04140 IPR004167 Peripheral subunit-binding domain BEN78_04140 IPR000089 Biotin/lipoyl attachment BEN78_04145 IPR016181 Acyl-CoA N-acyltransferase BEN78_04145 IPR003010 Carbon-nitrogen hydrolase BEN78_04145 IPR036526 Carbon-nitrogen hydrolase superfamily BEN78_04145 IPR000182 GNAT domain BEN78_04145 IPR001110 Uncharacterised protein family UPF0012, conserved site BEN78_04170 IPR013154 Alcohol dehydrogenase, N-terminal BEN78_04170 IPR020843 Polyketide synthase, enoylreductase domain BEN78_04170 IPR013149 Alcohol dehydrogenase, C-terminal BEN78_04170 IPR036291 NAD(P)-binding domain superfamily BEN78_04170 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site BEN78_04170 IPR011032 GroES-like superfamily BEN78_04175 IPR035570 UPF0234, N-terminal BEN78_04175 IPR036183 YajQ-like superfamily BEN78_04175 IPR035571 UPF0234-like, C-terminal BEN78_04175 IPR007551 Protein of unknown function DUF520 BEN78_04195 IPR023500 Zinc transporter ZitB BEN78_04195 IPR027469 Cation efflux transmembrane domain superfamily BEN78_04195 IPR002524 Cation efflux protein BEN78_04195 IPR036837 Cation efflux protein, cytoplasmic domain superfamily BEN78_04200 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_04200 IPR001845 HTH ArsR-type DNA-binding domain BEN78_04200 IPR011991 ArsR-like helix-turn-helix domain BEN78_04200 IPR036390 Winged helix DNA-binding domain superfamily BEN78_04205 IPR029062 Class I glutamine amidotransferase-like BEN78_04205 IPR002818 DJ-1/PfpI BEN78_04205 IPR009057 Homeobox-like domain superfamily BEN78_04205 IPR018060 DNA binding HTH domain, AraC-type BEN78_04210 IPR006439 HAD hydrolase, subfamily IA BEN78_04210 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BEN78_04210 IPR023214 HAD superfamily BEN78_04210 IPR041492 Haloacid dehalogenase-like hydrolase BEN78_04210 IPR036412 HAD-like superfamily BEN78_04215 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ BEN78_04215 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA BEN78_04215 IPR029069 HotDog domain superfamily BEN78_04220 IPR016039 Thiolase-like BEN78_04220 IPR000794 Beta-ketoacyl synthase BEN78_04220 IPR014030 Beta-ketoacyl synthase, N-terminal BEN78_04220 IPR014031 Beta-ketoacyl synthase, C-terminal BEN78_04220 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BEN78_04220 IPR018201 Beta-ketoacyl synthase, active site BEN78_04225 IPR036986 RNA-binding S4 domain superfamily BEN78_04225 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain BEN78_04225 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site BEN78_04225 IPR020103 Pseudouridine synthase, catalytic domain superfamily BEN78_04225 IPR002942 RNA-binding S4 domain BEN78_04225 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F BEN78_04225 IPR006145 Pseudouridine synthase, RsuA/RluA BEN78_04230 IPR007848 Methyltransferase small domain BEN78_04230 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_04230 IPR023543 rRNA small subunit methyltransferase C BEN78_04230 IPR013675 Methyltransferase small, N-terminal BEN78_04230 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BEN78_04240 IPR038766 Membrane component of ABC transporter, predicted BEN78_04245 IPR003593 AAA+ ATPase domain BEN78_04245 IPR003439 ABC transporter-like BEN78_04245 IPR017871 ABC transporter, conserved site BEN78_04245 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_04250 IPR013830 SGNH hydrolase-type esterase domain BEN78_04250 IPR036514 SGNH hydrolase superfamily BEN78_04255 IPR007340 Opacity-associated protein A BEN78_04255 IPR011055 Duplicated hybrid motif BEN78_04255 IPR016047 Peptidase M23 BEN78_04260 IPR005490 L,D-transpeptidase catalytic domain BEN78_04260 IPR018392 LysM domain BEN78_04260 IPR036779 LysM domain superfamily BEN78_04260 IPR038063 L,D-transpeptidase catalytic domain-like BEN78_04285 IPR036025 tRNA-splicing ligase RtcB-like superfamily BEN78_04285 IPR001233 tRNA-splicing ligase, RtcB BEN78_04295 IPR018093 BCCT transporter, conserved site BEN78_04295 IPR000060 BCCT transporter family BEN78_04325 IPR011703 ATPase, AAA-3 BEN78_04325 IPR041628 ChlI/MoxR, AAA lid domain BEN78_04325 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_04350 IPR001451 Hexapeptide repeat BEN78_04350 IPR011004 Trimeric LpxA-like superfamily BEN78_04355 IPR000917 Sulfatase, N-terminal BEN78_04355 IPR017850 Alkaline-phosphatase-like, core domain superfamily BEN78_04355 IPR012160 Lipoteichoic acid synthase-like BEN78_04360 IPR011006 CheY-like superfamily BEN78_04360 IPR001867 OmpR/PhoB-type DNA-binding domain BEN78_04360 IPR016032 Signal transduction response regulator, C-terminal effector BEN78_04360 IPR001789 Signal transduction response regulator, receiver domain BEN78_04360 IPR039420 Transcriptional regulatory protein WalR-like BEN78_04360 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_04365 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_04365 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BEN78_04365 IPR005467 Histidine kinase domain BEN78_04365 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_04365 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BEN78_04365 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BEN78_04370 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BEN78_04370 IPR020848 AP endonuclease 1, conserved site BEN78_04370 IPR037493 Exodeoxyribonuclease III-like BEN78_04370 IPR004808 AP endonuclease 1 BEN78_04370 IPR020847 AP endonuclease 1, binding site BEN78_04370 IPR005135 Endonuclease/exonuclease/phosphatase BEN78_04390 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_04390 IPR003682 rRNA small subunit methyltransferase G BEN78_04395 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_04395 IPR025669 AAA domain BEN78_04400 IPR041468 ParB/Spo0J, HTH domain BEN78_04400 IPR004437 ParB/RepB/Spo0J partition protein BEN78_04400 IPR003115 ParB/Sulfiredoxin BEN78_04400 IPR036086 ParB/Sulfiredoxin superfamily BEN78_04420 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA BEN78_04420 IPR001036 Acriflavin resistance protein BEN78_04420 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN78_04425 IPR004812 Drug resistance transporter Bcr/CmlA subfamily BEN78_04425 IPR036259 MFS transporter superfamily BEN78_04425 IPR011701 Major facilitator superfamily BEN78_04425 IPR020846 Major facilitator superfamily domain BEN78_04445 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_04445 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_04445 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_04445 IPR012910 TonB-dependent receptor, plug domain BEN78_04445 IPR010105 TonB-dependent siderophore receptor BEN78_04445 IPR039423 TonB-dependent receptor-like BEN78_04505 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_04505 IPR039426 Vitamin B12 transporter BtuB-like BEN78_04505 IPR012910 TonB-dependent receptor, plug domain BEN78_04505 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_04505 IPR010916 TonB box, conserved site BEN78_04505 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_04505 IPR010917 TonB-dependent receptor, conserved site BEN78_04505 IPR010101 TonB-dependent vitamin B12 transporter BtuB BEN78_04530 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal BEN78_04530 IPR004660 Pyruvate dehydrogenase E1 component BEN78_04530 IPR041621 Pyruvate dehydrogenase E1 component, middle domain BEN78_04530 IPR029061 Thiamin diphosphate-binding fold BEN78_04530 IPR005474 Transketolase, N-terminal BEN78_04530 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II BEN78_04535 IPR035965 PAS domain superfamily BEN78_04535 IPR003018 GAF domain BEN78_04535 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BEN78_04535 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BEN78_04535 IPR005467 Histidine kinase domain BEN78_04535 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_04535 IPR013654 PAS fold-2 BEN78_04535 IPR016132 Phytochrome chromophore attachment domain BEN78_04535 IPR001294 Phytochrome BEN78_04535 IPR013515 Phytochrome, central region BEN78_04535 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_04535 IPR000014 PAS domain BEN78_04535 IPR029016 GAF-like domain superfamily BEN78_04540 IPR001789 Signal transduction response regulator, receiver domain BEN78_04540 IPR011006 CheY-like superfamily BEN78_04550 IPR042112 Phosphate acetyltransferase, domain 2 BEN78_04550 IPR015884 Malic enzyme, conserved site BEN78_04550 IPR012301 Malic enzyme, N-terminal domain BEN78_04550 IPR037062 Malic enzyme, N-terminal domain superfamily BEN78_04550 IPR012302 Malic enzyme, NAD-binding BEN78_04550 IPR012188 NAD(P)-dependent malic enzyme BEN78_04550 IPR036291 NAD(P)-binding domain superfamily BEN78_04550 IPR042113 Phosphate acetyltransferase, domain 1 BEN78_04550 IPR002505 Phosphate acetyl/butaryl transferase BEN78_04555 IPR023614 Porin domain superfamily BEN78_04555 IPR010870 Phosphate-selective porin O/P BEN78_04565 IPR001991 Sodium:dicarboxylate symporter BEN78_04565 IPR018107 Sodium:dicarboxylate symporter, conserved site BEN78_04565 IPR036458 Sodium:dicarboxylate symporter superfamily BEN78_04565 IPR023954 C4-dicarboxylate transport protein BEN78_04575 IPR037952 Sensor histidine kinase TorS, sensor domain BEN78_04575 IPR003660 HAMP domain BEN78_04575 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_04575 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_04575 IPR005467 Histidine kinase domain BEN78_04575 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BEN78_04575 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BEN78_04575 IPR036641 HPT domain superfamily BEN78_04575 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BEN78_04575 IPR011006 CheY-like superfamily BEN78_04575 IPR001789 Signal transduction response regulator, receiver domain BEN78_04575 IPR038188 TorS, sensor domain superfamily BEN78_04575 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain BEN78_04585 IPR011006 CheY-like superfamily BEN78_04585 IPR000792 Transcription regulator LuxR, C-terminal BEN78_04585 IPR001789 Signal transduction response regulator, receiver domain BEN78_04585 IPR016032 Signal transduction response regulator, C-terminal effector BEN78_04590 IPR001789 Signal transduction response regulator, receiver domain BEN78_04590 IPR011006 CheY-like superfamily BEN78_04590 IPR000160 GGDEF domain BEN78_04590 IPR029787 Nucleotide cyclase BEN78_04600 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain BEN78_04600 IPR004881 Ribosome biogenesis GTPase RsgA BEN78_04600 IPR010914 RsgA GTPase domain BEN78_04600 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_04605 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BEN78_04605 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BEN78_04605 IPR004839 Aminotransferase, class I/classII BEN78_04605 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_04645 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain BEN78_04645 IPR012006 tRNA nucleotidyltransferase, proteobacteria BEN78_04645 IPR003607 HD/PDEase domain BEN78_04645 IPR006674 HD domain BEN78_04645 IPR002646 Poly A polymerase, head domain BEN78_04665 IPR001279 Metallo-beta-lactamase BEN78_04665 IPR001018 Beta-lactamase, class-B, conserved site BEN78_04665 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN78_04680 IPR011009 Protein kinase-like domain superfamily BEN78_04680 IPR002575 Aminoglycoside phosphotransferase BEN78_04690 IPR032466 Metal-dependent hydrolase BEN78_04690 IPR011059 Metal-dependent hydrolase, composite domain superfamily BEN78_04690 IPR006680 Amidohydrolase-related BEN78_04690 IPR003764 N-acetylglucosamine-6-phosphate deacetylase BEN78_04695 IPR035490 GlmS/FrlB, SIS domain 2 BEN78_04695 IPR001347 Sugar isomerase (SIS) BEN78_04695 IPR035466 GlmS/AgaS, SIS domain 1 BEN78_04695 IPR029055 Nucleophile aminohydrolases, N-terminal BEN78_04695 IPR017932 Glutamine amidotransferase type 2 domain BEN78_04695 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising BEN78_04700 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BEN78_04700 IPR028082 Periplasmic binding protein-like I BEN78_04700 IPR000843 LacI-type HTH domain BEN78_04705 IPR036259 MFS transporter superfamily BEN78_04705 IPR011701 Major facilitator superfamily BEN78_04705 IPR005964 Bacterial glucose/galactose transporter BEN78_04710 IPR003836 Glucokinase BEN78_04720 IPR017853 Glycoside hydrolase superfamily BEN78_04720 IPR029018 Beta-hexosaminidase-like, domain 2 BEN78_04720 IPR015883 Glycoside hydrolase family 20, catalytic domain BEN78_04720 IPR025705 Beta-hexosaminidase BEN78_04720 IPR011658 PA14 domain BEN78_04720 IPR037524 PA14/GLEYA domain BEN78_04720 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal BEN78_04735 IPR036291 NAD(P)-binding domain superfamily BEN78_04735 IPR020904 Short-chain dehydrogenase/reductase, conserved site BEN78_04735 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_04740 IPR029787 Nucleotide cyclase BEN78_04740 IPR000160 GGDEF domain BEN78_04740 IPR001789 Signal transduction response regulator, receiver domain BEN78_04740 IPR011006 CheY-like superfamily BEN78_04760 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase BEN78_04760 IPR036291 NAD(P)-binding domain superfamily BEN78_04770 IPR016039 Thiolase-like BEN78_04770 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 BEN78_04770 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal BEN78_04770 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BEN78_04775 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily BEN78_04775 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK BEN78_04780 IPR030192 Miniconductance mechanosensitive channel YbdG BEN78_04780 IPR011066 Mechanosensitive ion channel MscS, C-terminal BEN78_04780 IPR006685 Mechanosensitive ion channel MscS BEN78_04780 IPR010920 LSM domain superfamily BEN78_04785 IPR006157 Dihydroneopterin aldolase/epimerase domain BEN78_04785 IPR006156 Dihydroneopterin aldolase BEN78_04790 IPR017861 Kae1/TsaD family BEN78_04790 IPR000905 Gcp-like domain BEN78_04790 IPR017860 Peptidase M22, conserved site BEN78_04790 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD BEN78_04795 IPR001911 Ribosomal protein S21 BEN78_04795 IPR018278 Ribosomal protein S21, conserved site BEN78_04795 IPR038380 Ribosomal protein S21 superfamily BEN78_04800 IPR042184 YqeY/Aim41, N-terminal domain BEN78_04800 IPR019004 Uncharacterised protein YqeY/Aim41 BEN78_04800 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 BEN78_04800 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like BEN78_04805 IPR011055 Duplicated hybrid motif BEN78_04805 IPR016047 Peptidase M23 BEN78_04810 IPR011258 BPG-independent PGAM, N-terminal BEN78_04810 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent BEN78_04810 IPR017850 Alkaline-phosphatase-like, core domain superfamily BEN78_04810 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily BEN78_04810 IPR006124 Metalloenzyme BEN78_04825 IPR036412 HAD-like superfamily BEN78_04825 IPR023214 HAD superfamily BEN78_04825 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like BEN78_04835 IPR036986 RNA-binding S4 domain superfamily BEN78_04835 IPR002942 RNA-binding S4 domain BEN78_04835 IPR002307 Tyrosine-tRNA ligase BEN78_04835 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_04835 IPR002305 Aminoacyl-tRNA synthetase, class Ic BEN78_04835 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BEN78_04835 IPR024088 Tyrosine-tRNA ligase, bacterial-type BEN78_04835 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 BEN78_04840 IPR016047 Peptidase M23 BEN78_04840 IPR007340 Opacity-associated protein A BEN78_04840 IPR011055 Duplicated hybrid motif BEN78_04845 IPR005338 Anhydro-N-acetylmuramic acid kinase BEN78_04855 IPR006369 Protohaem IX farnesyltransferase BEN78_04855 IPR000537 UbiA prenyltransferase family BEN78_04855 IPR030470 UbiA prenyltransferase conserved site BEN78_04880 IPR000298 Cytochrome c oxidase subunit III-like BEN78_04880 IPR024791 Cytochrome c oxidase subunit III BEN78_04880 IPR033945 Cytochrome c oxidase subunit III domain BEN78_04880 IPR035973 Cytochrome c oxidase subunit III-like superfamily BEN78_04880 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle BEN78_04885 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily BEN78_04885 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 BEN78_04890 IPR000883 Cytochrome c oxidase subunit I BEN78_04890 IPR014241 Cytochrome c oxidase, subunit I bacterial type BEN78_04890 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site BEN78_04890 IPR033944 Cytochrome c oxidase subunit I domain BEN78_04890 IPR023616 Cytochrome c oxidase-like, subunit I domain BEN78_04890 IPR036927 Cytochrome c oxidase-like, subunit I superfamily BEN78_04895 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain BEN78_04895 IPR001505 Copper centre Cu(A) BEN78_04895 IPR034210 Cytochrome c oxidase subunit 2, C-terminal BEN78_04895 IPR008972 Cupredoxin BEN78_04895 IPR014222 Cytochrome c oxidase, subunit II BEN78_04895 IPR002429 Cytochrome c oxidase subunit II-like C-terminal BEN78_04895 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily BEN78_04900 IPR010985 Ribbon-helix-helix BEN78_04900 IPR002872 Proline dehydrogenase domain BEN78_04900 IPR015590 Aldehyde dehydrogenase domain BEN78_04900 IPR024082 Proline dehydrogenase PutA, domain II BEN78_04900 IPR013321 Arc-type ribbon-helix-helix BEN78_04900 IPR025703 Bifunctional protein PutA BEN78_04900 IPR016163 Aldehyde dehydrogenase, C-terminal BEN78_04900 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 BEN78_04900 IPR029041 FAD-linked oxidoreductase-like BEN78_04900 IPR016162 Aldehyde dehydrogenase, N-terminal BEN78_04900 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain BEN78_04900 IPR024090 Proline dehydrogenase PutA, domain I BEN78_04900 IPR029510 Aldehyde dehydrogenase, glutamic acid active site BEN78_04900 IPR016160 Aldehyde dehydrogenase, cysteine active site BEN78_04900 IPR016161 Aldehyde/histidinol dehydrogenase BEN78_04900 IPR024089 Proline dehydrogenase PutA, domain I/II BEN78_04910 IPR002109 Glutaredoxin BEN78_04910 IPR036249 Thioredoxin-like superfamily BEN78_04910 IPR004480 Monothiol glutaredoxin-related BEN78_04910 IPR014434 Monothiol glutaredoxin BEN78_04910 IPR033658 Glutaredoxin, PICOT-like BEN78_04915 IPR029787 Nucleotide cyclase BEN78_04915 IPR000160 GGDEF domain BEN78_04920 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_04920 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_04920 IPR005467 Histidine kinase domain BEN78_04920 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BEN78_04920 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BEN78_04920 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BEN78_04920 IPR000700 PAS-associated, C-terminal BEN78_04930 IPR007569 Protein of unknown function DUF559 BEN78_04930 IPR011335 Restriction endonuclease type II-like BEN78_04935 IPR006370 4-hydroxybenzoate polyprenyltransferase-like BEN78_04935 IPR039653 Prenyltransferase BEN78_04935 IPR030470 UbiA prenyltransferase conserved site BEN78_04935 IPR000537 UbiA prenyltransferase family BEN78_04940 IPR025669 AAA domain BEN78_04940 IPR005702 Exopolysaccharide synthesis protein BEN78_04940 IPR032807 Tyrosine kinase, G-rich domain BEN78_04940 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_04940 IPR003856 Polysaccharide chain length determinant N-terminal domain BEN78_04945 IPR017867 Protein-tyrosine phosphatase, low molecular weight BEN78_04945 IPR023485 Phosphotyrosine protein phosphatase I BEN78_04945 IPR036196 Phosphotyrosine protein phosphatase I superfamily BEN78_04955 IPR040716 Outer-membrane lipoprotein Wza, C-terminal domain BEN78_04955 IPR003715 Polysaccharide export protein BEN78_04955 IPR019554 Soluble ligand binding domain BEN78_04970 IPR010344 Exopolysaccharide biosynthesis protein YbjH BEN78_04975 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase BEN78_04975 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BEN78_04975 IPR036291 NAD(P)-binding domain superfamily BEN78_04975 IPR017476 UDP-glucose/GDP-mannose dehydrogenase BEN78_04975 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal BEN78_04975 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily BEN78_04975 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation BEN78_04975 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal BEN78_04985 IPR011004 Trimeric LpxA-like superfamily BEN78_04985 IPR001451 Hexapeptide repeat BEN78_04990 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BEN78_04990 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_04990 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BEN78_04990 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BEN78_05010 IPR001296 Glycosyl transferase, family 1 BEN78_05010 IPR011875 Alpha-maltose-1-phosphate synthase BEN78_05010 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain BEN78_05015 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BEN78_05015 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_05015 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BEN78_05015 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BEN78_05020 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_05020 IPR036291 NAD(P)-binding domain superfamily BEN78_05020 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain BEN78_05025 IPR003362 Bacterial sugar transferase BEN78_05025 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase BEN78_05040 IPR000715 Glycosyl transferase, family 4 BEN78_05040 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase BEN78_05045 IPR035466 GlmS/AgaS, SIS domain 1 BEN78_05045 IPR035490 GlmS/FrlB, SIS domain 2 BEN78_05045 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising BEN78_05045 IPR029055 Nucleophile aminohydrolases, N-terminal BEN78_05045 IPR001347 Sugar isomerase (SIS) BEN78_05045 IPR017932 Glutamine amidotransferase type 2 domain BEN78_05060 IPR029045 ClpP/crotonase-like domain superfamily BEN78_05060 IPR001478 PDZ domain BEN78_05060 IPR036034 PDZ superfamily BEN78_05060 IPR004447 C-terminal-processing peptidase S41A BEN78_05060 IPR005151 Tail specific protease BEN78_05075 IPR036291 NAD(P)-binding domain superfamily BEN78_05075 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_05075 IPR020904 Short-chain dehydrogenase/reductase, conserved site BEN78_05095 IPR009351 Protein of unknown function DUF1006 BEN78_05100 IPR002931 Transglutaminase-like BEN78_05100 IPR038765 Papain-like cysteine peptidase superfamily BEN78_05100 IPR013589 Bacterial transglutaminase-like, N-terminal BEN78_05105 IPR023720 Trehalase, periplasmic BEN78_05105 IPR008928 Six-hairpin glycosidase superfamily BEN78_05105 IPR012341 Six-hairpin glycosidase-like superfamily BEN78_05105 IPR001661 Glycoside hydrolase, family 37 BEN78_05105 IPR018232 Glycoside hydrolase, family 37, conserved site BEN78_05115 IPR000639 Epoxide hydrolase-like BEN78_05115 IPR000073 Alpha/beta hydrolase fold-1 BEN78_05115 IPR029058 Alpha/Beta hydrolase fold BEN78_05150 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN78_05150 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D BEN78_05150 IPR001279 Metallo-beta-lactamase BEN78_05160 IPR011201 Zinc-ribbon domain, bacteria BEN78_05160 IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase BEN78_05170 IPR014438 Glucan biosynthesis protein MdoG/MdoD BEN78_05170 IPR023724 Glucan biosynthesis, MdoD BEN78_05170 IPR014718 Glycoside hydrolase-type carbohydrate-binding BEN78_05170 IPR006311 Twin-arginine translocation pathway, signal sequence BEN78_05170 IPR011013 Galactose mutarotase-like domain superfamily BEN78_05170 IPR014756 Immunoglobulin E-set BEN78_05170 IPR013783 Immunoglobulin-like fold BEN78_05170 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal BEN78_05195 IPR023845 Domain of unknown function DUF3817, transmembrane BEN78_05195 IPR000731 Sterol-sensing domain BEN78_05195 IPR004869 Membrane transport protein MMPL domain BEN78_05215 IPR006001 Carbohydrate kinase, thermoresistant glucokinase BEN78_05215 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_05220 IPR006439 HAD hydrolase, subfamily IA BEN78_05220 IPR041492 Haloacid dehalogenase-like hydrolase BEN78_05220 IPR006549 HAD-superfamily hydrolase,subfamily IIIA BEN78_05220 IPR036412 HAD-like superfamily BEN78_05220 IPR023214 HAD superfamily BEN78_05220 IPR037512 Phosphoglycolate phosphatase, prokaryotic BEN78_05220 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic BEN78_05220 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BEN78_05230 IPR022880 DNA polymerase IV BEN78_05230 IPR017961 DNA polymerase, Y-family, little finger domain BEN78_05230 IPR036775 DNA polymerase, Y-family, little finger domain superfamily BEN78_05230 IPR001126 UmuC domain BEN78_05235 IPR011761 ATP-grasp fold BEN78_05235 IPR013815 ATP-grasp fold, subdomain 1 BEN78_05235 IPR003781 CoA-binding BEN78_05235 IPR036291 NAD(P)-binding domain superfamily BEN78_05235 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain BEN78_05235 IPR016181 Acyl-CoA N-acyltransferase BEN78_05235 IPR016102 Succinyl-CoA synthetase-like BEN78_05235 IPR000182 GNAT domain BEN78_05240 IPR036895 Uracil-DNA glycosylase-like domain superfamily BEN78_05240 IPR005273 Uracil-DNA glycosylase family 4 BEN78_05240 IPR005122 Uracil-DNA glycosylase-like BEN78_05245 IPR005116 Transport-associated OB, type 1 BEN78_05245 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_05245 IPR008995 Molybdate/tungstate binding, C-terminal BEN78_05245 IPR003725 Molybdenum-binding protein ModE, N-terminal BEN78_05245 IPR000847 Transcription regulator HTH, LysR BEN78_05245 IPR036390 Winged helix DNA-binding domain superfamily BEN78_05245 IPR004606 Molybdenum-pterin binding BEN78_05245 IPR016462 Molybdate-dependent transcriptional regulator ModE BEN78_05285 IPR024935 Rubredoxin domain BEN78_05285 IPR024934 Rubredoxin-like domain BEN78_05285 IPR018527 Rubredoxin, iron-binding site BEN78_05285 IPR024922 Rubredoxin BEN78_05290 IPR036206 Thiamin phosphate synthase superfamily BEN78_05290 IPR034291 Thiamine phosphate synthase BEN78_05290 IPR013785 Aldolase-type TIM barrel BEN78_05290 IPR022998 Thiamine phosphate synthase/TenI BEN78_05295 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BEN78_05295 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase BEN78_05295 IPR005814 Aminotransferase class-III BEN78_05295 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_05295 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BEN78_05300 IPR018490 Cyclic nucleotide-binding-like BEN78_05300 IPR028325 Voltage-gated potassium channel BEN78_05300 IPR018488 Cyclic nucleotide-binding, conserved site BEN78_05300 IPR000595 Cyclic nucleotide-binding domain BEN78_05300 IPR014710 RmlC-like jelly roll fold BEN78_05300 IPR005821 Ion transport domain BEN78_05310 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_05310 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BEN78_05310 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BEN78_05310 IPR004636 Acetylornithine/Succinylornithine transaminase family BEN78_05310 IPR005814 Aminotransferase class-III BEN78_05315 IPR020904 Short-chain dehydrogenase/reductase, conserved site BEN78_05315 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_05315 IPR036291 NAD(P)-binding domain superfamily BEN78_05335 IPR032818 DedA family BEN78_05335 IPR032816 SNARE associated Golgi protein BEN78_05350 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily BEN78_05350 IPR017630 4-oxalocrotonate decarboxylase BEN78_05355 IPR035685 4-hydroxy-2-oxovalerate aldolase, N-terminal catalytic TIM barrel domain BEN78_05355 IPR000891 Pyruvate carboxyltransferase BEN78_05355 IPR013785 Aldolase-type TIM barrel BEN78_05355 IPR017629 4-hydroxy-2-oxovalerate aldolase BEN78_05355 IPR012425 DmpG-like communication BEN78_05365 IPR011234 Fumarylacetoacetase-like, C-terminal BEN78_05365 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily BEN78_05370 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type BEN78_05370 IPR004370 4-oxalocrotonate tautomerase BEN78_05370 IPR014347 Tautomerase/MIF superfamily BEN78_05375 IPR020846 Major facilitator superfamily domain BEN78_05375 IPR005829 Sugar transporter, conserved site BEN78_05375 IPR011701 Major facilitator superfamily BEN78_05375 IPR036259 MFS transporter superfamily BEN78_05385 IPR005471 Transcription regulator IclR, N-terminal BEN78_05385 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_05385 IPR036390 Winged helix DNA-binding domain superfamily BEN78_05385 IPR014757 Transcription regulator IclR, C-terminal BEN78_05385 IPR029016 GAF-like domain superfamily BEN78_05390 IPR005757 Murein peptide ligase BEN78_05390 IPR013221 Mur ligase, central BEN78_05390 IPR000713 Mur ligase, N-terminal catalytic domain BEN78_05390 IPR004101 Mur ligase, C-terminal BEN78_05390 IPR036615 Mur ligase, C-terminal domain superfamily BEN78_05390 IPR036565 Mur-like, catalytic domain superfamily BEN78_05395 IPR006259 Adenylate kinase subfamily BEN78_05395 IPR033690 Adenylate kinase, conserved site BEN78_05395 IPR000850 Adenylate kinase/UMP-CMP kinase BEN78_05395 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_05400 IPR022953 ATP-dependent 6-phosphofructokinase BEN78_05400 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 BEN78_05400 IPR035966 Phosphofructokinase superfamily BEN78_05400 IPR000023 Phosphofructokinase domain BEN78_05410 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site BEN78_05410 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding BEN78_05410 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type BEN78_05410 IPR035937 MutM-like, N-terminal BEN78_05410 IPR010979 Ribosomal protein S13-like, H2TH BEN78_05410 IPR010663 Zinc finger, FPG/IleRS-type BEN78_05410 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain BEN78_05410 IPR020629 Formamidopyrimidine-DNA glycosylase BEN78_05415 IPR001267 Thymidine kinase BEN78_05415 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_05420 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_05420 IPR005752 ATP-dependent DNA helicase Rep BEN78_05420 IPR000212 DNA helicase, UvrD/REP type BEN78_05420 IPR014017 UvrD-like DNA helicase, C-terminal BEN78_05420 IPR014016 UvrD-like helicase, ATP-binding domain BEN78_05420 IPR034739 UvrD/AddA helicase, N-terminal BEN78_05420 IPR013986 DExx box DNA helicase domain superfamily BEN78_05425 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_05425 IPR007432 Protein of unknown function DUF480 BEN78_05425 IPR036390 Winged helix DNA-binding domain superfamily BEN78_05430 IPR005519 Acid phosphatase, class B-like BEN78_05430 IPR006423 5-nucleotidase lipoprotein e(P4) BEN78_05430 IPR036412 HAD-like superfamily BEN78_05430 IPR023214 HAD superfamily BEN78_05485 IPR040627 T3SS EscN ATPase, C-terminal BEN78_05485 IPR003593 AAA+ ATPase domain BEN78_05485 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_05485 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain BEN78_05485 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain BEN78_05485 IPR013380 ATPase, type III secretion system, H+-transporting BEN78_05485 IPR005714 ATPase, type III secretion system, FliI/YscN BEN78_05485 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site BEN78_05500 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ BEN78_05500 IPR006182 Secretory protein YscJ/FliF BEN78_05520 IPR042196 FHIPEP, domain 4 BEN78_05520 IPR042194 FHIPEP, domain 1 BEN78_05520 IPR042193 FHIPEP, domain 3 BEN78_05520 IPR006302 Type III secretion protein HrcV BEN78_05520 IPR001712 Type III secretion system FHIPEP BEN78_05520 IPR025505 FHIPEP conserved site BEN78_05530 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BEN78_05530 IPR000014 PAS domain BEN78_05530 IPR005467 Histidine kinase domain BEN78_05530 IPR001610 PAC motif BEN78_05530 IPR000700 PAS-associated, C-terminal BEN78_05530 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_05530 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BEN78_05530 IPR013767 PAS fold BEN78_05530 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BEN78_05530 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_05530 IPR035965 PAS domain superfamily BEN78_05535 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_05535 IPR011006 CheY-like superfamily BEN78_05535 IPR001789 Signal transduction response regulator, receiver domain BEN78_05535 IPR000792 Transcription regulator LuxR, C-terminal BEN78_05540 IPR001543 Surface presentation of antigen (SpoA) BEN78_05540 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb BEN78_05540 IPR036429 SpoA-like superfamily BEN78_05540 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO BEN78_05555 IPR002191 Bacterial export protein family 3 BEN78_05555 IPR006306 Type III secretion protein HrpO BEN78_05560 IPR002010 Type III secretion system inner membrane R protein BEN78_05560 IPR006304 Type III secretion protein SpaR/YscT BEN78_05565 IPR006307 Type III exporter system, secretion apparatus protein BsaZ BEN78_05565 IPR029025 Type III secretion system substrate exporter, C-terminal BEN78_05565 IPR006135 Type III secretion system substrate exporter BEN78_05585 IPR041728 GPAT/DHAPAT, acyltransferase domain BEN78_05585 IPR002123 Phospholipid/glycerol acyltransferase BEN78_05585 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase BEN78_05585 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB BEN78_05590 IPR000719 Protein kinase domain BEN78_05590 IPR017441 Protein kinase, ATP binding site BEN78_05590 IPR008271 Serine/threonine-protein kinase, active site BEN78_05590 IPR011009 Protein kinase-like domain superfamily BEN78_05590 IPR005543 PASTA domain BEN78_05610 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_05610 IPR017871 ABC transporter, conserved site BEN78_05610 IPR003593 AAA+ ATPase domain BEN78_05610 IPR003439 ABC transporter-like BEN78_05610 IPR032781 ABC-transporter extension domain BEN78_05615 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_05615 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type BEN78_05615 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase BEN78_05615 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal BEN78_05620 IPR007476 Putative exonuclease, RdgC BEN78_05630 IPR000639 Epoxide hydrolase-like BEN78_05630 IPR000073 Alpha/beta hydrolase fold-1 BEN78_05630 IPR029058 Alpha/Beta hydrolase fold BEN78_05630 IPR023489 Haloalkane dehalogenase, subfamily 1 BEN78_05635 IPR019772 Ferrochelatase, active site BEN78_05635 IPR033659 Ferrochelatase, N-terminal BEN78_05635 IPR033644 Ferrochelatase, C-terminal BEN78_05635 IPR001015 Ferrochelatase BEN78_05645 IPR003369 Sec-independent protein translocase protein TatA/B/E BEN78_05645 IPR006312 Sec-independent protein translocase protein TatA/E BEN78_05650 IPR018448 Twin-arginine translocation protein TatB BEN78_05650 IPR003369 Sec-independent protein translocase protein TatA/B/E BEN78_05655 IPR019820 Sec-independent periplasmic protein translocase, conserved site BEN78_05655 IPR002033 Sec-independent periplasmic protein translocase TatC BEN78_05670 IPR029062 Class I glutamine amidotransferase-like BEN78_05670 IPR017926 Glutamine amidotransferase BEN78_05670 IPR004739 GMP synthase, glutamine amidotransferase BEN78_05670 IPR022955 GMP synthase BEN78_05670 IPR025777 GMP synthetase ATP pyrophosphatase domain BEN78_05670 IPR022310 NAD/GMP synthase BEN78_05670 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_05670 IPR001674 GMP synthase, C-terminal BEN78_05680 IPR002310 Glycine-tRNA ligase, alpha subunit BEN78_05680 IPR006194 Glycine-tRNA synthetase, heterodimeric BEN78_05685 IPR015944 Glycine-tRNA ligase, beta subunit BEN78_05685 IPR006194 Glycine-tRNA synthetase, heterodimeric BEN78_05685 IPR008909 DALR anticodon binding BEN78_05690 IPR035243 TamA, POTRA domain 1 BEN78_05690 IPR034746 POTRA domain BEN78_05690 IPR039910 Surface antigen D15-like BEN78_05690 IPR010827 POTRA domain, BamA/TamA-like BEN78_05690 IPR000184 Bacterial surface antigen (D15) BEN78_05695 IPR007452 Translocation and assembly module TamB BEN78_05715 IPR023504 Bacteriohemerythrin-like protein BEN78_05715 IPR012312 Haemerythrin-like BEN78_05715 IPR016131 Haemerythrin, iron-binding site BEN78_05715 IPR035938 Hemerythrin-like superfamily BEN78_05715 IPR012827 Haemerythrin, metal-binding domain BEN78_05720 IPR007492 LytTR DNA-binding domain BEN78_05720 IPR000014 PAS domain BEN78_05720 IPR035965 PAS domain superfamily BEN78_05730 IPR010916 TonB box, conserved site BEN78_05730 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_05730 IPR010101 TonB-dependent vitamin B12 transporter BtuB BEN78_05730 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_05730 IPR010917 TonB-dependent receptor, conserved site BEN78_05730 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_05730 IPR012910 TonB-dependent receptor, plug domain BEN78_05730 IPR039426 Vitamin B12 transporter BtuB-like BEN78_05740 IPR017439 Amidohydrolase BEN78_05740 IPR036264 Bacterial exopeptidase dimerisation domain BEN78_05740 IPR002933 Peptidase M20 BEN78_05740 IPR011650 Peptidase M20, dimerisation domain BEN78_05745 IPR002781 Transmembrane protein TauE-like BEN78_05750 IPR013815 ATP-grasp fold, subdomain 1 BEN78_05750 IPR011054 Rudiment single hybrid motif BEN78_05750 IPR011761 ATP-grasp fold BEN78_05750 IPR001509 NAD-dependent epimerase/dehydratase BEN78_05750 IPR016185 Pre-ATP-grasp domain superfamily BEN78_05750 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type BEN78_05750 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase BEN78_05755 IPR042117 OMPP1/FadL/TodX superfamily BEN78_05755 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) BEN78_05770 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BEN78_05770 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_05770 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase BEN78_05775 IPR002323 Cytochrome c, class IE BEN78_05775 IPR036909 Cytochrome c-like domain superfamily BEN78_05775 IPR009056 Cytochrome c-like domain BEN78_05790 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_05790 IPR005654 ATPase, AFG1-like BEN78_05790 IPR030870 Cell division protein ZapE BEN78_05795 IPR010916 TonB box, conserved site BEN78_05795 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_05795 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_05795 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_05795 IPR012910 TonB-dependent receptor, plug domain BEN78_05795 IPR010101 TonB-dependent vitamin B12 transporter BtuB BEN78_05795 IPR039426 Vitamin B12 transporter BtuB-like BEN78_05795 IPR010917 TonB-dependent receptor, conserved site BEN78_05805 IPR000847 Transcription regulator HTH, LysR BEN78_05805 IPR036390 Winged helix DNA-binding domain superfamily BEN78_05805 IPR005119 LysR, substrate-binding BEN78_05805 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_05810 IPR005144 ATP-cone domain BEN78_05810 IPR013346 Ribonucleotide reductase, class I , alpha subunit BEN78_05810 IPR013509 Ribonucleotide reductase large subunit, N-terminal BEN78_05810 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal BEN78_05810 IPR039718 Ribonucleoside-diphosphate reductase large subunit BEN78_05810 IPR000788 Ribonucleotide reductase large subunit, C-terminal BEN78_05815 IPR033909 Ribonucleotide reductase small subunit BEN78_05815 IPR012348 Ribonucleotide reductase-like BEN78_05815 IPR009078 Ferritin-like superfamily BEN78_05815 IPR000358 Ribonucleotide reductase small subunit family BEN78_05845 IPR036390 Winged helix DNA-binding domain superfamily BEN78_05845 IPR001367 Iron dependent repressor, metal binding and dimerisation domain BEN78_05845 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily BEN78_05845 IPR022689 Iron dependent repressor BEN78_05845 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_05845 IPR022687 DTXR-type HTH domain BEN78_05850 IPR017871 ABC transporter, conserved site BEN78_05850 IPR003439 ABC transporter-like BEN78_05850 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_05850 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal BEN78_05850 IPR018449 NIL domain BEN78_05850 IPR003593 AAA+ ATPase domain BEN78_05850 IPR026253 Methionine import ATP-binding protein MetN BEN78_05850 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain BEN78_05855 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BEN78_05855 IPR035906 MetI-like superfamily BEN78_05860 IPR004872 Lipoprotein NlpA family BEN78_05865 IPR029058 Alpha/Beta hydrolase fold BEN78_05885 IPR032888 Histidine N-alpha-methyltransferase, Actinobacteria-type BEN78_05885 IPR019257 Histidine-specific methyltransferase, SAM-dependent BEN78_05885 IPR017804 Methyltransferase EgtD-like BEN78_05885 IPR035094 Histidine N-alpha-methyltransferase BEN78_05885 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_05890 IPR032890 Hercynine oxygenase, Actinobacteria BEN78_05890 IPR005532 Sulfatase-modifying factor enzyme BEN78_05890 IPR042095 Sulfatase-modifying factor enzyme superfamily BEN78_05890 IPR017806 Ergothioneine biosynthesis protein EgtB BEN78_05890 IPR034660 DinB/YfiT-like putative metalloenzymes BEN78_05890 IPR016187 C-type lectin fold BEN78_05890 IPR024775 DinB-like domain BEN78_05895 IPR006697 RecBCD enzyme subunit RecC BEN78_05895 IPR041500 RecC, C-terminal BEN78_05895 IPR011335 Restriction endonuclease type II-like BEN78_05895 IPR013986 DExx box DNA helicase domain superfamily BEN78_05895 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_05900 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type BEN78_05900 IPR011335 Restriction endonuclease type II-like BEN78_05900 IPR014016 UvrD-like helicase, ATP-binding domain BEN78_05900 IPR034739 UvrD/AddA helicase, N-terminal BEN78_05900 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_05900 IPR011604 Exonuclease, phage-type/RecB, C-terminal BEN78_05900 IPR000212 DNA helicase, UvrD/REP type BEN78_05900 IPR014017 UvrD-like DNA helicase, C-terminal BEN78_05900 IPR004586 RecBCD enzyme subunit RecB BEN78_05905 IPR027785 UvrD-like helicase C-terminal domain BEN78_05905 IPR006344 RecBCD enzyme subunit RecD BEN78_05905 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_05915 IPR021309 Protein of unknown function DUF2892 BEN78_05915 IPR001763 Rhodanese-like domain BEN78_05915 IPR036873 Rhodanese-like domain superfamily BEN78_05920 IPR001845 HTH ArsR-type DNA-binding domain BEN78_05920 IPR011991 ArsR-like helix-turn-helix domain BEN78_05920 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_05920 IPR036390 Winged helix DNA-binding domain superfamily BEN78_05925 IPR003779 Carboxymuconolactone decarboxylase-like BEN78_05925 IPR004675 Alkylhydroperoxidase AhpD core BEN78_05925 IPR029032 AhpD-like BEN78_05930 IPR001757 P-type ATPase BEN78_05930 IPR027256 P-type ATPase, subfamily IB BEN78_05930 IPR036163 Heavy metal-associated domain superfamily BEN78_05930 IPR017969 Heavy-metal-associated, conserved site BEN78_05930 IPR006122 Heavy metal-associated domain, copper ion-binding BEN78_05930 IPR023299 P-type ATPase, cytoplasmic domain N BEN78_05930 IPR006121 Heavy metal-associated domain, HMA BEN78_05930 IPR036412 HAD-like superfamily BEN78_05930 IPR008250 P-type ATPase, A domain superfamily BEN78_05930 IPR023298 P-type ATPase, transmembrane domain superfamily BEN78_05930 IPR023214 HAD superfamily BEN78_05930 IPR018303 P-type ATPase, phosphorylation site BEN78_05935 IPR009061 Putative DNA-binding domain superfamily BEN78_05935 IPR000551 MerR-type HTH domain BEN78_05935 IPR011789 Cu(I)-responsive transcriptional regulator BEN78_05935 IPR015358 Transcription regulator MerR, DNA binding BEN78_05965 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_05965 IPR039420 Transcriptional regulatory protein WalR-like BEN78_05965 IPR001789 Signal transduction response regulator, receiver domain BEN78_05965 IPR016032 Signal transduction response regulator, C-terminal effector BEN78_05965 IPR001867 OmpR/PhoB-type DNA-binding domain BEN78_05965 IPR011006 CheY-like superfamily BEN78_05970 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BEN78_05970 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BEN78_05970 IPR003660 HAMP domain BEN78_05970 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_05970 IPR005467 Histidine kinase domain BEN78_05970 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_05970 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BEN78_05980 IPR018636 Protein of unknown function DUF2058 BEN78_06030 IPR013740 Redoxin BEN78_06030 IPR036249 Thioredoxin-like superfamily BEN78_06030 IPR017937 Thioredoxin, conserved site BEN78_06030 IPR013766 Thioredoxin domain BEN78_06035 IPR036291 NAD(P)-binding domain superfamily BEN78_06035 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06035 IPR020904 Short-chain dehydrogenase/reductase, conserved site BEN78_06040 IPR005119 LysR, substrate-binding BEN78_06040 IPR000847 Transcription regulator HTH, LysR BEN78_06040 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_06040 IPR036390 Winged helix DNA-binding domain superfamily BEN78_06070 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BEN78_06075 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BEN78_06075 IPR001650 Helicase, C-terminal BEN78_06075 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN78_06075 IPR014014 RNA helicase, DEAD-box type, Q motif BEN78_06075 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_06075 IPR011545 DEAD/DEAH box helicase domain BEN78_06075 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain BEN78_06075 IPR028619 ATP-dependent RNA helicase DbpA BEN78_06075 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily BEN78_06085 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily BEN78_06085 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family BEN78_06090 IPR016185 Pre-ATP-grasp domain superfamily BEN78_06090 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain BEN78_06125 IPR020602 GTP cyclohydrolase I domain BEN78_06125 IPR018234 GTP cyclohydrolase I, conserved site BEN78_06125 IPR001474 GTP cyclohydrolase I BEN78_06130 IPR002781 Transmembrane protein TauE-like BEN78_06135 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_06135 IPR035684 Arginyl-tRNA synthetase, catalytic core domain BEN78_06135 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily BEN78_06135 IPR005148 Arginyl tRNA synthetase N-terminal domain BEN78_06135 IPR001278 Arginine-tRNA ligase BEN78_06135 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding BEN78_06135 IPR008909 DALR anticodon binding BEN78_06135 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BEN78_06145 IPR011978 Uncharacterised protein family UPF0149 BEN78_06145 IPR004027 SEC-C motif BEN78_06145 IPR036255 YgfB-like superfamily BEN78_06150 IPR036291 NAD(P)-binding domain superfamily BEN78_06150 IPR020904 Short-chain dehydrogenase/reductase, conserved site BEN78_06150 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06155 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal BEN78_06155 IPR041128 Arginine decarboxylase, C-terminal helical BEN78_06155 IPR029066 PLP-binding barrel BEN78_06155 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site BEN78_06155 IPR002985 Arginine decarboxylase BEN78_06155 IPR040634 Arginine decarboxylase, helical bundle domain BEN78_06155 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal BEN78_06155 IPR000183 Ornithine/DAP/Arg decarboxylase BEN78_06165 IPR030374 Polyamine biosynthesis domain BEN78_06165 IPR030373 Polyamine biosynthesis domain, conserved site BEN78_06165 IPR001045 Spermidine/spermine synthases BEN78_06165 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_06165 IPR037163 Spermidine synthase, tetramerisation domain superfamily BEN78_06165 IPR035246 Spermidine synthase, tetramerisation domain BEN78_06185 IPR011322 Nitrogen regulatory PII-like, alpha/beta BEN78_06185 IPR002187 Nitrogen regulatory protein PII BEN78_06185 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BEN78_06185 IPR017918 Nitrogen regulatory protein PII, conserved site BEN78_06185 IPR002332 Nitrogen regulatory protein P-II, urydylation site BEN78_06190 IPR007475 Ubiquinone biosynthesis accessory factor UbiK BEN78_06195 IPR001208 MCM domain BEN78_06195 IPR003593 AAA+ ATPase domain BEN78_06195 IPR004482 Mg chelatase-related protein BEN78_06195 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BEN78_06195 IPR020568 Ribosomal protein S5 domain 2-type fold BEN78_06195 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_06195 IPR025158 Mg chelatase-related protein, C-terminal domain BEN78_06195 IPR000523 Magnesium chelatase ChlI domain BEN78_06205 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain BEN78_06205 IPR011042 Six-bladed beta-propeller, TolB-like BEN78_06205 IPR029058 Alpha/Beta hydrolase fold BEN78_06215 IPR016194 SPOC-like, C-terminal domain superfamily BEN78_06215 IPR006164 Ku70/Ku80 beta-barrel domain BEN78_06215 IPR009187 Non-homologous end joining protein Ku, prokaryotic type BEN78_06225 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily BEN78_06225 IPR026891 Fibronectin type III-like domain BEN78_06225 IPR013783 Immunoglobulin-like fold BEN78_06225 IPR019800 Glycoside hydrolase, family 3, active site BEN78_06225 IPR017853 Glycoside hydrolase superfamily BEN78_06225 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily BEN78_06225 IPR002772 Glycoside hydrolase family 3 C-terminal domain BEN78_06225 IPR001764 Glycoside hydrolase, family 3, N-terminal BEN78_06235 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily BEN78_06235 IPR002502 N-acetylmuramoyl-L-alanine amidase domain BEN78_06250 IPR023827 Peptidase S8, subtilisin, Asp-active site BEN78_06250 IPR015500 Peptidase S8, subtilisin-related BEN78_06250 IPR007280 Peptidase, C-terminal, archaeal/bacterial BEN78_06250 IPR000209 Peptidase S8/S53 domain BEN78_06250 IPR036852 Peptidase S8/S53 domain superfamily BEN78_06250 IPR023828 Peptidase S8, subtilisin, Ser-active site BEN78_06250 IPR034176 Peptidase MprA-like catalytic domain BEN78_06250 IPR022398 Peptidase S8, subtilisin, His-active site BEN78_06255 IPR008640 Head domain of trimeric autotransporter adhesin BEN78_06255 IPR008635 Coiled stalk of trimeric autotransporter adhesin BEN78_06255 IPR024973 ESPR domain BEN78_06255 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_06255 IPR005594 YadA-like, C-terminal BEN78_06260 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_06260 IPR005467 Histidine kinase domain BEN78_06260 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_06260 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BEN78_06260 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BEN78_06260 IPR001789 Signal transduction response regulator, receiver domain BEN78_06260 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BEN78_06265 IPR001789 Signal transduction response regulator, receiver domain BEN78_06265 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_06265 IPR011006 CheY-like superfamily BEN78_06265 IPR001867 OmpR/PhoB-type DNA-binding domain BEN78_06265 IPR039420 Transcriptional regulatory protein WalR-like BEN78_06270 IPR024041 Ammonium transporter AmtB-like domain BEN78_06270 IPR001905 Ammonium transporter BEN78_06270 IPR029020 Ammonium/urea transporter BEN78_06270 IPR018047 Ammonium transporter, conserved site BEN78_06275 IPR002187 Nitrogen regulatory protein PII BEN78_06275 IPR011322 Nitrogen regulatory PII-like, alpha/beta BEN78_06275 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BEN78_06275 IPR017918 Nitrogen regulatory protein PII, conserved site BEN78_06275 IPR002332 Nitrogen regulatory protein P-II, urydylation site BEN78_06285 IPR027303 Glutamine synthetase, glycine-rich site BEN78_06285 IPR036651 Glutamine synthetase, N-terminal domain superfamily BEN78_06285 IPR008146 Glutamine synthetase, catalytic domain BEN78_06285 IPR008147 Glutamine synthetase, beta-Grasp domain BEN78_06285 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain BEN78_06285 IPR001637 Glutamine synthetase class-I, adenylation site BEN78_06285 IPR027302 Glutamine synthetase, N-terminal conserved site BEN78_06285 IPR004809 Glutamine synthetase type I BEN78_06290 IPR036390 Winged helix DNA-binding domain superfamily BEN78_06290 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BEN78_06290 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_06290 IPR011991 ArsR-like helix-turn-helix domain BEN78_06290 IPR000485 AsnC-type HTH domain BEN78_06290 IPR019888 Transcription regulator AsnC-type BEN78_06290 IPR019885 Transcription regulator HTH, AsnC-type, conserved site BEN78_06290 IPR011008 Dimeric alpha-beta barrel BEN78_06295 IPR001273 Aromatic amino acid hydroxylase BEN78_06295 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site BEN78_06295 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily BEN78_06295 IPR019774 Aromatic amino acid hydroxylase, C-terminal BEN78_06295 IPR005960 Phenylalanine-4-hydroxylase, monomeric form BEN78_06295 IPR036951 Aromatic amino acid hydroxylase superfamily BEN78_06300 IPR012910 TonB-dependent receptor, plug domain BEN78_06300 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_06300 IPR010105 TonB-dependent siderophore receptor BEN78_06300 IPR039426 Vitamin B12 transporter BtuB-like BEN78_06300 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_06300 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_06305 IPR011032 GroES-like superfamily BEN78_06305 IPR036291 NAD(P)-binding domain superfamily BEN78_06305 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site BEN78_06305 IPR013154 Alcohol dehydrogenase, N-terminal BEN78_06305 IPR013149 Alcohol dehydrogenase, C-terminal BEN78_06305 IPR020843 Polyketide synthase, enoylreductase domain BEN78_06310 IPR000792 Transcription regulator LuxR, C-terminal BEN78_06310 IPR011006 CheY-like superfamily BEN78_06310 IPR001789 Signal transduction response regulator, receiver domain BEN78_06310 IPR016032 Signal transduction response regulator, C-terminal effector BEN78_06315 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_06315 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain BEN78_06325 IPR004294 Carotenoid oxygenase BEN78_06335 IPR000796 Aspartate/other aminotransferase BEN78_06335 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site BEN78_06335 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BEN78_06335 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BEN78_06335 IPR004839 Aminotransferase, class I/classII BEN78_06335 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_06340 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal BEN78_06340 IPR028343 Fructose-1,6-bisphosphatase BEN78_06340 IPR000146 Fructose-1,6-bisphosphatase class 1 BEN78_06350 IPR001789 Signal transduction response regulator, receiver domain BEN78_06350 IPR011006 CheY-like superfamily BEN78_06355 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding BEN78_06355 IPR005467 Histidine kinase domain BEN78_06355 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily BEN78_06355 IPR004105 Histidine kinase CheA-like, homodimeric domain BEN78_06355 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_06355 IPR036641 HPT domain superfamily BEN78_06355 IPR035891 CheY-binding domain of CheA BEN78_06355 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BEN78_06355 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_06355 IPR002545 CheW-like domain BEN78_06355 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BEN78_06355 IPR036061 CheW-like domain superfamily BEN78_06355 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily BEN78_06355 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain BEN78_06365 IPR013785 Aldolase-type TIM barrel BEN78_06365 IPR006638 Elp3/MiaB/NifB BEN78_06365 IPR040086 Protein MJ0683-like BEN78_06365 IPR007197 Radical SAM BEN78_06370 IPR030874 Cardiolipin synthase, Firmicutes-type BEN78_06370 IPR001736 Phospholipase D/Transphosphatidylase BEN78_06370 IPR022924 Cardiolipin synthase BEN78_06370 IPR027379 Cardiolipin synthase N-terminal BEN78_06370 IPR025202 Phospholipase D-like domain BEN78_06385 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ BEN78_06385 IPR013785 Aldolase-type TIM barrel BEN78_06385 IPR036130 Pyridoxine 5'-phosphate synthase BEN78_06390 IPR003400 Biopolymer transport protein ExbD/TolR BEN78_06395 IPR003400 Biopolymer transport protein ExbD/TolR BEN78_06400 IPR002898 MotA/TolQ/ExbB proton channel BEN78_06415 IPR001915 Peptidase M48 BEN78_06420 IPR034160 DNA gyrase subunit B, TOPRIM domain BEN78_06420 IPR006171 TOPRIM domain BEN78_06420 IPR002288 DNA gyrase B subunit, C-terminal BEN78_06420 IPR013760 DNA topoisomerase, type IIA-like domain superfamily BEN78_06420 IPR001241 DNA topoisomerase, type IIA BEN78_06420 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BEN78_06420 IPR020568 Ribosomal protein S5 domain 2-type fold BEN78_06420 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_06420 IPR018522 DNA topoisomerase, type IIA, conserved site BEN78_06420 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_06420 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 BEN78_06420 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal BEN78_06420 IPR041423 DNA gyrase subunit B insert domain BEN78_06420 IPR011557 DNA gyrase, subunit B BEN78_06425 IPR018078 DNA-binding, RecF, conserved site BEN78_06425 IPR003395 RecF/RecN/SMC, N-terminal BEN78_06425 IPR001238 DNA-binding, RecF BEN78_06425 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_06425 IPR042174 DNA-binding RecF, domain 2 BEN78_06430 IPR022637 DNA polymerase III, beta sliding clamp, central BEN78_06430 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal BEN78_06430 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal BEN78_06430 IPR001001 DNA polymerase III, beta sliding clamp BEN78_06440 IPR000271 Ribosomal protein L34 BEN78_06440 IPR020939 Ribosomal protein L34, conserved site BEN78_06445 IPR020568 Ribosomal protein S5 domain 2-type fold BEN78_06445 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BEN78_06445 IPR020539 Ribonuclease P, conserved site BEN78_06445 IPR000100 Ribonuclease P BEN78_06450 IPR019998 Membrane insertase YidC BEN78_06450 IPR028055 Membrane insertase YidC/Oxa1, C-terminal BEN78_06450 IPR038221 YidC, periplasmic domain superfamily BEN78_06450 IPR038210 Membrane insertase YidC, periplasmic domain BEN78_06450 IPR028053 Membrane insertase YidC, N-terminal BEN78_06450 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 BEN78_06455 IPR027368 tRNA modification GTPase MnmE domain 2 BEN78_06455 IPR025867 MnmE, helical domain BEN78_06455 IPR006073 GTP binding domain BEN78_06455 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 BEN78_06455 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_06455 IPR005225 Small GTP-binding protein domain BEN78_06455 IPR018948 GTP-binding protein TrmE, N-terminal BEN78_06455 IPR031168 TrmE-type guanine nucleotide-binding domain BEN78_06455 IPR004520 tRNA modification GTPase MnmE BEN78_06470 IPR017871 ABC transporter, conserved site BEN78_06470 IPR003439 ABC transporter-like BEN78_06470 IPR003593 AAA+ ATPase domain BEN78_06470 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_06480 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BEN78_06480 IPR026281 HTH-type transcriptional regulator RamB BEN78_06480 IPR010359 IrrE N-terminal-like domain BEN78_06480 IPR018653 Domain of unknown function DUF2083,transcriptional regulator BEN78_06480 IPR001387 Cro/C1-type helix-turn-helix domain BEN78_06495 IPR036010 2Fe-2S ferredoxin-like superfamily BEN78_06495 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain BEN78_06495 IPR012675 Beta-grasp domain superfamily BEN78_06495 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain BEN78_06495 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site BEN78_06495 IPR017938 Riboflavin synthase-like beta-barrel BEN78_06495 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BEN78_06495 IPR001433 Oxidoreductase FAD/NAD(P)-binding BEN78_06495 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase BEN78_06495 IPR017927 FAD-binding domain, ferredoxin reductase-type BEN78_06500 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_06500 IPR017871 ABC transporter, conserved site BEN78_06500 IPR003593 AAA+ ATPase domain BEN78_06500 IPR003439 ABC transporter-like BEN78_06505 IPR013525 ABC-2 type transporter BEN78_06505 IPR000412 ABC-2 transporter BEN78_06510 IPR013328 6-phosphogluconate dehydrogenase, domain 2 BEN78_06510 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BEN78_06510 IPR036291 NAD(P)-binding domain superfamily BEN78_06510 IPR003710 Ketopantoate reductase ApbA/PanE BEN78_06510 IPR013752 Ketopantoate reductase, C-terminal domain BEN78_06510 IPR013332 Ketopantoate reductase, N-terminal domain BEN78_06515 IPR011765 Peptidase M16, N-terminal BEN78_06515 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like BEN78_06515 IPR007863 Peptidase M16, C-terminal BEN78_06515 IPR001431 Peptidase M16, zinc-binding site BEN78_06520 IPR006145 Pseudouridine synthase, RsuA/RluA BEN78_06520 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site BEN78_06520 IPR020103 Pseudouridine synthase, catalytic domain superfamily BEN78_06525 IPR000352 Peptide chain release factor class I BEN78_06540 IPR001567 Peptidase M3A/M3B catalytic domain BEN78_06540 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 BEN78_06550 IPR037063 Bacterial Pleckstrin homology domain superfamily BEN78_06550 IPR012544 Bacterial Pleckstrin homology domain BEN78_06565 IPR020904 Short-chain dehydrogenase/reductase, conserved site BEN78_06565 IPR036291 NAD(P)-binding domain superfamily BEN78_06565 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06575 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_06575 IPR036390 Winged helix DNA-binding domain superfamily BEN78_06575 IPR037416 Nodulation protein D, PBP2 BEN78_06575 IPR000847 Transcription regulator HTH, LysR BEN78_06575 IPR005119 LysR, substrate-binding BEN78_06585 IPR018060 DNA binding HTH domain, AraC-type BEN78_06585 IPR018062 HTH domain AraC-type, conserved site BEN78_06615 IPR029058 Alpha/Beta hydrolase fold BEN78_06620 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily BEN78_06620 IPR000644 CBS domain BEN78_06620 IPR006668 Magnesium transporter, MgtE intracellular domain BEN78_06620 IPR038076 MgtE, N-terminal domain superfamily BEN78_06620 IPR006667 SLC41 divalent cation transporters, integral membrane domain BEN78_06620 IPR006669 Magnesium transporter MgtE BEN78_06620 IPR038048 Magnesium transporter MgtE, transmembrane domain BEN78_06645 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_06645 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_06645 IPR012910 TonB-dependent receptor, plug domain BEN78_06645 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_06645 IPR010916 TonB box, conserved site BEN78_06645 IPR010917 TonB-dependent receptor, conserved site BEN78_06645 IPR039426 Vitamin B12 transporter BtuB-like BEN78_06650 IPR020568 Ribosomal protein S5 domain 2-type fold BEN78_06650 IPR037196 HSP90, C-terminal domain BEN78_06650 IPR001404 Heat shock protein Hsp90 family BEN78_06650 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_06650 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_06650 IPR019805 Heat shock protein Hsp90, conserved site BEN78_06650 IPR020575 Heat shock protein Hsp90, N-terminal BEN78_06655 IPR003423 Outer membrane efflux protein BEN78_06655 IPR010131 RND efflux system, outer membrane lipoprotein, NodT BEN78_06660 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06660 IPR020904 Short-chain dehydrogenase/reductase, conserved site BEN78_06660 IPR036291 NAD(P)-binding domain superfamily BEN78_06665 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN78_06665 IPR001036 Acriflavin resistance protein BEN78_06665 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 BEN78_06670 IPR006143 RND efflux pump, membrane fusion protein BEN78_06670 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BEN78_06680 IPR036390 Winged helix DNA-binding domain superfamily BEN78_06680 IPR000847 Transcription regulator HTH, LysR BEN78_06680 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_06680 IPR005119 LysR, substrate-binding BEN78_06685 IPR005119 LysR, substrate-binding BEN78_06685 IPR000847 Transcription regulator HTH, LysR BEN78_06685 IPR036390 Winged helix DNA-binding domain superfamily BEN78_06685 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_06690 IPR006252 Malate synthase A BEN78_06690 IPR001465 Malate synthase BEN78_06690 IPR019830 Malate synthase, conserved site BEN78_06690 IPR011076 Malate synthase-like superfamily BEN78_06695 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site BEN78_06695 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BEN78_06695 IPR040442 Pyruvate kinase-like domain superfamily BEN78_06695 IPR039556 ICL/PEPM domain BEN78_06695 IPR006254 Isocitrate lyase BEN78_06710 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_06710 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_06710 IPR005467 Histidine kinase domain BEN78_06710 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BEN78_06710 IPR013767 PAS fold BEN78_06710 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BEN78_06710 IPR035965 PAS domain superfamily BEN78_06710 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BEN78_06710 IPR000014 PAS domain BEN78_06715 IPR001789 Signal transduction response regulator, receiver domain BEN78_06715 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BEN78_06715 IPR011006 CheY-like superfamily BEN78_06715 IPR009057 Homeobox-like domain superfamily BEN78_06715 IPR025944 Sigma-54 interaction domain, conserved site BEN78_06715 IPR002197 DNA binding HTH domain, Fis-type BEN78_06715 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_06715 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BEN78_06715 IPR003593 AAA+ ATPase domain BEN78_06715 IPR010114 DNA-binding transcriptional regulator NtrC BEN78_06715 IPR002078 RNA polymerase sigma factor 54 interaction domain BEN78_06725 IPR032831 Prokaryotic lipoprotein-attachment site BEN78_06725 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily BEN78_06725 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone BEN78_06725 IPR001424 Superoxide dismutase, copper/zinc binding domain BEN78_06735 IPR012806 Acetyl-CoA C-acyltransferase FadI BEN78_06735 IPR002155 Thiolase BEN78_06735 IPR020616 Thiolase, N-terminal BEN78_06735 IPR020613 Thiolase, conserved site BEN78_06735 IPR020617 Thiolase, C-terminal BEN78_06735 IPR020610 Thiolase, active site BEN78_06735 IPR020615 Thiolase, acyl-enzyme intermediate active site BEN78_06735 IPR016039 Thiolase-like BEN78_06750 IPR039793 Uroporphyrinogen-III synthase BEN78_06750 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase BEN78_06750 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily BEN78_06760 IPR005358 Putative zinc- or iron-chelating domain containing protein BEN78_06765 IPR000639 Epoxide hydrolase-like BEN78_06765 IPR000073 Alpha/beta hydrolase fold-1 BEN78_06765 IPR029058 Alpha/Beta hydrolase fold BEN78_06775 IPR013515 Phytochrome, central region BEN78_06775 IPR003018 GAF domain BEN78_06775 IPR013654 PAS fold-2 BEN78_06775 IPR001294 Phytochrome BEN78_06775 IPR016132 Phytochrome chromophore attachment domain BEN78_06775 IPR005467 Histidine kinase domain BEN78_06775 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_06775 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_06775 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BEN78_06775 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BEN78_06775 IPR035965 PAS domain superfamily BEN78_06775 IPR029016 GAF-like domain superfamily BEN78_06780 IPR016039 Thiolase-like BEN78_06780 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 BEN78_06780 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal BEN78_06780 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BEN78_06790 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like BEN78_06790 IPR011765 Peptidase M16, N-terminal BEN78_06790 IPR001431 Peptidase M16, zinc-binding site BEN78_06790 IPR007863 Peptidase M16, C-terminal BEN78_06795 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06795 IPR020904 Short-chain dehydrogenase/reductase, conserved site BEN78_06795 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase BEN78_06795 IPR036291 NAD(P)-binding domain superfamily BEN78_06800 IPR029028 Alpha/beta knot methyltransferases BEN78_06800 IPR001537 tRNA/rRNA methyltransferase, SpoU type BEN78_06800 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase BEN78_06800 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BEN78_06820 IPR036291 NAD(P)-binding domain superfamily BEN78_06820 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal BEN78_06820 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BEN78_06820 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal BEN78_06820 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent BEN78_06820 IPR013328 6-phosphogluconate dehydrogenase, domain 2 BEN78_06825 IPR003708 Bacterial protein export chaperone SecB BEN78_06825 IPR035958 SecB-like superfamily BEN78_06830 IPR001763 Rhodanese-like domain BEN78_06830 IPR036873 Rhodanese-like domain superfamily BEN78_06840 IPR020845 AMP-binding, conserved site BEN78_06840 IPR000873 AMP-dependent synthetase/ligase BEN78_06840 IPR042099 AMP-dependent synthetase-like superfamily BEN78_06855 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase BEN78_06855 IPR036291 NAD(P)-binding domain superfamily BEN78_06870 IPR004147 UbiB domain BEN78_06870 IPR011009 Protein kinase-like domain superfamily BEN78_06870 IPR010232 Probable protein kinase UbiB BEN78_06875 IPR003829 Pirin, N-terminal domain BEN78_06875 IPR014710 RmlC-like jelly roll fold BEN78_06875 IPR011051 RmlC-like cupin domain superfamily BEN78_06875 IPR008778 Pirin, C-terminal domain BEN78_06875 IPR012093 Pirin BEN78_06880 IPR024918 3'-5' ssDNA/RNA exonuclease TatD BEN78_06880 IPR018228 Deoxyribonuclease, TatD-related, conserved site BEN78_06880 IPR001130 TatD family BEN78_06880 IPR032466 Metal-dependent hydrolase BEN78_06885 IPR007346 Endonuclease I BEN78_06890 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_06890 IPR010225 ATP-dependent helicase HrpB BEN78_06890 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN78_06890 IPR007502 Helicase-associated domain BEN78_06890 IPR011545 DEAD/DEAH box helicase domain BEN78_06890 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal BEN78_06890 IPR001650 Helicase, C-terminal BEN78_06900 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BEN78_06900 IPR002641 Patatin-like phospholipase domain BEN78_06900 IPR001423 Lysophospholipase patatin, conserved site BEN78_06905 IPR012310 DNA ligase, ATP-dependent, central BEN78_06905 IPR016059 DNA ligase, ATP-dependent, conserved site BEN78_06905 IPR029319 DNA ligase, OB-like domain BEN78_06905 IPR012340 Nucleic acid-binding, OB-fold BEN78_06910 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II BEN78_06910 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I BEN78_06910 IPR005841 Alpha-D-phosphohexomutase superfamily BEN78_06910 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III BEN78_06910 IPR016066 Alpha-D-phosphohexomutase, conserved site BEN78_06910 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily BEN78_06910 IPR005843 Alpha-D-phosphohexomutase, C-terminal BEN78_06910 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III BEN78_06915 IPR033704 dUTPase, trimeric BEN78_06915 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase BEN78_06915 IPR036157 dUTPase-like superfamily BEN78_06915 IPR029054 dUTPase-like BEN78_06925 IPR020891 Uncharacterised protein family UPF0758, conserved site BEN78_06925 IPR037518 MPN domain BEN78_06925 IPR025657 RadC-like JAB domain BEN78_06925 IPR010994 RuvA domain 2-like BEN78_06925 IPR001405 Uncharacterised protein family UPF0758 BEN78_06930 IPR004027 SEC-C motif BEN78_06930 IPR023006 Uncharacterised protein family UPF0225 BEN78_06930 IPR032710 NTF2-like domain superfamily BEN78_06935 IPR031304 Transglycosylase SLT domain 2 BEN78_06935 IPR011757 Lytic transglycosylase MltB BEN78_06935 IPR023346 Lysozyme-like domain superfamily BEN78_06970 IPR017871 ABC transporter, conserved site BEN78_06970 IPR003439 ABC transporter-like BEN78_06970 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl BEN78_06970 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_06970 IPR003593 AAA+ ATPase domain BEN78_06975 IPR003453 ABC transport permease subunit MlaE, Proteobacteria BEN78_06975 IPR030802 ABC transporter permease MalE BEN78_06980 IPR003399 Mce/MlaD BEN78_06980 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD BEN78_06995 IPR007428 MlaA lipoprotein BEN78_07000 IPR000889 Glutathione peroxidase BEN78_07000 IPR033674 Thioredoxin/glutathione peroxidase BtuE BEN78_07000 IPR036249 Thioredoxin-like superfamily BEN78_07000 IPR029760 Glutathione peroxidase conserved site BEN78_07000 IPR029759 Glutathione peroxidase active site BEN78_07005 IPR003798 DNA recombination RmuC BEN78_07025 IPR036812 NADP-dependent oxidoreductase domain superfamily BEN78_07025 IPR023210 NADP-dependent oxidoreductase domain BEN78_07030 IPR001123 Amino acid exporter protein, LeuE-type BEN78_07030 IPR004778 Homoserine/Threonine efflux protein BEN78_07035 IPR029058 Alpha/Beta hydrolase fold BEN78_07035 IPR011659 WD40-like Beta Propeller BEN78_07035 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain BEN78_07035 IPR011042 Six-bladed beta-propeller, TolB-like BEN78_07040 IPR033140 Lipase, GDXG, putative serine active site BEN78_07040 IPR002168 Lipase, GDXG, putative histidine active site BEN78_07040 IPR023508 Acetyl esterase BEN78_07040 IPR013094 Alpha/beta hydrolase fold-3 BEN78_07040 IPR029058 Alpha/Beta hydrolase fold BEN78_07050 IPR020556 Amidase, conserved site BEN78_07050 IPR000120 Amidase BEN78_07050 IPR023631 Amidase signature domain BEN78_07050 IPR036928 Amidase signature (AS) superfamily BEN78_07055 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_07055 IPR039426 Vitamin B12 transporter BtuB-like BEN78_07055 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_07055 IPR012910 TonB-dependent receptor, plug domain BEN78_07055 IPR010105 TonB-dependent siderophore receptor BEN78_07060 IPR036390 Winged helix DNA-binding domain superfamily BEN78_07060 IPR011991 ArsR-like helix-turn-helix domain BEN78_07060 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_07060 IPR000485 AsnC-type HTH domain BEN78_07060 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BEN78_07060 IPR019888 Transcription regulator AsnC-type BEN78_07060 IPR011008 Dimeric alpha-beta barrel BEN78_07070 IPR019614 S-adenosylmethionine-dependent methyltransferase BEN78_07070 IPR023542 rRNA large subunit methyltransferase I BEN78_07070 IPR041532 RlmI, PUA-like domain BEN78_07070 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_07070 IPR036974 PUA domain superfamily BEN78_07070 IPR002478 PUA domain BEN78_07070 IPR015947 PUA-like superfamily BEN78_07080 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL BEN78_07080 IPR036249 Thioredoxin-like superfamily BEN78_07080 IPR017937 Thioredoxin, conserved site BEN78_07080 IPR013766 Thioredoxin domain BEN78_07080 IPR001853 DSBA-like thioredoxin domain BEN78_07085 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL BEN78_07085 IPR036249 Thioredoxin-like superfamily BEN78_07085 IPR001853 DSBA-like thioredoxin domain BEN78_07085 IPR013766 Thioredoxin domain BEN78_07085 IPR017937 Thioredoxin, conserved site BEN78_07090 IPR036909 Cytochrome c-like domain superfamily BEN78_07090 IPR009056 Cytochrome c-like domain BEN78_07090 IPR024167 Cytochrome c4-like BEN78_07095 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC BEN78_07095 IPR030393 EngB-type guanine nucleotide-binding (G) domain BEN78_07095 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_07095 IPR006073 GTP binding domain BEN78_07105 IPR028301 Serine proteases, V8 family, histidine active site BEN78_07105 IPR018114 Serine proteases, trypsin family, histidine active site BEN78_07105 IPR000126 Serine proteases, V8 family, serine active site BEN78_07105 IPR001254 Serine proteases, trypsin domain BEN78_07105 IPR008256 Peptidase S1B BEN78_07105 IPR009003 Peptidase S1, PA clan BEN78_07110 IPR017809 Glutamate--cysteine ligase EgtA, Actinobacteria BEN78_07110 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain BEN78_07110 IPR006336 Glutamate--cysteine ligase, GCS2 BEN78_07110 IPR035434 Glutamate--cysteine ligase, bacteria and plant BEN78_07115 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BEN78_07115 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type BEN78_07115 IPR021135 Phosphoenolpyruvate carboxylase BEN78_07115 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site BEN78_07115 IPR033129 Phosphoenolpyruvate carboxylase, His active site BEN78_07120 IPR038390 Metal-sensitive transcriptional repressor superfamily BEN78_07120 IPR003735 Metal-sensitive transcriptional repressor BEN78_07125 IPR013149 Alcohol dehydrogenase, C-terminal BEN78_07125 IPR013154 Alcohol dehydrogenase, N-terminal BEN78_07125 IPR020843 Polyketide synthase, enoylreductase domain BEN78_07125 IPR014183 Alcohol dehydrogenase class III BEN78_07125 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site BEN78_07125 IPR036291 NAD(P)-binding domain superfamily BEN78_07125 IPR011032 GroES-like superfamily BEN78_07135 IPR014186 S-formylglutathione hydrolase BEN78_07135 IPR000801 Putative esterase BEN78_07135 IPR029058 Alpha/Beta hydrolase fold BEN78_07150 IPR007197 Radical SAM BEN78_07150 IPR006638 Elp3/MiaB/NifB BEN78_07150 IPR024177 Biotin synthase BEN78_07150 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB BEN78_07150 IPR010722 Biotin and thiamin synthesis-associated domain BEN78_07150 IPR013785 Aldolase-type TIM barrel BEN78_07155 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_07155 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BEN78_07155 IPR004839 Aminotransferase, class I/classII BEN78_07155 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type BEN78_07155 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria BEN78_07155 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BEN78_07160 IPR032713 Putative multidrug resistance efflux transporter BEN78_07165 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase BEN78_07165 IPR029058 Alpha/Beta hydrolase fold BEN78_07165 IPR000073 Alpha/beta hydrolase fold-1 BEN78_07170 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_07170 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC BEN78_07170 IPR041698 Methyltransferase domain 25 BEN78_07175 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_07175 IPR020904 Short-chain dehydrogenase/reductase, conserved site BEN78_07175 IPR036291 NAD(P)-binding domain superfamily BEN78_07180 IPR018060 DNA binding HTH domain, AraC-type BEN78_07180 IPR018062 HTH domain AraC-type, conserved site BEN78_07180 IPR032783 AraC-type transcription regulator, ligand-binding domain BEN78_07180 IPR009057 Homeobox-like domain superfamily BEN78_07200 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BEN78_07200 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site BEN78_07200 IPR001926 Pyridoxal-phosphate dependent enzyme BEN78_07210 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related BEN78_07210 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_07210 IPR026904 GidA associated domain 3 BEN78_07210 IPR020595 MnmG-related, conserved site BEN78_07210 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG BEN78_07240 IPR035906 MetI-like superfamily BEN78_07240 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BEN78_07245 IPR003439 ABC transporter-like BEN78_07245 IPR017871 ABC transporter, conserved site BEN78_07245 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_07245 IPR003593 AAA+ ATPase domain BEN78_07255 IPR000160 GGDEF domain BEN78_07255 IPR001789 Signal transduction response regulator, receiver domain BEN78_07255 IPR011006 CheY-like superfamily BEN78_07255 IPR029787 Nucleotide cyclase BEN78_07260 IPR006145 Pseudouridine synthase, RsuA/RluA BEN78_07260 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site BEN78_07260 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain BEN78_07260 IPR020103 Pseudouridine synthase, catalytic domain superfamily BEN78_07260 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F BEN78_07280 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric BEN78_07295 IPR015942 Asp/Glu/hydantoin racemase BEN78_07295 IPR001920 Asp/Glu racemase BEN78_07295 IPR018187 Asp/Glu racemase, active site 1 BEN78_07295 IPR033134 Asp/Glu racemase, active site 2 BEN78_07295 IPR004380 Aspartate racemase BEN78_07305 IPR019808 Histidine triad, conserved site BEN78_07305 IPR039384 HINT family BEN78_07305 IPR001310 Histidine triad (HIT) protein BEN78_07305 IPR011146 HIT-like domain BEN78_07305 IPR036265 HIT-like superfamily BEN78_07320 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 BEN78_07320 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF BEN78_07320 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal BEN78_07330 IPR011650 Peptidase M20, dimerisation domain BEN78_07330 IPR002933 Peptidase M20 BEN78_07330 IPR036264 Bacterial exopeptidase dimerisation domain BEN78_07330 IPR017439 Amidohydrolase BEN78_07335 IPR011650 Peptidase M20, dimerisation domain BEN78_07335 IPR017439 Amidohydrolase BEN78_07335 IPR002933 Peptidase M20 BEN78_07335 IPR036264 Bacterial exopeptidase dimerisation domain BEN78_07340 IPR005000 HpcH/HpaI aldolase/citrate lyase domain BEN78_07340 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BEN78_07340 IPR040442 Pyruvate kinase-like domain superfamily BEN78_07340 IPR011206 Citrate lyase beta subunit-like BEN78_07345 IPR038377 Sodium/glucose symporter superfamily BEN78_07345 IPR001734 Sodium/solute symporter BEN78_07350 IPR000847 Transcription regulator HTH, LysR BEN78_07350 IPR005119 LysR, substrate-binding BEN78_07350 IPR036390 Winged helix DNA-binding domain superfamily BEN78_07350 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_07355 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_07355 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_07355 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_07355 IPR010105 TonB-dependent siderophore receptor BEN78_07355 IPR010917 TonB-dependent receptor, conserved site BEN78_07355 IPR039426 Vitamin B12 transporter BtuB-like BEN78_07355 IPR012910 TonB-dependent receptor, plug domain BEN78_07360 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site BEN78_07360 IPR029056 Ribokinase-like BEN78_07360 IPR011877 Ribokinase BEN78_07360 IPR011611 Carbohydrate kinase PfkB BEN78_07360 IPR002139 Ribokinase/fructokinase BEN78_07365 IPR005532 Sulfatase-modifying factor enzyme BEN78_07365 IPR042095 Sulfatase-modifying factor enzyme superfamily BEN78_07365 IPR016187 C-type lectin fold BEN78_07375 IPR003673 CoA-transferase family III BEN78_07375 IPR023606 CoA-transferase family III domain superfamily BEN78_07380 IPR018225 Transaldolase, active site BEN78_07380 IPR004730 Transaldolase type 1 BEN78_07380 IPR001585 Transaldolase/Fructose-6-phosphate aldolase BEN78_07380 IPR013785 Aldolase-type TIM barrel BEN78_07385 IPR001011 Acid phosphatase, class A, bacterial BEN78_07385 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BEN78_07385 IPR018296 Acid phosphatase, class A, bacterial, conserved site BEN78_07385 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily BEN78_07400 IPR000847 Transcription regulator HTH, LysR BEN78_07400 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_07400 IPR036390 Winged helix DNA-binding domain superfamily BEN78_07400 IPR005119 LysR, substrate-binding BEN78_07405 IPR003680 Flavodoxin-like fold BEN78_07405 IPR023048 NADH-azoreductase, FMN-dependent BEN78_07405 IPR029039 Flavoprotein-like superfamily BEN78_07410 IPR006276 Cobalamin-independent methionine synthase BEN78_07410 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal BEN78_07410 IPR038071 UROD/MetE-like superfamily BEN78_07410 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal BEN78_07415 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component BEN78_07415 IPR006860 FecR protein BEN78_07415 IPR032623 FecR, N-terminal BEN78_07420 IPR039425 RNA polymerase sigma-70 like BEN78_07420 IPR014284 RNA polymerase sigma-70 like domain BEN78_07420 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_07420 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN78_07420 IPR013325 RNA polymerase sigma factor, region 2 BEN78_07420 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site BEN78_07420 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 BEN78_07420 IPR007627 RNA polymerase sigma-70 region 2 BEN78_07440 IPR015500 Peptidase S8, subtilisin-related BEN78_07440 IPR008979 Galactose-binding-like domain superfamily BEN78_07440 IPR023827 Peptidase S8, subtilisin, Asp-active site BEN78_07440 IPR000209 Peptidase S8/S53 domain BEN78_07440 IPR023828 Peptidase S8, subtilisin, Ser-active site BEN78_07440 IPR036852 Peptidase S8/S53 domain superfamily BEN78_07440 IPR002884 P domain BEN78_07445 IPR018653 Domain of unknown function DUF2083,transcriptional regulator BEN78_07445 IPR001387 Cro/C1-type helix-turn-helix domain BEN78_07445 IPR010359 IrrE N-terminal-like domain BEN78_07445 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BEN78_07445 IPR026281 HTH-type transcriptional regulator RamB BEN78_07450 IPR026281 HTH-type transcriptional regulator RamB BEN78_07450 IPR010359 IrrE N-terminal-like domain BEN78_07450 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BEN78_07450 IPR001387 Cro/C1-type helix-turn-helix domain BEN78_07450 IPR018653 Domain of unknown function DUF2083,transcriptional regulator BEN78_07455 IPR016161 Aldehyde/histidinol dehydrogenase BEN78_07455 IPR010061 Methylmalonate-semialdehyde dehydrogenase BEN78_07455 IPR016163 Aldehyde dehydrogenase, C-terminal BEN78_07455 IPR016160 Aldehyde dehydrogenase, cysteine active site BEN78_07455 IPR016162 Aldehyde dehydrogenase, N-terminal BEN78_07455 IPR015590 Aldehyde dehydrogenase domain BEN78_07460 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain BEN78_07460 IPR006089 Acyl-CoA dehydrogenase, conserved site BEN78_07460 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily BEN78_07460 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal BEN78_07460 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily BEN78_07460 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal BEN78_07460 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal BEN78_07465 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site BEN78_07465 IPR029045 ClpP/crotonase-like domain superfamily BEN78_07465 IPR001753 Enoyl-CoA hydratase/isomerase BEN78_07465 IPR014748 Enoyl-CoA hydratase, C-terminal BEN78_07470 IPR029045 ClpP/crotonase-like domain superfamily BEN78_07470 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site BEN78_07470 IPR014748 Enoyl-CoA hydratase, C-terminal BEN78_07470 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB BEN78_07470 IPR001753 Enoyl-CoA hydratase/isomerase BEN78_07475 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain BEN78_07475 IPR036291 NAD(P)-binding domain superfamily BEN78_07475 IPR015815 3-hydroxyisobutyrate dehydrogenase-related BEN78_07475 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding BEN78_07475 IPR013328 6-phosphogluconate dehydrogenase, domain 2 BEN78_07475 IPR011548 3-hydroxyisobutyrate dehydrogenase BEN78_07475 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BEN78_07475 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site BEN78_07485 IPR036034 PDZ superfamily BEN78_07485 IPR028204 Tricorn protease C1 domain BEN78_07485 IPR015943 WD40/YVTN repeat-like-containing domain superfamily BEN78_07485 IPR012393 Tricorn protease BEN78_07485 IPR029414 Tricorn protease, PDZ domain BEN78_07485 IPR011659 WD40-like Beta Propeller BEN78_07485 IPR005151 Tail specific protease BEN78_07485 IPR029045 ClpP/crotonase-like domain superfamily BEN78_07490 IPR000101 Gamma-glutamyltranspeptidase BEN78_07490 IPR029055 Nucleophile aminohydrolases, N-terminal BEN78_07525 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_07525 IPR009744 VirC1 BEN78_07540 IPR030871 Cardiolipin synthase C BEN78_07540 IPR025202 Phospholipase D-like domain BEN78_07540 IPR001736 Phospholipase D/Transphosphatidylase BEN78_07545 IPR003736 Phenylacetic acid degradation-related domain BEN78_07545 IPR006683 Thioesterase domain BEN78_07545 IPR029069 HotDog domain superfamily BEN78_07565 IPR008914 Phosphatidylethanolamine-binding protein BEN78_07565 IPR005247 YbhB/YbcL BEN78_07565 IPR036610 PEBP-like superfamily BEN78_07575 IPR003824 Undecaprenyl-diphosphatase UppP BEN78_07585 IPR023031 Orotate phosphoribosyltransferase BEN78_07585 IPR000836 Phosphoribosyltransferase domain BEN78_07585 IPR004467 Orotate phosphoribosyl transferase domain BEN78_07585 IPR029057 Phosphoribosyltransferase-like BEN78_07590 IPR036909 Cytochrome c-like domain superfamily BEN78_07590 IPR004852 Di-haem cytochrome c peroxidase BEN78_07590 IPR009056 Cytochrome c-like domain BEN78_07590 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase BEN78_07595 IPR020848 AP endonuclease 1, conserved site BEN78_07595 IPR005135 Endonuclease/exonuclease/phosphatase BEN78_07595 IPR004808 AP endonuclease 1 BEN78_07595 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BEN78_07595 IPR020847 AP endonuclease 1, binding site BEN78_07600 IPR020846 Major facilitator superfamily domain BEN78_07600 IPR011701 Major facilitator superfamily BEN78_07600 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 BEN78_07600 IPR036259 MFS transporter superfamily BEN78_07615 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily BEN78_07615 IPR013264 DNA primase, catalytic core, N-terminal BEN78_07615 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal BEN78_07615 IPR006295 DNA primase, DnaG BEN78_07615 IPR019475 DNA primase, DnaB-helicase binding domain BEN78_07615 IPR036977 DNA Primase, CHC2-type zinc finger BEN78_07615 IPR013173 DNA primase DnaG, DnaB-binding domain BEN78_07615 IPR034151 Bacterial DnaG primase, TOPRIM domain BEN78_07615 IPR006171 TOPRIM domain BEN78_07615 IPR002694 Zinc finger, CHC2-type BEN78_07615 IPR030846 DNA primase DnaG, bacteria BEN78_07630 IPR023679 Uncharacterised protein family UPF0761, bacterial BEN78_07630 IPR017039 Virulence factor BrkB BEN78_07635 IPR001650 Helicase, C-terminal BEN78_07635 IPR006555 ATP-dependent helicase, C-terminal BEN78_07635 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_07635 IPR010614 DEAD2 BEN78_07635 IPR039000 ATP-dependent DNA helicase DinG BEN78_07635 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type BEN78_07650 IPR036291 NAD(P)-binding domain superfamily BEN78_07650 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_07650 IPR020904 Short-chain dehydrogenase/reductase, conserved site BEN78_07660 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type BEN78_07660 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B BEN78_07670 IPR011006 CheY-like superfamily BEN78_07670 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_07670 IPR001789 Signal transduction response regulator, receiver domain BEN78_07670 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_07670 IPR005467 Histidine kinase domain BEN78_07670 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BEN78_07670 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BEN78_07670 IPR000014 PAS domain BEN78_07670 IPR035965 PAS domain superfamily BEN78_07670 IPR013656 PAS fold-4 BEN78_07670 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BEN78_07685 IPR029039 Flavoprotein-like superfamily BEN78_07685 IPR001046 NRAMP family BEN78_07685 IPR005025 NADPH-dependent FMN reductase-like BEN78_07690 IPR011701 Major facilitator superfamily BEN78_07690 IPR036259 MFS transporter superfamily BEN78_07690 IPR020846 Major facilitator superfamily domain BEN78_07720 IPR023210 NADP-dependent oxidoreductase domain BEN78_07720 IPR036812 NADP-dependent oxidoreductase domain superfamily BEN78_07720 IPR018170 Aldo/keto reductase, conserved site BEN78_07720 IPR020471 Aldo/keto reductase BEN78_07745 IPR013655 PAS fold-3 BEN78_07745 IPR035965 PAS domain superfamily BEN78_07745 IPR000700 PAS-associated, C-terminal BEN78_07745 IPR000014 PAS domain BEN78_07745 IPR001610 PAC motif BEN78_07745 IPR029787 Nucleotide cyclase BEN78_07745 IPR007895 MASE1 BEN78_07745 IPR000160 GGDEF domain BEN78_07745 IPR035919 EAL domain superfamily BEN78_07745 IPR001633 EAL domain BEN78_07745 IPR013656 PAS fold-4 BEN78_07760 IPR014241 Cytochrome c oxidase, subunit I bacterial type BEN78_07760 IPR023616 Cytochrome c oxidase-like, subunit I domain BEN78_07760 IPR036927 Cytochrome c oxidase-like, subunit I superfamily BEN78_07760 IPR000883 Cytochrome c oxidase subunit I BEN78_07760 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site BEN78_07775 IPR005273 Uracil-DNA glycosylase family 4 BEN78_07775 IPR005122 Uracil-DNA glycosylase-like BEN78_07775 IPR036895 Uracil-DNA glycosylase-like domain superfamily BEN78_07785 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BEN78_07785 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_07785 IPR036390 Winged helix DNA-binding domain superfamily BEN78_07785 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_07785 IPR004839 Aminotransferase, class I/classII BEN78_07785 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BEN78_07785 IPR000524 Transcription regulator HTH, GntR BEN78_07810 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 BEN78_07810 IPR001567 Peptidase M3A/M3B catalytic domain BEN78_07815 IPR038770 Sodium/solute symporter superfamily BEN78_07815 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria BEN78_07815 IPR018422 Cation/H+ exchanger, CPA1 family BEN78_07815 IPR006153 Cation/H+ exchanger BEN78_07820 IPR005358 Putative zinc- or iron-chelating domain containing protein BEN78_07830 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase BEN78_07830 IPR022893 Shikimate dehydrogenase family BEN78_07830 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal BEN78_07830 IPR011342 Shikimate dehydrogenase BEN78_07830 IPR041121 SDH, C-terminal BEN78_07830 IPR036291 NAD(P)-binding domain superfamily BEN78_07835 IPR023828 Peptidase S8, subtilisin, Ser-active site BEN78_07835 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily BEN78_07835 IPR015500 Peptidase S8, subtilisin-related BEN78_07835 IPR034213 Vpr-like peptidase, catalytic domain BEN78_07835 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 BEN78_07835 IPR022398 Peptidase S8, subtilisin, His-active site BEN78_07835 IPR023827 Peptidase S8, subtilisin, Asp-active site BEN78_07835 IPR036852 Peptidase S8/S53 domain superfamily BEN78_07835 IPR000209 Peptidase S8/S53 domain BEN78_07835 IPR003137 PA domain BEN78_07835 IPR025965 FlgD Ig-like domain BEN78_07840 IPR013785 Aldolase-type TIM barrel BEN78_07840 IPR030656 Delta-aminolevulinic acid dehydratase, active site BEN78_07840 IPR001731 Delta-aminolevulinic acid dehydratase BEN78_07845 IPR031038 Chorismatase, FkbO/Hyg5 family BEN78_07845 IPR035959 RutC-like superfamily BEN78_07850 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_07850 IPR006905 Flavin-dependent halogenase BEN78_07870 IPR029069 HotDog domain superfamily BEN78_07870 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ BEN78_07870 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ BEN78_07895 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative BEN78_07895 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_07895 IPR036291 NAD(P)-binding domain superfamily BEN78_07910 IPR012941 Phenol hydroxylase, C-terminal dimerisation domain BEN78_07910 IPR038220 Phenol hydroxylase, C-terminal TRX-fold domain superfamily BEN78_07910 IPR036249 Thioredoxin-like superfamily BEN78_07910 IPR002938 FAD-binding domain BEN78_07910 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_07915 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_07915 IPR001173 Glycosyltransferase 2-like BEN78_07915 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase BEN78_07925 IPR000794 Beta-ketoacyl synthase BEN78_07925 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BEN78_07925 IPR016039 Thiolase-like BEN78_07925 IPR014030 Beta-ketoacyl synthase, N-terminal BEN78_07925 IPR018201 Beta-ketoacyl synthase, active site BEN78_07925 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 BEN78_07925 IPR014031 Beta-ketoacyl synthase, C-terminal BEN78_07945 IPR029058 Alpha/Beta hydrolase fold BEN78_07945 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily BEN78_07945 IPR002469 Dipeptidylpeptidase IV, N-terminal domain BEN78_07945 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain BEN78_07965 IPR017853 Glycoside hydrolase superfamily BEN78_07965 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily BEN78_07965 IPR001764 Glycoside hydrolase, family 3, N-terminal BEN78_07965 IPR013783 Immunoglobulin-like fold BEN78_07965 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily BEN78_07965 IPR002772 Glycoside hydrolase family 3 C-terminal domain BEN78_07965 IPR026891 Fibronectin type III-like domain BEN78_07970 IPR028082 Periplasmic binding protein-like I BEN78_07970 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BEN78_07970 IPR000843 LacI-type HTH domain BEN78_07970 IPR006377 Catabolite control protein A BEN78_07990 IPR005982 Thioredoxin reductase BEN78_07990 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_07990 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site BEN78_07990 IPR023753 FAD/NAD(P)-binding domain BEN78_07995 IPR010105 TonB-dependent siderophore receptor BEN78_07995 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_07995 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_07995 IPR012910 TonB-dependent receptor, plug domain BEN78_07995 IPR039426 Vitamin B12 transporter BtuB-like BEN78_08005 IPR002139 Ribokinase/fructokinase BEN78_08005 IPR011611 Carbohydrate kinase PfkB BEN78_08005 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site BEN78_08005 IPR029056 Ribokinase-like BEN78_08010 IPR005964 Bacterial glucose/galactose transporter BEN78_08010 IPR011701 Major facilitator superfamily BEN78_08010 IPR036259 MFS transporter superfamily BEN78_08020 IPR041371 Glycosyl hydrolase family 92 N-terminal domain BEN78_08020 IPR014718 Glycoside hydrolase-type carbohydrate-binding BEN78_08020 IPR005887 Alpha-1,2-mannosidase, putative BEN78_08020 IPR008928 Six-hairpin glycosidase superfamily BEN78_08020 IPR012939 Glycosyl hydrolase family 92 BEN78_08025 IPR005134 Uncharacterised protein family UPF0114 BEN78_08025 IPR020761 Uncharacterised protein family UPF0114, bacteria BEN78_08030 IPR013986 DExx box DNA helicase domain superfamily BEN78_08030 IPR000212 DNA helicase, UvrD/REP type BEN78_08030 IPR034739 UvrD/AddA helicase, N-terminal BEN78_08030 IPR014016 UvrD-like helicase, ATP-binding domain BEN78_08030 IPR005753 DNA helicase, ATP-dependent, UvrD type BEN78_08030 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_08030 IPR014017 UvrD-like DNA helicase, C-terminal BEN78_08035 IPR006015 Universal stress protein A family BEN78_08035 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_08035 IPR006016 UspA BEN78_08045 IPR019500 Peptidase S46 BEN78_08045 IPR009003 Peptidase S1, PA clan BEN78_08050 IPR000683 Oxidoreductase, N-terminal BEN78_08050 IPR036291 NAD(P)-binding domain superfamily BEN78_08050 IPR004104 Oxidoreductase, C-terminal BEN78_08070 IPR002421 5'-3' exonuclease, N-terminal BEN78_08070 IPR036279 5'-3' exonuclease, C-terminal domain superfamily BEN78_08070 IPR019760 DNA-directed DNA polymerase, family A, conserved site BEN78_08070 IPR002562 3'-5' exonuclease domain BEN78_08070 IPR012337 Ribonuclease H-like superfamily BEN78_08070 IPR020045 DNA polymerase I-like, H3TH domain BEN78_08070 IPR018320 DNA polymerase 1 BEN78_08070 IPR002298 DNA polymerase A BEN78_08070 IPR008918 Helix-hairpin-helix motif, class 2 BEN78_08070 IPR036397 Ribonuclease H superfamily BEN78_08070 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal BEN78_08070 IPR001098 DNA-directed DNA polymerase, family A, palm domain BEN78_08070 IPR029060 PIN-like domain superfamily BEN78_08075 IPR020103 Pseudouridine synthase, catalytic domain superfamily BEN78_08075 IPR006225 Pseudouridine synthase, RluC/RluD BEN78_08075 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site BEN78_08075 IPR006145 Pseudouridine synthase, RsuA/RluA BEN78_08080 IPR018375 Coproporphyrinogen III oxidase, conserved site BEN78_08080 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily BEN78_08080 IPR001260 Coproporphyrinogen III oxidase, aerobic BEN78_08090 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain BEN78_08090 IPR011659 WD40-like Beta Propeller BEN78_08090 IPR029058 Alpha/Beta hydrolase fold BEN78_08090 IPR011042 Six-bladed beta-propeller, TolB-like BEN78_08095 IPR002585 Cytochrome ubiquinol oxidase subunit 1 BEN78_08100 IPR003317 Cytochrome ubiquinol oxidase subunit 2 BEN78_08105 IPR038068 YcgL-like superfamily BEN78_08105 IPR027354 YcgL domain BEN78_08120 IPR024467 Domain of unknown function DUF2384 BEN78_08140 IPR022924 Cardiolipin synthase BEN78_08140 IPR027379 Cardiolipin synthase N-terminal BEN78_08140 IPR025202 Phospholipase D-like domain BEN78_08140 IPR001736 Phospholipase D/Transphosphatidylase BEN78_08140 IPR030840 Cardiolipin synthase A BEN78_08145 IPR038584 Ribosomal protein L33 superfamily BEN78_08145 IPR011332 Zinc-binding ribosomal protein BEN78_08145 IPR018264 Ribosomal protein L33, conserved site BEN78_08145 IPR001705 Ribosomal protein L33 BEN78_08150 IPR037147 Ribosomal protein L28/L24 superfamily BEN78_08150 IPR026569 Ribosomal protein L28/L24 BEN78_08150 IPR001383 Ribosomal protein L28 BEN78_08150 IPR034704 L28p-like BEN78_08160 IPR006665 OmpA-like domain BEN78_08160 IPR025713 Motility protein B, N-terminal domain BEN78_08160 IPR036737 OmpA-like domain superfamily BEN78_08180 IPR027444 Histone-like protein H-NS, C-terminal domain BEN78_08180 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily BEN78_08180 IPR001801 Histone-like protein H-NS BEN78_08190 IPR023298 P-type ATPase, transmembrane domain superfamily BEN78_08190 IPR004623 Potassium-transporting ATPase A chain BEN78_08195 IPR001757 P-type ATPase BEN78_08195 IPR006391 P-type ATPase, B chain, subfamily IA BEN78_08195 IPR036412 HAD-like superfamily BEN78_08195 IPR008250 P-type ATPase, A domain superfamily BEN78_08195 IPR023298 P-type ATPase, transmembrane domain superfamily BEN78_08195 IPR018303 P-type ATPase, phosphorylation site BEN78_08195 IPR023299 P-type ATPase, cytoplasmic domain N BEN78_08200 IPR003820 Potassium-transporting ATPase C chain BEN78_08205 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal BEN78_08205 IPR038318 KdpD, transmembrane domain superfamily BEN78_08205 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BEN78_08205 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_08205 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_08205 IPR005467 Histidine kinase domain BEN78_08205 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BEN78_08205 IPR025201 Sensor protein KdpD, transmembrane domain BEN78_08205 IPR029016 GAF-like domain superfamily BEN78_08205 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BEN78_08205 IPR003018 GAF domain BEN78_08210 IPR001789 Signal transduction response regulator, receiver domain BEN78_08210 IPR001867 OmpR/PhoB-type DNA-binding domain BEN78_08210 IPR039420 Transcriptional regulatory protein WalR-like BEN78_08210 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_08210 IPR011006 CheY-like superfamily BEN78_08215 IPR013154 Alcohol dehydrogenase, N-terminal BEN78_08215 IPR036291 NAD(P)-binding domain superfamily BEN78_08215 IPR001227 Acyl transferase domain superfamily BEN78_08215 IPR013149 Alcohol dehydrogenase, C-terminal BEN78_08215 IPR032821 Ketoacyl-synthetase, C-terminal extension BEN78_08215 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding BEN78_08215 IPR014030 Beta-ketoacyl synthase, N-terminal BEN78_08215 IPR014031 Beta-ketoacyl synthase, C-terminal BEN78_08215 IPR018201 Beta-ketoacyl synthase, active site BEN78_08215 IPR011032 GroES-like superfamily BEN78_08215 IPR042104 Polyketide synthase, dehydratase domain superfamily BEN78_08215 IPR009081 Phosphopantetheine binding ACP domain BEN78_08215 IPR036736 ACP-like superfamily BEN78_08215 IPR020806 Polyketide synthase, phosphopantetheine-binding domain BEN78_08215 IPR013968 Polyketide synthase, ketoreductase domain BEN78_08215 IPR014043 Acyl transferase BEN78_08215 IPR016039 Thiolase-like BEN78_08215 IPR020843 Polyketide synthase, enoylreductase domain BEN78_08215 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BEN78_08215 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BEN78_08215 IPR020807 Polyketide synthase, dehydratase domain BEN78_08225 IPR016032 Signal transduction response regulator, C-terminal effector BEN78_08225 IPR001789 Signal transduction response regulator, receiver domain BEN78_08225 IPR000792 Transcription regulator LuxR, C-terminal BEN78_08225 IPR011006 CheY-like superfamily BEN78_08270 IPR020846 Major facilitator superfamily domain BEN78_08270 IPR011701 Major facilitator superfamily BEN78_08270 IPR036259 MFS transporter superfamily BEN78_08275 IPR019691 Protein of unknown function DUF2585 BEN78_08280 IPR006694 Fatty acid hydroxylase BEN78_08285 IPR019845 Squalene/phytoene synthase, conserved site BEN78_08285 IPR002060 Squalene/phytoene synthase BEN78_08285 IPR008949 Isoprenoid synthase domain superfamily BEN78_08285 IPR033904 Trans-Isoprenyl Diphosphate Synthases, head-to-head BEN78_08300 IPR035595 UDP-glycosyltransferase family, conserved site BEN78_08300 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase BEN78_08300 IPR006326 UDP-glycosyltransferase, MGT BEN78_08305 IPR013785 Aldolase-type TIM barrel BEN78_08305 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent BEN78_08305 IPR000262 FMN-dependent dehydrogenase BEN78_08320 IPR000415 Nitroreductase-like BEN78_08320 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE BEN78_08320 IPR029479 Nitroreductase BEN78_08325 IPR007372 Lipid/polyisoprenoid-binding, YceI-like BEN78_08325 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily BEN78_08325 IPR023480 Uncharacterised protein family UPF0312/YceI BEN78_08330 IPR012093 Pirin BEN78_08330 IPR003829 Pirin, N-terminal domain BEN78_08330 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain BEN78_08330 IPR014710 RmlC-like jelly roll fold BEN78_08330 IPR011051 RmlC-like cupin domain superfamily BEN78_08340 IPR017814 Mycothiol biosynthesis protein, MshA BEN78_08340 IPR001296 Glycosyl transferase, family 1 BEN78_08340 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain BEN78_08350 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase BEN78_08350 IPR004960 Bacterial lipid A biosynthesis acyltransferase BEN78_08355 IPR039901 3-deoxy-D-manno-octulosonic acid transferase BEN78_08355 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily BEN78_08355 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal BEN78_08360 IPR010130 Type I secretion outer membrane protein, TolC BEN78_08360 IPR003423 Outer membrane efflux protein BEN78_08365 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase BEN78_08365 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_08370 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BEN78_08370 IPR001647 DNA-binding HTH domain, TetR-type BEN78_08370 IPR009057 Homeobox-like domain superfamily BEN78_08370 IPR041347 MftR, C-terminal BEN78_08380 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN78_08380 IPR001036 Acriflavin resistance protein BEN78_08420 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_08420 IPR000014 PAS domain BEN78_08420 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_08420 IPR005467 Histidine kinase domain BEN78_08420 IPR011006 CheY-like superfamily BEN78_08420 IPR001789 Signal transduction response regulator, receiver domain BEN78_08420 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BEN78_08420 IPR013656 PAS fold-4 BEN78_08420 IPR035965 PAS domain superfamily BEN78_08420 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BEN78_08420 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BEN78_08430 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_08430 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_08430 IPR010105 TonB-dependent siderophore receptor BEN78_08430 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_08430 IPR012910 TonB-dependent receptor, plug domain BEN78_08430 IPR039426 Vitamin B12 transporter BtuB-like BEN78_08460 IPR042096 Dihydroxy-acid dehydratase, C-terminal BEN78_08460 IPR004404 Dihydroxy-acid dehydratase BEN78_08460 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase BEN78_08460 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site BEN78_08460 IPR037237 IlvD/EDD, N-terminal domain BEN78_08465 IPR036291 NAD(P)-binding domain superfamily BEN78_08465 IPR033922 NAD(P) binding domain of glutamate dehydrogenase BEN78_08465 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase BEN78_08465 IPR014362 Glutamate dehydrogenase BEN78_08465 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain BEN78_08465 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal BEN78_08465 IPR033524 Leu/Phe/Val dehydrogenases active site BEN78_08470 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site BEN78_08470 IPR024084 Isopropylmalate dehydrogenase-like domain BEN78_08470 IPR004429 Isopropylmalate dehydrogenase BEN78_08475 IPR033940 3-isopropylmalate dehydratase, swivel domain BEN78_08475 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain BEN78_08475 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel BEN78_08475 IPR004431 3-isopropylmalate dehydratase, small subunit BEN78_08480 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain BEN78_08480 IPR018136 Aconitase family, 4Fe-4S cluster binding site BEN78_08480 IPR036008 Aconitase, iron-sulfur domain BEN78_08480 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 BEN78_08480 IPR004430 3-isopropylmalate dehydratase, large subunit BEN78_08480 IPR033941 3-Isopropylmalate dehydratase, catalytic domain BEN78_08485 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site BEN78_08485 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily BEN78_08485 IPR000891 Pyruvate carboxyltransferase BEN78_08485 IPR005671 2-isopropylmalate synthase, bacterial-type BEN78_08485 IPR013785 Aldolase-type TIM barrel BEN78_08485 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain BEN78_08495 IPR033939 Branched-chain aminotransferase BEN78_08495 IPR036038 Aminotransferase-like, PLP-dependent enzymes BEN78_08495 IPR018300 Aminotransferase, class IV, conserved site BEN78_08495 IPR005785 Branched-chain amino acid aminotransferase I BEN78_08495 IPR001544 Aminotransferase class IV BEN78_08505 IPR039368 Acetolactate synthase large subunit, TPP binding domain BEN78_08505 IPR012846 Acetolactate synthase, large subunit, biosynthetic BEN78_08505 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding BEN78_08505 IPR000399 TPP-binding enzyme, conserved site BEN78_08505 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain BEN78_08505 IPR029035 DHS-like NAD/FAD-binding domain superfamily BEN78_08505 IPR029061 Thiamin diphosphate-binding fold BEN78_08505 IPR012000 Thiamine pyrophosphate enzyme, central domain BEN78_08510 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BEN78_08510 IPR013023 Ketol-acid reductoisomerase BEN78_08510 IPR013116 Ketol-acid reductoisomerase, N-terminal BEN78_08510 IPR014359 Ketol-acid reductoisomerase, prokaryotic BEN78_08510 IPR036291 NAD(P)-binding domain superfamily BEN78_08510 IPR000506 Ketol-acid reductoisomerase, C-terminal BEN78_08520 IPR014004 Transport-associated and nodulation domain, bacteria BEN78_08520 IPR007055 BON domain BEN78_08525 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BEN78_08525 IPR004450 Threonine synthase-like BEN78_08525 IPR037158 Threonine synthase, N-terminal domain superfamily BEN78_08525 IPR029144 Threonine synthase, N-terminal BEN78_08525 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site BEN78_08525 IPR001926 Pyridoxal-phosphate dependent enzyme BEN78_08530 IPR000870 Homoserine kinase BEN78_08530 IPR020568 Ribosomal protein S5 domain 2-type fold BEN78_08530 IPR006204 GHMP kinase N-terminal domain BEN78_08530 IPR013750 GHMP kinase, C-terminal domain BEN78_08530 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BEN78_08530 IPR036554 GHMP kinase, C-terminal domain superfamily BEN78_08535 IPR002912 ACT domain BEN78_08535 IPR036393 Acetylglutamate kinase-like superfamily BEN78_08535 IPR018042 Aspartate kinase, conserved site BEN78_08535 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding BEN78_08535 IPR001048 Aspartate/glutamate/uridylate kinase BEN78_08535 IPR001341 Aspartate kinase BEN78_08535 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain BEN78_08535 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I BEN78_08535 IPR027795 CASTOR, ACT domain BEN78_08535 IPR001342 Homoserine dehydrogenase, catalytic BEN78_08535 IPR036291 NAD(P)-binding domain superfamily BEN78_08535 IPR019811 Homoserine dehydrogenase, conserved site BEN78_08540 IPR038521 ThiC/Bza superfamily BEN78_08540 IPR037509 Phosphomethylpyrimidine synthase BEN78_08540 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B BEN78_08540 IPR025747 ThiC-associated domain BEN78_08550 IPR007195 TolB, N-terminal BEN78_08550 IPR011659 WD40-like Beta Propeller BEN78_08550 IPR014167 Tol-Pal system protein TolB BEN78_08550 IPR011042 Six-bladed beta-propeller, TolB-like BEN78_08550 IPR036752 TolB, N-terminal domain superfamily BEN78_08570 IPR008162 Inorganic pyrophosphatase BEN78_08570 IPR036649 Inorganic pyrophosphatase superfamily BEN78_08585 IPR004131 Pyrophosphate-energised proton pump BEN78_08590 IPR017871 ABC transporter, conserved site BEN78_08590 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_08590 IPR003439 ABC transporter-like BEN78_08590 IPR003593 AAA+ ATPase domain BEN78_08605 IPR004736 MFS transporter, metabolite:H symporter BEN78_08605 IPR020846 Major facilitator superfamily domain BEN78_08605 IPR005829 Sugar transporter, conserved site BEN78_08605 IPR036259 MFS transporter superfamily BEN78_08605 IPR005828 Major facilitator, sugar transporter-like BEN78_08615 IPR011904 Acetate-CoA ligase BEN78_08615 IPR042099 AMP-dependent synthetase-like superfamily BEN78_08615 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain BEN78_08615 IPR020845 AMP-binding, conserved site BEN78_08615 IPR000873 AMP-dependent synthetase/ligase BEN78_08615 IPR025110 AMP-binding enzyme, C-terminal domain BEN78_08620 IPR000792 Transcription regulator LuxR, C-terminal BEN78_08620 IPR001789 Signal transduction response regulator, receiver domain BEN78_08620 IPR016032 Signal transduction response regulator, C-terminal effector BEN78_08620 IPR011006 CheY-like superfamily BEN78_08625 IPR023512 Deaminase MtaD/DadD BEN78_08625 IPR006680 Amidohydrolase-related BEN78_08625 IPR032466 Metal-dependent hydrolase BEN78_08625 IPR011059 Metal-dependent hydrolase, composite domain superfamily BEN78_08630 IPR020043 Deacetylase Atu3266-like BEN78_08630 IPR011059 Metal-dependent hydrolase, composite domain superfamily BEN78_08630 IPR006680 Amidohydrolase-related BEN78_08630 IPR032466 Metal-dependent hydrolase BEN78_08640 IPR009057 Homeobox-like domain superfamily BEN78_08640 IPR006118 Recombinase, conserved site BEN78_08640 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily BEN78_08640 IPR006120 Resolvase, HTH domain BEN78_08640 IPR006119 Resolvase, N-terminal catalytic domain BEN78_08645 IPR008640 Head domain of trimeric autotransporter adhesin BEN78_08645 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_08645 IPR024973 ESPR domain BEN78_08645 IPR008635 Coiled stalk of trimeric autotransporter adhesin BEN78_08645 IPR005594 YadA-like, C-terminal BEN78_08655 IPR005594 YadA-like, C-terminal BEN78_08655 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_08655 IPR024973 ESPR domain BEN78_08655 IPR008640 Head domain of trimeric autotransporter adhesin BEN78_08655 IPR008635 Coiled stalk of trimeric autotransporter adhesin BEN78_08690 IPR005546 Autotransporter beta-domain BEN78_08690 IPR036709 Autotransporter beta-domain superfamily BEN78_08690 IPR013425 Autotransporter-associated beta strand repeat BEN78_08690 IPR006315 Outer membrane autotransporter barrel BEN78_08690 IPR011050 Pectin lyase fold/virulence factor BEN78_08690 IPR012332 P22 tailspike-like, C-terminal domain superfamily BEN78_08700 IPR013425 Autotransporter-associated beta strand repeat BEN78_08700 IPR006315 Outer membrane autotransporter barrel BEN78_08700 IPR011050 Pectin lyase fold/virulence factor BEN78_08700 IPR012332 P22 tailspike-like, C-terminal domain superfamily BEN78_08700 IPR011050 Pectin lyase fold/virulence factor BEN78_08700 IPR005546 Autotransporter beta-domain BEN78_08700 IPR005546 Autotransporter beta-domain BEN78_08700 IPR036709 Autotransporter beta-domain superfamily BEN78_08700 IPR006315 Outer membrane autotransporter barrel BEN78_08700 IPR036709 Autotransporter beta-domain superfamily BEN78_08700 IPR013425 Autotransporter-associated beta strand repeat BEN78_08700 IPR012332 P22 tailspike-like, C-terminal domain superfamily BEN78_08705 IPR022357 Major intrinsic protein, conserved site BEN78_08705 IPR023743 Aquaporin Z BEN78_08705 IPR000425 Major intrinsic protein BEN78_08705 IPR023271 Aquaporin-like BEN78_08705 IPR034294 Aquaporin transporter BEN78_08710 IPR041703 Transcription termination factor Rho, ATP binding domain BEN78_08710 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain BEN78_08710 IPR011129 Cold shock domain BEN78_08710 IPR012340 Nucleic acid-binding, OB-fold BEN78_08710 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_08710 IPR011112 Rho termination factor, N-terminal BEN78_08710 IPR011113 Rho termination factor, RNA-binding domain BEN78_08710 IPR003593 AAA+ ATPase domain BEN78_08710 IPR004665 Transcription termination factor Rho BEN78_08715 IPR036249 Thioredoxin-like superfamily BEN78_08715 IPR005746 Thioredoxin BEN78_08715 IPR017937 Thioredoxin, conserved site BEN78_08715 IPR013766 Thioredoxin domain BEN78_08725 IPR005286 Cell division protein FtsE, ATP-binding BEN78_08725 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_08725 IPR017871 ABC transporter, conserved site BEN78_08725 IPR003439 ABC transporter-like BEN78_08725 IPR003593 AAA+ ATPase domain BEN78_08730 IPR004513 Cell division protein FtsX BEN78_08730 IPR040690 FtsX, extracellular domain BEN78_08735 IPR002043 Uracil-DNA glycosylase family 1 BEN78_08735 IPR036895 Uracil-DNA glycosylase-like domain superfamily BEN78_08735 IPR005122 Uracil-DNA glycosylase-like BEN78_08735 IPR018085 Uracil-DNA glycosylase, active site BEN78_08745 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family BEN78_08745 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily BEN78_08750 IPR007401 Protein of unknown function DUF454 BEN78_08770 IPR001653 Diaminopimelate epimerase, DapF BEN78_08770 IPR018510 Diaminopimelate epimerase, active site BEN78_08780 IPR004107 Integrase, SAM-like, N-terminal BEN78_08780 IPR002104 Integrase, catalytic domain BEN78_08780 IPR010998 Integrase/recombinase, N-terminal BEN78_08780 IPR013762 Integrase-like, catalytic domain superfamily BEN78_08780 IPR011010 DNA breaking-rejoining enzyme, catalytic core BEN78_08780 IPR023009 Tyrosine recombinase XerC/XerD BEN78_08780 IPR011931 Tyrosine recombinase XerC BEN78_08795 IPR001353 Proteasome, subunit alpha/beta BEN78_08795 IPR023333 Proteasome B-type subunit BEN78_08795 IPR029055 Nucleophile aminohydrolases, N-terminal BEN78_08795 IPR022281 ATP-dependent protease, HslV subunit BEN78_08800 IPR019489 Clp ATPase, C-terminal BEN78_08800 IPR003959 ATPase, AAA-type, core BEN78_08800 IPR004491 Heat shock protein HslU BEN78_08800 IPR003593 AAA+ ATPase domain BEN78_08800 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_08815 IPR039562 Membrane fusion protein, biotin-lipoyl like domain BEN78_08830 IPR005496 Integral membrane protein TerC BEN78_08830 IPR016169 FAD-binding, type PCMH, subdomain 2 BEN78_08830 IPR036318 FAD-binding, type PCMH-like superfamily BEN78_08830 IPR000644 CBS domain BEN78_08830 IPR005170 Transporter-associated domain BEN78_08835 IPR023576 UbiE/COQ5 methyltransferase, conserved site BEN78_08835 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_08835 IPR004033 UbiE/COQ5 methyltransferase BEN78_08840 IPR007581 Endonuclease V BEN78_08845 IPR014782 Peptidase M1, membrane alanine aminopeptidase BEN78_08845 IPR042097 Aminopeptidase N-like , N-terminal BEN78_08845 IPR024571 ERAP1-like C-terminal domain BEN78_08845 IPR034016 Aminopeptidase N-type BEN78_08845 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase BEN78_08865 IPR002528 Multi antimicrobial extrusion protein BEN78_08870 IPR000160 GGDEF domain BEN78_08870 IPR029787 Nucleotide cyclase BEN78_08870 IPR033424 Membrane-associated sensor domain BEN78_08875 IPR005025 NADPH-dependent FMN reductase-like BEN78_08875 IPR029039 Flavoprotein-like superfamily BEN78_08885 IPR029056 Ribokinase-like BEN78_08885 IPR011611 Carbohydrate kinase PfkB BEN78_08885 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site BEN78_08890 IPR004753 Cell shape determining protein MreB BEN78_08895 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 BEN78_08895 IPR007221 Rod shape-determining protein MreC BEN78_08895 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 BEN78_08905 IPR017790 Penicillin-binding protein 2 BEN78_08905 IPR005311 Penicillin-binding protein, dimerisation domain BEN78_08905 IPR036138 Penicillin-binding protein, dimerisation domain superfamily BEN78_08905 IPR001460 Penicillin-binding protein, transpeptidase BEN78_08905 IPR012338 Beta-lactamase/transpeptidase-like BEN78_08910 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA BEN78_08910 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB BEN78_08910 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site BEN78_08915 IPR023346 Lysozyme-like domain superfamily BEN78_08915 IPR031304 Transglycosylase SLT domain 2 BEN78_08915 IPR011757 Lytic transglycosylase MltB BEN78_08925 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal BEN78_08925 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily BEN78_08925 IPR015956 Penicillin-binding protein, C-terminal domain superfamily BEN78_08925 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal BEN78_08925 IPR012338 Beta-lactamase/transpeptidase-like BEN78_08925 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A BEN78_08930 IPR027471 YbeD-like domain superfamily BEN78_08930 IPR007454 Uncharacterised protein family UPF0250 BEN78_08940 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain BEN78_08940 IPR000544 Octanoyltransferase BEN78_08940 IPR020605 Octanoyltransferase, conserved site BEN78_08945 IPR006638 Elp3/MiaB/NifB BEN78_08945 IPR013785 Aldolase-type TIM barrel BEN78_08945 IPR007197 Radical SAM BEN78_08945 IPR003698 Lipoyl synthase BEN78_08945 IPR031691 Lipoyl synthase, N-terminal BEN78_08950 IPR005151 Tail specific protease BEN78_08950 IPR029045 ClpP/crotonase-like domain superfamily BEN78_08950 IPR001478 PDZ domain BEN78_08950 IPR004447 C-terminal-processing peptidase S41A BEN78_08950 IPR040573 Tail specific protease, N-terminal domain BEN78_08950 IPR036034 PDZ superfamily BEN78_08950 IPR020992 Tail specific protease, C-terminal BEN78_08955 IPR004779 Carboxylate/Amino Acid/Amine Transporter BEN78_08955 IPR000620 EamA domain BEN78_08960 IPR004626 RarD protein BEN78_08960 IPR000620 EamA domain BEN78_08980 IPR017911 ABC transporter, macrolide export, ATP-binding domain BEN78_08980 IPR017871 ABC transporter, conserved site BEN78_08980 IPR003439 ABC transporter-like BEN78_08980 IPR025857 MacB-like periplasmic core domain BEN78_08980 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_08980 IPR003838 ABC transporter permease protein domain BEN78_08980 IPR003593 AAA+ ATPase domain BEN78_08985 IPR017871 ABC transporter, conserved site BEN78_08985 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_08985 IPR003439 ABC transporter-like BEN78_08985 IPR003593 AAA+ ATPase domain BEN78_08990 IPR006143 RND efflux pump, membrane fusion protein BEN78_08990 IPR022824 Multidrug resistance protein MdtA BEN78_08990 IPR039562 Membrane fusion protein, biotin-lipoyl like domain BEN78_08995 IPR003593 AAA+ ATPase domain BEN78_08995 IPR017871 ABC transporter, conserved site BEN78_08995 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_08995 IPR003439 ABC transporter-like BEN78_09000 IPR000412 ABC-2 transporter BEN78_09005 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_09005 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_09005 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain BEN78_09010 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_09010 IPR000792 Transcription regulator LuxR, C-terminal BEN78_09010 IPR011006 CheY-like superfamily BEN78_09010 IPR016032 Signal transduction response regulator, C-terminal effector BEN78_09010 IPR001789 Signal transduction response regulator, receiver domain BEN78_09020 IPR023042 Peptidase M17, leucine aminopeptidase BEN78_09020 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal BEN78_09020 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal BEN78_09020 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B BEN78_09050 IPR001940 Peptidase S1C BEN78_09050 IPR001478 PDZ domain BEN78_09050 IPR036034 PDZ superfamily BEN78_09050 IPR009003 Peptidase S1, PA clan BEN78_09050 IPR011782 Peptidase S1C, Do BEN78_09060 IPR001867 OmpR/PhoB-type DNA-binding domain BEN78_09060 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_09060 IPR039420 Transcriptional regulatory protein WalR-like BEN78_09060 IPR011006 CheY-like superfamily BEN78_09060 IPR001789 Signal transduction response regulator, receiver domain BEN78_09065 IPR005330 MHYT domain BEN78_09065 IPR029787 Nucleotide cyclase BEN78_09065 IPR000160 GGDEF domain BEN78_09065 IPR001633 EAL domain BEN78_09065 IPR035919 EAL domain superfamily BEN78_09090 IPR011034 Formyl transferase-like, C-terminal domain superfamily BEN78_09090 IPR003180 Methylpurine-DNA glycosylase BEN78_09090 IPR036995 Methylpurine-DNA glycosylase superfamily BEN78_09095 IPR023459 Transcription elongation factor GreA/GreB family BEN78_09095 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily BEN78_09095 IPR028625 Regulator of nucleoside diphosphate kinase BEN78_09095 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain BEN78_09095 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal BEN78_09120 IPR005764 Adenine phosphoribosyl transferase BEN78_09120 IPR000836 Phosphoribosyltransferase domain BEN78_09120 IPR029057 Phosphoribosyltransferase-like BEN78_09125 IPR000189 Prokaryotic transglycosylase, active site BEN78_09125 IPR008258 Transglycosylase SLT domain 1 BEN78_09125 IPR023346 Lysozyme-like domain superfamily BEN78_09130 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase BEN78_09130 IPR011042 Six-bladed beta-propeller, TolB-like BEN78_09130 IPR012938 Glucose/Sorbosone dehydrogenase BEN78_09160 IPR011764 Biotin carboxylation domain BEN78_09160 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain BEN78_09160 IPR016185 Pre-ATP-grasp domain superfamily BEN78_09160 IPR005481 Biotin carboxylase-like, N-terminal domain BEN78_09160 IPR013815 ATP-grasp fold, subdomain 1 BEN78_09160 IPR005482 Biotin carboxylase, C-terminal BEN78_09160 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase BEN78_09160 IPR011761 ATP-grasp fold BEN78_09160 IPR011054 Rudiment single hybrid motif BEN78_09165 IPR001249 Acetyl-CoA biotin carboxyl carrier BEN78_09165 IPR000089 Biotin/lipoyl attachment BEN78_09165 IPR011053 Single hybrid motif BEN78_09165 IPR001882 Biotin-binding site BEN78_09175 IPR001874 Dehydroquinase, class II BEN78_09175 IPR018509 Dehydroquinase, class II, conserved site BEN78_09175 IPR036441 Dehydroquinase, class II superfamily BEN78_09180 IPR036249 Thioredoxin-like superfamily BEN78_09180 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant BEN78_09180 IPR013766 Thioredoxin domain BEN78_09185 IPR036249 Thioredoxin-like superfamily BEN78_09185 IPR022910 Thiol:disulphide interchange protein DsbD BEN78_09185 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain BEN78_09185 IPR035671 DsbD gamma BEN78_09185 IPR003834 Cytochrome C biogenesis protein, transmembrane domain BEN78_09185 IPR013766 Thioredoxin domain BEN78_09185 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily BEN78_09190 IPR004323 Divalent ion tolerance protein, CutA BEN78_09190 IPR011322 Nitrogen regulatory PII-like, alpha/beta BEN78_09190 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BEN78_09200 IPR018369 Chaperonin GroES, conserved site BEN78_09200 IPR011032 GroES-like superfamily BEN78_09200 IPR037124 GroES chaperonin superfamily BEN78_09200 IPR020818 GroES chaperonin family BEN78_09205 IPR018370 Chaperonin Cpn60, conserved site BEN78_09205 IPR001844 Chaperonin Cpn60 BEN78_09205 IPR027410 TCP-1-like chaperonin intermediate domain superfamily BEN78_09205 IPR027413 GroEL-like equatorial domain superfamily BEN78_09205 IPR027409 GroEL-like apical domain superfamily BEN78_09205 IPR002423 Chaperonin Cpn60/TCP-1 family BEN78_09215 IPR013785 Aldolase-type TIM barrel BEN78_09215 IPR006218 DAHP synthetase I/KDSA BEN78_09215 IPR006219 DHAP synthase, class 1 BEN78_09220 IPR023166 HI0933-like insert domain superfamily BEN78_09220 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_09220 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like BEN78_09225 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_09225 IPR005805 Rieske iron-sulphur protein, C-terminal BEN78_09225 IPR038010 YhfW, C-terminal Rieske domain BEN78_09225 IPR006076 FAD dependent oxidoreductase BEN78_09225 IPR017941 Rieske [2Fe-2S] iron-sulphur domain BEN78_09225 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily BEN78_09230 IPR000305 GIY-YIG endonuclease BEN78_09230 IPR035901 GIY-YIG endonuclease superfamily BEN78_09235 IPR037171 NagB/RpiA transferase-like BEN78_09235 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain BEN78_09235 IPR003702 Acetyl-CoA hydrolase/transferase BEN78_09235 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily BEN78_09235 IPR017821 Succinate CoA transferase BEN78_09240 IPR004276 Glycosyltransferase family 28, N-terminal domain BEN78_09240 IPR006009 N-acetylglucosaminyltransferase, MurG BEN78_09240 IPR007235 Glycosyl transferase, family 28, C-terminal BEN78_09245 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase BEN78_09245 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme BEN78_09245 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain BEN78_09250 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_09250 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN78_09250 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria BEN78_09250 IPR007630 RNA polymerase sigma-70 region 4 BEN78_09250 IPR007627 RNA polymerase sigma-70 region 2 BEN78_09250 IPR000943 RNA polymerase sigma-70 BEN78_09250 IPR014284 RNA polymerase sigma-70 like domain BEN78_09250 IPR013325 RNA polymerase sigma factor, region 2 BEN78_09255 IPR003689 Zinc/iron permease BEN78_09255 IPR023498 Zinc transporter ZupT BEN78_09265 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm BEN78_09265 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily BEN78_09265 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding BEN78_09265 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm BEN78_09265 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding BEN78_09265 IPR033705 Valyl tRNA synthetase, anticodon-binding domain BEN78_09265 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_09265 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain BEN78_09265 IPR002303 Valine-tRNA ligase BEN78_09265 IPR002300 Aminoacyl-tRNA synthetase, class Ia BEN78_09265 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BEN78_09275 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B BEN78_09275 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal BEN78_09275 IPR023042 Peptidase M17, leucine aminopeptidase BEN78_09275 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal BEN78_09295 IPR013762 Integrase-like, catalytic domain superfamily BEN78_09295 IPR011010 DNA breaking-rejoining enzyme, catalytic core BEN78_09295 IPR002104 Integrase, catalytic domain BEN78_09295 IPR010998 Integrase/recombinase, N-terminal BEN78_09295 IPR004107 Integrase, SAM-like, N-terminal BEN78_09295 IPR023009 Tyrosine recombinase XerC/XerD BEN78_09295 IPR011932 Tyrosine recombinase XerD BEN78_09305 IPR036676 PurM-like, C-terminal domain superfamily BEN78_09305 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain BEN78_09305 IPR010073 Phosphoribosylformylglycinamidine synthase PurL BEN78_09305 IPR017926 Glutamine amidotransferase BEN78_09305 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal BEN78_09305 IPR010918 PurM-like, C-terminal domain BEN78_09305 IPR029062 Class I glutamine amidotransferase-like BEN78_09305 IPR036921 PurM-like, N-terminal domain superfamily BEN78_09305 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily BEN78_09320 IPR036852 Peptidase S8/S53 domain superfamily BEN78_09320 IPR000209 Peptidase S8/S53 domain BEN78_09320 IPR034176 Peptidase MprA-like catalytic domain BEN78_09320 IPR007280 Peptidase, C-terminal, archaeal/bacterial BEN78_09320 IPR022398 Peptidase S8, subtilisin, His-active site BEN78_09320 IPR023828 Peptidase S8, subtilisin, Ser-active site BEN78_09320 IPR023827 Peptidase S8, subtilisin, Asp-active site BEN78_09320 IPR015500 Peptidase S8, subtilisin-related BEN78_09335 IPR042181 Type II secretion system, protein E, N-terminal BEN78_09335 IPR007831 General secretory system II, protein E, N-terminal BEN78_09335 IPR013369 Type II secretion system GspE BEN78_09335 IPR037257 General secretory system II, protein E, N-terminal superfamily BEN78_09335 IPR001482 Type II/IV secretion system protein BEN78_09335 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_09335 IPR003593 AAA+ ATPase domain BEN78_09345 IPR018076 Type II secretion system F domain BEN78_09345 IPR042094 Type II secretion system F domain superfamily BEN78_09345 IPR001992 Type II secretion system conserved site BEN78_09345 IPR003004 GspF/PilC family BEN78_09365 IPR000983 Bacterial general secretion pathway protein G-type pilin BEN78_09365 IPR010054 General secretion pathway protein G BEN78_09365 IPR013545 Type II secretion system protein G BEN78_09365 IPR012902 Prokaryotic N-terminal methylation site BEN78_09370 IPR022346 General secretion pathway, GspH BEN78_09370 IPR002416 Type II secretion system protein H BEN78_09375 IPR010052 Type II secretion system protein I BEN78_09375 IPR012902 Prokaryotic N-terminal methylation site BEN78_09380 IPR012902 Prokaryotic N-terminal methylation site BEN78_09385 IPR005628 General secretion pathway protein K BEN78_09385 IPR038072 GspK, central domain superfamily BEN78_09390 IPR007813 Fimbrial assembly PilN BEN78_09395 IPR034756 Type II secretion system (T2SS), protein M subtype b BEN78_09405 IPR038591 NolW-like superfamily BEN78_09405 IPR005644 NolW-like BEN78_09405 IPR013356 Type II secretion system GspD BEN78_09405 IPR004845 Type II secretion system GspD, conserved site BEN78_09405 IPR004846 Type II/III secretion system BEN78_09405 IPR001775 GspD/PilQ family BEN78_09415 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_09420 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase BEN78_09420 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain BEN78_09420 IPR006406 Nicotinate phosphoribosyltransferase BEN78_09420 IPR007229 Nicotinate phosphoribosyltransferase family BEN78_09420 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal BEN78_09430 IPR011060 Ribulose-phosphate binding barrel BEN78_09430 IPR001754 Orotidine 5'-phosphate decarboxylase domain BEN78_09430 IPR013785 Aldolase-type TIM barrel BEN78_09430 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 BEN78_09430 IPR018089 Orotidine 5'-phosphate decarboxylase, active site BEN78_09435 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 BEN78_09435 IPR001714 Peptidase M24, methionine aminopeptidase BEN78_09435 IPR000994 Peptidase M24 BEN78_09435 IPR036005 Creatinase/aminopeptidase-like BEN78_09440 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_09445 IPR032781 ABC-transporter extension domain BEN78_09445 IPR003439 ABC transporter-like BEN78_09445 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_09445 IPR022374 Energy-dependent translational throttle protein EttA BEN78_09445 IPR017871 ABC transporter, conserved site BEN78_09445 IPR003593 AAA+ ATPase domain BEN78_09450 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BEN78_09450 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BEN78_09450 IPR001085 Serine hydroxymethyltransferase BEN78_09450 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_09450 IPR039429 Serine hydroxymethyltransferase-like domain BEN78_09450 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site BEN78_09455 IPR003796 Ribonucleotide reductase regulator NrdR-like BEN78_09455 IPR005144 ATP-cone domain BEN78_09460 IPR016192 APOBEC/CMP deaminase, zinc-binding BEN78_09460 IPR002125 Cytidine and deoxycytidylate deaminase domain BEN78_09460 IPR004794 Riboflavin biosynthesis protein RibD BEN78_09460 IPR011549 Riboflavin-specific deaminase, C-terminal BEN78_09460 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal BEN78_09460 IPR024072 Dihydrofolate reductase-like domain superfamily BEN78_09460 IPR016193 Cytidine deaminase-like BEN78_09465 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily BEN78_09465 IPR001783 Lumazine-binding protein BEN78_09465 IPR026017 Lumazine-binding domain BEN78_09465 IPR017938 Riboflavin synthase-like beta-barrel BEN78_09470 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily BEN78_09470 IPR032677 GTP cyclohydrolase II BEN78_09470 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB BEN78_09470 IPR036144 RibA-like superfamily BEN78_09475 IPR036467 Lumazine/riboflavin synthase superfamily BEN78_09475 IPR002180 Lumazine/riboflavin synthase BEN78_09475 IPR034964 Lumazine synthase BEN78_09480 IPR006027 NusB/RsmB/TIM44 BEN78_09480 IPR011605 NusB antitermination factor BEN78_09480 IPR035926 NusB-like superfamily BEN78_09485 IPR010918 PurM-like, C-terminal domain BEN78_09485 IPR036921 PurM-like, N-terminal domain superfamily BEN78_09485 IPR036676 PurM-like, C-terminal domain superfamily BEN78_09485 IPR006283 Thiamine-monophosphate kinase BEN78_09485 IPR016188 PurM-like, N-terminal domain BEN78_09495 IPR011335 Restriction endonuclease type II-like BEN78_09495 IPR003509 Uncharacterised protein family UPF0102 BEN78_09495 IPR011856 tRNA endonuclease-like domain superfamily BEN78_09510 IPR000878 Tetrapyrrole methylase BEN78_09510 IPR014776 Tetrapyrrole methylase, subdomain 2 BEN78_09510 IPR014777 Tetrapyrrole methylase, subdomain 1 BEN78_09510 IPR008189 rRNA small subunit methyltransferase I BEN78_09510 IPR018063 SAM-dependent methyltransferase RsmI, conserved site BEN78_09510 IPR035996 Tetrapyrrole methylase superfamily BEN78_09525 IPR037914 SpoVT-AbrB domain superfamily BEN78_09525 IPR007159 SpoVT-AbrB domain BEN78_09525 IPR038619 MraZ superfamily BEN78_09525 IPR035642 MraZ, N-terminal BEN78_09525 IPR035644 MraZ, C-terminal BEN78_09525 IPR020603 MraZ domain BEN78_09525 IPR003444 Transcriptional regulator MraZ BEN78_09530 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_09530 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily BEN78_09530 IPR002903 Ribosomal RNA small subunit methyltransferase H BEN78_09535 IPR011922 Cell division protein FtsL BEN78_09540 IPR037532 Peptidoglycan D,D-transpeptidase FtsI BEN78_09540 IPR005311 Penicillin-binding protein, dimerisation domain BEN78_09540 IPR036138 Penicillin-binding protein, dimerisation domain superfamily BEN78_09540 IPR001460 Penicillin-binding protein, transpeptidase BEN78_09540 IPR012338 Beta-lactamase/transpeptidase-like BEN78_09545 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase BEN78_09545 IPR035911 MurE/MurF, N-terminal BEN78_09545 IPR013221 Mur ligase, central BEN78_09545 IPR036615 Mur ligase, C-terminal domain superfamily BEN78_09545 IPR004101 Mur ligase, C-terminal BEN78_09545 IPR036565 Mur-like, catalytic domain superfamily BEN78_09545 IPR000713 Mur ligase, N-terminal catalytic domain BEN78_09550 IPR035911 MurE/MurF, N-terminal BEN78_09550 IPR036565 Mur-like, catalytic domain superfamily BEN78_09550 IPR004101 Mur ligase, C-terminal BEN78_09550 IPR036615 Mur ligase, C-terminal domain superfamily BEN78_09550 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase BEN78_09550 IPR000713 Mur ligase, N-terminal catalytic domain BEN78_09550 IPR013221 Mur ligase, central BEN78_09555 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase BEN78_09555 IPR000715 Glycosyl transferase, family 4 BEN78_09555 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site BEN78_09560 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA BEN78_09560 IPR013437 Probable peptidoglycan glycosyltransferase FtsW BEN78_09565 IPR005758 UDP-N-acetylmuramate--L-alanine ligase BEN78_09565 IPR000713 Mur ligase, N-terminal catalytic domain BEN78_09565 IPR013221 Mur ligase, central BEN78_09565 IPR036615 Mur ligase, C-terminal domain superfamily BEN78_09565 IPR004101 Mur ligase, C-terminal BEN78_09565 IPR036565 Mur-like, catalytic domain superfamily BEN78_09570 IPR011761 ATP-grasp fold BEN78_09570 IPR011127 D-alanine--D-alanine ligase, N-terminal domain BEN78_09570 IPR011095 D-alanine--D-alanine ligase, C-terminal BEN78_09570 IPR005905 D-alanine--D-alanine ligase BEN78_09570 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site BEN78_09570 IPR013815 ATP-grasp fold, subdomain 1 BEN78_09570 IPR016185 Pre-ATP-grasp domain superfamily BEN78_09575 IPR026579 Cell division protein FtsQ BEN78_09575 IPR034746 POTRA domain BEN78_09575 IPR013685 POTRA domain, FtsQ-type BEN78_09575 IPR005548 Cell division protein FtsQ/DivIB BEN78_09580 IPR003494 SHS2 domain inserted in FtsA BEN78_09580 IPR020823 Cell division protein FtsA BEN78_09585 IPR024757 Cell division protein FtsZ, C-terminal BEN78_09585 IPR008280 Tubulin/FtsZ, C-terminal BEN78_09585 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain BEN78_09585 IPR036525 Tubulin/FtsZ, GTPase domain superfamily BEN78_09585 IPR003008 Tubulin/FtsZ, GTPase domain BEN78_09585 IPR020805 Cell division protein FtsZ, conserved site BEN78_09585 IPR000158 Cell division protein FtsZ BEN78_09590 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal BEN78_09590 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase BEN78_09590 IPR020568 Ribosomal protein S5 domain 2-type fold BEN78_09590 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal BEN78_09600 IPR016047 Peptidase M23 BEN78_09600 IPR018392 LysM domain BEN78_09600 IPR011055 Duplicated hybrid motif BEN78_09600 IPR013731 Opacity-associated protein A, N-terminal BEN78_09605 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_09605 IPR004027 SEC-C motif BEN78_09605 IPR000185 Protein translocase subunit SecA BEN78_09605 IPR020937 SecA conserved site BEN78_09605 IPR036670 SecA, preprotein cross-linking domain superfamily BEN78_09605 IPR014018 SecA motor DEAD BEN78_09605 IPR036266 SecA, Wing/Scaffold superfamily BEN78_09605 IPR011130 SecA, preprotein cross-linking domain BEN78_09605 IPR011115 SecA DEAD-like, N-terminal BEN78_09605 IPR011116 SecA Wing/Scaffold BEN78_09610 IPR003561 Mutator MutT BEN78_09610 IPR020084 NUDIX hydrolase, conserved site BEN78_09610 IPR015797 NUDIX hydrolase-like domain superfamily BEN78_09610 IPR000086 NUDIX hydrolase domain BEN78_09610 IPR020476 NUDIX hydrolase BEN78_09615 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_09615 IPR001977 Dephospho-CoA kinase BEN78_09620 IPR010627 Peptidase A24A, N-terminal BEN78_09620 IPR000045 Prepilin type IV endopeptidase, peptidase domain BEN78_09620 IPR014032 Peptidase A24A, prepilin type IV, bacterial BEN78_09625 IPR018076 Type II secretion system F domain BEN78_09625 IPR001992 Type II secretion system conserved site BEN78_09625 IPR003004 GspF/PilC family BEN78_09625 IPR042094 Type II secretion system F domain superfamily BEN78_09630 IPR042181 Type II secretion system, protein E, N-terminal BEN78_09630 IPR013374 ATPase, type IV, pilus assembly, PilB BEN78_09630 IPR007831 General secretory system II, protein E, N-terminal BEN78_09630 IPR037257 General secretory system II, protein E, N-terminal superfamily BEN78_09630 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_09630 IPR001482 Type II/IV secretion system protein BEN78_09640 IPR006119 Resolvase, N-terminal catalytic domain BEN78_09640 IPR006118 Recombinase, conserved site BEN78_09640 IPR009057 Homeobox-like domain superfamily BEN78_09640 IPR006120 Resolvase, HTH domain BEN78_09640 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily BEN78_09645 IPR005594 YadA-like, C-terminal BEN78_09645 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_09645 IPR024973 ESPR domain BEN78_09645 IPR008635 Coiled stalk of trimeric autotransporter adhesin BEN78_09645 IPR008640 Head domain of trimeric autotransporter adhesin BEN78_09675 IPR012332 P22 tailspike-like, C-terminal domain superfamily BEN78_09675 IPR013425 Autotransporter-associated beta strand repeat BEN78_09675 IPR012332 P22 tailspike-like, C-terminal domain superfamily BEN78_09675 IPR036709 Autotransporter beta-domain superfamily BEN78_09675 IPR005546 Autotransporter beta-domain BEN78_09675 IPR011050 Pectin lyase fold/virulence factor BEN78_09675 IPR006315 Outer membrane autotransporter barrel BEN78_09675 IPR013425 Autotransporter-associated beta strand repeat BEN78_09675 IPR006315 Outer membrane autotransporter barrel BEN78_09675 IPR011050 Pectin lyase fold/virulence factor BEN78_09675 IPR036709 Autotransporter beta-domain superfamily BEN78_09675 IPR005546 Autotransporter beta-domain BEN78_09685 IPR011050 Pectin lyase fold/virulence factor BEN78_09685 IPR005546 Autotransporter beta-domain BEN78_09685 IPR036709 Autotransporter beta-domain superfamily BEN78_09685 IPR006315 Outer membrane autotransporter barrel BEN78_09685 IPR006315 Outer membrane autotransporter barrel BEN78_09685 IPR012332 P22 tailspike-like, C-terminal domain superfamily BEN78_09685 IPR012332 P22 tailspike-like, C-terminal domain superfamily BEN78_09685 IPR011050 Pectin lyase fold/virulence factor BEN78_09685 IPR013425 Autotransporter-associated beta strand repeat BEN78_09685 IPR005546 Autotransporter beta-domain BEN78_09685 IPR013425 Autotransporter-associated beta strand repeat BEN78_09685 IPR036709 Autotransporter beta-domain superfamily BEN78_09690 IPR005546 Autotransporter beta-domain BEN78_09690 IPR012332 P22 tailspike-like, C-terminal domain superfamily BEN78_09690 IPR013425 Autotransporter-associated beta strand repeat BEN78_09690 IPR006315 Outer membrane autotransporter barrel BEN78_09690 IPR012332 P22 tailspike-like, C-terminal domain superfamily BEN78_09690 IPR011050 Pectin lyase fold/virulence factor BEN78_09690 IPR013425 Autotransporter-associated beta strand repeat BEN78_09690 IPR036709 Autotransporter beta-domain superfamily BEN78_09690 IPR036709 Autotransporter beta-domain superfamily BEN78_09690 IPR005546 Autotransporter beta-domain BEN78_09690 IPR006315 Outer membrane autotransporter barrel BEN78_09690 IPR011050 Pectin lyase fold/virulence factor BEN78_09695 IPR000425 Major intrinsic protein BEN78_09695 IPR022357 Major intrinsic protein, conserved site BEN78_09695 IPR034294 Aquaporin transporter BEN78_09695 IPR023271 Aquaporin-like BEN78_09695 IPR023743 Aquaporin Z BEN78_09710 IPR033479 Double Cache domain 1 BEN78_09710 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_09710 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_09710 IPR005467 Histidine kinase domain BEN78_09710 IPR029151 Periplasmic sensor-like domain superfamily BEN78_09710 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BEN78_09710 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BEN78_09710 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BEN78_09715 IPR029787 Nucleotide cyclase BEN78_09715 IPR007894 MASE2 BEN78_09715 IPR000160 GGDEF domain BEN78_09720 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BEN78_09720 IPR003593 AAA+ ATPase domain BEN78_09720 IPR011006 CheY-like superfamily BEN78_09720 IPR009057 Homeobox-like domain superfamily BEN78_09720 IPR002197 DNA binding HTH domain, Fis-type BEN78_09720 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_09720 IPR001789 Signal transduction response regulator, receiver domain BEN78_09720 IPR002078 RNA polymerase sigma factor 54 interaction domain BEN78_09720 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BEN78_09720 IPR025944 Sigma-54 interaction domain, conserved site BEN78_09725 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BEN78_09725 IPR005467 Histidine kinase domain BEN78_09725 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_09725 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_09725 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BEN78_09725 IPR000014 PAS domain BEN78_09725 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BEN78_09730 IPR016102 Succinyl-CoA synthetase-like BEN78_09730 IPR005809 Succinate--CoA synthetase, beta subunit BEN78_09730 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site BEN78_09730 IPR005811 ATP-citrate lyase/succinyl-CoA ligase BEN78_09730 IPR013815 ATP-grasp fold, subdomain 1 BEN78_09730 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type BEN78_09730 IPR011761 ATP-grasp fold BEN78_09735 IPR003781 CoA-binding BEN78_09735 IPR005810 Succinyl-CoA ligase, alpha subunit BEN78_09735 IPR005811 ATP-citrate lyase/succinyl-CoA ligase BEN78_09735 IPR036291 NAD(P)-binding domain superfamily BEN78_09735 IPR016102 Succinyl-CoA synthetase-like BEN78_09735 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site BEN78_09735 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site BEN78_09745 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor BEN78_09745 IPR002712 Toxin CcdB BEN78_09750 IPR003010 Carbon-nitrogen hydrolase BEN78_09750 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_09750 IPR000132 Nitrilase/cyanide hydratase, conserved site BEN78_09750 IPR003694 NAD(+) synthetase BEN78_09750 IPR036526 Carbon-nitrogen hydrolase superfamily BEN78_09750 IPR014445 Glutamine-dependent NAD(+) synthetase BEN78_09750 IPR022310 NAD/GMP synthase BEN78_09760 IPR009042 RNA polymerase sigma-70 region 1.2 BEN78_09760 IPR042189 Sigma-70 factor, region 1.1 superfamily BEN78_09760 IPR013325 RNA polymerase sigma factor, region 2 BEN78_09760 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN78_09760 IPR012760 RNA polymerase sigma factor RpoD, C-terminal BEN78_09760 IPR028630 RNA polymerase sigma factor RpoD BEN78_09760 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_09760 IPR007127 RNA polymerase sigma factor 70, region 1.1 BEN78_09760 IPR007630 RNA polymerase sigma-70 region 4 BEN78_09760 IPR007627 RNA polymerase sigma-70 region 2 BEN78_09760 IPR014284 RNA polymerase sigma-70 like domain BEN78_09760 IPR000943 RNA polymerase sigma-70 BEN78_09760 IPR007631 RNA polymerase sigma factor 70, non-essential domain BEN78_09760 IPR007624 RNA polymerase sigma-70 region 3 BEN78_09770 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup BEN78_09770 IPR037171 NagB/RpiA transferase-like BEN78_09770 IPR004788 Ribose 5-phosphate isomerase, type A BEN78_09780 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily BEN78_09780 IPR002698 5-formyltetrahydrofolate cyclo-ligase BEN78_09780 IPR037171 NagB/RpiA transferase-like BEN78_09800 IPR000160 GGDEF domain BEN78_09800 IPR005330 MHYT domain BEN78_09800 IPR029787 Nucleotide cyclase BEN78_09800 IPR035919 EAL domain superfamily BEN78_09800 IPR001633 EAL domain BEN78_09810 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site BEN78_09810 IPR001714 Peptidase M24, methionine aminopeptidase BEN78_09810 IPR000994 Peptidase M24 BEN78_09810 IPR036005 Creatinase/aminopeptidase-like BEN78_09810 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BEN78_09810 IPR007865 Aminopeptidase P, N-terminal BEN78_09815 IPR022846 Xaa-Pro dipeptidase BEN78_09815 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site BEN78_09815 IPR000994 Peptidase M24 BEN78_09815 IPR036005 Creatinase/aminopeptidase-like BEN78_09815 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BEN78_09820 IPR004559 Heme chaperone HemW-like BEN78_09820 IPR010723 HemN, C-terminal BEN78_09820 IPR006638 Elp3/MiaB/NifB BEN78_09820 IPR007197 Radical SAM BEN78_09820 IPR034505 Anaerobic coproporphyrinogen-III oxidase BEN78_09820 IPR023404 Radical SAM, alpha/beta horseshoe BEN78_09825 IPR029001 Inosine triphosphate pyrophosphatase-like BEN78_09825 IPR002637 Ham1-like protein BEN78_09825 IPR020922 dITP/XTP pyrophosphatase BEN78_09830 IPR020568 Ribosomal protein S5 domain 2-type fold BEN78_09830 IPR018336 Ribonuclease PH, conserved site BEN78_09830 IPR002381 Ribonuclease PH, bacterial-type BEN78_09830 IPR036345 Exoribonuclease, PH domain 2 superfamily BEN78_09830 IPR027408 PNPase/RNase PH domain superfamily BEN78_09830 IPR001247 Exoribonuclease, phosphorolytic domain 1 BEN78_09830 IPR015847 Exoribonuclease, phosphorolytic domain 2 BEN78_09835 IPR013527 YicC-like, N-terminal BEN78_09835 IPR013551 Domain of unknown function DUF1732 BEN78_09835 IPR005229 Conserved hypothetical protein CHP00255 BEN78_09840 IPR010916 TonB box, conserved site BEN78_09840 IPR039426 Vitamin B12 transporter BtuB-like BEN78_09840 IPR012910 TonB-dependent receptor, plug domain BEN78_09840 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_09840 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_09840 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_09840 IPR010105 TonB-dependent siderophore receptor BEN78_09840 IPR010917 TonB-dependent receptor, conserved site BEN78_09845 IPR000120 Amidase BEN78_09845 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit BEN78_09845 IPR036928 Amidase signature (AS) superfamily BEN78_09845 IPR023631 Amidase signature domain BEN78_09845 IPR020556 Amidase, conserved site BEN78_09850 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain BEN78_09850 IPR011659 WD40-like Beta Propeller BEN78_09850 IPR029058 Alpha/Beta hydrolase fold BEN78_09850 IPR011042 Six-bladed beta-propeller, TolB-like BEN78_09865 IPR008144 Guanylate kinase-like domain BEN78_09865 IPR017665 Guanylate kinase BEN78_09865 IPR020590 Guanylate kinase, conserved site BEN78_09865 IPR008145 Guanylate kinase/L-type calcium channel beta subunit BEN78_09865 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_09870 IPR012293 RNA polymerase subunit, RPB6/omega BEN78_09870 IPR006110 RNA polymerase, subunit omega/K/RPB6 BEN78_09870 IPR036161 RPB6/omega subunit-like superfamily BEN78_09870 IPR003716 DNA-directed RNA polymerase, omega subunit BEN78_09875 IPR012676 TGS-like BEN78_09875 IPR003607 HD/PDEase domain BEN78_09875 IPR004811 RelA/SpoT family BEN78_09875 IPR007685 RelA/SpoT BEN78_09875 IPR004095 TGS BEN78_09875 IPR033655 RelA, TGS domain BEN78_09875 IPR012675 Beta-grasp domain superfamily BEN78_09875 IPR002912 ACT domain BEN78_09880 IPR006056 RidA family BEN78_09880 IPR019897 RidA, conserved site BEN78_09880 IPR006175 YjgF/YER057c/UK114 family BEN78_09880 IPR035959 RutC-like superfamily BEN78_09885 IPR011545 DEAD/DEAH box helicase domain BEN78_09885 IPR004609 ATP-dependent DNA helicase RecG BEN78_09885 IPR033454 RecG, wedge domain BEN78_09885 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_09885 IPR012340 Nucleic acid-binding, OB-fold BEN78_09885 IPR001650 Helicase, C-terminal BEN78_09885 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN78_09890 IPR000792 Transcription regulator LuxR, C-terminal BEN78_09890 IPR001789 Signal transduction response regulator, receiver domain BEN78_09890 IPR016032 Signal transduction response regulator, C-terminal effector BEN78_09890 IPR030864 Transcriptional regulatory protein RcsB BEN78_09890 IPR011006 CheY-like superfamily BEN78_09890 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_09895 IPR008635 Coiled stalk of trimeric autotransporter adhesin BEN78_09895 IPR024973 ESPR domain BEN78_09895 IPR005594 YadA-like, C-terminal BEN78_09895 IPR008640 Head domain of trimeric autotransporter adhesin BEN78_09895 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_09900 IPR008635 Coiled stalk of trimeric autotransporter adhesin BEN78_09900 IPR005594 YadA-like, C-terminal BEN78_09900 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_09900 IPR024973 ESPR domain BEN78_09900 IPR008640 Head domain of trimeric autotransporter adhesin BEN78_09910 IPR022977 Pyrimidine-specific ribonucleoside hydrolase RihB BEN78_09910 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site BEN78_09910 IPR036452 Ribonucleoside hydrolase-like BEN78_09910 IPR023186 Inosine/uridine-preferring nucleoside hydrolase BEN78_09910 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain BEN78_09915 IPR027493 Ribosomal protein L31 type B BEN78_09915 IPR002150 Ribosomal protein L31 BEN78_09915 IPR042105 Ribosomal protein L31 superfamily BEN78_09915 IPR034704 L28p-like BEN78_09920 IPR036969 Citrate synthase superfamily BEN78_09920 IPR024176 Citrate synthase, bacterial-type BEN78_09920 IPR019810 Citrate synthase active site BEN78_09920 IPR002020 Citrate synthase BEN78_09920 IPR010953 Citrate synthase, type I BEN78_09920 IPR016143 Citrate synthase-like, small alpha subdomain BEN78_09920 IPR016142 Citrate synthase-like, large alpha subdomain BEN78_09930 IPR012338 Beta-lactamase/transpeptidase-like BEN78_09930 IPR023346 Lysozyme-like domain superfamily BEN78_09930 IPR036950 Penicillin binding protein transglycosylase domain BEN78_09930 IPR031376 Penicillin-binding protein, OB-like domain BEN78_09930 IPR001460 Penicillin-binding protein, transpeptidase BEN78_09930 IPR001264 Glycosyl transferase, family 51 BEN78_09955 IPR005644 NolW-like BEN78_09955 IPR001775 GspD/PilQ family BEN78_09955 IPR038591 NolW-like superfamily BEN78_09955 IPR013355 Type IV pilus secretin PilQ BEN78_09955 IPR021731 AMIN domain BEN78_09955 IPR004845 Type II secretion system GspD, conserved site BEN78_09955 IPR004846 Type II/III secretion system BEN78_09955 IPR011662 Secretin/TonB, short N-terminal domain BEN78_09960 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_09960 IPR011703 ATPase, AAA-3 BEN78_09960 IPR041628 ChlI/MoxR, AAA lid domain BEN78_09990 IPR001991 Sodium:dicarboxylate symporter BEN78_09990 IPR036458 Sodium:dicarboxylate symporter superfamily BEN78_09990 IPR033380 Glutamate-aspartate symport protein GltP/GltT BEN78_09990 IPR018107 Sodium:dicarboxylate symporter, conserved site BEN78_09995 IPR002177 DNA-binding protein Dps BEN78_09995 IPR023188 DNA-binding protein Dps, conserved site BEN78_09995 IPR012347 Ferritin-like BEN78_09995 IPR009078 Ferritin-like superfamily BEN78_09995 IPR008331 Ferritin/DPS protein domain BEN78_10000 IPR003593 AAA+ ATPase domain BEN78_10000 IPR011545 DEAD/DEAH box helicase domain BEN78_10000 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_10000 IPR010222 RNA helicase HrpA BEN78_10000 IPR011709 Domain of unknown function DUF1605 BEN78_10000 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN78_10000 IPR024590 RNA helicase HrpA, C-terminal BEN78_10000 IPR001650 Helicase, C-terminal BEN78_10000 IPR007502 Helicase-associated domain BEN78_10015 IPR007685 RelA/SpoT BEN78_10015 IPR033655 RelA, TGS domain BEN78_10015 IPR004811 RelA/SpoT family BEN78_10015 IPR003607 HD/PDEase domain BEN78_10015 IPR012675 Beta-grasp domain superfamily BEN78_10015 IPR002912 ACT domain BEN78_10015 IPR004095 TGS BEN78_10015 IPR012676 TGS-like BEN78_10030 IPR023346 Lysozyme-like domain superfamily BEN78_10030 IPR001264 Glycosyl transferase, family 51 BEN78_10030 IPR011813 Penicillin-binding protein 1B BEN78_10030 IPR012338 Beta-lactamase/transpeptidase-like BEN78_10030 IPR028166 Bifunctional transglycosylase second domain BEN78_10030 IPR001460 Penicillin-binding protein, transpeptidase BEN78_10030 IPR036950 Penicillin binding protein transglycosylase domain BEN78_10040 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type BEN78_10040 IPR006935 Helicase/UvrB, N-terminal BEN78_10040 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN78_10040 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_10040 IPR006555 ATP-dependent helicase, C-terminal BEN78_10045 IPR000905 Gcp-like domain BEN78_10045 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB BEN78_10055 IPR004033 UbiE/COQ5 methyltransferase BEN78_10055 IPR023576 UbiE/COQ5 methyltransferase, conserved site BEN78_10055 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_10065 IPR006284 Glutathione synthetase, prokaryotic BEN78_10065 IPR004215 Prokaryotic glutathione synthetase, N-terminal BEN78_10065 IPR016185 Pre-ATP-grasp domain superfamily BEN78_10065 IPR004218 Prokaryotic glutathione synthetase, ATP-binding BEN78_10065 IPR011761 ATP-grasp fold BEN78_10065 IPR013815 ATP-grasp fold, subdomain 1 BEN78_10070 IPR011006 CheY-like superfamily BEN78_10070 IPR001789 Signal transduction response regulator, receiver domain BEN78_10075 IPR011006 CheY-like superfamily BEN78_10075 IPR001789 Signal transduction response regulator, receiver domain BEN78_10080 IPR036061 CheW-like domain superfamily BEN78_10080 IPR002545 CheW-like domain BEN78_10080 IPR039315 Chemotaxis protein CheW BEN78_10085 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BEN78_10085 IPR029095 NarX-like, N-terminal BEN78_10085 IPR004090 Chemotaxis methyl-accepting receptor BEN78_10085 IPR003660 HAMP domain BEN78_10090 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain BEN78_10090 IPR002545 CheW-like domain BEN78_10090 IPR036641 HPT domain superfamily BEN78_10090 IPR005467 Histidine kinase domain BEN78_10090 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_10090 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_10090 IPR035891 CheY-binding domain of CheA BEN78_10090 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding BEN78_10090 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BEN78_10090 IPR036061 CheW-like domain superfamily BEN78_10090 IPR004105 Histidine kinase CheA-like, homodimeric domain BEN78_10110 IPR015947 PUA-like superfamily BEN78_10110 IPR029028 Alpha/beta knot methyltransferases BEN78_10110 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BEN78_10110 IPR006700 Ribosomal RNA small subunit methyltransferase E BEN78_10115 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BEN78_10115 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA BEN78_10115 IPR005814 Aminotransferase class-III BEN78_10115 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BEN78_10115 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_10120 IPR000086 NUDIX hydrolase domain BEN78_10120 IPR015797 NUDIX hydrolase-like domain superfamily BEN78_10120 IPR020084 NUDIX hydrolase, conserved site BEN78_10125 IPR000760 Inositol monophosphatase-like BEN78_10125 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ BEN78_10125 IPR020550 Inositol monophosphatase, conserved site BEN78_10125 IPR020583 Inositol monophosphatase, metal-binding site BEN78_10130 IPR011551 NTP pyrophosphohydrolase MazG BEN78_10130 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core BEN78_10135 IPR003844 Uncharacterised protein family UPF0060 BEN78_10145 IPR016032 Signal transduction response regulator, C-terminal effector BEN78_10145 IPR001789 Signal transduction response regulator, receiver domain BEN78_10145 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_10145 IPR039420 Transcriptional regulatory protein WalR-like BEN78_10145 IPR001867 OmpR/PhoB-type DNA-binding domain BEN78_10145 IPR011006 CheY-like superfamily BEN78_10150 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BEN78_10150 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BEN78_10150 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_10150 IPR013727 Two-component sensor kinase, N-terminal BEN78_10150 IPR005467 Histidine kinase domain BEN78_10150 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_10150 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BEN78_10155 IPR022824 Multidrug resistance protein MdtA BEN78_10155 IPR006143 RND efflux pump, membrane fusion protein BEN78_10155 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BEN78_10165 IPR003593 AAA+ ATPase domain BEN78_10165 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_10165 IPR003439 ABC transporter-like BEN78_10165 IPR017871 ABC transporter, conserved site BEN78_10165 IPR017911 ABC transporter, macrolide export, ATP-binding domain BEN78_10165 IPR025857 MacB-like periplasmic core domain BEN78_10165 IPR003838 ABC transporter permease protein domain BEN78_10170 IPR017911 ABC transporter, macrolide export, ATP-binding domain BEN78_10170 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_10170 IPR003593 AAA+ ATPase domain BEN78_10170 IPR003439 ABC transporter-like BEN78_10170 IPR003838 ABC transporter permease protein domain BEN78_10170 IPR017871 ABC transporter, conserved site BEN78_10170 IPR025857 MacB-like periplasmic core domain BEN78_10185 IPR005877 YSIRK Gram-positive signal peptide BEN78_10185 IPR038765 Papain-like cysteine peptidase superfamily BEN78_10185 IPR007921 CHAP domain BEN78_10185 IPR018392 LysM domain BEN78_10185 IPR036779 LysM domain superfamily BEN78_10200 IPR033718 Diacylglycerol kinase, prokaryotic BEN78_10200 IPR000829 DAGK family BEN78_10200 IPR036945 Diacylglycerol kinase (DAGK) superfamily BEN78_10205 IPR005496 Integral membrane protein TerC BEN78_10210 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt BEN78_10215 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain BEN78_10215 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily BEN78_10215 IPR000398 Thymidylate synthase BEN78_10215 IPR020940 Thymidylate synthase, active site BEN78_10220 IPR001796 Dihydrofolate reductase domain BEN78_10220 IPR024072 Dihydrofolate reductase-like domain superfamily BEN78_10220 IPR017925 Dihydrofolate reductase conserved site BEN78_10220 IPR012259 Dihydrofolate reductase BEN78_10225 IPR009706 Protein of unknown function DUF1287 BEN78_10235 IPR007474 ApaG domain BEN78_10235 IPR036767 ApaG domain superfamily BEN78_10235 IPR023065 Uncharacterised protein family ApaG BEN78_10240 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal BEN78_10240 IPR011530 Ribosomal RNA adenine dimethylase BEN78_10240 IPR023165 rRNA adenine dimethylase-like BEN78_10240 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm BEN78_10240 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_10240 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site BEN78_10245 IPR002547 tRNA-binding domain BEN78_10245 IPR008231 Probable chaperone CsaA BEN78_10245 IPR012340 Nucleic acid-binding, OB-fold BEN78_10250 IPR005255 PdxA family BEN78_10250 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase BEN78_10255 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type BEN78_10255 IPR015391 SurA N-terminal BEN78_10255 IPR027304 Trigger factor/SurA domain superfamily BEN78_10255 IPR023034 Peptidyl-prolyl isomerase SurA BEN78_10260 IPR005653 Organic solvent tolerance-like, N-terminal BEN78_10260 IPR007543 LptD, C-terminal BEN78_10260 IPR020889 LPS-assembly protein LptD BEN78_10265 IPR000286 Histone deacetylase family BEN78_10265 IPR023801 Histone deacetylase domain BEN78_10265 IPR023696 Ureohydrolase domain superfamily BEN78_10265 IPR037138 Histone deacetylase domain superfamily BEN78_10270 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type BEN78_10270 IPR036451 Cobalamin adenosyltransferase-like superfamily BEN78_10270 IPR016030 Cobalamin adenosyltransferase-like BEN78_10280 IPR002938 FAD-binding domain BEN78_10280 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site BEN78_10280 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase BEN78_10280 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_10280 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 BEN78_10285 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_10285 IPR002938 FAD-binding domain BEN78_10285 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site BEN78_10285 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 BEN78_10295 IPR008526 Inner membrane protein YedI BEN78_10305 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_10305 IPR040739 RlmM ferredoxin-like domain BEN78_10305 IPR002877 Ribosomal RNA methyltransferase FtsJ domain BEN78_10305 IPR011224 Ribosomal RNA large subunit methyltransferase M BEN78_10325 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily BEN78_10325 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain BEN78_10325 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BEN78_10325 IPR000924 Glutamyl/glutaminyl-tRNA synthetase BEN78_10325 IPR022861 Glutamine-tRNA ligase, bacterial BEN78_10325 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain BEN78_10325 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_10325 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily BEN78_10325 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal BEN78_10330 IPR012292 Globin/Protoglobin BEN78_10330 IPR029787 Nucleotide cyclase BEN78_10330 IPR039435 Diguanylate cyclase DosC, globin sensor domain BEN78_10330 IPR000160 GGDEF domain BEN78_10330 IPR009050 Globin-like superfamily BEN78_10340 IPR002569 Peptide methionine sulphoxide reductase MsrA BEN78_10340 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily BEN78_10345 IPR000847 Transcription regulator HTH, LysR BEN78_10345 IPR036390 Winged helix DNA-binding domain superfamily BEN78_10345 IPR005119 LysR, substrate-binding BEN78_10345 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_10350 IPR023753 FAD/NAD(P)-binding domain BEN78_10350 IPR036249 Thioredoxin-like superfamily BEN78_10350 IPR012336 Thioredoxin-like fold BEN78_10350 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_10350 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site BEN78_10350 IPR012081 Alkyl hydroperoxide reductase subunit F BEN78_10350 IPR002109 Glutaredoxin BEN78_10355 IPR019479 Peroxiredoxin, C-terminal BEN78_10355 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant BEN78_10355 IPR013766 Thioredoxin domain BEN78_10355 IPR017559 Alkyl hydroperoxide reductase subunit C BEN78_10355 IPR024706 Peroxiredoxin, AhpC-type BEN78_10355 IPR036249 Thioredoxin-like superfamily BEN78_10365 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific BEN78_10365 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BEN78_10365 IPR004556 Methyltransferase HemK-like BEN78_10365 IPR040758 Release factor glutamine methyltransferase, N-terminal domain BEN78_10365 IPR007848 Methyltransferase small domain BEN78_10365 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_10370 IPR029058 Alpha/Beta hydrolase fold BEN78_10370 IPR000073 Alpha/beta hydrolase fold-1 BEN78_10370 IPR002410 Peptidase S33 BEN78_10370 IPR005944 Proline iminopeptidase BEN78_10375 IPR004624 PhnA protein BEN78_10375 IPR013988 PhnA protein, C-terminal BEN78_10375 IPR013987 PhnA protein, N-terminal BEN78_10380 IPR020084 NUDIX hydrolase, conserved site BEN78_10380 IPR004385 Nucleoside diphosphate pyrophosphatase BEN78_10380 IPR015797 NUDIX hydrolase-like domain superfamily BEN78_10380 IPR000086 NUDIX hydrolase domain BEN78_10385 IPR020045 DNA polymerase I-like, H3TH domain BEN78_10385 IPR019760 DNA-directed DNA polymerase, family A, conserved site BEN78_10385 IPR008918 Helix-hairpin-helix motif, class 2 BEN78_10385 IPR036279 5'-3' exonuclease, C-terminal domain superfamily BEN78_10385 IPR029060 PIN-like domain superfamily BEN78_10385 IPR002298 DNA polymerase A BEN78_10385 IPR012337 Ribonuclease H-like superfamily BEN78_10385 IPR001098 DNA-directed DNA polymerase, family A, palm domain BEN78_10385 IPR002421 5'-3' exonuclease, N-terminal BEN78_10385 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal BEN78_10385 IPR002562 3'-5' exonuclease domain BEN78_10385 IPR018320 DNA polymerase 1 BEN78_10385 IPR036397 Ribonuclease H superfamily BEN78_10390 IPR026021 Putative NAD(P)H nitroreductase YdjA-like BEN78_10390 IPR029479 Nitroreductase BEN78_10390 IPR000415 Nitroreductase-like BEN78_10410 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site BEN78_10410 IPR013325 RNA polymerase sigma factor, region 2 BEN78_10410 IPR014286 RNA polymerase sigma-70 RpoE type BEN78_10410 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 BEN78_10410 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN78_10410 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_10410 IPR007627 RNA polymerase sigma-70 region 2 BEN78_10410 IPR014284 RNA polymerase sigma-70 like domain BEN78_10410 IPR039425 RNA polymerase sigma-70 like BEN78_10415 IPR012136 NADP transhydrogenase, beta subunit BEN78_10415 IPR029035 DHS-like NAD/FAD-binding domain superfamily BEN78_10415 IPR034300 NADP transhydrogenase beta-like domain BEN78_10425 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal BEN78_10430 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 BEN78_10430 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal BEN78_10430 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain BEN78_10430 IPR036291 NAD(P)-binding domain superfamily BEN78_10430 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 BEN78_10440 IPR037424 Regulatory protein NocR, PBP2 domain BEN78_10440 IPR005119 LysR, substrate-binding BEN78_10440 IPR036390 Winged helix DNA-binding domain superfamily BEN78_10440 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_10440 IPR000847 Transcription regulator HTH, LysR BEN78_10465 IPR002744 MIP18 family-like BEN78_10465 IPR034904 Fe-S cluster assembly domain superfamily BEN78_10470 IPR023828 Peptidase S8, subtilisin, Ser-active site BEN78_10470 IPR022398 Peptidase S8, subtilisin, His-active site BEN78_10470 IPR023827 Peptidase S8, subtilisin, Asp-active site BEN78_10470 IPR036852 Peptidase S8/S53 domain superfamily BEN78_10470 IPR000209 Peptidase S8/S53 domain BEN78_10470 IPR007280 Peptidase, C-terminal, archaeal/bacterial BEN78_10470 IPR034176 Peptidase MprA-like catalytic domain BEN78_10470 IPR015500 Peptidase S8, subtilisin-related BEN78_10475 IPR017323 Lysyl endopeptidase BEN78_10475 IPR002884 P domain BEN78_10475 IPR009003 Peptidase S1, PA clan BEN78_10475 IPR022409 PKD/Chitinase domain BEN78_10475 IPR000601 PKD domain BEN78_10475 IPR013783 Immunoglobulin-like fold BEN78_10475 IPR035986 PKD domain superfamily BEN78_10475 IPR008979 Galactose-binding-like domain superfamily BEN78_10485 IPR027473 L-asparaginase, C-terminal BEN78_10485 IPR004550 L-asparaginase, type II BEN78_10485 IPR036152 Asparaginase/glutaminase-like superfamily BEN78_10485 IPR006034 Asparaginase/glutaminase-like BEN78_10485 IPR020827 Asparaginase/glutaminase, active site 1 BEN78_10485 IPR027475 Asparaginase/glutaminase, active site 2 BEN78_10485 IPR040919 Asparaginase/glutaminase, C-terminal BEN78_10485 IPR037152 L-asparaginase, N-terminal domain superfamily BEN78_10485 IPR027474 L-asparaginase, N-terminal BEN78_10495 IPR008254 Flavodoxin/nitric oxide synthase BEN78_10495 IPR001226 Flavodoxin, conserved site BEN78_10495 IPR029039 Flavoprotein-like superfamily BEN78_10495 IPR010089 Flavoprotein WrbA-like BEN78_10495 IPR005025 NADPH-dependent FMN reductase-like BEN78_10500 IPR023679 Uncharacterised protein family UPF0761, bacterial BEN78_10500 IPR017039 Virulence factor BrkB BEN78_10505 IPR013766 Thioredoxin domain BEN78_10505 IPR017937 Thioredoxin, conserved site BEN78_10505 IPR036249 Thioredoxin-like superfamily BEN78_10505 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE BEN78_10505 IPR013740 Redoxin BEN78_10515 IPR023353 LemA-like domain superfamily BEN78_10515 IPR007156 LemA BEN78_10520 IPR022919 Peptidase M48, protease HtpX, putative BEN78_10520 IPR001915 Peptidase M48 BEN78_10525 IPR012132 Glucose-methanol-choline oxidoreductase BEN78_10525 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal BEN78_10525 IPR027424 Glucose Oxidase, domain 2 BEN78_10525 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_10525 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal BEN78_10540 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal BEN78_10540 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal BEN78_10540 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily BEN78_10540 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type BEN78_10540 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal BEN78_10540 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain BEN78_10540 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily BEN78_10545 IPR009057 Homeobox-like domain superfamily BEN78_10545 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BEN78_10545 IPR001647 DNA-binding HTH domain, TetR-type BEN78_10560 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily BEN78_10560 IPR000397 Heat shock protein Hsp33 BEN78_10560 IPR016154 Heat shock protein Hsp33, C-terminal BEN78_10560 IPR016153 Heat shock protein Hsp33, N-terminal BEN78_10565 IPR011812 Biosynthetic peptidoglycan transglycosylase BEN78_10565 IPR001264 Glycosyl transferase, family 51 BEN78_10565 IPR023346 Lysozyme-like domain superfamily BEN78_10565 IPR036950 Penicillin binding protein transglycosylase domain BEN78_10570 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_10570 IPR001173 Glycosyltransferase 2-like BEN78_10580 IPR005744 Hly-III BEN78_10580 IPR004254 AdipoR/Haemolysin-III-related BEN78_10585 IPR032090 Peptide chain release factor 3, C-terminal BEN78_10585 IPR035647 EF-G domain III/V-like BEN78_10585 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily BEN78_10585 IPR005225 Small GTP-binding protein domain BEN78_10585 IPR004548 Peptide chain release factor 3 BEN78_10585 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_10585 IPR000795 Transcription factor, GTP-binding domain BEN78_10585 IPR009000 Translation protein, beta-barrel domain superfamily BEN78_10585 IPR031157 Tr-type G domain, conserved site BEN78_10585 IPR041732 Peptide chain release factor 3, GTP-binding domain BEN78_10590 IPR016047 Peptidase M23 BEN78_10590 IPR011055 Duplicated hybrid motif BEN78_10590 IPR018392 LysM domain BEN78_10590 IPR013731 Opacity-associated protein A, N-terminal BEN78_10595 IPR008220 Homoserine/serine acetyltransferase MetX-like BEN78_10595 IPR000073 Alpha/beta hydrolase fold-1 BEN78_10595 IPR029058 Alpha/Beta hydrolase fold BEN78_10600 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_10600 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BEN78_10600 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme BEN78_10600 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BEN78_10600 IPR011821 O-succinylhomoserine (thiol)-lyase BEN78_10605 IPR036291 NAD(P)-binding domain superfamily BEN78_10605 IPR001342 Homoserine dehydrogenase, catalytic BEN78_10605 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I BEN78_10605 IPR018042 Aspartate kinase, conserved site BEN78_10605 IPR001341 Aspartate kinase BEN78_10605 IPR001048 Aspartate/glutamate/uridylate kinase BEN78_10605 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain BEN78_10605 IPR036393 Acetylglutamate kinase-like superfamily BEN78_10605 IPR019811 Homoserine dehydrogenase, conserved site BEN78_10605 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding BEN78_10615 IPR022907 VapC family BEN78_10615 IPR029060 PIN-like domain superfamily BEN78_10615 IPR002716 PIN domain BEN78_10625 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form BEN78_10625 IPR005130 Serine dehydratase-like, alpha subunit BEN78_10625 IPR029009 Allosteric substrate binding domain superfamily BEN78_10625 IPR005131 Serine dehydratase beta chain BEN78_10645 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_10645 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_10645 IPR005467 Histidine kinase domain BEN78_10645 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BEN78_10645 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BEN78_10645 IPR036641 HPT domain superfamily BEN78_10645 IPR003660 HAMP domain BEN78_10645 IPR011006 CheY-like superfamily BEN78_10645 IPR001789 Signal transduction response regulator, receiver domain BEN78_10645 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain BEN78_10645 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BEN78_10645 IPR033414 Periplasmic sensor domain BEN78_10650 IPR012308 DNA ligase, ATP-dependent, N-terminal BEN78_10650 IPR036599 DNA ligase, ATP-dependent, N-terminal domain superfamily BEN78_10650 IPR012340 Nucleic acid-binding, OB-fold BEN78_10650 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN78_10650 IPR012309 DNA ligase, ATP-dependent, C-terminal BEN78_10650 IPR012310 DNA ligase, ATP-dependent, central BEN78_10650 IPR016059 DNA ligase, ATP-dependent, conserved site BEN78_10650 IPR000977 DNA ligase, ATP-dependent BEN78_10655 IPR000977 DNA ligase, ATP-dependent BEN78_10655 IPR012309 DNA ligase, ATP-dependent, C-terminal BEN78_10655 IPR012310 DNA ligase, ATP-dependent, central BEN78_10655 IPR016059 DNA ligase, ATP-dependent, conserved site BEN78_10655 IPR036599 DNA ligase, ATP-dependent, N-terminal domain superfamily BEN78_10655 IPR012340 Nucleic acid-binding, OB-fold BEN78_10655 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN78_10655 IPR012308 DNA ligase, ATP-dependent, N-terminal BEN78_10660 IPR003593 AAA+ ATPase domain BEN78_10660 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_10660 IPR001650 Helicase, C-terminal BEN78_10660 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN78_10660 IPR011545 DEAD/DEAH box helicase domain BEN78_10660 IPR013701 DEAD/H associated BEN78_10680 IPR008824 RuvB-like P-loop domain BEN78_10680 IPR008823 RuvB C-terminal winged helix domain BEN78_10680 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_10680 IPR036390 Winged helix DNA-binding domain superfamily BEN78_10680 IPR003593 AAA+ ATPase domain BEN78_10680 IPR041445 RuvB, AAA lid domain BEN78_10680 IPR000641 CbxX/CfxQ BEN78_10680 IPR004605 DNA helicase, Holliday junction RuvB-type BEN78_10680 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_10690 IPR008863 Toxic anion resistance BEN78_10695 IPR006361 Uroporphyrinogen decarboxylase HemE BEN78_10695 IPR000257 Uroporphyrinogen decarboxylase (URO-D) BEN78_10695 IPR038071 UROD/MetE-like superfamily BEN78_10705 IPR030960 3-dehydroquinate synthase domain BEN78_10705 IPR016037 3-dehydroquinate synthase AroB BEN78_10705 IPR030963 3-dehydroquinate synthase family BEN78_10710 IPR031322 Shikimate kinase/gluconokinase BEN78_10710 IPR000623 Shikimate kinase/Threonine synthase-like 1 BEN78_10710 IPR023000 Shikimate kinase, conserved site BEN78_10710 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_10720 IPR012349 FMN-binding split barrel BEN78_10720 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal BEN78_10720 IPR000659 Pyridoxamine 5'-phosphate oxidase BEN78_10720 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative BEN78_10720 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site BEN78_10725 IPR036291 NAD(P)-binding domain superfamily BEN78_10725 IPR016040 NAD(P)-binding domain BEN78_10735 IPR036291 NAD(P)-binding domain superfamily BEN78_10735 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain BEN78_10735 IPR000304 Pyrroline-5-carboxylate reductase BEN78_10735 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BEN78_10735 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal BEN78_10740 IPR003593 AAA+ ATPase domain BEN78_10740 IPR001482 Type II/IV secretion system protein BEN78_10740 IPR006321 Pilus retraction protein PilT BEN78_10740 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_10745 IPR001482 Type II/IV secretion system protein BEN78_10745 IPR006321 Pilus retraction protein PilT BEN78_10745 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_10745 IPR003593 AAA+ ATPase domain BEN78_10750 IPR001915 Peptidase M48 BEN78_10755 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily BEN78_10755 IPR019831 Manganese/iron superoxide dismutase, N-terminal BEN78_10755 IPR019832 Manganese/iron superoxide dismutase, C-terminal BEN78_10755 IPR019833 Manganese/iron superoxide dismutase, binding site BEN78_10755 IPR001189 Manganese/iron superoxide dismutase BEN78_10755 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily BEN78_10765 IPR011257 DNA glycosylase BEN78_10765 IPR017926 Glutamine amidotransferase BEN78_10765 IPR001674 GMP synthase, C-terminal BEN78_10765 IPR016181 Acyl-CoA N-acyltransferase BEN78_10765 IPR005019 Methyladenine glycosylase BEN78_10765 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_10765 IPR000182 GNAT domain BEN78_10765 IPR029062 Class I glutamine amidotransferase-like BEN78_10765 IPR025777 GMP synthetase ATP pyrophosphatase domain BEN78_10770 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BEN78_10780 IPR003774 Protein of unknown function UPF0301 BEN78_10785 IPR012337 Ribonuclease H-like superfamily BEN78_10785 IPR005227 Putative pre-16S rRNA nuclease BEN78_10785 IPR006641 YqgF/RNase H-like domain BEN78_10785 IPR037027 YqgF/RNase H-like domain superfamily BEN78_10790 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding BEN78_10790 IPR006130 Aspartate/ornithine carbamoyltransferase BEN78_10790 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily BEN78_10790 IPR002082 Aspartate carbamoyltransferase BEN78_10790 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain BEN78_10795 IPR004840 Amino acid permease, conserved site BEN78_10795 IPR004841 Amino acid permease/ SLC12A domain BEN78_10810 IPR006668 Magnesium transporter, MgtE intracellular domain BEN78_10810 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily BEN78_10810 IPR006667 SLC41 divalent cation transporters, integral membrane domain BEN78_10810 IPR006669 Magnesium transporter MgtE BEN78_10810 IPR038048 Magnesium transporter MgtE, transmembrane domain BEN78_10810 IPR038076 MgtE, N-terminal domain superfamily BEN78_10810 IPR000644 CBS domain BEN78_10815 IPR000121 PEP-utilising enzyme, C-terminal BEN78_10815 IPR023151 PEP-utilising enzyme, conserved site BEN78_10815 IPR018274 PEP-utilising enzyme, active site BEN78_10815 IPR008279 PEP-utilising enzyme, mobile domain BEN78_10815 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BEN78_10815 IPR024692 Phosphotransferase system, enzyme I BEN78_10815 IPR006318 Phosphotransferase system, enzyme I-like BEN78_10815 IPR008731 Phosphotransferase system, enzyme I N-terminal BEN78_10815 IPR036618 PtsI, HPr-binding domain superfamily BEN78_10815 IPR040442 Pyruvate kinase-like domain superfamily BEN78_10815 IPR036637 Phosphohistidine domain superfamily BEN78_10820 IPR002114 Phosphotransferase system, HPr serine phosphorylation site BEN78_10820 IPR035895 HPr-like superfamily BEN78_10820 IPR000032 Phosphocarrier protein HPr-like BEN78_10820 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site BEN78_10830 IPR005337 RapZ-like family BEN78_10830 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_10835 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal BEN78_10835 IPR011104 HPr kinase/phosphorylase, C-terminal BEN78_10835 IPR003755 HPr(Ser) kinase/phosphorylase BEN78_10835 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily BEN78_10840 IPR016152 Phosphotransferase/anion transporter BEN78_10840 IPR002178 PTS EIIA type-2 domain BEN78_10840 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN BEN78_10845 IPR036567 Ribosome hibernation promotion factor-like BEN78_10845 IPR003489 Ribosome hibernation promoting factor/RaiA BEN78_10855 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal BEN78_10855 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_10855 IPR003439 ABC transporter-like BEN78_10855 IPR003593 AAA+ ATPase domain BEN78_10855 IPR030921 LPS export ABC transporter, ATP-binding protein LptB BEN78_10855 IPR017871 ABC transporter, conserved site BEN78_10870 IPR023214 HAD superfamily BEN78_10870 IPR036412 HAD-like superfamily BEN78_10870 IPR010023 KdsC family BEN78_10875 IPR000644 CBS domain BEN78_10875 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type BEN78_10875 IPR001347 Sugar isomerase (SIS) BEN78_10875 IPR035474 KpsF-like, SIS domain BEN78_10880 IPR036065 BolA-like superfamily BEN78_10880 IPR002634 BolA protein BEN78_10885 IPR036968 Enolpyruvate transferase domain superfamily BEN78_10885 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta BEN78_10885 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase BEN78_10885 IPR001986 Enolpyruvate transferase domain BEN78_10905 IPR001555 Phosphoribosylglycinamide formyltransferase, active site BEN78_10905 IPR004607 Phosphoribosylglycinamide formyltransferase BEN78_10905 IPR036477 Formyl transferase, N-terminal domain superfamily BEN78_10905 IPR002376 Formyl transferase, N-terminal BEN78_10915 IPR010918 PurM-like, C-terminal domain BEN78_10915 IPR036676 PurM-like, C-terminal domain superfamily BEN78_10915 IPR016188 PurM-like, N-terminal domain BEN78_10915 IPR036921 PurM-like, N-terminal domain superfamily BEN78_10915 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase BEN78_10925 IPR002549 Transmembrane protein TqsA-like BEN78_10930 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae BEN78_10930 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_10930 IPR020591 Chromosomal replication control, initiator DnaA-like BEN78_10930 IPR013317 Chromosomal replication initiator protein DnaA BEN78_10930 IPR017788 DnaA regulatory inactivator Hda BEN78_10935 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria BEN78_10935 IPR001453 MoaB/Mog domain BEN78_10935 IPR012245 Molybdenum cofactor biosynthesis protein MoaB BEN78_10935 IPR008284 Molybdenum cofactor biosynthesis, conserved site BEN78_10935 IPR036425 MoaB/Mog-like domain superfamily BEN78_10940 IPR004373 Peptide chain release factor 1 BEN78_10940 IPR000352 Peptide chain release factor class I BEN78_10940 IPR005139 Peptide chain release factor BEN78_10945 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase BEN78_10945 IPR036291 NAD(P)-binding domain superfamily BEN78_10945 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily BEN78_10945 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily BEN78_10945 IPR018214 Glutamyl-tRNA reductase, conserved site BEN78_10945 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal BEN78_10945 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain BEN78_10945 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase BEN78_10950 IPR013026 Tetratricopeptide repeat-containing domain BEN78_10950 IPR011990 Tetratricopeptide-like helical domain superfamily BEN78_10950 IPR019734 Tetratricopeptide repeat BEN78_10955 IPR004565 Outer membrane lipoprotein LolB BEN78_10955 IPR029046 Lipoprotein localisation LolA/LolB/LppX BEN78_10960 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase BEN78_10960 IPR036554 GHMP kinase, C-terminal domain superfamily BEN78_10960 IPR013750 GHMP kinase, C-terminal domain BEN78_10960 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BEN78_10960 IPR020568 Ribosomal protein S5 domain 2-type fold BEN78_10960 IPR006204 GHMP kinase N-terminal domain BEN78_10970 IPR029057 Phosphoribosyltransferase-like BEN78_10970 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site BEN78_10970 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain BEN78_10970 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type BEN78_10970 IPR005946 Ribose-phosphate pyrophosphokinase BEN78_10970 IPR000836 Phosphoribosyltransferase domain BEN78_10975 IPR020055 Ribosomal protein L25, short-form BEN78_10975 IPR029751 Ribosomal protein L25 BEN78_10975 IPR001021 Ribosomal protein L25, long-form BEN78_10975 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily BEN78_10975 IPR037121 Ribosomal protein L25, C-terminal BEN78_10975 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal BEN78_10975 IPR020057 Ribosomal protein L25, beta domain BEN78_10980 IPR001328 Peptidyl-tRNA hydrolase BEN78_10980 IPR018171 Peptidyl-tRNA hydrolase, conserved site BEN78_10980 IPR036416 Peptidyl-tRNA hydrolase superfamily BEN78_10985 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_10985 IPR006073 GTP binding domain BEN78_10985 IPR004095 TGS BEN78_10985 IPR012676 TGS-like BEN78_10985 IPR031167 OBG-type guanine nucleotide-binding (G) domain BEN78_10985 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 BEN78_10985 IPR013029 YchF, C-terminal domain BEN78_10985 IPR023192 TGS-like domain superfamily BEN78_10985 IPR041706 YchF, N-terminal BEN78_10985 IPR012675 Beta-grasp domain superfamily BEN78_10990 IPR029055 Nucleophile aminohydrolases, N-terminal BEN78_10990 IPR000246 Peptidase T2, asparaginase 2 BEN78_11010 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal BEN78_11010 IPR033720 Elongation factor Tu, domain 2 BEN78_11010 IPR031157 Tr-type G domain, conserved site BEN78_11010 IPR004161 Translation elongation factor EFTu-like, domain 2 BEN78_11010 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_11010 IPR005225 Small GTP-binding protein domain BEN78_11010 IPR000795 Transcription factor, GTP-binding domain BEN78_11010 IPR009000 Translation protein, beta-barrel domain superfamily BEN78_11010 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain BEN78_11010 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle BEN78_11010 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal BEN78_11020 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit BEN78_11020 IPR005807 SecE subunit of protein translocation complex, bacterial-like BEN78_11020 IPR038379 SecE superfamily BEN78_11025 IPR006645 NusG, N-terminal BEN78_11025 IPR036735 NusG, N-terminal domain superfamily BEN78_11025 IPR001062 Transcription antitermination protein, NusG BEN78_11025 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site BEN78_11025 IPR008991 Translation protein SH3-like domain superfamily BEN78_11025 IPR005824 KOW BEN78_11025 IPR014722 Ribosomal protein L2, domain 2 BEN78_11030 IPR020783 Ribosomal protein L11, C-terminal BEN78_11030 IPR020784 Ribosomal protein L11, N-terminal BEN78_11030 IPR020785 Ribosomal protein L11, conserved site BEN78_11030 IPR036769 Ribosomal protein L11, C-terminal domain superfamily BEN78_11030 IPR000911 Ribosomal protein L11/L12 BEN78_11030 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily BEN78_11030 IPR006519 Ribosomal protein L11, bacterial-type BEN78_11035 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein BEN78_11035 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich BEN78_11035 IPR023673 Ribosomal protein L1, conserved site BEN78_11035 IPR002143 Ribosomal protein L1 BEN78_11035 IPR005878 Ribosomal protein L1, bacterial-type BEN78_11035 IPR023674 Ribosomal protein L1-like BEN78_11040 IPR022973 Ribosomal protein L10 BEN78_11040 IPR001790 Ribosomal protein L10P BEN78_11045 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like BEN78_11045 IPR000206 Ribosomal protein L7/L12 BEN78_11045 IPR008932 Ribosomal protein L7/L12, oligomerisation BEN78_11045 IPR013823 Ribosomal protein L7/L12, C-terminal BEN78_11045 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily BEN78_11050 IPR015712 DNA-directed RNA polymerase, subunit 2 BEN78_11050 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain BEN78_11050 IPR014724 RNA polymerase Rpb2, OB-fold BEN78_11050 IPR007645 RNA polymerase Rpb2, domain 3 BEN78_11050 IPR007641 RNA polymerase Rpb2, domain 7 BEN78_11050 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain BEN78_11050 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type BEN78_11050 IPR007644 RNA polymerase, beta subunit, protrusion BEN78_11050 IPR007642 RNA polymerase Rpb2, domain 2 BEN78_11050 IPR037034 RNA polymerase Rpb2, domain 2 superfamily BEN78_11050 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily BEN78_11050 IPR007121 RNA polymerase, beta subunit, conserved site BEN78_11055 IPR038120 RNA polymerase Rpb1, funnel domain superfamily BEN78_11055 IPR012754 DNA-directed RNA polymerase, subunit beta-prime BEN78_11055 IPR007080 RNA polymerase Rpb1, domain 1 BEN78_11055 IPR007081 RNA polymerase Rpb1, domain 5 BEN78_11055 IPR007083 RNA polymerase Rpb1, domain 4 BEN78_11055 IPR000722 RNA polymerase, alpha subunit BEN78_11055 IPR042102 RNA polymerase Rpb1, domain 3 superfamily BEN78_11055 IPR007066 RNA polymerase Rpb1, domain 3 BEN78_11055 IPR006592 RNA polymerase, N-terminal BEN78_11060 IPR005679 Ribosomal protein S12, bacterial-type BEN78_11060 IPR006032 Ribosomal protein S12/S23 BEN78_11060 IPR012340 Nucleic acid-binding, OB-fold BEN78_11065 IPR000235 Ribosomal protein S5/S7 BEN78_11065 IPR005717 Ribosomal protein S7, bacterial/organellar-type BEN78_11065 IPR020606 Ribosomal protein S7, conserved site BEN78_11065 IPR023798 Ribosomal protein S7 domain BEN78_11065 IPR036823 Ribosomal protein S7 domain superfamily BEN78_11070 IPR004161 Translation elongation factor EFTu-like, domain 2 BEN78_11070 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_11070 IPR035647 EF-G domain III/V-like BEN78_11070 IPR035649 EFG, domain V BEN78_11070 IPR031157 Tr-type G domain, conserved site BEN78_11070 IPR009022 Elongation factor G, domain III BEN78_11070 IPR005225 Small GTP-binding protein domain BEN78_11070 IPR000795 Transcription factor, GTP-binding domain BEN78_11070 IPR041095 Elongation Factor G, domain II BEN78_11070 IPR020568 Ribosomal protein S5 domain 2-type fold BEN78_11070 IPR009000 Translation protein, beta-barrel domain superfamily BEN78_11070 IPR000640 Elongation factor EFG, domain V-like BEN78_11070 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BEN78_11070 IPR005517 Translation elongation factor EFG/EF2, domain IV BEN78_11070 IPR004540 Translation elongation factor EFG/EF2 BEN78_11075 IPR031157 Tr-type G domain, conserved site BEN78_11075 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal BEN78_11075 IPR009000 Translation protein, beta-barrel domain superfamily BEN78_11075 IPR000795 Transcription factor, GTP-binding domain BEN78_11075 IPR005225 Small GTP-binding protein domain BEN78_11075 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_11075 IPR033720 Elongation factor Tu, domain 2 BEN78_11075 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle BEN78_11075 IPR004161 Translation elongation factor EFTu-like, domain 2 BEN78_11075 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain BEN78_11075 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal BEN78_11080 IPR036838 Ribosomal protein S10 domain superfamily BEN78_11080 IPR027486 Ribosomal protein S10 domain BEN78_11080 IPR018268 Ribosomal protein S10, conserved site BEN78_11080 IPR001848 Ribosomal protein S10 BEN78_11085 IPR019927 Ribosomal protein L3, bacterial/organelle-type BEN78_11085 IPR009000 Translation protein, beta-barrel domain superfamily BEN78_11085 IPR019926 Ribosomal protein L3, conserved site BEN78_11085 IPR000597 Ribosomal protein L3 BEN78_11090 IPR023574 Ribosomal protein L4 domain superfamily BEN78_11090 IPR002136 Ribosomal protein L4/L1e BEN78_11090 IPR013005 50S ribosomal protein uL4 BEN78_11095 IPR012678 Ribosomal protein L23/L15e core domain superfamily BEN78_11095 IPR001014 Ribosomal protein L23/L25, conserved site BEN78_11095 IPR013025 Ribosomal protein L25/L23 BEN78_11095 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily BEN78_11100 IPR022669 Ribosomal protein L2, C-terminal BEN78_11100 IPR014726 Ribosomal protein L2, domain 3 BEN78_11100 IPR022671 Ribosomal protein L2, conserved site BEN78_11100 IPR002171 Ribosomal protein L2 BEN78_11100 IPR014722 Ribosomal protein L2, domain 2 BEN78_11100 IPR022666 Ribosomal Proteins L2, RNA binding domain BEN78_11100 IPR012340 Nucleic acid-binding, OB-fold BEN78_11100 IPR005880 Ribosomal protein L2, bacterial/organellar-type BEN78_11100 IPR008991 Translation protein SH3-like domain superfamily BEN78_11105 IPR023575 Ribosomal protein S19, superfamily BEN78_11105 IPR020934 Ribosomal protein S19 conserved site BEN78_11105 IPR005732 Ribosomal protein S19, bacterial-type BEN78_11105 IPR002222 Ribosomal protein S19/S15 BEN78_11110 IPR001063 Ribosomal protein L22/L17 BEN78_11110 IPR018260 Ribosomal protein L22/L17, conserved site BEN78_11110 IPR036394 Ribosomal protein L22/L17 superfamily BEN78_11110 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type BEN78_11115 IPR001351 Ribosomal protein S3, C-terminal BEN78_11115 IPR005704 Ribosomal protein S3, bacterial-type BEN78_11115 IPR018280 Ribosomal protein S3, conserved site BEN78_11115 IPR004087 K Homology domain BEN78_11115 IPR009019 K homology domain superfamily, prokaryotic type BEN78_11115 IPR004044 K Homology domain, type 2 BEN78_11115 IPR036419 Ribosomal protein S3, C-terminal domain superfamily BEN78_11115 IPR015946 K homology domain-like, alpha/beta BEN78_11120 IPR036920 Ribosomal protein L10e/L16 superfamily BEN78_11120 IPR016180 Ribosomal protein L10e/L16 BEN78_11120 IPR020798 Ribosomal protein L16, conserved site BEN78_11120 IPR000114 Ribosomal protein L16 BEN78_11125 IPR018254 Ribosomal protein L29, conserved site BEN78_11125 IPR036049 Ribosomal protein L29/L35 superfamily BEN78_11125 IPR001854 Ribosomal protein L29/L35 BEN78_11130 IPR000266 Ribosomal protein S17/S11 BEN78_11130 IPR019984 30S ribosomal protein S17 BEN78_11130 IPR012340 Nucleic acid-binding, OB-fold BEN78_11135 IPR005745 Ribosomal protein L14P, bacterial-type BEN78_11135 IPR000218 Ribosomal protein L14P BEN78_11135 IPR036853 Ribosomal protein L14 superfamily BEN78_11135 IPR019972 Ribosomal protein L14P, conserved site BEN78_11140 IPR041988 Ribosomal Protein L26/L24, KOW domain BEN78_11140 IPR005824 KOW BEN78_11140 IPR014722 Ribosomal protein L2, domain 2 BEN78_11140 IPR003256 Ribosomal protein L24 BEN78_11140 IPR008991 Translation protein SH3-like domain superfamily BEN78_11145 IPR022803 Ribosomal protein L5 domain superfamily BEN78_11145 IPR002132 Ribosomal protein L5 BEN78_11145 IPR020930 Ribosomal protein L5, bacterial-type BEN78_11145 IPR031309 Ribosomal protein L5, C-terminal BEN78_11145 IPR020929 Ribosomal protein L5, conserved site BEN78_11145 IPR031310 Ribosomal protein L5, N-terminal BEN78_11150 IPR001209 Ribosomal protein S14 BEN78_11150 IPR023036 Ribosomal protein S14, bacterial/plastid BEN78_11155 IPR035987 Ribosomal protein S8 superfamily BEN78_11155 IPR000630 Ribosomal protein S8 BEN78_11160 IPR002358 Ribosomal protein L6, conserved site BEN78_11160 IPR000702 Ribosomal protein L6 BEN78_11160 IPR020040 Ribosomal protein L6, alpha-beta domain BEN78_11160 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily BEN78_11160 IPR019906 Ribosomal protein L6, bacterial-type BEN78_11165 IPR005484 Ribosomal protein L18 BEN78_11165 IPR004389 Ribosomal protein L18, bacterial-type BEN78_11170 IPR000851 Ribosomal protein S5 BEN78_11170 IPR018192 Ribosomal protein S5, N-terminal, conserved site BEN78_11170 IPR005712 Ribosomal protein S5, bacterial-type BEN78_11170 IPR013810 Ribosomal protein S5, N-terminal BEN78_11170 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BEN78_11170 IPR020568 Ribosomal protein S5 domain 2-type fold BEN78_11170 IPR005324 Ribosomal protein S5, C-terminal BEN78_11175 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily BEN78_11175 IPR005996 Ribosomal protein L30, bacterial-type BEN78_11175 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain BEN78_11180 IPR005749 Ribosomal protein L15, bacterial-type BEN78_11180 IPR030878 Ribosomal protein L15 BEN78_11180 IPR036227 Ribosomal L18e/L15P superfamily BEN78_11180 IPR001196 Ribosomal protein L15, conserved site BEN78_11180 IPR021131 Ribosomal protein L18e/L15P BEN78_11190 IPR010979 Ribosomal protein S13-like, H2TH BEN78_11190 IPR018269 Ribosomal protein S13, conserved site BEN78_11190 IPR019980 Ribosomal protein S13, bacterial-type BEN78_11190 IPR027437 30s ribosomal protein S13, C-terminal BEN78_11190 IPR001892 Ribosomal protein S13 BEN78_11195 IPR018102 Ribosomal S11, conserved site BEN78_11195 IPR019981 Ribosomal protein S11, bacterial-type BEN78_11195 IPR001971 Ribosomal protein S11 BEN78_11195 IPR036967 Ribosomal protein S11 superfamily BEN78_11200 IPR005709 Ribosomal protein S4, bacterial-type BEN78_11200 IPR022801 Ribosomal protein S4/S9 BEN78_11200 IPR018079 Ribosomal protein S4, conserved site BEN78_11200 IPR002942 RNA-binding S4 domain BEN78_11200 IPR036986 RNA-binding S4 domain superfamily BEN78_11200 IPR001912 Ribosomal protein S4/S9, N-terminal BEN78_11205 IPR011260 RNA polymerase, alpha subunit, C-terminal BEN78_11205 IPR036643 DNA-directed RNA polymerase, insert domain superfamily BEN78_11205 IPR011262 DNA-directed RNA polymerase, insert domain BEN78_11205 IPR036603 RNA polymerase, RBP11-like subunit BEN78_11205 IPR011773 DNA-directed RNA polymerase, alpha subunit BEN78_11205 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type BEN78_11210 IPR036373 Ribosomal protein L17 superfamily BEN78_11210 IPR000456 Ribosomal protein L17 BEN78_11215 IPR022920 Disulphide bond formation protein DsbB BEN78_11215 IPR023380 DsbB-like superfamily BEN78_11215 IPR003752 Disulphide bond formation protein DsbB/BdbC BEN78_11220 IPR013785 Aldolase-type TIM barrel BEN78_11220 IPR002480 DAHP synthetase, class II BEN78_11240 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site BEN78_11240 IPR029000 Cyclophilin-like domain superfamily BEN78_11240 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain BEN78_11255 IPR036291 NAD(P)-binding domain superfamily BEN78_11255 IPR010945 Malate dehydrogenase, type 2 BEN78_11255 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal BEN78_11255 IPR001236 Lactate/malate dehydrogenase, N-terminal BEN78_11255 IPR001557 L-lactate/malate dehydrogenase BEN78_11255 IPR022383 Lactate/malate dehydrogenase, C-terminal BEN78_11260 IPR020845 AMP-binding, conserved site BEN78_11260 IPR000873 AMP-dependent synthetase/ligase BEN78_11260 IPR012694 Propionate--CoA ligase BEN78_11260 IPR042099 AMP-dependent synthetase-like superfamily BEN78_11260 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain BEN78_11260 IPR025110 AMP-binding enzyme, C-terminal domain BEN78_11265 IPR036969 Citrate synthase superfamily BEN78_11265 IPR024176 Citrate synthase, bacterial-type BEN78_11265 IPR019810 Citrate synthase active site BEN78_11265 IPR002020 Citrate synthase BEN78_11265 IPR016143 Citrate synthase-like, small alpha subdomain BEN78_11265 IPR016142 Citrate synthase-like, large alpha subdomain BEN78_11265 IPR011278 2-methylcitrate synthase/citrate synthase type I BEN78_11270 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site BEN78_11270 IPR039556 ICL/PEPM domain BEN78_11270 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BEN78_11270 IPR012695 2-methylisocitrate lyase BEN78_11270 IPR040442 Pyruvate kinase-like domain superfamily BEN78_11275 IPR016142 Citrate synthase-like, large alpha subdomain BEN78_11275 IPR019810 Citrate synthase active site BEN78_11275 IPR024176 Citrate synthase, bacterial-type BEN78_11275 IPR036969 Citrate synthase superfamily BEN78_11275 IPR016143 Citrate synthase-like, small alpha subdomain BEN78_11275 IPR002020 Citrate synthase BEN78_11275 IPR011278 2-methylcitrate synthase/citrate synthase type I BEN78_11280 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain BEN78_11280 IPR006249 Aconitase/Iron-responsive element-binding protein 2 BEN78_11280 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain BEN78_11280 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel BEN78_11280 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 BEN78_11280 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent BEN78_11280 IPR036008 Aconitase, iron-sulfur domain BEN78_11290 IPR012709 2-methyl-aconitate isomerase PrpF BEN78_11290 IPR007400 PrpF protein BEN78_11295 IPR004046 Glutathione S-transferase, C-terminal BEN78_11295 IPR036249 Thioredoxin-like superfamily BEN78_11295 IPR040079 Glutathione Transferase family BEN78_11295 IPR004045 Glutathione S-transferase, N-terminal BEN78_11295 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BEN78_11295 IPR010987 Glutathione S-transferase, C-terminal-like BEN78_11305 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal BEN78_11305 IPR023753 FAD/NAD(P)-binding domain BEN78_11305 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_11305 IPR013785 Aldolase-type TIM barrel BEN78_11310 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 BEN78_11310 IPR011032 GroES-like superfamily BEN78_11310 IPR036291 NAD(P)-binding domain superfamily BEN78_11310 IPR020843 Polyketide synthase, enoylreductase domain BEN78_11310 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site BEN78_11310 IPR013154 Alcohol dehydrogenase, N-terminal BEN78_11310 IPR013149 Alcohol dehydrogenase, C-terminal BEN78_11315 IPR020471 Aldo/keto reductase BEN78_11315 IPR023210 NADP-dependent oxidoreductase domain BEN78_11315 IPR036812 NADP-dependent oxidoreductase domain superfamily BEN78_11325 IPR005119 LysR, substrate-binding BEN78_11325 IPR000847 Transcription regulator HTH, LysR BEN78_11325 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_11325 IPR036390 Winged helix DNA-binding domain superfamily BEN78_11330 IPR006665 OmpA-like domain BEN78_11330 IPR036408 Photosystem I PsaA/PsaB superfamily BEN78_11330 IPR006664 Outer membrane protein, bacterial BEN78_11330 IPR006244 Photosystem I PsaB BEN78_11330 IPR036737 OmpA-like domain superfamily BEN78_11330 IPR001280 Photosystem I PsaA/PsaB BEN78_11330 IPR020586 Photosystem I PsaA/PsaB, conserved site BEN78_11340 IPR020103 Pseudouridine synthase, catalytic domain superfamily BEN78_11340 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain BEN78_11340 IPR006145 Pseudouridine synthase, RsuA/RluA BEN78_11340 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F BEN78_11340 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site BEN78_11340 IPR002942 RNA-binding S4 domain BEN78_11340 IPR036986 RNA-binding S4 domain superfamily BEN78_11345 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_11345 IPR004839 Aminotransferase, class I/classII BEN78_11345 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site BEN78_11345 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase BEN78_11345 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BEN78_11345 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BEN78_11355 IPR013154 Alcohol dehydrogenase, N-terminal BEN78_11355 IPR004627 L-threonine 3-dehydrogenase BEN78_11355 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site BEN78_11355 IPR020843 Polyketide synthase, enoylreductase domain BEN78_11355 IPR036291 NAD(P)-binding domain superfamily BEN78_11355 IPR011032 GroES-like superfamily BEN78_11355 IPR013149 Alcohol dehydrogenase, C-terminal BEN78_11360 IPR009003 Peptidase S1, PA clan BEN78_11360 IPR019500 Peptidase S46 BEN78_11370 IPR005952 Phosphoglycerate mutase 1 BEN78_11370 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site BEN78_11370 IPR013078 Histidine phosphatase superfamily, clade-1 BEN78_11370 IPR029033 Histidine phosphatase superfamily BEN78_11375 IPR018109 Folylpolyglutamate synthetase, conserved site BEN78_11375 IPR001645 Folylpolyglutamate synthetase BEN78_11375 IPR036565 Mur-like, catalytic domain superfamily BEN78_11375 IPR004101 Mur ligase, C-terminal BEN78_11375 IPR036615 Mur ligase, C-terminal domain superfamily BEN78_11375 IPR013221 Mur ligase, central BEN78_11385 IPR005854 Amidophosphoribosyltransferase BEN78_11385 IPR029057 Phosphoribosyltransferase-like BEN78_11385 IPR035584 Amidophosphoribosyltransferase, N-terminal BEN78_11385 IPR029055 Nucleophile aminohydrolases, N-terminal BEN78_11385 IPR017932 Glutamine amidotransferase type 2 domain BEN78_11385 IPR000836 Phosphoribosyltransferase domain BEN78_11390 IPR011197 Uncharacterised conserved protein UCP012318 BEN78_11390 IPR009078 Ferritin-like superfamily BEN78_11390 IPR007402 Protein of unknown function DUF455 BEN78_11410 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type BEN78_11410 IPR029052 Metallo-dependent phosphatase-like BEN78_11410 IPR010138 UDP-2,3-diacylglucosamine hydrolase BEN78_11415 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding BEN78_11415 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_11415 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain BEN78_11415 IPR000924 Glutamyl/glutaminyl-tRNA synthetase BEN78_11415 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial BEN78_11415 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BEN78_11415 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 BEN78_11415 IPR033910 Glutamyl-tRNA synthetase BEN78_11420 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_11420 IPR002481 Ferric-uptake regulator BEN78_11420 IPR036390 Winged helix DNA-binding domain superfamily BEN78_11425 IPR039426 Vitamin B12 transporter BtuB-like BEN78_11425 IPR012910 TonB-dependent receptor, plug domain BEN78_11425 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_11425 IPR010916 TonB box, conserved site BEN78_11425 IPR011276 TonB-dependent haem/haemoglobin receptor BEN78_11425 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_11425 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_11425 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor BEN78_11445 IPR032466 Metal-dependent hydrolase BEN78_11445 IPR011059 Metal-dependent hydrolase, composite domain superfamily BEN78_11445 IPR005920 Imidazolonepropionase BEN78_11445 IPR006680 Amidohydrolase-related BEN78_11455 IPR023786 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase BEN78_11455 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_11455 IPR002938 FAD-binding domain BEN78_11460 IPR023546 Methylated-DNA--protein-cysteine methyltransferase BEN78_11460 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain BEN78_11460 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain BEN78_11460 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_11460 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding BEN78_11460 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily BEN78_11460 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site BEN78_11465 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal BEN78_11465 IPR004026 Ada DNA repair, metal-binding BEN78_11465 IPR035451 Ada-like domain superfamily BEN78_11465 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal BEN78_11465 IPR011257 DNA glycosylase BEN78_11465 IPR018062 HTH domain AraC-type, conserved site BEN78_11465 IPR018060 DNA binding HTH domain, AraC-type BEN78_11465 IPR009057 Homeobox-like domain superfamily BEN78_11465 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily BEN78_11465 IPR003265 HhH-GPD domain BEN78_11485 IPR035085 Urocanase, Rossmann-like domain BEN78_11485 IPR035400 Urocanase, N-terminal domain BEN78_11485 IPR035401 Urocanase, C-terminal domain BEN78_11485 IPR038364 Urocanase, central domain superfamily BEN78_11485 IPR023637 Urocanase BEN78_11485 IPR023636 Urocanase conserved site BEN78_11485 IPR036190 Urocanase superfamily BEN78_11495 IPR011057 Mss4-like superfamily BEN78_11495 IPR028427 Peptide methionine sulfoxide reductase BEN78_11495 IPR002579 Peptide methionine sulphoxide reductase MrsB BEN78_11500 IPR005828 Major facilitator, sugar transporter-like BEN78_11500 IPR020846 Major facilitator superfamily domain BEN78_11500 IPR004736 MFS transporter, metabolite:H symporter BEN78_11500 IPR036259 MFS transporter superfamily BEN78_11500 IPR005829 Sugar transporter, conserved site BEN78_11510 IPR003416 MgtC/SapB/SrpB/YhiD family BEN78_11540 IPR002818 DJ-1/PfpI BEN78_11540 IPR029062 Class I glutamine amidotransferase-like BEN78_11540 IPR006286 Deglycase PfpI BEN78_11545 IPR018973 DEAD/DEAH-box helicase, putative BEN78_11545 IPR011545 DEAD/DEAH box helicase domain BEN78_11545 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN78_11545 IPR001650 Helicase, C-terminal BEN78_11545 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_11555 IPR002293 Amino acid/polyamine transporter I BEN78_11560 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_11560 IPR004498 Ribosomal protein L11 methyltransferase BEN78_11565 IPR029058 Alpha/Beta hydrolase fold BEN78_11565 IPR000073 Alpha/beta hydrolase fold-1 BEN78_11575 IPR003439 ABC transporter-like BEN78_11575 IPR036640 ABC transporter type 1, transmembrane domain superfamily BEN78_11575 IPR003593 AAA+ ATPase domain BEN78_11575 IPR011527 ABC transporter type 1, transmembrane domain BEN78_11575 IPR039421 Type I protein exporter BEN78_11575 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_11575 IPR017871 ABC transporter, conserved site BEN78_11580 IPR013154 Alcohol dehydrogenase, N-terminal BEN78_11580 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site BEN78_11580 IPR011032 GroES-like superfamily BEN78_11580 IPR036291 NAD(P)-binding domain superfamily BEN78_11580 IPR013149 Alcohol dehydrogenase, C-terminal BEN78_11580 IPR020843 Polyketide synthase, enoylreductase domain BEN78_11585 IPR009061 Putative DNA-binding domain superfamily BEN78_11585 IPR000551 MerR-type HTH domain BEN78_11585 IPR010211 Redox-sensitive transcriptional activator SoxR BEN78_11585 IPR015358 Transcription regulator MerR, DNA binding BEN78_11605 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily BEN78_11605 IPR002318 Alanine-tRNA ligase, class IIc BEN78_11605 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal BEN78_11605 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria BEN78_11605 IPR003156 DHHA1 domain BEN78_11605 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily BEN78_11605 IPR009000 Translation protein, beta-barrel domain superfamily BEN78_11605 IPR012947 Threonyl/alanyl tRNA synthetase, SAD BEN78_11605 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain BEN78_11610 IPR002942 RNA-binding S4 domain BEN78_11610 IPR036986 RNA-binding S4 domain superfamily BEN78_11615 IPR029787 Nucleotide cyclase BEN78_11615 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region BEN78_11615 IPR000160 GGDEF domain BEN78_11625 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily BEN78_11625 IPR001189 Manganese/iron superoxide dismutase BEN78_11625 IPR019833 Manganese/iron superoxide dismutase, binding site BEN78_11625 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily BEN78_11625 IPR019831 Manganese/iron superoxide dismutase, N-terminal BEN78_11625 IPR019832 Manganese/iron superoxide dismutase, C-terminal BEN78_11630 IPR002109 Glutaredoxin BEN78_11630 IPR004480 Monothiol glutaredoxin-related BEN78_11630 IPR014434 Monothiol glutaredoxin BEN78_11630 IPR033658 Glutaredoxin, PICOT-like BEN78_11630 IPR036249 Thioredoxin-like superfamily BEN78_11640 IPR002771 Multiple antibiotic resistance (MarC)-related BEN78_11645 IPR039426 Vitamin B12 transporter BtuB-like BEN78_11645 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_11645 IPR013784 Carbohydrate-binding-like fold BEN78_11650 IPR021826 Domain of unknown function DUF3412 BEN78_11650 IPR031100 LOG family BEN78_11650 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily BEN78_11650 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal BEN78_11655 IPR010559 Signal transduction histidine kinase, internal region BEN78_11655 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region BEN78_11655 IPR003018 GAF domain BEN78_11655 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_11700 IPR001650 Helicase, C-terminal BEN78_11700 IPR004807 UvrABC system, subunit B BEN78_11700 IPR041471 UvrB, interaction domain BEN78_11700 IPR036876 UVR domain superfamily BEN78_11700 IPR001943 UVR domain BEN78_11700 IPR024759 UvrB, YAD/RRR-motif-containing domain BEN78_11700 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_11700 IPR006935 Helicase/UvrB, N-terminal BEN78_11700 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN78_11720 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily BEN78_11720 IPR015943 WD40/YVTN repeat-like-containing domain superfamily BEN78_11730 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_11730 IPR010105 TonB-dependent siderophore receptor BEN78_11730 IPR010916 TonB box, conserved site BEN78_11730 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_11730 IPR039423 TonB-dependent receptor-like BEN78_11730 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_11730 IPR012910 TonB-dependent receptor, plug domain BEN78_11730 IPR030149 TonB-dependent siderophore receptor FcuA/FatA BEN78_11730 IPR010917 TonB-dependent receptor, conserved site BEN78_11740 IPR005765 Uracil phosphoribosyl transferase BEN78_11740 IPR029057 Phosphoribosyltransferase-like BEN78_11740 IPR000836 Phosphoribosyltransferase domain BEN78_11740 IPR034332 Uracil phosphoribosyltransferase, bacterial-type BEN78_11760 IPR008162 Inorganic pyrophosphatase BEN78_11760 IPR036649 Inorganic pyrophosphatase superfamily BEN78_11765 IPR006680 Amidohydrolase-related BEN78_11765 IPR005920 Imidazolonepropionase BEN78_11765 IPR011059 Metal-dependent hydrolase, composite domain superfamily BEN78_11765 IPR032466 Metal-dependent hydrolase BEN78_11770 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BEN78_11770 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BEN78_11770 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_11770 IPR005814 Aminotransferase class-III BEN78_11770 IPR004636 Acetylornithine/Succinylornithine transaminase family BEN78_11775 IPR019885 Transcription regulator HTH, AsnC-type, conserved site BEN78_11775 IPR011008 Dimeric alpha-beta barrel BEN78_11775 IPR000485 AsnC-type HTH domain BEN78_11775 IPR019888 Transcription regulator AsnC-type BEN78_11775 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BEN78_11775 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_11775 IPR036390 Winged helix DNA-binding domain superfamily BEN78_11775 IPR011991 ArsR-like helix-turn-helix domain BEN78_11780 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily BEN78_11780 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA BEN78_11780 IPR042118 QueA, domain 1 BEN78_11780 IPR042119 QueA, domain 2 BEN78_11790 IPR004803 tRNA-guanine transglycosylase BEN78_11790 IPR002616 tRNA-guanine(15) transglycosylase-like BEN78_11790 IPR036511 Queuine tRNA-ribosyltransferase-like BEN78_11795 IPR003849 Preprotein translocase YajC BEN78_11800 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BEN78_11800 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial BEN78_11800 IPR027398 SecD export protein N-terminal TM domain BEN78_11800 IPR005791 Protein translocase subunit SecD BEN78_11800 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site BEN78_11800 IPR001036 Acriflavin resistance protein BEN78_11805 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial BEN78_11805 IPR005665 Protein-export membrane protein SecF, bacterial BEN78_11805 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site BEN78_11805 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BEN78_11810 IPR020583 Inositol monophosphatase, metal-binding site BEN78_11810 IPR033942 Inositol monophosphatase BEN78_11810 IPR000760 Inositol monophosphatase-like BEN78_11810 IPR020550 Inositol monophosphatase, conserved site BEN78_11810 IPR022337 Inositol monophosphatase, SuhB BEN78_11815 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BEN78_11815 IPR001537 tRNA/rRNA methyltransferase, SpoU type BEN78_11815 IPR004384 RNA methyltransferase TrmJ/LasT BEN78_11815 IPR029028 Alpha/beta knot methyltransferases BEN78_11825 IPR036318 FAD-binding, type PCMH-like superfamily BEN78_11825 IPR016169 FAD-binding, type PCMH, subdomain 2 BEN78_11825 IPR002550 CNNM, transmembrane domain BEN78_11825 IPR000644 CBS domain BEN78_11825 IPR005170 Transporter-associated domain BEN78_11835 IPR001204 Phosphate transporter BEN78_11855 IPR008753 Peptidase M13, N-terminal domain BEN78_11855 IPR018497 Peptidase M13, C-terminal domain BEN78_11855 IPR024079 Metallopeptidase, catalytic domain superfamily BEN78_11855 IPR000718 Peptidase M13 BEN78_11855 IPR042089 Peptidase M13, domain 2 BEN78_11860 IPR004771 K+/H+ exchanger BEN78_11860 IPR006153 Cation/H+ exchanger BEN78_11860 IPR036291 NAD(P)-binding domain superfamily BEN78_11860 IPR038770 Sodium/solute symporter superfamily BEN78_11860 IPR003148 Regulator of K+ conductance, N-terminal BEN78_11870 IPR014014 RNA helicase, DEAD-box type, Q motif BEN78_11870 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BEN78_11870 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_11870 IPR001650 Helicase, C-terminal BEN78_11870 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN78_11870 IPR028622 ATP-dependent RNA helicase RhlE BEN78_11870 IPR011545 DEAD/DEAH box helicase domain BEN78_11905 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_11905 IPR039420 Transcriptional regulatory protein WalR-like BEN78_11905 IPR001789 Signal transduction response regulator, receiver domain BEN78_11905 IPR016032 Signal transduction response regulator, C-terminal effector BEN78_11905 IPR001867 OmpR/PhoB-type DNA-binding domain BEN78_11905 IPR011006 CheY-like superfamily BEN78_11910 IPR013656 PAS fold-4 BEN78_11910 IPR035965 PAS domain superfamily BEN78_11910 IPR000014 PAS domain BEN78_11910 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BEN78_11910 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BEN78_11910 IPR005467 Histidine kinase domain BEN78_11910 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_11910 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BEN78_11910 IPR011006 CheY-like superfamily BEN78_11910 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_11910 IPR001789 Signal transduction response regulator, receiver domain BEN78_11915 IPR005594 YadA-like, C-terminal BEN78_11915 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_11915 IPR024973 ESPR domain BEN78_11915 IPR008640 Head domain of trimeric autotransporter adhesin BEN78_11915 IPR008635 Coiled stalk of trimeric autotransporter adhesin BEN78_11920 IPR007280 Peptidase, C-terminal, archaeal/bacterial BEN78_11920 IPR000209 Peptidase S8/S53 domain BEN78_11920 IPR036852 Peptidase S8/S53 domain superfamily BEN78_11920 IPR023827 Peptidase S8, subtilisin, Asp-active site BEN78_11920 IPR034176 Peptidase MprA-like catalytic domain BEN78_11920 IPR015500 Peptidase S8, subtilisin-related BEN78_11920 IPR023828 Peptidase S8, subtilisin, Ser-active site BEN78_11920 IPR022398 Peptidase S8, subtilisin, His-active site BEN78_11925 IPR018107 Sodium:dicarboxylate symporter, conserved site BEN78_11925 IPR001991 Sodium:dicarboxylate symporter BEN78_11925 IPR033380 Glutamate-aspartate symport protein GltP/GltT BEN78_11925 IPR036458 Sodium:dicarboxylate symporter superfamily BEN78_11930 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like BEN78_11930 IPR011765 Peptidase M16, N-terminal BEN78_11930 IPR001431 Peptidase M16, zinc-binding site BEN78_11930 IPR007863 Peptidase M16, C-terminal BEN78_11950 IPR011009 Protein kinase-like domain superfamily BEN78_11950 IPR005543 PASTA domain BEN78_11950 IPR000719 Protein kinase domain BEN78_11950 IPR008271 Serine/threonine-protein kinase, active site BEN78_11950 IPR017441 Protein kinase, ATP binding site BEN78_11960 IPR011990 Tetratricopeptide-like helical domain superfamily BEN78_11960 IPR036249 Thioredoxin-like superfamily BEN78_11960 IPR013766 Thioredoxin domain BEN78_11975 IPR000160 GGDEF domain BEN78_11975 IPR011006 CheY-like superfamily BEN78_11975 IPR029787 Nucleotide cyclase BEN78_11975 IPR001789 Signal transduction response regulator, receiver domain BEN78_11980 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BEN78_11980 IPR002300 Aminoacyl-tRNA synthetase, class Ia BEN78_11980 IPR002302 Leucine-tRNA ligase BEN78_11980 IPR025709 Leucyl-tRNA synthetase, editing domain BEN78_11980 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding BEN78_11980 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_11980 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain BEN78_11980 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding BEN78_11995 IPR004821 Cytidyltransferase-like domain BEN78_11995 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase BEN78_11995 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_12000 IPR004394 Protein Iojap/ribosomal silencing factor RsfS BEN78_12005 IPR029028 Alpha/beta knot methyltransferases BEN78_12005 IPR003742 RNA methyltransferase RlmH BEN78_12005 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BEN78_12010 IPR036291 NAD(P)-binding domain superfamily BEN78_12010 IPR017476 UDP-glucose/GDP-mannose dehydrogenase BEN78_12010 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal BEN78_12010 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase BEN78_12010 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal BEN78_12010 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BEN78_12010 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation BEN78_12010 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily BEN78_12020 IPR034291 Thiamine phosphate synthase BEN78_12020 IPR022998 Thiamine phosphate synthase/TenI BEN78_12020 IPR013785 Aldolase-type TIM barrel BEN78_12020 IPR029056 Ribokinase-like BEN78_12020 IPR036206 Thiamin phosphate synthase superfamily BEN78_12020 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase BEN78_12020 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase BEN78_12035 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_12035 IPR002716 PIN domain BEN78_12035 IPR029060 PIN-like domain superfamily BEN78_12035 IPR003714 PhoH-like protein BEN78_12040 IPR036249 Thioredoxin-like superfamily BEN78_12040 IPR013766 Thioredoxin domain BEN78_12040 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant BEN78_12050 IPR020624 Schiff base-forming aldolase, conserved site BEN78_12050 IPR020625 Schiff base-forming aldolase, active site BEN78_12050 IPR002220 DapA-like BEN78_12050 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA BEN78_12050 IPR013785 Aldolase-type TIM barrel BEN78_12060 IPR022569 Ferredoxin, C-terminal BEN78_12060 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BEN78_12060 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BEN78_12060 IPR000813 7Fe ferredoxin BEN78_12070 IPR025866 Polymerase A arginine-rich C-terminal domain BEN78_12070 IPR010206 Poly(A) polymerase I BEN78_12070 IPR002646 Poly A polymerase, head domain BEN78_12070 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain BEN78_12075 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily BEN78_12075 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK BEN78_12080 IPR040442 Pyruvate kinase-like domain superfamily BEN78_12080 IPR003700 Ketopantoate hydroxymethyltransferase BEN78_12080 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BEN78_12085 IPR003721 Pantoate-beta-alanine ligase BEN78_12085 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain BEN78_12085 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_12090 IPR003190 Aspartate decarboxylase BEN78_12090 IPR009010 Aspartate decarboxylase-like domain superfamily BEN78_12095 IPR018189 Phosphoglucose isomerase, conserved site BEN78_12095 IPR035476 Phosphoglucose isomerase, SIS domain 1 BEN78_12095 IPR001672 Phosphoglucose isomerase (PGI) BEN78_12095 IPR023096 Phosphoglucose isomerase, C-terminal BEN78_12095 IPR035482 Phosphoglucose isomerase, SIS domain 2 BEN78_12100 IPR004453 Epoxyqueuosine reductase QueG BEN78_12100 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BEN78_12100 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BEN78_12100 IPR013542 Domain of unknown function DUF1730 BEN78_12105 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr BEN78_12105 IPR029056 Ribokinase-like BEN78_12105 IPR036652 YjeF N-terminal domain superfamily BEN78_12105 IPR004443 YjeF N-terminal domain BEN78_12105 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase BEN78_12105 IPR017953 Carbohydrate kinase, predicted, conserved site BEN78_12110 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE BEN78_12110 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_12115 IPR006311 Twin-arginine translocation pathway, signal sequence BEN78_12115 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain BEN78_12115 IPR021731 AMIN domain BEN78_12120 IPR002099 DNA mismatch repair protein family, N-terminal BEN78_12120 IPR042121 MutL, C-terminal domain, regulatory subdomain BEN78_12120 IPR042120 MutL, C-terminal domain, dimerisation subdomain BEN78_12120 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_12120 IPR014790 MutL, C-terminal, dimerisation BEN78_12120 IPR037198 MutL, C-terminal domain superfamily BEN78_12120 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms BEN78_12120 IPR014762 DNA mismatch repair, conserved site BEN78_12120 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BEN78_12120 IPR020667 DNA mismatch repair protein, MutL BEN78_12120 IPR020568 Ribosomal protein S5 domain 2-type fold BEN78_12120 IPR013507 DNA mismatch repair protein, S5 domain 2-like BEN78_12135 IPR023954 C4-dicarboxylate transport protein BEN78_12135 IPR001991 Sodium:dicarboxylate symporter BEN78_12135 IPR018107 Sodium:dicarboxylate symporter, conserved site BEN78_12135 IPR036458 Sodium:dicarboxylate symporter superfamily BEN78_12140 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_12140 IPR029055 Nucleophile aminohydrolases, N-terminal BEN78_12140 IPR017932 Glutamine amidotransferase type 2 domain BEN78_12140 IPR033738 Asparagine synthase, N-terminal domain BEN78_12140 IPR006426 Asparagine synthase, glutamine-hydrolyzing BEN78_12140 IPR001962 Asparagine synthase BEN78_12150 IPR024906 Enoyl reductase FAD binding domain BEN78_12150 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative BEN78_12150 IPR010758 Trans-2-enoyl-CoA reductase BEN78_12170 IPR023343 Penicillin amidase type, domain 1 BEN78_12170 IPR014395 Penicillin/GL-7-ACA/AHL acylase BEN78_12170 IPR029055 Nucleophile aminohydrolases, N-terminal BEN78_12170 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase BEN78_12180 IPR009078 Ferritin-like superfamily BEN78_12180 IPR012347 Ferritin-like BEN78_12180 IPR002024 Bacterioferritin BEN78_12180 IPR009040 Ferritin-like diiron domain BEN78_12180 IPR008331 Ferritin/DPS protein domain BEN78_12185 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_12185 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification BEN78_12185 IPR025835 Thiopurine S-methyltransferase BEN78_12185 IPR008854 TPMT family BEN78_12190 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat BEN78_12190 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal BEN78_12190 IPR013760 DNA topoisomerase, type IIA-like domain superfamily BEN78_12190 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal BEN78_12190 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily BEN78_12190 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta BEN78_12190 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative BEN78_12195 IPR036390 Winged helix DNA-binding domain superfamily BEN78_12195 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_12195 IPR018335 Transcription regulator HTH, Crp-type, conserved site BEN78_12195 IPR014710 RmlC-like jelly roll fold BEN78_12195 IPR000595 Cyclic nucleotide-binding domain BEN78_12195 IPR018490 Cyclic nucleotide-binding-like BEN78_12195 IPR012318 Crp-type HTH domain BEN78_12200 IPR035909 Methylesterase CheB, C-terminal BEN78_12200 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal BEN78_12200 IPR000780 MCP methyltransferase, CheR-type BEN78_12200 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_12200 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase BEN78_12200 IPR000014 PAS domain BEN78_12200 IPR013656 PAS fold-4 BEN78_12200 IPR035965 PAS domain superfamily BEN78_12200 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal BEN78_12235 IPR029064 50S ribosomal protein L30e-like BEN78_12235 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB BEN78_12235 IPR004441 RNA methyltransferase TrmH family BEN78_12235 IPR013123 RNA 2-O ribose methyltransferase, substrate binding BEN78_12235 IPR001537 tRNA/rRNA methyltransferase, SpoU type BEN78_12235 IPR029028 Alpha/beta knot methyltransferases BEN78_12235 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BEN78_12245 IPR000390 Small multidrug resistance protein family BEN78_12250 IPR029052 Metallo-dependent phosphatase-like BEN78_12250 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type BEN78_12255 IPR036397 Ribonuclease H superfamily BEN78_12255 IPR012337 Ribonuclease H-like superfamily BEN78_12255 IPR005987 Ribonuclease T BEN78_12255 IPR013520 Exonuclease, RNase T/DNA polymerase III BEN78_12260 IPR028366 Phosphate transport system protein PhoU BEN78_12260 IPR038078 PhoU-like domain superfamily BEN78_12260 IPR026022 PhoU domain BEN78_12265 IPR003593 AAA+ ATPase domain BEN78_12265 IPR005670 Phosphate transport system permease protein 1 BEN78_12265 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_12265 IPR015850 ABC transporter, phosphate import, PstB BEN78_12265 IPR017871 ABC transporter, conserved site BEN78_12265 IPR003439 ABC transporter-like BEN78_12270 IPR035906 MetI-like superfamily BEN78_12270 IPR005672 Phosphate transport system permease protein PstA BEN78_12270 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BEN78_12275 IPR035906 MetI-like superfamily BEN78_12275 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BEN78_12275 IPR011864 Phosphate ABC transporter, permease protein PstC BEN78_12280 IPR024370 PBP domain BEN78_12280 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS BEN78_12285 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS BEN78_12285 IPR024370 PBP domain BEN78_12300 IPR004036 Endonuclease III-like, conserved site-2 BEN78_12300 IPR011257 DNA glycosylase BEN78_12300 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif BEN78_12300 IPR004035 Endonuclease III, iron-sulphur binding site BEN78_12300 IPR003265 HhH-GPD domain BEN78_12300 IPR000445 Helix-hairpin-helix motif BEN78_12300 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal BEN78_12300 IPR005759 Endonuclease III BEN78_12310 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site BEN78_12310 IPR029045 ClpP/crotonase-like domain superfamily BEN78_12310 IPR014748 Enoyl-CoA hydratase, C-terminal BEN78_12310 IPR001753 Enoyl-CoA hydratase/isomerase BEN78_12315 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BEN78_12315 IPR008104 Macrophage infectivity potentiator BEN78_12315 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily BEN78_12315 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal BEN78_12335 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family BEN78_12335 IPR029069 HotDog domain superfamily BEN78_12340 IPR003439 ABC transporter-like BEN78_12340 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_12340 IPR004602 UvrABC system subunit A BEN78_12340 IPR041552 UvrA DNA-binding domain BEN78_12340 IPR041102 UvrA, interaction domain BEN78_12340 IPR017871 ABC transporter, conserved site BEN78_12345 IPR028909 Ribosomal protein L21-like BEN78_12345 IPR001787 Ribosomal protein L21 BEN78_12345 IPR036164 L21-like superfamily BEN78_12345 IPR018258 Ribosomal protein L21, conserved site BEN78_12350 IPR001684 Ribosomal protein L27 BEN78_12350 IPR018261 Ribosomal protein L27, conserved site BEN78_12355 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_12355 IPR031167 OBG-type guanine nucleotide-binding (G) domain BEN78_12355 IPR035101 GTP-binding protein, Obg-type BEN78_12355 IPR014100 GTP-binding protein Obg/CgtA BEN78_12355 IPR006074 GTP1/OBG, conserved site BEN78_12355 IPR006073 GTP binding domain BEN78_12355 IPR036726 GTP1/OBG domain superfamily BEN78_12355 IPR006169 GTP1/OBG domain BEN78_12360 IPR002583 Ribosomal protein S20 BEN78_12360 IPR036510 Ribosomal protein S20 superfamily BEN78_12365 IPR004268 Peptidoglycan biosynthesis protein MurJ BEN78_12370 IPR004821 Cytidyltransferase-like domain BEN78_12370 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_12370 IPR023465 Riboflavin kinase domain superfamily BEN78_12370 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic BEN78_12370 IPR002606 Riboflavin kinase, bacterial BEN78_12370 IPR015864 FAD synthetase BEN78_12370 IPR023468 Riboflavin kinase BEN78_12375 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BEN78_12375 IPR002300 Aminoacyl-tRNA synthetase, class Ia BEN78_12375 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain BEN78_12375 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding BEN78_12375 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain BEN78_12375 IPR023585 Isoleucine-tRNA ligase, type 1 BEN78_12375 IPR002301 Isoleucine-tRNA ligase BEN78_12375 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_12375 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding BEN78_12375 IPR010663 Zinc finger, FPG/IleRS-type BEN78_12380 IPR001872 Peptidase A8, signal peptidase II BEN78_12385 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase BEN78_12415 IPR007894 MASE2 BEN78_12415 IPR029787 Nucleotide cyclase BEN78_12415 IPR000160 GGDEF domain BEN78_12420 IPR003593 AAA+ ATPase domain BEN78_12420 IPR004504 DNA repair protein RadA BEN78_12420 IPR041166 LapB, rubredoxin metal binding domain BEN78_12420 IPR020568 Ribosomal protein S5 domain 2-type fold BEN78_12420 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BEN78_12420 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain BEN78_12420 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_12430 IPR004638 Drug resistance transporter EmrB-like BEN78_12430 IPR011701 Major facilitator superfamily BEN78_12430 IPR020846 Major facilitator superfamily domain BEN78_12430 IPR036259 MFS transporter superfamily BEN78_12435 IPR005694 Efflux pump membrane protein BEN78_12435 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BEN78_12440 IPR010131 RND efflux system, outer membrane lipoprotein, NodT BEN78_12440 IPR003423 Outer membrane efflux protein BEN78_12445 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_12445 IPR000835 MarR-type HTH domain BEN78_12445 IPR036390 Winged helix DNA-binding domain superfamily BEN78_12455 IPR017562 Cytochrome c-type biogenesis protein CcsA BEN78_12455 IPR002541 Cytochrome c assembly protein BEN78_12460 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_12460 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily BEN78_12460 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain BEN78_12460 IPR022941 Signal recognition particle, SRP54 subunit BEN78_12460 IPR004780 Signal recognition particle protein BEN78_12460 IPR004125 Signal recognition particle, SRP54 subunit, M-domain BEN78_12460 IPR013822 Signal recognition particle SRP54, helical bundle BEN78_12460 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily BEN78_12460 IPR003593 AAA+ ATPase domain BEN78_12465 IPR013785 Aldolase-type TIM barrel BEN78_12465 IPR004136 Nitronate monooxygenase BEN78_12475 IPR023803 Ribosomal protein S16 domain superfamily BEN78_12475 IPR020592 Ribosomal protein S16, conserved site BEN78_12475 IPR000307 Ribosomal protein S16 BEN78_12480 IPR009000 Translation protein, beta-barrel domain superfamily BEN78_12480 IPR036976 RimM, N-terminal domain superfamily BEN78_12480 IPR002676 RimM, N-terminal BEN78_12480 IPR011033 PRC-barrel-like superfamily BEN78_12480 IPR027275 PRC-barrel domain BEN78_12480 IPR011961 16S rRNA processing protein RimM BEN78_12485 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal BEN78_12485 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BEN78_12485 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain BEN78_12485 IPR029028 Alpha/beta knot methyltransferases BEN78_12485 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria BEN78_12490 IPR008991 Translation protein SH3-like domain superfamily BEN78_12490 IPR038657 Ribosomal protein L19 superfamily BEN78_12490 IPR001857 Ribosomal protein L19 BEN78_12490 IPR018257 Ribosomal protein L19, conserved site BEN78_12505 IPR011006 CheY-like superfamily BEN78_12505 IPR001867 OmpR/PhoB-type DNA-binding domain BEN78_12505 IPR016032 Signal transduction response regulator, C-terminal effector BEN78_12505 IPR039420 Transcriptional regulatory protein WalR-like BEN78_12505 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_12505 IPR001789 Signal transduction response regulator, receiver domain BEN78_12515 IPR002942 RNA-binding S4 domain BEN78_12515 IPR036986 RNA-binding S4 domain superfamily BEN78_12515 IPR025708 Heat shock protein 15 BEN78_12525 IPR034330 Glutathione S-transferases, class Zeta , C-terminal BEN78_12525 IPR010987 Glutathione S-transferase, C-terminal-like BEN78_12525 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BEN78_12525 IPR036249 Thioredoxin-like superfamily BEN78_12525 IPR034333 Glutathione S-transferases, class Zeta , N-terminal BEN78_12525 IPR040079 Glutathione Transferase family BEN78_12525 IPR005955 Glutathione S-transferases, class Zeta BEN78_12525 IPR004045 Glutathione S-transferase, N-terminal BEN78_12530 IPR002016 Haem peroxidase BEN78_12530 IPR000763 Catalase-peroxidase haem BEN78_12530 IPR010255 Haem peroxidase superfamily BEN78_12530 IPR019794 Peroxidase, active site BEN78_12530 IPR019793 Peroxidases heam-ligand binding site BEN78_12535 IPR036678 MutS, connector domain superfamily BEN78_12535 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_12535 IPR007860 DNA mismatch repair protein MutS, connector domain BEN78_12535 IPR036187 DNA mismatch repair protein MutS, core domain superfamily BEN78_12535 IPR007695 DNA mismatch repair protein MutS-like, N-terminal BEN78_12535 IPR005748 DNA mismatch repair protein MutS BEN78_12535 IPR017261 DNA mismatch repair protein MutS/MSH BEN78_12535 IPR007696 DNA mismatch repair protein MutS, core BEN78_12535 IPR007861 DNA mismatch repair protein MutS, clamp BEN78_12535 IPR000432 DNA mismatch repair protein MutS, C-terminal BEN78_12535 IPR016151 DNA mismatch repair protein MutS, N-terminal BEN78_12540 IPR004852 Di-haem cytochrome c peroxidase BEN78_12540 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase BEN78_12540 IPR036909 Cytochrome c-like domain superfamily BEN78_12540 IPR009056 Cytochrome c-like domain BEN78_12540 IPR022394 Methylamine utilisation protein, MauG BEN78_12550 IPR008136 CinA, C-terminal BEN78_12550 IPR036653 CinA-like, C-terminal BEN78_12555 IPR004147 UbiB domain BEN78_12555 IPR010232 Probable protein kinase UbiB BEN78_12555 IPR011009 Protein kinase-like domain superfamily BEN78_12560 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding BEN78_12560 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_12560 IPR023458 Methionine-tRNA ligase, type 1 BEN78_12560 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BEN78_12560 IPR012340 Nucleic acid-binding, OB-fold BEN78_12560 IPR029038 Methionyl-tRNA synthetase, Zn-domain BEN78_12560 IPR033911 Methioninyl-tRNA synthetase core domain BEN78_12560 IPR015413 Methionyl/Leucyl tRNA synthetase BEN78_12560 IPR002547 tRNA-binding domain BEN78_12560 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain BEN78_12560 IPR014758 Methionyl-tRNA synthetase BEN78_12560 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal BEN78_12575 IPR034904 Fe-S cluster assembly domain superfamily BEN78_12575 IPR019591 Mrp/NBP35 ATP-binding protein BEN78_12575 IPR000808 Mrp, conserved site BEN78_12575 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_12575 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 BEN78_12580 IPR010917 TonB-dependent receptor, conserved site BEN78_12580 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_12580 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_12580 IPR012910 TonB-dependent receptor, plug domain BEN78_12580 IPR039426 Vitamin B12 transporter BtuB-like BEN78_12580 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_12580 IPR010916 TonB box, conserved site BEN78_12585 IPR011962 dCTP deaminase BEN78_12585 IPR036157 dUTPase-like superfamily BEN78_12585 IPR029054 dUTPase-like BEN78_12585 IPR033704 dUTPase, trimeric BEN78_12600 IPR002925 Dienelactone hydrolase BEN78_12600 IPR029058 Alpha/Beta hydrolase fold BEN78_12605 IPR020612 Methylthiotransferase, conserved site BEN78_12605 IPR038135 Methylthiotransferase, N-terminal domain superfamily BEN78_12605 IPR041582 RimO, TRAM domain BEN78_12605 IPR005840 Ribosomal protein S12 methylthiotransferase RimO BEN78_12605 IPR006638 Elp3/MiaB/NifB BEN78_12605 IPR002792 TRAM domain BEN78_12605 IPR023404 Radical SAM, alpha/beta horseshoe BEN78_12605 IPR007197 Radical SAM BEN78_12605 IPR013848 Methylthiotransferase, N-terminal BEN78_12605 IPR005839 Methylthiotransferase BEN78_12620 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal BEN78_12620 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal BEN78_12620 IPR018151 Transcription elongation factor, GreA/GreB, conserved site BEN78_12620 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily BEN78_12620 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily BEN78_12620 IPR006358 Transcription elongation factor GreB BEN78_12620 IPR023459 Transcription elongation factor GreA/GreB family BEN78_12620 IPR028624 Transcription elongation factor GreA/GreB BEN78_12625 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_12625 IPR033186 Helicase HerA-like C-terminal BEN78_12635 IPR023346 Lysozyme-like domain superfamily BEN78_12635 IPR010618 Transglycosylase-like BEN78_12640 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 BEN78_12640 IPR003817 Phosphatidylserine decarboxylase-related BEN78_12640 IPR033177 Phosphatidylserine decarboxylase BEN78_12645 IPR003782 Copper chaperone SCO1/SenC BEN78_12645 IPR036249 Thioredoxin-like superfamily BEN78_12650 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BEN78_12650 IPR004556 Methyltransferase HemK-like BEN78_12650 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase BEN78_12650 IPR007848 Methyltransferase small domain BEN78_12650 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_12660 IPR020541 Chorismate synthase, conserved site BEN78_12660 IPR035904 Chorismate synthase AroC superfamily BEN78_12660 IPR000453 Chorismate synthase BEN78_12665 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain BEN78_12665 IPR036291 NAD(P)-binding domain superfamily BEN78_12665 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BEN78_12665 IPR023756 Glyoxylate/hydroxypyruvate reductase B BEN78_12665 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BEN78_12670 IPR012080 Aspartate-semialdehyde dehydrogenase BEN78_12670 IPR036291 NAD(P)-binding domain superfamily BEN78_12670 IPR000534 Semialdehyde dehydrogenase, NAD-binding BEN78_12670 IPR012280 Semialdehyde dehydrogenase, dimerisation domain BEN78_12670 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type BEN78_12680 IPR020103 Pseudouridine synthase, catalytic domain superfamily BEN78_12680 IPR001406 Pseudouridine synthase I, TruA BEN78_12680 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain BEN78_12680 IPR020095 Pseudouridine synthase I, TruA, C-terminal BEN78_12685 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) BEN78_12685 IPR011060 Ribulose-phosphate binding barrel BEN78_12685 IPR013785 Aldolase-type TIM barrel BEN78_12690 IPR000847 Transcription regulator HTH, LysR BEN78_12690 IPR037418 HTH-type transcriptional regulator TrpI, PBP2 BEN78_12690 IPR005119 LysR, substrate-binding BEN78_12690 IPR036390 Winged helix DNA-binding domain superfamily BEN78_12690 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_12695 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BEN78_12695 IPR023026 Tryptophan synthase beta chain/beta chain-like BEN78_12695 IPR001926 Pyridoxal-phosphate dependent enzyme BEN78_12695 IPR006653 Tryptophan synthase, beta chain, conserved site BEN78_12695 IPR006654 Tryptophan synthase, beta chain BEN78_12700 IPR018204 Tryptophan synthase, alpha chain, active site BEN78_12700 IPR011060 Ribulose-phosphate binding barrel BEN78_12700 IPR002028 Tryptophan synthase, alpha chain BEN78_12700 IPR013785 Aldolase-type TIM barrel BEN78_12705 IPR034733 Acetyl-CoA carboxylase BEN78_12705 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal BEN78_12705 IPR041010 Acetyl-coA carboxylase zinc finger domain BEN78_12705 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit BEN78_12705 IPR029045 ClpP/crotonase-like domain superfamily BEN78_12710 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III BEN78_12710 IPR005841 Alpha-D-phosphohexomutase superfamily BEN78_12710 IPR006352 Phosphoglucosamine mutase, bacterial type BEN78_12710 IPR005843 Alpha-D-phosphohexomutase, C-terminal BEN78_12710 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III BEN78_12710 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II BEN78_12710 IPR016066 Alpha-D-phosphohexomutase, conserved site BEN78_12710 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily BEN78_12710 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I BEN78_12725 IPR020861 Triosephosphate isomerase, active site BEN78_12725 IPR000652 Triosephosphate isomerase BEN78_12725 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic BEN78_12725 IPR035990 Triosephosphate isomerase superfamily BEN78_12725 IPR013785 Aldolase-type TIM barrel BEN78_12740 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily BEN78_12740 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 BEN78_12740 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid BEN78_12745 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit BEN78_12745 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit BEN78_12750 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site BEN78_12750 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit BEN78_12750 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily BEN78_12750 IPR010218 NADH dehydrogenase, subunit C BEN78_12755 IPR029014 [NiFe]-hydrogenase, large subunit BEN78_12755 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H BEN78_12755 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site BEN78_12755 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily BEN78_12755 IPR001135 NADH-quinone oxidoreductase, subunit D BEN78_12760 IPR002023 NADH-quinone oxidoreductase subunit E-like BEN78_12760 IPR042128 NuoE domain BEN78_12760 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal BEN78_12760 IPR036249 Thioredoxin-like superfamily BEN78_12765 IPR019554 Soluble ligand binding domain BEN78_12765 IPR011537 NADH ubiquinone oxidoreductase, F subunit BEN78_12765 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain BEN78_12765 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily BEN78_12765 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain BEN78_12765 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily BEN78_12765 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site BEN78_12770 IPR010228 NADH:ubiquinone oxidoreductase, subunit G BEN78_12770 IPR006656 Molybdopterin oxidoreductase BEN78_12770 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain BEN78_12770 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site BEN78_12770 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal BEN78_12770 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding BEN78_12770 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain BEN78_12770 IPR036010 2Fe-2S ferredoxin-like superfamily BEN78_12775 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site BEN78_12775 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H BEN78_12780 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BEN78_12780 IPR010226 NADH-quinone oxidoreductase, chain I BEN78_12780 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BEN78_12785 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 BEN78_12785 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ BEN78_12790 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like BEN78_12790 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K BEN78_12795 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup BEN78_12795 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit BEN78_12795 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 BEN78_12795 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal BEN78_12800 IPR003918 NADH:ubiquinone oxidoreductase BEN78_12800 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit BEN78_12800 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal BEN78_12800 IPR010227 NADH-quinone oxidoreductase, chain M/4 BEN78_12805 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 BEN78_12805 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit BEN78_12840 IPR035956 RimP, N-terminal domain superfamily BEN78_12840 IPR028989 Ribosome maturation factor RimP, N-terminal BEN78_12840 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily BEN78_12840 IPR028998 Ribosome maturation factor RimP, C-terminal BEN78_12840 IPR003728 Ribosome maturation factor RimP BEN78_12845 IPR010214 Transcription termination factor NusA, C-terminal duplication BEN78_12845 IPR015946 K homology domain-like, alpha/beta BEN78_12845 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical BEN78_12845 IPR025249 KH domain, NusA-like BEN78_12845 IPR009019 K homology domain superfamily, prokaryotic type BEN78_12845 IPR012340 Nucleic acid-binding, OB-fold BEN78_12845 IPR013735 Transcription factor NusA, N-terminal BEN78_12845 IPR030842 Transcription termination/antitermination protein NusA, bacterial BEN78_12845 IPR003029 S1 domain BEN78_12845 IPR022967 RNA-binding domain, S1 BEN78_12845 IPR036555 NusA, N-terminal domain superfamily BEN78_12845 IPR010213 Transcription termination factor NusA BEN78_12850 IPR009061 Putative DNA-binding domain superfamily BEN78_12850 IPR015760 Translation initiation factor IF- 2 BEN78_12850 IPR013575 Initiation factor 2 associated domain, bacterial BEN78_12850 IPR023115 Translation initiation factor IF- 2, domain 3 BEN78_12850 IPR009000 Translation protein, beta-barrel domain superfamily BEN78_12850 IPR036925 Translation initiation factor IF-2, domain 3 superfamily BEN78_12850 IPR000178 Translation initiation factor aIF-2, bacterial-like BEN78_12850 IPR006847 Translation initiation factor IF-2, N-terminal BEN78_12850 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_12850 IPR000795 Transcription factor, GTP-binding domain BEN78_12850 IPR005225 Small GTP-binding protein domain BEN78_12855 IPR000238 Ribosome-binding factor A BEN78_12855 IPR023799 Ribosome-binding factor A domain superfamily BEN78_12855 IPR020053 Ribosome-binding factor A, conserved site BEN78_12855 IPR015946 K homology domain-like, alpha/beta BEN78_12860 IPR032819 tRNA pseudouridylate synthase B, C-terminal BEN78_12860 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal BEN78_12860 IPR020103 Pseudouridine synthase, catalytic domain superfamily BEN78_12860 IPR014780 tRNA pseudouridine synthase II, TruB BEN78_12860 IPR015947 PUA-like superfamily BEN78_12860 IPR002501 Pseudouridine synthase II, N-terminal BEN78_12865 IPR000589 Ribosomal protein S15 BEN78_12865 IPR005290 Ribosomal protein S15, bacterial-type BEN78_12865 IPR009068 S15/NS1, RNA-binding BEN78_12870 IPR003029 S1 domain BEN78_12870 IPR036345 Exoribonuclease, PH domain 2 superfamily BEN78_12870 IPR012162 Polyribonucleotide nucleotidyltransferase BEN78_12870 IPR022967 RNA-binding domain, S1 BEN78_12870 IPR012340 Nucleic acid-binding, OB-fold BEN78_12870 IPR027408 PNPase/RNase PH domain superfamily BEN78_12870 IPR036612 K Homology domain, type 1 superfamily BEN78_12870 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain BEN78_12870 IPR004087 K Homology domain BEN78_12870 IPR001247 Exoribonuclease, phosphorolytic domain 1 BEN78_12870 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily BEN78_12870 IPR020568 Ribosomal protein S5 domain 2-type fold BEN78_12870 IPR004088 K Homology domain, type 1 BEN78_12870 IPR015847 Exoribonuclease, phosphorolytic domain 2 BEN78_12880 IPR039421 Type I protein exporter BEN78_12880 IPR011527 ABC transporter type 1, transmembrane domain BEN78_12880 IPR005074 Peptidase C39, bacteriocin processing BEN78_12880 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_12880 IPR003593 AAA+ ATPase domain BEN78_12880 IPR033838 Colicin V processing peptidase BEN78_12880 IPR017871 ABC transporter, conserved site BEN78_12880 IPR003439 ABC transporter-like BEN78_12880 IPR036640 ABC transporter type 1, transmembrane domain superfamily BEN78_12885 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BEN78_12885 IPR006144 Secretion protein HlyD, conserved site BEN78_12895 IPR007471 N-end aminoacyl transferase, N-terminal BEN78_12895 IPR007472 N-end rule aminoacyl transferase, C-terminal BEN78_12895 IPR016181 Acyl-CoA N-acyltransferase BEN78_12895 IPR030700 N-end rule aminoacyl transferase BEN78_12895 IPR017138 Aspartate/glutamate leucyltransferase BEN78_12905 IPR014284 RNA polymerase sigma-70 like domain BEN78_12905 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site BEN78_12905 IPR007627 RNA polymerase sigma-70 region 2 BEN78_12905 IPR039425 RNA polymerase sigma-70 like BEN78_12905 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 BEN78_12905 IPR013325 RNA polymerase sigma factor, region 2 BEN78_12905 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN78_12905 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_12915 IPR003703 Acyl-CoA thioesterase BEN78_12915 IPR029069 HotDog domain superfamily BEN78_12935 IPR020904 Short-chain dehydrogenase/reductase, conserved site BEN78_12935 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_12935 IPR036291 NAD(P)-binding domain superfamily BEN78_12945 IPR019614 S-adenosylmethionine-dependent methyltransferase BEN78_12945 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_12945 IPR004114 THUMP domain BEN78_12945 IPR000241 Putative RNA methylase domain BEN78_12945 IPR017244 Ribosomal RNA large subunit methyltransferase K/L BEN78_12945 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BEN78_12950 IPR008778 Pirin, C-terminal domain BEN78_12950 IPR003829 Pirin, N-terminal domain BEN78_12950 IPR012093 Pirin BEN78_12950 IPR011051 RmlC-like cupin domain superfamily BEN78_12950 IPR014710 RmlC-like jelly roll fold BEN78_12965 IPR007921 CHAP domain BEN78_12965 IPR018392 LysM domain BEN78_12965 IPR036779 LysM domain superfamily BEN78_12965 IPR038765 Papain-like cysteine peptidase superfamily BEN78_12975 IPR035681 ComA-like, MBL domain BEN78_12975 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN78_12975 IPR001279 Metallo-beta-lactamase BEN78_12975 IPR004797 Competence protein ComEC/Rec2 BEN78_12975 IPR004477 ComEC/Rec2-related protein BEN78_12980 IPR002898 MotA/TolQ/ExbB proton channel BEN78_12985 IPR003400 Biopolymer transport protein ExbD/TolR BEN78_12990 IPR003439 ABC transporter-like BEN78_12990 IPR039421 Type I protein exporter BEN78_12990 IPR011917 ABC transporter, lipid A export, MsbA BEN78_12990 IPR017871 ABC transporter, conserved site BEN78_12990 IPR036640 ABC transporter type 1, transmembrane domain superfamily BEN78_12990 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_12990 IPR003593 AAA+ ATPase domain BEN78_12990 IPR011527 ABC transporter type 1, transmembrane domain BEN78_12995 IPR003758 Tetraacyldisaccharide 4'-kinase BEN78_12995 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_13000 IPR024188 Glutamate synthase large subunit-like protein BEN78_13000 IPR027283 Glutamate synthase large subunit-like protein, bacteria BEN78_13000 IPR002932 Glutamate synthase domain BEN78_13000 IPR013785 Aldolase-type TIM barrel BEN78_13015 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_13015 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase BEN78_13015 IPR003329 Acylneuraminate cytidylyltransferase BEN78_13020 IPR036249 Thioredoxin-like superfamily BEN78_13020 IPR023555 Thiol-disulphide oxidoreductase ResA BEN78_13020 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant BEN78_13020 IPR013766 Thioredoxin domain BEN78_13025 IPR004791 UvrABC system, subunit C BEN78_13025 IPR001943 UVR domain BEN78_13025 IPR038476 UvrC homology region 2 superfamily BEN78_13025 IPR001162 UvrC family homology region BEN78_13025 IPR000305 GIY-YIG endonuclease BEN78_13025 IPR035901 GIY-YIG endonuclease superfamily BEN78_13025 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 BEN78_13025 IPR036876 UVR domain superfamily BEN78_13025 IPR010994 RuvA domain 2-like BEN78_13030 IPR000462 CDP-alcohol phosphatidyltransferase BEN78_13030 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial BEN78_13030 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase BEN78_13055 IPR012292 Globin/Protoglobin BEN78_13055 IPR039435 Diguanylate cyclase DosC, globin sensor domain BEN78_13055 IPR000160 GGDEF domain BEN78_13055 IPR029787 Nucleotide cyclase BEN78_13055 IPR009050 Globin-like superfamily BEN78_13060 IPR036249 Thioredoxin-like superfamily BEN78_13060 IPR006659 Arsenate reductase BEN78_13060 IPR006660 Arsenate reductase-like BEN78_13075 IPR036849 Enolase-like, C-terminal domain superfamily BEN78_13075 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site BEN78_13075 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal BEN78_13075 IPR029065 Enolase C-terminal domain-like BEN78_13075 IPR029017 Enolase-like, N-terminal BEN78_13075 IPR034603 Dipeptide epimerase BEN78_13075 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain BEN78_13085 IPR010917 TonB-dependent receptor, conserved site BEN78_13085 IPR010916 TonB box, conserved site BEN78_13085 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_13085 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_13085 IPR039426 Vitamin B12 transporter BtuB-like BEN78_13085 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_13085 IPR012910 TonB-dependent receptor, plug domain BEN78_13090 IPR012338 Beta-lactamase/transpeptidase-like BEN78_13090 IPR001466 Beta-lactamase-related BEN78_13090 IPR001586 Beta-lactamase, class-C active site BEN78_13110 IPR020816 Histone-like DNA-binding protein, conserved site BEN78_13110 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily BEN78_13110 IPR000119 Histone-like DNA-binding protein BEN78_13115 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type BEN78_13115 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site BEN78_13115 IPR008880 Trigger factor, C-terminal BEN78_13115 IPR023059 Foldase protein PrsA BEN78_13115 IPR037041 Trigger factor, C-terminal domain superfamily BEN78_13115 IPR027304 Trigger factor/SurA domain superfamily BEN78_13120 IPR007921 CHAP domain BEN78_13120 IPR018392 LysM domain BEN78_13120 IPR038765 Papain-like cysteine peptidase superfamily BEN78_13120 IPR036779 LysM domain superfamily BEN78_13125 IPR001279 Metallo-beta-lactamase BEN78_13125 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain BEN78_13125 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN78_13125 IPR017782 Hydroxyacylglutathione hydrolase BEN78_13125 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain BEN78_13135 IPR012337 Ribonuclease H-like superfamily BEN78_13135 IPR002156 Ribonuclease H domain BEN78_13135 IPR036397 Ribonuclease H superfamily BEN78_13135 IPR022892 Ribonuclease HI BEN78_13140 IPR036397 Ribonuclease H superfamily BEN78_13140 IPR012337 Ribonuclease H-like superfamily BEN78_13140 IPR013520 Exonuclease, RNase T/DNA polymerase III BEN78_13140 IPR006309 DNA polymerase 3, epsilon subunit BEN78_13140 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain BEN78_13150 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_13150 IPR011102 Signal transduction histidine kinase, HWE region BEN78_13150 IPR035965 PAS domain superfamily BEN78_13150 IPR000700 PAS-associated, C-terminal BEN78_13150 IPR000014 PAS domain BEN78_13150 IPR001610 PAC motif BEN78_13165 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BEN78_13165 IPR003593 AAA+ ATPase domain BEN78_13165 IPR011006 CheY-like superfamily BEN78_13165 IPR009057 Homeobox-like domain superfamily BEN78_13165 IPR025944 Sigma-54 interaction domain, conserved site BEN78_13165 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_13165 IPR001789 Signal transduction response regulator, receiver domain BEN78_13165 IPR002078 RNA polymerase sigma factor 54 interaction domain BEN78_13165 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BEN78_13165 IPR002197 DNA binding HTH domain, Fis-type BEN78_13180 IPR002201 Glycosyl transferase, family 9 BEN78_13185 IPR011009 Protein kinase-like domain superfamily BEN78_13185 IPR022826 3-deoxy-D-manno-octulosonic acid kinase BEN78_13190 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN78_13190 IPR013471 Ribonuclease Z/BN BEN78_13190 IPR001279 Metallo-beta-lactamase BEN78_13195 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site BEN78_13195 IPR013483 Molybdenum cofactor biosynthesis protein A BEN78_13195 IPR006638 Elp3/MiaB/NifB BEN78_13195 IPR007197 Radical SAM BEN78_13195 IPR013785 Aldolase-type TIM barrel BEN78_13195 IPR010505 Molybdenum cofactor synthesis C-terminal BEN78_13205 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain BEN78_13205 IPR023045 Molybdenum cofactor biosynthesis C BEN78_13205 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily BEN78_13225 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site BEN78_13225 IPR027399 Alcohol dehydrogenase GroES-associated BEN78_13225 IPR013154 Alcohol dehydrogenase, N-terminal BEN78_13225 IPR036291 NAD(P)-binding domain superfamily BEN78_13225 IPR011032 GroES-like superfamily BEN78_13225 IPR013149 Alcohol dehydrogenase, C-terminal BEN78_13255 IPR041679 DNA2/NAM7 helicase-like, AAA domain BEN78_13255 IPR041677 DNA2/NAM7 helicase, AAA domain BEN78_13255 IPR025103 Protein of unknown function DUF4011 BEN78_13255 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_13255 IPR041679 DNA2/NAM7 helicase-like, AAA domain BEN78_13255 IPR041677 DNA2/NAM7 helicase, AAA domain BEN78_13255 IPR025103 Protein of unknown function DUF4011 BEN78_13255 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_13265 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_13265 IPR021029 DNA polymerase III, tau subunit, domain V BEN78_13265 IPR012763 DNA polymerase III, subunit gamma/ tau BEN78_13265 IPR022754 DNA polymerase III, gamma subunit, domain III BEN78_13265 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily BEN78_13265 IPR003593 AAA+ ATPase domain BEN78_13265 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal BEN78_13265 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV BEN78_13265 IPR001270 ClpA/B family BEN78_13270 IPR004401 Nucleoid-associated protein YbaB/EbfC family BEN78_13270 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily BEN78_13275 IPR023627 Recombination protein RecR BEN78_13275 IPR023628 Recombination protein RecR, C4-type zinc finger BEN78_13275 IPR015967 Recombination protein RecR, conserved site BEN78_13275 IPR034137 RecR, TOPRIM domain BEN78_13275 IPR006171 TOPRIM domain BEN78_13275 IPR000093 DNA recombination protein RecR BEN78_13280 IPR036265 HIT-like superfamily BEN78_13280 IPR011146 HIT-like domain BEN78_13280 IPR001310 Histidine triad (HIT) protein BEN78_13280 IPR019808 Histidine triad, conserved site BEN78_13290 IPR038765 Papain-like cysteine peptidase superfamily BEN78_13290 IPR021878 Protein-glutamine gamma-glutamyltransferase TgpA, N-terminal BEN78_13290 IPR002931 Transglutaminase-like BEN78_13290 IPR025403 Domain of unknown function DUF4129 BEN78_13300 IPR041628 ChlI/MoxR, AAA lid domain BEN78_13300 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_13300 IPR011703 ATPase, AAA-3 BEN78_13310 IPR001110 Uncharacterised protein family UPF0012, conserved site BEN78_13310 IPR036526 Carbon-nitrogen hydrolase superfamily BEN78_13310 IPR003010 Carbon-nitrogen hydrolase BEN78_13315 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain BEN78_13315 IPR020103 Pseudouridine synthase, catalytic domain superfamily BEN78_13315 IPR006145 Pseudouridine synthase, RsuA/RluA BEN78_13315 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F BEN78_13315 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site BEN78_13315 IPR002942 RNA-binding S4 domain BEN78_13315 IPR036986 RNA-binding S4 domain superfamily BEN78_13320 IPR005234 Chromosome segregation/condensation protein ScpB BEN78_13320 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_13320 IPR036390 Winged helix DNA-binding domain superfamily BEN78_13325 IPR003768 Segregation and condensation protein A BEN78_13330 IPR006377 Catabolite control protein A BEN78_13330 IPR028082 Periplasmic binding protein-like I BEN78_13330 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BEN78_13330 IPR000843 LacI-type HTH domain BEN78_13350 IPR035906 MetI-like superfamily BEN78_13350 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BEN78_13355 IPR035906 MetI-like superfamily BEN78_13355 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BEN78_13380 IPR002429 Cytochrome c oxidase subunit II-like C-terminal BEN78_13380 IPR041114 Nitrous oxide reductase, propeller repeat 1 BEN78_13380 IPR008972 Cupredoxin BEN78_13380 IPR041142 Nitrous oxide reductase, propeller repeat 2 BEN78_13380 IPR011045 Nitrous oxide reductase, N-terminal BEN78_13380 IPR023644 Nitrous-oxide reductase BEN78_13380 IPR015943 WD40/YVTN repeat-like-containing domain superfamily BEN78_13380 IPR006311 Twin-arginine translocation pathway, signal sequence BEN78_13380 IPR028096 EfeO-type cupredoxin-like domain BEN78_13380 IPR034205 Nitrous-oxide reductase, C-terminal BEN78_13385 IPR009056 Cytochrome c-like domain BEN78_13385 IPR036909 Cytochrome c-like domain superfamily BEN78_13385 IPR002323 Cytochrome c, class IE BEN78_13390 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BEN78_13390 IPR007329 FMN-binding BEN78_13390 IPR011399 Nitrous oxide reductase expression regulator NosR BEN78_13395 IPR006626 Parallel beta-helix repeat BEN78_13395 IPR012334 Pectin lyase fold BEN78_13395 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain BEN78_13395 IPR006633 Carbohydrate-binding/sugar hydrolysis domain BEN78_13395 IPR011050 Pectin lyase fold/virulence factor BEN78_13395 IPR026464 Nitrous oxide reductase family maturation protein NosD BEN78_13395 IPR022441 Parallel beta-helix repeat-2 BEN78_13400 IPR003593 AAA+ ATPase domain BEN78_13400 IPR003439 ABC transporter-like BEN78_13400 IPR017871 ABC transporter, conserved site BEN78_13400 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_13405 IPR032688 ABC-2 family transporter protein BEN78_13410 IPR008719 Nitrous oxide reductase accessory protein NosL BEN78_13420 IPR003374 ApbE-like superfamily BEN78_13420 IPR024932 Flavin transferase ApbE BEN78_13420 IPR042159 Flavin-trafficking protein ApbE BEN78_13425 IPR031337 KDPG/KHG aldolase, active site 1 BEN78_13425 IPR013785 Aldolase-type TIM barrel BEN78_13425 IPR000887 KDPG/KHG aldolase BEN78_13425 IPR031338 KDPG/KHG aldolase, active site 2 BEN78_13435 IPR037171 NagB/RpiA transferase-like BEN78_13435 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase BEN78_13435 IPR005900 6-phosphogluconolactonase, DevB-type BEN78_13435 IPR039104 6-Phosphogluconolactonase BEN78_13440 IPR003836 Glucokinase BEN78_13445 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding BEN78_13445 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal BEN78_13445 IPR019796 Glucose-6-phosphate dehydrogenase, active site BEN78_13445 IPR001282 Glucose-6-phosphate dehydrogenase BEN78_13445 IPR036291 NAD(P)-binding domain superfamily BEN78_13450 IPR003593 AAA+ ATPase domain BEN78_13450 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC BEN78_13450 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_13450 IPR040582 MalK, OB fold domain BEN78_13450 IPR008995 Molybdate/tungstate binding, C-terminal BEN78_13450 IPR017871 ABC transporter, conserved site BEN78_13450 IPR003439 ABC transporter-like BEN78_13455 IPR003395 RecF/RecN/SMC, N-terminal BEN78_13455 IPR011890 Structural maintenance of chromosomes protein, prokaryotic BEN78_13455 IPR010935 SMCs flexible hinge BEN78_13455 IPR024704 Structural maintenance of chromosomes protein BEN78_13455 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_13455 IPR036277 SMCs flexible hinge superfamily BEN78_13460 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily BEN78_13460 IPR007449 ZipA, C-terminal FtsZ-binding domain BEN78_13460 IPR011919 Cell division protein ZipA BEN78_13465 IPR037523 Vicinal oxygen chelate (VOC) domain BEN78_13465 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BEN78_13465 IPR037434 Fosfomycin resistance protein FosX BEN78_13465 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN78_13475 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) BEN78_13475 IPR006195 Aminoacyl-tRNA synthetase, class II BEN78_13475 IPR004525 Elongation factor P--(R)-beta-lysine ligase BEN78_13475 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal BEN78_13480 IPR037171 NagB/RpiA transferase-like BEN78_13480 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal BEN78_13480 IPR011559 Initiation factor 2B alpha/beta/delta BEN78_13480 IPR005251 Methylthioribose-1-phosphate isomerase BEN78_13480 IPR000649 Initiation factor 2B-related BEN78_13485 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal BEN78_13485 IPR005743 DNA gyrase, subunit A BEN78_13485 IPR013760 DNA topoisomerase, type IIA-like domain superfamily BEN78_13485 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal BEN78_13485 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta BEN78_13485 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily BEN78_13485 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat BEN78_13505 IPR029039 Flavoprotein-like superfamily BEN78_13505 IPR005025 NADPH-dependent FMN reductase-like BEN78_13505 IPR008254 Flavodoxin/nitric oxide synthase BEN78_13510 IPR036390 Winged helix DNA-binding domain superfamily BEN78_13510 IPR005119 LysR, substrate-binding BEN78_13510 IPR000847 Transcription regulator HTH, LysR BEN78_13510 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_13520 IPR037944 Peroxiredoxin-5-like BEN78_13520 IPR036249 Thioredoxin-like superfamily BEN78_13520 IPR013740 Redoxin BEN78_13520 IPR013766 Thioredoxin domain BEN78_13525 IPR002068 Alpha crystallin/Hsp20 domain BEN78_13525 IPR031107 Small heat shock protein HSP20 BEN78_13525 IPR008978 HSP20-like chaperone BEN78_13530 IPR023859 DNA-binding protein, curved-DNA BEN78_13530 IPR002939 Chaperone DnaJ, C-terminal BEN78_13530 IPR001623 DnaJ domain BEN78_13530 IPR018253 DnaJ domain, conserved site BEN78_13530 IPR008971 HSP40/DnaJ peptide-binding BEN78_13530 IPR036869 Chaperone J-domain superfamily BEN78_13550 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG BEN78_13550 IPR031100 LOG family BEN78_13555 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BEN78_13555 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_13555 IPR023753 FAD/NAD(P)-binding domain BEN78_13555 IPR006258 Dihydrolipoamide dehydrogenase BEN78_13555 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I BEN78_13555 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site BEN78_13555 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily BEN78_13560 IPR006255 Dihydrolipoamide succinyltransferase BEN78_13560 IPR011053 Single hybrid motif BEN78_13560 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily BEN78_13560 IPR036625 E3-binding domain superfamily BEN78_13560 IPR000089 Biotin/lipoyl attachment BEN78_13560 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site BEN78_13560 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain BEN78_13560 IPR004167 Peripheral subunit-binding domain BEN78_13565 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal BEN78_13565 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily BEN78_13565 IPR011603 2-oxoglutarate dehydrogenase E1 component BEN78_13565 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain BEN78_13565 IPR005475 Transketolase-like, pyrimidine-binding domain BEN78_13565 IPR029061 Thiamin diphosphate-binding fold BEN78_13565 IPR001017 Dehydrogenase, E1 component BEN78_13575 IPR039994 JmjC domain-containing BEN78_13575 IPR003347 JmjC domain BEN78_13585 IPR020557 Fumarate lyase, conserved site BEN78_13585 IPR024083 Fumarase/histidase, N-terminal BEN78_13585 IPR000362 Fumarate lyase family BEN78_13585 IPR008948 L-Aspartase-like BEN78_13585 IPR013539 Adenylosuccinate lyase PurB, C-terminal BEN78_13585 IPR004769 Adenylosuccinate lyase BEN78_13585 IPR022761 Fumarate lyase, N-terminal BEN78_13590 IPR005677 Fumarate hydratase, class II BEN78_13590 IPR000362 Fumarate lyase family BEN78_13590 IPR018951 Fumarase C, C-terminal BEN78_13590 IPR020557 Fumarate lyase, conserved site BEN78_13590 IPR022761 Fumarate lyase, N-terminal BEN78_13590 IPR008948 L-Aspartase-like BEN78_13590 IPR024083 Fumarase/histidase, N-terminal BEN78_13620 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_13620 IPR003439 ABC transporter-like BEN78_13620 IPR003593 AAA+ ATPase domain BEN78_13625 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_13625 IPR036390 Winged helix DNA-binding domain superfamily BEN78_13625 IPR000524 Transcription regulator HTH, GntR BEN78_13635 IPR029760 Glutathione peroxidase conserved site BEN78_13635 IPR000889 Glutathione peroxidase BEN78_13635 IPR029759 Glutathione peroxidase active site BEN78_13635 IPR036249 Thioredoxin-like superfamily BEN78_13640 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal BEN78_13640 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily BEN78_13640 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BEN78_13645 IPR008104 Macrophage infectivity potentiator BEN78_13645 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BEN78_13645 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal BEN78_13645 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily BEN78_13650 IPR007236 SlyX BEN78_13665 IPR032466 Metal-dependent hydrolase BEN78_13665 IPR006680 Amidohydrolase-related BEN78_13670 IPR006158 Cobalamin (vitamin B12)-binding domain BEN78_13670 IPR036724 Cobalamin-binding domain superfamily BEN78_13670 IPR011005 Dihydropteroate synthase-like BEN78_13670 IPR003726 Homocysteine-binding domain BEN78_13670 IPR036589 Homocysteine-binding domain superfamily BEN78_13670 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain BEN78_13670 IPR011822 Cobalamin-dependent methionine synthase BEN78_13670 IPR036594 Methionine synthase domain BEN78_13670 IPR004223 Vitamin B12-dependent methionine synthase, activation domain BEN78_13670 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily BEN78_13670 IPR033706 Methionine synthase, B12-binding domain BEN78_13670 IPR000489 Pterin-binding domain BEN78_13675 IPR033706 Methionine synthase, B12-binding domain BEN78_13675 IPR036589 Homocysteine-binding domain superfamily BEN78_13675 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily BEN78_13675 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain BEN78_13675 IPR011005 Dihydropteroate synthase-like BEN78_13675 IPR036594 Methionine synthase domain BEN78_13675 IPR000489 Pterin-binding domain BEN78_13675 IPR004223 Vitamin B12-dependent methionine synthase, activation domain BEN78_13675 IPR011822 Cobalamin-dependent methionine synthase BEN78_13675 IPR006158 Cobalamin (vitamin B12)-binding domain BEN78_13675 IPR036724 Cobalamin-binding domain superfamily BEN78_13675 IPR003726 Homocysteine-binding domain BEN78_13680 IPR005149 Transcription regulator PadR, N-terminal BEN78_13680 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_13680 IPR025714 Methyltransferase domain BEN78_13680 IPR026669 Arsenite methyltransferase-like BEN78_13680 IPR036390 Winged helix DNA-binding domain superfamily BEN78_13680 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_13690 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 BEN78_13690 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain BEN78_13690 IPR036291 NAD(P)-binding domain superfamily BEN78_13690 IPR002912 ACT domain BEN78_13690 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BEN78_13690 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BEN78_13695 IPR016166 FAD-binding domain, PCMH-type BEN78_13695 IPR004490 Glycolate oxidase subunit GlcD BEN78_13695 IPR004113 FAD-linked oxidase, C-terminal BEN78_13695 IPR016164 FAD-linked oxidase-like, C-terminal BEN78_13695 IPR036318 FAD-binding, type PCMH-like superfamily BEN78_13695 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 BEN78_13695 IPR006094 FAD linked oxidase, N-terminal BEN78_13710 IPR008991 Translation protein SH3-like domain superfamily BEN78_13710 IPR014722 Ribosomal protein L2, domain 2 BEN78_13710 IPR013852 Translation elongation factor P/YeiP, conserved site BEN78_13710 IPR001059 Translation elongation factor P/YeiP, central BEN78_13710 IPR011897 Translation elongation factor P-like, YeiP BEN78_13710 IPR013185 Translation elongation factor, KOW-like BEN78_13710 IPR020599 Translation elongation factor P/YeiP BEN78_13710 IPR012340 Nucleic acid-binding, OB-fold BEN78_13710 IPR015365 Elongation factor P, C-terminal BEN78_13720 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_13720 IPR020904 Short-chain dehydrogenase/reductase, conserved site BEN78_13720 IPR036291 NAD(P)-binding domain superfamily BEN78_13730 IPR006073 GTP binding domain BEN78_13730 IPR007167 Ferrous iron transporter FeoA domain BEN78_13730 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_13730 IPR008988 Transcriptional repressor, C-terminal BEN78_13730 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain BEN78_13730 IPR030389 FeoB-type guanine nucleotide-binding (G) domain BEN78_13730 IPR041069 FeoB, cytosolic helical domain BEN78_13730 IPR005225 Small GTP-binding protein domain BEN78_13730 IPR038157 Ferrous iron transporter, core domain BEN78_13730 IPR011640 Ferrous iron transport protein B, C-terminal BEN78_13730 IPR003373 Ferrous iron transport protein B BEN78_13765 IPR020617 Thiolase, C-terminal BEN78_13765 IPR020616 Thiolase, N-terminal BEN78_13765 IPR020613 Thiolase, conserved site BEN78_13765 IPR020615 Thiolase, acyl-enzyme intermediate active site BEN78_13765 IPR016039 Thiolase-like BEN78_13765 IPR002155 Thiolase BEN78_13765 IPR020610 Thiolase, active site BEN78_13770 IPR034061 Autotransporter serine protease peptidase domain BEN78_13770 IPR036709 Autotransporter beta-domain superfamily BEN78_13770 IPR013425 Autotransporter-associated beta strand repeat BEN78_13770 IPR006315 Outer membrane autotransporter barrel BEN78_13770 IPR011050 Pectin lyase fold/virulence factor BEN78_13770 IPR005546 Autotransporter beta-domain BEN78_13770 IPR000209 Peptidase S8/S53 domain BEN78_13770 IPR036852 Peptidase S8/S53 domain superfamily BEN78_13770 IPR022398 Peptidase S8, subtilisin, His-active site BEN78_13770 IPR015500 Peptidase S8, subtilisin-related BEN78_13770 IPR023828 Peptidase S8, subtilisin, Ser-active site BEN78_13775 IPR033524 Leu/Phe/Val dehydrogenases active site BEN78_13775 IPR036291 NAD(P)-binding domain superfamily BEN78_13775 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain BEN78_13775 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal BEN78_13775 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal BEN78_13775 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase BEN78_13780 IPR030871 Cardiolipin synthase C BEN78_13780 IPR001736 Phospholipase D/Transphosphatidylase BEN78_13780 IPR025202 Phospholipase D-like domain BEN78_13785 IPR003770 Endolytic murein transglycosylase BEN78_13790 IPR039430 Thymidylate kinase-like domain BEN78_13790 IPR018094 Thymidylate kinase BEN78_13790 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_13795 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_13795 IPR015199 DNA polymerase III, delta subunit, C-terminal BEN78_13795 IPR004622 DNA polymerase III, delta prime subunit BEN78_13815 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BEN78_13815 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal BEN78_13815 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site BEN78_13815 IPR001753 Enoyl-CoA hydratase/isomerase BEN78_13815 IPR012802 Fatty oxidation complex, alpha subunit FadJ BEN78_13815 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding BEN78_13815 IPR029045 ClpP/crotonase-like domain superfamily BEN78_13815 IPR036291 NAD(P)-binding domain superfamily BEN78_13815 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site BEN78_13820 IPR039425 RNA polymerase sigma-70 like BEN78_13820 IPR014284 RNA polymerase sigma-70 like domain BEN78_13820 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site BEN78_13820 IPR007627 RNA polymerase sigma-70 region 2 BEN78_13820 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 BEN78_13820 IPR014286 RNA polymerase sigma-70 RpoE type BEN78_13820 IPR013325 RNA polymerase sigma factor, region 2 BEN78_13820 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN78_13820 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_13830 IPR001478 PDZ domain BEN78_13830 IPR036034 PDZ superfamily BEN78_13830 IPR011782 Peptidase S1C, Do BEN78_13830 IPR009003 Peptidase S1, PA clan BEN78_13830 IPR001940 Peptidase S1C BEN78_13835 IPR000795 Transcription factor, GTP-binding domain BEN78_13835 IPR000640 Elongation factor EFG, domain V-like BEN78_13835 IPR006297 Elongation factor 4 BEN78_13835 IPR009000 Translation protein, beta-barrel domain superfamily BEN78_13835 IPR005225 Small GTP-binding protein domain BEN78_13835 IPR035647 EF-G domain III/V-like BEN78_13835 IPR013842 GTP-binding protein LepA, C-terminal BEN78_13835 IPR004161 Translation elongation factor EFTu-like, domain 2 BEN78_13835 IPR031157 Tr-type G domain, conserved site BEN78_13835 IPR038363 LepA, C-terminal domain superfamily BEN78_13835 IPR035654 Elongation factor 4, domain IV BEN78_13835 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_13840 IPR019758 Peptidase S26A, signal peptidase I, conserved site BEN78_13840 IPR036286 LexA/Signal peptidase-like superfamily BEN78_13840 IPR019757 Peptidase S26A, signal peptidase I, lysine active site BEN78_13840 IPR019756 Peptidase S26A, signal peptidase I, serine active site BEN78_13840 IPR019533 Peptidase S26 BEN78_13840 IPR000223 Peptidase S26A, signal peptidase I BEN78_13850 IPR000999 Ribonuclease III domain BEN78_13850 IPR036389 Ribonuclease III, endonuclease domain superfamily BEN78_13850 IPR014720 Double-stranded RNA-binding domain BEN78_13850 IPR011907 Ribonuclease III BEN78_13855 IPR005225 Small GTP-binding protein domain BEN78_13855 IPR009019 K homology domain superfamily, prokaryotic type BEN78_13855 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_13855 IPR004044 K Homology domain, type 2 BEN78_13855 IPR030388 Era-type guanine nucleotide-binding (G) domain BEN78_13855 IPR005662 GTP-binding protein Era BEN78_13855 IPR006073 GTP binding domain BEN78_13855 IPR015946 K homology domain-like, alpha/beta BEN78_13865 IPR022572 DNA replication/recombination mediator RecO, N-terminal BEN78_13865 IPR003717 Recombination protein O, RecO BEN78_13865 IPR012340 Nucleic acid-binding, OB-fold BEN78_13885 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD BEN78_13885 IPR030390 RNA methyltransferase TrmA, active site BEN78_13885 IPR030391 RNA methyltransferase TrmA, conserved site BEN78_13885 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_13885 IPR002792 TRAM domain BEN78_13885 IPR010280 (Uracil-5)-methyltransferase family BEN78_13885 IPR012340 Nucleic acid-binding, OB-fold BEN78_13895 IPR036249 Thioredoxin-like superfamily BEN78_13895 IPR001853 DSBA-like thioredoxin domain BEN78_13900 IPR017853 Glycoside hydrolase superfamily BEN78_13900 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily BEN78_13900 IPR019800 Glycoside hydrolase, family 3, active site BEN78_13900 IPR022956 Beta-hexosaminidase, bacterial BEN78_13900 IPR001764 Glycoside hydrolase, family 3, N-terminal BEN78_13910 IPR010044 Methylthioadenosine phosphorylase (MTAP) BEN78_13910 IPR000845 Nucleoside phosphorylase domain BEN78_13910 IPR018099 Purine phosphorylase, family 2, conserved site BEN78_13910 IPR035994 Nucleoside phosphorylase superfamily BEN78_13915 IPR012340 Nucleic acid-binding, OB-fold BEN78_13915 IPR002059 Cold-shock protein, DNA-binding BEN78_13915 IPR012156 Cold shock, CspA BEN78_13915 IPR011129 Cold shock domain BEN78_13915 IPR019844 Cold-shock (CSD) domain BEN78_13920 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BEN78_13920 IPR001647 DNA-binding HTH domain, TetR-type BEN78_13920 IPR009057 Homeobox-like domain superfamily BEN78_13920 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BEN78_13925 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_13925 IPR036291 NAD(P)-binding domain superfamily BEN78_13930 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal BEN78_13930 IPR016169 FAD-binding, type PCMH, subdomain 2 BEN78_13930 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 BEN78_13930 IPR036318 FAD-binding, type PCMH-like superfamily BEN78_13930 IPR006094 FAD linked oxidase, N-terminal BEN78_13930 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 BEN78_13930 IPR012256 D-lactate dehydrogenase BEN78_13930 IPR016167 FAD-binding, type PCMH, subdomain 1 BEN78_13930 IPR016166 FAD-binding domain, PCMH-type BEN78_13930 IPR016164 FAD-linked oxidase-like, C-terminal BEN78_13935 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site BEN78_13935 IPR020920 L-lactate dehydrogenase, bacterial BEN78_13935 IPR037396 FMN hydroxy acid dehydrogenase domain BEN78_13935 IPR000262 FMN-dependent dehydrogenase BEN78_13935 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent BEN78_13935 IPR013785 Aldolase-type TIM barrel BEN78_13940 IPR011711 GntR, C-terminal BEN78_13940 IPR008920 Transcription regulator FadR/GntR, C-terminal BEN78_13940 IPR036390 Winged helix DNA-binding domain superfamily BEN78_13940 IPR000524 Transcription regulator HTH, GntR BEN78_13940 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_13945 IPR036390 Winged helix DNA-binding domain superfamily BEN78_13945 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_13945 IPR000847 Transcription regulator HTH, LysR BEN78_13945 IPR005119 LysR, substrate-binding BEN78_13950 IPR003680 Flavodoxin-like fold BEN78_13950 IPR029039 Flavoprotein-like superfamily BEN78_13960 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_13960 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_13960 IPR010101 TonB-dependent vitamin B12 transporter BtuB BEN78_13960 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_13960 IPR012910 TonB-dependent receptor, plug domain BEN78_13960 IPR039426 Vitamin B12 transporter BtuB-like BEN78_13970 IPR000614 Free Met sulfoxide reductase conserved site BEN78_13970 IPR003018 GAF domain BEN78_13970 IPR029016 GAF-like domain superfamily BEN78_13975 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_13975 IPR004472 Dethiobiotin synthase BioD BEN78_13980 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN78_13980 IPR001036 Acriflavin resistance protein BEN78_13985 IPR006143 RND efflux pump, membrane fusion protein BEN78_13985 IPR022824 Multidrug resistance protein MdtA BEN78_13985 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BEN78_14000 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN78_14000 IPR001036 Acriflavin resistance protein BEN78_14000 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 BEN78_14005 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_14005 IPR002938 FAD-binding domain BEN78_14010 IPR006089 Acyl-CoA dehydrogenase, conserved site BEN78_14010 IPR034184 Putative acyl-CoA dehydrogenase AidB BEN78_14010 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain BEN78_14010 IPR041504 Adaptive response protein AidB, N-terminal BEN78_14010 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily BEN78_14010 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal BEN78_14010 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal BEN78_14015 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_14015 IPR001845 HTH ArsR-type DNA-binding domain BEN78_14015 IPR011991 ArsR-like helix-turn-helix domain BEN78_14015 IPR036390 Winged helix DNA-binding domain superfamily BEN78_14025 IPR003439 ABC transporter-like BEN78_14025 IPR036640 ABC transporter type 1, transmembrane domain superfamily BEN78_14025 IPR011527 ABC transporter type 1, transmembrane domain BEN78_14025 IPR017871 ABC transporter, conserved site BEN78_14025 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_14025 IPR003593 AAA+ ATPase domain BEN78_14030 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site BEN78_14030 IPR020568 Ribosomal protein S5 domain 2-type fold BEN78_14030 IPR036956 Impact, N-terminal domain superfamily BEN78_14030 IPR001498 Impact, N-terminal BEN78_14030 IPR035647 EF-G domain III/V-like BEN78_14030 IPR023582 Impact family BEN78_14040 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_14040 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site BEN78_14040 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 BEN78_14040 IPR014284 RNA polymerase sigma-70 like domain BEN78_14040 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN78_14040 IPR007627 RNA polymerase sigma-70 region 2 BEN78_14040 IPR039425 RNA polymerase sigma-70 like BEN78_14040 IPR013325 RNA polymerase sigma factor, region 2 BEN78_14045 IPR035919 EAL domain superfamily BEN78_14045 IPR001633 EAL domain BEN78_14045 IPR005330 MHYT domain BEN78_14045 IPR000160 GGDEF domain BEN78_14045 IPR029787 Nucleotide cyclase BEN78_14050 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal BEN78_14050 IPR023753 FAD/NAD(P)-binding domain BEN78_14050 IPR013785 Aldolase-type TIM barrel BEN78_14050 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_14055 IPR020458 Zinc finger, DksA/TraR C4-type conserved site BEN78_14055 IPR000962 Zinc finger, DksA/TraR C4-type BEN78_14055 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria BEN78_14060 IPR006175 YjgF/YER057c/UK114 family BEN78_14060 IPR019897 RidA, conserved site BEN78_14060 IPR035959 RutC-like superfamily BEN78_14060 IPR035709 RutC family, YoaB-like BEN78_14090 IPR013130 Ferric reductase transmembrane component-like domain BEN78_14090 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ BEN78_14095 IPR000572 Oxidoreductase, molybdopterin-binding domain BEN78_14095 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily BEN78_14095 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP BEN78_14100 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BEN78_14100 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_14100 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BEN78_14100 IPR022278 Phosphoserine aminotransferase BEN78_14100 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BEN78_14100 IPR000192 Aminotransferase class V domain BEN78_14105 IPR002701 Chorismate mutase II, prokaryotic-type BEN78_14105 IPR036979 Chorismate mutase domain superfamily BEN78_14105 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain BEN78_14105 IPR001086 Prephenate dehydratase BEN78_14105 IPR018528 Prephenate dehydratase, conserved site BEN78_14105 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase BEN78_14105 IPR002912 ACT domain BEN78_14105 IPR036263 Chorismate mutase type II superfamily BEN78_14110 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta BEN78_14110 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site BEN78_14110 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase BEN78_14110 IPR001986 Enolpyruvate transferase domain BEN78_14110 IPR036968 Enolpyruvate transferase domain superfamily BEN78_14115 IPR006260 TonB/TolA, C-terminal BEN78_14115 IPR037682 TonB, C-terminal BEN78_14125 IPR002317 Serine-tRNA ligase, type1 BEN78_14125 IPR006195 Aminoacyl-tRNA synthetase, class II BEN78_14125 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily BEN78_14125 IPR033729 Serine-tRNA ligase catalytic core domain BEN78_14125 IPR015866 Serine-tRNA synthetase, type1, N-terminal BEN78_14125 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) BEN78_14125 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm BEN78_14130 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_14130 IPR000847 Transcription regulator HTH, LysR BEN78_14130 IPR005119 LysR, substrate-binding BEN78_14130 IPR036390 Winged helix DNA-binding domain superfamily BEN78_14145 IPR003810 Putative manganese efflux pump BEN78_14145 IPR022929 Putative manganese efflux pump MntP BEN78_14165 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BEN78_14165 IPR012292 Globin/Protoglobin BEN78_14165 IPR039379 Protoglobin, globin sensor domain BEN78_14165 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BEN78_14165 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BEN78_14165 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_14165 IPR009050 Globin-like superfamily BEN78_14165 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_14165 IPR005467 Histidine kinase domain BEN78_14170 IPR000037 SsrA-binding protein BEN78_14170 IPR020081 SsrA-binding protein, conserved site BEN78_14170 IPR023620 Small protein B BEN78_14180 IPR037021 RnfH superfamily BEN78_14180 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp BEN78_14180 IPR005346 RnfH protein BEN78_14185 IPR026592 Outer membrane protein assembly factor BamE BEN78_14185 IPR037873 BamE-like BEN78_14185 IPR007450 Lipoprotein SmpA/OmlA BEN78_14190 IPR036390 Winged helix DNA-binding domain superfamily BEN78_14190 IPR002481 Ferric-uptake regulator BEN78_14190 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_14195 IPR003395 RecF/RecN/SMC, N-terminal BEN78_14195 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_14195 IPR004604 DNA recombination/repair protein RecN BEN78_14195 IPR038729 Rad50/SbcC-type AAA domain BEN78_14200 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain BEN78_14200 IPR029016 GAF-like domain superfamily BEN78_14200 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily BEN78_14200 IPR036390 Winged helix DNA-binding domain superfamily BEN78_14200 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_14200 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal BEN78_14200 IPR002571 Heat-inducible transcription repressor HrcA BEN78_14205 IPR009012 GrpE nucleotide exchange factor, head BEN78_14205 IPR000740 GrpE nucleotide exchange factor BEN78_14205 IPR013805 GrpE nucleotide exchange factor, coiled-coil BEN78_14210 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily BEN78_14210 IPR018181 Heat shock protein 70, conserved site BEN78_14210 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily BEN78_14210 IPR012725 Chaperone DnaK BEN78_14210 IPR013126 Heat shock protein 70 family BEN78_14215 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily BEN78_14215 IPR001305 Heat shock protein DnaJ, cysteine-rich domain BEN78_14215 IPR008971 HSP40/DnaJ peptide-binding BEN78_14215 IPR001623 DnaJ domain BEN78_14215 IPR002939 Chaperone DnaJ, C-terminal BEN78_14215 IPR012724 Chaperone DnaJ BEN78_14215 IPR036869 Chaperone J-domain superfamily BEN78_14220 IPR022663 Dihydrodipicolinate reductase, C-terminal BEN78_14220 IPR036291 NAD(P)-binding domain superfamily BEN78_14220 IPR022664 Dihydrodipicolinate reductase, conserved site BEN78_14220 IPR000846 Dihydrodipicolinate reductase, N-terminal BEN78_14220 IPR023940 Dihydrodipicolinate reductase BEN78_14225 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain BEN78_14225 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily BEN78_14225 IPR029062 Class I glutamine amidotransferase-like BEN78_14225 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain BEN78_14225 IPR006274 Carbamoyl-phosphate synthase, small subunit BEN78_14225 IPR017926 Glutamine amidotransferase BEN78_14235 IPR016185 Pre-ATP-grasp domain superfamily BEN78_14235 IPR011607 Methylglyoxal synthase-like domain BEN78_14235 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain BEN78_14235 IPR036914 Methylglyoxal synthase-like domain superfamily BEN78_14235 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain BEN78_14235 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain BEN78_14235 IPR006195 Aminoacyl-tRNA synthetase, class II BEN78_14235 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain BEN78_14235 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily BEN78_14235 IPR011761 ATP-grasp fold BEN78_14235 IPR006275 Carbamoyl-phosphate synthase, large subunit BEN78_14240 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal BEN78_14240 IPR006359 Transcription elongation factor GreA BEN78_14240 IPR028624 Transcription elongation factor GreA/GreB BEN78_14240 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal BEN78_14240 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily BEN78_14240 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily BEN78_14240 IPR018151 Transcription elongation factor, GreA/GreB, conserved site BEN78_14240 IPR023459 Transcription elongation factor GreA/GreB family BEN78_14250 IPR003156 DHHA1 domain BEN78_14250 IPR038763 DHH phosphoesterase superfamily BEN78_14250 IPR001667 DDH domain BEN78_14250 IPR041122 RecJ, OB domain BEN78_14250 IPR004610 Bacterial RecJ exonuclease BEN78_14260 IPR000352 Peptide chain release factor class I BEN78_14260 IPR005139 Peptide chain release factor BEN78_14260 IPR004374 Peptide chain release factor 2 BEN78_14265 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type BEN78_14265 IPR012340 Nucleic acid-binding, OB-fold BEN78_14265 IPR002313 Lysine-tRNA ligase, class II BEN78_14265 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) BEN78_14265 IPR006195 Aminoacyl-tRNA synthetase, class II BEN78_14265 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal BEN78_14270 IPR011006 CheY-like superfamily BEN78_14270 IPR037522 HD-GYP domain BEN78_14270 IPR001789 Signal transduction response regulator, receiver domain BEN78_14270 IPR003607 HD/PDEase domain BEN78_14275 IPR001789 Signal transduction response regulator, receiver domain BEN78_14275 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain BEN78_14275 IPR011006 CheY-like superfamily BEN78_14275 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_14275 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BEN78_14275 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BEN78_14275 IPR005467 Histidine kinase domain BEN78_14275 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_14275 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BEN78_14275 IPR036641 HPT domain superfamily BEN78_14280 IPR029045 ClpP/crotonase-like domain superfamily BEN78_14280 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site BEN78_14280 IPR001753 Enoyl-CoA hydratase/isomerase BEN78_14285 IPR020845 AMP-binding, conserved site BEN78_14285 IPR042099 AMP-dependent synthetase-like superfamily BEN78_14285 IPR025110 AMP-binding enzyme, C-terminal domain BEN78_14285 IPR000873 AMP-dependent synthetase/ligase BEN78_14290 IPR018136 Aconitase family, 4Fe-4S cluster binding site BEN78_14290 IPR036008 Aconitase, iron-sulfur domain BEN78_14290 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain BEN78_14290 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain BEN78_14290 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel BEN78_14290 IPR006249 Aconitase/Iron-responsive element-binding protein 2 BEN78_14295 IPR005119 LysR, substrate-binding BEN78_14295 IPR000847 Transcription regulator HTH, LysR BEN78_14295 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_14295 IPR036390 Winged helix DNA-binding domain superfamily BEN78_14300 IPR007400 PrpF protein BEN78_14310 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_14310 IPR003593 AAA+ ATPase domain BEN78_14310 IPR003439 ABC transporter-like BEN78_14315 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BEN78_14315 IPR035906 MetI-like superfamily BEN78_14335 IPR018136 Aconitase family, 4Fe-4S cluster binding site BEN78_14335 IPR004406 Aconitase B BEN78_14335 IPR015933 Aconitase B, HEAT-like domain BEN78_14335 IPR036288 Aconitase B, HEAT-like domain superfamily BEN78_14335 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 BEN78_14335 IPR015929 Aconitase B, swivel BEN78_14335 IPR036008 Aconitase, iron-sulfur domain BEN78_14335 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel BEN78_14335 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain BEN78_14335 IPR015932 Aconitase, domain 2 BEN78_14355 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase BEN78_14355 IPR011006 CheY-like superfamily BEN78_14355 IPR035909 Methylesterase CheB, C-terminal BEN78_14355 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type BEN78_14355 IPR001789 Signal transduction response regulator, receiver domain BEN78_14360 IPR038592 CheD-like superfamily BEN78_14360 IPR005659 Chemoreceptor glutamine deamidase CheD BEN78_14360 IPR011324 Cytotoxic necrotizing factor-like, catalytic BEN78_14365 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_14365 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily BEN78_14365 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal BEN78_14365 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal BEN78_14365 IPR000780 MCP methyltransferase, CheR-type BEN78_14365 IPR026024 Chemotaxis protein methyltransferase CheR BEN78_14380 IPR002545 CheW-like domain BEN78_14380 IPR036061 CheW-like domain superfamily BEN78_14380 IPR039315 Chemotaxis protein CheW BEN78_14385 IPR009875 PilZ domain BEN78_14385 IPR023787 Type III secretion system flagellar brake protein YcgR BEN78_14385 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal BEN78_14390 IPR004090 Chemotaxis methyl-accepting receptor BEN78_14390 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding BEN78_14390 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site BEN78_14390 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily BEN78_14390 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BEN78_14390 IPR003660 HAMP domain BEN78_14395 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily BEN78_14395 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site BEN78_14395 IPR003660 HAMP domain BEN78_14395 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BEN78_14395 IPR004090 Chemotaxis methyl-accepting receptor BEN78_14395 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding BEN78_14405 IPR011006 CheY-like superfamily BEN78_14405 IPR001789 Signal transduction response regulator, receiver domain BEN78_14415 IPR039315 Chemotaxis protein CheW BEN78_14415 IPR036061 CheW-like domain superfamily BEN78_14415 IPR002545 CheW-like domain BEN78_14420 IPR025669 AAA domain BEN78_14420 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_14430 IPR002898 MotA/TolQ/ExbB proton channel BEN78_14430 IPR000540 Flagellar motor protein MotA, conserved site BEN78_14435 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BEN78_14435 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain BEN78_14435 IPR036641 HPT domain superfamily BEN78_14435 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BEN78_14435 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily BEN78_14435 IPR004105 Histidine kinase CheA-like, homodimeric domain BEN78_14435 IPR005467 Histidine kinase domain BEN78_14435 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding BEN78_14435 IPR036061 CheW-like domain superfamily BEN78_14435 IPR002545 CheW-like domain BEN78_14435 IPR035891 CheY-binding domain of CheA BEN78_14435 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_14435 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_14435 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily BEN78_14445 IPR001789 Signal transduction response regulator, receiver domain BEN78_14445 IPR011006 CheY-like superfamily BEN78_14450 IPR028617 RNA polymerase sigma factor FliA BEN78_14450 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN78_14450 IPR012845 RNA polymerase sigma factor, FliA/WhiG BEN78_14450 IPR007630 RNA polymerase sigma-70 region 4 BEN78_14450 IPR013325 RNA polymerase sigma factor, region 2 BEN78_14450 IPR007627 RNA polymerase sigma-70 region 2 BEN78_14450 IPR007624 RNA polymerase sigma-70 region 3 BEN78_14450 IPR000943 RNA polymerase sigma-70 BEN78_14450 IPR014284 RNA polymerase sigma-70 like domain BEN78_14455 IPR025501 ATP binding protein MinD BEN78_14455 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_14455 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 BEN78_14460 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_14460 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain BEN78_14460 IPR003593 AAA+ ATPase domain BEN78_14460 IPR020006 Flagellar biosynthesis protein FlhF BEN78_14465 IPR006301 Flagellar biosynthesis protein FlhA BEN78_14465 IPR042194 FHIPEP, domain 1 BEN78_14465 IPR001712 Type III secretion system FHIPEP BEN78_14465 IPR042193 FHIPEP, domain 3 BEN78_14465 IPR025505 FHIPEP conserved site BEN78_14465 IPR042196 FHIPEP, domain 4 BEN78_14470 IPR006136 Flagellar biosynthetic protein FlhB BEN78_14470 IPR006135 Type III secretion system substrate exporter BEN78_14470 IPR029025 Type III secretion system substrate exporter, C-terminal BEN78_14475 IPR002010 Type III secretion system inner membrane R protein BEN78_14475 IPR006303 Flagellar biosynthesis protein FliR BEN78_14480 IPR006305 Flagellar biosynthesis protein FliQ BEN78_14480 IPR002191 Bacterial export protein family 3 BEN78_14485 IPR005837 Flagellar transport protein FliP BEN78_14485 IPR005838 Type III secretion system inner membrane P protein BEN78_14490 IPR022781 Flagellar biosynthesis protein, FliO BEN78_14495 IPR036429 SpoA-like superfamily BEN78_14495 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb BEN78_14495 IPR012826 Flagellar motor switch FliN BEN78_14495 IPR001543 Surface presentation of antigen (SpoA) BEN78_14500 IPR001543 Surface presentation of antigen (SpoA) BEN78_14500 IPR036429 SpoA-like superfamily BEN78_14500 IPR028976 CheC-like superfamily BEN78_14500 IPR001689 Flagellar motor switch protein FliM BEN78_14520 IPR032463 ATPase, type III secretion system, FliI BEN78_14520 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_14520 IPR040627 T3SS EscN ATPase, C-terminal BEN78_14520 IPR020005 Flagellar export ATPase FliI, clade 1 BEN78_14520 IPR005714 ATPase, type III secretion system, FliI/YscN BEN78_14520 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain BEN78_14520 IPR003593 AAA+ ATPase domain BEN78_14520 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site BEN78_14530 IPR032779 Flagellar motor switch protein FliG, middle domain BEN78_14530 IPR023087 Flagellar motor switch protein FliG, C-terminal BEN78_14530 IPR011002 Flagellar motor switch protein FliG, alpha-helical BEN78_14530 IPR028263 Flagellar motor switch protein FliG, N-terminal domain BEN78_14530 IPR000090 Flagellar motor switch protein FliG BEN78_14535 IPR000067 Flagellar M-ring protein FliF BEN78_14535 IPR006182 Secretory protein YscJ/FliF BEN78_14535 IPR013556 Flagellar M-ring C-terminal BEN78_14540 IPR001624 Flagellar hook-basal body complex protein FliE BEN78_14545 IPR025944 Sigma-54 interaction domain, conserved site BEN78_14545 IPR002078 RNA polymerase sigma factor 54 interaction domain BEN78_14545 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_14545 IPR002197 DNA binding HTH domain, Fis-type BEN78_14545 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BEN78_14545 IPR001789 Signal transduction response regulator, receiver domain BEN78_14545 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BEN78_14545 IPR009057 Homeobox-like domain superfamily BEN78_14545 IPR011006 CheY-like superfamily BEN78_14545 IPR003593 AAA+ ATPase domain BEN78_14550 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type BEN78_14550 IPR001789 Signal transduction response regulator, receiver domain BEN78_14550 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase BEN78_14550 IPR011006 CheY-like superfamily BEN78_14550 IPR035909 Methylesterase CheB, C-terminal BEN78_14555 IPR007634 RNA polymerase sigma factor 54, DNA-binding BEN78_14555 IPR007046 RNA polymerase sigma factor 54, core-binding domain BEN78_14555 IPR000394 RNA polymerase sigma factor 54 BEN78_14555 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily BEN78_14560 IPR001789 Signal transduction response regulator, receiver domain BEN78_14560 IPR011006 CheY-like superfamily BEN78_14560 IPR000792 Transcription regulator LuxR, C-terminal BEN78_14560 IPR016032 Signal transduction response regulator, C-terminal effector BEN78_14575 IPR003713 Flagellar protein FliS BEN78_14575 IPR036584 Flagellar protein FliS superfamily BEN78_14595 IPR013384 Flagellar hook-associated protein 3 BEN78_14595 IPR001029 Flagellin, D0/D1 domain BEN78_14600 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BEN78_14600 IPR002371 Flagellar hook-associated protein 1 BEN78_14600 IPR001444 Flagellar basal body rod protein, N-terminal BEN78_14605 IPR019301 Flagellar protein FlgJ, N-terminal BEN78_14605 IPR013377 Peptidoglycan hydrolase FlgJ BEN78_14605 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain BEN78_14610 IPR001782 Flagellar P-ring protein BEN78_14615 IPR000527 Flagellar L-ring protein BEN78_14620 IPR012834 Flagellar basal-body rod FlgG BEN78_14620 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like BEN78_14620 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BEN78_14620 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BEN78_14620 IPR001444 Flagellar basal body rod protein, N-terminal BEN78_14620 IPR019776 Flagellar basal body rod protein, conserved site BEN78_14625 IPR001444 Flagellar basal body rod protein, N-terminal BEN78_14625 IPR019776 Flagellar basal body rod protein, conserved site BEN78_14625 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BEN78_14625 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BEN78_14625 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like BEN78_14635 IPR005648 Flagellar hook capping protein BEN78_14635 IPR025965 FlgD Ig-like domain BEN78_14635 IPR025963 FlgD Tudor-like domain BEN78_14640 IPR006299 Flagellar basal-body rod protein FlgC BEN78_14640 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BEN78_14640 IPR019776 Flagellar basal body rod protein, conserved site BEN78_14640 IPR001444 Flagellar basal body rod protein, N-terminal BEN78_14645 IPR001444 Flagellar basal body rod protein, N-terminal BEN78_14645 IPR019776 Flagellar basal body rod protein, conserved site BEN78_14645 IPR006300 Flagellar basal-body rod protein FlgB BEN78_14650 IPR024181 Chemotaxis response regulator CheV BEN78_14650 IPR036061 CheW-like domain superfamily BEN78_14650 IPR011006 CheY-like superfamily BEN78_14650 IPR001789 Signal transduction response regulator, receiver domain BEN78_14650 IPR002545 CheW-like domain BEN78_14670 IPR005467 Histidine kinase domain BEN78_14670 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_14670 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_14670 IPR011006 CheY-like superfamily BEN78_14670 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BEN78_14670 IPR000014 PAS domain BEN78_14670 IPR035965 PAS domain superfamily BEN78_14670 IPR013656 PAS fold-4 BEN78_14670 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BEN78_14670 IPR001789 Signal transduction response regulator, receiver domain BEN78_14670 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BEN78_14675 IPR029787 Nucleotide cyclase BEN78_14675 IPR005330 MHYT domain BEN78_14675 IPR000160 GGDEF domain BEN78_14675 IPR035919 EAL domain superfamily BEN78_14675 IPR001633 EAL domain BEN78_14680 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain BEN78_14680 IPR007895 MASE1 BEN78_14680 IPR005467 Histidine kinase domain BEN78_14680 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_14680 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_14685 IPR035919 EAL domain superfamily BEN78_14685 IPR035965 PAS domain superfamily BEN78_14685 IPR029787 Nucleotide cyclase BEN78_14685 IPR005330 MHYT domain BEN78_14685 IPR000160 GGDEF domain BEN78_14685 IPR000014 PAS domain BEN78_14685 IPR001633 EAL domain BEN78_14700 IPR007451 High frequency lysogenization protein HflD BEN78_14700 IPR035932 HflD-like superfamily BEN78_14710 IPR015797 NUDIX hydrolase-like domain superfamily BEN78_14710 IPR020476 NUDIX hydrolase BEN78_14710 IPR033713 Phosphatase NudJ BEN78_14710 IPR000086 NUDIX hydrolase domain BEN78_14710 IPR020084 NUDIX hydrolase, conserved site BEN78_14720 IPR018368 ClpA/B, conserved site 1 BEN78_14720 IPR001270 ClpA/B family BEN78_14720 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA BEN78_14720 IPR004176 Clp, N-terminal BEN78_14720 IPR036628 Clp, N-terminal domain superfamily BEN78_14720 IPR019489 Clp ATPase, C-terminal BEN78_14720 IPR003959 ATPase, AAA-type, core BEN78_14720 IPR003593 AAA+ ATPase domain BEN78_14720 IPR028299 ClpA/B, conserved site 2 BEN78_14720 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_14720 IPR041546 ClpA/ClpB, AAA lid domain BEN78_14725 IPR012340 Nucleic acid-binding, OB-fold BEN78_14725 IPR006196 RNA-binding domain, S1, IF1 type BEN78_14725 IPR022967 RNA-binding domain, S1 BEN78_14725 IPR004368 Translation initiation factor IF-1 BEN78_14730 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase BEN78_14730 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal BEN78_14730 IPR016181 Acyl-CoA N-acyltransferase BEN78_14745 IPR023753 FAD/NAD(P)-binding domain BEN78_14745 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_14745 IPR005982 Thioredoxin reductase BEN78_14745 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site BEN78_14750 IPR041027 FtsK alpha domain BEN78_14750 IPR025199 DNA translocase FtsK, 4TM region BEN78_14750 IPR003593 AAA+ ATPase domain BEN78_14750 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_14750 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_14750 IPR018541 FtsK gamma domain BEN78_14750 IPR002543 FtsK domain BEN78_14750 IPR036390 Winged helix DNA-binding domain superfamily BEN78_14755 IPR004564 Outer membrane lipoprotein carrier protein LolA-like BEN78_14755 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria BEN78_14755 IPR029046 Lipoprotein localisation LolA/LolB/LppX BEN78_14770 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal BEN78_14770 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal BEN78_14770 IPR006359 Transcription elongation factor GreA BEN78_14770 IPR018151 Transcription elongation factor, GreA/GreB, conserved site BEN78_14770 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily BEN78_14770 IPR023459 Transcription elongation factor GreA/GreB family BEN78_14770 IPR028624 Transcription elongation factor GreA/GreB BEN78_14770 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily BEN78_14785 IPR010359 IrrE N-terminal-like domain BEN78_14790 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily BEN78_14790 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain BEN78_14790 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BEN78_14790 IPR001387 Cro/C1-type helix-turn-helix domain BEN78_14835 IPR007939 Copper resistance B precursor BEN78_14840 IPR006376 Copper-resistance protein CopA BEN78_14840 IPR011706 Multicopper oxidase, type 2 BEN78_14840 IPR034279 Copper resistance protein, third cupredoxin domain BEN78_14840 IPR011707 Multicopper oxidase, type 3 BEN78_14840 IPR006311 Twin-arginine translocation pathway, signal sequence BEN78_14840 IPR002355 Multicopper oxidase, copper-binding site BEN78_14840 IPR033138 Multicopper oxidases, conserved site BEN78_14840 IPR001117 Multicopper oxidase, type 1 BEN78_14840 IPR034282 Copper resistance protein CopA, second cupredoxin domain BEN78_14840 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BEN78_14840 IPR008972 Cupredoxin BEN78_14840 IPR034284 Copper resistance protein, first cupredoxin domain BEN78_14850 IPR003018 GAF domain BEN78_14850 IPR013515 Phytochrome, central region BEN78_14850 IPR001294 Phytochrome BEN78_14850 IPR016132 Phytochrome chromophore attachment domain BEN78_14850 IPR029787 Nucleotide cyclase BEN78_14850 IPR000160 GGDEF domain BEN78_14850 IPR029016 GAF-like domain superfamily BEN78_14850 IPR035919 EAL domain superfamily BEN78_14850 IPR001633 EAL domain BEN78_14870 IPR005177 Bifunctional kinase-pyrophosphorylase BEN78_14870 IPR026530 Phosphoenolpyruvate synthase regulatory protein BEN78_14875 IPR006319 Phosphoenolpyruvate synthase BEN78_14875 IPR008279 PEP-utilising enzyme, mobile domain BEN78_14875 IPR013815 ATP-grasp fold, subdomain 1 BEN78_14875 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding BEN78_14875 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BEN78_14875 IPR018274 PEP-utilising enzyme, active site BEN78_14875 IPR036637 Phosphohistidine domain superfamily BEN78_14875 IPR023151 PEP-utilising enzyme, conserved site BEN78_14875 IPR000121 PEP-utilising enzyme, C-terminal BEN78_14875 IPR040442 Pyruvate kinase-like domain superfamily BEN78_14880 IPR013520 Exonuclease, RNase T/DNA polymerase III BEN78_14880 IPR022894 Oligoribonuclease BEN78_14880 IPR012337 Ribonuclease H-like superfamily BEN78_14880 IPR036397 Ribonuclease H superfamily BEN78_14885 IPR028883 tRNA-specific adenosine deaminase BEN78_14885 IPR016193 Cytidine deaminase-like BEN78_14885 IPR016192 APOBEC/CMP deaminase, zinc-binding BEN78_14885 IPR002125 Cytidine and deoxycytidylate deaminase domain BEN78_14895 IPR027279 D-aminopeptidase/lipoprotein domain superfamily BEN78_14895 IPR012856 D-aminopeptidase, domain B BEN78_14895 IPR012338 Beta-lactamase/transpeptidase-like BEN78_14895 IPR023645 D-aminopeptidase BEN78_14895 IPR001466 Beta-lactamase-related BEN78_14900 IPR036849 Enolase-like, C-terminal domain superfamily BEN78_14900 IPR029017 Enolase-like, N-terminal BEN78_14900 IPR029065 Enolase C-terminal domain-like BEN78_14900 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site BEN78_14900 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal BEN78_14900 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain BEN78_14900 IPR034603 Dipeptide epimerase BEN78_14905 IPR012338 Beta-lactamase/transpeptidase-like BEN78_14905 IPR001466 Beta-lactamase-related BEN78_14910 IPR000109 Proton-dependent oligopeptide transporter family BEN78_14910 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site BEN78_14910 IPR036259 MFS transporter superfamily BEN78_14910 IPR020846 Major facilitator superfamily domain BEN78_14910 IPR005279 Dipeptide/tripeptide permease BEN78_14920 IPR012910 TonB-dependent receptor, plug domain BEN78_14920 IPR039426 Vitamin B12 transporter BtuB-like BEN78_14920 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_14920 IPR010105 TonB-dependent siderophore receptor BEN78_14920 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_14930 IPR023650 Beta-lactamase, class-A active site BEN78_14930 IPR012338 Beta-lactamase/transpeptidase-like BEN78_14930 IPR000871 Beta-lactamase, class-A BEN78_14935 IPR038728 Uncharacterized membrane protein YkvI BEN78_14950 IPR036390 Winged helix DNA-binding domain superfamily BEN78_14950 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_14950 IPR000847 Transcription regulator HTH, LysR BEN78_14950 IPR005119 LysR, substrate-binding BEN78_14950 IPR037420 HTH-type transcriptional activator AmpR, PBP2 BEN78_14955 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase BEN78_14955 IPR029058 Alpha/Beta hydrolase fold BEN78_14955 IPR000073 Alpha/beta hydrolase fold-1 BEN78_14960 IPR001466 Beta-lactamase-related BEN78_14960 IPR012338 Beta-lactamase/transpeptidase-like BEN78_14960 IPR021860 Peptidase S12, Pab87-related, C-terminal BEN78_14965 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_14965 IPR010105 TonB-dependent siderophore receptor BEN78_14965 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_14965 IPR012910 TonB-dependent receptor, plug domain BEN78_14965 IPR039426 Vitamin B12 transporter BtuB-like BEN78_14970 IPR036390 Winged helix DNA-binding domain superfamily BEN78_14970 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_14970 IPR005119 LysR, substrate-binding BEN78_14970 IPR000847 Transcription regulator HTH, LysR BEN78_14975 IPR001017 Dehydrogenase, E1 component BEN78_14975 IPR029061 Thiamin diphosphate-binding fold BEN78_14975 IPR022593 2-oxoisovalerate dehydrogenase, E1 alpha subunit, N-terminal domain BEN78_14980 IPR029061 Thiamin diphosphate-binding fold BEN78_14980 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II BEN78_14980 IPR005475 Transketolase-like, pyrimidine-binding domain BEN78_14980 IPR033248 Transketolase, C-terminal domain BEN78_14985 IPR036625 E3-binding domain superfamily BEN78_14985 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily BEN78_14985 IPR000089 Biotin/lipoyl attachment BEN78_14985 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain BEN78_14985 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site BEN78_14985 IPR011053 Single hybrid motif BEN78_14985 IPR004167 Peripheral subunit-binding domain BEN78_14990 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_14990 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily BEN78_14990 IPR006258 Dihydrolipoamide dehydrogenase BEN78_14990 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BEN78_14990 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site BEN78_14990 IPR023753 FAD/NAD(P)-binding domain BEN78_14990 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I BEN78_14995 IPR005786 Branched-chain amino acid aminotransferase II BEN78_14995 IPR036038 Aminotransferase-like, PLP-dependent enzymes BEN78_14995 IPR018300 Aminotransferase, class IV, conserved site BEN78_14995 IPR001544 Aminotransferase class IV BEN78_14995 IPR033939 Branched-chain aminotransferase BEN78_15010 IPR013785 Aldolase-type TIM barrel BEN78_15010 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site BEN78_15010 IPR000891 Pyruvate carboxyltransferase BEN78_15015 IPR011761 ATP-grasp fold BEN78_15015 IPR005481 Biotin carboxylase-like, N-terminal domain BEN78_15015 IPR001882 Biotin-binding site BEN78_15015 IPR011764 Biotin carboxylation domain BEN78_15015 IPR000089 Biotin/lipoyl attachment BEN78_15015 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain BEN78_15015 IPR005482 Biotin carboxylase, C-terminal BEN78_15015 IPR011054 Rudiment single hybrid motif BEN78_15015 IPR011053 Single hybrid motif BEN78_15015 IPR016185 Pre-ATP-grasp domain superfamily BEN78_15020 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site BEN78_15020 IPR029045 ClpP/crotonase-like domain superfamily BEN78_15020 IPR001753 Enoyl-CoA hydratase/isomerase BEN78_15020 IPR014748 Enoyl-CoA hydratase, C-terminal BEN78_15025 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal BEN78_15025 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal BEN78_15025 IPR034733 Acetyl-CoA carboxylase BEN78_15025 IPR029045 ClpP/crotonase-like domain superfamily BEN78_15030 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal BEN78_15030 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily BEN78_15030 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal BEN78_15030 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal BEN78_15030 IPR006089 Acyl-CoA dehydrogenase, conserved site BEN78_15030 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily BEN78_15030 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain BEN78_15040 IPR011701 Major facilitator superfamily BEN78_15040 IPR020846 Major facilitator superfamily domain BEN78_15040 IPR036259 MFS transporter superfamily BEN78_15045 IPR036390 Winged helix DNA-binding domain superfamily BEN78_15045 IPR002577 Helix-turn-helix, HxlR type BEN78_15045 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_15045 IPR011991 ArsR-like helix-turn-helix domain BEN78_15055 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA BEN78_15055 IPR006143 RND efflux pump, membrane fusion protein BEN78_15055 IPR039562 Membrane fusion protein, biotin-lipoyl like domain BEN78_15065 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein BEN78_15070 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_15070 IPR036390 Winged helix DNA-binding domain superfamily BEN78_15070 IPR000847 Transcription regulator HTH, LysR BEN78_15070 IPR037416 Nodulation protein D, PBP2 BEN78_15070 IPR005119 LysR, substrate-binding BEN78_15075 IPR004675 Alkylhydroperoxidase AhpD core BEN78_15075 IPR029032 AhpD-like BEN78_15075 IPR003779 Carboxymuconolactone decarboxylase-like BEN78_15080 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_15080 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BEN78_15080 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BEN78_15080 IPR001085 Serine hydroxymethyltransferase BEN78_15080 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site BEN78_15080 IPR039429 Serine hydroxymethyltransferase-like domain BEN78_15090 IPR025777 GMP synthetase ATP pyrophosphatase domain BEN78_15090 IPR022955 GMP synthase BEN78_15090 IPR022310 NAD/GMP synthase BEN78_15090 IPR004739 GMP synthase, glutamine amidotransferase BEN78_15090 IPR017926 Glutamine amidotransferase BEN78_15090 IPR029062 Class I glutamine amidotransferase-like BEN78_15090 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_15090 IPR001674 GMP synthase, C-terminal BEN78_15095 IPR029066 PLP-binding barrel BEN78_15095 IPR001608 Alanine racemase, N-terminal BEN78_15095 IPR011078 Pyridoxal phosphate homeostasis protein BEN78_15100 IPR004711 Benzoate transporter BEN78_15120 IPR012893 HipA-like, C-terminal BEN78_15120 IPR017508 HipA, N-terminal subdomain 1 BEN78_15130 IPR005119 LysR, substrate-binding BEN78_15130 IPR000847 Transcription regulator HTH, LysR BEN78_15130 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_15130 IPR036390 Winged helix DNA-binding domain superfamily BEN78_15135 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN78_15135 IPR001279 Metallo-beta-lactamase BEN78_15140 IPR012338 Beta-lactamase/transpeptidase-like BEN78_15140 IPR001466 Beta-lactamase-related BEN78_15155 IPR030489 Transcription regulator Rrf2-type, conserved site BEN78_15155 IPR000944 Transcription regulator Rrf2-type BEN78_15155 IPR036390 Winged helix DNA-binding domain superfamily BEN78_15155 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_15220 IPR040766 RapA, N-terminal Tudor-like domain 2 BEN78_15220 IPR040765 RapA, N-terminal Tudor like domain 1 BEN78_15220 IPR000330 SNF2-related, N-terminal domain BEN78_15220 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN78_15220 IPR001650 Helicase, C-terminal BEN78_15220 IPR023949 RNA polymerase-associated protein RapA BEN78_15220 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_15220 IPR022737 RNA polymerase recycling, bacterial, C-terminal BEN78_15220 IPR038718 SNF2-like, N-terminal domain superfamily BEN78_15225 IPR001650 Helicase, C-terminal BEN78_15225 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN78_15225 IPR011545 DEAD/DEAH box helicase domain BEN78_15225 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_15225 IPR018973 DEAD/DEAH-box helicase, putative BEN78_15230 IPR029062 Class I glutamine amidotransferase-like BEN78_15230 IPR022310 NAD/GMP synthase BEN78_15230 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_15230 IPR017926 Glutamine amidotransferase BEN78_15230 IPR022955 GMP synthase BEN78_15230 IPR004739 GMP synthase, glutamine amidotransferase BEN78_15230 IPR001674 GMP synthase, C-terminal BEN78_15230 IPR025777 GMP synthetase ATP pyrophosphatase domain BEN78_15240 IPR013785 Aldolase-type TIM barrel BEN78_15240 IPR005990 Inosine-5'-monophosphate dehydrogenase BEN78_15240 IPR015875 IMP dehydrogenase / GMP reductase, conserved site BEN78_15240 IPR001093 IMP dehydrogenase/GMP reductase BEN78_15240 IPR000644 CBS domain BEN78_15245 IPR036291 NAD(P)-binding domain superfamily BEN78_15245 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase BEN78_15245 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BEN78_15245 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site BEN78_15245 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BEN78_15260 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase BEN78_15260 IPR036291 NAD(P)-binding domain superfamily BEN78_15260 IPR020904 Short-chain dehydrogenase/reductase, conserved site BEN78_15260 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_15265 IPR005119 LysR, substrate-binding BEN78_15265 IPR000847 Transcription regulator HTH, LysR BEN78_15265 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_15265 IPR036390 Winged helix DNA-binding domain superfamily BEN78_15270 IPR035985 Ubiquitin-activating enzyme BEN78_15270 IPR000594 THIF-type NAD/FAD binding fold BEN78_15275 IPR001453 MoaB/Mog domain BEN78_15275 IPR036425 MoaB/Mog-like domain superfamily BEN78_15275 IPR036135 MoeA, N-terminal and linker domain superfamily BEN78_15275 IPR038987 Molybdopterin biosynthesis protein MoeA-like BEN78_15275 IPR005110 MoeA, N-terminal and linker domain BEN78_15275 IPR036688 MoeA, C-terminal, domain IV superfamily BEN78_15275 IPR005111 MoeA, C-terminal, domain IV BEN78_15275 IPR008284 Molybdenum cofactor biosynthesis, conserved site BEN78_15280 IPR025877 MobA-like NTP transferase BEN78_15280 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_15280 IPR013482 Molybdenum cofactor guanylyltransferase BEN78_15285 IPR031166 EngA-type guanine nucleotide-binding (G) domain BEN78_15285 IPR005225 Small GTP-binding protein domain BEN78_15285 IPR016484 GTP-binding protein EngA BEN78_15285 IPR006073 GTP binding domain BEN78_15285 IPR032859 GTPase Der, C-terminal KH-domain-like BEN78_15285 IPR015946 K homology domain-like, alpha/beta BEN78_15285 IPR003593 AAA+ ATPase domain BEN78_15285 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_15295 IPR017687 Outer membrane protein assembly factor BamB BEN78_15295 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BEN78_15295 IPR002372 Pyrrolo-quinoline quinone repeat BEN78_15295 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily BEN78_15295 IPR015943 WD40/YVTN repeat-like-containing domain superfamily BEN78_15305 IPR001387 Cro/C1-type helix-turn-helix domain BEN78_15305 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BEN78_15305 IPR023690 Cytoskeleton protein RodZ BEN78_15305 IPR025194 Domain of unknown function DUF4115 BEN78_15315 IPR007197 Radical SAM BEN78_15315 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr BEN78_15315 IPR027492 Dual-specificity RNA methyltransferase RlmN BEN78_15315 IPR013785 Aldolase-type TIM barrel BEN78_15315 IPR040072 Methyltransferase (Class A) BEN78_15320 IPR001564 Nucleoside diphosphate kinase BEN78_15320 IPR034907 Nucleoside diphosphate kinase-like domain BEN78_15320 IPR036850 Nucleoside diphosphate kinase-like domain superfamily BEN78_15320 IPR023005 Nucleoside diphosphate kinase, active site BEN78_15330 IPR013328 6-phosphogluconate dehydrogenase, domain 2 BEN78_15330 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal BEN78_15330 IPR036291 NAD(P)-binding domain superfamily BEN78_15330 IPR001753 Enoyl-CoA hydratase/isomerase BEN78_15330 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BEN78_15330 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding BEN78_15330 IPR029045 ClpP/crotonase-like domain superfamily BEN78_15335 IPR020610 Thiolase, active site BEN78_15335 IPR020615 Thiolase, acyl-enzyme intermediate active site BEN78_15335 IPR020613 Thiolase, conserved site BEN78_15335 IPR020616 Thiolase, N-terminal BEN78_15335 IPR016039 Thiolase-like BEN78_15335 IPR002155 Thiolase BEN78_15335 IPR020617 Thiolase, C-terminal BEN78_15340 IPR006690 Outer membrane protein, OmpA-like, conserved site BEN78_15340 IPR006665 OmpA-like domain BEN78_15340 IPR036737 OmpA-like domain superfamily BEN78_15340 IPR006664 Outer membrane protein, bacterial BEN78_15340 IPR039567 Glycine zipper domain BEN78_15350 IPR023939 Cysteine desulfuration protein SufE BEN78_15350 IPR003808 Fe-S metabolism associated domain, SufE-like BEN78_15365 IPR020458 Zinc finger, DksA/TraR C4-type conserved site BEN78_15365 IPR012784 RNA polymerase-binding transcription factor DksA BEN78_15365 IPR037187 DksA, N-terminal domain superfamily BEN78_15365 IPR000962 Zinc finger, DksA/TraR C4-type BEN78_15370 IPR002696 Putative membrane protein insertion efficiency factor BEN78_15380 IPR003646 SH3-like domain, bacterial-type BEN78_15380 IPR016047 Peptidase M23 BEN78_15380 IPR011055 Duplicated hybrid motif BEN78_15390 IPR005546 Autotransporter beta-domain BEN78_15390 IPR011050 Pectin lyase fold/virulence factor BEN78_15390 IPR013425 Autotransporter-associated beta strand repeat BEN78_15390 IPR006315 Outer membrane autotransporter barrel BEN78_15390 IPR000209 Peptidase S8/S53 domain BEN78_15390 IPR036852 Peptidase S8/S53 domain superfamily BEN78_15390 IPR022398 Peptidase S8, subtilisin, His-active site BEN78_15390 IPR023828 Peptidase S8, subtilisin, Ser-active site BEN78_15390 IPR036709 Autotransporter beta-domain superfamily BEN78_15390 IPR015500 Peptidase S8, subtilisin-related BEN78_15390 IPR034061 Autotransporter serine protease peptidase domain BEN78_15395 IPR003801 GTP cyclohydrolase FolE2/MptA BEN78_15395 IPR022838 GTP cyclohydrolase FolE2 BEN78_15405 IPR037512 Phosphoglycolate phosphatase, prokaryotic BEN78_15405 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic BEN78_15405 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BEN78_15405 IPR023214 HAD superfamily BEN78_15405 IPR041492 Haloacid dehalogenase-like hydrolase BEN78_15405 IPR006439 HAD hydrolase, subfamily IA BEN78_15405 IPR036412 HAD-like superfamily BEN78_15410 IPR010233 Ubiquinone biosynthesis O-methyltransferase BEN78_15410 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_15415 IPR032466 Metal-dependent hydrolase BEN78_15415 IPR023512 Deaminase MtaD/DadD BEN78_15415 IPR011059 Metal-dependent hydrolase, composite domain superfamily BEN78_15415 IPR006680 Amidohydrolase-related BEN78_15425 IPR014722 Ribosomal protein L2, domain 2 BEN78_15425 IPR008991 Translation protein SH3-like domain superfamily BEN78_15425 IPR020599 Translation elongation factor P/YeiP BEN78_15425 IPR015365 Elongation factor P, C-terminal BEN78_15425 IPR012340 Nucleic acid-binding, OB-fold BEN78_15425 IPR013185 Translation elongation factor, KOW-like BEN78_15425 IPR001059 Translation elongation factor P/YeiP, central BEN78_15425 IPR013852 Translation elongation factor P/YeiP, conserved site BEN78_15425 IPR011768 Translation elongation factor P BEN78_15430 IPR013785 Aldolase-type TIM barrel BEN78_15430 IPR022462 Lysine-2,3-aminomutase-like BEN78_15430 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase BEN78_15430 IPR007197 Radical SAM BEN78_15435 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain BEN78_15435 IPR035919 EAL domain superfamily BEN78_15435 IPR001633 EAL domain BEN78_15440 IPR001915 Peptidase M48 BEN78_15440 IPR022919 Peptidase M48, protease HtpX, putative BEN78_15445 IPR022380 Glutamyl-Q tRNA(Asp) synthetase BEN78_15445 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_15445 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain BEN78_15445 IPR000924 Glutamyl/glutaminyl-tRNA synthetase BEN78_15450 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_15450 IPR020904 Short-chain dehydrogenase/reductase, conserved site BEN78_15450 IPR011283 Acetoacetyl-CoA reductase BEN78_15450 IPR036291 NAD(P)-binding domain superfamily BEN78_15455 IPR007897 PHB accumulation regulatory BEN78_15455 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR BEN78_15455 IPR012909 PHA accumulation regulator DNA-binding, N-terminal BEN78_15460 IPR036291 NAD(P)-binding domain superfamily BEN78_15460 IPR020904 Short-chain dehydrogenase/reductase, conserved site BEN78_15460 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_15460 IPR011283 Acetoacetyl-CoA reductase BEN78_15470 IPR042095 Sulfatase-modifying factor enzyme superfamily BEN78_15470 IPR016187 C-type lectin fold BEN78_15470 IPR005532 Sulfatase-modifying factor enzyme BEN78_15475 IPR010997 HRDC-like superfamily BEN78_15475 IPR036397 Ribonuclease H superfamily BEN78_15475 IPR002121 HRDC domain BEN78_15475 IPR006292 Ribonuclease D BEN78_15475 IPR012337 Ribonuclease H-like superfamily BEN78_15475 IPR002562 3'-5' exonuclease domain BEN78_15495 IPR006199 LexA repressor, DNA-binding domain BEN78_15495 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_15495 IPR015927 Peptidase S24/S26A/S26B/S26C BEN78_15495 IPR006197 Peptidase S24, LexA-like BEN78_15495 IPR036286 LexA/Signal peptidase-like superfamily BEN78_15495 IPR039418 LexA-like BEN78_15495 IPR006200 Transcription regulator LexA BEN78_15495 IPR036390 Winged helix DNA-binding domain superfamily BEN78_15510 IPR004805 DNA polymerase III, alpha subunit BEN78_15510 IPR003141 Polymerase/histidinol phosphatase, N-terminal BEN78_15510 IPR004013 PHP domain BEN78_15510 IPR029460 DNA polymerase, helix-hairpin-helix motif BEN78_15510 IPR023073 DNA polymerase, error-prone BEN78_15510 IPR040982 DNA polymerase III alpha subunit finger domain BEN78_15510 IPR016195 Polymerase/histidinol phosphatase-like BEN78_15510 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain BEN78_15515 IPR039425 RNA polymerase sigma-70 like BEN78_15515 IPR014284 RNA polymerase sigma-70 like domain BEN78_15515 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site BEN78_15515 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN78_15515 IPR013325 RNA polymerase sigma factor, region 2 BEN78_15515 IPR007627 RNA polymerase sigma-70 region 2 BEN78_15515 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 BEN78_15515 IPR014294 RNA polymerase sigma-W, bacillaceae BEN78_15515 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_15530 IPR016161 Aldehyde/histidinol dehydrogenase BEN78_15530 IPR016163 Aldehyde dehydrogenase, C-terminal BEN78_15530 IPR016160 Aldehyde dehydrogenase, cysteine active site BEN78_15530 IPR029510 Aldehyde dehydrogenase, glutamic acid active site BEN78_15530 IPR015590 Aldehyde dehydrogenase domain BEN78_15530 IPR016162 Aldehyde dehydrogenase, N-terminal BEN78_15540 IPR001295 Dihydroorotate dehydrogenase, conserved site BEN78_15540 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 BEN78_15540 IPR005720 Dihydroorotate dehydrogenase domain BEN78_15540 IPR013785 Aldolase-type TIM barrel BEN78_15540 IPR005719 Dihydroorotate dehydrogenase, class 2 BEN78_15545 IPR016169 FAD-binding, type PCMH, subdomain 2 BEN78_15545 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase BEN78_15545 IPR036318 FAD-binding, type PCMH-like superfamily BEN78_15545 IPR016166 FAD-binding domain, PCMH-type BEN78_15545 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal BEN78_15545 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily BEN78_15545 IPR006094 FAD linked oxidase, N-terminal BEN78_15545 IPR016167 FAD-binding, type PCMH, subdomain 1 BEN78_15555 IPR011924 Lipoprotein releasing system, ATP-binding protein BEN78_15555 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_15555 IPR015854 ABC transporter, lipoprotein release, LolD BEN78_15555 IPR003439 ABC transporter-like BEN78_15555 IPR003593 AAA+ ATPase domain BEN78_15560 IPR003838 ABC transporter permease protein domain BEN78_15560 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E BEN78_15560 IPR025857 MacB-like periplasmic core domain BEN78_15570 IPR005631 Flavinator of succinate dehydrogenase BEN78_15570 IPR036714 Flavinator of succinate dehydrogenase superfamily BEN78_15575 IPR036010 2Fe-2S ferredoxin-like superfamily BEN78_15575 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain BEN78_15575 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site BEN78_15575 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BEN78_15575 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein BEN78_15575 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BEN78_15575 IPR012675 Beta-grasp domain superfamily BEN78_15575 IPR009051 Alpha-helical ferredoxin BEN78_15575 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal BEN78_15580 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_15580 IPR011281 Succinate dehydrogenase, flavoprotein subunit BEN78_15580 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily BEN78_15580 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site BEN78_15580 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal BEN78_15580 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily BEN78_15580 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit BEN78_15580 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain BEN78_15585 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit BEN78_15585 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit BEN78_15585 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor BEN78_15590 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit BEN78_15590 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit BEN78_15590 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site BEN78_15590 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit BEN78_15595 IPR017703 YgfZ/GcvT conserved site BEN78_15595 IPR023758 tRNA-modifying protein YgfZ BEN78_15595 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal BEN78_15595 IPR006222 Aminomethyltransferase, folate-binding domain BEN78_15600 IPR006665 OmpA-like domain BEN78_15600 IPR006690 Outer membrane protein, OmpA-like, conserved site BEN78_15600 IPR000498 Outer membrane protein OmpA-like, transmembrane domain BEN78_15600 IPR002368 Outer membrane protein, OmpA BEN78_15600 IPR036737 OmpA-like domain superfamily BEN78_15600 IPR006664 Outer membrane protein, bacterial BEN78_15600 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BEN78_15605 IPR005474 Transketolase, N-terminal BEN78_15605 IPR033248 Transketolase, C-terminal domain BEN78_15605 IPR020826 Transketolase binding site BEN78_15605 IPR005475 Transketolase-like, pyrimidine-binding domain BEN78_15605 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II BEN78_15605 IPR005477 Deoxyxylulose-5-phosphate synthase BEN78_15605 IPR029061 Thiamin diphosphate-binding fold BEN78_15610 IPR034330 Glutathione S-transferases, class Zeta , C-terminal BEN78_15610 IPR010987 Glutathione S-transferase, C-terminal-like BEN78_15610 IPR036249 Thioredoxin-like superfamily BEN78_15610 IPR005955 Glutathione S-transferases, class Zeta BEN78_15610 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BEN78_15610 IPR004046 Glutathione S-transferase, C-terminal BEN78_15610 IPR034333 Glutathione S-transferases, class Zeta , N-terminal BEN78_15610 IPR040079 Glutathione Transferase family BEN78_15610 IPR004045 Glutathione S-transferase, N-terminal BEN78_15625 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal BEN78_15625 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily BEN78_15625 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal BEN78_15625 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain BEN78_15625 IPR006089 Acyl-CoA dehydrogenase, conserved site BEN78_15625 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal BEN78_15625 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily BEN78_15640 IPR015991 Uncharacterised hydrolase TatD-type BEN78_15640 IPR032466 Metal-dependent hydrolase BEN78_15640 IPR018228 Deoxyribonuclease, TatD-related, conserved site BEN78_15640 IPR001130 TatD family BEN78_15645 IPR035985 Ubiquitin-activating enzyme BEN78_15645 IPR000594 THIF-type NAD/FAD binding fold BEN78_15660 IPR002059 Cold-shock protein, DNA-binding BEN78_15660 IPR019844 Cold-shock (CSD) domain BEN78_15660 IPR012340 Nucleic acid-binding, OB-fold BEN78_15660 IPR011129 Cold shock domain BEN78_15660 IPR012156 Cold shock, CspA BEN78_15675 IPR003187 Phospholipase A1 BEN78_15675 IPR036541 Phospholipase A1 superfamily BEN78_15685 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain BEN78_15685 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain BEN78_15685 IPR020557 Fumarate lyase, conserved site BEN78_15685 IPR011167 Iron-dependent fumarate hydratase BEN78_15685 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily BEN78_15690 IPR029066 PLP-binding barrel BEN78_15690 IPR001608 Alanine racemase, N-terminal BEN78_15690 IPR011078 Pyridoxal phosphate homeostasis protein BEN78_15695 IPR004625 Pyridoxine kinase BEN78_15695 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase BEN78_15695 IPR023479 Pyridoxine/pyridoxal/pyridoxamine kinase BEN78_15695 IPR029056 Ribokinase-like BEN78_15715 IPR003439 ABC transporter-like BEN78_15715 IPR036640 ABC transporter type 1, transmembrane domain superfamily BEN78_15715 IPR011527 ABC transporter type 1, transmembrane domain BEN78_15715 IPR003593 AAA+ ATPase domain BEN78_15715 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_15715 IPR039421 Type I protein exporter BEN78_15715 IPR017871 ABC transporter, conserved site BEN78_15720 IPR004147 UbiB domain BEN78_15720 IPR011009 Protein kinase-like domain superfamily BEN78_15720 IPR010232 Probable protein kinase UbiB BEN78_15725 IPR017927 FAD-binding domain, ferredoxin reductase-type BEN78_15725 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase BEN78_15725 IPR033892 Ferredoxin--NADP reductase, bacteria BEN78_15725 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BEN78_15725 IPR001433 Oxidoreductase FAD/NAD(P)-binding BEN78_15725 IPR017938 Riboflavin synthase-like beta-barrel BEN78_15725 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain BEN78_15730 IPR036249 Thioredoxin-like superfamily BEN78_15730 IPR029760 Glutathione peroxidase conserved site BEN78_15730 IPR029759 Glutathione peroxidase active site BEN78_15730 IPR000889 Glutathione peroxidase BEN78_15735 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 BEN78_15735 IPR001567 Peptidase M3A/M3B catalytic domain BEN78_15750 IPR012156 Cold shock, CspA BEN78_15750 IPR012340 Nucleic acid-binding, OB-fold BEN78_15750 IPR019844 Cold-shock (CSD) domain BEN78_15750 IPR002059 Cold-shock protein, DNA-binding BEN78_15750 IPR011129 Cold shock domain BEN78_15765 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site BEN78_15765 IPR036259 MFS transporter superfamily BEN78_15765 IPR000109 Proton-dependent oligopeptide transporter family BEN78_15765 IPR020846 Major facilitator superfamily domain BEN78_15765 IPR005279 Dipeptide/tripeptide permease BEN78_15785 IPR007693 DNA helicase, DnaB-like, N-terminal BEN78_15785 IPR007692 DNA helicase, DnaB type BEN78_15785 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily BEN78_15785 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal BEN78_15785 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_15785 IPR003593 AAA+ ATPase domain BEN78_15785 IPR007694 DNA helicase, DnaB-like, C-terminal BEN78_15790 IPR020070 Ribosomal protein L9, N-terminal BEN78_15790 IPR036935 Ribosomal protein L9, N-terminal domain superfamily BEN78_15790 IPR036791 Ribosomal protein L9, C-terminal domain superfamily BEN78_15790 IPR020594 Ribosomal protein L9, bacteria/chloroplast BEN78_15790 IPR009027 Ribosomal protein L9/RNase H1, N-terminal BEN78_15790 IPR000244 Ribosomal protein L9 BEN78_15790 IPR020069 Ribosomal protein L9, C-terminal BEN78_15795 IPR001648 Ribosomal protein S18 BEN78_15795 IPR018275 Ribosomal protein S18, conserved site BEN78_15795 IPR036870 Ribosomal protein S18 superfamily BEN78_15800 IPR000529 Ribosomal protein S6 BEN78_15800 IPR020814 Ribosomal protein S6, plastid/chloroplast BEN78_15800 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 BEN78_15800 IPR035980 Ribosomal protein S6 superfamily BEN78_15805 IPR020846 Major facilitator superfamily domain BEN78_15805 IPR011701 Major facilitator superfamily BEN78_15805 IPR005828 Major facilitator, sugar transporter-like BEN78_15805 IPR004736 MFS transporter, metabolite:H symporter BEN78_15805 IPR005829 Sugar transporter, conserved site BEN78_15805 IPR036259 MFS transporter superfamily BEN78_15815 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site BEN78_15815 IPR014207 Cytochrome o ubiquinol oxidase, subunit I BEN78_15815 IPR036927 Cytochrome c oxidase-like, subunit I superfamily BEN78_15815 IPR000883 Cytochrome c oxidase subunit I BEN78_15815 IPR023616 Cytochrome c oxidase-like, subunit I domain BEN78_15820 IPR033946 Ubiquinol oxidase subunit III domain BEN78_15820 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle BEN78_15820 IPR000298 Cytochrome c oxidase subunit III-like BEN78_15820 IPR035973 Cytochrome c oxidase subunit III-like superfamily BEN78_15820 IPR014206 Cytochrome o ubiquinol oxidase, subunit III BEN78_15820 IPR024791 Cytochrome c oxidase subunit III BEN78_15825 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes BEN78_15825 IPR014210 Cytochrome o ubiquinol oxidase subunit IV BEN78_15830 IPR002994 Surfeit locus 1/Shy1 BEN78_15840 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) BEN78_15840 IPR006195 Aminoacyl-tRNA synthetase, class II BEN78_15840 IPR004522 Asparagine-tRNA ligase BEN78_15840 IPR012340 Nucleic acid-binding, OB-fold BEN78_15840 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb BEN78_15840 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type BEN78_15855 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase BEN78_15855 IPR036291 NAD(P)-binding domain superfamily BEN78_15855 IPR020904 Short-chain dehydrogenase/reductase, conserved site BEN78_15855 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_15860 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site BEN78_15860 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding BEN78_15860 IPR010663 Zinc finger, FPG/IleRS-type BEN78_15860 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type BEN78_15860 IPR010979 Ribosomal protein S13-like, H2TH BEN78_15860 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain BEN78_15860 IPR035937 MutM-like, N-terminal BEN78_15860 IPR023713 Endonuclease VIII BEN78_15865 IPR017628 2-hydroxymuconic semialdehyde dehydrogenase BEN78_15865 IPR016162 Aldehyde dehydrogenase, N-terminal BEN78_15865 IPR016161 Aldehyde/histidinol dehydrogenase BEN78_15865 IPR016163 Aldehyde dehydrogenase, C-terminal BEN78_15865 IPR016160 Aldehyde dehydrogenase, cysteine active site BEN78_15865 IPR029510 Aldehyde dehydrogenase, glutamic acid active site BEN78_15865 IPR015590 Aldehyde dehydrogenase domain BEN78_15870 IPR036874 Carbonic anhydrase superfamily BEN78_15870 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site BEN78_15870 IPR001765 Carbonic anhydrase BEN78_15875 IPR019897 RidA, conserved site BEN78_15875 IPR006056 RidA family BEN78_15875 IPR006175 YjgF/YER057c/UK114 family BEN78_15875 IPR035959 RutC-like superfamily BEN78_15880 IPR011051 RmlC-like cupin domain superfamily BEN78_15880 IPR010329 3-hydroxyanthranilic acid dioxygenase BEN78_15880 IPR014710 RmlC-like jelly roll fold BEN78_15890 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BEN78_15890 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BEN78_15890 IPR000192 Aminotransferase class V domain BEN78_15890 IPR010111 Kynureninase BEN78_15890 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_15900 IPR002938 FAD-binding domain BEN78_15900 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_15900 IPR027545 Kynurenine 3-monooxygenase BEN78_15905 IPR038649 Exonuclease I, SH3-like domain superfamily BEN78_15905 IPR023607 Exodeoxyribonuclease I BEN78_15905 IPR034748 Exonuclease I, C-terminal alpha-helical domain BEN78_15905 IPR013520 Exonuclease, RNase T/DNA polymerase III BEN78_15905 IPR013620 Exodeoxyribonuclease I, C-terminal BEN78_15905 IPR034747 Exonuclease I, SH3-like domain BEN78_15905 IPR036397 Ribonuclease H superfamily BEN78_15905 IPR012337 Ribonuclease H-like superfamily BEN78_15920 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BEN78_15920 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily BEN78_15925 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type BEN78_15925 IPR011005 Dihydropteroate synthase-like BEN78_15925 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial BEN78_15935 IPR001789 Signal transduction response regulator, receiver domain BEN78_15935 IPR011006 CheY-like superfamily BEN78_15935 IPR002197 DNA binding HTH domain, Fis-type BEN78_15945 IPR020103 Pseudouridine synthase, catalytic domain superfamily BEN78_15945 IPR006225 Pseudouridine synthase, RluC/RluD BEN78_15945 IPR006145 Pseudouridine synthase, RsuA/RluA BEN78_15945 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site BEN78_15945 IPR002942 RNA-binding S4 domain BEN78_15950 IPR019500 Peptidase S46 BEN78_15950 IPR009003 Peptidase S1, PA clan BEN78_15965 IPR004218 Prokaryotic glutathione synthetase, ATP-binding BEN78_15965 IPR006284 Glutathione synthetase, prokaryotic BEN78_15965 IPR013815 ATP-grasp fold, subdomain 1 BEN78_15965 IPR011761 ATP-grasp fold BEN78_15965 IPR004215 Prokaryotic glutathione synthetase, N-terminal BEN78_15965 IPR016185 Pre-ATP-grasp domain superfamily BEN78_15970 IPR010046 Oxidoreductase alpha (molybdopterin) subunit BEN78_15970 IPR006656 Molybdopterin oxidoreductase BEN78_15970 IPR037951 YdeP-like, MopB domain BEN78_15970 IPR009010 Aspartate decarboxylase-like domain superfamily BEN78_15970 IPR041953 YdeP, molybdopterin-binding oxidoreductase-like domain BEN78_16000 IPR006680 Amidohydrolase-related BEN78_16000 IPR011059 Metal-dependent hydrolase, composite domain superfamily BEN78_16000 IPR032466 Metal-dependent hydrolase BEN78_16010 IPR009760 Protein of unknown function DUF1328 BEN78_16030 IPR020904 Short-chain dehydrogenase/reductase, conserved site BEN78_16030 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_16030 IPR036291 NAD(P)-binding domain superfamily BEN78_16045 IPR006160 Short chain fatty acid transporter AtoE BEN78_16045 IPR006161 Conserved hypothetical protein CHP00336 BEN78_16050 IPR024079 Metallopeptidase, catalytic domain superfamily BEN78_16050 IPR008753 Peptidase M13, N-terminal domain BEN78_16050 IPR000718 Peptidase M13 BEN78_16050 IPR018497 Peptidase M13, C-terminal domain BEN78_16050 IPR042089 Peptidase M13, domain 2 BEN78_16055 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase BEN78_16055 IPR025532 Glucose-6-phosphate 1-epimerase BEN78_16055 IPR011013 Galactose mutarotase-like domain superfamily BEN78_16055 IPR014718 Glycoside hydrolase-type carbohydrate-binding BEN78_16060 IPR008263 Glycoside hydrolase, family 16, active site BEN78_16060 IPR000757 Glycoside hydrolase family 16 BEN78_16060 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily BEN78_16065 IPR015868 Glutaminase BEN78_16065 IPR012338 Beta-lactamase/transpeptidase-like BEN78_16070 IPR004045 Glutathione S-transferase, N-terminal BEN78_16070 IPR016639 Glutathione S-transferase Omega/GSH BEN78_16070 IPR010987 Glutathione S-transferase, C-terminal-like BEN78_16070 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BEN78_16070 IPR036249 Thioredoxin-like superfamily BEN78_16080 IPR004714 Cytochrome oxidase maturation protein cbb3-type BEN78_16085 IPR023214 HAD superfamily BEN78_16085 IPR036412 HAD-like superfamily BEN78_16085 IPR008250 P-type ATPase, A domain superfamily BEN78_16085 IPR023298 P-type ATPase, transmembrane domain superfamily BEN78_16085 IPR006121 Heavy metal-associated domain, HMA BEN78_16085 IPR023299 P-type ATPase, cytoplasmic domain N BEN78_16085 IPR018303 P-type ATPase, phosphorylation site BEN78_16085 IPR001757 P-type ATPase BEN78_16085 IPR027256 P-type ATPase, subfamily IB BEN78_16085 IPR017969 Heavy-metal-associated, conserved site BEN78_16085 IPR036163 Heavy metal-associated domain superfamily BEN78_16095 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BEN78_16095 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG BEN78_16095 IPR013783 Immunoglobulin-like fold BEN78_16095 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BEN78_16095 IPR032879 FixG, C-terminal immunoglobulin-like domain BEN78_16105 IPR004678 Cytochrome c oxidase cbb3-type, subunit III BEN78_16105 IPR009056 Cytochrome c-like domain BEN78_16105 IPR036909 Cytochrome c-like domain superfamily BEN78_16105 IPR008168 Cytochrome c, class IC BEN78_16105 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal BEN78_16105 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily BEN78_16115 IPR023616 Cytochrome c oxidase-like, subunit I domain BEN78_16115 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site BEN78_16115 IPR000883 Cytochrome c oxidase subunit I BEN78_16115 IPR004677 Cytochrome c oxidase cbb3-type, subunit I BEN78_16115 IPR036927 Cytochrome c oxidase-like, subunit I superfamily BEN78_16120 IPR003791 Protein of unknown function UPF0178 BEN78_16125 IPR023210 NADP-dependent oxidoreductase domain BEN78_16125 IPR036812 NADP-dependent oxidoreductase domain superfamily BEN78_16175 IPR001347 Sugar isomerase (SIS) BEN78_16175 IPR035464 AgaS, SIS domain BEN78_16175 IPR035466 GlmS/AgaS, SIS domain 1 BEN78_16175 IPR014180 Sugar isomerase, AgaS BEN78_16180 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ-like BEN78_16180 IPR023435 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit KbaZ BEN78_16180 IPR013785 Aldolase-type TIM barrel BEN78_16190 IPR000111 Glycoside hydrolase family 27/36, conserved site BEN78_16190 IPR013780 Glycosyl hydrolase, all-beta BEN78_16190 IPR002252 Glycoside hydrolase family 36 BEN78_16190 IPR017853 Glycoside hydrolase superfamily BEN78_16190 IPR013785 Aldolase-type TIM barrel BEN78_16190 IPR038417 Alpha-galactosidase, N-terminal domain superfamily BEN78_16190 IPR031705 Glycosyl hydrolase family 36, C-terminal BEN78_16190 IPR031704 Glycosyl hydrolase family 36, N-terminal BEN78_16200 IPR018356 Transcription regulator, HTH DeoR-type, conserved site BEN78_16200 IPR037171 NagB/RpiA transferase-like BEN78_16200 IPR036390 Winged helix DNA-binding domain superfamily BEN78_16200 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_16200 IPR001034 DeoR-type HTH domain BEN78_16200 IPR014036 DeoR C-terminal sensor domain BEN78_16205 IPR003507 Peptidase family S66 BEN78_16205 IPR040921 LD-carboxypeptidase, C-terminal BEN78_16205 IPR040449 LD-carboxypeptidase, N-terminal BEN78_16205 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal BEN78_16205 IPR029062 Class I glutamine amidotransferase-like BEN78_16205 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily BEN78_16235 IPR001316 Peptidase S1A, streptogrisin BEN78_16235 IPR004236 Peptidase S1A, alpha-lytic prodomain BEN78_16235 IPR037295 Alpha-lytic protease prodomain BEN78_16235 IPR001254 Serine proteases, trypsin domain BEN78_16235 IPR009003 Peptidase S1, PA clan BEN78_16235 IPR035070 Streptogrisin prodomain BEN78_16235 IPR033116 Serine proteases, trypsin family, serine active site BEN78_16250 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_16250 IPR016909 Ribosomal RNA large subunit methyltransferase F BEN78_16250 IPR010286 METTL16/RlmF family BEN78_16290 IPR040198 Fido domain-containing protein BEN78_16290 IPR025758 Fic/DOC N-terminal BEN78_16290 IPR003812 Fido domain BEN78_16290 IPR036597 Fido-like domain superfamily BEN78_16290 IPR026287 Protein adenylyltransferase SoFic-like BEN78_16295 IPR002711 HNH endonuclease BEN78_16295 IPR003615 HNH nuclease BEN78_16325 IPR031807 HicB-like antitoxin of toxin-antitoxin system BEN78_16325 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BEN78_16325 IPR035069 TTHA1013/TTHA0281-like BEN78_16340 IPR036291 NAD(P)-binding domain superfamily BEN78_16340 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_16340 IPR020904 Short-chain dehydrogenase/reductase, conserved site BEN78_16340 IPR011283 Acetoacetyl-CoA reductase BEN78_16350 IPR036390 Winged helix DNA-binding domain superfamily BEN78_16350 IPR000485 AsnC-type HTH domain BEN78_16350 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_16350 IPR011991 ArsR-like helix-turn-helix domain BEN78_16350 IPR019885 Transcription regulator HTH, AsnC-type, conserved site BEN78_16350 IPR011008 Dimeric alpha-beta barrel BEN78_16350 IPR019888 Transcription regulator AsnC-type BEN78_16350 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BEN78_16355 IPR023080 D-amino acid dehydrogenase DadA BEN78_16355 IPR006076 FAD dependent oxidoreductase BEN78_16355 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_16360 IPR029066 PLP-binding barrel BEN78_16360 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site BEN78_16360 IPR001608 Alanine racemase, N-terminal BEN78_16360 IPR000821 Alanine racemase BEN78_16360 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal BEN78_16360 IPR011079 Alanine racemase, C-terminal BEN78_16365 IPR010118 Para-aminobenzoate synthase/anthranilate synthase, component I BEN78_16365 IPR015890 Chorismate-utilising enzyme, C-terminal BEN78_16365 IPR006805 Anthranilate synthase component I, N-terminal BEN78_16365 IPR019999 Anthranilate synthase component I-like BEN78_16365 IPR005801 ADC synthase BEN78_16385 IPR003846 Protein adenylyltransferase SelO BEN78_16395 IPR011545 DEAD/DEAH box helicase domain BEN78_16395 IPR028618 ATP-dependent RNA helicase DeaD BEN78_16395 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN78_16395 IPR001650 Helicase, C-terminal BEN78_16395 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily BEN78_16395 IPR034415 CsdA, RNA recognition motif BEN78_16395 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_16395 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BEN78_16395 IPR014014 RNA helicase, DEAD-box type, Q motif BEN78_16395 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain BEN78_16400 IPR022310 NAD/GMP synthase BEN78_16400 IPR029062 Class I glutamine amidotransferase-like BEN78_16400 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_16400 IPR017926 Glutamine amidotransferase BEN78_16400 IPR001674 GMP synthase, C-terminal BEN78_16400 IPR004739 GMP synthase, glutamine amidotransferase BEN78_16400 IPR022955 GMP synthase BEN78_16400 IPR025777 GMP synthetase ATP pyrophosphatase domain BEN78_16415 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal BEN78_16415 IPR023042 Peptidase M17, leucine aminopeptidase BEN78_16415 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal BEN78_16415 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B BEN78_16440 IPR011701 Major facilitator superfamily BEN78_16440 IPR020846 Major facilitator superfamily domain BEN78_16440 IPR005828 Major facilitator, sugar transporter-like BEN78_16440 IPR036259 MFS transporter superfamily BEN78_16440 IPR004736 MFS transporter, metabolite:H symporter BEN78_16440 IPR005829 Sugar transporter, conserved site BEN78_16445 IPR010105 TonB-dependent siderophore receptor BEN78_16445 IPR010917 TonB-dependent receptor, conserved site BEN78_16445 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_16445 IPR012910 TonB-dependent receptor, plug domain BEN78_16445 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_16445 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_16445 IPR039423 TonB-dependent receptor-like BEN78_16450 IPR023187 Transcriptional regulator MarR-type, conserved site BEN78_16450 IPR000835 MarR-type HTH domain BEN78_16450 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_16450 IPR036390 Winged helix DNA-binding domain superfamily BEN78_16465 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BEN78_16465 IPR001647 DNA-binding HTH domain, TetR-type BEN78_16465 IPR009057 Homeobox-like domain superfamily BEN78_16485 IPR029058 Alpha/Beta hydrolase fold BEN78_16485 IPR011659 WD40-like Beta Propeller BEN78_16485 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain BEN78_16485 IPR011042 Six-bladed beta-propeller, TolB-like BEN78_16495 IPR001045 Spermidine/spermine synthases BEN78_16495 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_16495 IPR037163 Spermidine synthase, tetramerisation domain superfamily BEN78_16495 IPR030374 Polyamine biosynthesis domain BEN78_16495 IPR035246 Spermidine synthase, tetramerisation domain BEN78_16495 IPR030373 Polyamine biosynthesis domain, conserved site BEN78_16520 IPR013783 Immunoglobulin-like fold BEN78_16520 IPR017853 Glycoside hydrolase superfamily BEN78_16520 IPR001579 Glycoside hydrolase, chitinase active site BEN78_16520 IPR001223 Glycoside hydrolase family 18, catalytic domain BEN78_16520 IPR029070 Chitinase insertion domain superfamily BEN78_16520 IPR011583 Chitinase II BEN78_16520 IPR018366 Carbohydrate-binding type-2, conserved site BEN78_16520 IPR012291 CBM2, carbohydrate-binding domain superfamily BEN78_16520 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily BEN78_16520 IPR001919 Carbohydrate-binding type-2 domain BEN78_16520 IPR036116 Fibronectin type III superfamily BEN78_16520 IPR003961 Fibronectin type III BEN78_16525 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily BEN78_16525 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal BEN78_16525 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal BEN78_16525 IPR002504 NAD kinase BEN78_16530 IPR007780 NAD-glutamate dehydrogenase, bacteria BEN78_16530 IPR028971 NAD-glutamate dehydrogenase BEN78_16530 IPR036291 NAD(P)-binding domain superfamily BEN78_16535 IPR006089 Acyl-CoA dehydrogenase, conserved site BEN78_16535 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain BEN78_16535 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal BEN78_16535 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal BEN78_16535 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal BEN78_16535 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily BEN78_16535 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily BEN78_16540 IPR004758 Amino acid transporter BEN78_16540 IPR002293 Amino acid/polyamine transporter I BEN78_16545 IPR002293 Amino acid/polyamine transporter I BEN78_16555 IPR017714 Methylthioribulose-1-phosphate dehydratase BEN78_16555 IPR036409 Class II aldolase/adducin N-terminal domain superfamily BEN78_16555 IPR001303 Class II aldolase/adducin N-terminal BEN78_16560 IPR004313 Acireductone dioxygenase ARD family BEN78_16560 IPR023956 Acireductone dioxygenase ARD, bacteria BEN78_16560 IPR014710 RmlC-like jelly roll fold BEN78_16560 IPR011051 RmlC-like cupin domain superfamily BEN78_16565 IPR006439 HAD hydrolase, subfamily IA BEN78_16565 IPR023214 HAD superfamily BEN78_16565 IPR023943 Enolase-phosphatase E1 BEN78_16565 IPR036412 HAD-like superfamily BEN78_16575 IPR020579 Exonuclease VII, large subunit, C-terminal BEN78_16575 IPR003753 Exonuclease VII, large subunit BEN78_16575 IPR025824 OB-fold nucleic acid binding domain BEN78_16580 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding BEN78_16580 IPR000399 TPP-binding enzyme, conserved site BEN78_16580 IPR039368 Acetolactate synthase large subunit, TPP binding domain BEN78_16580 IPR029035 DHS-like NAD/FAD-binding domain superfamily BEN78_16580 IPR029061 Thiamin diphosphate-binding fold BEN78_16580 IPR012000 Thiamine pyrophosphate enzyme, central domain BEN78_16580 IPR012846 Acetolactate synthase, large subunit, biosynthetic BEN78_16580 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain BEN78_16585 IPR016163 Aldehyde dehydrogenase, C-terminal BEN78_16585 IPR029510 Aldehyde dehydrogenase, glutamic acid active site BEN78_16585 IPR016162 Aldehyde dehydrogenase, N-terminal BEN78_16585 IPR016161 Aldehyde/histidinol dehydrogenase BEN78_16585 IPR015590 Aldehyde dehydrogenase domain BEN78_16590 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily BEN78_16590 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain BEN78_16590 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like BEN78_16590 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase BEN78_16590 IPR023019 Histidine biosynthesis bifunctional protein HisIE BEN78_16595 IPR013785 Aldolase-type TIM barrel BEN78_16595 IPR006062 Histidine biosynthesis BEN78_16595 IPR004651 Histidine biosynthesis, HisF BEN78_16595 IPR011060 Ribulose-phosphate binding barrel BEN78_16600 IPR011060 Ribulose-phosphate binding barrel BEN78_16600 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA BEN78_16600 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase BEN78_16600 IPR013785 Aldolase-type TIM barrel BEN78_16600 IPR006062 Histidine biosynthesis BEN78_16605 IPR017926 Glutamine amidotransferase BEN78_16605 IPR010139 Imidazole glycerol phosphate synthase, subunit H BEN78_16605 IPR029062 Class I glutamine amidotransferase-like BEN78_16610 IPR006543 Histidinol-phosphate phosphatase BEN78_16610 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily BEN78_16610 IPR000807 Imidazoleglycerol-phosphate dehydratase BEN78_16610 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site BEN78_16610 IPR013954 Polynucleotide kinase 3 phosphatase BEN78_16610 IPR020568 Ribosomal protein S5 domain 2-type fold BEN78_16610 IPR005954 Histidinol-phosphatase BEN78_16610 IPR020566 Histidine biosynthesis bifunctional protein HisB BEN78_16610 IPR023214 HAD superfamily BEN78_16610 IPR036412 HAD-like superfamily BEN78_16610 IPR006549 HAD-superfamily hydrolase,subfamily IIIA BEN78_16615 IPR004839 Aminotransferase, class I/classII BEN78_16615 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_16615 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BEN78_16615 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BEN78_16615 IPR005861 Histidinol-phosphate aminotransferase family BEN78_16620 IPR001692 Histidinol dehydrogenase, conserved site BEN78_16620 IPR022695 Histidinol dehydrogenase, monofunctional BEN78_16620 IPR012131 Histidinol dehydrogenase BEN78_16620 IPR016161 Aldehyde/histidinol dehydrogenase BEN78_16625 IPR013820 ATP phosphoribosyltransferase, catalytic domain BEN78_16625 IPR018198 ATP phosphoribosyltransferase, conserved site BEN78_16625 IPR001348 ATP phosphoribosyltransferase HisG BEN78_16625 IPR020621 ATP phosphoribosyltransferase HisG, long form BEN78_16625 IPR013115 Histidine biosynthesis HisG, C-terminal BEN78_16625 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BEN78_16645 IPR001106 Aromatic amino acid lyase BEN78_16645 IPR024083 Fumarase/histidase, N-terminal BEN78_16645 IPR005921 Histidine ammonia-lyase BEN78_16645 IPR008948 L-Aspartase-like BEN78_16645 IPR022313 Phenylalanine/histidine ammonia-lyases, active site BEN78_16655 IPR036621 Anticodon-binding domain superfamily BEN78_16655 IPR033656 Histidyl-anticodon-binding BEN78_16655 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit BEN78_16655 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain BEN78_16655 IPR015807 Histidine-tRNA ligase BEN78_16655 IPR004154 Anticodon-binding BEN78_16655 IPR006195 Aminoacyl-tRNA synthetase, class II BEN78_16665 IPR036640 ABC transporter type 1, transmembrane domain superfamily BEN78_16665 IPR011527 ABC transporter type 1, transmembrane domain BEN78_16665 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_16665 IPR003593 AAA+ ATPase domain BEN78_16665 IPR003439 ABC transporter-like BEN78_16665 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD BEN78_16665 IPR017871 ABC transporter, conserved site BEN78_16665 IPR039421 Type I protein exporter BEN78_16685 IPR000873 AMP-dependent synthetase/ligase BEN78_16685 IPR020845 AMP-binding, conserved site BEN78_16685 IPR025110 AMP-binding enzyme, C-terminal domain BEN78_16690 IPR016161 Aldehyde/histidinol dehydrogenase BEN78_16690 IPR016162 Aldehyde dehydrogenase, N-terminal BEN78_16690 IPR015590 Aldehyde dehydrogenase domain BEN78_16690 IPR012134 Glutamate-5-semialdehyde dehydrogenase BEN78_16690 IPR000965 GPR domain BEN78_16690 IPR016163 Aldehyde dehydrogenase, C-terminal BEN78_16690 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site BEN78_16705 IPR015947 PUA-like superfamily BEN78_16705 IPR002478 PUA domain BEN78_16705 IPR019797 Glutamate 5-kinase, conserved site BEN78_16705 IPR036393 Acetylglutamate kinase-like superfamily BEN78_16705 IPR001048 Aspartate/glutamate/uridylate kinase BEN78_16705 IPR041739 Glutamate-5-kinase domain BEN78_16705 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase BEN78_16705 IPR011529 Glutamate 5-kinase BEN78_16705 IPR001057 Glutamate/acetylglutamate kinase BEN78_16705 IPR036974 PUA domain superfamily BEN78_16715 IPR008948 L-Aspartase-like BEN78_16715 IPR024083 Fumarase/histidase, N-terminal BEN78_16715 IPR009049 Argininosuccinate lyase BEN78_16715 IPR022761 Fumarate lyase, N-terminal BEN78_16715 IPR020557 Fumarate lyase, conserved site BEN78_16715 IPR000362 Fumarate lyase family BEN78_16720 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site BEN78_16720 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 BEN78_16720 IPR036291 NAD(P)-binding domain superfamily BEN78_16720 IPR000534 Semialdehyde dehydrogenase, NAD-binding BEN78_16725 IPR016181 Acyl-CoA N-acyltransferase BEN78_16725 IPR001048 Aspartate/glutamate/uridylate kinase BEN78_16725 IPR011242 Acetylglutamate kinase ArgB, GNAT domain-containing BEN78_16725 IPR004662 Acetylglutamate kinase family BEN78_16725 IPR036393 Acetylglutamate kinase-like superfamily BEN78_16725 IPR041734 N-Acetyl-L-glutamate kinase, fungal-type BEN78_16725 IPR006855 Vertebrate-like NAGS Gcn5-related N-acetyltransferase (GNAT) domain BEN78_16730 IPR002933 Peptidase M20 BEN78_16730 IPR036264 Bacterial exopeptidase dimerisation domain BEN78_16730 IPR011650 Peptidase M20, dimerisation domain BEN78_16730 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase BEN78_16735 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_16735 IPR023434 Argininosuccinate synthase, type 1 subfamily BEN78_16735 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body BEN78_16735 IPR018223 Argininosuccinate synthase, conserved site BEN78_16735 IPR001518 Argininosuccinate synthase BEN78_16740 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding BEN78_16740 IPR006130 Aspartate/ornithine carbamoyltransferase BEN78_16740 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily BEN78_16740 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain BEN78_16750 IPR032678 tRNA synthetases class I, catalytic domain BEN78_16750 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase BEN78_16750 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_16750 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR BEN78_16750 IPR015803 Cysteine-tRNA ligase BEN78_16750 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding BEN78_16755 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 BEN78_16755 IPR016039 Thiolase-like BEN78_16755 IPR000794 Beta-ketoacyl synthase BEN78_16755 IPR014030 Beta-ketoacyl synthase, N-terminal BEN78_16755 IPR018201 Beta-ketoacyl synthase, active site BEN78_16755 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BEN78_16755 IPR014031 Beta-ketoacyl synthase, C-terminal BEN78_16760 IPR036736 ACP-like superfamily BEN78_16760 IPR009081 Phosphopantetheine binding ACP domain BEN78_16760 IPR006162 Phosphopantetheine attachment site BEN78_16760 IPR003231 Acyl carrier protein (ACP) BEN78_16765 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase BEN78_16765 IPR036291 NAD(P)-binding domain superfamily BEN78_16765 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_16765 IPR020904 Short-chain dehydrogenase/reductase, conserved site BEN78_16770 IPR001227 Acyl transferase domain superfamily BEN78_16770 IPR014043 Acyl transferase BEN78_16770 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BEN78_16770 IPR024925 Malonyl CoA-acyl carrier protein transacylase BEN78_16770 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type BEN78_16770 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding BEN78_16780 IPR016039 Thiolase-like BEN78_16780 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 BEN78_16780 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BEN78_16780 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal BEN78_16785 IPR002677 Ribosomal protein L32p BEN78_16785 IPR011332 Zinc-binding ribosomal protein BEN78_16790 IPR003772 Large ribosomal RNA subunit accumulation protein YceD BEN78_16790 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria BEN78_16795 IPR029001 Inosine triphosphate pyrophosphatase-like BEN78_16795 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein BEN78_16825 IPR041552 UvrA DNA-binding domain BEN78_16825 IPR017871 ABC transporter, conserved site BEN78_16825 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_16830 IPR005804 Fatty acid desaturase domain BEN78_16835 IPR036010 2Fe-2S ferredoxin-like superfamily BEN78_16835 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain BEN78_16835 IPR012675 Beta-grasp domain superfamily BEN78_16835 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain BEN78_16835 IPR017938 Riboflavin synthase-like beta-barrel BEN78_16835 IPR001433 Oxidoreductase FAD/NAD(P)-binding BEN78_16835 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BEN78_16835 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase BEN78_16835 IPR017927 FAD-binding domain, ferredoxin reductase-type BEN78_16840 IPR009057 Homeobox-like domain superfamily BEN78_16840 IPR001647 DNA-binding HTH domain, TetR-type BEN78_16840 IPR023764 Transcriptional repressor HTH, FabR BEN78_16850 IPR012675 Beta-grasp domain superfamily BEN78_16850 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site BEN78_16850 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain BEN78_16850 IPR036010 2Fe-2S ferredoxin-like superfamily BEN78_16850 IPR036884 [2Fe-2S]-binding domain superfamily BEN78_16850 IPR002888 [2Fe-2S]-binding BEN78_16850 IPR006311 Twin-arginine translocation pathway, signal sequence BEN78_16860 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily BEN78_16860 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding BEN78_16860 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily BEN78_16860 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead