locus-tag class description BEN78_00020 PF00440 Bacterial regulatory proteins, tetR family BEN78_00030 PF01799 [2Fe-2S] binding domain BEN78_00030 PF00111 2Fe-2S iron-sulfur cluster binding domain BEN78_00035 PF03450 CO dehydrogenase flavoprotein C-terminal domain BEN78_00035 PF00941 FAD binding domain in molybdopterin dehydrogenase BEN78_00040 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BEN78_00040 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BEN78_00050 PF01226 Formate/nitrite transporter BEN78_00055 PF00144 Beta-lactamase BEN78_00060 PF03466 LysR substrate binding domain BEN78_00060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN78_00065 PF02525 Flavodoxin-like fold BEN78_00130 PF00990 Diguanylate cyclase, GGDEF domain BEN78_00130 PF08448 PAS fold BEN78_00135 PF03466 LysR substrate binding domain BEN78_00135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN78_00145 PF13784 Fic/DOC family N-terminal BEN78_00145 PF02661 Fic/DOC family BEN78_00150 PF07152 YaeQ protein BEN78_00160 PF00171 Aldehyde dehydrogenase family BEN78_00170 PF01256 Carbohydrate kinase BEN78_00175 PF00300 Histidine phosphatase superfamily (branch 1) BEN78_00175 PF13456 Reverse transcriptase-like BEN78_00185 PF01042 Endoribonuclease L-PSP BEN78_00190 PF07995 Glucose / Sorbosone dehydrogenase BEN78_00200 PF00563 EAL domain BEN78_00200 PF08495 FIST N domain BEN78_00200 PF10442 FIST C domain BEN78_00200 PF00990 Diguanylate cyclase, GGDEF domain BEN78_00205 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BEN78_00205 PF00326 Prolyl oligopeptidase family BEN78_00210 PF07715 TonB-dependent Receptor Plug Domain BEN78_00210 PF00593 TonB dependent receptor BEN78_00215 PF07715 TonB-dependent Receptor Plug Domain BEN78_00215 PF00593 TonB dependent receptor BEN78_00235 PF00709 Adenylosuccinate synthetase BEN78_00245 PF01145 SPFH domain / Band 7 family BEN78_00250 PF12221 Bacterial membrane protein N terminal BEN78_00250 PF01145 SPFH domain / Band 7 family BEN78_00255 PF01926 50S ribosome-binding GTPase BEN78_00255 PF13167 GTP-binding GTPase N-terminal BEN78_00255 PF16360 GTP-binding GTPase Middle Region BEN78_00260 PF17209 Hfq protein BEN78_00270 PF13520 Amino acid permease BEN78_00275 PF00809 Pterin binding enzyme BEN78_00285 PF01728 FtsJ-like methyltransferase BEN78_00290 PF01985 CRS1 / YhbY (CRM) domain BEN78_00295 PF04430 Protein of unknown function (DUF498/DUF598) BEN78_00300 PF01551 Peptidase family M23 BEN78_00300 PF01476 LysM domain BEN78_00305 PF09335 SNARE associated Golgi protein BEN78_00315 PF01975 Survival protein SurE BEN78_00325 PF05362 Lon protease (S16) C-terminal proteolytic domain BEN78_00325 PF02190 ATP-dependent protease La (LON) substrate-binding domain BEN78_00325 PF00004 ATPase family associated with various cellular activities (AAA) BEN78_00330 PF07724 AAA domain (Cdc48 subfamily) BEN78_00330 PF10431 C-terminal, D2-small domain, of ClpB protein BEN78_00330 PF06689 ClpX C4-type zinc finger BEN78_00335 PF00574 Clp protease BEN78_00340 PF05698 Bacterial trigger factor protein (TF) C-terminus BEN78_00340 PF05697 Bacterial trigger factor protein (TF) BEN78_00360 PF00857 Isochorismatase family BEN78_00370 PF05974 Domain of unknown function (DUF892) BEN78_00390 PF00180 Isocitrate/isopropylmalate dehydrogenase BEN78_00400 PF00462 Glutaredoxin BEN78_00405 PF13181 Tetratricopeptide repeat BEN78_00405 PF01435 Peptidase family M48 BEN78_00410 PF00486 Transcriptional regulatory protein, C terminal BEN78_00410 PF00072 Response regulator receiver domain BEN78_00415 PF11808 Phosphate regulon sensor protein PhoR BEN78_00415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN78_00415 PF00989 PAS fold BEN78_00415 PF00512 His Kinase A (phospho-acceptor) domain BEN78_00420 PF13089 Polyphosphate kinase N-terminal domain BEN78_00420 PF02503 Polyphosphate kinase middle domain BEN78_00420 PF17941 Polyphosphate kinase C-terminal domain 1 BEN78_00420 PF13090 Polyphosphate kinase C-terminal domain 2 BEN78_00425 PF02541 Ppx/GppA phosphatase family BEN78_00430 PF13439 Glycosyltransferase Family 4 BEN78_00430 PF00534 Glycosyl transferases group 1 BEN78_00435 PF01569 PAP2 superfamily BEN78_00440 PF06123 Inner membrane protein CreD BEN78_00445 PF00512 His Kinase A (phospho-acceptor) domain BEN78_00445 PF00672 HAMP domain BEN78_00445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN78_00450 PF00072 Response regulator receiver domain BEN78_00450 PF00486 Transcriptional regulatory protein, C terminal BEN78_00455 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ BEN78_00465 PF02559 CarD-like/TRCF domain BEN78_00465 PF17757 UvrB interaction domain BEN78_00465 PF03461 TRCF domain BEN78_00465 PF00271 Helicase conserved C-terminal domain BEN78_00465 PF00270 DEAD/DEAH box helicase BEN78_00470 PF00072 Response regulator receiver domain BEN78_00490 PF07687 Peptidase dimerisation domain BEN78_00490 PF01546 Peptidase family M20/M25/M40 BEN78_00495 PF03960 ArsC family BEN78_00500 PF00132 Bacterial transferase hexapeptide (six repeats) BEN78_00500 PF14602 Hexapeptide repeat of succinyl-transferase BEN78_00500 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal BEN78_00505 PF01966 HD domain BEN78_00505 PF08335 GlnD PII-uridylyltransferase BEN78_00505 PF01909 Nucleotidyltransferase domain BEN78_00510 PF00557 Metallopeptidase family M24 BEN78_00540 PF00318 Ribosomal protein S2 BEN78_00545 PF00889 Elongation factor TS BEN78_00560 PF00483 Nucleotidyl transferase BEN78_00570 PF00953 Glycosyl transferase family 4 BEN78_00575 PF18073 Rubredoxin metal binding domain BEN78_00580 PF00216 Bacterial DNA-binding protein BEN78_00585 PF00575 S1 RNA binding domain BEN78_00590 PF02224 Cytidylate kinase BEN78_00595 PF00444 Ribosomal protein L36 BEN78_00605 PF04371 Porphyromonas-type peptidyl-arginine deiminase BEN78_00610 PF00144 Beta-lactamase BEN78_00615 PF00795 Carbon-nitrogen hydrolase BEN78_00630 PF00873 AcrB/AcrD/AcrF family BEN78_00635 PF00873 AcrB/AcrD/AcrF family BEN78_00640 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BEN78_00650 PF00034 Cytochrome c BEN78_00660 PF01106 NifU-like domain BEN78_00665 PF01329 Pterin 4 alpha carbinolamine dehydratase BEN78_00680 PF12111 Polyribonucleotide phosphorylase C terminal BEN78_00680 PF10150 Ribonuclease E/G family BEN78_00680 PF00575 S1 RNA binding domain BEN78_00690 PF00196 Bacterial regulatory proteins, luxR family BEN78_00690 PF00072 Response regulator receiver domain BEN78_00695 PF02630 SCO1/SenC BEN78_00700 PF00155 Aminotransferase class I and II BEN78_00705 PF00005 ABC transporter BEN78_00710 PF03379 CcmB protein BEN78_00715 PF01578 Cytochrome C assembly protein BEN78_00725 PF03100 CcmE BEN78_00735 PF08534 Redoxin BEN78_00740 PF03918 Cytochrome C biogenesis protein BEN78_00780 PF04024 PspC domain BEN78_00790 PF09712 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) BEN78_00800 PF01066 CDP-alcohol phosphatidyltransferase BEN78_00840 PF00196 Bacterial regulatory proteins, luxR family BEN78_00840 PF00072 Response regulator receiver domain BEN78_00845 PF07730 Histidine kinase BEN78_00855 PF05209 Septum formation inhibitor MinC, N-terminal domain BEN78_00855 PF03775 Septum formation inhibitor MinC, C-terminal domain BEN78_00860 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BEN78_00865 PF03776 Septum formation topological specificity factor MinE BEN78_00880 PF07690 Major Facilitator Superfamily BEN78_00895 PF02347 Glycine cleavage system P-protein BEN78_00905 PF05974 Domain of unknown function (DUF892) BEN78_00915 PF01266 FAD dependent oxidoreductase BEN78_00920 PF18011 C-terminal domain found in long catalases BEN78_00920 PF06628 Catalase-related immune-responsive BEN78_00920 PF00199 Catalase BEN78_00925 PF00989 PAS fold BEN78_00925 PF00990 Diguanylate cyclase, GGDEF domain BEN78_00925 PF01590 GAF domain BEN78_00925 PF00563 EAL domain BEN78_00950 PF01765 Ribosome recycling factor BEN78_00955 PF01255 Putative undecaprenyl diphosphate synthase BEN78_00965 PF13288 DXP reductoisomerase C-terminal domain BEN78_00965 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BEN78_00965 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BEN78_00970 PF02163 Peptidase family M50 BEN78_00970 PF17820 PDZ domain BEN78_00975 PF07244 Surface antigen variable number repeat BEN78_00975 PF01103 Surface antigen BEN78_00980 PF00132 Bacterial transferase hexapeptide (six repeats) BEN78_00980 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BEN78_00985 PF07977 FabA-like domain BEN78_00990 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BEN78_00990 PF00132 Bacterial transferase hexapeptide (six repeats) BEN78_00995 PF02684 Lipid-A-disaccharide synthetase BEN78_01000 PF01351 Ribonuclease HII BEN78_01005 PF07733 Bacterial DNA polymerase III alpha NTPase domain BEN78_01005 PF01336 OB-fold nucleic acid binding domain BEN78_01005 PF02811 PHP domain BEN78_01005 PF14579 Helix-hairpin-helix motif BEN78_01005 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BEN78_01015 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BEN78_01020 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BEN78_01025 PF09179 TilS substrate binding domain BEN78_01025 PF01171 PP-loop family BEN78_01025 PF11734 TilS substrate C-terminal domain BEN78_01030 PF02609 Exonuclease VII small subunit BEN78_01035 PF00348 Polyprenyl synthetase BEN78_01055 PF01523 Putative modulator of DNA gyrase BEN78_01060 PF04751 Protein of unknown function (DUF615) BEN78_01065 PF01523 Putative modulator of DNA gyrase BEN78_01075 PF10150 Ribonuclease E/G family BEN78_01075 PF00575 S1 RNA binding domain BEN78_01080 PF02545 Maf-like protein BEN78_01085 PF04402 Protein of unknown function (DUF541) BEN78_01105 PF02599 Global regulator protein family BEN78_01110 PF02272 DHHA1 domain BEN78_01110 PF01411 tRNA synthetases class II (A) BEN78_01110 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BEN78_01115 PF02631 RecX family BEN78_01120 PF00154 recA bacterial DNA recombination protein BEN78_01125 PF00717 Peptidase S24-like BEN78_01125 PF01726 LexA DNA binding domain BEN78_01130 PF01142 tRNA pseudouridine synthase D (TruD) BEN78_01135 PF02542 YgbB family BEN78_01140 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BEN78_01145 PF04977 Septum formation initiator BEN78_01150 PF03952 Enolase, N-terminal domain BEN78_01150 PF00113 Enolase, C-terminal TIM barrel domain BEN78_01155 PF00793 DAHP synthetase I family BEN78_01165 PF00117 Glutamine amidotransferase class-I BEN78_01165 PF06418 CTP synthase N-terminus BEN78_01175 PF00986 DNA gyrase B subunit, carboxyl terminus BEN78_01175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN78_01175 PF00204 DNA gyrase B BEN78_01175 PF01751 Toprim domain BEN78_01180 PF07690 Major Facilitator Superfamily BEN78_01190 PF07715 TonB-dependent Receptor Plug Domain BEN78_01190 PF00593 TonB dependent receptor BEN78_01195 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BEN78_01195 PF00356 Bacterial regulatory proteins, lacI family BEN78_01215 PF01850 PIN domain BEN78_01220 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BEN78_01220 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN78_01225 PF01266 FAD dependent oxidoreductase BEN78_01230 PF04235 Protein of unknown function (DUF418) BEN78_01235 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BEN78_01240 PF00877 NlpC/P60 family BEN78_01245 PF00877 NlpC/P60 family BEN78_01265 PF08220 DeoR-like helix-turn-helix domain BEN78_01265 PF00455 DeoR C terminal sensor domain BEN78_01270 PF07690 Major Facilitator Superfamily BEN78_01280 PF00561 alpha/beta hydrolase fold BEN78_01315 PF07726 ATPase family associated with various cellular activities (AAA) BEN78_01315 PF17863 AAA lid domain BEN78_01345 PF00392 Bacterial regulatory proteins, gntR family BEN78_01345 PF07729 FCD domain BEN78_01355 PF14592 Chondroitinase B BEN78_01360 PF05426 Alginate lyase BEN78_01360 PF07940 Heparinase II/III-like protein BEN78_01365 PF07690 Major Facilitator Superfamily BEN78_01385 PF03459 TOBE domain BEN78_01385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN78_01390 PF07690 Major Facilitator Superfamily BEN78_01395 PF02634 FdhD/NarQ family BEN78_01400 PF00384 Molybdopterin oxidoreductase BEN78_01425 PF04616 Glycosyl hydrolases family 43 BEN78_01445 PF00331 Glycosyl hydrolase family 10 BEN78_01445 PF00553 Cellulose binding domain BEN78_01445 PF03422 Carbohydrate binding module (family 6) BEN78_01455 PF02614 Glucuronate isomerase BEN78_01460 PF00331 Glycosyl hydrolase family 10 BEN78_01470 PF01479 S4 domain BEN78_01470 PF00849 RNA pseudouridylate synthase BEN78_01480 PF08450 SMP-30/Gluconolactonase/LRE-like region BEN78_01485 PF13460 NAD(P)H-binding BEN78_01510 PF00144 Beta-lactamase BEN78_01525 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BEN78_01530 PF00672 HAMP domain BEN78_01530 PF00512 His Kinase A (phospho-acceptor) domain BEN78_01530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN78_01535 PF00486 Transcriptional regulatory protein, C terminal BEN78_01535 PF00072 Response regulator receiver domain BEN78_01540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BEN78_01540 PF00529 HlyD membrane-fusion protein of T1SS BEN78_01560 PF01232 Mannitol dehydrogenase Rossmann domain BEN78_01560 PF08125 Mannitol dehydrogenase C-terminal domain BEN78_01565 PF04616 Glycosyl hydrolases family 43 BEN78_01565 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BEN78_01570 PF13378 Enolase C-terminal domain-like BEN78_01570 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BEN78_01580 PF03648 Glycosyl hydrolase family 67 N-terminus BEN78_01580 PF07488 Glycosyl hydrolase family 67 middle domain BEN78_01580 PF07477 Glycosyl hydrolase family 67 C-terminus BEN78_01585 PF00356 Bacterial regulatory proteins, lacI family BEN78_01595 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BEN78_01595 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BEN78_01630 PF00037 4Fe-4S binding domain BEN78_01640 PF01467 Cytidylyltransferase-like BEN78_01650 PF00448 SRP54-type protein, GTPase domain BEN78_01650 PF02881 SRP54-type protein, helical bundle domain BEN78_01660 PF14815 NUDIX domain BEN78_01660 PF00730 HhH-GPD superfamily base excision DNA repair protein BEN78_01660 PF10576 Iron-sulfur binding domain of endonuclease III BEN78_01660 PF00633 Helix-hairpin-helix motif BEN78_01665 PF04362 Bacterial Fe(2+) trafficking BEN78_01680 PF00717 Peptidase S24-like BEN78_01700 PF02770 Acyl-CoA dehydrogenase, middle domain BEN78_01700 PF12806 Acetyl-CoA dehydrogenase C-terminal like BEN78_01700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN78_01700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN78_01710 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BEN78_01710 PF02779 Transketolase, pyrimidine binding domain BEN78_01710 PF02780 Transketolase, C-terminal domain BEN78_01720 PF07237 Protein of unknown function (DUF1428) BEN78_01740 PF13411 MerR HTH family regulatory protein BEN78_01745 PF00216 Bacterial DNA-binding protein BEN78_01755 PF01409 tRNA synthetases class II core domain (F) BEN78_01755 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BEN78_01760 PF00453 Ribosomal protein L20 BEN78_01765 PF01632 Ribosomal protein L35 BEN78_01770 PF00707 Translation initiation factor IF-3, C-terminal domain BEN78_01770 PF05198 Translation initiation factor IF-3, N-terminal domain BEN78_01775 PF02824 TGS domain BEN78_01775 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BEN78_01775 PF03129 Anticodon binding domain BEN78_01775 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BEN78_01780 PF00356 Bacterial regulatory proteins, lacI family BEN78_01790 PF00127 Copper binding proteins, plastocyanin/azurin family BEN78_01795 PF07732 Multicopper oxidase BEN78_01795 PF00394 Multicopper oxidase BEN78_01810 PF13673 Acetyltransferase (GNAT) domain BEN78_01815 PF00115 Cytochrome C and Quinol oxidase polypeptide I BEN78_01825 PF00325 Bacterial regulatory proteins, crp family BEN78_01825 PF00027 Cyclic nucleotide-binding domain BEN78_01830 PF06969 HemN C-terminal domain BEN78_01830 PF04055 Radical SAM superfamily BEN78_01835 PF00128 Alpha amylase, catalytic domain BEN78_01835 PF00686 Starch binding domain BEN78_01845 PF00128 Alpha amylase, catalytic domain BEN78_01850 PF17967 Pullulanase N2 domain BEN78_01850 PF11852 Domain of unknown function (DUF3372) BEN78_01850 PF18494 Pullulanase Ins domain BEN78_01850 PF03714 Bacterial pullanase-associated domain BEN78_01850 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BEN78_01855 PF00106 short chain dehydrogenase BEN78_01865 PF00857 Isochorismatase family BEN78_01865 PF00550 Phosphopantetheine attachment site BEN78_01870 PF00857 Isochorismatase family BEN78_01870 PF00550 Phosphopantetheine attachment site BEN78_01875 PF13193 AMP-binding enzyme C-terminal domain BEN78_01875 PF00501 AMP-binding enzyme BEN78_01880 PF00425 chorismate binding enzyme BEN78_01895 PF00593 TonB dependent receptor BEN78_01895 PF07715 TonB-dependent Receptor Plug Domain BEN78_01900 PF00756 Putative esterase BEN78_01910 PF01497 Periplasmic binding protein BEN78_01915 PF01032 FecCD transport family BEN78_01920 PF00005 ABC transporter BEN78_01930 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BEN78_01930 PF02222 ATP-grasp domain BEN78_01935 PF00731 AIR carboxylase BEN78_01940 PF03966 Trm112p-like protein BEN78_01945 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BEN78_01945 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BEN78_01960 PF00043 Glutathione S-transferase, C-terminal domain BEN78_01960 PF13417 Glutathione S-transferase, N-terminal domain BEN78_01965 PF02167 Cytochrome C1 family BEN78_01970 PF00032 Cytochrome b(C-terminal)/b6/petD BEN78_01970 PF00033 Cytochrome b/b6/petB BEN78_01975 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal BEN78_01975 PF00355 Rieske [2Fe-2S] domain BEN78_01980 PF01464 Transglycosylase SLT domain BEN78_01985 PF04055 Radical SAM superfamily BEN78_01985 PF00919 Uncharacterized protein family UPF0004 BEN78_01985 PF01938 TRAM domain BEN78_01990 PF00005 ABC transporter BEN78_01995 PF00005 ABC transporter BEN78_02005 PF08361 MAATS-type transcriptional repressor, C-terminal region BEN78_02005 PF00440 Bacterial regulatory proteins, tetR family BEN78_02010 PF02562 PhoH-like protein BEN78_02020 PF02130 Uncharacterized protein family UPF0054 BEN78_02030 PF00571 CBS domain BEN78_02030 PF03471 Transporter associated domain BEN78_02040 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation BEN78_02040 PF10566 Glycoside hydrolase 97 BEN78_02040 PF14508 Glycosyl-hydrolase 97 N-terminal BEN78_02050 PF06055 Exopolysaccharide synthesis, ExoD BEN78_02055 PF02554 Carbon starvation protein CstA BEN78_02055 PF13722 5TM C-terminal transporter carbon starvation CstA BEN78_02060 PF04328 Selenoprotein, putative BEN78_02075 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region BEN78_02075 PF07676 WD40-like Beta Propeller Repeat BEN78_02075 PF00326 Prolyl oligopeptidase family BEN78_02080 PF00326 Prolyl oligopeptidase family BEN78_02085 PF00854 POT family BEN78_02095 PF08019 Phosphoethanolamine transferase EptA/EptB BEN78_02095 PF00884 Sulfatase BEN78_02100 PF00072 Response regulator receiver domain BEN78_02100 PF00486 Transcriptional regulatory protein, C terminal BEN78_02105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN78_02105 PF00512 His Kinase A (phospho-acceptor) domain BEN78_02110 PF01219 Prokaryotic diacylglycerol kinase BEN78_02115 PF00436 Single-strand binding protein family BEN78_02120 PF00348 Polyprenyl synthetase BEN78_02145 PF00696 Amino acid kinase family BEN78_02145 PF01842 ACT domain BEN78_02150 PF02567 Phenazine biosynthesis-like protein BEN78_02155 PF02566 OsmC-like protein BEN78_02170 PF01551 Peptidase family M23 BEN78_02195 PF02082 Transcriptional regulator BEN78_02200 PF01458 Uncharacterized protein family (UPF0051) BEN78_02205 PF00005 ABC transporter BEN78_02215 PF00266 Aminotransferase class-V BEN78_02225 PF00355 Rieske [2Fe-2S] domain BEN78_02235 PF00593 TonB dependent receptor BEN78_02235 PF07715 TonB-dependent Receptor Plug Domain BEN78_02250 PF07687 Peptidase dimerisation domain BEN78_02250 PF01546 Peptidase family M20/M25/M40 BEN78_02260 PF00483 Nucleotidyl transferase BEN78_02270 PF01597 Glycine cleavage H-protein BEN78_02275 PF01571 Aminomethyltransferase folate-binding domain BEN78_02275 PF08669 Glycine cleavage T-protein C-terminal barrel domain BEN78_02285 PF01145 SPFH domain / Band 7 family BEN78_02285 PF16200 C-terminal region of band_7 BEN78_02300 PF00593 TonB dependent receptor BEN78_02300 PF07715 TonB-dependent Receptor Plug Domain BEN78_02310 PF00248 Aldo/keto reductase family BEN78_02315 PF07662 Na+ dependent nucleoside transporter C-terminus BEN78_02315 PF01773 Na+ dependent nucleoside transporter N-terminus BEN78_02315 PF07670 Nucleoside recognition BEN78_02320 PF00294 pfkB family carbohydrate kinase BEN78_02330 PF01207 Dihydrouridine synthase (Dus) BEN78_02340 PF04151 Bacterial pre-peptidase C-terminal domain BEN78_02340 PF00082 Subtilase family BEN78_02345 PF00438 S-adenosylmethionine synthetase, N-terminal domain BEN78_02345 PF02772 S-adenosylmethionine synthetase, central domain BEN78_02345 PF02773 S-adenosylmethionine synthetase, C-terminal domain BEN78_02350 PF14403 Circularly permuted ATP-grasp type 2 BEN78_02370 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BEN78_02370 PF05221 S-adenosyl-L-homocysteine hydrolase BEN78_02385 PF08013 Tagatose 6 phosphate kinase BEN78_02390 PF01380 SIS domain BEN78_02405 PF02219 Methylenetetrahydrofolate reductase BEN78_02415 PF00512 His Kinase A (phospho-acceptor) domain BEN78_02415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN78_02415 PF00672 HAMP domain BEN78_02420 PF00486 Transcriptional regulatory protein, C terminal BEN78_02420 PF00072 Response regulator receiver domain BEN78_02430 PF08443 RimK-like ATP-grasp domain BEN78_02430 PF18030 RimK PreATP-grasp domain BEN78_02440 PF00657 GDSL-like Lipase/Acylhydrolase BEN78_02440 PF03797 Autotransporter beta-domain BEN78_02450 PF05690 Thiazole biosynthesis protein ThiG BEN78_02455 PF02390 Putative methyltransferase BEN78_02475 PF01557 Fumarylacetoacetate (FAA) hydrolase family BEN78_02480 PF01741 Large-conductance mechanosensitive channel, MscL BEN78_02490 PF08032 RNA 2'-O ribose methyltransferase substrate binding BEN78_02490 PF00588 SpoU rRNA Methylase family BEN78_02495 PF01235 Sodium:alanine symporter family BEN78_02505 PF00873 AcrB/AcrD/AcrF family BEN78_02510 PF13533 Biotin-lipoyl like BEN78_02515 PF00291 Pyridoxal-phosphate dependent enzyme BEN78_02525 PF01661 Macro domain BEN78_02530 PF00274 Fructose-bisphosphate aldolase class-I BEN78_02535 PF02887 Pyruvate kinase, alpha/beta domain BEN78_02535 PF00224 Pyruvate kinase, barrel domain BEN78_02545 PF00162 Phosphoglycerate kinase BEN78_02560 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BEN78_02560 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BEN78_02565 PF03922 OmpW family BEN78_02575 PF00753 Metallo-beta-lactamase superfamily BEN78_02590 PF00528 Binding-protein-dependent transport system inner membrane component BEN78_02595 PF00005 ABC transporter BEN78_02595 PF03459 TOBE domain BEN78_02610 PF07715 TonB-dependent Receptor Plug Domain BEN78_02610 PF00593 TonB dependent receptor BEN78_02625 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BEN78_02625 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BEN78_02630 PF01722 BolA-like protein BEN78_02635 PF00456 Transketolase, thiamine diphosphate binding domain BEN78_02635 PF02779 Transketolase, pyrimidine binding domain BEN78_02635 PF02780 Transketolase, C-terminal domain BEN78_02640 PF00375 Sodium:dicarboxylate symporter family BEN78_02645 PF09382 RQC domain BEN78_02645 PF00570 HRDC domain BEN78_02645 PF00271 Helicase conserved C-terminal domain BEN78_02645 PF00270 DEAD/DEAH box helicase BEN78_02645 PF16124 RecQ zinc-binding BEN78_02665 PF01389 OmpA-like transmembrane domain BEN78_02665 PF00691 OmpA family BEN78_02670 PF00486 Transcriptional regulatory protein, C terminal BEN78_02670 PF00072 Response regulator receiver domain BEN78_02675 PF00270 DEAD/DEAH box helicase BEN78_02675 PF08494 DEAD/H associated BEN78_02675 PF00271 Helicase conserved C-terminal domain BEN78_02690 PF06508 Queuosine biosynthesis protein QueC BEN78_02695 PF04055 Radical SAM superfamily BEN78_02705 PF00691 OmpA family BEN78_02710 PF04052 TolB amino-terminal domain BEN78_02710 PF07676 WD40-like Beta Propeller Repeat BEN78_02725 PF02472 Biopolymer transport protein ExbD/TolR BEN78_02730 PF01618 MotA/TolQ/ExbB proton channel family BEN78_02735 PF03061 Thioesterase superfamily BEN78_02740 PF05491 RuvB C-terminal winged helix domain BEN78_02740 PF05496 Holliday junction DNA helicase RuvB P-loop domain BEN78_02740 PF17864 RuvB AAA lid domain BEN78_02745 PF00296 Luciferase-like monooxygenase BEN78_02780 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase BEN78_02785 PF00072 Response regulator receiver domain BEN78_02785 PF00990 Diguanylate cyclase, GGDEF domain BEN78_02790 PF02705 K+ potassium transporter BEN78_02795 PF01330 RuvA N terminal domain BEN78_02795 PF07499 RuvA, C-terminal domain BEN78_02800 PF02075 Crossover junction endodeoxyribonuclease RuvC BEN78_02805 PF01709 Transcriptional regulator BEN78_02815 PF12852 Cupin BEN78_02815 PF12833 Helix-turn-helix domain BEN78_02820 PF02566 OsmC-like protein BEN78_02830 PF03264 NapC/NirT cytochrome c family, N-terminal region BEN78_02835 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) BEN78_02840 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BEN78_02840 PF01568 Molydopterin dinucleotide binding domain BEN78_02840 PF00384 Molybdopterin oxidoreductase BEN78_02860 PF01336 OB-fold nucleic acid binding domain BEN78_02860 PF00152 tRNA synthetases class II (D, K and N) BEN78_02860 PF02938 GAD domain BEN78_02875 PF03466 LysR substrate binding domain BEN78_02875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN78_02885 PF12848 ABC transporter BEN78_02885 PF00005 ABC transporter BEN78_02890 PF07715 TonB-dependent Receptor Plug Domain BEN78_02890 PF00593 TonB dependent receptor BEN78_02895 PF00999 Sodium/hydrogen exchanger family BEN78_02895 PF02254 TrkA-N domain BEN78_02900 PF08338 Domain of unknown function (DUF1731) BEN78_02900 PF01370 NAD dependent epimerase/dehydratase family BEN78_02905 PF10431 C-terminal, D2-small domain, of ClpB protein BEN78_02905 PF17871 AAA lid domain BEN78_02905 PF07724 AAA domain (Cdc48 subfamily) BEN78_02905 PF00004 ATPase family associated with various cellular activities (AAA) BEN78_02905 PF02861 Clp amino terminal domain, pathogenicity island component BEN78_02920 PF00723 Glycosyl hydrolases family 15 BEN78_02925 PF00982 Glycosyltransferase family 20 BEN78_02930 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BEN78_02950 PF07715 TonB-dependent Receptor Plug Domain BEN78_02950 PF00593 TonB dependent receptor BEN78_02965 PF13525 Outer membrane lipoprotein BEN78_02985 PF07715 TonB-dependent Receptor Plug Domain BEN78_02985 PF00593 TonB dependent receptor BEN78_03005 PF00535 Glycosyl transferase family 2 BEN78_03010 PF00535 Glycosyl transferase family 2 BEN78_03015 PF01029 NusB family BEN78_03015 PF01189 16S rRNA methyltransferase RsmB/F BEN78_03020 PF00551 Formyl transferase BEN78_03020 PF02911 Formyl transferase, C-terminal domain BEN78_03025 PF01327 Polypeptide deformylase BEN78_03030 PF01476 LysM domain BEN78_03035 PF02481 DNA recombination-mediator protein A BEN78_03035 PF17782 DprA winged helix domain BEN78_03040 PF04361 Protein of unknown function (DUF494) BEN78_03050 PF01131 DNA topoisomerase BEN78_03050 PF01751 Toprim domain BEN78_03050 PF13368 Topoisomerase C-terminal repeat BEN78_03055 PF01300 Telomere recombination BEN78_03060 PF00310 Glutamine amidotransferases class-II BEN78_03060 PF01493 GXGXG motif BEN78_03060 PF01645 Conserved region in glutamate synthase BEN78_03060 PF04898 Glutamate synthase central domain BEN78_03065 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN78_03065 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BEN78_03090 PF00657 GDSL-like Lipase/Acylhydrolase BEN78_03105 PF04962 KduI/IolB family BEN78_03110 PF00356 Bacterial regulatory proteins, lacI family BEN78_03115 PF04616 Glycosyl hydrolases family 43 BEN78_03115 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BEN78_03120 PF02142 MGS-like domain BEN78_03125 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BEN78_03135 PF03480 Bacterial extracellular solute-binding protein, family 7 BEN78_03170 PF00294 pfkB family carbohydrate kinase BEN78_03175 PF01343 Peptidase family S49 BEN78_03180 PF01554 MatE BEN78_03210 PF00583 Acetyltransferase (GNAT) family BEN78_03220 PF01066 CDP-alcohol phosphatidyltransferase BEN78_03230 PF03129 Anticodon binding domain BEN78_03230 PF04073 Aminoacyl-tRNA editing domain BEN78_03230 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BEN78_03245 PF02405 Permease MlaE BEN78_03250 PF00005 ABC transporter BEN78_03250 PF09383 NIL domain BEN78_03255 PF03886 ABC-type transport auxiliary lipoprotein component BEN78_03255 PF02470 MlaD protein BEN78_03270 PF01144 Coenzyme A transferase BEN78_03275 PF01144 Coenzyme A transferase BEN78_03280 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BEN78_03280 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BEN78_03280 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BEN78_03280 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BEN78_03285 PF00483 Nucleotidyl transferase BEN78_03285 PF01050 Mannose-6-phosphate isomerase BEN78_03290 PF04321 RmlD substrate binding domain BEN78_03295 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BEN78_03300 PF00483 Nucleotidyl transferase BEN78_03305 PF16363 GDP-mannose 4,6 dehydratase BEN78_03310 PF01012 Electron transfer flavoprotein domain BEN78_03315 PF01012 Electron transfer flavoprotein domain BEN78_03315 PF00766 Electron transfer flavoprotein FAD-binding domain BEN78_03325 PF01053 Cys/Met metabolism PLP-dependent enzyme BEN78_03335 PF00005 ABC transporter BEN78_03350 PF00571 CBS domain BEN78_03350 PF00291 Pyridoxal-phosphate dependent enzyme BEN78_03370 PF00437 Type II/IV secretion system protein BEN78_03395 PF00380 Ribosomal protein S9/S16 BEN78_03400 PF00572 Ribosomal protein L13 BEN78_03405 PF03232 Ubiquinone biosynthesis protein COQ7 BEN78_03410 PF02675 S-adenosylmethionine decarboxylase BEN78_03415 PF00027 Cyclic nucleotide-binding domain BEN78_03415 PF00325 Bacterial regulatory proteins, crp family BEN78_03425 PF01925 Sulfite exporter TauE/SafE BEN78_03435 PF02885 Glycosyl transferase family, helical bundle domain BEN78_03435 PF00591 Glycosyl transferase family, a/b domain BEN78_03445 PF00117 Glutamine amidotransferase class-I BEN78_03455 PF00425 chorismate binding enzyme BEN78_03455 PF04715 Anthranilate synthase component I, N terminal region BEN78_03465 PF00834 Ribulose-phosphate 3 epimerase family BEN78_03470 PF05099 Tellurite resistance protein TerB BEN78_03470 PF00226 DnaJ domain BEN78_03475 PF01259 SAICAR synthetase BEN78_03480 PF00144 Beta-lactamase BEN78_03495 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BEN78_03495 PF00361 Proton-conducting membrane transporter BEN78_03495 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter BEN78_03495 PF13244 Domain of unknown function (DUF4040) BEN78_03500 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BEN78_03505 PF00361 Proton-conducting membrane transporter BEN78_03510 PF01899 Na+/H+ ion antiporter subunit BEN78_03515 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) BEN78_03520 PF03334 Na+/H+ antiporter subunit BEN78_03530 PF04209 homogentisate 1,2-dioxygenase BEN78_03535 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BEN78_03545 PF00854 POT family BEN78_03560 PF04542 Sigma-70 region 2 BEN78_03560 PF08281 Sigma-70, region 4 BEN78_03570 PF03806 AbgT putative transporter family BEN78_03580 PF03301 Tryptophan 2,3-dioxygenase BEN78_03615 PF00579 tRNA synthetases class I (W and Y) BEN78_03620 PF05532 CsbD-like BEN78_03630 PF00491 Arginase family BEN78_03655 PF03309 Type III pantothenate kinase BEN78_03675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN78_03675 PF08918 PhoQ Sensor BEN78_03680 PF00486 Transcriptional regulatory protein, C terminal BEN78_03680 PF00072 Response regulator receiver domain BEN78_03690 PF01207 Dihydrouridine synthase (Dus) BEN78_03700 PF00128 Alpha amylase, catalytic domain BEN78_03700 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BEN78_03710 PF00128 Alpha amylase, catalytic domain BEN78_03715 PF02446 4-alpha-glucanotransferase BEN78_03720 PF11941 Domain of unknown function (DUF3459) BEN78_03720 PF00128 Alpha amylase, catalytic domain BEN78_03720 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BEN78_03725 PF02806 Alpha amylase, C-terminal all-beta domain BEN78_03725 PF00128 Alpha amylase, catalytic domain BEN78_03725 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BEN78_03730 PF08323 Starch synthase catalytic domain BEN78_03730 PF00534 Glycosyl transferases group 1 BEN78_03760 PF02954 Bacterial regulatory protein, Fis family BEN78_03765 PF02142 MGS-like domain BEN78_03765 PF01808 AICARFT/IMPCHase bienzyme BEN78_03775 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BEN78_03775 PF02843 Phosphoribosylglycinamide synthetase, C domain BEN78_03775 PF02844 Phosphoribosylglycinamide synthetase, N domain BEN78_03780 PF12805 FUSC-like inner membrane protein yccS BEN78_03785 PF03061 Thioesterase superfamily BEN78_03790 PF07690 Major Facilitator Superfamily BEN78_03805 PF00293 NUDIX domain BEN78_03805 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain BEN78_03805 PF09297 NADH pyrophosphatase zinc ribbon domain BEN78_03810 PF01521 Iron-sulphur cluster biosynthesis BEN78_03825 PF00072 Response regulator receiver domain BEN78_03825 PF00990 Diguanylate cyclase, GGDEF domain BEN78_03825 PF00563 EAL domain BEN78_03830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN78_03830 PF00512 His Kinase A (phospho-acceptor) domain BEN78_03830 PF00672 HAMP domain BEN78_03830 PF01627 Hpt domain BEN78_03830 PF00072 Response regulator receiver domain BEN78_03830 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BEN78_03835 PF00210 Ferritin-like domain BEN78_03845 PF00293 NUDIX domain BEN78_03855 PF00326 Prolyl oligopeptidase family BEN78_03855 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BEN78_03860 PF00326 Prolyl oligopeptidase family BEN78_03860 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BEN78_03890 PF03900 Porphobilinogen deaminase, C-terminal domain BEN78_03890 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BEN78_03895 PF04397 LytTr DNA-binding domain BEN78_03895 PF00072 Response regulator receiver domain BEN78_03905 PF13632 Glycosyl transferase family group 2 BEN78_03960 PF01380 SIS domain BEN78_03975 PF00005 ABC transporter BEN78_03985 PF12704 MacB-like periplasmic core domain BEN78_03985 PF02687 FtsX-like permease family BEN78_03990 PF12704 MacB-like periplasmic core domain BEN78_03990 PF02687 FtsX-like permease family BEN78_03990 PF00005 ABC transporter BEN78_03995 PF12704 MacB-like periplasmic core domain BEN78_03995 PF00005 ABC transporter BEN78_03995 PF02687 FtsX-like permease family BEN78_04000 PF12704 MacB-like periplasmic core domain BEN78_04000 PF02687 FtsX-like permease family BEN78_04005 PF02687 FtsX-like permease family BEN78_04005 PF12704 MacB-like periplasmic core domain BEN78_04015 PF12704 MacB-like periplasmic core domain BEN78_04015 PF02687 FtsX-like permease family BEN78_04020 PF00158 Sigma-54 interaction domain BEN78_04020 PF00072 Response regulator receiver domain BEN78_04025 PF00672 HAMP domain BEN78_04025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN78_04045 PF00691 OmpA family BEN78_04045 PF01389 OmpA-like transmembrane domain BEN78_04050 PF14602 Hexapeptide repeat of succinyl-transferase BEN78_04050 PF12804 MobA-like NTP transferase domain BEN78_04050 PF00132 Bacterial transferase hexapeptide (six repeats) BEN78_04065 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BEN78_04065 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BEN78_04070 PF02874 ATP synthase alpha/beta family, beta-barrel domain BEN78_04070 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BEN78_04075 PF00231 ATP synthase BEN78_04080 PF00306 ATP synthase alpha/beta chain, C terminal domain BEN78_04080 PF02874 ATP synthase alpha/beta family, beta-barrel domain BEN78_04080 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BEN78_04085 PF00213 ATP synthase delta (OSCP) subunit BEN78_04090 PF00430 ATP synthase B/B' CF(0) BEN78_04095 PF00137 ATP synthase subunit C BEN78_04100 PF00119 ATP synthase A chain BEN78_04135 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BEN78_04135 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN78_04140 PF00364 Biotin-requiring enzyme BEN78_04140 PF02817 e3 binding domain BEN78_04140 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BEN78_04145 PF00583 Acetyltransferase (GNAT) family BEN78_04145 PF00795 Carbon-nitrogen hydrolase BEN78_04170 PF08240 Alcohol dehydrogenase GroES-like domain BEN78_04170 PF00107 Zinc-binding dehydrogenase BEN78_04175 PF04461 Protein of unknown function (DUF520) BEN78_04195 PF01545 Cation efflux family BEN78_04200 PF01022 Bacterial regulatory protein, arsR family BEN78_04205 PF12833 Helix-turn-helix domain BEN78_04205 PF01965 DJ-1/PfpI family BEN78_04210 PF13419 Haloacid dehalogenase-like hydrolase BEN78_04215 PF07977 FabA-like domain BEN78_04220 PF00109 Beta-ketoacyl synthase, N-terminal domain BEN78_04220 PF02801 Beta-ketoacyl synthase, C-terminal domain BEN78_04225 PF00849 RNA pseudouridylate synthase BEN78_04225 PF01479 S4 domain BEN78_04230 PF05175 Methyltransferase small domain BEN78_04230 PF08468 Methyltransferase small domain N-terminal BEN78_04245 PF00005 ABC transporter BEN78_04250 PF13472 GDSL-like Lipase/Acylhydrolase family BEN78_04255 PF01551 Peptidase family M23 BEN78_04255 PF04225 Opacity-associated protein A LysM-like domain BEN78_04260 PF03734 L,D-transpeptidase catalytic domain BEN78_04260 PF01476 LysM domain BEN78_04285 PF01139 tRNA-splicing ligase RtcB BEN78_04295 PF02028 BCCT, betaine/carnitine/choline family transporter BEN78_04325 PF17863 AAA lid domain BEN78_04325 PF07726 ATPase family associated with various cellular activities (AAA) BEN78_04350 PF00132 Bacterial transferase hexapeptide (six repeats) BEN78_04355 PF00884 Sulfatase BEN78_04360 PF00486 Transcriptional regulatory protein, C terminal BEN78_04360 PF00072 Response regulator receiver domain BEN78_04365 PF00512 His Kinase A (phospho-acceptor) domain BEN78_04365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN78_04370 PF03372 Endonuclease/Exonuclease/phosphatase family BEN78_04390 PF02527 rRNA small subunit methyltransferase G BEN78_04395 PF13614 AAA domain BEN78_04400 PF17762 HTH domain found in ParB protein BEN78_04400 PF02195 ParB-like nuclease domain BEN78_04420 PF00873 AcrB/AcrD/AcrF family BEN78_04425 PF07690 Major Facilitator Superfamily BEN78_04445 PF00593 TonB dependent receptor BEN78_04445 PF07715 TonB-dependent Receptor Plug Domain BEN78_04505 PF07715 TonB-dependent Receptor Plug Domain BEN78_04505 PF00593 TonB dependent receptor BEN78_04530 PF17831 Pyruvate dehydrogenase E1 component middle domain BEN78_04530 PF00456 Transketolase, thiamine diphosphate binding domain BEN78_04535 PF08446 PAS fold BEN78_04535 PF01590 GAF domain BEN78_04535 PF00360 Phytochrome region BEN78_04535 PF00512 His Kinase A (phospho-acceptor) domain BEN78_04535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN78_04540 PF00072 Response regulator receiver domain BEN78_04550 PF00390 Malic enzyme, N-terminal domain BEN78_04550 PF03949 Malic enzyme, NAD binding domain BEN78_04550 PF01515 Phosphate acetyl/butaryl transferase BEN78_04555 PF07396 Phosphate-selective porin O and P BEN78_04565 PF00375 Sodium:dicarboxylate symporter family BEN78_04575 PF00672 HAMP domain BEN78_04575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN78_04575 PF00072 Response regulator receiver domain BEN78_04575 PF00512 His Kinase A (phospho-acceptor) domain BEN78_04575 PF01627 Hpt domain BEN78_04585 PF00196 Bacterial regulatory proteins, luxR family BEN78_04585 PF00072 Response regulator receiver domain BEN78_04590 PF00990 Diguanylate cyclase, GGDEF domain BEN78_04590 PF00072 Response regulator receiver domain BEN78_04600 PF03193 RsgA GTPase BEN78_04605 PF00155 Aminotransferase class I and II BEN78_04645 PF01743 Poly A polymerase head domain BEN78_04645 PF12627 Probable RNA and SrmB- binding site of polymerase A BEN78_04645 PF01966 HD domain BEN78_04665 PF00753 Metallo-beta-lactamase superfamily BEN78_04680 PF01636 Phosphotransferase enzyme family BEN78_04690 PF01979 Amidohydrolase family BEN78_04695 PF01380 SIS domain BEN78_04700 PF00356 Bacterial regulatory proteins, lacI family BEN78_04705 PF07690 Major Facilitator Superfamily BEN78_04710 PF02685 Glucokinase BEN78_04720 PF02838 Glycosyl hydrolase family 20, domain 2 BEN78_04720 PF07691 PA14 domain BEN78_04720 PF00728 Glycosyl hydrolase family 20, catalytic domain BEN78_04740 PF00990 Diguanylate cyclase, GGDEF domain BEN78_04740 PF00072 Response regulator receiver domain BEN78_04760 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family BEN78_04770 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BEN78_04770 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BEN78_04775 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BEN78_04780 PF00924 Mechanosensitive ion channel BEN78_04785 PF02152 Dihydroneopterin aldolase BEN78_04790 PF00814 Glycoprotease family BEN78_04795 PF01165 Ribosomal protein S21 BEN78_04800 PF09424 Yqey-like protein BEN78_04805 PF01551 Peptidase family M23 BEN78_04810 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BEN78_04810 PF01676 Metalloenzyme superfamily BEN78_04835 PF00579 tRNA synthetases class I (W and Y) BEN78_04840 PF04225 Opacity-associated protein A LysM-like domain BEN78_04840 PF01551 Peptidase family M23 BEN78_04845 PF03702 Anhydro-N-acetylmuramic acid kinase BEN78_04855 PF01040 UbiA prenyltransferase family BEN78_04880 PF00510 Cytochrome c oxidase subunit III BEN78_04885 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 BEN78_04890 PF00115 Cytochrome C and Quinol oxidase polypeptide I BEN78_04895 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BEN78_04895 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BEN78_04900 PF14850 DNA-binding domain of Proline dehydrogenase BEN78_04900 PF01619 Proline dehydrogenase BEN78_04900 PF00171 Aldehyde dehydrogenase family BEN78_04900 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BEN78_04910 PF00462 Glutaredoxin BEN78_04915 PF00990 Diguanylate cyclase, GGDEF domain BEN78_04920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN78_04920 PF00512 His Kinase A (phospho-acceptor) domain BEN78_04930 PF04480 Protein of unknown function (DUF559) BEN78_04935 PF01040 UbiA prenyltransferase family BEN78_04940 PF02706 Chain length determinant protein BEN78_04940 PF13807 G-rich domain on putative tyrosine kinase BEN78_04940 PF13614 AAA domain BEN78_04945 PF01451 Low molecular weight phosphotyrosine protein phosphatase BEN78_04955 PF10531 SLBB domain BEN78_04955 PF02563 Polysaccharide biosynthesis/export protein BEN78_04955 PF18412 Outer-membrane lipoprotein Wza C-terminal domain BEN78_04970 PF06082 Exopolysaccharide biosynthesis protein YbjH BEN78_04975 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BEN78_04975 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BEN78_04975 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BEN78_04985 PF00132 Bacterial transferase hexapeptide (six repeats) BEN78_04990 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BEN78_05010 PF00534 Glycosyl transferases group 1 BEN78_05010 PF13439 Glycosyltransferase Family 4 BEN78_05015 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BEN78_05020 PF02719 Polysaccharide biosynthesis protein BEN78_05025 PF02397 Bacterial sugar transferase BEN78_05040 PF00953 Glycosyl transferase family 4 BEN78_05045 PF01380 SIS domain BEN78_05060 PF13180 PDZ domain BEN78_05060 PF03572 Peptidase family S41 BEN78_05095 PF06224 Winged helix DNA-binding domain BEN78_05100 PF01841 Transglutaminase-like superfamily BEN78_05100 PF08379 Bacterial transglutaminase-like N-terminal region BEN78_05105 PF01204 Trehalase BEN78_05115 PF00561 alpha/beta hydrolase fold BEN78_05150 PF12706 Beta-lactamase superfamily domain BEN78_05160 PF15887 Putative zinc-binding metallo-peptidase BEN78_05160 PF10005 zinc-ribbon domain BEN78_05170 PF04349 Periplasmic glucan biosynthesis protein, MdoG BEN78_05195 PF12823 Domain of unknown function (DUF3817) BEN78_05195 PF03176 MMPL family BEN78_05220 PF13419 Haloacid dehalogenase-like hydrolase BEN78_05230 PF11799 impB/mucB/samB family C-terminal domain BEN78_05230 PF00817 impB/mucB/samB family BEN78_05235 PF00583 Acetyltransferase (GNAT) family BEN78_05235 PF13607 Succinyl-CoA ligase like flavodoxin domain BEN78_05235 PF13380 CoA binding domain BEN78_05240 PF03167 Uracil DNA glycosylase superfamily BEN78_05245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN78_05245 PF03459 TOBE domain BEN78_05285 PF00301 Rubredoxin BEN78_05290 PF02581 Thiamine monophosphate synthase BEN78_05295 PF00202 Aminotransferase class-III BEN78_05300 PF00520 Ion transport protein BEN78_05300 PF00027 Cyclic nucleotide-binding domain BEN78_05310 PF00202 Aminotransferase class-III BEN78_05335 PF09335 SNARE associated Golgi protein BEN78_05355 PF00682 HMGL-like BEN78_05355 PF07836 DmpG-like communication domain BEN78_05365 PF01557 Fumarylacetoacetate (FAA) hydrolase family BEN78_05370 PF01361 Tautomerase enzyme BEN78_05375 PF07690 Major Facilitator Superfamily BEN78_05385 PF01614 Bacterial transcriptional regulator BEN78_05385 PF09339 IclR helix-turn-helix domain BEN78_05390 PF01225 Mur ligase family, catalytic domain BEN78_05390 PF02875 Mur ligase family, glutamate ligase domain BEN78_05390 PF08245 Mur ligase middle domain BEN78_05400 PF00365 Phosphofructokinase BEN78_05410 PF06827 Zinc finger found in FPG and IleRS BEN78_05410 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BEN78_05410 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BEN78_05415 PF00265 Thymidine kinase BEN78_05420 PF00580 UvrD/REP helicase N-terminal domain BEN78_05420 PF13361 UvrD-like helicase C-terminal domain BEN78_05425 PF04337 Protein of unknown function, DUF480 BEN78_05430 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) BEN78_05485 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BEN78_05485 PF02874 ATP synthase alpha/beta family, beta-barrel domain BEN78_05485 PF18269 T3SS EscN ATPase C-terminal domain BEN78_05500 PF01514 Secretory protein of YscJ/FliF family BEN78_05520 PF00771 FHIPEP family BEN78_05530 PF00989 PAS fold BEN78_05530 PF00512 His Kinase A (phospho-acceptor) domain BEN78_05530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN78_05535 PF00196 Bacterial regulatory proteins, luxR family BEN78_05535 PF00072 Response regulator receiver domain BEN78_05540 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BEN78_05555 PF01313 Bacterial export proteins, family 3 BEN78_05560 PF01311 Bacterial export proteins, family 1 BEN78_05565 PF01312 FlhB HrpN YscU SpaS Family BEN78_05585 PF01553 Acyltransferase BEN78_05590 PF00069 Protein kinase domain BEN78_05590 PF03793 PASTA domain BEN78_05610 PF00005 ABC transporter BEN78_05610 PF12848 ABC transporter BEN78_05615 PF01171 PP-loop family BEN78_05620 PF04381 Putative exonuclease, RdgC BEN78_05630 PF00561 alpha/beta hydrolase fold BEN78_05635 PF00762 Ferrochelatase BEN78_05645 PF02416 mttA/Hcf106 family BEN78_05650 PF02416 mttA/Hcf106 family BEN78_05655 PF00902 Sec-independent protein translocase protein (TatC) BEN78_05670 PF00958 GMP synthase C terminal domain BEN78_05670 PF00117 Glutamine amidotransferase class-I BEN78_05670 PF02540 NAD synthase BEN78_05680 PF02091 Glycyl-tRNA synthetase alpha subunit BEN78_05685 PF05746 DALR anticodon binding domain BEN78_05685 PF02092 Glycyl-tRNA synthetase beta subunit BEN78_05690 PF01103 Surface antigen BEN78_05690 PF07244 Surface antigen variable number repeat BEN78_05690 PF17243 POTRA domain TamA domain 1 BEN78_05695 PF04357 TamB, inner membrane protein subunit of TAM complex BEN78_05715 PF01814 Hemerythrin HHE cation binding domain BEN78_05720 PF04397 LytTr DNA-binding domain BEN78_05730 PF00593 TonB dependent receptor BEN78_05730 PF07715 TonB-dependent Receptor Plug Domain BEN78_05740 PF01546 Peptidase family M20/M25/M40 BEN78_05740 PF07687 Peptidase dimerisation domain BEN78_05745 PF01925 Sulfite exporter TauE/SafE BEN78_05750 PF02222 ATP-grasp domain BEN78_05750 PF01370 NAD dependent epimerase/dehydratase family BEN78_05755 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BEN78_05775 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BEN78_05790 PF03969 AFG1-like ATPase BEN78_05795 PF00593 TonB dependent receptor BEN78_05795 PF07715 TonB-dependent Receptor Plug Domain BEN78_05805 PF03466 LysR substrate binding domain BEN78_05805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN78_05810 PF03477 ATP cone domain BEN78_05810 PF02867 Ribonucleotide reductase, barrel domain BEN78_05810 PF00317 Ribonucleotide reductase, all-alpha domain BEN78_05815 PF00268 Ribonucleotide reductase, small chain BEN78_05845 PF02742 Iron dependent repressor, metal binding and dimerisation domain BEN78_05845 PF01325 Iron dependent repressor, N-terminal DNA binding domain BEN78_05850 PF00005 ABC transporter BEN78_05850 PF09383 NIL domain BEN78_05855 PF00528 Binding-protein-dependent transport system inner membrane component BEN78_05860 PF03180 NLPA lipoprotein BEN78_05885 PF10017 Histidine-specific methyltransferase, SAM-dependent BEN78_05890 PF03781 Sulfatase-modifying factor enzyme 1 BEN78_05890 PF12867 DinB superfamily BEN78_05895 PF17946 RecC C-terminal domain BEN78_05900 PF12705 PD-(D/E)XK nuclease superfamily BEN78_05900 PF13361 UvrD-like helicase C-terminal domain BEN78_05900 PF00580 UvrD/REP helicase N-terminal domain BEN78_05905 PF13538 UvrD-like helicase C-terminal domain BEN78_05915 PF11127 Protein of unknown function (DUF2892) BEN78_05915 PF00581 Rhodanese-like domain BEN78_05920 PF01022 Bacterial regulatory protein, arsR family BEN78_05925 PF02627 Carboxymuconolactone decarboxylase family BEN78_05930 PF00403 Heavy-metal-associated domain BEN78_05935 PF00376 MerR family regulatory protein BEN78_05935 PF09278 MerR, DNA binding BEN78_05965 PF00072 Response regulator receiver domain BEN78_05965 PF00486 Transcriptional regulatory protein, C terminal BEN78_05970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN78_05970 PF00672 HAMP domain BEN78_05970 PF00512 His Kinase A (phospho-acceptor) domain BEN78_05980 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) BEN78_06030 PF08534 Redoxin BEN78_06035 PF00106 short chain dehydrogenase BEN78_06040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN78_06040 PF03466 LysR substrate binding domain BEN78_06070 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BEN78_06075 PF03880 DbpA RNA binding domain BEN78_06075 PF00270 DEAD/DEAH box helicase BEN78_06075 PF00271 Helicase conserved C-terminal domain BEN78_06085 PF05016 ParE toxin of type II toxin-antitoxin system, parDE BEN78_06090 PF03738 Glutathionylspermidine synthase preATP-grasp BEN78_06125 PF01227 GTP cyclohydrolase I BEN78_06130 PF01925 Sulfite exporter TauE/SafE BEN78_06135 PF00750 tRNA synthetases class I (R) BEN78_06135 PF03485 Arginyl tRNA synthetase N terminal domain BEN78_06135 PF05746 DALR anticodon binding domain BEN78_06145 PF03695 Uncharacterised protein family (UPF0149) BEN78_06145 PF02810 SEC-C motif BEN78_06150 PF00106 short chain dehydrogenase BEN78_06155 PF17944 Arginine decarboxylase C-terminal helical extension BEN78_06155 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BEN78_06155 PF17810 Arginine decarboxylase helical bundle domain BEN78_06165 PF17284 Spermidine synthase tetramerisation domain BEN78_06185 PF00543 Nitrogen regulatory protein P-II BEN78_06190 PF04380 Membrane fusogenic activity BEN78_06195 PF01078 Magnesium chelatase, subunit ChlI BEN78_06195 PF13335 Magnesium chelatase, subunit ChlI C-terminal BEN78_06205 PF00326 Prolyl oligopeptidase family BEN78_06215 PF02735 Ku70/Ku80 beta-barrel domain BEN78_06225 PF01915 Glycosyl hydrolase family 3 C-terminal domain BEN78_06225 PF14310 Fibronectin type III-like domain BEN78_06225 PF00933 Glycosyl hydrolase family 3 N terminal domain BEN78_06235 PF01510 N-acetylmuramoyl-L-alanine amidase BEN78_06250 PF00082 Subtilase family BEN78_06250 PF04151 Bacterial pre-peptidase C-terminal domain BEN78_06255 PF05662 Coiled stalk of trimeric autotransporter adhesin BEN78_06255 PF05658 Head domain of trimeric autotransporter adhesin BEN78_06255 PF03895 YadA-like membrane anchor domain BEN78_06255 PF13018 Extended Signal Peptide of Type V secretion system BEN78_06260 PF00512 His Kinase A (phospho-acceptor) domain BEN78_06260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN78_06265 PF00072 Response regulator receiver domain BEN78_06265 PF00486 Transcriptional regulatory protein, C terminal BEN78_06270 PF00909 Ammonium Transporter Family BEN78_06275 PF00543 Nitrogen regulatory protein P-II BEN78_06285 PF00120 Glutamine synthetase, catalytic domain BEN78_06285 PF03951 Glutamine synthetase, beta-Grasp domain BEN78_06290 PF01037 Lrp/AsnC ligand binding domain BEN78_06295 PF00351 Biopterin-dependent aromatic amino acid hydroxylase BEN78_06300 PF00593 TonB dependent receptor BEN78_06300 PF07715 TonB-dependent Receptor Plug Domain BEN78_06305 PF00107 Zinc-binding dehydrogenase BEN78_06305 PF08240 Alcohol dehydrogenase GroES-like domain BEN78_06310 PF00196 Bacterial regulatory proteins, luxR family BEN78_06310 PF00072 Response regulator receiver domain BEN78_06315 PF07730 Histidine kinase BEN78_06325 PF03055 Retinal pigment epithelial membrane protein BEN78_06335 PF00155 Aminotransferase class I and II BEN78_06340 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BEN78_06350 PF00072 Response regulator receiver domain BEN78_06355 PF07194 P2 response regulator binding domain BEN78_06355 PF01584 CheW-like domain BEN78_06355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN78_06355 PF01627 Hpt domain BEN78_06355 PF02895 Signal transducing histidine kinase, homodimeric domain BEN78_06365 PF04055 Radical SAM superfamily BEN78_06370 PF13396 Phospholipase_D-nuclease N-terminal BEN78_06370 PF13091 PLD-like domain BEN78_06385 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BEN78_06390 PF02472 Biopolymer transport protein ExbD/TolR BEN78_06395 PF02472 Biopolymer transport protein ExbD/TolR BEN78_06400 PF01618 MotA/TolQ/ExbB proton channel family BEN78_06415 PF01435 Peptidase family M48 BEN78_06420 PF01751 Toprim domain BEN78_06420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN78_06420 PF18053 DNA gyrase B subunit insert domain BEN78_06420 PF00204 DNA gyrase B BEN78_06420 PF00986 DNA gyrase B subunit, carboxyl terminus BEN78_06425 PF02463 RecF/RecN/SMC N terminal domain BEN78_06430 PF02767 DNA polymerase III beta subunit, central domain BEN78_06430 PF00712 DNA polymerase III beta subunit, N-terminal domain BEN78_06430 PF02768 DNA polymerase III beta subunit, C-terminal domain BEN78_06440 PF00468 Ribosomal protein L34 BEN78_06445 PF00825 Ribonuclease P BEN78_06450 PF14849 YidC periplasmic domain BEN78_06450 PF02096 60Kd inner membrane protein BEN78_06455 PF12631 MnmE helical domain BEN78_06455 PF10396 GTP-binding protein TrmE N-terminus BEN78_06455 PF01926 50S ribosome-binding GTPase BEN78_06470 PF00005 ABC transporter BEN78_06480 PF06114 IrrE N-terminal-like domain BEN78_06480 PF01381 Helix-turn-helix BEN78_06480 PF09856 Predicted transcriptional regulator (DUF2083) BEN78_06495 PF00970 Oxidoreductase FAD-binding domain BEN78_06495 PF00175 Oxidoreductase NAD-binding domain BEN78_06495 PF00111 2Fe-2S iron-sulfur cluster binding domain BEN78_06500 PF00005 ABC transporter BEN78_06505 PF01061 ABC-2 type transporter BEN78_06510 PF02558 Ketopantoate reductase PanE/ApbA BEN78_06510 PF08546 Ketopantoate reductase PanE/ApbA C terminal BEN78_06515 PF05193 Peptidase M16 inactive domain BEN78_06515 PF00675 Insulinase (Peptidase family M16) BEN78_06520 PF00849 RNA pseudouridylate synthase BEN78_06525 PF00472 RF-1 domain BEN78_06540 PF01432 Peptidase family M3 BEN78_06550 PF08000 Bacterial PH domain BEN78_06575 PF03466 LysR substrate binding domain BEN78_06575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN78_06585 PF12833 Helix-turn-helix domain BEN78_06620 PF00571 CBS domain BEN78_06620 PF03448 MgtE intracellular N domain BEN78_06620 PF01769 Divalent cation transporter BEN78_06645 PF00593 TonB dependent receptor BEN78_06645 PF07715 TonB-dependent Receptor Plug Domain BEN78_06650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN78_06650 PF00183 Hsp90 protein BEN78_06655 PF02321 Outer membrane efflux protein BEN78_06660 PF00106 short chain dehydrogenase BEN78_06665 PF00873 AcrB/AcrD/AcrF family BEN78_06670 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BEN78_06670 PF00529 HlyD membrane-fusion protein of T1SS BEN78_06680 PF03466 LysR substrate binding domain BEN78_06680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN78_06685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN78_06685 PF03466 LysR substrate binding domain BEN78_06690 PF01274 Malate synthase BEN78_06695 PF00463 Isocitrate lyase family BEN78_06710 PF00512 His Kinase A (phospho-acceptor) domain BEN78_06710 PF00989 PAS fold BEN78_06710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN78_06715 PF00158 Sigma-54 interaction domain BEN78_06715 PF00072 Response regulator receiver domain BEN78_06715 PF02954 Bacterial regulatory protein, Fis family BEN78_06725 PF00080 Copper/zinc superoxide dismutase (SODC) BEN78_06725 PF13627 Prokaryotic lipoprotein-attachment site BEN78_06735 PF00108 Thiolase, N-terminal domain BEN78_06735 PF02803 Thiolase, C-terminal domain BEN78_06750 PF02602 Uroporphyrinogen-III synthase HemD BEN78_06760 PF03692 Putative zinc- or iron-chelating domain BEN78_06765 PF00561 alpha/beta hydrolase fold BEN78_06775 PF08446 PAS fold BEN78_06775 PF00512 His Kinase A (phospho-acceptor) domain BEN78_06775 PF00360 Phytochrome region BEN78_06775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN78_06775 PF01590 GAF domain BEN78_06780 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BEN78_06780 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BEN78_06790 PF00675 Insulinase (Peptidase family M16) BEN78_06790 PF05193 Peptidase M16 inactive domain BEN78_06800 PF00588 SpoU rRNA Methylase family BEN78_06820 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BEN78_06820 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BEN78_06825 PF02556 Preprotein translocase subunit SecB BEN78_06830 PF00581 Rhodanese-like domain BEN78_06840 PF00501 AMP-binding enzyme BEN78_06855 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family BEN78_06870 PF03109 ABC1 family BEN78_06875 PF02678 Pirin BEN78_06875 PF05726 Pirin C-terminal cupin domain BEN78_06880 PF01026 TatD related DNase BEN78_06885 PF04231 Endonuclease I BEN78_06890 PF00270 DEAD/DEAH box helicase BEN78_06890 PF04408 Helicase associated domain (HA2) BEN78_06890 PF00271 Helicase conserved C-terminal domain BEN78_06890 PF08482 ATP-dependent helicase C-terminal BEN78_06900 PF01734 Patatin-like phospholipase BEN78_06905 PF01068 ATP dependent DNA ligase domain BEN78_06905 PF14743 DNA ligase OB-like domain BEN78_06910 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BEN78_06910 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BEN78_06910 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BEN78_06910 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BEN78_06915 PF00692 dUTPase BEN78_06925 PF04002 RadC-like JAB domain BEN78_06930 PF02810 SEC-C motif BEN78_06935 PF13406 Transglycosylase SLT domain BEN78_06970 PF00005 ABC transporter BEN78_06975 PF02405 Permease MlaE BEN78_06980 PF02470 MlaD protein BEN78_06995 PF04333 MlaA lipoprotein BEN78_07000 PF00255 Glutathione peroxidase BEN78_07005 PF02646 RmuC family BEN78_07025 PF00248 Aldo/keto reductase family BEN78_07030 PF01810 LysE type translocator BEN78_07035 PF07676 WD40-like Beta Propeller Repeat BEN78_07035 PF00326 Prolyl oligopeptidase family BEN78_07040 PF07859 alpha/beta hydrolase fold BEN78_07050 PF01425 Amidase BEN78_07055 PF00593 TonB dependent receptor BEN78_07055 PF07715 TonB-dependent Receptor Plug Domain BEN78_07060 PF01037 Lrp/AsnC ligand binding domain BEN78_07070 PF17785 PUA-like domain BEN78_07070 PF10672 S-adenosylmethionine-dependent methyltransferase BEN78_07080 PF01323 DSBA-like thioredoxin domain BEN78_07085 PF01323 DSBA-like thioredoxin domain BEN78_07090 PF00034 Cytochrome c BEN78_07095 PF01926 50S ribosome-binding GTPase BEN78_07105 PF00089 Trypsin BEN78_07110 PF04107 Glutamate-cysteine ligase family 2(GCS2) BEN78_07115 PF00311 Phosphoenolpyruvate carboxylase BEN78_07120 PF02583 Metal-sensitive transcriptional repressor BEN78_07125 PF00107 Zinc-binding dehydrogenase BEN78_07125 PF08240 Alcohol dehydrogenase GroES-like domain BEN78_07135 PF00756 Putative esterase BEN78_07150 PF06968 Biotin and Thiamin Synthesis associated domain BEN78_07150 PF04055 Radical SAM superfamily BEN78_07155 PF00155 Aminotransferase class I and II BEN78_07160 PF13536 Putative multidrug resistance efflux transporter BEN78_07165 PF12697 Alpha/beta hydrolase family BEN78_07170 PF13649 Methyltransferase domain BEN78_07180 PF12833 Helix-turn-helix domain BEN78_07180 PF12852 Cupin BEN78_07200 PF00291 Pyridoxal-phosphate dependent enzyme BEN78_07210 PF13932 GidA associated domain BEN78_07210 PF01134 Glucose inhibited division protein A BEN78_07240 PF00528 Binding-protein-dependent transport system inner membrane component BEN78_07245 PF00005 ABC transporter BEN78_07255 PF00072 Response regulator receiver domain BEN78_07255 PF00990 Diguanylate cyclase, GGDEF domain BEN78_07260 PF00849 RNA pseudouridylate synthase BEN78_07280 PF03971 Monomeric isocitrate dehydrogenase BEN78_07295 PF01177 Asp/Glu/Hydantoin racemase BEN78_07305 PF01230 HIT domain BEN78_07320 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term BEN78_07320 PF14489 QueF-like protein BEN78_07330 PF01546 Peptidase family M20/M25/M40 BEN78_07330 PF07687 Peptidase dimerisation domain BEN78_07335 PF07687 Peptidase dimerisation domain BEN78_07335 PF01546 Peptidase family M20/M25/M40 BEN78_07340 PF03328 HpcH/HpaI aldolase/citrate lyase family BEN78_07345 PF00474 Sodium:solute symporter family BEN78_07350 PF03466 LysR substrate binding domain BEN78_07350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN78_07355 PF07715 TonB-dependent Receptor Plug Domain BEN78_07355 PF00593 TonB dependent receptor BEN78_07360 PF00294 pfkB family carbohydrate kinase BEN78_07365 PF03781 Sulfatase-modifying factor enzyme 1 BEN78_07375 PF02515 CoA-transferase family III BEN78_07380 PF00923 Transaldolase/Fructose-6-phosphate aldolase BEN78_07385 PF01569 PAP2 superfamily BEN78_07400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN78_07400 PF03466 LysR substrate binding domain BEN78_07405 PF02525 Flavodoxin-like fold BEN78_07410 PF01717 Cobalamin-independent synthase, Catalytic domain BEN78_07410 PF08267 Cobalamin-independent synthase, N-terminal domain BEN78_07415 PF04773 FecR protein BEN78_07415 PF16220 Domain of unknown function (DUF4880) BEN78_07420 PF04542 Sigma-70 region 2 BEN78_07420 PF08281 Sigma-70, region 4 BEN78_07440 PF00082 Subtilase family BEN78_07440 PF01483 Proprotein convertase P-domain BEN78_07445 PF06114 IrrE N-terminal-like domain BEN78_07445 PF09856 Predicted transcriptional regulator (DUF2083) BEN78_07445 PF01381 Helix-turn-helix BEN78_07450 PF09856 Predicted transcriptional regulator (DUF2083) BEN78_07450 PF06114 IrrE N-terminal-like domain BEN78_07450 PF01381 Helix-turn-helix BEN78_07455 PF00171 Aldehyde dehydrogenase family BEN78_07460 PF02770 Acyl-CoA dehydrogenase, middle domain BEN78_07460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN78_07460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN78_07465 PF00378 Enoyl-CoA hydratase/isomerase BEN78_07470 PF00378 Enoyl-CoA hydratase/isomerase BEN78_07475 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BEN78_07475 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BEN78_07485 PF07676 WD40-like Beta Propeller Repeat BEN78_07485 PF03572 Peptidase family S41 BEN78_07485 PF14685 Tricorn protease PDZ domain BEN78_07485 PF14684 Tricorn protease C1 domain BEN78_07525 PF07015 VirC1 protein BEN78_07540 PF13091 PLD-like domain BEN78_07545 PF03061 Thioesterase superfamily BEN78_07565 PF01161 Phosphatidylethanolamine-binding protein BEN78_07575 PF02673 Bacitracin resistance protein BacA BEN78_07585 PF00156 Phosphoribosyl transferase domain BEN78_07590 PF00034 Cytochrome c BEN78_07590 PF03150 Di-haem cytochrome c peroxidase BEN78_07595 PF03372 Endonuclease/Exonuclease/phosphatase family BEN78_07600 PF07690 Major Facilitator Superfamily BEN78_07615 PF01807 CHC2 zinc finger BEN78_07615 PF10410 DnaB-helicase binding domain of primase BEN78_07615 PF08278 DNA primase DnaG DnaB-binding BEN78_07615 PF08275 DNA primase catalytic core, N-terminal domain BEN78_07630 PF03631 Virulence factor BrkB BEN78_07635 PF13307 Helicase C-terminal domain BEN78_07635 PF06733 DEAD_2 BEN78_07660 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BEN78_07670 PF00512 His Kinase A (phospho-acceptor) domain BEN78_07670 PF00072 Response regulator receiver domain BEN78_07670 PF13188 PAS domain BEN78_07670 PF08448 PAS fold BEN78_07670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN78_07685 PF03358 NADPH-dependent FMN reductase BEN78_07685 PF01566 Natural resistance-associated macrophage protein BEN78_07690 PF07690 Major Facilitator Superfamily BEN78_07720 PF00248 Aldo/keto reductase family BEN78_07745 PF08448 PAS fold BEN78_07745 PF05231 MASE1 BEN78_07745 PF08447 PAS fold BEN78_07745 PF00990 Diguanylate cyclase, GGDEF domain BEN78_07745 PF00563 EAL domain BEN78_07745 PF13426 PAS domain BEN78_07760 PF00115 Cytochrome C and Quinol oxidase polypeptide I BEN78_07775 PF03167 Uracil DNA glycosylase superfamily BEN78_07785 PF00155 Aminotransferase class I and II BEN78_07785 PF00392 Bacterial regulatory proteins, gntR family BEN78_07810 PF01432 Peptidase family M3 BEN78_07815 PF00999 Sodium/hydrogen exchanger family BEN78_07820 PF03692 Putative zinc- or iron-chelating domain BEN78_07830 PF08501 Shikimate dehydrogenase substrate binding domain BEN78_07830 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BEN78_07830 PF01488 Shikimate / quinate 5-dehydrogenase BEN78_07835 PF13860 FlgD Ig-like domain BEN78_07835 PF05922 Peptidase inhibitor I9 BEN78_07835 PF02225 PA domain BEN78_07835 PF00082 Subtilase family BEN78_07840 PF00490 Delta-aminolevulinic acid dehydratase BEN78_07850 PF04820 Tryptophan halogenase BEN78_07870 PF07977 FabA-like domain BEN78_07910 PF01494 FAD binding domain BEN78_07910 PF07976 Phenol hydroxylase, C-terminal dimerisation domain BEN78_07915 PF00535 Glycosyl transferase family 2 BEN78_07925 PF02801 Beta-ketoacyl synthase, C-terminal domain BEN78_07925 PF00109 Beta-ketoacyl synthase, N-terminal domain BEN78_07945 PF00326 Prolyl oligopeptidase family BEN78_07945 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region BEN78_07965 PF01915 Glycosyl hydrolase family 3 C-terminal domain BEN78_07965 PF14310 Fibronectin type III-like domain BEN78_07965 PF00933 Glycosyl hydrolase family 3 N terminal domain BEN78_07970 PF00356 Bacterial regulatory proteins, lacI family BEN78_07990 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN78_07995 PF07715 TonB-dependent Receptor Plug Domain BEN78_07995 PF00593 TonB dependent receptor BEN78_08005 PF00294 pfkB family carbohydrate kinase BEN78_08010 PF07690 Major Facilitator Superfamily BEN78_08020 PF07971 Glycosyl hydrolase family 92 BEN78_08020 PF17678 Glycosyl hydrolase family 92 N-terminal domain BEN78_08025 PF03350 Uncharacterized protein family, UPF0114 BEN78_08030 PF00580 UvrD/REP helicase N-terminal domain BEN78_08030 PF13361 UvrD-like helicase C-terminal domain BEN78_08035 PF00582 Universal stress protein family BEN78_08045 PF10459 Peptidase S46 BEN78_08050 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BEN78_08050 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BEN78_08070 PF01612 3'-5' exonuclease BEN78_08070 PF00476 DNA polymerase family A BEN78_08070 PF01367 5'-3' exonuclease, C-terminal SAM fold BEN78_08070 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BEN78_08075 PF00849 RNA pseudouridylate synthase BEN78_08080 PF01218 Coproporphyrinogen III oxidase BEN78_08090 PF07676 WD40-like Beta Propeller Repeat BEN78_08090 PF00326 Prolyl oligopeptidase family BEN78_08095 PF01654 Cytochrome bd terminal oxidase subunit I BEN78_08100 PF02322 Cytochrome bd terminal oxidase subunit II BEN78_08105 PF05166 YcgL domain BEN78_08120 PF09722 Protein of unknown function (DUF2384) BEN78_08140 PF13396 Phospholipase_D-nuclease N-terminal BEN78_08140 PF13091 PLD-like domain BEN78_08145 PF00471 Ribosomal protein L33 BEN78_08150 PF00830 Ribosomal L28 family BEN78_08160 PF00691 OmpA family BEN78_08160 PF13677 Membrane MotB of proton-channel complex MotA/MotB BEN78_08180 PF00816 H-NS histone family BEN78_08190 PF03814 Potassium-transporting ATPase A subunit BEN78_08200 PF02669 K+-transporting ATPase, c chain BEN78_08205 PF02702 Osmosensitive K+ channel His kinase sensor domain BEN78_08205 PF13493 Domain of unknown function (DUF4118) BEN78_08205 PF13492 GAF domain BEN78_08205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN78_08205 PF00512 His Kinase A (phospho-acceptor) domain BEN78_08210 PF00486 Transcriptional regulatory protein, C terminal BEN78_08210 PF00072 Response regulator receiver domain BEN78_08215 PF00107 Zinc-binding dehydrogenase BEN78_08215 PF08659 KR domain BEN78_08215 PF16197 Ketoacyl-synthetase C-terminal extension BEN78_08215 PF00550 Phosphopantetheine attachment site BEN78_08215 PF14765 Polyketide synthase dehydratase BEN78_08215 PF02801 Beta-ketoacyl synthase, C-terminal domain BEN78_08215 PF00109 Beta-ketoacyl synthase, N-terminal domain BEN78_08215 PF00698 Acyl transferase domain BEN78_08215 PF08240 Alcohol dehydrogenase GroES-like domain BEN78_08225 PF00196 Bacterial regulatory proteins, luxR family BEN78_08225 PF00072 Response regulator receiver domain BEN78_08270 PF07690 Major Facilitator Superfamily BEN78_08275 PF10755 Protein of unknown function (DUF2585) BEN78_08280 PF04116 Fatty acid hydroxylase superfamily BEN78_08300 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BEN78_08305 PF01070 FMN-dependent dehydrogenase BEN78_08320 PF00881 Nitroreductase family BEN78_08325 PF04264 YceI-like domain BEN78_08330 PF17954 Quercetinase C-terminal cupin domain BEN78_08330 PF02678 Pirin BEN78_08340 PF00534 Glycosyl transferases group 1 BEN78_08340 PF13439 Glycosyltransferase Family 4 BEN78_08350 PF03279 Bacterial lipid A biosynthesis acyltransferase BEN78_08355 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BEN78_08360 PF02321 Outer membrane efflux protein BEN78_08370 PF17754 MftR C-terminal domain BEN78_08370 PF00440 Bacterial regulatory proteins, tetR family BEN78_08380 PF00873 AcrB/AcrD/AcrF family BEN78_08420 PF13188 PAS domain BEN78_08420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN78_08420 PF00072 Response regulator receiver domain BEN78_08420 PF00512 His Kinase A (phospho-acceptor) domain BEN78_08420 PF08448 PAS fold BEN78_08430 PF07715 TonB-dependent Receptor Plug Domain BEN78_08430 PF00593 TonB dependent receptor BEN78_08460 PF00920 Dehydratase family BEN78_08465 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BEN78_08465 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BEN78_08470 PF00180 Isocitrate/isopropylmalate dehydrogenase BEN78_08475 PF00694 Aconitase C-terminal domain BEN78_08480 PF00330 Aconitase family (aconitate hydratase) BEN78_08485 PF08502 LeuA allosteric (dimerisation) domain BEN78_08485 PF00682 HMGL-like BEN78_08495 PF01063 Amino-transferase class IV BEN78_08505 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BEN78_08505 PF00205 Thiamine pyrophosphate enzyme, central domain BEN78_08505 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BEN78_08510 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BEN78_08510 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BEN78_08520 PF04972 BON domain BEN78_08525 PF00291 Pyridoxal-phosphate dependent enzyme BEN78_08525 PF14821 Threonine synthase N terminus BEN78_08530 PF08544 GHMP kinases C terminal BEN78_08530 PF00288 GHMP kinases N terminal domain BEN78_08535 PF03447 Homoserine dehydrogenase, NAD binding domain BEN78_08535 PF00696 Amino acid kinase family BEN78_08535 PF13840 ACT domain BEN78_08535 PF00742 Homoserine dehydrogenase BEN78_08535 PF01842 ACT domain BEN78_08540 PF01964 Radical SAM ThiC family BEN78_08540 PF13667 ThiC-associated domain BEN78_08550 PF07676 WD40-like Beta Propeller Repeat BEN78_08550 PF04052 TolB amino-terminal domain BEN78_08570 PF00719 Inorganic pyrophosphatase BEN78_08585 PF03030 Inorganic H+ pyrophosphatase BEN78_08590 PF00005 ABC transporter BEN78_08605 PF00083 Sugar (and other) transporter BEN78_08615 PF13193 AMP-binding enzyme C-terminal domain BEN78_08615 PF16177 Acetyl-coenzyme A synthetase N-terminus BEN78_08615 PF00501 AMP-binding enzyme BEN78_08620 PF00072 Response regulator receiver domain BEN78_08620 PF00196 Bacterial regulatory proteins, luxR family BEN78_08625 PF01979 Amidohydrolase family BEN78_08630 PF01979 Amidohydrolase family BEN78_08640 PF02796 Helix-turn-helix domain of resolvase BEN78_08640 PF00239 Resolvase, N terminal domain BEN78_08645 PF05658 Head domain of trimeric autotransporter adhesin BEN78_08645 PF03895 YadA-like membrane anchor domain BEN78_08645 PF13018 Extended Signal Peptide of Type V secretion system BEN78_08645 PF05662 Coiled stalk of trimeric autotransporter adhesin BEN78_08655 PF03895 YadA-like membrane anchor domain BEN78_08655 PF05662 Coiled stalk of trimeric autotransporter adhesin BEN78_08655 PF13018 Extended Signal Peptide of Type V secretion system BEN78_08655 PF05658 Head domain of trimeric autotransporter adhesin BEN78_08690 PF12951 Passenger-associated-transport-repeat BEN78_08700 PF12951 Passenger-associated-transport-repeat BEN78_08700 PF12951 Passenger-associated-transport-repeat BEN78_08705 PF00230 Major intrinsic protein BEN78_08710 PF07497 Rho termination factor, RNA-binding domain BEN78_08710 PF07498 Rho termination factor, N-terminal domain BEN78_08710 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BEN78_08715 PF00085 Thioredoxin BEN78_08725 PF00005 ABC transporter BEN78_08730 PF18075 FtsX extracellular domain BEN78_08735 PF03167 Uracil DNA glycosylase superfamily BEN78_08745 PF01242 6-pyruvoyl tetrahydropterin synthase BEN78_08750 PF04304 Protein of unknown function (DUF454) BEN78_08770 PF01678 Diaminopimelate epimerase BEN78_08780 PF02899 Phage integrase, N-terminal SAM-like domain BEN78_08780 PF00589 Phage integrase family BEN78_08795 PF00227 Proteasome subunit BEN78_08800 PF07724 AAA domain (Cdc48 subfamily) BEN78_08800 PF10431 C-terminal, D2-small domain, of ClpB protein BEN78_08800 PF00004 ATPase family associated with various cellular activities (AAA) BEN78_08815 PF13533 Biotin-lipoyl like BEN78_08830 PF03741 Integral membrane protein TerC family BEN78_08830 PF03471 Transporter associated domain BEN78_08835 PF01209 ubiE/COQ5 methyltransferase family BEN78_08840 PF04493 Endonuclease V BEN78_08845 PF01433 Peptidase family M1 domain BEN78_08845 PF11838 ERAP1-like C-terminal domain BEN78_08865 PF01554 MatE BEN78_08870 PF17158 Membrane-associated sensor, integral membrane domain BEN78_08870 PF00990 Diguanylate cyclase, GGDEF domain BEN78_08875 PF03358 NADPH-dependent FMN reductase BEN78_08885 PF00294 pfkB family carbohydrate kinase BEN78_08895 PF04085 rod shape-determining protein MreC BEN78_08905 PF00905 Penicillin binding protein transpeptidase domain BEN78_08905 PF03717 Penicillin-binding Protein dimerisation domain BEN78_08910 PF01098 Cell cycle protein BEN78_08915 PF13406 Transglycosylase SLT domain BEN78_08925 PF07943 Penicillin-binding protein 5, C-terminal domain BEN78_08925 PF00768 D-alanyl-D-alanine carboxypeptidase BEN78_08930 PF04359 Protein of unknown function (DUF493) BEN78_08940 PF03099 Biotin/lipoate A/B protein ligase family BEN78_08945 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BEN78_08945 PF04055 Radical SAM superfamily BEN78_08950 PF00595 PDZ domain BEN78_08950 PF17804 Tail specific protease N-terminal domain BEN78_08950 PF11818 C-terminal domain of tail specific protease (DUF3340) BEN78_08950 PF03572 Peptidase family S41 BEN78_08955 PF00892 EamA-like transporter family BEN78_08960 PF00892 EamA-like transporter family BEN78_08980 PF00005 ABC transporter BEN78_08980 PF12704 MacB-like periplasmic core domain BEN78_08980 PF02687 FtsX-like permease family BEN78_08985 PF00005 ABC transporter BEN78_08990 PF13533 Biotin-lipoyl like BEN78_08995 PF00005 ABC transporter BEN78_09005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN78_09005 PF07730 Histidine kinase BEN78_09010 PF00196 Bacterial regulatory proteins, luxR family BEN78_09010 PF00072 Response regulator receiver domain BEN78_09020 PF00883 Cytosol aminopeptidase family, catalytic domain BEN78_09020 PF02789 Cytosol aminopeptidase family, N-terminal domain BEN78_09050 PF13180 PDZ domain BEN78_09050 PF00595 PDZ domain BEN78_09060 PF00486 Transcriptional regulatory protein, C terminal BEN78_09060 PF00072 Response regulator receiver domain BEN78_09065 PF00563 EAL domain BEN78_09065 PF00990 Diguanylate cyclase, GGDEF domain BEN78_09065 PF03707 Bacterial signalling protein N terminal repeat BEN78_09090 PF02245 Methylpurine-DNA glycosylase (MPG) BEN78_09095 PF14760 Rnk N-terminus BEN78_09095 PF01272 Transcription elongation factor, GreA/GreB, C-term BEN78_09120 PF00156 Phosphoribosyl transferase domain BEN78_09125 PF01464 Transglycosylase SLT domain BEN78_09130 PF07995 Glucose / Sorbosone dehydrogenase BEN78_09160 PF00289 Biotin carboxylase, N-terminal domain BEN78_09160 PF02785 Biotin carboxylase C-terminal domain BEN78_09160 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BEN78_09165 PF00364 Biotin-requiring enzyme BEN78_09175 PF01220 Dehydroquinase class II BEN78_09180 PF00578 AhpC/TSA family BEN78_09185 PF11412 Disulphide bond corrector protein DsbC BEN78_09185 PF02683 Cytochrome C biogenesis protein transmembrane region BEN78_09190 PF03091 CutA1 divalent ion tolerance protein BEN78_09200 PF00166 Chaperonin 10 Kd subunit BEN78_09205 PF00118 TCP-1/cpn60 chaperonin family BEN78_09215 PF00793 DAHP synthetase I family BEN78_09225 PF01266 FAD dependent oxidoreductase BEN78_09225 PF00355 Rieske [2Fe-2S] domain BEN78_09230 PF01541 GIY-YIG catalytic domain BEN78_09235 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BEN78_09235 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BEN78_09240 PF04101 Glycosyltransferase family 28 C-terminal domain BEN78_09240 PF03033 Glycosyltransferase family 28 N-terminal domain BEN78_09245 PF08335 GlnD PII-uridylyltransferase BEN78_09245 PF03710 Glutamate-ammonia ligase adenylyltransferase BEN78_09250 PF04545 Sigma-70, region 4 BEN78_09250 PF04542 Sigma-70 region 2 BEN78_09255 PF02535 ZIP Zinc transporter BEN78_09265 PF08264 Anticodon-binding domain of tRNA BEN78_09265 PF00133 tRNA synthetases class I (I, L, M and V) BEN78_09265 PF10458 Valyl tRNA synthetase tRNA binding arm BEN78_09275 PF00883 Cytosol aminopeptidase family, catalytic domain BEN78_09275 PF02789 Cytosol aminopeptidase family, N-terminal domain BEN78_09295 PF02899 Phage integrase, N-terminal SAM-like domain BEN78_09295 PF00589 Phage integrase family BEN78_09305 PF02769 AIR synthase related protein, C-terminal domain BEN78_09305 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal BEN78_09305 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BEN78_09320 PF00082 Subtilase family BEN78_09320 PF04151 Bacterial pre-peptidase C-terminal domain BEN78_09335 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BEN78_09335 PF00437 Type II/IV secretion system protein BEN78_09345 PF00482 Type II secretion system (T2SS), protein F BEN78_09365 PF08334 Type II secretion system (T2SS), protein G BEN78_09370 PF12019 Type II transport protein GspH BEN78_09375 PF07963 Prokaryotic N-terminal methylation motif BEN78_09385 PF03934 Type II secretion system (T2SS), protein K BEN78_09390 PF05137 Fimbrial assembly protein (PilN) BEN78_09395 PF10741 Type II secretion system (T2SS), protein M subtype b BEN78_09405 PF00263 Bacterial type II and III secretion system protein BEN78_09405 PF03958 Bacterial type II/III secretion system short domain BEN78_09420 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BEN78_09420 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BEN78_09430 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BEN78_09435 PF00557 Metallopeptidase family M24 BEN78_09445 PF12848 ABC transporter BEN78_09445 PF00005 ABC transporter BEN78_09450 PF00464 Serine hydroxymethyltransferase BEN78_09455 PF03477 ATP cone domain BEN78_09460 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BEN78_09460 PF01872 RibD C-terminal domain BEN78_09465 PF00677 Lumazine binding domain BEN78_09470 PF00925 GTP cyclohydrolase II BEN78_09470 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BEN78_09475 PF00885 6,7-dimethyl-8-ribityllumazine synthase BEN78_09480 PF01029 NusB family BEN78_09485 PF02769 AIR synthase related protein, C-terminal domain BEN78_09485 PF00586 AIR synthase related protein, N-terminal domain BEN78_09495 PF02021 Uncharacterised protein family UPF0102 BEN78_09510 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BEN78_09525 PF02381 MraZ protein, putative antitoxin-like BEN78_09530 PF01795 MraW methylase family BEN78_09535 PF04999 Cell division protein FtsL BEN78_09540 PF03717 Penicillin-binding Protein dimerisation domain BEN78_09540 PF00905 Penicillin binding protein transpeptidase domain BEN78_09545 PF01225 Mur ligase family, catalytic domain BEN78_09545 PF02875 Mur ligase family, glutamate ligase domain BEN78_09545 PF08245 Mur ligase middle domain BEN78_09550 PF08245 Mur ligase middle domain BEN78_09550 PF01225 Mur ligase family, catalytic domain BEN78_09550 PF02875 Mur ligase family, glutamate ligase domain BEN78_09555 PF00953 Glycosyl transferase family 4 BEN78_09560 PF01098 Cell cycle protein BEN78_09565 PF08245 Mur ligase middle domain BEN78_09565 PF02875 Mur ligase family, glutamate ligase domain BEN78_09565 PF01225 Mur ligase family, catalytic domain BEN78_09570 PF07478 D-ala D-ala ligase C-terminus BEN78_09570 PF01820 D-ala D-ala ligase N-terminus BEN78_09575 PF03799 Cell division protein FtsQ BEN78_09575 PF08478 POTRA domain, FtsQ-type BEN78_09580 PF02491 SHS2 domain inserted in FTSA BEN78_09585 PF12327 FtsZ family, C-terminal domain BEN78_09585 PF00091 Tubulin/FtsZ family, GTPase domain BEN78_09590 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BEN78_09600 PF01476 LysM domain BEN78_09600 PF08525 Opacity-associated protein A N-terminal motif BEN78_09600 PF01551 Peptidase family M23 BEN78_09605 PF07517 SecA DEAD-like domain BEN78_09605 PF01043 SecA preprotein cross-linking domain BEN78_09605 PF02810 SEC-C motif BEN78_09605 PF07516 SecA Wing and Scaffold domain BEN78_09610 PF00293 NUDIX domain BEN78_09615 PF01121 Dephospho-CoA kinase BEN78_09620 PF01478 Type IV leader peptidase family BEN78_09620 PF06750 Bacterial Peptidase A24 N-terminal domain BEN78_09625 PF00482 Type II secretion system (T2SS), protein F BEN78_09630 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BEN78_09630 PF00437 Type II/IV secretion system protein BEN78_09640 PF02796 Helix-turn-helix domain of resolvase BEN78_09640 PF00239 Resolvase, N terminal domain BEN78_09645 PF13018 Extended Signal Peptide of Type V secretion system BEN78_09645 PF03895 YadA-like membrane anchor domain BEN78_09645 PF05662 Coiled stalk of trimeric autotransporter adhesin BEN78_09645 PF05658 Head domain of trimeric autotransporter adhesin BEN78_09675 PF12951 Passenger-associated-transport-repeat BEN78_09675 PF12951 Passenger-associated-transport-repeat BEN78_09685 PF12951 Passenger-associated-transport-repeat BEN78_09685 PF12951 Passenger-associated-transport-repeat BEN78_09690 PF12951 Passenger-associated-transport-repeat BEN78_09690 PF12951 Passenger-associated-transport-repeat BEN78_09695 PF00230 Major intrinsic protein BEN78_09710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN78_09710 PF02743 Cache domain BEN78_09710 PF00512 His Kinase A (phospho-acceptor) domain BEN78_09715 PF05230 MASE2 domain BEN78_09715 PF00990 Diguanylate cyclase, GGDEF domain BEN78_09720 PF02954 Bacterial regulatory protein, Fis family BEN78_09720 PF00072 Response regulator receiver domain BEN78_09720 PF00158 Sigma-54 interaction domain BEN78_09725 PF00512 His Kinase A (phospho-acceptor) domain BEN78_09725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN78_09730 PF00549 CoA-ligase BEN78_09730 PF08442 ATP-grasp domain BEN78_09735 PF00549 CoA-ligase BEN78_09735 PF02629 CoA binding domain BEN78_09745 PF01845 CcdB protein BEN78_09750 PF00795 Carbon-nitrogen hydrolase BEN78_09750 PF02540 NAD synthase BEN78_09760 PF00140 Sigma-70 factor, region 1.2 BEN78_09760 PF04542 Sigma-70 region 2 BEN78_09760 PF04539 Sigma-70 region 3 BEN78_09760 PF03979 Sigma-70 factor, region 1.1 BEN78_09760 PF04545 Sigma-70, region 4 BEN78_09760 PF04546 Sigma-70, non-essential region BEN78_09770 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BEN78_09780 PF01812 5-formyltetrahydrofolate cyclo-ligase family BEN78_09800 PF03707 Bacterial signalling protein N terminal repeat BEN78_09800 PF00563 EAL domain BEN78_09800 PF00990 Diguanylate cyclase, GGDEF domain BEN78_09810 PF05195 Aminopeptidase P, N-terminal domain BEN78_09810 PF00557 Metallopeptidase family M24 BEN78_09815 PF00557 Metallopeptidase family M24 BEN78_09820 PF06969 HemN C-terminal domain BEN78_09820 PF04055 Radical SAM superfamily BEN78_09825 PF01725 Ham1 family BEN78_09830 PF03725 3' exoribonuclease family, domain 2 BEN78_09830 PF01138 3' exoribonuclease family, domain 1 BEN78_09835 PF08340 Domain of unknown function (DUF1732) BEN78_09835 PF03755 YicC-like family, N-terminal region BEN78_09840 PF07715 TonB-dependent Receptor Plug Domain BEN78_09840 PF00593 TonB dependent receptor BEN78_09845 PF01425 Amidase BEN78_09850 PF00326 Prolyl oligopeptidase family BEN78_09850 PF07676 WD40-like Beta Propeller Repeat BEN78_09865 PF00625 Guanylate kinase BEN78_09870 PF01192 RNA polymerase Rpb6 BEN78_09875 PF04607 Region found in RelA / SpoT proteins BEN78_09875 PF13291 ACT domain BEN78_09875 PF02824 TGS domain BEN78_09880 PF01042 Endoribonuclease L-PSP BEN78_09885 PF17191 RecG wedge domain BEN78_09885 PF00270 DEAD/DEAH box helicase BEN78_09885 PF00271 Helicase conserved C-terminal domain BEN78_09890 PF00196 Bacterial regulatory proteins, luxR family BEN78_09890 PF00072 Response regulator receiver domain BEN78_09895 PF13018 Extended Signal Peptide of Type V secretion system BEN78_09895 PF05662 Coiled stalk of trimeric autotransporter adhesin BEN78_09895 PF05658 Head domain of trimeric autotransporter adhesin BEN78_09895 PF03895 YadA-like membrane anchor domain BEN78_09900 PF03895 YadA-like membrane anchor domain BEN78_09900 PF05658 Head domain of trimeric autotransporter adhesin BEN78_09900 PF05662 Coiled stalk of trimeric autotransporter adhesin BEN78_09900 PF13018 Extended Signal Peptide of Type V secretion system BEN78_09910 PF01156 Inosine-uridine preferring nucleoside hydrolase BEN78_09915 PF01197 Ribosomal protein L31 BEN78_09920 PF00285 Citrate synthase, C-terminal domain BEN78_09930 PF17092 Penicillin-binding protein OB-like domain BEN78_09930 PF00912 Transglycosylase BEN78_09930 PF00905 Penicillin binding protein transpeptidase domain BEN78_09955 PF00263 Bacterial type II and III secretion system protein BEN78_09955 PF11741 AMIN domain BEN78_09955 PF03958 Bacterial type II/III secretion system short domain BEN78_09955 PF07660 Secretin and TonB N terminus short domain BEN78_09960 PF07726 ATPase family associated with various cellular activities (AAA) BEN78_09960 PF17863 AAA lid domain BEN78_09990 PF00375 Sodium:dicarboxylate symporter family BEN78_09995 PF00210 Ferritin-like domain BEN78_10000 PF00271 Helicase conserved C-terminal domain BEN78_10000 PF00270 DEAD/DEAH box helicase BEN78_10000 PF04408 Helicase associated domain (HA2) BEN78_10000 PF11898 Domain of unknown function (DUF3418) BEN78_10000 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BEN78_10015 PF04607 Region found in RelA / SpoT proteins BEN78_10015 PF02824 TGS domain BEN78_10015 PF13291 ACT domain BEN78_10030 PF00905 Penicillin binding protein transpeptidase domain BEN78_10030 PF14814 Bifunctional transglycosylase second domain BEN78_10030 PF00912 Transglycosylase BEN78_10040 PF04851 Type III restriction enzyme, res subunit BEN78_10040 PF13307 Helicase C-terminal domain BEN78_10045 PF00814 Glycoprotease family BEN78_10055 PF01209 ubiE/COQ5 methyltransferase family BEN78_10065 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BEN78_10065 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BEN78_10070 PF00072 Response regulator receiver domain BEN78_10075 PF00072 Response regulator receiver domain BEN78_10080 PF01584 CheW-like domain BEN78_10085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BEN78_10085 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term BEN78_10090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN78_10090 PF01627 Hpt domain BEN78_10090 PF01584 CheW-like domain BEN78_10090 PF02895 Signal transducing histidine kinase, homodimeric domain BEN78_10090 PF07194 P2 response regulator binding domain BEN78_10110 PF04452 RNA methyltransferase BEN78_10115 PF00202 Aminotransferase class-III BEN78_10120 PF00293 NUDIX domain BEN78_10125 PF00459 Inositol monophosphatase family BEN78_10130 PF03819 MazG nucleotide pyrophosphohydrolase domain BEN78_10135 PF02694 Uncharacterised BCR, YnfA/UPF0060 family BEN78_10145 PF00486 Transcriptional regulatory protein, C terminal BEN78_10145 PF00072 Response regulator receiver domain BEN78_10150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN78_10150 PF08521 Two-component sensor kinase N-terminal BEN78_10150 PF00512 His Kinase A (phospho-acceptor) domain BEN78_10155 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BEN78_10165 PF02687 FtsX-like permease family BEN78_10165 PF00005 ABC transporter BEN78_10165 PF12704 MacB-like periplasmic core domain BEN78_10170 PF12704 MacB-like periplasmic core domain BEN78_10170 PF02687 FtsX-like permease family BEN78_10170 PF00005 ABC transporter BEN78_10185 PF01476 LysM domain BEN78_10185 PF05257 CHAP domain BEN78_10200 PF01219 Prokaryotic diacylglycerol kinase BEN78_10205 PF03741 Integral membrane protein TerC family BEN78_10210 PF01790 Prolipoprotein diacylglyceryl transferase BEN78_10215 PF00303 Thymidylate synthase BEN78_10220 PF00186 Dihydrofolate reductase BEN78_10225 PF06940 Domain of unknown function (DUF1287) BEN78_10235 PF04379 ApaG domain BEN78_10240 PF00398 Ribosomal RNA adenine dimethylase BEN78_10245 PF01588 Putative tRNA binding domain BEN78_10250 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BEN78_10255 PF09312 SurA N-terminal domain BEN78_10255 PF00639 PPIC-type PPIASE domain BEN78_10260 PF03968 OstA-like protein BEN78_10260 PF04453 LPS transport system D BEN78_10265 PF00850 Histone deacetylase domain BEN78_10270 PF01923 Cobalamin adenosyltransferase BEN78_10280 PF01494 FAD binding domain BEN78_10285 PF01494 FAD binding domain BEN78_10295 PF05661 Protein of unknown function (DUF808) BEN78_10305 PF01728 FtsJ-like methyltransferase BEN78_10305 PF18125 RlmM ferredoxin-like domain BEN78_10325 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BEN78_10325 PF00749 tRNA synthetases class I (E and Q), catalytic domain BEN78_10330 PF00990 Diguanylate cyclase, GGDEF domain BEN78_10340 PF01625 Peptide methionine sulfoxide reductase BEN78_10345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN78_10345 PF03466 LysR substrate binding domain BEN78_10350 PF13192 Thioredoxin domain BEN78_10350 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN78_10355 PF10417 C-terminal domain of 1-Cys peroxiredoxin BEN78_10355 PF00578 AhpC/TSA family BEN78_10365 PF05175 Methyltransferase small domain BEN78_10365 PF17827 PrmC N-terminal domain BEN78_10370 PF00561 alpha/beta hydrolase fold BEN78_10375 PF03831 PhnA domain BEN78_10375 PF08274 PhnA Zinc-Ribbon BEN78_10380 PF00293 NUDIX domain BEN78_10385 PF00476 DNA polymerase family A BEN78_10385 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BEN78_10385 PF01367 5'-3' exonuclease, C-terminal SAM fold BEN78_10385 PF01612 3'-5' exonuclease BEN78_10390 PF00881 Nitroreductase family BEN78_10410 PF08281 Sigma-70, region 4 BEN78_10410 PF04542 Sigma-70 region 2 BEN78_10415 PF02233 NAD(P) transhydrogenase beta subunit BEN78_10425 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BEN78_10430 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BEN78_10430 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BEN78_10440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN78_10440 PF03466 LysR substrate binding domain BEN78_10465 PF01883 Iron-sulfur cluster assembly protein BEN78_10470 PF00082 Subtilase family BEN78_10470 PF04151 Bacterial pre-peptidase C-terminal domain BEN78_10475 PF01483 Proprotein convertase P-domain BEN78_10485 PF00710 Asparaginase, N-terminal BEN78_10485 PF17763 Glutaminase/Asparaginase C-terminal domain BEN78_10495 PF03358 NADPH-dependent FMN reductase BEN78_10500 PF03631 Virulence factor BrkB BEN78_10505 PF08534 Redoxin BEN78_10515 PF04011 LemA family BEN78_10520 PF01435 Peptidase family M48 BEN78_10525 PF05199 GMC oxidoreductase BEN78_10525 PF00732 GMC oxidoreductase BEN78_10540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN78_10540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN78_10540 PF09317 Domain of unknown function (DUF1974) BEN78_10540 PF02770 Acyl-CoA dehydrogenase, middle domain BEN78_10545 PF00440 Bacterial regulatory proteins, tetR family BEN78_10560 PF01430 Hsp33 protein BEN78_10565 PF00912 Transglycosylase BEN78_10570 PF00535 Glycosyl transferase family 2 BEN78_10580 PF03006 Haemolysin-III related BEN78_10585 PF00009 Elongation factor Tu GTP binding domain BEN78_10585 PF16658 Class II release factor RF3, C-terminal domain BEN78_10590 PF01551 Peptidase family M23 BEN78_10590 PF01476 LysM domain BEN78_10590 PF08525 Opacity-associated protein A N-terminal motif BEN78_10595 PF00561 alpha/beta hydrolase fold BEN78_10600 PF01053 Cys/Met metabolism PLP-dependent enzyme BEN78_10605 PF00742 Homoserine dehydrogenase BEN78_10605 PF00696 Amino acid kinase family BEN78_10605 PF03447 Homoserine dehydrogenase, NAD binding domain BEN78_10615 PF01850 PIN domain BEN78_10625 PF03315 Serine dehydratase beta chain BEN78_10625 PF03313 Serine dehydratase alpha chain BEN78_10645 PF00512 His Kinase A (phospho-acceptor) domain BEN78_10645 PF00072 Response regulator receiver domain BEN78_10645 PF17149 Periplasmic sensor domain found in signal transduction proteins BEN78_10645 PF00672 HAMP domain BEN78_10645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN78_10645 PF01627 Hpt domain BEN78_10650 PF04679 ATP dependent DNA ligase C terminal region BEN78_10650 PF01068 ATP dependent DNA ligase domain BEN78_10650 PF04675 DNA ligase N terminus BEN78_10655 PF04679 ATP dependent DNA ligase C terminal region BEN78_10655 PF01068 ATP dependent DNA ligase domain BEN78_10655 PF04675 DNA ligase N terminus BEN78_10660 PF00271 Helicase conserved C-terminal domain BEN78_10660 PF00270 DEAD/DEAH box helicase BEN78_10660 PF08494 DEAD/H associated BEN78_10680 PF05496 Holliday junction DNA helicase RuvB P-loop domain BEN78_10680 PF17864 RuvB AAA lid domain BEN78_10680 PF05491 RuvB C-terminal winged helix domain BEN78_10690 PF05816 Toxic anion resistance protein (TelA) BEN78_10695 PF01208 Uroporphyrinogen decarboxylase (URO-D) BEN78_10705 PF01761 3-dehydroquinate synthase BEN78_10710 PF01202 Shikimate kinase BEN78_10720 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BEN78_10720 PF01243 Pyridoxamine 5'-phosphate oxidase BEN78_10725 PF13460 NAD(P)H-binding BEN78_10735 PF03807 NADP oxidoreductase coenzyme F420-dependent BEN78_10735 PF14748 Pyrroline-5-carboxylate reductase dimerisation BEN78_10740 PF00437 Type II/IV secretion system protein BEN78_10745 PF00437 Type II/IV secretion system protein BEN78_10750 PF01435 Peptidase family M48 BEN78_10755 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BEN78_10755 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BEN78_10765 PF00958 GMP synthase C terminal domain BEN78_10765 PF00117 Glutamine amidotransferase class-I BEN78_10765 PF03352 Methyladenine glycosylase BEN78_10765 PF13302 Acetyltransferase (GNAT) domain BEN78_10765 PF13673 Acetyltransferase (GNAT) domain BEN78_10770 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BEN78_10780 PF02622 Uncharacterized ACR, COG1678 BEN78_10785 PF03652 Holliday junction resolvase BEN78_10790 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BEN78_10790 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BEN78_10795 PF00324 Amino acid permease BEN78_10810 PF03448 MgtE intracellular N domain BEN78_10810 PF01769 Divalent cation transporter BEN78_10810 PF00571 CBS domain BEN78_10815 PF05524 PEP-utilising enzyme, N-terminal BEN78_10815 PF00391 PEP-utilising enzyme, mobile domain BEN78_10815 PF02896 PEP-utilising enzyme, TIM barrel domain BEN78_10820 PF00381 PTS HPr component phosphorylation site BEN78_10830 PF03668 P-loop ATPase protein family BEN78_10835 PF02603 HPr Serine kinase N terminus BEN78_10835 PF07475 HPr Serine kinase C-terminal domain BEN78_10840 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BEN78_10845 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BEN78_10855 PF12399 Branched-chain amino acid ATP-binding cassette transporter BEN78_10855 PF00005 ABC transporter BEN78_10875 PF01380 SIS domain BEN78_10875 PF00571 CBS domain BEN78_10880 PF01722 BolA-like protein BEN78_10885 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BEN78_10905 PF00551 Formyl transferase BEN78_10915 PF02769 AIR synthase related protein, C-terminal domain BEN78_10915 PF00586 AIR synthase related protein, N-terminal domain BEN78_10925 PF01594 AI-2E family transporter BEN78_10930 PF00308 Bacterial dnaA protein BEN78_10935 PF00994 Probable molybdopterin binding domain BEN78_10940 PF00472 RF-1 domain BEN78_10940 PF03462 PCRF domain BEN78_10945 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BEN78_10945 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BEN78_10945 PF01488 Shikimate / quinate 5-dehydrogenase BEN78_10955 PF03550 Outer membrane lipoprotein LolB BEN78_10960 PF00288 GHMP kinases N terminal domain BEN78_10960 PF08544 GHMP kinases C terminal BEN78_10970 PF14572 Phosphoribosyl synthetase-associated domain BEN78_10970 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BEN78_10975 PF01386 Ribosomal L25p family BEN78_10975 PF14693 Ribosomal protein TL5, C-terminal domain BEN78_10980 PF01195 Peptidyl-tRNA hydrolase BEN78_10985 PF06071 Protein of unknown function (DUF933) BEN78_10985 PF01926 50S ribosome-binding GTPase BEN78_10990 PF01112 Asparaginase BEN78_11010 PF03143 Elongation factor Tu C-terminal domain BEN78_11010 PF03144 Elongation factor Tu domain 2 BEN78_11010 PF00009 Elongation factor Tu GTP binding domain BEN78_11020 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BEN78_11025 PF02357 Transcription termination factor nusG BEN78_11025 PF00467 KOW motif BEN78_11030 PF03946 Ribosomal protein L11, N-terminal domain BEN78_11030 PF00298 Ribosomal protein L11, RNA binding domain BEN78_11035 PF00687 Ribosomal protein L1p/L10e family BEN78_11040 PF00466 Ribosomal protein L10 BEN78_11045 PF16320 Ribosomal protein L7/L12 dimerisation domain BEN78_11045 PF00542 Ribosomal protein L7/L12 C-terminal domain BEN78_11050 PF04565 RNA polymerase Rpb2, domain 3 BEN78_11050 PF10385 RNA polymerase beta subunit external 1 domain BEN78_11050 PF00562 RNA polymerase Rpb2, domain 6 BEN78_11050 PF04560 RNA polymerase Rpb2, domain 7 BEN78_11050 PF04563 RNA polymerase beta subunit BEN78_11050 PF04561 RNA polymerase Rpb2, domain 2 BEN78_11055 PF04998 RNA polymerase Rpb1, domain 5 BEN78_11055 PF04997 RNA polymerase Rpb1, domain 1 BEN78_11055 PF00623 RNA polymerase Rpb1, domain 2 BEN78_11055 PF05000 RNA polymerase Rpb1, domain 4 BEN78_11055 PF04983 RNA polymerase Rpb1, domain 3 BEN78_11060 PF00164 Ribosomal protein S12/S23 BEN78_11065 PF00177 Ribosomal protein S7p/S5e BEN78_11070 PF00679 Elongation factor G C-terminus BEN78_11070 PF14492 Elongation Factor G, domain II BEN78_11070 PF00009 Elongation factor Tu GTP binding domain BEN78_11070 PF03144 Elongation factor Tu domain 2 BEN78_11070 PF03764 Elongation factor G, domain IV BEN78_11075 PF03143 Elongation factor Tu C-terminal domain BEN78_11075 PF03144 Elongation factor Tu domain 2 BEN78_11075 PF00009 Elongation factor Tu GTP binding domain BEN78_11080 PF00338 Ribosomal protein S10p/S20e BEN78_11085 PF00297 Ribosomal protein L3 BEN78_11090 PF00573 Ribosomal protein L4/L1 family BEN78_11095 PF00276 Ribosomal protein L23 BEN78_11100 PF00181 Ribosomal Proteins L2, RNA binding domain BEN78_11100 PF03947 Ribosomal Proteins L2, C-terminal domain BEN78_11105 PF00203 Ribosomal protein S19 BEN78_11110 PF00237 Ribosomal protein L22p/L17e BEN78_11115 PF00189 Ribosomal protein S3, C-terminal domain BEN78_11115 PF07650 KH domain BEN78_11120 PF00252 Ribosomal protein L16p/L10e BEN78_11125 PF00831 Ribosomal L29 protein BEN78_11130 PF00366 Ribosomal protein S17 BEN78_11135 PF00238 Ribosomal protein L14p/L23e BEN78_11140 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BEN78_11140 PF00467 KOW motif BEN78_11145 PF00673 ribosomal L5P family C-terminus BEN78_11145 PF00281 Ribosomal protein L5 BEN78_11150 PF00253 Ribosomal protein S14p/S29e BEN78_11155 PF00410 Ribosomal protein S8 BEN78_11160 PF00347 Ribosomal protein L6 BEN78_11165 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BEN78_11170 PF03719 Ribosomal protein S5, C-terminal domain BEN78_11170 PF00333 Ribosomal protein S5, N-terminal domain BEN78_11175 PF00327 Ribosomal protein L30p/L7e BEN78_11180 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BEN78_11190 PF00416 Ribosomal protein S13/S18 BEN78_11195 PF00411 Ribosomal protein S11 BEN78_11200 PF00163 Ribosomal protein S4/S9 N-terminal domain BEN78_11200 PF01479 S4 domain BEN78_11205 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BEN78_11205 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BEN78_11205 PF01000 RNA polymerase Rpb3/RpoA insert domain BEN78_11210 PF01196 Ribosomal protein L17 BEN78_11215 PF02600 Disulfide bond formation protein DsbB BEN78_11220 PF01474 Class-II DAHP synthetase family BEN78_11240 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BEN78_11255 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BEN78_11255 PF00056 lactate/malate dehydrogenase, NAD binding domain BEN78_11260 PF16177 Acetyl-coenzyme A synthetase N-terminus BEN78_11260 PF00501 AMP-binding enzyme BEN78_11260 PF13193 AMP-binding enzyme C-terminal domain BEN78_11265 PF00285 Citrate synthase, C-terminal domain BEN78_11275 PF00285 Citrate synthase, C-terminal domain BEN78_11280 PF00694 Aconitase C-terminal domain BEN78_11280 PF00330 Aconitase family (aconitate hydratase) BEN78_11290 PF04303 PrpF protein BEN78_11295 PF00043 Glutathione S-transferase, C-terminal domain BEN78_11295 PF02798 Glutathione S-transferase, N-terminal domain BEN78_11305 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BEN78_11305 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN78_11310 PF00107 Zinc-binding dehydrogenase BEN78_11310 PF08240 Alcohol dehydrogenase GroES-like domain BEN78_11315 PF00248 Aldo/keto reductase family BEN78_11325 PF03466 LysR substrate binding domain BEN78_11325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN78_11330 PF00223 Photosystem I psaA/psaB protein BEN78_11330 PF00691 OmpA family BEN78_11340 PF00849 RNA pseudouridylate synthase BEN78_11340 PF01479 S4 domain BEN78_11345 PF00155 Aminotransferase class I and II BEN78_11355 PF00107 Zinc-binding dehydrogenase BEN78_11355 PF08240 Alcohol dehydrogenase GroES-like domain BEN78_11360 PF10459 Peptidase S46 BEN78_11370 PF00300 Histidine phosphatase superfamily (branch 1) BEN78_11375 PF08245 Mur ligase middle domain BEN78_11375 PF02875 Mur ligase family, glutamate ligase domain BEN78_11385 PF00156 Phosphoribosyl transferase domain BEN78_11390 PF04305 Protein of unknown function (DUF455) BEN78_11410 PF00149 Calcineurin-like phosphoesterase BEN78_11415 PF00749 tRNA synthetases class I (E and Q), catalytic domain BEN78_11420 PF01475 Ferric uptake regulator family BEN78_11425 PF07715 TonB-dependent Receptor Plug Domain BEN78_11425 PF00593 TonB dependent receptor BEN78_11445 PF01979 Amidohydrolase family BEN78_11455 PF01494 FAD binding domain BEN78_11460 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BEN78_11460 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BEN78_11465 PF02805 Metal binding domain of Ada BEN78_11465 PF12833 Helix-turn-helix domain BEN78_11465 PF00730 HhH-GPD superfamily base excision DNA repair protein BEN78_11465 PF06029 AlkA N-terminal domain BEN78_11485 PF17391 Urocanase N-terminal domain BEN78_11485 PF17392 Urocanase C-terminal domain BEN78_11485 PF01175 Urocanase Rossmann-like domain BEN78_11495 PF01641 SelR domain BEN78_11500 PF00083 Sugar (and other) transporter BEN78_11510 PF02308 MgtC family BEN78_11540 PF01965 DJ-1/PfpI family BEN78_11545 PF00271 Helicase conserved C-terminal domain BEN78_11545 PF00270 DEAD/DEAH box helicase BEN78_11545 PF09369 Domain of unknown function (DUF1998) BEN78_11555 PF13520 Amino acid permease BEN78_11565 PF00561 alpha/beta hydrolase fold BEN78_11575 PF00005 ABC transporter BEN78_11575 PF00664 ABC transporter transmembrane region BEN78_11580 PF08240 Alcohol dehydrogenase GroES-like domain BEN78_11580 PF00107 Zinc-binding dehydrogenase BEN78_11585 PF00376 MerR family regulatory protein BEN78_11585 PF09278 MerR, DNA binding BEN78_11605 PF02272 DHHA1 domain BEN78_11605 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BEN78_11605 PF01411 tRNA synthetases class II (A) BEN78_11615 PF07694 5TMR of 5TMR-LYT BEN78_11615 PF00990 Diguanylate cyclase, GGDEF domain BEN78_11625 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BEN78_11625 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BEN78_11630 PF00462 Glutaredoxin BEN78_11640 PF01914 MarC family integral membrane protein BEN78_11645 PF00593 TonB dependent receptor BEN78_11650 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases BEN78_11650 PF11892 Domain of unknown function (DUF3412) BEN78_11650 PF03641 Possible lysine decarboxylase BEN78_11655 PF07694 5TMR of 5TMR-LYT BEN78_11655 PF06580 Histidine kinase BEN78_11700 PF02151 UvrB/uvrC motif BEN78_11700 PF12344 Ultra-violet resistance protein B BEN78_11700 PF17757 UvrB interaction domain BEN78_11700 PF04851 Type III restriction enzyme, res subunit BEN78_11700 PF00271 Helicase conserved C-terminal domain BEN78_11730 PF07715 TonB-dependent Receptor Plug Domain BEN78_11730 PF00593 TonB dependent receptor BEN78_11760 PF00719 Inorganic pyrophosphatase BEN78_11765 PF01979 Amidohydrolase family BEN78_11770 PF00202 Aminotransferase class-III BEN78_11775 PF01037 Lrp/AsnC ligand binding domain BEN78_11780 PF02547 Queuosine biosynthesis protein BEN78_11790 PF01702 Queuine tRNA-ribosyltransferase BEN78_11795 PF02699 Preprotein translocase subunit BEN78_11800 PF07549 SecD/SecF GG Motif BEN78_11800 PF13721 SecD export protein N-terminal TM region BEN78_11800 PF02355 Protein export membrane protein BEN78_11805 PF07549 SecD/SecF GG Motif BEN78_11805 PF02355 Protein export membrane protein BEN78_11810 PF00459 Inositol monophosphatase family BEN78_11815 PF00588 SpoU rRNA Methylase family BEN78_11825 PF00571 CBS domain BEN78_11825 PF01595 Cyclin M transmembrane N-terminal domain BEN78_11825 PF03471 Transporter associated domain BEN78_11835 PF01384 Phosphate transporter family BEN78_11855 PF05649 Peptidase family M13 BEN78_11855 PF01431 Peptidase family M13 BEN78_11860 PF00999 Sodium/hydrogen exchanger family BEN78_11860 PF02254 TrkA-N domain BEN78_11870 PF00270 DEAD/DEAH box helicase BEN78_11870 PF00271 Helicase conserved C-terminal domain BEN78_11905 PF00486 Transcriptional regulatory protein, C terminal BEN78_11905 PF00072 Response regulator receiver domain BEN78_11910 PF13188 PAS domain BEN78_11910 PF00512 His Kinase A (phospho-acceptor) domain BEN78_11910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN78_11910 PF00072 Response regulator receiver domain BEN78_11910 PF08448 PAS fold BEN78_11915 PF05658 Head domain of trimeric autotransporter adhesin BEN78_11915 PF03895 YadA-like membrane anchor domain BEN78_11915 PF13018 Extended Signal Peptide of Type V secretion system BEN78_11915 PF05662 Coiled stalk of trimeric autotransporter adhesin BEN78_11920 PF04151 Bacterial pre-peptidase C-terminal domain BEN78_11920 PF00082 Subtilase family BEN78_11925 PF00375 Sodium:dicarboxylate symporter family BEN78_11930 PF00675 Insulinase (Peptidase family M16) BEN78_11930 PF05193 Peptidase M16 inactive domain BEN78_11950 PF00069 Protein kinase domain BEN78_11950 PF03793 PASTA domain BEN78_11960 PF00085 Thioredoxin BEN78_11975 PF00072 Response regulator receiver domain BEN78_11975 PF00990 Diguanylate cyclase, GGDEF domain BEN78_11980 PF13603 Leucyl-tRNA synthetase, Domain 2 BEN78_11980 PF08264 Anticodon-binding domain of tRNA BEN78_11980 PF00133 tRNA synthetases class I (I, L, M and V) BEN78_11995 PF01467 Cytidylyltransferase-like BEN78_12005 PF02590 Predicted SPOUT methyltransferase BEN78_12010 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BEN78_12010 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BEN78_12010 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BEN78_12020 PF08543 Phosphomethylpyrimidine kinase BEN78_12020 PF02581 Thiamine monophosphate synthase BEN78_12035 PF02562 PhoH-like protein BEN78_12035 PF13638 PIN domain BEN78_12040 PF00578 AhpC/TSA family BEN78_12050 PF00701 Dihydrodipicolinate synthetase family BEN78_12060 PF00037 4Fe-4S binding domain BEN78_12060 PF11953 Domain of unknown function (DUF3470) BEN78_12070 PF12626 Polymerase A arginine-rich C-terminus BEN78_12070 PF01743 Poly A polymerase head domain BEN78_12070 PF12627 Probable RNA and SrmB- binding site of polymerase A BEN78_12075 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BEN78_12080 PF02548 Ketopantoate hydroxymethyltransferase BEN78_12085 PF02569 Pantoate-beta-alanine ligase BEN78_12090 PF02261 Aspartate decarboxylase BEN78_12095 PF00342 Phosphoglucose isomerase BEN78_12100 PF08331 Domain of unknown function (DUF1730) BEN78_12105 PF03853 YjeF-related protein N-terminus BEN78_12105 PF01256 Carbohydrate kinase BEN78_12110 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BEN78_12115 PF01520 N-acetylmuramoyl-L-alanine amidase BEN78_12115 PF11741 AMIN domain BEN78_12120 PF01119 DNA mismatch repair protein, C-terminal domain BEN78_12120 PF08676 MutL C terminal dimerisation domain BEN78_12135 PF00375 Sodium:dicarboxylate symporter family BEN78_12140 PF13537 Glutamine amidotransferase domain BEN78_12140 PF00733 Asparagine synthase BEN78_12150 PF07055 Enoyl reductase FAD binding domain BEN78_12150 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase BEN78_12150 PF12241 Trans-2-enoyl-CoA reductase catalytic region BEN78_12170 PF01804 Penicillin amidase BEN78_12180 PF00210 Ferritin-like domain BEN78_12185 PF05724 Thiopurine S-methyltransferase (TPMT) BEN78_12190 PF00521 DNA gyrase/topoisomerase IV, subunit A BEN78_12190 PF03989 DNA gyrase C-terminal domain, beta-propeller BEN78_12195 PF13545 Crp-like helix-turn-helix domain BEN78_12195 PF00027 Cyclic nucleotide-binding domain BEN78_12200 PF01739 CheR methyltransferase, SAM binding domain BEN78_12200 PF03705 CheR methyltransferase, all-alpha domain BEN78_12200 PF08448 PAS fold BEN78_12200 PF01339 CheB methylesterase BEN78_12235 PF08032 RNA 2'-O ribose methyltransferase substrate binding BEN78_12235 PF00588 SpoU rRNA Methylase family BEN78_12245 PF00893 Small Multidrug Resistance protein BEN78_12250 PF00149 Calcineurin-like phosphoesterase BEN78_12255 PF00929 Exonuclease BEN78_12260 PF01895 PhoU domain BEN78_12265 PF00005 ABC transporter BEN78_12270 PF00528 Binding-protein-dependent transport system inner membrane component BEN78_12275 PF00528 Binding-protein-dependent transport system inner membrane component BEN78_12280 PF12849 PBP superfamily domain BEN78_12285 PF12849 PBP superfamily domain BEN78_12300 PF10576 Iron-sulfur binding domain of endonuclease III BEN78_12300 PF00730 HhH-GPD superfamily base excision DNA repair protein BEN78_12300 PF00633 Helix-hairpin-helix motif BEN78_12310 PF00378 Enoyl-CoA hydratase/isomerase BEN78_12315 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BEN78_12315 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BEN78_12340 PF17755 UvrA DNA-binding domain BEN78_12340 PF00005 ABC transporter BEN78_12340 PF17760 UvrA interaction domain BEN78_12345 PF00829 Ribosomal prokaryotic L21 protein BEN78_12350 PF01016 Ribosomal L27 protein BEN78_12355 PF01926 50S ribosome-binding GTPase BEN78_12355 PF01018 GTP1/OBG BEN78_12360 PF01649 Ribosomal protein S20 BEN78_12365 PF03023 Lipid II flippase MurJ BEN78_12370 PF01687 Riboflavin kinase BEN78_12370 PF06574 FAD synthetase BEN78_12375 PF00133 tRNA synthetases class I (I, L, M and V) BEN78_12375 PF06827 Zinc finger found in FPG and IleRS BEN78_12375 PF08264 Anticodon-binding domain of tRNA BEN78_12380 PF01252 Signal peptidase (SPase) II BEN78_12385 PF02401 LytB protein BEN78_12415 PF05230 MASE2 domain BEN78_12415 PF00990 Diguanylate cyclase, GGDEF domain BEN78_12420 PF18073 Rubredoxin metal binding domain BEN78_12430 PF07690 Major Facilitator Superfamily BEN78_12435 PF00529 HlyD membrane-fusion protein of T1SS BEN78_12435 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BEN78_12440 PF02321 Outer membrane efflux protein BEN78_12445 PF01047 MarR family BEN78_12455 PF01578 Cytochrome C assembly protein BEN78_12460 PF00448 SRP54-type protein, GTPase domain BEN78_12460 PF02881 SRP54-type protein, helical bundle domain BEN78_12460 PF02978 Signal peptide binding domain BEN78_12465 PF03060 Nitronate monooxygenase BEN78_12475 PF00886 Ribosomal protein S16 BEN78_12480 PF05239 PRC-barrel domain BEN78_12480 PF01782 RimM N-terminal domain BEN78_12485 PF01746 tRNA (Guanine-1)-methyltransferase BEN78_12490 PF01245 Ribosomal protein L19 BEN78_12505 PF00072 Response regulator receiver domain BEN78_12505 PF00486 Transcriptional regulatory protein, C terminal BEN78_12515 PF01479 S4 domain BEN78_12525 PF13417 Glutathione S-transferase, N-terminal domain BEN78_12530 PF00141 Peroxidase BEN78_12535 PF05190 MutS family domain IV BEN78_12535 PF00488 MutS domain V BEN78_12535 PF05192 MutS domain III BEN78_12535 PF05188 MutS domain II BEN78_12535 PF01624 MutS domain I BEN78_12540 PF03150 Di-haem cytochrome c peroxidase BEN78_12550 PF02464 Competence-damaged protein BEN78_12555 PF03109 ABC1 family BEN78_12560 PF09334 tRNA synthetases class I (M) BEN78_12560 PF01588 Putative tRNA binding domain BEN78_12575 PF10609 NUBPL iron-transfer P-loop NTPase BEN78_12580 PF07715 TonB-dependent Receptor Plug Domain BEN78_12580 PF00593 TonB dependent receptor BEN78_12585 PF00692 dUTPase BEN78_12600 PF01738 Dienelactone hydrolase family BEN78_12605 PF00919 Uncharacterized protein family UPF0004 BEN78_12605 PF04055 Radical SAM superfamily BEN78_12605 PF18693 TRAM domain BEN78_12620 PF03449 Transcription elongation factor, N-terminal BEN78_12620 PF01272 Transcription elongation factor, GreA/GreB, C-term BEN78_12625 PF05872 Bacterial protein of unknown function (DUF853) BEN78_12635 PF06737 Transglycosylase-like domain BEN78_12640 PF02666 Phosphatidylserine decarboxylase BEN78_12645 PF02630 SCO1/SenC BEN78_12650 PF05175 Methyltransferase small domain BEN78_12660 PF01264 Chorismate synthase BEN78_12665 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BEN78_12665 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BEN78_12670 PF01118 Semialdehyde dehydrogenase, NAD binding domain BEN78_12670 PF02774 Semialdehyde dehydrogenase, dimerisation domain BEN78_12680 PF01416 tRNA pseudouridine synthase BEN78_12685 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BEN78_12690 PF03466 LysR substrate binding domain BEN78_12690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN78_12695 PF00291 Pyridoxal-phosphate dependent enzyme BEN78_12700 PF00290 Tryptophan synthase alpha chain BEN78_12705 PF01039 Carboxyl transferase domain BEN78_12705 PF17848 Acetyl-coA carboxylase zinc finger domain BEN78_12710 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BEN78_12710 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BEN78_12710 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BEN78_12710 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BEN78_12725 PF00121 Triosephosphate isomerase BEN78_12740 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BEN78_12745 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BEN78_12750 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BEN78_12755 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BEN78_12765 PF10531 SLBB domain BEN78_12765 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BEN78_12765 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BEN78_12770 PF00384 Molybdopterin oxidoreductase BEN78_12770 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal BEN78_12770 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BEN78_12775 PF00146 NADH dehydrogenase BEN78_12780 PF12838 4Fe-4S dicluster domain BEN78_12785 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BEN78_12790 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BEN78_12795 PF00361 Proton-conducting membrane transporter BEN78_12795 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BEN78_12800 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus BEN78_12800 PF00361 Proton-conducting membrane transporter BEN78_12805 PF00361 Proton-conducting membrane transporter BEN78_12840 PF02576 RimP N-terminal domain BEN78_12840 PF17384 RimP C-terminal SH3 domain BEN78_12845 PF13184 NusA-like KH domain BEN78_12845 PF00575 S1 RNA binding domain BEN78_12845 PF08529 NusA N-terminal domain BEN78_12850 PF11987 Translation-initiation factor 2 BEN78_12850 PF00009 Elongation factor Tu GTP binding domain BEN78_12850 PF04760 Translation initiation factor IF-2, N-terminal region BEN78_12850 PF08364 Bacterial translation initiation factor IF-2 associated region BEN78_12855 PF02033 Ribosome-binding factor A BEN78_12860 PF16198 tRNA pseudouridylate synthase B C-terminal domain BEN78_12860 PF01509 TruB family pseudouridylate synthase (N terminal domain) BEN78_12860 PF09157 Pseudouridine synthase II TruB, C-terminal BEN78_12865 PF00312 Ribosomal protein S15 BEN78_12870 PF00575 S1 RNA binding domain BEN78_12870 PF01138 3' exoribonuclease family, domain 1 BEN78_12870 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BEN78_12870 PF00013 KH domain BEN78_12870 PF03725 3' exoribonuclease family, domain 2 BEN78_12880 PF03412 Peptidase C39 family BEN78_12880 PF00005 ABC transporter BEN78_12880 PF00664 ABC transporter transmembrane region BEN78_12885 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BEN78_12885 PF00529 HlyD membrane-fusion protein of T1SS BEN78_12895 PF04376 Arginine-tRNA-protein transferase, N terminus BEN78_12895 PF04377 Arginine-tRNA-protein transferase, C terminus BEN78_12905 PF08281 Sigma-70, region 4 BEN78_12905 PF04542 Sigma-70 region 2 BEN78_12935 PF00106 short chain dehydrogenase BEN78_12945 PF01170 Putative RNA methylase family UPF0020 BEN78_12945 PF02926 THUMP domain BEN78_12945 PF10672 S-adenosylmethionine-dependent methyltransferase BEN78_12950 PF05726 Pirin C-terminal cupin domain BEN78_12950 PF02678 Pirin BEN78_12965 PF01476 LysM domain BEN78_12965 PF05257 CHAP domain BEN78_12975 PF03772 Competence protein BEN78_12975 PF00753 Metallo-beta-lactamase superfamily BEN78_12980 PF01618 MotA/TolQ/ExbB proton channel family BEN78_12985 PF02472 Biopolymer transport protein ExbD/TolR BEN78_12990 PF00005 ABC transporter BEN78_12990 PF00664 ABC transporter transmembrane region BEN78_12995 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BEN78_13000 PF01645 Conserved region in glutamate synthase BEN78_13015 PF02348 Cytidylyltransferase BEN78_13020 PF00578 AhpC/TSA family BEN78_13025 PF02151 UvrB/uvrC motif BEN78_13025 PF01541 GIY-YIG catalytic domain BEN78_13025 PF08459 UvrC Helix-hairpin-helix N-terminal BEN78_13030 PF01066 CDP-alcohol phosphatidyltransferase BEN78_13055 PF00990 Diguanylate cyclase, GGDEF domain BEN78_13060 PF03960 ArsC family BEN78_13075 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BEN78_13075 PF13378 Enolase C-terminal domain-like BEN78_13085 PF00593 TonB dependent receptor BEN78_13085 PF07715 TonB-dependent Receptor Plug Domain BEN78_13090 PF00144 Beta-lactamase BEN78_13110 PF00216 Bacterial DNA-binding protein BEN78_13115 PF05698 Bacterial trigger factor protein (TF) C-terminus BEN78_13120 PF05257 CHAP domain BEN78_13120 PF01476 LysM domain BEN78_13125 PF00753 Metallo-beta-lactamase superfamily BEN78_13125 PF16123 Hydroxyacylglutathione hydrolase C-terminus BEN78_13135 PF00075 RNase H BEN78_13140 PF00929 Exonuclease BEN78_13150 PF07536 HWE histidine kinase BEN78_13150 PF13426 PAS domain BEN78_13165 PF00158 Sigma-54 interaction domain BEN78_13165 PF00072 Response regulator receiver domain BEN78_13165 PF02954 Bacterial regulatory protein, Fis family BEN78_13180 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BEN78_13190 PF12706 Beta-lactamase superfamily domain BEN78_13190 PF00753 Metallo-beta-lactamase superfamily BEN78_13195 PF06463 Molybdenum Cofactor Synthesis C BEN78_13195 PF04055 Radical SAM superfamily BEN78_13205 PF01967 MoaC family BEN78_13225 PF00107 Zinc-binding dehydrogenase BEN78_13225 PF13823 Alcohol dehydrogenase GroES-associated BEN78_13225 PF08240 Alcohol dehydrogenase GroES-like domain BEN78_13255 PF13087 AAA domain BEN78_13255 PF13195 Protein of unknown function (DUF4011) BEN78_13255 PF13087 AAA domain BEN78_13255 PF13086 AAA domain BEN78_13255 PF13086 AAA domain BEN78_13255 PF13195 Protein of unknown function (DUF4011) BEN78_13265 PF12170 DNA polymerase III tau subunit V interacting with alpha BEN78_13265 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding BEN78_13265 PF12169 DNA polymerase III subunits gamma and tau domain III BEN78_13270 PF02575 YbaB/EbfC DNA-binding family BEN78_13275 PF13662 Toprim domain BEN78_13275 PF02132 RecR protein BEN78_13280 PF01230 HIT domain BEN78_13290 PF11992 Domain of unknown function (DUF3488) BEN78_13290 PF01841 Transglutaminase-like superfamily BEN78_13290 PF13559 Domain of unknown function (DUF4129) BEN78_13300 PF07726 ATPase family associated with various cellular activities (AAA) BEN78_13300 PF17863 AAA lid domain BEN78_13310 PF00795 Carbon-nitrogen hydrolase BEN78_13315 PF00849 RNA pseudouridylate synthase BEN78_13315 PF01479 S4 domain BEN78_13320 PF04079 Segregation and condensation complex subunit ScpB BEN78_13325 PF02616 Segregation and condensation protein ScpA BEN78_13330 PF00356 Bacterial regulatory proteins, lacI family BEN78_13350 PF00528 Binding-protein-dependent transport system inner membrane component BEN78_13355 PF00528 Binding-protein-dependent transport system inner membrane component BEN78_13380 PF18793 Nitrous oxide reductase propeller repeat 2 BEN78_13380 PF18764 Nitrous oxide reductase propeller repeat BEN78_13380 PF13473 Cupredoxin-like domain BEN78_13385 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BEN78_13390 PF12801 4Fe-4S binding domain BEN78_13390 PF04205 FMN-binding domain BEN78_13395 PF05048 Periplasmic copper-binding protein (NosD) BEN78_13400 PF00005 ABC transporter BEN78_13405 PF12679 ABC-2 family transporter protein BEN78_13410 PF05573 NosL BEN78_13420 PF02424 ApbE family BEN78_13425 PF01081 KDPG and KHG aldolase BEN78_13435 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BEN78_13440 PF02685 Glucokinase BEN78_13445 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BEN78_13445 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BEN78_13450 PF00005 ABC transporter BEN78_13450 PF17912 MalK OB fold domain BEN78_13455 PF02463 RecF/RecN/SMC N terminal domain BEN78_13460 PF04354 ZipA, C-terminal FtsZ-binding domain BEN78_13465 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BEN78_13475 PF00152 tRNA synthetases class II (D, K and N) BEN78_13480 PF01008 Initiation factor 2 subunit family BEN78_13485 PF00521 DNA gyrase/topoisomerase IV, subunit A BEN78_13485 PF03989 DNA gyrase C-terminal domain, beta-propeller BEN78_13505 PF03358 NADPH-dependent FMN reductase BEN78_13510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN78_13510 PF03466 LysR substrate binding domain BEN78_13520 PF08534 Redoxin BEN78_13525 PF00011 Hsp20/alpha crystallin family BEN78_13530 PF01556 DnaJ C terminal domain BEN78_13530 PF00226 DnaJ domain BEN78_13550 PF03641 Possible lysine decarboxylase BEN78_13555 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN78_13555 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BEN78_13560 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BEN78_13560 PF00364 Biotin-requiring enzyme BEN78_13560 PF02817 e3 binding domain BEN78_13565 PF02779 Transketolase, pyrimidine binding domain BEN78_13565 PF16870 2-oxoglutarate dehydrogenase C-terminal BEN78_13565 PF00676 Dehydrogenase E1 component BEN78_13565 PF16078 2-oxoglutarate dehydrogenase N-terminus BEN78_13575 PF08007 Cupin superfamily protein BEN78_13585 PF08328 Adenylosuccinate lyase C-terminal BEN78_13585 PF00206 Lyase BEN78_13590 PF00206 Lyase BEN78_13590 PF10415 Fumarase C C-terminus BEN78_13620 PF00005 ABC transporter BEN78_13625 PF00392 Bacterial regulatory proteins, gntR family BEN78_13635 PF00255 Glutathione peroxidase BEN78_13640 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BEN78_13640 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BEN78_13645 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BEN78_13645 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BEN78_13650 PF04102 SlyX BEN78_13665 PF01979 Amidohydrolase family BEN78_13670 PF02310 B12 binding domain BEN78_13670 PF02607 B12 binding domain BEN78_13670 PF02965 Vitamin B12 dependent methionine synthase, activation domain BEN78_13670 PF00809 Pterin binding enzyme BEN78_13670 PF02574 Homocysteine S-methyltransferase BEN78_13675 PF02965 Vitamin B12 dependent methionine synthase, activation domain BEN78_13675 PF02607 B12 binding domain BEN78_13675 PF02310 B12 binding domain BEN78_13675 PF02574 Homocysteine S-methyltransferase BEN78_13675 PF00809 Pterin binding enzyme BEN78_13680 PF13847 Methyltransferase domain BEN78_13680 PF03551 Transcriptional regulator PadR-like family BEN78_13690 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BEN78_13690 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BEN78_13690 PF01842 ACT domain BEN78_13695 PF02913 FAD linked oxidases, C-terminal domain BEN78_13695 PF01565 FAD binding domain BEN78_13710 PF09285 Elongation factor P, C-terminal BEN78_13710 PF01132 Elongation factor P (EF-P) OB domain BEN78_13710 PF08207 Elongation factor P (EF-P) KOW-like domain BEN78_13720 PF00106 short chain dehydrogenase BEN78_13730 PF17910 FeoB cytosolic helical domain BEN78_13730 PF07664 Ferrous iron transport protein B C terminus BEN78_13730 PF04023 FeoA domain BEN78_13730 PF07670 Nucleoside recognition BEN78_13730 PF02421 Ferrous iron transport protein B BEN78_13765 PF02803 Thiolase, C-terminal domain BEN78_13765 PF00108 Thiolase, N-terminal domain BEN78_13770 PF00082 Subtilase family BEN78_13770 PF03797 Autotransporter beta-domain BEN78_13770 PF12951 Passenger-associated-transport-repeat BEN78_13775 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BEN78_13775 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BEN78_13780 PF13091 PLD-like domain BEN78_13785 PF02618 YceG-like family BEN78_13790 PF02223 Thymidylate kinase BEN78_13795 PF09115 DNA polymerase III, delta subunit, C terminal BEN78_13815 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BEN78_13815 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BEN78_13815 PF00378 Enoyl-CoA hydratase/isomerase BEN78_13820 PF04542 Sigma-70 region 2 BEN78_13820 PF08281 Sigma-70, region 4 BEN78_13830 PF13180 PDZ domain BEN78_13835 PF00679 Elongation factor G C-terminus BEN78_13835 PF06421 GTP-binding protein LepA C-terminus BEN78_13835 PF03144 Elongation factor Tu domain 2 BEN78_13835 PF00009 Elongation factor Tu GTP binding domain BEN78_13840 PF10502 Signal peptidase, peptidase S26 BEN78_13850 PF00035 Double-stranded RNA binding motif BEN78_13850 PF14622 Ribonuclease-III-like BEN78_13855 PF01926 50S ribosome-binding GTPase BEN78_13855 PF07650 KH domain BEN78_13865 PF11967 Recombination protein O N terminal BEN78_13865 PF02565 Recombination protein O C terminal BEN78_13885 PF05958 tRNA (Uracil-5-)-methyltransferase BEN78_13895 PF01323 DSBA-like thioredoxin domain BEN78_13900 PF00933 Glycosyl hydrolase family 3 N terminal domain BEN78_13910 PF01048 Phosphorylase superfamily BEN78_13915 PF00313 'Cold-shock' DNA-binding domain BEN78_13920 PF00440 Bacterial regulatory proteins, tetR family BEN78_13930 PF09330 D-lactate dehydrogenase, membrane binding BEN78_13930 PF01565 FAD binding domain BEN78_13935 PF01070 FMN-dependent dehydrogenase BEN78_13940 PF07729 FCD domain BEN78_13940 PF00392 Bacterial regulatory proteins, gntR family BEN78_13945 PF03466 LysR substrate binding domain BEN78_13945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN78_13950 PF02525 Flavodoxin-like fold BEN78_13960 PF00593 TonB dependent receptor BEN78_13960 PF07715 TonB-dependent Receptor Plug Domain BEN78_13970 PF13185 GAF domain BEN78_13980 PF00873 AcrB/AcrD/AcrF family BEN78_13985 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BEN78_14000 PF00873 AcrB/AcrD/AcrF family BEN78_14005 PF01494 FAD binding domain BEN78_14010 PF18158 Adaptive response protein AidB N-terminal domain BEN78_14010 PF02770 Acyl-CoA dehydrogenase, middle domain BEN78_14010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN78_14015 PF01022 Bacterial regulatory protein, arsR family BEN78_14025 PF00005 ABC transporter BEN78_14025 PF00664 ABC transporter transmembrane region BEN78_14030 PF01205 Uncharacterized protein family UPF0029 BEN78_14040 PF04542 Sigma-70 region 2 BEN78_14040 PF08281 Sigma-70, region 4 BEN78_14045 PF03707 Bacterial signalling protein N terminal repeat BEN78_14045 PF00990 Diguanylate cyclase, GGDEF domain BEN78_14045 PF00563 EAL domain BEN78_14050 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN78_14050 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BEN78_14055 PF01258 Prokaryotic dksA/traR C4-type zinc finger BEN78_14060 PF01042 Endoribonuclease L-PSP BEN78_14090 PF01794 Ferric reductase like transmembrane component BEN78_14095 PF00174 Oxidoreductase molybdopterin binding domain BEN78_14100 PF00266 Aminotransferase class-V BEN78_14105 PF01842 ACT domain BEN78_14105 PF01817 Chorismate mutase type II BEN78_14105 PF00800 Prephenate dehydratase BEN78_14110 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BEN78_14115 PF03544 Gram-negative bacterial TonB protein C-terminal BEN78_14125 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BEN78_14125 PF02403 Seryl-tRNA synthetase N-terminal domain BEN78_14130 PF03466 LysR substrate binding domain BEN78_14130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN78_14145 PF02659 Putative manganese efflux pump BEN78_14165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN78_14170 PF01668 SmpB protein BEN78_14180 PF03658 RnfH family Ubiquitin BEN78_14185 PF04355 SmpA / OmlA family BEN78_14190 PF01475 Ferric uptake regulator family BEN78_14195 PF02463 RecF/RecN/SMC N terminal domain BEN78_14195 PF13476 AAA domain BEN78_14200 PF01628 HrcA protein C terminal domain BEN78_14200 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding BEN78_14205 PF01025 GrpE BEN78_14210 PF00012 Hsp70 protein BEN78_14215 PF00684 DnaJ central domain BEN78_14215 PF00226 DnaJ domain BEN78_14215 PF01556 DnaJ C terminal domain BEN78_14220 PF01113 Dihydrodipicolinate reductase, N-terminus BEN78_14220 PF05173 Dihydrodipicolinate reductase, C-terminus BEN78_14225 PF00117 Glutamine amidotransferase class-I BEN78_14225 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BEN78_14235 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BEN78_14235 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BEN78_14235 PF02142 MGS-like domain BEN78_14240 PF01272 Transcription elongation factor, GreA/GreB, C-term BEN78_14240 PF03449 Transcription elongation factor, N-terminal BEN78_14250 PF02272 DHHA1 domain BEN78_14250 PF01368 DHH family BEN78_14250 PF17768 RecJ OB domain BEN78_14260 PF00472 RF-1 domain BEN78_14260 PF03462 PCRF domain BEN78_14265 PF01336 OB-fold nucleic acid binding domain BEN78_14265 PF00152 tRNA synthetases class II (D, K and N) BEN78_14270 PF00072 Response regulator receiver domain BEN78_14275 PF00072 Response regulator receiver domain BEN78_14275 PF01627 Hpt domain BEN78_14275 PF00512 His Kinase A (phospho-acceptor) domain BEN78_14275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN78_14280 PF00378 Enoyl-CoA hydratase/isomerase BEN78_14285 PF13193 AMP-binding enzyme C-terminal domain BEN78_14285 PF00501 AMP-binding enzyme BEN78_14290 PF00330 Aconitase family (aconitate hydratase) BEN78_14290 PF00694 Aconitase C-terminal domain BEN78_14295 PF03466 LysR substrate binding domain BEN78_14295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN78_14300 PF04303 PrpF protein BEN78_14310 PF00005 ABC transporter BEN78_14315 PF00528 Binding-protein-dependent transport system inner membrane component BEN78_14335 PF11791 Aconitate B N-terminal domain BEN78_14335 PF00330 Aconitase family (aconitate hydratase) BEN78_14335 PF06434 Aconitate hydratase 2 N-terminus BEN78_14355 PF00072 Response regulator receiver domain BEN78_14355 PF01339 CheB methylesterase BEN78_14360 PF03975 CheD chemotactic sensory transduction BEN78_14365 PF03705 CheR methyltransferase, all-alpha domain BEN78_14365 PF01739 CheR methyltransferase, SAM binding domain BEN78_14380 PF01584 CheW-like domain BEN78_14385 PF07238 PilZ domain BEN78_14385 PF07317 Flagellar regulator YcgR BEN78_14390 PF02203 Tar ligand binding domain homologue BEN78_14390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BEN78_14390 PF00672 HAMP domain BEN78_14395 PF02203 Tar ligand binding domain homologue BEN78_14395 PF00672 HAMP domain BEN78_14395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BEN78_14405 PF00072 Response regulator receiver domain BEN78_14415 PF01584 CheW-like domain BEN78_14420 PF13614 AAA domain BEN78_14430 PF01618 MotA/TolQ/ExbB proton channel family BEN78_14435 PF07194 P2 response regulator binding domain BEN78_14435 PF01584 CheW-like domain BEN78_14435 PF02895 Signal transducing histidine kinase, homodimeric domain BEN78_14435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN78_14435 PF01627 Hpt domain BEN78_14445 PF00072 Response regulator receiver domain BEN78_14450 PF04542 Sigma-70 region 2 BEN78_14450 PF04545 Sigma-70, region 4 BEN78_14450 PF04539 Sigma-70 region 3 BEN78_14455 PF10609 NUBPL iron-transfer P-loop NTPase BEN78_14460 PF00448 SRP54-type protein, GTPase domain BEN78_14465 PF00771 FHIPEP family BEN78_14470 PF01312 FlhB HrpN YscU SpaS Family BEN78_14475 PF01311 Bacterial export proteins, family 1 BEN78_14480 PF01313 Bacterial export proteins, family 3 BEN78_14485 PF00813 FliP family BEN78_14490 PF04347 Flagellar biosynthesis protein, FliO BEN78_14495 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BEN78_14500 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BEN78_14500 PF02154 Flagellar motor switch protein FliM BEN78_14520 PF18269 T3SS EscN ATPase C-terminal domain BEN78_14520 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BEN78_14530 PF14841 FliG middle domain BEN78_14530 PF14842 FliG N-terminal domain BEN78_14530 PF01706 FliG C-terminal domain BEN78_14535 PF08345 Flagellar M-ring protein C-terminal BEN78_14535 PF01514 Secretory protein of YscJ/FliF family BEN78_14540 PF02049 Flagellar hook-basal body complex protein FliE BEN78_14545 PF02954 Bacterial regulatory protein, Fis family BEN78_14545 PF00072 Response regulator receiver domain BEN78_14545 PF00158 Sigma-54 interaction domain BEN78_14550 PF01339 CheB methylesterase BEN78_14550 PF00072 Response regulator receiver domain BEN78_14555 PF00309 Sigma-54 factor, Activator interacting domain (AID) BEN78_14555 PF04552 Sigma-54, DNA binding domain BEN78_14555 PF04963 Sigma-54 factor, core binding domain BEN78_14560 PF00072 Response regulator receiver domain BEN78_14560 PF00196 Bacterial regulatory proteins, luxR family BEN78_14575 PF02561 Flagellar protein FliS BEN78_14595 PF00669 Bacterial flagellin N-terminal helical region BEN78_14600 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BEN78_14600 PF00460 Flagella basal body rod protein BEN78_14605 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BEN78_14605 PF10135 Rod binding protein BEN78_14610 PF02119 Flagellar P-ring protein BEN78_14615 PF02107 Flagellar L-ring protein BEN78_14620 PF00460 Flagella basal body rod protein BEN78_14620 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BEN78_14625 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BEN78_14625 PF00460 Flagella basal body rod protein BEN78_14635 PF13860 FlgD Ig-like domain BEN78_14635 PF03963 Flagellar hook capping protein - N-terminal region BEN78_14635 PF13861 FlgD Tudor-like domain BEN78_14640 PF00460 Flagella basal body rod protein BEN78_14640 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BEN78_14645 PF00460 Flagella basal body rod protein BEN78_14650 PF00072 Response regulator receiver domain BEN78_14650 PF01584 CheW-like domain BEN78_14670 PF08448 PAS fold BEN78_14670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN78_14670 PF00512 His Kinase A (phospho-acceptor) domain BEN78_14670 PF13188 PAS domain BEN78_14670 PF00072 Response regulator receiver domain BEN78_14675 PF03707 Bacterial signalling protein N terminal repeat BEN78_14675 PF00990 Diguanylate cyclase, GGDEF domain BEN78_14675 PF00563 EAL domain BEN78_14680 PF07730 Histidine kinase BEN78_14680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN78_14680 PF05231 MASE1 BEN78_14685 PF13188 PAS domain BEN78_14685 PF00990 Diguanylate cyclase, GGDEF domain BEN78_14685 PF00563 EAL domain BEN78_14685 PF03707 Bacterial signalling protein N terminal repeat BEN78_14700 PF04356 Protein of unknown function (DUF489) BEN78_14710 PF00293 NUDIX domain BEN78_14720 PF10431 C-terminal, D2-small domain, of ClpB protein BEN78_14720 PF02861 Clp amino terminal domain, pathogenicity island component BEN78_14720 PF00004 ATPase family associated with various cellular activities (AAA) BEN78_14720 PF07724 AAA domain (Cdc48 subfamily) BEN78_14720 PF17871 AAA lid domain BEN78_14725 PF01176 Translation initiation factor 1A / IF-1 BEN78_14730 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BEN78_14745 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN78_14750 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BEN78_14750 PF17854 FtsK alpha domain BEN78_14750 PF01580 FtsK/SpoIIIE family BEN78_14750 PF09397 Ftsk gamma domain BEN78_14755 PF03548 Outer membrane lipoprotein carrier protein LolA BEN78_14770 PF03449 Transcription elongation factor, N-terminal BEN78_14770 PF01272 Transcription elongation factor, GreA/GreB, C-term BEN78_14785 PF06114 IrrE N-terminal-like domain BEN78_14790 PF01381 Helix-turn-helix BEN78_14790 PF08671 Anti-repressor SinI BEN78_14835 PF05275 Copper resistance protein B precursor (CopB) BEN78_14840 PF07731 Multicopper oxidase BEN78_14840 PF07732 Multicopper oxidase BEN78_14840 PF00394 Multicopper oxidase BEN78_14850 PF00990 Diguanylate cyclase, GGDEF domain BEN78_14850 PF00563 EAL domain BEN78_14850 PF00360 Phytochrome region BEN78_14850 PF01590 GAF domain BEN78_14870 PF03618 Kinase/pyrophosphorylase BEN78_14875 PF00391 PEP-utilising enzyme, mobile domain BEN78_14875 PF02896 PEP-utilising enzyme, TIM barrel domain BEN78_14875 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BEN78_14880 PF00929 Exonuclease BEN78_14885 PF14437 MafB19-like deaminase BEN78_14895 PF07930 D-aminopeptidase, domain B BEN78_14895 PF00144 Beta-lactamase BEN78_14900 PF13378 Enolase C-terminal domain-like BEN78_14900 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BEN78_14905 PF00144 Beta-lactamase BEN78_14910 PF00854 POT family BEN78_14920 PF07715 TonB-dependent Receptor Plug Domain BEN78_14920 PF00593 TonB dependent receptor BEN78_14950 PF03466 LysR substrate binding domain BEN78_14950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN78_14955 PF00561 alpha/beta hydrolase fold BEN78_14960 PF00144 Beta-lactamase BEN78_14960 PF11954 Domain of unknown function (DUF3471) BEN78_14965 PF07715 TonB-dependent Receptor Plug Domain BEN78_14965 PF00593 TonB dependent receptor BEN78_14970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN78_14970 PF03466 LysR substrate binding domain BEN78_14975 PF00676 Dehydrogenase E1 component BEN78_14975 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal BEN78_14980 PF02779 Transketolase, pyrimidine binding domain BEN78_14980 PF02780 Transketolase, C-terminal domain BEN78_14985 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BEN78_14985 PF02817 e3 binding domain BEN78_14985 PF00364 Biotin-requiring enzyme BEN78_14990 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN78_14990 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BEN78_14995 PF01063 Amino-transferase class IV BEN78_15010 PF00682 HMGL-like BEN78_15015 PF02785 Biotin carboxylase C-terminal domain BEN78_15015 PF00364 Biotin-requiring enzyme BEN78_15015 PF00289 Biotin carboxylase, N-terminal domain BEN78_15015 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BEN78_15020 PF00378 Enoyl-CoA hydratase/isomerase BEN78_15025 PF01039 Carboxyl transferase domain BEN78_15030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN78_15030 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN78_15030 PF02770 Acyl-CoA dehydrogenase, middle domain BEN78_15040 PF07690 Major Facilitator Superfamily BEN78_15045 PF01638 HxlR-like helix-turn-helix BEN78_15055 PF13533 Biotin-lipoyl like BEN78_15065 PF04632 Fusaric acid resistance protein family BEN78_15070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN78_15070 PF03466 LysR substrate binding domain BEN78_15075 PF02627 Carboxymuconolactone decarboxylase family BEN78_15080 PF00464 Serine hydroxymethyltransferase BEN78_15090 PF02540 NAD synthase BEN78_15090 PF00958 GMP synthase C terminal domain BEN78_15090 PF00117 Glutamine amidotransferase class-I BEN78_15095 PF01168 Alanine racemase, N-terminal domain BEN78_15100 PF03594 Benzoate membrane transport protein BEN78_15120 PF13657 HipA N-terminal domain BEN78_15120 PF07804 HipA-like C-terminal domain BEN78_15130 PF03466 LysR substrate binding domain BEN78_15130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN78_15135 PF00753 Metallo-beta-lactamase superfamily BEN78_15140 PF00144 Beta-lactamase BEN78_15155 PF02082 Transcriptional regulator BEN78_15220 PF18337 RapA N-terminal Tudor like domain BEN78_15220 PF18339 RapA N-terminal Tudor like domain 1 BEN78_15220 PF00176 SNF2 family N-terminal domain BEN78_15220 PF12137 RNA polymerase recycling family C-terminal BEN78_15220 PF00271 Helicase conserved C-terminal domain BEN78_15225 PF00271 Helicase conserved C-terminal domain BEN78_15225 PF09369 Domain of unknown function (DUF1998) BEN78_15225 PF00270 DEAD/DEAH box helicase BEN78_15230 PF00117 Glutamine amidotransferase class-I BEN78_15230 PF00958 GMP synthase C terminal domain BEN78_15230 PF02540 NAD synthase BEN78_15240 PF00571 CBS domain BEN78_15240 PF00478 IMP dehydrogenase / GMP reductase domain BEN78_15245 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BEN78_15245 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BEN78_15265 PF03466 LysR substrate binding domain BEN78_15265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN78_15270 PF00899 ThiF family BEN78_15275 PF00994 Probable molybdopterin binding domain BEN78_15275 PF03454 MoeA C-terminal region (domain IV) BEN78_15275 PF03453 MoeA N-terminal region (domain I and II) BEN78_15280 PF12804 MobA-like NTP transferase domain BEN78_15285 PF01926 50S ribosome-binding GTPase BEN78_15285 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BEN78_15295 PF01011 PQQ enzyme repeat BEN78_15295 PF13360 PQQ-like domain BEN78_15305 PF13464 Domain of unknown function (DUF4115) BEN78_15315 PF04055 Radical SAM superfamily BEN78_15320 PF00334 Nucleoside diphosphate kinase BEN78_15330 PF00378 Enoyl-CoA hydratase/isomerase BEN78_15330 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BEN78_15330 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BEN78_15335 PF02803 Thiolase, C-terminal domain BEN78_15335 PF00108 Thiolase, N-terminal domain BEN78_15340 PF13488 Glycine zipper BEN78_15340 PF00691 OmpA family BEN78_15350 PF02657 Fe-S metabolism associated domain BEN78_15365 PF01258 Prokaryotic dksA/traR C4-type zinc finger BEN78_15370 PF01809 Putative membrane protein insertion efficiency factor BEN78_15380 PF08460 Bacterial SH3 domain BEN78_15380 PF01551 Peptidase family M23 BEN78_15390 PF00082 Subtilase family BEN78_15390 PF12951 Passenger-associated-transport-repeat BEN78_15390 PF03797 Autotransporter beta-domain BEN78_15395 PF02649 Type I GTP cyclohydrolase folE2 BEN78_15405 PF13419 Haloacid dehalogenase-like hydrolase BEN78_15415 PF01979 Amidohydrolase family BEN78_15425 PF08207 Elongation factor P (EF-P) KOW-like domain BEN78_15425 PF01132 Elongation factor P (EF-P) OB domain BEN78_15425 PF09285 Elongation factor P, C-terminal BEN78_15430 PF04055 Radical SAM superfamily BEN78_15435 PF00563 EAL domain BEN78_15435 PF12792 CSS motif domain associated with EAL BEN78_15440 PF01435 Peptidase family M48 BEN78_15445 PF00749 tRNA synthetases class I (E and Q), catalytic domain BEN78_15450 PF00106 short chain dehydrogenase BEN78_15455 PF05233 PHB accumulation regulatory domain BEN78_15455 PF07879 PHB/PHA accumulation regulator DNA-binding domain BEN78_15460 PF00106 short chain dehydrogenase BEN78_15470 PF03781 Sulfatase-modifying factor enzyme 1 BEN78_15475 PF00570 HRDC domain BEN78_15475 PF01612 3'-5' exonuclease BEN78_15495 PF01726 LexA DNA binding domain BEN78_15495 PF00717 Peptidase S24-like BEN78_15510 PF02811 PHP domain BEN78_15510 PF14579 Helix-hairpin-helix motif BEN78_15510 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BEN78_15510 PF07733 Bacterial DNA polymerase III alpha NTPase domain BEN78_15515 PF08281 Sigma-70, region 4 BEN78_15515 PF04542 Sigma-70 region 2 BEN78_15530 PF00171 Aldehyde dehydrogenase family BEN78_15540 PF01180 Dihydroorotate dehydrogenase BEN78_15545 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BEN78_15545 PF01565 FAD binding domain BEN78_15555 PF00005 ABC transporter BEN78_15560 PF12704 MacB-like periplasmic core domain BEN78_15560 PF02687 FtsX-like permease family BEN78_15570 PF03937 Flavinator of succinate dehydrogenase BEN78_15575 PF13085 2Fe-2S iron-sulfur cluster binding domain BEN78_15580 PF02910 Fumarate reductase flavoprotein C-term BEN78_15580 PF00890 FAD binding domain BEN78_15585 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BEN78_15590 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BEN78_15595 PF01571 Aminomethyltransferase folate-binding domain BEN78_15600 PF01389 OmpA-like transmembrane domain BEN78_15600 PF00691 OmpA family BEN78_15605 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BEN78_15605 PF02780 Transketolase, C-terminal domain BEN78_15605 PF02779 Transketolase, pyrimidine binding domain BEN78_15610 PF14497 Glutathione S-transferase, C-terminal domain BEN78_15610 PF02798 Glutathione S-transferase, N-terminal domain BEN78_15625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN78_15625 PF02770 Acyl-CoA dehydrogenase, middle domain BEN78_15625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN78_15640 PF01026 TatD related DNase BEN78_15645 PF00899 ThiF family BEN78_15660 PF00313 'Cold-shock' DNA-binding domain BEN78_15675 PF02253 Phospholipase A1 BEN78_15685 PF05681 Fumarate hydratase (Fumerase) BEN78_15685 PF05683 Fumarase C-terminus BEN78_15690 PF01168 Alanine racemase, N-terminal domain BEN78_15695 PF08543 Phosphomethylpyrimidine kinase BEN78_15715 PF00005 ABC transporter BEN78_15720 PF03109 ABC1 family BEN78_15725 PF00175 Oxidoreductase NAD-binding domain BEN78_15725 PF00970 Oxidoreductase FAD-binding domain BEN78_15730 PF00255 Glutathione peroxidase BEN78_15735 PF01432 Peptidase family M3 BEN78_15750 PF00313 'Cold-shock' DNA-binding domain BEN78_15765 PF00854 POT family BEN78_15785 PF03796 DnaB-like helicase C terminal domain BEN78_15785 PF00772 DnaB-like helicase N terminal domain BEN78_15790 PF01281 Ribosomal protein L9, N-terminal domain BEN78_15790 PF03948 Ribosomal protein L9, C-terminal domain BEN78_15795 PF01084 Ribosomal protein S18 BEN78_15800 PF01250 Ribosomal protein S6 BEN78_15805 PF07690 Major Facilitator Superfamily BEN78_15805 PF00083 Sugar (and other) transporter BEN78_15815 PF00115 Cytochrome C and Quinol oxidase polypeptide I BEN78_15820 PF00510 Cytochrome c oxidase subunit III BEN78_15825 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BEN78_15830 PF02104 SURF1 family BEN78_15840 PF01336 OB-fold nucleic acid binding domain BEN78_15840 PF00152 tRNA synthetases class II (D, K and N) BEN78_15860 PF06827 Zinc finger found in FPG and IleRS BEN78_15860 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BEN78_15860 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BEN78_15865 PF00171 Aldehyde dehydrogenase family BEN78_15870 PF00484 Carbonic anhydrase BEN78_15875 PF01042 Endoribonuclease L-PSP BEN78_15880 PF06052 3-hydroxyanthranilic acid dioxygenase BEN78_15890 PF00266 Aminotransferase class-V BEN78_15900 PF01494 FAD binding domain BEN78_15905 PF08411 Exonuclease C-terminal BEN78_15905 PF00929 Exonuclease BEN78_15920 PF01569 PAP2 superfamily BEN78_15925 PF04551 GcpE protein BEN78_15935 PF02954 Bacterial regulatory protein, Fis family BEN78_15935 PF00072 Response regulator receiver domain BEN78_15945 PF00849 RNA pseudouridylate synthase BEN78_15950 PF10459 Peptidase S46 BEN78_15965 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BEN78_15965 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BEN78_15970 PF00384 Molybdopterin oxidoreductase BEN78_16000 PF01979 Amidohydrolase family BEN78_16010 PF07043 Protein of unknown function (DUF1328) BEN78_16045 PF02667 Short chain fatty acid transporter BEN78_16050 PF05649 Peptidase family M13 BEN78_16050 PF01431 Peptidase family M13 BEN78_16055 PF01263 Aldose 1-epimerase BEN78_16060 PF00722 Glycosyl hydrolases family 16 BEN78_16065 PF04960 Glutaminase BEN78_16070 PF13409 Glutathione S-transferase, N-terminal domain BEN78_16080 PF03597 Cytochrome oxidase maturation protein cbb3-type BEN78_16085 PF00403 Heavy-metal-associated domain BEN78_16095 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase BEN78_16095 PF12801 4Fe-4S binding domain BEN78_16095 PF13746 4Fe-4S dicluster domain BEN78_16105 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BEN78_16105 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP BEN78_16115 PF00115 Cytochrome C and Quinol oxidase polypeptide I BEN78_16120 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BEN78_16125 PF00248 Aldo/keto reductase family BEN78_16175 PF01380 SIS domain BEN78_16180 PF08013 Tagatose 6 phosphate kinase BEN78_16190 PF16874 Glycosyl hydrolase family 36 C-terminal domain BEN78_16190 PF16875 Glycosyl hydrolase family 36 N-terminal domain BEN78_16200 PF08220 DeoR-like helix-turn-helix domain BEN78_16200 PF00455 DeoR C terminal sensor domain BEN78_16205 PF17676 LD-carboxypeptidase C-terminal domain BEN78_16205 PF02016 LD-carboxypeptidase N-terminal domain BEN78_16235 PF02983 Alpha-lytic protease prodomain BEN78_16235 PF00089 Trypsin BEN78_16250 PF05971 RNA methyltransferase BEN78_16290 PF02661 Fic/DOC family BEN78_16290 PF13784 Fic/DOC family N-terminal BEN78_16295 PF01844 HNH endonuclease BEN78_16325 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system BEN78_16350 PF01037 Lrp/AsnC ligand binding domain BEN78_16355 PF01266 FAD dependent oxidoreductase BEN78_16360 PF00842 Alanine racemase, C-terminal domain BEN78_16360 PF01168 Alanine racemase, N-terminal domain BEN78_16365 PF00425 chorismate binding enzyme BEN78_16365 PF04715 Anthranilate synthase component I, N terminal region BEN78_16385 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BEN78_16395 PF00270 DEAD/DEAH box helicase BEN78_16395 PF00271 Helicase conserved C-terminal domain BEN78_16395 PF03880 DbpA RNA binding domain BEN78_16400 PF02540 NAD synthase BEN78_16400 PF00958 GMP synthase C terminal domain BEN78_16400 PF00117 Glutamine amidotransferase class-I BEN78_16415 PF02789 Cytosol aminopeptidase family, N-terminal domain BEN78_16415 PF00883 Cytosol aminopeptidase family, catalytic domain BEN78_16440 PF00083 Sugar (and other) transporter BEN78_16440 PF07690 Major Facilitator Superfamily BEN78_16445 PF07715 TonB-dependent Receptor Plug Domain BEN78_16445 PF00593 TonB dependent receptor BEN78_16450 PF01047 MarR family BEN78_16465 PF00440 Bacterial regulatory proteins, tetR family BEN78_16485 PF00326 Prolyl oligopeptidase family BEN78_16485 PF07676 WD40-like Beta Propeller Repeat BEN78_16495 PF17284 Spermidine synthase tetramerisation domain BEN78_16520 PF00553 Cellulose binding domain BEN78_16520 PF00041 Fibronectin type III domain BEN78_16520 PF00704 Glycosyl hydrolases family 18 BEN78_16525 PF01513 ATP-NAD kinase BEN78_16530 PF05088 Bacterial NAD-glutamate dehydrogenase BEN78_16535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN78_16535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN78_16535 PF02770 Acyl-CoA dehydrogenase, middle domain BEN78_16540 PF13520 Amino acid permease BEN78_16545 PF13520 Amino acid permease BEN78_16555 PF00596 Class II Aldolase and Adducin N-terminal domain BEN78_16560 PF03079 ARD/ARD' family BEN78_16575 PF02601 Exonuclease VII, large subunit BEN78_16575 PF13742 OB-fold nucleic acid binding domain BEN78_16580 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BEN78_16580 PF00205 Thiamine pyrophosphate enzyme, central domain BEN78_16580 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BEN78_16585 PF00171 Aldehyde dehydrogenase family BEN78_16590 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BEN78_16590 PF01502 Phosphoribosyl-AMP cyclohydrolase BEN78_16595 PF00977 Histidine biosynthesis protein BEN78_16600 PF00977 Histidine biosynthesis protein BEN78_16605 PF00117 Glutamine amidotransferase class-I BEN78_16610 PF00475 Imidazoleglycerol-phosphate dehydratase BEN78_16610 PF08645 Polynucleotide kinase 3 phosphatase BEN78_16615 PF00155 Aminotransferase class I and II BEN78_16620 PF00815 Histidinol dehydrogenase BEN78_16625 PF08029 HisG, C-terminal domain BEN78_16625 PF01634 ATP phosphoribosyltransferase BEN78_16645 PF00221 Aromatic amino acid lyase BEN78_16655 PF13393 Histidyl-tRNA synthetase BEN78_16655 PF03129 Anticodon binding domain BEN78_16665 PF00664 ABC transporter transmembrane region BEN78_16665 PF00005 ABC transporter BEN78_16685 PF13193 AMP-binding enzyme C-terminal domain BEN78_16685 PF00501 AMP-binding enzyme BEN78_16690 PF00171 Aldehyde dehydrogenase family BEN78_16705 PF00696 Amino acid kinase family BEN78_16705 PF01472 PUA domain BEN78_16715 PF00206 Lyase BEN78_16720 PF01118 Semialdehyde dehydrogenase, NAD binding domain BEN78_16725 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase BEN78_16725 PF00696 Amino acid kinase family BEN78_16730 PF07687 Peptidase dimerisation domain BEN78_16730 PF01546 Peptidase family M20/M25/M40 BEN78_16735 PF00764 Arginosuccinate synthase BEN78_16740 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BEN78_16740 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BEN78_16750 PF09190 DALR domain BEN78_16750 PF01406 tRNA synthetases class I (C) catalytic domain BEN78_16755 PF00109 Beta-ketoacyl synthase, N-terminal domain BEN78_16755 PF02801 Beta-ketoacyl synthase, C-terminal domain BEN78_16760 PF00550 Phosphopantetheine attachment site BEN78_16770 PF00698 Acyl transferase domain BEN78_16780 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BEN78_16780 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BEN78_16785 PF01783 Ribosomal L32p protein family BEN78_16790 PF02620 Large ribosomal RNA subunit accumulation protein YceD BEN78_16795 PF02545 Maf-like protein BEN78_16825 PF17755 UvrA DNA-binding domain BEN78_16830 PF00487 Fatty acid desaturase BEN78_16835 PF00111 2Fe-2S iron-sulfur cluster binding domain BEN78_16835 PF00970 Oxidoreductase FAD-binding domain BEN78_16835 PF00175 Oxidoreductase NAD-binding domain BEN78_16840 PF00440 Bacterial regulatory proteins, tetR family BEN78_16850 PF00111 2Fe-2S iron-sulfur cluster binding domain BEN78_16850 PF01799 [2Fe-2S] binding domain BEN78_16860 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BEN78_16860 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain