BEN78_00035 SM01092 CO dehydrogenase flavoprotein C-terminal domain BEN78_00040 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BEN78_00130 SM00028 Tetratricopeptide repeats BEN78_00130 SM00267 diguanylate cyclase BEN78_00150 SM01322 BEN78_00150 BEN78_00175 SM00855 Phosphoglycerate mutase family BEN78_00200 SM00052 Putative diguanylate phosphodiesterase BEN78_00215 SM00965 Secretin and TonB N terminus short domain BEN78_00235 SM00788 Adenylosuccinate synthetase BEN78_00245 SM00244 prohibitin homologues BEN78_00250 SM00244 prohibitin homologues BEN78_00290 SM01103 BEN78_00290 BEN78_00300 SM00257 Lysin motif BEN78_00320 SM00463 Small MutS-related domain BEN78_00325 SM00382 ATPases associated with a variety of cellular activities BEN78_00325 SM00464 Found in ATP-dependent protease La (LON) BEN78_00330 SM00382 ATPases associated with a variety of cellular activities BEN78_00330 SM00994 ClpX C4-type zinc finger BEN78_00330 SM01086 C-terminal, D2-small domain, of ClpB protein BEN78_00390 SM01329 BEN78_00390 BEN78_00410 SM00448 cheY-homologous receiver domain BEN78_00410 SM00862 Transcriptional regulatory protein, C terminal BEN78_00415 SM00387 Histidine kinase-like ATPases BEN78_00415 SM00388 His Kinase A (phosphoacceptor) domain BEN78_00435 SM00014 Acid phosphatase homologues BEN78_00445 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BEN78_00445 SM00387 Histidine kinase-like ATPases BEN78_00445 SM00388 His Kinase A (phosphoacceptor) domain BEN78_00450 SM00448 cheY-homologous receiver domain BEN78_00450 SM00862 Transcriptional regulatory protein, C terminal BEN78_00465 SM00487 DEAD-like helicases superfamily BEN78_00465 SM00490 helicase superfamily c-terminal domain BEN78_00465 SM00982 BEN78_00465 BEN78_00465 SM01058 CarD-like/TRCF domain BEN78_00470 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BEN78_00505 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BEN78_00515 SM00972 Spore Coat Protein U domain BEN78_00520 SM00972 Spore Coat Protein U domain BEN78_00535 SM00972 Spore Coat Protein U domain BEN78_00580 SM00411 bacterial (prokaryotic) histone like domain BEN78_00585 SM00316 Ribosomal protein S1-like RNA-binding domain BEN78_00680 SM00316 Ribosomal protein S1-like RNA-binding domain BEN78_00690 SM00421 helix_turn_helix, Lux Regulon BEN78_00690 SM00448 cheY-homologous receiver domain BEN78_00705 SM00382 ATPases associated with a variety of cellular activities BEN78_00805 SM00244 prohibitin homologues BEN78_00840 SM00421 helix_turn_helix, Lux Regulon BEN78_00840 SM00448 cheY-homologous receiver domain BEN78_00920 SM01060 BEN78_00920 BEN78_00925 SM00052 Putative diguanylate phosphodiesterase BEN78_00925 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BEN78_00925 SM00091 PAS domain BEN78_00925 SM00267 diguanylate cyclase BEN78_01005 SM00481 DNA polymerase alpha chain like domain BEN78_01025 SM00977 TilS substrate C-terminal domain BEN78_01075 SM00316 Ribosomal protein S1-like RNA-binding domain BEN78_01110 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BEN78_01120 SM00382 ATPases associated with a variety of cellular activities BEN78_01150 SM01192 BEN78_01150 BEN78_01150 SM01193 BEN78_01150 BEN78_01175 SM00387 Histidine kinase-like ATPases BEN78_01175 SM00433 TopoisomeraseII BEN78_01195 SM00354 helix_turn _helix lactose operon repressor BEN78_01265 SM00420 helix_turn_helix, Deoxyribose operon repressor BEN78_01265 SM01134 BEN78_01265 BEN78_01285 SM00422 helix_turn_helix, mercury resistance BEN78_01315 SM00382 ATPases associated with a variety of cellular activities BEN78_01345 SM00345 helix_turn_helix gluconate operon transcriptional repressor BEN78_01345 SM00895 BEN78_01345 BEN78_01370 SM00822 BEN78_01370 BEN78_01410 SM00656 BEN78_01410 BEN78_01445 SM00633 Glycosyl hydrolase family 10 BEN78_01460 SM00633 Glycosyl hydrolase family 10 BEN78_01470 SM00363 S4 RNA-binding domain BEN78_01475 SM00090 RIO-like kinase BEN78_01490 SM00342 helix_turn_helix, arabinose operon control protein BEN78_01495 SM00822 BEN78_01495 BEN78_01500 SM00862 Transcriptional regulatory protein, C terminal BEN78_01520 SM00530 Helix-turn-helix XRE-family like proteins BEN78_01530 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BEN78_01530 SM00387 Histidine kinase-like ATPases BEN78_01530 SM00388 His Kinase A (phosphoacceptor) domain BEN78_01535 SM00448 cheY-homologous receiver domain BEN78_01535 SM00862 Transcriptional regulatory protein, C terminal BEN78_01570 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BEN78_01585 SM00354 helix_turn _helix lactose operon repressor BEN78_01615 SM00530 Helix-turn-helix XRE-family like proteins BEN78_01650 SM00382 ATPases associated with a variety of cellular activities BEN78_01650 SM00962 SRP54-type protein, GTPase domain BEN78_01650 SM00963 SRP54-type protein, helical bundle domain BEN78_01660 SM00478 endonuclease III BEN78_01705 SM00507 HNH nucleases BEN78_01710 SM00861 Transketolase, pyrimidine binding domain BEN78_01740 SM00422 helix_turn_helix, mercury resistance BEN78_01745 SM00411 bacterial (prokaryotic) histone like domain BEN78_01775 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BEN78_01780 SM00354 helix_turn _helix lactose operon repressor BEN78_01825 SM00100 Cyclic nucleotide-monophosphate binding domain BEN78_01825 SM00419 helix_turn_helix, cAMP Regulatory protein BEN78_01830 SM00729 Elongator protein 3, MiaB family, Radical SAM BEN78_01835 SM00642 Alpha-amylase domain BEN78_01845 SM00642 Alpha-amylase domain BEN78_01850 SM00642 Alpha-amylase domain BEN78_01855 SM00822 BEN78_01855 BEN78_01920 SM00382 ATPases associated with a variety of cellular activities BEN78_01935 SM01001 AIR carboxylase BEN78_01985 SM00729 Elongator protein 3, MiaB family, Radical SAM BEN78_01995 SM00382 ATPases associated with a variety of cellular activities BEN78_02030 SM00116 Domain in cystathionine beta-synthase and other proteins. BEN78_02030 SM01091 Transporter associated domain BEN78_02100 SM00448 cheY-homologous receiver domain BEN78_02100 SM00862 Transcriptional regulatory protein, C terminal BEN78_02105 SM00387 Histidine kinase-like ATPases BEN78_02105 SM00388 His Kinase A (phosphoacceptor) domain BEN78_02160 SM00411 bacterial (prokaryotic) histone like domain BEN78_02190 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain BEN78_02205 SM00382 ATPases associated with a variety of cellular activities BEN78_02285 SM00244 prohibitin homologues BEN78_02370 SM00996 S-adenosyl-L-homocysteine hydrolase BEN78_02370 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BEN78_02415 SM00387 Histidine kinase-like ATPases BEN78_02415 SM00388 His Kinase A (phosphoacceptor) domain BEN78_02420 SM00448 cheY-homologous receiver domain BEN78_02420 SM00862 Transcriptional regulatory protein, C terminal BEN78_02440 SM00869 Autotransporter beta-domain BEN78_02490 SM00967 RNA 2'-O ribose methyltransferase substrate binding BEN78_02525 SM00506 Appr-1"-p processing enzyme BEN78_02560 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BEN78_02575 SM00849 Metallo-beta-lactamase superfamily BEN78_02595 SM00382 ATPases associated with a variety of cellular activities BEN78_02605 SM00903 Flavin reductase like domain BEN78_02635 SM00861 Transketolase, pyrimidine binding domain BEN78_02645 SM00341 Helicase and RNase D C-terminal BEN78_02645 SM00487 DEAD-like helicases superfamily BEN78_02645 SM00490 helicase superfamily c-terminal domain BEN78_02645 SM00956 BEN78_02645 BEN78_02670 SM00448 cheY-homologous receiver domain BEN78_02670 SM00862 Transcriptional regulatory protein, C terminal BEN78_02675 SM00487 DEAD-like helicases superfamily BEN78_02675 SM00490 helicase superfamily c-terminal domain BEN78_02740 SM00382 ATPases associated with a variety of cellular activities BEN78_02785 SM00267 diguanylate cyclase BEN78_02785 SM00448 cheY-homologous receiver domain BEN78_02795 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BEN78_02815 SM00342 helix_turn_helix, arabinose operon control protein BEN78_02840 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BEN78_02865 SM00834 Putative regulatory protein BEN78_02885 SM00382 ATPases associated with a variety of cellular activities BEN78_02905 SM00382 ATPases associated with a variety of cellular activities BEN78_02905 SM01086 C-terminal, D2-small domain, of ClpB protein BEN78_02995 SM00247 Beta/gamma crystallins BEN78_03030 SM00257 Lysin motif BEN78_03050 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BEN78_03050 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BEN78_03050 SM00493 BEN78_03050 BEN78_03110 SM00354 helix_turn _helix lactose operon repressor BEN78_03235 SM00528 Domain in histone-like proteins of HNS family BEN78_03250 SM00382 ATPases associated with a variety of cellular activities BEN78_03270 SM00882 Coenzyme A transferase BEN78_03275 SM00882 Coenzyme A transferase BEN78_03310 SM00893 Electron transfer flavoprotein domain BEN78_03315 SM00893 Electron transfer flavoprotein domain BEN78_03335 SM00382 ATPases associated with a variety of cellular activities BEN78_03350 SM00116 Domain in cystathionine beta-synthase and other proteins. BEN78_03370 SM00382 ATPases associated with a variety of cellular activities BEN78_03415 SM00100 Cyclic nucleotide-monophosphate binding domain BEN78_03415 SM00419 helix_turn_helix, cAMP Regulatory protein BEN78_03470 SM00271 DnaJ molecular chaperone homology domain BEN78_03540 SM00347 helix_turn_helix multiple antibiotic resistance protein BEN78_03605 SM00849 Metallo-beta-lactamase superfamily BEN78_03675 SM00387 Histidine kinase-like ATPases BEN78_03680 SM00448 cheY-homologous receiver domain BEN78_03680 SM00862 Transcriptional regulatory protein, C terminal BEN78_03700 SM00642 Alpha-amylase domain BEN78_03710 SM00642 Alpha-amylase domain BEN78_03720 SM00642 Alpha-amylase domain BEN78_03725 SM00642 Alpha-amylase domain BEN78_03765 SM00798 AICARFT/IMPCHase bienzyme BEN78_03765 SM00851 MGS-like domain BEN78_03775 SM01209 BEN78_03775 BEN78_03775 SM01210 BEN78_03775 BEN78_03790 SM00563 Phosphate acyltransferases BEN78_03825 SM00052 Putative diguanylate phosphodiesterase BEN78_03825 SM00267 diguanylate cyclase BEN78_03825 SM00448 cheY-homologous receiver domain BEN78_03830 SM00073 Histidine Phosphotransfer domain BEN78_03830 SM00387 Histidine kinase-like ATPases BEN78_03830 SM00388 His Kinase A (phosphoacceptor) domain BEN78_03830 SM00448 cheY-homologous receiver domain BEN78_03895 SM00448 cheY-homologous receiver domain BEN78_03895 SM00850 LytTr DNA-binding domain BEN78_03975 SM00382 ATPases associated with a variety of cellular activities BEN78_04020 SM00382 ATPases associated with a variety of cellular activities BEN78_04020 SM00448 cheY-homologous receiver domain BEN78_04025 SM00387 Histidine kinase-like ATPases BEN78_04070 SM00382 ATPases associated with a variety of cellular activities BEN78_04120 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BEN78_04170 SM00829 Enoylreductase BEN78_04200 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BEN78_04220 SM00825 Beta-ketoacyl synthase BEN78_04245 SM00382 ATPases associated with a variety of cellular activities BEN78_04280 SM00244 prohibitin homologues BEN78_04360 SM00448 cheY-homologous receiver domain BEN78_04360 SM00862 Transcriptional regulatory protein, C terminal BEN78_04365 SM00387 Histidine kinase-like ATPases BEN78_04365 SM00388 His Kinase A (phosphoacceptor) domain BEN78_04400 SM00470 ParB-like nuclease domain BEN78_04480 SM00345 helix_turn_helix gluconate operon transcriptional repressor BEN78_04485 SM00345 helix_turn_helix gluconate operon transcriptional repressor BEN78_04525 SM00387 Histidine kinase-like ATPases BEN78_04535 SM00387 Histidine kinase-like ATPases BEN78_04535 SM00388 His Kinase A (phosphoacceptor) domain BEN78_04540 SM00448 cheY-homologous receiver domain BEN78_04545 SM00448 cheY-homologous receiver domain BEN78_04550 SM00919 Malic enzyme, NAD binding domain BEN78_04550 SM01274 BEN78_04550 BEN78_04575 SM00387 Histidine kinase-like ATPases BEN78_04575 SM00388 His Kinase A (phosphoacceptor) domain BEN78_04580 SM00671 Sel1-like repeats. BEN78_04585 SM00421 helix_turn_helix, Lux Regulon BEN78_04585 SM00448 cheY-homologous receiver domain BEN78_04590 SM00267 diguanylate cyclase BEN78_04595 SM01154 BEN78_04595 BEN78_04665 SM00849 Metallo-beta-lactamase superfamily BEN78_04700 SM00354 helix_turn _helix lactose operon repressor BEN78_04740 SM00267 diguanylate cyclase BEN78_04765 SM00849 Metallo-beta-lactamase superfamily BEN78_04785 SM00905 Dihydroneopterin aldolase BEN78_04910 SM00450 Rhodanese Homology Domain BEN78_04915 SM00267 diguanylate cyclase BEN78_04920 SM00091 PAS domain BEN78_04920 SM00387 Histidine kinase-like ATPases BEN78_04920 SM00388 His Kinase A (phosphoacceptor) domain BEN78_04920 SM00448 cheY-homologous receiver domain BEN78_04945 SM00226 Low molecular weight phosphatase family BEN78_04975 SM00984 UDP binding domain BEN78_05060 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BEN78_05060 SM00245 tail specific protease BEN78_05090 SM00530 Helix-turn-helix XRE-family like proteins BEN78_05100 SM00460 Transglutaminase/protease-like homologues BEN78_05130 SM00530 Helix-turn-helix XRE-family like proteins BEN78_05165 SM00460 Transglutaminase/protease-like homologues BEN78_05235 SM00881 CoA binding domain BEN78_05240 SM00986 Uracil DNA glycosylase superfamily BEN78_05240 SM00987 UreE urease accessory protein, C-terminal domain BEN78_05340 SM00464 Found in ATP-dependent protease La (LON) BEN78_05360 SM00859 Semialdehyde dehydrogenase, NAD binding domain BEN78_05385 SM00346 helix_turn_helix isocitrate lyase regulation BEN78_05405 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BEN78_05405 SM00091 PAS domain BEN78_05405 SM00267 diguanylate cyclase BEN78_05410 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BEN78_05410 SM01232 BEN78_05410 BEN78_05485 SM00382 ATPases associated with a variety of cellular activities BEN78_05530 SM00387 Histidine kinase-like ATPases BEN78_05530 SM00388 His Kinase A (phosphoacceptor) domain BEN78_05535 SM00421 helix_turn_helix, Lux Regulon BEN78_05535 SM00448 cheY-homologous receiver domain BEN78_05585 SM00563 Phosphate acyltransferases BEN78_05590 SM00220 Serine/Threonine protein kinases, catalytic domain BEN78_05610 SM00382 ATPases associated with a variety of cellular activities BEN78_05685 SM00836 DALR anticodon binding domain BEN78_05720 SM00850 LytTr DNA-binding domain BEN78_05845 SM00529 Helix-turn-helix diphteria tox regulatory element BEN78_05850 SM00382 ATPases associated with a variety of cellular activities BEN78_05850 SM00930 BEN78_05850 BEN78_05870 SM00248 ankyrin repeats BEN78_05915 SM00450 Rhodanese Homology Domain BEN78_05920 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BEN78_05935 SM00422 helix_turn_helix, mercury resistance BEN78_05965 SM00448 cheY-homologous receiver domain BEN78_05965 SM00862 Transcriptional regulatory protein, C terminal BEN78_05970 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BEN78_05970 SM00387 Histidine kinase-like ATPases BEN78_05970 SM00388 His Kinase A (phosphoacceptor) domain BEN78_05990 SM00530 Helix-turn-helix XRE-family like proteins BEN78_06010 SM00345 helix_turn_helix gluconate operon transcriptional repressor BEN78_06035 SM00822 BEN78_06035 BEN78_06075 SM00487 DEAD-like helicases superfamily BEN78_06075 SM00490 helicase superfamily c-terminal domain BEN78_06135 SM00836 DALR anticodon binding domain BEN78_06135 SM01016 Arginyl tRNA synthetase N terminal dom BEN78_06150 SM00822 BEN78_06150 BEN78_06185 SM00938 Nitrogen regulatory protein P-II BEN78_06195 SM00382 ATPases associated with a variety of cellular activities BEN78_06215 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen BEN78_06225 SM01217 BEN78_06225 BEN78_06235 SM00644 BEN78_06235 BEN78_06260 SM00387 Histidine kinase-like ATPases BEN78_06260 SM00388 His Kinase A (phosphoacceptor) domain BEN78_06265 SM00448 cheY-homologous receiver domain BEN78_06265 SM00862 Transcriptional regulatory protein, C terminal BEN78_06275 SM00938 Nitrogen regulatory protein P-II BEN78_06285 SM01230 BEN78_06285 BEN78_06290 SM00344 helix_turn_helix ASNC type BEN78_06305 SM00829 Enoylreductase BEN78_06310 SM00421 helix_turn_helix, Lux Regulon BEN78_06310 SM00448 cheY-homologous receiver domain BEN78_06350 SM00448 cheY-homologous receiver domain BEN78_06355 SM00387 Histidine kinase-like ATPases BEN78_06365 SM00729 Elongator protein 3, MiaB family, Radical SAM BEN78_06370 SM00155 Phospholipase D. Active site motifs. BEN78_06420 SM00387 Histidine kinase-like ATPases BEN78_06420 SM00433 TopoisomeraseII BEN78_06430 SM00480 DNA polymerase III beta subunit BEN78_06470 SM00382 ATPases associated with a variety of cellular activities BEN78_06480 SM00530 Helix-turn-helix XRE-family like proteins BEN78_06500 SM00382 ATPases associated with a variety of cellular activities BEN78_06530 SM00563 Phosphate acyltransferases BEN78_06585 SM00342 helix_turn_helix, arabinose operon control protein BEN78_06610 SM00248 ankyrin repeats BEN78_06620 SM00116 Domain in cystathionine beta-synthase and other proteins. BEN78_06620 SM00924 MgtE intracellular N domain BEN78_06625 SM01060 BEN78_06625 BEN78_06650 SM00387 Histidine kinase-like ATPases BEN78_06710 SM00387 Histidine kinase-like ATPases BEN78_06710 SM00388 His Kinase A (phosphoacceptor) domain BEN78_06715 SM00382 ATPases associated with a variety of cellular activities BEN78_06715 SM00448 cheY-homologous receiver domain BEN78_06775 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BEN78_06830 SM00450 Rhodanese Homology Domain BEN78_06845 SM00028 Tetratricopeptide repeats BEN78_06845 SM00862 Transcriptional regulatory protein, C terminal BEN78_06890 SM00487 DEAD-like helicases superfamily BEN78_06890 SM00490 helicase superfamily c-terminal domain BEN78_06890 SM00847 Helicase associated domain (HA2) Add an annotation BEN78_06970 SM00382 ATPases associated with a variety of cellular activities BEN78_07060 SM00344 helix_turn_helix ASNC type BEN78_07125 SM00829 Enoylreductase BEN78_07150 SM00729 Elongator protein 3, MiaB family, Radical SAM BEN78_07150 SM00876 Biotin and Thiamin Synthesis associated domain BEN78_07180 SM00342 helix_turn_helix, arabinose operon control protein BEN78_07210 SM01228 BEN78_07210 BEN78_07220 SM00530 Helix-turn-helix XRE-family like proteins BEN78_07245 SM00382 ATPases associated with a variety of cellular activities BEN78_07255 SM00387 Histidine kinase-like ATPases BEN78_07255 SM00388 His Kinase A (phosphoacceptor) domain BEN78_07255 SM00448 cheY-homologous receiver domain BEN78_07315 SM00257 Lysin motif BEN78_07385 SM00014 Acid phosphatase homologues BEN78_07450 SM00530 Helix-turn-helix XRE-family like proteins BEN78_07485 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BEN78_07485 SM00245 tail specific protease BEN78_07530 SM00855 Phosphoglycerate mutase family BEN78_07535 SM00867 YceI-like domain BEN78_07540 SM00155 Phospholipase D. Active site motifs. BEN78_07550 SM00563 Phosphate acyltransferases BEN78_07560 SM00028 Tetratricopeptide repeats BEN78_07615 SM00400 zinc finger BEN78_07615 SM00493 BEN78_07615 BEN78_07615 SM00766 DNA primase DnaG DnaB-binding BEN78_07635 SM00491 BEN78_07635 BEN78_07650 SM00822 BEN78_07650 BEN78_07670 SM00091 PAS domain BEN78_07670 SM00387 Histidine kinase-like ATPases BEN78_07670 SM00388 His Kinase A (phosphoacceptor) domain BEN78_07670 SM00448 cheY-homologous receiver domain BEN78_07715 SM00749 bacterial OsmY and nodulation domain BEN78_07745 SM00267 diguanylate cyclase BEN78_07775 SM00986 Uracil DNA glycosylase superfamily BEN78_07775 SM00987 UreE urease accessory protein, C-terminal domain BEN78_07785 SM00345 helix_turn_helix gluconate operon transcriptional repressor BEN78_07840 SM01004 Delta-aminolevulinic acid dehydratase BEN78_07855 SM01294 BEN78_07855 BEN78_07865 SM00563 Phosphate acyltransferases BEN78_07895 SM00822 BEN78_07895 BEN78_07925 SM00825 Beta-ketoacyl synthase BEN78_07970 SM00354 helix_turn _helix lactose operon repressor BEN78_07980 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BEN78_08070 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BEN78_08070 SM00474 3'-5' exonuclease BEN78_08070 SM00475 5'-3' exonuclease BEN78_08070 SM00482 DNA polymerase A domain BEN78_08110 SM00248 ankyrin repeats BEN78_08125 SM00953 BEN78_08125 BEN78_08140 SM00155 Phospholipase D. Active site motifs. BEN78_08175 SM00530 Helix-turn-helix XRE-family like proteins BEN78_08180 SM00528 Domain in histone-like proteins of HNS family BEN78_08205 SM00387 Histidine kinase-like ATPases BEN78_08205 SM00388 His Kinase A (phosphoacceptor) domain BEN78_08210 SM00448 cheY-homologous receiver domain BEN78_08210 SM00862 Transcriptional regulatory protein, C terminal BEN78_08215 SM00829 Enoylreductase BEN78_08220 SM00862 Transcriptional regulatory protein, C terminal BEN78_08225 SM00421 helix_turn_helix, Lux Regulon BEN78_08225 SM00448 cheY-homologous receiver domain BEN78_08305 SM01240 BEN78_08305 BEN78_08325 SM00867 YceI-like domain BEN78_08420 SM00387 Histidine kinase-like ATPases BEN78_08420 SM00388 His Kinase A (phosphoacceptor) domain BEN78_08455 SM00966 SpoVT / AbrB like domain BEN78_08465 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BEN78_08470 SM01329 BEN78_08470 BEN78_08485 SM00917 LeuA allosteric (dimerisation) domain BEN78_08520 SM00749 bacterial OsmY and nodulation domain BEN78_08550 SM00862 Transcriptional regulatory protein, C terminal BEN78_08555 SM00342 helix_turn_helix, arabinose operon control protein BEN78_08590 SM00382 ATPases associated with a variety of cellular activities BEN78_08620 SM00421 helix_turn_helix, Lux Regulon BEN78_08620 SM00448 cheY-homologous receiver domain BEN78_08640 SM00857 Resolvase, N terminal domain BEN78_08690 SM00869 Autotransporter beta-domain BEN78_08700 SM00869 Autotransporter beta-domain BEN78_08710 SM00357 Cold shock protein domain BEN78_08710 SM00382 ATPases associated with a variety of cellular activities BEN78_08710 SM00959 Rho termination factor, N-terminal domain BEN78_08725 SM00382 ATPases associated with a variety of cellular activities BEN78_08735 SM00986 Uracil DNA glycosylase superfamily BEN78_08735 SM00987 UreE urease accessory protein, C-terminal domain BEN78_08800 SM00382 ATPases associated with a variety of cellular activities BEN78_08800 SM01086 C-terminal, D2-small domain, of ClpB protein BEN78_08830 SM00116 Domain in cystathionine beta-synthase and other proteins. BEN78_08830 SM01091 Transporter associated domain BEN78_08845 SM01263 BEN78_08845 BEN78_08870 SM00267 diguanylate cyclase BEN78_08925 SM00936 Penicillin-binding protein 5, C-terminal domain BEN78_08935 SM01034 Sensors of blue-light using FAD BEN78_08945 SM00729 Elongator protein 3, MiaB family, Radical SAM BEN78_08950 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BEN78_08950 SM00245 tail specific protease BEN78_08985 SM00382 ATPases associated with a variety of cellular activities BEN78_08995 SM00382 ATPases associated with a variety of cellular activities BEN78_09005 SM00387 Histidine kinase-like ATPases BEN78_09010 SM00421 helix_turn_helix, Lux Regulon BEN78_09010 SM00448 cheY-homologous receiver domain BEN78_09050 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BEN78_09060 SM00448 cheY-homologous receiver domain BEN78_09060 SM00862 Transcriptional regulatory protein, C terminal BEN78_09065 SM00267 diguanylate cyclase BEN78_09135 SM00054 EF-hand, calcium binding motif BEN78_09160 SM00878 Biotin carboxylase C-terminal domain BEN78_09200 SM00883 Chaperonin 10 Kd subunit BEN78_09305 SM01211 BEN78_09305 BEN78_09335 SM00382 ATPases associated with a variety of cellular activities BEN78_09430 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BEN78_09445 SM00382 ATPases associated with a variety of cellular activities BEN78_09580 SM00842 Cell division protein FtsA BEN78_09585 SM00864 Tubulin/FtsZ family, GTPase domain BEN78_09585 SM00865 Tubulin/FtsZ family, C-terminal domain BEN78_09605 SM00957 SecA DEAD-like domain BEN78_09605 SM00958 SecA preprotein cross-linking domain BEN78_09630 SM00382 ATPases associated with a variety of cellular activities BEN78_09640 SM00857 Resolvase, N terminal domain BEN78_09675 SM00869 Autotransporter beta-domain BEN78_09685 SM00869 Autotransporter beta-domain BEN78_09690 SM00869 Autotransporter beta-domain BEN78_09710 SM00388 His Kinase A (phosphoacceptor) domain BEN78_09715 SM00028 Tetratricopeptide repeats BEN78_09715 SM00267 diguanylate cyclase BEN78_09720 SM00382 ATPases associated with a variety of cellular activities BEN78_09720 SM00448 cheY-homologous receiver domain BEN78_09725 SM00387 Histidine kinase-like ATPases BEN78_09725 SM00388 His Kinase A (phosphoacceptor) domain BEN78_09735 SM00881 CoA binding domain BEN78_09800 SM00052 Putative diguanylate phosphodiesterase BEN78_09800 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BEN78_09800 SM00091 PAS domain BEN78_09800 SM00267 diguanylate cyclase BEN78_09810 SM01011 Aminopeptidase P, N-terminal domain BEN78_09820 SM00729 Elongator protein 3, MiaB family, Radical SAM BEN78_09840 SM00965 Secretin and TonB N terminus short domain BEN78_09865 SM00072 Guanylate kinase homologues. BEN78_09870 SM01409 BEN78_09870 BEN78_09875 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BEN78_09875 SM00954 Region found in RelA / SpoT proteins BEN78_09885 SM00487 DEAD-like helicases superfamily BEN78_09885 SM00490 helicase superfamily c-terminal domain BEN78_09890 SM00421 helix_turn_helix, Lux Regulon BEN78_09890 SM00448 cheY-homologous receiver domain BEN78_09955 SM00965 Secretin and TonB N terminus short domain BEN78_09960 SM00382 ATPases associated with a variety of cellular activities BEN78_09975 SM00327 von Willebrand factor (vWF) type A domain BEN78_10000 SM00382 ATPases associated with a variety of cellular activities BEN78_10000 SM00487 DEAD-like helicases superfamily BEN78_10000 SM00490 helicase superfamily c-terminal domain BEN78_10000 SM00847 Helicase associated domain (HA2) Add an annotation BEN78_10005 SM01321 BEN78_10005 BEN78_10015 SM00954 Region found in RelA / SpoT proteins BEN78_10040 SM00491 BEN78_10040 BEN78_10070 SM00448 cheY-homologous receiver domain BEN78_10075 SM00448 cheY-homologous receiver domain BEN78_10080 SM00260 Two component signalling adaptor domain BEN78_10085 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BEN78_10090 SM00073 Histidine Phosphotransfer domain BEN78_10090 SM00260 Two component signalling adaptor domain BEN78_10090 SM00387 Histidine kinase-like ATPases BEN78_10090 SM00448 cheY-homologous receiver domain BEN78_10090 SM01231 BEN78_10090 BEN78_10105 SM00260 Two component signalling adaptor domain BEN78_10145 SM00448 cheY-homologous receiver domain BEN78_10145 SM00862 Transcriptional regulatory protein, C terminal BEN78_10150 SM00387 Histidine kinase-like ATPases BEN78_10150 SM00388 His Kinase A (phosphoacceptor) domain BEN78_10165 SM00382 ATPases associated with a variety of cellular activities BEN78_10185 SM00257 Lysin motif BEN78_10240 SM00650 Ribosomal RNA adenine dimethylases BEN78_10330 SM00267 diguanylate cyclase BEN78_10385 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BEN78_10385 SM00475 5'-3' exonuclease BEN78_10430 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BEN78_10430 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BEN78_10475 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BEN78_10635 SM00867 YceI-like domain BEN78_10640 SM00867 YceI-like domain BEN78_10645 SM00387 Histidine kinase-like ATPases BEN78_10645 SM00388 His Kinase A (phosphoacceptor) domain BEN78_10645 SM00448 cheY-homologous receiver domain BEN78_10660 SM00487 DEAD-like helicases superfamily BEN78_10660 SM00490 helicase superfamily c-terminal domain BEN78_10740 SM00382 ATPases associated with a variety of cellular activities BEN78_10785 SM00732 Likely ribonuclease with RNase H fold. BEN78_10805 SM00357 Cold shock protein domain BEN78_10810 SM00116 Domain in cystathionine beta-synthase and other proteins. BEN78_10810 SM00924 MgtE intracellular N domain BEN78_10855 SM00382 ATPases associated with a variety of cellular activities BEN78_10875 SM00116 Domain in cystathionine beta-synthase and other proteins. BEN78_10930 SM00382 ATPases associated with a variety of cellular activities BEN78_10935 SM00852 Probable molybdopterin binding domain BEN78_10940 SM00937 BEN78_10940 BEN78_10950 SM00028 Tetratricopeptide repeats BEN78_10970 SM01400 BEN78_10970 BEN78_11025 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BEN78_11025 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BEN78_11030 SM00649 Ribosomal protein L11/L12 BEN78_11055 SM00663 RNA polymerase I subunit A N-terminus BEN78_11070 SM00838 Elongation factor G C-terminus BEN78_11070 SM00889 Elongation factor G, domain IV BEN78_11080 SM01403 BEN78_11080 BEN78_11100 SM01382 BEN78_11100 BEN78_11100 SM01383 BEN78_11100 BEN78_11115 SM00322 K homology RNA-binding domain BEN78_11135 SM01374 BEN78_11135 BEN78_11140 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BEN78_11200 SM00363 S4 RNA-binding domain BEN78_11200 SM01390 BEN78_11200 BEN78_11205 SM00662 RNA polymerases D BEN78_11310 SM00829 Enoylreductase BEN78_11340 SM00363 S4 RNA-binding domain BEN78_11355 SM00829 Enoylreductase BEN78_11370 SM00855 Phosphoglycerate mutase family BEN78_11405 SM01260 BEN78_11405 BEN78_11465 SM00342 helix_turn_helix, arabinose operon control protein BEN78_11465 SM00478 endonuclease III BEN78_11465 SM01009 AlkA N-terminal domain BEN78_11545 SM00487 DEAD-like helicases superfamily BEN78_11545 SM00490 helicase superfamily c-terminal domain BEN78_11575 SM00382 ATPases associated with a variety of cellular activities BEN78_11580 SM00829 Enoylreductase BEN78_11585 SM00422 helix_turn_helix, mercury resistance BEN78_11605 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BEN78_11615 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BEN78_11615 SM00267 diguanylate cyclase BEN78_11700 SM00487 DEAD-like helicases superfamily BEN78_11700 SM00490 helicase superfamily c-terminal domain BEN78_11720 SM00642 Alpha-amylase domain BEN78_11775 SM00344 helix_turn_helix ASNC type BEN78_11795 SM01323 BEN78_11795 BEN78_11825 SM00116 Domain in cystathionine beta-synthase and other proteins. BEN78_11825 SM01091 Transporter associated domain BEN78_11870 SM00487 DEAD-like helicases superfamily BEN78_11870 SM00490 helicase superfamily c-terminal domain BEN78_11890 SM00257 Lysin motif BEN78_11900 SM00098 Alkaline phosphatase homologues BEN78_11905 SM00448 cheY-homologous receiver domain BEN78_11905 SM00862 Transcriptional regulatory protein, C terminal BEN78_11910 SM00387 Histidine kinase-like ATPases BEN78_11950 SM00220 Serine/Threonine protein kinases, catalytic domain BEN78_11975 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BEN78_11975 SM00267 diguanylate cyclase BEN78_12010 SM00984 UDP binding domain BEN78_12030 SM00530 Helix-turn-helix XRE-family like proteins BEN78_12035 SM00670 Large family of predicted nucleotide-binding domains BEN78_12050 SM01130 BEN78_12050 BEN78_12115 SM00646 BEN78_12115 BEN78_12120 SM00853 MutL C terminal dimerisation domain BEN78_12120 SM01340 BEN78_12120 BEN78_12190 SM00434 DNA Topoisomerase IV BEN78_12195 SM00100 Cyclic nucleotide-monophosphate binding domain BEN78_12195 SM00419 helix_turn_helix, cAMP Regulatory protein BEN78_12200 SM00091 PAS domain BEN78_12200 SM00138 Methyltransferase, chemotaxis proteins BEN78_12200 SM00387 Histidine kinase-like ATPases BEN78_12200 SM00388 His Kinase A (phosphoacceptor) domain BEN78_12200 SM00448 cheY-homologous receiver domain BEN78_12235 SM00967 RNA 2'-O ribose methyltransferase substrate binding BEN78_12255 SM00479 BEN78_12255 BEN78_12265 SM00382 ATPases associated with a variety of cellular activities BEN78_12300 SM00478 endonuclease III BEN78_12300 SM00525 BEN78_12300 BEN78_12370 SM00904 Riboflavin kinase BEN78_12415 SM00267 diguanylate cyclase BEN78_12420 SM00382 ATPases associated with a variety of cellular activities BEN78_12445 SM00347 helix_turn_helix multiple antibiotic resistance protein BEN78_12460 SM00382 ATPases associated with a variety of cellular activities BEN78_12460 SM00962 SRP54-type protein, GTPase domain BEN78_12460 SM00963 SRP54-type protein, helical bundle domain BEN78_12505 SM00448 cheY-homologous receiver domain BEN78_12505 SM00862 Transcriptional regulatory protein, C terminal BEN78_12510 SM00387 Histidine kinase-like ATPases BEN78_12515 SM00363 S4 RNA-binding domain BEN78_12535 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BEN78_12535 SM00534 ATPase domain of DNA mismatch repair MUTS family BEN78_12605 SM00729 Elongator protein 3, MiaB family, Radical SAM BEN78_12635 SM00257 Lysin motif BEN78_12670 SM00859 Semialdehyde dehydrogenase, NAD binding domain BEN78_12765 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BEN78_12770 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BEN78_12845 SM00316 Ribosomal protein S1-like RNA-binding domain BEN78_12845 SM00322 K homology RNA-binding domain BEN78_12865 SM01387 BEN78_12865 BEN78_12870 SM00316 Ribosomal protein S1-like RNA-binding domain BEN78_12870 SM00322 K homology RNA-binding domain BEN78_12880 SM00382 ATPases associated with a variety of cellular activities BEN78_12900 SM00054 EF-hand, calcium binding motif BEN78_12920 SM00644 BEN78_12920 BEN78_12945 SM00981 BEN78_12945 BEN78_12960 SM00986 Uracil DNA glycosylase superfamily BEN78_12960 SM00987 UreE urease accessory protein, C-terminal domain BEN78_12965 SM00257 Lysin motif BEN78_12975 SM00849 Metallo-beta-lactamase superfamily BEN78_12990 SM00382 ATPases associated with a variety of cellular activities BEN78_13025 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BEN78_13025 SM00465 GIY-YIG type nucleases (URI domain) BEN78_13055 SM00267 diguanylate cyclase BEN78_13075 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BEN78_13110 SM00411 bacterial (prokaryotic) histone like domain BEN78_13120 SM00257 Lysin motif BEN78_13125 SM00849 Metallo-beta-lactamase superfamily BEN78_13140 SM00479 BEN78_13140 BEN78_13150 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BEN78_13150 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BEN78_13150 SM00091 PAS domain BEN78_13150 SM00911 HWE histidine kinase BEN78_13155 SM00448 cheY-homologous receiver domain BEN78_13165 SM00382 ATPases associated with a variety of cellular activities BEN78_13165 SM00448 cheY-homologous receiver domain BEN78_13195 SM00729 Elongator protein 3, MiaB family, Radical SAM BEN78_13265 SM00382 ATPases associated with a variety of cellular activities BEN78_13275 SM00493 BEN78_13275 BEN78_13290 SM00460 Transglutaminase/protease-like homologues BEN78_13315 SM00363 S4 RNA-binding domain BEN78_13330 SM00354 helix_turn _helix lactose operon repressor BEN78_13365 SM01217 BEN78_13365 BEN78_13390 SM00900 BEN78_13390 BEN78_13395 SM00710 Parallel beta-helix repeats BEN78_13395 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses BEN78_13400 SM00382 ATPases associated with a variety of cellular activities BEN78_13450 SM00382 ATPases associated with a variety of cellular activities BEN78_13455 SM00968 SMC proteins Flexible Hinge Domain BEN78_13460 SM00771 ZipA, C-terminal domain (FtsZ-binding) BEN78_13485 SM00434 DNA Topoisomerase IV BEN78_13530 SM00271 DnaJ molecular chaperone homology domain BEN78_13565 SM00861 Transketolase, pyrimidine binding domain BEN78_13575 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BEN78_13620 SM00382 ATPases associated with a variety of cellular activities BEN78_13625 SM00345 helix_turn_helix gluconate operon transcriptional repressor BEN78_13670 SM01018 B12 binding domain BEN78_13680 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BEN78_13710 SM00841 Elongation factor P, C-terminal BEN78_13710 SM01185 BEN78_13710 BEN78_13720 SM00822 BEN78_13720 BEN78_13725 SM00899 BEN78_13725 BEN78_13770 SM00869 Autotransporter beta-domain BEN78_13775 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BEN78_13780 SM00155 Phospholipase D. Active site motifs. BEN78_13830 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BEN78_13835 SM00838 Elongation factor G C-terminus BEN78_13850 SM00358 Double-stranded RNA binding motif BEN78_13850 SM00535 Ribonuclease III family BEN78_13870 SM00448 cheY-homologous receiver domain BEN78_13890 SM01118 BEN78_13890 BEN78_13915 SM00357 Cold shock protein domain BEN78_13925 SM00822 BEN78_13925 BEN78_13940 SM00345 helix_turn_helix gluconate operon transcriptional repressor BEN78_13940 SM00895 BEN78_13940 BEN78_13970 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BEN78_14015 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BEN78_14025 SM00382 ATPases associated with a variety of cellular activities BEN78_14045 SM00052 Putative diguanylate phosphodiesterase BEN78_14045 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BEN78_14045 SM00267 diguanylate cyclase BEN78_14080 SM00240 Forkhead associated domain BEN78_14105 SM00830 Chorismate mutase type II BEN78_14165 SM00091 PAS domain BEN78_14165 SM00387 Histidine kinase-like ATPases BEN78_14165 SM00388 His Kinase A (phosphoacceptor) domain BEN78_14165 SM01079 BEN78_14165 BEN78_14215 SM00271 DnaJ molecular chaperone homology domain BEN78_14225 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BEN78_14235 SM00851 MGS-like domain BEN78_14235 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BEN78_14260 SM00937 BEN78_14260 BEN78_14270 SM00448 cheY-homologous receiver domain BEN78_14270 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BEN78_14275 SM00073 Histidine Phosphotransfer domain BEN78_14275 SM00387 Histidine kinase-like ATPases BEN78_14275 SM00388 His Kinase A (phosphoacceptor) domain BEN78_14275 SM00448 cheY-homologous receiver domain BEN78_14310 SM00382 ATPases associated with a variety of cellular activities BEN78_14325 SM00966 SpoVT / AbrB like domain BEN78_14355 SM00448 cheY-homologous receiver domain BEN78_14365 SM00138 Methyltransferase, chemotaxis proteins BEN78_14380 SM00260 Two component signalling adaptor domain BEN78_14390 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BEN78_14390 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BEN78_14390 SM01049 BEN78_14390 BEN78_14395 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BEN78_14395 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BEN78_14405 SM00448 cheY-homologous receiver domain BEN78_14415 SM00260 Two component signalling adaptor domain BEN78_14435 SM00073 Histidine Phosphotransfer domain BEN78_14435 SM00260 Two component signalling adaptor domain BEN78_14435 SM00387 Histidine kinase-like ATPases BEN78_14435 SM01231 BEN78_14435 BEN78_14445 SM00448 cheY-homologous receiver domain BEN78_14460 SM00382 ATPases associated with a variety of cellular activities BEN78_14460 SM00962 SRP54-type protein, GTPase domain BEN78_14520 SM00382 ATPases associated with a variety of cellular activities BEN78_14545 SM00382 ATPases associated with a variety of cellular activities BEN78_14550 SM00448 cheY-homologous receiver domain BEN78_14560 SM00421 helix_turn_helix, Lux Regulon BEN78_14560 SM00448 cheY-homologous receiver domain BEN78_14590 SM00530 Helix-turn-helix XRE-family like proteins BEN78_14605 SM00047 Lysozyme subfamily 2 BEN78_14650 SM00260 Two component signalling adaptor domain BEN78_14650 SM00448 cheY-homologous receiver domain BEN78_14655 SM00858 BEN78_14655 BEN78_14670 SM00387 Histidine kinase-like ATPases BEN78_14675 SM00052 Putative diguanylate phosphodiesterase BEN78_14675 SM00267 diguanylate cyclase BEN78_14675 SM00448 cheY-homologous receiver domain BEN78_14680 SM00387 Histidine kinase-like ATPases BEN78_14685 SM00052 Putative diguanylate phosphodiesterase BEN78_14685 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BEN78_14685 SM00267 diguanylate cyclase BEN78_14720 SM00382 ATPases associated with a variety of cellular activities BEN78_14720 SM01086 C-terminal, D2-small domain, of ClpB protein BEN78_14725 SM00316 Ribosomal protein S1-like RNA-binding domain BEN78_14750 SM00382 ATPases associated with a variety of cellular activities BEN78_14750 SM00843 BEN78_14750 BEN78_14790 SM00530 Helix-turn-helix XRE-family like proteins BEN78_14850 SM00052 Putative diguanylate phosphodiesterase BEN78_14850 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BEN78_14850 SM00267 diguanylate cyclase BEN78_14880 SM00479 BEN78_14880 BEN78_14890 SM00530 Helix-turn-helix XRE-family like proteins BEN78_14900 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BEN78_14980 SM00861 Transketolase, pyrimidine binding domain BEN78_15015 SM00878 Biotin carboxylase C-terminal domain BEN78_15115 SM00342 helix_turn_helix, arabinose operon control protein BEN78_15125 SM00530 Helix-turn-helix XRE-family like proteins BEN78_15135 SM00849 Metallo-beta-lactamase superfamily BEN78_15165 SM00345 helix_turn_helix gluconate operon transcriptional repressor BEN78_15190 SM00530 Helix-turn-helix XRE-family like proteins BEN78_15220 SM00487 DEAD-like helicases superfamily BEN78_15220 SM00490 helicase superfamily c-terminal domain BEN78_15225 SM00487 DEAD-like helicases superfamily BEN78_15225 SM00490 helicase superfamily c-terminal domain BEN78_15240 SM00116 Domain in cystathionine beta-synthase and other proteins. BEN78_15240 SM01240 BEN78_15240 BEN78_15270 SM00450 Rhodanese Homology Domain BEN78_15275 SM00852 Probable molybdopterin binding domain BEN78_15295 SM00564 beta-propeller repeat BEN78_15310 SM00028 Tetratricopeptide repeats BEN78_15320 SM00562 BEN78_15320 BEN78_15370 SM01234 BEN78_15370 BEN78_15390 SM00869 Autotransporter beta-domain BEN78_15425 SM00841 Elongation factor P, C-terminal BEN78_15425 SM01185 BEN78_15425 BEN78_15435 SM00052 Putative diguanylate phosphodiesterase BEN78_15435 SM00267 diguanylate cyclase BEN78_15450 SM00822 BEN78_15450 BEN78_15460 SM00822 BEN78_15460 BEN78_15475 SM00474 3'-5' exonuclease BEN78_15510 SM00481 DNA polymerase alpha chain like domain BEN78_15555 SM00382 ATPases associated with a variety of cellular activities BEN78_15605 SM00861 Transketolase, pyrimidine binding domain BEN78_15660 SM00357 Cold shock protein domain BEN78_15715 SM00382 ATPases associated with a variety of cellular activities BEN78_15750 SM00357 Cold shock protein domain BEN78_15770 SM00631 BEN78_15770 BEN78_15860 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BEN78_15860 SM01232 BEN78_15860 BEN78_15870 SM00947 Carbonic anhydrase BEN78_15905 SM00479 BEN78_15905 BEN78_15920 SM00014 Acid phosphatase homologues BEN78_15930 SM00387 Histidine kinase-like ATPases BEN78_15935 SM00448 cheY-homologous receiver domain BEN78_15960 SM01154 BEN78_15960 BEN78_15980 SM00100 Cyclic nucleotide-monophosphate binding domain BEN78_15980 SM00419 helix_turn_helix, cAMP Regulatory protein BEN78_16150 SM00342 helix_turn_helix, arabinose operon control protein BEN78_16200 SM00420 helix_turn_helix, Deoxyribose operon repressor BEN78_16200 SM01134 BEN78_16200 BEN78_16295 SM00507 HNH nucleases BEN78_16345 SM01144 BEN78_16345 BEN78_16350 SM00344 helix_turn_helix ASNC type BEN78_16360 SM01005 Alanine racemase, C-terminal domain BEN78_16370 SM00382 ATPases associated with a variety of cellular activities BEN78_16395 SM00487 DEAD-like helicases superfamily BEN78_16395 SM00490 helicase superfamily c-terminal domain BEN78_16410 SM00450 Rhodanese Homology Domain BEN78_16450 SM00347 helix_turn_helix multiple antibiotic resistance protein BEN78_16520 SM00060 Fibronectin type 3 domain BEN78_16520 SM00495 Chitin-binding domain type 3 BEN78_16520 SM00636 BEN78_16520 BEN78_16555 SM01007 Class II Aldolase and Adducin N-terminal domain BEN78_16635 SM00028 Tetratricopeptide repeats BEN78_16665 SM00382 ATPases associated with a variety of cellular activities BEN78_16705 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BEN78_16720 SM00859 Semialdehyde dehydrogenase, NAD binding domain BEN78_16750 SM00840 BEN78_16750 BEN78_16755 SM00825 Beta-ketoacyl synthase BEN78_16765 SM00822 BEN78_16765 BEN78_16770 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BEN78_16860 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain