BEN78_01345 0ed8018c99270f9fc1726c32378373ec 247 Gene3D G3DSA:1.10.10.10 1 77 3.4E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_01345 0ed8018c99270f9fc1726c32378373ec 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 3.5E-10 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN78_01345 0ed8018c99270f9fc1726c32378373ec 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 3.5E-10 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN78_01345 0ed8018c99270f9fc1726c32378373ec 247 SMART SM00895 87 213 3.7E-26 T 13-10-2018 IPR011711 GntR, C-terminal BEN78_01345 0ed8018c99270f9fc1726c32378373ec 247 SUPERFAMILY SSF48008 85 221 4.97E-28 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal BEN78_01345 0ed8018c99270f9fc1726c32378373ec 247 Pfam PF07729 FCD domain 87 213 2.5E-27 T 13-10-2018 IPR011711 GntR, C-terminal BEN78_01345 0ed8018c99270f9fc1726c32378373ec 247 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 69 5.7E-21 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN78_01345 0ed8018c99270f9fc1726c32378373ec 247 SMART SM00345 10 69 6.2E-23 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN78_01345 0ed8018c99270f9fc1726c32378373ec 247 SUPERFAMILY SSF46785 3 73 9.09E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_01345 0ed8018c99270f9fc1726c32378373ec 247 Gene3D G3DSA:1.20.120.530 85 229 9.8E-30 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal BEN78_13770 2a6d6f8e4d9fb2ae1ada64527510daa7 936 Pfam PF00082 Subtilase family 78 366 4.2E-36 T 13-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BEN78_13770 2a6d6f8e4d9fb2ae1ada64527510daa7 936 SMART SM00869 670 926 3.4E-18 T 13-10-2018 IPR005546 Autotransporter beta-domain BEN78_13770 2a6d6f8e4d9fb2ae1ada64527510daa7 936 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 316 326 - T 13-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site BEN78_13770 2a6d6f8e4d9fb2ae1ada64527510daa7 936 PRINTS PR00723 Subtilisin serine protease family (S8) signature 78 97 1.2E-14 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN78_13770 2a6d6f8e4d9fb2ae1ada64527510daa7 936 PRINTS PR00723 Subtilisin serine protease family (S8) signature 315 331 1.2E-14 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN78_13770 2a6d6f8e4d9fb2ae1ada64527510daa7 936 PRINTS PR00723 Subtilisin serine protease family (S8) signature 119 132 1.2E-14 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN78_13770 2a6d6f8e4d9fb2ae1ada64527510daa7 936 Gene3D G3DSA:3.40.50.200 50 376 4.6E-59 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BEN78_13770 2a6d6f8e4d9fb2ae1ada64527510daa7 936 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 404 434 3.2E-6 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_13770 2a6d6f8e4d9fb2ae1ada64527510daa7 936 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 83 94 - T 13-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site BEN78_13770 2a6d6f8e4d9fb2ae1ada64527510daa7 936 SUPERFAMILY SSF103515 635 936 3.4E-31 T 13-10-2018 IPR036709 Autotransporter beta-domain superfamily BEN78_13770 2a6d6f8e4d9fb2ae1ada64527510daa7 936 SUPERFAMILY SSF52743 59 377 6.41E-55 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BEN78_13770 2a6d6f8e4d9fb2ae1ada64527510daa7 936 Gene3D G3DSA:2.40.128.130 626 936 2.9E-33 T 13-10-2018 IPR036709 Autotransporter beta-domain superfamily BEN78_13770 2a6d6f8e4d9fb2ae1ada64527510daa7 936 Pfam PF03797 Autotransporter beta-domain 670 915 8.0E-27 T 13-10-2018 IPR005546 Autotransporter beta-domain BEN78_05165 64e9c4b1b19c50ac2ebad4b27db6814e 264 Gene3D G3DSA:2.60.40.2250 16 246 4.4E-70 T 13-10-2018 BEN78_05165 64e9c4b1b19c50ac2ebad4b27db6814e 264 Gene3D G3DSA:3.10.620.30 78 241 4.4E-70 T 13-10-2018 BEN78_05165 64e9c4b1b19c50ac2ebad4b27db6814e 264 SMART SM00460 161 221 2.7E-14 T 13-10-2018 IPR002931 Transglutaminase-like BEN78_05165 64e9c4b1b19c50ac2ebad4b27db6814e 264 SUPERFAMILY SSF54001 49 247 2.8E-36 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BEN78_05165 64e9c4b1b19c50ac2ebad4b27db6814e 264 Pfam PF01841 Transglutaminase-like superfamily 120 219 5.1E-24 T 13-10-2018 IPR002931 Transglutaminase-like BEN78_06910 995bb2c1e8ebd52ca2b4188525286d14 755 SUPERFAMILY SSF55957 664 754 1.27E-20 T 13-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN78_06910 995bb2c1e8ebd52ca2b4188525286d14 755 SUPERFAMILY SSF53738 450 549 3.49E-31 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN78_06910 995bb2c1e8ebd52ca2b4188525286d14 755 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 392 406 3.3E-22 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN78_06910 995bb2c1e8ebd52ca2b4188525286d14 755 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 465 484 3.3E-22 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN78_06910 995bb2c1e8ebd52ca2b4188525286d14 755 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 528 543 3.3E-22 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN78_06910 995bb2c1e8ebd52ca2b4188525286d14 755 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 499 512 3.3E-22 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN78_06910 995bb2c1e8ebd52ca2b4188525286d14 755 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 687 742 9.0E-11 T 13-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN78_06910 995bb2c1e8ebd52ca2b4188525286d14 755 Gene3D G3DSA:3.40.120.10 467 544 2.1E-32 T 13-10-2018 BEN78_06910 995bb2c1e8ebd52ca2b4188525286d14 755 Gene3D G3DSA:3.40.120.10 294 438 5.6E-48 T 13-10-2018 BEN78_06910 995bb2c1e8ebd52ca2b4188525286d14 755 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 451 548 2.3E-27 T 13-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN78_06910 995bb2c1e8ebd52ca2b4188525286d14 755 SUPERFAMILY SSF53738 552 653 1.81E-31 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN78_06910 995bb2c1e8ebd52ca2b4188525286d14 755 SUPERFAMILY SSF53738 301 439 1.84E-37 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN78_06910 995bb2c1e8ebd52ca2b4188525286d14 755 Gene3D G3DSA:3.40.120.10 546 661 2.0E-39 T 13-10-2018 BEN78_06910 995bb2c1e8ebd52ca2b4188525286d14 755 Gene3D G3DSA:3.30.310.50 663 755 3.3E-24 T 13-10-2018 BEN78_06910 995bb2c1e8ebd52ca2b4188525286d14 755 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 304 432 4.4E-33 T 13-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN78_06910 995bb2c1e8ebd52ca2b4188525286d14 755 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 553 654 7.1E-21 T 13-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN78_01375 78d626b7771c11bc9edefa5c8b06081a 393 SUPERFAMILY SSF52266 182 384 6.72E-39 T 13-10-2018 BEN78_01375 78d626b7771c11bc9edefa5c8b06081a 393 Gene3D G3DSA:3.40.50.1110 166 387 1.5E-36 T 13-10-2018 IPR036514 SGNH hydrolase superfamily BEN78_01375 78d626b7771c11bc9edefa5c8b06081a 393 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 188 378 2.3E-26 T 13-10-2018 IPR013830 SGNH hydrolase-type esterase domain BEN78_14185 3f6a8ffa85dac59d57c839d2c100d020 127 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 1 121 29.39 T 13-10-2018 IPR026592 Outer membrane protein assembly factor BamE BEN78_14185 3f6a8ffa85dac59d57c839d2c100d020 127 Pfam PF04355 SmpA / OmlA family 28 98 5.8E-22 T 13-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 BEN78_14185 3f6a8ffa85dac59d57c839d2c100d020 127 Gene3D G3DSA:3.30.1450.10 34 110 2.1E-29 T 13-10-2018 IPR037873 BamE-like BEN78_14275 5807c61110b4ba50ecd8d51cd4bd94c9 710 SMART SM00387 303 419 2.7E-36 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_14275 5807c61110b4ba50ecd8d51cd4bd94c9 710 SMART SM00448 451 566 1.6E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_14275 5807c61110b4ba50ecd8d51cd4bd94c9 710 Pfam PF00072 Response regulator receiver domain 453 566 3.9E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_14275 5807c61110b4ba50ecd8d51cd4bd94c9 710 SMART SM00073 599 697 1.6E-5 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BEN78_14275 5807c61110b4ba50ecd8d51cd4bd94c9 710 PRINTS PR00344 Bacterial sensor protein C-terminal signature 344 358 6.9E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_14275 5807c61110b4ba50ecd8d51cd4bd94c9 710 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 397 6.9E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_14275 5807c61110b4ba50ecd8d51cd4bd94c9 710 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 372 6.9E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_14275 5807c61110b4ba50ecd8d51cd4bd94c9 710 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 416 6.9E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_14275 5807c61110b4ba50ecd8d51cd4bd94c9 710 SMART SM00388 191 256 8.6E-24 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_14275 5807c61110b4ba50ecd8d51cd4bd94c9 710 SUPERFAMILY SSF47226 591 693 3.27E-12 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 BEN78_14275 5807c61110b4ba50ecd8d51cd4bd94c9 710 Pfam PF00512 His Kinase A (phospho-acceptor) domain 191 256 1.7E-17 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_14275 5807c61110b4ba50ecd8d51cd4bd94c9 710 Gene3D G3DSA:1.10.287.130 170 254 8.9E-25 T 13-10-2018 BEN78_14275 5807c61110b4ba50ecd8d51cd4bd94c9 710 Gene3D G3DSA:3.40.50.2300 437 571 8.7E-37 T 13-10-2018 BEN78_14275 5807c61110b4ba50ecd8d51cd4bd94c9 710 SUPERFAMILY SSF55874 245 417 2.23E-42 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_14275 5807c61110b4ba50ecd8d51cd4bd94c9 710 Gene3D G3DSA:3.30.565.10 255 420 9.4E-49 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_14275 5807c61110b4ba50ecd8d51cd4bd94c9 710 Pfam PF01627 Hpt domain 608 694 9.5E-7 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BEN78_14275 5807c61110b4ba50ecd8d51cd4bd94c9 710 SUPERFAMILY SSF52172 450 572 5.55E-35 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_14275 5807c61110b4ba50ecd8d51cd4bd94c9 710 Gene3D G3DSA:1.20.120.160 585 694 3.8E-11 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 BEN78_14275 5807c61110b4ba50ecd8d51cd4bd94c9 710 SUPERFAMILY SSF47384 174 257 2.75E-20 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN78_14275 5807c61110b4ba50ecd8d51cd4bd94c9 710 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 303 417 1.7E-28 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_10030 bde9b7dd53632079254352f8d4cf97d9 828 Gene3D G3DSA:3.30.2060.10 72 159 1.3E-216 T 13-10-2018 BEN78_10030 bde9b7dd53632079254352f8d4cf97d9 828 SUPERFAMILY SSF56601 323 757 3.38E-90 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BEN78_10030 bde9b7dd53632079254352f8d4cf97d9 828 Pfam PF00912 Transglycosylase 162 341 2.7E-54 T 13-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN78_10030 bde9b7dd53632079254352f8d4cf97d9 828 Pfam PF14814 Bifunctional transglycosylase second domain 74 156 1.1E-15 T 13-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN78_10030 bde9b7dd53632079254352f8d4cf97d9 828 Gene3D G3DSA:1.10.3810.10 160 365 1.3E-216 T 13-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN78_10030 bde9b7dd53632079254352f8d4cf97d9 828 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 29 753 1.4E-260 T 13-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN78_10030 bde9b7dd53632079254352f8d4cf97d9 828 Pfam PF00905 Penicillin binding protein transpeptidase domain 436 684 9.5E-14 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BEN78_10030 bde9b7dd53632079254352f8d4cf97d9 828 Gene3D G3DSA:3.40.710.10 64 717 1.3E-216 T 13-10-2018 BEN78_10030 bde9b7dd53632079254352f8d4cf97d9 828 SUPERFAMILY SSF53955 161 369 4.22E-59 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily BEN78_10030 bde9b7dd53632079254352f8d4cf97d9 828 PIRSF PIRSF002799 6 794 1.1E-256 T 13-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN78_10125 676ef3463d164e84dab30ad502595fb5 271 SUPERFAMILY SSF56655 13 264 1.11E-71 T 13-10-2018 BEN78_10125 676ef3463d164e84dab30ad502595fb5 271 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 12 262 40.625 T 13-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 BEN78_10125 676ef3463d164e84dab30ad502595fb5 271 Gene3D G3DSA:3.30.540.10 9 160 8.4E-41 T 13-10-2018 BEN78_10125 676ef3463d164e84dab30ad502595fb5 271 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 16 260 3.4E-87 T 13-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 BEN78_10125 676ef3463d164e84dab30ad502595fb5 271 Gene3D G3DSA:3.40.190.80 162 263 1.1E-31 T 13-10-2018 BEN78_10125 676ef3463d164e84dab30ad502595fb5 271 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 91 104 - T 13-10-2018 IPR020583 Inositol monophosphatase, metal-binding site BEN78_10125 676ef3463d164e84dab30ad502595fb5 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 66 82 1.4E-10 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BEN78_10125 676ef3463d164e84dab30ad502595fb5 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 44 64 1.4E-10 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BEN78_10125 676ef3463d164e84dab30ad502595fb5 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 91 107 1.4E-10 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BEN78_10125 676ef3463d164e84dab30ad502595fb5 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 217 241 1.4E-10 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BEN78_10125 676ef3463d164e84dab30ad502595fb5 271 Pfam PF00459 Inositol monophosphatase family 12 252 2.5E-47 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BEN78_00295 066c73d576539dfb1895b8f9acf5bead 127 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 21 120 2.5E-24 T 13-10-2018 IPR007523 NDUFAF3/Mth938 domain-containing protein BEN78_00295 066c73d576539dfb1895b8f9acf5bead 127 SUPERFAMILY SSF64076 2 122 3.4E-30 T 13-10-2018 IPR036748 MTH938-like superfamily BEN78_00295 066c73d576539dfb1895b8f9acf5bead 127 Gene3D G3DSA:3.40.1230.10 2 126 3.1E-30 T 13-10-2018 IPR036748 MTH938-like superfamily BEN78_11835 4a354593949009a523c881e980e6c182 375 Pfam PF01384 Phosphate transporter family 19 362 2.1E-85 T 13-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 BEN78_02505 d6346e7007cb23702355ff4a71ea5fb0 1044 SUPERFAMILY SSF82714 182 265 3.66E-20 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN78_02505 d6346e7007cb23702355ff4a71ea5fb0 1044 SUPERFAMILY SSF82693 40 134 3.66E-25 T 13-10-2018 BEN78_02505 d6346e7007cb23702355ff4a71ea5fb0 1044 Gene3D G3DSA:3.30.70.1430 561 662 0.0 T 13-10-2018 BEN78_02505 d6346e7007cb23702355ff4a71ea5fb0 1044 SUPERFAMILY SSF82714 712 795 6.41E-21 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN78_02505 d6346e7007cb23702355ff4a71ea5fb0 1044 SUPERFAMILY SSF82693 559 663 4.08E-15 T 13-10-2018 BEN78_02505 d6346e7007cb23702355ff4a71ea5fb0 1044 SUPERFAMILY SSF82866 292 490 1.03E-45 T 13-10-2018 BEN78_02505 d6346e7007cb23702355ff4a71ea5fb0 1044 Gene3D G3DSA:1.20.1640.10 10 501 0.0 T 13-10-2018 BEN78_02505 d6346e7007cb23702355ff4a71ea5fb0 1044 Gene3D G3DSA:3.30.2090.10 711 799 0.0 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN78_02505 d6346e7007cb23702355ff4a71ea5fb0 1044 Gene3D G3DSA:3.30.70.1320 134 326 0.0 T 13-10-2018 BEN78_02505 d6346e7007cb23702355ff4a71ea5fb0 1044 Gene3D G3DSA:3.30.70.1440 663 856 0.0 T 13-10-2018 BEN78_02505 d6346e7007cb23702355ff4a71ea5fb0 1044 Gene3D G3DSA:1.20.1640.10 502 1013 0.0 T 13-10-2018 BEN78_02505 d6346e7007cb23702355ff4a71ea5fb0 1044 Gene3D G3DSA:3.30.70.1430 40 807 0.0 T 13-10-2018 BEN78_02505 d6346e7007cb23702355ff4a71ea5fb0 1044 Pfam PF00873 AcrB/AcrD/AcrF family 4 1016 6.5E-301 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_02505 d6346e7007cb23702355ff4a71ea5fb0 1044 PRINTS PR00702 Acriflavin resistance protein family signature 618 632 4.0E-78 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_02505 d6346e7007cb23702355ff4a71ea5fb0 1044 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 4.0E-78 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_02505 d6346e7007cb23702355ff4a71ea5fb0 1044 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 4.0E-78 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_02505 d6346e7007cb23702355ff4a71ea5fb0 1044 PRINTS PR00702 Acriflavin resistance protein family signature 546 563 4.0E-78 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_02505 d6346e7007cb23702355ff4a71ea5fb0 1044 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 4.0E-78 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_02505 d6346e7007cb23702355ff4a71ea5fb0 1044 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 4.0E-78 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_02505 d6346e7007cb23702355ff4a71ea5fb0 1044 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 4.0E-78 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_02505 d6346e7007cb23702355ff4a71ea5fb0 1044 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 4.0E-78 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_02505 d6346e7007cb23702355ff4a71ea5fb0 1044 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 4.0E-78 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_02505 d6346e7007cb23702355ff4a71ea5fb0 1044 SUPERFAMILY SSF82866 798 1019 2.62E-51 T 13-10-2018 BEN78_02505 d6346e7007cb23702355ff4a71ea5fb0 1044 Gene3D G3DSA:3.30.2090.10 178 269 0.0 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN78_02505 d6346e7007cb23702355ff4a71ea5fb0 1044 SUPERFAMILY SSF82693 137 324 3.14E-22 T 13-10-2018 BEN78_07260 9ef87dba6a7078fb983094843bb84266 180 Pfam PF00849 RNA pseudouridylate synthase 2 149 8.2E-15 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN78_07260 9ef87dba6a7078fb983094843bb84266 180 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 39 53 - T 13-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 BEN78_07260 9ef87dba6a7078fb983094843bb84266 180 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 6 176 8.6E-52 T 13-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 BEN78_07260 9ef87dba6a7078fb983094843bb84266 180 Gene3D G3DSA:3.30.70.1560 68 168 6.6E-42 T 13-10-2018 BEN78_07260 9ef87dba6a7078fb983094843bb84266 180 SUPERFAMILY SSF55120 2 177 4.48E-40 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN78_07260 9ef87dba6a7078fb983094843bb84266 180 Gene3D G3DSA:3.30.70.580 1 67 4.0E-22 T 13-10-2018 BEN78_01570 34086829b802a9a2722c1dd5d779e616 417 Pfam PF13378 Enolase C-terminal domain-like 201 392 2.3E-35 T 13-10-2018 IPR029065 Enolase C-terminal domain-like BEN78_01570 34086829b802a9a2722c1dd5d779e616 417 SUPERFAMILY SSF51604 113 400 1.63E-65 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily BEN78_01570 34086829b802a9a2722c1dd5d779e616 417 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 100 125 - T 13-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 BEN78_01570 34086829b802a9a2722c1dd5d779e616 417 Gene3D G3DSA:3.30.390.10 20 413 5.2E-163 T 13-10-2018 IPR029017 Enolase-like, N-terminal BEN78_01570 34086829b802a9a2722c1dd5d779e616 417 SUPERFAMILY SSF54826 19 127 6.46E-31 T 13-10-2018 BEN78_01570 34086829b802a9a2722c1dd5d779e616 417 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 28 125 4.7E-30 T 13-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain BEN78_01570 34086829b802a9a2722c1dd5d779e616 417 Gene3D G3DSA:3.20.20.120 120 382 5.2E-163 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily BEN78_01570 34086829b802a9a2722c1dd5d779e616 417 SMART SM00922 143 272 1.3E-10 T 13-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal BEN78_14235 edb35d9b354f93604199742c3b85ff3d 1094 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 428 548 1.7E-39 T 13-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN78_14235 edb35d9b354f93604199742c3b85ff3d 1094 SUPERFAMILY SSF52335 947 1078 7.2E-40 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily BEN78_14235 edb35d9b354f93604199742c3b85ff3d 1094 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 674 882 5.6E-38 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BEN78_14235 edb35d9b354f93604199742c3b85ff3d 1094 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 6.3E-71 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BEN78_14235 edb35d9b354f93604199742c3b85ff3d 1094 Gene3D G3DSA:3.40.50.1380 945 1080 4.1E-40 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily BEN78_14235 edb35d9b354f93604199742c3b85ff3d 1094 Pfam PF02142 MGS-like domain 964 1049 1.5E-19 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain BEN78_14235 edb35d9b354f93604199742c3b85ff3d 1094 SUPERFAMILY SSF48108 397 554 6.93E-51 T 13-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN78_14235 edb35d9b354f93604199742c3b85ff3d 1094 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1069 13.319 T 13-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN78_14235 edb35d9b354f93604199742c3b85ff3d 1094 SUPERFAMILY SSF52440 558 676 9.93E-50 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BEN78_14235 edb35d9b354f93604199742c3b85ff3d 1094 Gene3D G3DSA:3.30.470.20 119 403 1.1E-127 T 13-10-2018 BEN78_14235 edb35d9b354f93604199742c3b85ff3d 1094 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 4.5E-65 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN78_14235 edb35d9b354f93604199742c3b85ff3d 1094 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 4.5E-65 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN78_14235 edb35d9b354f93604199742c3b85ff3d 1094 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 4.5E-65 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN78_14235 edb35d9b354f93604199742c3b85ff3d 1094 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 4.5E-65 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN78_14235 edb35d9b354f93604199742c3b85ff3d 1094 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 4.5E-65 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN78_14235 edb35d9b354f93604199742c3b85ff3d 1094 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 4.5E-65 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN78_14235 edb35d9b354f93604199742c3b85ff3d 1094 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 4.5E-65 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN78_14235 edb35d9b354f93604199742c3b85ff3d 1094 SUPERFAMILY SSF52440 1 127 2.73E-49 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BEN78_14235 edb35d9b354f93604199742c3b85ff3d 1094 Gene3D G3DSA:1.10.1030.10 404 554 5.9E-48 T 13-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN78_14235 edb35d9b354f93604199742c3b85ff3d 1094 Gene3D G3DSA:3.40.50.20 1 116 6.6E-50 T 13-10-2018 BEN78_14235 edb35d9b354f93604199742c3b85ff3d 1094 SMART SM00851 963 1049 2.2E-33 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain BEN78_14235 edb35d9b354f93604199742c3b85ff3d 1094 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1059 0.0 T 13-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN78_14235 edb35d9b354f93604199742c3b85ff3d 1094 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 710 724 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BEN78_14235 edb35d9b354f93604199742c3b85ff3d 1094 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1075 13.528 T 13-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN78_14235 edb35d9b354f93604199742c3b85ff3d 1094 SMART SM01096 425 548 6.7E-75 T 13-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN78_14235 edb35d9b354f93604199742c3b85ff3d 1094 Gene3D G3DSA:3.40.50.20 555 663 9.9E-50 T 13-10-2018 BEN78_14235 edb35d9b354f93604199742c3b85ff3d 1094 SUPERFAMILY SSF56059 674 940 1.94E-100 T 13-10-2018 BEN78_14235 edb35d9b354f93604199742c3b85ff3d 1094 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 845 852 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BEN78_14235 edb35d9b354f93604199742c3b85ff3d 1094 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BEN78_14235 edb35d9b354f93604199742c3b85ff3d 1094 Gene3D G3DSA:3.30.470.20 666 942 3.5E-112 T 13-10-2018 BEN78_14235 edb35d9b354f93604199742c3b85ff3d 1094 SUPERFAMILY SSF56059 128 401 2.83E-107 T 13-10-2018 BEN78_14260 678ebaac7f39e62e6be39b4f081a07d7 303 Pfam PF03462 PCRF domain 9 148 1.1E-47 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 BEN78_14260 678ebaac7f39e62e6be39b4f081a07d7 303 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 291 2.9E-139 T 13-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 BEN78_14260 678ebaac7f39e62e6be39b4f081a07d7 303 SMART SM00937 13 123 1.3E-54 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 BEN78_14260 678ebaac7f39e62e6be39b4f081a07d7 303 Gene3D G3DSA:3.30.160.20 154 249 1.0E-97 T 13-10-2018 BEN78_14260 678ebaac7f39e62e6be39b4f081a07d7 303 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 173 189 - T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 BEN78_14260 678ebaac7f39e62e6be39b4f081a07d7 303 SUPERFAMILY SSF75620 4 290 1.31E-120 T 13-10-2018 BEN78_14260 678ebaac7f39e62e6be39b4f081a07d7 303 Pfam PF00472 RF-1 domain 156 265 3.6E-41 T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 BEN78_14260 678ebaac7f39e62e6be39b4f081a07d7 303 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 293 31.66 T 13-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 BEN78_14260 678ebaac7f39e62e6be39b4f081a07d7 303 Gene3D G3DSA:3.30.70.1660 58 286 1.0E-97 T 13-10-2018 BEN78_07670 63df0d25ae2125254e86c5987acdf77e 923 Gene3D G3DSA:1.10.287.130 549 617 2.1E-17 T 13-10-2018 BEN78_07670 63df0d25ae2125254e86c5987acdf77e 923 Gene3D G3DSA:3.40.50.2300 792 922 4.5E-24 T 13-10-2018 BEN78_07670 63df0d25ae2125254e86c5987acdf77e 923 SMART SM00387 660 781 4.8E-24 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_07670 63df0d25ae2125254e86c5987acdf77e 923 SMART SM00388 553 619 2.3E-10 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_07670 63df0d25ae2125254e86c5987acdf77e 923 Pfam PF00072 Response regulator receiver domain 807 911 7.7E-15 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_07670 63df0d25ae2125254e86c5987acdf77e 923 SUPERFAMILY SSF55785 310 412 4.19E-20 T 13-10-2018 IPR035965 PAS domain superfamily BEN78_07670 63df0d25ae2125254e86c5987acdf77e 923 SUPERFAMILY SSF52172 805 916 3.13E-26 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_07670 63df0d25ae2125254e86c5987acdf77e 923 SUPERFAMILY SSF55785 406 529 9.42E-18 T 13-10-2018 IPR035965 PAS domain superfamily BEN78_07670 63df0d25ae2125254e86c5987acdf77e 923 SUPERFAMILY SSF55785 143 270 1.57E-10 T 13-10-2018 IPR035965 PAS domain superfamily BEN78_07670 63df0d25ae2125254e86c5987acdf77e 923 Gene3D G3DSA:3.30.450.20 308 425 1.2E-19 T 13-10-2018 BEN78_07670 63df0d25ae2125254e86c5987acdf77e 923 Gene3D G3DSA:3.30.450.20 429 548 3.0E-24 T 13-10-2018 BEN78_07670 63df0d25ae2125254e86c5987acdf77e 923 Gene3D G3DSA:3.30.450.20 151 286 1.2E-33 T 13-10-2018 BEN78_07670 63df0d25ae2125254e86c5987acdf77e 923 Gene3D G3DSA:3.30.450.20 20 150 2.2E-21 T 13-10-2018 BEN78_07670 63df0d25ae2125254e86c5987acdf77e 923 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 661 779 5.1E-15 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_07670 63df0d25ae2125254e86c5987acdf77e 923 Pfam PF00989 PAS fold 311 393 2.2E-8 T 13-10-2018 IPR013767 PAS fold GO:0006355 BEN78_07670 63df0d25ae2125254e86c5987acdf77e 923 Pfam PF08448 PAS fold 431 539 9.2E-14 T 13-10-2018 IPR013656 PAS fold-4 BEN78_07670 63df0d25ae2125254e86c5987acdf77e 923 Pfam PF08448 PAS fold 160 273 2.0E-9 T 13-10-2018 IPR013656 PAS fold-4 BEN78_07670 63df0d25ae2125254e86c5987acdf77e 923 Pfam PF08448 PAS fold 38 141 8.5E-10 T 13-10-2018 IPR013656 PAS fold-4 BEN78_07670 63df0d25ae2125254e86c5987acdf77e 923 SMART SM00091 27 91 110.0 T 13-10-2018 IPR000014 PAS domain BEN78_07670 63df0d25ae2125254e86c5987acdf77e 923 SMART SM00091 422 488 0.0011 T 13-10-2018 IPR000014 PAS domain BEN78_07670 63df0d25ae2125254e86c5987acdf77e 923 SMART SM00091 154 219 0.03 T 13-10-2018 IPR000014 PAS domain BEN78_07670 63df0d25ae2125254e86c5987acdf77e 923 SMART SM00091 302 368 5.5E-9 T 13-10-2018 IPR000014 PAS domain BEN78_07670 63df0d25ae2125254e86c5987acdf77e 923 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 306 417 3.1E-15 T 13-10-2018 IPR000014 PAS domain BEN78_07670 63df0d25ae2125254e86c5987acdf77e 923 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 419 545 8.8E-10 T 13-10-2018 IPR000014 PAS domain BEN78_07670 63df0d25ae2125254e86c5987acdf77e 923 SUPERFAMILY SSF47384 545 616 1.12E-10 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN78_07670 63df0d25ae2125254e86c5987acdf77e 923 SUPERFAMILY SSF55785 43 135 1.06E-8 T 13-10-2018 IPR035965 PAS domain superfamily BEN78_07670 63df0d25ae2125254e86c5987acdf77e 923 SUPERFAMILY SSF55874 610 779 2.62E-33 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_07670 63df0d25ae2125254e86c5987acdf77e 923 Gene3D G3DSA:3.30.565.10 622 791 2.7E-37 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_07670 63df0d25ae2125254e86c5987acdf77e 923 PRINTS PR00344 Bacterial sensor protein C-terminal signature 728 738 4.3E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_07670 63df0d25ae2125254e86c5987acdf77e 923 PRINTS PR00344 Bacterial sensor protein C-terminal signature 710 724 4.3E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_07670 63df0d25ae2125254e86c5987acdf77e 923 PRINTS PR00344 Bacterial sensor protein C-terminal signature 765 778 4.3E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_07670 63df0d25ae2125254e86c5987acdf77e 923 PRINTS PR00344 Bacterial sensor protein C-terminal signature 741 759 4.3E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_07670 63df0d25ae2125254e86c5987acdf77e 923 Pfam PF00512 His Kinase A (phospho-acceptor) domain 554 617 2.9E-10 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_07670 63df0d25ae2125254e86c5987acdf77e 923 SMART SM00448 804 911 4.2E-19 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_10325 60c072f32141d27f0870b1209d29446b 589 Gene3D G3DSA:3.40.50.620 40 258 1.1E-95 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_10325 60c072f32141d27f0870b1209d29446b 589 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 369 561 3.1E-57 T 13-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BEN78_10325 60c072f32141d27f0870b1209d29446b 589 SUPERFAMILY SSF52374 25 366 7.7E-89 T 13-10-2018 BEN78_10325 60c072f32141d27f0870b1209d29446b 589 Gene3D G3DSA:2.40.240.10 377 495 1.0E-75 T 13-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BEN78_10325 60c072f32141d27f0870b1209d29446b 589 Gene3D G3DSA:2.40.240.10 369 579 1.0E-75 T 13-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BEN78_10325 60c072f32141d27f0870b1209d29446b 589 Gene3D G3DSA:1.10.1160.10 290 368 9.0E-31 T 13-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 BEN78_10325 60c072f32141d27f0870b1209d29446b 589 Gene3D G3DSA:3.90.800.10 112 220 1.1E-95 T 13-10-2018 BEN78_10325 60c072f32141d27f0870b1209d29446b 589 PRINTS PR00987 Glutamyl-tRNA synthetase signature 72 85 2.0E-8 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BEN78_10325 60c072f32141d27f0870b1209d29446b 589 PRINTS PR00987 Glutamyl-tRNA synthetase signature 43 55 2.0E-8 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BEN78_10325 60c072f32141d27f0870b1209d29446b 589 PRINTS PR00987 Glutamyl-tRNA synthetase signature 221 231 2.0E-8 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BEN78_10325 60c072f32141d27f0870b1209d29446b 589 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 46 57 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN78_10325 60c072f32141d27f0870b1209d29446b 589 SUPERFAMILY SSF50715 369 580 6.8E-72 T 13-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BEN78_10325 60c072f32141d27f0870b1209d29446b 589 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 40 583 7.8E-205 T 13-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BEN78_10325 60c072f32141d27f0870b1209d29446b 589 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 7 582 52.66 T 13-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 BEN78_10325 60c072f32141d27f0870b1209d29446b 589 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 40 350 1.9E-92 T 13-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 BEN78_07835 dbf8ba73a10a2284f770c32847aa2d20 821 Pfam PF00082 Subtilase family 207 671 2.2E-42 T 13-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BEN78_07835 dbf8ba73a10a2284f770c32847aa2d20 821 SUPERFAMILY SSF52743 117 694 2.62E-57 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BEN78_07835 dbf8ba73a10a2284f770c32847aa2d20 821 PRINTS PR00723 Subtilisin serine protease family (S8) signature 626 642 5.7E-17 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN78_07835 dbf8ba73a10a2284f770c32847aa2d20 821 PRINTS PR00723 Subtilisin serine protease family (S8) signature 207 226 5.7E-17 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN78_07835 dbf8ba73a10a2284f770c32847aa2d20 821 PRINTS PR00723 Subtilisin serine protease family (S8) signature 292 305 5.7E-17 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN78_07835 dbf8ba73a10a2284f770c32847aa2d20 821 Pfam PF02225 PA domain 482 552 6.1E-11 T 13-10-2018 IPR003137 PA domain BEN78_07835 dbf8ba73a10a2284f770c32847aa2d20 821 Gene3D G3DSA:3.50.30.30 426 573 2.0E-107 T 13-10-2018 BEN78_07835 dbf8ba73a10a2284f770c32847aa2d20 821 Gene3D G3DSA:3.40.50.200 209 704 2.0E-107 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BEN78_07835 dbf8ba73a10a2284f770c32847aa2d20 821 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 627 637 - T 13-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site BEN78_07835 dbf8ba73a10a2284f770c32847aa2d20 821 SUPERFAMILY SSF52025 490 573 4.19E-11 T 13-10-2018 BEN78_07835 dbf8ba73a10a2284f770c32847aa2d20 821 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 296 306 - T 13-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site BEN78_15055 7d1d4afa0cdff9349b992845bde654bd 309 Pfam PF13533 Biotin-lipoyl like 50 98 2.5E-15 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain BEN78_15055 7d1d4afa0cdff9349b992845bde654bd 309 Pfam PF13437 HlyD family secretion protein 158 242 2.9E-10 T 13-10-2018 BEN78_15055 7d1d4afa0cdff9349b992845bde654bd 309 SUPERFAMILY SSF111369 46 185 5.75E-21 T 13-10-2018 BEN78_15055 7d1d4afa0cdff9349b992845bde654bd 309 Gene3D G3DSA:2.40.50.100 49 114 1.9E-9 T 13-10-2018 BEN78_15055 7d1d4afa0cdff9349b992845bde654bd 309 Gene3D G3DSA:2.40.30.170 173 291 1.4E-23 T 13-10-2018 BEN78_08220 1b96d783e8eb280bfdd5d5de442a6452 147 Pfam PF00486 Transcriptional regulatory protein, C terminal 2 66 4.0E-14 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN78_08220 1b96d783e8eb280bfdd5d5de442a6452 147 Gene3D G3DSA:1.10.10.10 1 72 4.2E-15 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_08220 1b96d783e8eb280bfdd5d5de442a6452 147 SMART SM00862 1 66 1.5E-5 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN78_08220 1b96d783e8eb280bfdd5d5de442a6452 147 SUPERFAMILY SSF46894 2 66 5.39E-13 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BEN78_03700 fd89d45d19d6d4982f6100fad2c07a93 732 SUPERFAMILY SSF81296 23 167 1.2E-48 T 13-10-2018 IPR014756 Immunoglobulin E-set BEN78_03700 fd89d45d19d6d4982f6100fad2c07a93 732 Gene3D G3DSA:2.60.40.1180 606 713 3.4E-14 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta BEN78_03700 fd89d45d19d6d4982f6100fad2c07a93 732 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 23 711 0.0 T 13-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 BEN78_03700 fd89d45d19d6d4982f6100fad2c07a93 732 Gene3D G3DSA:3.20.20.80 158 600 4.1E-174 T 13-10-2018 BEN78_03700 fd89d45d19d6d4982f6100fad2c07a93 732 SMART SM00642 198 586 1.5E-6 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BEN78_03700 fd89d45d19d6d4982f6100fad2c07a93 732 Gene3D G3DSA:2.60.40.10 14 157 1.7E-52 T 13-10-2018 IPR013783 Immunoglobulin-like fold BEN78_03700 fd89d45d19d6d4982f6100fad2c07a93 732 Pfam PF00128 Alpha amylase, catalytic domain 209 318 3.5E-8 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BEN78_03700 fd89d45d19d6d4982f6100fad2c07a93 732 SUPERFAMILY SSF51445 155 593 2.41E-127 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily BEN78_03700 fd89d45d19d6d4982f6100fad2c07a93 732 SUPERFAMILY SSF51011 607 712 4.03E-18 T 13-10-2018 BEN78_03700 fd89d45d19d6d4982f6100fad2c07a93 732 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 27 114 1.1E-20 T 13-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 BEN78_09365 42d90a82eb114a891712b3ef939961bd 144 PRINTS PR00813 Bacterial general secretion pathway protein G signature 18 43 3.8E-8 T 13-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 BEN78_09365 42d90a82eb114a891712b3ef939961bd 144 PRINTS PR00813 Bacterial general secretion pathway protein G signature 54 72 3.8E-8 T 13-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 BEN78_09365 42d90a82eb114a891712b3ef939961bd 144 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 17 37 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site BEN78_09365 42d90a82eb114a891712b3ef939961bd 144 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 18 142 3.5E-27 T 13-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 BEN78_09365 42d90a82eb114a891712b3ef939961bd 144 Pfam PF08334 Type II secretion system (T2SS), protein G 42 142 9.4E-27 T 13-10-2018 IPR013545 Type II secretion system protein G BEN78_09365 42d90a82eb114a891712b3ef939961bd 144 Gene3D G3DSA:3.30.700.10 41 143 1.4E-22 T 13-10-2018 BEN78_09365 42d90a82eb114a891712b3ef939961bd 144 SUPERFAMILY SSF54523 46 142 1.78E-22 T 13-10-2018 BEN78_09365 42d90a82eb114a891712b3ef939961bd 144 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 39 1.2E-4 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site BEN78_00850 06ffcb38ae6cf92732c76a73f6b476e3 195 Pfam PF00583 Acetyltransferase (GNAT) family 35 140 9.6E-6 T 13-10-2018 IPR000182 GNAT domain BEN78_00850 06ffcb38ae6cf92732c76a73f6b476e3 195 SUPERFAMILY SSF55729 1 152 8.29E-18 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN78_00850 06ffcb38ae6cf92732c76a73f6b476e3 195 Gene3D G3DSA:3.40.630.30 1 162 1.8E-15 T 13-10-2018 BEN78_00850 06ffcb38ae6cf92732c76a73f6b476e3 195 PIRSF PIRSF028520 1 164 4.9E-68 T 13-10-2018 IPR016890 Uncharacterised conserved protein UCP028520 BEN78_06875 b9130aef0a6019676d230a1cf4c31c6a 298 Pfam PF05726 Pirin C-terminal cupin domain 176 272 5.8E-20 T 13-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 BEN78_06875 b9130aef0a6019676d230a1cf4c31c6a 298 Gene3D G3DSA:2.60.120.10 145 243 2.4E-63 T 13-10-2018 IPR014710 RmlC-like jelly roll fold BEN78_06875 b9130aef0a6019676d230a1cf4c31c6a 298 PIRSF PIRSF006232 1 281 4.1E-81 T 13-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 BEN78_06875 b9130aef0a6019676d230a1cf4c31c6a 298 Gene3D G3DSA:2.60.120.10 14 268 2.4E-63 T 13-10-2018 IPR014710 RmlC-like jelly roll fold BEN78_06875 b9130aef0a6019676d230a1cf4c31c6a 298 SUPERFAMILY SSF51182 10 284 1.78E-69 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily BEN78_06875 b9130aef0a6019676d230a1cf4c31c6a 298 Pfam PF02678 Pirin 18 123 7.7E-32 T 13-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 BEN78_14840 83533a5c873e4a2641da8c509ec70b64 609 Pfam PF00394 Multicopper oxidase 186 364 1.3E-34 T 13-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 BEN78_14840 83533a5c873e4a2641da8c509ec70b64 609 Gene3D G3DSA:2.60.40.420 472 608 2.5E-30 T 13-10-2018 IPR008972 Cupredoxin BEN78_14840 83533a5c873e4a2641da8c509ec70b64 609 SUPERFAMILY SSF49503 180 400 2.6E-56 T 13-10-2018 IPR008972 Cupredoxin BEN78_14840 83533a5c873e4a2641da8c509ec70b64 609 ProSitePatterns PS00079 Multicopper oxidases signature 1. 585 605 - T 13-10-2018 IPR033138 Multicopper oxidases, conserved site BEN78_14840 83533a5c873e4a2641da8c509ec70b64 609 SUPERFAMILY SSF49503 456 607 1.72E-33 T 13-10-2018 IPR008972 Cupredoxin BEN78_14840 83533a5c873e4a2641da8c509ec70b64 609 Gene3D G3DSA:2.60.40.420 51 178 2.5E-34 T 13-10-2018 IPR008972 Cupredoxin BEN78_14840 83533a5c873e4a2641da8c509ec70b64 609 Pfam PF07731 Multicopper oxidase 492 607 1.8E-25 T 13-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 BEN78_14840 83533a5c873e4a2641da8c509ec70b64 609 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 15 607 0.0 T 13-10-2018 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 BEN78_14840 83533a5c873e4a2641da8c509ec70b64 609 SUPERFAMILY SSF49503 55 206 1.93E-36 T 13-10-2018 IPR008972 Cupredoxin BEN78_14840 83533a5c873e4a2641da8c509ec70b64 609 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 16 41 2.1E-5 T 13-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BEN78_14840 83533a5c873e4a2641da8c509ec70b64 609 ProSitePatterns PS00079 Multicopper oxidases signature 1. 151 171 - T 13-10-2018 IPR033138 Multicopper oxidases, conserved site BEN78_14840 83533a5c873e4a2641da8c509ec70b64 609 ProSitePatterns PS00080 Multicopper oxidases signature 2. 590 601 - T 13-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 BEN78_14840 83533a5c873e4a2641da8c509ec70b64 609 Pfam PF07732 Multicopper oxidase 61 175 5.1E-34 T 13-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 BEN78_14840 83533a5c873e4a2641da8c509ec70b64 609 Gene3D G3DSA:2.60.40.420 181 380 6.4E-41 T 13-10-2018 IPR008972 Cupredoxin BEN78_07210 e6799947f397b9a5fca31b7a499f68ec 632 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 8 622 5.8E-263 T 13-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 BEN78_07210 e6799947f397b9a5fca31b7a499f68ec 632 Pfam PF01134 Glucose inhibited division protein A 9 399 4.3E-160 T 13-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 BEN78_07210 e6799947f397b9a5fca31b7a499f68ec 632 SUPERFAMILY SSF51905 7 262 1.36E-48 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_07210 e6799947f397b9a5fca31b7a499f68ec 632 Gene3D G3DSA:1.10.10.1800 460 551 2.4E-20 T 13-10-2018 BEN78_07210 e6799947f397b9a5fca31b7a499f68ec 632 Gene3D G3DSA:1.10.150.570 570 622 6.4E-22 T 13-10-2018 BEN78_07210 e6799947f397b9a5fca31b7a499f68ec 632 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 6 625 41.896 T 13-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 BEN78_07210 e6799947f397b9a5fca31b7a499f68ec 632 Gene3D G3DSA:3.50.50.60 3 219 1.3E-84 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_07210 e6799947f397b9a5fca31b7a499f68ec 632 Gene3D G3DSA:3.50.50.60 306 459 2.6E-56 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_07210 e6799947f397b9a5fca31b7a499f68ec 632 Pfam PF13932 GidA associated domain 403 617 2.9E-70 T 13-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 BEN78_07210 e6799947f397b9a5fca31b7a499f68ec 632 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 274 288 - T 13-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 BEN78_07210 e6799947f397b9a5fca31b7a499f68ec 632 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 369 392 - T 13-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 BEN78_07210 e6799947f397b9a5fca31b7a499f68ec 632 SMART SM01228 547 618 1.4E-39 T 13-10-2018 BEN78_09855 4751722d0be9a949836177039921e95d 330 PIRSF PIRSF018266 2 330 1.7E-81 T 13-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component BEN78_09855 4751722d0be9a949836177039921e95d 330 Gene3D G3DSA:2.60.120.1440 110 240 1.5E-26 T 13-10-2018 BEN78_09855 4751722d0be9a949836177039921e95d 330 Pfam PF04773 FecR protein 116 209 2.4E-22 T 13-10-2018 IPR006860 FecR protein BEN78_09855 4751722d0be9a949836177039921e95d 330 Gene3D G3DSA:3.55.50.30 254 329 1.3E-8 T 13-10-2018 BEN78_09855 4751722d0be9a949836177039921e95d 330 Pfam PF16220 Domain of unknown function (DUF4880) 9 47 1.0E-8 T 13-10-2018 IPR032623 FecR, N-terminal BEN78_11775 d958a9612b44f7780786c655960377dd 143 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 13-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site BEN78_11775 d958a9612b44f7780786c655960377dd 143 Gene3D G3DSA:1.10.10.10 3 56 1.6E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_11775 d958a9612b44f7780786c655960377dd 143 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 49 5.2E-14 T 13-10-2018 BEN78_11775 d958a9612b44f7780786c655960377dd 143 SMART SM00344 6 109 1.3E-17 T 13-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 BEN78_11775 d958a9612b44f7780786c655960377dd 143 SUPERFAMILY SSF46785 6 57 1.58E-12 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_11775 d958a9612b44f7780786c655960377dd 143 SUPERFAMILY SSF54909 65 142 3.22E-14 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel BEN78_11775 d958a9612b44f7780786c655960377dd 143 Gene3D G3DSA:3.30.70.920 67 140 5.4E-15 T 13-10-2018 BEN78_11775 d958a9612b44f7780786c655960377dd 143 Pfam PF01037 Lrp/AsnC ligand binding domain 69 139 3.7E-15 T 13-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BEN78_11775 d958a9612b44f7780786c655960377dd 143 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 5.5E-14 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BEN78_11775 d958a9612b44f7780786c655960377dd 143 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 5.5E-14 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BEN78_11775 d958a9612b44f7780786c655960377dd 143 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 5.5E-14 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BEN78_16560 372321fac361b773d902a852af287724 185 Gene3D G3DSA:2.60.120.10 2 157 8.4E-53 T 13-10-2018 IPR014710 RmlC-like jelly roll fold BEN78_16560 372321fac361b773d902a852af287724 185 Pfam PF03079 ARD/ARD' family 3 164 3.6E-36 T 13-10-2018 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 BEN78_16560 372321fac361b773d902a852af287724 185 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 172 38.472 T 13-10-2018 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.54+1.13.11.53|MetaCyc: PWY-4361|MetaCyc: PWY-5389 BEN78_16560 372321fac361b773d902a852af287724 185 SUPERFAMILY SSF51182 1 179 1.16E-40 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily BEN78_03520 8576f764db50a0cc1299ef1abde0800f 125 Pfam PF03334 Na+/H+ antiporter subunit 12 92 5.5E-25 T 13-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 BEN78_03520 8576f764db50a0cc1299ef1abde0800f 125 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 12 94 5.9E-25 T 13-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 BEN78_09975 a3abe8658ec2dfcc5608c25cf13a1aed 339 Pfam PF00092 von Willebrand factor type A domain 98 289 4.2E-26 T 13-10-2018 IPR002035 von Willebrand factor, type A BEN78_09975 a3abe8658ec2dfcc5608c25cf13a1aed 339 Gene3D G3DSA:3.40.50.410 96 296 3.5E-54 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BEN78_09975 a3abe8658ec2dfcc5608c25cf13a1aed 339 SMART SM00327 96 296 2.2E-23 T 13-10-2018 IPR002035 von Willebrand factor, type A BEN78_09975 a3abe8658ec2dfcc5608c25cf13a1aed 339 SUPERFAMILY SSF53300 93 292 1.26E-38 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BEN78_07450 b5182ca5b06b1b7438843383f6854a03 451 Pfam PF09856 Predicted transcriptional regulator (DUF2083) 306 447 7.9E-63 T 13-10-2018 IPR018653 Domain of unknown function DUF2083,transcriptional regulator BEN78_07450 b5182ca5b06b1b7438843383f6854a03 451 Pfam PF13560 Helix-turn-helix domain 9 67 2.0E-11 T 13-10-2018 BEN78_07450 b5182ca5b06b1b7438843383f6854a03 451 SUPERFAMILY SSF47413 5 64 1.07E-10 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN78_07450 b5182ca5b06b1b7438843383f6854a03 451 SMART SM00530 11 66 6.5E-8 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN78_07450 b5182ca5b06b1b7438843383f6854a03 451 Pfam PF06114 IrrE N-terminal-like domain 194 305 1.3E-19 T 13-10-2018 IPR010359 IrrE N-terminal-like domain BEN78_07450 b5182ca5b06b1b7438843383f6854a03 451 Gene3D G3DSA:1.10.260.40 4 69 3.2E-11 T 13-10-2018 BEN78_07450 b5182ca5b06b1b7438843383f6854a03 451 PIRSF PIRSF019251 1 449 7.0E-161 T 13-10-2018 IPR026281 HTH-type transcriptional regulator RamB GO:0006355 BEN78_12110 3a3214e5a8157e1f92873126b9be2631 161 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 123 3.7E-32 T 13-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 BEN78_12110 3a3214e5a8157e1f92873126b9be2631 161 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 136 1.2E-35 T 13-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 BEN78_12110 3a3214e5a8157e1f92873126b9be2631 161 SUPERFAMILY SSF52540 24 122 4.18E-15 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_12110 3a3214e5a8157e1f92873126b9be2631 161 Gene3D G3DSA:3.40.50.300 2 149 2.9E-36 T 13-10-2018 BEN78_03220 b28422788e6442e5b469f5e930573060 256 Pfam PF01066 CDP-alcohol phosphatidyltransferase 17 80 8.3E-14 T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 BEN78_03220 b28422788e6442e5b469f5e930573060 256 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 58 80 - T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 BEN78_03220 b28422788e6442e5b469f5e930573060 256 Gene3D G3DSA:1.20.120.1760 12 163 3.4E-14 T 13-10-2018 BEN78_03220 b28422788e6442e5b469f5e930573060 256 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 25 191 1.1E-34 T 13-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 BEN78_04825 b5cc95ebcf5205e8722ff94109779926 201 SUPERFAMILY SSF56784 3 195 3.61E-21 T 13-10-2018 IPR036412 HAD-like superfamily BEN78_04825 b5cc95ebcf5205e8722ff94109779926 201 Gene3D G3DSA:3.40.50.1000 4 191 6.4E-32 T 13-10-2018 IPR023214 HAD superfamily BEN78_04825 b5cc95ebcf5205e8722ff94109779926 201 Gene3D G3DSA:1.20.1440.100 16 88 6.4E-32 T 13-10-2018 BEN78_04825 b5cc95ebcf5205e8722ff94109779926 201 Pfam PF12710 haloacid dehalogenase-like hydrolase 5 185 3.5E-34 T 13-10-2018 BEN78_04825 b5cc95ebcf5205e8722ff94109779926 201 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 4 193 3.0E-34 T 13-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like BEN78_04825 b5cc95ebcf5205e8722ff94109779926 201 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 4 185 1.0E-23 T 13-10-2018 BEN78_09565 5d754e49419daf16ba4606773c7621ff 482 SUPERFAMILY SSF53244 324 473 4.03E-45 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BEN78_09565 5d754e49419daf16ba4606773c7621ff 482 SUPERFAMILY SSF51984 22 107 4.05E-28 T 13-10-2018 BEN78_09565 5d754e49419daf16ba4606773c7621ff 482 Pfam PF02875 Mur ligase family, glutamate ligase domain 327 416 2.3E-18 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 BEN78_09565 5d754e49419daf16ba4606773c7621ff 482 SUPERFAMILY SSF53623 106 323 4.19E-71 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BEN78_09565 5d754e49419daf16ba4606773c7621ff 482 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 20 478 43.068 T 13-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BEN78_09565 5d754e49419daf16ba4606773c7621ff 482 Gene3D G3DSA:3.40.1190.10 109 322 1.9E-82 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BEN78_09565 5d754e49419daf16ba4606773c7621ff 482 Gene3D G3DSA:3.40.50.720 22 107 1.1E-30 T 13-10-2018 BEN78_09565 5d754e49419daf16ba4606773c7621ff 482 Pfam PF08245 Mur ligase middle domain 125 304 3.3E-28 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 BEN78_09565 5d754e49419daf16ba4606773c7621ff 482 Pfam PF01225 Mur ligase family, catalytic domain 23 120 5.6E-28 T 13-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 BEN78_09565 5d754e49419daf16ba4606773c7621ff 482 Gene3D G3DSA:3.90.190.20 323 479 1.7E-46 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BEN78_09565 5d754e49419daf16ba4606773c7621ff 482 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 23 472 3.1E-164 T 13-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BEN78_03970 4d5ea407481a3377033ed59f69245c3e 433 Gene3D G3DSA:2.40.50.100 91 285 7.4E-44 T 13-10-2018 BEN78_03970 4d5ea407481a3377033ed59f69245c3e 433 Gene3D G3DSA:2.40.420.20 75 417 7.4E-44 T 13-10-2018 BEN78_03970 4d5ea407481a3377033ed59f69245c3e 433 Gene3D G3DSA:1.10.287.470 124 251 7.4E-44 T 13-10-2018 BEN78_03970 4d5ea407481a3377033ed59f69245c3e 433 Pfam PF13533 Biotin-lipoyl like 103 138 1.8E-7 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain BEN78_03970 4d5ea407481a3377033ed59f69245c3e 433 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 225 431 7.9E-30 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BEN78_03970 4d5ea407481a3377033ed59f69245c3e 433 Pfam PF13437 HlyD family secretion protein 251 342 2.4E-10 T 13-10-2018 BEN78_03970 4d5ea407481a3377033ed59f69245c3e 433 Gene3D G3DSA:2.40.30.170 80 358 7.4E-44 T 13-10-2018 BEN78_08530 df3592f11b5034ee3440dcdb04a30fd3 331 PRINTS PR00958 Homoserine kinase signature 14 29 1.3E-23 T 13-10-2018 BEN78_08530 df3592f11b5034ee3440dcdb04a30fd3 331 PRINTS PR00958 Homoserine kinase signature 142 155 1.3E-23 T 13-10-2018 BEN78_08530 df3592f11b5034ee3440dcdb04a30fd3 331 PRINTS PR00958 Homoserine kinase signature 256 271 1.3E-23 T 13-10-2018 BEN78_08530 df3592f11b5034ee3440dcdb04a30fd3 331 PRINTS PR00958 Homoserine kinase signature 102 117 1.3E-23 T 13-10-2018 BEN78_08530 df3592f11b5034ee3440dcdb04a30fd3 331 PRINTS PR00958 Homoserine kinase signature 177 194 1.3E-23 T 13-10-2018 BEN78_08530 df3592f11b5034ee3440dcdb04a30fd3 331 Pfam PF08544 GHMP kinases C terminal 215 290 9.7E-11 T 13-10-2018 IPR013750 GHMP kinase, C-terminal domain BEN78_08530 df3592f11b5034ee3440dcdb04a30fd3 331 SUPERFAMILY SSF54211 6 163 1.44E-29 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BEN78_08530 df3592f11b5034ee3440dcdb04a30fd3 331 Gene3D G3DSA:3.30.230.10 3 170 4.9E-42 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BEN78_08530 df3592f11b5034ee3440dcdb04a30fd3 331 PIRSF PIRSF000676 6 308 1.4E-74 T 13-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 BEN78_08530 df3592f11b5034ee3440dcdb04a30fd3 331 Pfam PF00288 GHMP kinases N terminal domain 89 155 1.8E-12 T 13-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 BEN78_08530 df3592f11b5034ee3440dcdb04a30fd3 331 TIGRFAM TIGR00191 thrB: homoserine kinase 11 279 5.6E-57 T 13-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 BEN78_08530 df3592f11b5034ee3440dcdb04a30fd3 331 SUPERFAMILY SSF55060 173 289 3.84E-26 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily BEN78_08530 df3592f11b5034ee3440dcdb04a30fd3 331 Gene3D G3DSA:3.30.70.890 171 301 7.8E-34 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily BEN78_08530 df3592f11b5034ee3440dcdb04a30fd3 331 Hamap MF_00384 Homoserine kinase [thrB]. 9 311 27.403 T 13-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 BEN78_10425 a4cf921f057a4130b04b2bc0aae37188 99 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 8 90 1.5E-27 T 13-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 BEN78_11135 bed249f054f3f87ba0a9db2f11940744 122 SUPERFAMILY SSF50193 1 122 6.67E-53 T 13-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 BEN78_11135 bed249f054f3f87ba0a9db2f11940744 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 13-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11135 bed249f054f3f87ba0a9db2f11940744 122 SMART SM01374 1 122 3.1E-87 T 13-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 BEN78_11135 bed249f054f3f87ba0a9db2f11940744 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 1.7E-56 T 13-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 BEN78_11135 bed249f054f3f87ba0a9db2f11940744 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 9.4E-59 T 13-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 BEN78_11135 bed249f054f3f87ba0a9db2f11940744 122 Gene3D G3DSA:2.40.150.20 1 122 1.2E-55 T 13-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 BEN78_11135 bed249f054f3f87ba0a9db2f11940744 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.222 T 13-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 BEN78_02535 740b7dc477cb42f47cc8d850d14d53d3 496 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 14 484 8.8E-151 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BEN78_02535 740b7dc477cb42f47cc8d850d14d53d3 496 PRINTS PR01050 Pyruvate kinase family signature 71 87 1.2E-55 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BEN78_02535 740b7dc477cb42f47cc8d850d14d53d3 496 PRINTS PR01050 Pyruvate kinase family signature 324 340 1.2E-55 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BEN78_02535 740b7dc477cb42f47cc8d850d14d53d3 496 PRINTS PR01050 Pyruvate kinase family signature 255 279 1.2E-55 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BEN78_02535 740b7dc477cb42f47cc8d850d14d53d3 496 PRINTS PR01050 Pyruvate kinase family signature 305 323 1.2E-55 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BEN78_02535 740b7dc477cb42f47cc8d850d14d53d3 496 PRINTS PR01050 Pyruvate kinase family signature 280 304 1.2E-55 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BEN78_02535 740b7dc477cb42f47cc8d850d14d53d3 496 PRINTS PR01050 Pyruvate kinase family signature 228 254 1.2E-55 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BEN78_02535 740b7dc477cb42f47cc8d850d14d53d3 496 PRINTS PR01050 Pyruvate kinase family signature 198 212 1.2E-55 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BEN78_02535 740b7dc477cb42f47cc8d850d14d53d3 496 SUPERFAMILY SSF50800 82 179 1.6E-22 T 13-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily BEN78_02535 740b7dc477cb42f47cc8d850d14d53d3 496 Gene3D G3DSA:3.20.20.60 14 346 3.5E-152 T 13-10-2018 BEN78_02535 740b7dc477cb42f47cc8d850d14d53d3 496 Gene3D G3DSA:3.40.1380.20 347 480 3.5E-152 T 13-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BEN78_02535 740b7dc477cb42f47cc8d850d14d53d3 496 Pfam PF00224 Pyruvate kinase, barrel domain 14 353 2.3E-116 T 13-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BEN78_02535 740b7dc477cb42f47cc8d850d14d53d3 496 Gene3D G3DSA:2.40.33.10 82 180 3.5E-152 T 13-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BEN78_02535 740b7dc477cb42f47cc8d850d14d53d3 496 Pfam PF02887 Pyruvate kinase, alpha/beta domain 368 481 7.6E-25 T 13-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BEN78_02535 740b7dc477cb42f47cc8d850d14d53d3 496 SUPERFAMILY SSF51621 8 353 8.72E-87 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BEN78_02535 740b7dc477cb42f47cc8d850d14d53d3 496 ProSitePatterns PS00110 Pyruvate kinase active site signature. 226 238 - T 13-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BEN78_02535 740b7dc477cb42f47cc8d850d14d53d3 496 SUPERFAMILY SSF52935 335 485 5.23E-33 T 13-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BEN78_09390 02beb052083f057529cac998600a3274 361 Pfam PF05137 Fimbrial assembly protein (PilN) 267 339 3.1E-9 T 13-10-2018 IPR007813 Fimbrial assembly PilN BEN78_09390 02beb052083f057529cac998600a3274 361 SUPERFAMILY SSF53067 69 165 4.27E-7 T 13-10-2018 BEN78_03515 c3a6f35d25bad41ce5c55b11e1f957e4 94 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 36 87 1.6E-19 T 13-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 BEN78_03515 c3a6f35d25bad41ce5c55b11e1f957e4 94 PIRSF PIRSF028784 4 94 2.8E-26 T 13-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 BEN78_16455 998249c222ead4970ac39d9717b3d1c7 258 Gene3D G3DSA:1.25.40.290 140 257 7.4E-31 T 13-10-2018 BEN78_16455 998249c222ead4970ac39d9717b3d1c7 258 SUPERFAMILY SSF48371 91 257 1.27E-36 T 13-10-2018 IPR016024 Armadillo-type fold BEN78_16455 998249c222ead4970ac39d9717b3d1c7 258 Pfam PF13646 HEAT repeats 93 176 1.8E-6 T 13-10-2018 BEN78_14500 32a311ac0084230950a24305d65f86e5 337 SUPERFAMILY SSF101801 249 322 3.79E-13 T 13-10-2018 IPR036429 SpoA-like superfamily BEN78_14500 32a311ac0084230950a24305d65f86e5 337 SUPERFAMILY SSF103039 7 231 3.92E-18 T 13-10-2018 IPR028976 CheC-like superfamily BEN78_14500 32a311ac0084230950a24305d65f86e5 337 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 5 318 1.4E-101 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BEN78_14500 32a311ac0084230950a24305d65f86e5 337 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 251 318 1.9E-16 T 13-10-2018 IPR001543 Surface presentation of antigen (SpoA) BEN78_14500 32a311ac0084230950a24305d65f86e5 337 Pfam PF02154 Flagellar motor switch protein FliM 38 230 1.5E-70 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BEN78_14500 32a311ac0084230950a24305d65f86e5 337 PRINTS PR00955 Flagellar motor switch protein FliM signature 114 133 2.9E-23 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BEN78_14500 32a311ac0084230950a24305d65f86e5 337 PRINTS PR00955 Flagellar motor switch protein FliM signature 212 230 2.9E-23 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BEN78_14500 32a311ac0084230950a24305d65f86e5 337 PRINTS PR00955 Flagellar motor switch protein FliM signature 89 105 2.9E-23 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BEN78_14500 32a311ac0084230950a24305d65f86e5 337 PRINTS PR00955 Flagellar motor switch protein FliM signature 4 17 2.9E-23 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BEN78_14500 32a311ac0084230950a24305d65f86e5 337 Gene3D G3DSA:3.40.1550.10 44 231 2.0E-54 T 13-10-2018 IPR028976 CheC-like superfamily BEN78_14500 32a311ac0084230950a24305d65f86e5 337 PIRSF PIRSF002888 3 326 3.4E-92 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BEN78_01615 9f129cee23624ed2173de6ec4d997f73 265 SMART SM00530 14 86 5.6E-6 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN78_01615 9f129cee23624ed2173de6ec4d997f73 265 SUPERFAMILY SSF47413 34 84 2.32E-5 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN78_01615 9f129cee23624ed2173de6ec4d997f73 265 Gene3D G3DSA:3.30.450.180 113 228 1.1E-6 T 13-10-2018 BEN78_01615 9f129cee23624ed2173de6ec4d997f73 265 Pfam PF13560 Helix-turn-helix domain 10 89 5.2E-16 T 13-10-2018 BEN78_14265 97c9a0a846f1d1b3fabfb847bbf2b0f1 506 Pfam PF01336 OB-fold nucleic acid binding domain 69 145 2.6E-14 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 BEN78_14265 97c9a0a846f1d1b3fabfb847bbf2b0f1 506 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 19 505 43.465 T 13-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BEN78_14265 97c9a0a846f1d1b3fabfb847bbf2b0f1 506 Gene3D G3DSA:2.40.50.140 13 153 1.9E-37 T 13-10-2018 BEN78_14265 97c9a0a846f1d1b3fabfb847bbf2b0f1 506 SUPERFAMILY SSF55681 161 501 2.58E-116 T 13-10-2018 BEN78_14265 97c9a0a846f1d1b3fabfb847bbf2b0f1 506 SUPERFAMILY SSF50249 12 154 8.36E-36 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN78_14265 97c9a0a846f1d1b3fabfb847bbf2b0f1 506 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 15 503 1.9E-194 T 13-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BEN78_14265 97c9a0a846f1d1b3fabfb847bbf2b0f1 506 PRINTS PR00982 Lysyl-tRNA synthetase signature 261 278 4.0E-39 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BEN78_14265 97c9a0a846f1d1b3fabfb847bbf2b0f1 506 PRINTS PR00982 Lysyl-tRNA synthetase signature 214 230 4.0E-39 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BEN78_14265 97c9a0a846f1d1b3fabfb847bbf2b0f1 506 PRINTS PR00982 Lysyl-tRNA synthetase signature 243 256 4.0E-39 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BEN78_14265 97c9a0a846f1d1b3fabfb847bbf2b0f1 506 PRINTS PR00982 Lysyl-tRNA synthetase signature 198 208 4.0E-39 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BEN78_14265 97c9a0a846f1d1b3fabfb847bbf2b0f1 506 PRINTS PR00982 Lysyl-tRNA synthetase signature 385 401 4.0E-39 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BEN78_14265 97c9a0a846f1d1b3fabfb847bbf2b0f1 506 Pfam PF00152 tRNA synthetases class II (D, K and N) 162 500 1.7E-79 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN78_14265 97c9a0a846f1d1b3fabfb847bbf2b0f1 506 Gene3D G3DSA:3.30.930.10 154 498 1.4E-128 T 13-10-2018 BEN78_06915 efe14d5af4e00204d32ca3a527ae1762 152 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 7 151 33.131 T 13-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 BEN78_06915 efe14d5af4e00204d32ca3a527ae1762 152 Gene3D G3DSA:2.70.40.10 1 150 2.0E-48 T 13-10-2018 IPR036157 dUTPase-like superfamily BEN78_06915 efe14d5af4e00204d32ca3a527ae1762 152 SUPERFAMILY SSF51283 2 151 8.11E-51 T 13-10-2018 IPR036157 dUTPase-like superfamily BEN78_06915 efe14d5af4e00204d32ca3a527ae1762 152 Pfam PF00692 dUTPase 17 150 5.9E-36 T 13-10-2018 IPR029054 dUTPase-like BEN78_06915 efe14d5af4e00204d32ca3a527ae1762 152 TIGRFAM TIGR00576 dut: dUTP diphosphatase 12 150 1.2E-44 T 13-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 BEN78_09710 32253e828506b5384b9a5ae91cb6d283 464 SUPERFAMILY SSF55874 261 380 2.23E-17 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_09710 32253e828506b5384b9a5ae91cb6d283 464 Gene3D G3DSA:1.10.287.130 197 263 2.4E-12 T 13-10-2018 BEN78_09710 32253e828506b5384b9a5ae91cb6d283 464 SMART SM00388 205 270 0.0055 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_09710 32253e828506b5384b9a5ae91cb6d283 464 SUPERFAMILY SSF47384 199 268 1.31E-6 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN78_09710 32253e828506b5384b9a5ae91cb6d283 464 Gene3D G3DSA:3.30.565.10 264 384 4.7E-15 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_02440 1fc93fa55d835f9c2ba0444228f2e60b 617 Gene3D G3DSA:3.40.50.1110 20 317 9.9E-76 T 13-10-2018 IPR036514 SGNH hydrolase superfamily BEN78_02440 1fc93fa55d835f9c2ba0444228f2e60b 617 PIRSF PIRSF037375 1 617 2.3E-150 T 13-10-2018 IPR017186 Lipase, autotransporter EstA BEN78_02440 1fc93fa55d835f9c2ba0444228f2e60b 617 SUPERFAMILY SSF103515 312 604 2.35E-28 T 13-10-2018 IPR036709 Autotransporter beta-domain superfamily BEN78_02440 1fc93fa55d835f9c2ba0444228f2e60b 617 Gene3D G3DSA:2.40.128.130 319 616 2.2E-35 T 13-10-2018 IPR036709 Autotransporter beta-domain superfamily BEN78_02440 1fc93fa55d835f9c2ba0444228f2e60b 617 SMART SM00869 346 606 2.2E-21 T 13-10-2018 IPR005546 Autotransporter beta-domain BEN78_02440 1fc93fa55d835f9c2ba0444228f2e60b 617 Pfam PF03797 Autotransporter beta-domain 354 586 2.2E-30 T 13-10-2018 IPR005546 Autotransporter beta-domain BEN78_02440 1fc93fa55d835f9c2ba0444228f2e60b 617 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 32 304 1.5E-6 T 13-10-2018 IPR001087 GDSL lipase/esterase GO:0016788 BEN78_02440 1fc93fa55d835f9c2ba0444228f2e60b 617 SUPERFAMILY SSF52266 30 309 8.79E-16 T 13-10-2018 BEN78_11405 fb10353e9f60a22952656a82ae439dc9 569 Pfam PF13575 Domain of unknown function (DUF4135) 2 80 1.9E-10 T 13-10-2018 IPR025410 Lantibiotic biosynthesis protein, dehydration domain BEN78_11405 fb10353e9f60a22952656a82ae439dc9 569 SMART SM01260 182 539 1.8E-38 T 13-10-2018 IPR007822 Lanthionine synthetase C-like BEN78_11405 fb10353e9f60a22952656a82ae439dc9 569 PRINTS PR01950 LanC-like protein superfamily signature 185 203 3.0E-11 T 13-10-2018 IPR007822 Lanthionine synthetase C-like BEN78_11405 fb10353e9f60a22952656a82ae439dc9 569 PRINTS PR01950 LanC-like protein superfamily signature 287 302 3.0E-11 T 13-10-2018 IPR007822 Lanthionine synthetase C-like BEN78_11405 fb10353e9f60a22952656a82ae439dc9 569 PRINTS PR01950 LanC-like protein superfamily signature 511 528 3.0E-11 T 13-10-2018 IPR007822 Lanthionine synthetase C-like BEN78_11405 fb10353e9f60a22952656a82ae439dc9 569 PRINTS PR01950 LanC-like protein superfamily signature 345 361 3.0E-11 T 13-10-2018 IPR007822 Lanthionine synthetase C-like BEN78_11405 fb10353e9f60a22952656a82ae439dc9 569 PRINTS PR01950 LanC-like protein superfamily signature 456 469 3.0E-11 T 13-10-2018 IPR007822 Lanthionine synthetase C-like BEN78_11405 fb10353e9f60a22952656a82ae439dc9 569 PRINTS PR01950 LanC-like protein superfamily signature 410 430 3.0E-11 T 13-10-2018 IPR007822 Lanthionine synthetase C-like BEN78_11405 fb10353e9f60a22952656a82ae439dc9 569 Gene3D G3DSA:1.50.10.10 139 535 4.9E-22 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 BEN78_11405 fb10353e9f60a22952656a82ae439dc9 569 Pfam PF05147 Lanthionine synthetase C-like protein 186 533 3.9E-34 T 13-10-2018 IPR007822 Lanthionine synthetase C-like BEN78_11405 fb10353e9f60a22952656a82ae439dc9 569 SUPERFAMILY SSF158745 162 541 9.68E-46 T 13-10-2018 BEN78_02845 4890a2a004385946ec713d101169e51c 105 Hamap MF_02200 Chaperone NapD [napD]. 8 83 14.082 T 13-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly BEN78_02845 4890a2a004385946ec713d101169e51c 105 Gene3D G3DSA:3.30.70.920 8 76 4.4E-11 T 13-10-2018 BEN78_02845 4890a2a004385946ec713d101169e51c 105 Pfam PF03927 NapD protein 8 81 1.0E-16 T 13-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly BEN78_08455 83492f67e51d4178c5e9620230acebf1 74 Gene3D G3DSA:2.10.260.10 1 73 2.6E-6 T 13-10-2018 BEN78_08455 83492f67e51d4178c5e9620230acebf1 74 SUPERFAMILY SSF89447 3 64 8.2E-14 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily BEN78_08455 83492f67e51d4178c5e9620230acebf1 74 TIGRFAM TIGR02609 doc_partner: putative addiction module antidote 4 74 2.5E-21 T 13-10-2018 IPR013432 Putative addiction module antidote BEN78_08455 83492f67e51d4178c5e9620230acebf1 74 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 49 8.7E-8 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 BEN78_08455 83492f67e51d4178c5e9620230acebf1 74 SMART SM00966 7 52 6.6E-9 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 BEN78_05900 13aea9006e17ab85f5ad3602eb3070ec 1209 Gene3D G3DSA:3.40.50.300 13 456 5.1E-109 T 13-10-2018 BEN78_05900 13aea9006e17ab85f5ad3602eb3070ec 1209 SUPERFAMILY SSF52540 18 849 3.91E-93 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_05900 13aea9006e17ab85f5ad3602eb3070ec 1209 Pfam PF13361 UvrD-like helicase C-terminal domain 578 656 4.1E-7 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 BEN78_05900 13aea9006e17ab85f5ad3602eb3070ec 1209 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1049 1143 9.7E-5 T 13-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type BEN78_05900 13aea9006e17ab85f5ad3602eb3070ec 1209 SUPERFAMILY SSF52980 907 1198 5.15E-53 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 BEN78_05900 13aea9006e17ab85f5ad3602eb3070ec 1209 Pfam PF13361 UvrD-like helicase C-terminal domain 753 848 6.0E-13 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 BEN78_05900 13aea9006e17ab85f5ad3602eb3070ec 1209 Gene3D G3DSA:1.10.486.10 608 751 2.7E-101 T 13-10-2018 BEN78_05900 13aea9006e17ab85f5ad3602eb3070ec 1209 Gene3D G3DSA:3.40.50.300 466 857 2.7E-101 T 13-10-2018 BEN78_05900 13aea9006e17ab85f5ad3602eb3070ec 1209 Pfam PF00580 UvrD/REP helicase N-terminal domain 17 456 9.6E-55 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 BEN78_05900 13aea9006e17ab85f5ad3602eb3070ec 1209 Gene3D G3DSA:1.10.3170.10 160 362 5.1E-109 T 13-10-2018 BEN78_05900 13aea9006e17ab85f5ad3602eb3070ec 1209 Gene3D G3DSA:3.90.320.10 896 1202 2.9E-66 T 13-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal BEN78_05900 13aea9006e17ab85f5ad3602eb3070ec 1209 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 7 1197 18.599 T 13-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 BEN78_12630 cdd885f97f25a54ff26b845ed0d82e6e 437 SUPERFAMILY SSF53474 120 401 2.62E-16 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_12630 cdd885f97f25a54ff26b845ed0d82e6e 437 Gene3D G3DSA:3.40.50.1820 20 410 2.5E-54 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_12630 cdd885f97f25a54ff26b845ed0d82e6e 437 Pfam PF03403 Platelet-activating factor acetylhydrolase, isoform II 26 160 2.1E-7 T 13-10-2018 IPR005065 Platelet-activating factor acetylhydrolase-like GO:0003847|GO:0016042 KEGG: 00565+3.1.1.47 BEN78_12170 f5ec08bfa2dfc21044fc686760a43a6a 863 Gene3D G3DSA:1.10.439.10 22 181 4.6E-42 T 13-10-2018 IPR023343 Penicillin amidase type, domain 1 GO:0016811 BEN78_12170 f5ec08bfa2dfc21044fc686760a43a6a 863 Gene3D G3DSA:1.10.1400.10 597 748 1.7E-105 T 13-10-2018 BEN78_12170 f5ec08bfa2dfc21044fc686760a43a6a 863 Pfam PF01804 Penicillin amidase 51 838 2.5E-121 T 13-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 BEN78_12170 f5ec08bfa2dfc21044fc686760a43a6a 863 PIRSF PIRSF001227 8 853 2.7E-138 T 13-10-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 BEN78_12170 f5ec08bfa2dfc21044fc686760a43a6a 863 SUPERFAMILY SSF56235 46 848 4.63E-155 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BEN78_12170 f5ec08bfa2dfc21044fc686760a43a6a 863 Gene3D G3DSA:3.60.20.10 295 832 1.7E-105 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BEN78_12170 f5ec08bfa2dfc21044fc686760a43a6a 863 Gene3D G3DSA:2.30.120.10 374 438 1.7E-105 T 13-10-2018 BEN78_08740 7e695de4caf95b25503e54492dbde7ee 135 Pfam PF09361 Phasin protein 7 108 3.0E-14 T 13-10-2018 IPR018968 Phasin BEN78_06260 2ef78e9c24193f1ec694326f563143dc 450 SMART SM00387 340 448 1.6E-26 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_06260 2ef78e9c24193f1ec694326f563143dc 450 SMART SM00388 228 299 0.0034 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_06260 2ef78e9c24193f1ec694326f563143dc 450 Gene3D G3DSA:1.10.287.130 205 294 1.0E-10 T 13-10-2018 BEN78_06260 2ef78e9c24193f1ec694326f563143dc 450 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 447 2.6E-20 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_06260 2ef78e9c24193f1ec694326f563143dc 450 Gene3D G3DSA:3.30.565.10 300 450 9.0E-39 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_06260 2ef78e9c24193f1ec694326f563143dc 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 426 3.3E-20 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_06260 2ef78e9c24193f1ec694326f563143dc 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 405 3.3E-20 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_06260 2ef78e9c24193f1ec694326f563143dc 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 391 3.3E-20 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_06260 2ef78e9c24193f1ec694326f563143dc 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 445 3.3E-20 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_06260 2ef78e9c24193f1ec694326f563143dc 450 SUPERFAMILY SSF55874 290 446 7.47E-40 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_04765 408d80db3e6091a3dc59e37366658746 291 Pfam PF00753 Metallo-beta-lactamase superfamily 32 219 2.5E-17 T 13-10-2018 IPR001279 Metallo-beta-lactamase BEN78_04765 408d80db3e6091a3dc59e37366658746 291 Gene3D G3DSA:3.60.15.10 4 281 4.3E-51 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN78_04765 408d80db3e6091a3dc59e37366658746 291 SMART SM00849 32 267 4.7E-11 T 13-10-2018 IPR001279 Metallo-beta-lactamase BEN78_04765 408d80db3e6091a3dc59e37366658746 291 SUPERFAMILY SSF56281 26 277 8.91E-32 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN78_03400 1a09303f62c8bb015ee8bb5bb96c7861 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 141 2.4E-63 T 13-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_03400 1a09303f62c8bb015ee8bb5bb96c7861 142 Gene3D G3DSA:3.90.1180.10 1 142 5.1E-64 T 13-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 BEN78_03400 1a09303f62c8bb015ee8bb5bb96c7861 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 13-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 BEN78_03400 1a09303f62c8bb015ee8bb5bb96c7861 142 PIRSF PIRSF002181 1 141 1.2E-52 T 13-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 BEN78_03400 1a09303f62c8bb015ee8bb5bb96c7861 142 Pfam PF00572 Ribosomal protein L13 15 138 2.4E-56 T 13-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 BEN78_03400 1a09303f62c8bb015ee8bb5bb96c7861 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.257 T 13-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 BEN78_03400 1a09303f62c8bb015ee8bb5bb96c7861 142 SUPERFAMILY SSF52161 1 139 2.49E-60 T 13-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 BEN78_09610 81b89a22311b3b5bf2f7d1794f25d036 316 TIGRFAM TIGR00586 mutt: mutator mutT protein 6 129 1.4E-30 T 13-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 BEN78_09610 81b89a22311b3b5bf2f7d1794f25d036 316 ProSitePatterns PS00893 Nudix box signature. 40 61 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BEN78_09610 81b89a22311b3b5bf2f7d1794f25d036 316 SUPERFAMILY SSF55811 4 128 1.9E-34 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BEN78_09610 81b89a22311b3b5bf2f7d1794f25d036 316 Gene3D G3DSA:3.20.20.70 129 316 1.2E-45 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_09610 81b89a22311b3b5bf2f7d1794f25d036 316 Pfam PF00293 NUDIX domain 8 126 3.3E-20 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BEN78_09610 81b89a22311b3b5bf2f7d1794f25d036 316 Pfam PF02581 Thiamine monophosphate synthase 134 310 1.1E-36 T 13-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BEN78_09610 81b89a22311b3b5bf2f7d1794f25d036 316 PRINTS PR00502 NUDIX hydrolase family signature 35 49 3.2E-8 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BEN78_09610 81b89a22311b3b5bf2f7d1794f25d036 316 PRINTS PR00502 NUDIX hydrolase family signature 49 64 3.2E-8 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BEN78_09610 81b89a22311b3b5bf2f7d1794f25d036 316 SUPERFAMILY SSF51391 116 312 2.62E-45 T 13-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BEN78_09610 81b89a22311b3b5bf2f7d1794f25d036 316 Gene3D G3DSA:3.90.79.10 1 128 3.6E-36 T 13-10-2018 BEN78_06275 668937d8938b8e70905e2ddaad7a2ad4 112 PRINTS PR00340 P-II protein signature 2 17 1.9E-40 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BEN78_06275 668937d8938b8e70905e2ddaad7a2ad4 112 PRINTS PR00340 P-II protein signature 52 75 1.9E-40 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BEN78_06275 668937d8938b8e70905e2ddaad7a2ad4 112 PRINTS PR00340 P-II protein signature 83 103 1.9E-40 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BEN78_06275 668937d8938b8e70905e2ddaad7a2ad4 112 PRINTS PR00340 P-II protein signature 23 41 1.9E-40 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BEN78_06275 668937d8938b8e70905e2ddaad7a2ad4 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.2E-40 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BEN78_06275 668937d8938b8e70905e2ddaad7a2ad4 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 13-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 BEN78_06275 668937d8938b8e70905e2ddaad7a2ad4 112 SMART SM00938 4 105 1.5E-61 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BEN78_06275 668937d8938b8e70905e2ddaad7a2ad4 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 13-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 BEN78_06275 668937d8938b8e70905e2ddaad7a2ad4 112 PIRSF PIRSF039144 1 112 9.9E-51 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BEN78_06275 668937d8938b8e70905e2ddaad7a2ad4 112 Gene3D G3DSA:3.30.70.120 1 112 3.9E-43 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BEN78_06275 668937d8938b8e70905e2ddaad7a2ad4 112 SUPERFAMILY SSF54913 1 112 2.29E-43 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta BEN78_11500 5af1acc996871a37d6f1c32badde75dd 457 ProSitePatterns PS00217 Sugar transport proteins signature 2. 136 161 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BEN78_11500 5af1acc996871a37d6f1c32badde75dd 457 Pfam PF00083 Sugar (and other) transporter 34 439 1.7E-29 T 13-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 BEN78_11500 5af1acc996871a37d6f1c32badde75dd 457 Gene3D G3DSA:1.20.1250.20 29 451 2.2E-62 T 13-10-2018 BEN78_11500 5af1acc996871a37d6f1c32badde75dd 457 ProSitePatterns PS00216 Sugar transport proteins signature 1. 310 327 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BEN78_11500 5af1acc996871a37d6f1c32badde75dd 457 SUPERFAMILY SSF103473 17 437 3.27E-53 T 13-10-2018 IPR036259 MFS transporter superfamily BEN78_00980 7ad075fe06ff1acfc25a04b996513b53 341 SUPERFAMILY SSF51161 37 321 4.8E-73 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily BEN78_00980 7ad075fe06ff1acfc25a04b996513b53 341 Gene3D G3DSA:3.40.1390.10 1 99 2.2E-26 T 13-10-2018 BEN78_00980 7ad075fe06ff1acfc25a04b996513b53 341 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 12 332 8.6E-115 T 13-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 BEN78_00980 7ad075fe06ff1acfc25a04b996513b53 341 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 228 256 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 BEN78_00980 7ad075fe06ff1acfc25a04b996513b53 341 Gene3D G3DSA:2.160.10.10 100 311 1.1E-57 T 13-10-2018 BEN78_00980 7ad075fe06ff1acfc25a04b996513b53 341 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 25 92 1.8E-18 T 13-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 BEN78_00980 7ad075fe06ff1acfc25a04b996513b53 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 125 157 4.8E-8 T 13-10-2018 IPR001451 Hexapeptide repeat BEN78_00980 7ad075fe06ff1acfc25a04b996513b53 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 225 260 2.2E-5 T 13-10-2018 IPR001451 Hexapeptide repeat BEN78_00980 7ad075fe06ff1acfc25a04b996513b53 341 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 8 329 35.071 T 13-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 BEN78_14045 cdae7b7ddb2dd687d637767a773ab6be 959 Gene3D G3DSA:3.30.450.40 326 501 1.2E-21 T 13-10-2018 IPR029016 GAF-like domain superfamily BEN78_14045 cdae7b7ddb2dd687d637767a773ab6be 959 Gene3D G3DSA:3.30.450.40 123 308 1.5E-24 T 13-10-2018 IPR029016 GAF-like domain superfamily BEN78_14045 cdae7b7ddb2dd687d637767a773ab6be 959 Gene3D G3DSA:3.20.20.450 713 957 2.4E-85 T 13-10-2018 IPR035919 EAL domain superfamily BEN78_14045 cdae7b7ddb2dd687d637767a773ab6be 959 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 537 699 1.2E-34 T 13-10-2018 IPR000160 GGDEF domain BEN78_14045 cdae7b7ddb2dd687d637767a773ab6be 959 SMART SM00267 528 701 1.8E-59 T 13-10-2018 IPR000160 GGDEF domain BEN78_14045 cdae7b7ddb2dd687d637767a773ab6be 959 SUPERFAMILY SSF55781 350 498 3.03E-20 T 13-10-2018 BEN78_14045 cdae7b7ddb2dd687d637767a773ab6be 959 Pfam PF00990 Diguanylate cyclase, GGDEF domain 539 697 5.5E-44 T 13-10-2018 IPR000160 GGDEF domain BEN78_14045 cdae7b7ddb2dd687d637767a773ab6be 959 SUPERFAMILY SSF55073 544 702 4.71E-43 T 13-10-2018 IPR029787 Nucleotide cyclase BEN78_14045 cdae7b7ddb2dd687d637767a773ab6be 959 Pfam PF00563 EAL domain 717 950 4.8E-65 T 13-10-2018 IPR001633 EAL domain BEN78_14045 cdae7b7ddb2dd687d637767a773ab6be 959 SMART SM00052 711 955 8.1E-95 T 13-10-2018 IPR001633 EAL domain BEN78_14045 cdae7b7ddb2dd687d637767a773ab6be 959 SUPERFAMILY SSF55781 128 302 3.93E-22 T 13-10-2018 BEN78_14045 cdae7b7ddb2dd687d637767a773ab6be 959 SMART SM00065 350 497 2.2E-4 T 13-10-2018 IPR003018 GAF domain GO:0005515 BEN78_14045 cdae7b7ddb2dd687d637767a773ab6be 959 SMART SM00065 132 304 3.0E-6 T 13-10-2018 IPR003018 GAF domain GO:0005515 BEN78_14045 cdae7b7ddb2dd687d637767a773ab6be 959 SUPERFAMILY SSF141868 717 951 8.63E-78 T 13-10-2018 IPR035919 EAL domain superfamily BEN78_14045 cdae7b7ddb2dd687d637767a773ab6be 959 Gene3D G3DSA:3.30.70.270 533 712 7.6E-53 T 13-10-2018 BEN78_14045 cdae7b7ddb2dd687d637767a773ab6be 959 Pfam PF13185 GAF domain 148 295 7.6E-13 T 13-10-2018 IPR003018 GAF domain GO:0005515 BEN78_14045 cdae7b7ddb2dd687d637767a773ab6be 959 Pfam PF13185 GAF domain 354 487 1.4E-12 T 13-10-2018 IPR003018 GAF domain GO:0005515 BEN78_07345 e379d4bd0200579446aac27c2df9062d 800 Pfam PF00474 Sodium:solute symporter family 340 740 6.7E-45 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 BEN78_07345 e379d4bd0200579446aac27c2df9062d 800 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 340 742 3.3E-63 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 BEN78_07345 e379d4bd0200579446aac27c2df9062d 800 Gene3D G3DSA:1.20.1730.10 327 797 2.9E-108 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily BEN78_09605 222b51741f20666670b4ef38ff213c95 918 Pfam PF07517 SecA DEAD-like domain 7 398 8.1E-131 T 13-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 BEN78_09605 222b51741f20666670b4ef38ff213c95 918 Gene3D G3DSA:3.10.450.50 834 917 4.5E-9 T 13-10-2018 BEN78_09605 222b51741f20666670b4ef38ff213c95 918 Gene3D G3DSA:3.40.50.300 22 411 1.1E-174 T 13-10-2018 BEN78_09605 222b51741f20666670b4ef38ff213c95 918 Pfam PF07516 SecA Wing and Scaffold domain 619 830 6.3E-66 T 13-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 BEN78_09605 222b51741f20666670b4ef38ff213c95 918 ProSitePatterns PS01312 SecA family signature. 496 511 - T 13-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 BEN78_09605 222b51741f20666670b4ef38ff213c95 918 Gene3D G3DSA:1.10.3060.10 622 833 4.6E-73 T 13-10-2018 BEN78_09605 222b51741f20666670b4ef38ff213c95 918 Pfam PF01043 SecA preprotein cross-linking domain 234 354 8.8E-38 T 13-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 BEN78_09605 222b51741f20666670b4ef38ff213c95 918 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 833 20.015 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BEN78_09605 222b51741f20666670b4ef38ff213c95 918 PRINTS PR00906 SecA protein signature 372 389 3.3E-71 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BEN78_09605 222b51741f20666670b4ef38ff213c95 918 PRINTS PR00906 SecA protein signature 171 191 3.3E-71 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BEN78_09605 222b51741f20666670b4ef38ff213c95 918 PRINTS PR00906 SecA protein signature 63 87 3.3E-71 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BEN78_09605 222b51741f20666670b4ef38ff213c95 918 PRINTS PR00906 SecA protein signature 117 127 3.3E-71 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BEN78_09605 222b51741f20666670b4ef38ff213c95 918 PRINTS PR00906 SecA protein signature 409 422 3.3E-71 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BEN78_09605 222b51741f20666670b4ef38ff213c95 918 PRINTS PR00906 SecA protein signature 101 115 3.3E-71 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BEN78_09605 222b51741f20666670b4ef38ff213c95 918 PRINTS PR00906 SecA protein signature 335 357 3.3E-71 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BEN78_09605 222b51741f20666670b4ef38ff213c95 918 Gene3D G3DSA:3.40.50.300 413 621 4.1E-87 T 13-10-2018 BEN78_09605 222b51741f20666670b4ef38ff213c95 918 SUPERFAMILY SSF52540 6 411 1.45E-85 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_09605 222b51741f20666670b4ef38ff213c95 918 SUPERFAMILY SSF81886 621 906 1.29E-78 T 13-10-2018 IPR036266 SecA, Wing/Scaffold superfamily BEN78_09605 222b51741f20666670b4ef38ff213c95 918 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 819 0.0 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BEN78_09605 222b51741f20666670b4ef38ff213c95 918 Gene3D G3DSA:3.90.1440.10 230 364 1.1E-174 T 13-10-2018 BEN78_09605 222b51741f20666670b4ef38ff213c95 918 Pfam PF02810 SEC-C motif 898 916 1.1E-10 T 13-10-2018 IPR004027 SEC-C motif BEN78_09605 222b51741f20666670b4ef38ff213c95 918 SMART SM00957 6 398 0.0 T 13-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 BEN78_09605 222b51741f20666670b4ef38ff213c95 918 SUPERFAMILY SSF52540 412 619 2.48E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_09605 222b51741f20666670b4ef38ff213c95 918 SUPERFAMILY SSF81767 228 364 4.32E-42 T 13-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 BEN78_09605 222b51741f20666670b4ef38ff213c95 918 SMART SM00958 229 354 7.5E-77 T 13-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 BEN78_05770 9cd9ee9059380dad2acf983a19db33d8 561 Gene3D G3DSA:3.50.50.60 18 395 1.2E-189 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_05770 9cd9ee9059380dad2acf983a19db33d8 561 Pfam PF13450 NAD(P)-binding Rossmann-like domain 23 68 8.1E-7 T 13-10-2018 BEN78_05770 9cd9ee9059380dad2acf983a19db33d8 561 SUPERFAMILY SSF51905 14 460 7.87E-55 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_05770 9cd9ee9059380dad2acf983a19db33d8 561 SUPERFAMILY SSF54862 462 559 5.99E-28 T 13-10-2018 BEN78_05770 9cd9ee9059380dad2acf983a19db33d8 561 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 458 558 2.1E-48 T 13-10-2018 BEN78_05770 9cd9ee9059380dad2acf983a19db33d8 561 SUPERFAMILY SSF54373 222 316 3.84E-38 T 13-10-2018 BEN78_05770 9cd9ee9059380dad2acf983a19db33d8 561 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 189 204 1.7E-6 T 13-10-2018 BEN78_05770 9cd9ee9059380dad2acf983a19db33d8 561 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 20 42 1.7E-6 T 13-10-2018 BEN78_05770 9cd9ee9059380dad2acf983a19db33d8 561 Gene3D G3DSA:3.30.9.90 90 462 1.2E-189 T 13-10-2018 BEN78_05770 9cd9ee9059380dad2acf983a19db33d8 561 Gene3D G3DSA:3.30.70.20 463 556 2.5E-38 T 13-10-2018 BEN78_13645 a66da34add200e6280e1b6417c7fcff3 256 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 167 251 9.3E-26 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BEN78_13645 a66da34add200e6280e1b6417c7fcff3 256 Gene3D G3DSA:3.10.50.40 153 256 1.3E-40 T 13-10-2018 BEN78_13645 a66da34add200e6280e1b6417c7fcff3 256 SUPERFAMILY SSF54534 57 255 3.14E-57 T 13-10-2018 BEN78_13645 a66da34add200e6280e1b6417c7fcff3 256 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 49 158 3.6E-30 T 13-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 BEN78_13645 a66da34add200e6280e1b6417c7fcff3 256 Gene3D G3DSA:1.10.287.460 48 152 3.1E-26 T 13-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 BEN78_04835 4b2af606ba91475d3d6d78c758e2021f 401 Gene3D G3DSA:3.10.290.10 322 399 2.8E-18 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BEN78_04835 4b2af606ba91475d3d6d78c758e2021f 401 Gene3D G3DSA:3.40.50.620 1 217 7.3E-72 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_04835 4b2af606ba91475d3d6d78c758e2021f 401 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 45 67 1.7E-24 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 BEN78_04835 4b2af606ba91475d3d6d78c758e2021f 401 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 160 175 1.7E-24 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 BEN78_04835 4b2af606ba91475d3d6d78c758e2021f 401 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 177 199 1.7E-24 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 BEN78_04835 4b2af606ba91475d3d6d78c758e2021f 401 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 210 222 1.7E-24 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 BEN78_04835 4b2af606ba91475d3d6d78c758e2021f 401 SUPERFAMILY SSF52374 6 312 5.12E-88 T 13-10-2018 BEN78_04835 4b2af606ba91475d3d6d78c758e2021f 401 Pfam PF00579 tRNA synthetases class I (W and Y) 31 311 5.7E-71 T 13-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN78_04835 4b2af606ba91475d3d6d78c758e2021f 401 Gene3D G3DSA:1.10.240.10 221 319 2.2E-9 T 13-10-2018 BEN78_04835 4b2af606ba91475d3d6d78c758e2021f 401 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 1 399 44.899 T 13-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 BEN78_04835 4b2af606ba91475d3d6d78c758e2021f 401 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 41 51 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN78_04835 4b2af606ba91475d3d6d78c758e2021f 401 SUPERFAMILY SSF55174 332 399 4.58E-15 T 13-10-2018 BEN78_04835 4b2af606ba91475d3d6d78c758e2021f 401 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 5 398 1.6E-106 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 BEN78_02860 c8b2c98ca72062e5e9ae4be3aa4e355d 587 Pfam PF00152 tRNA synthetases class II (D, K and N) 120 557 5.8E-107 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN78_02860 c8b2c98ca72062e5e9ae4be3aa4e355d 587 PRINTS PR01042 Aspartyl-tRNA synthetase signature 209 222 3.0E-26 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN78_02860 c8b2c98ca72062e5e9ae4be3aa4e355d 587 PRINTS PR01042 Aspartyl-tRNA synthetase signature 517 531 3.0E-26 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN78_02860 c8b2c98ca72062e5e9ae4be3aa4e355d 587 PRINTS PR01042 Aspartyl-tRNA synthetase signature 473 489 3.0E-26 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN78_02860 c8b2c98ca72062e5e9ae4be3aa4e355d 587 PRINTS PR01042 Aspartyl-tRNA synthetase signature 192 204 3.0E-26 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN78_02860 c8b2c98ca72062e5e9ae4be3aa4e355d 587 SUPERFAMILY SSF55681 110 583 3.83E-106 T 13-10-2018 BEN78_02860 c8b2c98ca72062e5e9ae4be3aa4e355d 587 SUPERFAMILY SSF55261 293 419 2.62E-41 T 13-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 BEN78_02860 c8b2c98ca72062e5e9ae4be3aa4e355d 587 Gene3D G3DSA:3.30.1360.30 274 419 6.4E-191 T 13-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 BEN78_02860 c8b2c98ca72062e5e9ae4be3aa4e355d 587 Gene3D G3DSA:2.40.50.140 1 108 9.1E-29 T 13-10-2018 BEN78_02860 c8b2c98ca72062e5e9ae4be3aa4e355d 587 SUPERFAMILY SSF50249 1 111 2.57E-27 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN78_02860 c8b2c98ca72062e5e9ae4be3aa4e355d 587 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 583 32.657 T 13-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 BEN78_02860 c8b2c98ca72062e5e9ae4be3aa4e355d 587 Gene3D G3DSA:3.30.930.10 119 581 6.4E-191 T 13-10-2018 BEN78_02860 c8b2c98ca72062e5e9ae4be3aa4e355d 587 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 582 1.4E-229 T 13-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 BEN78_02860 c8b2c98ca72062e5e9ae4be3aa4e355d 587 Pfam PF01336 OB-fold nucleic acid binding domain 18 104 1.6E-13 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 BEN78_02860 c8b2c98ca72062e5e9ae4be3aa4e355d 587 Pfam PF02938 GAD domain 310 404 2.9E-25 T 13-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 BEN78_00040 bfa971166d3b9a7e1951ab7a6fe94ffa 732 Gene3D G3DSA:3.30.365.10 445 583 9.1E-79 T 13-10-2018 BEN78_00040 bfa971166d3b9a7e1951ab7a6fe94ffa 732 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 161 668 1.8E-123 T 13-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 BEN78_00040 bfa971166d3b9a7e1951ab7a6fe94ffa 732 Gene3D G3DSA:3.30.365.10 188 280 1.1E-61 T 13-10-2018 BEN78_00040 bfa971166d3b9a7e1951ab7a6fe94ffa 732 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 36 137 2.4E-20 T 13-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead BEN78_00040 bfa971166d3b9a7e1951ab7a6fe94ffa 732 SMART SM01008 32 138 1.5E-24 T 13-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead BEN78_00040 bfa971166d3b9a7e1951ab7a6fe94ffa 732 Gene3D G3DSA:3.30.365.10 584 723 9.1E-79 T 13-10-2018 BEN78_00040 bfa971166d3b9a7e1951ab7a6fe94ffa 732 SUPERFAMILY SSF56003 136 730 4.84E-166 T 13-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 BEN78_00040 bfa971166d3b9a7e1951ab7a6fe94ffa 732 Gene3D G3DSA:3.30.365.10 164 384 1.1E-61 T 13-10-2018 BEN78_00040 bfa971166d3b9a7e1951ab7a6fe94ffa 732 Gene3D G3DSA:3.90.1170.50 17 138 6.4E-24 T 13-10-2018 BEN78_00040 bfa971166d3b9a7e1951ab7a6fe94ffa 732 SUPERFAMILY SSF54665 12 144 2.75E-30 T 13-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily BEN78_16860 bfa971166d3b9a7e1951ab7a6fe94ffa 732 Gene3D G3DSA:3.30.365.10 445 583 9.1E-79 T 13-10-2018 BEN78_16860 bfa971166d3b9a7e1951ab7a6fe94ffa 732 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 161 668 1.8E-123 T 13-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 BEN78_16860 bfa971166d3b9a7e1951ab7a6fe94ffa 732 Gene3D G3DSA:3.30.365.10 188 280 1.1E-61 T 13-10-2018 BEN78_16860 bfa971166d3b9a7e1951ab7a6fe94ffa 732 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 36 137 2.4E-20 T 13-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead BEN78_16860 bfa971166d3b9a7e1951ab7a6fe94ffa 732 SMART SM01008 32 138 1.5E-24 T 13-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead BEN78_16860 bfa971166d3b9a7e1951ab7a6fe94ffa 732 Gene3D G3DSA:3.30.365.10 584 723 9.1E-79 T 13-10-2018 BEN78_16860 bfa971166d3b9a7e1951ab7a6fe94ffa 732 SUPERFAMILY SSF56003 136 730 4.84E-166 T 13-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 BEN78_16860 bfa971166d3b9a7e1951ab7a6fe94ffa 732 Gene3D G3DSA:3.30.365.10 164 384 1.1E-61 T 13-10-2018 BEN78_16860 bfa971166d3b9a7e1951ab7a6fe94ffa 732 Gene3D G3DSA:3.90.1170.50 17 138 6.4E-24 T 13-10-2018 BEN78_16860 bfa971166d3b9a7e1951ab7a6fe94ffa 732 SUPERFAMILY SSF54665 12 144 2.75E-30 T 13-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily BEN78_08070 9347300fc35efa2a0e6e3c6e0c48ac66 908 SUPERFAMILY SSF56672 502 908 1.56E-152 T 13-10-2018 BEN78_08070 9347300fc35efa2a0e6e3c6e0c48ac66 908 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 167 259 2.1E-29 T 13-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 BEN78_08070 9347300fc35efa2a0e6e3c6e0c48ac66 908 TIGRFAM TIGR00593 pola: DNA polymerase I 5 908 3.3E-265 T 13-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN78_08070 9347300fc35efa2a0e6e3c6e0c48ac66 908 Gene3D G3DSA:3.30.70.370 644 904 3.1E-106 T 13-10-2018 BEN78_08070 9347300fc35efa2a0e6e3c6e0c48ac66 908 Pfam PF00476 DNA polymerase family A 530 905 2.6E-144 T 13-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN78_08070 9347300fc35efa2a0e6e3c6e0c48ac66 908 Pfam PF01612 3'-5' exonuclease 310 497 6.4E-35 T 13-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 BEN78_08070 9347300fc35efa2a0e6e3c6e0c48ac66 908 Gene3D G3DSA:1.10.150.20 170 242 7.5E-92 T 13-10-2018 BEN78_08070 9347300fc35efa2a0e6e3c6e0c48ac66 908 Gene3D G3DSA:1.20.1060.10 523 638 1.9E-38 T 13-10-2018 BEN78_08070 9347300fc35efa2a0e6e3c6e0c48ac66 908 SUPERFAMILY SSF53098 307 497 9.11E-53 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily BEN78_08070 9347300fc35efa2a0e6e3c6e0c48ac66 908 Gene3D G3DSA:1.10.150.20 689 832 3.1E-106 T 13-10-2018 BEN78_08070 9347300fc35efa2a0e6e3c6e0c48ac66 908 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 166 1.0E-47 T 13-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 BEN78_08070 9347300fc35efa2a0e6e3c6e0c48ac66 908 SMART SM00475 3 257 2.2E-117 T 13-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 BEN78_08070 9347300fc35efa2a0e6e3c6e0c48ac66 908 PRINTS PR00868 DNA-polymerase family A (pol I) signature 710 723 1.4E-76 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN78_08070 9347300fc35efa2a0e6e3c6e0c48ac66 908 PRINTS PR00868 DNA-polymerase family A (pol I) signature 855 868 1.4E-76 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN78_08070 9347300fc35efa2a0e6e3c6e0c48ac66 908 PRINTS PR00868 DNA-polymerase family A (pol I) signature 635 657 1.4E-76 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN78_08070 9347300fc35efa2a0e6e3c6e0c48ac66 908 PRINTS PR00868 DNA-polymerase family A (pol I) signature 658 673 1.4E-76 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN78_08070 9347300fc35efa2a0e6e3c6e0c48ac66 908 PRINTS PR00868 DNA-polymerase family A (pol I) signature 793 804 1.4E-76 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN78_08070 9347300fc35efa2a0e6e3c6e0c48ac66 908 PRINTS PR00868 DNA-polymerase family A (pol I) signature 825 841 1.4E-76 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN78_08070 9347300fc35efa2a0e6e3c6e0c48ac66 908 PRINTS PR00868 DNA-polymerase family A (pol I) signature 734 759 1.4E-76 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN78_08070 9347300fc35efa2a0e6e3c6e0c48ac66 908 PRINTS PR00868 DNA-polymerase family A (pol I) signature 771 782 1.4E-76 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN78_08070 9347300fc35efa2a0e6e3c6e0c48ac66 908 PRINTS PR00868 DNA-polymerase family A (pol I) signature 680 703 1.4E-76 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN78_08070 9347300fc35efa2a0e6e3c6e0c48ac66 908 SMART SM00279 169 204 2.3E-15 T 13-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 BEN78_08070 9347300fc35efa2a0e6e3c6e0c48ac66 908 SMART SM00482 666 872 5.6E-106 T 13-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN78_08070 9347300fc35efa2a0e6e3c6e0c48ac66 908 SUPERFAMILY SSF47807 167 281 2.69E-33 T 13-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily BEN78_08070 9347300fc35efa2a0e6e3c6e0c48ac66 908 Gene3D G3DSA:3.40.50.1010 5 273 7.5E-92 T 13-10-2018 BEN78_08070 9347300fc35efa2a0e6e3c6e0c48ac66 908 Gene3D G3DSA:3.30.420.10 308 521 2.3E-67 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BEN78_08070 9347300fc35efa2a0e6e3c6e0c48ac66 908 SMART SM00474 310 497 1.6E-36 T 13-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 BEN78_08070 9347300fc35efa2a0e6e3c6e0c48ac66 908 SUPERFAMILY SSF88723 2 166 1.57E-52 T 13-10-2018 IPR029060 PIN-like domain superfamily BEN78_08070 9347300fc35efa2a0e6e3c6e0c48ac66 908 ProSitePatterns PS00447 DNA polymerase family A signature. 734 753 - T 13-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN78_01400 53fd4a3dcbe17f57d6c41c13b9434398 784 PIRSF PIRSF000144 1 768 0.0 T 13-10-2018 BEN78_01400 53fd4a3dcbe17f57d6c41c13b9434398 784 Gene3D G3DSA:3.40.50.740 121 491 1.3E-67 T 13-10-2018 BEN78_01400 53fd4a3dcbe17f57d6c41c13b9434398 784 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 13 763 7.7E-288 T 13-10-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 BEN78_01400 53fd4a3dcbe17f57d6c41c13b9434398 784 Gene3D G3DSA:3.40.228.10 185 412 1.3E-67 T 13-10-2018 BEN78_01400 53fd4a3dcbe17f57d6c41c13b9434398 784 Pfam PF00384 Molybdopterin oxidoreductase 109 497 2.2E-26 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_01400 53fd4a3dcbe17f57d6c41c13b9434398 784 SUPERFAMILY SSF50692 646 764 3.62E-16 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily BEN78_01400 53fd4a3dcbe17f57d6c41c13b9434398 784 SUPERFAMILY SSF53706 48 634 1.06E-148 T 13-10-2018 BEN78_01400 53fd4a3dcbe17f57d6c41c13b9434398 784 Pfam PF01568 Molydopterin dinucleotide binding domain 650 757 3.3E-9 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 BEN78_02055 ee4def38bc5419bc00ef48af7990e2fb 697 Pfam PF02554 Carbon starvation protein CstA 32 412 1.1E-164 T 13-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 BEN78_02055 ee4def38bc5419bc00ef48af7990e2fb 697 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 469 597 1.4E-35 T 13-10-2018 IPR025299 CstA, C-terminal domain BEN78_06695 94ffd407d08e148d4af1921a97c34bd3 443 PIRSF PIRSF001362 1 440 2.2E-212 T 13-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 BEN78_06695 94ffd407d08e148d4af1921a97c34bd3 443 SUPERFAMILY SSF51621 6 437 7.63E-147 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BEN78_06695 94ffd407d08e148d4af1921a97c34bd3 443 ProSitePatterns PS00161 Isocitrate lyase signature. 196 201 - T 13-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 BEN78_06695 94ffd407d08e148d4af1921a97c34bd3 443 Pfam PF00463 Isocitrate lyase family 259 437 6.1E-51 T 13-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 BEN78_06695 94ffd407d08e148d4af1921a97c34bd3 443 Pfam PF00463 Isocitrate lyase family 13 258 4.0E-61 T 13-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 BEN78_06695 94ffd407d08e148d4af1921a97c34bd3 443 Gene3D G3DSA:3.20.20.60 1 420 1.1E-175 T 13-10-2018 BEN78_06695 94ffd407d08e148d4af1921a97c34bd3 443 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 9 258 2.8E-109 T 13-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 BEN78_06695 94ffd407d08e148d4af1921a97c34bd3 443 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 259 437 8.9E-85 T 13-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 BEN78_15090 72b62b446874f13997ac23565ee6840d 240 Gene3D G3DSA:3.40.50.880 1 229 1.0E-50 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN78_15090 72b62b446874f13997ac23565ee6840d 240 Pfam PF00117 Glutamine amidotransferase class-I 28 182 2.0E-13 T 13-10-2018 IPR017926 Glutamine amidotransferase BEN78_15090 72b62b446874f13997ac23565ee6840d 240 SUPERFAMILY SSF52317 37 228 2.45E-38 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN78_10600 e9b81d3f7efd42f06d2ac6bd2afa0104 411 PIRSF PIRSF001434 4 396 1.2E-134 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BEN78_10600 e9b81d3f7efd42f06d2ac6bd2afa0104 411 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 14 393 1.0E-174 T 13-10-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 BEN78_10600 e9b81d3f7efd42f06d2ac6bd2afa0104 411 Gene3D G3DSA:3.40.640.10 13 257 1.5E-84 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN78_10600 e9b81d3f7efd42f06d2ac6bd2afa0104 411 Gene3D G3DSA:3.90.1150.10 258 397 5.4E-51 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN78_10600 e9b81d3f7efd42f06d2ac6bd2afa0104 411 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 17 392 4.2E-133 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BEN78_10600 e9b81d3f7efd42f06d2ac6bd2afa0104 411 SUPERFAMILY SSF53383 18 393 7.6E-114 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_10600 e9b81d3f7efd42f06d2ac6bd2afa0104 411 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 200 214 - T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BEN78_09725 88788d41e989c61b1b6b9e2a34235157 524 Gene3D G3DSA:3.30.450.20 179 292 2.5E-6 T 13-10-2018 BEN78_09725 88788d41e989c61b1b6b9e2a34235157 524 SUPERFAMILY SSF47384 300 367 9.02E-13 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN78_09725 88788d41e989c61b1b6b9e2a34235157 524 SMART SM00388 303 369 2.4E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_09725 88788d41e989c61b1b6b9e2a34235157 524 Gene3D G3DSA:1.10.287.130 293 368 8.5E-14 T 13-10-2018 BEN78_09725 88788d41e989c61b1b6b9e2a34235157 524 Pfam PF00512 His Kinase A (phospho-acceptor) domain 304 367 1.8E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_09725 88788d41e989c61b1b6b9e2a34235157 524 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 412 516 3.1E-16 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_09725 88788d41e989c61b1b6b9e2a34235157 524 Gene3D G3DSA:3.30.565.10 369 521 2.1E-31 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_09725 88788d41e989c61b1b6b9e2a34235157 524 SMART SM00387 411 519 1.2E-26 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_09725 88788d41e989c61b1b6b9e2a34235157 524 SUPERFAMILY SSF55874 361 516 6.16E-32 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_09725 88788d41e989c61b1b6b9e2a34235157 524 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 464 6.4E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_09725 88788d41e989c61b1b6b9e2a34235157 524 PRINTS PR00344 Bacterial sensor protein C-terminal signature 503 516 6.4E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_09725 88788d41e989c61b1b6b9e2a34235157 524 PRINTS PR00344 Bacterial sensor protein C-terminal signature 468 478 6.4E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_09725 88788d41e989c61b1b6b9e2a34235157 524 PRINTS PR00344 Bacterial sensor protein C-terminal signature 479 497 6.4E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_08225 d36e8381513e8fccd5431b6adb11917c 224 Pfam PF00072 Response regulator receiver domain 5 116 1.8E-15 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_08225 d36e8381513e8fccd5431b6adb11917c 224 SMART SM00448 3 116 2.2E-16 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_08225 d36e8381513e8fccd5431b6adb11917c 224 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_08225 d36e8381513e8fccd5431b6adb11917c 224 SUPERFAMILY SSF52172 2 130 7.12E-23 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_08225 d36e8381513e8fccd5431b6adb11917c 224 SMART SM00421 147 204 6.4E-21 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_08225 d36e8381513e8fccd5431b6adb11917c 224 Gene3D G3DSA:3.40.50.12740 3 209 1.7E-51 T 13-10-2018 BEN78_08225 d36e8381513e8fccd5431b6adb11917c 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 1.3E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_08225 d36e8381513e8fccd5431b6adb11917c 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 1.3E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_08225 d36e8381513e8fccd5431b6adb11917c 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 1.3E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_08225 d36e8381513e8fccd5431b6adb11917c 224 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 204 2.1E-17 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_08225 d36e8381513e8fccd5431b6adb11917c 224 SUPERFAMILY SSF46894 139 209 1.67E-20 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BEN78_11255 c08320d775408991b017ce854901304f 328 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 154 4.7E-36 T 13-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 BEN78_11255 c08320d775408991b017ce854901304f 328 SUPERFAMILY SSF56327 159 327 6.64E-59 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 BEN78_11255 c08320d775408991b017ce854901304f 328 Gene3D G3DSA:3.40.50.720 1 156 1.7E-59 T 13-10-2018 BEN78_11255 c08320d775408991b017ce854901304f 328 Hamap MF_01517 Malate dehydrogenase [mdh]. 1 327 55.816 T 13-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 BEN78_11255 c08320d775408991b017ce854901304f 328 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 159 321 7.4E-30 T 13-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 BEN78_11255 c08320d775408991b017ce854901304f 328 Gene3D G3DSA:3.90.110.10 157 328 1.7E-62 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 BEN78_11255 c08320d775408991b017ce854901304f 328 SUPERFAMILY SSF51735 3 157 1.56E-44 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_11255 c08320d775408991b017ce854901304f 328 PIRSF PIRSF000102 1 325 4.0E-65 T 13-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 BEN78_11255 c08320d775408991b017ce854901304f 328 TIGRFAM TIGR01759 MalateDH-SF1: malate dehydrogenase 2 321 1.0E-141 T 13-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 BEN78_13980 9e1d3ce8b35809c80d4edd21ce90346f 1059 SUPERFAMILY SSF82866 792 1030 9.42E-42 T 13-10-2018 BEN78_13980 9e1d3ce8b35809c80d4edd21ce90346f 1059 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.3E-74 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_13980 9e1d3ce8b35809c80d4edd21ce90346f 1059 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.3E-74 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_13980 9e1d3ce8b35809c80d4edd21ce90346f 1059 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.3E-74 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_13980 9e1d3ce8b35809c80d4edd21ce90346f 1059 PRINTS PR00702 Acriflavin resistance protein family signature 610 624 1.3E-74 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_13980 9e1d3ce8b35809c80d4edd21ce90346f 1059 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.3E-74 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_13980 9e1d3ce8b35809c80d4edd21ce90346f 1059 PRINTS PR00702 Acriflavin resistance protein family signature 543 560 1.3E-74 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_13980 9e1d3ce8b35809c80d4edd21ce90346f 1059 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.3E-74 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_13980 9e1d3ce8b35809c80d4edd21ce90346f 1059 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.3E-74 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_13980 9e1d3ce8b35809c80d4edd21ce90346f 1059 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.3E-74 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_13980 9e1d3ce8b35809c80d4edd21ce90346f 1059 Gene3D G3DSA:3.30.70.1440 656 851 3.9E-288 T 13-10-2018 BEN78_13980 9e1d3ce8b35809c80d4edd21ce90346f 1059 Gene3D G3DSA:3.30.2090.10 178 268 3.9E-288 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN78_13980 9e1d3ce8b35809c80d4edd21ce90346f 1059 Gene3D G3DSA:1.20.1640.10 10 503 3.9E-288 T 13-10-2018 BEN78_13980 9e1d3ce8b35809c80d4edd21ce90346f 1059 Gene3D G3DSA:1.20.1640.10 504 1025 3.9E-288 T 13-10-2018 BEN78_13980 9e1d3ce8b35809c80d4edd21ce90346f 1059 SUPERFAMILY SSF82693 137 324 9.42E-18 T 13-10-2018 BEN78_13980 9e1d3ce8b35809c80d4edd21ce90346f 1059 Gene3D G3DSA:3.30.70.1430 558 655 3.9E-288 T 13-10-2018 BEN78_13980 9e1d3ce8b35809c80d4edd21ce90346f 1059 Gene3D G3DSA:3.30.70.1320 134 326 3.9E-288 T 13-10-2018 BEN78_13980 9e1d3ce8b35809c80d4edd21ce90346f 1059 SUPERFAMILY SSF82693 42 128 6.8E-20 T 13-10-2018 BEN78_13980 9e1d3ce8b35809c80d4edd21ce90346f 1059 Pfam PF00873 AcrB/AcrD/AcrF family 4 1028 4.1E-257 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_13980 9e1d3ce8b35809c80d4edd21ce90346f 1059 SUPERFAMILY SSF82693 556 657 1.83E-18 T 13-10-2018 BEN78_13980 9e1d3ce8b35809c80d4edd21ce90346f 1059 Gene3D G3DSA:3.30.70.1430 40 802 3.9E-288 T 13-10-2018 BEN78_13980 9e1d3ce8b35809c80d4edd21ce90346f 1059 Gene3D G3DSA:3.30.2090.10 706 794 3.9E-288 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN78_13980 9e1d3ce8b35809c80d4edd21ce90346f 1059 SUPERFAMILY SSF82866 289 490 1.96E-50 T 13-10-2018 BEN78_13980 9e1d3ce8b35809c80d4edd21ce90346f 1059 SUPERFAMILY SSF82714 707 792 8.11E-17 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN78_13980 9e1d3ce8b35809c80d4edd21ce90346f 1059 SUPERFAMILY SSF82714 183 265 3.14E-18 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN78_01305 acbb5401bcf445533319b86b8c550d86 377 TIGRFAM TIGR02226 two_anch: N-terminal double-transmembrane domain 5 80 5.9E-18 T 13-10-2018 IPR011933 Double transmembrane domain BEN78_01305 acbb5401bcf445533319b86b8c550d86 377 Pfam PF07584 Aerotolerance regulator N-terminal 4 77 3.5E-9 T 13-10-2018 IPR024163 Aerotolerance regulator, N-terminal BEN78_07420 a2e93717c235a4e5a8ca0bfb587bc905 173 SUPERFAMILY SSF88946 4 92 1.22E-14 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BEN78_07420 a2e93717c235a4e5a8ca0bfb587bc905 173 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 166 3.6E-26 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BEN78_07420 a2e93717c235a4e5a8ca0bfb587bc905 173 Gene3D G3DSA:1.10.1740.10 1 104 2.2E-12 T 13-10-2018 BEN78_07420 a2e93717c235a4e5a8ca0bfb587bc905 173 Gene3D G3DSA:1.10.10.10 108 173 1.6E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_07420 a2e93717c235a4e5a8ca0bfb587bc905 173 SUPERFAMILY SSF88659 109 171 4.58E-16 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN78_07420 a2e93717c235a4e5a8ca0bfb587bc905 173 Pfam PF08281 Sigma-70, region 4 114 166 1.2E-17 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BEN78_07420 a2e93717c235a4e5a8ca0bfb587bc905 173 Pfam PF04542 Sigma-70 region 2 12 80 1.5E-11 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BEN78_09690 0889e9d82703e2c0f69a799059f07338 1686 SUPERFAMILY SSF51126 690 933 2.92E-6 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor BEN78_09690 0889e9d82703e2c0f69a799059f07338 1686 SUPERFAMILY SSF51126 418 694 6.28E-26 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor BEN78_09690 0889e9d82703e2c0f69a799059f07338 1686 Gene3D G3DSA:2.160.20.20 452 623 2.3E-5 T 13-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily BEN78_09690 0889e9d82703e2c0f69a799059f07338 1686 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 1.5E-4 T 13-10-2018 IPR024973 ESPR domain BEN78_09690 0889e9d82703e2c0f69a799059f07338 1686 SUPERFAMILY SSF103515 1384 1686 3.4E-36 T 13-10-2018 IPR036709 Autotransporter beta-domain superfamily BEN78_09690 0889e9d82703e2c0f69a799059f07338 1686 Gene3D G3DSA:2.160.20.20 1189 1368 3.5E-36 T 13-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily BEN78_09690 0889e9d82703e2c0f69a799059f07338 1686 Pfam PF03797 Autotransporter beta-domain 1422 1660 2.7E-40 T 13-10-2018 IPR005546 Autotransporter beta-domain BEN78_09690 0889e9d82703e2c0f69a799059f07338 1686 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 578 609 1.3E-8 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09690 0889e9d82703e2c0f69a799059f07338 1686 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 375 405 3.0E-10 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09690 0889e9d82703e2c0f69a799059f07338 1686 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 511 541 2.7E-7 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09690 0889e9d82703e2c0f69a799059f07338 1686 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 883 913 2.2E-10 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09690 0889e9d82703e2c0f69a799059f07338 1686 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1109 1139 1.3E-10 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09690 0889e9d82703e2c0f69a799059f07338 1686 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 972 1003 6.4E-12 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09690 0889e9d82703e2c0f69a799059f07338 1686 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1045 1071 1.9E-9 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09690 0889e9d82703e2c0f69a799059f07338 1686 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 442 473 1.8E-6 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09690 0889e9d82703e2c0f69a799059f07338 1686 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1178 1206 6.0E-6 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09690 0889e9d82703e2c0f69a799059f07338 1686 Pfam PF12951 Passenger-associated-transport-repeat 885 913 2.2E-9 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09690 0889e9d82703e2c0f69a799059f07338 1686 Pfam PF12951 Passenger-associated-transport-repeat 1109 1138 3.3E-9 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09690 0889e9d82703e2c0f69a799059f07338 1686 Pfam PF12951 Passenger-associated-transport-repeat 1041 1070 1.9E-8 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09690 0889e9d82703e2c0f69a799059f07338 1686 Pfam PF12951 Passenger-associated-transport-repeat 1179 1205 0.0015 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09690 0889e9d82703e2c0f69a799059f07338 1686 Pfam PF12951 Passenger-associated-transport-repeat 376 404 3.1E-9 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09690 0889e9d82703e2c0f69a799059f07338 1686 Pfam PF12951 Passenger-associated-transport-repeat 973 1002 2.6E-11 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09690 0889e9d82703e2c0f69a799059f07338 1686 Pfam PF12951 Passenger-associated-transport-repeat 580 608 2.7E-6 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09690 0889e9d82703e2c0f69a799059f07338 1686 Pfam PF12951 Passenger-associated-transport-repeat 443 472 9.8E-4 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09690 0889e9d82703e2c0f69a799059f07338 1686 Pfam PF12951 Passenger-associated-transport-repeat 512 540 7.1E-6 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09690 0889e9d82703e2c0f69a799059f07338 1686 Gene3D G3DSA:2.40.128.130 1369 1686 4.9E-55 T 13-10-2018 IPR036709 Autotransporter beta-domain superfamily BEN78_09690 0889e9d82703e2c0f69a799059f07338 1686 SMART SM00869 1411 1670 3.0E-28 T 13-10-2018 IPR005546 Autotransporter beta-domain BEN78_09690 0889e9d82703e2c0f69a799059f07338 1686 SUPERFAMILY SSF51126 1148 1366 5.96E-28 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor BEN78_09690 0889e9d82703e2c0f69a799059f07338 1686 SUPERFAMILY SSF51126 926 1161 1.13E-22 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor BEN78_01165 17ac7b92a4c78fde50c250cb3c514e02 554 Gene3D G3DSA:3.40.50.880 289 546 7.1E-94 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN78_01165 17ac7b92a4c78fde50c250cb3c514e02 554 Pfam PF00117 Glutamine amidotransferase class-I 304 537 8.6E-51 T 13-10-2018 IPR017926 Glutamine amidotransferase BEN78_01165 17ac7b92a4c78fde50c250cb3c514e02 554 Pfam PF06418 CTP synthase N-terminus 5 265 2.0E-123 T 13-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 BEN78_01165 17ac7b92a4c78fde50c250cb3c514e02 554 TIGRFAM TIGR00337 PyrG: CTP synthase 4 538 1.3E-236 T 13-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 BEN78_01165 17ac7b92a4c78fde50c250cb3c514e02 554 SUPERFAMILY SSF52540 3 268 1.21E-119 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_01165 17ac7b92a4c78fde50c250cb3c514e02 554 Gene3D G3DSA:3.40.50.300 2 286 2.2E-127 T 13-10-2018 BEN78_01165 17ac7b92a4c78fde50c250cb3c514e02 554 SUPERFAMILY SSF52317 291 542 6.62E-79 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN78_01165 17ac7b92a4c78fde50c250cb3c514e02 554 Hamap MF_01227 CTP synthase [pyrG]. 2 543 50.622 T 13-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 BEN78_07000 8492ecdeaec787616700ecbaa8e6963a 181 ProSitePatterns PS00460 Glutathione peroxidases active site. 25 40 - T 13-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 BEN78_07000 8492ecdeaec787616700ecbaa8e6963a 181 Pfam PF00255 Glutathione peroxidase 11 111 1.6E-33 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 BEN78_07000 8492ecdeaec787616700ecbaa8e6963a 181 PRINTS PR01011 Glutathione peroxidase family signature 58 74 3.6E-18 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 BEN78_07000 8492ecdeaec787616700ecbaa8e6963a 181 PRINTS PR01011 Glutathione peroxidase family signature 141 150 3.6E-18 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 BEN78_07000 8492ecdeaec787616700ecbaa8e6963a 181 PRINTS PR01011 Glutathione peroxidase family signature 23 40 3.6E-18 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 BEN78_07000 8492ecdeaec787616700ecbaa8e6963a 181 Gene3D G3DSA:3.40.30.10 2 181 8.2E-55 T 13-10-2018 BEN78_07000 8492ecdeaec787616700ecbaa8e6963a 181 SUPERFAMILY SSF52833 6 179 6.02E-53 T 13-10-2018 IPR036249 Thioredoxin-like superfamily BEN78_07000 8492ecdeaec787616700ecbaa8e6963a 181 PIRSF PIRSF000303 1 181 5.9E-56 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 BEN78_11180 f9a64fc54e30259d0fa70d076e1b39fc 144 SUPERFAMILY SSF52080 5 143 1.83E-38 T 13-10-2018 IPR036227 Ribosomal L18e/L15P superfamily BEN78_11180 f9a64fc54e30259d0fa70d076e1b39fc 144 Gene3D G3DSA:3.100.10.10 71 144 7.3E-14 T 13-10-2018 BEN78_11180 f9a64fc54e30259d0fa70d076e1b39fc 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 9.0E-42 T 13-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_11180 f9a64fc54e30259d0fa70d076e1b39fc 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 17.557 T 13-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 BEN78_11180 f9a64fc54e30259d0fa70d076e1b39fc 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 6.6E-26 T 13-10-2018 IPR021131 Ribosomal protein L18e/L15P BEN78_13445 6d29fa5d88db1053abb5b0f834ab501a 471 Gene3D G3DSA:3.40.50.720 5 416 2.3E-146 T 13-10-2018 BEN78_13445 6d29fa5d88db1053abb5b0f834ab501a 471 SUPERFAMILY SSF55347 168 461 2.55E-94 T 13-10-2018 BEN78_13445 6d29fa5d88db1053abb5b0f834ab501a 471 Gene3D G3DSA:3.30.360.10 163 455 2.3E-146 T 13-10-2018 BEN78_13445 6d29fa5d88db1053abb5b0f834ab501a 471 PIRSF PIRSF000110 1 468 3.4E-153 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BEN78_13445 6d29fa5d88db1053abb5b0f834ab501a 471 SUPERFAMILY SSF51735 4 176 6.24E-49 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_13445 6d29fa5d88db1053abb5b0f834ab501a 471 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 153 181 3.1E-43 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BEN78_13445 6d29fa5d88db1053abb5b0f834ab501a 471 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 308 334 3.1E-43 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BEN78_13445 6d29fa5d88db1053abb5b0f834ab501a 471 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 129 142 3.1E-43 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BEN78_13445 6d29fa5d88db1053abb5b0f834ab501a 471 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 223 239 3.1E-43 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BEN78_13445 6d29fa5d88db1053abb5b0f834ab501a 471 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 205 222 3.1E-43 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BEN78_13445 6d29fa5d88db1053abb5b0f834ab501a 471 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 2 468 70.609 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BEN78_13445 6d29fa5d88db1053abb5b0f834ab501a 471 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 7 173 3.1E-48 T 13-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BEN78_13445 6d29fa5d88db1053abb5b0f834ab501a 471 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 175 459 5.4E-91 T 13-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BEN78_13445 6d29fa5d88db1053abb5b0f834ab501a 471 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 4 462 1.5E-142 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BEN78_09110 839c77312d9439646a6324bc67209d60 240 Gene3D G3DSA:3.90.1680.10 3 217 6.4E-40 T 13-10-2018 IPR036590 SOS response associated peptidase-like BEN78_09110 839c77312d9439646a6324bc67209d60 240 Pfam PF02586 SOS response associated peptidase (SRAP) 28 205 2.6E-34 T 13-10-2018 IPR003738 SOS response associated peptidase (SRAP) BEN78_09110 839c77312d9439646a6324bc67209d60 240 SUPERFAMILY SSF143081 23 216 1.83E-38 T 13-10-2018 IPR036590 SOS response associated peptidase-like BEN78_15375 edf9cc7687817ad2317af5d6a6b100ee 450 Gene3D G3DSA:2.30.40.10 6 432 1.4E-130 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BEN78_15375 edf9cc7687817ad2317af5d6a6b100ee 450 SUPERFAMILY SSF51556 56 378 4.99E-89 T 13-10-2018 IPR032466 Metal-dependent hydrolase BEN78_15375 edf9cc7687817ad2317af5d6a6b100ee 450 Gene3D G3DSA:3.20.20.140 57 417 1.4E-130 T 13-10-2018 BEN78_15375 edf9cc7687817ad2317af5d6a6b100ee 450 SUPERFAMILY SSF51338 1 441 9.26E-29 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BEN78_15375 edf9cc7687817ad2317af5d6a6b100ee 450 ProSitePatterns PS00483 Dihydroorotase signature 2. 314 325 - T 13-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN78_15375 edf9cc7687817ad2317af5d6a6b100ee 450 Pfam PF01979 Amidohydrolase family 53 430 6.0E-16 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BEN78_14190 7abf4a0b2a84571803504978760d3030 134 Pfam PF01475 Ferric uptake regulator family 8 129 7.4E-43 T 13-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 BEN78_14190 7abf4a0b2a84571803504978760d3030 134 Gene3D G3DSA:3.30.1490.190 85 134 4.6E-17 T 13-10-2018 BEN78_14190 7abf4a0b2a84571803504978760d3030 134 Gene3D G3DSA:1.10.10.10 1 82 2.4E-33 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_14190 7abf4a0b2a84571803504978760d3030 134 SUPERFAMILY SSF46785 6 130 3.86E-38 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_03175 8ba35eba607e05820d6375ddd6303d20 631 Pfam PF01343 Peptidase family S49 400 551 2.0E-45 T 13-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 BEN78_03175 8ba35eba607e05820d6375ddd6303d20 631 Pfam PF01343 Peptidase family S49 144 297 1.2E-19 T 13-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 BEN78_03175 8ba35eba607e05820d6375ddd6303d20 631 Gene3D G3DSA:3.90.226.10 100 323 2.6E-154 T 13-10-2018 BEN78_03175 8ba35eba607e05820d6375ddd6303d20 631 PIRSF PIRSF001217 12 630 2.1E-189 T 13-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 BEN78_03175 8ba35eba607e05820d6375ddd6303d20 631 SUPERFAMILY SSF52096 327 537 1.49E-37 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BEN78_03175 8ba35eba607e05820d6375ddd6303d20 631 Gene3D G3DSA:3.90.226.10 327 549 2.6E-154 T 13-10-2018 BEN78_03175 8ba35eba607e05820d6375ddd6303d20 631 SUPERFAMILY SSF52096 61 291 2.05E-20 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BEN78_03175 8ba35eba607e05820d6375ddd6303d20 631 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 359 549 1.2E-49 T 13-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 BEN78_03175 8ba35eba607e05820d6375ddd6303d20 631 Gene3D G3DSA:3.40.1750.10 192 507 2.6E-154 T 13-10-2018 BEN78_03175 8ba35eba607e05820d6375ddd6303d20 631 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 20 578 2.9E-150 T 13-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 BEN78_03605 13dcf83c89be3b9397ce7bf9e9aa19e4 311 Pfam PF00753 Metallo-beta-lactamase superfamily 20 217 5.0E-21 T 13-10-2018 IPR001279 Metallo-beta-lactamase BEN78_03605 13dcf83c89be3b9397ce7bf9e9aa19e4 311 SMART SM00849 20 225 7.6E-26 T 13-10-2018 IPR001279 Metallo-beta-lactamase BEN78_03605 13dcf83c89be3b9397ce7bf9e9aa19e4 311 Gene3D G3DSA:3.60.15.10 5 273 2.9E-56 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN78_03605 13dcf83c89be3b9397ce7bf9e9aa19e4 311 SUPERFAMILY SSF56281 2 243 4.19E-48 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN78_11055 71ad763c1fea0c96ccb44da3b0f74aca 1425 SMART SM00663 235 514 9.7E-184 T 13-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN78_11055 71ad763c1fea0c96ccb44da3b0f74aca 1425 Gene3D G3DSA:1.10.150.390 1316 1374 1.6E-27 T 13-10-2018 BEN78_11055 71ad763c1fea0c96ccb44da3b0f74aca 1425 Pfam PF04997 RNA polymerase Rpb1, domain 1 17 342 2.5E-85 T 13-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN78_11055 71ad763c1fea0c96ccb44da3b0f74aca 1425 Gene3D G3DSA:1.10.1790.20 1136 1314 5.0E-63 T 13-10-2018 BEN78_11055 71ad763c1fea0c96ccb44da3b0f74aca 1425 Gene3D G3DSA:2.40.50.100 1152 1215 5.0E-63 T 13-10-2018 BEN78_11055 71ad763c1fea0c96ccb44da3b0f74aca 1425 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 395 4.0E-8 T 13-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN78_11055 71ad763c1fea0c96ccb44da3b0f74aca 1425 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 2.7E-27 T 13-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN78_11055 71ad763c1fea0c96ccb44da3b0f74aca 1425 Gene3D G3DSA:2.40.50.100 1024 1127 2.8E-27 T 13-10-2018 BEN78_11055 71ad763c1fea0c96ccb44da3b0f74aca 1425 Gene3D G3DSA:1.10.40.90 374 416 6.6E-22 T 13-10-2018 BEN78_11055 71ad763c1fea0c96ccb44da3b0f74aca 1425 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1366 0.0 T 13-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN78_11055 71ad763c1fea0c96ccb44da3b0f74aca 1425 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 759 3.4E-18 T 13-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN78_11055 71ad763c1fea0c96ccb44da3b0f74aca 1425 Gene3D G3DSA:1.10.274.100 490 640 7.5E-40 T 13-10-2018 BEN78_11055 71ad763c1fea0c96ccb44da3b0f74aca 1425 SUPERFAMILY SSF64484 16 1366 0.0 T 13-10-2018 BEN78_11055 71ad763c1fea0c96ccb44da3b0f74aca 1425 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1315 7.1E-77 T 13-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN78_11055 71ad763c1fea0c96ccb44da3b0f74aca 1425 Gene3D G3DSA:1.10.132.30 641 790 2.5E-63 T 13-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN78_11055 71ad763c1fea0c96ccb44da3b0f74aca 1425 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1374 18.897 T 13-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN78_11055 71ad763c1fea0c96ccb44da3b0f74aca 1425 Gene3D G3DSA:2.40.50.100 949 1023 2.9E-27 T 13-10-2018 BEN78_11055 71ad763c1fea0c96ccb44da3b0f74aca 1425 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 2.1E-26 T 13-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN78_09185 241b540f41a7cb55013fcddc9a2690b5 771 Gene3D G3DSA:2.60.40.1250 12 148 5.5E-36 T 13-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily BEN78_09185 241b540f41a7cb55013fcddc9a2690b5 771 Gene3D G3DSA:2.60.40.1250 171 312 1.7E-35 T 13-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily BEN78_09185 241b540f41a7cb55013fcddc9a2690b5 771 Pfam PF11412 Disulphide bond corrector protein DsbC 19 134 6.2E-30 T 13-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain BEN78_09185 241b540f41a7cb55013fcddc9a2690b5 771 Pfam PF11412 Disulphide bond corrector protein DsbC 177 293 7.9E-32 T 13-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain BEN78_09185 241b540f41a7cb55013fcddc9a2690b5 771 ProSitePatterns PS00194 Thioredoxin family active site. 676 694 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 BEN78_09185 241b540f41a7cb55013fcddc9a2690b5 771 Gene3D G3DSA:3.40.30.10 650 766 1.2E-10 T 13-10-2018 BEN78_09185 241b540f41a7cb55013fcddc9a2690b5 771 SUPERFAMILY SSF74863 18 134 1.96E-30 T 13-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily BEN78_09185 241b540f41a7cb55013fcddc9a2690b5 771 SUPERFAMILY SSF74863 176 293 1.96E-29 T 13-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily BEN78_09185 241b540f41a7cb55013fcddc9a2690b5 771 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 374 552 3.7E-10 T 13-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 BEN78_09185 241b540f41a7cb55013fcddc9a2690b5 771 SUPERFAMILY SSF52833 667 759 2.84E-11 T 13-10-2018 IPR036249 Thioredoxin-like superfamily BEN78_09185 241b540f41a7cb55013fcddc9a2690b5 771 Pfam PF13899 Thioredoxin-like 662 741 3.1E-13 T 13-10-2018 BEN78_02120 1bacd5dfbb6c45b7156657c342c982c4 332 Pfam PF00348 Polyprenyl synthetase 42 273 3.7E-77 T 13-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 BEN78_02120 1bacd5dfbb6c45b7156657c342c982c4 332 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site BEN78_02120 1bacd5dfbb6c45b7156657c342c982c4 332 Gene3D G3DSA:1.10.600.10 2 331 5.2E-107 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily BEN78_02120 1bacd5dfbb6c45b7156657c342c982c4 332 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 91 105 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site BEN78_02120 1bacd5dfbb6c45b7156657c342c982c4 332 SUPERFAMILY SSF48576 16 331 5.76E-96 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily BEN78_04250 cddea1d9c6d721ea12feb3ad391527f4 209 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 30 40 - T 13-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 BEN78_04250 cddea1d9c6d721ea12feb3ad391527f4 209 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 32 192 2.6E-23 T 13-10-2018 IPR013830 SGNH hydrolase-type esterase domain BEN78_04250 cddea1d9c6d721ea12feb3ad391527f4 209 Gene3D G3DSA:3.40.50.1110 28 208 1.0E-64 T 13-10-2018 IPR036514 SGNH hydrolase superfamily BEN78_04250 cddea1d9c6d721ea12feb3ad391527f4 209 SUPERFAMILY SSF52266 26 207 7.94E-46 T 13-10-2018 BEN78_09875 e30719a6f1bb730527e37e6ab155cd61 723 Gene3D G3DSA:3.30.70.260 646 723 1.6E-13 T 13-10-2018 BEN78_09875 e30719a6f1bb730527e37e6ab155cd61 723 SMART SM00471 60 172 2.0E-10 T 13-10-2018 IPR003607 HD/PDEase domain BEN78_09875 e30719a6f1bb730527e37e6ab155cd61 723 Gene3D G3DSA:1.10.3210.10 23 209 1.9E-76 T 13-10-2018 BEN78_09875 e30719a6f1bb730527e37e6ab155cd61 723 Gene3D G3DSA:3.10.20.30 400 473 8.8E-30 T 13-10-2018 IPR012675 Beta-grasp domain superfamily BEN78_09875 e30719a6f1bb730527e37e6ab155cd61 723 Pfam PF13328 HD domain 45 194 3.2E-50 T 13-10-2018 IPR003607 HD/PDEase domain BEN78_09875 e30719a6f1bb730527e37e6ab155cd61 723 Pfam PF02824 TGS domain 407 466 2.1E-18 T 13-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 BEN78_09875 e30719a6f1bb730527e37e6ab155cd61 723 SUPERFAMILY SSF81301 200 411 6.54E-58 T 13-10-2018 BEN78_09875 e30719a6f1bb730527e37e6ab155cd61 723 Gene3D G3DSA:3.30.460.10 212 344 1.6E-41 T 13-10-2018 BEN78_09875 e30719a6f1bb730527e37e6ab155cd61 723 SMART SM00954 254 364 7.5E-58 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 BEN78_09875 e30719a6f1bb730527e37e6ab155cd61 723 SUPERFAMILY SSF55021 651 722 4.96E-8 T 13-10-2018 BEN78_09875 e30719a6f1bb730527e37e6ab155cd61 723 SUPERFAMILY SSF81271 394 466 9.16E-21 T 13-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 BEN78_09875 e30719a6f1bb730527e37e6ab155cd61 723 SUPERFAMILY SSF109604 28 210 2.89E-70 T 13-10-2018 BEN78_09875 e30719a6f1bb730527e37e6ab155cd61 723 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 45 718 8.3E-226 T 13-10-2018 IPR004811 RelA/SpoT family GO:0015969 BEN78_09875 e30719a6f1bb730527e37e6ab155cd61 723 Pfam PF04607 Region found in RelA / SpoT proteins 254 364 1.5E-32 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 BEN78_09875 e30719a6f1bb730527e37e6ab155cd61 723 Pfam PF13291 ACT domain 647 722 1.3E-14 T 13-10-2018 IPR002912 ACT domain BEN78_12070 295c7e8423675e1067422003a852ac59 440 Gene3D G3DSA:3.30.460.10 11 169 1.6E-58 T 13-10-2018 BEN78_12070 295c7e8423675e1067422003a852ac59 440 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 15 436 3.4E-150 T 13-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 BEN78_12070 295c7e8423675e1067422003a852ac59 440 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 200 262 1.5E-20 T 13-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 BEN78_12070 295c7e8423675e1067422003a852ac59 440 SUPERFAMILY SSF81301 19 170 2.07E-39 T 13-10-2018 BEN78_12070 295c7e8423675e1067422003a852ac59 440 Gene3D G3DSA:1.10.3090.10 171 413 3.5E-83 T 13-10-2018 BEN78_12070 295c7e8423675e1067422003a852ac59 440 Pfam PF12626 Polymerase A arginine-rich C-terminus 317 435 9.0E-34 T 13-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain BEN78_12070 295c7e8423675e1067422003a852ac59 440 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 5 436 37.804 T 13-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 BEN78_12070 295c7e8423675e1067422003a852ac59 440 Pfam PF01743 Poly A polymerase head domain 45 173 4.5E-35 T 13-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 BEN78_12070 295c7e8423675e1067422003a852ac59 440 SUPERFAMILY SSF81891 171 406 2.88E-46 T 13-10-2018 BEN78_08120 58ddbc057e7c5161d71b8f2584db08d7 133 Pfam PF09722 Protein of unknown function (DUF2384) 79 131 8.3E-9 T 13-10-2018 IPR024467 Domain of unknown function DUF2384 BEN78_08120 58ddbc057e7c5161d71b8f2584db08d7 133 ProDom PD080812 PLASMID Y4OB BMEII097 AGR_L_107P MLL2216 BMEII0977 ATU4831 21 128 3.0E-32 T 13-10-2018 IPR020358 Uncharacterised protein family Y4oB BEN78_09930 522bf452b03d338900619c48eae6fb7f 834 Gene3D G3DSA:3.40.710.10 647 820 4.0E-35 T 13-10-2018 BEN78_09930 522bf452b03d338900619c48eae6fb7f 834 Gene3D G3DSA:3.40.710.10 419 618 1.4E-68 T 13-10-2018 BEN78_09930 522bf452b03d338900619c48eae6fb7f 834 Gene3D G3DSA:1.10.3810.10 46 242 1.2E-68 T 13-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN78_09930 522bf452b03d338900619c48eae6fb7f 834 Pfam PF17092 Penicillin-binding protein OB-like domain 319 429 4.1E-9 T 13-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN78_09930 522bf452b03d338900619c48eae6fb7f 834 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 63 767 3.2E-175 T 13-10-2018 BEN78_09930 522bf452b03d338900619c48eae6fb7f 834 Pfam PF00912 Transglycosylase 53 229 5.0E-57 T 13-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN78_09930 522bf452b03d338900619c48eae6fb7f 834 Pfam PF00905 Penicillin binding protein transpeptidase domain 433 610 2.9E-22 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BEN78_09930 522bf452b03d338900619c48eae6fb7f 834 SUPERFAMILY SSF56601 210 810 1.75E-122 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BEN78_09930 522bf452b03d338900619c48eae6fb7f 834 Gene3D G3DSA:3.40.710.10 243 352 1.2E-9 T 13-10-2018 BEN78_09930 522bf452b03d338900619c48eae6fb7f 834 SUPERFAMILY SSF53955 41 256 8.72E-70 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily BEN78_05850 c6188c522b6161dea3e03d0cac03c7f0 335 Gene3D G3DSA:3.40.50.300 1 245 1.0E-78 T 13-10-2018 BEN78_05850 c6188c522b6161dea3e03d0cac03c7f0 335 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN78_05850 c6188c522b6161dea3e03d0cac03c7f0 335 SUPERFAMILY SSF52540 1 240 1.36E-83 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_05850 c6188c522b6161dea3e03d0cac03c7f0 335 Gene3D G3DSA:3.30.70.260 246 334 1.9E-12 T 13-10-2018 BEN78_05850 c6188c522b6161dea3e03d0cac03c7f0 335 Pfam PF00005 ABC transporter 21 169 9.8E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_05850 c6188c522b6161dea3e03d0cac03c7f0 335 Pfam PF09383 NIL domain 262 332 1.6E-17 T 13-10-2018 IPR018449 NIL domain BEN78_05850 c6188c522b6161dea3e03d0cac03c7f0 335 SMART SM00382 30 217 1.2E-18 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_05850 c6188c522b6161dea3e03d0cac03c7f0 335 SUPERFAMILY SSF55021 260 333 6.87E-15 T 13-10-2018 BEN78_05850 c6188c522b6161dea3e03d0cac03c7f0 335 SMART SM00930 260 333 1.4E-20 T 13-10-2018 IPR018449 NIL domain BEN78_05565 175296ab46b5b8387133646b1812ffd0 401 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 271 286 2.4E-39 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BEN78_05565 175296ab46b5b8387133646b1812ffd0 401 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 301 322 2.4E-39 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BEN78_05565 175296ab46b5b8387133646b1812ffd0 401 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 207 225 2.4E-39 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BEN78_05565 175296ab46b5b8387133646b1812ffd0 401 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 11 33 2.4E-39 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BEN78_05565 175296ab46b5b8387133646b1812ffd0 401 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 227 244 2.4E-39 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BEN78_05565 175296ab46b5b8387133646b1812ffd0 401 Pfam PF01312 FlhB HrpN YscU SpaS Family 9 345 3.7E-115 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BEN78_05565 175296ab46b5b8387133646b1812ffd0 401 Gene3D G3DSA:3.40.1690.10 216 355 1.9E-53 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal BEN78_05565 175296ab46b5b8387133646b1812ffd0 401 SUPERFAMILY SSF160544 243 349 7.06E-36 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal BEN78_05565 175296ab46b5b8387133646b1812ffd0 401 TIGRFAM TIGR01404 FlhB_rel_III: type III secretion protein, YscU/HrpY family 8 347 2.6E-104 T 13-10-2018 IPR006307 Type III exporter system, secretion apparatus protein BsaZ GO:0009306|GO:0016021 BEN78_09405 9c9358ac9b09cef61cba48a9d7864419 753 PRINTS PR00811 Bacterial general secretion pathway protein D signature 558 582 2.1E-12 T 13-10-2018 IPR001775 GspD/PilQ family BEN78_09405 9c9358ac9b09cef61cba48a9d7864419 753 PRINTS PR00811 Bacterial general secretion pathway protein D signature 714 728 2.1E-12 T 13-10-2018 IPR001775 GspD/PilQ family BEN78_09405 9c9358ac9b09cef61cba48a9d7864419 753 PRINTS PR00811 Bacterial general secretion pathway protein D signature 481 491 2.1E-12 T 13-10-2018 IPR001775 GspD/PilQ family BEN78_09405 9c9358ac9b09cef61cba48a9d7864419 753 PRINTS PR00811 Bacterial general secretion pathway protein D signature 691 709 2.1E-12 T 13-10-2018 IPR001775 GspD/PilQ family BEN78_09405 9c9358ac9b09cef61cba48a9d7864419 753 Pfam PF03958 Bacterial type II/III secretion system short domain 334 481 3.0E-10 T 13-10-2018 IPR005644 NolW-like BEN78_09405 9c9358ac9b09cef61cba48a9d7864419 753 Pfam PF03958 Bacterial type II/III secretion system short domain 194 252 1.2E-7 T 13-10-2018 IPR005644 NolW-like BEN78_09405 9c9358ac9b09cef61cba48a9d7864419 753 Pfam PF03958 Bacterial type II/III secretion system short domain 259 327 2.0E-6 T 13-10-2018 IPR005644 NolW-like BEN78_09405 9c9358ac9b09cef61cba48a9d7864419 753 Gene3D G3DSA:3.30.1370.120 94 250 2.0E-28 T 13-10-2018 IPR038591 NolW-like superfamily BEN78_09405 9c9358ac9b09cef61cba48a9d7864419 753 Pfam PF00263 Bacterial type II and III secretion system protein 562 727 1.8E-42 T 13-10-2018 IPR004846 Type II/III secretion system GO:0009306 BEN78_09405 9c9358ac9b09cef61cba48a9d7864419 753 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 672 705 - T 13-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 BEN78_09405 9c9358ac9b09cef61cba48a9d7864419 753 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 97 736 7.9E-162 T 13-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 BEN78_12270 92c4c2cb31435852a2ad427af649b3e5 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 287 8.8E-25 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN78_12270 92c4c2cb31435852a2ad427af649b3e5 297 SUPERFAMILY SSF161098 35 283 4.58E-33 T 13-10-2018 IPR035906 MetI-like superfamily BEN78_12270 92c4c2cb31435852a2ad427af649b3e5 297 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 28 291 3.2E-86 T 13-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 BEN78_12270 92c4c2cb31435852a2ad427af649b3e5 297 Gene3D G3DSA:1.10.3720.10 73 295 3.3E-27 T 13-10-2018 IPR035906 MetI-like superfamily BEN78_11020 a4bb35715feef474533a42cf6c917018 126 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 70 124 1.4E-19 T 13-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 BEN78_11020 a4bb35715feef474533a42cf6c917018 126 Hamap MF_00422 Protein translocase subunit SecE [secE]. 67 122 11.875 T 13-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BEN78_11020 a4bb35715feef474533a42cf6c917018 126 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 71 123 3.4E-18 T 13-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BEN78_11020 a4bb35715feef474533a42cf6c917018 126 PRINTS PR01650 Bacterial translocase SecE signature 66 86 2.3E-12 T 13-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 BEN78_11020 a4bb35715feef474533a42cf6c917018 126 PRINTS PR01650 Bacterial translocase SecE signature 90 110 2.3E-12 T 13-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 BEN78_11020 a4bb35715feef474533a42cf6c917018 126 PRINTS PR01650 Bacterial translocase SecE signature 45 66 2.3E-12 T 13-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 BEN78_11020 a4bb35715feef474533a42cf6c917018 126 Gene3D G3DSA:1.20.5.1030 67 123 2.0E-18 T 13-10-2018 IPR038379 SecE superfamily BEN78_11020 a4bb35715feef474533a42cf6c917018 126 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 72 100 - T 13-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BEN78_14650 1c43d82682682568f56c9742bca7e3a6 319 SUPERFAMILY SSF52172 176 304 3.98E-24 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_14650 1c43d82682682568f56c9742bca7e3a6 319 Pfam PF01584 CheW-like domain 23 157 1.2E-31 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BEN78_14650 1c43d82682682568f56c9742bca7e3a6 319 Gene3D G3DSA:3.40.50.2300 173 311 4.6E-23 T 13-10-2018 BEN78_14650 1c43d82682682568f56c9742bca7e3a6 319 SUPERFAMILY SSF50341 18 158 2.09E-32 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 BEN78_14650 1c43d82682682568f56c9742bca7e3a6 319 Gene3D G3DSA:2.40.50.180 40 155 4.2E-24 T 13-10-2018 BEN78_14650 1c43d82682682568f56c9742bca7e3a6 319 Pfam PF00072 Response regulator receiver domain 182 297 1.6E-17 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_14650 1c43d82682682568f56c9742bca7e3a6 319 Gene3D G3DSA:2.30.30.40 25 149 4.2E-24 T 13-10-2018 BEN78_14650 1c43d82682682568f56c9742bca7e3a6 319 PIRSF PIRSF002867 1 309 2.1E-94 T 13-10-2018 IPR024181 Chemotaxis response regulator CheV BEN78_14650 1c43d82682682568f56c9742bca7e3a6 319 SMART SM00260 18 155 5.6E-20 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BEN78_14650 1c43d82682682568f56c9742bca7e3a6 319 SMART SM00448 180 305 1.0E-16 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_07255 9f75391605fa5a4afee8240ee0ff22cb 383 Pfam PF00512 His Kinase A (phospho-acceptor) domain 142 200 1.1E-8 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_07255 9f75391605fa5a4afee8240ee0ff22cb 383 Gene3D G3DSA:3.30.565.10 213 363 1.4E-33 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_07255 9f75391605fa5a4afee8240ee0ff22cb 383 SUPERFAMILY SSF55874 213 363 2.75E-33 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_07255 9f75391605fa5a4afee8240ee0ff22cb 383 SUPERFAMILY SSF52172 10 161 6.97E-43 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_07255 9f75391605fa5a4afee8240ee0ff22cb 383 Gene3D G3DSA:3.40.50.2300 4 138 3.0E-40 T 13-10-2018 BEN78_07255 9f75391605fa5a4afee8240ee0ff22cb 383 SMART SM00448 9 122 1.8E-40 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_07255 9f75391605fa5a4afee8240ee0ff22cb 383 Gene3D G3DSA:1.10.287.130 139 207 1.8E-7 T 13-10-2018 BEN78_07255 9f75391605fa5a4afee8240ee0ff22cb 383 SMART SM00387 252 364 2.0E-28 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_07255 9f75391605fa5a4afee8240ee0ff22cb 383 Pfam PF00072 Response regulator receiver domain 11 123 2.2E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_07255 9f75391605fa5a4afee8240ee0ff22cb 383 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 257 362 2.6E-19 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_07255 9f75391605fa5a4afee8240ee0ff22cb 383 SMART SM00388 141 207 4.2E-5 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_07255 9f75391605fa5a4afee8240ee0ff22cb 383 PRINTS PR00344 Bacterial sensor protein C-terminal signature 348 361 1.6E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_07255 9f75391605fa5a4afee8240ee0ff22cb 383 PRINTS PR00344 Bacterial sensor protein C-terminal signature 324 342 1.6E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_07255 9f75391605fa5a4afee8240ee0ff22cb 383 PRINTS PR00344 Bacterial sensor protein C-terminal signature 289 303 1.6E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_07255 9f75391605fa5a4afee8240ee0ff22cb 383 PRINTS PR00344 Bacterial sensor protein C-terminal signature 307 317 1.6E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_07410 a983a4fed56e10f44358a3ccef0bc0c5 772 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 306 8.2E-116 T 13-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 BEN78_07410 a983a4fed56e10f44358a3ccef0bc0c5 772 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 7 758 0.0 T 13-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 BEN78_07410 a983a4fed56e10f44358a3ccef0bc0c5 772 SUPERFAMILY SSF51726 5 393 8.5E-110 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 BEN78_07410 a983a4fed56e10f44358a3ccef0bc0c5 772 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 431 753 4.8E-155 T 13-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 BEN78_07410 a983a4fed56e10f44358a3ccef0bc0c5 772 Gene3D G3DSA:3.20.20.210 389 756 0.0 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 BEN78_07410 a983a4fed56e10f44358a3ccef0bc0c5 772 SUPERFAMILY SSF51726 396 758 1.16E-121 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 BEN78_07410 a983a4fed56e10f44358a3ccef0bc0c5 772 Gene3D G3DSA:3.20.20.210 6 524 0.0 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 BEN78_07410 a983a4fed56e10f44358a3ccef0bc0c5 772 PIRSF PIRSF000382 1 763 0.0 T 13-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 BEN78_07410 a983a4fed56e10f44358a3ccef0bc0c5 772 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 2 758 37.115 T 13-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 BEN78_08380 baeaa3faf46782d5463c7603ffae1a96 1056 PRINTS PR00702 Acriflavin resistance protein family signature 41 59 7.5E-24 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_08380 baeaa3faf46782d5463c7603ffae1a96 1056 PRINTS PR00702 Acriflavin resistance protein family signature 440 463 7.5E-24 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_08380 baeaa3faf46782d5463c7603ffae1a96 1056 PRINTS PR00702 Acriflavin resistance protein family signature 465 488 7.5E-24 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_08380 baeaa3faf46782d5463c7603ffae1a96 1056 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 7.5E-24 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_08380 baeaa3faf46782d5463c7603ffae1a96 1056 PRINTS PR00702 Acriflavin resistance protein family signature 387 411 7.5E-24 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_08380 baeaa3faf46782d5463c7603ffae1a96 1056 SUPERFAMILY SSF82693 140 326 2.2E-16 T 13-10-2018 BEN78_08380 baeaa3faf46782d5463c7603ffae1a96 1056 Gene3D G3DSA:3.30.70.1430 43 836 7.2E-251 T 13-10-2018 BEN78_08380 baeaa3faf46782d5463c7603ffae1a96 1056 Gene3D G3DSA:3.30.2090.10 182 271 7.2E-251 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN78_08380 baeaa3faf46782d5463c7603ffae1a96 1056 Gene3D G3DSA:1.20.1640.10 14 512 7.2E-251 T 13-10-2018 BEN78_08380 baeaa3faf46782d5463c7603ffae1a96 1056 Gene3D G3DSA:3.30.70.1430 591 689 7.2E-251 T 13-10-2018 BEN78_08380 baeaa3faf46782d5463c7603ffae1a96 1056 Gene3D G3DSA:3.30.70.1440 690 888 7.2E-251 T 13-10-2018 BEN78_08380 baeaa3faf46782d5463c7603ffae1a96 1056 SUPERFAMILY SSF82714 743 827 1.57E-12 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN78_08380 baeaa3faf46782d5463c7603ffae1a96 1056 Pfam PF00873 AcrB/AcrD/AcrF family 8 1041 4.7E-161 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_08380 baeaa3faf46782d5463c7603ffae1a96 1056 SUPERFAMILY SSF82693 43 139 1.22E-18 T 13-10-2018 BEN78_08380 baeaa3faf46782d5463c7603ffae1a96 1056 Gene3D G3DSA:1.20.1640.10 537 1040 7.2E-251 T 13-10-2018 BEN78_08380 baeaa3faf46782d5463c7603ffae1a96 1056 Gene3D G3DSA:3.30.70.1320 139 329 7.2E-251 T 13-10-2018 BEN78_08380 baeaa3faf46782d5463c7603ffae1a96 1056 SUPERFAMILY SSF82714 188 268 2.75E-14 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN78_08380 baeaa3faf46782d5463c7603ffae1a96 1056 SUPERFAMILY SSF82866 300 487 4.97E-36 T 13-10-2018 BEN78_08380 baeaa3faf46782d5463c7603ffae1a96 1056 Gene3D G3DSA:3.30.2090.10 741 828 7.2E-251 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN78_08380 baeaa3faf46782d5463c7603ffae1a96 1056 SUPERFAMILY SSF82866 826 1048 2.62E-47 T 13-10-2018 BEN78_01930 dd480b127c64488831069ca2ff944480 384 Gene3D G3DSA:3.40.50.20 1 102 7.8E-31 T 13-10-2018 BEN78_01930 dd480b127c64488831069ca2ff944480 384 SUPERFAMILY SSF52440 2 95 1.87E-21 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BEN78_01930 dd480b127c64488831069ca2ff944480 384 Pfam PF02222 ATP-grasp domain 107 279 4.9E-56 T 13-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type BEN78_01930 dd480b127c64488831069ca2ff944480 384 SUPERFAMILY SSF51246 304 369 3.92E-16 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 BEN78_01930 dd480b127c64488831069ca2ff944480 384 Gene3D G3DSA:3.30.470.20 181 371 5.0E-70 T 13-10-2018 BEN78_01930 dd480b127c64488831069ca2ff944480 384 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 3 357 3.1E-113 T 13-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 BEN78_01930 dd480b127c64488831069ca2ff944480 384 SUPERFAMILY SSF56059 98 299 2.12E-61 T 13-10-2018 BEN78_01930 dd480b127c64488831069ca2ff944480 384 Gene3D G3DSA:3.30.1490.20 103 180 9.7E-29 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BEN78_01930 dd480b127c64488831069ca2ff944480 384 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 3 351 40.844 T 13-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 BEN78_09905 37b5c8e97e8fe3d634e5d0a6690a89f5 270 Pfam PF04355 SmpA / OmlA family 46 115 5.6E-17 T 13-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 BEN78_09905 37b5c8e97e8fe3d634e5d0a6690a89f5 270 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 218 237 6.9E-5 T 13-10-2018 BEN78_09905 37b5c8e97e8fe3d634e5d0a6690a89f5 270 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 200 217 6.9E-5 T 13-10-2018 BEN78_09905 37b5c8e97e8fe3d634e5d0a6690a89f5 270 Gene3D G3DSA:3.30.1450.10 45 133 6.2E-8 T 13-10-2018 IPR037873 BamE-like BEN78_09905 37b5c8e97e8fe3d634e5d0a6690a89f5 270 Pfam PF00691 OmpA family 153 241 1.1E-14 T 13-10-2018 IPR006665 OmpA-like domain BEN78_09905 37b5c8e97e8fe3d634e5d0a6690a89f5 270 SUPERFAMILY SSF103088 145 261 9.68E-27 T 13-10-2018 IPR036737 OmpA-like domain superfamily BEN78_09905 37b5c8e97e8fe3d634e5d0a6690a89f5 270 Gene3D G3DSA:3.30.1330.60 137 269 7.0E-31 T 13-10-2018 IPR036737 OmpA-like domain superfamily BEN78_09905 37b5c8e97e8fe3d634e5d0a6690a89f5 270 PRINTS PR01021 OMPA domain signature 200 216 7.4E-12 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BEN78_09905 37b5c8e97e8fe3d634e5d0a6690a89f5 270 PRINTS PR01021 OMPA domain signature 185 200 7.4E-12 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BEN78_09905 37b5c8e97e8fe3d634e5d0a6690a89f5 270 PRINTS PR01021 OMPA domain signature 154 176 7.4E-12 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BEN78_10585 58044b632a56bbe8f7817560e0bd4139 534 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 56 71 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site BEN78_10585 58044b632a56bbe8f7817560e0bd4139 534 Pfam PF00009 Elongation factor Tu GTP binding domain 11 275 6.3E-48 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN78_10585 58044b632a56bbe8f7817560e0bd4139 534 SUPERFAMILY SSF50447 259 391 1.84E-29 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BEN78_10585 58044b632a56bbe8f7817560e0bd4139 534 SUPERFAMILY SSF54980 391 466 3.56E-17 T 13-10-2018 IPR035647 EF-G domain III/V-like BEN78_10585 58044b632a56bbe8f7817560e0bd4139 534 SUPERFAMILY SSF52540 8 275 2.72E-85 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_10585 58044b632a56bbe8f7817560e0bd4139 534 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 156 3.7E-21 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BEN78_10585 58044b632a56bbe8f7817560e0bd4139 534 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 4 527 4.8E-251 T 13-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 BEN78_10585 58044b632a56bbe8f7817560e0bd4139 534 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 2 525 52.179 T 13-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 BEN78_10585 58044b632a56bbe8f7817560e0bd4139 534 Gene3D G3DSA:3.40.50.300 108 273 1.1E-108 T 13-10-2018 BEN78_10585 58044b632a56bbe8f7817560e0bd4139 534 Gene3D G3DSA:3.30.70.3280 388 527 4.6E-50 T 13-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily BEN78_10585 58044b632a56bbe8f7817560e0bd4139 534 PRINTS PR00315 GTP-binding elongation factor signature 63 71 2.6E-11 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN78_10585 58044b632a56bbe8f7817560e0bd4139 534 PRINTS PR00315 GTP-binding elongation factor signature 83 93 2.6E-11 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN78_10585 58044b632a56bbe8f7817560e0bd4139 534 PRINTS PR00315 GTP-binding elongation factor signature 13 26 2.6E-11 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN78_10585 58044b632a56bbe8f7817560e0bd4139 534 PRINTS PR00315 GTP-binding elongation factor signature 135 144 2.6E-11 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN78_10585 58044b632a56bbe8f7817560e0bd4139 534 PRINTS PR00315 GTP-binding elongation factor signature 99 110 2.6E-11 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN78_10585 58044b632a56bbe8f7817560e0bd4139 534 Gene3D G3DSA:3.40.50.300 70 377 1.1E-108 T 13-10-2018 BEN78_10585 58044b632a56bbe8f7817560e0bd4139 534 Pfam PF16658 Class II release factor RF3, C-terminal domain 385 512 1.4E-46 T 13-10-2018 IPR032090 Peptide chain release factor 3, C-terminal BEN78_11910 ebe38f72049771e829b4c94bd545434d 469 SMART SM00387 348 457 1.5E-28 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_11910 ebe38f72049771e829b4c94bd545434d 469 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 352 455 1.7E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_11910 ebe38f72049771e829b4c94bd545434d 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 400 4.2E-19 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_11910 ebe38f72049771e829b4c94bd545434d 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 414 4.2E-19 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_11910 ebe38f72049771e829b4c94bd545434d 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 435 4.2E-19 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_11910 ebe38f72049771e829b4c94bd545434d 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 454 4.2E-19 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_11910 ebe38f72049771e829b4c94bd545434d 469 Gene3D G3DSA:1.10.287.130 212 302 1.8E-12 T 13-10-2018 BEN78_11910 ebe38f72049771e829b4c94bd545434d 469 SUPERFAMILY SSF55874 297 457 1.31E-37 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_11910 ebe38f72049771e829b4c94bd545434d 469 Gene3D G3DSA:3.30.565.10 309 465 2.3E-39 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_08955 bd55b5ea3dacd994827f615921e48fee 318 Pfam PF00892 EamA-like transporter family 28 157 5.8E-16 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BEN78_08955 bd55b5ea3dacd994827f615921e48fee 318 Pfam PF00892 EamA-like transporter family 168 301 3.1E-16 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BEN78_08955 bd55b5ea3dacd994827f615921e48fee 318 SUPERFAMILY SSF103481 61 160 2.75E-13 T 13-10-2018 BEN78_08955 bd55b5ea3dacd994827f615921e48fee 318 SUPERFAMILY SSF103481 214 305 2.35E-13 T 13-10-2018 BEN78_02955 e3a9f1b181781c1cf56daf20889c64eb 257 Gene3D G3DSA:3.60.140.10 1 257 2.9E-80 T 13-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily BEN78_02955 e3a9f1b181781c1cf56daf20889c64eb 257 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 21 254 3.2E-70 T 13-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase BEN78_02955 e3a9f1b181781c1cf56daf20889c64eb 257 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 28 255 8.8E-51 T 13-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase BEN78_02955 e3a9f1b181781c1cf56daf20889c64eb 257 SUPERFAMILY SSF64438 3 255 8.61E-75 T 13-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic BEN78_01430 5ff7b7923ebe81010e3e5c10532c8380 495 SUPERFAMILY SSF103473 15 474 3.49E-27 T 13-10-2018 IPR036259 MFS transporter superfamily BEN78_01430 5ff7b7923ebe81010e3e5c10532c8380 495 Pfam PF13347 MFS/sugar transport protein 15 266 7.3E-52 T 13-10-2018 BEN78_01430 5ff7b7923ebe81010e3e5c10532c8380 495 Pfam PF13347 MFS/sugar transport protein 305 473 1.9E-31 T 13-10-2018 BEN78_01430 5ff7b7923ebe81010e3e5c10532c8380 495 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 13 271 1.0E-72 T 13-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 BEN78_01430 5ff7b7923ebe81010e3e5c10532c8380 495 Gene3D G3DSA:1.20.1250.20 4 211 3.3E-10 T 13-10-2018 BEN78_02665 08b600acc277b4222af9e4aadf75cfee 3258 Gene3D G3DSA:2.60.40.10 2177 2280 1.4E-9 T 13-10-2018 IPR013783 Immunoglobulin-like fold BEN78_02665 08b600acc277b4222af9e4aadf75cfee 3258 Gene3D G3DSA:2.60.40.10 2304 2406 1.7E-10 T 13-10-2018 IPR013783 Immunoglobulin-like fold BEN78_02665 08b600acc277b4222af9e4aadf75cfee 3258 Gene3D G3DSA:2.60.40.10 1549 1650 4.4E-11 T 13-10-2018 IPR013783 Immunoglobulin-like fold BEN78_02665 08b600acc277b4222af9e4aadf75cfee 3258 Gene3D G3DSA:2.60.40.10 1296 1398 3.6E-11 T 13-10-2018 IPR013783 Immunoglobulin-like fold BEN78_02665 08b600acc277b4222af9e4aadf75cfee 3258 Gene3D G3DSA:2.60.40.10 1800 1902 1.3E-9 T 13-10-2018 IPR013783 Immunoglobulin-like fold BEN78_02665 08b600acc277b4222af9e4aadf75cfee 3258 Gene3D G3DSA:2.60.40.10 794 894 3.7E-10 T 13-10-2018 IPR013783 Immunoglobulin-like fold BEN78_02665 08b600acc277b4222af9e4aadf75cfee 3258 Gene3D G3DSA:2.60.40.10 919 1020 4.4E-11 T 13-10-2018 IPR013783 Immunoglobulin-like fold BEN78_02665 08b600acc277b4222af9e4aadf75cfee 3258 Gene3D G3DSA:2.60.40.10 2441 2532 5.7E-9 T 13-10-2018 IPR013783 Immunoglobulin-like fold BEN78_02665 08b600acc277b4222af9e4aadf75cfee 3258 Gene3D G3DSA:2.60.40.10 1173 1272 1.0E-10 T 13-10-2018 IPR013783 Immunoglobulin-like fold BEN78_02665 08b600acc277b4222af9e4aadf75cfee 3258 Gene3D G3DSA:2.60.40.10 413 516 3.4E-11 T 13-10-2018 IPR013783 Immunoglobulin-like fold BEN78_02665 08b600acc277b4222af9e4aadf75cfee 3258 Gene3D G3DSA:2.60.40.10 1673 1776 1.4E-10 T 13-10-2018 IPR013783 Immunoglobulin-like fold BEN78_02665 08b600acc277b4222af9e4aadf75cfee 3258 Gene3D G3DSA:2.60.40.10 540 642 1.3E-11 T 13-10-2018 IPR013783 Immunoglobulin-like fold BEN78_02665 08b600acc277b4222af9e4aadf75cfee 3258 Gene3D G3DSA:2.60.40.10 1926 2028 3.2E-10 T 13-10-2018 IPR013783 Immunoglobulin-like fold BEN78_02665 08b600acc277b4222af9e4aadf75cfee 3258 Gene3D G3DSA:2.60.40.10 164 264 6.0E-10 T 13-10-2018 IPR013783 Immunoglobulin-like fold BEN78_02665 08b600acc277b4222af9e4aadf75cfee 3258 Gene3D G3DSA:2.60.40.10 288 390 3.4E-11 T 13-10-2018 IPR013783 Immunoglobulin-like fold BEN78_02665 08b600acc277b4222af9e4aadf75cfee 3258 Gene3D G3DSA:2.60.40.10 40 137 6.4E-6 T 13-10-2018 IPR013783 Immunoglobulin-like fold BEN78_02665 08b600acc277b4222af9e4aadf75cfee 3258 Gene3D G3DSA:2.60.40.10 666 768 2.3E-11 T 13-10-2018 IPR013783 Immunoglobulin-like fold BEN78_02665 08b600acc277b4222af9e4aadf75cfee 3258 Gene3D G3DSA:2.60.40.10 1422 1524 3.4E-10 T 13-10-2018 IPR013783 Immunoglobulin-like fold BEN78_02665 08b600acc277b4222af9e4aadf75cfee 3258 Gene3D G3DSA:2.60.40.10 1044 1146 3.9E-11 T 13-10-2018 IPR013783 Immunoglobulin-like fold BEN78_02665 08b600acc277b4222af9e4aadf75cfee 3258 Gene3D G3DSA:2.60.40.10 2052 2154 5.0E-10 T 13-10-2018 IPR013783 Immunoglobulin-like fold BEN78_02665 08b600acc277b4222af9e4aadf75cfee 3258 TIGRFAM TIGR04226 RrgB_K2N_iso_D2: fimbrial isopeptide formation D2 domain 543 634 1.5E-7 T 13-10-2018 IPR026466 Fimbrial isopeptide formation D2 domain BEN78_02665 08b600acc277b4222af9e4aadf75cfee 3258 TIGRFAM TIGR04226 RrgB_K2N_iso_D2: fimbrial isopeptide formation D2 domain 1047 1134 1.6E-7 T 13-10-2018 IPR026466 Fimbrial isopeptide formation D2 domain BEN78_02665 08b600acc277b4222af9e4aadf75cfee 3258 TIGRFAM TIGR04226 RrgB_K2N_iso_D2: fimbrial isopeptide formation D2 domain 2055 2141 1.8E-7 T 13-10-2018 IPR026466 Fimbrial isopeptide formation D2 domain BEN78_02665 08b600acc277b4222af9e4aadf75cfee 3258 TIGRFAM TIGR04226 RrgB_K2N_iso_D2: fimbrial isopeptide formation D2 domain 2181 2267 9.8E-8 T 13-10-2018 IPR026466 Fimbrial isopeptide formation D2 domain BEN78_02665 08b600acc277b4222af9e4aadf75cfee 3258 TIGRFAM TIGR04226 RrgB_K2N_iso_D2: fimbrial isopeptide formation D2 domain 669 760 1.3E-7 T 13-10-2018 IPR026466 Fimbrial isopeptide formation D2 domain BEN78_02665 08b600acc277b4222af9e4aadf75cfee 3258 Pfam PF00691 OmpA family 3168 3255 8.6E-8 T 13-10-2018 IPR006665 OmpA-like domain BEN78_02665 08b600acc277b4222af9e4aadf75cfee 3258 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 178 215 6.5E-5 T 13-10-2018 IPR001434 Domain of unknown function DUF11 BEN78_02665 08b600acc277b4222af9e4aadf75cfee 3258 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 46 88 5.9E-4 T 13-10-2018 IPR001434 Domain of unknown function DUF11 BEN78_02665 08b600acc277b4222af9e4aadf75cfee 3258 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 2689 2737 1.6E-10 T 13-10-2018 IPR001434 Domain of unknown function DUF11 BEN78_02665 08b600acc277b4222af9e4aadf75cfee 3258 SUPERFAMILY SSF103088 3162 3256 3.53E-17 T 13-10-2018 IPR036737 OmpA-like domain superfamily BEN78_02665 08b600acc277b4222af9e4aadf75cfee 3258 Pfam PF01345 Domain of unknown function DUF11 1303 1393 2.5E-6 T 13-10-2018 IPR001434 Domain of unknown function DUF11 BEN78_02665 08b600acc277b4222af9e4aadf75cfee 3258 Pfam PF01345 Domain of unknown function DUF11 1049 1139 2.0E-6 T 13-10-2018 IPR001434 Domain of unknown function DUF11 BEN78_02665 08b600acc277b4222af9e4aadf75cfee 3258 Pfam PF01345 Domain of unknown function DUF11 545 635 2.0E-6 T 13-10-2018 IPR001434 Domain of unknown function DUF11 BEN78_02665 08b600acc277b4222af9e4aadf75cfee 3258 Pfam PF01345 Domain of unknown function DUF11 167 257 1.5E-7 T 13-10-2018 IPR001434 Domain of unknown function DUF11 BEN78_02665 08b600acc277b4222af9e4aadf75cfee 3258 Pfam PF01345 Domain of unknown function DUF11 2687 2781 2.4E-9 T 13-10-2018 IPR001434 Domain of unknown function DUF11 BEN78_02665 08b600acc277b4222af9e4aadf75cfee 3258 Gene3D G3DSA:3.30.1330.60 3158 3258 1.1E-16 T 13-10-2018 IPR036737 OmpA-like domain superfamily BEN78_02665 08b600acc277b4222af9e4aadf75cfee 3258 PRINTS PR01021 OMPA domain signature 3169 3191 1.1E-10 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BEN78_02665 08b600acc277b4222af9e4aadf75cfee 3258 PRINTS PR01021 OMPA domain signature 3214 3230 1.1E-10 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BEN78_02665 08b600acc277b4222af9e4aadf75cfee 3258 PRINTS PR01021 OMPA domain signature 3199 3214 1.1E-10 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BEN78_01565 74d9e0ee5dcd1c162c36e5cbe814ca4c 559 Gene3D G3DSA:2.60.120.200 376 559 1.1E-38 T 13-10-2018 BEN78_01565 74d9e0ee5dcd1c162c36e5cbe814ca4c 559 SUPERFAMILY SSF75005 51 360 2.86E-90 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BEN78_01565 74d9e0ee5dcd1c162c36e5cbe814ca4c 559 Pfam PF04616 Glycosyl hydrolases family 43 51 343 3.1E-94 T 13-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 BEN78_01565 74d9e0ee5dcd1c162c36e5cbe814ca4c 559 Gene3D G3DSA:2.115.10.20 50 352 1.8E-92 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BEN78_01565 74d9e0ee5dcd1c162c36e5cbe814ca4c 559 SUPERFAMILY SSF49899 375 557 3.56E-38 T 13-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily BEN78_09530 9cc083c01bfa10aec73db5fdf4fd65c9 325 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 12 317 37.094 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 BEN78_09530 9cc083c01bfa10aec73db5fdf4fd65c9 325 SUPERFAMILY SSF53335 12 317 5.79E-42 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_09530 9cc083c01bfa10aec73db5fdf4fd65c9 325 SUPERFAMILY SSF81799 119 223 1.7E-32 T 13-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 BEN78_09530 9cc083c01bfa10aec73db5fdf4fd65c9 325 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 11 316 2.0E-97 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 BEN78_09530 9cc083c01bfa10aec73db5fdf4fd65c9 325 PIRSF PIRSF004486 6 318 5.4E-95 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 BEN78_09530 9cc083c01bfa10aec73db5fdf4fd65c9 325 Gene3D G3DSA:1.10.150.170 117 224 5.5E-96 T 13-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 BEN78_09530 9cc083c01bfa10aec73db5fdf4fd65c9 325 Gene3D G3DSA:3.40.50.150 15 316 5.5E-96 T 13-10-2018 BEN78_09530 9cc083c01bfa10aec73db5fdf4fd65c9 325 Pfam PF01795 MraW methylase family 11 316 1.7E-97 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 BEN78_13080 b467aeeedd80f15f1aa4bafba837c8e6 475 Gene3D G3DSA:3.90.1720.10 309 471 2.0E-34 T 13-10-2018 BEN78_13080 b467aeeedd80f15f1aa4bafba837c8e6 475 PIRSF PIRSF019015 24 474 3.3E-78 T 13-10-2018 IPR027017 Uncharacterised peptidase with NlpC/P60 domain, YkfC type BEN78_13080 b467aeeedd80f15f1aa4bafba837c8e6 475 Pfam PF00877 NlpC/P60 family 336 428 4.5E-12 T 13-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain BEN78_13080 b467aeeedd80f15f1aa4bafba837c8e6 475 SUPERFAMILY SSF54001 321 427 3.92E-17 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BEN78_13080 b467aeeedd80f15f1aa4bafba837c8e6 475 Pfam PF12913 SH3 domain (SH3b1 type) 169 217 2.0E-17 T 13-10-2018 IPR039439 SH3b1 domain BEN78_12190 dd588bb110030f4232d897b90f058ae6 747 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 36 472 1.9E-132 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BEN78_12190 dd588bb110030f4232d897b90f058ae6 747 SUPERFAMILY SSF56719 35 487 5.75E-152 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 BEN78_12190 dd588bb110030f4232d897b90f058ae6 747 SUPERFAMILY SSF101904 501 743 1.14E-45 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal BEN78_12190 dd588bb110030f4232d897b90f058ae6 747 Gene3D G3DSA:1.10.268.10 373 458 7.7E-173 T 13-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 BEN78_12190 dd588bb110030f4232d897b90f058ae6 747 Gene3D G3DSA:2.120.10.90 504 731 1.2E-13 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal BEN78_12190 dd588bb110030f4232d897b90f058ae6 747 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 13 742 0.0 T 13-10-2018 BEN78_12190 dd588bb110030f4232d897b90f058ae6 747 Gene3D G3DSA:3.30.1360.40 242 335 7.7E-173 T 13-10-2018 BEN78_12190 dd588bb110030f4232d897b90f058ae6 747 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 8 745 33.851 T 13-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BEN78_12190 dd588bb110030f4232d897b90f058ae6 747 SMART SM00434 15 465 1.2E-223 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BEN78_12190 dd588bb110030f4232d897b90f058ae6 747 Gene3D G3DSA:3.90.199.10 36 485 7.7E-173 T 13-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 BEN78_12190 dd588bb110030f4232d897b90f058ae6 747 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 649 699 3.0E-5 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BEN78_12190 dd588bb110030f4232d897b90f058ae6 747 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 602 637 0.45 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BEN78_06650 3abc5dbe08516336fb3c0a65a7b49e1d 635 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 184 2.8E-12 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_06650 3abc5dbe08516336fb3c0a65a7b49e1d 635 Gene3D G3DSA:3.30.565.10 1 228 1.3E-75 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_06650 3abc5dbe08516336fb3c0a65a7b49e1d 635 PRINTS PR00775 90kDa heat shock protein signature 27 49 7.2E-62 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal BEN78_06650 3abc5dbe08516336fb3c0a65a7b49e1d 635 PRINTS PR00775 90kDa heat shock protein signature 76 93 7.2E-62 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal BEN78_06650 3abc5dbe08516336fb3c0a65a7b49e1d 635 PRINTS PR00775 90kDa heat shock protein signature 173 190 7.2E-62 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal BEN78_06650 3abc5dbe08516336fb3c0a65a7b49e1d 635 PRINTS PR00775 90kDa heat shock protein signature 94 111 7.2E-62 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal BEN78_06650 3abc5dbe08516336fb3c0a65a7b49e1d 635 PRINTS PR00775 90kDa heat shock protein signature 121 143 7.2E-62 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal BEN78_06650 3abc5dbe08516336fb3c0a65a7b49e1d 635 PRINTS PR00775 90kDa heat shock protein signature 6 26 7.2E-62 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal BEN78_06650 3abc5dbe08516336fb3c0a65a7b49e1d 635 PRINTS PR00775 90kDa heat shock protein signature 191 209 7.2E-62 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal BEN78_06650 3abc5dbe08516336fb3c0a65a7b49e1d 635 SMART SM00387 28 185 1.2E-10 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_06650 3abc5dbe08516336fb3c0a65a7b49e1d 635 Gene3D G3DSA:1.20.120.790 504 634 1.2E-39 T 13-10-2018 IPR037196 HSP90, C-terminal domain BEN78_06650 3abc5dbe08516336fb3c0a65a7b49e1d 635 Gene3D G3DSA:3.40.50.11260 411 500 6.4E-30 T 13-10-2018 BEN78_06650 3abc5dbe08516336fb3c0a65a7b49e1d 635 Pfam PF00183 Hsp90 protein 225 633 6.4E-123 T 13-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 BEN78_06650 3abc5dbe08516336fb3c0a65a7b49e1d 635 SUPERFAMILY SSF110942 521 634 6.28E-32 T 13-10-2018 IPR037196 HSP90, C-terminal domain BEN78_06650 3abc5dbe08516336fb3c0a65a7b49e1d 635 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 26 35 - T 13-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 BEN78_06650 3abc5dbe08516336fb3c0a65a7b49e1d 635 Gene3D G3DSA:3.30.230.80 241 410 2.4E-64 T 13-10-2018 BEN78_06650 3abc5dbe08516336fb3c0a65a7b49e1d 635 SUPERFAMILY SSF54211 242 499 2.35E-89 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BEN78_06650 3abc5dbe08516336fb3c0a65a7b49e1d 635 SUPERFAMILY SSF55874 5 213 4.19E-65 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_06650 3abc5dbe08516336fb3c0a65a7b49e1d 635 Hamap MF_00505 Chaperone protein HtpG [htpG]. 3 634 30.631 T 13-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 BEN78_06650 3abc5dbe08516336fb3c0a65a7b49e1d 635 PIRSF PIRSF002583 1 635 9.4E-208 T 13-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 BEN78_00505 0e32b7295ebbd671cd8647a54f29d0c0 871 Gene3D G3DSA:1.10.3210.10 439 585 8.3E-9 T 13-10-2018 BEN78_00505 0e32b7295ebbd671cd8647a54f29d0c0 871 SMART SM00471 446 593 3.2E-10 T 13-10-2018 IPR003607 HD/PDEase domain BEN78_00505 0e32b7295ebbd671cd8647a54f29d0c0 871 Pfam PF01966 HD domain 451 569 3.2E-12 T 13-10-2018 IPR006674 HD domain BEN78_00505 0e32b7295ebbd671cd8647a54f29d0c0 871 SUPERFAMILY SSF109604 414 541 2.61E-15 T 13-10-2018 BEN78_00505 0e32b7295ebbd671cd8647a54f29d0c0 871 Pfam PF08335 GlnD PII-uridylyltransferase 178 316 8.2E-29 T 13-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 BEN78_00505 0e32b7295ebbd671cd8647a54f29d0c0 871 PIRSF PIRSF006288 7 870 4.9E-270 T 13-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 BEN78_00505 0e32b7295ebbd671cd8647a54f29d0c0 871 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 36 865 7.1E-222 T 13-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 BEN78_00505 0e32b7295ebbd671cd8647a54f29d0c0 871 Pfam PF01842 ACT domain 797 854 6.2E-7 T 13-10-2018 IPR002912 ACT domain BEN78_00505 0e32b7295ebbd671cd8647a54f29d0c0 871 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 871 245.182 T 13-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 BEN78_00505 0e32b7295ebbd671cd8647a54f29d0c0 871 Gene3D G3DSA:3.30.70.260 793 866 7.5E-9 T 13-10-2018 BEN78_00505 0e32b7295ebbd671cd8647a54f29d0c0 871 Pfam PF01909 Nucleotidyltransferase domain 72 115 3.5E-5 T 13-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 BEN78_00505 0e32b7295ebbd671cd8647a54f29d0c0 871 SUPERFAMILY SSF81593 196 317 2.67E-9 T 13-10-2018 BEN78_00505 0e32b7295ebbd671cd8647a54f29d0c0 871 SUPERFAMILY SSF81301 44 174 6.87E-20 T 13-10-2018 BEN78_00505 0e32b7295ebbd671cd8647a54f29d0c0 871 SUPERFAMILY SSF55021 794 857 1.37E-12 T 13-10-2018 BEN78_05775 2a00c2fa83f4c6db8e01146115c21e80 171 Gene3D G3DSA:1.10.760.10 87 171 1.3E-26 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BEN78_05775 2a00c2fa83f4c6db8e01146115c21e80 171 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 91 166 8.4E-12 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_05775 2a00c2fa83f4c6db8e01146115c21e80 171 SUPERFAMILY SSF46626 66 168 1.89E-17 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BEN78_11110 14a38a5aa926055d02955722b2899d54 130 SUPERFAMILY SSF54843 22 129 1.44E-41 T 13-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 BEN78_11110 14a38a5aa926055d02955722b2899d54 130 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 20 129 27.692 T 13-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_11110 14a38a5aa926055d02955722b2899d54 130 Pfam PF00237 Ribosomal protein L22p/L17e 25 126 6.7E-36 T 13-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 BEN78_11110 14a38a5aa926055d02955722b2899d54 130 Gene3D G3DSA:3.90.470.10 16 130 5.6E-44 T 13-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 BEN78_11110 14a38a5aa926055d02955722b2899d54 130 ProSitePatterns PS00464 Ribosomal protein L22 signature. 102 126 - T 13-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11110 14a38a5aa926055d02955722b2899d54 130 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 24 126 3.6E-45 T 13-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_14005 2ca815262182427a3236b0a5f7aa9d83 422 Gene3D G3DSA:3.50.50.60 6 367 6.7E-56 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_14005 2ca815262182427a3236b0a5f7aa9d83 422 Pfam PF01494 FAD binding domain 150 337 1.2E-16 T 13-10-2018 IPR002938 FAD-binding domain GO:0071949 BEN78_14005 2ca815262182427a3236b0a5f7aa9d83 422 SUPERFAMILY SSF51905 5 377 5.31E-49 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_14005 2ca815262182427a3236b0a5f7aa9d83 422 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 298 314 4.4E-15 T 13-10-2018 BEN78_14005 2ca815262182427a3236b0a5f7aa9d83 422 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 148 163 4.4E-15 T 13-10-2018 BEN78_14005 2ca815262182427a3236b0a5f7aa9d83 422 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 4.4E-15 T 13-10-2018 BEN78_14005 2ca815262182427a3236b0a5f7aa9d83 422 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 283 298 4.4E-15 T 13-10-2018 BEN78_12770 37b957304b09906cba3dc595c2721438 743 Gene3D G3DSA:2.40.40.20 651 741 2.7E-10 T 13-10-2018 BEN78_12770 37b957304b09906cba3dc595c2721438 743 Gene3D G3DSA:3.40.228.10 354 424 6.2E-16 T 13-10-2018 BEN78_12770 37b957304b09906cba3dc595c2721438 743 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 44 61 - T 13-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12770 37b957304b09906cba3dc595c2721438 743 Gene3D G3DSA:3.10.20.740 14 136 6.7E-41 T 13-10-2018 BEN78_12770 37b957304b09906cba3dc595c2721438 743 SUPERFAMILY SSF54292 15 87 4.67E-19 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 BEN78_12770 37b957304b09906cba3dc595c2721438 743 SUPERFAMILY SSF53706 226 627 1.18E-79 T 13-10-2018 BEN78_12770 37b957304b09906cba3dc595c2721438 743 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 158 168 - T 13-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12770 37b957304b09906cba3dc595c2721438 743 Gene3D G3DSA:3.40.50.740 293 353 6.2E-16 T 13-10-2018 BEN78_12770 37b957304b09906cba3dc595c2721438 743 Pfam PF01568 Molydopterin dinucleotide binding domain 677 729 2.3E-10 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 BEN78_12770 37b957304b09906cba3dc595c2721438 743 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 96 132 2.6E-16 T 13-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12770 37b957304b09906cba3dc595c2721438 743 SUPERFAMILY SSF54862 89 224 8.79E-37 T 13-10-2018 BEN78_12770 37b957304b09906cba3dc595c2721438 743 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 17 606 4.2E-205 T 13-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12770 37b957304b09906cba3dc595c2721438 743 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 14 89 4.1E-19 T 13-10-2018 BEN78_12770 37b957304b09906cba3dc595c2721438 743 Gene3D G3DSA:3.30.70.20 138 217 3.0E-8 T 13-10-2018 BEN78_12770 37b957304b09906cba3dc595c2721438 743 SUPERFAMILY SSF50692 659 729 2.26E-12 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily BEN78_12770 37b957304b09906cba3dc595c2721438 743 SMART SM00929 96 136 7.9E-20 T 13-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12770 37b957304b09906cba3dc595c2721438 743 Gene3D G3DSA:3.40.50.740 443 638 2.4E-12 T 13-10-2018 BEN78_12770 37b957304b09906cba3dc595c2721438 743 Pfam PF00384 Molybdopterin oxidoreductase 439 607 2.5E-14 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12770 37b957304b09906cba3dc595c2721438 743 Pfam PF00384 Molybdopterin oxidoreductase 288 423 3.2E-17 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12770 37b957304b09906cba3dc595c2721438 743 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 111 123 - T 13-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_15625 d7f93563b5c4f7aebb71bead530fd3d0 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 381 3.7E-28 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 BEN78_15625 d7f93563b5c4f7aebb71bead530fd3d0 387 SUPERFAMILY SSF47203 234 383 7.73E-37 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 BEN78_15625 d7f93563b5c4f7aebb71bead530fd3d0 387 Gene3D G3DSA:2.40.110.10 131 234 2.8E-39 T 13-10-2018 BEN78_15625 d7f93563b5c4f7aebb71bead530fd3d0 387 SUPERFAMILY SSF56645 5 233 5.1E-81 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 BEN78_15625 d7f93563b5c4f7aebb71bead530fd3d0 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 17 127 6.1E-33 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 BEN78_15625 d7f93563b5c4f7aebb71bead530fd3d0 387 Gene3D G3DSA:1.20.140.10 236 387 2.4E-33 T 13-10-2018 BEN78_15625 d7f93563b5c4f7aebb71bead530fd3d0 387 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 340 359 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 BEN78_15625 d7f93563b5c4f7aebb71bead530fd3d0 387 Gene3D G3DSA:1.10.540.10 1 129 1.7E-39 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 BEN78_15625 d7f93563b5c4f7aebb71bead530fd3d0 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 132 222 1.9E-25 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 BEN78_00245 0d1dbeee369910f022374ad956261a00 287 Gene3D G3DSA:3.30.479.30 48 187 1.5E-15 T 13-10-2018 BEN78_00245 0d1dbeee369910f022374ad956261a00 287 Pfam PF01145 SPFH domain / Band 7 family 23 201 1.8E-24 T 13-10-2018 IPR001107 Band 7 domain BEN78_00245 0d1dbeee369910f022374ad956261a00 287 SUPERFAMILY SSF117892 51 189 1.31E-18 T 13-10-2018 IPR036013 Band 7/SPFH domain superfamily BEN78_00245 0d1dbeee369910f022374ad956261a00 287 SMART SM00244 19 184 4.3E-21 T 13-10-2018 IPR001107 Band 7 domain BEN78_00245 0d1dbeee369910f022374ad956261a00 287 PIRSF PIRSF005651 1 287 8.9E-80 T 13-10-2018 IPR010200 HflC GO:0016021|GO:0052547 BEN78_00245 0d1dbeee369910f022374ad956261a00 287 TIGRFAM TIGR01932 hflC: HflC protein 150 283 8.5E-41 T 13-10-2018 IPR010200 HflC GO:0016021|GO:0052547 BEN78_12605 578e09ee5cdf417e52300d343e9daea7 450 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 7 443 2.0E-169 T 13-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 BEN78_12605 578e09ee5cdf417e52300d343e9daea7 450 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 6 445 60.372 T 13-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 BEN78_12605 578e09ee5cdf417e52300d343e9daea7 450 SMART SM00729 137 368 1.4E-49 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BEN78_12605 578e09ee5cdf417e52300d343e9daea7 450 Gene3D G3DSA:2.40.50.140 383 450 5.5E-16 T 13-10-2018 BEN78_12605 578e09ee5cdf417e52300d343e9daea7 450 Pfam PF00919 Uncharacterized protein family UPF0004 7 88 2.0E-20 T 13-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 BEN78_12605 578e09ee5cdf417e52300d343e9daea7 450 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 141 161 - T 13-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 BEN78_12605 578e09ee5cdf417e52300d343e9daea7 450 Gene3D G3DSA:3.40.50.12160 7 122 2.2E-27 T 13-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily BEN78_12605 578e09ee5cdf417e52300d343e9daea7 450 Pfam PF04055 Radical SAM superfamily 143 326 2.5E-29 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BEN78_12605 578e09ee5cdf417e52300d343e9daea7 450 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 7 443 6.6E-98 T 13-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 BEN78_12605 578e09ee5cdf417e52300d343e9daea7 450 Gene3D G3DSA:3.80.30.20 135 382 8.5E-71 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe BEN78_12605 578e09ee5cdf417e52300d343e9daea7 450 SUPERFAMILY SSF102114 119 374 1.57E-50 T 13-10-2018 BEN78_15935 130c420df93ea7fd054d914745deaaa1 190 Pfam PF02954 Bacterial regulatory protein, Fis family 143 179 1.3E-13 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BEN78_15935 130c420df93ea7fd054d914745deaaa1 190 SUPERFAMILY SSF52172 4 115 2.7E-30 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_15935 130c420df93ea7fd054d914745deaaa1 190 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 163 183 1.8E-7 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BEN78_15935 130c420df93ea7fd054d914745deaaa1 190 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 146 163 1.8E-7 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BEN78_15935 130c420df93ea7fd054d914745deaaa1 190 Pfam PF00072 Response regulator receiver domain 4 111 9.6E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_15935 130c420df93ea7fd054d914745deaaa1 190 SMART SM00448 1 112 7.0E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_15935 130c420df93ea7fd054d914745deaaa1 190 SUPERFAMILY SSF46689 104 179 1.88E-16 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN78_15935 130c420df93ea7fd054d914745deaaa1 190 Gene3D G3DSA:3.40.50.2300 2 116 1.4E-27 T 13-10-2018 BEN78_15935 130c420df93ea7fd054d914745deaaa1 190 Gene3D G3DSA:1.10.10.60 134 181 2.1E-21 T 13-10-2018 BEN78_11030 e8fb0781567ebb26953cf2c639b65863 142 SUPERFAMILY SSF46906 68 141 4.84E-24 T 13-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily BEN78_11030 e8fb0781567ebb26953cf2c639b65863 142 SMART SM00649 9 141 9.0E-81 T 13-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 BEN78_11030 e8fb0781567ebb26953cf2c639b65863 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.38 T 13-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 BEN78_11030 e8fb0781567ebb26953cf2c639b65863 142 SUPERFAMILY SSF54747 3 72 6.02E-29 T 13-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily BEN78_11030 e8fb0781567ebb26953cf2c639b65863 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 2.3E-28 T 13-10-2018 IPR020784 Ribosomal protein L11, N-terminal BEN78_11030 e8fb0781567ebb26953cf2c639b65863 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 4.1E-63 T 13-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_11030 e8fb0781567ebb26953cf2c639b65863 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 2.3E-22 T 13-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 BEN78_11030 e8fb0781567ebb26953cf2c639b65863 142 Gene3D G3DSA:1.10.10.250 73 141 1.2E-25 T 13-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily BEN78_11030 e8fb0781567ebb26953cf2c639b65863 142 Gene3D G3DSA:3.30.1550.10 2 72 7.1E-34 T 13-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily BEN78_11030 e8fb0781567ebb26953cf2c639b65863 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 13-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11030 e8fb0781567ebb26953cf2c639b65863 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 72 2.0E-15 T 13-10-2018 BEN78_00680 4ae1ebef926be9d1f52e7ec8e078bf3f 692 Pfam PF00575 S1 RNA binding domain 36 117 1.8E-12 T 13-10-2018 IPR003029 S1 domain GO:0003676 BEN78_00680 4ae1ebef926be9d1f52e7ec8e078bf3f 692 Gene3D G3DSA:3.40.1260.20 399 507 2.4E-35 T 13-10-2018 BEN78_00680 4ae1ebef926be9d1f52e7ec8e078bf3f 692 SUPERFAMILY SSF50249 40 124 5.04E-18 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN78_00680 4ae1ebef926be9d1f52e7ec8e078bf3f 692 SMART SM00316 37 118 1.5E-10 T 13-10-2018 IPR022967 RNA-binding domain, S1 BEN78_00680 4ae1ebef926be9d1f52e7ec8e078bf3f 692 Gene3D G3DSA:2.40.50.140 31 124 3.8E-31 T 13-10-2018 BEN78_00680 4ae1ebef926be9d1f52e7ec8e078bf3f 692 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 423 6.3E-163 T 13-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 BEN78_00680 4ae1ebef926be9d1f52e7ec8e078bf3f 692 Hamap MF_00970 Ribonuclease E [rne]. 1 691 30.542 T 13-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 BEN78_00680 4ae1ebef926be9d1f52e7ec8e078bf3f 692 Pfam PF10150 Ribonuclease E/G family 120 389 6.5E-97 T 13-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 BEN78_16725 ab57acae8a66e9fd0653f02961c6b86d 438 TIGRFAM TIGR00761 argB: acetylglutamate kinase 39 259 1.2E-62 T 13-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BEN78_16725 ab57acae8a66e9fd0653f02961c6b86d 438 Pfam PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase 272 430 1.7E-49 T 13-10-2018 IPR006855 Vertebrate-like NAGS Gcn5-related N-acetyltransferase (GNAT) domain KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|Reactome: R-HSA-70635 BEN78_16725 ab57acae8a66e9fd0653f02961c6b86d 438 Gene3D G3DSA:3.40.1160.10 1 292 3.8E-97 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BEN78_16725 ab57acae8a66e9fd0653f02961c6b86d 438 PIRSF PIRSF036441 18 438 5.4E-259 T 13-10-2018 IPR011242 Acetylglutamate kinase ArgB, GNAT domain-containing GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BEN78_16725 ab57acae8a66e9fd0653f02961c6b86d 438 Pfam PF00696 Amino acid kinase family 40 256 3.1E-28 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 BEN78_16725 ab57acae8a66e9fd0653f02961c6b86d 438 SUPERFAMILY SSF53633 12 290 5.45E-53 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BEN78_16725 ab57acae8a66e9fd0653f02961c6b86d 438 Gene3D G3DSA:3.40.630.30 293 438 8.6E-54 T 13-10-2018 BEN78_16725 ab57acae8a66e9fd0653f02961c6b86d 438 SUPERFAMILY SSF55729 301 396 2.76E-7 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN78_11345 7fa96f51c8a0520a8edefd155b10a626 397 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 4 395 6.8E-223 T 13-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 BEN78_11345 7fa96f51c8a0520a8edefd155b10a626 397 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 1 393 52.766 T 13-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 BEN78_11345 7fa96f51c8a0520a8edefd155b10a626 397 Pfam PF00155 Aminotransferase class I and II 41 384 4.9E-68 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BEN78_11345 7fa96f51c8a0520a8edefd155b10a626 397 Gene3D G3DSA:3.90.1150.10 36 386 5.4E-131 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN78_11345 7fa96f51c8a0520a8edefd155b10a626 397 Gene3D G3DSA:3.40.640.10 56 294 5.4E-131 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN78_11345 7fa96f51c8a0520a8edefd155b10a626 397 SUPERFAMILY SSF53383 5 393 2.1E-118 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_00395 b2244b10a65bafc96907ac7483d2a56b 133 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 49 96 9.1E-11 T 13-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 BEN78_00395 b2244b10a65bafc96907ac7483d2a56b 133 Pfam PF02627 Carboxymuconolactone decarboxylase family 33 113 1.1E-16 T 13-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 BEN78_00395 b2244b10a65bafc96907ac7483d2a56b 133 SUPERFAMILY SSF69118 7 113 1.96E-24 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 BEN78_00395 b2244b10a65bafc96907ac7483d2a56b 133 Gene3D G3DSA:1.20.1290.10 6 126 4.2E-34 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 BEN78_09415 868c78f770706ced885e4bb6fe539676 283 Pfam PF13506 Glycosyl transferase family 21 163 227 2.6E-5 T 13-10-2018 IPR025993 Ceramide glucosyltransferase GO:0016757 KEGG: 00600+2.4.1.80|MetaCyc: PWY-5129|MetaCyc: PWY-7836|MetaCyc: PWY-7838|MetaCyc: PWY-7839|MetaCyc: PWY-7841|Reactome: R-HSA-1660662 BEN78_09415 868c78f770706ced885e4bb6fe539676 283 Pfam PF00535 Glycosyl transferase family 2 15 125 2.4E-19 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BEN78_09415 868c78f770706ced885e4bb6fe539676 283 Gene3D G3DSA:3.90.550.10 2 235 1.2E-37 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_09415 868c78f770706ced885e4bb6fe539676 283 SUPERFAMILY SSF53448 9 255 2.89E-44 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_05740 0688564d94184a2285f2f3460bbb41cb 381 Gene3D G3DSA:3.30.70.360 179 293 1.8E-122 T 13-10-2018 BEN78_05740 0688564d94184a2285f2f3460bbb41cb 381 Pfam PF07687 Peptidase dimerisation domain 181 278 6.6E-11 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain BEN78_05740 0688564d94184a2285f2f3460bbb41cb 381 Pfam PF01546 Peptidase family M20/M25/M40 71 377 6.3E-30 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 BEN78_05740 0688564d94184a2285f2f3460bbb41cb 381 PIRSF PIRSF005962 1 381 4.8E-118 T 13-10-2018 IPR017439 Amidohydrolase GO:0016787 BEN78_05740 0688564d94184a2285f2f3460bbb41cb 381 SUPERFAMILY SSF53187 4 380 2.98E-80 T 13-10-2018 BEN78_05740 0688564d94184a2285f2f3460bbb41cb 381 Gene3D G3DSA:3.40.630.10 13 365 1.8E-122 T 13-10-2018 BEN78_05740 0688564d94184a2285f2f3460bbb41cb 381 SUPERFAMILY SSF55031 182 292 1.05E-27 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain BEN78_05740 0688564d94184a2285f2f3460bbb41cb 381 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 12 368 1.2E-100 T 13-10-2018 IPR017439 Amidohydrolase GO:0016787 BEN78_08375 49cdfe1bdb5519c43187884a9b2fd8b5 371 Gene3D G3DSA:2.40.50.100 54 200 1.6E-71 T 13-10-2018 BEN78_08375 49cdfe1bdb5519c43187884a9b2fd8b5 371 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 31 352 2.8E-69 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BEN78_08375 49cdfe1bdb5519c43187884a9b2fd8b5 371 SUPERFAMILY SSF111369 45 259 5.62E-25 T 13-10-2018 BEN78_08375 49cdfe1bdb5519c43187884a9b2fd8b5 371 Gene3D G3DSA:2.40.420.20 278 350 1.6E-71 T 13-10-2018 BEN78_08375 49cdfe1bdb5519c43187884a9b2fd8b5 371 Gene3D G3DSA:2.40.30.170 44 277 1.6E-71 T 13-10-2018 BEN78_08375 49cdfe1bdb5519c43187884a9b2fd8b5 371 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 55 259 6.8E-19 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BEN78_08375 49cdfe1bdb5519c43187884a9b2fd8b5 371 Gene3D G3DSA:1.10.287.470 88 153 1.6E-71 T 13-10-2018 BEN78_15670 603cd379120e316079473a2200330bef 404 SUPERFAMILY SSF50182 186 252 3.27E-12 T 13-10-2018 IPR010920 LSM domain superfamily BEN78_15670 603cd379120e316079473a2200330bef 404 SUPERFAMILY SSF82689 253 352 1.96E-14 T 13-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 BEN78_15670 603cd379120e316079473a2200330bef 404 Gene3D G3DSA:2.30.30.60 202 251 9.0E-6 T 13-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily BEN78_15670 603cd379120e316079473a2200330bef 404 Pfam PF00924 Mechanosensitive ion channel 143 342 2.0E-28 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 BEN78_15670 603cd379120e316079473a2200330bef 404 Gene3D G3DSA:3.30.70.100 252 345 1.8E-9 T 13-10-2018 BEN78_08915 2d6d750b19484c6e19ede90ef5773980 376 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 81 370 4.2E-107 T 13-10-2018 IPR011757 Lytic transglycosylase MltB BEN78_08915 2d6d750b19484c6e19ede90ef5773980 376 Pfam PF13406 Transglycosylase SLT domain 76 368 4.6E-92 T 13-10-2018 IPR031304 Transglycosylase SLT domain 2 BEN78_08915 2d6d750b19484c6e19ede90ef5773980 376 SUPERFAMILY SSF53955 78 373 1.08E-84 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily BEN78_08915 2d6d750b19484c6e19ede90ef5773980 376 Gene3D G3DSA:1.10.530.10 118 367 8.9E-102 T 13-10-2018 BEN78_08915 2d6d750b19484c6e19ede90ef5773980 376 Gene3D G3DSA:1.10.8.350 85 253 8.9E-102 T 13-10-2018 BEN78_11010 5fea6855887a3b6b9534af389d153acd 396 SUPERFAMILY SSF50447 207 303 2.16E-31 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BEN78_11010 5fea6855887a3b6b9534af389d153acd 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site BEN78_11010 5fea6855887a3b6b9534af389d153acd 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 9.0E-19 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 BEN78_11010 5fea6855887a3b6b9534af389d153acd 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.056 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BEN78_11010 5fea6855887a3b6b9534af389d153acd 396 Gene3D G3DSA:3.40.50.300 1 205 1.1E-68 T 13-10-2018 BEN78_11010 5fea6855887a3b6b9534af389d153acd 396 SUPERFAMILY SSF50465 300 395 2.71E-36 T 13-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal BEN78_11010 5fea6855887a3b6b9534af389d153acd 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 1.3E-226 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BEN78_11010 5fea6855887a3b6b9534af389d153acd 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 7.5E-34 T 13-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal BEN78_11010 5fea6855887a3b6b9534af389d153acd 396 Gene3D G3DSA:2.40.30.10 208 336 9.8E-54 T 13-10-2018 BEN78_11010 5fea6855887a3b6b9534af389d153acd 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 5.7E-56 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN78_11010 5fea6855887a3b6b9534af389d153acd 396 SUPERFAMILY SSF52540 5 221 4.12E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_11010 5fea6855887a3b6b9534af389d153acd 396 Gene3D G3DSA:2.40.30.10 340 395 2.6E-29 T 13-10-2018 BEN78_11010 5fea6855887a3b6b9534af389d153acd 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 150 4.3E-14 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BEN78_11010 5fea6855887a3b6b9534af389d153acd 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.9E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN78_11010 5fea6855887a3b6b9534af389d153acd 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.9E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN78_11010 5fea6855887a3b6b9534af389d153acd 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.9E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN78_11010 5fea6855887a3b6b9534af389d153acd 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.9E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN78_11010 5fea6855887a3b6b9534af389d153acd 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.9E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN78_11075 5fea6855887a3b6b9534af389d153acd 396 SUPERFAMILY SSF50447 207 303 2.16E-31 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BEN78_11075 5fea6855887a3b6b9534af389d153acd 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site BEN78_11075 5fea6855887a3b6b9534af389d153acd 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 9.0E-19 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 BEN78_11075 5fea6855887a3b6b9534af389d153acd 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.056 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BEN78_11075 5fea6855887a3b6b9534af389d153acd 396 Gene3D G3DSA:3.40.50.300 1 205 1.1E-68 T 13-10-2018 BEN78_11075 5fea6855887a3b6b9534af389d153acd 396 SUPERFAMILY SSF50465 300 395 2.71E-36 T 13-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal BEN78_11075 5fea6855887a3b6b9534af389d153acd 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 1.3E-226 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BEN78_11075 5fea6855887a3b6b9534af389d153acd 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 7.5E-34 T 13-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal BEN78_11075 5fea6855887a3b6b9534af389d153acd 396 Gene3D G3DSA:2.40.30.10 208 336 9.8E-54 T 13-10-2018 BEN78_11075 5fea6855887a3b6b9534af389d153acd 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 5.7E-56 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN78_11075 5fea6855887a3b6b9534af389d153acd 396 SUPERFAMILY SSF52540 5 221 4.12E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_11075 5fea6855887a3b6b9534af389d153acd 396 Gene3D G3DSA:2.40.30.10 340 395 2.6E-29 T 13-10-2018 BEN78_11075 5fea6855887a3b6b9534af389d153acd 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 150 4.3E-14 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BEN78_11075 5fea6855887a3b6b9534af389d153acd 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.9E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN78_11075 5fea6855887a3b6b9534af389d153acd 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.9E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN78_11075 5fea6855887a3b6b9534af389d153acd 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.9E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN78_11075 5fea6855887a3b6b9534af389d153acd 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.9E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN78_11075 5fea6855887a3b6b9534af389d153acd 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.9E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN78_12915 d3b378568ab6bfcaa367ecc23b8c74df 293 Pfam PF13622 Thioesterase-like superfamily 27 282 2.2E-62 T 13-10-2018 BEN78_12915 d3b378568ab6bfcaa367ecc23b8c74df 293 SUPERFAMILY SSF54637 117 283 4.79E-55 T 13-10-2018 IPR029069 HotDog domain superfamily BEN78_12915 d3b378568ab6bfcaa367ecc23b8c74df 293 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 6.8E-89 T 13-10-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 BEN78_12915 d3b378568ab6bfcaa367ecc23b8c74df 293 Gene3D G3DSA:3.10.129.90 3 286 2.8E-102 T 13-10-2018 BEN78_12915 d3b378568ab6bfcaa367ecc23b8c74df 293 SUPERFAMILY SSF54637 4 114 1.4E-38 T 13-10-2018 IPR029069 HotDog domain superfamily BEN78_06710 8b9e16937c66ead20bb7dfbe2d89f70e 372 Gene3D G3DSA:1.10.287.130 136 190 3.0E-10 T 13-10-2018 BEN78_06710 8b9e16937c66ead20bb7dfbe2d89f70e 372 SMART SM00388 131 196 8.3E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_06710 8b9e16937c66ead20bb7dfbe2d89f70e 372 SUPERFAMILY SSF55785 16 71 2.47E-6 T 13-10-2018 IPR035965 PAS domain superfamily BEN78_06710 8b9e16937c66ead20bb7dfbe2d89f70e 372 PRINTS PR00344 Bacterial sensor protein C-terminal signature 309 327 1.3E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_06710 8b9e16937c66ead20bb7dfbe2d89f70e 372 PRINTS PR00344 Bacterial sensor protein C-terminal signature 280 294 1.3E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_06710 8b9e16937c66ead20bb7dfbe2d89f70e 372 PRINTS PR00344 Bacterial sensor protein C-terminal signature 332 345 1.3E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_06710 8b9e16937c66ead20bb7dfbe2d89f70e 372 SUPERFAMILY SSF47384 131 189 8.24E-10 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN78_06710 8b9e16937c66ead20bb7dfbe2d89f70e 372 Pfam PF00512 His Kinase A (phospho-acceptor) domain 132 189 2.5E-11 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_06710 8b9e16937c66ead20bb7dfbe2d89f70e 372 SMART SM00387 235 348 5.0E-26 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_06710 8b9e16937c66ead20bb7dfbe2d89f70e 372 SUPERFAMILY SSF55874 198 345 7.2E-31 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_06710 8b9e16937c66ead20bb7dfbe2d89f70e 372 Gene3D G3DSA:3.30.565.10 194 346 2.7E-33 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_06710 8b9e16937c66ead20bb7dfbe2d89f70e 372 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 235 346 7.1E-16 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_07060 73b74cc90d88b2bcb38bc518134cf3ce 163 Gene3D G3DSA:1.10.10.10 7 57 1.6E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_07060 73b74cc90d88b2bcb38bc518134cf3ce 163 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 53 6.4E-19 T 13-10-2018 BEN78_07060 73b74cc90d88b2bcb38bc518134cf3ce 163 SMART SM00344 7 115 3.5E-28 T 13-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 BEN78_07060 73b74cc90d88b2bcb38bc518134cf3ce 163 SUPERFAMILY SSF46785 7 61 8.78E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_07060 73b74cc90d88b2bcb38bc518134cf3ce 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 2.2E-13 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BEN78_07060 73b74cc90d88b2bcb38bc518134cf3ce 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 2.2E-13 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BEN78_07060 73b74cc90d88b2bcb38bc518134cf3ce 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 2.2E-13 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BEN78_07060 73b74cc90d88b2bcb38bc518134cf3ce 163 ProSitePatterns PS00519 AsnC-type HTH domain signature. 24 50 - T 13-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site BEN78_07060 73b74cc90d88b2bcb38bc518134cf3ce 163 SUPERFAMILY SSF54909 69 154 2.95E-15 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel BEN78_07060 73b74cc90d88b2bcb38bc518134cf3ce 163 Gene3D G3DSA:3.30.70.920 61 143 2.5E-17 T 13-10-2018 BEN78_07060 73b74cc90d88b2bcb38bc518134cf3ce 163 Pfam PF01037 Lrp/AsnC ligand binding domain 73 145 5.4E-16 T 13-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BEN78_11980 95ca03d4a094cf5511c618379a837efc 917 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 229 373 1.2E-63 T 13-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 BEN78_11980 95ca03d4a094cf5511c618379a837efc 917 Gene3D G3DSA:1.10.730.10 681 853 6.4E-59 T 13-10-2018 BEN78_11980 95ca03d4a094cf5511c618379a837efc 917 Gene3D G3DSA:3.40.50.620 40 243 1.8E-74 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_11980 95ca03d4a094cf5511c618379a837efc 917 PRINTS PR00985 Leucyl-tRNA synthetase signature 161 177 4.5E-46 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BEN78_11980 95ca03d4a094cf5511c618379a837efc 917 PRINTS PR00985 Leucyl-tRNA synthetase signature 542 560 4.5E-46 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BEN78_11980 95ca03d4a094cf5511c618379a837efc 917 PRINTS PR00985 Leucyl-tRNA synthetase signature 223 242 4.5E-46 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BEN78_11980 95ca03d4a094cf5511c618379a837efc 917 PRINTS PR00985 Leucyl-tRNA synthetase signature 579 601 4.5E-46 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BEN78_11980 95ca03d4a094cf5511c618379a837efc 917 PRINTS PR00985 Leucyl-tRNA synthetase signature 193 206 4.5E-46 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BEN78_11980 95ca03d4a094cf5511c618379a837efc 917 PRINTS PR00985 Leucyl-tRNA synthetase signature 612 622 4.5E-46 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BEN78_11980 95ca03d4a094cf5511c618379a837efc 917 PRINTS PR00985 Leucyl-tRNA synthetase signature 135 152 4.5E-46 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BEN78_11980 95ca03d4a094cf5511c618379a837efc 917 Pfam PF08264 Anticodon-binding domain of tRNA 755 880 9.0E-17 T 13-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 BEN78_11980 95ca03d4a094cf5511c618379a837efc 917 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 12 916 23.129 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BEN78_11980 95ca03d4a094cf5511c618379a837efc 917 SUPERFAMILY SSF47323 719 915 3.55E-36 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN78_11980 95ca03d4a094cf5511c618379a837efc 917 Gene3D G3DSA:3.40.50.620 460 626 3.2E-33 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_11980 95ca03d4a094cf5511c618379a837efc 917 Gene3D G3DSA:3.10.330.110 627 680 2.0E-26 T 13-10-2018 BEN78_11980 95ca03d4a094cf5511c618379a837efc 917 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 468 627 1.5E-7 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN78_11980 95ca03d4a094cf5511c618379a837efc 917 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 23 179 2.0E-25 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN78_11980 95ca03d4a094cf5511c618379a837efc 917 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 674 712 7.9E-7 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN78_11980 95ca03d4a094cf5511c618379a837efc 917 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 50 61 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN78_11980 95ca03d4a094cf5511c618379a837efc 917 Gene3D G3DSA:3.10.20.590 855 917 7.4E-23 T 13-10-2018 BEN78_11980 95ca03d4a094cf5511c618379a837efc 917 SUPERFAMILY SSF50677 234 465 3.49E-47 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BEN78_11980 95ca03d4a094cf5511c618379a837efc 917 SUPERFAMILY SSF52374 13 722 2.21E-144 T 13-10-2018 BEN78_11980 95ca03d4a094cf5511c618379a837efc 917 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 13 371 1.8E-168 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BEN78_03370 c1968f4342f366cfb564f7b3a3c12909 367 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 6 341 2.4E-134 T 13-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 BEN78_03370 c1968f4342f366cfb564f7b3a3c12909 367 Gene3D G3DSA:3.30.450.90 1 100 7.5E-30 T 13-10-2018 BEN78_03370 c1968f4342f366cfb564f7b3a3c12909 367 Pfam PF00437 Type II/IV secretion system protein 8 269 1.6E-36 T 13-10-2018 IPR001482 Type II/IV secretion system protein BEN78_03370 c1968f4342f366cfb564f7b3a3c12909 367 SUPERFAMILY SSF52540 5 337 2.3E-65 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_03370 c1968f4342f366cfb564f7b3a3c12909 367 SMART SM00382 122 304 0.0014 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_03370 c1968f4342f366cfb564f7b3a3c12909 367 Gene3D G3DSA:3.40.50.300 101 353 5.9E-89 T 13-10-2018 BEN78_14210 73cef8e2e20fa9f4b126505be0155c7d 641 Pfam PF00012 Hsp70 protein 4 602 1.0E-261 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BEN78_14210 73cef8e2e20fa9f4b126505be0155c7d 641 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 338 352 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 BEN78_14210 73cef8e2e20fa9f4b126505be0155c7d 641 Gene3D G3DSA:1.20.1270.10 525 603 7.0E-22 T 13-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 BEN78_14210 73cef8e2e20fa9f4b126505be0155c7d 641 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 634 36.269 T 13-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 BEN78_14210 73cef8e2e20fa9f4b126505be0155c7d 641 SUPERFAMILY SSF53067 188 383 2.53E-67 T 13-10-2018 BEN78_14210 73cef8e2e20fa9f4b126505be0155c7d 641 PRINTS PR00301 70kDa heat shock protein signature 3 16 2.1E-81 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BEN78_14210 73cef8e2e20fa9f4b126505be0155c7d 641 PRINTS PR00301 70kDa heat shock protein signature 199 209 2.1E-81 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BEN78_14210 73cef8e2e20fa9f4b126505be0155c7d 641 PRINTS PR00301 70kDa heat shock protein signature 31 43 2.1E-81 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BEN78_14210 73cef8e2e20fa9f4b126505be0155c7d 641 PRINTS PR00301 70kDa heat shock protein signature 139 159 2.1E-81 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BEN78_14210 73cef8e2e20fa9f4b126505be0155c7d 641 PRINTS PR00301 70kDa heat shock protein signature 470 486 2.1E-81 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BEN78_14210 73cef8e2e20fa9f4b126505be0155c7d 641 PRINTS PR00301 70kDa heat shock protein signature 54 62 2.1E-81 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BEN78_14210 73cef8e2e20fa9f4b126505be0155c7d 641 PRINTS PR00301 70kDa heat shock protein signature 389 408 2.1E-81 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BEN78_14210 73cef8e2e20fa9f4b126505be0155c7d 641 PRINTS PR00301 70kDa heat shock protein signature 335 351 2.1E-81 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BEN78_14210 73cef8e2e20fa9f4b126505be0155c7d 641 PRINTS PR00301 70kDa heat shock protein signature 366 386 2.1E-81 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BEN78_14210 73cef8e2e20fa9f4b126505be0155c7d 641 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 193 206 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 BEN78_14210 73cef8e2e20fa9f4b126505be0155c7d 641 Gene3D G3DSA:3.30.420.40 5 380 1.2E-166 T 13-10-2018 BEN78_14210 73cef8e2e20fa9f4b126505be0155c7d 641 Gene3D G3DSA:2.60.34.10 384 524 4.2E-62 T 13-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 BEN78_14210 73cef8e2e20fa9f4b126505be0155c7d 641 Gene3D G3DSA:3.90.640.10 230 317 1.2E-166 T 13-10-2018 BEN78_14210 73cef8e2e20fa9f4b126505be0155c7d 641 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 BEN78_14210 73cef8e2e20fa9f4b126505be0155c7d 641 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 2.0E-285 T 13-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 BEN78_14210 73cef8e2e20fa9f4b126505be0155c7d 641 SUPERFAMILY SSF100920 385 541 5.89E-59 T 13-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 BEN78_14210 73cef8e2e20fa9f4b126505be0155c7d 641 SUPERFAMILY SSF53067 2 184 4.14E-66 T 13-10-2018 BEN78_14210 73cef8e2e20fa9f4b126505be0155c7d 641 Gene3D G3DSA:3.30.420.40 181 367 1.2E-166 T 13-10-2018 BEN78_09995 d96c9d51b7b5efd80944f1c869d6bf9e 190 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 167 185 1.1E-12 T 13-10-2018 IPR002177 DNA-binding protein Dps BEN78_09995 d96c9d51b7b5efd80944f1c869d6bf9e 190 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 93 109 1.1E-12 T 13-10-2018 IPR002177 DNA-binding protein Dps BEN78_09995 d96c9d51b7b5efd80944f1c869d6bf9e 190 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 69 85 1.1E-12 T 13-10-2018 IPR002177 DNA-binding protein Dps BEN78_09995 d96c9d51b7b5efd80944f1c869d6bf9e 190 Pfam PF00210 Ferritin-like domain 50 190 8.9E-30 T 13-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 BEN78_09995 d96c9d51b7b5efd80944f1c869d6bf9e 190 Gene3D G3DSA:1.20.1260.10 26 190 4.8E-60 T 13-10-2018 IPR012347 Ferritin-like BEN78_09995 d96c9d51b7b5efd80944f1c869d6bf9e 190 ProSitePatterns PS00818 Dps protein family signature 1. 69 85 - T 13-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 BEN78_09995 d96c9d51b7b5efd80944f1c869d6bf9e 190 ProSitePatterns PS00819 Dps protein family signature 2. 95 109 - T 13-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 BEN78_09995 d96c9d51b7b5efd80944f1c869d6bf9e 190 PIRSF PIRSF005900 27 190 5.8E-48 T 13-10-2018 IPR002177 DNA-binding protein Dps BEN78_09995 d96c9d51b7b5efd80944f1c869d6bf9e 190 SUPERFAMILY SSF47240 36 190 1.59E-47 T 13-10-2018 IPR009078 Ferritin-like superfamily BEN78_01775 8f7d7ae6b0127a8f411b11eb8df888fa 635 Gene3D G3DSA:3.30.54.20 130 187 5.2E-59 T 13-10-2018 BEN78_01775 8f7d7ae6b0127a8f411b11eb8df888fa 635 Gene3D G3DSA:3.10.20.30 1 63 1.4E-24 T 13-10-2018 IPR012675 Beta-grasp domain superfamily BEN78_01775 8f7d7ae6b0127a8f411b11eb8df888fa 635 Gene3D G3DSA:3.40.50.800 532 633 6.3E-30 T 13-10-2018 IPR036621 Anticodon-binding domain superfamily BEN78_01775 8f7d7ae6b0127a8f411b11eb8df888fa 635 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 219 7.0E-15 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 BEN78_01775 8f7d7ae6b0127a8f411b11eb8df888fa 635 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 33.749 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BEN78_01775 8f7d7ae6b0127a8f411b11eb8df888fa 635 SMART SM00863 170 219 1.4E-20 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 BEN78_01775 8f7d7ae6b0127a8f411b11eb8df888fa 635 SUPERFAMILY SSF55681 243 526 1.91E-94 T 13-10-2018 BEN78_01775 8f7d7ae6b0127a8f411b11eb8df888fa 635 SUPERFAMILY SSF81271 2 61 4.58E-16 T 13-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 BEN78_01775 8f7d7ae6b0127a8f411b11eb8df888fa 635 Gene3D G3DSA:3.30.980.10 69 222 5.2E-59 T 13-10-2018 BEN78_01775 8f7d7ae6b0127a8f411b11eb8df888fa 635 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 3.0E-217 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BEN78_01775 8f7d7ae6b0127a8f411b11eb8df888fa 635 Gene3D G3DSA:3.30.930.10 223 531 5.2E-124 T 13-10-2018 BEN78_01775 8f7d7ae6b0127a8f411b11eb8df888fa 635 Pfam PF02824 TGS domain 2 61 3.6E-11 T 13-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 BEN78_01775 8f7d7ae6b0127a8f411b11eb8df888fa 635 Pfam PF03129 Anticodon binding domain 541 630 1.9E-20 T 13-10-2018 IPR004154 Anticodon-binding BEN78_01775 8f7d7ae6b0127a8f411b11eb8df888fa 635 SUPERFAMILY SSF52954 530 630 3.17E-31 T 13-10-2018 BEN78_01775 8f7d7ae6b0127a8f411b11eb8df888fa 635 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 321 529 8.6E-40 T 13-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN78_01775 8f7d7ae6b0127a8f411b11eb8df888fa 635 SUPERFAMILY SSF55186 63 241 2.88E-64 T 13-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 BEN78_01775 8f7d7ae6b0127a8f411b11eb8df888fa 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 5.9E-51 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BEN78_01775 8f7d7ae6b0127a8f411b11eb8df888fa 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 5.9E-51 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BEN78_01775 8f7d7ae6b0127a8f411b11eb8df888fa 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 5.9E-51 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BEN78_01775 8f7d7ae6b0127a8f411b11eb8df888fa 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 5.9E-51 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BEN78_01775 8f7d7ae6b0127a8f411b11eb8df888fa 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 5.9E-51 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BEN78_13560 d34d69ea8234e3beb66baa23119e082d 414 SUPERFAMILY SSF51230 1 92 3.93E-26 T 13-10-2018 IPR011053 Single hybrid motif BEN78_13560 d34d69ea8234e3beb66baa23119e082d 414 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 BEN78_13560 d34d69ea8234e3beb66baa23119e082d 414 Pfam PF02817 e3 binding domain 137 168 1.8E-8 T 13-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 BEN78_13560 d34d69ea8234e3beb66baa23119e082d 414 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 413 1.5E-173 T 13-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 BEN78_13560 d34d69ea8234e3beb66baa23119e082d 414 Gene3D G3DSA:2.40.50.100 1 101 2.2E-23 T 13-10-2018 BEN78_13560 d34d69ea8234e3beb66baa23119e082d 414 SUPERFAMILY SSF52777 184 413 3.16E-90 T 13-10-2018 BEN78_13560 d34d69ea8234e3beb66baa23119e082d 414 Pfam PF00364 Biotin-requiring enzyme 4 76 7.0E-19 T 13-10-2018 IPR000089 Biotin/lipoyl attachment BEN78_13560 d34d69ea8234e3beb66baa23119e082d 414 Gene3D G3DSA:4.10.320.10 128 178 1.1E-10 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 BEN78_13560 d34d69ea8234e3beb66baa23119e082d 414 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 184 412 5.9E-86 T 13-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 BEN78_13560 d34d69ea8234e3beb66baa23119e082d 414 SUPERFAMILY SSF47005 129 172 8.76E-9 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 BEN78_13560 d34d69ea8234e3beb66baa23119e082d 414 Gene3D G3DSA:3.30.559.10 182 414 1.2E-96 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BEN78_16575 4814df52080210b382fce13360fa6e23 442 Pfam PF02601 Exonuclease VII, large subunit 125 439 6.7E-95 T 13-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 BEN78_16575 4814df52080210b382fce13360fa6e23 442 Pfam PF13742 OB-fold nucleic acid binding domain 12 101 6.8E-26 T 13-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 BEN78_16575 4814df52080210b382fce13360fa6e23 442 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 6 442 30.057 T 13-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 BEN78_16575 4814df52080210b382fce13360fa6e23 442 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 12 357 4.2E-127 T 13-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 BEN78_03825 934e22dae4064f992ccddb2794715cdd 602 Gene3D G3DSA:3.30.70.270 185 338 1.6E-18 T 13-10-2018 BEN78_03825 934e22dae4064f992ccddb2794715cdd 602 SUPERFAMILY SSF55073 190 332 5.34E-16 T 13-10-2018 IPR029787 Nucleotide cyclase BEN78_03825 934e22dae4064f992ccddb2794715cdd 602 Gene3D G3DSA:3.20.20.450 353 600 2.9E-45 T 13-10-2018 IPR035919 EAL domain superfamily BEN78_03825 934e22dae4064f992ccddb2794715cdd 602 Gene3D G3DSA:3.40.50.2300 41 184 3.4E-37 T 13-10-2018 BEN78_03825 934e22dae4064f992ccddb2794715cdd 602 SMART SM00052 350 594 2.7E-11 T 13-10-2018 IPR001633 EAL domain BEN78_03825 934e22dae4064f992ccddb2794715cdd 602 SUPERFAMILY SSF52172 53 184 8.97E-38 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_03825 934e22dae4064f992ccddb2794715cdd 602 SUPERFAMILY SSF141868 356 589 4.58E-39 T 13-10-2018 IPR035919 EAL domain superfamily BEN78_03825 934e22dae4064f992ccddb2794715cdd 602 SMART SM00448 55 168 3.7E-33 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_03825 934e22dae4064f992ccddb2794715cdd 602 Pfam PF00563 EAL domain 356 587 7.8E-42 T 13-10-2018 IPR001633 EAL domain BEN78_03825 934e22dae4064f992ccddb2794715cdd 602 SMART SM00267 171 339 8.8E-6 T 13-10-2018 IPR000160 GGDEF domain BEN78_03825 934e22dae4064f992ccddb2794715cdd 602 Pfam PF00990 Diguanylate cyclase, GGDEF domain 188 330 1.6E-8 T 13-10-2018 IPR000160 GGDEF domain BEN78_03825 934e22dae4064f992ccddb2794715cdd 602 Pfam PF00072 Response regulator receiver domain 57 169 4.0E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_00585 a97cd8c688f6fa15f168aa0978d1e2e6 562 SUPERFAMILY SSF50249 104 186 7.55E-14 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN78_00585 a97cd8c688f6fa15f168aa0978d1e2e6 562 SUPERFAMILY SSF50249 192 276 4.85E-26 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN78_00585 a97cd8c688f6fa15f168aa0978d1e2e6 562 Gene3D G3DSA:2.40.50.140 6 98 5.4E-15 T 13-10-2018 BEN78_00585 a97cd8c688f6fa15f168aa0978d1e2e6 562 Gene3D G3DSA:2.40.50.140 359 446 1.6E-24 T 13-10-2018 BEN78_00585 a97cd8c688f6fa15f168aa0978d1e2e6 562 Gene3D G3DSA:2.40.50.140 270 358 7.2E-30 T 13-10-2018 BEN78_00585 a97cd8c688f6fa15f168aa0978d1e2e6 562 Gene3D G3DSA:2.40.50.140 99 184 1.3E-7 T 13-10-2018 BEN78_00585 a97cd8c688f6fa15f168aa0978d1e2e6 562 SUPERFAMILY SSF50249 430 537 3.86E-21 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN78_00585 a97cd8c688f6fa15f168aa0978d1e2e6 562 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 521 2.7E-208 T 13-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 BEN78_00585 a97cd8c688f6fa15f168aa0978d1e2e6 562 SUPERFAMILY SSF50249 1 113 6.04E-21 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN78_00585 a97cd8c688f6fa15f168aa0978d1e2e6 562 Gene3D G3DSA:2.40.50.140 188 269 3.8E-27 T 13-10-2018 BEN78_00585 a97cd8c688f6fa15f168aa0978d1e2e6 562 Gene3D G3DSA:2.40.50.140 447 528 7.8E-19 T 13-10-2018 BEN78_00585 a97cd8c688f6fa15f168aa0978d1e2e6 562 PIRSF PIRSF002111 1 535 8.9E-210 T 13-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 BEN78_00585 a97cd8c688f6fa15f168aa0978d1e2e6 562 SMART SM00316 20 88 5.6E-6 T 13-10-2018 IPR022967 RNA-binding domain, S1 BEN78_00585 a97cd8c688f6fa15f168aa0978d1e2e6 562 SMART SM00316 191 261 5.6E-28 T 13-10-2018 IPR022967 RNA-binding domain, S1 BEN78_00585 a97cd8c688f6fa15f168aa0978d1e2e6 562 SMART SM00316 104 172 4.5E-9 T 13-10-2018 IPR022967 RNA-binding domain, S1 BEN78_00585 a97cd8c688f6fa15f168aa0978d1e2e6 562 SMART SM00316 363 435 3.3E-23 T 13-10-2018 IPR022967 RNA-binding domain, S1 BEN78_00585 a97cd8c688f6fa15f168aa0978d1e2e6 562 SMART SM00316 450 521 4.2E-18 T 13-10-2018 IPR022967 RNA-binding domain, S1 BEN78_00585 a97cd8c688f6fa15f168aa0978d1e2e6 562 SMART SM00316 276 348 2.2E-26 T 13-10-2018 IPR022967 RNA-binding domain, S1 BEN78_00585 a97cd8c688f6fa15f168aa0978d1e2e6 562 SUPERFAMILY SSF50249 256 365 2.93E-28 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN78_00585 a97cd8c688f6fa15f168aa0978d1e2e6 562 SUPERFAMILY SSF50249 363 448 8.95E-22 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN78_00585 a97cd8c688f6fa15f168aa0978d1e2e6 562 PRINTS PR00681 Ribosomal protein S1 signature 109 125 6.9E-86 T 13-10-2018 BEN78_00585 a97cd8c688f6fa15f168aa0978d1e2e6 562 PRINTS PR00681 Ribosomal protein S1 signature 331 349 6.9E-86 T 13-10-2018 BEN78_00585 a97cd8c688f6fa15f168aa0978d1e2e6 562 PRINTS PR00681 Ribosomal protein S1 signature 156 176 6.9E-86 T 13-10-2018 BEN78_00585 a97cd8c688f6fa15f168aa0978d1e2e6 562 PRINTS PR00681 Ribosomal protein S1 signature 127 144 6.9E-86 T 13-10-2018 BEN78_00585 a97cd8c688f6fa15f168aa0978d1e2e6 562 PRINTS PR00681 Ribosomal protein S1 signature 291 310 6.9E-86 T 13-10-2018 BEN78_00585 a97cd8c688f6fa15f168aa0978d1e2e6 562 PRINTS PR00681 Ribosomal protein S1 signature 22 40 6.9E-86 T 13-10-2018 BEN78_00585 a97cd8c688f6fa15f168aa0978d1e2e6 562 PRINTS PR00681 Ribosomal protein S1 signature 85 104 6.9E-86 T 13-10-2018 BEN78_00585 a97cd8c688f6fa15f168aa0978d1e2e6 562 PRINTS PR00681 Ribosomal protein S1 signature 213 234 6.9E-86 T 13-10-2018 BEN78_00585 a97cd8c688f6fa15f168aa0978d1e2e6 562 PRINTS PR00681 Ribosomal protein S1 signature 40 54 6.9E-86 T 13-10-2018 BEN78_00585 a97cd8c688f6fa15f168aa0978d1e2e6 562 Pfam PF00575 S1 RNA binding domain 192 261 1.2E-21 T 13-10-2018 IPR003029 S1 domain GO:0003676 BEN78_00585 a97cd8c688f6fa15f168aa0978d1e2e6 562 Pfam PF00575 S1 RNA binding domain 104 172 2.6E-11 T 13-10-2018 IPR003029 S1 domain GO:0003676 BEN78_00585 a97cd8c688f6fa15f168aa0978d1e2e6 562 Pfam PF00575 S1 RNA binding domain 277 348 8.3E-23 T 13-10-2018 IPR003029 S1 domain GO:0003676 BEN78_00585 a97cd8c688f6fa15f168aa0978d1e2e6 562 Pfam PF00575 S1 RNA binding domain 452 521 4.0E-14 T 13-10-2018 IPR003029 S1 domain GO:0003676 BEN78_00585 a97cd8c688f6fa15f168aa0978d1e2e6 562 Pfam PF00575 S1 RNA binding domain 18 87 2.6E-5 T 13-10-2018 IPR003029 S1 domain GO:0003676 BEN78_00585 a97cd8c688f6fa15f168aa0978d1e2e6 562 Pfam PF00575 S1 RNA binding domain 362 435 7.5E-20 T 13-10-2018 IPR003029 S1 domain GO:0003676 BEN78_06365 f675caef621888d9038e9c08bacec48c 365 Gene3D G3DSA:3.80.30.30 134 251 6.4E-9 T 13-10-2018 BEN78_06365 f675caef621888d9038e9c08bacec48c 365 Pfam PF04055 Radical SAM superfamily 79 256 1.3E-11 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BEN78_06365 f675caef621888d9038e9c08bacec48c 365 SUPERFAMILY SSF102114 55 282 1.83E-13 T 13-10-2018 BEN78_06365 f675caef621888d9038e9c08bacec48c 365 SMART SM00729 75 300 0.0014 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BEN78_05315 443ae72fdb1950ed6b552f6350bf1b34 271 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 210 7.1E-32 T 13-10-2018 BEN78_05315 443ae72fdb1950ed6b552f6350bf1b34 271 Gene3D G3DSA:3.40.50.720 2 271 5.1E-70 T 13-10-2018 BEN78_05315 443ae72fdb1950ed6b552f6350bf1b34 271 SUPERFAMILY SSF51735 2 243 2.29E-49 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_05315 443ae72fdb1950ed6b552f6350bf1b34 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 3.4E-15 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_05315 443ae72fdb1950ed6b552f6350bf1b34 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.4E-15 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_05315 443ae72fdb1950ed6b552f6350bf1b34 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 3.4E-15 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_05315 443ae72fdb1950ed6b552f6350bf1b34 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 3.4E-15 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_09800 0141fba0bd8d86d52de2f5f6c1048eb2 718 SMART SM00052 452 698 1.9E-117 T 13-10-2018 IPR001633 EAL domain BEN78_09800 0141fba0bd8d86d52de2f5f6c1048eb2 718 Gene3D G3DSA:3.20.20.450 455 705 3.3E-97 T 13-10-2018 IPR035919 EAL domain superfamily BEN78_09800 0141fba0bd8d86d52de2f5f6c1048eb2 718 SMART SM00267 269 442 2.4E-61 T 13-10-2018 IPR000160 GGDEF domain BEN78_09800 0141fba0bd8d86d52de2f5f6c1048eb2 718 Pfam PF13426 PAS domain 167 267 1.3E-13 T 13-10-2018 IPR000014 PAS domain BEN78_09800 0141fba0bd8d86d52de2f5f6c1048eb2 718 Gene3D G3DSA:3.30.450.20 155 277 7.6E-29 T 13-10-2018 BEN78_09800 0141fba0bd8d86d52de2f5f6c1048eb2 718 Pfam PF08447 PAS fold 72 141 1.0E-11 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 BEN78_09800 0141fba0bd8d86d52de2f5f6c1048eb2 718 Pfam PF00990 Diguanylate cyclase, GGDEF domain 280 437 6.2E-46 T 13-10-2018 IPR000160 GGDEF domain BEN78_09800 0141fba0bd8d86d52de2f5f6c1048eb2 718 SUPERFAMILY SSF141868 459 705 1.44E-86 T 13-10-2018 IPR035919 EAL domain superfamily BEN78_09800 0141fba0bd8d86d52de2f5f6c1048eb2 718 SUPERFAMILY SSF55073 285 444 2.88E-45 T 13-10-2018 IPR029787 Nucleotide cyclase BEN78_09800 0141fba0bd8d86d52de2f5f6c1048eb2 718 SUPERFAMILY SSF55785 75 148 1.43E-10 T 13-10-2018 IPR035965 PAS domain superfamily BEN78_09800 0141fba0bd8d86d52de2f5f6c1048eb2 718 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 160 276 1.7E-19 T 13-10-2018 IPR000014 PAS domain BEN78_09800 0141fba0bd8d86d52de2f5f6c1048eb2 718 SMART SM00091 155 224 4.0E-5 T 13-10-2018 IPR000014 PAS domain BEN78_09800 0141fba0bd8d86d52de2f5f6c1048eb2 718 SUPERFAMILY SSF55785 166 277 3.84E-23 T 13-10-2018 IPR035965 PAS domain superfamily BEN78_09800 0141fba0bd8d86d52de2f5f6c1048eb2 718 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 278 439 7.9E-41 T 13-10-2018 IPR000160 GGDEF domain BEN78_09800 0141fba0bd8d86d52de2f5f6c1048eb2 718 Gene3D G3DSA:3.30.70.270 278 454 3.1E-57 T 13-10-2018 BEN78_09800 0141fba0bd8d86d52de2f5f6c1048eb2 718 Gene3D G3DSA:3.30.450.20 32 145 6.8E-14 T 13-10-2018 BEN78_09800 0141fba0bd8d86d52de2f5f6c1048eb2 718 SMART SM00086 227 269 0.0028 T 13-10-2018 IPR001610 PAC motif BEN78_09800 0141fba0bd8d86d52de2f5f6c1048eb2 718 SMART SM00086 104 147 0.038 T 13-10-2018 IPR001610 PAC motif BEN78_09800 0141fba0bd8d86d52de2f5f6c1048eb2 718 PIRSF PIRSF005925 144 277 2.2E-11 T 13-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase BEN78_09800 0141fba0bd8d86d52de2f5f6c1048eb2 718 PIRSF PIRSF005925 267 715 3.6E-145 T 13-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase BEN78_09800 0141fba0bd8d86d52de2f5f6c1048eb2 718 Pfam PF00563 EAL domain 459 693 7.3E-72 T 13-10-2018 IPR001633 EAL domain BEN78_14875 4b072a31b2849d5fb43a11137f62a503 792 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 18 345 7.7E-113 T 13-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 BEN78_14875 4b072a31b2849d5fb43a11137f62a503 792 Gene3D G3DSA:3.30.1490.20 2 194 4.6E-70 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BEN78_14875 4b072a31b2849d5fb43a11137f62a503 792 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 693 711 - T 13-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 BEN78_14875 4b072a31b2849d5fb43a11137f62a503 792 Gene3D G3DSA:3.50.30.10 357 476 8.6E-40 T 13-10-2018 BEN78_14875 4b072a31b2849d5fb43a11137f62a503 792 Gene3D G3DSA:3.30.470.20 195 356 5.7E-56 T 13-10-2018 BEN78_14875 4b072a31b2849d5fb43a11137f62a503 792 PIRSF PIRSF000854 1 792 0.0 T 13-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 BEN78_14875 4b072a31b2849d5fb43a11137f62a503 792 SUPERFAMILY SSF52009 348 465 2.49E-33 T 13-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 BEN78_14875 4b072a31b2849d5fb43a11137f62a503 792 SUPERFAMILY SSF51621 462 789 2.88E-96 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BEN78_14875 4b072a31b2849d5fb43a11137f62a503 792 Gene3D G3DSA:3.20.20.60 477 789 9.9E-103 T 13-10-2018 BEN78_14875 4b072a31b2849d5fb43a11137f62a503 792 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 480 786 6.0E-62 T 13-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 BEN78_14875 4b072a31b2849d5fb43a11137f62a503 792 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 5 787 0.0 T 13-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 BEN78_14875 4b072a31b2849d5fb43a11137f62a503 792 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 746 758 1.4E-5 T 13-10-2018 BEN78_14875 4b072a31b2849d5fb43a11137f62a503 792 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 693 708 1.4E-5 T 13-10-2018 BEN78_14875 4b072a31b2849d5fb43a11137f62a503 792 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 710 725 1.4E-5 T 13-10-2018 BEN78_14875 4b072a31b2849d5fb43a11137f62a503 792 Pfam PF00391 PEP-utilising enzyme, mobile domain 383 454 1.1E-25 T 13-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 BEN78_14875 4b072a31b2849d5fb43a11137f62a503 792 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 413 424 - T 13-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 BEN78_14875 4b072a31b2849d5fb43a11137f62a503 792 SUPERFAMILY SSF56059 4 383 2.12E-104 T 13-10-2018 BEN78_00290 d956640991f87491bf9bbb7428076990 101 Gene3D G3DSA:3.30.110.60 4 101 4.1E-33 T 13-10-2018 IPR035920 YhbY-like superfamily BEN78_00290 d956640991f87491bf9bbb7428076990 101 Pfam PF01985 CRS1 / YhbY (CRM) domain 5 88 8.3E-24 T 13-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 BEN78_00290 d956640991f87491bf9bbb7428076990 101 SUPERFAMILY SSF75471 4 98 4.45E-29 T 13-10-2018 IPR035920 YhbY-like superfamily BEN78_00290 d956640991f87491bf9bbb7428076990 101 SMART SM01103 5 88 4.7E-38 T 13-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 BEN78_00290 d956640991f87491bf9bbb7428076990 101 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 5 100 2.3E-27 T 13-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 BEN78_00290 d956640991f87491bf9bbb7428076990 101 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 11 100 7.0E-33 T 13-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 BEN78_13440 184764200dbb0a39349f6b60c2bee8b7 333 Gene3D G3DSA:3.40.367.20 109 313 4.0E-101 T 13-10-2018 BEN78_13440 184764200dbb0a39349f6b60c2bee8b7 333 Hamap MF_00524 Glucokinase [glk]. 6 330 33.678 T 13-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 BEN78_13440 184764200dbb0a39349f6b60c2bee8b7 333 Gene3D G3DSA:3.30.420.40 8 324 4.0E-101 T 13-10-2018 BEN78_13440 184764200dbb0a39349f6b60c2bee8b7 333 Pfam PF02685 Glucokinase 8 327 1.1E-108 T 13-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 BEN78_13440 184764200dbb0a39349f6b60c2bee8b7 333 TIGRFAM TIGR00749 glk: glucokinase 8 324 3.0E-83 T 13-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 BEN78_13440 184764200dbb0a39349f6b60c2bee8b7 333 SUPERFAMILY SSF53067 10 330 9.58E-61 T 13-10-2018 BEN78_09465 82357500276b48df7d1bbb9e7792a116 205 SUPERFAMILY SSF63380 1 93 1.28E-24 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BEN78_09465 82357500276b48df7d1bbb9e7792a116 205 Gene3D G3DSA:2.40.30.20 102 199 1.3E-34 T 13-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BEN78_09465 82357500276b48df7d1bbb9e7792a116 205 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 195 8.6E-60 T 13-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BEN78_09465 82357500276b48df7d1bbb9e7792a116 205 Gene3D G3DSA:2.40.30.20 1 89 3.6E-27 T 13-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BEN78_09465 82357500276b48df7d1bbb9e7792a116 205 PIRSF PIRSF000498 1 200 1.7E-74 T 13-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BEN78_09465 82357500276b48df7d1bbb9e7792a116 205 SUPERFAMILY SSF63380 93 195 1.53E-32 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BEN78_09465 82357500276b48df7d1bbb9e7792a116 205 Pfam PF00677 Lumazine binding domain 100 184 7.0E-25 T 13-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BEN78_09465 82357500276b48df7d1bbb9e7792a116 205 Pfam PF00677 Lumazine binding domain 3 87 3.2E-21 T 13-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BEN78_01700 45c1bdcd72ddbfa47373669b56c0bbd9 596 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 284 452 1.0E-23 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 BEN78_01700 45c1bdcd72ddbfa47373669b56c0bbd9 596 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 468 589 4.2E-30 T 13-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain BEN78_01700 45c1bdcd72ddbfa47373669b56c0bbd9 596 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 34 2.4E-8 T 13-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria BEN78_01700 45c1bdcd72ddbfa47373669b56c0bbd9 596 SUPERFAMILY SSF47203 289 466 2.42E-47 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 BEN78_01700 45c1bdcd72ddbfa47373669b56c0bbd9 596 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 164 272 7.2E-17 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 BEN78_01700 45c1bdcd72ddbfa47373669b56c0bbd9 596 Gene3D G3DSA:1.10.540.10 24 160 1.2E-15 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 BEN78_01700 45c1bdcd72ddbfa47373669b56c0bbd9 596 Gene3D G3DSA:1.20.140.10 288 457 9.2E-47 T 13-10-2018 BEN78_01700 45c1bdcd72ddbfa47373669b56c0bbd9 596 SUPERFAMILY SSF56645 36 280 5.37E-56 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 BEN78_01700 45c1bdcd72ddbfa47373669b56c0bbd9 596 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 38 158 2.5E-9 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 BEN78_01700 45c1bdcd72ddbfa47373669b56c0bbd9 596 Gene3D G3DSA:2.40.110.10 162 287 3.5E-27 T 13-10-2018 BEN78_14215 2985d75a908d0b0c7611528c0fd9f5c3 375 SMART SM00271 4 62 1.1E-31 T 13-10-2018 IPR001623 DnaJ domain BEN78_14215 2985d75a908d0b0c7611528c0fd9f5c3 375 Gene3D G3DSA:2.60.260.20 114 245 2.8E-37 T 13-10-2018 BEN78_14215 2985d75a908d0b0c7611528c0fd9f5c3 375 SUPERFAMILY SSF49493 255 340 1.83E-20 T 13-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 BEN78_14215 2985d75a908d0b0c7611528c0fd9f5c3 375 Gene3D G3DSA:2.10.230.10 144 203 2.8E-37 T 13-10-2018 BEN78_14215 2985d75a908d0b0c7611528c0fd9f5c3 375 Pfam PF00226 DnaJ domain 5 67 3.4E-26 T 13-10-2018 IPR001623 DnaJ domain BEN78_14215 2985d75a908d0b0c7611528c0fd9f5c3 375 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 369 39.922 T 13-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 BEN78_14215 2985d75a908d0b0c7611528c0fd9f5c3 375 Pfam PF01556 DnaJ C terminal domain 119 329 5.0E-41 T 13-10-2018 IPR002939 Chaperone DnaJ, C-terminal BEN78_14215 2985d75a908d0b0c7611528c0fd9f5c3 375 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 345 1.3E-128 T 13-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 BEN78_14215 2985d75a908d0b0c7611528c0fd9f5c3 375 Gene3D G3DSA:1.10.287.110 1 113 1.2E-33 T 13-10-2018 IPR036869 Chaperone J-domain superfamily BEN78_14215 2985d75a908d0b0c7611528c0fd9f5c3 375 Pfam PF00684 DnaJ central domain 144 203 7.5E-14 T 13-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 BEN78_14215 2985d75a908d0b0c7611528c0fd9f5c3 375 PRINTS PR00625 DnaJ domain signature 25 40 9.7E-30 T 13-10-2018 IPR001623 DnaJ domain BEN78_14215 2985d75a908d0b0c7611528c0fd9f5c3 375 PRINTS PR00625 DnaJ domain signature 62 81 9.7E-30 T 13-10-2018 IPR001623 DnaJ domain BEN78_14215 2985d75a908d0b0c7611528c0fd9f5c3 375 PRINTS PR00625 DnaJ domain signature 42 62 9.7E-30 T 13-10-2018 IPR001623 DnaJ domain BEN78_14215 2985d75a908d0b0c7611528c0fd9f5c3 375 PRINTS PR00625 DnaJ domain signature 7 25 9.7E-30 T 13-10-2018 IPR001623 DnaJ domain BEN78_14215 2985d75a908d0b0c7611528c0fd9f5c3 375 SUPERFAMILY SSF49493 110 255 1.31E-19 T 13-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 BEN78_14215 2985d75a908d0b0c7611528c0fd9f5c3 375 SUPERFAMILY SSF57938 131 207 9.29E-20 T 13-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily BEN78_14215 2985d75a908d0b0c7611528c0fd9f5c3 375 Gene3D G3DSA:2.60.260.20 250 359 1.2E-27 T 13-10-2018 BEN78_14215 2985d75a908d0b0c7611528c0fd9f5c3 375 SUPERFAMILY SSF46565 1 107 1.57E-34 T 13-10-2018 IPR036869 Chaperone J-domain superfamily BEN78_15640 5026da6c2b01e79b28ac4f6d3a8a0bde 256 Pfam PF01026 TatD related DNase 4 251 5.4E-64 T 13-10-2018 IPR001130 TatD family GO:0016788 BEN78_15640 5026da6c2b01e79b28ac4f6d3a8a0bde 256 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 125 135 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 BEN78_15640 5026da6c2b01e79b28ac4f6d3a8a0bde 256 SUPERFAMILY SSF51556 2 253 4.01E-80 T 13-10-2018 IPR032466 Metal-dependent hydrolase BEN78_15640 5026da6c2b01e79b28ac4f6d3a8a0bde 256 Gene3D G3DSA:3.20.20.140 1 254 3.3E-77 T 13-10-2018 BEN78_15640 5026da6c2b01e79b28ac4f6d3a8a0bde 256 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 BEN78_15640 5026da6c2b01e79b28ac4f6d3a8a0bde 256 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 188 204 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 BEN78_15640 5026da6c2b01e79b28ac4f6d3a8a0bde 256 PIRSF PIRSF005902 1 255 5.4E-65 T 13-10-2018 IPR001130 TatD family GO:0016788 BEN78_08535 ec463b9cbc2c5526d02f1c6686f38bce 855 PIRSF PIRSF000727 24 833 1.7E-275 T 13-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BEN78_08535 ec463b9cbc2c5526d02f1c6686f38bce 855 Gene3D G3DSA:3.30.2130.10 317 475 4.7E-43 T 13-10-2018 BEN78_08535 ec463b9cbc2c5526d02f1c6686f38bce 855 SUPERFAMILY SSF55021 401 489 1.76E-20 T 13-10-2018 BEN78_08535 ec463b9cbc2c5526d02f1c6686f38bce 855 SUPERFAMILY SSF53633 25 312 2.36E-62 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BEN78_08535 ec463b9cbc2c5526d02f1c6686f38bce 855 Gene3D G3DSA:3.40.1160.10 26 310 2.0E-83 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BEN78_08535 ec463b9cbc2c5526d02f1c6686f38bce 855 SUPERFAMILY SSF55021 320 394 2.37E-18 T 13-10-2018 BEN78_08535 ec463b9cbc2c5526d02f1c6686f38bce 855 Gene3D G3DSA:3.30.360.10 641 811 1.9E-118 T 13-10-2018 BEN78_08535 ec463b9cbc2c5526d02f1c6686f38bce 855 Gene3D G3DSA:3.40.50.720 481 829 1.9E-118 T 13-10-2018 BEN78_08535 ec463b9cbc2c5526d02f1c6686f38bce 855 SUPERFAMILY SSF51735 478 648 1.01E-32 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_08535 ec463b9cbc2c5526d02f1c6686f38bce 855 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 26 474 6.2E-98 T 13-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BEN78_08535 ec463b9cbc2c5526d02f1c6686f38bce 855 Gene3D G3DSA:1.20.120.1320 62 156 2.0E-83 T 13-10-2018 BEN78_08535 ec463b9cbc2c5526d02f1c6686f38bce 855 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 676 698 - T 13-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 BEN78_08535 ec463b9cbc2c5526d02f1c6686f38bce 855 Pfam PF00742 Homoserine dehydrogenase 630 826 9.0E-48 T 13-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 BEN78_08535 ec463b9cbc2c5526d02f1c6686f38bce 855 Pfam PF00696 Amino acid kinase family 26 299 2.8E-37 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 BEN78_08535 ec463b9cbc2c5526d02f1c6686f38bce 855 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 487 622 2.8E-19 T 13-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 BEN78_08535 ec463b9cbc2c5526d02f1c6686f38bce 855 Pfam PF13840 ACT domain 329 384 5.3E-7 T 13-10-2018 IPR027795 CASTOR, ACT domain BEN78_08535 ec463b9cbc2c5526d02f1c6686f38bce 855 ProSitePatterns PS00324 Aspartokinase signature. 26 34 - T 13-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BEN78_08535 ec463b9cbc2c5526d02f1c6686f38bce 855 SUPERFAMILY SSF55347 630 813 6.41E-45 T 13-10-2018 BEN78_09005 d9adc4b78fc230c66a21b88e6eb39b2e 398 SUPERFAMILY SSF55874 276 382 4.67E-11 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_09005 d9adc4b78fc230c66a21b88e6eb39b2e 398 Gene3D G3DSA:3.30.565.10 260 382 6.1E-26 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_09005 d9adc4b78fc230c66a21b88e6eb39b2e 398 Pfam PF07730 Histidine kinase 195 261 6.5E-18 T 13-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 BEN78_09005 d9adc4b78fc230c66a21b88e6eb39b2e 398 SMART SM00387 296 384 0.002 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_13395 9e037dcc07f8152bb5a36f3db4733443 425 SMART SM00710 166 187 190.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat BEN78_13395 9e037dcc07f8152bb5a36f3db4733443 425 SMART SM00710 232 254 68.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat BEN78_13395 9e037dcc07f8152bb5a36f3db4733443 425 SMART SM00710 114 135 1000.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat BEN78_13395 9e037dcc07f8152bb5a36f3db4733443 425 SMART SM00710 188 231 6200.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat BEN78_13395 9e037dcc07f8152bb5a36f3db4733443 425 SMART SM00710 277 298 230.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat BEN78_13395 9e037dcc07f8152bb5a36f3db4733443 425 SMART SM00710 84 112 110.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat BEN78_13395 9e037dcc07f8152bb5a36f3db4733443 425 SMART SM00710 300 337 5100.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat BEN78_13395 9e037dcc07f8152bb5a36f3db4733443 425 SMART SM00710 136 165 9.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat BEN78_13395 9e037dcc07f8152bb5a36f3db4733443 425 SMART SM00710 255 276 91.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat BEN78_13395 9e037dcc07f8152bb5a36f3db4733443 425 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 271 314 4.5E-5 T 13-10-2018 IPR022441 Parallel beta-helix repeat-2 Reactome: R-HSA-8951664|Reactome: R-HSA-983168 BEN78_13395 9e037dcc07f8152bb5a36f3db4733443 425 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 249 291 6.4E-7 T 13-10-2018 IPR022441 Parallel beta-helix repeat-2 Reactome: R-HSA-8951664|Reactome: R-HSA-983168 BEN78_13395 9e037dcc07f8152bb5a36f3db4733443 425 Pfam PF05048 Periplasmic copper-binding protein (NosD) 153 367 1.5E-59 T 13-10-2018 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 BEN78_13395 9e037dcc07f8152bb5a36f3db4733443 425 SUPERFAMILY SSF51126 25 390 2.41E-65 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor BEN78_13395 9e037dcc07f8152bb5a36f3db4733443 425 TIGRFAM TIGR04247 NosD_copper_fam: nitrous oxide reductase family maturation protein NosD 31 404 2.3E-131 T 13-10-2018 IPR026464 Nitrous oxide reductase family maturation protein NosD BEN78_13395 9e037dcc07f8152bb5a36f3db4733443 425 SMART SM00722 38 186 6.0E-10 T 13-10-2018 IPR006633 Carbohydrate-binding/sugar hydrolysis domain BEN78_13395 9e037dcc07f8152bb5a36f3db4733443 425 SMART SM00722 192 351 0.0015 T 13-10-2018 IPR006633 Carbohydrate-binding/sugar hydrolysis domain BEN78_13395 9e037dcc07f8152bb5a36f3db4733443 425 Gene3D G3DSA:2.160.20.10 17 179 1.3E-17 T 13-10-2018 IPR012334 Pectin lyase fold BEN78_13395 9e037dcc07f8152bb5a36f3db4733443 425 Gene3D G3DSA:2.160.20.10 180 336 1.4E-23 T 13-10-2018 IPR012334 Pectin lyase fold BEN78_00630 433c794ed0dfd7601a1838cc5c03cdb7 1027 Gene3D G3DSA:3.30.70.1430 553 645 1.4E-256 T 13-10-2018 BEN78_00630 433c794ed0dfd7601a1838cc5c03cdb7 1027 SUPERFAMILY SSF82693 41 135 1.34E-14 T 13-10-2018 BEN78_00630 433c794ed0dfd7601a1838cc5c03cdb7 1027 SUPERFAMILY SSF82866 779 1006 1.31E-49 T 13-10-2018 BEN78_00630 433c794ed0dfd7601a1838cc5c03cdb7 1027 Gene3D G3DSA:3.30.70.1320 135 321 1.4E-256 T 13-10-2018 BEN78_00630 433c794ed0dfd7601a1838cc5c03cdb7 1027 Gene3D G3DSA:3.30.70.1430 40 791 1.4E-256 T 13-10-2018 BEN78_00630 433c794ed0dfd7601a1838cc5c03cdb7 1027 SUPERFAMILY SSF82693 147 305 3.14E-10 T 13-10-2018 BEN78_00630 433c794ed0dfd7601a1838cc5c03cdb7 1027 Gene3D G3DSA:1.20.1640.10 10 497 1.4E-256 T 13-10-2018 BEN78_00630 433c794ed0dfd7601a1838cc5c03cdb7 1027 SUPERFAMILY SSF82866 287 487 9.94E-33 T 13-10-2018 BEN78_00630 433c794ed0dfd7601a1838cc5c03cdb7 1027 Gene3D G3DSA:3.30.2090.10 179 267 1.4E-256 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN78_00630 433c794ed0dfd7601a1838cc5c03cdb7 1027 Gene3D G3DSA:1.20.1640.10 498 999 1.4E-256 T 13-10-2018 BEN78_00630 433c794ed0dfd7601a1838cc5c03cdb7 1027 SUPERFAMILY SSF82714 695 778 1.02E-13 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN78_00630 433c794ed0dfd7601a1838cc5c03cdb7 1027 Gene3D G3DSA:3.30.2090.10 695 783 1.4E-256 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN78_00630 433c794ed0dfd7601a1838cc5c03cdb7 1027 Gene3D G3DSA:3.30.70.1440 646 843 1.4E-256 T 13-10-2018 BEN78_00630 433c794ed0dfd7601a1838cc5c03cdb7 1027 PRINTS PR00702 Acriflavin resistance protein family signature 382 406 4.3E-36 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_00630 433c794ed0dfd7601a1838cc5c03cdb7 1027 PRINTS PR00702 Acriflavin resistance protein family signature 354 375 4.3E-36 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_00630 433c794ed0dfd7601a1838cc5c03cdb7 1027 PRINTS PR00702 Acriflavin resistance protein family signature 327 350 4.3E-36 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_00630 433c794ed0dfd7601a1838cc5c03cdb7 1027 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 4.3E-36 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_00630 433c794ed0dfd7601a1838cc5c03cdb7 1027 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 4.3E-36 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_00630 433c794ed0dfd7601a1838cc5c03cdb7 1027 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 4.3E-36 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_00630 433c794ed0dfd7601a1838cc5c03cdb7 1027 Pfam PF00873 AcrB/AcrD/AcrF family 3 1002 1.8E-189 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_00630 433c794ed0dfd7601a1838cc5c03cdb7 1027 SUPERFAMILY SSF82714 183 261 1.44E-10 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN78_09860 aed05e65e637e9d8a4c7bd2781598824 189 Pfam PF04542 Sigma-70 region 2 18 77 6.8E-8 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BEN78_09860 aed05e65e637e9d8a4c7bd2781598824 189 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 165 1.8E-21 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BEN78_09860 aed05e65e637e9d8a4c7bd2781598824 189 SUPERFAMILY SSF88659 95 167 9.81E-15 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN78_09860 aed05e65e637e9d8a4c7bd2781598824 189 SUPERFAMILY SSF88946 8 93 3.53E-8 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BEN78_09860 aed05e65e637e9d8a4c7bd2781598824 189 Gene3D G3DSA:1.10.10.10 85 168 5.5E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_09860 aed05e65e637e9d8a4c7bd2781598824 189 Gene3D G3DSA:1.10.1740.10 2 74 6.1E-5 T 13-10-2018 BEN78_09860 aed05e65e637e9d8a4c7bd2781598824 189 Pfam PF08281 Sigma-70, region 4 111 160 4.4E-16 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BEN78_08295 f40a5217b5e2763b7546733bc0b15c22 389 TIGRFAM TIGR01789 lycopene_cycl: lycopene cyclase 6 374 3.0E-147 T 13-10-2018 IPR008461 Lycopene cyclase GO:0016117|GO:0045436 BEN78_08295 f40a5217b5e2763b7546733bc0b15c22 389 TIGRFAM TIGR01790 carotene-cycl: lycopene cyclase family protein 6 373 4.8E-97 T 13-10-2018 IPR010108 Lycopene cyclase, beta/epsilon GO:0016117|GO:0016705 BEN78_08295 f40a5217b5e2763b7546733bc0b15c22 389 Gene3D G3DSA:3.50.50.60 1 203 4.2E-8 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_08295 f40a5217b5e2763b7546733bc0b15c22 389 Pfam PF05834 Lycopene cyclase protein 6 373 8.8E-89 T 13-10-2018 BEN78_08295 f40a5217b5e2763b7546733bc0b15c22 389 SUPERFAMILY SSF51905 1 354 2.92E-19 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_15320 117e79e44386303cfdef35c67d1c2cbd 141 Gene3D G3DSA:3.30.70.141 1 141 1.4E-57 T 13-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BEN78_15320 117e79e44386303cfdef35c67d1c2cbd 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 3.3E-41 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BEN78_15320 117e79e44386303cfdef35c67d1c2cbd 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 3.3E-41 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BEN78_15320 117e79e44386303cfdef35c67d1c2cbd 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 3.3E-41 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BEN78_15320 117e79e44386303cfdef35c67d1c2cbd 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 3.3E-41 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BEN78_15320 117e79e44386303cfdef35c67d1c2cbd 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 3.3E-41 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BEN78_15320 117e79e44386303cfdef35c67d1c2cbd 141 Pfam PF00334 Nucleoside diphosphate kinase 4 138 7.9E-56 T 13-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BEN78_15320 117e79e44386303cfdef35c67d1c2cbd 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 13-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN78_15320 117e79e44386303cfdef35c67d1c2cbd 141 SMART SM00562 3 140 2.8E-87 T 13-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BEN78_15320 117e79e44386303cfdef35c67d1c2cbd 141 SUPERFAMILY SSF54919 1 140 2.62E-58 T 13-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BEN78_15320 117e79e44386303cfdef35c67d1c2cbd 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 36.09 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BEN78_09775 d5a3665d05da0c5e5aea6ccc86eb9de4 159 SUPERFAMILY SSF88697 5 156 3.27E-59 T 13-10-2018 IPR015947 PUA-like superfamily BEN78_09775 d5a3665d05da0c5e5aea6ccc86eb9de4 159 Pfam PF01878 EVE domain 6 154 5.4E-54 T 13-10-2018 IPR002740 EVE domain BEN78_09775 d5a3665d05da0c5e5aea6ccc86eb9de4 159 Gene3D G3DSA:3.10.590.10 1 159 2.5E-64 T 13-10-2018 BEN78_00710 7ee32a78778c892aa020ad68eed70c2c 229 Pfam PF03379 CcmB protein 13 226 3.7E-68 T 13-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 BEN78_00710 7ee32a78778c892aa020ad68eed70c2c 229 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 15 225 2.0E-63 T 13-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria BEN78_00710 7ee32a78778c892aa020ad68eed70c2c 229 PIRSF PIRSF002764 5 229 4.5E-76 T 13-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria BEN78_00710 7ee32a78778c892aa020ad68eed70c2c 229 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 110 128 8.5E-54 T 13-10-2018 BEN78_00710 7ee32a78778c892aa020ad68eed70c2c 229 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 165 184 8.5E-54 T 13-10-2018 BEN78_00710 7ee32a78778c892aa020ad68eed70c2c 229 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 202 225 8.5E-54 T 13-10-2018 BEN78_00710 7ee32a78778c892aa020ad68eed70c2c 229 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 85 108 8.5E-54 T 13-10-2018 BEN78_00710 7ee32a78778c892aa020ad68eed70c2c 229 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 62 79 8.5E-54 T 13-10-2018 BEN78_00710 7ee32a78778c892aa020ad68eed70c2c 229 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 36 57 8.5E-54 T 13-10-2018 BEN78_07730 68dfa8392d922693a727d6dc2c141a85 272 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 29 265 9.4E-57 T 13-10-2018 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related BEN78_14225 4dca0e53b309260a7367be49ec231c10 375 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 374 47.504 T 13-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN78_14225 4dca0e53b309260a7367be49ec231c10 375 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 302 313 6.3E-39 T 13-10-2018 BEN78_14225 4dca0e53b309260a7367be49ec231c10 375 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 260 276 6.3E-39 T 13-10-2018 BEN78_14225 4dca0e53b309260a7367be49ec231c10 375 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 229 243 6.3E-39 T 13-10-2018 BEN78_14225 4dca0e53b309260a7367be49ec231c10 375 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 277 294 6.3E-39 T 13-10-2018 BEN78_14225 4dca0e53b309260a7367be49ec231c10 375 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 190 204 6.3E-39 T 13-10-2018 BEN78_14225 4dca0e53b309260a7367be49ec231c10 375 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 371 2.1E-144 T 13-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN78_14225 4dca0e53b309260a7367be49ec231c10 375 Gene3D G3DSA:3.50.30.20 2 150 1.9E-57 T 13-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN78_14225 4dca0e53b309260a7367be49ec231c10 375 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 131 1.4E-50 T 13-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN78_14225 4dca0e53b309260a7367be49ec231c10 375 PRINTS PR00097 Anthranilate synthase component II signature 232 241 5.5E-5 T 13-10-2018 BEN78_14225 4dca0e53b309260a7367be49ec231c10 375 PRINTS PR00097 Anthranilate synthase component II signature 260 271 5.5E-5 T 13-10-2018 BEN78_14225 4dca0e53b309260a7367be49ec231c10 375 PRINTS PR00097 Anthranilate synthase component II signature 345 358 5.5E-5 T 13-10-2018 BEN78_14225 4dca0e53b309260a7367be49ec231c10 375 SUPERFAMILY SSF52317 153 371 9.76E-64 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN78_14225 4dca0e53b309260a7367be49ec231c10 375 SMART SM01097 3 133 1.9E-85 T 13-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN78_14225 4dca0e53b309260a7367be49ec231c10 375 Pfam PF00117 Glutamine amidotransferase class-I 193 368 1.8E-47 T 13-10-2018 IPR017926 Glutamine amidotransferase BEN78_14225 4dca0e53b309260a7367be49ec231c10 375 SUPERFAMILY SSF52021 4 149 3.66E-55 T 13-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN78_14225 4dca0e53b309260a7367be49ec231c10 375 Gene3D G3DSA:3.40.50.880 151 372 1.9E-74 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN78_14225 4dca0e53b309260a7367be49ec231c10 375 PRINTS PR00096 Glutamine amidotransferase superfamily signature 232 241 1.5E-10 T 13-10-2018 BEN78_14225 4dca0e53b309260a7367be49ec231c10 375 PRINTS PR00096 Glutamine amidotransferase superfamily signature 345 358 1.5E-10 T 13-10-2018 BEN78_14225 4dca0e53b309260a7367be49ec231c10 375 PRINTS PR00096 Glutamine amidotransferase superfamily signature 260 271 1.5E-10 T 13-10-2018 BEN78_15920 c31622c81443b5a3fc533c52c304b9fc 235 SMART SM00014 107 216 6.5E-23 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BEN78_15920 c31622c81443b5a3fc533c52c304b9fc 235 Gene3D G3DSA:1.20.144.10 134 224 1.4E-25 T 13-10-2018 BEN78_15920 c31622c81443b5a3fc533c52c304b9fc 235 Pfam PF01569 PAP2 superfamily 110 219 2.0E-21 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BEN78_15920 c31622c81443b5a3fc533c52c304b9fc 235 SUPERFAMILY SSF48317 37 223 1.31E-36 T 13-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily BEN78_16610 467958d99fcebee4a20715dcfde29213 359 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 323 335 - T 13-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 BEN78_16610 467958d99fcebee4a20715dcfde29213 359 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 4 166 5.5E-68 T 13-10-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 BEN78_16610 467958d99fcebee4a20715dcfde29213 359 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 230 243 - T 13-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 BEN78_16610 467958d99fcebee4a20715dcfde29213 359 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 5 149 7.6E-21 T 13-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 BEN78_16610 467958d99fcebee4a20715dcfde29213 359 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 200 341 4.6E-66 T 13-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 BEN78_16610 467958d99fcebee4a20715dcfde29213 359 Pfam PF13242 HAD-hyrolase-like 104 149 3.1E-5 T 13-10-2018 BEN78_16610 467958d99fcebee4a20715dcfde29213 359 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 171 359 38.665 T 13-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 BEN78_16610 467958d99fcebee4a20715dcfde29213 359 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 3 359 50.063 T 13-10-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 BEN78_16610 467958d99fcebee4a20715dcfde29213 359 SUPERFAMILY SSF54211 256 346 1.26E-31 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BEN78_16610 467958d99fcebee4a20715dcfde29213 359 SUPERFAMILY SSF54211 171 255 4.17E-30 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BEN78_16610 467958d99fcebee4a20715dcfde29213 359 Gene3D G3DSA:3.30.230.40 259 359 4.4E-36 T 13-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 BEN78_16610 467958d99fcebee4a20715dcfde29213 359 Gene3D G3DSA:3.40.50.1000 1 153 2.4E-36 T 13-10-2018 IPR023214 HAD superfamily BEN78_16610 467958d99fcebee4a20715dcfde29213 359 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 5 145 8.1E-37 T 13-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 BEN78_16610 467958d99fcebee4a20715dcfde29213 359 SUPERFAMILY SSF56784 2 151 7.62E-35 T 13-10-2018 IPR036412 HAD-like superfamily BEN78_16610 467958d99fcebee4a20715dcfde29213 359 Gene3D G3DSA:3.30.230.40 159 258 2.7E-36 T 13-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 BEN78_15540 29af724379b4ba08d2e60588ad62c8fd 350 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 1 335 50.294 T 13-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 BEN78_15540 29af724379b4ba08d2e60588ad62c8fd 350 Gene3D G3DSA:3.20.20.70 1 335 4.4E-134 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_15540 29af724379b4ba08d2e60588ad62c8fd 350 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 2 336 4.4E-127 T 13-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 BEN78_15540 29af724379b4ba08d2e60588ad62c8fd 350 Pfam PF01180 Dihydroorotate dehydrogenase 44 331 7.0E-90 T 13-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 BEN78_15540 29af724379b4ba08d2e60588ad62c8fd 350 PIRSF PIRSF000164 11 343 1.5E-94 T 13-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 BEN78_15540 29af724379b4ba08d2e60588ad62c8fd 350 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 79 98 - T 13-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 BEN78_15540 29af724379b4ba08d2e60588ad62c8fd 350 SUPERFAMILY SSF51395 2 336 5.13E-102 T 13-10-2018 BEN78_15515 bae93a5a5d85a25fc3b6f5a07bf10754 179 Gene3D G3DSA:1.10.1740.10 13 92 4.0E-18 T 13-10-2018 BEN78_15515 bae93a5a5d85a25fc3b6f5a07bf10754 179 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 179 4.6E-20 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BEN78_15515 bae93a5a5d85a25fc3b6f5a07bf10754 179 SUPERFAMILY SSF88659 124 178 6.11E-7 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN78_15515 bae93a5a5d85a25fc3b6f5a07bf10754 179 Pfam PF04542 Sigma-70 region 2 27 91 6.4E-16 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BEN78_15515 bae93a5a5d85a25fc3b6f5a07bf10754 179 SUPERFAMILY SSF88946 16 110 2.75E-21 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BEN78_15515 bae93a5a5d85a25fc3b6f5a07bf10754 179 Gene3D G3DSA:1.10.10.10 103 179 6.6E-8 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_15515 bae93a5a5d85a25fc3b6f5a07bf10754 179 Pfam PF08281 Sigma-70, region 4 135 174 3.0E-8 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BEN78_05970 ef72faa7d42757d535c7667ca498f210 434 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 324 430 1.9E-20 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_05970 ef72faa7d42757d535c7667ca498f210 434 Pfam PF00512 His Kinase A (phospho-acceptor) domain 231 281 1.4E-6 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_05970 ef72faa7d42757d535c7667ca498f210 434 SUPERFAMILY SSF47384 211 283 2.55E-10 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN78_05970 ef72faa7d42757d535c7667ca498f210 434 SUPERFAMILY SSF55874 282 431 6.55E-34 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_05970 ef72faa7d42757d535c7667ca498f210 434 SMART SM00304 175 227 4.2E-4 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BEN78_05970 ef72faa7d42757d535c7667ca498f210 434 SMART SM00388 228 285 9.0E-8 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_05970 ef72faa7d42757d535c7667ca498f210 434 Gene3D G3DSA:1.10.287.130 172 280 1.1E-14 T 13-10-2018 BEN78_05970 ef72faa7d42757d535c7667ca498f210 434 SMART SM00387 324 433 6.7E-30 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_05970 ef72faa7d42757d535c7667ca498f210 434 Gene3D G3DSA:3.30.565.10 289 433 1.5E-30 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_05970 ef72faa7d42757d535c7667ca498f210 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 411 1.1E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_05970 ef72faa7d42757d535c7667ca498f210 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 430 1.1E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_05970 ef72faa7d42757d535c7667ca498f210 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 1.1E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_14950 352ec48ac374327423c375449c825951 300 Gene3D G3DSA:3.40.190.290 91 295 1.5E-22 T 13-10-2018 BEN78_14950 352ec48ac374327423c375449c825951 300 Gene3D G3DSA:1.10.10.10 1 87 1.8E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_14950 352ec48ac374327423c375449c825951 300 Pfam PF03466 LysR substrate binding domain 90 290 8.9E-29 T 13-10-2018 IPR005119 LysR, substrate-binding BEN78_14950 352ec48ac374327423c375449c825951 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.3E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_14950 352ec48ac374327423c375449c825951 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.3E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_14950 352ec48ac374327423c375449c825951 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.3E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_14950 352ec48ac374327423c375449c825951 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.9E-17 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_14950 352ec48ac374327423c375449c825951 300 SUPERFAMILY SSF46785 1 108 8.16E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_14950 352ec48ac374327423c375449c825951 300 SUPERFAMILY SSF53850 91 294 3.39E-29 T 13-10-2018 BEN78_05890 8ca66292813c9962abec54c748f1cb18 424 Gene3D G3DSA:3.90.1580.10 190 328 8.9E-24 T 13-10-2018 BEN78_05890 8ca66292813c9962abec54c748f1cb18 424 Gene3D G3DSA:3.90.1580.10 329 424 2.7E-11 T 13-10-2018 BEN78_05890 8ca66292813c9962abec54c748f1cb18 424 Pfam PF12867 DinB superfamily 18 149 9.8E-12 T 13-10-2018 IPR024775 DinB-like domain BEN78_05890 8ca66292813c9962abec54c748f1cb18 424 Pfam PF03781 Sulfatase-modifying factor enzyme 1 202 320 3.6E-22 T 13-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 BEN78_05890 8ca66292813c9962abec54c748f1cb18 424 Pfam PF03781 Sulfatase-modifying factor enzyme 1 339 421 1.3E-8 T 13-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 BEN78_05890 8ca66292813c9962abec54c748f1cb18 424 SUPERFAMILY SSF109854 11 146 1.59E-8 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes BEN78_05890 8ca66292813c9962abec54c748f1cb18 424 SUPERFAMILY SSF56436 180 422 1.32E-62 T 13-10-2018 IPR016187 C-type lectin fold BEN78_05890 8ca66292813c9962abec54c748f1cb18 424 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 15 420 3.2E-163 T 13-10-2018 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255 BEN78_13485 33eb9be9c1dc00f5ce55cbde38a882a6 908 SUPERFAMILY SSF56719 30 520 5.49E-180 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 BEN78_13485 33eb9be9c1dc00f5ce55cbde38a882a6 908 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 878 24.12 T 13-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BEN78_13485 33eb9be9c1dc00f5ce55cbde38a882a6 908 SUPERFAMILY SSF101904 532 886 5.36E-105 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal BEN78_13485 33eb9be9c1dc00f5ce55cbde38a882a6 908 SMART SM00434 11 498 2.1E-287 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BEN78_13485 33eb9be9c1dc00f5ce55cbde38a882a6 908 Gene3D G3DSA:1.10.268.10 369 492 2.4E-227 T 13-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 BEN78_13485 33eb9be9c1dc00f5ce55cbde38a882a6 908 Gene3D G3DSA:3.30.1360.40 236 332 2.4E-227 T 13-10-2018 BEN78_13485 33eb9be9c1dc00f5ce55cbde38a882a6 908 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 643 687 1.5E-9 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BEN78_13485 33eb9be9c1dc00f5ce55cbde38a882a6 908 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 636 8.7E-11 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BEN78_13485 33eb9be9c1dc00f5ce55cbde38a882a6 908 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 583 1.0E-9 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BEN78_13485 33eb9be9c1dc00f5ce55cbde38a882a6 908 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 780 826 5.9E-17 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BEN78_13485 33eb9be9c1dc00f5ce55cbde38a882a6 908 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 830 876 7.6E-12 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BEN78_13485 33eb9be9c1dc00f5ce55cbde38a882a6 908 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 737 6.9E-12 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BEN78_13485 33eb9be9c1dc00f5ce55cbde38a882a6 908 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 876 0.0 T 13-10-2018 BEN78_13485 33eb9be9c1dc00f5ce55cbde38a882a6 908 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 1.3E-155 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BEN78_13485 33eb9be9c1dc00f5ce55cbde38a882a6 908 Gene3D G3DSA:3.90.199.10 33 520 2.4E-227 T 13-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 BEN78_13930 8b7bec6db5ac7b34f297d709ecdfb97e 571 SUPERFAMILY SSF56176 8 270 1.54E-66 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BEN78_13930 8b7bec6db5ac7b34f297d709ecdfb97e 571 Gene3D G3DSA:3.30.1370.20 432 516 6.0E-37 T 13-10-2018 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 BEN78_13930 8b7bec6db5ac7b34f297d709ecdfb97e 571 Pfam PF09330 D-lactate dehydrogenase, membrane binding 276 564 1.0E-128 T 13-10-2018 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 BEN78_13930 8b7bec6db5ac7b34f297d709ecdfb97e 571 SUPERFAMILY SSF55103 275 564 7.41E-101 T 13-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 BEN78_13930 8b7bec6db5ac7b34f297d709ecdfb97e 571 PIRSF PIRSF000101 3 566 3.0E-253 T 13-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 BEN78_13930 8b7bec6db5ac7b34f297d709ecdfb97e 571 Gene3D G3DSA:3.30.465.10 104 267 2.8E-71 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 BEN78_13930 8b7bec6db5ac7b34f297d709ecdfb97e 571 Hamap MF_02092 Quinone-dependent D-lactate dehydrogenase [dld]. 8 565 56.136 T 13-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 BEN78_13930 8b7bec6db5ac7b34f297d709ecdfb97e 571 Gene3D G3DSA:3.30.43.10 1 101 4.6E-11 T 13-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 BEN78_13930 8b7bec6db5ac7b34f297d709ecdfb97e 571 Gene3D G3DSA:3.30.70.610 268 338 4.1E-13 T 13-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 BEN78_13930 8b7bec6db5ac7b34f297d709ecdfb97e 571 Gene3D G3DSA:3.30.70.610 364 431 1.0E-13 T 13-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 BEN78_13930 8b7bec6db5ac7b34f297d709ecdfb97e 571 Pfam PF01565 FAD binding domain 45 164 7.1E-7 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 BEN78_06935 48f6a092758e88131b9c58a24b62b389 407 Gene3D G3DSA:1.10.8.350 47 210 2.7E-80 T 13-10-2018 BEN78_06935 48f6a092758e88131b9c58a24b62b389 407 SUPERFAMILY SSF47090 335 403 5.49E-15 T 13-10-2018 IPR036365 PGBD-like superfamily BEN78_06935 48f6a092758e88131b9c58a24b62b389 407 Pfam PF13406 Transglycosylase SLT domain 35 326 3.5E-101 T 13-10-2018 IPR031304 Transglycosylase SLT domain 2 BEN78_06935 48f6a092758e88131b9c58a24b62b389 407 SUPERFAMILY SSF53955 22 332 2.44E-95 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily BEN78_06935 48f6a092758e88131b9c58a24b62b389 407 Gene3D G3DSA:1.10.101.10 337 407 1.4E-10 T 13-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 BEN78_06935 48f6a092758e88131b9c58a24b62b389 407 Gene3D G3DSA:1.10.530.10 77 325 2.7E-80 T 13-10-2018 BEN78_06935 48f6a092758e88131b9c58a24b62b389 407 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 34 329 9.7E-109 T 13-10-2018 IPR011970 Lytic murein transglycosylase BEN78_06935 48f6a092758e88131b9c58a24b62b389 407 Pfam PF01471 Putative peptidoglycan binding domain 347 403 7.3E-10 T 13-10-2018 IPR002477 Peptidoglycan binding-like BEN78_01090 4f3ce1028137c766930619bf660c9042 221 SUPERFAMILY SSF74653 136 216 2.75E-21 T 13-10-2018 BEN78_01090 4f3ce1028137c766930619bf660c9042 221 Gene3D G3DSA:3.30.1150.10 120 219 1.5E-22 T 13-10-2018 BEN78_01090 4f3ce1028137c766930619bf660c9042 221 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 139 218 1.2E-22 T 13-10-2018 IPR037682 TonB, C-terminal GO:0055085 BEN78_01090 4f3ce1028137c766930619bf660c9042 221 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 141 218 2.5E-17 T 13-10-2018 IPR006260 TonB/TolA, C-terminal BEN78_02490 35b3fc6e9e60efe3e6bdc1c48222423b 298 Gene3D G3DSA:3.40.1280.10 141 297 1.8E-39 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BEN78_02490 35b3fc6e9e60efe3e6bdc1c48222423b 298 SMART SM00967 61 136 1.5E-11 T 13-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 BEN78_02490 35b3fc6e9e60efe3e6bdc1c48222423b 298 SUPERFAMILY SSF55315 57 130 3.3E-11 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like BEN78_02490 35b3fc6e9e60efe3e6bdc1c48222423b 298 Pfam PF00588 SpoU rRNA Methylase family 153 290 6.2E-30 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 BEN78_02490 35b3fc6e9e60efe3e6bdc1c48222423b 298 Gene3D G3DSA:3.30.1330.30 49 131 7.2E-9 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like BEN78_02490 35b3fc6e9e60efe3e6bdc1c48222423b 298 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 62 130 2.5E-12 T 13-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 BEN78_02490 35b3fc6e9e60efe3e6bdc1c48222423b 298 SUPERFAMILY SSF75217 147 298 1.18E-34 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases BEN78_10470 43b49d9a56d53d05296f8ff30f95d0d9 576 PRINTS PR00723 Subtilisin serine protease family (S8) signature 399 415 7.2E-17 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN78_10470 43b49d9a56d53d05296f8ff30f95d0d9 576 PRINTS PR00723 Subtilisin serine protease family (S8) signature 170 189 7.2E-17 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN78_10470 43b49d9a56d53d05296f8ff30f95d0d9 576 PRINTS PR00723 Subtilisin serine protease family (S8) signature 226 239 7.2E-17 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN78_10470 43b49d9a56d53d05296f8ff30f95d0d9 576 SUPERFAMILY SSF52743 121 461 1.05E-72 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BEN78_10470 43b49d9a56d53d05296f8ff30f95d0d9 576 SUPERFAMILY SSF89260 477 568 3.66E-5 T 13-10-2018 BEN78_10470 43b49d9a56d53d05296f8ff30f95d0d9 576 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 400 410 - T 13-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site BEN78_10470 43b49d9a56d53d05296f8ff30f95d0d9 576 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 230 240 - T 13-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site BEN78_10470 43b49d9a56d53d05296f8ff30f95d0d9 576 Gene3D G3DSA:3.40.50.200 139 463 8.3E-98 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BEN78_10470 43b49d9a56d53d05296f8ff30f95d0d9 576 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 175 185 - T 13-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site BEN78_10470 43b49d9a56d53d05296f8ff30f95d0d9 576 Gene3D G3DSA:2.60.120.380 475 575 2.0E-40 T 13-10-2018 BEN78_10470 43b49d9a56d53d05296f8ff30f95d0d9 576 Pfam PF00082 Subtilase family 170 450 1.3E-48 T 13-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BEN78_10470 43b49d9a56d53d05296f8ff30f95d0d9 576 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 493 561 5.9E-17 T 13-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial BEN78_12265 87b40ea01cd29ef1fdd9ce429804f07e 275 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 29 275 1.8E-113 T 13-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 BEN78_12265 87b40ea01cd29ef1fdd9ce429804f07e 275 SMART SM00382 53 247 7.6E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_12265 87b40ea01cd29ef1fdd9ce429804f07e 275 SUPERFAMILY SSF52540 27 262 3.17E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_12265 87b40ea01cd29ef1fdd9ce429804f07e 275 Pfam PF00005 ABC transporter 44 200 5.7E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_12265 87b40ea01cd29ef1fdd9ce429804f07e 275 ProSitePatterns PS00211 ABC transporters family signature. 172 186 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN78_12265 87b40ea01cd29ef1fdd9ce429804f07e 275 Gene3D G3DSA:3.40.50.300 28 273 2.7E-68 T 13-10-2018 BEN78_05995 03e8202b7c3a914d957a1abbe4f9621f 687 Gene3D G3DSA:2.40.170.20 167 686 5.7E-67 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_05995 03e8202b7c3a914d957a1abbe4f9621f 687 Pfam PF00593 TonB dependent receptor 217 686 5.4E-42 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_05995 03e8202b7c3a914d957a1abbe4f9621f 687 SUPERFAMILY SSF56935 28 687 1.25E-84 T 13-10-2018 BEN78_05995 03e8202b7c3a914d957a1abbe4f9621f 687 TIGRFAM TIGR01778 TonB-copper: TonB-dependent copper receptor 57 686 1.1E-250 T 13-10-2018 IPR010100 TonB-dependent copper receptor BEN78_05995 03e8202b7c3a914d957a1abbe4f9621f 687 Gene3D G3DSA:2.170.130.10 56 160 9.0E-12 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_05995 03e8202b7c3a914d957a1abbe4f9621f 687 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 153 3.2E-11 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_08925 9da782ea8f450556592f96bc2197bfa6 406 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 50 278 3.7E-78 T 13-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 BEN78_08925 9da782ea8f450556592f96bc2197bfa6 406 SMART SM00936 299 389 5.1E-34 T 13-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BEN78_08925 9da782ea8f450556592f96bc2197bfa6 406 SUPERFAMILY SSF56601 44 299 1.0E-80 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BEN78_08925 9da782ea8f450556592f96bc2197bfa6 406 SUPERFAMILY SSF69189 299 391 9.61E-26 T 13-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BEN78_08925 9da782ea8f450556592f96bc2197bfa6 406 Gene3D G3DSA:2.60.410.10 299 389 2.8E-32 T 13-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BEN78_08925 9da782ea8f450556592f96bc2197bfa6 406 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 299 389 1.9E-24 T 13-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BEN78_08925 9da782ea8f450556592f96bc2197bfa6 406 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 81 92 1.2E-15 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BEN78_08925 9da782ea8f450556592f96bc2197bfa6 406 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 166 179 1.2E-15 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BEN78_08925 9da782ea8f450556592f96bc2197bfa6 406 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 139 156 1.2E-15 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BEN78_08925 9da782ea8f450556592f96bc2197bfa6 406 Gene3D G3DSA:3.40.710.10 38 297 2.5E-86 T 13-10-2018 BEN78_15605 16458dcbca47c3bd31ece5d8a61d1971 756 Gene3D G3DSA:3.40.50.970 422 610 9.9E-54 T 13-10-2018 BEN78_15605 16458dcbca47c3bd31ece5d8a61d1971 756 Pfam PF02780 Transketolase, C-terminal domain 635 735 4.6E-19 T 13-10-2018 IPR033248 Transketolase, C-terminal domain BEN78_15605 16458dcbca47c3bd31ece5d8a61d1971 756 Gene3D G3DSA:3.40.50.970 49 399 9.6E-51 T 13-10-2018 BEN78_15605 16458dcbca47c3bd31ece5d8a61d1971 756 Gene3D G3DSA:3.40.50.920 634 756 1.4E-23 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BEN78_15605 16458dcbca47c3bd31ece5d8a61d1971 756 Pfam PF02779 Transketolase, pyrimidine binding domain 427 596 6.1E-21 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BEN78_15605 16458dcbca47c3bd31ece5d8a61d1971 756 SMART SM00861 421 602 3.4E-30 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BEN78_15605 16458dcbca47c3bd31ece5d8a61d1971 756 SUPERFAMILY SSF52518 59 373 8.7E-48 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold BEN78_15605 16458dcbca47c3bd31ece5d8a61d1971 756 SUPERFAMILY SSF52518 427 607 1.77E-42 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold BEN78_15605 16458dcbca47c3bd31ece5d8a61d1971 756 Pfam PF00676 Dehydrogenase E1 component 64 373 1.6E-21 T 13-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 BEN78_15605 16458dcbca47c3bd31ece5d8a61d1971 756 SUPERFAMILY SSF52922 626 753 2.88E-23 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BEN78_15840 91508405013e156adda922f4fd95caa7 465 PRINTS PR01042 Aspartyl-tRNA synthetase signature 223 236 8.7E-14 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN78_15840 91508405013e156adda922f4fd95caa7 465 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 219 8.7E-14 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN78_15840 91508405013e156adda922f4fd95caa7 465 PRINTS PR01042 Aspartyl-tRNA synthetase signature 380 396 8.7E-14 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN78_15840 91508405013e156adda922f4fd95caa7 465 PRINTS PR01042 Aspartyl-tRNA synthetase signature 420 434 8.7E-14 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN78_15840 91508405013e156adda922f4fd95caa7 465 SUPERFAMILY SSF55681 96 462 2.01E-95 T 13-10-2018 BEN78_15840 91508405013e156adda922f4fd95caa7 465 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 3 465 45.085 T 13-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 BEN78_15840 91508405013e156adda922f4fd95caa7 465 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 9.4E-12 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 BEN78_15840 91508405013e156adda922f4fd95caa7 465 Gene3D G3DSA:2.40.50.140 2 104 3.6E-18 T 13-10-2018 BEN78_15840 91508405013e156adda922f4fd95caa7 465 SUPERFAMILY SSF50249 16 102 3.0E-16 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN78_15840 91508405013e156adda922f4fd95caa7 465 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 458 1.6E-80 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN78_15840 91508405013e156adda922f4fd95caa7 465 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 13 465 2.3E-192 T 13-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 BEN78_15840 91508405013e156adda922f4fd95caa7 465 Gene3D G3DSA:3.30.930.10 108 464 1.1E-106 T 13-10-2018 BEN78_04415 7c5aa65d2ca547a2122dc3b3aa197ccb 319 Gene3D G3DSA:2.40.30.170 76 89 9.2E-11 T 13-10-2018 BEN78_04415 7c5aa65d2ca547a2122dc3b3aa197ccb 319 Gene3D G3DSA:2.40.30.170 163 236 1.2E-20 T 13-10-2018 BEN78_04415 7c5aa65d2ca547a2122dc3b3aa197ccb 319 Gene3D G3DSA:2.40.420.20 237 319 7.4E-18 T 13-10-2018 BEN78_04415 7c5aa65d2ca547a2122dc3b3aa197ccb 319 SUPERFAMILY SSF111369 89 239 3.27E-10 T 13-10-2018 BEN78_04415 7c5aa65d2ca547a2122dc3b3aa197ccb 319 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 125 307 5.8E-32 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BEN78_04415 7c5aa65d2ca547a2122dc3b3aa197ccb 319 Gene3D G3DSA:2.40.50.100 128 162 1.2E-20 T 13-10-2018 BEN78_04415 7c5aa65d2ca547a2122dc3b3aa197ccb 319 Gene3D G3DSA:2.40.50.100 90 123 9.2E-11 T 13-10-2018 BEN78_04415 7c5aa65d2ca547a2122dc3b3aa197ccb 319 Gene3D G3DSA:2.40.420.20 64 75 9.2E-11 T 13-10-2018 BEN78_04415 7c5aa65d2ca547a2122dc3b3aa197ccb 319 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 128 232 1.5E-19 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BEN78_06840 8b2640df69e543c200b19601adfcf988 555 SUPERFAMILY SSF56801 14 553 4.06E-84 T 13-10-2018 BEN78_06840 8b2640df69e543c200b19601adfcf988 555 Pfam PF00501 AMP-binding enzyme 30 452 3.3E-61 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BEN78_06840 8b2640df69e543c200b19601adfcf988 555 ProSitePatterns PS00455 Putative AMP-binding domain signature. 184 195 - T 13-10-2018 IPR020845 AMP-binding, conserved site BEN78_06840 8b2640df69e543c200b19601adfcf988 555 Gene3D G3DSA:3.40.50.12780 2 445 1.0E-78 T 13-10-2018 BEN78_08620 2a947549ca718c38890c6520297a7d19 221 Gene3D G3DSA:1.10.10.10 148 213 1.8E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_08620 2a947549ca718c38890c6520297a7d19 221 SUPERFAMILY SSF52172 2 173 1.35E-26 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_08620 2a947549ca718c38890c6520297a7d19 221 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_08620 2a947549ca718c38890c6520297a7d19 221 SMART SM00448 2 116 1.1E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_08620 2a947549ca718c38890c6520297a7d19 221 SMART SM00421 147 204 7.8E-25 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_08620 2a947549ca718c38890c6520297a7d19 221 Gene3D G3DSA:3.40.50.2300 1 130 5.2E-28 T 13-10-2018 BEN78_08620 2a947549ca718c38890c6520297a7d19 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 2.2E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_08620 2a947549ca718c38890c6520297a7d19 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 2.2E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_08620 2a947549ca718c38890c6520297a7d19 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 2.2E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_08620 2a947549ca718c38890c6520297a7d19 221 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 7.8E-19 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_08620 2a947549ca718c38890c6520297a7d19 221 Pfam PF00072 Response regulator receiver domain 5 116 8.3E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_04025 82ea49fe8b36db43b9554b099f861ffe 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 3.4E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_04025 82ea49fe8b36db43b9554b099f861ffe 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 433 3.4E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_04025 82ea49fe8b36db43b9554b099f861ffe 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 414 3.4E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_04025 82ea49fe8b36db43b9554b099f861ffe 437 Gene3D G3DSA:3.30.450.20 105 227 6.2E-6 T 13-10-2018 BEN78_04025 82ea49fe8b36db43b9554b099f861ffe 437 SUPERFAMILY SSF55874 306 433 1.96E-30 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_04025 82ea49fe8b36db43b9554b099f861ffe 437 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 332 435 1.5E-14 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_04025 82ea49fe8b36db43b9554b099f861ffe 437 SMART SM00387 330 436 8.3E-23 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_04025 82ea49fe8b36db43b9554b099f861ffe 437 SUPERFAMILY SSF55785 108 180 1.01E-5 T 13-10-2018 IPR035965 PAS domain superfamily BEN78_04025 82ea49fe8b36db43b9554b099f861ffe 437 Gene3D G3DSA:3.30.565.10 309 436 7.2E-29 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_04025 82ea49fe8b36db43b9554b099f861ffe 437 SUPERFAMILY SSF47384 223 298 2.16E-7 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN78_04025 82ea49fe8b36db43b9554b099f861ffe 437 Pfam PF00512 His Kinase A (phospho-acceptor) domain 234 295 3.0E-6 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_04025 82ea49fe8b36db43b9554b099f861ffe 437 Gene3D G3DSA:1.10.287.130 237 294 5.6E-6 T 13-10-2018 BEN78_09495 bac03f532c766b1305906175ffc2b1cd 126 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 5 122 4.5E-29 T 13-10-2018 IPR003509 Uncharacterised protein family UPF0102 BEN78_09495 bac03f532c766b1305906175ffc2b1cd 126 Pfam PF02021 Uncharacterised protein family UPF0102 11 105 5.0E-22 T 13-10-2018 IPR003509 Uncharacterised protein family UPF0102 BEN78_09495 bac03f532c766b1305906175ffc2b1cd 126 Gene3D G3DSA:3.40.1350.10 10 126 7.3E-29 T 13-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 BEN78_09495 bac03f532c766b1305906175ffc2b1cd 126 SUPERFAMILY SSF52980 6 111 5.5E-15 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 BEN78_09495 bac03f532c766b1305906175ffc2b1cd 126 Hamap MF_00048 UPF0102 protein YraN [yraN]. 4 119 21.591 T 13-10-2018 IPR003509 Uncharacterised protein family UPF0102 BEN78_09885 aeaa17c24f1e909a4bd3e68ef767bc03 697 Pfam PF00270 DEAD/DEAH box helicase 295 438 1.5E-15 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BEN78_09885 aeaa17c24f1e909a4bd3e68ef767bc03 697 SMART SM00490 509 593 5.9E-20 T 13-10-2018 IPR001650 Helicase, C-terminal BEN78_09885 aeaa17c24f1e909a4bd3e68ef767bc03 697 Gene3D G3DSA:2.40.50.140 50 144 1.6E-7 T 13-10-2018 BEN78_09885 aeaa17c24f1e909a4bd3e68ef767bc03 697 SUPERFAMILY SSF50249 13 178 3.43E-31 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN78_09885 aeaa17c24f1e909a4bd3e68ef767bc03 697 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 32 667 1.0E-213 T 13-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 BEN78_09885 aeaa17c24f1e909a4bd3e68ef767bc03 697 SUPERFAMILY SSF52540 322 604 9.38E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_09885 aeaa17c24f1e909a4bd3e68ef767bc03 697 Gene3D G3DSA:3.40.50.300 462 634 6.5E-52 T 13-10-2018 BEN78_09885 aeaa17c24f1e909a4bd3e68ef767bc03 697 Gene3D G3DSA:3.40.50.300 221 454 9.7E-79 T 13-10-2018 BEN78_09885 aeaa17c24f1e909a4bd3e68ef767bc03 697 Pfam PF00271 Helicase conserved C-terminal domain 485 592 1.9E-16 T 13-10-2018 IPR001650 Helicase, C-terminal BEN78_09885 aeaa17c24f1e909a4bd3e68ef767bc03 697 SMART SM00487 270 464 6.3E-28 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN78_09885 aeaa17c24f1e909a4bd3e68ef767bc03 697 Pfam PF17191 RecG wedge domain 18 175 1.2E-14 T 13-10-2018 IPR033454 RecG, wedge domain BEN78_09735 dd241df5dbceccbd8829cce3423aab0f 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 153 182 - T 13-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site BEN78_09735 dd241df5dbceccbd8829cce3423aab0f 290 Pfam PF00549 CoA-ligase 152 272 1.5E-19 T 13-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BEN78_09735 dd241df5dbceccbd8829cce3423aab0f 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 4.2E-37 T 13-10-2018 BEN78_09735 dd241df5dbceccbd8829cce3423aab0f 290 PRINTS PR01798 Succinyl-CoA synthase signature 178 196 4.2E-37 T 13-10-2018 BEN78_09735 dd241df5dbceccbd8829cce3423aab0f 290 PRINTS PR01798 Succinyl-CoA synthase signature 209 222 4.2E-37 T 13-10-2018 BEN78_09735 dd241df5dbceccbd8829cce3423aab0f 290 PRINTS PR01798 Succinyl-CoA synthase signature 241 258 4.2E-37 T 13-10-2018 BEN78_09735 dd241df5dbceccbd8829cce3423aab0f 290 Gene3D G3DSA:3.40.50.720 2 124 1.2E-53 T 13-10-2018 BEN78_09735 dd241df5dbceccbd8829cce3423aab0f 290 Gene3D G3DSA:3.40.50.261 125 290 2.3E-72 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BEN78_09735 dd241df5dbceccbd8829cce3423aab0f 290 SMART SM00881 4 100 1.8E-38 T 13-10-2018 IPR003781 CoA-binding GO:0048037 BEN78_09735 dd241df5dbceccbd8829cce3423aab0f 290 Pfam PF02629 CoA binding domain 6 99 5.0E-32 T 13-10-2018 IPR003781 CoA-binding GO:0048037 BEN78_09735 dd241df5dbceccbd8829cce3423aab0f 290 SUPERFAMILY SSF52210 124 289 9.03E-56 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BEN78_09735 dd241df5dbceccbd8829cce3423aab0f 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 288 4.8E-139 T 13-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BEN78_09735 dd241df5dbceccbd8829cce3423aab0f 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 289 43.843 T 13-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BEN78_09735 dd241df5dbceccbd8829cce3423aab0f 290 PIRSF PIRSF001553 1 290 1.0E-131 T 13-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BEN78_09735 dd241df5dbceccbd8829cce3423aab0f 290 SUPERFAMILY SSF51735 1 123 4.24E-45 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_09735 dd241df5dbceccbd8829cce3423aab0f 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 237 250 - T 13-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site BEN78_12680 5f00ef007f845eb4d42a2eb15147e718 262 SUPERFAMILY SSF55120 1 255 4.03E-82 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN78_12680 5f00ef007f845eb4d42a2eb15147e718 262 Gene3D G3DSA:3.30.70.580 1 109 4.0E-33 T 13-10-2018 BEN78_12680 5f00ef007f845eb4d42a2eb15147e718 262 Pfam PF01416 tRNA pseudouridine synthase 147 244 7.3E-26 T 13-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN78_12680 5f00ef007f845eb4d42a2eb15147e718 262 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 242 7.8E-59 T 13-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN78_12680 5f00ef007f845eb4d42a2eb15147e718 262 Gene3D G3DSA:3.30.70.660 110 245 2.7E-47 T 13-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 BEN78_12680 5f00ef007f845eb4d42a2eb15147e718 262 PIRSF PIRSF001430 1 258 2.0E-68 T 13-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN78_12680 5f00ef007f845eb4d42a2eb15147e718 262 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 248 31.576 T 13-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN78_09675 b97de0dc74b0ccad8231a15ee76b8a0c 2212 SUPERFAMILY SSF51126 1447 1537 1.1E-6 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor BEN78_09675 b97de0dc74b0ccad8231a15ee76b8a0c 2212 SUPERFAMILY SSF51126 706 1003 2.32E-12 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor BEN78_09675 b97de0dc74b0ccad8231a15ee76b8a0c 2212 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 1776 2212 5.2E-55 T 13-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 BEN78_09675 b97de0dc74b0ccad8231a15ee76b8a0c 2212 SUPERFAMILY SSF103515 1915 2212 2.09E-37 T 13-10-2018 IPR036709 Autotransporter beta-domain superfamily BEN78_09675 b97de0dc74b0ccad8231a15ee76b8a0c 2212 SUPERFAMILY SSF51126 1220 1459 5.34E-6 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor BEN78_09675 b97de0dc74b0ccad8231a15ee76b8a0c 2212 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 899 929 5.4E-10 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09675 b97de0dc74b0ccad8231a15ee76b8a0c 2212 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 967 997 1.4E-9 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09675 b97de0dc74b0ccad8231a15ee76b8a0c 2212 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1102 1133 2.2E-9 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09675 b97de0dc74b0ccad8231a15ee76b8a0c 2212 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1571 1597 1.4E-9 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09675 b97de0dc74b0ccad8231a15ee76b8a0c 2212 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1498 1529 2.6E-10 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09675 b97de0dc74b0ccad8231a15ee76b8a0c 2212 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1635 1665 7.6E-10 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09675 b97de0dc74b0ccad8231a15ee76b8a0c 2212 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1409 1439 4.9E-10 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09675 b97de0dc74b0ccad8231a15ee76b8a0c 2212 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 591 622 6.2E-8 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09675 b97de0dc74b0ccad8231a15ee76b8a0c 2212 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1035 1065 2.6E-9 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09675 b97de0dc74b0ccad8231a15ee76b8a0c 2212 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 524 554 5.0E-10 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09675 b97de0dc74b0ccad8231a15ee76b8a0c 2212 Gene3D G3DSA:2.40.128.130 1895 2212 4.0E-58 T 13-10-2018 IPR036709 Autotransporter beta-domain superfamily BEN78_09675 b97de0dc74b0ccad8231a15ee76b8a0c 2212 SMART SM00869 1937 2196 1.6E-29 T 13-10-2018 IPR005546 Autotransporter beta-domain BEN78_09675 b97de0dc74b0ccad8231a15ee76b8a0c 2212 Pfam PF12951 Passenger-associated-transport-repeat 593 621 7.3E-7 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09675 b97de0dc74b0ccad8231a15ee76b8a0c 2212 Pfam PF12951 Passenger-associated-transport-repeat 1635 1664 4.3E-8 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09675 b97de0dc74b0ccad8231a15ee76b8a0c 2212 Pfam PF12951 Passenger-associated-transport-repeat 968 996 7.6E-8 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09675 b97de0dc74b0ccad8231a15ee76b8a0c 2212 Pfam PF12951 Passenger-associated-transport-repeat 1410 1439 7.1E-9 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09675 b97de0dc74b0ccad8231a15ee76b8a0c 2212 Pfam PF12951 Passenger-associated-transport-repeat 899 928 1.4E-9 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09675 b97de0dc74b0ccad8231a15ee76b8a0c 2212 Pfam PF12951 Passenger-associated-transport-repeat 1036 1064 1.0E-7 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09675 b97de0dc74b0ccad8231a15ee76b8a0c 2212 Pfam PF12951 Passenger-associated-transport-repeat 432 460 0.001 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09675 b97de0dc74b0ccad8231a15ee76b8a0c 2212 Pfam PF12951 Passenger-associated-transport-repeat 1104 1132 4.0E-7 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09675 b97de0dc74b0ccad8231a15ee76b8a0c 2212 Pfam PF12951 Passenger-associated-transport-repeat 526 553 2.1E-8 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09675 b97de0dc74b0ccad8231a15ee76b8a0c 2212 Pfam PF12951 Passenger-associated-transport-repeat 1499 1528 6.3E-10 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09675 b97de0dc74b0ccad8231a15ee76b8a0c 2212 Pfam PF12951 Passenger-associated-transport-repeat 1567 1596 1.8E-8 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09675 b97de0dc74b0ccad8231a15ee76b8a0c 2212 Gene3D G3DSA:2.160.20.20 1726 1894 2.1E-36 T 13-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily BEN78_09675 b97de0dc74b0ccad8231a15ee76b8a0c 2212 SUPERFAMILY SSF51126 559 699 1.54E-10 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor BEN78_09675 b97de0dc74b0ccad8231a15ee76b8a0c 2212 SUPERFAMILY SSF51126 1542 1892 4.71E-44 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor BEN78_09675 b97de0dc74b0ccad8231a15ee76b8a0c 2212 SUPERFAMILY SSF51126 942 1218 6.28E-26 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor BEN78_10710 1f0c8988911f386f68d3d9bb046347cb 186 Gene3D G3DSA:3.40.50.300 4 174 4.2E-50 T 13-10-2018 BEN78_10710 1f0c8988911f386f68d3d9bb046347cb 186 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 26.052 T 13-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 BEN78_10710 1f0c8988911f386f68d3d9bb046347cb 186 PRINTS PR01100 Shikimate kinase family signature 77 86 4.3E-22 T 13-10-2018 BEN78_10710 1f0c8988911f386f68d3d9bb046347cb 186 PRINTS PR01100 Shikimate kinase family signature 59 67 4.3E-22 T 13-10-2018 BEN78_10710 1f0c8988911f386f68d3d9bb046347cb 186 PRINTS PR01100 Shikimate kinase family signature 31 44 4.3E-22 T 13-10-2018 BEN78_10710 1f0c8988911f386f68d3d9bb046347cb 186 PRINTS PR01100 Shikimate kinase family signature 98 115 4.3E-22 T 13-10-2018 BEN78_10710 1f0c8988911f386f68d3d9bb046347cb 186 PRINTS PR01100 Shikimate kinase family signature 7 22 4.3E-22 T 13-10-2018 BEN78_10710 1f0c8988911f386f68d3d9bb046347cb 186 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 13-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 BEN78_10710 1f0c8988911f386f68d3d9bb046347cb 186 Pfam PF01202 Shikimate kinase 13 154 8.1E-45 T 13-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 BEN78_10710 1f0c8988911f386f68d3d9bb046347cb 186 SUPERFAMILY SSF52540 6 164 7.96E-27 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_00605 9f05ca656a6a58bf9830d5cb289bb157 350 Gene3D G3DSA:3.75.10.10 3 349 2.8E-115 T 13-10-2018 BEN78_00605 9f05ca656a6a58bf9830d5cb289bb157 350 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 7 344 1.3E-105 T 13-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 BEN78_00605 9f05ca656a6a58bf9830d5cb289bb157 350 SUPERFAMILY SSF55909 4 345 7.67E-112 T 13-10-2018 BEN78_05825 28bfff2db33922cac5ff4127fdb6214d 109 SUPERFAMILY SSF52833 7 103 9.5E-15 T 13-10-2018 IPR036249 Thioredoxin-like superfamily BEN78_05825 28bfff2db33922cac5ff4127fdb6214d 109 Gene3D G3DSA:3.40.30.10 2 107 7.0E-14 T 13-10-2018 BEN78_05825 28bfff2db33922cac5ff4127fdb6214d 109 Pfam PF00085 Thioredoxin 7 102 4.6E-9 T 13-10-2018 IPR013766 Thioredoxin domain GO:0045454 BEN78_06040 da79d3ca1eb827643efb1183623933d8 299 Pfam PF03466 LysR substrate binding domain 88 293 5.1E-37 T 13-10-2018 IPR005119 LysR, substrate-binding BEN78_06040 da79d3ca1eb827643efb1183623933d8 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.0E-20 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_06040 da79d3ca1eb827643efb1183623933d8 299 Gene3D G3DSA:1.10.10.10 1 85 3.0E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_06040 da79d3ca1eb827643efb1183623933d8 299 SUPERFAMILY SSF46785 3 85 4.25E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_06040 da79d3ca1eb827643efb1183623933d8 299 Gene3D G3DSA:3.40.190.10 91 291 9.6E-54 T 13-10-2018 BEN78_06040 da79d3ca1eb827643efb1183623933d8 299 SUPERFAMILY SSF53850 89 296 2.71E-41 T 13-10-2018 BEN78_06040 da79d3ca1eb827643efb1183623933d8 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.2E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_06040 da79d3ca1eb827643efb1183623933d8 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.2E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_06040 da79d3ca1eb827643efb1183623933d8 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.2E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_06040 da79d3ca1eb827643efb1183623933d8 299 Gene3D G3DSA:3.40.190.10 164 267 9.6E-54 T 13-10-2018 BEN78_13575 e673eb1298cb36603ff581b8089c53b9 401 Gene3D G3DSA:2.60.120.650 11 225 3.1E-78 T 13-10-2018 BEN78_13575 e673eb1298cb36603ff581b8089c53b9 401 SMART SM00558 101 240 0.0015 T 13-10-2018 IPR003347 JmjC domain BEN78_13575 e673eb1298cb36603ff581b8089c53b9 401 SUPERFAMILY SSF51197 17 298 6.87E-63 T 13-10-2018 BEN78_13575 e673eb1298cb36603ff581b8089c53b9 401 Pfam PF08007 Cupin superfamily protein 21 325 1.5E-91 T 13-10-2018 IPR003347 JmjC domain BEN78_13575 e673eb1298cb36603ff581b8089c53b9 401 Gene3D G3DSA:1.10.10.2510 226 398 5.5E-31 T 13-10-2018 BEN78_09575 6387b59a92e0da419a19b26cb0eadce8 278 Pfam PF03799 Cell division protein FtsQ 111 224 3.2E-20 T 13-10-2018 IPR005548 Cell division protein FtsQ/DivIB BEN78_09575 6387b59a92e0da419a19b26cb0eadce8 278 Gene3D G3DSA:3.10.20.310 37 107 4.3E-18 T 13-10-2018 BEN78_09575 6387b59a92e0da419a19b26cb0eadce8 278 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 8 232 21.236 T 13-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 BEN78_09575 6387b59a92e0da419a19b26cb0eadce8 278 Pfam PF08478 POTRA domain, FtsQ-type 47 107 2.1E-13 T 13-10-2018 IPR013685 POTRA domain, FtsQ-type BEN78_09575 6387b59a92e0da419a19b26cb0eadce8 278 Gene3D G3DSA:3.40.50.11690 108 237 1.2E-34 T 13-10-2018 BEN78_12905 2b3da307166d2a9b38cfab4b6c372fe6 382 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 54 85 - T 13-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BEN78_12905 2b3da307166d2a9b38cfab4b6c372fe6 382 Pfam PF04542 Sigma-70 region 2 41 98 6.8E-11 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BEN78_12905 2b3da307166d2a9b38cfab4b6c372fe6 382 SUPERFAMILY SSF88946 18 115 7.06E-20 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BEN78_12905 2b3da307166d2a9b38cfab4b6c372fe6 382 SUPERFAMILY SSF88659 126 186 8.6E-12 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN78_12905 2b3da307166d2a9b38cfab4b6c372fe6 382 Pfam PF08281 Sigma-70, region 4 136 184 1.1E-11 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BEN78_12905 2b3da307166d2a9b38cfab4b6c372fe6 382 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 41 187 9.3E-24 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BEN78_12905 2b3da307166d2a9b38cfab4b6c372fe6 382 Gene3D G3DSA:1.10.10.10 117 190 3.4E-15 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_12905 2b3da307166d2a9b38cfab4b6c372fe6 382 Gene3D G3DSA:1.10.1740.10 10 116 1.4E-19 T 13-10-2018 BEN78_01485 24e848cd68d96eded8c34bf8eaef5b30 209 SUPERFAMILY SSF51735 2 198 5.01E-37 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_01485 24e848cd68d96eded8c34bf8eaef5b30 209 Pfam PF13460 NAD(P)H-binding 7 146 2.0E-7 T 13-10-2018 IPR016040 NAD(P)-binding domain BEN78_01485 24e848cd68d96eded8c34bf8eaef5b30 209 Gene3D G3DSA:3.40.50.720 1 208 3.1E-53 T 13-10-2018 BEN78_04095 7a2bc499b7105c074b322d2477e2c8dd 96 Pfam PF00137 ATP synthase subunit C 17 79 3.3E-8 T 13-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 BEN78_04095 7a2bc499b7105c074b322d2477e2c8dd 96 Hamap MF_01396 ATP synthase subunit c [atpH]. 16 81 13.72 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_04095 7a2bc499b7105c074b322d2477e2c8dd 96 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 26 83 6.2E-23 T 13-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 BEN78_04095 7a2bc499b7105c074b322d2477e2c8dd 96 SUPERFAMILY SSF81333 11 83 1.44E-16 T 13-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily BEN78_04095 7a2bc499b7105c074b322d2477e2c8dd 96 ProSitePatterns PS00605 ATP synthase c subunit signature. 46 67 - T 13-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_04095 7a2bc499b7105c074b322d2477e2c8dd 96 Gene3D G3DSA:1.20.20.10 9 84 2.3E-24 T 13-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_03130 43bfb7ad3beaccc289b50108e2702e83 172 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 36 162 1.0E-20 T 13-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ BEN78_15440 433363c1c8a8685f5304041ddcae62e7 300 Pfam PF01435 Peptidase family M48 75 286 2.1E-38 T 13-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 BEN78_15440 433363c1c8a8685f5304041ddcae62e7 300 Gene3D G3DSA:3.30.2010.10 65 158 1.6E-35 T 13-10-2018 BEN78_15440 433363c1c8a8685f5304041ddcae62e7 300 Hamap MF_00188 Protease HtpX [htpX]. 2 287 24.857 T 13-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 BEN78_11280 b3577e9de1d13896aa8ceea60e9be54b 870 Gene3D G3DSA:1.10.1440.20 568 625 1.1E-7 T 13-10-2018 BEN78_11280 b3577e9de1d13896aa8ceea60e9be54b 870 Gene3D G3DSA:3.30.499.10 366 567 5.5E-75 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 BEN78_11280 b3577e9de1d13896aa8ceea60e9be54b 870 Pfam PF00330 Aconitase family (aconitate hydratase) 70 539 1.9E-145 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN78_11280 b3577e9de1d13896aa8ceea60e9be54b 870 SUPERFAMILY SSF53732 24 593 1.12E-182 T 13-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 BEN78_11280 b3577e9de1d13896aa8ceea60e9be54b 870 Gene3D G3DSA:3.20.19.10 626 864 2.2E-83 T 13-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 BEN78_11280 b3577e9de1d13896aa8ceea60e9be54b 870 SUPERFAMILY SSF52016 604 863 2.35E-67 T 13-10-2018 BEN78_11280 b3577e9de1d13896aa8ceea60e9be54b 870 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 2 865 0.0 T 13-10-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 BEN78_11280 b3577e9de1d13896aa8ceea60e9be54b 870 Gene3D G3DSA:3.30.499.20 14 365 4.5E-125 T 13-10-2018 BEN78_11280 b3577e9de1d13896aa8ceea60e9be54b 870 Pfam PF00694 Aconitase C-terminal domain 663 793 6.0E-29 T 13-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 BEN78_11280 b3577e9de1d13896aa8ceea60e9be54b 870 PRINTS PR00415 Aconitase family signature 162 170 2.4E-28 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN78_11280 b3577e9de1d13896aa8ceea60e9be54b 870 PRINTS PR00415 Aconitase family signature 138 151 2.4E-28 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN78_11280 b3577e9de1d13896aa8ceea60e9be54b 870 PRINTS PR00415 Aconitase family signature 408 419 2.4E-28 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN78_11280 b3577e9de1d13896aa8ceea60e9be54b 870 PRINTS PR00415 Aconitase family signature 272 285 2.4E-28 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN78_11280 b3577e9de1d13896aa8ceea60e9be54b 870 PRINTS PR00415 Aconitase family signature 196 209 2.4E-28 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN78_11280 b3577e9de1d13896aa8ceea60e9be54b 870 PRINTS PR00415 Aconitase family signature 470 483 2.4E-28 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN78_11280 b3577e9de1d13896aa8ceea60e9be54b 870 PRINTS PR00415 Aconitase family signature 365 379 2.4E-28 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN78_11280 b3577e9de1d13896aa8ceea60e9be54b 870 PRINTS PR00415 Aconitase family signature 286 299 2.4E-28 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN78_11280 b3577e9de1d13896aa8ceea60e9be54b 870 PRINTS PR00415 Aconitase family signature 210 225 2.4E-28 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN78_04910 8b86e1c354d5eba94a6cb8b3914a0e29 309 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 9 102 1.0E-37 T 13-10-2018 IPR004480 Monothiol glutaredoxin-related BEN78_04910 8b86e1c354d5eba94a6cb8b3914a0e29 309 SUPERFAMILY SSF52821 202 303 1.14E-22 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily BEN78_04910 8b86e1c354d5eba94a6cb8b3914a0e29 309 SUPERFAMILY SSF89360 114 202 7.46E-8 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 BEN78_04910 8b86e1c354d5eba94a6cb8b3914a0e29 309 Pfam PF00581 Rhodanese-like domain 211 299 8.5E-10 T 13-10-2018 IPR001763 Rhodanese-like domain BEN78_04910 8b86e1c354d5eba94a6cb8b3914a0e29 309 Gene3D G3DSA:3.40.250.10 204 305 1.6E-19 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily BEN78_04910 8b86e1c354d5eba94a6cb8b3914a0e29 309 SMART SM00450 209 304 4.1E-16 T 13-10-2018 IPR001763 Rhodanese-like domain BEN78_04910 8b86e1c354d5eba94a6cb8b3914a0e29 309 Pfam PF00462 Glutaredoxin 21 84 3.3E-17 T 13-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 BEN78_04910 8b86e1c354d5eba94a6cb8b3914a0e29 309 SUPERFAMILY SSF52833 9 103 9.69E-27 T 13-10-2018 IPR036249 Thioredoxin-like superfamily BEN78_04910 8b86e1c354d5eba94a6cb8b3914a0e29 309 Gene3D G3DSA:3.40.30.10 10 103 3.3E-28 T 13-10-2018 BEN78_15435 e39d94688a98f1caca33d30159d1e56c 694 SUPERFAMILY SSF52172 9 145 3.84E-8 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_15435 e39d94688a98f1caca33d30159d1e56c 694 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 143 248 4.6E-9 T 13-10-2018 IPR000014 PAS domain BEN78_15435 e39d94688a98f1caca33d30159d1e56c 694 Pfam PF13426 PAS domain 164 245 7.6E-6 T 13-10-2018 IPR000014 PAS domain BEN78_15435 e39d94688a98f1caca33d30159d1e56c 694 SUPERFAMILY SSF55785 135 254 1.92E-15 T 13-10-2018 IPR035965 PAS domain superfamily BEN78_15435 e39d94688a98f1caca33d30159d1e56c 694 SUPERFAMILY SSF141868 452 685 1.57E-54 T 13-10-2018 IPR035919 EAL domain superfamily BEN78_15435 e39d94688a98f1caca33d30159d1e56c 694 SMART SM00267 265 433 3.8E-15 T 13-10-2018 IPR000160 GGDEF domain BEN78_15435 e39d94688a98f1caca33d30159d1e56c 694 Gene3D G3DSA:3.20.20.450 434 694 3.2E-68 T 13-10-2018 IPR035919 EAL domain superfamily BEN78_15435 e39d94688a98f1caca33d30159d1e56c 694 Pfam PF00563 EAL domain 451 684 3.1E-56 T 13-10-2018 IPR001633 EAL domain BEN78_15435 e39d94688a98f1caca33d30159d1e56c 694 SMART SM00052 444 690 2.1E-43 T 13-10-2018 IPR001633 EAL domain BEN78_15435 e39d94688a98f1caca33d30159d1e56c 694 Gene3D G3DSA:3.30.70.270 263 433 6.7E-34 T 13-10-2018 BEN78_15435 e39d94688a98f1caca33d30159d1e56c 694 Pfam PF00990 Diguanylate cyclase, GGDEF domain 274 427 9.0E-22 T 13-10-2018 IPR000160 GGDEF domain BEN78_15435 e39d94688a98f1caca33d30159d1e56c 694 Gene3D G3DSA:3.40.50.2300 2 144 1.6E-5 T 13-10-2018 BEN78_15435 e39d94688a98f1caca33d30159d1e56c 694 SUPERFAMILY SSF55073 278 435 1.26E-25 T 13-10-2018 IPR029787 Nucleotide cyclase BEN78_15435 e39d94688a98f1caca33d30159d1e56c 694 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 268 432 1.6E-18 T 13-10-2018 IPR000160 GGDEF domain BEN78_15435 e39d94688a98f1caca33d30159d1e56c 694 Gene3D G3DSA:3.30.450.20 145 256 1.0E-12 T 13-10-2018 BEN78_01665 077672a18b31c5da5a3528ab7c391691 91 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 77 7.0E-29 T 13-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 BEN78_01665 077672a18b31c5da5a3528ab7c391691 91 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 26.19 T 13-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 BEN78_01665 077672a18b31c5da5a3528ab7c391691 91 Gene3D G3DSA:1.10.3880.10 1 91 5.8E-33 T 13-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 BEN78_01665 077672a18b31c5da5a3528ab7c391691 91 Pfam PF04362 Bacterial Fe(2+) trafficking 1 87 2.9E-36 T 13-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 BEN78_01665 077672a18b31c5da5a3528ab7c391691 91 SUPERFAMILY SSF111148 1 90 2.49E-34 T 13-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 BEN78_01665 077672a18b31c5da5a3528ab7c391691 91 PIRSF PIRSF029827 1 90 3.1E-37 T 13-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 BEN78_10960 a4d2e2ef9e13c6ba6e87890de6c464c3 291 PIRSF PIRSF010376 9 286 2.1E-82 T 13-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 BEN78_10960 a4d2e2ef9e13c6ba6e87890de6c464c3 291 Gene3D G3DSA:3.30.70.890 168 286 2.4E-23 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily BEN78_10960 a4d2e2ef9e13c6ba6e87890de6c464c3 291 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 12 285 1.6E-68 T 13-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 BEN78_10960 a4d2e2ef9e13c6ba6e87890de6c464c3 291 SUPERFAMILY SSF55060 167 283 3.31E-23 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily BEN78_10960 a4d2e2ef9e13c6ba6e87890de6c464c3 291 Pfam PF08544 GHMP kinases C terminal 212 267 2.3E-4 T 13-10-2018 IPR013750 GHMP kinase, C-terminal domain BEN78_10960 a4d2e2ef9e13c6ba6e87890de6c464c3 291 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 10 275 30.573 T 13-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 BEN78_10960 a4d2e2ef9e13c6ba6e87890de6c464c3 291 Pfam PF00288 GHMP kinases N terminal domain 94 150 7.9E-10 T 13-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 BEN78_10960 a4d2e2ef9e13c6ba6e87890de6c464c3 291 SUPERFAMILY SSF54211 12 164 2.35E-43 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BEN78_10960 a4d2e2ef9e13c6ba6e87890de6c464c3 291 Gene3D G3DSA:3.30.230.10 6 166 7.3E-54 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BEN78_07560 c1a6df3138114772cc9f4e23d5ce3e75 689 Gene3D G3DSA:1.25.40.10 2 310 3.3E-38 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_07560 c1a6df3138114772cc9f4e23d5ce3e75 689 Pfam PF13432 Tetratricopeptide repeat 73 134 3.4E-5 T 13-10-2018 BEN78_07560 c1a6df3138114772cc9f4e23d5ce3e75 689 Pfam PF13432 Tetratricopeptide repeat 244 302 2.7E-5 T 13-10-2018 BEN78_07560 c1a6df3138114772cc9f4e23d5ce3e75 689 Pfam PF13432 Tetratricopeptide repeat 4 65 7.4E-4 T 13-10-2018 BEN78_07560 c1a6df3138114772cc9f4e23d5ce3e75 689 SMART SM00028 168 201 200.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN78_07560 c1a6df3138114772cc9f4e23d5ce3e75 689 SMART SM00028 66 99 25.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN78_07560 c1a6df3138114772cc9f4e23d5ce3e75 689 SMART SM00028 134 167 140.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN78_07560 c1a6df3138114772cc9f4e23d5ce3e75 689 SMART SM00028 100 133 130.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN78_07560 c1a6df3138114772cc9f4e23d5ce3e75 689 SMART SM00028 32 65 450.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN78_07560 c1a6df3138114772cc9f4e23d5ce3e75 689 Pfam PF14559 Tetratricopeptide repeat 147 210 1.3E-6 T 13-10-2018 BEN78_07560 c1a6df3138114772cc9f4e23d5ce3e75 689 SUPERFAMILY SSF48452 29 197 1.9E-21 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_07560 c1a6df3138114772cc9f4e23d5ce3e75 689 SUPERFAMILY SSF48452 165 371 1.05E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_15700 b8369954d0405ba4ed33d8b28a355bce 86 SUPERFAMILY SSF64307 2 70 3.27E-7 T 13-10-2018 IPR036868 TusA-like domain superfamily BEN78_15700 b8369954d0405ba4ed33d8b28a355bce 86 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 5 70 7.0E-15 T 13-10-2018 IPR018720 Domain of unknown function DUF2249 BEN78_12740 524d51370e3d6b4a5e080386ddf3920c 118 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 1 118 20.471 T 13-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 BEN78_12740 524d51370e3d6b4a5e080386ddf3920c 118 Gene3D G3DSA:1.20.58.1610 1 118 4.5E-45 T 13-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12740 524d51370e3d6b4a5e080386ddf3920c 118 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 21 117 1.2E-38 T 13-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_08485 e15d8f143716c6d0e1c2e44648a2bb1d 519 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 7 496 1.5E-193 T 13-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BEN78_08485 e15d8f143716c6d0e1c2e44648a2bb1d 519 SUPERFAMILY SSF110921 403 498 4.05E-21 T 13-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BEN78_08485 e15d8f143716c6d0e1c2e44648a2bb1d 519 Pfam PF08502 LeuA allosteric (dimerisation) domain 372 499 5.5E-29 T 13-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BEN78_08485 e15d8f143716c6d0e1c2e44648a2bb1d 519 Pfam PF00682 HMGL-like 7 274 1.1E-90 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 BEN78_08485 e15d8f143716c6d0e1c2e44648a2bb1d 519 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 14 30 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BEN78_08485 e15d8f143716c6d0e1c2e44648a2bb1d 519 Gene3D G3DSA:1.10.238.260 282 391 2.3E-36 T 13-10-2018 BEN78_08485 e15d8f143716c6d0e1c2e44648a2bb1d 519 Gene3D G3DSA:3.20.20.70 3 278 5.6E-108 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_08485 e15d8f143716c6d0e1c2e44648a2bb1d 519 SMART SM00917 371 499 1.2E-29 T 13-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BEN78_08485 e15d8f143716c6d0e1c2e44648a2bb1d 519 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 4 508 40.017 T 13-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BEN78_08485 e15d8f143716c6d0e1c2e44648a2bb1d 519 Gene3D G3DSA:3.30.160.270 392 500 1.1E-10 T 13-10-2018 BEN78_08485 e15d8f143716c6d0e1c2e44648a2bb1d 519 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 201 214 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BEN78_08485 e15d8f143716c6d0e1c2e44648a2bb1d 519 SUPERFAMILY SSF51569 2 293 6.96E-97 T 13-10-2018 BEN78_10440 e599eada6e3c3980aae6a15067e547d2 301 Pfam PF03466 LysR substrate binding domain 89 291 4.3E-35 T 13-10-2018 IPR005119 LysR, substrate-binding BEN78_10440 e599eada6e3c3980aae6a15067e547d2 301 Gene3D G3DSA:1.10.10.10 3 91 1.3E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_10440 e599eada6e3c3980aae6a15067e547d2 301 SUPERFAMILY SSF46785 2 113 2.34E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_10440 e599eada6e3c3980aae6a15067e547d2 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 6.0E-14 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_10440 e599eada6e3c3980aae6a15067e547d2 301 Gene3D G3DSA:3.40.190.290 92 292 1.1E-37 T 13-10-2018 BEN78_10440 e599eada6e3c3980aae6a15067e547d2 301 SUPERFAMILY SSF53850 90 291 1.54E-35 T 13-10-2018 BEN78_14710 476dd47bfb968916d7e0b91a63bf0b1b 157 ProSitePatterns PS00893 Nudix box signature. 41 62 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BEN78_14710 476dd47bfb968916d7e0b91a63bf0b1b 157 SUPERFAMILY SSF55811 6 149 2.44E-24 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BEN78_14710 476dd47bfb968916d7e0b91a63bf0b1b 157 Pfam PF00293 NUDIX domain 11 131 3.7E-13 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BEN78_14710 476dd47bfb968916d7e0b91a63bf0b1b 157 Gene3D G3DSA:3.90.79.10 4 157 3.4E-36 T 13-10-2018 BEN78_16410 83dce91a8451416640364ab4cc208a04 250 Gene3D G3DSA:3.40.250.10 105 245 3.6E-32 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily BEN78_16410 83dce91a8451416640364ab4cc208a04 250 Gene3D G3DSA:3.30.70.100 1 94 4.3E-28 T 13-10-2018 BEN78_16410 83dce91a8451416640364ab4cc208a04 250 SMART SM00450 114 220 1.5E-12 T 13-10-2018 IPR001763 Rhodanese-like domain BEN78_16410 83dce91a8451416640364ab4cc208a04 250 Pfam PF00581 Rhodanese-like domain 123 214 3.2E-6 T 13-10-2018 IPR001763 Rhodanese-like domain BEN78_16410 83dce91a8451416640364ab4cc208a04 250 SUPERFAMILY SSF52821 104 235 1.08E-24 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily BEN78_15880 db09df1e5b7c3452eb0010ed56f6c83d 180 Hamap MF_00825 3-hydroxyanthranilate 3,4-dioxygenase [nbaC]. 2 168 36.679 T 13-10-2018 IPR010329 3-hydroxyanthranilic acid dioxygenase GO:0000334|GO:0005506|GO:0055114 KEGG: 00380+1.13.11.6|MetaCyc: PWY-5647|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-6505|Reactome: R-HSA-71240 BEN78_15880 db09df1e5b7c3452eb0010ed56f6c83d 180 SUPERFAMILY SSF51182 1 168 4.65E-57 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily BEN78_15880 db09df1e5b7c3452eb0010ed56f6c83d 180 Gene3D G3DSA:2.60.120.10 3 179 3.9E-74 T 13-10-2018 IPR014710 RmlC-like jelly roll fold BEN78_15880 db09df1e5b7c3452eb0010ed56f6c83d 180 Pfam PF06052 3-hydroxyanthranilic acid dioxygenase 4 150 2.3E-69 T 13-10-2018 IPR010329 3-hydroxyanthranilic acid dioxygenase GO:0000334|GO:0005506|GO:0055114 KEGG: 00380+1.13.11.6|MetaCyc: PWY-5647|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-6505|Reactome: R-HSA-71240 BEN78_15880 db09df1e5b7c3452eb0010ed56f6c83d 180 TIGRFAM TIGR03037 anthran_nbaC: 3-hydroxyanthranilate 3,4-dioxygenase 6 163 2.1E-75 T 13-10-2018 IPR010329 3-hydroxyanthranilic acid dioxygenase GO:0000334|GO:0005506|GO:0055114 KEGG: 00380+1.13.11.6|MetaCyc: PWY-5647|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-6505|Reactome: R-HSA-71240 BEN78_03790 ae45da67c9b9b65812e3e851a7d101ab 653 SMART SM00563 472 593 1.3E-28 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BEN78_03790 ae45da67c9b9b65812e3e851a7d101ab 653 Pfam PF07690 Major Facilitator Superfamily 54 389 2.1E-13 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN78_03790 ae45da67c9b9b65812e3e851a7d101ab 653 SUPERFAMILY SSF69593 431 593 5.89E-26 T 13-10-2018 BEN78_03790 ae45da67c9b9b65812e3e851a7d101ab 653 Pfam PF01553 Acyltransferase 466 589 1.7E-24 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BEN78_03790 ae45da67c9b9b65812e3e851a7d101ab 653 SUPERFAMILY SSF103473 13 440 1.06E-21 T 13-10-2018 IPR036259 MFS transporter superfamily BEN78_03790 ae45da67c9b9b65812e3e851a7d101ab 653 Gene3D G3DSA:1.20.1250.20 10 438 8.8E-24 T 13-10-2018 BEN78_03670 4ff30d9ab35a98a1d6be844a8aa5e67c 246 Pfam PF06167 Glucose-regulated metallo-peptidase M90 10 240 2.4E-71 T 13-10-2018 IPR010384 MtfA family BEN78_03670 4ff30d9ab35a98a1d6be844a8aa5e67c 246 Gene3D G3DSA:1.10.472.150 14 138 5.9E-38 T 13-10-2018 BEN78_03670 4ff30d9ab35a98a1d6be844a8aa5e67c 246 Gene3D G3DSA:3.40.390.10 141 246 1.1E-33 T 13-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 BEN78_03670 4ff30d9ab35a98a1d6be844a8aa5e67c 246 SUPERFAMILY SSF55486 35 241 3.66E-30 T 13-10-2018 BEN78_07320 bac21f8c49c442f375ed200e9476f869 276 SUPERFAMILY SSF55620 179 262 8.15E-10 T 13-10-2018 BEN78_07320 bac21f8c49c442f375ed200e9476f869 276 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 276 129.765 T 13-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 BEN78_07320 bac21f8c49c442f375ed200e9476f869 276 Gene3D G3DSA:3.30.1130.10 138 276 1.2E-52 T 13-10-2018 BEN78_07320 bac21f8c49c442f375ed200e9476f869 276 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 20 128 1.3E-43 T 13-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 BEN78_07320 bac21f8c49c442f375ed200e9476f869 276 Pfam PF14489 QueF-like protein 189 262 6.9E-26 T 13-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 BEN78_07320 bac21f8c49c442f375ed200e9476f869 276 Gene3D G3DSA:3.30.1130.10 20 133 2.2E-40 T 13-10-2018 BEN78_07320 bac21f8c49c442f375ed200e9476f869 276 TIGRFAM TIGR03138 QueF: queuine synthase 12 276 5.5E-110 T 13-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 BEN78_07320 bac21f8c49c442f375ed200e9476f869 276 PIRSF PIRSF004750 6 276 1.6E-109 T 13-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 BEN78_14850 c914b24971d0540fe50ba37dc2cd15ac 596 SMART SM00052 317 562 4.5E-89 T 13-10-2018 IPR001633 EAL domain BEN78_14850 c914b24971d0540fe50ba37dc2cd15ac 596 SUPERFAMILY SSF55781 12 144 3.68E-21 T 13-10-2018 BEN78_14850 c914b24971d0540fe50ba37dc2cd15ac 596 Pfam PF00563 EAL domain 324 557 2.0E-68 T 13-10-2018 IPR001633 EAL domain BEN78_14850 c914b24971d0540fe50ba37dc2cd15ac 596 SMART SM00267 135 307 1.4E-5 T 13-10-2018 IPR000160 GGDEF domain BEN78_14850 c914b24971d0540fe50ba37dc2cd15ac 596 SMART SM00065 7 149 3.8E-7 T 13-10-2018 IPR003018 GAF domain GO:0005515 BEN78_14850 c914b24971d0540fe50ba37dc2cd15ac 596 Pfam PF00990 Diguanylate cyclase, GGDEF domain 148 301 2.7E-9 T 13-10-2018 IPR000160 GGDEF domain BEN78_14850 c914b24971d0540fe50ba37dc2cd15ac 596 Gene3D G3DSA:3.20.20.450 321 570 1.1E-84 T 13-10-2018 IPR035919 EAL domain superfamily BEN78_14850 c914b24971d0540fe50ba37dc2cd15ac 596 SUPERFAMILY SSF55073 152 303 1.73E-11 T 13-10-2018 IPR029787 Nucleotide cyclase BEN78_14850 c914b24971d0540fe50ba37dc2cd15ac 596 Pfam PF01590 GAF domain 12 135 1.1E-7 T 13-10-2018 IPR003018 GAF domain GO:0005515 BEN78_14850 c914b24971d0540fe50ba37dc2cd15ac 596 Gene3D G3DSA:3.30.450.40 9 147 1.3E-11 T 13-10-2018 IPR029016 GAF-like domain superfamily BEN78_14850 c914b24971d0540fe50ba37dc2cd15ac 596 Gene3D G3DSA:3.30.70.270 148 320 5.0E-33 T 13-10-2018 BEN78_14850 c914b24971d0540fe50ba37dc2cd15ac 596 SUPERFAMILY SSF141868 324 570 5.49E-76 T 13-10-2018 IPR035919 EAL domain superfamily BEN78_01255 1a8613555a2549ea64dd6b40f2f096f0 124 SUPERFAMILY SSF46785 24 122 8.73E-25 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_01255 1a8613555a2549ea64dd6b40f2f096f0 124 Gene3D G3DSA:1.10.10.10 5 123 2.3E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_01255 1a8613555a2549ea64dd6b40f2f096f0 124 Pfam PF03551 Transcriptional regulator PadR-like family 28 102 1.2E-19 T 13-10-2018 IPR005149 Transcription regulator PadR, N-terminal BEN78_12200 a4b3d9a6a8a804000d13b59a6be6c944 1369 Gene3D G3DSA:3.40.50.150 299 494 1.3E-61 T 13-10-2018 BEN78_12200 a4b3d9a6a8a804000d13b59a6be6c944 1369 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1111 1222 5.1E-25 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_12200 a4b3d9a6a8a804000d13b59a6be6c944 1369 PRINTS PR00996 Glutamate methyltransferase family signature 433 447 1.8E-27 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BEN78_12200 a4b3d9a6a8a804000d13b59a6be6c944 1369 PRINTS PR00996 Glutamate methyltransferase family signature 367 383 1.8E-27 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BEN78_12200 a4b3d9a6a8a804000d13b59a6be6c944 1369 PRINTS PR00996 Glutamate methyltransferase family signature 256 269 1.8E-27 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BEN78_12200 a4b3d9a6a8a804000d13b59a6be6c944 1369 PRINTS PR00996 Glutamate methyltransferase family signature 293 305 1.8E-27 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BEN78_12200 a4b3d9a6a8a804000d13b59a6be6c944 1369 PRINTS PR00996 Glutamate methyltransferase family signature 331 351 1.8E-27 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BEN78_12200 a4b3d9a6a8a804000d13b59a6be6c944 1369 PRINTS PR00996 Glutamate methyltransferase family signature 452 475 1.8E-27 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BEN78_12200 a4b3d9a6a8a804000d13b59a6be6c944 1369 SMART SM00388 997 1065 8.6E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_12200 a4b3d9a6a8a804000d13b59a6be6c944 1369 Pfam PF00512 His Kinase A (phospho-acceptor) domain 998 1065 6.8E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_12200 a4b3d9a6a8a804000d13b59a6be6c944 1369 SUPERFAMILY SSF53335 300 492 1.06E-49 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_12200 a4b3d9a6a8a804000d13b59a6be6c944 1369 Gene3D G3DSA:3.30.450.20 868 974 1.1E-7 T 13-10-2018 BEN78_12200 a4b3d9a6a8a804000d13b59a6be6c944 1369 SMART SM00091 533 598 0.49 T 13-10-2018 IPR000014 PAS domain BEN78_12200 a4b3d9a6a8a804000d13b59a6be6c944 1369 SMART SM00091 866 932 0.002 T 13-10-2018 IPR000014 PAS domain BEN78_12200 a4b3d9a6a8a804000d13b59a6be6c944 1369 SMART SM00091 748 813 14.0 T 13-10-2018 IPR000014 PAS domain BEN78_12200 a4b3d9a6a8a804000d13b59a6be6c944 1369 SUPERFAMILY SSF47757 233 302 5.89E-13 T 13-10-2018 BEN78_12200 a4b3d9a6a8a804000d13b59a6be6c944 1369 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 875 971 1.9E-6 T 13-10-2018 IPR000014 PAS domain BEN78_12200 a4b3d9a6a8a804000d13b59a6be6c944 1369 SMART SM00138 234 493 5.9E-95 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BEN78_12200 a4b3d9a6a8a804000d13b59a6be6c944 1369 SMART SM00448 1245 1358 1.0E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_12200 a4b3d9a6a8a804000d13b59a6be6c944 1369 SUPERFAMILY SSF52172 1243 1367 2.42E-31 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_12200 a4b3d9a6a8a804000d13b59a6be6c944 1369 SUPERFAMILY SSF55874 1054 1225 3.93E-46 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_12200 a4b3d9a6a8a804000d13b59a6be6c944 1369 Gene3D G3DSA:3.30.450.20 734 855 1.5E-9 T 13-10-2018 BEN78_12200 a4b3d9a6a8a804000d13b59a6be6c944 1369 Pfam PF03705 CheR methyltransferase, all-alpha domain 237 286 3.3E-14 T 13-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal BEN78_12200 a4b3d9a6a8a804000d13b59a6be6c944 1369 Pfam PF01339 CheB methylesterase 25 200 1.6E-47 T 13-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 BEN78_12200 a4b3d9a6a8a804000d13b59a6be6c944 1369 SUPERFAMILY SSF55785 735 855 3.24E-7 T 13-10-2018 IPR035965 PAS domain superfamily BEN78_12200 a4b3d9a6a8a804000d13b59a6be6c944 1369 Pfam PF00072 Response regulator receiver domain 1247 1358 3.8E-18 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_12200 a4b3d9a6a8a804000d13b59a6be6c944 1369 Gene3D G3DSA:3.30.565.10 1067 1223 4.8E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_12200 a4b3d9a6a8a804000d13b59a6be6c944 1369 Gene3D G3DSA:3.40.50.2300 1233 1369 1.4E-30 T 13-10-2018 BEN78_12200 a4b3d9a6a8a804000d13b59a6be6c944 1369 Gene3D G3DSA:1.10.287.130 987 1066 1.6E-16 T 13-10-2018 BEN78_12200 a4b3d9a6a8a804000d13b59a6be6c944 1369 SUPERFAMILY SSF47384 990 1066 1.08E-14 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN78_12200 a4b3d9a6a8a804000d13b59a6be6c944 1369 SUPERFAMILY SSF52738 22 206 2.22E-47 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal BEN78_12200 a4b3d9a6a8a804000d13b59a6be6c944 1369 SUPERFAMILY SSF55785 871 971 2.97E-7 T 13-10-2018 IPR035965 PAS domain superfamily BEN78_12200 a4b3d9a6a8a804000d13b59a6be6c944 1369 Pfam PF01739 CheR methyltransferase, SAM binding domain 301 488 3.5E-50 T 13-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal BEN78_12200 a4b3d9a6a8a804000d13b59a6be6c944 1369 SMART SM00387 1111 1224 3.1E-37 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_12200 a4b3d9a6a8a804000d13b59a6be6c944 1369 Gene3D G3DSA:3.40.50.180 15 212 2.5E-57 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal BEN78_12200 a4b3d9a6a8a804000d13b59a6be6c944 1369 Pfam PF13596 PAS domain 750 854 7.2E-24 T 13-10-2018 BEN78_07055 4a5eb0ea77b854e3bcd3379b85b1f067 728 Pfam PF07715 TonB-dependent Receptor Plug Domain 38 149 1.7E-18 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_07055 4a5eb0ea77b854e3bcd3379b85b1f067 728 Pfam PF00593 TonB dependent receptor 244 726 8.0E-36 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_07055 4a5eb0ea77b854e3bcd3379b85b1f067 728 SUPERFAMILY SSF56935 11 728 1.37E-100 T 13-10-2018 BEN78_07055 4a5eb0ea77b854e3bcd3379b85b1f067 728 Gene3D G3DSA:2.40.170.20 30 728 1.1E-119 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_07385 71b079a5d3cf5c8e471769e5f61bf968 279 PRINTS PR00483 Bacterial acid phosphatase class A signature 229 247 2.0E-32 T 13-10-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 BEN78_07385 71b079a5d3cf5c8e471769e5f61bf968 279 PRINTS PR00483 Bacterial acid phosphatase class A signature 73 92 2.0E-32 T 13-10-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 BEN78_07385 71b079a5d3cf5c8e471769e5f61bf968 279 PRINTS PR00483 Bacterial acid phosphatase class A signature 163 189 2.0E-32 T 13-10-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 BEN78_07385 71b079a5d3cf5c8e471769e5f61bf968 279 PRINTS PR00483 Bacterial acid phosphatase class A signature 195 219 2.0E-32 T 13-10-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 BEN78_07385 71b079a5d3cf5c8e471769e5f61bf968 279 PRINTS PR00483 Bacterial acid phosphatase class A signature 137 155 2.0E-32 T 13-10-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 BEN78_07385 71b079a5d3cf5c8e471769e5f61bf968 279 SUPERFAMILY SSF48317 50 248 7.06E-41 T 13-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily BEN78_07385 71b079a5d3cf5c8e471769e5f61bf968 279 Gene3D G3DSA:1.20.144.10 43 259 6.4E-68 T 13-10-2018 BEN78_07385 71b079a5d3cf5c8e471769e5f61bf968 279 Pfam PF01569 PAP2 superfamily 127 229 4.6E-15 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BEN78_07385 71b079a5d3cf5c8e471769e5f61bf968 279 SMART SM00014 118 232 8.6E-16 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BEN78_07385 71b079a5d3cf5c8e471769e5f61bf968 279 PIRSF PIRSF000897 2 268 2.1E-90 T 13-10-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 BEN78_07815 1a690e31221e60de46831d0e3b473216 543 Pfam PF00999 Sodium/hydrogen exchanger family 9 418 1.6E-64 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 BEN78_07815 1a690e31221e60de46831d0e3b473216 543 PRINTS PR01084 Na+/H+ exchanger signature 57 68 2.7E-5 T 13-10-2018 IPR004709 Na+/H+ exchanger GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 Reactome: R-HSA-425986 BEN78_07815 1a690e31221e60de46831d0e3b473216 543 PRINTS PR01084 Na+/H+ exchanger signature 121 131 2.7E-5 T 13-10-2018 IPR004709 Na+/H+ exchanger GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 Reactome: R-HSA-425986 BEN78_07815 1a690e31221e60de46831d0e3b473216 543 PRINTS PR01084 Na+/H+ exchanger signature 71 85 2.7E-5 T 13-10-2018 IPR004709 Na+/H+ exchanger GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 Reactome: R-HSA-425986 BEN78_07815 1a690e31221e60de46831d0e3b473216 543 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 9 541 1.1E-114 T 13-10-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 BEN78_06135 1324449a3e008a01057894196b77a67d 577 SUPERFAMILY SSF47323 451 577 1.05E-29 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN78_06135 1324449a3e008a01057894196b77a67d 577 SUPERFAMILY SSF55190 20 127 1.28E-25 T 13-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 BEN78_06135 1324449a3e008a01057894196b77a67d 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 151 167 1.4E-21 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BEN78_06135 1324449a3e008a01057894196b77a67d 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 175 188 1.4E-21 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BEN78_06135 1324449a3e008a01057894196b77a67d 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 136 151 1.4E-21 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BEN78_06135 1324449a3e008a01057894196b77a67d 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 323 344 1.4E-21 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BEN78_06135 1324449a3e008a01057894196b77a67d 577 SMART SM00836 456 577 3.5E-43 T 13-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 BEN78_06135 1324449a3e008a01057894196b77a67d 577 Gene3D G3DSA:3.40.50.620 138 450 4.1E-147 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_06135 1324449a3e008a01057894196b77a67d 577 SMART SM01016 18 107 1.5E-37 T 13-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BEN78_06135 1324449a3e008a01057894196b77a67d 577 Pfam PF05746 DALR anticodon binding domain 456 577 1.6E-28 T 13-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 BEN78_06135 1324449a3e008a01057894196b77a67d 577 Hamap MF_00123 Arginine--tRNA ligase [argS]. 18 577 24.76 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BEN78_06135 1324449a3e008a01057894196b77a67d 577 Gene3D G3DSA:1.10.730.10 451 577 4.1E-147 T 13-10-2018 BEN78_06135 1324449a3e008a01057894196b77a67d 577 SUPERFAMILY SSF52374 133 467 6.76E-87 T 13-10-2018 BEN78_06135 1324449a3e008a01057894196b77a67d 577 Pfam PF00750 tRNA synthetases class I (R) 125 425 2.1E-21 T 13-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 BEN78_06135 1324449a3e008a01057894196b77a67d 577 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 24 107 3.0E-24 T 13-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BEN78_06135 1324449a3e008a01057894196b77a67d 577 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 44 577 5.9E-116 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BEN78_06135 1324449a3e008a01057894196b77a67d 577 Gene3D G3DSA:3.30.1360.70 16 123 9.9E-25 T 13-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 BEN78_06135 1324449a3e008a01057894196b77a67d 577 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 146 155 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN78_06775 29c0229f461fa1dccf80ec258ea52235 572 SUPERFAMILY SSF55781 297 498 2.36E-40 T 13-10-2018 BEN78_06775 29c0229f461fa1dccf80ec258ea52235 572 Gene3D G3DSA:3.30.450.270 317 495 2.7E-152 T 13-10-2018 BEN78_06775 29c0229f461fa1dccf80ec258ea52235 572 Pfam PF01590 GAF domain 151 286 5.9E-15 T 13-10-2018 IPR003018 GAF domain GO:0005515 BEN78_06775 29c0229f461fa1dccf80ec258ea52235 572 SMART SM00065 145 318 3.2E-10 T 13-10-2018 IPR003018 GAF domain GO:0005515 BEN78_06775 29c0229f461fa1dccf80ec258ea52235 572 Pfam PF00360 Phytochrome region 326 500 1.0E-39 T 13-10-2018 IPR013515 Phytochrome, central region GO:0006355|GO:0009584|GO:0018298 BEN78_06775 29c0229f461fa1dccf80ec258ea52235 572 PRINTS PR01033 Phytochrome signature 463 481 1.3E-22 T 13-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 BEN78_06775 29c0229f461fa1dccf80ec258ea52235 572 PRINTS PR01033 Phytochrome signature 246 267 1.3E-22 T 13-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 BEN78_06775 29c0229f461fa1dccf80ec258ea52235 572 PRINTS PR01033 Phytochrome signature 551 566 1.3E-22 T 13-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 BEN78_06775 29c0229f461fa1dccf80ec258ea52235 572 PRINTS PR01033 Phytochrome signature 344 364 1.3E-22 T 13-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 BEN78_06775 29c0229f461fa1dccf80ec258ea52235 572 PRINTS PR01033 Phytochrome signature 429 448 1.3E-22 T 13-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 BEN78_06775 29c0229f461fa1dccf80ec258ea52235 572 PRINTS PR01033 Phytochrome signature 160 179 1.3E-22 T 13-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 BEN78_06775 29c0229f461fa1dccf80ec258ea52235 572 Gene3D G3DSA:3.30.450.20 17 249 2.7E-152 T 13-10-2018 BEN78_06775 29c0229f461fa1dccf80ec258ea52235 572 Pfam PF08446 PAS fold 12 120 2.6E-13 T 13-10-2018 IPR013654 PAS fold-2 GO:0006355 BEN78_06775 29c0229f461fa1dccf80ec258ea52235 572 Gene3D G3DSA:3.30.450.40 126 476 2.7E-152 T 13-10-2018 IPR029016 GAF-like domain superfamily BEN78_06775 29c0229f461fa1dccf80ec258ea52235 572 SUPERFAMILY SSF55785 7 121 2.62E-26 T 13-10-2018 IPR035965 PAS domain superfamily BEN78_06775 29c0229f461fa1dccf80ec258ea52235 572 SUPERFAMILY SSF55781 134 308 2.94E-54 T 13-10-2018 BEN78_14620 06436604ddf27b804ae3c8df23320d49 261 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site BEN78_14620 06436604ddf27b804ae3c8df23320d49 261 Pfam PF00460 Flagella basal body rod protein 5 35 1.8E-13 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BEN78_14620 06436604ddf27b804ae3c8df23320d49 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 6.8E-114 T 13-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 BEN78_14620 06436604ddf27b804ae3c8df23320d49 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 259 3.3E-25 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BEN78_14620 06436604ddf27b804ae3c8df23320d49 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 1.3E-47 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BEN78_14620 06436604ddf27b804ae3c8df23320d49 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 144 243 1.5E-30 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BEN78_14620 06436604ddf27b804ae3c8df23320d49 261 SUPERFAMILY SSF117143 93 222 3.66E-33 T 13-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like BEN78_14355 fb8158a8042621dd934af65d34539a64 359 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 354 40.955 T 13-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 BEN78_14355 fb8158a8042621dd934af65d34539a64 359 SMART SM00448 4 116 6.5E-17 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_14355 fb8158a8042621dd934af65d34539a64 359 SUPERFAMILY SSF52172 1 108 1.85E-26 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_14355 fb8158a8042621dd934af65d34539a64 359 PIRSF PIRSF000876 1 358 4.5E-135 T 13-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 BEN78_14355 fb8158a8042621dd934af65d34539a64 359 Gene3D G3DSA:3.40.50.180 161 358 2.1E-76 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal BEN78_14355 fb8158a8042621dd934af65d34539a64 359 SUPERFAMILY SSF52738 166 355 6.41E-72 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal BEN78_14355 fb8158a8042621dd934af65d34539a64 359 Pfam PF00072 Response regulator receiver domain 6 108 1.2E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_14355 fb8158a8042621dd934af65d34539a64 359 Pfam PF01339 CheB methylesterase 171 349 2.5E-59 T 13-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 BEN78_14355 fb8158a8042621dd934af65d34539a64 359 Gene3D G3DSA:3.40.50.2300 1 133 8.4E-30 T 13-10-2018 BEN78_06970 5b8a1773b49ed321d903f2e0fc3e1bcb 258 Pfam PF00005 ABC transporter 18 165 1.1E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_06970 5b8a1773b49ed321d903f2e0fc3e1bcb 258 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN78_06970 5b8a1773b49ed321d903f2e0fc3e1bcb 258 SUPERFAMILY SSF52540 5 227 1.81E-60 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_06970 5b8a1773b49ed321d903f2e0fc3e1bcb 258 Gene3D G3DSA:3.40.50.300 7 251 4.0E-62 T 13-10-2018 BEN78_06970 5b8a1773b49ed321d903f2e0fc3e1bcb 258 SMART SM00382 27 223 7.2E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_11915 66c8bda045faa71855e1438a1b41ed17 1141 Gene3D G3DSA:1.20.5.170 779 856 4.1E-15 T 13-10-2018 BEN78_11915 66c8bda045faa71855e1438a1b41ed17 1141 SUPERFAMILY SSF101967 551 745 2.75E-31 T 13-10-2018 BEN78_11915 66c8bda045faa71855e1438a1b41ed17 1141 SUPERFAMILY SSF54523 1003 1139 4.24E-9 T 13-10-2018 BEN78_11915 66c8bda045faa71855e1438a1b41ed17 1141 Gene3D G3DSA:2.150.10.10 495 553 1.3E-9 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_11915 66c8bda045faa71855e1438a1b41ed17 1141 Gene3D G3DSA:2.150.10.10 107 210 1.6E-17 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_11915 66c8bda045faa71855e1438a1b41ed17 1141 Gene3D G3DSA:3.30.1300.30 1035 1140 1.9E-14 T 13-10-2018 BEN78_11915 66c8bda045faa71855e1438a1b41ed17 1141 SUPERFAMILY SSF101967 852 1013 1.31E-27 T 13-10-2018 BEN78_11915 66c8bda045faa71855e1438a1b41ed17 1141 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 6.1E-9 T 13-10-2018 IPR024973 ESPR domain BEN78_11915 66c8bda045faa71855e1438a1b41ed17 1141 Pfam PF05658 Head domain of trimeric autotransporter adhesin 486 508 3.1E-4 T 13-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_11915 66c8bda045faa71855e1438a1b41ed17 1141 Pfam PF05658 Head domain of trimeric autotransporter adhesin 145 167 1.4E-4 T 13-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_11915 66c8bda045faa71855e1438a1b41ed17 1141 SUPERFAMILY SSF101967 83 209 4.71E-17 T 13-10-2018 BEN78_11915 66c8bda045faa71855e1438a1b41ed17 1141 Gene3D G3DSA:2.150.10.10 228 405 1.9E-38 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_11915 66c8bda045faa71855e1438a1b41ed17 1141 Gene3D G3DSA:2.150.10.10 569 755 6.2E-39 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_11915 66c8bda045faa71855e1438a1b41ed17 1141 Gene3D G3DSA:2.150.10.10 857 1024 1.6E-33 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_11915 66c8bda045faa71855e1438a1b41ed17 1141 SUPERFAMILY SSF101967 424 550 4.77E-17 T 13-10-2018 BEN78_11915 66c8bda045faa71855e1438a1b41ed17 1141 SUPERFAMILY SSF101967 211 403 2.35E-31 T 13-10-2018 BEN78_11915 66c8bda045faa71855e1438a1b41ed17 1141 Gene3D G3DSA:2.150.10.10 406 494 4.3E-8 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_11915 66c8bda045faa71855e1438a1b41ed17 1141 Pfam PF03895 YadA-like membrane anchor domain 1091 1139 4.6E-7 T 13-10-2018 IPR005594 YadA-like, C-terminal BEN78_11915 66c8bda045faa71855e1438a1b41ed17 1141 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 723 762 3.8E-12 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_11915 66c8bda045faa71855e1438a1b41ed17 1141 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 381 406 2.4E-10 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_11915 66c8bda045faa71855e1438a1b41ed17 1141 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 992 1029 6.8E-6 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_11915 66c8bda045faa71855e1438a1b41ed17 1141 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 779 814 0.033 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_16360 e367272037c67d90e52ad5bc60ffc1b3 358 Gene3D G3DSA:2.40.37.10 8 351 2.7E-125 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BEN78_16360 e367272037c67d90e52ad5bc60ffc1b3 358 Pfam PF01168 Alanine racemase, N-terminal domain 8 218 4.1E-70 T 13-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN78_16360 e367272037c67d90e52ad5bc60ffc1b3 358 SUPERFAMILY SSF51419 8 233 1.23E-71 T 13-10-2018 IPR029066 PLP-binding barrel BEN78_16360 e367272037c67d90e52ad5bc60ffc1b3 358 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 30 40 - T 13-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN78_16360 e367272037c67d90e52ad5bc60ffc1b3 358 Gene3D G3DSA:3.20.20.10 10 216 2.7E-125 T 13-10-2018 IPR029066 PLP-binding barrel BEN78_16360 e367272037c67d90e52ad5bc60ffc1b3 358 Hamap MF_01201 Alanine racemase. 1 355 33.543 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN78_16360 e367272037c67d90e52ad5bc60ffc1b3 358 SUPERFAMILY SSF50621 228 349 1.57E-40 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BEN78_16360 e367272037c67d90e52ad5bc60ffc1b3 358 PRINTS PR00992 Alanine racemase signature 191 218 2.7E-59 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN78_16360 e367272037c67d90e52ad5bc60ffc1b3 358 PRINTS PR00992 Alanine racemase signature 265 280 2.7E-59 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN78_16360 e367272037c67d90e52ad5bc60ffc1b3 358 PRINTS PR00992 Alanine racemase signature 120 132 2.7E-59 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN78_16360 e367272037c67d90e52ad5bc60ffc1b3 358 PRINTS PR00992 Alanine racemase signature 25 41 2.7E-59 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN78_16360 e367272037c67d90e52ad5bc60ffc1b3 358 PRINTS PR00992 Alanine racemase signature 60 78 2.7E-59 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN78_16360 e367272037c67d90e52ad5bc60ffc1b3 358 PRINTS PR00992 Alanine racemase signature 154 165 2.7E-59 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN78_16360 e367272037c67d90e52ad5bc60ffc1b3 358 PRINTS PR00992 Alanine racemase signature 248 263 2.7E-59 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN78_16360 e367272037c67d90e52ad5bc60ffc1b3 358 PRINTS PR00992 Alanine racemase signature 286 303 2.7E-59 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN78_16360 e367272037c67d90e52ad5bc60ffc1b3 358 SMART SM01005 232 355 1.5E-55 T 13-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN78_16360 e367272037c67d90e52ad5bc60ffc1b3 358 Pfam PF00842 Alanine racemase, C-terminal domain 232 350 4.5E-37 T 13-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN78_16360 e367272037c67d90e52ad5bc60ffc1b3 358 TIGRFAM TIGR00492 alr: alanine racemase 3 349 9.8E-110 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN78_16085 607cabb80601efa2b7bdc683543a03e4 798 Pfam PF00702 haloacid dehalogenase-like hydrolase 508 700 1.1E-28 T 13-10-2018 BEN78_16085 607cabb80601efa2b7bdc683543a03e4 798 SUPERFAMILY SSF81653 317 410 4.84E-25 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 BEN78_16085 607cabb80601efa2b7bdc683543a03e4 798 Gene3D G3DSA:2.70.150.20 303 415 8.3E-29 T 13-10-2018 BEN78_16085 607cabb80601efa2b7bdc683543a03e4 798 SUPERFAMILY SSF81665 258 761 5.1E-12 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 BEN78_16085 607cabb80601efa2b7bdc683543a03e4 798 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 360 374 2.8E-18 T 13-10-2018 BEN78_16085 607cabb80601efa2b7bdc683543a03e4 798 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 709 721 2.8E-18 T 13-10-2018 BEN78_16085 607cabb80601efa2b7bdc683543a03e4 798 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 686 705 2.8E-18 T 13-10-2018 BEN78_16085 607cabb80601efa2b7bdc683543a03e4 798 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 508 522 2.8E-18 T 13-10-2018 BEN78_16085 607cabb80601efa2b7bdc683543a03e4 798 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 633 643 2.8E-18 T 13-10-2018 BEN78_16085 607cabb80601efa2b7bdc683543a03e4 798 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 12 65 6.1E-14 T 13-10-2018 IPR021993 Putative metal-binding domain of cation transport ATPase BEN78_16085 607cabb80601efa2b7bdc683543a03e4 798 Pfam PF00122 E1-E2 ATPase 317 487 7.1E-45 T 13-10-2018 BEN78_16085 607cabb80601efa2b7bdc683543a03e4 798 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 277 789 6.8E-113 T 13-10-2018 BEN78_16085 607cabb80601efa2b7bdc683543a03e4 798 ProSitePatterns PS01229 Hypothetical cof family signature 2. 686 708 - T 13-10-2018 BEN78_16085 607cabb80601efa2b7bdc683543a03e4 798 Gene3D G3DSA:3.40.1110.10 518 618 4.1E-62 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 BEN78_16085 607cabb80601efa2b7bdc683543a03e4 798 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 510 516 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 BEN78_16085 607cabb80601efa2b7bdc683543a03e4 798 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 248 788 5.3E-145 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BEN78_16085 607cabb80601efa2b7bdc683543a03e4 798 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 282 774 4.9E-69 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BEN78_16085 607cabb80601efa2b7bdc683543a03e4 798 Gene3D G3DSA:3.40.50.1000 489 721 4.1E-62 T 13-10-2018 IPR023214 HAD superfamily BEN78_16085 607cabb80601efa2b7bdc683543a03e4 798 SUPERFAMILY SSF55008 92 161 1.96E-15 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 BEN78_16085 607cabb80601efa2b7bdc683543a03e4 798 Gene3D G3DSA:3.30.70.100 93 160 3.8E-11 T 13-10-2018 BEN78_16085 607cabb80601efa2b7bdc683543a03e4 798 Pfam PF00403 Heavy-metal-associated domain 100 156 3.3E-7 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 BEN78_16085 607cabb80601efa2b7bdc683543a03e4 798 SUPERFAMILY SSF56784 508 786 9.52E-48 T 13-10-2018 IPR036412 HAD-like superfamily BEN78_16085 607cabb80601efa2b7bdc683543a03e4 798 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 229 788 3.5E-131 T 13-10-2018 BEN78_02765 c43799b9899b413ccfe5549e89ed18a9 176 Pfam PF02036 SCP-2 sterol transfer family 52 144 8.6E-12 T 13-10-2018 IPR003033 SCP2 sterol-binding domain BEN78_02765 c43799b9899b413ccfe5549e89ed18a9 176 SUPERFAMILY SSF55718 56 149 2.33E-12 T 13-10-2018 IPR036527 SCP2 sterol-binding domain superfamily BEN78_14545 1e1e92358098dd03e3709fb8853e10a3 476 SMART SM00382 159 306 2.7E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_14545 1e1e92358098dd03e3709fb8853e10a3 476 Pfam PF02954 Bacterial regulatory protein, Fis family 429 468 1.7E-12 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BEN78_14545 1e1e92358098dd03e3709fb8853e10a3 476 Gene3D G3DSA:1.10.8.60 311 386 4.1E-24 T 13-10-2018 BEN78_14545 1e1e92358098dd03e3709fb8853e10a3 476 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 451 471 3.8E-12 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BEN78_14545 1e1e92358098dd03e3709fb8853e10a3 476 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 434 451 3.8E-12 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BEN78_14545 1e1e92358098dd03e3709fb8853e10a3 476 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 351 360 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site BEN78_14545 1e1e92358098dd03e3709fb8853e10a3 476 Gene3D G3DSA:3.40.50.300 127 310 1.6E-64 T 13-10-2018 BEN78_14545 1e1e92358098dd03e3709fb8853e10a3 476 Pfam PF06490 Flagellar regulatory protein FleQ 5 120 2.4E-15 T 13-10-2018 IPR010518 Flagellar regulatory FleQ BEN78_14545 1e1e92358098dd03e3709fb8853e10a3 476 SUPERFAMILY SSF52172 3 184 3.31E-6 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_14545 1e1e92358098dd03e3709fb8853e10a3 476 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 225 240 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BEN78_14545 1e1e92358098dd03e3709fb8853e10a3 476 SUPERFAMILY SSF46689 351 470 1.61E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN78_14545 1e1e92358098dd03e3709fb8853e10a3 476 Gene3D G3DSA:1.10.10.60 408 473 3.5E-13 T 13-10-2018 BEN78_14545 1e1e92358098dd03e3709fb8853e10a3 476 Pfam PF00158 Sigma-54 interaction domain 141 306 1.2E-70 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BEN78_14545 1e1e92358098dd03e3709fb8853e10a3 476 SUPERFAMILY SSF52540 141 380 8.49E-72 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_04535 ad0411dc7006cc47b0b9366cde3092ef 602 Pfam PF05227 CHASE3 domain 44 171 3.8E-10 T 13-10-2018 IPR007891 CHASE3 BEN78_04535 ad0411dc7006cc47b0b9366cde3092ef 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 573 586 1.2E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_04535 ad0411dc7006cc47b0b9366cde3092ef 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 516 530 1.2E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_04535 ad0411dc7006cc47b0b9366cde3092ef 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 549 567 1.2E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_04535 ad0411dc7006cc47b0b9366cde3092ef 602 SMART SM00387 476 589 1.2E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_04535 ad0411dc7006cc47b0b9366cde3092ef 602 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 225 341 3.5E-6 T 13-10-2018 IPR000014 PAS domain BEN78_04535 ad0411dc7006cc47b0b9366cde3092ef 602 Gene3D G3DSA:1.20.1440.210 82 169 3.0E-6 T 13-10-2018 BEN78_04535 ad0411dc7006cc47b0b9366cde3092ef 602 SUPERFAMILY SSF55785 208 334 1.44E-11 T 13-10-2018 IPR035965 PAS domain superfamily BEN78_04535 ad0411dc7006cc47b0b9366cde3092ef 602 SMART SM00388 363 431 1.6E-8 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_04535 ad0411dc7006cc47b0b9366cde3092ef 602 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 476 587 8.7E-22 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_04535 ad0411dc7006cc47b0b9366cde3092ef 602 SUPERFAMILY SSF55874 420 587 1.23E-38 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_04535 ad0411dc7006cc47b0b9366cde3092ef 602 Gene3D G3DSA:3.30.450.20 211 331 3.4E-9 T 13-10-2018 BEN78_04535 ad0411dc7006cc47b0b9366cde3092ef 602 Gene3D G3DSA:3.30.565.10 433 592 7.2E-36 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_04535 ad0411dc7006cc47b0b9366cde3092ef 602 Gene3D G3DSA:1.10.287.130 332 429 2.2E-18 T 13-10-2018 BEN78_04535 ad0411dc7006cc47b0b9366cde3092ef 602 Pfam PF00512 His Kinase A (phospho-acceptor) domain 365 429 4.3E-11 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_04535 ad0411dc7006cc47b0b9366cde3092ef 602 SUPERFAMILY SSF47384 347 430 1.08E-17 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN78_04535 ad0411dc7006cc47b0b9366cde3092ef 602 Pfam PF13188 PAS domain 223 281 4.0E-9 T 13-10-2018 IPR000014 PAS domain BEN78_15230 828bc71b887048f34a409a5c237da99b 526 Gene3D G3DSA:3.40.50.620 205 406 1.8E-73 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_15230 828bc71b887048f34a409a5c237da99b 526 Gene3D G3DSA:3.30.300.10 407 526 6.3E-51 T 13-10-2018 BEN78_15230 828bc71b887048f34a409a5c237da99b 526 PRINTS PR00097 Anthranilate synthase component II signature 80 91 1.6E-6 T 13-10-2018 BEN78_15230 828bc71b887048f34a409a5c237da99b 526 PRINTS PR00097 Anthranilate synthase component II signature 173 186 1.6E-6 T 13-10-2018 BEN78_15230 828bc71b887048f34a409a5c237da99b 526 PRINTS PR00097 Anthranilate synthase component II signature 53 62 1.6E-6 T 13-10-2018 BEN78_15230 828bc71b887048f34a409a5c237da99b 526 Pfam PF00117 Glutamine amidotransferase class-I 11 196 8.3E-41 T 13-10-2018 IPR017926 Glutamine amidotransferase BEN78_15230 828bc71b887048f34a409a5c237da99b 526 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 80 96 1.1E-5 T 13-10-2018 BEN78_15230 828bc71b887048f34a409a5c237da99b 526 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 9 23 1.1E-5 T 13-10-2018 BEN78_15230 828bc71b887048f34a409a5c237da99b 526 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 50 64 1.1E-5 T 13-10-2018 BEN78_15230 828bc71b887048f34a409a5c237da99b 526 Pfam PF02540 NAD synthase 214 250 3.2E-7 T 13-10-2018 IPR022310 NAD/GMP synthase BEN78_15230 828bc71b887048f34a409a5c237da99b 526 Pfam PF00958 GMP synthase C terminal domain 434 525 3.3E-43 T 13-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 BEN78_15230 828bc71b887048f34a409a5c237da99b 526 SUPERFAMILY SSF54810 406 526 6.54E-50 T 13-10-2018 BEN78_15230 828bc71b887048f34a409a5c237da99b 526 Gene3D G3DSA:3.40.50.880 8 202 7.2E-57 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN78_15230 828bc71b887048f34a409a5c237da99b 526 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 9 200 8.4E-80 T 13-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 BEN78_15230 828bc71b887048f34a409a5c237da99b 526 SUPERFAMILY SSF52402 193 419 2.3E-55 T 13-10-2018 BEN78_15230 828bc71b887048f34a409a5c237da99b 526 SUPERFAMILY SSF52317 8 204 2.79E-56 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN78_15230 828bc71b887048f34a409a5c237da99b 526 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 6 526 55.526 T 13-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 BEN78_15230 828bc71b887048f34a409a5c237da99b 526 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 208 526 2.0E-148 T 13-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 BEN78_15230 828bc71b887048f34a409a5c237da99b 526 PRINTS PR00096 Glutamine amidotransferase superfamily signature 173 186 1.1E-7 T 13-10-2018 BEN78_15230 828bc71b887048f34a409a5c237da99b 526 PRINTS PR00096 Glutamine amidotransferase superfamily signature 53 62 1.1E-7 T 13-10-2018 BEN78_15230 828bc71b887048f34a409a5c237da99b 526 PRINTS PR00096 Glutamine amidotransferase superfamily signature 80 91 1.1E-7 T 13-10-2018 BEN78_16595 53326cee68cc4188035d2451d73b86af 257 Pfam PF00977 Histidine biosynthesis protein 5 238 2.2E-70 T 13-10-2018 IPR006062 Histidine biosynthesis GO:0000105 BEN78_16595 53326cee68cc4188035d2451d73b86af 257 Gene3D G3DSA:3.20.20.70 1 257 1.7E-89 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_16595 53326cee68cc4188035d2451d73b86af 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 255 7.2E-97 T 13-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 BEN78_16595 53326cee68cc4188035d2451d73b86af 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 255 42.804 T 13-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 BEN78_16595 53326cee68cc4188035d2451d73b86af 257 SUPERFAMILY SSF51366 1 255 8.63E-68 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BEN78_12040 b13f130d0f8fc8e94989772344502fb5 158 Gene3D G3DSA:3.40.30.10 4 157 2.2E-43 T 13-10-2018 BEN78_12040 b13f130d0f8fc8e94989772344502fb5 158 SUPERFAMILY SSF52833 19 156 9.17E-43 T 13-10-2018 IPR036249 Thioredoxin-like superfamily BEN78_12040 b13f130d0f8fc8e94989772344502fb5 158 PIRSF PIRSF000239 9 158 2.5E-23 T 13-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BEN78_12040 b13f130d0f8fc8e94989772344502fb5 158 Pfam PF00578 AhpC/TSA family 18 134 3.0E-30 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BEN78_02640 e22e8e3d8264cd1e56998513ea88a106 464 Gene3D G3DSA:1.10.3860.10 1 447 3.7E-124 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BEN78_02640 e22e8e3d8264cd1e56998513ea88a106 464 Pfam PF00375 Sodium:dicarboxylate symporter family 3 430 1.9E-118 T 13-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BEN78_02640 e22e8e3d8264cd1e56998513ea88a106 464 PRINTS PR00173 Glutamate-aspartate symporter signature 1 21 2.0E-30 T 13-10-2018 BEN78_02640 e22e8e3d8264cd1e56998513ea88a106 464 PRINTS PR00173 Glutamate-aspartate symporter signature 323 349 2.0E-30 T 13-10-2018 BEN78_02640 e22e8e3d8264cd1e56998513ea88a106 464 PRINTS PR00173 Glutamate-aspartate symporter signature 358 377 2.0E-30 T 13-10-2018 BEN78_02640 e22e8e3d8264cd1e56998513ea88a106 464 PRINTS PR00173 Glutamate-aspartate symporter signature 99 124 2.0E-30 T 13-10-2018 BEN78_02640 e22e8e3d8264cd1e56998513ea88a106 464 PRINTS PR00173 Glutamate-aspartate symporter signature 173 195 2.0E-30 T 13-10-2018 BEN78_02640 e22e8e3d8264cd1e56998513ea88a106 464 PRINTS PR00173 Glutamate-aspartate symporter signature 385 405 2.0E-30 T 13-10-2018 BEN78_02640 e22e8e3d8264cd1e56998513ea88a106 464 SUPERFAMILY SSF118215 3 431 1.96E-103 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BEN78_06905 3baad40691876028efb7748e61d447a7 301 SUPERFAMILY SSF56091 40 201 4.03E-33 T 13-10-2018 BEN78_06905 3baad40691876028efb7748e61d447a7 301 SUPERFAMILY SSF50249 176 280 2.97E-29 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN78_06905 3baad40691876028efb7748e61d447a7 301 Pfam PF14743 DNA ligase OB-like domain 215 280 3.7E-29 T 13-10-2018 IPR029319 DNA ligase, OB-like domain BEN78_06905 3baad40691876028efb7748e61d447a7 301 Gene3D G3DSA:3.30.470.30 54 154 2.6E-49 T 13-10-2018 BEN78_06905 3baad40691876028efb7748e61d447a7 301 Gene3D G3DSA:2.40.50.140 215 285 7.8E-9 T 13-10-2018 BEN78_06905 3baad40691876028efb7748e61d447a7 301 Gene3D G3DSA:3.30.1490.70 36 193 2.6E-49 T 13-10-2018 BEN78_00425 41f665ec52a5a853c24217a7a1b3e43b 514 SUPERFAMILY SSF53067 149 321 3.14E-44 T 13-10-2018 BEN78_00425 41f665ec52a5a853c24217a7a1b3e43b 514 PIRSF PIRSF001267 13 514 2.5E-187 T 13-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 BEN78_00425 41f665ec52a5a853c24217a7a1b3e43b 514 Gene3D G3DSA:3.30.420.150 127 307 1.6E-81 T 13-10-2018 BEN78_00425 41f665ec52a5a853c24217a7a1b3e43b 514 SUPERFAMILY SSF53067 23 143 1.07E-31 T 13-10-2018 BEN78_00425 41f665ec52a5a853c24217a7a1b3e43b 514 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 23 318 2.4E-93 T 13-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 BEN78_00425 41f665ec52a5a853c24217a7a1b3e43b 514 Gene3D G3DSA:3.30.420.40 24 314 1.6E-81 T 13-10-2018 BEN78_00425 41f665ec52a5a853c24217a7a1b3e43b 514 SUPERFAMILY SSF109604 325 510 2.25E-49 T 13-10-2018 BEN78_00425 41f665ec52a5a853c24217a7a1b3e43b 514 Gene3D G3DSA:1.10.3210.10 323 514 3.7E-58 T 13-10-2018 BEN78_00425 41f665ec52a5a853c24217a7a1b3e43b 514 Pfam PF02541 Ppx/GppA phosphatase family 37 319 8.3E-69 T 13-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 BEN78_00920 ffa0874fa1e4f3f1607cc16e1bb6ce7f 799 SUPERFAMILY SSF52317 644 794 2.02E-20 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN78_00920 ffa0874fa1e4f3f1607cc16e1bb6ce7f 799 Gene3D G3DSA:2.40.180.10 59 537 7.2E-204 T 13-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 BEN78_00920 ffa0874fa1e4f3f1607cc16e1bb6ce7f 799 PRINTS PR00067 Catalase signature 227 244 2.4E-69 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BEN78_00920 ffa0874fa1e4f3f1607cc16e1bb6ce7f 799 PRINTS PR00067 Catalase signature 143 166 2.4E-69 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BEN78_00920 ffa0874fa1e4f3f1607cc16e1bb6ce7f 799 PRINTS PR00067 Catalase signature 415 442 2.4E-69 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BEN78_00920 ffa0874fa1e4f3f1607cc16e1bb6ce7f 799 PRINTS PR00067 Catalase signature 447 473 2.4E-69 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BEN78_00920 ffa0874fa1e4f3f1607cc16e1bb6ce7f 799 PRINTS PR00067 Catalase signature 206 224 2.4E-69 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BEN78_00920 ffa0874fa1e4f3f1607cc16e1bb6ce7f 799 PRINTS PR00067 Catalase signature 246 264 2.4E-69 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BEN78_00920 ffa0874fa1e4f3f1607cc16e1bb6ce7f 799 PIRSF PIRSF038927 95 797 0.0 T 13-10-2018 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 BEN78_00920 ffa0874fa1e4f3f1607cc16e1bb6ce7f 799 SUPERFAMILY SSF56634 110 621 3.53E-218 T 13-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BEN78_00920 ffa0874fa1e4f3f1607cc16e1bb6ce7f 799 Gene3D G3DSA:3.40.50.880 646 796 4.8E-37 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN78_00920 ffa0874fa1e4f3f1607cc16e1bb6ce7f 799 SMART SM01060 130 518 6.3E-272 T 13-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BEN78_00920 ffa0874fa1e4f3f1607cc16e1bb6ce7f 799 Gene3D G3DSA:1.20.1370.20 541 644 2.8E-33 T 13-10-2018 BEN78_00920 ffa0874fa1e4f3f1607cc16e1bb6ce7f 799 Pfam PF01965 DJ-1/PfpI family 647 757 8.4E-7 T 13-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 BEN78_00920 ffa0874fa1e4f3f1607cc16e1bb6ce7f 799 Pfam PF00199 Catalase 130 514 9.3E-177 T 13-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BEN78_00920 ffa0874fa1e4f3f1607cc16e1bb6ce7f 799 ProSitePatterns PS00438 Catalase proximal active site signature. 166 182 - T 13-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BEN78_00920 ffa0874fa1e4f3f1607cc16e1bb6ce7f 799 Pfam PF06628 Catalase-related immune-responsive 544 607 4.1E-20 T 13-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BEN78_06790 5879f3c9243751d515592c2ebd76b0ee 957 Gene3D G3DSA:3.30.830.10 47 269 7.2E-68 T 13-10-2018 BEN78_06790 5879f3c9243751d515592c2ebd76b0ee 957 SUPERFAMILY SSF63411 50 264 1.23E-52 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BEN78_06790 5879f3c9243751d515592c2ebd76b0ee 957 SUPERFAMILY SSF63411 284 464 7.67E-28 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BEN78_06790 5879f3c9243751d515592c2ebd76b0ee 957 Pfam PF00675 Insulinase (Peptidase family M16) 527 637 2.9E-7 T 13-10-2018 IPR011765 Peptidase M16, N-terminal BEN78_06790 5879f3c9243751d515592c2ebd76b0ee 957 Pfam PF00675 Insulinase (Peptidase family M16) 61 198 3.6E-15 T 13-10-2018 IPR011765 Peptidase M16, N-terminal BEN78_06790 5879f3c9243751d515592c2ebd76b0ee 957 SUPERFAMILY SSF63411 747 940 8.33E-32 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BEN78_06790 5879f3c9243751d515592c2ebd76b0ee 957 Pfam PF05193 Peptidase M16 inactive domain 682 862 1.9E-30 T 13-10-2018 IPR007863 Peptidase M16, C-terminal BEN78_06790 5879f3c9243751d515592c2ebd76b0ee 957 Pfam PF05193 Peptidase M16 inactive domain 219 393 4.9E-28 T 13-10-2018 IPR007863 Peptidase M16, C-terminal BEN78_06790 5879f3c9243751d515592c2ebd76b0ee 957 SUPERFAMILY SSF63411 511 737 1.54E-45 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BEN78_06790 5879f3c9243751d515592c2ebd76b0ee 957 Gene3D G3DSA:3.30.830.10 274 474 1.1E-34 T 13-10-2018 BEN78_06790 5879f3c9243751d515592c2ebd76b0ee 957 Gene3D G3DSA:3.30.830.10 741 934 2.7E-38 T 13-10-2018 BEN78_06790 5879f3c9243751d515592c2ebd76b0ee 957 Gene3D G3DSA:3.30.830.10 517 728 3.8E-47 T 13-10-2018 BEN78_10875 748840d83a8e66148e78cf613b96771d 321 SUPERFAMILY SSF53697 8 318 1.18E-64 T 13-10-2018 BEN78_10875 748840d83a8e66148e78cf613b96771d 321 Pfam PF00571 CBS domain 266 319 9.3E-9 T 13-10-2018 IPR000644 CBS domain BEN78_10875 748840d83a8e66148e78cf613b96771d 321 Pfam PF00571 CBS domain 206 253 6.9E-6 T 13-10-2018 IPR000644 CBS domain BEN78_10875 748840d83a8e66148e78cf613b96771d 321 Gene3D G3DSA:3.40.50.10490 2 191 2.8E-60 T 13-10-2018 BEN78_10875 748840d83a8e66148e78cf613b96771d 321 Pfam PF01380 SIS domain 37 168 1.1E-30 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BEN78_10875 748840d83a8e66148e78cf613b96771d 321 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 41 311 1.2E-112 T 13-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 BEN78_10875 748840d83a8e66148e78cf613b96771d 321 Gene3D G3DSA:3.10.580.10 192 318 6.4E-45 T 13-10-2018 BEN78_10875 748840d83a8e66148e78cf613b96771d 321 SMART SM00116 206 254 3.2E-5 T 13-10-2018 IPR000644 CBS domain BEN78_10875 748840d83a8e66148e78cf613b96771d 321 SMART SM00116 272 320 0.0052 T 13-10-2018 IPR000644 CBS domain BEN78_10875 748840d83a8e66148e78cf613b96771d 321 PIRSF PIRSF004692 1 321 3.7E-131 T 13-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 BEN78_04955 da534bdcc908115a502af2c6d4d05df7 367 Gene3D G3DSA:3.30.1950.10 84 165 8.6E-91 T 13-10-2018 BEN78_04955 da534bdcc908115a502af2c6d4d05df7 367 Pfam PF02563 Polysaccharide biosynthesis/export protein 77 161 7.1E-25 T 13-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 BEN78_04955 da534bdcc908115a502af2c6d4d05df7 367 Pfam PF10531 SLBB domain 248 294 0.0023 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_04955 da534bdcc908115a502af2c6d4d05df7 367 Gene3D G3DSA:3.10.560.10 50 334 8.6E-91 T 13-10-2018 BEN78_04955 da534bdcc908115a502af2c6d4d05df7 367 Gene3D G3DSA:3.10.560.10 62 245 8.6E-91 T 13-10-2018 BEN78_14435 6b8de15287a97cb7475622dbd5c04918 655 SMART SM01231 276 336 8.4E-17 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 BEN78_14435 6b8de15287a97cb7475622dbd5c04918 655 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 440 5.7E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_14435 6b8de15287a97cb7475622dbd5c04918 655 PRINTS PR00344 Bacterial sensor protein C-terminal signature 508 521 5.7E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_14435 6b8de15287a97cb7475622dbd5c04918 655 PRINTS PR00344 Bacterial sensor protein C-terminal signature 484 502 5.7E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_14435 6b8de15287a97cb7475622dbd5c04918 655 SMART SM00260 516 653 1.2E-23 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BEN78_14435 6b8de15287a97cb7475622dbd5c04918 655 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 277 335 4.4E-11 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 BEN78_14435 6b8de15287a97cb7475622dbd5c04918 655 Gene3D G3DSA:2.30.30.40 524 649 4.9E-31 T 13-10-2018 BEN78_14435 6b8de15287a97cb7475622dbd5c04918 655 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 384 523 2.6E-17 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_14435 6b8de15287a97cb7475622dbd5c04918 655 SUPERFAMILY SSF50341 523 652 8.24E-28 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 BEN78_14435 6b8de15287a97cb7475622dbd5c04918 655 SMART SM00073 4 101 2.7E-21 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BEN78_14435 6b8de15287a97cb7475622dbd5c04918 655 Gene3D G3DSA:1.20.120.160 4 136 3.3E-31 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 BEN78_14435 6b8de15287a97cb7475622dbd5c04918 655 Pfam PF01584 CheW-like domain 530 652 2.1E-21 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BEN78_14435 6b8de15287a97cb7475622dbd5c04918 655 SUPERFAMILY SSF47226 4 116 2.22E-29 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 BEN78_14435 6b8de15287a97cb7475622dbd5c04918 655 SMART SM00387 381 524 3.3E-23 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_14435 6b8de15287a97cb7475622dbd5c04918 655 Gene3D G3DSA:2.40.50.180 547 608 4.9E-31 T 13-10-2018 BEN78_14435 6b8de15287a97cb7475622dbd5c04918 655 Pfam PF01627 Hpt domain 8 105 1.3E-16 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BEN78_14435 6b8de15287a97cb7475622dbd5c04918 655 SUPERFAMILY SSF47384 277 337 7.06E-13 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN78_14435 6b8de15287a97cb7475622dbd5c04918 655 Gene3D G3DSA:3.30.565.10 337 523 2.1E-55 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_14435 6b8de15287a97cb7475622dbd5c04918 655 Gene3D G3DSA:1.10.287.560 276 336 1.7E-17 T 13-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 BEN78_14435 6b8de15287a97cb7475622dbd5c04918 655 SUPERFAMILY SSF55874 339 522 3.27E-39 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_05585 5f5c2746994bbd2b97f9af09179779ec 899 Pfam PF01553 Acyltransferase 349 488 1.1E-20 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BEN78_05585 5f5c2746994bbd2b97f9af09179779ec 899 SMART SM00563 364 491 6.4E-27 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BEN78_05585 5f5c2746994bbd2b97f9af09179779ec 899 PIRSF PIRSF500064 54 893 8.7E-300 T 13-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 BEN78_05585 5f5c2746994bbd2b97f9af09179779ec 899 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 69 879 4.7E-295 T 13-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 BEN78_05585 5f5c2746994bbd2b97f9af09179779ec 899 PIRSF PIRSF000437 78 891 1.4E-285 T 13-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 BEN78_05585 5f5c2746994bbd2b97f9af09179779ec 899 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 66 883 28.579 T 13-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 BEN78_05585 5f5c2746994bbd2b97f9af09179779ec 899 SUPERFAMILY SSF69593 323 545 8.63E-26 T 13-10-2018 BEN78_00845 9f70da7956bcfcf64c7232523c086bdb 396 Gene3D G3DSA:3.30.565.10 258 378 3.4E-25 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_00845 9f70da7956bcfcf64c7232523c086bdb 396 Pfam PF07730 Histidine kinase 192 254 9.5E-15 T 13-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 BEN78_00845 9f70da7956bcfcf64c7232523c086bdb 396 SUPERFAMILY SSF55874 272 377 3.16E-15 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_14720 388e1a13ce40651c53f56c3c183a3424 759 SUPERFAMILY SSF81923 1 141 6.28E-53 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 BEN78_14720 388e1a13ce40651c53f56c3c183a3424 759 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 655 735 1.1E-22 T 13-10-2018 IPR019489 Clp ATPase, C-terminal BEN78_14720 388e1a13ce40651c53f56c3c183a3424 759 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 736 0.0 T 13-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 BEN78_14720 388e1a13ce40651c53f56c3c183a3424 759 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 213 311 1.3E-11 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BEN78_14720 388e1a13ce40651c53f56c3c183a3424 759 Gene3D G3DSA:1.10.8.60 655 753 2.3E-29 T 13-10-2018 BEN78_14720 388e1a13ce40651c53f56c3c183a3424 759 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 304 316 - T 13-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 BEN78_14720 388e1a13ce40651c53f56c3c183a3424 759 Gene3D G3DSA:1.10.1780.10 1 142 8.8E-37 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 BEN78_14720 388e1a13ce40651c53f56c3c183a3424 759 SUPERFAMILY SSF52540 439 743 8.94E-76 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_14720 388e1a13ce40651c53f56c3c183a3424 759 SMART SM01086 655 744 5.7E-36 T 13-10-2018 IPR019489 Clp ATPase, C-terminal BEN78_14720 388e1a13ce40651c53f56c3c183a3424 759 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 535 553 3.7E-37 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 BEN78_14720 388e1a13ce40651c53f56c3c183a3424 759 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 564 582 3.7E-37 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 BEN78_14720 388e1a13ce40651c53f56c3c183a3424 759 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 493 511 3.7E-37 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 BEN78_14720 388e1a13ce40651c53f56c3c183a3424 759 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 597 611 3.7E-37 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 BEN78_14720 388e1a13ce40651c53f56c3c183a3424 759 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 1.5E-12 T 13-10-2018 IPR004176 Clp, N-terminal BEN78_14720 388e1a13ce40651c53f56c3c183a3424 759 Gene3D G3DSA:1.10.8.60 353 440 5.7E-30 T 13-10-2018 BEN78_14720 388e1a13ce40651c53f56c3c183a3424 759 Gene3D G3DSA:3.40.50.300 441 654 1.2E-75 T 13-10-2018 BEN78_14720 388e1a13ce40651c53f56c3c183a3424 759 Gene3D G3DSA:3.40.50.300 162 352 1.9E-63 T 13-10-2018 BEN78_14720 388e1a13ce40651c53f56c3c183a3424 759 SMART SM00382 489 657 1.3E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_14720 388e1a13ce40651c53f56c3c183a3424 759 SMART SM00382 208 353 1.4E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_14720 388e1a13ce40651c53f56c3c183a3424 759 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 520 538 - T 13-10-2018 IPR028299 ClpA/B, conserved site 2 BEN78_14720 388e1a13ce40651c53f56c3c183a3424 759 Pfam PF07724 AAA domain (Cdc48 subfamily) 488 649 1.8E-45 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BEN78_14720 388e1a13ce40651c53f56c3c183a3424 759 SUPERFAMILY SSF52540 170 428 1.45E-65 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_06655 605316f05a142840bbf4b5808bb9e8d9 488 SUPERFAMILY SSF56954 2 473 3.27E-97 T 13-10-2018 BEN78_06655 605316f05a142840bbf4b5808bb9e8d9 488 Gene3D G3DSA:1.20.1600.10 58 471 2.5E-128 T 13-10-2018 BEN78_06655 605316f05a142840bbf4b5808bb9e8d9 488 Gene3D G3DSA:2.20.200.10 104 359 2.5E-128 T 13-10-2018 BEN78_06655 605316f05a142840bbf4b5808bb9e8d9 488 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 10 470 1.0E-98 T 13-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 BEN78_06655 605316f05a142840bbf4b5808bb9e8d9 488 Pfam PF02321 Outer membrane efflux protein 69 258 3.1E-23 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BEN78_06655 605316f05a142840bbf4b5808bb9e8d9 488 Pfam PF02321 Outer membrane efflux protein 293 467 9.9E-21 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BEN78_01640 51f7402e26ae756f4bd7f081da3d4630 164 Gene3D G3DSA:3.40.50.620 3 164 4.0E-55 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_01640 51f7402e26ae756f4bd7f081da3d4630 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 54 78 1.1E-49 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 BEN78_01640 51f7402e26ae756f4bd7f081da3d4630 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 25 46 1.1E-49 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 BEN78_01640 51f7402e26ae756f4bd7f081da3d4630 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 117 139 1.1E-49 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 BEN78_01640 51f7402e26ae756f4bd7f081da3d4630 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 7 25 1.1E-49 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 BEN78_01640 51f7402e26ae756f4bd7f081da3d4630 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 90 106 1.1E-49 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 BEN78_01640 51f7402e26ae756f4bd7f081da3d4630 164 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 8 67 1.0E-16 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BEN78_01640 51f7402e26ae756f4bd7f081da3d4630 164 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 7 163 35.182 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 BEN78_01640 51f7402e26ae756f4bd7f081da3d4630 164 Pfam PF01467 Cytidylyltransferase-like 10 138 7.8E-22 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BEN78_01640 51f7402e26ae756f4bd7f081da3d4630 164 SUPERFAMILY SSF52374 6 161 1.02E-44 T 13-10-2018 BEN78_01640 51f7402e26ae756f4bd7f081da3d4630 164 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 8 160 5.1E-55 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 BEN78_01660 1347778352bfee47684b0eb1d02098a6 357 Pfam PF14815 NUDIX domain 233 348 9.2E-23 T 13-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 BEN78_01660 1347778352bfee47684b0eb1d02098a6 357 Pfam PF00633 Helix-hairpin-helix motif 98 126 1.0E-7 T 13-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 BEN78_01660 1347778352bfee47684b0eb1d02098a6 357 SUPERFAMILY SSF48150 5 223 3.61E-76 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 BEN78_01660 1347778352bfee47684b0eb1d02098a6 357 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 191 207 - T 13-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 BEN78_01660 1347778352bfee47684b0eb1d02098a6 357 ProSitePatterns PS01155 Endonuclease III family signature. 101 130 - T 13-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 BEN78_01660 1347778352bfee47684b0eb1d02098a6 357 Gene3D G3DSA:1.10.340.30 20 131 1.8E-82 T 13-10-2018 BEN78_01660 1347778352bfee47684b0eb1d02098a6 357 SMART SM00478 38 189 2.0E-50 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 BEN78_01660 1347778352bfee47684b0eb1d02098a6 357 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 6 273 7.5E-105 T 13-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 BEN78_01660 1347778352bfee47684b0eb1d02098a6 357 SUPERFAMILY SSF55811 219 348 3.93E-22 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BEN78_01660 1347778352bfee47684b0eb1d02098a6 357 Gene3D G3DSA:1.10.1670.10 8 210 1.8E-82 T 13-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 BEN78_01660 1347778352bfee47684b0eb1d02098a6 357 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 165 1.5E-18 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 BEN78_01660 1347778352bfee47684b0eb1d02098a6 357 Gene3D G3DSA:3.90.79.10 225 350 1.5E-17 T 13-10-2018 BEN78_05795 26d7d47287c4051bfa45b31c5c09420f 881 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 170 5.6E-23 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_05795 26d7d47287c4051bfa45b31c5c09420f 881 Pfam PF00593 TonB dependent receptor 381 880 1.3E-53 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_05795 26d7d47287c4051bfa45b31c5c09420f 881 Gene3D G3DSA:2.170.130.10 34 175 6.9E-36 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_05795 26d7d47287c4051bfa45b31c5c09420f 881 SUPERFAMILY SSF56935 39 881 2.6E-105 T 13-10-2018 BEN78_05795 26d7d47287c4051bfa45b31c5c09420f 881 Gene3D G3DSA:2.40.170.20 370 881 1.9E-64 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_02195 1b84a8fd1dc9fa3950c3e74445dc1e47 156 TIGRFAM TIGR02944 suf_reg_Xantho: FeS assembly SUF system regulator 1 130 1.1E-52 T 13-10-2018 IPR014290 SUF system FeS cluster assembly regulator BEN78_02195 1b84a8fd1dc9fa3950c3e74445dc1e47 156 Pfam PF02082 Transcriptional regulator 3 82 1.6E-22 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type BEN78_02195 1b84a8fd1dc9fa3950c3e74445dc1e47 156 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 3 131 2.1E-31 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type BEN78_02195 1b84a8fd1dc9fa3950c3e74445dc1e47 156 Gene3D G3DSA:1.10.10.10 1 139 1.9E-36 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_02195 1b84a8fd1dc9fa3950c3e74445dc1e47 156 SUPERFAMILY SSF46785 3 134 3.55E-33 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_06285 fd2bfa9b4952432d2dce2a8952d4b83c 469 SMART SM01230 102 379 1.8E-140 T 13-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BEN78_06285 fd2bfa9b4952432d2dce2a8952d4b83c 469 Gene3D G3DSA:3.10.20.70 2 104 1.4E-38 T 13-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BEN78_06285 fd2bfa9b4952432d2dce2a8952d4b83c 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 13-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 BEN78_06285 fd2bfa9b4952432d2dce2a8952d4b83c 469 SUPERFAMILY SSF54368 3 101 6.54E-36 T 13-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BEN78_06285 fd2bfa9b4952432d2dce2a8952d4b83c 469 Gene3D G3DSA:3.30.590.10 105 456 2.5E-142 T 13-10-2018 BEN78_06285 fd2bfa9b4952432d2dce2a8952d4b83c 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 1.5E-29 T 13-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 BEN78_06285 fd2bfa9b4952432d2dce2a8952d4b83c 469 SUPERFAMILY SSF55931 102 467 4.32E-132 T 13-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 BEN78_06285 fd2bfa9b4952432d2dce2a8952d4b83c 469 Pfam PF00120 Glutamine synthetase, catalytic domain 102 466 6.5E-131 T 13-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BEN78_06285 fd2bfa9b4952432d2dce2a8952d4b83c 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 5 467 3.3E-195 T 13-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BEN78_06285 fd2bfa9b4952432d2dce2a8952d4b83c 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 13-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 BEN78_07530 dac44cbef65a8dce2df4ce3f6934c764 158 Gene3D G3DSA:3.40.50.1240 1 158 3.0E-40 T 13-10-2018 IPR029033 Histidine phosphatase superfamily BEN78_07530 dac44cbef65a8dce2df4ce3f6934c764 158 SMART SM00855 3 114 6.0E-7 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 BEN78_07530 dac44cbef65a8dce2df4ce3f6934c764 158 SUPERFAMILY SSF53254 1 143 1.37E-25 T 13-10-2018 IPR029033 Histidine phosphatase superfamily BEN78_07530 dac44cbef65a8dce2df4ce3f6934c764 158 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 93 6.5E-13 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 BEN78_16395 2036e71ae6f9afb86f194dc73d49a7bb 609 Pfam PF00271 Helicase conserved C-terminal domain 239 347 1.7E-28 T 13-10-2018 IPR001650 Helicase, C-terminal BEN78_16395 2036e71ae6f9afb86f194dc73d49a7bb 609 Gene3D G3DSA:3.40.50.300 222 437 9.9E-52 T 13-10-2018 BEN78_16395 2036e71ae6f9afb86f194dc73d49a7bb 609 Pfam PF00270 DEAD/DEAH box helicase 38 202 5.6E-50 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BEN78_16395 2036e71ae6f9afb86f194dc73d49a7bb 609 Pfam PF03880 DbpA RNA binding domain 498 568 1.7E-23 T 13-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain BEN78_16395 2036e71ae6f9afb86f194dc73d49a7bb 609 SUPERFAMILY SSF52540 81 368 8.62E-75 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_16395 2036e71ae6f9afb86f194dc73d49a7bb 609 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 8 570 47.037 T 13-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 BEN78_16395 2036e71ae6f9afb86f194dc73d49a7bb 609 Gene3D G3DSA:3.30.70.330 498 572 1.3E-14 T 13-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily BEN78_16395 2036e71ae6f9afb86f194dc73d49a7bb 609 SMART SM00487 32 230 4.8E-63 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN78_16395 2036e71ae6f9afb86f194dc73d49a7bb 609 SMART SM00490 266 347 7.1E-34 T 13-10-2018 IPR001650 Helicase, C-terminal BEN78_16395 2036e71ae6f9afb86f194dc73d49a7bb 609 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 161 169 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BEN78_16395 2036e71ae6f9afb86f194dc73d49a7bb 609 Gene3D G3DSA:3.40.50.300 14 219 1.4E-76 T 13-10-2018 BEN78_13265 f5bce589bef2e0b385cfa965ff637207 611 Gene3D G3DSA:1.10.8.60 8 229 4.5E-101 T 13-10-2018 BEN78_13265 f5bce589bef2e0b385cfa965ff637207 611 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 480 603 6.2E-9 T 13-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN78_13265 f5bce589bef2e0b385cfa965ff637207 611 SUPERFAMILY SSF52540 33 222 1.67E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_13265 f5bce589bef2e0b385cfa965ff637207 611 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 358 3.7E-123 T 13-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 BEN78_13265 f5bce589bef2e0b385cfa965ff637207 611 SUPERFAMILY SSF48019 249 364 2.89E-27 T 13-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 BEN78_13265 f5bce589bef2e0b385cfa965ff637207 611 SMART SM00382 37 188 5.9E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_13265 f5bce589bef2e0b385cfa965ff637207 611 Pfam PF13177 DNA polymerase III, delta subunit 20 178 1.7E-45 T 13-10-2018 BEN78_13265 f5bce589bef2e0b385cfa965ff637207 611 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 239 363 5.9E-25 T 13-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 BEN78_13265 f5bce589bef2e0b385cfa965ff637207 611 Gene3D G3DSA:3.40.50.300 13 177 4.5E-101 T 13-10-2018 BEN78_13265 f5bce589bef2e0b385cfa965ff637207 611 Gene3D G3DSA:1.20.272.10 247 364 1.0E-36 T 13-10-2018 BEN78_13265 f5bce589bef2e0b385cfa965ff637207 611 Gene3D G3DSA:3.30.300.150 468 588 2.2E-10 T 13-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN78_13265 f5bce589bef2e0b385cfa965ff637207 611 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 7.9E-6 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 BEN78_13265 f5bce589bef2e0b385cfa965ff637207 611 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 7.9E-6 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 BEN78_11385 9d0ab709dfa217071aac7a536346e819 488 Gene3D G3DSA:3.60.20.10 2 410 7.8E-144 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BEN78_11385 9d0ab709dfa217071aac7a536346e819 488 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 462 1.2E-158 T 13-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 BEN78_11385 9d0ab709dfa217071aac7a536346e819 488 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 462 44.595 T 13-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 BEN78_11385 9d0ab709dfa217071aac7a536346e819 488 SUPERFAMILY SSF53271 248 473 1.75E-67 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like BEN78_11385 9d0ab709dfa217071aac7a536346e819 488 Pfam PF13522 Glutamine amidotransferase domain 61 206 1.2E-16 T 13-10-2018 BEN78_11385 9d0ab709dfa217071aac7a536346e819 488 SUPERFAMILY SSF56235 2 255 3.09E-64 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BEN78_11385 9d0ab709dfa217071aac7a536346e819 488 Gene3D G3DSA:3.40.50.2020 275 439 7.8E-144 T 13-10-2018 BEN78_11385 9d0ab709dfa217071aac7a536346e819 488 PIRSF PIRSF000485 1 476 1.5E-152 T 13-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 BEN78_04530 1219b9b8d8b64c0592ad553a285de513 896 PIRSF PIRSF000156 1 896 0.0 T 13-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 BEN78_04530 1219b9b8d8b64c0592ad553a285de513 896 Gene3D G3DSA:3.40.50.970 476 710 2.0E-103 T 13-10-2018 BEN78_04530 1219b9b8d8b64c0592ad553a285de513 896 SUPERFAMILY SSF52922 708 894 4.01E-57 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BEN78_04530 1219b9b8d8b64c0592ad553a285de513 896 Gene3D G3DSA:3.40.50.970 59 475 1.1E-129 T 13-10-2018 BEN78_04530 1219b9b8d8b64c0592ad553a285de513 896 Gene3D G3DSA:3.40.50.920 711 895 4.1E-74 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BEN78_04530 1219b9b8d8b64c0592ad553a285de513 896 SUPERFAMILY SSF52518 478 705 1.53E-93 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold BEN78_04530 1219b9b8d8b64c0592ad553a285de513 896 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 104 295 2.3E-8 T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BEN78_04530 1219b9b8d8b64c0592ad553a285de513 896 SUPERFAMILY SSF52518 60 471 7.86E-134 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold BEN78_04530 1219b9b8d8b64c0592ad553a285de513 896 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 9 894 0.0 T 13-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 BEN78_06855 bdcea1e7415a33c4b3b91a8fa05892e6 339 Pfam PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family 4 251 6.2E-48 T 13-10-2018 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase GO:0003854|GO:0006694|GO:0016616|GO:0055114 BEN78_06855 bdcea1e7415a33c4b3b91a8fa05892e6 339 Gene3D G3DSA:3.40.50.720 1 333 5.0E-73 T 13-10-2018 BEN78_06855 bdcea1e7415a33c4b3b91a8fa05892e6 339 SUPERFAMILY SSF51735 1 330 2.9E-64 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_09370 638e41c8196b6b551635403cead3324c 167 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 22 157 9.3E-15 T 13-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 BEN78_09370 638e41c8196b6b551635403cead3324c 167 Pfam PF12019 Type II transport protein GspH 62 155 3.8E-7 T 13-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 BEN78_09370 638e41c8196b6b551635403cead3324c 167 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 23 45 0.001 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site BEN78_09370 638e41c8196b6b551635403cead3324c 167 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 24 44 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site BEN78_09370 638e41c8196b6b551635403cead3324c 167 SUPERFAMILY SSF54523 26 140 7.85E-9 T 13-10-2018 BEN78_12595 49f96c45ed9941baa52fa8d35bb95dcc 142 SUPERFAMILY SSF54197 18 140 1.07E-29 T 13-10-2018 IPR036265 HIT-like superfamily BEN78_12595 49f96c45ed9941baa52fa8d35bb95dcc 142 Gene3D G3DSA:3.30.428.10 5 141 3.9E-36 T 13-10-2018 IPR036265 HIT-like superfamily BEN78_12595 49f96c45ed9941baa52fa8d35bb95dcc 142 Pfam PF01230 HIT domain 27 106 1.1E-13 T 13-10-2018 IPR001310 Histidine triad (HIT) protein BEN78_12595 49f96c45ed9941baa52fa8d35bb95dcc 142 PIRSF PIRSF000714 9 141 5.8E-47 T 13-10-2018 IPR026026 Histidine triad hydrolase, Hint-type BEN78_11080 ad6f53c7b1f492c282bfdb48ebb2ee6e 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.8E-18 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11080 ad6f53c7b1f492c282bfdb48ebb2ee6e 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.8E-18 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11080 ad6f53c7b1f492c282bfdb48ebb2ee6e 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.8E-18 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11080 ad6f53c7b1f492c282bfdb48ebb2ee6e 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.066 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11080 ad6f53c7b1f492c282bfdb48ebb2ee6e 103 SUPERFAMILY SSF54999 5 102 3.79E-37 T 13-10-2018 IPR036838 Ribosomal protein S10 domain superfamily BEN78_11080 ad6f53c7b1f492c282bfdb48ebb2ee6e 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 13-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11080 ad6f53c7b1f492c282bfdb48ebb2ee6e 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 2.7E-35 T 13-10-2018 IPR027486 Ribosomal protein S10 domain BEN78_11080 ad6f53c7b1f492c282bfdb48ebb2ee6e 103 SMART SM01403 7 101 4.0E-56 T 13-10-2018 IPR027486 Ribosomal protein S10 domain BEN78_11080 ad6f53c7b1f492c282bfdb48ebb2ee6e 103 Gene3D G3DSA:3.30.70.600 1 103 7.5E-38 T 13-10-2018 IPR036838 Ribosomal protein S10 domain superfamily BEN78_11080 ad6f53c7b1f492c282bfdb48ebb2ee6e 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 6.3E-46 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_00330 f7bee67ae4c83495719281d56e3b9a91 429 SUPERFAMILY SSF57716 16 51 9.27E-12 T 13-10-2018 BEN78_00330 f7bee67ae4c83495719281d56e3b9a91 429 SUPERFAMILY SSF52540 64 407 8.01E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_00330 f7bee67ae4c83495719281d56e3b9a91 429 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 312 3.2E-49 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BEN78_00330 f7bee67ae4c83495719281d56e3b9a91 429 Gene3D G3DSA:1.10.8.60 318 426 1.1E-40 T 13-10-2018 BEN78_00330 f7bee67ae4c83495719281d56e3b9a91 429 SMART SM00994 15 54 3.7E-24 T 13-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 BEN78_00330 f7bee67ae4c83495719281d56e3b9a91 429 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 395 2.0E-16 T 13-10-2018 IPR019489 Clp ATPase, C-terminal BEN78_00330 f7bee67ae4c83495719281d56e3b9a91 429 Gene3D G3DSA:3.30.50.30 5 55 2.5E-25 T 13-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily BEN78_00330 f7bee67ae4c83495719281d56e3b9a91 429 SMART SM00382 113 316 2.7E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_00330 f7bee67ae4c83495719281d56e3b9a91 429 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 9 417 53.01 T 13-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 BEN78_00330 f7bee67ae4c83495719281d56e3b9a91 429 SMART SM01086 319 414 1.1E-34 T 13-10-2018 IPR019489 Clp ATPase, C-terminal BEN78_00330 f7bee67ae4c83495719281d56e3b9a91 429 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 14 414 4.2E-204 T 13-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 BEN78_00330 f7bee67ae4c83495719281d56e3b9a91 429 Gene3D G3DSA:3.40.50.300 59 317 1.4E-108 T 13-10-2018 BEN78_00330 f7bee67ae4c83495719281d56e3b9a91 429 Pfam PF06689 ClpX C4-type zinc finger 16 53 2.2E-20 T 13-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 BEN78_08035 15bc964de3f3c2878037358b6a378b3b 148 Pfam PF00582 Universal stress protein family 1 148 1.9E-35 T 13-10-2018 IPR006016 UspA BEN78_08035 15bc964de3f3c2878037358b6a378b3b 148 Gene3D G3DSA:3.40.50.620 1 148 3.1E-39 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_08035 15bc964de3f3c2878037358b6a378b3b 148 PRINTS PR01438 Universal stress protein signature 2 20 3.7E-18 T 13-10-2018 IPR006015 Universal stress protein A BEN78_08035 15bc964de3f3c2878037358b6a378b3b 148 PRINTS PR01438 Universal stress protein signature 108 120 3.7E-18 T 13-10-2018 IPR006015 Universal stress protein A BEN78_08035 15bc964de3f3c2878037358b6a378b3b 148 PRINTS PR01438 Universal stress protein signature 126 148 3.7E-18 T 13-10-2018 IPR006015 Universal stress protein A BEN78_08035 15bc964de3f3c2878037358b6a378b3b 148 SUPERFAMILY SSF52402 2 148 1.09E-37 T 13-10-2018 BEN78_11625 7ec185df4c7b1efb0d70248584c3f0a1 195 SUPERFAMILY SSF46609 2 83 1.57E-23 T 13-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN78_11625 7ec185df4c7b1efb0d70248584c3f0a1 195 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 91 192 6.0E-30 T 13-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN78_11625 7ec185df4c7b1efb0d70248584c3f0a1 195 Gene3D G3DSA:2.40.500.20 83 195 9.0E-34 T 13-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN78_11625 7ec185df4c7b1efb0d70248584c3f0a1 195 PIRSF PIRSF000349 1 195 8.5E-61 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN78_11625 7ec185df4c7b1efb0d70248584c3f0a1 195 SUPERFAMILY SSF54719 87 193 6.55E-34 T 13-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN78_11625 7ec185df4c7b1efb0d70248584c3f0a1 195 PRINTS PR01703 Manganese superoxide dismutase signature 157 169 7.2E-14 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN78_11625 7ec185df4c7b1efb0d70248584c3f0a1 195 PRINTS PR01703 Manganese superoxide dismutase signature 120 128 7.2E-14 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN78_11625 7ec185df4c7b1efb0d70248584c3f0a1 195 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 7.2E-14 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN78_11625 7ec185df4c7b1efb0d70248584c3f0a1 195 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 7.2E-14 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN78_11625 7ec185df4c7b1efb0d70248584c3f0a1 195 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 7.2E-14 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN78_11625 7ec185df4c7b1efb0d70248584c3f0a1 195 Gene3D G3DSA:1.10.287.990 20 81 3.8E-14 T 13-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN78_11625 7ec185df4c7b1efb0d70248584c3f0a1 195 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 4 82 1.7E-20 T 13-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN78_04355 1372441c059e0a6102b90d6b1fd494bf 656 SUPERFAMILY SSF53649 290 598 2.36E-57 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BEN78_04355 1372441c059e0a6102b90d6b1fd494bf 656 PIRSF PIRSF005091 5 640 2.0E-82 T 13-10-2018 IPR012160 Lipoteichoic acid synthase-like BEN78_04355 1372441c059e0a6102b90d6b1fd494bf 656 Gene3D G3DSA:3.40.720.10 283 569 2.1E-140 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BEN78_04355 1372441c059e0a6102b90d6b1fd494bf 656 Gene3D G3DSA:3.30.1120.80 571 650 2.1E-140 T 13-10-2018 BEN78_04355 1372441c059e0a6102b90d6b1fd494bf 656 Pfam PF00884 Sulfatase 292 562 3.5E-38 T 13-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 BEN78_05300 2f503cc5929fd8af4b4ececb34541f42 283 SUPERFAMILY SSF81324 31 241 2.93E-52 T 13-10-2018 BEN78_05300 2f503cc5929fd8af4b4ececb34541f42 283 Gene3D G3DSA:1.10.287.70 30 244 4.8E-55 T 13-10-2018 BEN78_05300 2f503cc5929fd8af4b4ececb34541f42 283 PRINTS PR00169 Potassium channel signature 66 89 1.7E-31 T 13-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 BEN78_05300 2f503cc5929fd8af4b4ececb34541f42 283 PRINTS PR00169 Potassium channel signature 128 154 1.7E-31 T 13-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 BEN78_05300 2f503cc5929fd8af4b4ececb34541f42 283 PRINTS PR00169 Potassium channel signature 186 208 1.7E-31 T 13-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 BEN78_05300 2f503cc5929fd8af4b4ececb34541f42 283 PRINTS PR00169 Potassium channel signature 24 52 1.7E-31 T 13-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 BEN78_05300 2f503cc5929fd8af4b4ececb34541f42 283 PRINTS PR00169 Potassium channel signature 92 112 1.7E-31 T 13-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 BEN78_05300 2f503cc5929fd8af4b4ececb34541f42 283 PRINTS PR00169 Potassium channel signature 215 241 1.7E-31 T 13-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 BEN78_05300 2f503cc5929fd8af4b4ececb34541f42 283 PRINTS PR00169 Potassium channel signature 157 180 1.7E-31 T 13-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 BEN78_05300 2f503cc5929fd8af4b4ececb34541f42 283 Pfam PF00520 Ion transport protein 32 239 1.7E-31 T 13-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 BEN78_15980 94c969e0b53e0f907a57e02fa89eb53e 242 SUPERFAMILY SSF46785 149 223 2.57E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_15980 94c969e0b53e0f907a57e02fa89eb53e 242 SMART SM00419 163 211 0.0033 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BEN78_15980 94c969e0b53e0f907a57e02fa89eb53e 242 SMART SM00100 13 131 0.0037 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain BEN78_15980 94c969e0b53e0f907a57e02fa89eb53e 242 Gene3D G3DSA:2.60.120.10 11 149 1.0E-6 T 13-10-2018 IPR014710 RmlC-like jelly roll fold BEN78_15980 94c969e0b53e0f907a57e02fa89eb53e 242 Gene3D G3DSA:1.10.10.10 150 218 1.2E-15 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_15980 94c969e0b53e0f907a57e02fa89eb53e 242 Pfam PF13545 Crp-like helix-turn-helix domain 153 217 1.7E-12 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BEN78_15980 94c969e0b53e0f907a57e02fa89eb53e 242 SUPERFAMILY SSF51206 13 136 6.81E-11 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like BEN78_15260 639230471163af7b0462b662c3b3cbfc 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 257 8.8E-40 T 13-10-2018 BEN78_15260 639230471163af7b0462b662c3b3cbfc 259 SUPERFAMILY SSF51735 6 258 8.92E-50 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_15260 639230471163af7b0462b662c3b3cbfc 259 Gene3D G3DSA:3.40.50.720 2 259 1.5E-62 T 13-10-2018 BEN78_15260 639230471163af7b0462b662c3b3cbfc 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 7.7E-16 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_15260 639230471163af7b0462b662c3b3cbfc 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 7.7E-16 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_15260 639230471163af7b0462b662c3b3cbfc 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 7.7E-16 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_15260 639230471163af7b0462b662c3b3cbfc 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 7.7E-16 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_05340 3d7e1579e263f20f9b006c2f67868049 196 SUPERFAMILY SSF88697 9 195 4.47E-47 T 13-10-2018 IPR015947 PUA-like superfamily BEN78_05340 3d7e1579e263f20f9b006c2f67868049 196 Gene3D G3DSA:1.10.4060.10 118 196 6.8E-10 T 13-10-2018 BEN78_05340 3d7e1579e263f20f9b006c2f67868049 196 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 195 1.2E-17 T 13-10-2018 IPR003111 Lon, substrate-binding domain BEN78_05340 3d7e1579e263f20f9b006c2f67868049 196 Gene3D G3DSA:2.30.130.40 7 117 2.2E-33 T 13-10-2018 BEN78_05340 3d7e1579e263f20f9b006c2f67868049 196 SMART SM00464 9 196 1.4E-6 T 13-10-2018 IPR003111 Lon, substrate-binding domain BEN78_10680 f49a3abeab01413f3685eeb9393c420f 1772 Gene3D G3DSA:3.40.50.300 1291 1444 1.6E-11 T 13-10-2018 BEN78_10680 f49a3abeab01413f3685eeb9393c420f 1772 Pfam PF12458 ATPase involved in DNA repair 43 490 2.4E-188 T 13-10-2018 IPR020958 Domain of unknown function DUF3686 BEN78_10680 f49a3abeab01413f3685eeb9393c420f 1772 Pfam PF07728 AAA domain (dynein-related subfamily) 1297 1423 6.2E-5 T 13-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 BEN78_10680 f49a3abeab01413f3685eeb9393c420f 1772 SUPERFAMILY SSF52540 1255 1442 1.65E-13 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_05765 4424a5e7ed78af90f6a316591d5bd221 107 Pfam PF08850 Domain of unknown function (DUF1820) 6 101 5.4E-35 T 13-10-2018 IPR014949 Protein of unknown function DUF1820 BEN78_05765 4424a5e7ed78af90f6a316591d5bd221 107 PIRSF PIRSF028538 1 107 1.8E-43 T 13-10-2018 IPR014949 Protein of unknown function DUF1820 BEN78_08210 19e5530a222472fd08c46fa8fd341002 251 SMART SM00862 158 234 3.7E-19 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN78_08210 19e5530a222472fd08c46fa8fd341002 251 SUPERFAMILY SSF46894 135 235 1.19E-22 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BEN78_08210 19e5530a222472fd08c46fa8fd341002 251 Gene3D G3DSA:3.40.50.2300 3 133 6.4E-36 T 13-10-2018 BEN78_08210 19e5530a222472fd08c46fa8fd341002 251 SUPERFAMILY SSF52172 7 136 5.55E-40 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_08210 19e5530a222472fd08c46fa8fd341002 251 Gene3D G3DSA:1.10.10.10 134 235 2.6E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_08210 19e5530a222472fd08c46fa8fd341002 251 SMART SM00448 13 123 4.8E-40 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_08210 19e5530a222472fd08c46fa8fd341002 251 Pfam PF00072 Response regulator receiver domain 15 124 2.3E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_08210 19e5530a222472fd08c46fa8fd341002 251 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 233 1.3E-18 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN78_10530 df3b79551c694d0a9248c6e396fd918b 448 Pfam PF07690 Major Facilitator Superfamily 73 345 3.5E-14 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN78_10530 df3b79551c694d0a9248c6e396fd918b 448 SUPERFAMILY SSF103473 24 439 9.16E-31 T 13-10-2018 IPR036259 MFS transporter superfamily BEN78_10530 df3b79551c694d0a9248c6e396fd918b 448 Gene3D G3DSA:1.20.1250.20 48 433 1.7E-25 T 13-10-2018 BEN78_07295 3102bbe896db56fbbe6eaa4e1fc0c062 234 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 193 203 - T 13-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BEN78_07295 3102bbe896db56fbbe6eaa4e1fc0c062 234 SUPERFAMILY SSF53681 1 116 2.49E-35 T 13-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BEN78_07295 3102bbe896db56fbbe6eaa4e1fc0c062 234 SUPERFAMILY SSF53681 104 209 4.58E-31 T 13-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BEN78_07295 3102bbe896db56fbbe6eaa4e1fc0c062 234 Gene3D G3DSA:3.40.50.1860 4 223 2.2E-84 T 13-10-2018 BEN78_07295 3102bbe896db56fbbe6eaa4e1fc0c062 234 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 224 6.5E-60 T 13-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BEN78_07295 3102bbe896db56fbbe6eaa4e1fc0c062 234 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 230 4.4E-67 T 13-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 BEN78_07295 3102bbe896db56fbbe6eaa4e1fc0c062 234 Gene3D G3DSA:3.40.50.1860 104 216 2.2E-84 T 13-10-2018 BEN78_14195 770753aa3659562fbdc0260eb10deb18 556 SUPERFAMILY SSF52540 1 513 5.94E-55 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_14195 770753aa3659562fbdc0260eb10deb18 556 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 509 5.6E-18 T 13-10-2018 IPR003395 RecF/RecN/SMC, N-terminal BEN78_14195 770753aa3659562fbdc0260eb10deb18 556 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 7.0E-144 T 13-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 BEN78_14195 770753aa3659562fbdc0260eb10deb18 556 Gene3D G3DSA:3.40.50.300 1 209 1.1E-40 T 13-10-2018 BEN78_14195 770753aa3659562fbdc0260eb10deb18 556 Gene3D G3DSA:3.40.50.300 261 553 6.3E-55 T 13-10-2018 BEN78_14195 770753aa3659562fbdc0260eb10deb18 556 PIRSF PIRSF003128 1 555 6.2E-149 T 13-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 BEN78_03355 b902d23157b9b6b197674f002f3298ea 73 Pfam PF04325 Protein of unknown function (DUF465) 20 66 1.4E-11 T 13-10-2018 IPR007420 Protein of unknown function DUF465 BEN78_03355 b902d23157b9b6b197674f002f3298ea 73 Gene3D G3DSA:1.20.58.660 1 73 2.4E-9 T 13-10-2018 BEN78_08045 eb32e6f6dac4a7b42917f64d3d8f6e2e 689 SUPERFAMILY SSF50494 58 656 3.5E-25 T 13-10-2018 IPR009003 Peptidase S1, PA clan BEN78_08045 eb32e6f6dac4a7b42917f64d3d8f6e2e 689 Pfam PF10459 Peptidase S46 31 686 6.7E-204 T 13-10-2018 IPR019500 Peptidase S46 GO:0008239|GO:0070009 BEN78_11025 d3b4a852fe728c0d12d870f9490f5149 190 SMART SM00739 136 163 4.1E-5 T 13-10-2018 IPR005824 KOW BEN78_11025 d3b4a852fe728c0d12d870f9490f5149 190 Gene3D G3DSA:3.30.70.940 2 130 3.3E-42 T 13-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 BEN78_11025 d3b4a852fe728c0d12d870f9490f5149 190 SUPERFAMILY SSF82679 7 126 4.58E-36 T 13-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 BEN78_11025 d3b4a852fe728c0d12d870f9490f5149 190 Gene3D G3DSA:2.30.30.30 131 189 1.1E-24 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 BEN78_11025 d3b4a852fe728c0d12d870f9490f5149 190 Pfam PF02357 Transcription termination factor nusG 7 121 4.5E-23 T 13-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 BEN78_11025 d3b4a852fe728c0d12d870f9490f5149 190 SMART SM00738 6 124 1.0E-41 T 13-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 BEN78_11025 d3b4a852fe728c0d12d870f9490f5149 190 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 190 24.388 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 BEN78_11025 d3b4a852fe728c0d12d870f9490f5149 190 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 189 9.4E-63 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 BEN78_11025 d3b4a852fe728c0d12d870f9490f5149 190 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 8.8E-19 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 BEN78_11025 d3b4a852fe728c0d12d870f9490f5149 190 PRINTS PR00338 Transcription termination factor NUSG signature 166 182 8.8E-19 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 BEN78_11025 d3b4a852fe728c0d12d870f9490f5149 190 PRINTS PR00338 Transcription termination factor NUSG signature 148 163 8.8E-19 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 BEN78_11025 d3b4a852fe728c0d12d870f9490f5149 190 Pfam PF00467 KOW motif 140 173 6.3E-7 T 13-10-2018 IPR005824 KOW BEN78_11025 d3b4a852fe728c0d12d870f9490f5149 190 SUPERFAMILY SSF50104 134 189 9.03E-19 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily BEN78_11025 d3b4a852fe728c0d12d870f9490f5149 190 ProSitePatterns PS01014 Transcription termination factor nusG signature. 173 182 - T 13-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site BEN78_02100 f82e084e08b8dba1e3265d4cff7d3b8b 231 Pfam PF00072 Response regulator receiver domain 5 114 2.0E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_02100 f82e084e08b8dba1e3265d4cff7d3b8b 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 222 6.6E-16 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN78_02100 f82e084e08b8dba1e3265d4cff7d3b8b 231 SUPERFAMILY SSF46894 127 223 3.4E-20 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BEN78_02100 f82e084e08b8dba1e3265d4cff7d3b8b 231 SMART SM00862 148 222 2.5E-19 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN78_02100 f82e084e08b8dba1e3265d4cff7d3b8b 231 SUPERFAMILY SSF52172 1 125 1.85E-37 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_02100 f82e084e08b8dba1e3265d4cff7d3b8b 231 Gene3D G3DSA:1.10.10.10 123 224 2.6E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_02100 f82e084e08b8dba1e3265d4cff7d3b8b 231 SMART SM00448 2 114 2.2E-38 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_02100 f82e084e08b8dba1e3265d4cff7d3b8b 231 Gene3D G3DSA:3.40.50.2300 1 122 1.4E-35 T 13-10-2018 BEN78_15425 b914bf762bd42e0a532111a49e1cbc3c 188 Gene3D G3DSA:2.40.50.140 66 127 1.5E-28 T 13-10-2018 BEN78_15425 b914bf762bd42e0a532111a49e1cbc3c 188 SUPERFAMILY SSF50249 130 187 6.85E-18 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN78_15425 b914bf762bd42e0a532111a49e1cbc3c 188 Gene3D G3DSA:2.30.30.30 1 65 3.4E-21 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 BEN78_15425 b914bf762bd42e0a532111a49e1cbc3c 188 TIGRFAM TIGR00038 efp: translation elongation factor P 6 187 9.8E-74 T 13-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 BEN78_15425 b914bf762bd42e0a532111a49e1cbc3c 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 48.136 T 13-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 BEN78_15425 b914bf762bd42e0a532111a49e1cbc3c 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 4.3E-21 T 13-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 BEN78_15425 b914bf762bd42e0a532111a49e1cbc3c 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 6 62 7.2E-21 T 13-10-2018 IPR013185 Translation elongation factor, KOW-like BEN78_15425 b914bf762bd42e0a532111a49e1cbc3c 188 SUPERFAMILY SSF50249 70 128 2.1E-16 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN78_15425 b914bf762bd42e0a532111a49e1cbc3c 188 Gene3D G3DSA:2.40.50.140 130 188 2.0E-27 T 13-10-2018 BEN78_15425 b914bf762bd42e0a532111a49e1cbc3c 188 SUPERFAMILY SSF50104 5 65 3.56E-17 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily BEN78_15425 b914bf762bd42e0a532111a49e1cbc3c 188 SMART SM00841 131 186 3.7E-32 T 13-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 BEN78_15425 b914bf762bd42e0a532111a49e1cbc3c 188 SMART SM01185 69 123 3.2E-23 T 13-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 BEN78_15425 b914bf762bd42e0a532111a49e1cbc3c 188 PIRSF PIRSF005901 2 188 7.9E-63 T 13-10-2018 IPR020599 Translation elongation factor P/YeiP BEN78_15425 b914bf762bd42e0a532111a49e1cbc3c 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 4.7E-25 T 13-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 BEN78_05170 fcde49d272bb0a5071bf96f46b9e7207 526 SUPERFAMILY SSF74650 35 404 1.73E-157 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 BEN78_05170 fcde49d272bb0a5071bf96f46b9e7207 526 SUPERFAMILY SSF81296 405 518 1.54E-23 T 13-10-2018 IPR014756 Immunoglobulin E-set BEN78_05170 fcde49d272bb0a5071bf96f46b9e7207 526 PIRSF PIRSF006281 5 519 3.9E-202 T 13-10-2018 IPR014438 Glucan biosynthesis protein MdoG/MdoD BEN78_05170 fcde49d272bb0a5071bf96f46b9e7207 526 Gene3D G3DSA:2.70.98.10 34 404 7.3E-162 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 BEN78_05170 fcde49d272bb0a5071bf96f46b9e7207 526 Hamap MF_01068 Glucans biosynthesis protein D [mdoD]. 1 525 58.107 T 13-10-2018 IPR023724 Glucan biosynthesis, MdoD BEN78_05170 fcde49d272bb0a5071bf96f46b9e7207 526 Gene3D G3DSA:2.60.40.10 413 522 2.1E-14 T 13-10-2018 IPR013783 Immunoglobulin-like fold BEN78_05170 fcde49d272bb0a5071bf96f46b9e7207 526 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 35 515 1.4E-198 T 13-10-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 BEN78_10130 d870732686fd802e302f828882327ab3 281 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 170 238 1.7E-8 T 13-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core BEN78_10130 d870732686fd802e302f828882327ab3 281 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 31 104 6.2E-27 T 13-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core BEN78_10130 d870732686fd802e302f828882327ab3 281 TIGRFAM TIGR00444 mazG: MazG family protein 14 269 2.9E-88 T 13-10-2018 IPR011551 NTP pyrophosphohydrolase MazG BEN78_10130 d870732686fd802e302f828882327ab3 281 SUPERFAMILY SSF101386 143 249 7.85E-26 T 13-10-2018 BEN78_10130 d870732686fd802e302f828882327ab3 281 Gene3D G3DSA:1.10.287.1080 135 274 5.4E-40 T 13-10-2018 BEN78_10130 d870732686fd802e302f828882327ab3 281 SUPERFAMILY SSF101386 8 109 1.87E-24 T 13-10-2018 BEN78_10130 d870732686fd802e302f828882327ab3 281 Gene3D G3DSA:1.10.287.1080 5 129 5.9E-46 T 13-10-2018 BEN78_16705 a15d216b55e9ee1ea6ef08e93b3594e4 382 SUPERFAMILY SSF88697 288 381 6.63E-22 T 13-10-2018 IPR015947 PUA-like superfamily BEN78_16705 a15d216b55e9ee1ea6ef08e93b3594e4 382 ProSitePatterns PS00902 Glutamate 5-kinase signature. 218 235 - T 13-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BEN78_16705 a15d216b55e9ee1ea6ef08e93b3594e4 382 TIGRFAM TIGR01027 proB: glutamate 5-kinase 19 380 2.9E-120 T 13-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BEN78_16705 a15d216b55e9ee1ea6ef08e93b3594e4 382 Gene3D G3DSA:2.30.130.10 277 382 1.4E-28 T 13-10-2018 IPR036974 PUA domain superfamily GO:0003723 BEN78_16705 a15d216b55e9ee1ea6ef08e93b3594e4 382 Pfam PF01472 PUA domain 288 365 2.4E-20 T 13-10-2018 IPR002478 PUA domain GO:0003723 BEN78_16705 a15d216b55e9ee1ea6ef08e93b3594e4 382 SMART SM00359 288 374 7.2E-15 T 13-10-2018 IPR002478 PUA domain GO:0003723 BEN78_16705 a15d216b55e9ee1ea6ef08e93b3594e4 382 PRINTS PR00474 Glutamate 5-kinase family signature 55 69 7.6E-40 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 BEN78_16705 a15d216b55e9ee1ea6ef08e93b3594e4 382 PRINTS PR00474 Glutamate 5-kinase family signature 127 148 7.6E-40 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 BEN78_16705 a15d216b55e9ee1ea6ef08e93b3594e4 382 PRINTS PR00474 Glutamate 5-kinase family signature 220 240 7.6E-40 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 BEN78_16705 a15d216b55e9ee1ea6ef08e93b3594e4 382 PRINTS PR00474 Glutamate 5-kinase family signature 159 186 7.6E-40 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 BEN78_16705 a15d216b55e9ee1ea6ef08e93b3594e4 382 SUPERFAMILY SSF53633 18 267 1.2E-59 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BEN78_16705 a15d216b55e9ee1ea6ef08e93b3594e4 382 Gene3D G3DSA:3.40.1160.10 11 276 2.0E-77 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BEN78_16705 a15d216b55e9ee1ea6ef08e93b3594e4 382 Hamap MF_00456 Glutamate 5-kinase [proB]. 18 270 34.065 T 13-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BEN78_16705 a15d216b55e9ee1ea6ef08e93b3594e4 382 PIRSF PIRSF000729 15 382 2.1E-126 T 13-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 BEN78_16705 a15d216b55e9ee1ea6ef08e93b3594e4 382 Pfam PF00696 Amino acid kinase family 19 246 2.3E-34 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 BEN78_10945 60e9b0e50c2b7bfd62c7ee3c8be9571b 432 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 322 415 1.4E-15 T 13-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BEN78_10945 60e9b0e50c2b7bfd62c7ee3c8be9571b 432 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 100 123 - T 13-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BEN78_10945 60e9b0e50c2b7bfd62c7ee3c8be9571b 432 SUPERFAMILY SSF69742 1 159 2.75E-46 T 13-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BEN78_10945 60e9b0e50c2b7bfd62c7ee3c8be9571b 432 SUPERFAMILY SSF51735 164 315 7.14E-30 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_10945 60e9b0e50c2b7bfd62c7ee3c8be9571b 432 Gene3D G3DSA:3.40.50.720 163 314 9.3E-44 T 13-10-2018 BEN78_10945 60e9b0e50c2b7bfd62c7ee3c8be9571b 432 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 29.084 T 13-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BEN78_10945 60e9b0e50c2b7bfd62c7ee3c8be9571b 432 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 157 1.3E-47 T 13-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BEN78_10945 60e9b0e50c2b7bfd62c7ee3c8be9571b 432 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 5 406 4.5E-120 T 13-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BEN78_10945 60e9b0e50c2b7bfd62c7ee3c8be9571b 432 PIRSF PIRSF000445 1 430 3.0E-143 T 13-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BEN78_10945 60e9b0e50c2b7bfd62c7ee3c8be9571b 432 SUPERFAMILY SSF69075 318 416 9.81E-18 T 13-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BEN78_10945 60e9b0e50c2b7bfd62c7ee3c8be9571b 432 Gene3D G3DSA:3.30.460.30 1 159 8.5E-54 T 13-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BEN78_10945 60e9b0e50c2b7bfd62c7ee3c8be9571b 432 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 173 306 2.7E-42 T 13-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase BEN78_00060 41ecfcc90ee9f1decb1cbb3aad0f4328 309 Gene3D G3DSA:3.40.190.10 167 270 2.5E-57 T 13-10-2018 BEN78_00060 41ecfcc90ee9f1decb1cbb3aad0f4328 309 Pfam PF03466 LysR substrate binding domain 90 294 4.9E-36 T 13-10-2018 IPR005119 LysR, substrate-binding BEN78_00060 41ecfcc90ee9f1decb1cbb3aad0f4328 309 Gene3D G3DSA:1.10.10.10 6 90 1.1E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_00060 41ecfcc90ee9f1decb1cbb3aad0f4328 309 SUPERFAMILY SSF46785 8 115 1.3E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_00060 41ecfcc90ee9f1decb1cbb3aad0f4328 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 1.1E-19 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_00060 41ecfcc90ee9f1decb1cbb3aad0f4328 309 SUPERFAMILY SSF53850 91 297 9.77E-38 T 13-10-2018 BEN78_00060 41ecfcc90ee9f1decb1cbb3aad0f4328 309 Gene3D G3DSA:3.40.190.10 94 295 2.5E-57 T 13-10-2018 BEN78_01855 96859413535b1d6437e34cc67fb5992f 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BEN78_01855 96859413535b1d6437e34cc67fb5992f 256 Gene3D G3DSA:3.40.50.720 1 255 1.0E-67 T 13-10-2018 BEN78_01855 96859413535b1d6437e34cc67fb5992f 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 253 9.4E-52 T 13-10-2018 BEN78_01855 96859413535b1d6437e34cc67fb5992f 256 SUPERFAMILY SSF51735 7 254 5.91E-65 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_01855 96859413535b1d6437e34cc67fb5992f 256 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 185 0.005 T 13-10-2018 BEN78_01855 96859413535b1d6437e34cc67fb5992f 256 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 232 251 3.2E-47 T 13-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BEN78_01855 96859413535b1d6437e34cc67fb5992f 256 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 102 122 3.2E-47 T 13-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BEN78_01855 96859413535b1d6437e34cc67fb5992f 256 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 82 99 3.2E-47 T 13-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BEN78_01855 96859413535b1d6437e34cc67fb5992f 256 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 15 32 3.2E-47 T 13-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BEN78_01855 96859413535b1d6437e34cc67fb5992f 256 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 206 225 3.2E-47 T 13-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BEN78_01855 96859413535b1d6437e34cc67fb5992f 256 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 167 190 3.2E-47 T 13-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BEN78_01855 96859413535b1d6437e34cc67fb5992f 256 TIGRFAM TIGR04316 dhbA_paeA: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 11 254 1.1E-97 T 13-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BEN78_02385 28f44aa98ca5624a17e15d2832f3bf25 429 PIRSF PIRSF009264 1 428 4.5E-183 T 13-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 BEN78_02385 28f44aa98ca5624a17e15d2832f3bf25 429 Pfam PF08013 Tagatose 6 phosphate kinase 4 423 1.8E-189 T 13-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 BEN78_02385 28f44aa98ca5624a17e15d2832f3bf25 429 TIGRFAM TIGR02810 agaZ_gatZ: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit 6 423 3.4E-188 T 13-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 BEN78_02385 28f44aa98ca5624a17e15d2832f3bf25 429 SUPERFAMILY SSF51569 5 423 9.77E-158 T 13-10-2018 BEN78_02385 28f44aa98ca5624a17e15d2832f3bf25 429 Gene3D G3DSA:3.20.20.70 17 286 2.2E-120 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_02385 28f44aa98ca5624a17e15d2832f3bf25 429 Gene3D G3DSA:1.10.400.20 287 423 1.1E-43 T 13-10-2018 BEN78_14755 1057803bb738e579ff2fb4a58fe2ed72 214 Gene3D G3DSA:2.50.20.10 24 211 4.3E-51 T 13-10-2018 BEN78_14755 1057803bb738e579ff2fb4a58fe2ed72 214 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 12 212 30.71 T 13-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 BEN78_14755 1057803bb738e579ff2fb4a58fe2ed72 214 SUPERFAMILY SSF89392 27 211 1.1E-47 T 13-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX BEN78_14755 1057803bb738e579ff2fb4a58fe2ed72 214 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 38 202 1.9E-50 T 13-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like BEN78_14755 1057803bb738e579ff2fb4a58fe2ed72 214 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 17 209 3.0E-19 T 13-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 BEN78_14685 76ee36fe921f94fce8cbc0f9b4576d5b 914 SUPERFAMILY SSF55785 112 222 3.14E-9 T 13-10-2018 IPR035965 PAS domain superfamily BEN78_14685 76ee36fe921f94fce8cbc0f9b4576d5b 914 Pfam PF08447 PAS fold 129 213 3.4E-14 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 BEN78_14685 76ee36fe921f94fce8cbc0f9b4576d5b 914 Gene3D G3DSA:3.30.450.20 97 215 4.3E-18 T 13-10-2018 BEN78_14685 76ee36fe921f94fce8cbc0f9b4576d5b 914 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 478 639 1.2E-25 T 13-10-2018 IPR000160 GGDEF domain BEN78_14685 76ee36fe921f94fce8cbc0f9b4576d5b 914 SMART SM00086 177 220 0.62 T 13-10-2018 IPR001610 PAC motif BEN78_14685 76ee36fe921f94fce8cbc0f9b4576d5b 914 SMART SM00086 430 471 0.25 T 13-10-2018 IPR001610 PAC motif BEN78_14685 76ee36fe921f94fce8cbc0f9b4576d5b 914 Pfam PF00990 Diguanylate cyclase, GGDEF domain 482 636 3.8E-31 T 13-10-2018 IPR000160 GGDEF domain BEN78_14685 76ee36fe921f94fce8cbc0f9b4576d5b 914 Gene3D G3DSA:3.30.450.20 349 468 1.1E-8 T 13-10-2018 BEN78_14685 76ee36fe921f94fce8cbc0f9b4576d5b 914 Gene3D G3DSA:3.30.70.270 476 651 2.9E-42 T 13-10-2018 BEN78_14685 76ee36fe921f94fce8cbc0f9b4576d5b 914 Pfam PF00563 EAL domain 657 891 2.7E-70 T 13-10-2018 IPR001633 EAL domain BEN78_14685 76ee36fe921f94fce8cbc0f9b4576d5b 914 SUPERFAMILY SSF141868 655 904 2.35E-85 T 13-10-2018 IPR035919 EAL domain superfamily BEN78_14685 76ee36fe921f94fce8cbc0f9b4576d5b 914 SUPERFAMILY SSF55785 343 469 3.14E-9 T 13-10-2018 IPR035965 PAS domain superfamily BEN78_14685 76ee36fe921f94fce8cbc0f9b4576d5b 914 SMART SM00052 650 896 8.7E-103 T 13-10-2018 IPR001633 EAL domain BEN78_14685 76ee36fe921f94fce8cbc0f9b4576d5b 914 SMART SM00267 471 640 4.1E-39 T 13-10-2018 IPR000160 GGDEF domain BEN78_14685 76ee36fe921f94fce8cbc0f9b4576d5b 914 SUPERFAMILY SSF55073 487 642 2.04E-34 T 13-10-2018 IPR029787 Nucleotide cyclase BEN78_14685 76ee36fe921f94fce8cbc0f9b4576d5b 914 Gene3D G3DSA:3.20.20.450 652 904 1.3E-94 T 13-10-2018 IPR035919 EAL domain superfamily BEN78_08140 2fd74d2f1f0e89371b5767de7a01a8b2 473 Gene3D G3DSA:3.30.870.10 111 295 5.5E-35 T 13-10-2018 BEN78_08140 2fd74d2f1f0e89371b5767de7a01a8b2 473 SMART SM00155 215 242 1.7E-4 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BEN78_08140 2fd74d2f1f0e89371b5767de7a01a8b2 473 SMART SM00155 386 413 0.0045 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BEN78_08140 2fd74d2f1f0e89371b5767de7a01a8b2 473 SUPERFAMILY SSF56024 103 302 3.14E-46 T 13-10-2018 BEN78_08140 2fd74d2f1f0e89371b5767de7a01a8b2 473 Pfam PF13091 PLD-like domain 132 272 6.4E-18 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BEN78_08140 2fd74d2f1f0e89371b5767de7a01a8b2 473 Pfam PF13091 PLD-like domain 315 434 2.5E-24 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BEN78_08140 2fd74d2f1f0e89371b5767de7a01a8b2 473 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 13 469 8.8E-97 T 13-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 BEN78_08140 2fd74d2f1f0e89371b5767de7a01a8b2 473 Pfam PF13396 Phospholipase_D-nuclease N-terminal 21 58 8.5E-5 T 13-10-2018 IPR027379 Cardiolipin synthase N-terminal BEN78_08140 2fd74d2f1f0e89371b5767de7a01a8b2 473 Gene3D G3DSA:3.30.870.10 296 471 2.3E-27 T 13-10-2018 BEN78_08140 2fd74d2f1f0e89371b5767de7a01a8b2 473 SUPERFAMILY SSF56024 264 460 2.92E-49 T 13-10-2018 BEN78_00460 b3e9bcfa7a012ccb3fb866ef49c56679 195 Pfam PF13302 Acetyltransferase (GNAT) domain 22 161 3.1E-10 T 13-10-2018 IPR000182 GNAT domain BEN78_00460 b3e9bcfa7a012ccb3fb866ef49c56679 195 Gene3D G3DSA:3.40.630.30 13 189 6.2E-39 T 13-10-2018 BEN78_00460 b3e9bcfa7a012ccb3fb866ef49c56679 195 SUPERFAMILY SSF55729 19 164 1.63E-20 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN78_16225 7a4fa534255e07e67f0dd73ebb766f38 291 Gene3D G3DSA:3.40.190.10 5 269 2.7E-29 T 13-10-2018 BEN78_16225 7a4fa534255e07e67f0dd73ebb766f38 291 SUPERFAMILY SSF53850 5 255 8.25E-11 T 13-10-2018 BEN78_16225 7a4fa534255e07e67f0dd73ebb766f38 291 Pfam PF09084 NMT1/THI5 like 12 228 2.6E-25 T 13-10-2018 IPR015168 SsuA/THI5-like BEN78_16225 7a4fa534255e07e67f0dd73ebb766f38 291 Gene3D G3DSA:3.40.190.10 82 188 2.7E-29 T 13-10-2018 BEN78_10040 c128309560135b71c76a464cc13a3188 693 SUPERFAMILY SSF52540 29 638 1.81E-22 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_10040 c128309560135b71c76a464cc13a3188 693 Pfam PF13307 Helicase C-terminal domain 495 655 1.7E-32 T 13-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 BEN78_10040 c128309560135b71c76a464cc13a3188 693 Gene3D G3DSA:3.40.50.300 481 674 2.3E-34 T 13-10-2018 BEN78_10040 c128309560135b71c76a464cc13a3188 693 SMART SM00491 511 642 2.6E-34 T 13-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 BEN78_10040 c128309560135b71c76a464cc13a3188 693 Gene3D G3DSA:3.40.50.300 30 269 8.4E-42 T 13-10-2018 BEN78_03295 32f6ec25ee85185a86731ef5701bc8a7 185 Gene3D G3DSA:2.60.120.10 1 185 1.1E-72 T 13-10-2018 IPR014710 RmlC-like jelly roll fold BEN78_03295 32f6ec25ee85185a86731ef5701bc8a7 185 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 174 2.1E-80 T 13-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 BEN78_03295 32f6ec25ee85185a86731ef5701bc8a7 185 SUPERFAMILY SSF51182 1 177 9.79E-76 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily BEN78_03295 32f6ec25ee85185a86731ef5701bc8a7 185 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 5 174 2.2E-73 T 13-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 BEN78_03295 32f6ec25ee85185a86731ef5701bc8a7 185 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 175 3.0E-83 T 13-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 BEN78_03890 aadc1fc663beff1f1f2cf777cd479672 303 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 3 295 36.722 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BEN78_03890 aadc1fc663beff1f1f2cf777cd479672 303 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 210 1.0E-74 T 13-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BEN78_03890 aadc1fc663beff1f1f2cf777cd479672 303 Gene3D G3DSA:3.40.190.10 101 200 8.9E-82 T 13-10-2018 BEN78_03890 aadc1fc663beff1f1f2cf777cd479672 303 SUPERFAMILY SSF53850 2 216 8.15E-81 T 13-10-2018 BEN78_03890 aadc1fc663beff1f1f2cf777cd479672 303 Gene3D G3DSA:3.30.160.40 219 302 3.1E-20 T 13-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BEN78_03890 aadc1fc663beff1f1f2cf777cd479672 303 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 229 245 - T 13-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BEN78_03890 aadc1fc663beff1f1f2cf777cd479672 303 SUPERFAMILY SSF54782 218 301 2.48E-19 T 13-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BEN78_03890 aadc1fc663beff1f1f2cf777cd479672 303 PIRSF PIRSF001438 1 302 2.8E-110 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BEN78_03890 aadc1fc663beff1f1f2cf777cd479672 303 PRINTS PR00151 Porphobilinogen deaminase signature 43 63 4.8E-44 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BEN78_03890 aadc1fc663beff1f1f2cf777cd479672 303 PRINTS PR00151 Porphobilinogen deaminase signature 228 245 4.8E-44 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BEN78_03890 aadc1fc663beff1f1f2cf777cd479672 303 PRINTS PR00151 Porphobilinogen deaminase signature 122 139 4.8E-44 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BEN78_03890 aadc1fc663beff1f1f2cf777cd479672 303 PRINTS PR00151 Porphobilinogen deaminase signature 141 158 4.8E-44 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BEN78_03890 aadc1fc663beff1f1f2cf777cd479672 303 PRINTS PR00151 Porphobilinogen deaminase signature 74 93 4.8E-44 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BEN78_03890 aadc1fc663beff1f1f2cf777cd479672 303 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 225 293 2.4E-12 T 13-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BEN78_03890 aadc1fc663beff1f1f2cf777cd479672 303 Gene3D G3DSA:3.40.190.10 4 206 8.9E-82 T 13-10-2018 BEN78_03890 aadc1fc663beff1f1f2cf777cd479672 303 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 294 3.2E-101 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BEN78_11575 78a05bafb49b7dfe5882b3a461cd704d 612 ProSitePatterns PS00211 ABC transporters family signature. 504 518 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN78_11575 78a05bafb49b7dfe5882b3a461cd704d 612 SMART SM00382 387 578 3.5E-21 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_11575 78a05bafb49b7dfe5882b3a461cd704d 612 Gene3D G3DSA:3.40.50.300 354 606 1.1E-91 T 13-10-2018 BEN78_11575 78a05bafb49b7dfe5882b3a461cd704d 612 SUPERFAMILY SSF52540 352 602 1.87E-90 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_11575 78a05bafb49b7dfe5882b3a461cd704d 612 Pfam PF00005 ABC transporter 380 532 5.3E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_11575 78a05bafb49b7dfe5882b3a461cd704d 612 Pfam PF00664 ABC transporter transmembrane region 42 309 2.4E-17 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BEN78_11575 78a05bafb49b7dfe5882b3a461cd704d 612 SUPERFAMILY SSF90123 21 343 2.22E-54 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BEN78_11575 78a05bafb49b7dfe5882b3a461cd704d 612 Gene3D G3DSA:1.20.1560.10 7 335 1.3E-31 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BEN78_06900 e50ebf808a4881fe5e24ca03c2ff6769 349 Gene3D G3DSA:3.40.1090.10 44 147 3.6E-22 T 13-10-2018 BEN78_06900 e50ebf808a4881fe5e24ca03c2ff6769 349 SUPERFAMILY SSF52151 53 306 3.66E-60 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BEN78_06900 e50ebf808a4881fe5e24ca03c2ff6769 349 Pfam PF01734 Patatin-like phospholipase 60 217 1.0E-28 T 13-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 BEN78_06900 e50ebf808a4881fe5e24ca03c2ff6769 349 Gene3D G3DSA:3.40.1090.20 177 227 1.1E-6 T 13-10-2018 BEN78_05805 d7d79597c0f85479e145791f10e17525 338 Gene3D G3DSA:3.40.190.10 167 267 2.4E-53 T 13-10-2018 BEN78_05805 d7d79597c0f85479e145791f10e17525 338 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 3.3E-17 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_05805 d7d79597c0f85479e145791f10e17525 338 Gene3D G3DSA:3.40.190.10 92 292 2.4E-53 T 13-10-2018 BEN78_05805 d7d79597c0f85479e145791f10e17525 338 Pfam PF03466 LysR substrate binding domain 89 282 2.1E-34 T 13-10-2018 IPR005119 LysR, substrate-binding BEN78_05805 d7d79597c0f85479e145791f10e17525 338 Gene3D G3DSA:1.10.10.10 1 86 9.7E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_05805 d7d79597c0f85479e145791f10e17525 338 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.8E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_05805 d7d79597c0f85479e145791f10e17525 338 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.8E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_05805 d7d79597c0f85479e145791f10e17525 338 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.8E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_05805 d7d79597c0f85479e145791f10e17525 338 SUPERFAMILY SSF53850 91 297 1.76E-34 T 13-10-2018 BEN78_05805 d7d79597c0f85479e145791f10e17525 338 SUPERFAMILY SSF46785 1 112 3.8E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_02735 bf275e885fcc224973fd08b345b1e3b9 149 PIRSF PIRSF003230 6 148 1.5E-43 T 13-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 BEN78_02735 bf275e885fcc224973fd08b345b1e3b9 149 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 20 37 - T 13-10-2018 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 BEN78_02735 bf275e885fcc224973fd08b345b1e3b9 149 SUPERFAMILY SSF54637 13 142 4.67E-39 T 13-10-2018 IPR029069 HotDog domain superfamily BEN78_02735 bf275e885fcc224973fd08b345b1e3b9 149 Gene3D G3DSA:3.10.129.10 7 144 5.5E-38 T 13-10-2018 BEN78_02735 bf275e885fcc224973fd08b345b1e3b9 149 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 18 132 1.0E-31 T 13-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 BEN78_02735 bf275e885fcc224973fd08b345b1e3b9 149 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 15 138 2.5E-49 T 13-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 BEN78_02735 bf275e885fcc224973fd08b345b1e3b9 149 Pfam PF03061 Thioesterase superfamily 29 111 3.4E-19 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 BEN78_07615 b7ce53ee5f21db67b95816e7e905baab 575 Pfam PF08278 DNA primase DnaG DnaB-binding 446 569 4.1E-27 T 13-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 BEN78_07615 b7ce53ee5f21db67b95816e7e905baab 575 SMART SM00766 445 570 9.9E-26 T 13-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 BEN78_07615 b7ce53ee5f21db67b95816e7e905baab 575 Pfam PF10410 DnaB-helicase binding domain of primase 366 418 4.9E-11 T 13-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 BEN78_07615 b7ce53ee5f21db67b95816e7e905baab 575 Pfam PF13662 Toprim domain 256 321 6.1E-16 T 13-10-2018 IPR006171 TOPRIM domain BEN78_07615 b7ce53ee5f21db67b95816e7e905baab 575 SMART SM00400 35 89 6.2E-32 T 13-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 BEN78_07615 b7ce53ee5f21db67b95816e7e905baab 575 Gene3D G3DSA:3.90.980.10 108 236 7.4E-39 T 13-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily BEN78_07615 b7ce53ee5f21db67b95816e7e905baab 575 Gene3D G3DSA:3.90.580.10 1 101 3.9E-37 T 13-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 BEN78_07615 b7ce53ee5f21db67b95816e7e905baab 575 SUPERFAMILY SSF117023 442 573 1.02E-30 T 13-10-2018 BEN78_07615 b7ce53ee5f21db67b95816e7e905baab 575 TIGRFAM TIGR01391 dnaG: DNA primase 3 413 2.2E-136 T 13-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 BEN78_07615 b7ce53ee5f21db67b95816e7e905baab 575 Hamap MF_00974 DNA primase [dnaG]. 3 574 28.001 T 13-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 BEN78_07615 b7ce53ee5f21db67b95816e7e905baab 575 Gene3D G3DSA:1.20.50.20 364 418 5.0E-12 T 13-10-2018 BEN78_07615 b7ce53ee5f21db67b95816e7e905baab 575 SUPERFAMILY SSF57783 1 99 1.67E-35 T 13-10-2018 BEN78_07615 b7ce53ee5f21db67b95816e7e905baab 575 Gene3D G3DSA:1.10.860.10 437 574 3.9E-34 T 13-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal BEN78_07615 b7ce53ee5f21db67b95816e7e905baab 575 SUPERFAMILY SSF56731 112 417 6.54E-102 T 13-10-2018 BEN78_07615 b7ce53ee5f21db67b95816e7e905baab 575 Pfam PF01807 CHC2 zinc finger 5 99 5.0E-38 T 13-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 BEN78_07615 b7ce53ee5f21db67b95816e7e905baab 575 Pfam PF08275 DNA primase catalytic core, N-terminal domain 122 247 2.0E-39 T 13-10-2018 IPR013264 DNA primase, catalytic core, N-terminal BEN78_07615 b7ce53ee5f21db67b95816e7e905baab 575 Gene3D G3DSA:3.40.1360.10 237 363 2.3E-40 T 13-10-2018 BEN78_07615 b7ce53ee5f21db67b95816e7e905baab 575 SMART SM00493 255 326 2.8E-16 T 13-10-2018 IPR006171 TOPRIM domain BEN78_16520 cd6e6595031bd6fe37b64a93cd37ca7d 684 SUPERFAMILY SSF54556 578 641 5.92E-13 T 13-10-2018 IPR029070 Chitinase insertion domain superfamily BEN78_16520 cd6e6595031bd6fe37b64a93cd37ca7d 684 SMART SM00060 187 264 2.8E-8 T 13-10-2018 IPR003961 Fibronectin type III GO:0005515 BEN78_16520 cd6e6595031bd6fe37b64a93cd37ca7d 684 Gene3D G3DSA:3.10.50.10 586 650 1.5E-145 T 13-10-2018 IPR029070 Chitinase insertion domain superfamily BEN78_16520 cd6e6595031bd6fe37b64a93cd37ca7d 684 SUPERFAMILY SSF49265 184 276 9.73E-14 T 13-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 BEN78_16520 cd6e6595031bd6fe37b64a93cd37ca7d 684 Gene3D G3DSA:3.20.20.80 286 678 1.5E-145 T 13-10-2018 BEN78_16520 cd6e6595031bd6fe37b64a93cd37ca7d 684 ProSitePatterns PS01095 Chitinases family 18 active site. 444 452 - T 13-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 BEN78_16520 cd6e6595031bd6fe37b64a93cd37ca7d 684 SMART SM00495 32 77 2.0E-6 T 13-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 BEN78_16520 cd6e6595031bd6fe37b64a93cd37ca7d 684 SUPERFAMILY SSF51445 277 675 1.89E-94 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily BEN78_16520 cd6e6595031bd6fe37b64a93cd37ca7d 684 Gene3D G3DSA:2.10.10.20 18 82 2.6E-6 T 13-10-2018 BEN78_16520 cd6e6595031bd6fe37b64a93cd37ca7d 684 SUPERFAMILY SSF51055 22 57 1.15E-6 T 13-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 BEN78_16520 cd6e6595031bd6fe37b64a93cd37ca7d 684 SMART SM00636 283 669 3.7E-141 T 13-10-2018 IPR011583 Chitinase II GO:0008061 BEN78_16520 cd6e6595031bd6fe37b64a93cd37ca7d 684 Pfam PF00704 Glycosyl hydrolases family 18 284 669 1.3E-89 T 13-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 BEN78_16520 cd6e6595031bd6fe37b64a93cd37ca7d 684 Gene3D G3DSA:2.60.40.10 185 274 5.4E-22 T 13-10-2018 IPR013783 Immunoglobulin-like fold BEN78_16520 cd6e6595031bd6fe37b64a93cd37ca7d 684 Gene3D G3DSA:2.60.40.10 88 178 3.5E-29 T 13-10-2018 IPR013783 Immunoglobulin-like fold BEN78_05870 535d223f263588cb2a2105884db92a1e 260 Gene3D G3DSA:1.25.40.20 17 258 2.0E-37 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily BEN78_05870 535d223f263588cb2a2105884db92a1e 260 Pfam PF12796 Ankyrin repeats (3 copies) 123 216 9.4E-11 T 13-10-2018 IPR020683 Ankyrin repeat-containing domain BEN78_05870 535d223f263588cb2a2105884db92a1e 260 SUPERFAMILY SSF48403 45 221 7.3E-34 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily BEN78_05870 535d223f263588cb2a2105884db92a1e 260 SMART SM00248 52 81 3400.0 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 BEN78_05870 535d223f263588cb2a2105884db92a1e 260 SMART SM00248 152 181 3.6 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 BEN78_05870 535d223f263588cb2a2105884db92a1e 260 SMART SM00248 185 214 150.0 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 BEN78_05870 535d223f263588cb2a2105884db92a1e 260 SMART SM00248 85 114 400.0 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 BEN78_05870 535d223f263588cb2a2105884db92a1e 260 SMART SM00248 118 147 0.0021 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 BEN78_11780 736974e1fa1bd2c539311ffaaddf8a0b 350 Gene3D G3DSA:3.40.1780.10 14 338 7.4E-116 T 13-10-2018 BEN78_11780 736974e1fa1bd2c539311ffaaddf8a0b 350 Pfam PF02547 Queuosine biosynthesis protein 4 338 3.2E-132 T 13-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 BEN78_11780 736974e1fa1bd2c539311ffaaddf8a0b 350 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 3 338 1.0E-129 T 13-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 BEN78_11780 736974e1fa1bd2c539311ffaaddf8a0b 350 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 339 46.643 T 13-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 BEN78_11780 736974e1fa1bd2c539311ffaaddf8a0b 350 SUPERFAMILY SSF111337 2 338 2.35E-133 T 13-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 BEN78_11780 736974e1fa1bd2c539311ffaaddf8a0b 350 Gene3D G3DSA:2.40.10.240 64 161 7.4E-116 T 13-10-2018 BEN78_15805 73c7f9161f35104b6f9eb33fc03df041 439 SUPERFAMILY SSF103473 24 432 1.12E-38 T 13-10-2018 IPR036259 MFS transporter superfamily BEN78_15805 73c7f9161f35104b6f9eb33fc03df041 439 Pfam PF00083 Sugar (and other) transporter 29 250 4.6E-19 T 13-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 BEN78_15805 73c7f9161f35104b6f9eb33fc03df041 439 Gene3D G3DSA:1.20.1250.20 27 439 4.8E-42 T 13-10-2018 BEN78_15805 73c7f9161f35104b6f9eb33fc03df041 439 ProSitePatterns PS00216 Sugar transport proteins signature 1. 309 326 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BEN78_14465 3ebdeaeabba5635bddcf6526e57f9ed0 689 Gene3D G3DSA:1.10.8.540 503 591 3.3E-22 T 13-10-2018 BEN78_14465 3ebdeaeabba5635bddcf6526e57f9ed0 689 PIRSF PIRSF005419 10 689 5.3E-241 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BEN78_14465 3ebdeaeabba5635bddcf6526e57f9ed0 689 Gene3D G3DSA:1.10.490.80 594 688 8.1E-11 T 13-10-2018 BEN78_14465 3ebdeaeabba5635bddcf6526e57f9ed0 689 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 19 688 1.2E-253 T 13-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 BEN78_14465 3ebdeaeabba5635bddcf6526e57f9ed0 689 Gene3D G3DSA:3.40.30.60 359 502 1.3E-53 T 13-10-2018 BEN78_14465 3ebdeaeabba5635bddcf6526e57f9ed0 689 Pfam PF00771 FHIPEP family 26 679 3.5E-259 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BEN78_14465 3ebdeaeabba5635bddcf6526e57f9ed0 689 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 185 202 4.1E-53 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BEN78_14465 3ebdeaeabba5635bddcf6526e57f9ed0 689 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 69 88 4.1E-53 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BEN78_14465 3ebdeaeabba5635bddcf6526e57f9ed0 689 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 236 250 4.1E-53 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BEN78_14465 3ebdeaeabba5635bddcf6526e57f9ed0 689 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 136 152 4.1E-53 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BEN78_14465 3ebdeaeabba5635bddcf6526e57f9ed0 689 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 155 173 4.1E-53 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BEN78_14465 3ebdeaeabba5635bddcf6526e57f9ed0 689 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 32 45 4.1E-53 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BEN78_15575 c3b1458a912a4d32817971acea4b33b6 261 SUPERFAMILY SSF54292 26 129 3.46E-31 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 BEN78_15575 c3b1458a912a4d32817971acea4b33b6 261 Gene3D G3DSA:3.10.20.30 19 129 3.3E-45 T 13-10-2018 IPR012675 Beta-grasp domain superfamily BEN78_15575 c3b1458a912a4d32817971acea4b33b6 261 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 80 88 - T 13-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 BEN78_15575 c3b1458a912a4d32817971acea4b33b6 261 SUPERFAMILY SSF46548 131 258 3.31E-39 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BEN78_15575 c3b1458a912a4d32817971acea4b33b6 261 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 32 253 3.1E-84 T 13-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 BEN78_15575 c3b1458a912a4d32817971acea4b33b6 261 Gene3D G3DSA:1.10.1060.10 130 261 8.9E-59 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BEN78_15575 c3b1458a912a4d32817971acea4b33b6 261 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 172 183 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BEN78_15575 c3b1458a912a4d32817971acea4b33b6 261 Pfam PF13534 4Fe-4S dicluster domain 171 244 7.0E-10 T 13-10-2018 BEN78_15575 c3b1458a912a4d32817971acea4b33b6 261 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 29 134 3.0E-33 T 13-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 BEN78_10015 2ba9daa4933863d33a6a35f86feacab1 718 Gene3D G3DSA:3.30.70.260 643 718 1.9E-10 T 13-10-2018 BEN78_10015 2ba9daa4933863d33a6a35f86feacab1 718 SUPERFAMILY SSF81301 188 365 3.11E-59 T 13-10-2018 BEN78_10015 2ba9daa4933863d33a6a35f86feacab1 718 Pfam PF04607 Region found in RelA / SpoT proteins 231 340 8.2E-36 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 BEN78_10015 2ba9daa4933863d33a6a35f86feacab1 718 SUPERFAMILY SSF55021 646 713 2.06E-5 T 13-10-2018 BEN78_10015 2ba9daa4933863d33a6a35f86feacab1 718 Pfam PF13328 HD domain 49 172 1.7E-15 T 13-10-2018 IPR003607 HD/PDEase domain BEN78_10015 2ba9daa4933863d33a6a35f86feacab1 718 Gene3D G3DSA:3.30.460.10 189 321 2.9E-48 T 13-10-2018 BEN78_10015 2ba9daa4933863d33a6a35f86feacab1 718 Pfam PF02824 TGS domain 389 448 5.4E-20 T 13-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 BEN78_10015 2ba9daa4933863d33a6a35f86feacab1 718 Gene3D G3DSA:1.10.3210.10 50 187 4.8E-21 T 13-10-2018 BEN78_10015 2ba9daa4933863d33a6a35f86feacab1 718 Gene3D G3DSA:3.10.20.30 382 453 1.2E-30 T 13-10-2018 IPR012675 Beta-grasp domain superfamily BEN78_10015 2ba9daa4933863d33a6a35f86feacab1 718 SMART SM00954 231 341 6.1E-62 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 BEN78_10015 2ba9daa4933863d33a6a35f86feacab1 718 Pfam PF13291 ACT domain 642 717 9.8E-12 T 13-10-2018 IPR002912 ACT domain BEN78_10015 2ba9daa4933863d33a6a35f86feacab1 718 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 105 712 1.3E-153 T 13-10-2018 IPR004811 RelA/SpoT family GO:0015969 BEN78_10015 2ba9daa4933863d33a6a35f86feacab1 718 SUPERFAMILY SSF81271 383 448 2.05E-19 T 13-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 BEN78_10015 2ba9daa4933863d33a6a35f86feacab1 718 SUPERFAMILY SSF109604 108 187 4.08E-19 T 13-10-2018 BEN78_16390 a88f3d7304e6ad6d2af9cd7926342e85 226 Pfam PF00043 Glutathione S-transferase, C-terminal domain 134 210 6.9E-6 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal BEN78_16390 a88f3d7304e6ad6d2af9cd7926342e85 226 SUPERFAMILY SSF47616 89 221 4.73E-21 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BEN78_16390 a88f3d7304e6ad6d2af9cd7926342e85 226 Pfam PF02798 Glutathione S-transferase, N-terminal domain 6 73 2.3E-13 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 BEN78_16390 a88f3d7304e6ad6d2af9cd7926342e85 226 Gene3D G3DSA:1.20.1050.10 89 215 1.1E-26 T 13-10-2018 BEN78_16390 a88f3d7304e6ad6d2af9cd7926342e85 226 SUPERFAMILY SSF52833 2 87 1.66E-17 T 13-10-2018 IPR036249 Thioredoxin-like superfamily BEN78_16390 a88f3d7304e6ad6d2af9cd7926342e85 226 Gene3D G3DSA:3.40.30.10 1 86 4.0E-31 T 13-10-2018 BEN78_10150 20fc97a7c5468070ec62fef49e2a0538 437 SMART SM00387 332 436 3.0E-20 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_10150 20fc97a7c5468070ec62fef49e2a0538 437 SUPERFAMILY SSF47384 209 285 5.1E-14 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN78_10150 20fc97a7c5468070ec62fef49e2a0538 437 Gene3D G3DSA:1.10.287.130 172 288 2.5E-17 T 13-10-2018 BEN78_10150 20fc97a7c5468070ec62fef49e2a0538 437 SMART SM00388 223 289 2.9E-13 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_10150 20fc97a7c5468070ec62fef49e2a0538 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 378 1.5E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_10150 20fc97a7c5468070ec62fef49e2a0538 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 414 1.5E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_10150 20fc97a7c5468070ec62fef49e2a0538 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 433 1.5E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_10150 20fc97a7c5468070ec62fef49e2a0538 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 392 1.5E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_10150 20fc97a7c5468070ec62fef49e2a0538 437 SUPERFAMILY SSF55874 283 432 3.27E-30 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_10150 20fc97a7c5468070ec62fef49e2a0538 437 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 340 433 1.8E-16 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_10150 20fc97a7c5468070ec62fef49e2a0538 437 Pfam PF00512 His Kinase A (phospho-acceptor) domain 225 287 1.4E-10 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_10150 20fc97a7c5468070ec62fef49e2a0538 437 Gene3D G3DSA:3.30.565.10 289 435 5.8E-29 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_08715 bd024ab0162ec144cba6326d923dc184 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 1.5E-37 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 BEN78_08715 bd024ab0162ec144cba6326d923dc184 108 PRINTS PR00421 Thioredoxin family signature 72 83 2.4E-8 T 13-10-2018 BEN78_08715 bd024ab0162ec144cba6326d923dc184 108 PRINTS PR00421 Thioredoxin family signature 24 32 2.4E-8 T 13-10-2018 BEN78_08715 bd024ab0162ec144cba6326d923dc184 108 PRINTS PR00421 Thioredoxin family signature 32 41 2.4E-8 T 13-10-2018 BEN78_08715 bd024ab0162ec144cba6326d923dc184 108 Gene3D G3DSA:3.40.30.10 1 108 1.9E-34 T 13-10-2018 BEN78_08715 bd024ab0162ec144cba6326d923dc184 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 BEN78_08715 bd024ab0162ec144cba6326d923dc184 108 Pfam PF00085 Thioredoxin 5 106 1.6E-32 T 13-10-2018 IPR013766 Thioredoxin domain GO:0045454 BEN78_08715 bd024ab0162ec144cba6326d923dc184 108 PIRSF PIRSF000077 2 108 4.4E-42 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 BEN78_08715 bd024ab0162ec144cba6326d923dc184 108 SUPERFAMILY SSF52833 3 108 1.61E-40 T 13-10-2018 IPR036249 Thioredoxin-like superfamily BEN78_05235 8f7e26c9e07385150a740c117afa8421 903 Gene3D G3DSA:3.40.50.720 4 130 2.1E-32 T 13-10-2018 BEN78_05235 8f7e26c9e07385150a740c117afa8421 903 SUPERFAMILY SSF52210 295 454 1.01E-34 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BEN78_05235 8f7e26c9e07385150a740c117afa8421 903 SUPERFAMILY SSF55729 740 882 2.4E-20 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN78_05235 8f7e26c9e07385150a740c117afa8421 903 Gene3D G3DSA:3.40.50.261 131 291 2.4E-57 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BEN78_05235 8f7e26c9e07385150a740c117afa8421 903 SMART SM00881 9 104 9.5E-23 T 13-10-2018 IPR003781 CoA-binding GO:0048037 BEN78_05235 8f7e26c9e07385150a740c117afa8421 903 SUPERFAMILY SSF51735 2 139 8.6E-31 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_05235 8f7e26c9e07385150a740c117afa8421 903 SUPERFAMILY SSF56059 496 707 4.36E-30 T 13-10-2018 BEN78_05235 8f7e26c9e07385150a740c117afa8421 903 Gene3D G3DSA:3.30.1490.20 508 588 2.4E-66 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BEN78_05235 8f7e26c9e07385150a740c117afa8421 903 Gene3D G3DSA:3.40.630.30 733 897 4.6E-39 T 13-10-2018 BEN78_05235 8f7e26c9e07385150a740c117afa8421 903 Pfam PF13549 ATP-grasp domain 482 706 1.8E-72 T 13-10-2018 BEN78_05235 8f7e26c9e07385150a740c117afa8421 903 Gene3D G3DSA:3.40.50.261 294 462 1.7E-40 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BEN78_05235 8f7e26c9e07385150a740c117afa8421 903 Pfam PF13302 Acetyltransferase (GNAT) domain 743 877 8.4E-7 T 13-10-2018 IPR000182 GNAT domain BEN78_05235 8f7e26c9e07385150a740c117afa8421 903 SUPERFAMILY SSF52210 130 294 1.96E-42 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BEN78_05235 8f7e26c9e07385150a740c117afa8421 903 Pfam PF13380 CoA binding domain 14 135 1.2E-23 T 13-10-2018 IPR003781 CoA-binding GO:0048037 BEN78_05235 8f7e26c9e07385150a740c117afa8421 903 Gene3D G3DSA:3.30.470.20 493 704 2.4E-66 T 13-10-2018 BEN78_05235 8f7e26c9e07385150a740c117afa8421 903 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 152 289 6.7E-54 T 13-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain BEN78_03620 5b0d12d06a17b0f7172c0c22c115031c 66 SUPERFAMILY SSF69047 1 65 9.55E-22 T 13-10-2018 IPR036629 YjbJ superfamily BEN78_03620 5b0d12d06a17b0f7172c0c22c115031c 66 Gene3D G3DSA:1.10.1470.10 1 65 1.0E-27 T 13-10-2018 IPR036629 YjbJ superfamily BEN78_03620 5b0d12d06a17b0f7172c0c22c115031c 66 PIRSF PIRSF039008 1 66 5.5E-29 T 13-10-2018 IPR026042 Stress response protein YjbJ BEN78_03620 5b0d12d06a17b0f7172c0c22c115031c 66 Pfam PF05532 CsbD-like 4 56 3.0E-16 T 13-10-2018 IPR008462 CsbD-like domain BEN78_08360 cae7541632e2c0c0179845d26468df33 450 SUPERFAMILY SSF56954 1 421 7.59E-92 T 13-10-2018 BEN78_08360 cae7541632e2c0c0179845d26468df33 450 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 21 433 7.0E-114 T 13-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 BEN78_08360 cae7541632e2c0c0179845d26468df33 450 Gene3D G3DSA:1.20.1600.10 22 438 9.0E-113 T 13-10-2018 BEN78_08360 cae7541632e2c0c0179845d26468df33 450 Pfam PF02321 Outer membrane efflux protein 230 418 1.3E-33 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BEN78_08360 cae7541632e2c0c0179845d26468df33 450 Pfam PF02321 Outer membrane efflux protein 26 206 2.5E-23 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BEN78_09545 d694e7aa1c74a646afa178b71d49e994 496 SUPERFAMILY SSF53244 334 488 2.44E-45 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BEN78_09545 d694e7aa1c74a646afa178b71d49e994 496 Pfam PF01225 Mur ligase family, catalytic domain 23 98 2.6E-8 T 13-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 BEN78_09545 d694e7aa1c74a646afa178b71d49e994 496 Pfam PF08245 Mur ligase middle domain 111 313 6.2E-50 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 BEN78_09545 d694e7aa1c74a646afa178b71d49e994 496 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 5 487 33.58 T 13-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 BEN78_09545 d694e7aa1c74a646afa178b71d49e994 496 Gene3D G3DSA:3.90.190.20 343 494 2.3E-54 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BEN78_09545 d694e7aa1c74a646afa178b71d49e994 496 Pfam PF02875 Mur ligase family, glutamate ligase domain 335 419 1.3E-17 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 BEN78_09545 d694e7aa1c74a646afa178b71d49e994 496 SUPERFAMILY SSF63418 5 100 1.57E-17 T 13-10-2018 IPR035911 MurE/MurF, N-terminal BEN78_09545 d694e7aa1c74a646afa178b71d49e994 496 Gene3D G3DSA:3.40.1390.10 5 101 4.7E-18 T 13-10-2018 BEN78_09545 d694e7aa1c74a646afa178b71d49e994 496 SUPERFAMILY SSF53623 102 332 4.58E-74 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BEN78_09545 d694e7aa1c74a646afa178b71d49e994 496 Gene3D G3DSA:3.40.1190.10 102 337 3.1E-81 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BEN78_09545 d694e7aa1c74a646afa178b71d49e994 496 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 21 487 2.4E-149 T 13-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 BEN78_01130 40dc8023366bb51bd3eea8c010589861 362 SUPERFAMILY SSF55120 6 344 3.16E-83 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN78_01130 40dc8023366bb51bd3eea8c010589861 362 Gene3D G3DSA:3.30.2350.20 16 344 4.0E-109 T 13-10-2018 BEN78_01130 40dc8023366bb51bd3eea8c010589861 362 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 4 349 26.818 T 13-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN78_01130 40dc8023366bb51bd3eea8c010589861 362 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 76 89 - T 13-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 BEN78_01130 40dc8023366bb51bd3eea8c010589861 362 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 191 343 1.6E-14 T 13-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN78_01130 40dc8023366bb51bd3eea8c010589861 362 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 15 173 1.4E-37 T 13-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN78_01130 40dc8023366bb51bd3eea8c010589861 362 Gene3D G3DSA:3.30.2340.10 173 308 4.0E-109 T 13-10-2018 BEN78_04720 62bb564a1c46a62fbd42924e5401898a 780 SUPERFAMILY SSF55545 29 167 2.09E-23 T 13-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 BEN78_04720 62bb564a1c46a62fbd42924e5401898a 780 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 38 165 4.5E-23 T 13-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal BEN78_04720 62bb564a1c46a62fbd42924e5401898a 780 PRINTS PR00738 Glycosyl hydrolase family 20 signature 126 146 9.2E-45 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BEN78_04720 62bb564a1c46a62fbd42924e5401898a 780 PRINTS PR00738 Glycosyl hydrolase family 20 signature 162 179 9.2E-45 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BEN78_04720 62bb564a1c46a62fbd42924e5401898a 780 PRINTS PR00738 Glycosyl hydrolase family 20 signature 309 327 9.2E-45 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BEN78_04720 62bb564a1c46a62fbd42924e5401898a 780 PRINTS PR00738 Glycosyl hydrolase family 20 signature 262 279 9.2E-45 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BEN78_04720 62bb564a1c46a62fbd42924e5401898a 780 PRINTS PR00738 Glycosyl hydrolase family 20 signature 191 212 9.2E-45 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BEN78_04720 62bb564a1c46a62fbd42924e5401898a 780 PRINTS PR00738 Glycosyl hydrolase family 20 signature 331 344 9.2E-45 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BEN78_04720 62bb564a1c46a62fbd42924e5401898a 780 PRINTS PR00738 Glycosyl hydrolase family 20 signature 475 491 9.2E-45 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BEN78_04720 62bb564a1c46a62fbd42924e5401898a 780 PRINTS PR00738 Glycosyl hydrolase family 20 signature 493 510 9.2E-45 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BEN78_04720 62bb564a1c46a62fbd42924e5401898a 780 Gene3D G3DSA:3.20.20.80 167 510 2.5E-132 T 13-10-2018 BEN78_04720 62bb564a1c46a62fbd42924e5401898a 780 Gene3D G3DSA:3.30.379.10 20 164 1.4E-28 T 13-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 BEN78_04720 62bb564a1c46a62fbd42924e5401898a 780 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 168 511 1.6E-117 T 13-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 BEN78_04720 62bb564a1c46a62fbd42924e5401898a 780 Pfam PF13290 Chitobiase/beta-hexosaminidase C-terminal domain 567 609 3.7E-7 T 13-10-2018 BEN78_04720 62bb564a1c46a62fbd42924e5401898a 780 SUPERFAMILY SSF51445 168 524 3.75E-122 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily BEN78_11805 00b49c83905d813dfa0f4c25b50f92f5 320 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 98 287 1.3E-48 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BEN78_11805 00b49c83905d813dfa0f4c25b50f92f5 320 Pfam PF02355 Protein export membrane protein 126 296 5.1E-56 T 13-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial BEN78_11805 00b49c83905d813dfa0f4c25b50f92f5 320 Gene3D G3DSA:1.20.1640.10 126 311 7.5E-12 T 13-10-2018 BEN78_11805 00b49c83905d813dfa0f4c25b50f92f5 320 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 15 300 27.538 T 13-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 BEN78_11805 00b49c83905d813dfa0f4c25b50f92f5 320 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 43 290 7.1E-70 T 13-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 BEN78_11805 00b49c83905d813dfa0f4c25b50f92f5 320 Pfam PF07549 SecD/SecF GG Motif 39 64 5.5E-7 T 13-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site BEN78_11805 00b49c83905d813dfa0f4c25b50f92f5 320 PRINTS PR01755 Bacterial translocase SecF protein signature 42 57 1.3E-29 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BEN78_11805 00b49c83905d813dfa0f4c25b50f92f5 320 PRINTS PR01755 Bacterial translocase SecF protein signature 159 173 1.3E-29 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BEN78_11805 00b49c83905d813dfa0f4c25b50f92f5 320 PRINTS PR01755 Bacterial translocase SecF protein signature 238 253 1.3E-29 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BEN78_11805 00b49c83905d813dfa0f4c25b50f92f5 320 PRINTS PR01755 Bacterial translocase SecF protein signature 207 225 1.3E-29 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BEN78_11805 00b49c83905d813dfa0f4c25b50f92f5 320 SUPERFAMILY SSF82866 80 296 1.31E-33 T 13-10-2018 BEN78_12340 0993d896641690c94880d27fac26ae67 1016 Gene3D G3DSA:3.30.190.20 132 241 9.5E-245 T 13-10-2018 BEN78_12340 0993d896641690c94880d27fac26ae67 1016 Gene3D G3DSA:1.20.1580.10 92 494 9.5E-245 T 13-10-2018 BEN78_12340 0993d896641690c94880d27fac26ae67 1016 Gene3D G3DSA:3.40.50.300 8 597 9.5E-245 T 13-10-2018 BEN78_12340 0993d896641690c94880d27fac26ae67 1016 SUPERFAMILY SSF52540 623 914 3.25E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_12340 0993d896641690c94880d27fac26ae67 1016 SUPERFAMILY SSF52540 3 571 1.36E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_12340 0993d896641690c94880d27fac26ae67 1016 ProSitePatterns PS00211 ABC transporters family signature. 831 845 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN78_12340 0993d896641690c94880d27fac26ae67 1016 Gene3D G3DSA:1.20.1580.10 693 831 7.1E-138 T 13-10-2018 BEN78_12340 0993d896641690c94880d27fac26ae67 1016 Pfam PF00005 ABC transporter 625 653 7.3E-5 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_12340 0993d896641690c94880d27fac26ae67 1016 Hamap MF_00205 UvrABC system protein A [uvrA]. 3 941 22.613 T 13-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 BEN78_12340 0993d896641690c94880d27fac26ae67 1016 ProSitePatterns PS00211 ABC transporters family signature. 489 503 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN78_12340 0993d896641690c94880d27fac26ae67 1016 Gene3D G3DSA:3.40.50.300 619 937 7.1E-138 T 13-10-2018 BEN78_12340 0993d896641690c94880d27fac26ae67 1016 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 6 926 0.0 T 13-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 BEN78_12340 0993d896641690c94880d27fac26ae67 1016 Gene3D G3DSA:1.10.8.280 289 405 9.5E-245 T 13-10-2018 BEN78_01880 29b03577ab787ff7b084606ce5ccdeea 394 SUPERFAMILY SSF56322 64 387 4.97E-79 T 13-10-2018 IPR005801 ADC synthase GO:0009058 BEN78_01880 29b03577ab787ff7b084606ce5ccdeea 394 Pfam PF00425 chorismate binding enzyme 116 378 1.5E-66 T 13-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal BEN78_01880 29b03577ab787ff7b084606ce5ccdeea 394 Gene3D G3DSA:3.60.120.10 16 392 2.0E-103 T 13-10-2018 IPR005801 ADC synthase GO:0009058 BEN78_01880 29b03577ab787ff7b084606ce5ccdeea 394 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 111 385 5.4E-77 T 13-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 BEN78_04070 af21de395e914ad1831e4871a9616bd0 466 Gene3D G3DSA:2.40.10.170 1 73 8.1E-28 T 13-10-2018 BEN78_04070 af21de395e914ad1831e4871a9616bd0 466 Gene3D G3DSA:1.10.1140.10 349 466 2.4E-60 T 13-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BEN78_04070 af21de395e914ad1831e4871a9616bd0 466 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 464 56.506 T 13-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 BEN78_04070 af21de395e914ad1831e4871a9616bd0 466 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 464 2.6E-252 T 13-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 BEN78_04070 af21de395e914ad1831e4871a9616bd0 466 SUPERFAMILY SSF52540 75 351 1.94E-89 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_04070 af21de395e914ad1831e4871a9616bd0 466 SUPERFAMILY SSF50615 1 72 3.4E-24 T 13-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BEN78_04070 af21de395e914ad1831e4871a9616bd0 466 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 128 346 1.1E-61 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BEN78_04070 af21de395e914ad1831e4871a9616bd0 466 SMART SM00382 140 331 0.0016 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_04070 af21de395e914ad1831e4871a9616bd0 466 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 71 2.4E-17 T 13-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BEN78_04070 af21de395e914ad1831e4871a9616bd0 466 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 337 346 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BEN78_04070 af21de395e914ad1831e4871a9616bd0 466 Gene3D G3DSA:3.40.50.300 74 348 3.1E-110 T 13-10-2018 BEN78_04070 af21de395e914ad1831e4871a9616bd0 466 SUPERFAMILY SSF47917 349 464 2.88E-54 T 13-10-2018 BEN78_06010 a84fb64b5fa16efc42e86f9241ed1058 482 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 84 6.6E-15 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN78_06010 a84fb64b5fa16efc42e86f9241ed1058 482 Gene3D G3DSA:3.40.640.10 143 361 1.3E-71 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN78_06010 a84fb64b5fa16efc42e86f9241ed1058 482 SUPERFAMILY SSF46785 15 86 2.1E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_06010 a84fb64b5fa16efc42e86f9241ed1058 482 Gene3D G3DSA:1.10.10.10 16 85 4.3E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_06010 a84fb64b5fa16efc42e86f9241ed1058 482 SUPERFAMILY SSF53383 119 461 9.39E-70 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_06010 a84fb64b5fa16efc42e86f9241ed1058 482 SMART SM00345 26 85 1.8E-13 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN78_06010 a84fb64b5fa16efc42e86f9241ed1058 482 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 59 75 4.5E-6 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN78_06010 a84fb64b5fa16efc42e86f9241ed1058 482 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 59 4.5E-6 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN78_06010 a84fb64b5fa16efc42e86f9241ed1058 482 Gene3D G3DSA:3.90.1150.10 362 459 1.3E-71 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN78_06010 a84fb64b5fa16efc42e86f9241ed1058 482 Pfam PF00155 Aminotransferase class I and II 142 456 6.5E-28 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BEN78_13850 e64e03dcafc16bef27b1cf5046da6f42 227 Pfam PF00035 Double-stranded RNA binding motif 156 217 8.2E-11 T 13-10-2018 IPR014720 Double-stranded RNA-binding domain BEN78_13850 e64e03dcafc16bef27b1cf5046da6f42 227 Hamap MF_00104 Ribonuclease 3 [rnc]. 5 220 28.733 T 13-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 BEN78_13850 e64e03dcafc16bef27b1cf5046da6f42 227 SUPERFAMILY SSF54768 109 223 1.1E-23 T 13-10-2018 BEN78_13850 e64e03dcafc16bef27b1cf5046da6f42 227 SMART SM00535 21 149 8.3E-49 T 13-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 BEN78_13850 e64e03dcafc16bef27b1cf5046da6f42 227 SUPERFAMILY SSF69065 12 158 1.66E-43 T 13-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 BEN78_13850 e64e03dcafc16bef27b1cf5046da6f42 227 Gene3D G3DSA:3.30.160.20 154 225 1.2E-19 T 13-10-2018 BEN78_13850 e64e03dcafc16bef27b1cf5046da6f42 227 ProSitePatterns PS00517 Ribonuclease III family signature. 38 46 - T 13-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 BEN78_13850 e64e03dcafc16bef27b1cf5046da6f42 227 SMART SM00358 156 224 5.4E-19 T 13-10-2018 IPR014720 Double-stranded RNA-binding domain BEN78_13850 e64e03dcafc16bef27b1cf5046da6f42 227 Gene3D G3DSA:1.10.1520.10 10 147 1.6E-39 T 13-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 BEN78_13850 e64e03dcafc16bef27b1cf5046da6f42 227 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 14 220 2.0E-70 T 13-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 BEN78_13850 e64e03dcafc16bef27b1cf5046da6f42 227 Pfam PF14622 Ribonuclease-III-like 19 137 1.5E-32 T 13-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 BEN78_11070 566b93f6046552475a68a67ad36e6df5 697 SMART SM00889 487 605 9.4E-76 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 BEN78_11070 566b93f6046552475a68a67ad36e6df5 697 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 7.3E-65 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN78_11070 566b93f6046552475a68a67ad36e6df5 697 Pfam PF03144 Elongation factor Tu domain 2 331 398 1.0E-18 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 BEN78_11070 566b93f6046552475a68a67ad36e6df5 697 Gene3D G3DSA:3.30.70.870 412 487 4.3E-34 T 13-10-2018 BEN78_11070 566b93f6046552475a68a67ad36e6df5 697 SMART SM00838 607 694 1.2E-54 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like BEN78_11070 566b93f6046552475a68a67ad36e6df5 697 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site BEN78_11070 566b93f6046552475a68a67ad36e6df5 697 Gene3D G3DSA:3.40.50.300 1 298 1.0E-113 T 13-10-2018 BEN78_11070 566b93f6046552475a68a67ad36e6df5 697 Gene3D G3DSA:3.30.70.240 611 681 1.4E-91 T 13-10-2018 BEN78_11070 566b93f6046552475a68a67ad36e6df5 697 Pfam PF00679 Elongation factor G C-terminus 607 693 8.8E-29 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like BEN78_11070 566b93f6046552475a68a67ad36e6df5 697 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 112.634 T 13-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BEN78_11070 566b93f6046552475a68a67ad36e6df5 697 SUPERFAMILY SSF54980 411 488 6.47E-26 T 13-10-2018 IPR035647 EF-G domain III/V-like BEN78_11070 566b93f6046552475a68a67ad36e6df5 697 Pfam PF14492 Elongation Factor G, domain II 411 485 4.3E-35 T 13-10-2018 BEN78_11070 566b93f6046552475a68a67ad36e6df5 697 SUPERFAMILY SSF52540 6 288 1.4E-105 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_11070 566b93f6046552475a68a67ad36e6df5 697 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.0E-16 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN78_11070 566b93f6046552475a68a67ad36e6df5 697 PRINTS PR00315 GTP-binding elongation factor signature 85 95 4.0E-16 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN78_11070 566b93f6046552475a68a67ad36e6df5 697 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.0E-16 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN78_11070 566b93f6046552475a68a67ad36e6df5 697 PRINTS PR00315 GTP-binding elongation factor signature 137 146 4.0E-16 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN78_11070 566b93f6046552475a68a67ad36e6df5 697 PRINTS PR00315 GTP-binding elongation factor signature 101 112 4.0E-16 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN78_11070 566b93f6046552475a68a67ad36e6df5 697 Gene3D G3DSA:2.40.30.10 299 407 4.3E-46 T 13-10-2018 BEN78_11070 566b93f6046552475a68a67ad36e6df5 697 SUPERFAMILY SSF54980 610 696 3.21E-28 T 13-10-2018 IPR035647 EF-G domain III/V-like BEN78_11070 566b93f6046552475a68a67ad36e6df5 697 Gene3D G3DSA:3.30.230.10 491 694 1.4E-91 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BEN78_11070 566b93f6046552475a68a67ad36e6df5 697 SUPERFAMILY SSF54211 486 606 8.34E-46 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BEN78_11070 566b93f6046552475a68a67ad36e6df5 697 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 697 0.0 T 13-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BEN78_11070 566b93f6046552475a68a67ad36e6df5 697 Pfam PF03764 Elongation factor G, domain IV 486 605 4.8E-49 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 BEN78_11070 566b93f6046552475a68a67ad36e6df5 697 SUPERFAMILY SSF50447 255 409 7.07E-36 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BEN78_11070 566b93f6046552475a68a67ad36e6df5 697 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 186 1.7E-31 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BEN78_02930 f20073f803c4936e5c4608113fe0be61 177 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 28 171 8.5E-23 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BEN78_02930 f20073f803c4936e5c4608113fe0be61 177 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 16 174 7.5E-45 T 13-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 BEN78_02930 f20073f803c4936e5c4608113fe0be61 177 Gene3D G3DSA:3.10.180.10 3 175 4.0E-61 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN78_02930 f20073f803c4936e5c4608113fe0be61 177 SUPERFAMILY SSF54593 26 176 2.06E-34 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN78_02930 f20073f803c4936e5c4608113fe0be61 177 ProSitePatterns PS00935 Glyoxalase I signature 2. 115 131 - T 13-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 BEN78_02930 f20073f803c4936e5c4608113fe0be61 177 ProSitePatterns PS00934 Glyoxalase I signature 1. 30 51 - T 13-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 BEN78_02905 47a66826d7837470ff79bf1214337163 861 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 13-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 BEN78_02905 47a66826d7837470ff79bf1214337163 861 Gene3D G3DSA:3.40.50.300 148 342 5.9E-74 T 13-10-2018 BEN78_02905 47a66826d7837470ff79bf1214337163 861 SMART SM00382 198 343 1.7E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_02905 47a66826d7837470ff79bf1214337163 861 SMART SM00382 597 770 1.7E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_02905 47a66826d7837470ff79bf1214337163 861 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 336 1.6E-13 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BEN78_02905 47a66826d7837470ff79bf1214337163 861 SMART SM01086 769 858 1.5E-36 T 13-10-2018 IPR019489 Clp ATPase, C-terminal BEN78_02905 47a66826d7837470ff79bf1214337163 861 SUPERFAMILY SSF52540 159 545 4.27E-100 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_02905 47a66826d7837470ff79bf1214337163 861 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 769 849 2.7E-25 T 13-10-2018 IPR019489 Clp ATPase, C-terminal BEN78_02905 47a66826d7837470ff79bf1214337163 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 6.0E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 BEN78_02905 47a66826d7837470ff79bf1214337163 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 6.0E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 BEN78_02905 47a66826d7837470ff79bf1214337163 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 6.0E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 BEN78_02905 47a66826d7837470ff79bf1214337163 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 6.0E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 BEN78_02905 47a66826d7837470ff79bf1214337163 861 Gene3D G3DSA:1.10.8.60 769 861 1.4E-27 T 13-10-2018 BEN78_02905 47a66826d7837470ff79bf1214337163 861 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 1.1E-13 T 13-10-2018 IPR004176 Clp, N-terminal BEN78_02905 47a66826d7837470ff79bf1214337163 861 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 145 2.1E-11 T 13-10-2018 IPR004176 Clp, N-terminal BEN78_02905 47a66826d7837470ff79bf1214337163 861 Gene3D G3DSA:3.40.50.300 343 544 3.3E-71 T 13-10-2018 BEN78_02905 47a66826d7837470ff79bf1214337163 861 SUPERFAMILY SSF81923 4 156 1.47E-40 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 BEN78_02905 47a66826d7837470ff79bf1214337163 861 Gene3D G3DSA:3.40.50.300 550 767 6.7E-88 T 13-10-2018 BEN78_02905 47a66826d7837470ff79bf1214337163 861 SUPERFAMILY SSF52540 546 851 1.0E-81 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_02905 47a66826d7837470ff79bf1214337163 861 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 763 7.1E-56 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BEN78_02905 47a66826d7837470ff79bf1214337163 861 Gene3D G3DSA:1.10.1780.10 1 147 1.6E-32 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 BEN78_02905 47a66826d7837470ff79bf1214337163 861 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 13-10-2018 IPR028299 ClpA/B, conserved site 2 BEN78_02905 47a66826d7837470ff79bf1214337163 861 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 858 0.0 T 13-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 BEN78_11700 44e12f532c64eabc26e15c9500721f36 676 Pfam PF04851 Type III restriction enzyme, res subunit 21 127 6.0E-10 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 BEN78_11700 44e12f532c64eabc26e15c9500721f36 676 Gene3D G3DSA:3.40.50.300 420 594 1.7E-48 T 13-10-2018 BEN78_11700 44e12f532c64eabc26e15c9500721f36 676 Hamap MF_00204 UvrABC system protein B [uvrB]. 8 673 42.787 T 13-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 BEN78_11700 44e12f532c64eabc26e15c9500721f36 676 Gene3D G3DSA:3.40.50.300 274 419 1.2E-51 T 13-10-2018 BEN78_11700 44e12f532c64eabc26e15c9500721f36 676 Pfam PF00271 Helicase conserved C-terminal domain 446 549 1.0E-16 T 13-10-2018 IPR001650 Helicase, C-terminal BEN78_11700 44e12f532c64eabc26e15c9500721f36 676 Gene3D G3DSA:4.10.860.10 619 676 2.4E-15 T 13-10-2018 BEN78_11700 44e12f532c64eabc26e15c9500721f36 676 Gene3D G3DSA:3.40.50.300 2 247 3.5E-73 T 13-10-2018 BEN78_11700 44e12f532c64eabc26e15c9500721f36 676 SUPERFAMILY SSF52540 42 584 8.83E-36 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_11700 44e12f532c64eabc26e15c9500721f36 676 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 10 671 0.0 T 13-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 BEN78_11700 44e12f532c64eabc26e15c9500721f36 676 Pfam PF12344 Ultra-violet resistance protein B 557 598 2.4E-21 T 13-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain BEN78_11700 44e12f532c64eabc26e15c9500721f36 676 SUPERFAMILY SSF52540 9 420 7.42E-136 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_11700 44e12f532c64eabc26e15c9500721f36 676 SMART SM00490 465 551 4.3E-19 T 13-10-2018 IPR001650 Helicase, C-terminal BEN78_11700 44e12f532c64eabc26e15c9500721f36 676 SMART SM00487 14 431 6.4E-29 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN78_11700 44e12f532c64eabc26e15c9500721f36 676 Pfam PF02151 UvrB/uvrC motif 640 672 2.6E-9 T 13-10-2018 IPR001943 UVR domain GO:0005515 BEN78_11700 44e12f532c64eabc26e15c9500721f36 676 SUPERFAMILY SSF46600 626 673 8.63E-12 T 13-10-2018 IPR036876 UVR domain superfamily BEN78_09720 227e15975f293ea798b356a96c5758cd 465 Gene3D G3DSA:3.40.50.2300 1 130 3.7E-32 T 13-10-2018 BEN78_09720 227e15975f293ea798b356a96c5758cd 465 SUPERFAMILY SSF52172 6 181 2.56E-40 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_09720 227e15975f293ea798b356a96c5758cd 465 SUPERFAMILY SSF46689 351 465 4.26E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN78_09720 227e15975f293ea798b356a96c5758cd 465 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 445 465 9.4E-10 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BEN78_09720 227e15975f293ea798b356a96c5758cd 465 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 428 445 9.4E-10 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BEN78_09720 227e15975f293ea798b356a96c5758cd 465 Pfam PF02954 Bacterial regulatory protein, Fis family 422 462 2.2E-14 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BEN78_09720 227e15975f293ea798b356a96c5758cd 465 Gene3D G3DSA:3.40.50.300 131 307 1.4E-59 T 13-10-2018 BEN78_09720 227e15975f293ea798b356a96c5758cd 465 Gene3D G3DSA:1.10.8.60 308 387 8.7E-22 T 13-10-2018 BEN78_09720 227e15975f293ea798b356a96c5758cd 465 SMART SM00448 5 116 1.7E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_09720 227e15975f293ea798b356a96c5758cd 465 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 350 359 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site BEN78_09720 227e15975f293ea798b356a96c5758cd 465 Pfam PF00158 Sigma-54 interaction domain 137 303 2.5E-67 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BEN78_09720 227e15975f293ea798b356a96c5758cd 465 Gene3D G3DSA:1.10.10.60 404 465 4.5E-16 T 13-10-2018 BEN78_09720 227e15975f293ea798b356a96c5758cd 465 SUPERFAMILY SSF52540 137 379 2.41E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_09720 227e15975f293ea798b356a96c5758cd 465 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BEN78_09720 227e15975f293ea798b356a96c5758cd 465 Pfam PF00072 Response regulator receiver domain 8 115 2.3E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_09720 227e15975f293ea798b356a96c5758cd 465 SMART SM00382 157 300 3.3E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_12765 324ceb255fccedf86b12be97567aea9f 455 Gene3D G3DSA:3.40.50.11540 71 248 3.6E-74 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12765 324ceb255fccedf86b12be97567aea9f 455 SUPERFAMILY SSF140490 343 440 3.27E-35 T 13-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12765 324ceb255fccedf86b12be97567aea9f 455 Pfam PF10531 SLBB domain 261 309 7.8E-14 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12765 324ceb255fccedf86b12be97567aea9f 455 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 349 431 9.3E-29 T 13-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12765 324ceb255fccedf86b12be97567aea9f 455 Gene3D G3DSA:3.10.20.600 250 344 1.8E-32 T 13-10-2018 BEN78_12765 324ceb255fccedf86b12be97567aea9f 455 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 66 237 2.7E-44 T 13-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12765 324ceb255fccedf86b12be97567aea9f 455 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 25 433 1.8E-193 T 13-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12765 324ceb255fccedf86b12be97567aea9f 455 SUPERFAMILY SSF142984 259 342 4.97E-25 T 13-10-2018 BEN78_12765 324ceb255fccedf86b12be97567aea9f 455 SUPERFAMILY SSF142019 24 257 3.01E-80 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12765 324ceb255fccedf86b12be97567aea9f 455 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 185 200 - T 13-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12765 324ceb255fccedf86b12be97567aea9f 455 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 360 371 - T 13-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12765 324ceb255fccedf86b12be97567aea9f 455 SMART SM00928 347 392 2.7E-21 T 13-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12765 324ceb255fccedf86b12be97567aea9f 455 Gene3D G3DSA:1.20.1440.230 345 444 2.3E-32 T 13-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_02865 0541908f93b42b2f7ea4fb1c400bfec8 111 SMART SM00834 1 42 1.5E-19 T 13-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain BEN78_02865 0541908f93b42b2f7ea4fb1c400bfec8 111 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 52 7.5E-22 T 13-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain BEN78_02865 0541908f93b42b2f7ea4fb1c400bfec8 111 Pfam PF09723 Zinc ribbon domain 1 40 2.0E-17 T 13-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain BEN78_12470 1b0224ab666f6738a77e671f14792fec 274 Pfam PF01063 Amino-transferase class IV 30 243 4.4E-26 T 13-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 BEN78_12470 1b0224ab666f6738a77e671f14792fec 274 Gene3D G3DSA:3.20.10.10 124 268 1.7E-22 T 13-10-2018 BEN78_12470 1b0224ab666f6738a77e671f14792fec 274 Gene3D G3DSA:3.30.470.10 9 116 1.3E-5 T 13-10-2018 BEN78_12470 1b0224ab666f6738a77e671f14792fec 274 SUPERFAMILY SSF56752 11 251 1.96E-32 T 13-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 BEN78_03270 b7b158e3660a59a4027a9292dfca1e79 212 SUPERFAMILY SSF100950 3 210 1.21E-74 T 13-10-2018 IPR037171 NagB/RpiA transferase-like BEN78_03270 b7b158e3660a59a4027a9292dfca1e79 212 SMART SM00882 6 202 7.3E-79 T 13-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 BEN78_03270 b7b158e3660a59a4027a9292dfca1e79 212 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 44 52 - T 13-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 BEN78_03270 b7b158e3660a59a4027a9292dfca1e79 212 Gene3D G3DSA:3.40.1080.10 2 212 4.4E-103 T 13-10-2018 BEN78_03270 b7b158e3660a59a4027a9292dfca1e79 212 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 208 4.7E-100 T 13-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 BEN78_03270 b7b158e3660a59a4027a9292dfca1e79 212 Pfam PF01144 Coenzyme A transferase 7 182 7.9E-41 T 13-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 BEN78_06670 76bffc976f0fb4c487b4012b9a1d57ff 389 SUPERFAMILY SSF111369 55 295 2.75E-70 T 13-10-2018 BEN78_06670 76bffc976f0fb4c487b4012b9a1d57ff 389 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 372 7.8E-78 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BEN78_06670 76bffc976f0fb4c487b4012b9a1d57ff 389 Gene3D G3DSA:2.40.30.170 58 280 7.2E-78 T 13-10-2018 BEN78_06670 76bffc976f0fb4c487b4012b9a1d57ff 389 Pfam PF13533 Biotin-lipoyl like 64 113 1.1E-15 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain BEN78_06670 76bffc976f0fb4c487b4012b9a1d57ff 389 Gene3D G3DSA:2.40.420.20 281 374 1.0E-19 T 13-10-2018 BEN78_06670 76bffc976f0fb4c487b4012b9a1d57ff 389 Gene3D G3DSA:1.10.287.470 99 172 7.2E-78 T 13-10-2018 BEN78_06670 76bffc976f0fb4c487b4012b9a1d57ff 389 Gene3D G3DSA:2.40.50.100 64 207 7.2E-78 T 13-10-2018 BEN78_04700 cdd25bba8b990aa88507401877cbe20a 359 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 15 25 5.6E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN78_04700 cdd25bba8b990aa88507401877cbe20a 359 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 5 15 5.6E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN78_04700 cdd25bba8b990aa88507401877cbe20a 359 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 13-10-2018 BEN78_04700 cdd25bba8b990aa88507401877cbe20a 359 Gene3D G3DSA:3.40.50.2300 166 295 6.2E-68 T 13-10-2018 BEN78_04700 cdd25bba8b990aa88507401877cbe20a 359 SMART SM00354 3 73 2.7E-25 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN78_04700 cdd25bba8b990aa88507401877cbe20a 359 Pfam PF13377 Periplasmic binding protein-like domain 174 340 3.8E-36 T 13-10-2018 BEN78_04700 cdd25bba8b990aa88507401877cbe20a 359 Gene3D G3DSA:1.10.260.40 1 57 2.8E-22 T 13-10-2018 BEN78_04700 cdd25bba8b990aa88507401877cbe20a 359 SUPERFAMILY SSF47413 2 61 7.97E-17 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN78_04700 cdd25bba8b990aa88507401877cbe20a 359 Gene3D G3DSA:3.40.50.2300 58 311 6.2E-68 T 13-10-2018 BEN78_04700 cdd25bba8b990aa88507401877cbe20a 359 SUPERFAMILY SSF53822 64 343 7.07E-63 T 13-10-2018 IPR028082 Periplasmic binding protein-like I BEN78_04700 cdd25bba8b990aa88507401877cbe20a 359 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 1.4E-18 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN78_01125 49082f14d9f0c14ece3057d7e3073751 216 Pfam PF01726 LexA DNA binding domain 2 64 2.7E-18 T 13-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 BEN78_01125 49082f14d9f0c14ece3057d7e3073751 216 SUPERFAMILY SSF51306 87 213 2.44E-31 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily BEN78_01125 49082f14d9f0c14ece3057d7e3073751 216 TIGRFAM TIGR00498 lexA: repressor LexA 2 214 8.6E-50 T 13-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 BEN78_01125 49082f14d9f0c14ece3057d7e3073751 216 Pfam PF00717 Peptidase S24-like 131 196 2.1E-14 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C BEN78_01125 49082f14d9f0c14ece3057d7e3073751 216 Hamap MF_00015 LexA repressor [lexA]. 2 215 29.446 T 13-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 BEN78_01125 49082f14d9f0c14ece3057d7e3073751 216 SUPERFAMILY SSF46785 1 67 4.82E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_01125 49082f14d9f0c14ece3057d7e3073751 216 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 167 179 1.3E-7 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 BEN78_01125 49082f14d9f0c14ece3057d7e3073751 216 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 139 150 1.3E-7 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 BEN78_01125 49082f14d9f0c14ece3057d7e3073751 216 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 128 138 1.3E-7 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 BEN78_01125 49082f14d9f0c14ece3057d7e3073751 216 Gene3D G3DSA:2.10.109.10 92 215 7.7E-33 T 13-10-2018 BEN78_01125 49082f14d9f0c14ece3057d7e3073751 216 Gene3D G3DSA:1.10.10.10 1 68 1.9E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_13190 b17ed1c020a99d185932d6c5a5709d65 252 Gene3D G3DSA:3.60.15.10 3 241 2.1E-24 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN78_13190 b17ed1c020a99d185932d6c5a5709d65 252 Pfam PF12706 Beta-lactamase superfamily domain 32 190 9.1E-13 T 13-10-2018 IPR001279 Metallo-beta-lactamase BEN78_13190 b17ed1c020a99d185932d6c5a5709d65 252 SUPERFAMILY SSF56281 5 222 8.12E-27 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN78_10825 494d4101484f605ae6248d6571cd1c40 130 Pfam PF03610 PTS system fructose IIA component 4 104 6.0E-13 T 13-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 BEN78_10825 494d4101484f605ae6248d6571cd1c40 130 Gene3D G3DSA:3.40.50.510 2 130 5.1E-22 T 13-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 BEN78_10825 494d4101484f605ae6248d6571cd1c40 130 SUPERFAMILY SSF53062 3 126 2.09E-21 T 13-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 BEN78_11170 614ad0e75423f4c7064d3280b20e3920 179 Gene3D G3DSA:3.30.230.10 86 178 7.7E-36 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BEN78_11170 614ad0e75423f4c7064d3280b20e3920 179 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 23 175 4.3E-64 T 13-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 BEN78_11170 614ad0e75423f4c7064d3280b20e3920 179 Pfam PF03719 Ribosomal protein S5, C-terminal domain 100 169 2.8E-29 T 13-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 BEN78_11170 614ad0e75423f4c7064d3280b20e3920 179 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 175 34.229 T 13-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 BEN78_11170 614ad0e75423f4c7064d3280b20e3920 179 Gene3D G3DSA:3.30.160.20 14 83 2.9E-28 T 13-10-2018 BEN78_11170 614ad0e75423f4c7064d3280b20e3920 179 ProSitePatterns PS00585 Ribosomal protein S5 signature. 40 72 - T 13-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site BEN78_11170 614ad0e75423f4c7064d3280b20e3920 179 Pfam PF00333 Ribosomal protein S5, N-terminal domain 25 85 3.0E-25 T 13-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 BEN78_11170 614ad0e75423f4c7064d3280b20e3920 179 SUPERFAMILY SSF54768 19 87 5.65E-21 T 13-10-2018 BEN78_11170 614ad0e75423f4c7064d3280b20e3920 179 SUPERFAMILY SSF54211 91 171 4.55E-26 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BEN78_02115 051ed5cf3f643112b46a4f86c5420076 168 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 168 2.0E-50 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 BEN78_02115 051ed5cf3f643112b46a4f86c5420076 168 Gene3D G3DSA:2.40.50.140 1 117 8.6E-44 T 13-10-2018 BEN78_02115 051ed5cf3f643112b46a4f86c5420076 168 SUPERFAMILY SSF50249 3 168 5.83E-56 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN78_02115 051ed5cf3f643112b46a4f86c5420076 168 Pfam PF00436 Single-strand binding protein family 5 108 1.3E-38 T 13-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 BEN78_02115 051ed5cf3f643112b46a4f86c5420076 168 Hamap MF_00984 Single-stranded DNA-binding protein. 5 112 35.903 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 BEN78_02375 f0d77e8eadacfbae333ef10a60460fa0 410 SUPERFAMILY SSF51445 50 146 3.2E-5 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily BEN78_02375 f0d77e8eadacfbae333ef10a60460fa0 410 Gene3D G3DSA:3.20.20.80 27 258 8.8E-9 T 13-10-2018 BEN78_04800 bc38acae6edc2ad85a0372eb5eeb7010 147 Pfam PF09424 Yqey-like protein 4 146 9.7E-54 T 13-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 BEN78_04800 bc38acae6edc2ad85a0372eb5eeb7010 147 Gene3D G3DSA:1.10.10.410 91 147 1.9E-17 T 13-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal BEN78_04800 bc38acae6edc2ad85a0372eb5eeb7010 147 SUPERFAMILY SSF89095 1 146 2.88E-42 T 13-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 BEN78_04800 bc38acae6edc2ad85a0372eb5eeb7010 147 Gene3D G3DSA:1.10.1510.10 1 90 7.8E-30 T 13-10-2018 BEN78_14395 6b961da30aec6442a7a5e188abadca31 752 SMART SM00304 395 447 19.0 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BEN78_14395 6b961da30aec6442a7a5e188abadca31 752 SMART SM00304 214 266 1.8E-9 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BEN78_14395 6b961da30aec6442a7a5e188abadca31 752 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 174 9.2E-24 T 13-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain BEN78_14395 6b961da30aec6442a7a5e188abadca31 752 Gene3D G3DSA:1.10.287.950 395 697 1.9E-82 T 13-10-2018 BEN78_14395 6b961da30aec6442a7a5e188abadca31 752 SMART SM00283 448 695 4.4E-89 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BEN78_14395 6b961da30aec6442a7a5e188abadca31 752 SUPERFAMILY SSF158472 214 265 5.75E-8 T 13-10-2018 BEN78_14395 6b961da30aec6442a7a5e188abadca31 752 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 507 662 9.0E-52 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BEN78_14395 6b961da30aec6442a7a5e188abadca31 752 SUPERFAMILY SSF58104 415 699 3.4E-70 T 13-10-2018 BEN78_14395 6b961da30aec6442a7a5e188abadca31 752 Gene3D G3DSA:1.20.120.1530 206 352 7.0E-39 T 13-10-2018 BEN78_14395 6b961da30aec6442a7a5e188abadca31 752 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 546 573 4.6E-56 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BEN78_14395 6b961da30aec6442a7a5e188abadca31 752 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 623 652 4.6E-56 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BEN78_14395 6b961da30aec6442a7a5e188abadca31 752 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 469 498 4.6E-56 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BEN78_14395 6b961da30aec6442a7a5e188abadca31 752 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 575 604 4.6E-56 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BEN78_14395 6b961da30aec6442a7a5e188abadca31 752 Pfam PF00672 HAMP domain 214 262 6.7E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BEN78_13340 ded7dae4cae2bdfb04ae0bf302930620 553 Gene3D G3DSA:1.50.10.140 59 502 2.0E-162 T 13-10-2018 BEN78_13340 ded7dae4cae2bdfb04ae0bf302930620 553 PIRSF PIRSF028431 14 507 3.7E-187 T 13-10-2018 IPR016883 Uncharacterised conserved protein UCP028431 BEN78_13340 ded7dae4cae2bdfb04ae0bf302930620 553 Pfam PF10091 Putative glucoamylase 234 482 1.7E-87 T 13-10-2018 IPR019282 Domain of unknown function DUF2329 BEN78_13480 e3854565fb592b88fba34faa80d7f244 352 Gene3D G3DSA:1.20.120.420 10 152 5.3E-41 T 13-10-2018 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 BEN78_13480 e3854565fb592b88fba34faa80d7f244 352 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 41 340 1.1E-110 T 13-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 BEN78_13480 e3854565fb592b88fba34faa80d7f244 352 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 16 340 1.7E-137 T 13-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 BEN78_13480 e3854565fb592b88fba34faa80d7f244 352 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 13 351 39.132 T 13-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 BEN78_13480 e3854565fb592b88fba34faa80d7f244 352 SUPERFAMILY SSF100950 11 342 1.84E-113 T 13-10-2018 IPR037171 NagB/RpiA transferase-like BEN78_13480 e3854565fb592b88fba34faa80d7f244 352 Pfam PF01008 Initiation factor 2 subunit family 56 340 1.0E-75 T 13-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 BEN78_13480 e3854565fb592b88fba34faa80d7f244 352 Gene3D G3DSA:3.40.50.10470 153 351 3.8E-65 T 13-10-2018 BEN78_12670 e0af5e636364fbf834cae7d2a74a0b5f 342 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 144 325 2.3E-58 T 13-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BEN78_12670 e0af5e636364fbf834cae7d2a74a0b5f 342 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 10 339 2.8E-137 T 13-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BEN78_12670 e0af5e636364fbf834cae7d2a74a0b5f 342 SUPERFAMILY SSF55347 134 326 1.93E-75 T 13-10-2018 BEN78_12670 e0af5e636364fbf834cae7d2a74a0b5f 342 SMART SM00859 10 125 2.7E-46 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 BEN78_12670 e0af5e636364fbf834cae7d2a74a0b5f 342 SUPERFAMILY SSF51735 9 162 1.18E-50 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_12670 e0af5e636364fbf834cae7d2a74a0b5f 342 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 8 339 37.529 T 13-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BEN78_12670 e0af5e636364fbf834cae7d2a74a0b5f 342 Gene3D G3DSA:3.30.360.10 133 322 3.0E-147 T 13-10-2018 BEN78_12670 e0af5e636364fbf834cae7d2a74a0b5f 342 PIRSF PIRSF000148 8 342 3.5E-133 T 13-10-2018 BEN78_12670 e0af5e636364fbf834cae7d2a74a0b5f 342 Gene3D G3DSA:3.40.50.720 11 337 3.0E-147 T 13-10-2018 BEN78_12670 e0af5e636364fbf834cae7d2a74a0b5f 342 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 10 123 7.0E-33 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 BEN78_03880 3b76bd74826ecaafa23832669e86a507 465 SUPERFAMILY SSF51905 8 225 1.29E-21 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_03880 3b76bd74826ecaafa23832669e86a507 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 9.2E-10 T 13-10-2018 BEN78_03880 3b76bd74826ecaafa23832669e86a507 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 150 168 9.2E-10 T 13-10-2018 BEN78_03880 3b76bd74826ecaafa23832669e86a507 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 193 211 9.2E-10 T 13-10-2018 BEN78_03880 3b76bd74826ecaafa23832669e86a507 465 Pfam PF13454 FAD-NAD(P)-binding 12 158 3.1E-31 T 13-10-2018 IPR038732 FAD-dependent urate hydroxylase HpyO, FAD/NAD(P)-binding domain BEN78_03880 3b76bd74826ecaafa23832669e86a507 465 SUPERFAMILY SSF51905 191 427 4.96E-6 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_03880 3b76bd74826ecaafa23832669e86a507 465 Gene3D G3DSA:3.50.50.60 6 52 3.2E-5 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_10970 68ee7746619665f5e4a200454127868e 319 SUPERFAMILY SSF53271 72 307 1.78E-61 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like BEN78_10970 68ee7746619665f5e4a200454127868e 319 Gene3D G3DSA:3.40.50.2020 151 294 5.3E-125 T 13-10-2018 BEN78_10970 68ee7746619665f5e4a200454127868e 319 Pfam PF14572 Phosphoribosyl synthetase-associated domain 208 317 3.0E-30 T 13-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 BEN78_10970 68ee7746619665f5e4a200454127868e 319 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 132 147 - T 13-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 BEN78_10970 68ee7746619665f5e4a200454127868e 319 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 8 124 4.2E-44 T 13-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 BEN78_10970 68ee7746619665f5e4a200454127868e 319 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 8 317 4.6E-115 T 13-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 BEN78_10970 68ee7746619665f5e4a200454127868e 319 SMART SM01400 7 124 4.9E-67 T 13-10-2018 BEN78_10970 68ee7746619665f5e4a200454127868e 319 Gene3D G3DSA:3.40.50.2020 10 306 5.3E-125 T 13-10-2018 BEN78_10970 68ee7746619665f5e4a200454127868e 319 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 7 318 48.194 T 13-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 BEN78_12840 ec12461e0ac9f6d297c4a8110faef652 207 Gene3D G3DSA:3.30.300.70 59 97 7.0E-12 T 13-10-2018 IPR035956 RimP, N-terminal domain superfamily BEN78_12840 ec12461e0ac9f6d297c4a8110faef652 207 Pfam PF02576 RimP N-terminal domain 12 100 1.3E-24 T 13-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal BEN78_12840 ec12461e0ac9f6d297c4a8110faef652 207 Pfam PF17384 RimP C-terminal SH3 domain 103 168 3.4E-22 T 13-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal BEN78_12840 ec12461e0ac9f6d297c4a8110faef652 207 SUPERFAMILY SSF75420 5 100 4.58E-18 T 13-10-2018 IPR035956 RimP, N-terminal domain superfamily BEN78_12840 ec12461e0ac9f6d297c4a8110faef652 207 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 168 24.174 T 13-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 BEN78_12840 ec12461e0ac9f6d297c4a8110faef652 207 SUPERFAMILY SSF74942 101 168 1.29E-15 T 13-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily BEN78_13280 5001ba7226d00727255b4c0d838e8bba 114 PRINTS PR00332 Histidine triad family signature 92 102 8.7E-19 T 13-10-2018 IPR001310 Histidine triad (HIT) protein BEN78_13280 5001ba7226d00727255b4c0d838e8bba 114 PRINTS PR00332 Histidine triad family signature 3 19 8.7E-19 T 13-10-2018 IPR001310 Histidine triad (HIT) protein BEN78_13280 5001ba7226d00727255b4c0d838e8bba 114 PRINTS PR00332 Histidine triad family signature 24 42 8.7E-19 T 13-10-2018 IPR001310 Histidine triad (HIT) protein BEN78_13280 5001ba7226d00727255b4c0d838e8bba 114 ProSitePatterns PS00892 HIT domain signature. 85 103 - T 13-10-2018 IPR019808 Histidine triad, conserved site BEN78_13280 5001ba7226d00727255b4c0d838e8bba 114 Pfam PF01230 HIT domain 9 104 1.2E-24 T 13-10-2018 IPR001310 Histidine triad (HIT) protein BEN78_13280 5001ba7226d00727255b4c0d838e8bba 114 SUPERFAMILY SSF54197 2 105 1.27E-31 T 13-10-2018 IPR036265 HIT-like superfamily BEN78_13280 5001ba7226d00727255b4c0d838e8bba 114 Gene3D G3DSA:3.30.428.10 1 108 1.4E-31 T 13-10-2018 IPR036265 HIT-like superfamily BEN78_10625 daae31cc5ab449ec8c611d14c604ceb0 460 SUPERFAMILY SSF143548 17 159 9.94E-45 T 13-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 BEN78_10625 daae31cc5ab449ec8c611d14c604ceb0 460 Pfam PF03313 Serine dehydratase alpha chain 189 454 1.2E-101 T 13-10-2018 IPR005130 Serine dehydratase-like, alpha subunit BEN78_10625 daae31cc5ab449ec8c611d14c604ceb0 460 Gene3D G3DSA:3.30.1330.90 11 162 3.0E-54 T 13-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 BEN78_10625 daae31cc5ab449ec8c611d14c604ceb0 460 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 457 4.0E-213 T 13-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 BEN78_10625 daae31cc5ab449ec8c611d14c604ceb0 460 Pfam PF03315 Serine dehydratase beta chain 4 158 1.5E-57 T 13-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 BEN78_00580 9430c23c67791d7ff1cfc8cfb49d332e 100 SUPERFAMILY SSF47729 1 94 3.68E-29 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 BEN78_00580 9430c23c67791d7ff1cfc8cfb49d332e 100 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 2.0E-18 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BEN78_00580 9430c23c67791d7ff1cfc8cfb49d332e 100 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 2.0E-18 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BEN78_00580 9430c23c67791d7ff1cfc8cfb49d332e 100 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 2.0E-18 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BEN78_00580 9430c23c67791d7ff1cfc8cfb49d332e 100 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 28.261 T 13-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 BEN78_00580 9430c23c67791d7ff1cfc8cfb49d332e 100 SMART SM00411 1 91 8.6E-39 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BEN78_00580 9430c23c67791d7ff1cfc8cfb49d332e 100 Gene3D G3DSA:4.10.520.10 2 38 4.2E-5 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 BEN78_00580 9430c23c67791d7ff1cfc8cfb49d332e 100 Gene3D G3DSA:4.10.520.10 40 90 5.7E-25 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 BEN78_00580 9430c23c67791d7ff1cfc8cfb49d332e 100 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 13-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 BEN78_00580 9430c23c67791d7ff1cfc8cfb49d332e 100 Pfam PF00216 Bacterial DNA-binding protein 1 90 7.0E-28 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BEN78_00580 9430c23c67791d7ff1cfc8cfb49d332e 100 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 92 9.1E-43 T 13-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 BEN78_00410 157e807f54a7a230a9566f0e179dae8f 229 SUPERFAMILY SSF46894 126 226 3.97E-30 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BEN78_00410 157e807f54a7a230a9566f0e179dae8f 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 1.7E-26 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN78_00410 157e807f54a7a230a9566f0e179dae8f 229 Gene3D G3DSA:1.10.10.10 129 228 2.0E-36 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_00410 157e807f54a7a230a9566f0e179dae8f 229 Gene3D G3DSA:3.40.50.2300 1 128 2.0E-38 T 13-10-2018 BEN78_00410 157e807f54a7a230a9566f0e179dae8f 229 Pfam PF00072 Response regulator receiver domain 5 117 1.5E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_00410 157e807f54a7a230a9566f0e179dae8f 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 9.8E-112 T 13-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 BEN78_00410 157e807f54a7a230a9566f0e179dae8f 229 SMART SM00862 150 225 1.0E-28 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN78_00410 157e807f54a7a230a9566f0e179dae8f 229 SMART SM00448 3 116 1.5E-40 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_00410 157e807f54a7a230a9566f0e179dae8f 229 SUPERFAMILY SSF52172 2 124 2.28E-42 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_05060 35239a057dee6d474e36c4744d7bd318 487 Gene3D G3DSA:3.90.226.10 236 410 4.6E-88 T 13-10-2018 BEN78_05060 35239a057dee6d474e36c4744d7bd318 487 Pfam PF13180 PDZ domain 149 227 1.5E-10 T 13-10-2018 IPR001478 PDZ domain GO:0005515 BEN78_05060 35239a057dee6d474e36c4744d7bd318 487 SMART SM00245 221 413 7.0E-61 T 13-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 BEN78_05060 35239a057dee6d474e36c4744d7bd318 487 Gene3D G3DSA:2.30.42.10 148 235 4.6E-88 T 13-10-2018 BEN78_05060 35239a057dee6d474e36c4744d7bd318 487 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 100 418 4.6E-86 T 13-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 BEN78_05060 35239a057dee6d474e36c4744d7bd318 487 Pfam PF03572 Peptidase family S41 247 411 2.8E-51 T 13-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 BEN78_05060 35239a057dee6d474e36c4744d7bd318 487 SUPERFAMILY SSF50156 148 229 8.94E-14 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 BEN78_05060 35239a057dee6d474e36c4744d7bd318 487 SUPERFAMILY SSF52096 85 417 1.82E-69 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BEN78_05060 35239a057dee6d474e36c4744d7bd318 487 Gene3D G3DSA:3.30.750.44 96 388 4.6E-88 T 13-10-2018 BEN78_05060 35239a057dee6d474e36c4744d7bd318 487 SMART SM00228 148 219 3.7E-7 T 13-10-2018 IPR001478 PDZ domain GO:0005515 BEN78_14290 bcf4229ee643d1105db63598a58faa59 919 Gene3D G3DSA:3.30.499.10 372 612 6.8E-98 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 BEN78_14290 bcf4229ee643d1105db63598a58faa59 919 ProSitePatterns PS01244 Aconitase family signature 2. 515 528 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 BEN78_14290 bcf4229ee643d1105db63598a58faa59 919 Pfam PF00330 Aconitase family (aconitate hydratase) 66 584 8.6E-180 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN78_14290 bcf4229ee643d1105db63598a58faa59 919 SUPERFAMILY SSF53732 3 649 6.28E-228 T 13-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 BEN78_14290 bcf4229ee643d1105db63598a58faa59 919 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 17 913 0.0 T 13-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 BEN78_14290 bcf4229ee643d1105db63598a58faa59 919 Pfam PF00694 Aconitase C-terminal domain 714 843 1.1E-43 T 13-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 BEN78_14290 bcf4229ee643d1105db63598a58faa59 919 PRINTS PR00415 Aconitase family signature 291 304 2.5E-41 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN78_14290 bcf4229ee643d1105db63598a58faa59 919 PRINTS PR00415 Aconitase family signature 371 385 2.5E-41 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN78_14290 bcf4229ee643d1105db63598a58faa59 919 PRINTS PR00415 Aconitase family signature 143 156 2.5E-41 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN78_14290 bcf4229ee643d1105db63598a58faa59 919 PRINTS PR00415 Aconitase family signature 277 290 2.5E-41 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN78_14290 bcf4229ee643d1105db63598a58faa59 919 PRINTS PR00415 Aconitase family signature 453 464 2.5E-41 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN78_14290 bcf4229ee643d1105db63598a58faa59 919 PRINTS PR00415 Aconitase family signature 201 214 2.5E-41 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN78_14290 bcf4229ee643d1105db63598a58faa59 919 PRINTS PR00415 Aconitase family signature 515 528 2.5E-41 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN78_14290 bcf4229ee643d1105db63598a58faa59 919 PRINTS PR00415 Aconitase family signature 167 175 2.5E-41 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN78_14290 bcf4229ee643d1105db63598a58faa59 919 PRINTS PR00415 Aconitase family signature 215 230 2.5E-41 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN78_14290 bcf4229ee643d1105db63598a58faa59 919 Gene3D G3DSA:3.30.499.20 5 371 9.1E-161 T 13-10-2018 BEN78_14290 bcf4229ee643d1105db63598a58faa59 919 Gene3D G3DSA:3.20.19.10 675 915 3.9E-101 T 13-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 BEN78_14290 bcf4229ee643d1105db63598a58faa59 919 SUPERFAMILY SSF52016 653 913 1.82E-83 T 13-10-2018 BEN78_14290 bcf4229ee643d1105db63598a58faa59 919 ProSitePatterns PS00450 Aconitase family signature 1. 449 465 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 BEN78_14290 bcf4229ee643d1105db63598a58faa59 919 Gene3D G3DSA:1.10.1440.20 613 674 2.2E-22 T 13-10-2018 BEN78_13905 d8408a73def3dfc008c34879a1ca94a0 186 SUPERFAMILY SSF53271 10 184 2.88E-47 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like BEN78_13905 d8408a73def3dfc008c34879a1ca94a0 186 Gene3D G3DSA:3.40.50.2020 7 186 7.1E-51 T 13-10-2018 BEN78_13905 d8408a73def3dfc008c34879a1ca94a0 186 Pfam PF00156 Phosphoribosyl transferase domain 23 155 9.4E-21 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 BEN78_03015 707375a9fd614ec9e64e19853dde6147 432 Pfam PF01029 NusB family 7 129 2.5E-16 T 13-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 BEN78_03015 707375a9fd614ec9e64e19853dde6147 432 Gene3D G3DSA:3.30.70.1170 169 226 4.8E-16 T 13-10-2018 BEN78_03015 707375a9fd614ec9e64e19853dde6147 432 SUPERFAMILY SSF53335 134 430 1.12E-68 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_03015 707375a9fd614ec9e64e19853dde6147 432 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 12 430 8.9E-97 T 13-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 BEN78_03015 707375a9fd614ec9e64e19853dde6147 432 Gene3D G3DSA:1.10.940.10 5 136 6.0E-30 T 13-10-2018 IPR035926 NusB-like superfamily BEN78_03015 707375a9fd614ec9e64e19853dde6147 432 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 365 381 8.5E-29 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase BEN78_03015 707375a9fd614ec9e64e19853dde6147 432 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 247 257 8.5E-29 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase BEN78_03015 707375a9fd614ec9e64e19853dde6147 432 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 315 327 8.5E-29 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase BEN78_03015 707375a9fd614ec9e64e19853dde6147 432 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 218 232 8.5E-29 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase BEN78_03015 707375a9fd614ec9e64e19853dde6147 432 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 413 430 8.5E-29 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase BEN78_03015 707375a9fd614ec9e64e19853dde6147 432 Gene3D G3DSA:3.40.50.150 227 431 1.1E-57 T 13-10-2018 BEN78_03015 707375a9fd614ec9e64e19853dde6147 432 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 314 325 - T 13-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 BEN78_03015 707375a9fd614ec9e64e19853dde6147 432 SUPERFAMILY SSF48013 8 134 2.45E-26 T 13-10-2018 IPR035926 NusB-like superfamily BEN78_03015 707375a9fd614ec9e64e19853dde6147 432 Pfam PF01189 16S rRNA methyltransferase RsmB/F 236 429 1.8E-52 T 13-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 BEN78_12600 6c0b6b7e7d953dbf93aec5c34697d3a3 224 Pfam PF01738 Dienelactone hydrolase family 21 221 6.4E-34 T 13-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 BEN78_12600 6c0b6b7e7d953dbf93aec5c34697d3a3 224 Gene3D G3DSA:3.40.50.1820 6 221 1.7E-37 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_12600 6c0b6b7e7d953dbf93aec5c34697d3a3 224 SUPERFAMILY SSF53474 2 220 2.76E-30 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_15330 ec742e8d98b684d82fccee81cd2cde7f 790 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 195 294 1.9E-11 T 13-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BEN78_15330 ec742e8d98b684d82fccee81cd2cde7f 790 Gene3D G3DSA:1.10.1040.10 355 437 5.6E-5 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BEN78_15330 ec742e8d98b684d82fccee81cd2cde7f 790 SUPERFAMILY SSF52096 474 787 1.4E-36 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BEN78_15330 ec742e8d98b684d82fccee81cd2cde7f 790 Pfam PF00378 Enoyl-CoA hydratase/isomerase 487 622 3.2E-13 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 BEN78_15330 ec742e8d98b684d82fccee81cd2cde7f 790 SUPERFAMILY SSF51735 6 193 1.08E-40 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_15330 ec742e8d98b684d82fccee81cd2cde7f 790 Gene3D G3DSA:3.90.226.10 472 689 2.9E-26 T 13-10-2018 BEN78_15330 ec742e8d98b684d82fccee81cd2cde7f 790 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 10 192 7.1E-41 T 13-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BEN78_15330 ec742e8d98b684d82fccee81cd2cde7f 790 SUPERFAMILY SSF48179 193 312 1.45E-20 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BEN78_15330 ec742e8d98b684d82fccee81cd2cde7f 790 SUPERFAMILY SSF48179 345 458 5.7E-18 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BEN78_15330 ec742e8d98b684d82fccee81cd2cde7f 790 Gene3D G3DSA:1.10.1040.10 196 319 4.9E-16 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BEN78_15330 ec742e8d98b684d82fccee81cd2cde7f 790 Gene3D G3DSA:3.40.50.720 1 195 1.3E-54 T 13-10-2018 BEN78_05410 abb5b7cc81936bf5dcf4bb31acb8ea33 270 Pfam PF06827 Zinc finger found in FPG and IleRS 242 269 8.1E-8 T 13-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 BEN78_05410 abb5b7cc81936bf5dcf4bb31acb8ea33 270 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 269 8.0E-85 T 13-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 BEN78_05410 abb5b7cc81936bf5dcf4bb31acb8ea33 270 Gene3D G3DSA:3.20.190.10 2 129 2.6E-37 T 13-10-2018 IPR035937 MutM-like, N-terminal BEN78_05410 abb5b7cc81936bf5dcf4bb31acb8ea33 270 SUPERFAMILY SSF57716 218 269 5.7E-16 T 13-10-2018 BEN78_05410 abb5b7cc81936bf5dcf4bb31acb8ea33 270 Gene3D G3DSA:1.10.8.50 132 270 1.1E-45 T 13-10-2018 BEN78_05410 abb5b7cc81936bf5dcf4bb31acb8ea33 270 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 270 42.885 T 13-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 BEN78_05410 abb5b7cc81936bf5dcf4bb31acb8ea33 270 SMART SM01232 130 222 8.9E-48 T 13-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 BEN78_05410 abb5b7cc81936bf5dcf4bb31acb8ea33 270 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 130 219 4.7E-23 T 13-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 BEN78_05410 abb5b7cc81936bf5dcf4bb31acb8ea33 270 SMART SM00898 2 116 3.4E-50 T 13-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 BEN78_05410 abb5b7cc81936bf5dcf4bb31acb8ea33 270 ProSitePatterns PS01242 Zinc finger FPG-type signature. 245 269 - T 13-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 BEN78_05410 abb5b7cc81936bf5dcf4bb31acb8ea33 270 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 1.3E-32 T 13-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 BEN78_05410 abb5b7cc81936bf5dcf4bb31acb8ea33 270 SUPERFAMILY SSF81624 2 135 9.16E-40 T 13-10-2018 IPR035937 MutM-like, N-terminal BEN78_05410 abb5b7cc81936bf5dcf4bb31acb8ea33 270 SUPERFAMILY SSF46946 131 222 1.62E-29 T 13-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 BEN78_10990 bd5136af9d8ebc2fa5bd6875ae40a671 355 Pfam PF01112 Asparaginase 36 340 4.5E-114 T 13-10-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 BEN78_10990 bd5136af9d8ebc2fa5bd6875ae40a671 355 Gene3D G3DSA:3.60.20.30 211 351 8.8E-45 T 13-10-2018 BEN78_10990 bd5136af9d8ebc2fa5bd6875ae40a671 355 SUPERFAMILY SSF56235 36 340 3.09E-92 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BEN78_15750 c37aa2bb228045162afa62d9c8b363cc 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 2.7E-29 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BEN78_15750 c37aa2bb228045162afa62d9c8b363cc 69 SMART SM00357 6 69 1.1E-29 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 BEN78_15750 c37aa2bb228045162afa62d9c8b363cc 69 Gene3D G3DSA:2.40.50.140 4 68 1.4E-28 T 13-10-2018 BEN78_15750 c37aa2bb228045162afa62d9c8b363cc 69 SUPERFAMILY SSF50249 2 68 1.9E-24 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN78_15750 c37aa2bb228045162afa62d9c8b363cc 69 PIRSF PIRSF002599 1 69 1.2E-23 T 13-10-2018 IPR012156 Cold shock, CspA GO:0003676 BEN78_15750 c37aa2bb228045162afa62d9c8b363cc 69 PRINTS PR00050 Cold shock protein signature 7 22 1.2E-17 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BEN78_15750 c37aa2bb228045162afa62d9c8b363cc 69 PRINTS PR00050 Cold shock protein signature 27 36 1.2E-17 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BEN78_15750 c37aa2bb228045162afa62d9c8b363cc 69 PRINTS PR00050 Cold shock protein signature 42 60 1.2E-17 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BEN78_15750 c37aa2bb228045162afa62d9c8b363cc 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 13-10-2018 IPR019844 Cold-shock conserved site BEN78_15610 211128e02f34161d8e7fb41e77210649 214 SUPERFAMILY SSF47616 83 199 2.09E-27 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BEN78_15610 211128e02f34161d8e7fb41e77210649 214 Pfam PF13417 Glutathione S-transferase, N-terminal domain 5 74 1.0E-14 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 BEN78_15610 211128e02f34161d8e7fb41e77210649 214 Gene3D G3DSA:1.20.1050.10 82 196 4.7E-38 T 13-10-2018 BEN78_15610 211128e02f34161d8e7fb41e77210649 214 SUPERFAMILY SSF52833 2 75 2.21E-20 T 13-10-2018 IPR036249 Thioredoxin-like superfamily BEN78_15610 211128e02f34161d8e7fb41e77210649 214 Pfam PF00043 Glutathione S-transferase, C-terminal domain 121 193 1.0E-8 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal BEN78_15610 211128e02f34161d8e7fb41e77210649 214 Gene3D G3DSA:3.40.30.10 3 80 2.0E-23 T 13-10-2018 BEN78_06495 a3a29bc74927ee134443132f82cb7bf2 253 SUPERFAMILY SSF52343 110 249 2.75E-32 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BEN78_06495 a3a29bc74927ee134443132f82cb7bf2 253 Pfam PF00970 Oxidoreductase FAD-binding domain 8 107 1.8E-11 T 13-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 BEN78_06495 a3a29bc74927ee134443132f82cb7bf2 253 PRINTS PR00410 Phenol hydroxylase reductase family signature 102 111 9.5E-5 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BEN78_06495 a3a29bc74927ee134443132f82cb7bf2 253 PRINTS PR00410 Phenol hydroxylase reductase family signature 146 155 9.5E-5 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BEN78_06495 a3a29bc74927ee134443132f82cb7bf2 253 PRINTS PR00410 Phenol hydroxylase reductase family signature 217 225 9.5E-5 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BEN78_06495 a3a29bc74927ee134443132f82cb7bf2 253 PRINTS PR00410 Phenol hydroxylase reductase family signature 35 47 9.5E-5 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BEN78_06495 a3a29bc74927ee134443132f82cb7bf2 253 Gene3D G3DSA:3.40.50.80 108 252 5.3E-29 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BEN78_06495 a3a29bc74927ee134443132f82cb7bf2 253 Gene3D G3DSA:2.40.30.10 2 106 4.1E-15 T 13-10-2018 BEN78_06495 a3a29bc74927ee134443132f82cb7bf2 253 SUPERFAMILY SSF63380 4 111 2.87E-19 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BEN78_06495 a3a29bc74927ee134443132f82cb7bf2 253 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 55 62 7.7E-8 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BEN78_06495 a3a29bc74927ee134443132f82cb7bf2 253 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 119 138 7.7E-8 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BEN78_06495 a3a29bc74927ee134443132f82cb7bf2 253 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 158 169 7.7E-8 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BEN78_06495 a3a29bc74927ee134443132f82cb7bf2 253 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 217 225 7.7E-8 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BEN78_06495 a3a29bc74927ee134443132f82cb7bf2 253 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 146 155 7.7E-8 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BEN78_06495 a3a29bc74927ee134443132f82cb7bf2 253 Pfam PF00175 Oxidoreductase NAD-binding domain 120 230 1.3E-15 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 BEN78_12945 b702b6c49ad95ef5f3ae88798e2cbd35 735 SUPERFAMILY SSF53335 419 730 1.38E-53 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_12945 b702b6c49ad95ef5f3ae88798e2cbd35 735 PIRSF PIRSF037618 1 735 4.4E-271 T 13-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 BEN78_12945 b702b6c49ad95ef5f3ae88798e2cbd35 735 Gene3D G3DSA:3.40.50.150 168 389 6.8E-132 T 13-10-2018 BEN78_12945 b702b6c49ad95ef5f3ae88798e2cbd35 735 Gene3D G3DSA:3.30.750.80 415 518 5.4E-32 T 13-10-2018 BEN78_12945 b702b6c49ad95ef5f3ae88798e2cbd35 735 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 3 735 30.122 T 13-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 BEN78_12945 b702b6c49ad95ef5f3ae88798e2cbd35 735 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 326 332 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BEN78_12945 b702b6c49ad95ef5f3ae88798e2cbd35 735 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 536 686 1.1E-16 T 13-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 BEN78_12945 b702b6c49ad95ef5f3ae88798e2cbd35 735 Pfam PF01170 Putative RNA methylase family UPF0020 161 390 1.1E-37 T 13-10-2018 IPR000241 Putative RNA methylase domain BEN78_12945 b702b6c49ad95ef5f3ae88798e2cbd35 735 Gene3D G3DSA:3.30.2130.30 4 264 6.8E-132 T 13-10-2018 BEN78_12945 b702b6c49ad95ef5f3ae88798e2cbd35 735 Pfam PF02926 THUMP domain 31 152 1.1E-7 T 13-10-2018 IPR004114 THUMP domain GO:0003723 BEN78_12945 b702b6c49ad95ef5f3ae88798e2cbd35 735 Gene3D G3DSA:3.40.50.150 519 735 2.4E-63 T 13-10-2018 BEN78_12945 b702b6c49ad95ef5f3ae88798e2cbd35 735 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 198 209 - T 13-10-2018 IPR000241 Putative RNA methylase domain BEN78_12945 b702b6c49ad95ef5f3ae88798e2cbd35 735 SMART SM00981 55 153 5.5E-18 T 13-10-2018 IPR004114 THUMP domain GO:0003723 BEN78_12945 b702b6c49ad95ef5f3ae88798e2cbd35 735 SUPERFAMILY SSF53335 145 393 1.26E-35 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_05500 2ce61c9968a87a35bd6b3cbcd6ac2638 245 Pfam PF01514 Secretory protein of YscJ/FliF family 4 173 5.1E-25 T 13-10-2018 IPR006182 Secretory protein YscJ/FliF BEN78_05500 2ce61c9968a87a35bd6b3cbcd6ac2638 245 Gene3D G3DSA:3.30.300.30 87 191 2.0E-17 T 13-10-2018 BEN78_05500 2ce61c9968a87a35bd6b3cbcd6ac2638 245 Gene3D G3DSA:3.30.70.1530 14 84 1.4E-20 T 13-10-2018 BEN78_05500 2ce61c9968a87a35bd6b3cbcd6ac2638 245 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 158 170 2.8E-19 T 13-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 BEN78_05500 2ce61c9968a87a35bd6b3cbcd6ac2638 245 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 17 27 2.8E-19 T 13-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 BEN78_05500 2ce61c9968a87a35bd6b3cbcd6ac2638 245 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 110 123 2.8E-19 T 13-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 BEN78_05500 2ce61c9968a87a35bd6b3cbcd6ac2638 245 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 70 83 2.8E-19 T 13-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 BEN78_05500 2ce61c9968a87a35bd6b3cbcd6ac2638 245 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 90 105 2.8E-19 T 13-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 BEN78_13205 8c57978746ef3f26b8e9b437fff304dc 172 Gene3D G3DSA:3.30.70.640 10 168 4.0E-56 T 13-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BEN78_13205 8c57978746ef3f26b8e9b437fff304dc 172 SUPERFAMILY SSF55040 19 162 1.96E-46 T 13-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BEN78_13205 8c57978746ef3f26b8e9b437fff304dc 172 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 12 161 2.5E-51 T 13-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BEN78_13205 8c57978746ef3f26b8e9b437fff304dc 172 Pfam PF01967 MoaC family 23 159 4.8E-46 T 13-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BEN78_14145 0e5af36a7b143de340b367729fc9fa69 194 Pfam PF02659 Putative manganese efflux pump 33 181 2.4E-50 T 13-10-2018 IPR003810 Putative manganese efflux pump BEN78_14145 0e5af36a7b143de340b367729fc9fa69 194 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 184 25.396 T 13-10-2018 IPR022929 Putative manganese efflux pump MntP BEN78_04820 562fd1c901461989af542dd4891ad2d9 571 SUPERFAMILY SSF52025 146 229 5.75E-7 T 13-10-2018 BEN78_04820 562fd1c901461989af542dd4891ad2d9 571 Pfam PF04389 Peptidase family M28 314 530 6.3E-45 T 13-10-2018 IPR007484 Peptidase M28 BEN78_04820 562fd1c901461989af542dd4891ad2d9 571 Gene3D G3DSA:3.40.630.10 264 543 3.7E-50 T 13-10-2018 BEN78_04820 562fd1c901461989af542dd4891ad2d9 571 Pfam PF02225 PA domain 148 239 7.4E-8 T 13-10-2018 IPR003137 PA domain BEN78_04820 562fd1c901461989af542dd4891ad2d9 571 SUPERFAMILY SSF53187 42 545 2.23E-61 T 13-10-2018 BEN78_12310 07ca8aa44ac0d1e79ff8e3c3b9a29fdc 260 Gene3D G3DSA:3.90.226.10 1 202 1.5E-75 T 13-10-2018 BEN78_12310 07ca8aa44ac0d1e79ff8e3c3b9a29fdc 260 Gene3D G3DSA:1.10.12.10 203 258 1.6E-17 T 13-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal BEN78_12310 07ca8aa44ac0d1e79ff8e3c3b9a29fdc 260 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 101 121 - T 13-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 BEN78_12310 07ca8aa44ac0d1e79ff8e3c3b9a29fdc 260 SUPERFAMILY SSF52096 2 259 7.29E-91 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BEN78_12310 07ca8aa44ac0d1e79ff8e3c3b9a29fdc 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 259 2.7E-68 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 BEN78_07430 01b8235baa2d0674e89c06534fe3af5f 647 Gene3D G3DSA:3.40.50.1820 369 644 3.5E-61 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_07430 01b8235baa2d0674e89c06534fe3af5f 647 Gene3D G3DSA:2.120.10.30 57 269 3.8E-14 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BEN78_07430 01b8235baa2d0674e89c06534fe3af5f 647 SUPERFAMILY SSF53474 387 644 3.06E-52 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_07430 01b8235baa2d0674e89c06534fe3af5f 647 Pfam PF00326 Prolyl oligopeptidase family 439 640 2.5E-31 T 13-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 BEN78_07430 01b8235baa2d0674e89c06534fe3af5f 647 SUPERFAMILY SSF82171 121 375 3.33E-18 T 13-10-2018 BEN78_16010 ac08790587b5da740d9117f0e1e8bd93 285 Pfam PF07043 Protein of unknown function (DUF1328) 233 271 8.5E-11 T 13-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 BEN78_16010 ac08790587b5da740d9117f0e1e8bd93 285 Pfam PF06197 Protein of unknown function (DUF998) 5 182 2.6E-15 T 13-10-2018 IPR009339 Protein of unknown function DUF998 BEN78_16010 ac08790587b5da740d9117f0e1e8bd93 285 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 228 279 19.536 T 13-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 BEN78_05935 b1e20a7feac0367fb319c546ab768cc7 163 Gene3D G3DSA:1.10.1660.10 1 125 1.9E-38 T 13-10-2018 BEN78_05935 b1e20a7feac0367fb319c546ab768cc7 163 Pfam PF00376 MerR family regulatory protein 2 39 3.4E-17 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN78_05935 b1e20a7feac0367fb319c546ab768cc7 163 SMART SM00422 1 70 1.0E-34 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN78_05935 b1e20a7feac0367fb319c546ab768cc7 163 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 1.5E-53 T 13-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 BEN78_05935 b1e20a7feac0367fb319c546ab768cc7 163 SUPERFAMILY SSF46955 1 126 4.76E-40 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily BEN78_05935 b1e20a7feac0367fb319c546ab768cc7 163 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN78_05935 b1e20a7feac0367fb319c546ab768cc7 163 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 2.1E-14 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN78_05935 b1e20a7feac0367fb319c546ab768cc7 163 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 2.1E-14 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN78_05935 b1e20a7feac0367fb319c546ab768cc7 163 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 2.1E-14 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN78_05935 b1e20a7feac0367fb319c546ab768cc7 163 Pfam PF09278 MerR, DNA binding 44 108 6.8E-21 T 13-10-2018 IPR015358 Transcription regulator MerR, DNA binding BEN78_12105 bc9703c3cb0a693e6fa849ca69e2cd37 500 PIRSF PIRSF017184 4 494 4.6E-123 T 13-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 BEN78_12105 bc9703c3cb0a693e6fa849ca69e2cd37 500 Pfam PF03853 YjeF-related protein N-terminus 29 185 3.5E-39 T 13-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 BEN78_12105 bc9703c3cb0a693e6fa849ca69e2cd37 500 SUPERFAMILY SSF64153 6 246 3.79E-54 T 13-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 BEN78_12105 bc9703c3cb0a693e6fa849ca69e2cd37 500 Pfam PF01256 Carbohydrate kinase 248 485 9.2E-59 T 13-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 BEN78_12105 bc9703c3cb0a693e6fa849ca69e2cd37 500 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 227 490 1.1E-71 T 13-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 BEN78_12105 bc9703c3cb0a693e6fa849ca69e2cd37 500 Gene3D G3DSA:3.40.1190.20 220 492 1.7E-83 T 13-10-2018 IPR029056 Ribokinase-like BEN78_12105 bc9703c3cb0a693e6fa849ca69e2cd37 500 Gene3D G3DSA:3.40.50.10260 3 216 2.0E-52 T 13-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 BEN78_12105 bc9703c3cb0a693e6fa849ca69e2cd37 500 SUPERFAMILY SSF53613 224 490 2.96E-74 T 13-10-2018 IPR029056 Ribokinase-like BEN78_12105 bc9703c3cb0a693e6fa849ca69e2cd37 500 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 8 209 22.268 T 13-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 BEN78_12105 bc9703c3cb0a693e6fa849ca69e2cd37 500 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 21 209 3.5E-36 T 13-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 BEN78_12105 bc9703c3cb0a693e6fa849ca69e2cd37 500 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 225 492 22.945 T 13-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 BEN78_01075 0a5d4fe8df8a2e0bbaaae9fcf0c2b611 504 Pfam PF10150 Ribonuclease E/G family 129 408 2.5E-97 T 13-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 BEN78_01075 0a5d4fe8df8a2e0bbaaae9fcf0c2b611 504 Gene3D G3DSA:2.40.50.140 32 132 4.6E-30 T 13-10-2018 BEN78_01075 0a5d4fe8df8a2e0bbaaae9fcf0c2b611 504 Pfam PF00575 S1 RNA binding domain 38 83 8.2E-5 T 13-10-2018 IPR003029 S1 domain GO:0003676 BEN78_01075 0a5d4fe8df8a2e0bbaaae9fcf0c2b611 504 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 441 1.6E-149 T 13-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 BEN78_01075 0a5d4fe8df8a2e0bbaaae9fcf0c2b611 504 SUPERFAMILY SSF50249 39 133 5.72E-17 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN78_01075 0a5d4fe8df8a2e0bbaaae9fcf0c2b611 504 SMART SM00316 37 127 1.2E-7 T 13-10-2018 IPR022967 RNA-binding domain, S1 BEN78_01075 0a5d4fe8df8a2e0bbaaae9fcf0c2b611 504 Gene3D G3DSA:3.40.1260.20 418 503 2.0E-5 T 13-10-2018 BEN78_04840 77e4e5e32853b393c3218fb19876f935 491 Gene3D G3DSA:2.70.70.10 303 432 4.8E-85 T 13-10-2018 IPR011055 Duplicated hybrid motif BEN78_04840 77e4e5e32853b393c3218fb19876f935 491 Pfam PF01551 Peptidase family M23 330 426 2.4E-34 T 13-10-2018 IPR016047 Peptidase M23 BEN78_04840 77e4e5e32853b393c3218fb19876f935 491 Gene3D G3DSA:3.10.450.350 208 447 4.8E-85 T 13-10-2018 BEN78_04840 77e4e5e32853b393c3218fb19876f935 491 Pfam PF04225 Opacity-associated protein A LysM-like domain 106 174 3.1E-5 T 13-10-2018 IPR007340 Opacity-associated protein A BEN78_04840 77e4e5e32853b393c3218fb19876f935 491 SUPERFAMILY SSF51261 181 428 1.1E-68 T 13-10-2018 IPR011055 Duplicated hybrid motif BEN78_04840 77e4e5e32853b393c3218fb19876f935 491 Gene3D G3DSA:3.10.450.350 95 188 6.6E-14 T 13-10-2018 BEN78_14480 1285de2d2fc366cdcbeda8e6907f4b88 80 Pfam PF01313 Bacterial export proteins, family 3 2 68 1.9E-20 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BEN78_14480 1285de2d2fc366cdcbeda8e6907f4b88 80 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 30 45 5.0E-14 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BEN78_14480 1285de2d2fc366cdcbeda8e6907f4b88 80 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 45 67 5.0E-14 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BEN78_14480 1285de2d2fc366cdcbeda8e6907f4b88 80 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 9 30 5.0E-14 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BEN78_14480 1285de2d2fc366cdcbeda8e6907f4b88 80 PIRSF PIRSF004669 1 80 2.7E-23 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BEN78_06515 05930098164d4b0cc737dc8798f539c6 925 Gene3D G3DSA:3.30.830.10 502 717 4.1E-30 T 13-10-2018 BEN78_06515 05930098164d4b0cc737dc8798f539c6 925 SUPERFAMILY SSF63411 276 460 2.55E-32 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BEN78_06515 05930098164d4b0cc737dc8798f539c6 925 SUPERFAMILY SSF63411 488 725 1.19E-33 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BEN78_06515 05930098164d4b0cc737dc8798f539c6 925 SUPERFAMILY SSF63411 734 921 2.39E-33 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BEN78_06515 05930098164d4b0cc737dc8798f539c6 925 Pfam PF05193 Peptidase M16 inactive domain 671 850 5.8E-28 T 13-10-2018 IPR007863 Peptidase M16, C-terminal BEN78_06515 05930098164d4b0cc737dc8798f539c6 925 Pfam PF05193 Peptidase M16 inactive domain 218 391 4.8E-28 T 13-10-2018 IPR007863 Peptidase M16, C-terminal BEN78_06515 05930098164d4b0cc737dc8798f539c6 925 SUPERFAMILY SSF63411 50 261 5.5E-51 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BEN78_06515 05930098164d4b0cc737dc8798f539c6 925 Gene3D G3DSA:3.30.830.10 47 265 1.0E-61 T 13-10-2018 BEN78_06515 05930098164d4b0cc737dc8798f539c6 925 Pfam PF00675 Insulinase (Peptidase family M16) 67 207 2.5E-19 T 13-10-2018 IPR011765 Peptidase M16, N-terminal BEN78_06515 05930098164d4b0cc737dc8798f539c6 925 Gene3D G3DSA:3.30.830.10 268 474 3.9E-52 T 13-10-2018 BEN78_06515 05930098164d4b0cc737dc8798f539c6 925 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 82 105 - T 13-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 BEN78_06515 05930098164d4b0cc737dc8798f539c6 925 Gene3D G3DSA:3.30.830.10 723 920 3.8E-40 T 13-10-2018 BEN78_02145 8eff682761de3ca881b1b78cdc8ce10a 867 PIRSF PIRSF036459 1 866 0.0 T 13-10-2018 IPR011246 Bifunctional diaminopimelate decarboxylase/aspartate kinase BEN78_02145 8eff682761de3ca881b1b78cdc8ce10a 867 ProSitePatterns PS00324 Aspartokinase signature. 11 19 - T 13-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BEN78_02145 8eff682761de3ca881b1b78cdc8ce10a 867 SUPERFAMILY SSF53633 8 301 7.1E-56 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BEN78_02145 8eff682761de3ca881b1b78cdc8ce10a 867 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 515 749 6.0E-38 T 13-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 BEN78_02145 8eff682761de3ca881b1b78cdc8ce10a 867 Gene3D G3DSA:3.30.70.260 314 456 1.0E-34 T 13-10-2018 BEN78_02145 8eff682761de3ca881b1b78cdc8ce10a 867 Pfam PF00696 Amino acid kinase family 9 288 5.0E-40 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 BEN78_02145 8eff682761de3ca881b1b78cdc8ce10a 867 PRINTS PR01181 Diaminopimelate decarboxylase signature 850 867 2.0E-12 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BEN78_02145 8eff682761de3ca881b1b78cdc8ce10a 867 PRINTS PR01181 Diaminopimelate decarboxylase signature 636 645 2.0E-12 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BEN78_02145 8eff682761de3ca881b1b78cdc8ce10a 867 PRINTS PR01181 Diaminopimelate decarboxylase signature 767 785 2.0E-12 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BEN78_02145 8eff682761de3ca881b1b78cdc8ce10a 867 PRINTS PR01181 Diaminopimelate decarboxylase signature 550 567 2.0E-12 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BEN78_02145 8eff682761de3ca881b1b78cdc8ce10a 867 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 9 457 1.2E-80 T 13-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BEN78_02145 8eff682761de3ca881b1b78cdc8ce10a 867 SUPERFAMILY SSF50621 731 862 6.07E-40 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BEN78_02145 8eff682761de3ca881b1b78cdc8ce10a 867 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 661 674 6.4E-23 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BEN78_02145 8eff682761de3ca881b1b78cdc8ce10a 867 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 739 758 6.4E-23 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BEN78_02145 8eff682761de3ca881b1b78cdc8ce10a 867 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 532 550 6.4E-23 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BEN78_02145 8eff682761de3ca881b1b78cdc8ce10a 867 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 552 564 6.4E-23 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BEN78_02145 8eff682761de3ca881b1b78cdc8ce10a 867 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 840 853 6.4E-23 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BEN78_02145 8eff682761de3ca881b1b78cdc8ce10a 867 SUPERFAMILY SSF55021 386 459 7.63E-10 T 13-10-2018 BEN78_02145 8eff682761de3ca881b1b78cdc8ce10a 867 Gene3D G3DSA:3.30.70.260 320 392 1.0E-34 T 13-10-2018 BEN78_02145 8eff682761de3ca881b1b78cdc8ce10a 867 Gene3D G3DSA:2.40.37.10 503 863 4.9E-91 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BEN78_02145 8eff682761de3ca881b1b78cdc8ce10a 867 SUPERFAMILY SSF51419 503 751 1.24E-54 T 13-10-2018 IPR029066 PLP-binding barrel BEN78_02145 8eff682761de3ca881b1b78cdc8ce10a 867 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 750 840 4.7E-20 T 13-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 BEN78_02145 8eff682761de3ca881b1b78cdc8ce10a 867 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 532 550 - T 13-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site BEN78_02145 8eff682761de3ca881b1b78cdc8ce10a 867 Gene3D G3DSA:3.20.20.10 511 753 4.9E-91 T 13-10-2018 IPR029066 PLP-binding barrel BEN78_02145 8eff682761de3ca881b1b78cdc8ce10a 867 SUPERFAMILY SSF55021 309 372 2.14E-11 T 13-10-2018 BEN78_02145 8eff682761de3ca881b1b78cdc8ce10a 867 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 692 708 - T 13-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site BEN78_02145 8eff682761de3ca881b1b78cdc8ce10a 867 Gene3D G3DSA:3.40.1160.10 8 302 8.5E-70 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BEN78_15555 246a5c37cfd71c72eec96e625968e90d 238 Pfam PF00005 ABC transporter 33 180 8.9E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_15555 246a5c37cfd71c72eec96e625968e90d 238 Gene3D G3DSA:3.40.50.300 10 237 1.1E-62 T 13-10-2018 BEN78_15555 246a5c37cfd71c72eec96e625968e90d 238 SMART SM00382 41 229 4.1E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_15555 246a5c37cfd71c72eec96e625968e90d 238 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 12 231 6.3E-100 T 13-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 BEN78_15555 246a5c37cfd71c72eec96e625968e90d 238 SUPERFAMILY SSF52540 13 234 1.2E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_15555 246a5c37cfd71c72eec96e625968e90d 238 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN78_15905 a92874ea9a22ff1782bc09434d08ad39 485 SMART SM00479 4 197 3.9E-8 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BEN78_15905 a92874ea9a22ff1782bc09434d08ad39 485 Gene3D G3DSA:3.30.420.10 3 195 5.1E-62 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BEN78_15905 a92874ea9a22ff1782bc09434d08ad39 485 Pfam PF08411 Exonuclease C-terminal 206 473 1.1E-88 T 13-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 BEN78_15905 a92874ea9a22ff1782bc09434d08ad39 485 Gene3D G3DSA:2.30.30.450 208 348 6.7E-39 T 13-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily BEN78_15905 a92874ea9a22ff1782bc09434d08ad39 485 SUPERFAMILY SSF53098 4 474 1.31E-107 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily BEN78_15905 a92874ea9a22ff1782bc09434d08ad39 485 PIRSF PIRSF000977 1 479 3.4E-174 T 13-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 BEN78_15905 a92874ea9a22ff1782bc09434d08ad39 485 Pfam PF00929 Exonuclease 7 186 8.9E-22 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BEN78_15905 a92874ea9a22ff1782bc09434d08ad39 485 Gene3D G3DSA:1.20.1280.70 355 415 1.4E-23 T 13-10-2018 BEN78_00320 904e960f0a0eab1c8db4fdb5a2214b1b 181 Gene3D G3DSA:3.30.1370.110 49 181 9.3E-36 T 13-10-2018 BEN78_00320 904e960f0a0eab1c8db4fdb5a2214b1b 181 SMART SM00463 94 178 1.2E-10 T 13-10-2018 IPR002625 Smr domain BEN78_00320 904e960f0a0eab1c8db4fdb5a2214b1b 181 SUPERFAMILY SSF160443 96 178 1.12E-14 T 13-10-2018 IPR036063 Smr domain superfamily BEN78_00320 904e960f0a0eab1c8db4fdb5a2214b1b 181 Pfam PF01713 Smr domain 97 178 2.7E-20 T 13-10-2018 IPR002625 Smr domain BEN78_11175 99181262169b91216eae20710fbfe26b 65 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 11 65 3.1E-19 T 13-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_11175 99181262169b91216eae20710fbfe26b 65 SUPERFAMILY SSF55129 10 65 1.31E-16 T 13-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily BEN78_11175 99181262169b91216eae20710fbfe26b 65 Pfam PF00327 Ribosomal protein L30p/L7e 12 61 4.2E-13 T 13-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain BEN78_11175 99181262169b91216eae20710fbfe26b 65 Gene3D G3DSA:3.30.1390.20 9 65 3.6E-19 T 13-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily BEN78_11175 99181262169b91216eae20710fbfe26b 65 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 65 18.647 T 13-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_11175 99181262169b91216eae20710fbfe26b 65 PIRSF PIRSF002211 1 65 1.7E-23 T 13-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_09815 909844011e31c512e5f85303d148a6f0 449 Pfam PF00557 Metallopeptidase family M24 173 433 4.0E-41 T 13-10-2018 IPR000994 Peptidase M24 BEN78_09815 909844011e31c512e5f85303d148a6f0 449 Gene3D G3DSA:3.90.230.10 165 447 5.6E-73 T 13-10-2018 BEN78_09815 909844011e31c512e5f85303d148a6f0 449 Hamap MF_01279 Xaa-Pro dipeptidase [pepQ]. 6 446 52.279 T 13-10-2018 IPR022846 Xaa-Pro dipeptidase GO:0016795 BEN78_09815 909844011e31c512e5f85303d148a6f0 449 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 338 350 - T 13-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site BEN78_09815 909844011e31c512e5f85303d148a6f0 449 SUPERFAMILY SSF55920 167 441 6.93E-53 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like BEN78_09815 909844011e31c512e5f85303d148a6f0 449 Gene3D G3DSA:3.40.350.10 7 163 1.9E-55 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BEN78_15715 d31442bf3f8392763898890cc5fdca4f 624 ProSitePatterns PS00211 ABC transporters family signature. 521 535 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN78_15715 d31442bf3f8392763898890cc5fdca4f 624 SUPERFAMILY SSF90123 29 341 9.03E-28 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BEN78_15715 d31442bf3f8392763898890cc5fdca4f 624 Pfam PF00005 ABC transporter 396 549 1.7E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_15715 d31442bf3f8392763898890cc5fdca4f 624 Gene3D G3DSA:3.40.50.300 369 622 5.3E-82 T 13-10-2018 BEN78_15715 d31442bf3f8392763898890cc5fdca4f 624 SUPERFAMILY SSF52540 368 619 1.33E-75 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_15715 d31442bf3f8392763898890cc5fdca4f 624 Gene3D G3DSA:1.20.1560.10 12 364 1.1E-18 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BEN78_15715 d31442bf3f8392763898890cc5fdca4f 624 SMART SM00382 404 595 3.9E-20 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_08440 0149af7771283adcee9e0b865c836e75 104 SUPERFAMILY SSF69118 2 101 2.09E-19 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 BEN78_08440 0149af7771283adcee9e0b865c836e75 104 Gene3D G3DSA:1.20.1290.10 4 104 4.5E-19 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 BEN78_08440 0149af7771283adcee9e0b865c836e75 104 Pfam PF02627 Carboxymuconolactone decarboxylase family 15 96 1.2E-11 T 13-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 BEN78_09920 2de1c9d083f069d16c028de531b9a7bc 430 Gene3D G3DSA:2.20.28.60 1 55 4.4E-17 T 13-10-2018 BEN78_09920 2de1c9d083f069d16c028de531b9a7bc 430 Gene3D G3DSA:1.10.580.10 62 416 5.6E-145 T 13-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 BEN78_09920 2de1c9d083f069d16c028de531b9a7bc 430 Gene3D G3DSA:1.10.230.10 273 381 5.6E-145 T 13-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain BEN78_09920 2de1c9d083f069d16c028de531b9a7bc 430 ProSitePatterns PS00480 Citrate synthase signature. 308 320 - T 13-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 BEN78_09920 2de1c9d083f069d16c028de531b9a7bc 430 PIRSF PIRSF001369 42 429 5.0E-160 T 13-10-2018 IPR024176 Citrate synthase, bacterial-type BEN78_09920 2de1c9d083f069d16c028de531b9a7bc 430 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 18 427 6.0E-204 T 13-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 BEN78_09920 2de1c9d083f069d16c028de531b9a7bc 430 SUPERFAMILY SSF48256 16 428 7.59E-164 T 13-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 BEN78_09920 2de1c9d083f069d16c028de531b9a7bc 430 PRINTS PR00143 Citrate synthase signature 384 398 4.8E-54 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 BEN78_09920 2de1c9d083f069d16c028de531b9a7bc 430 PRINTS PR00143 Citrate synthase signature 301 321 4.8E-54 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 BEN78_09920 2de1c9d083f069d16c028de531b9a7bc 430 PRINTS PR00143 Citrate synthase signature 170 183 4.8E-54 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 BEN78_09920 2de1c9d083f069d16c028de531b9a7bc 430 PRINTS PR00143 Citrate synthase signature 246 274 4.8E-54 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 BEN78_09920 2de1c9d083f069d16c028de531b9a7bc 430 PRINTS PR00143 Citrate synthase signature 224 239 4.8E-54 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 BEN78_09920 2de1c9d083f069d16c028de531b9a7bc 430 PRINTS PR00143 Citrate synthase signature 364 380 4.8E-54 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 BEN78_09920 2de1c9d083f069d16c028de531b9a7bc 430 Pfam PF00285 Citrate synthase, C-terminal domain 51 416 3.9E-136 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 BEN78_08080 1114f0e1441dc48849c16c01b69f4ee9 304 Gene3D G3DSA:3.40.1500.10 1 300 4.0E-126 T 13-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BEN78_08080 1114f0e1441dc48849c16c01b69f4ee9 304 Pfam PF01218 Coproporphyrinogen III oxidase 8 300 1.5E-126 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BEN78_08080 1114f0e1441dc48849c16c01b69f4ee9 304 PRINTS PR00073 Coprogen oxidase signature 89 113 7.0E-83 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BEN78_08080 1114f0e1441dc48849c16c01b69f4ee9 304 PRINTS PR00073 Coprogen oxidase signature 162 191 7.0E-83 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BEN78_08080 1114f0e1441dc48849c16c01b69f4ee9 304 PRINTS PR00073 Coprogen oxidase signature 261 287 7.0E-83 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BEN78_08080 1114f0e1441dc48849c16c01b69f4ee9 304 PRINTS PR00073 Coprogen oxidase signature 233 260 7.0E-83 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BEN78_08080 1114f0e1441dc48849c16c01b69f4ee9 304 PRINTS PR00073 Coprogen oxidase signature 30 46 7.0E-83 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BEN78_08080 1114f0e1441dc48849c16c01b69f4ee9 304 PRINTS PR00073 Coprogen oxidase signature 124 146 7.0E-83 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BEN78_08080 1114f0e1441dc48849c16c01b69f4ee9 304 PRINTS PR00073 Coprogen oxidase signature 47 68 7.0E-83 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BEN78_08080 1114f0e1441dc48849c16c01b69f4ee9 304 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 2 276 54.79 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BEN78_08080 1114f0e1441dc48849c16c01b69f4ee9 304 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 166 190 - T 13-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BEN78_08080 1114f0e1441dc48849c16c01b69f4ee9 304 PIRSF PIRSF000166 1 301 1.4E-119 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BEN78_08080 1114f0e1441dc48849c16c01b69f4ee9 304 SUPERFAMILY SSF102886 3 300 1.7E-126 T 13-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BEN78_16735 84c27423647fc6d8f08d39accb8b935b 401 Gene3D G3DSA:3.90.1260.10 69 356 1.2E-104 T 13-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BEN78_16735 84c27423647fc6d8f08d39accb8b935b 401 SUPERFAMILY SSF69864 179 400 3.53E-56 T 13-10-2018 BEN78_16735 84c27423647fc6d8f08d39accb8b935b 401 Pfam PF00764 Arginosuccinate synthase 11 395 7.8E-84 T 13-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BEN78_16735 84c27423647fc6d8f08d39accb8b935b 401 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 121 132 - T 13-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BEN78_16735 84c27423647fc6d8f08d39accb8b935b 401 SUPERFAMILY SSF52402 9 189 7.72E-34 T 13-10-2018 BEN78_16735 84c27423647fc6d8f08d39accb8b935b 401 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 13 21 - T 13-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BEN78_16735 84c27423647fc6d8f08d39accb8b935b 401 TIGRFAM TIGR00032 argG: argininosuccinate synthase 10 399 4.2E-83 T 13-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BEN78_16735 84c27423647fc6d8f08d39accb8b935b 401 Gene3D G3DSA:3.40.50.620 10 178 1.2E-104 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_16735 84c27423647fc6d8f08d39accb8b935b 401 Hamap MF_00005 Argininosuccinate synthase [argG]. 7 401 38.474 T 13-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BEN78_11740 36a6d6aeac301411f9b678e181657ed0 210 Gene3D G3DSA:3.40.50.2020 1 208 2.3E-66 T 13-10-2018 BEN78_11740 36a6d6aeac301411f9b678e181657ed0 210 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 1.3E-61 T 13-10-2018 BEN78_11740 36a6d6aeac301411f9b678e181657ed0 210 SUPERFAMILY SSF53271 4 206 4.06E-61 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like BEN78_11740 36a6d6aeac301411f9b678e181657ed0 210 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 41.663 T 13-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 BEN78_11740 36a6d6aeac301411f9b678e181657ed0 210 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 207 1.8E-79 T 13-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 BEN78_14745 cafb54f653e17984d143b45e19f3e7c8 320 Gene3D G3DSA:3.50.50.60 121 247 5.8E-123 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_14745 cafb54f653e17984d143b45e19f3e7c8 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 151 169 3.9E-39 T 13-10-2018 BEN78_14745 cafb54f653e17984d143b45e19f3e7c8 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 109 127 3.9E-39 T 13-10-2018 BEN78_14745 cafb54f653e17984d143b45e19f3e7c8 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 269 291 3.9E-39 T 13-10-2018 BEN78_14745 cafb54f653e17984d143b45e19f3e7c8 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 3.9E-39 T 13-10-2018 BEN78_14745 cafb54f653e17984d143b45e19f3e7c8 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 239 255 3.9E-39 T 13-10-2018 BEN78_14745 cafb54f653e17984d143b45e19f3e7c8 320 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 11 316 2.5E-116 T 13-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 BEN78_14745 cafb54f653e17984d143b45e19f3e7c8 320 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 11 300 4.3E-47 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BEN78_14745 cafb54f653e17984d143b45e19f3e7c8 320 SUPERFAMILY SSF51905 4 316 1.94E-51 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_14745 cafb54f653e17984d143b45e19f3e7c8 320 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 139 159 - T 13-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 BEN78_14745 cafb54f653e17984d143b45e19f3e7c8 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 110 118 1.3E-74 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN78_14745 cafb54f653e17984d143b45e19f3e7c8 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 279 297 1.3E-74 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN78_14745 cafb54f653e17984d143b45e19f3e7c8 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 132 144 1.3E-74 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN78_14745 cafb54f653e17984d143b45e19f3e7c8 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 147 171 1.3E-74 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN78_14745 cafb54f653e17984d143b45e19f3e7c8 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 241 262 1.3E-74 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN78_14745 cafb54f653e17984d143b45e19f3e7c8 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 11 33 1.3E-74 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN78_14745 cafb54f653e17984d143b45e19f3e7c8 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 44 59 1.3E-74 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN78_14745 cafb54f653e17984d143b45e19f3e7c8 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 65 75 1.3E-74 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN78_14745 cafb54f653e17984d143b45e19f3e7c8 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 202 218 1.3E-74 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN78_14745 cafb54f653e17984d143b45e19f3e7c8 320 Gene3D G3DSA:3.50.50.60 13 315 5.8E-123 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_07950 7c4d827f8eea091b6cb2c5e8c6b0f56a 714 Gene3D G3DSA:2.180.10.10 297 473 2.9E-10 T 13-10-2018 BEN78_07950 7c4d827f8eea091b6cb2c5e8c6b0f56a 714 Gene3D G3DSA:2.180.10.10 89 218 2.0E-6 T 13-10-2018 BEN78_07950 7c4d827f8eea091b6cb2c5e8c6b0f56a 714 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 361 393 0.0019 T 13-10-2018 IPR006530 YD repeat BEN78_07950 7c4d827f8eea091b6cb2c5e8c6b0f56a 714 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 294 335 1.3E-8 T 13-10-2018 IPR006530 YD repeat BEN78_07950 7c4d827f8eea091b6cb2c5e8c6b0f56a 714 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 155 190 2.6E-4 T 13-10-2018 IPR006530 YD repeat BEN78_07950 7c4d827f8eea091b6cb2c5e8c6b0f56a 714 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 273 311 4.4E-6 T 13-10-2018 IPR006530 YD repeat BEN78_07950 7c4d827f8eea091b6cb2c5e8c6b0f56a 714 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 201 229 1.7E-5 T 13-10-2018 IPR006530 YD repeat BEN78_07950 7c4d827f8eea091b6cb2c5e8c6b0f56a 714 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 336 376 1.4E-7 T 13-10-2018 IPR006530 YD repeat BEN78_07950 7c4d827f8eea091b6cb2c5e8c6b0f56a 714 Pfam PF05593 RHS Repeat 357 392 3.1E-5 T 13-10-2018 IPR031325 RHS repeat BEN78_07950 7c4d827f8eea091b6cb2c5e8c6b0f56a 714 Pfam PF05593 RHS Repeat 294 330 6.5E-7 T 13-10-2018 IPR031325 RHS repeat BEN78_07950 7c4d827f8eea091b6cb2c5e8c6b0f56a 714 Pfam PF05593 RHS Repeat 273 309 1.2E-4 T 13-10-2018 IPR031325 RHS repeat BEN78_07950 7c4d827f8eea091b6cb2c5e8c6b0f56a 714 Pfam PF05593 RHS Repeat 176 217 7.7E-6 T 13-10-2018 IPR031325 RHS repeat BEN78_07950 7c4d827f8eea091b6cb2c5e8c6b0f56a 714 Pfam PF05593 RHS Repeat 315 351 1.8E-6 T 13-10-2018 IPR031325 RHS repeat BEN78_06440 aaf74943930e0f4ecfee35d192dece97 46 Pfam PF00468 Ribosomal protein L34 3 46 7.7E-26 T 13-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_06440 aaf74943930e0f4ecfee35d192dece97 46 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 3 46 9.0E-26 T 13-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_06440 aaf74943930e0f4ecfee35d192dece97 46 ProSitePatterns PS00784 Ribosomal protein L34 signature. 4 23 - T 13-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_06440 aaf74943930e0f4ecfee35d192dece97 46 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 3 46 16.235 T 13-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_06440 aaf74943930e0f4ecfee35d192dece97 46 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 4 44 9.0E-13 T 13-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_03350 48e0558ef516d152e0cbbab13f5a8d2c 458 SUPERFAMILY SSF53686 4 323 4.71E-89 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BEN78_03350 48e0558ef516d152e0cbbab13f5a8d2c 458 Gene3D G3DSA:3.40.50.1100 9 312 6.0E-102 T 13-10-2018 BEN78_03350 48e0558ef516d152e0cbbab13f5a8d2c 458 Gene3D G3DSA:3.40.50.1100 40 153 6.0E-102 T 13-10-2018 BEN78_03350 48e0558ef516d152e0cbbab13f5a8d2c 458 Gene3D G3DSA:3.10.580.10 332 455 9.6E-16 T 13-10-2018 BEN78_03350 48e0558ef516d152e0cbbab13f5a8d2c 458 SMART SM00116 345 392 5.9E-5 T 13-10-2018 IPR000644 CBS domain BEN78_03350 48e0558ef516d152e0cbbab13f5a8d2c 458 Pfam PF00571 CBS domain 343 390 4.8E-5 T 13-10-2018 IPR000644 CBS domain BEN78_03350 48e0558ef516d152e0cbbab13f5a8d2c 458 SUPERFAMILY SSF54631 337 454 7.33E-17 T 13-10-2018 BEN78_03350 48e0558ef516d152e0cbbab13f5a8d2c 458 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 304 1.3E-61 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BEN78_03350 48e0558ef516d152e0cbbab13f5a8d2c 458 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 13-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 BEN78_11790 026f7d873317b2920e714dbc5d1bfdbe 378 SUPERFAMILY SSF51713 2 371 1.29E-153 T 13-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BEN78_11790 026f7d873317b2920e714dbc5d1bfdbe 378 Pfam PF01702 Queuine tRNA-ribosyltransferase 129 368 7.5E-87 T 13-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BEN78_11790 026f7d873317b2920e714dbc5d1bfdbe 378 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 4 371 53.863 T 13-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BEN78_11790 026f7d873317b2920e714dbc5d1bfdbe 378 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 6 371 1.2E-147 T 13-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BEN78_11790 026f7d873317b2920e714dbc5d1bfdbe 378 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 6 370 1.8E-152 T 13-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BEN78_11790 026f7d873317b2920e714dbc5d1bfdbe 378 Gene3D G3DSA:3.20.20.105 1 375 4.9E-158 T 13-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BEN78_11995 d8b394a859d4b13a2923e5049894a3be 218 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 5 210 1.7E-45 T 13-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 BEN78_11995 d8b394a859d4b13a2923e5049894a3be 218 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 1 211 28.197 T 13-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 BEN78_11995 d8b394a859d4b13a2923e5049894a3be 218 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 63 1.4E-9 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BEN78_11995 d8b394a859d4b13a2923e5049894a3be 218 Gene3D G3DSA:3.40.50.620 3 214 3.1E-56 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_11995 d8b394a859d4b13a2923e5049894a3be 218 Pfam PF01467 Cytidylyltransferase-like 5 184 6.6E-25 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BEN78_11995 d8b394a859d4b13a2923e5049894a3be 218 SUPERFAMILY SSF52374 4 212 1.46E-48 T 13-10-2018 BEN78_01770 0e7ed01a44ee3e939e2af40cff5a3b46 146 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 2 146 6.1E-57 T 13-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 BEN78_01770 0e7ed01a44ee3e939e2af40cff5a3b46 146 Gene3D G3DSA:3.10.20.80 1 51 2.8E-23 T 13-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 BEN78_01770 0e7ed01a44ee3e939e2af40cff5a3b46 146 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 146 24.191 T 13-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 BEN78_01770 0e7ed01a44ee3e939e2af40cff5a3b46 146 SUPERFAMILY SSF54364 2 54 3.79E-21 T 13-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 BEN78_01770 0e7ed01a44ee3e939e2af40cff5a3b46 146 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 59 144 6.1E-35 T 13-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 BEN78_01770 0e7ed01a44ee3e939e2af40cff5a3b46 146 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 2 52 1.1E-21 T 13-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 BEN78_01770 0e7ed01a44ee3e939e2af40cff5a3b46 146 ProSitePatterns PS00938 Initiation factor 3 signature. 34 47 - T 13-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 BEN78_01770 0e7ed01a44ee3e939e2af40cff5a3b46 146 SUPERFAMILY SSF55200 60 145 5.36E-30 T 13-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 BEN78_01770 0e7ed01a44ee3e939e2af40cff5a3b46 146 Gene3D G3DSA:3.30.110.10 52 146 5.4E-36 T 13-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 BEN78_14270 9b9d4b2a33feecb203045b87fd40977a 368 Gene3D G3DSA:1.10.3210.10 162 362 1.4E-70 T 13-10-2018 BEN78_14270 9b9d4b2a33feecb203045b87fd40977a 368 Pfam PF00072 Response regulator receiver domain 21 133 5.4E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_14270 9b9d4b2a33feecb203045b87fd40977a 368 SUPERFAMILY SSF52172 19 169 8.54E-37 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_14270 9b9d4b2a33feecb203045b87fd40977a 368 Pfam PF01966 HD domain 193 310 2.2E-18 T 13-10-2018 IPR006674 HD domain BEN78_14270 9b9d4b2a33feecb203045b87fd40977a 368 SUPERFAMILY SSF109604 161 348 3.14E-41 T 13-10-2018 BEN78_14270 9b9d4b2a33feecb203045b87fd40977a 368 Gene3D G3DSA:3.40.50.2300 6 155 2.2E-35 T 13-10-2018 BEN78_14270 9b9d4b2a33feecb203045b87fd40977a 368 SMART SM00471 183 320 6.5E-7 T 13-10-2018 IPR003607 HD/PDEase domain BEN78_14270 9b9d4b2a33feecb203045b87fd40977a 368 SMART SM00448 19 134 5.0E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_00205 71c558bba0e2302a6c6062aab49c170c 704 Gene3D G3DSA:3.40.50.1820 21 658 4.1E-104 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_00205 71c558bba0e2302a6c6062aab49c170c 704 SUPERFAMILY SSF53474 437 695 4.17E-48 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_00205 71c558bba0e2302a6c6062aab49c170c 704 Pfam PF00326 Prolyl oligopeptidase family 494 695 8.2E-48 T 13-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 BEN78_00205 71c558bba0e2302a6c6062aab49c170c 704 SUPERFAMILY SSF50993 22 414 6.54E-21 T 13-10-2018 BEN78_00205 71c558bba0e2302a6c6062aab49c170c 704 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 556 576 2.6E-39 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BEN78_00205 71c558bba0e2302a6c6062aab49c170c 704 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 498 522 2.6E-39 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BEN78_00205 71c558bba0e2302a6c6062aab49c170c 704 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 526 545 2.6E-39 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BEN78_00205 71c558bba0e2302a6c6062aab49c170c 704 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 630 652 2.6E-39 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BEN78_00205 71c558bba0e2302a6c6062aab49c170c 704 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 466 484 2.6E-39 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BEN78_00205 71c558bba0e2302a6c6062aab49c170c 704 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 611 626 2.6E-39 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BEN78_00205 71c558bba0e2302a6c6062aab49c170c 704 Gene3D G3DSA:2.130.10.120 66 427 4.1E-104 T 13-10-2018 BEN78_01290 aa3c44b26b9b46ca361f43e23fb0e293 114 SUPERFAMILY SSF51316 1 102 2.93E-27 T 13-10-2018 IPR011057 Mss4-like superfamily BEN78_01290 aa3c44b26b9b46ca361f43e23fb0e293 114 Gene3D G3DSA:2.170.150.70 3 113 4.0E-26 T 13-10-2018 BEN78_01290 aa3c44b26b9b46ca361f43e23fb0e293 114 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 24 98 2.0E-8 T 13-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 BEN78_16645 af00afca1cf9c71a7ff85af0bb097eda 638 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 153 168 - T 13-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 BEN78_16645 af00afca1cf9c71a7ff85af0bb097eda 638 Gene3D G3DSA:1.20.200.10 318 563 2.8E-78 T 13-10-2018 BEN78_16645 af00afca1cf9c71a7ff85af0bb097eda 638 Gene3D G3DSA:1.10.275.10 3 211 2.4E-64 T 13-10-2018 IPR024083 Fumarase/histidase, N-terminal BEN78_16645 af00afca1cf9c71a7ff85af0bb097eda 638 Gene3D G3DSA:1.20.200.10 212 290 6.9E-19 T 13-10-2018 BEN78_16645 af00afca1cf9c71a7ff85af0bb097eda 638 Pfam PF00221 Aromatic amino acid lyase 11 528 6.8E-171 T 13-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 BEN78_16645 af00afca1cf9c71a7ff85af0bb097eda 638 SUPERFAMILY SSF48557 3 577 1.49E-163 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 BEN78_00825 1b42be13bf4a93945893d7483dd2a321 264 Gene3D G3DSA:3.30.1380.10 120 264 3.3E-36 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 BEN78_00825 1b42be13bf4a93945893d7483dd2a321 264 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 141 263 6.3E-37 T 13-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 BEN78_00825 1b42be13bf4a93945893d7483dd2a321 264 SUPERFAMILY SSF55166 135 262 3.4E-25 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 BEN78_10110 e33707a5f2c568659807becd85840853 244 PIRSF PIRSF015601 4 243 4.0E-56 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 BEN78_10110 e33707a5f2c568659807becd85840853 244 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 13 243 1.2E-56 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 BEN78_10110 e33707a5f2c568659807becd85840853 244 Gene3D G3DSA:3.40.1280.10 74 244 5.1E-58 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BEN78_10110 e33707a5f2c568659807becd85840853 244 SUPERFAMILY SSF88697 3 66 9.77E-16 T 13-10-2018 IPR015947 PUA-like superfamily BEN78_10110 e33707a5f2c568659807becd85840853 244 SUPERFAMILY SSF75217 75 243 1.78E-51 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases BEN78_10110 e33707a5f2c568659807becd85840853 244 Pfam PF04452 RNA methyltransferase 19 238 4.2E-68 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 BEN78_10110 e33707a5f2c568659807becd85840853 244 Gene3D G3DSA:2.40.240.20 1 69 2.8E-19 T 13-10-2018 BEN78_01535 4afb3bb37b9eb19f8a6ad4e0337ce8b8 240 Gene3D G3DSA:3.40.50.2300 6 136 8.4E-38 T 13-10-2018 BEN78_01535 4afb3bb37b9eb19f8a6ad4e0337ce8b8 240 Gene3D G3DSA:1.10.10.10 137 239 4.9E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_01535 4afb3bb37b9eb19f8a6ad4e0337ce8b8 240 Pfam PF00072 Response regulator receiver domain 14 122 2.7E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_01535 4afb3bb37b9eb19f8a6ad4e0337ce8b8 240 SMART SM00862 160 236 1.3E-18 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN78_01535 4afb3bb37b9eb19f8a6ad4e0337ce8b8 240 SUPERFAMILY SSF46894 137 235 1.79E-18 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BEN78_01535 4afb3bb37b9eb19f8a6ad4e0337ce8b8 240 SUPERFAMILY SSF52172 11 132 1.11E-40 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_01535 4afb3bb37b9eb19f8a6ad4e0337ce8b8 240 SMART SM00448 12 122 9.9E-41 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_01535 4afb3bb37b9eb19f8a6ad4e0337ce8b8 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 164 235 5.1E-18 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN78_09135 876b6d76a2b87131b7d6eefb193014da 121 SUPERFAMILY SSF47473 57 109 9.65E-9 T 13-10-2018 IPR011992 EF-hand domain pair BEN78_09135 876b6d76a2b87131b7d6eefb193014da 121 Pfam PF13202 EF hand 66 78 0.068 T 13-10-2018 IPR002048 EF-hand domain GO:0005509 BEN78_09135 876b6d76a2b87131b7d6eefb193014da 121 Pfam PF00036 EF hand 86 110 5.4E-6 T 13-10-2018 IPR002048 EF-hand domain GO:0005509 BEN78_09135 876b6d76a2b87131b7d6eefb193014da 121 Gene3D G3DSA:1.10.238.10 50 114 8.0E-11 T 13-10-2018 BEN78_09135 876b6d76a2b87131b7d6eefb193014da 121 SMART SM00054 84 112 0.0022 T 13-10-2018 IPR002048 EF-hand domain GO:0005509 BEN78_09135 876b6d76a2b87131b7d6eefb193014da 121 ProSitePatterns PS00018 EF-hand calcium-binding domain. 93 105 - T 13-10-2018 IPR018247 EF-Hand 1, calcium-binding site BEN78_15390 be454e2446cb48790ef0b42ebb52b630 1152 SUPERFAMILY SSF52743 123 528 1.23E-58 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BEN78_15390 be454e2446cb48790ef0b42ebb52b630 1152 SUPERFAMILY SSF51126 549 758 2.82E-9 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor BEN78_15390 be454e2446cb48790ef0b42ebb52b630 1152 PRINTS PR00723 Subtilisin serine protease family (S8) signature 230 243 1.9E-16 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN78_15390 be454e2446cb48790ef0b42ebb52b630 1152 PRINTS PR00723 Subtilisin serine protease family (S8) signature 141 160 1.9E-16 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN78_15390 be454e2446cb48790ef0b42ebb52b630 1152 PRINTS PR00723 Subtilisin serine protease family (S8) signature 466 482 1.9E-16 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN78_15390 be454e2446cb48790ef0b42ebb52b630 1152 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 467 477 - T 13-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site BEN78_15390 be454e2446cb48790ef0b42ebb52b630 1152 Pfam PF03797 Autotransporter beta-domain 880 1132 2.3E-45 T 13-10-2018 IPR005546 Autotransporter beta-domain BEN78_15390 be454e2446cb48790ef0b42ebb52b630 1152 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 234 244 - T 13-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site BEN78_15390 be454e2446cb48790ef0b42ebb52b630 1152 Pfam PF00082 Subtilase family 141 517 4.4E-40 T 13-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BEN78_15390 be454e2446cb48790ef0b42ebb52b630 1152 SUPERFAMILY SSF103515 835 1152 5.1E-52 T 13-10-2018 IPR036709 Autotransporter beta-domain superfamily BEN78_15390 be454e2446cb48790ef0b42ebb52b630 1152 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 682 1152 6.0E-38 T 13-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 BEN78_15390 be454e2446cb48790ef0b42ebb52b630 1152 SMART SM00869 877 1142 2.4E-37 T 13-10-2018 IPR005546 Autotransporter beta-domain BEN78_15390 be454e2446cb48790ef0b42ebb52b630 1152 Gene3D G3DSA:2.40.128.130 827 1152 2.8E-56 T 13-10-2018 IPR036709 Autotransporter beta-domain superfamily BEN78_13380 d5f1b350d58738643fad0a01af0e09f9 641 Gene3D G3DSA:2.130.10.10 60 529 9.3E-184 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BEN78_13380 d5f1b350d58738643fad0a01af0e09f9 641 SUPERFAMILY SSF50974 61 517 1.44E-117 T 13-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 BEN78_13380 d5f1b350d58738643fad0a01af0e09f9 641 TIGRFAM TIGR04244 nitrous_NosZ_RR: nitrous-oxide reductase, TAT-dependent 12 640 6.9E-298 T 13-10-2018 IPR023644 Nitrous-oxide reductase GO:0005507|GO:0005509|GO:0050304|GO:0055114 KEGG: 00910+1.7.2.4|MetaCyc: PWY-6748|MetaCyc: PWY-7084 BEN78_13380 d5f1b350d58738643fad0a01af0e09f9 641 Pfam PF13473 Cupredoxin-like domain 548 623 1.7E-6 T 13-10-2018 IPR028096 EfeO-type cupredoxin-like domain BEN78_13380 d5f1b350d58738643fad0a01af0e09f9 641 SUPERFAMILY SSF49503 520 640 2.68E-31 T 13-10-2018 IPR008972 Cupredoxin BEN78_13380 d5f1b350d58738643fad0a01af0e09f9 641 Gene3D G3DSA:2.60.40.420 530 640 1.8E-33 T 13-10-2018 IPR008972 Cupredoxin BEN78_14540 80a6e1b5405b2d8415904b597002b7be 131 Pfam PF02049 Flagellar hook-basal body complex protein FliE 51 130 2.6E-27 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BEN78_14540 80a6e1b5405b2d8415904b597002b7be 131 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 95 111 1.8E-10 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BEN78_14540 80a6e1b5405b2d8415904b597002b7be 131 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 60 76 1.8E-10 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BEN78_14540 80a6e1b5405b2d8415904b597002b7be 131 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 116 129 1.8E-10 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BEN78_14540 80a6e1b5405b2d8415904b597002b7be 131 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 27 131 16.551 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BEN78_14540 80a6e1b5405b2d8415904b597002b7be 131 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 59 129 3.3E-17 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BEN78_07760 8d62853846863d42ca25170cdc685337 830 Gene3D G3DSA:1.20.120.80 644 818 2.3E-18 T 13-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_07760 8d62853846863d42ca25170cdc685337 830 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 32 477 2.7E-133 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_07760 8d62853846863d42ca25170cdc685337 830 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 24 528 3.8E-209 T 13-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 BEN78_07760 8d62853846863d42ca25170cdc685337 830 Gene3D G3DSA:1.20.210.10 12 536 1.1E-173 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_07760 8d62853846863d42ca25170cdc685337 830 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 252 306 - T 13-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_07760 8d62853846863d42ca25170cdc685337 830 PRINTS PR01165 Cytochrome c oxidase subunit I signature 433 454 9.3E-79 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_07760 8d62853846863d42ca25170cdc685337 830 PRINTS PR01165 Cytochrome c oxidase subunit I signature 69 92 9.3E-79 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_07760 8d62853846863d42ca25170cdc685337 830 PRINTS PR01165 Cytochrome c oxidase subunit I signature 96 120 9.3E-79 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_07760 8d62853846863d42ca25170cdc685337 830 PRINTS PR01165 Cytochrome c oxidase subunit I signature 355 373 9.3E-79 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_07760 8d62853846863d42ca25170cdc685337 830 PRINTS PR01165 Cytochrome c oxidase subunit I signature 22 47 9.3E-79 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_07760 8d62853846863d42ca25170cdc685337 830 PRINTS PR01165 Cytochrome c oxidase subunit I signature 250 271 9.3E-79 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_07760 8d62853846863d42ca25170cdc685337 830 PRINTS PR01165 Cytochrome c oxidase subunit I signature 296 311 9.3E-79 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_07760 8d62853846863d42ca25170cdc685337 830 PRINTS PR01165 Cytochrome c oxidase subunit I signature 199 218 9.3E-79 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_07760 8d62853846863d42ca25170cdc685337 830 PRINTS PR01165 Cytochrome c oxidase subunit I signature 170 188 9.3E-79 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_07760 8d62853846863d42ca25170cdc685337 830 PRINTS PR01165 Cytochrome c oxidase subunit I signature 320 341 9.3E-79 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_07760 8d62853846863d42ca25170cdc685337 830 PRINTS PR01165 Cytochrome c oxidase subunit I signature 138 150 9.3E-79 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_07760 8d62853846863d42ca25170cdc685337 830 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 402 9.3E-79 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_07760 8d62853846863d42ca25170cdc685337 830 SUPERFAMILY SSF81442 21 528 1.57E-156 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_07760 8d62853846863d42ca25170cdc685337 830 SUPERFAMILY SSF81452 574 810 2.88E-22 T 13-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_10025 377ecf1ef444d4db1ed86fce86b7be8d 705 SUPERFAMILY SSF53756 345 694 7.53E-24 T 13-10-2018 BEN78_10025 377ecf1ef444d4db1ed86fce86b7be8d 705 Gene3D G3DSA:3.90.550.10 68 294 4.2E-49 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_10025 377ecf1ef444d4db1ed86fce86b7be8d 705 Pfam PF00535 Glycosyl transferase family 2 75 233 7.3E-25 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BEN78_10025 377ecf1ef444d4db1ed86fce86b7be8d 705 Pfam PF13692 Glycosyl transferases group 1 526 663 1.3E-26 T 13-10-2018 BEN78_10025 377ecf1ef444d4db1ed86fce86b7be8d 705 SUPERFAMILY SSF53448 69 304 6.28E-52 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_10025 377ecf1ef444d4db1ed86fce86b7be8d 705 Gene3D G3DSA:3.40.50.2000 523 681 5.0E-18 T 13-10-2018 BEN78_06310 f83ef4f4d063b2d9dffd031eaed2696b 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 205 1.9E-16 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_06310 f83ef4f4d063b2d9dffd031eaed2696b 212 SMART SM00421 149 206 2.2E-19 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_06310 f83ef4f4d063b2d9dffd031eaed2696b 212 SUPERFAMILY SSF52172 4 178 2.42E-34 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_06310 f83ef4f4d063b2d9dffd031eaed2696b 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 8.2E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_06310 f83ef4f4d063b2d9dffd031eaed2696b 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 8.2E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_06310 f83ef4f4d063b2d9dffd031eaed2696b 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 8.2E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_06310 f83ef4f4d063b2d9dffd031eaed2696b 212 SMART SM00448 6 118 1.4E-32 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_06310 f83ef4f4d063b2d9dffd031eaed2696b 212 Gene3D G3DSA:3.40.50.12740 6 212 1.8E-62 T 13-10-2018 BEN78_06310 f83ef4f4d063b2d9dffd031eaed2696b 212 Pfam PF00072 Response regulator receiver domain 8 118 3.8E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_06310 f83ef4f4d063b2d9dffd031eaed2696b 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 166 193 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_15080 26868d073b3342b6332cdab7c2e08721 423 Pfam PF00464 Serine hydroxymethyltransferase 9 386 5.6E-171 T 13-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 BEN78_15080 26868d073b3342b6332cdab7c2e08721 423 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 423 51.603 T 13-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 BEN78_15080 26868d073b3342b6332cdab7c2e08721 423 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 13-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 BEN78_15080 26868d073b3342b6332cdab7c2e08721 423 PIRSF PIRSF000412 2 422 2.0E-163 T 13-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 BEN78_15080 26868d073b3342b6332cdab7c2e08721 423 Gene3D G3DSA:3.40.640.10 37 290 1.7E-180 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN78_15080 26868d073b3342b6332cdab7c2e08721 423 Gene3D G3DSA:3.90.1150.10 10 395 1.7E-180 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN78_15080 26868d073b3342b6332cdab7c2e08721 423 SUPERFAMILY SSF53383 6 422 1.03E-174 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_08465 53f95918de4489aa445eb33963f70cd5 449 SUPERFAMILY SSF51735 203 448 9.55E-72 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_08465 53f95918de4489aa445eb33963f70cd5 449 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 123 136 - T 13-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BEN78_08465 53f95918de4489aa445eb33963f70cd5 449 Gene3D G3DSA:3.40.50.720 210 374 2.3E-162 T 13-10-2018 BEN78_08465 53f95918de4489aa445eb33963f70cd5 449 SUPERFAMILY SSF53223 9 197 2.08E-72 T 13-10-2018 BEN78_08465 53f95918de4489aa445eb33963f70cd5 449 Gene3D G3DSA:1.10.285.10 387 449 4.9E-10 T 13-10-2018 BEN78_08465 53f95918de4489aa445eb33963f70cd5 449 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 236 256 3.8E-32 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BEN78_08465 53f95918de4489aa445eb33963f70cd5 449 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 115 129 3.8E-32 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BEN78_08465 53f95918de4489aa445eb33963f70cd5 449 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 194 216 3.8E-32 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BEN78_08465 53f95918de4489aa445eb33963f70cd5 449 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 373 384 3.8E-32 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BEN78_08465 53f95918de4489aa445eb33963f70cd5 449 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 203 447 3.0E-82 T 13-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BEN78_08465 53f95918de4489aa445eb33963f70cd5 449 Gene3D G3DSA:1.10.285.10 9 385 2.3E-162 T 13-10-2018 BEN78_08465 53f95918de4489aa445eb33963f70cd5 449 PIRSF PIRSF000185 23 449 3.6E-113 T 13-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 BEN78_08465 53f95918de4489aa445eb33963f70cd5 449 SMART SM00839 205 447 3.6E-80 T 13-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BEN78_08465 53f95918de4489aa445eb33963f70cd5 449 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 58 183 8.4E-51 T 13-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BEN78_08465 53f95918de4489aa445eb33963f70cd5 449 Gene3D G3DSA:3.40.50.10860 56 191 2.3E-162 T 13-10-2018 BEN78_02215 a5ff4cfbb84a9da3bf968a2364b4a233 411 Pfam PF00266 Aminotransferase class-V 31 399 6.2E-141 T 13-10-2018 IPR000192 Aminotransferase class V domain BEN78_02215 a5ff4cfbb84a9da3bf968a2364b4a233 411 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 222 241 - T 13-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BEN78_02215 a5ff4cfbb84a9da3bf968a2364b4a233 411 SUPERFAMILY SSF53383 10 408 1.61E-126 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_02215 a5ff4cfbb84a9da3bf968a2364b4a233 411 Gene3D G3DSA:3.40.640.10 42 301 1.2E-163 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN78_02215 a5ff4cfbb84a9da3bf968a2364b4a233 411 Gene3D G3DSA:3.90.1150.10 14 403 1.2E-163 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN78_02215 a5ff4cfbb84a9da3bf968a2364b4a233 411 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 13 410 1.6E-172 T 13-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 BEN78_10880 6236b5f264b04b7b785183bac585dc23 82 Gene3D G3DSA:3.30.300.90 1 75 2.8E-30 T 13-10-2018 BEN78_10880 6236b5f264b04b7b785183bac585dc23 82 PIRSF PIRSF003113 2 82 5.1E-21 T 13-10-2018 IPR002634 BolA protein BEN78_10880 6236b5f264b04b7b785183bac585dc23 82 Pfam PF01722 BolA-like protein 19 74 5.4E-18 T 13-10-2018 IPR002634 BolA protein BEN78_10880 6236b5f264b04b7b785183bac585dc23 82 SUPERFAMILY SSF82657 4 79 4.58E-24 T 13-10-2018 IPR036065 BolA-like superfamily BEN78_11120 047fbc5893f8d12759b1dae5d75d6d3a 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 6.1E-48 T 13-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 BEN78_11120 047fbc5893f8d12759b1dae5d75d6d3a 137 Gene3D G3DSA:3.90.1170.10 1 137 1.8E-56 T 13-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 BEN78_11120 047fbc5893f8d12759b1dae5d75d6d3a 137 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 13-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_11120 047fbc5893f8d12759b1dae5d75d6d3a 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 2.6E-38 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_11120 047fbc5893f8d12759b1dae5d75d6d3a 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 2.6E-38 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_11120 047fbc5893f8d12759b1dae5d75d6d3a 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 2.6E-38 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_11120 047fbc5893f8d12759b1dae5d75d6d3a 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 2.6E-38 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_11120 047fbc5893f8d12759b1dae5d75d6d3a 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 37.478 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_11120 047fbc5893f8d12759b1dae5d75d6d3a 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 2.1E-56 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_11120 047fbc5893f8d12759b1dae5d75d6d3a 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 13-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_11120 047fbc5893f8d12759b1dae5d75d6d3a 137 SUPERFAMILY SSF54686 1 134 3.92E-53 T 13-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 BEN78_08030 92dad7496997515cd6c60e12a766d0aa 726 Gene3D G3DSA:1.10.486.10 382 540 5.7E-123 T 13-10-2018 BEN78_08030 92dad7496997515cd6c60e12a766d0aa 726 Gene3D G3DSA:3.40.50.300 281 638 5.7E-123 T 13-10-2018 BEN78_08030 92dad7496997515cd6c60e12a766d0aa 726 Gene3D G3DSA:1.10.10.160 114 187 7.4E-93 T 13-10-2018 IPR013986 DExx box DNA helicase domain superfamily BEN78_08030 92dad7496997515cd6c60e12a766d0aa 726 Pfam PF13361 UvrD-like helicase C-terminal domain 277 618 1.5E-71 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 BEN78_08030 92dad7496997515cd6c60e12a766d0aa 726 SUPERFAMILY SSF52540 6 644 1.06E-174 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_08030 92dad7496997515cd6c60e12a766d0aa 726 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 723 0.0 T 13-10-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 BEN78_08030 92dad7496997515cd6c60e12a766d0aa 726 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 271 9.3E-66 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 BEN78_08030 92dad7496997515cd6c60e12a766d0aa 726 Gene3D G3DSA:3.40.50.300 10 274 7.4E-93 T 13-10-2018 BEN78_12505 ebb5bd97e6deee79c33277b36a41cb80 220 SUPERFAMILY SSF52172 1 118 8.11E-35 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_12505 ebb5bd97e6deee79c33277b36a41cb80 220 Gene3D G3DSA:3.40.50.2300 1 118 7.8E-37 T 13-10-2018 BEN78_12505 ebb5bd97e6deee79c33277b36a41cb80 220 Pfam PF00072 Response regulator receiver domain 3 112 3.4E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_12505 ebb5bd97e6deee79c33277b36a41cb80 220 SUPERFAMILY SSF46894 118 217 3.68E-25 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BEN78_12505 ebb5bd97e6deee79c33277b36a41cb80 220 SMART SM00448 1 112 2.0E-33 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_12505 ebb5bd97e6deee79c33277b36a41cb80 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 7.7E-22 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN78_12505 ebb5bd97e6deee79c33277b36a41cb80 220 Gene3D G3DSA:1.10.10.10 119 219 1.4E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_12505 ebb5bd97e6deee79c33277b36a41cb80 220 SMART SM00862 145 216 1.3E-24 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN78_06305 4a7ddff86eb16090d332e8267d642f0d 342 Gene3D G3DSA:3.40.50.720 152 289 1.7E-135 T 13-10-2018 BEN78_06305 4a7ddff86eb16090d332e8267d642f0d 342 SUPERFAMILY SSF50129 3 338 2.28E-55 T 13-10-2018 IPR011032 GroES-like superfamily BEN78_06305 4a7ddff86eb16090d332e8267d642f0d 342 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 13-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 BEN78_06305 4a7ddff86eb16090d332e8267d642f0d 342 SMART SM00829 14 338 1.7E-6 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BEN78_06305 4a7ddff86eb16090d332e8267d642f0d 342 SUPERFAMILY SSF51735 143 308 9.57E-45 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_06305 4a7ddff86eb16090d332e8267d642f0d 342 Pfam PF00107 Zinc-binding dehydrogenase 179 304 1.2E-27 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BEN78_06305 4a7ddff86eb16090d332e8267d642f0d 342 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 134 2.2E-33 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BEN78_06305 4a7ddff86eb16090d332e8267d642f0d 342 Gene3D G3DSA:3.90.180.10 14 335 1.7E-135 T 13-10-2018 BEN78_07175 33e8032e51936598307d13801a844f9d 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 159 3.1E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_07175 33e8032e51936598307d13801a844f9d 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 67 78 3.1E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_07175 33e8032e51936598307d13801a844f9d 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 120 128 3.1E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_07175 33e8032e51936598307d13801a844f9d 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.0E-20 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_07175 33e8032e51936598307d13801a844f9d 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 159 2.0E-20 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_07175 33e8032e51936598307d13801a844f9d 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 178 2.0E-20 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_07175 33e8032e51936598307d13801a844f9d 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 67 78 2.0E-20 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_07175 33e8032e51936598307d13801a844f9d 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 114 130 2.0E-20 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_07175 33e8032e51936598307d13801a844f9d 249 SUPERFAMILY SSF51735 2 236 8.69E-57 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_07175 33e8032e51936598307d13801a844f9d 249 Pfam PF00106 short chain dehydrogenase 3 182 6.6E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_07175 33e8032e51936598307d13801a844f9d 249 Gene3D G3DSA:3.40.50.720 2 248 6.8E-59 T 13-10-2018 BEN78_08895 ef2eb05a39e4785b870df8403172777e 328 Gene3D G3DSA:2.40.10.340 113 259 1.1E-30 T 13-10-2018 BEN78_08895 ef2eb05a39e4785b870df8403172777e 328 PIRSF PIRSF038471 1 274 9.9E-62 T 13-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 BEN78_08895 ef2eb05a39e4785b870df8403172777e 328 Pfam PF04085 rod shape-determining protein MreC 115 261 6.9E-32 T 13-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 BEN78_08895 ef2eb05a39e4785b870df8403172777e 328 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 4 265 5.3E-53 T 13-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 BEN78_08895 ef2eb05a39e4785b870df8403172777e 328 Gene3D G3DSA:2.40.10.350 172 249 1.1E-30 T 13-10-2018 BEN78_08205 c8f145deaceff211b3f97cf1c88b60f9 894 Gene3D G3DSA:1.10.287.130 644 717 9.1E-16 T 13-10-2018 BEN78_08205 c8f145deaceff211b3f97cf1c88b60f9 894 Gene3D G3DSA:3.40.50.300 20 229 3.7E-94 T 13-10-2018 BEN78_08205 c8f145deaceff211b3f97cf1c88b60f9 894 Pfam PF00582 Universal stress protein family 249 360 4.7E-8 T 13-10-2018 IPR006016 UspA BEN78_08205 c8f145deaceff211b3f97cf1c88b60f9 894 SMART SM00388 650 718 3.3E-13 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_08205 c8f145deaceff211b3f97cf1c88b60f9 894 Gene3D G3DSA:3.30.450.40 505 643 3.0E-20 T 13-10-2018 IPR029016 GAF-like domain superfamily BEN78_08205 c8f145deaceff211b3f97cf1c88b60f9 894 Pfam PF13493 Domain of unknown function (DUF4118) 396 497 1.3E-22 T 13-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain BEN78_08205 c8f145deaceff211b3f97cf1c88b60f9 894 Pfam PF00512 His Kinase A (phospho-acceptor) domain 652 717 8.9E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_08205 c8f145deaceff211b3f97cf1c88b60f9 894 SUPERFAMILY SSF47384 646 718 2.75E-13 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN78_08205 c8f145deaceff211b3f97cf1c88b60f9 894 Gene3D G3DSA:3.30.565.10 726 886 8.2E-32 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_08205 c8f145deaceff211b3f97cf1c88b60f9 894 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 23 230 3.0E-90 T 13-10-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 BEN78_08205 c8f145deaceff211b3f97cf1c88b60f9 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 825 835 3.3E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_08205 c8f145deaceff211b3f97cf1c88b60f9 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 866 879 3.3E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_08205 c8f145deaceff211b3f97cf1c88b60f9 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 807 821 3.3E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_08205 c8f145deaceff211b3f97cf1c88b60f9 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 841 859 3.3E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_08205 c8f145deaceff211b3f97cf1c88b60f9 894 Gene3D G3DSA:3.40.50.620 233 371 1.2E-11 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_08205 c8f145deaceff211b3f97cf1c88b60f9 894 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 766 881 7.8E-16 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_08205 c8f145deaceff211b3f97cf1c88b60f9 894 Gene3D G3DSA:1.20.120.620 390 495 9.1E-23 T 13-10-2018 IPR038318 KdpD, transmembrane domain superfamily BEN78_08205 c8f145deaceff211b3f97cf1c88b60f9 894 SUPERFAMILY SSF52402 250 362 1.84E-11 T 13-10-2018 BEN78_08205 c8f145deaceff211b3f97cf1c88b60f9 894 SUPERFAMILY SSF55874 708 885 3.41E-35 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_08205 c8f145deaceff211b3f97cf1c88b60f9 894 SMART SM00387 762 882 3.5E-30 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_08205 c8f145deaceff211b3f97cf1c88b60f9 894 SUPERFAMILY SSF52540 27 145 2.25E-6 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_01980 892316e23eccb6055aa04f3a18ebdcb7 296 SUPERFAMILY SSF53955 161 291 3.75E-47 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily BEN78_01980 892316e23eccb6055aa04f3a18ebdcb7 296 Pfam PF01464 Transglycosylase SLT domain 173 269 5.5E-29 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 BEN78_01980 892316e23eccb6055aa04f3a18ebdcb7 296 Gene3D G3DSA:1.10.530.10 158 292 2.5E-44 T 13-10-2018 BEN78_01980 892316e23eccb6055aa04f3a18ebdcb7 296 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 188 216 - T 13-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 BEN78_14645 5c51d3b778e62bec62671609e9e52f94 135 PIRSF PIRSF002889 1 135 1.2E-32 T 13-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 BEN78_14645 5c51d3b778e62bec62671609e9e52f94 135 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 8 132 4.5E-26 T 13-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 BEN78_14645 5c51d3b778e62bec62671609e9e52f94 135 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site BEN78_14645 5c51d3b778e62bec62671609e9e52f94 135 Pfam PF00460 Flagella basal body rod protein 15 39 2.6E-7 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BEN78_02480 99e42635a594fb590e5ab44814442a66 145 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 4 137 1.6E-41 T 13-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L BEN78_02480 99e42635a594fb590e5ab44814442a66 145 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 139 22.612 T 13-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 BEN78_02480 99e42635a594fb590e5ab44814442a66 145 Gene3D G3DSA:1.10.1200.120 3 141 1.7E-38 T 13-10-2018 IPR036019 Gated mechanosensitive channel BEN78_02480 99e42635a594fb590e5ab44814442a66 145 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 2.8E-12 T 13-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 BEN78_02480 99e42635a594fb590e5ab44814442a66 145 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 89 97 2.8E-12 T 13-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 BEN78_02480 99e42635a594fb590e5ab44814442a66 145 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 98 107 2.8E-12 T 13-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 BEN78_02480 99e42635a594fb590e5ab44814442a66 145 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 4 138 1.8E-41 T 13-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 BEN78_02480 99e42635a594fb590e5ab44814442a66 145 SUPERFAMILY SSF81330 13 134 9.29E-33 T 13-10-2018 IPR036019 Gated mechanosensitive channel BEN78_02480 99e42635a594fb590e5ab44814442a66 145 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 13-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site BEN78_03315 a0f6862b475436435ae37ef7744dca5f 313 Pfam PF01012 Electron transfer flavoprotein domain 4 175 3.0E-27 T 13-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 BEN78_03315 a0f6862b475436435ae37ef7744dca5f 313 Gene3D G3DSA:3.40.50.620 3 185 1.5E-41 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_03315 a0f6862b475436435ae37ef7744dca5f 313 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 257 283 - T 13-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 BEN78_03315 a0f6862b475436435ae37ef7744dca5f 313 SMART SM00893 4 186 1.2E-33 T 13-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 BEN78_03315 a0f6862b475436435ae37ef7744dca5f 313 Gene3D G3DSA:3.40.50.1220 188 313 6.4E-54 T 13-10-2018 BEN78_03315 a0f6862b475436435ae37ef7744dca5f 313 SUPERFAMILY SSF52467 193 311 1.28E-46 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily BEN78_03315 a0f6862b475436435ae37ef7744dca5f 313 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 194 276 3.4E-35 T 13-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 BEN78_03315 a0f6862b475436435ae37ef7744dca5f 313 SUPERFAMILY SSF52402 3 177 2.93E-39 T 13-10-2018 BEN78_03315 a0f6862b475436435ae37ef7744dca5f 313 PIRSF PIRSF000089 1 313 2.5E-102 T 13-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 BEN78_01005 ccb5e888e0d63da1c9b6b7f615bce4f8 1176 Gene3D G3DSA:3.20.20.140 1 265 4.0E-84 T 13-10-2018 BEN78_01005 ccb5e888e0d63da1c9b6b7f615bce4f8 1176 Gene3D G3DSA:1.10.10.1600 427 515 1.3E-25 T 13-10-2018 BEN78_01005 ccb5e888e0d63da1c9b6b7f615bce4f8 1176 SUPERFAMILY SSF50249 1007 1071 9.42E-5 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN78_01005 ccb5e888e0d63da1c9b6b7f615bce4f8 1176 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 5 1043 0.0 T 13-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN78_01005 ccb5e888e0d63da1c9b6b7f615bce4f8 1176 SMART SM00481 6 73 1.9E-25 T 13-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal BEN78_01005 ccb5e888e0d63da1c9b6b7f615bce4f8 1176 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 288 739 3.1E-171 T 13-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN78_01005 ccb5e888e0d63da1c9b6b7f615bce4f8 1176 SUPERFAMILY SSF89550 5 257 1.94E-16 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 BEN78_01005 ccb5e888e0d63da1c9b6b7f615bce4f8 1176 Pfam PF02811 PHP domain 7 166 9.9E-30 T 13-10-2018 IPR004013 PHP domain GO:0003824 BEN78_01005 ccb5e888e0d63da1c9b6b7f615bce4f8 1176 Pfam PF14579 Helix-hairpin-helix motif 812 901 1.9E-28 T 13-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN78_08845 266541347d5f49ae4bcdfb2cc687a14a 661 Gene3D G3DSA:1.10.1740.60 245 341 1.2E-42 T 13-10-2018 BEN78_08845 266541347d5f49ae4bcdfb2cc687a14a 661 Pfam PF01433 Peptidase family M1 domain 254 465 1.4E-43 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BEN78_08845 266541347d5f49ae4bcdfb2cc687a14a 661 Gene3D G3DSA:1.25.40.320 498 638 4.9E-44 T 13-10-2018 IPR038502 Peptidase M1 LTA-4 hydrolase/aminopeptidase, C-terminal domain superfamily BEN78_08845 266541347d5f49ae4bcdfb2cc687a14a 661 Gene3D G3DSA:1.10.390.10 342 497 5.5E-41 T 13-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily BEN78_08845 266541347d5f49ae4bcdfb2cc687a14a 661 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 329 344 4.9E-14 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BEN78_08845 266541347d5f49ae4bcdfb2cc687a14a 661 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 348 360 4.9E-14 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BEN78_08845 266541347d5f49ae4bcdfb2cc687a14a 661 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 183 198 4.9E-14 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BEN78_08845 266541347d5f49ae4bcdfb2cc687a14a 661 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 228 243 4.9E-14 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BEN78_08845 266541347d5f49ae4bcdfb2cc687a14a 661 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 302 312 4.9E-14 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BEN78_08845 266541347d5f49ae4bcdfb2cc687a14a 661 SUPERFAMILY SSF48371 503 637 2.13E-37 T 13-10-2018 IPR016024 Armadillo-type fold BEN78_08845 266541347d5f49ae4bcdfb2cc687a14a 661 SMART SM01263 498 637 1.5E-44 T 13-10-2018 IPR015211 Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal GO:0008237|GO:0008270 BEN78_08845 266541347d5f49ae4bcdfb2cc687a14a 661 SUPERFAMILY SSF55486 251 490 1.78E-62 T 13-10-2018 BEN78_08845 266541347d5f49ae4bcdfb2cc687a14a 661 Pfam PF09127 Leukotriene A4 hydrolase, C-terminal 526 636 2.1E-27 T 13-10-2018 IPR015211 Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal GO:0008237|GO:0008270 BEN78_08845 266541347d5f49ae4bcdfb2cc687a14a 661 SUPERFAMILY SSF63737 48 245 7.06E-38 T 13-10-2018 BEN78_08845 266541347d5f49ae4bcdfb2cc687a14a 661 Gene3D G3DSA:2.60.40.1730 59 244 1.9E-58 T 13-10-2018 BEN78_10715 06162ac8cd34b50ea69860618946e516 269 Pfam PF03308 ArgK protein 11 64 2.8E-5 T 13-10-2018 BEN78_10715 06162ac8cd34b50ea69860618946e516 269 SUPERFAMILY SSF52540 26 257 1.78E-16 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_10715 06162ac8cd34b50ea69860618946e516 269 Gene3D G3DSA:3.40.50.300 9 267 1.2E-62 T 13-10-2018 BEN78_12480 ecba5370fdbee128c14cb8691f8eeef3 175 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 12 175 22.839 T 13-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 BEN78_12480 ecba5370fdbee128c14cb8691f8eeef3 175 Gene3D G3DSA:2.30.30.240 106 175 4.5E-24 T 13-10-2018 BEN78_12480 ecba5370fdbee128c14cb8691f8eeef3 175 Gene3D G3DSA:2.40.30.60 2 100 2.1E-27 T 13-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 BEN78_12480 ecba5370fdbee128c14cb8691f8eeef3 175 Pfam PF05239 PRC-barrel domain 104 172 4.6E-7 T 13-10-2018 IPR027275 PRC-barrel domain BEN78_12480 ecba5370fdbee128c14cb8691f8eeef3 175 SUPERFAMILY SSF50447 12 100 1.52E-18 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BEN78_12480 ecba5370fdbee128c14cb8691f8eeef3 175 SUPERFAMILY SSF50346 106 175 8.83E-18 T 13-10-2018 IPR011033 PRC-barrel-like superfamily BEN78_12480 ecba5370fdbee128c14cb8691f8eeef3 175 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 12 174 6.9E-48 T 13-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 BEN78_12480 ecba5370fdbee128c14cb8691f8eeef3 175 Pfam PF01782 RimM N-terminal domain 14 97 5.6E-22 T 13-10-2018 IPR002676 RimM, N-terminal GO:0006364 BEN78_13475 00af5aaadef26c261458a05e32fe1ddb 325 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 14 320 2.0E-102 T 13-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 BEN78_13475 00af5aaadef26c261458a05e32fe1ddb 325 SUPERFAMILY SSF55681 10 320 3.68E-62 T 13-10-2018 BEN78_13475 00af5aaadef26c261458a05e32fe1ddb 325 Pfam PF00152 tRNA synthetases class II (D, K and N) 12 320 1.0E-35 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN78_13475 00af5aaadef26c261458a05e32fe1ddb 325 Gene3D G3DSA:3.30.930.10 3 325 6.9E-84 T 13-10-2018 BEN78_10235 8b71b0768fe729b9c458cc741d021d61 127 SUPERFAMILY SSF110069 8 127 1.15E-49 T 13-10-2018 IPR036767 ApaG domain superfamily BEN78_10235 8b71b0768fe729b9c458cc741d021d61 127 Gene3D G3DSA:2.60.40.1470 1 127 4.0E-49 T 13-10-2018 IPR036767 ApaG domain superfamily BEN78_10235 8b71b0768fe729b9c458cc741d021d61 127 Pfam PF04379 ApaG domain 20 104 4.5E-36 T 13-10-2018 IPR007474 ApaG domain BEN78_10235 8b71b0768fe729b9c458cc741d021d61 127 Hamap MF_00791 Protein ApaG [apaG]. 2 127 34.605 T 13-10-2018 IPR023065 Uncharacterised protein family ApaG BEN78_09050 dd4f311a5644064d0ad4a1ed51227199 474 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 58 469 2.0E-128 T 13-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 BEN78_09050 dd4f311a5644064d0ad4a1ed51227199 474 SUPERFAMILY SSF50156 267 372 5.13E-20 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 BEN78_09050 dd4f311a5644064d0ad4a1ed51227199 474 Gene3D G3DSA:2.30.42.10 279 381 2.7E-23 T 13-10-2018 BEN78_09050 dd4f311a5644064d0ad4a1ed51227199 474 SMART SM00228 388 466 0.04 T 13-10-2018 IPR001478 PDZ domain GO:0005515 BEN78_09050 dd4f311a5644064d0ad4a1ed51227199 474 SMART SM00228 299 366 2.7E-10 T 13-10-2018 IPR001478 PDZ domain GO:0005515 BEN78_09050 dd4f311a5644064d0ad4a1ed51227199 474 SUPERFAMILY SSF50494 56 279 1.09E-60 T 13-10-2018 IPR009003 Peptidase S1, PA clan BEN78_09050 dd4f311a5644064d0ad4a1ed51227199 474 PRINTS PR00834 HtrA/DegQ protease family signature 213 230 9.2E-52 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BEN78_09050 dd4f311a5644064d0ad4a1ed51227199 474 PRINTS PR00834 HtrA/DegQ protease family signature 178 202 9.2E-52 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BEN78_09050 dd4f311a5644064d0ad4a1ed51227199 474 PRINTS PR00834 HtrA/DegQ protease family signature 117 129 9.2E-52 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BEN78_09050 dd4f311a5644064d0ad4a1ed51227199 474 PRINTS PR00834 HtrA/DegQ protease family signature 138 158 9.2E-52 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BEN78_09050 dd4f311a5644064d0ad4a1ed51227199 474 PRINTS PR00834 HtrA/DegQ protease family signature 235 252 9.2E-52 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BEN78_09050 dd4f311a5644064d0ad4a1ed51227199 474 PRINTS PR00834 HtrA/DegQ protease family signature 324 336 9.2E-52 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BEN78_09050 dd4f311a5644064d0ad4a1ed51227199 474 Pfam PF13365 Trypsin-like peptidase domain 107 242 3.8E-31 T 13-10-2018 BEN78_09050 dd4f311a5644064d0ad4a1ed51227199 474 SUPERFAMILY SSF50156 390 473 1.2E-10 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 BEN78_09050 dd4f311a5644064d0ad4a1ed51227199 474 Gene3D G3DSA:2.40.10.120 56 277 1.2E-75 T 13-10-2018 BEN78_09050 dd4f311a5644064d0ad4a1ed51227199 474 Gene3D G3DSA:2.30.42.10 386 473 1.3E-13 T 13-10-2018 BEN78_09050 dd4f311a5644064d0ad4a1ed51227199 474 Pfam PF13180 PDZ domain 286 374 4.8E-12 T 13-10-2018 IPR001478 PDZ domain GO:0005515 BEN78_10835 6711ea46bb963f7fd434411124e16cf6 319 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 4 317 34.639 T 13-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 BEN78_10835 6711ea46bb963f7fd434411124e16cf6 319 Gene3D G3DSA:3.40.50.300 135 318 2.8E-58 T 13-10-2018 BEN78_10835 6711ea46bb963f7fd434411124e16cf6 319 Gene3D G3DSA:3.40.1390.20 10 134 1.6E-23 T 13-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily BEN78_10835 6711ea46bb963f7fd434411124e16cf6 319 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 13 312 4.6E-95 T 13-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 BEN78_10835 6711ea46bb963f7fd434411124e16cf6 319 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 154 167 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BEN78_10835 6711ea46bb963f7fd434411124e16cf6 319 Pfam PF02603 HPr Serine kinase N terminus 7 132 1.5E-22 T 13-10-2018 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 BEN78_10835 6711ea46bb963f7fd434411124e16cf6 319 SUPERFAMILY SSF53795 137 308 1.31E-31 T 13-10-2018 BEN78_10835 6711ea46bb963f7fd434411124e16cf6 319 SUPERFAMILY SSF75138 10 136 1.07E-28 T 13-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily BEN78_10835 6711ea46bb963f7fd434411124e16cf6 319 Pfam PF07475 HPr Serine kinase C-terminal domain 136 309 5.1E-54 T 13-10-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 BEN78_12585 68a7f89a86591e9bdbbde468273fb53d 191 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 5 190 1.6E-46 T 13-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 BEN78_12585 68a7f89a86591e9bdbbde468273fb53d 191 Pfam PF00692 dUTPase 79 186 4.7E-7 T 13-10-2018 IPR029054 dUTPase-like BEN78_12585 68a7f89a86591e9bdbbde468273fb53d 191 Gene3D G3DSA:2.70.40.10 1 161 1.5E-51 T 13-10-2018 IPR036157 dUTPase-like superfamily BEN78_12585 68a7f89a86591e9bdbbde468273fb53d 191 SUPERFAMILY SSF51283 3 190 3.4E-52 T 13-10-2018 IPR036157 dUTPase-like superfamily BEN78_12585 68a7f89a86591e9bdbbde468273fb53d 191 Hamap MF_00146 dCTP deaminase [dcd]. 1 191 27.557 T 13-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 BEN78_08890 a413fd77cb38d1ec9faf362bc28eb5b7 346 Gene3D G3DSA:3.30.420.40 158 321 6.9E-129 T 13-10-2018 BEN78_08890 a413fd77cb38d1ec9faf362bc28eb5b7 346 Pfam PF06723 MreB/Mbl protein 11 337 1.8E-146 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BEN78_08890 a413fd77cb38d1ec9faf362bc28eb5b7 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 6.5E-61 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BEN78_08890 a413fd77cb38d1ec9faf362bc28eb5b7 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 6.5E-61 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BEN78_08890 a413fd77cb38d1ec9faf362bc28eb5b7 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 6.5E-61 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BEN78_08890 a413fd77cb38d1ec9faf362bc28eb5b7 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 6.5E-61 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BEN78_08890 a413fd77cb38d1ec9faf362bc28eb5b7 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 6.5E-61 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BEN78_08890 a413fd77cb38d1ec9faf362bc28eb5b7 346 Gene3D G3DSA:3.90.640.10 190 263 6.9E-129 T 13-10-2018 BEN78_08890 a413fd77cb38d1ec9faf362bc28eb5b7 346 Gene3D G3DSA:3.30.420.40 14 331 6.9E-129 T 13-10-2018 BEN78_08890 a413fd77cb38d1ec9faf362bc28eb5b7 346 SUPERFAMILY SSF53067 154 339 4.11E-48 T 13-10-2018 BEN78_08890 a413fd77cb38d1ec9faf362bc28eb5b7 346 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 1.4E-157 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BEN78_08890 a413fd77cb38d1ec9faf362bc28eb5b7 346 SUPERFAMILY SSF53067 9 152 4.17E-37 T 13-10-2018 BEN78_16810 0cfada243f1abf2239f1384e58df98a1 779 Gene3D G3DSA:3.40.50.1820 499 762 5.1E-51 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_16810 0cfada243f1abf2239f1384e58df98a1 779 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 169 471 3.7E-53 T 13-10-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 BEN78_16810 0cfada243f1abf2239f1384e58df98a1 779 Pfam PF00326 Prolyl oligopeptidase family 566 763 4.6E-51 T 13-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 BEN78_16810 0cfada243f1abf2239f1384e58df98a1 779 Gene3D G3DSA:2.140.10.30 99 496 1.1E-71 T 13-10-2018 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily BEN78_16810 0cfada243f1abf2239f1384e58df98a1 779 SUPERFAMILY SSF82171 45 502 9.29E-36 T 13-10-2018 BEN78_16810 0cfada243f1abf2239f1384e58df98a1 779 SUPERFAMILY SSF53474 501 763 2.88E-53 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_13565 1a64a3bd87503aeb6ba25abc3c691916 946 Gene3D G3DSA:3.40.50.12470 560 806 9.7E-161 T 13-10-2018 BEN78_13565 1a64a3bd87503aeb6ba25abc3c691916 946 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 795 935 9.7E-51 T 13-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 BEN78_13565 1a64a3bd87503aeb6ba25abc3c691916 946 Pfam PF02779 Transketolase, pyrimidine binding domain 598 791 2.8E-62 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BEN78_13565 1a64a3bd87503aeb6ba25abc3c691916 946 PIRSF PIRSF000157 2 937 0.0 T 13-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 BEN78_13565 1a64a3bd87503aeb6ba25abc3c691916 946 SMART SM00861 597 790 2.5E-57 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BEN78_13565 1a64a3bd87503aeb6ba25abc3c691916 946 SUPERFAMILY SSF52518 120 522 4.3E-88 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold BEN78_13565 1a64a3bd87503aeb6ba25abc3c691916 946 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 11 48 7.2E-13 T 13-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 BEN78_13565 1a64a3bd87503aeb6ba25abc3c691916 946 Gene3D G3DSA:1.10.287.1150 82 162 2.7E-20 T 13-10-2018 BEN78_13565 1a64a3bd87503aeb6ba25abc3c691916 946 Gene3D G3DSA:3.40.50.970 164 529 5.5E-147 T 13-10-2018 BEN78_13565 1a64a3bd87503aeb6ba25abc3c691916 946 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 935 0.0 T 13-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 BEN78_13565 1a64a3bd87503aeb6ba25abc3c691916 946 Pfam PF00676 Dehydrogenase E1 component 211 518 2.0E-49 T 13-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 BEN78_13565 1a64a3bd87503aeb6ba25abc3c691916 946 SUPERFAMILY SSF52518 580 797 5.0E-51 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold BEN78_13565 1a64a3bd87503aeb6ba25abc3c691916 946 Gene3D G3DSA:3.40.50.11610 727 932 9.7E-161 T 13-10-2018 BEN78_04900 834acc8f44d1eb65ad7d1d4d0284a4f6 1075 Gene3D G3DSA:3.40.605.10 585 1057 2.9E-150 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BEN78_04900 834acc8f44d1eb65ad7d1d4d0284a4f6 1075 SUPERFAMILY SSF53720 593 1060 8.64E-123 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BEN78_04900 834acc8f44d1eb65ad7d1d4d0284a4f6 1075 Gene3D G3DSA:3.40.309.10 832 1024 2.9E-150 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BEN78_04900 834acc8f44d1eb65ad7d1d4d0284a4f6 1075 SUPERFAMILY SSF81935 18 189 3.27E-63 T 13-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 BEN78_04900 834acc8f44d1eb65ad7d1d4d0284a4f6 1075 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 74 187 9.4E-47 T 13-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 BEN78_04900 834acc8f44d1eb65ad7d1d4d0284a4f6 1075 Pfam PF00171 Aldehyde dehydrogenase family 597 1057 5.3E-115 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BEN78_04900 834acc8f44d1eb65ad7d1d4d0284a4f6 1075 Gene3D G3DSA:3.20.20.220 15 128 1.2E-8 T 13-10-2018 BEN78_04900 834acc8f44d1eb65ad7d1d4d0284a4f6 1075 SUPERFAMILY SSF51730 190 551 2.47E-114 T 13-10-2018 IPR029041 FAD-linked oxidoreductase-like BEN78_04900 834acc8f44d1eb65ad7d1d4d0284a4f6 1075 PIRSF PIRSF000197 5 1072 0.0 T 13-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 BEN78_04900 834acc8f44d1eb65ad7d1d4d0284a4f6 1075 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 857 868 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 BEN78_04900 834acc8f44d1eb65ad7d1d4d0284a4f6 1075 Gene3D G3DSA:3.20.20.220 142 546 5.4E-140 T 13-10-2018 BEN78_04900 834acc8f44d1eb65ad7d1d4d0284a4f6 1075 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 555 1053 1.6E-209 T 13-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 BEN78_04900 834acc8f44d1eb65ad7d1d4d0284a4f6 1075 Pfam PF01619 Proline dehydrogenase 201 511 5.9E-95 T 13-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 BEN78_13350 14681017680dac49f0bf4d37c18f6fc2 292 Gene3D G3DSA:1.10.3720.10 49 291 2.6E-76 T 13-10-2018 IPR035906 MetI-like superfamily BEN78_13350 14681017680dac49f0bf4d37c18f6fc2 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 278 1.2E-18 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN78_13350 14681017680dac49f0bf4d37c18f6fc2 292 SUPERFAMILY SSF161098 53 279 5.23E-64 T 13-10-2018 IPR035906 MetI-like superfamily BEN78_10285 82ec6277497223fe2bd636b031f31133 392 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 8 391 2.2E-126 T 13-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 BEN78_10285 82ec6277497223fe2bd636b031f31133 392 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 13-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 BEN78_10285 82ec6277497223fe2bd636b031f31133 392 Gene3D G3DSA:3.50.50.60 8 339 2.3E-104 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_10285 82ec6277497223fe2bd636b031f31133 392 Gene3D G3DSA:3.30.9.50 82 270 2.3E-104 T 13-10-2018 BEN78_10285 82ec6277497223fe2bd636b031f31133 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 3.6E-19 T 13-10-2018 BEN78_10285 82ec6277497223fe2bd636b031f31133 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 3.6E-19 T 13-10-2018 BEN78_10285 82ec6277497223fe2bd636b031f31133 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 3.6E-19 T 13-10-2018 BEN78_10285 82ec6277497223fe2bd636b031f31133 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 3.6E-19 T 13-10-2018 BEN78_10285 82ec6277497223fe2bd636b031f31133 392 Pfam PF01494 FAD binding domain 8 319 2.6E-27 T 13-10-2018 IPR002938 FAD-binding domain GO:0071949 BEN78_10285 82ec6277497223fe2bd636b031f31133 392 SUPERFAMILY SSF51905 8 385 5.18E-56 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_06255 ed0866cc062e352b91b0df2c32655673 1692 Gene3D G3DSA:2.150.10.10 1450 1593 1.2E-27 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_06255 ed0866cc062e352b91b0df2c32655673 1692 Gene3D G3DSA:3.30.1300.30 1594 1691 9.1E-16 T 13-10-2018 BEN78_06255 ed0866cc062e352b91b0df2c32655673 1692 SUPERFAMILY SSF101967 647 834 3.2E-34 T 13-10-2018 BEN78_06255 ed0866cc062e352b91b0df2c32655673 1692 SUPERFAMILY SSF101967 266 448 9.68E-34 T 13-10-2018 BEN78_06255 ed0866cc062e352b91b0df2c32655673 1692 SUPERFAMILY SSF101967 85 275 1.96E-9 T 13-10-2018 BEN78_06255 ed0866cc062e352b91b0df2c32655673 1692 Gene3D G3DSA:1.20.5.170 1320 1418 7.9E-15 T 13-10-2018 BEN78_06255 ed0866cc062e352b91b0df2c32655673 1692 SUPERFAMILY SSF101967 1411 1564 3.66E-28 T 13-10-2018 BEN78_06255 ed0866cc062e352b91b0df2c32655673 1692 SUPERFAMILY SSF101967 847 968 2.75E-9 T 13-10-2018 BEN78_06255 ed0866cc062e352b91b0df2c32655673 1692 Gene3D G3DSA:1.20.5.170 1254 1301 1.6E-12 T 13-10-2018 BEN78_06255 ed0866cc062e352b91b0df2c32655673 1692 SUPERFAMILY SSF101967 464 522 5.62E-6 T 13-10-2018 BEN78_06255 ed0866cc062e352b91b0df2c32655673 1692 SUPERFAMILY SSF101967 1243 1274 1.96E-5 T 13-10-2018 BEN78_06255 ed0866cc062e352b91b0df2c32655673 1692 Gene3D G3DSA:2.150.10.10 84 199 1.5E-10 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_06255 ed0866cc062e352b91b0df2c32655673 1692 Gene3D G3DSA:2.150.10.10 986 1049 1.5E-12 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_06255 ed0866cc062e352b91b0df2c32655673 1692 Gene3D G3DSA:2.150.10.10 467 593 3.4E-14 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_06255 ed0866cc062e352b91b0df2c32655673 1692 Gene3D G3DSA:2.150.10.10 217 279 4.3E-12 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_06255 ed0866cc062e352b91b0df2c32655673 1692 Gene3D G3DSA:2.150.10.10 601 676 1.7E-11 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_06255 ed0866cc062e352b91b0df2c32655673 1692 Gene3D G3DSA:2.150.10.10 852 981 1.3E-12 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_06255 ed0866cc062e352b91b0df2c32655673 1692 SUPERFAMILY SSF54523 1554 1690 1.32E-10 T 13-10-2018 BEN78_06255 ed0866cc062e352b91b0df2c32655673 1692 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1323 1356 0.015 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_06255 ed0866cc062e352b91b0df2c32655673 1692 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1249 1288 5.1E-12 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_06255 ed0866cc062e352b91b0df2c32655673 1692 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1195 1230 4.3E-10 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_06255 ed0866cc062e352b91b0df2c32655673 1692 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1543 1583 2.9E-4 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_06255 ed0866cc062e352b91b0df2c32655673 1692 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 812 847 5.0E-11 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_06255 ed0866cc062e352b91b0df2c32655673 1692 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 426 461 4.8E-10 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_06255 ed0866cc062e352b91b0df2c32655673 1692 SUPERFAMILY SSF101967 527 583 7.98E-5 T 13-10-2018 BEN78_06255 ed0866cc062e352b91b0df2c32655673 1692 Pfam PF05658 Head domain of trimeric autotransporter adhesin 240 260 4.9E-4 T 13-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_06255 ed0866cc062e352b91b0df2c32655673 1692 Pfam PF05658 Head domain of trimeric autotransporter adhesin 633 659 1.6E-5 T 13-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_06255 ed0866cc062e352b91b0df2c32655673 1692 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1018 1044 4.4E-5 T 13-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_06255 ed0866cc062e352b91b0df2c32655673 1692 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1032 1058 8.8E-5 T 13-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_06255 ed0866cc062e352b91b0df2c32655673 1692 Pfam PF05658 Head domain of trimeric autotransporter adhesin 263 289 1.3E-4 T 13-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_06255 ed0866cc062e352b91b0df2c32655673 1692 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 2.2E-7 T 13-10-2018 IPR024973 ESPR domain BEN78_06255 ed0866cc062e352b91b0df2c32655673 1692 SUPERFAMILY SSF101967 1031 1217 4.58E-35 T 13-10-2018 BEN78_06255 ed0866cc062e352b91b0df2c32655673 1692 Pfam PF03895 YadA-like membrane anchor domain 1642 1690 5.7E-8 T 13-10-2018 IPR005594 YadA-like, C-terminal BEN78_06255 ed0866cc062e352b91b0df2c32655673 1692 Gene3D G3DSA:2.150.10.10 678 842 2.2E-34 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_06255 ed0866cc062e352b91b0df2c32655673 1692 Gene3D G3DSA:2.150.10.10 292 455 4.3E-35 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_06255 ed0866cc062e352b91b0df2c32655673 1692 Gene3D G3DSA:2.150.10.10 1060 1225 2.1E-35 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_13870 1f131b81cae5843d819ef83438606c0b 248 Gene3D G3DSA:1.20.120.160 150 248 4.0E-11 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 BEN78_13870 1f131b81cae5843d819ef83438606c0b 248 SMART SM00448 6 117 2.7E-12 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_13870 1f131b81cae5843d819ef83438606c0b 248 Pfam PF01627 Hpt domain 171 243 5.1E-5 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BEN78_13870 1f131b81cae5843d819ef83438606c0b 248 Gene3D G3DSA:3.40.50.2300 5 125 7.4E-20 T 13-10-2018 BEN78_13870 1f131b81cae5843d819ef83438606c0b 248 SUPERFAMILY SSF52172 4 122 1.71E-22 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_13870 1f131b81cae5843d819ef83438606c0b 248 SUPERFAMILY SSF47226 152 230 2.22E-9 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 BEN78_13870 1f131b81cae5843d819ef83438606c0b 248 Pfam PF00072 Response regulator receiver domain 9 117 5.9E-13 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_09820 fe0fee8cd745d8ca84e024d786702bb6 384 Pfam PF06969 HemN C-terminal domain 312 370 6.6E-7 T 13-10-2018 IPR010723 HemN, C-terminal BEN78_09820 fe0fee8cd745d8ca84e024d786702bb6 384 Gene3D G3DSA:3.80.30.20 3 295 9.7E-104 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe BEN78_09820 fe0fee8cd745d8ca84e024d786702bb6 384 Pfam PF04055 Radical SAM superfamily 11 179 6.0E-22 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BEN78_09820 fe0fee8cd745d8ca84e024d786702bb6 384 SMART SM00729 6 223 2.1E-51 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BEN78_09820 fe0fee8cd745d8ca84e024d786702bb6 384 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 352 2.8E-109 T 13-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 BEN78_09820 fe0fee8cd745d8ca84e024d786702bb6 384 SUPERFAMILY SSF102114 4 382 2.22E-109 T 13-10-2018 BEN78_11770 0dc78f43ff4b2ea1432d5243310f3ef3 499 Gene3D G3DSA:3.40.640.10 119 390 1.3E-58 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN78_11770 0dc78f43ff4b2ea1432d5243310f3ef3 499 SUPERFAMILY SSF53383 74 488 1.84E-56 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_11770 0dc78f43ff4b2ea1432d5243310f3ef3 499 Gene3D G3DSA:3.90.1150.10 91 477 1.3E-58 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN78_11770 0dc78f43ff4b2ea1432d5243310f3ef3 499 Pfam PF00202 Aminotransferase class-III 86 487 3.5E-38 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BEN78_15775 565c28e3b588397c1143f3b869880961 284 SUPERFAMILY SSF56219 32 283 7.72E-36 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BEN78_15775 565c28e3b588397c1143f3b869880961 284 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 43 273 6.1E-15 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase BEN78_15775 565c28e3b588397c1143f3b869880961 284 Gene3D G3DSA:3.60.10.10 37 284 1.4E-45 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BEN78_09510 9b1678a3036954a7db0c7727651e861b 285 Gene3D G3DSA:3.40.1010.10 2 120 6.5E-40 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 BEN78_09510 9b1678a3036954a7db0c7727651e861b 285 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 14 213 1.2E-28 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 BEN78_09510 9b1678a3036954a7db0c7727651e861b 285 SUPERFAMILY SSF53790 12 232 1.31E-77 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 BEN78_09510 9b1678a3036954a7db0c7727651e861b 285 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 13-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 BEN78_09510 9b1678a3036954a7db0c7727651e861b 285 PIRSF PIRSF005917 2 284 5.2E-95 T 13-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 BEN78_09510 9b1678a3036954a7db0c7727651e861b 285 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 13 281 4.4E-78 T 13-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 BEN78_09510 9b1678a3036954a7db0c7727651e861b 285 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 36.763 T 13-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 BEN78_09510 9b1678a3036954a7db0c7727651e861b 285 Gene3D G3DSA:3.30.950.10 121 241 3.6E-40 T 13-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 BEN78_04135 3d80f25d8022fdbde637b4115e116fa1 465 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 1 321 9.5E-69 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BEN78_04135 3d80f25d8022fdbde637b4115e116fa1 465 SUPERFAMILY SSF55424 338 459 1.49E-40 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BEN78_04135 3d80f25d8022fdbde637b4115e116fa1 465 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 34 44 - T 13-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 BEN78_04135 3d80f25d8022fdbde637b4115e116fa1 465 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 1 453 2.0E-154 T 13-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 BEN78_04135 3d80f25d8022fdbde637b4115e116fa1 465 PIRSF PIRSF000350 1 460 1.0E-92 T 13-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 BEN78_04135 3d80f25d8022fdbde637b4115e116fa1 465 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 340 448 5.3E-37 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 BEN78_04135 3d80f25d8022fdbde637b4115e116fa1 465 SUPERFAMILY SSF51905 1 374 8.64E-59 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_04135 3d80f25d8022fdbde637b4115e116fa1 465 Gene3D G3DSA:3.50.50.60 1 326 6.3E-117 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_04135 3d80f25d8022fdbde637b4115e116fa1 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 1.5E-56 T 13-10-2018 BEN78_04135 3d80f25d8022fdbde637b4115e116fa1 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 134 143 1.5E-56 T 13-10-2018 BEN78_04135 3d80f25d8022fdbde637b4115e116fa1 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 33 48 1.5E-56 T 13-10-2018 BEN78_04135 3d80f25d8022fdbde637b4115e116fa1 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 170 195 1.5E-56 T 13-10-2018 BEN78_04135 3d80f25d8022fdbde637b4115e116fa1 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 258 272 1.5E-56 T 13-10-2018 BEN78_04135 3d80f25d8022fdbde637b4115e116fa1 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 301 308 1.5E-56 T 13-10-2018 BEN78_04135 3d80f25d8022fdbde637b4115e116fa1 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 401 416 1.5E-56 T 13-10-2018 BEN78_04135 3d80f25d8022fdbde637b4115e116fa1 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 423 443 1.5E-56 T 13-10-2018 BEN78_04135 3d80f25d8022fdbde637b4115e116fa1 465 Gene3D G3DSA:3.50.50.60 146 267 6.3E-117 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_04135 3d80f25d8022fdbde637b4115e116fa1 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 170 188 8.3E-40 T 13-10-2018 BEN78_04135 3d80f25d8022fdbde637b4115e116fa1 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 131 149 8.3E-40 T 13-10-2018 BEN78_04135 3d80f25d8022fdbde637b4115e116fa1 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 273 8.3E-40 T 13-10-2018 BEN78_04135 3d80f25d8022fdbde637b4115e116fa1 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 1 20 8.3E-40 T 13-10-2018 BEN78_04135 3d80f25d8022fdbde637b4115e116fa1 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 286 308 8.3E-40 T 13-10-2018 BEN78_04135 3d80f25d8022fdbde637b4115e116fa1 465 Gene3D G3DSA:3.30.390.30 339 460 4.9E-46 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BEN78_06265 4d5fc460b18d29bda3b5d504cf2cbfbe 234 Pfam PF00072 Response regulator receiver domain 7 116 8.0E-17 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_06265 4d5fc460b18d29bda3b5d504cf2cbfbe 234 Gene3D G3DSA:1.10.10.10 132 231 1.6E-14 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_06265 4d5fc460b18d29bda3b5d504cf2cbfbe 234 SMART SM00862 154 230 1.0E-7 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN78_06265 4d5fc460b18d29bda3b5d504cf2cbfbe 234 SMART SM00448 5 117 4.8E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_06265 4d5fc460b18d29bda3b5d504cf2cbfbe 234 SUPERFAMILY SSF46894 138 231 2.35E-12 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BEN78_06265 4d5fc460b18d29bda3b5d504cf2cbfbe 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 230 2.9E-11 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN78_06265 4d5fc460b18d29bda3b5d504cf2cbfbe 234 SUPERFAMILY SSF52172 4 128 9.53E-27 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_06265 4d5fc460b18d29bda3b5d504cf2cbfbe 234 Gene3D G3DSA:3.40.50.2300 3 131 1.2E-23 T 13-10-2018 BEN78_00450 3f303c8ff3404a9ad399a68122d2e345 226 Pfam PF00072 Response regulator receiver domain 4 113 2.1E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_00450 3f303c8ff3404a9ad399a68122d2e345 226 Gene3D G3DSA:3.40.50.2300 1 118 1.5E-32 T 13-10-2018 BEN78_00450 3f303c8ff3404a9ad399a68122d2e345 226 Gene3D G3DSA:1.10.10.10 119 224 7.1E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_00450 3f303c8ff3404a9ad399a68122d2e345 226 SMART SM00448 2 112 1.0E-37 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_00450 3f303c8ff3404a9ad399a68122d2e345 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 223 2.0E-22 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN78_00450 3f303c8ff3404a9ad399a68122d2e345 226 SMART SM00862 147 223 4.8E-25 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN78_00450 3f303c8ff3404a9ad399a68122d2e345 226 SUPERFAMILY SSF52172 2 175 9.82E-37 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_12375 57d5be574cf9d1d71176616509bd0080 938 SUPERFAMILY SSF52374 1 648 1.1E-128 T 13-10-2018 BEN78_12375 57d5be574cf9d1d71176616509bd0080 938 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 1 846 1.1E-263 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BEN78_12375 57d5be574cf9d1d71176616509bd0080 938 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 1 924 20.189 T 13-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 BEN78_12375 57d5be574cf9d1d71176616509bd0080 938 Gene3D G3DSA:3.40.50.620 9 630 1.3E-217 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_12375 57d5be574cf9d1d71176616509bd0080 938 Pfam PF06827 Zinc finger found in FPG and IleRS 895 921 9.0E-5 T 13-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 BEN78_12375 57d5be574cf9d1d71176616509bd0080 938 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN78_12375 57d5be574cf9d1d71176616509bd0080 938 Pfam PF08264 Anticodon-binding domain of tRNA 686 846 1.3E-24 T 13-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 BEN78_12375 57d5be574cf9d1d71176616509bd0080 938 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 12 642 4.7E-193 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN78_12375 57d5be574cf9d1d71176616509bd0080 938 Gene3D G3DSA:1.10.730.20 641 925 1.8E-79 T 13-10-2018 BEN78_12375 57d5be574cf9d1d71176616509bd0080 938 Gene3D G3DSA:3.90.740.10 179 411 1.3E-217 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BEN78_12375 57d5be574cf9d1d71176616509bd0080 938 SUPERFAMILY SSF47323 653 923 2.06E-63 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN78_12375 57d5be574cf9d1d71176616509bd0080 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 562 571 1.7E-30 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BEN78_12375 57d5be574cf9d1d71176616509bd0080 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 404 419 1.7E-30 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BEN78_12375 57d5be574cf9d1d71176616509bd0080 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 529 542 1.7E-30 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BEN78_12375 57d5be574cf9d1d71176616509bd0080 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 35 46 1.7E-30 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BEN78_12375 57d5be574cf9d1d71176616509bd0080 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 223 246 1.7E-30 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BEN78_12375 57d5be574cf9d1d71176616509bd0080 938 SUPERFAMILY SSF50677 189 406 3.66E-40 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BEN78_09295 45158e40f81844efcfade6beda9fe30e 325 SUPERFAMILY SSF56349 126 323 8.24E-53 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BEN78_09295 45158e40f81844efcfade6beda9fe30e 325 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 28 104 4.7E-13 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 BEN78_09295 45158e40f81844efcfade6beda9fe30e 325 SUPERFAMILY SSF47823 24 120 4.51E-28 T 13-10-2018 BEN78_09295 45158e40f81844efcfade6beda9fe30e 325 Gene3D G3DSA:1.10.150.130 23 118 7.6E-14 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal BEN78_09295 45158e40f81844efcfade6beda9fe30e 325 Gene3D G3DSA:1.10.443.10 131 319 2.2E-63 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BEN78_09295 45158e40f81844efcfade6beda9fe30e 325 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 26 325 53.666 T 13-10-2018 IPR023009 Tyrosine recombinase XerC/XerD BEN78_09295 45158e40f81844efcfade6beda9fe30e 325 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 24 325 56.56 T 13-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 BEN78_09295 45158e40f81844efcfade6beda9fe30e 325 Pfam PF00589 Phage integrase family 133 310 4.6E-44 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BEN78_09295 45158e40f81844efcfade6beda9fe30e 325 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 30 324 1.2E-103 T 13-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 BEN78_06450 acc5112c90fb68efc6d333fa4eb9b8a4 568 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 379 558 9.1E-67 T 13-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_06450 acc5112c90fb68efc6d333fa4eb9b8a4 568 PRINTS PR00701 60kDa inner membrane protein signature 270 285 4.4E-50 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BEN78_06450 acc5112c90fb68efc6d333fa4eb9b8a4 568 PRINTS PR00701 60kDa inner membrane protein signature 180 200 4.4E-50 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BEN78_06450 acc5112c90fb68efc6d333fa4eb9b8a4 568 PRINTS PR00701 60kDa inner membrane protein signature 236 254 4.4E-50 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BEN78_06450 acc5112c90fb68efc6d333fa4eb9b8a4 568 PRINTS PR00701 60kDa inner membrane protein signature 2 23 4.4E-50 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BEN78_06450 acc5112c90fb68efc6d333fa4eb9b8a4 568 PRINTS PR00701 60kDa inner membrane protein signature 441 464 4.4E-50 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BEN78_06450 acc5112c90fb68efc6d333fa4eb9b8a4 568 PRINTS PR00701 60kDa inner membrane protein signature 525 548 4.4E-50 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BEN78_06450 acc5112c90fb68efc6d333fa4eb9b8a4 568 PRINTS PR00701 60kDa inner membrane protein signature 88 109 4.4E-50 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BEN78_06450 acc5112c90fb68efc6d333fa4eb9b8a4 568 PRINTS PR00701 60kDa inner membrane protein signature 488 510 4.4E-50 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BEN78_06450 acc5112c90fb68efc6d333fa4eb9b8a4 568 PRINTS PR01900 YidC translocation/secretion protein signature 494 509 3.1E-19 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BEN78_06450 acc5112c90fb68efc6d333fa4eb9b8a4 568 PRINTS PR01900 YidC translocation/secretion protein signature 365 381 3.1E-19 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BEN78_06450 acc5112c90fb68efc6d333fa4eb9b8a4 568 PRINTS PR01900 YidC translocation/secretion protein signature 514 538 3.1E-19 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BEN78_06450 acc5112c90fb68efc6d333fa4eb9b8a4 568 Gene3D G3DSA:2.70.98.90 80 357 8.7E-68 T 13-10-2018 IPR038221 YidC, periplasmic domain superfamily BEN78_06450 acc5112c90fb68efc6d333fa4eb9b8a4 568 Pfam PF14849 YidC periplasmic domain 84 368 3.7E-63 T 13-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain BEN78_06450 acc5112c90fb68efc6d333fa4eb9b8a4 568 Pfam PF02096 60Kd inner membrane protein 380 558 3.6E-57 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BEN78_06450 acc5112c90fb68efc6d333fa4eb9b8a4 568 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 378 6.9E-77 T 13-10-2018 IPR028053 Membrane insertase YidC, N-terminal BEN78_06450 acc5112c90fb68efc6d333fa4eb9b8a4 568 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 561 22.206 T 13-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 BEN78_15570 46c038e5dd07e2f859c2c0a89867ba17 67 SUPERFAMILY SSF109910 1 62 7.06E-16 T 13-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily BEN78_15570 46c038e5dd07e2f859c2c0a89867ba17 67 Pfam PF03937 Flavinator of succinate dehydrogenase 1 60 4.5E-15 T 13-10-2018 IPR005631 Flavinator of succinate dehydrogenase BEN78_15570 46c038e5dd07e2f859c2c0a89867ba17 67 Gene3D G3DSA:1.10.150.250 1 64 1.4E-18 T 13-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily BEN78_12355 bfd5cb12caab34b3df00dd1315178874 346 Gene3D G3DSA:3.40.50.300 159 337 4.2E-46 T 13-10-2018 BEN78_12355 bfd5cb12caab34b3df00dd1315178874 346 PIRSF PIRSF002401 1 345 5.9E-135 T 13-10-2018 IPR035101 GTP-binding protein, Obg-type BEN78_12355 bfd5cb12caab34b3df00dd1315178874 346 Pfam PF01018 GTP1/OBG 4 158 1.2E-60 T 13-10-2018 IPR006169 GTP1/OBG domain BEN78_12355 bfd5cb12caab34b3df00dd1315178874 346 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 13-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 BEN78_12355 bfd5cb12caab34b3df00dd1315178874 346 SUPERFAMILY SSF52540 151 336 4.18E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_12355 bfd5cb12caab34b3df00dd1315178874 346 Gene3D G3DSA:2.70.210.12 1 158 2.2E-61 T 13-10-2018 IPR036726 GTP1/OBG domain superfamily BEN78_12355 bfd5cb12caab34b3df00dd1315178874 346 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 331 1.1E-139 T 13-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 BEN78_12355 bfd5cb12caab34b3df00dd1315178874 346 Pfam PF01926 50S ribosome-binding GTPase 161 284 1.1E-21 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 BEN78_12355 bfd5cb12caab34b3df00dd1315178874 346 SUPERFAMILY SSF82051 3 158 5.23E-58 T 13-10-2018 IPR036726 GTP1/OBG domain superfamily BEN78_12355 bfd5cb12caab34b3df00dd1315178874 346 Hamap MF_01454 GTPase Obg [obg]. 2 333 47.474 T 13-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 BEN78_12355 bfd5cb12caab34b3df00dd1315178874 346 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 4.5E-33 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 BEN78_12355 bfd5cb12caab34b3df00dd1315178874 346 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 4.5E-33 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 BEN78_12355 bfd5cb12caab34b3df00dd1315178874 346 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 4.5E-33 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 BEN78_12355 bfd5cb12caab34b3df00dd1315178874 346 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 4.5E-33 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 BEN78_03510 5de967f92c0b1f4f0f9cb3e0da81d20c 162 Pfam PF01899 Na+/H+ ion antiporter subunit 13 160 1.7E-38 T 13-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 BEN78_03510 5de967f92c0b1f4f0f9cb3e0da81d20c 162 PIRSF PIRSF019239 2 162 2.7E-36 T 13-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 BEN78_06290 0ce6e81e67d2b1807207d01fdf17e8fd 161 Pfam PF13412 Winged helix-turn-helix DNA-binding 10 56 2.6E-18 T 13-10-2018 BEN78_06290 0ce6e81e67d2b1807207d01fdf17e8fd 161 SMART SM00344 10 119 1.4E-38 T 13-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 BEN78_06290 0ce6e81e67d2b1807207d01fdf17e8fd 161 Gene3D G3DSA:1.10.10.10 2 63 1.2E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_06290 0ce6e81e67d2b1807207d01fdf17e8fd 161 Pfam PF01037 Lrp/AsnC ligand binding domain 76 150 8.6E-23 T 13-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BEN78_06290 0ce6e81e67d2b1807207d01fdf17e8fd 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 10 26 1.2E-13 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BEN78_06290 0ce6e81e67d2b1807207d01fdf17e8fd 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 37 56 1.2E-13 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BEN78_06290 0ce6e81e67d2b1807207d01fdf17e8fd 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 26 37 1.2E-13 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BEN78_06290 0ce6e81e67d2b1807207d01fdf17e8fd 161 SUPERFAMILY SSF54909 70 159 5.77E-22 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel BEN78_06290 0ce6e81e67d2b1807207d01fdf17e8fd 161 Gene3D G3DSA:3.30.70.920 64 147 5.3E-28 T 13-10-2018 BEN78_06290 0ce6e81e67d2b1807207d01fdf17e8fd 161 SUPERFAMILY SSF46785 4 117 2.94E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_01990 8977cc0b32cea5af45fb9ae6c7f9497b 365 Pfam PF12698 ABC-2 family transporter protein 23 357 5.4E-47 T 13-10-2018 BEN78_02590 d9f98e56ecc74e2bbafe0f5083906e0e 235 SUPERFAMILY SSF161098 9 226 2.22E-49 T 13-10-2018 IPR035906 MetI-like superfamily BEN78_02590 d9f98e56ecc74e2bbafe0f5083906e0e 235 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 230 1.3E-22 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN78_02590 d9f98e56ecc74e2bbafe0f5083906e0e 235 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 19 228 3.6E-70 T 13-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 BEN78_02590 d9f98e56ecc74e2bbafe0f5083906e0e 235 Gene3D G3DSA:1.10.3720.10 2 233 9.6E-60 T 13-10-2018 IPR035906 MetI-like superfamily BEN78_00865 51fd07f7a1c3612b0a7a87ddaa4d07ad 87 Gene3D G3DSA:3.30.1070.10 19 78 1.6E-24 T 13-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 BEN78_00865 51fd07f7a1c3612b0a7a87ddaa4d07ad 87 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 81 2.2E-27 T 13-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 BEN78_00865 51fd07f7a1c3612b0a7a87ddaa4d07ad 87 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 83 17.318 T 13-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 BEN78_00865 51fd07f7a1c3612b0a7a87ddaa4d07ad 87 SUPERFAMILY SSF55229 32 84 1.96E-13 T 13-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 BEN78_00865 51fd07f7a1c3612b0a7a87ddaa4d07ad 87 Pfam PF03776 Septum formation topological specificity factor MinE 13 80 1.8E-20 T 13-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 BEN78_11295 203026118a50d01bae57a4e10fe98c60 204 SUPERFAMILY SSF47616 69 199 1.16E-22 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BEN78_11295 203026118a50d01bae57a4e10fe98c60 204 SUPERFAMILY SSF52833 1 79 5.95E-19 T 13-10-2018 IPR036249 Thioredoxin-like superfamily BEN78_11295 203026118a50d01bae57a4e10fe98c60 204 Gene3D G3DSA:3.40.30.10 4 199 2.9E-68 T 13-10-2018 BEN78_11295 203026118a50d01bae57a4e10fe98c60 204 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 71 3.4E-9 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 BEN78_11295 203026118a50d01bae57a4e10fe98c60 204 Pfam PF00043 Glutathione S-transferase, C-terminal domain 122 192 2.2E-7 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal BEN78_11295 203026118a50d01bae57a4e10fe98c60 204 Gene3D G3DSA:1.20.1050.10 80 191 2.9E-68 T 13-10-2018 BEN78_10310 71a3a58779026f7315a98b6a22cac1fd 186 SUPERFAMILY SSF53927 6 180 4.07E-33 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 BEN78_10310 71a3a58779026f7315a98b6a22cac1fd 186 Gene3D G3DSA:3.40.140.10 10 180 1.8E-36 T 13-10-2018 BEN78_10310 71a3a58779026f7315a98b6a22cac1fd 186 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 31 130 1.7E-12 T 13-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain BEN78_10000 3678b6f836df90d812ecff3299a5f0d9 1375 Gene3D G3DSA:1.20.120.1080 494 588 2.4E-20 T 13-10-2018 BEN78_10000 3678b6f836df90d812ecff3299a5f0d9 1375 Gene3D G3DSA:3.40.50.300 255 444 1.5E-53 T 13-10-2018 BEN78_10000 3678b6f836df90d812ecff3299a5f0d9 1375 SMART SM00847 509 599 5.3E-33 T 13-10-2018 IPR007502 Helicase-associated domain GO:0004386 BEN78_10000 3678b6f836df90d812ecff3299a5f0d9 1375 SMART SM00382 93 393 3.7E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_10000 3678b6f836df90d812ecff3299a5f0d9 1375 SMART SM00487 76 260 3.2E-24 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN78_10000 3678b6f836df90d812ecff3299a5f0d9 1375 Pfam PF11898 Domain of unknown function (DUF3418) 780 1368 9.1E-164 T 13-10-2018 IPR024590 RNA helicase HrpA, C-terminal BEN78_10000 3678b6f836df90d812ecff3299a5f0d9 1375 Pfam PF00270 DEAD/DEAH box helicase 85 234 9.2E-6 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BEN78_10000 3678b6f836df90d812ecff3299a5f0d9 1375 SUPERFAMILY SSF52540 77 621 8.51E-94 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_10000 3678b6f836df90d812ecff3299a5f0d9 1375 SMART SM00490 327 427 7.4E-13 T 13-10-2018 IPR001650 Helicase, C-terminal BEN78_10000 3678b6f836df90d812ecff3299a5f0d9 1375 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 45 1368 0.0 T 13-10-2018 IPR010222 RNA helicase HrpA GO:0004004 BEN78_10000 3678b6f836df90d812ecff3299a5f0d9 1375 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 683 761 6.5E-14 T 13-10-2018 IPR011709 Domain of unknown function DUF1605 BEN78_10000 3678b6f836df90d812ecff3299a5f0d9 1375 Pfam PF04408 Helicase associated domain (HA2) 512 603 2.4E-16 T 13-10-2018 IPR007502 Helicase-associated domain GO:0004386 BEN78_10000 3678b6f836df90d812ecff3299a5f0d9 1375 Pfam PF00271 Helicase conserved C-terminal domain 303 426 9.5E-11 T 13-10-2018 IPR001650 Helicase, C-terminal BEN78_10000 3678b6f836df90d812ecff3299a5f0d9 1375 Gene3D G3DSA:3.40.50.300 39 253 5.1E-77 T 13-10-2018 BEN78_03615 dd95a46654650dd139be82b188b97f56 439 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 6 335 5.5E-85 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 BEN78_03615 dd95a46654650dd139be82b188b97f56 439 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 205 215 4.1E-19 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 BEN78_03615 dd95a46654650dd139be82b188b97f56 439 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 153 174 4.1E-19 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 BEN78_03615 dd95a46654650dd139be82b188b97f56 439 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 70 89 4.1E-19 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 BEN78_03615 dd95a46654650dd139be82b188b97f56 439 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 18 34 4.1E-19 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 BEN78_03615 dd95a46654650dd139be82b188b97f56 439 SUPERFAMILY SSF160113 357 401 3.45E-6 T 13-10-2018 IPR036913 YegP-like superfamily BEN78_03615 dd95a46654650dd139be82b188b97f56 439 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 14 23 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN78_03615 dd95a46654650dd139be82b188b97f56 439 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 5 336 36.776 T 13-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 BEN78_03615 dd95a46654650dd139be82b188b97f56 439 Gene3D G3DSA:3.40.50.620 7 335 2.0E-109 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_03615 dd95a46654650dd139be82b188b97f56 439 Gene3D G3DSA:1.10.240.10 200 302 2.0E-109 T 13-10-2018 BEN78_03615 dd95a46654650dd139be82b188b97f56 439 Pfam PF00579 tRNA synthetases class I (W and Y) 2 286 1.6E-55 T 13-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN78_03615 dd95a46654650dd139be82b188b97f56 439 SUPERFAMILY SSF52374 5 335 5.43E-78 T 13-10-2018 BEN78_01315 e27aaac91f0388ef0aea727a31cabc07 333 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 48 182 1.2E-62 T 13-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 BEN78_01315 e27aaac91f0388ef0aea727a31cabc07 333 Gene3D G3DSA:1.10.8.300 217 328 1.9E-29 T 13-10-2018 BEN78_01315 e27aaac91f0388ef0aea727a31cabc07 333 Gene3D G3DSA:3.40.50.300 9 216 1.4E-49 T 13-10-2018 BEN78_01315 e27aaac91f0388ef0aea727a31cabc07 333 SMART SM00382 45 190 9.0E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_01315 e27aaac91f0388ef0aea727a31cabc07 333 PIRSF PIRSF002849 1 333 5.5E-121 T 13-10-2018 BEN78_01315 e27aaac91f0388ef0aea727a31cabc07 333 SUPERFAMILY SSF52540 11 303 2.21E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_10415 dba403df621c71633d675ee350ad24bd 465 SUPERFAMILY SSF52467 286 459 4.5E-71 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily BEN78_10415 dba403df621c71633d675ee350ad24bd 465 Pfam PF02233 NAD(P) transhydrogenase beta subunit 13 456 5.5E-171 T 13-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 BEN78_10415 dba403df621c71633d675ee350ad24bd 465 Gene3D G3DSA:3.40.50.1220 277 461 1.2E-80 T 13-10-2018 BEN78_10415 dba403df621c71633d675ee350ad24bd 465 PIRSF PIRSF000204 6 460 1.9E-158 T 13-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 BEN78_14205 b09bd6ff36fb22dd7cef7df3548db03c 176 SUPERFAMILY SSF58014 26 117 1.29E-18 T 13-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 BEN78_14205 b09bd6ff36fb22dd7cef7df3548db03c 176 Gene3D G3DSA:2.30.22.10 117 174 6.4E-23 T 13-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 BEN78_14205 b09bd6ff36fb22dd7cef7df3548db03c 176 ProSitePatterns PS01071 grpE protein signature. 129 172 - T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BEN78_14205 b09bd6ff36fb22dd7cef7df3548db03c 176 Hamap MF_01151 Protein GrpE [grpE]. 3 174 19.056 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BEN78_14205 b09bd6ff36fb22dd7cef7df3548db03c 176 SUPERFAMILY SSF51064 123 174 2.62E-18 T 13-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 BEN78_14205 b09bd6ff36fb22dd7cef7df3548db03c 176 Gene3D G3DSA:3.90.20.20 2 114 4.0E-18 T 13-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 BEN78_14205 b09bd6ff36fb22dd7cef7df3548db03c 176 Pfam PF01025 GrpE 13 174 3.2E-45 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BEN78_14205 b09bd6ff36fb22dd7cef7df3548db03c 176 PRINTS PR00773 GrpE protein signature 153 172 2.7E-22 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BEN78_14205 b09bd6ff36fb22dd7cef7df3548db03c 176 PRINTS PR00773 GrpE protein signature 126 141 2.7E-22 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BEN78_14205 b09bd6ff36fb22dd7cef7df3548db03c 176 PRINTS PR00773 GrpE protein signature 46 62 2.7E-22 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BEN78_14205 b09bd6ff36fb22dd7cef7df3548db03c 176 PRINTS PR00773 GrpE protein signature 74 89 2.7E-22 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BEN78_15015 2d5e2e837194b30e71f5522bc95dac55 679 Gene3D G3DSA:2.40.50.100 606 671 3.1E-19 T 13-10-2018 BEN78_15015 2d5e2e837194b30e71f5522bc95dac55 679 SUPERFAMILY SSF56059 92 364 6.89E-71 T 13-10-2018 BEN78_15015 2d5e2e837194b30e71f5522bc95dac55 679 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 302 309 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BEN78_15015 2d5e2e837194b30e71f5522bc95dac55 679 Gene3D G3DSA:3.30.700.40 461 555 3.3E-5 T 13-10-2018 BEN78_15015 2d5e2e837194b30e71f5522bc95dac55 679 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 628 645 - T 13-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BEN78_15015 2d5e2e837194b30e71f5522bc95dac55 679 SUPERFAMILY SSF52440 8 122 1.8E-50 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BEN78_15015 2d5e2e837194b30e71f5522bc95dac55 679 SUPERFAMILY SSF51246 347 465 4.19E-35 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 BEN78_15015 2d5e2e837194b30e71f5522bc95dac55 679 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 124 338 4.9E-75 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BEN78_15015 2d5e2e837194b30e71f5522bc95dac55 679 SMART SM00878 352 459 1.0E-46 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BEN78_15015 2d5e2e837194b30e71f5522bc95dac55 679 Gene3D G3DSA:3.30.470.130 2 460 2.3E-198 T 13-10-2018 BEN78_15015 2d5e2e837194b30e71f5522bc95dac55 679 Pfam PF00364 Biotin-requiring enzyme 606 670 6.6E-12 T 13-10-2018 IPR000089 Biotin/lipoyl attachment BEN78_15015 2d5e2e837194b30e71f5522bc95dac55 679 Pfam PF00289 Biotin carboxylase, N-terminal domain 11 119 2.6E-46 T 13-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BEN78_15015 2d5e2e837194b30e71f5522bc95dac55 679 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 162 176 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BEN78_15015 2d5e2e837194b30e71f5522bc95dac55 679 SUPERFAMILY SSF51230 592 669 9.68E-19 T 13-10-2018 IPR011053 Single hybrid motif BEN78_15015 2d5e2e837194b30e71f5522bc95dac55 679 Pfam PF02785 Biotin carboxylase C-terminal domain 352 459 1.6E-33 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BEN78_15660 cb7477281cc0059f9d7610d8eba4c539 69 PRINTS PR00050 Cold shock protein signature 42 60 1.7E-18 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BEN78_15660 cb7477281cc0059f9d7610d8eba4c539 69 PRINTS PR00050 Cold shock protein signature 27 36 1.7E-18 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BEN78_15660 cb7477281cc0059f9d7610d8eba4c539 69 PRINTS PR00050 Cold shock protein signature 7 22 1.7E-18 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BEN78_15660 cb7477281cc0059f9d7610d8eba4c539 69 Gene3D G3DSA:2.40.50.140 5 67 1.3E-28 T 13-10-2018 BEN78_15660 cb7477281cc0059f9d7610d8eba4c539 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 1.2E-29 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BEN78_15660 cb7477281cc0059f9d7610d8eba4c539 69 PIRSF PIRSF002599 1 69 1.8E-23 T 13-10-2018 IPR012156 Cold shock, CspA GO:0003676 BEN78_15660 cb7477281cc0059f9d7610d8eba4c539 69 SUPERFAMILY SSF50249 2 68 1.09E-24 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN78_15660 cb7477281cc0059f9d7610d8eba4c539 69 SMART SM00357 6 69 1.2E-29 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 BEN78_15660 cb7477281cc0059f9d7610d8eba4c539 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 13-10-2018 IPR019844 Cold-shock conserved site BEN78_08645 24e8ccca599b7385fafb00a337032927 882 SUPERFAMILY SSF101967 333 387 2.75E-5 T 13-10-2018 BEN78_08645 24e8ccca599b7385fafb00a337032927 882 SUPERFAMILY SSF101967 233 309 1.12E-5 T 13-10-2018 BEN78_08645 24e8ccca599b7385fafb00a337032927 882 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 800 843 5.6E-8 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_08645 24e8ccca599b7385fafb00a337032927 882 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 117 159 1.3E-9 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_08645 24e8ccca599b7385fafb00a337032927 882 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 284 325 9.1E-9 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_08645 24e8ccca599b7385fafb00a337032927 882 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 362 404 1.7E-9 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_08645 24e8ccca599b7385fafb00a337032927 882 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 204 248 5.6E-8 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_08645 24e8ccca599b7385fafb00a337032927 882 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 38 79 3.4E-9 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_08645 24e8ccca599b7385fafb00a337032927 882 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 537 577 2.1E-9 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_08645 24e8ccca599b7385fafb00a337032927 882 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 457 501 8.4E-9 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_08645 24e8ccca599b7385fafb00a337032927 882 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 731 772 7.8E-11 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_08645 24e8ccca599b7385fafb00a337032927 882 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 629 673 2.6E-9 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_08645 24e8ccca599b7385fafb00a337032927 882 SUPERFAMILY SSF101967 147 227 9.02E-5 T 13-10-2018 BEN78_08645 24e8ccca599b7385fafb00a337032927 882 SUPERFAMILY SSF101967 568 654 1.03E-5 T 13-10-2018 BEN78_08645 24e8ccca599b7385fafb00a337032927 882 Gene3D G3DSA:2.150.10.10 311 387 3.3E-11 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_08645 24e8ccca599b7385fafb00a337032927 882 Gene3D G3DSA:2.150.10.10 229 310 6.3E-10 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_08645 24e8ccca599b7385fafb00a337032927 882 Gene3D G3DSA:2.150.10.10 563 654 1.0E-9 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_08645 24e8ccca599b7385fafb00a337032927 882 Gene3D G3DSA:2.150.10.10 1 63 5.8E-16 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_08645 24e8ccca599b7385fafb00a337032927 882 Gene3D G3DSA:2.150.10.10 757 827 9.9E-10 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_08645 24e8ccca599b7385fafb00a337032927 882 Gene3D G3DSA:2.150.10.10 64 142 2.3E-8 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_08645 24e8ccca599b7385fafb00a337032927 882 Gene3D G3DSA:2.150.10.10 483 562 1.7E-10 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_08645 24e8ccca599b7385fafb00a337032927 882 Gene3D G3DSA:2.150.10.10 655 756 1.2E-10 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_08645 24e8ccca599b7385fafb00a337032927 882 Gene3D G3DSA:2.150.10.10 388 482 1.1E-8 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_08645 24e8ccca599b7385fafb00a337032927 882 Gene3D G3DSA:2.150.10.10 143 228 2.3E-10 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_08645 24e8ccca599b7385fafb00a337032927 882 SUPERFAMILY SSF101967 660 756 7.98E-5 T 13-10-2018 BEN78_08645 24e8ccca599b7385fafb00a337032927 882 SUPERFAMILY SSF101967 72 142 3.27E-5 T 13-10-2018 BEN78_08645 24e8ccca599b7385fafb00a337032927 882 SUPERFAMILY SSF101967 485 562 4.71E-6 T 13-10-2018 BEN78_08645 24e8ccca599b7385fafb00a337032927 882 SUPERFAMILY SSF101967 15 63 2.09E-7 T 13-10-2018 BEN78_11635 27ec5693a55bff30d87aacd67421128e 248 Pfam PF00106 short chain dehydrogenase 15 206 1.4E-27 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_11635 27ec5693a55bff30d87aacd67421128e 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 3.9E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_11635 27ec5693a55bff30d87aacd67421128e 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 3.9E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_11635 27ec5693a55bff30d87aacd67421128e 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 3.9E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_11635 27ec5693a55bff30d87aacd67421128e 248 Gene3D G3DSA:3.40.50.720 6 247 1.3E-47 T 13-10-2018 BEN78_11635 27ec5693a55bff30d87aacd67421128e 248 SUPERFAMILY SSF51735 10 246 5.19E-45 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_04645 44b0489f30530054f996dd52bd5976b5 413 Pfam PF01966 HD domain 230 347 9.6E-6 T 13-10-2018 IPR006674 HD domain BEN78_04645 44b0489f30530054f996dd52bd5976b5 413 SUPERFAMILY SSF81301 1 119 2.18E-28 T 13-10-2018 BEN78_04645 44b0489f30530054f996dd52bd5976b5 413 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 3.2E-13 T 13-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 BEN78_04645 44b0489f30530054f996dd52bd5976b5 413 Gene3D G3DSA:3.30.460.10 1 121 6.1E-29 T 13-10-2018 BEN78_04645 44b0489f30530054f996dd52bd5976b5 413 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 408 51.278 T 13-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 BEN78_04645 44b0489f30530054f996dd52bd5976b5 413 Hamap MF_01262 CCA-adding enzyme [cca]. 1 402 39.561 T 13-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 BEN78_04645 44b0489f30530054f996dd52bd5976b5 413 PIRSF PIRSF000813 1 407 1.5E-183 T 13-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 BEN78_04645 44b0489f30530054f996dd52bd5976b5 413 SUPERFAMILY SSF81891 120 402 8.37E-54 T 13-10-2018 BEN78_04645 44b0489f30530054f996dd52bd5976b5 413 Gene3D G3DSA:1.10.3090.10 122 406 2.4E-42 T 13-10-2018 BEN78_04645 44b0489f30530054f996dd52bd5976b5 413 Pfam PF01743 Poly A polymerase head domain 3 122 1.4E-17 T 13-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 BEN78_15890 228cd149c83026d6b570f2e1e9bf000c 426 SUPERFAMILY SSF53383 11 421 8.75E-75 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_15890 228cd149c83026d6b570f2e1e9bf000c 426 Gene3D G3DSA:3.90.1150.10 14 417 1.9E-153 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN78_15890 228cd149c83026d6b570f2e1e9bf000c 426 TIGRFAM TIGR01814 kynureninase: kynureninase 15 422 1.5E-137 T 13-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 BEN78_15890 228cd149c83026d6b570f2e1e9bf000c 426 Pfam PF00266 Aminotransferase class-V 51 372 2.6E-9 T 13-10-2018 IPR000192 Aminotransferase class V domain BEN78_15890 228cd149c83026d6b570f2e1e9bf000c 426 PIRSF PIRSF038800 6 425 3.7E-154 T 13-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 BEN78_15890 228cd149c83026d6b570f2e1e9bf000c 426 Gene3D G3DSA:3.40.640.10 51 322 1.9E-153 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN78_15890 228cd149c83026d6b570f2e1e9bf000c 426 Hamap MF_01970 Kynureninase [kynU]. 2 423 44.839 T 13-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 BEN78_03575 00cf33f4575da823b408a1aed7681e12 1184 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 606 934 1.6E-6 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase BEN78_03575 00cf33f4575da823b408a1aed7681e12 1184 Pfam PF03160 Calx-beta domain 238 309 1.6E-9 T 13-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 BEN78_03575 00cf33f4575da823b408a1aed7681e12 1184 Gene3D G3DSA:3.60.10.10 603 941 1.4E-17 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BEN78_03575 00cf33f4575da823b408a1aed7681e12 1184 SUPERFAMILY SSF141072 217 332 1.01E-20 T 13-10-2018 IPR038081 CalX-like domain superfamily BEN78_03575 00cf33f4575da823b408a1aed7681e12 1184 Pfam PF00932 Lamin Tail Domain 21 131 9.3E-10 T 13-10-2018 IPR001322 Lamin tail domain BEN78_03575 00cf33f4575da823b408a1aed7681e12 1184 Gene3D G3DSA:2.60.120.380 1083 1181 3.2E-23 T 13-10-2018 BEN78_03575 00cf33f4575da823b408a1aed7681e12 1184 Gene3D G3DSA:2.60.40.2030 229 340 2.0E-16 T 13-10-2018 IPR038081 CalX-like domain superfamily BEN78_03575 00cf33f4575da823b408a1aed7681e12 1184 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 1101 1167 2.8E-8 T 13-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial BEN78_03575 00cf33f4575da823b408a1aed7681e12 1184 SUPERFAMILY SSF56219 601 942 3.6E-19 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BEN78_12725 7f83cefa01a91b4cb3b29bd8828273a4 250 ProSitePatterns PS00171 Triosephosphate isomerase active site. 164 174 - T 13-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_12725 7f83cefa01a91b4cb3b29bd8828273a4 250 Pfam PF00121 Triosephosphate isomerase 5 245 8.8E-87 T 13-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_12725 7f83cefa01a91b4cb3b29bd8828273a4 250 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 247 58.828 T 13-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_12725 7f83cefa01a91b4cb3b29bd8828273a4 250 SUPERFAMILY SSF51351 1 247 3.93E-85 T 13-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_12725 7f83cefa01a91b4cb3b29bd8828273a4 250 Gene3D G3DSA:3.20.20.70 1 250 1.4E-90 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_12725 7f83cefa01a91b4cb3b29bd8828273a4 250 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 238 7.6E-64 T 13-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_03775 ab8b87077cf657c0c96df310e02a1af5 430 Gene3D G3DSA:3.30.1490.20 122 191 6.4E-29 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BEN78_03775 ab8b87077cf657c0c96df310e02a1af5 430 Gene3D G3DSA:3.30.470.20 192 330 1.1E-57 T 13-10-2018 BEN78_03775 ab8b87077cf657c0c96df310e02a1af5 430 SMART SM01209 104 297 8.9E-143 T 13-10-2018 BEN78_03775 ab8b87077cf657c0c96df310e02a1af5 430 SUPERFAMILY SSF56059 105 324 1.61E-68 T 13-10-2018 BEN78_03775 ab8b87077cf657c0c96df310e02a1af5 430 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 3 426 4.1E-172 T 13-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BEN78_03775 ab8b87077cf657c0c96df310e02a1af5 430 Gene3D G3DSA:3.40.50.20 3 96 4.4E-38 T 13-10-2018 BEN78_03775 ab8b87077cf657c0c96df310e02a1af5 430 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 291 298 - T 13-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BEN78_03775 ab8b87077cf657c0c96df310e02a1af5 430 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 104 297 3.6E-82 T 13-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BEN78_03775 ab8b87077cf657c0c96df310e02a1af5 430 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 2 425 42.899 T 13-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BEN78_03775 ab8b87077cf657c0c96df310e02a1af5 430 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 423 2.6E-26 T 13-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BEN78_03775 ab8b87077cf657c0c96df310e02a1af5 430 SMART SM01210 331 425 1.2E-45 T 13-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BEN78_03775 ab8b87077cf657c0c96df310e02a1af5 430 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 3 103 3.1E-34 T 13-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BEN78_03775 ab8b87077cf657c0c96df310e02a1af5 430 SUPERFAMILY SSF51246 330 425 3.06E-29 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 BEN78_03775 ab8b87077cf657c0c96df310e02a1af5 430 SUPERFAMILY SSF52440 2 104 5.61E-36 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BEN78_03775 ab8b87077cf657c0c96df310e02a1af5 430 Gene3D G3DSA:3.90.600.10 331 430 8.9E-30 T 13-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BEN78_14000 db326b1c12b96d165deaecd6ea132f3f 1072 Gene3D G3DSA:3.30.70.1440 678 882 0.0 T 13-10-2018 BEN78_14000 db326b1c12b96d165deaecd6ea132f3f 1072 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 1.9E-91 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_14000 db326b1c12b96d165deaecd6ea132f3f 1072 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 1.9E-91 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_14000 db326b1c12b96d165deaecd6ea132f3f 1072 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.9E-91 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_14000 db326b1c12b96d165deaecd6ea132f3f 1072 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 1.9E-91 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_14000 db326b1c12b96d165deaecd6ea132f3f 1072 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 1.9E-91 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_14000 db326b1c12b96d165deaecd6ea132f3f 1072 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 1.9E-91 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_14000 db326b1c12b96d165deaecd6ea132f3f 1072 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.9E-91 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_14000 db326b1c12b96d165deaecd6ea132f3f 1072 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 1.9E-91 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_14000 db326b1c12b96d165deaecd6ea132f3f 1072 Gene3D G3DSA:3.30.70.1430 568 677 0.0 T 13-10-2018 BEN78_14000 db326b1c12b96d165deaecd6ea132f3f 1072 Pfam PF00873 AcrB/AcrD/AcrF family 1 1044 0.0 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_14000 db326b1c12b96d165deaecd6ea132f3f 1072 Gene3D G3DSA:1.20.1640.10 8 513 0.0 T 13-10-2018 BEN78_14000 db326b1c12b96d165deaecd6ea132f3f 1072 SUPERFAMILY SSF82714 732 823 1.57E-15 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN78_14000 db326b1c12b96d165deaecd6ea132f3f 1072 SUPERFAMILY SSF82693 681 873 1.67E-23 T 13-10-2018 BEN78_14000 db326b1c12b96d165deaecd6ea132f3f 1072 SUPERFAMILY SSF82714 182 271 4.32E-22 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN78_14000 db326b1c12b96d165deaecd6ea132f3f 1072 Gene3D G3DSA:1.20.1640.10 514 1040 0.0 T 13-10-2018 BEN78_14000 db326b1c12b96d165deaecd6ea132f3f 1072 SUPERFAMILY SSF82693 135 330 2.75E-23 T 13-10-2018 BEN78_14000 db326b1c12b96d165deaecd6ea132f3f 1072 Gene3D G3DSA:3.30.70.1430 38 833 0.0 T 13-10-2018 BEN78_14000 db326b1c12b96d165deaecd6ea132f3f 1072 SUPERFAMILY SSF82866 296 497 1.7E-47 T 13-10-2018 BEN78_14000 db326b1c12b96d165deaecd6ea132f3f 1072 Gene3D G3DSA:3.30.2090.10 179 275 0.0 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN78_14000 db326b1c12b96d165deaecd6ea132f3f 1072 SUPERFAMILY SSF82693 566 680 4.84E-26 T 13-10-2018 BEN78_14000 db326b1c12b96d165deaecd6ea132f3f 1072 SUPERFAMILY SSF82866 847 1044 2.88E-44 T 13-10-2018 BEN78_14000 db326b1c12b96d165deaecd6ea132f3f 1072 SUPERFAMILY SSF82693 38 131 4.81E-27 T 13-10-2018 BEN78_14000 db326b1c12b96d165deaecd6ea132f3f 1072 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1057 0.0 T 13-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 BEN78_14000 db326b1c12b96d165deaecd6ea132f3f 1072 Gene3D G3DSA:3.30.70.1320 133 332 0.0 T 13-10-2018 BEN78_14000 db326b1c12b96d165deaecd6ea132f3f 1072 Gene3D G3DSA:3.30.2090.10 731 825 0.0 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN78_01175 ce3a55205e50d439049a0e8db511e811 629 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 557 619 1.8E-21 T 13-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 BEN78_01175 ce3a55205e50d439049a0e8db511e811 629 Gene3D G3DSA:3.30.565.10 2 215 4.6E-74 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_01175 ce3a55205e50d439049a0e8db511e811 629 Pfam PF01751 Toprim domain 412 510 2.3E-12 T 13-10-2018 IPR006171 TOPRIM domain BEN78_01175 ce3a55205e50d439049a0e8db511e811 629 ProSitePatterns PS00177 DNA topoisomerase II signature. 415 423 - T 13-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BEN78_01175 ce3a55205e50d439049a0e8db511e811 629 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 171 3.1E-17 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_01175 ce3a55205e50d439049a0e8db511e811 629 Pfam PF00204 DNA gyrase B 218 383 7.5E-36 T 13-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BEN78_01175 ce3a55205e50d439049a0e8db511e811 629 SUPERFAMILY SSF56719 387 620 1.46E-73 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 BEN78_01175 ce3a55205e50d439049a0e8db511e811 629 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 4 624 1.0E-286 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BEN78_01175 ce3a55205e50d439049a0e8db511e811 629 SMART SM00387 27 173 1.1E-22 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_01175 ce3a55205e50d439049a0e8db511e811 629 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 627 46.604 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BEN78_01175 ce3a55205e50d439049a0e8db511e811 629 PRINTS PR00418 DNA topoisomerase II family signature 413 427 1.7E-57 T 13-10-2018 BEN78_01175 ce3a55205e50d439049a0e8db511e811 629 PRINTS PR00418 DNA topoisomerase II family signature 516 528 1.7E-57 T 13-10-2018 BEN78_01175 ce3a55205e50d439049a0e8db511e811 629 PRINTS PR00418 DNA topoisomerase II family signature 66 79 1.7E-57 T 13-10-2018 BEN78_01175 ce3a55205e50d439049a0e8db511e811 629 PRINTS PR00418 DNA topoisomerase II family signature 109 123 1.7E-57 T 13-10-2018 BEN78_01175 ce3a55205e50d439049a0e8db511e811 629 PRINTS PR00418 DNA topoisomerase II family signature 561 577 1.7E-57 T 13-10-2018 BEN78_01175 ce3a55205e50d439049a0e8db511e811 629 PRINTS PR00418 DNA topoisomerase II family signature 31 46 1.7E-57 T 13-10-2018 BEN78_01175 ce3a55205e50d439049a0e8db511e811 629 PRINTS PR00418 DNA topoisomerase II family signature 265 278 1.7E-57 T 13-10-2018 BEN78_01175 ce3a55205e50d439049a0e8db511e811 629 PRINTS PR00418 DNA topoisomerase II family signature 478 494 1.7E-57 T 13-10-2018 BEN78_01175 ce3a55205e50d439049a0e8db511e811 629 PRINTS PR00418 DNA topoisomerase II family signature 496 513 1.7E-57 T 13-10-2018 BEN78_01175 ce3a55205e50d439049a0e8db511e811 629 Gene3D G3DSA:3.40.50.670 389 622 1.3E-84 T 13-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BEN78_01175 ce3a55205e50d439049a0e8db511e811 629 SMART SM00433 34 623 7.8E-200 T 13-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BEN78_01175 ce3a55205e50d439049a0e8db511e811 629 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 2.2E-98 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BEN78_01175 ce3a55205e50d439049a0e8db511e811 629 PRINTS PR01098 Topoisomerase IV subunit B signature 337 360 2.2E-98 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BEN78_01175 ce3a55205e50d439049a0e8db511e811 629 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 2.2E-98 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BEN78_01175 ce3a55205e50d439049a0e8db511e811 629 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 2.2E-98 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BEN78_01175 ce3a55205e50d439049a0e8db511e811 629 PRINTS PR01098 Topoisomerase IV subunit B signature 536 558 2.2E-98 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BEN78_01175 ce3a55205e50d439049a0e8db511e811 629 PRINTS PR01098 Topoisomerase IV subunit B signature 583 597 2.2E-98 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BEN78_01175 ce3a55205e50d439049a0e8db511e811 629 PRINTS PR01098 Topoisomerase IV subunit B signature 361 386 2.2E-98 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BEN78_01175 ce3a55205e50d439049a0e8db511e811 629 PRINTS PR01098 Topoisomerase IV subunit B signature 468 480 2.2E-98 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BEN78_01175 ce3a55205e50d439049a0e8db511e811 629 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 2.2E-98 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BEN78_01175 ce3a55205e50d439049a0e8db511e811 629 PRINTS PR01098 Topoisomerase IV subunit B signature 447 468 2.2E-98 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BEN78_01175 ce3a55205e50d439049a0e8db511e811 629 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 2.2E-98 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BEN78_01175 ce3a55205e50d439049a0e8db511e811 629 PRINTS PR01098 Topoisomerase IV subunit B signature 310 325 2.2E-98 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BEN78_01175 ce3a55205e50d439049a0e8db511e811 629 PRINTS PR01098 Topoisomerase IV subunit B signature 502 518 2.2E-98 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BEN78_01175 ce3a55205e50d439049a0e8db511e811 629 PRINTS PR01098 Topoisomerase IV subunit B signature 293 309 2.2E-98 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BEN78_01175 ce3a55205e50d439049a0e8db511e811 629 Gene3D G3DSA:3.30.230.10 218 388 2.7E-51 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BEN78_01175 ce3a55205e50d439049a0e8db511e811 629 SUPERFAMILY SSF54211 217 380 7.78E-42 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BEN78_01175 ce3a55205e50d439049a0e8db511e811 629 SUPERFAMILY SSF55874 4 215 4.52E-67 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_16105 d6a1b7bdd39303160841af8e924b6d1b 313 Gene3D G3DSA:1.10.760.10 182 278 2.9E-64 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BEN78_16105 d6a1b7bdd39303160841af8e924b6d1b 313 PIRSF PIRSF000006 1 305 1.0E-84 T 13-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III BEN78_16105 d6a1b7bdd39303160841af8e924b6d1b 313 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 223 298 8.3E-9 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_16105 d6a1b7bdd39303160841af8e924b6d1b 313 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 127 188 6.0E-10 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_16105 d6a1b7bdd39303160841af8e924b6d1b 313 SUPERFAMILY SSF46626 56 214 4.36E-26 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BEN78_16105 d6a1b7bdd39303160841af8e924b6d1b 313 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 38 83 4.7E-21 T 13-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal BEN78_16105 d6a1b7bdd39303160841af8e924b6d1b 313 SUPERFAMILY SSF46626 198 308 5.44E-22 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BEN78_16105 d6a1b7bdd39303160841af8e924b6d1b 313 Gene3D G3DSA:1.20.58.1490 1 94 2.2E-32 T 13-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily BEN78_16105 d6a1b7bdd39303160841af8e924b6d1b 313 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 37 304 1.5E-67 T 13-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III BEN78_16105 d6a1b7bdd39303160841af8e924b6d1b 313 Gene3D G3DSA:1.10.760.10 103 301 2.9E-64 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BEN78_08145 a9c73adbf3111365b8ca333e20e5ae96 54 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 4 52 14.518 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_08145 a9c73adbf3111365b8ca333e20e5ae96 54 Gene3D G3DSA:2.20.28.120 1 54 1.4E-26 T 13-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_08145 a9c73adbf3111365b8ca333e20e5ae96 54 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 54 6.7E-24 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_08145 a9c73adbf3111365b8ca333e20e5ae96 54 SUPERFAMILY SSF57829 3 52 1.22E-18 T 13-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 BEN78_08145 a9c73adbf3111365b8ca333e20e5ae96 54 Pfam PF00471 Ribosomal protein L33 7 52 3.8E-18 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_08145 a9c73adbf3111365b8ca333e20e5ae96 54 ProSitePatterns PS00582 Ribosomal protein L33 signature. 20 39 - T 13-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_00250 4380aa01dfa3ec605be050c21c178fac 386 SMART SM00244 78 238 1.3E-33 T 13-10-2018 IPR001107 Band 7 domain BEN78_00250 4380aa01dfa3ec605be050c21c178fac 386 SUPERFAMILY SSF117892 111 244 1.07E-23 T 13-10-2018 IPR036013 Band 7/SPFH domain superfamily BEN78_00250 4380aa01dfa3ec605be050c21c178fac 386 TIGRFAM TIGR01933 hflK: HflK protein 81 337 1.6E-89 T 13-10-2018 IPR010201 HflK GO:0016021 BEN78_00250 4380aa01dfa3ec605be050c21c178fac 386 Gene3D G3DSA:3.30.479.30 109 240 4.0E-19 T 13-10-2018 BEN78_00250 4380aa01dfa3ec605be050c21c178fac 386 Pfam PF01145 SPFH domain / Band 7 family 83 251 3.3E-27 T 13-10-2018 IPR001107 Band 7 domain BEN78_00250 4380aa01dfa3ec605be050c21c178fac 386 PRINTS PR00721 Stomatin signature 85 107 2.7E-10 T 13-10-2018 IPR001972 Stomatin family GO:0016020 BEN78_00250 4380aa01dfa3ec605be050c21c178fac 386 PRINTS PR00721 Stomatin signature 168 185 2.7E-10 T 13-10-2018 IPR001972 Stomatin family GO:0016020 BEN78_00250 4380aa01dfa3ec605be050c21c178fac 386 PRINTS PR00721 Stomatin signature 214 232 2.7E-10 T 13-10-2018 IPR001972 Stomatin family GO:0016020 BEN78_00250 4380aa01dfa3ec605be050c21c178fac 386 PRINTS PR00721 Stomatin signature 133 154 2.7E-10 T 13-10-2018 IPR001972 Stomatin family GO:0016020 BEN78_07740 d2de3569c1dcddb8b8e2ae2567a51922 317 Gene3D G3DSA:3.90.1720.10 13 194 3.4E-7 T 13-10-2018 BEN78_07740 d2de3569c1dcddb8b8e2ae2567a51922 317 SUPERFAMILY SSF54001 17 182 2.16E-15 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BEN78_16150 43bc5bd700fbfc4437a5ffb8aca9e579 249 SUPERFAMILY SSF46689 197 247 1.57E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN78_16150 43bc5bd700fbfc4437a5ffb8aca9e579 249 SUPERFAMILY SSF46689 145 194 2.46E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN78_16150 43bc5bd700fbfc4437a5ffb8aca9e579 249 Pfam PF12833 Helix-turn-helix domain 167 246 4.1E-23 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BEN78_16150 43bc5bd700fbfc4437a5ffb8aca9e579 249 SMART SM00342 161 244 9.7E-26 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BEN78_16150 43bc5bd700fbfc4437a5ffb8aca9e579 249 Gene3D G3DSA:1.10.10.60 146 249 1.5E-26 T 13-10-2018 BEN78_03870 d465f6da3deafed8bc7c3797930d1662 322 SUPERFAMILY SSF46785 2 47 1.77E-6 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_03870 d465f6da3deafed8bc7c3797930d1662 322 Pfam PF08279 HTH domain 6 60 4.6E-11 T 13-10-2018 IPR013196 Helix-turn-helix, type 11 BEN78_03870 d465f6da3deafed8bc7c3797930d1662 322 Gene3D G3DSA:1.10.10.10 1 63 5.6E-8 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_03870 d465f6da3deafed8bc7c3797930d1662 322 Pfam PF13280 WYL domain 144 314 1.2E-36 T 13-10-2018 IPR026881 WYL domain BEN78_09270 9d9bfb4fff47126eb52e86f24900f88c 140 Gene3D G3DSA:3.40.50.10110 1 139 2.5E-35 T 13-10-2018 IPR036768 DNA polymerase III subunit chi superfamily BEN78_09270 9d9bfb4fff47126eb52e86f24900f88c 140 Pfam PF04364 DNA polymerase III chi subunit, HolC 2 135 1.7E-32 T 13-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 BEN78_09270 9d9bfb4fff47126eb52e86f24900f88c 140 SUPERFAMILY SSF102400 1 139 9.29E-35 T 13-10-2018 IPR036768 DNA polymerase III subunit chi superfamily BEN78_04590 46bbc296aecaa46a9215181af4881279 1036 Gene3D G3DSA:2.130.10.10 35 176 1.2E-24 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BEN78_04590 46bbc296aecaa46a9215181af4881279 1036 SUPERFAMILY SSF63829 318 493 9.81E-6 T 13-10-2018 BEN78_04590 46bbc296aecaa46a9215181af4881279 1036 Gene3D G3DSA:2.130.10.10 301 426 8.8E-13 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BEN78_04590 46bbc296aecaa46a9215181af4881279 1036 Gene3D G3DSA:3.30.70.270 807 994 4.0E-46 T 13-10-2018 BEN78_04590 46bbc296aecaa46a9215181af4881279 1036 Pfam PF00990 Diguanylate cyclase, GGDEF domain 824 990 4.4E-34 T 13-10-2018 IPR000160 GGDEF domain BEN78_04590 46bbc296aecaa46a9215181af4881279 1036 SMART SM00267 811 995 1.9E-41 T 13-10-2018 IPR000160 GGDEF domain BEN78_04590 46bbc296aecaa46a9215181af4881279 1036 SUPERFAMILY SSF63829 495 624 2.52E-10 T 13-10-2018 BEN78_04590 46bbc296aecaa46a9215181af4881279 1036 Gene3D G3DSA:2.130.10.10 427 631 1.4E-37 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BEN78_04590 46bbc296aecaa46a9215181af4881279 1036 Pfam PF07494 Two component regulator propeller 553 575 0.0055 T 13-10-2018 IPR011110 Two component regulator propeller BEN78_04590 46bbc296aecaa46a9215181af4881279 1036 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 820 992 3.1E-33 T 13-10-2018 IPR000160 GGDEF domain BEN78_04590 46bbc296aecaa46a9215181af4881279 1036 SUPERFAMILY SSF63829 57 331 2.09E-10 T 13-10-2018 BEN78_04590 46bbc296aecaa46a9215181af4881279 1036 SUPERFAMILY SSF55073 827 993 2.28E-36 T 13-10-2018 IPR029787 Nucleotide cyclase BEN78_04590 46bbc296aecaa46a9215181af4881279 1036 Gene3D G3DSA:2.60.40.10 635 761 2.9E-16 T 13-10-2018 IPR013783 Immunoglobulin-like fold BEN78_15315 9c413d65632f3c7203e2b55cfa667481 395 Pfam PF04055 Radical SAM superfamily 122 294 3.5E-17 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BEN78_15315 9c413d65632f3c7203e2b55cfa667481 395 Gene3D G3DSA:1.10.150.530 17 79 2.5E-25 T 13-10-2018 BEN78_15315 9c413d65632f3c7203e2b55cfa667481 395 SUPERFAMILY SSF102114 114 346 2.35E-15 T 13-10-2018 BEN78_15315 9c413d65632f3c7203e2b55cfa667481 395 Gene3D G3DSA:3.20.20.70 80 356 2.3E-104 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_15315 9c413d65632f3c7203e2b55cfa667481 395 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 17 371 73.106 T 13-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 BEN78_15315 9c413d65632f3c7203e2b55cfa667481 395 PIRSF PIRSF006004 12 384 6.3E-147 T 13-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 BEN78_15315 9c413d65632f3c7203e2b55cfa667481 395 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 16 375 9.0E-134 T 13-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 BEN78_09825 881b92d2ede28de5a3c33a9c779aa201 180 Hamap MF_01405 dITP/XTP pyrophosphatase. 1 177 44.693 T 13-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 BEN78_09825 881b92d2ede28de5a3c33a9c779aa201 180 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 175 1.6E-48 T 13-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 BEN78_09825 881b92d2ede28de5a3c33a9c779aa201 180 Gene3D G3DSA:3.90.950.10 1 178 7.6E-68 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like BEN78_09825 881b92d2ede28de5a3c33a9c779aa201 180 SUPERFAMILY SSF52972 1 176 7.85E-63 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like BEN78_09825 881b92d2ede28de5a3c33a9c779aa201 180 Pfam PF01725 Ham1 family 15 173 1.7E-48 T 13-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 BEN78_00035 1a817861da9af784eefbfd60a428a9a2 319 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 3 220 1.2E-52 T 13-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 BEN78_00035 1a817861da9af784eefbfd60a428a9a2 319 SMART SM01092 226 314 1.6E-19 T 13-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal BEN78_00035 1a817861da9af784eefbfd60a428a9a2 319 Gene3D G3DSA:3.30.465.10 1 222 6.2E-87 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 BEN78_00035 1a817861da9af784eefbfd60a428a9a2 319 Gene3D G3DSA:3.30.390.50 223 317 1.2E-25 T 13-10-2018 BEN78_00035 1a817861da9af784eefbfd60a428a9a2 319 SUPERFAMILY SSF56176 1 220 1.91E-60 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BEN78_00035 1a817861da9af784eefbfd60a428a9a2 319 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 227 277 2.1E-5 T 13-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal BEN78_00035 1a817861da9af784eefbfd60a428a9a2 319 SUPERFAMILY SSF55447 224 315 1.57E-19 T 13-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily BEN78_00975 ad088c38eac42c27fce929746b3d0fa8 839 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 1 839 24.315 T 13-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 BEN78_00975 ad088c38eac42c27fce929746b3d0fa8 839 Gene3D G3DSA:3.10.20.310 371 448 2.6E-24 T 13-10-2018 BEN78_00975 ad088c38eac42c27fce929746b3d0fa8 839 PIRSF PIRSF006076 4 839 1.6E-246 T 13-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 BEN78_00975 ad088c38eac42c27fce929746b3d0fa8 839 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 49 813 5.1E-236 T 13-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 BEN78_00975 ad088c38eac42c27fce929746b3d0fa8 839 Pfam PF07244 Surface antigen variable number repeat 291 369 1.3E-11 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 BEN78_00975 ad088c38eac42c27fce929746b3d0fa8 839 Pfam PF07244 Surface antigen variable number repeat 118 197 3.8E-11 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 BEN78_00975 ad088c38eac42c27fce929746b3d0fa8 839 Pfam PF07244 Surface antigen variable number repeat 201 288 8.2E-11 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 BEN78_00975 ad088c38eac42c27fce929746b3d0fa8 839 Pfam PF07244 Surface antigen variable number repeat 50 116 5.1E-5 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 BEN78_00975 ad088c38eac42c27fce929746b3d0fa8 839 Pfam PF07244 Surface antigen variable number repeat 373 447 2.5E-14 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 BEN78_00975 ad088c38eac42c27fce929746b3d0fa8 839 Gene3D G3DSA:2.40.160.50 687 839 1.0E-39 T 13-10-2018 BEN78_00975 ad088c38eac42c27fce929746b3d0fa8 839 Gene3D G3DSA:3.10.20.310 44 116 7.5E-20 T 13-10-2018 BEN78_00975 ad088c38eac42c27fce929746b3d0fa8 839 Gene3D G3DSA:3.10.20.310 200 291 2.8E-18 T 13-10-2018 BEN78_00975 ad088c38eac42c27fce929746b3d0fa8 839 Gene3D G3DSA:3.10.20.310 292 370 2.4E-18 T 13-10-2018 BEN78_00975 ad088c38eac42c27fce929746b3d0fa8 839 Pfam PF01103 Surface antigen 475 839 2.6E-72 T 13-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 BEN78_00975 ad088c38eac42c27fce929746b3d0fa8 839 Gene3D G3DSA:2.40.160.50 454 674 9.9E-59 T 13-10-2018 BEN78_00975 ad088c38eac42c27fce929746b3d0fa8 839 Gene3D G3DSA:3.10.20.310 117 198 4.5E-18 T 13-10-2018 BEN78_09195 37465747b1a332be7d22c17e23156988 148 Gene3D G3DSA:2.40.160.20 12 147 2.3E-10 T 13-10-2018 BEN78_09195 37465747b1a332be7d22c17e23156988 148 Pfam PF09411 Lipid A 3-O-deacylase (PagL) 47 145 4.0E-7 T 13-10-2018 IPR018550 Lipid A 3-O-deacylase-related BEN78_01450 125c4f5eaa44c8b22891bb0906b7077d 965 Pfam PF15979 Glycosyl hydrolase family 115 200 531 1.0E-145 T 13-10-2018 IPR031924 Glycosyl hydrolase family 115 BEN78_01450 125c4f5eaa44c8b22891bb0906b7077d 965 SUPERFAMILY SSF55545 71 184 1.2E-5 T 13-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 BEN78_01450 125c4f5eaa44c8b22891bb0906b7077d 965 Gene3D G3DSA:1.20.58.2150 489 667 6.2E-68 T 13-10-2018 BEN78_01450 125c4f5eaa44c8b22891bb0906b7077d 965 Gene3D G3DSA:3.20.20.520 204 488 1.0E-125 T 13-10-2018 BEN78_01450 125c4f5eaa44c8b22891bb0906b7077d 965 Gene3D G3DSA:3.30.379.10 44 203 1.1E-44 T 13-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 BEN78_01450 125c4f5eaa44c8b22891bb0906b7077d 965 Gene3D G3DSA:2.60.120.1620 782 965 3.1E-47 T 13-10-2018 BEN78_15900 4750f32ee17b90858c22b09469a8d917 457 Pfam PF01494 FAD binding domain 7 356 1.7E-21 T 13-10-2018 IPR002938 FAD-binding domain GO:0071949 BEN78_15900 4750f32ee17b90858c22b09469a8d917 457 Hamap MF_01971 Kynurenine 3-monooxygenase [kmo]. 3 446 26.563 T 13-10-2018 IPR027545 Kynurenine 3-monooxygenase GO:0004502|GO:0006569|GO:0019805 KEGG: 00380+1.14.13.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7765|Reactome: R-HSA-71240 BEN78_15900 4750f32ee17b90858c22b09469a8d917 457 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 4.6E-17 T 13-10-2018 BEN78_15900 4750f32ee17b90858c22b09469a8d917 457 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 155 170 4.6E-17 T 13-10-2018 BEN78_15900 4750f32ee17b90858c22b09469a8d917 457 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 298 313 4.6E-17 T 13-10-2018 BEN78_15900 4750f32ee17b90858c22b09469a8d917 457 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 313 329 4.6E-17 T 13-10-2018 BEN78_15900 4750f32ee17b90858c22b09469a8d917 457 Gene3D G3DSA:3.50.50.60 4 385 1.7E-112 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_15900 4750f32ee17b90858c22b09469a8d917 457 SUPERFAMILY SSF51905 7 409 4.1E-47 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_05885 ff8be4e3b0833339462f35def113c5ad 327 Pfam PF10017 Histidine-specific methyltransferase, SAM-dependent 25 325 1.4E-99 T 13-10-2018 IPR019257 Histidine-specific methyltransferase, SAM-dependent BEN78_05885 ff8be4e3b0833339462f35def113c5ad 327 Gene3D G3DSA:3.40.50.150 51 229 5.9E-46 T 13-10-2018 BEN78_05885 ff8be4e3b0833339462f35def113c5ad 327 TIGRFAM TIGR03438 egtD_ergothio: dimethylhistidine N-methyltransferase 24 323 2.5E-117 T 13-10-2018 IPR035094 Histidine N-alpha-methyltransferase KEGG: 00340+2.1.1.44|MetaCyc: PWY-7255|MetaCyc: PWY-7550 BEN78_05885 ff8be4e3b0833339462f35def113c5ad 327 PIRSF PIRSF018005 1 327 5.8E-125 T 13-10-2018 IPR017804 Methyltransferase EgtD-like GO:0008168 BEN78_05885 ff8be4e3b0833339462f35def113c5ad 327 SUPERFAMILY SSF53335 23 319 7.77E-12 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_04240 fb17a84c3692d795734809d16c07aae5 842 Pfam PF02687 FtsX-like permease family 748 830 1.2E-5 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BEN78_04240 fb17a84c3692d795734809d16c07aae5 842 Pfam PF02687 FtsX-like permease family 289 378 5.7E-7 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BEN78_03205 a0de623a503dd31f2afaf1ef21b0e4b4 257 Pfam PF01936 NYN domain 11 145 2.5E-33 T 13-10-2018 IPR021139 NYN domain, limkain-b1-type BEN78_03205 a0de623a503dd31f2afaf1ef21b0e4b4 257 Gene3D G3DSA:3.40.50.1010 4 149 2.2E-13 T 13-10-2018 BEN78_03205 a0de623a503dd31f2afaf1ef21b0e4b4 257 Pfam PF12872 OST-HTH/LOTUS domain 171 234 8.7E-14 T 13-10-2018 IPR025605 OST-HTH/LOTUS domain BEN78_03205 a0de623a503dd31f2afaf1ef21b0e4b4 257 Gene3D G3DSA:1.10.10.1880 176 241 5.7E-20 T 13-10-2018 BEN78_11570 5356193adb37428ff95e6dd6972d8ae3 433 Gene3D G3DSA:3.90.226.10 121 282 5.6E-11 T 13-10-2018 BEN78_11570 5356193adb37428ff95e6dd6972d8ae3 433 SUPERFAMILY SSF52096 120 274 2.19E-10 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BEN78_06460 01a6ac6b3822b4ad953770b0a7ab1383 353 SUPERFAMILY SSF74653 271 337 3.92E-20 T 13-10-2018 BEN78_06460 01a6ac6b3822b4ad953770b0a7ab1383 353 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 277 348 4.0E-19 T 13-10-2018 IPR037682 TonB, C-terminal GO:0055085 BEN78_06460 01a6ac6b3822b4ad953770b0a7ab1383 353 Gene3D G3DSA:3.30.2420.10 272 348 7.7E-23 T 13-10-2018 BEN78_06460 01a6ac6b3822b4ad953770b0a7ab1383 353 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 279 349 2.0E-18 T 13-10-2018 IPR006260 TonB/TolA, C-terminal BEN78_05155 a612cd0c58109c907933d65b81e4f29e 204 Gene3D G3DSA:1.10.357.10 65 204 1.0E-36 T 13-10-2018 BEN78_05155 a612cd0c58109c907933d65b81e4f29e 204 ProSitePatterns PS01081 TetR-type HTH domain signature. 30 60 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BEN78_05155 a612cd0c58109c907933d65b81e4f29e 204 SUPERFAMILY SSF46689 6 73 3.09E-19 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN78_05155 a612cd0c58109c907933d65b81e4f29e 204 Gene3D G3DSA:1.10.10.60 7 62 8.3E-25 T 13-10-2018 BEN78_05155 a612cd0c58109c907933d65b81e4f29e 204 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 149 203 4.9E-21 T 13-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type BEN78_05155 a612cd0c58109c907933d65b81e4f29e 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 64 3.4E-19 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN78_05155 a612cd0c58109c907933d65b81e4f29e 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 3.5E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN78_05155 a612cd0c58109c907933d65b81e4f29e 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 3.5E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN78_05155 a612cd0c58109c907933d65b81e4f29e 204 SUPERFAMILY SSF48498 84 201 4.89E-12 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BEN78_08285 0cc1fe2a3d79686dfb9e01aee7d1497b 314 SUPERFAMILY SSF48576 7 287 1.3E-79 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily BEN78_08285 0cc1fe2a3d79686dfb9e01aee7d1497b 314 Gene3D G3DSA:1.10.600.10 1 288 1.0E-79 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily BEN78_08285 0cc1fe2a3d79686dfb9e01aee7d1497b 314 ProSitePatterns PS01045 Squalene and phytoene synthases signature 2. 163 188 - T 13-10-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 BEN78_08285 0cc1fe2a3d79686dfb9e01aee7d1497b 314 ProSitePatterns PS01044 Squalene and phytoene synthases signature 1. 133 148 - T 13-10-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 BEN78_08285 0cc1fe2a3d79686dfb9e01aee7d1497b 314 Pfam PF00494 Squalene/phytoene synthase 16 274 1.5E-68 T 13-10-2018 BEN78_11375 4fedc975f4f87b2b95e423b0578fb36c 424 Gene3D G3DSA:3.40.1190.10 1 284 3.4E-82 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BEN78_11375 4fedc975f4f87b2b95e423b0578fb36c 424 SUPERFAMILY SSF53623 5 283 2.22E-82 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BEN78_11375 4fedc975f4f87b2b95e423b0578fb36c 424 Pfam PF02875 Mur ligase family, glutamate ligase domain 285 349 1.2E-6 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 BEN78_11375 4fedc975f4f87b2b95e423b0578fb36c 424 Pfam PF08245 Mur ligase middle domain 48 199 2.3E-8 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 BEN78_11375 4fedc975f4f87b2b95e423b0578fb36c 424 TIGRFAM TIGR01499 folC: bifunctional protein FolC 26 417 4.9E-87 T 13-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 BEN78_11375 4fedc975f4f87b2b95e423b0578fb36c 424 SUPERFAMILY SSF53244 285 420 5.8E-25 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BEN78_11375 4fedc975f4f87b2b95e423b0578fb36c 424 PIRSF PIRSF001563 1 423 6.9E-93 T 13-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 BEN78_11375 4fedc975f4f87b2b95e423b0578fb36c 424 Gene3D G3DSA:3.90.190.20 287 422 1.7E-26 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BEN78_06300 7eb4c949f301ceffd2fdc7474fc05f39 715 Gene3D G3DSA:2.40.170.20 181 712 1.2E-91 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_06300 7eb4c949f301ceffd2fdc7474fc05f39 715 Gene3D G3DSA:2.170.130.10 40 169 1.6E-13 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_06300 7eb4c949f301ceffd2fdc7474fc05f39 715 SUPERFAMILY SSF56935 32 713 8.83E-100 T 13-10-2018 BEN78_06300 7eb4c949f301ceffd2fdc7474fc05f39 715 Pfam PF00593 TonB dependent receptor 237 712 1.6E-44 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_06300 7eb4c949f301ceffd2fdc7474fc05f39 715 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 165 3.1E-13 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_10785 73240181c3979100c6c36cd04e0e0fe1 160 SUPERFAMILY SSF53098 15 150 3.95E-30 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily BEN78_10785 73240181c3979100c6c36cd04e0e0fe1 160 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 15 153 21.309 T 13-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 BEN78_10785 73240181c3979100c6c36cd04e0e0fe1 160 SMART SM00732 15 115 7.3E-25 T 13-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 BEN78_10785 73240181c3979100c6c36cd04e0e0fe1 160 Gene3D G3DSA:3.30.420.140 13 151 1.5E-34 T 13-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 BEN78_10785 73240181c3979100c6c36cd04e0e0fe1 160 Pfam PF03652 Holliday junction resolvase 16 150 4.2E-32 T 13-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 BEN78_10785 73240181c3979100c6c36cd04e0e0fe1 160 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 18 149 2.5E-28 T 13-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 BEN78_10005 e90a5268f39bbc2672be5853cb340db9 154 Gene3D G3DSA:3.30.70.1290 9 153 7.0E-18 T 13-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 BEN78_10005 e90a5268f39bbc2672be5853cb340db9 154 SUPERFAMILY SSF143422 10 130 2.75E-19 T 13-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 BEN78_10005 e90a5268f39bbc2672be5853cb340db9 154 Pfam PF01797 Transposase IS200 like 16 109 1.5E-9 T 13-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 BEN78_10005 e90a5268f39bbc2672be5853cb340db9 154 SMART SM01321 13 127 2.1E-16 T 13-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 BEN78_02850 ed07682855adc7e68412940d97ae3187 173 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 13 160 1.3E-32 T 13-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 BEN78_02850 ed07682855adc7e68412940d97ae3187 173 Hamap MF_02201 Ferredoxin-type protein NapF [napF]. 30 166 21.322 T 13-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 BEN78_02850 ed07682855adc7e68412940d97ae3187 173 SUPERFAMILY SSF54862 37 163 4.39E-18 T 13-10-2018 BEN78_02850 ed07682855adc7e68412940d97ae3187 173 Gene3D G3DSA:3.30.70.20 102 173 5.0E-10 T 13-10-2018 BEN78_02850 ed07682855adc7e68412940d97ae3187 173 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 145 156 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BEN78_02850 ed07682855adc7e68412940d97ae3187 173 Pfam PF12838 4Fe-4S dicluster domain 113 159 1.2E-6 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BEN78_02850 ed07682855adc7e68412940d97ae3187 173 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 42 53 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BEN78_02850 ed07682855adc7e68412940d97ae3187 173 Pfam PF13187 4Fe-4S dicluster domain 41 86 1.6E-7 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BEN78_02850 ed07682855adc7e68412940d97ae3187 173 Gene3D G3DSA:3.30.70.20 38 89 2.2E-9 T 13-10-2018 BEN78_16765 402c82605f19e8af428e235c1a02a736 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 244 1.2E-64 T 13-10-2018 BEN78_16765 402c82605f19e8af428e235c1a02a736 247 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 10 245 3.9E-98 T 13-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BEN78_16765 402c82605f19e8af428e235c1a02a736 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BEN78_16765 402c82605f19e8af428e235c1a02a736 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 190 0.0021 T 13-10-2018 BEN78_16765 402c82605f19e8af428e235c1a02a736 247 SUPERFAMILY SSF51735 7 246 1.86E-81 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_16765 402c82605f19e8af428e235c1a02a736 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.9E-48 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_16765 402c82605f19e8af428e235c1a02a736 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.9E-48 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_16765 402c82605f19e8af428e235c1a02a736 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.9E-48 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_16765 402c82605f19e8af428e235c1a02a736 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 1.9E-48 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_16765 402c82605f19e8af428e235c1a02a736 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.9E-48 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_16765 402c82605f19e8af428e235c1a02a736 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.9E-48 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_16765 402c82605f19e8af428e235c1a02a736 247 Gene3D G3DSA:3.40.50.720 2 247 2.6E-83 T 13-10-2018 BEN78_16765 402c82605f19e8af428e235c1a02a736 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 3.7E-15 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_16765 402c82605f19e8af428e235c1a02a736 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 3.7E-15 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_16765 402c82605f19e8af428e235c1a02a736 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 3.7E-15 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_09235 8390b6888acd06bb1db21aaea6fb6f37 506 Gene3D G3DSA:3.40.1080.20 343 484 4.7E-41 T 13-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily BEN78_09235 8390b6888acd06bb1db21aaea6fb6f37 506 SUPERFAMILY SSF100950 3 228 7.33E-73 T 13-10-2018 IPR037171 NagB/RpiA transferase-like BEN78_09235 8390b6888acd06bb1db21aaea6fb6f37 506 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 335 469 7.8E-44 T 13-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain BEN78_09235 8390b6888acd06bb1db21aaea6fb6f37 506 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 12 502 3.8E-236 T 13-10-2018 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 BEN78_09235 8390b6888acd06bb1db21aaea6fb6f37 506 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 14 221 1.2E-31 T 13-10-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 BEN78_09235 8390b6888acd06bb1db21aaea6fb6f37 506 Gene3D G3DSA:3.40.1080.10 7 182 1.8E-13 T 13-10-2018 BEN78_09235 8390b6888acd06bb1db21aaea6fb6f37 506 SUPERFAMILY SSF100950 231 502 3.16E-83 T 13-10-2018 IPR037171 NagB/RpiA transferase-like BEN78_09235 8390b6888acd06bb1db21aaea6fb6f37 506 Gene3D G3DSA:3.30.750.70 233 325 6.2E-9 T 13-10-2018 BEN78_13550 ddea1b0c6316b515d61f72d5672a9818 197 Pfam PF03641 Possible lysine decarboxylase 46 165 6.9E-39 T 13-10-2018 IPR031100 LOG family BEN78_13550 ddea1b0c6316b515d61f72d5672a9818 197 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 2 178 1.2E-56 T 13-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG BEN78_13550 ddea1b0c6316b515d61f72d5672a9818 197 Gene3D G3DSA:3.40.50.450 1 195 2.8E-73 T 13-10-2018 BEN78_13550 ddea1b0c6316b515d61f72d5672a9818 197 SUPERFAMILY SSF102405 1 179 2.14E-61 T 13-10-2018 BEN78_14825 a71433e023d6f2c7ac4677849ccebd41 108 Pfam PF11740 Plasmid replication region DNA-binding N-term 6 102 1.3E-22 T 13-10-2018 IPR021104 KfrA, N-terminal DNA-binding domain BEN78_05520 df966698027cc648d98ba95f8abee7d9 678 Gene3D G3DSA:3.40.30.60 359 487 3.0E-8 T 13-10-2018 BEN78_05520 df966698027cc648d98ba95f8abee7d9 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 72 91 7.8E-54 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BEN78_05520 df966698027cc648d98ba95f8abee7d9 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 183 200 7.8E-54 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BEN78_05520 df966698027cc648d98ba95f8abee7d9 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 153 171 7.8E-54 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BEN78_05520 df966698027cc648d98ba95f8abee7d9 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 35 48 7.8E-54 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BEN78_05520 df966698027cc648d98ba95f8abee7d9 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 134 150 7.8E-54 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BEN78_05520 df966698027cc648d98ba95f8abee7d9 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 234 248 7.8E-54 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BEN78_05520 df966698027cc648d98ba95f8abee7d9 678 Gene3D G3DSA:1.10.8.540 488 577 1.0E-26 T 13-10-2018 BEN78_05520 df966698027cc648d98ba95f8abee7d9 678 TIGRFAM TIGR01399 hrcV: type III secretion protein, HrcV family 16 674 3.7E-224 T 13-10-2018 IPR006302 Type III secretion protein HrcV GO:0015031|GO:0016021 BEN78_05520 df966698027cc648d98ba95f8abee7d9 678 Pfam PF00771 FHIPEP family 28 668 1.1E-203 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BEN78_05520 df966698027cc648d98ba95f8abee7d9 678 PIRSF PIRSF005419 11 678 2.8E-213 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BEN78_05520 df966698027cc648d98ba95f8abee7d9 678 Gene3D G3DSA:1.10.490.80 579 676 3.5E-23 T 13-10-2018 BEN78_06500 e82e61e360aeb7632eff35df43890b02 322 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN78_06500 e82e61e360aeb7632eff35df43890b02 322 Pfam PF00005 ABC transporter 30 174 3.3E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_06500 e82e61e360aeb7632eff35df43890b02 322 SUPERFAMILY SSF52540 12 242 9.32E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_06500 e82e61e360aeb7632eff35df43890b02 322 Gene3D G3DSA:3.40.50.300 8 242 9.2E-63 T 13-10-2018 BEN78_06500 e82e61e360aeb7632eff35df43890b02 322 SMART SM00382 39 230 6.7E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_08705 724578fa719bb7101dc23a639d36de0e 233 Gene3D G3DSA:1.20.1080.10 2 230 9.9E-75 T 13-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 BEN78_08705 724578fa719bb7101dc23a639d36de0e 233 Pfam PF00230 Major intrinsic protein 2 223 1.4E-46 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BEN78_08705 724578fa719bb7101dc23a639d36de0e 233 ProSitePatterns PS00221 MIP family signature. 62 70 - T 13-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 BEN78_08705 724578fa719bb7101dc23a639d36de0e 233 SUPERFAMILY SSF81338 3 229 2.75E-60 T 13-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 BEN78_08705 724578fa719bb7101dc23a639d36de0e 233 TIGRFAM TIGR00861 MIP: MIP family channel proteins 8 222 1.3E-53 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BEN78_08705 724578fa719bb7101dc23a639d36de0e 233 PRINTS PR00783 Major intrinsic protein family signature 44 68 1.3E-50 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BEN78_08705 724578fa719bb7101dc23a639d36de0e 233 PRINTS PR00783 Major intrinsic protein family signature 167 189 1.3E-50 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BEN78_08705 724578fa719bb7101dc23a639d36de0e 233 PRINTS PR00783 Major intrinsic protein family signature 137 155 1.3E-50 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BEN78_08705 724578fa719bb7101dc23a639d36de0e 233 PRINTS PR00783 Major intrinsic protein family signature 4 23 1.3E-50 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BEN78_08705 724578fa719bb7101dc23a639d36de0e 233 PRINTS PR00783 Major intrinsic protein family signature 81 100 1.3E-50 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BEN78_08705 724578fa719bb7101dc23a639d36de0e 233 PRINTS PR00783 Major intrinsic protein family signature 206 226 1.3E-50 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BEN78_11035 99f993e16c8a863ed19639b98195c2fb 233 Pfam PF00687 Ribosomal protein L1p/L10e family 30 220 7.3E-47 T 13-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein BEN78_11035 99f993e16c8a863ed19639b98195c2fb 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 40.933 T 13-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 BEN78_11035 99f993e16c8a863ed19639b98195c2fb 233 Gene3D G3DSA:3.40.50.790 67 159 1.0E-74 T 13-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich BEN78_11035 99f993e16c8a863ed19639b98195c2fb 233 PIRSF PIRSF002155 1 227 1.7E-73 T 13-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11035 99f993e16c8a863ed19639b98195c2fb 233 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 2.9E-100 T 13-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 BEN78_11035 99f993e16c8a863ed19639b98195c2fb 233 Gene3D G3DSA:3.30.190.20 20 224 1.0E-74 T 13-10-2018 BEN78_11035 99f993e16c8a863ed19639b98195c2fb 233 SUPERFAMILY SSF56808 5 225 2.22E-75 T 13-10-2018 IPR023674 Ribosomal protein L1-like BEN78_11035 99f993e16c8a863ed19639b98195c2fb 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 13-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_13775 1f7a34d47ff299837af0cbf6763145ef 366 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 218 299 7.9E-12 T 13-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BEN78_13775 1f7a34d47ff299837af0cbf6763145ef 366 Gene3D G3DSA:3.40.50.720 133 335 3.5E-144 T 13-10-2018 BEN78_13775 1f7a34d47ff299837af0cbf6763145ef 366 SUPERFAMILY SSF51735 140 342 3.09E-52 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_13775 1f7a34d47ff299837af0cbf6763145ef 366 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 14 130 3.4E-28 T 13-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BEN78_13775 1f7a34d47ff299837af0cbf6763145ef 366 SMART SM00839 143 350 2.3E-69 T 13-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BEN78_13775 1f7a34d47ff299837af0cbf6763145ef 366 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 175 195 3.7E-19 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BEN78_13775 1f7a34d47ff299837af0cbf6763145ef 366 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 285 296 3.7E-19 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BEN78_13775 1f7a34d47ff299837af0cbf6763145ef 366 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 65 79 3.7E-19 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BEN78_13775 1f7a34d47ff299837af0cbf6763145ef 366 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 131 153 3.7E-19 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BEN78_13775 1f7a34d47ff299837af0cbf6763145ef 366 PIRSF PIRSF000188 1 351 2.2E-155 T 13-10-2018 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 BEN78_13775 1f7a34d47ff299837af0cbf6763145ef 366 SUPERFAMILY SSF53223 3 143 1.95E-50 T 13-10-2018 BEN78_13775 1f7a34d47ff299837af0cbf6763145ef 366 Gene3D G3DSA:3.40.50.10860 9 342 3.5E-144 T 13-10-2018 BEN78_13775 1f7a34d47ff299837af0cbf6763145ef 366 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 73 86 - T 13-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BEN78_14555 359aa5de9f80aa88f891d674960671b0 469 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 6 49 1.7E-11 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BEN78_14555 359aa5de9f80aa88f891d674960671b0 469 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 439 446 - T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BEN78_14555 359aa5de9f80aa88f891d674960671b0 469 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 458 1.1E-108 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BEN78_14555 359aa5de9f80aa88f891d674960671b0 469 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 351 370 - T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BEN78_14555 359aa5de9f80aa88f891d674960671b0 469 Gene3D G3DSA:1.10.10.1330 108 211 4.4E-15 T 13-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily BEN78_14555 359aa5de9f80aa88f891d674960671b0 469 PRINTS PR00045 Sigma-54 factor signature 175 192 6.0E-28 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BEN78_14555 359aa5de9f80aa88f891d674960671b0 469 PRINTS PR00045 Sigma-54 factor signature 434 452 6.0E-28 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BEN78_14555 359aa5de9f80aa88f891d674960671b0 469 PRINTS PR00045 Sigma-54 factor signature 379 390 6.0E-28 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BEN78_14555 359aa5de9f80aa88f891d674960671b0 469 PRINTS PR00045 Sigma-54 factor signature 363 375 6.0E-28 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BEN78_14555 359aa5de9f80aa88f891d674960671b0 469 Pfam PF04963 Sigma-54 factor, core binding domain 115 292 2.5E-36 T 13-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 BEN78_14555 359aa5de9f80aa88f891d674960671b0 469 Pfam PF04552 Sigma-54, DNA binding domain 306 458 8.1E-56 T 13-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding BEN78_14555 359aa5de9f80aa88f891d674960671b0 469 Gene3D G3DSA:1.10.10.60 401 458 7.6E-21 T 13-10-2018 BEN78_14555 359aa5de9f80aa88f891d674960671b0 469 PIRSF PIRSF000774 1 461 3.0E-112 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BEN78_01935 0050e59208b67fb19bbf5967acf5150d 154 SUPERFAMILY SSF52255 1 152 1.83E-62 T 13-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 BEN78_01935 0050e59208b67fb19bbf5967acf5150d 154 Pfam PF00731 AIR carboxylase 1 144 5.7E-60 T 13-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 BEN78_01935 0050e59208b67fb19bbf5967acf5150d 154 PIRSF PIRSF001338 1 154 2.0E-63 T 13-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 BEN78_01935 0050e59208b67fb19bbf5967acf5150d 154 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 1 151 5.7E-63 T 13-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 BEN78_01935 0050e59208b67fb19bbf5967acf5150d 154 SMART SM01001 1 146 3.6E-91 T 13-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 BEN78_01935 0050e59208b67fb19bbf5967acf5150d 154 Gene3D G3DSA:3.40.50.7700 1 154 5.2E-68 T 13-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 BEN78_01935 0050e59208b67fb19bbf5967acf5150d 154 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 1 150 29.261 T 13-10-2018 IPR033747 Class I PurE BEN78_02855 2e6802c947953d408b63b607c406a361 69 Pfam PF06796 Periplasmic nitrate reductase protein NapE 22 69 4.4E-24 T 13-10-2018 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE BEN78_02855 2e6802c947953d408b63b607c406a361 69 TIGRFAM TIGR02973 nitrate_rd_NapE: periplasmic nitrate reductase, NapE protein 27 68 9.4E-21 T 13-10-2018 IPR004448 Nitrate reductas, NapE, periplasmic BEN78_04795 0018734aca1ac726045a79e51dc34a34 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 13-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_04795 0018734aca1ac726045a79e51dc34a34 71 Gene3D G3DSA:1.20.5.1150 16 54 1.7E-20 T 13-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_04795 0018734aca1ac726045a79e51dc34a34 71 Pfam PF01165 Ribosomal protein S21 3 56 5.0E-22 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_04795 0018734aca1ac726045a79e51dc34a34 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 22.274 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_04795 0018734aca1ac726045a79e51dc34a34 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 44 1.0E-9 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_04795 0018734aca1ac726045a79e51dc34a34 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 4.1E-16 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_04795 0018734aca1ac726045a79e51dc34a34 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 4.1E-16 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_04795 0018734aca1ac726045a79e51dc34a34 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 4.1E-16 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_04795 0018734aca1ac726045a79e51dc34a34 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 4.1E-16 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_04795 0018734aca1ac726045a79e51dc34a34 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 4.0E-24 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_00925 7d2e948dbca5cdc89a5f71ec6558d0f3 834 SUPERFAMILY SSF141868 586 832 8.63E-84 T 13-10-2018 IPR035919 EAL domain superfamily BEN78_00925 7d2e948dbca5cdc89a5f71ec6558d0f3 834 Gene3D G3DSA:2.10.70.100 238 281 5.5E-11 T 13-10-2018 BEN78_00925 7d2e948dbca5cdc89a5f71ec6558d0f3 834 Pfam PF00563 EAL domain 586 820 1.6E-65 T 13-10-2018 IPR001633 EAL domain BEN78_00925 7d2e948dbca5cdc89a5f71ec6558d0f3 834 SMART SM00086 241 281 2.2E-4 T 13-10-2018 IPR001610 PAC motif BEN78_00925 7d2e948dbca5cdc89a5f71ec6558d0f3 834 SMART SM00086 364 404 180.0 T 13-10-2018 IPR001610 PAC motif BEN78_00925 7d2e948dbca5cdc89a5f71ec6558d0f3 834 Gene3D G3DSA:3.30.450.20 164 233 3.9E-13 T 13-10-2018 BEN78_00925 7d2e948dbca5cdc89a5f71ec6558d0f3 834 SUPERFAMILY SSF55785 176 283 6.63E-15 T 13-10-2018 IPR035965 PAS domain superfamily BEN78_00925 7d2e948dbca5cdc89a5f71ec6558d0f3 834 Gene3D G3DSA:3.30.70.270 409 573 1.2E-15 T 13-10-2018 BEN78_00925 7d2e948dbca5cdc89a5f71ec6558d0f3 834 SUPERFAMILY SSF55073 421 563 1.02E-11 T 13-10-2018 IPR029787 Nucleotide cyclase BEN78_00925 7d2e948dbca5cdc89a5f71ec6558d0f3 834 Gene3D G3DSA:3.30.450.20 282 401 5.3E-16 T 13-10-2018 BEN78_00925 7d2e948dbca5cdc89a5f71ec6558d0f3 834 SMART SM00091 167 235 18.0 T 13-10-2018 IPR000014 PAS domain BEN78_00925 7d2e948dbca5cdc89a5f71ec6558d0f3 834 SMART SM00091 293 360 1.2E-7 T 13-10-2018 IPR000014 PAS domain BEN78_00925 7d2e948dbca5cdc89a5f71ec6558d0f3 834 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 292 411 1.1E-13 T 13-10-2018 IPR000014 PAS domain BEN78_00925 7d2e948dbca5cdc89a5f71ec6558d0f3 834 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 217 286 9.0E-11 T 13-10-2018 IPR000014 PAS domain BEN78_00925 7d2e948dbca5cdc89a5f71ec6558d0f3 834 Pfam PF00990 Diguanylate cyclase, GGDEF domain 415 563 2.2E-7 T 13-10-2018 IPR000160 GGDEF domain BEN78_00925 7d2e948dbca5cdc89a5f71ec6558d0f3 834 SMART SM00267 404 570 3.8E-7 T 13-10-2018 IPR000160 GGDEF domain BEN78_00925 7d2e948dbca5cdc89a5f71ec6558d0f3 834 SMART SM00052 580 825 3.0E-104 T 13-10-2018 IPR001633 EAL domain BEN78_00925 7d2e948dbca5cdc89a5f71ec6558d0f3 834 Pfam PF08447 PAS fold 190 274 6.5E-12 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 BEN78_00925 7d2e948dbca5cdc89a5f71ec6558d0f3 834 Gene3D G3DSA:3.30.450.20 29 115 1.7E-7 T 13-10-2018 BEN78_00925 7d2e948dbca5cdc89a5f71ec6558d0f3 834 Pfam PF13426 PAS domain 316 401 2.0E-9 T 13-10-2018 IPR000014 PAS domain BEN78_00925 7d2e948dbca5cdc89a5f71ec6558d0f3 834 Gene3D G3DSA:3.20.20.450 581 834 2.4E-92 T 13-10-2018 IPR035919 EAL domain superfamily BEN78_00925 7d2e948dbca5cdc89a5f71ec6558d0f3 834 SUPERFAMILY SSF55785 278 401 4.47E-17 T 13-10-2018 IPR035965 PAS domain superfamily BEN78_16715 f89a511d2c9e9f9034d2582f58304fe1 431 PRINTS PR00145 Argininosuccinate lyase family signature 104 126 5.6E-30 T 13-10-2018 BEN78_16715 f89a511d2c9e9f9034d2582f58304fe1 431 PRINTS PR00145 Argininosuccinate lyase family signature 279 295 5.6E-30 T 13-10-2018 BEN78_16715 f89a511d2c9e9f9034d2582f58304fe1 431 PRINTS PR00145 Argininosuccinate lyase family signature 145 165 5.6E-30 T 13-10-2018 BEN78_16715 f89a511d2c9e9f9034d2582f58304fe1 431 PRINTS PR00145 Argininosuccinate lyase family signature 313 332 5.6E-30 T 13-10-2018 BEN78_16715 f89a511d2c9e9f9034d2582f58304fe1 431 PRINTS PR00145 Argininosuccinate lyase family signature 196 212 5.6E-30 T 13-10-2018 BEN78_16715 f89a511d2c9e9f9034d2582f58304fe1 431 Gene3D G3DSA:1.20.200.10 122 362 1.8E-99 T 13-10-2018 BEN78_16715 f89a511d2c9e9f9034d2582f58304fe1 431 ProSitePatterns PS00163 Fumarate lyases signature. 279 288 - T 13-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 BEN78_16715 f89a511d2c9e9f9034d2582f58304fe1 431 Gene3D G3DSA:1.10.40.30 363 396 1.8E-99 T 13-10-2018 BEN78_16715 f89a511d2c9e9f9034d2582f58304fe1 431 Hamap MF_00006 Argininosuccinate lyase [argH]. 4 429 29.591 T 13-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BEN78_16715 f89a511d2c9e9f9034d2582f58304fe1 431 PRINTS PR00149 Fumarate lyase superfamily signature 279 295 6.9E-13 T 13-10-2018 IPR000362 Fumarate lyase family BEN78_16715 f89a511d2c9e9f9034d2582f58304fe1 431 PRINTS PR00149 Fumarate lyase superfamily signature 150 168 6.9E-13 T 13-10-2018 IPR000362 Fumarate lyase family BEN78_16715 f89a511d2c9e9f9034d2582f58304fe1 431 PRINTS PR00149 Fumarate lyase superfamily signature 105 123 6.9E-13 T 13-10-2018 IPR000362 Fumarate lyase family BEN78_16715 f89a511d2c9e9f9034d2582f58304fe1 431 Gene3D G3DSA:1.10.275.10 34 232 1.8E-99 T 13-10-2018 IPR024083 Fumarase/histidase, N-terminal BEN78_16715 f89a511d2c9e9f9034d2582f58304fe1 431 SUPERFAMILY SSF48557 25 402 3.46E-84 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 BEN78_16715 f89a511d2c9e9f9034d2582f58304fe1 431 Pfam PF00206 Lyase 35 302 1.8E-44 T 13-10-2018 IPR022761 Fumarate lyase, N-terminal BEN78_06950 8d47ad002592abe7f877b9b285bb0b6f 526 Pfam PF02225 PA domain 104 185 5.9E-8 T 13-10-2018 IPR003137 PA domain BEN78_06950 8d47ad002592abe7f877b9b285bb0b6f 526 SUPERFAMILY SSF53187 3 499 3.95E-61 T 13-10-2018 BEN78_06950 8d47ad002592abe7f877b9b285bb0b6f 526 SUPERFAMILY SSF52025 102 185 1.96E-7 T 13-10-2018 BEN78_06950 8d47ad002592abe7f877b9b285bb0b6f 526 Pfam PF04389 Peptidase family M28 271 476 9.0E-44 T 13-10-2018 IPR007484 Peptidase M28 BEN78_02355 6cf8f269890a7c6e894b587b7becfc89 335 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 313 7.4E-82 T 13-10-2018 IPR007296 Domain of unknown function DUF403 BEN78_10815 67c7c67f4af0855c022dfd01c5ba1eb6 577 Gene3D G3DSA:3.50.30.10 7 234 2.7E-56 T 13-10-2018 BEN78_10815 67c7c67f4af0855c022dfd01c5ba1eb6 577 Gene3D G3DSA:3.20.20.60 235 574 5.6E-105 T 13-10-2018 BEN78_10815 67c7c67f4af0855c022dfd01c5ba1eb6 577 SUPERFAMILY SSF52009 116 232 3.01E-25 T 13-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 BEN78_10815 67c7c67f4af0855c022dfd01c5ba1eb6 577 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 449 467 - T 13-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 BEN78_10815 67c7c67f4af0855c022dfd01c5ba1eb6 577 SUPERFAMILY SSF51621 250 548 2.28E-91 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BEN78_10815 67c7c67f4af0855c022dfd01c5ba1eb6 577 PIRSF PIRSF000732 1 575 2.7E-184 T 13-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 BEN78_10815 67c7c67f4af0855c022dfd01c5ba1eb6 577 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 5 563 7.3E-139 T 13-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 BEN78_10815 67c7c67f4af0855c022dfd01c5ba1eb6 577 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 294 313 3.4E-23 T 13-10-2018 BEN78_10815 67c7c67f4af0855c022dfd01c5ba1eb6 577 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 449 464 3.4E-23 T 13-10-2018 BEN78_10815 67c7c67f4af0855c022dfd01c5ba1eb6 577 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 502 514 3.4E-23 T 13-10-2018 BEN78_10815 67c7c67f4af0855c022dfd01c5ba1eb6 577 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 466 481 3.4E-23 T 13-10-2018 BEN78_10815 67c7c67f4af0855c022dfd01c5ba1eb6 577 Gene3D G3DSA:1.10.274.10 24 148 2.7E-56 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 BEN78_10815 67c7c67f4af0855c022dfd01c5ba1eb6 577 Pfam PF00391 PEP-utilising enzyme, mobile domain 155 226 6.1E-17 T 13-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 BEN78_10815 67c7c67f4af0855c022dfd01c5ba1eb6 577 SUPERFAMILY SSF47831 27 145 8.37E-26 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 BEN78_10815 67c7c67f4af0855c022dfd01c5ba1eb6 577 Pfam PF05524 PEP-utilising enzyme, N-terminal 6 129 2.0E-23 T 13-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 BEN78_10815 67c7c67f4af0855c022dfd01c5ba1eb6 577 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 252 542 1.6E-91 T 13-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 BEN78_14790 462848d20ef28e92ae95ec9e784c9bf0 131 SMART SM00530 9 65 2.0E-6 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN78_14790 462848d20ef28e92ae95ec9e784c9bf0 131 Gene3D G3DSA:1.10.260.40 3 68 5.4E-9 T 13-10-2018 BEN78_14790 462848d20ef28e92ae95ec9e784c9bf0 131 SUPERFAMILY SSF47413 4 63 2.16E-9 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN78_14790 462848d20ef28e92ae95ec9e784c9bf0 131 Pfam PF13560 Helix-turn-helix domain 6 64 3.3E-11 T 13-10-2018 BEN78_13400 0232c7b19c2da69cf8ed9e4d497f4385 303 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN78_13400 0232c7b19c2da69cf8ed9e4d497f4385 303 Gene3D G3DSA:3.40.50.300 1 231 2.0E-61 T 13-10-2018 BEN78_13400 0232c7b19c2da69cf8ed9e4d497f4385 303 Pfam PF00005 ABC transporter 18 158 3.9E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_13400 0232c7b19c2da69cf8ed9e4d497f4385 303 SUPERFAMILY SSF52540 1 218 3.02E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_13400 0232c7b19c2da69cf8ed9e4d497f4385 303 SMART SM00382 26 206 2.1E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_11445 ff8570fffb78ec4cf7b8d1ed99ef5554 407 Gene3D G3DSA:3.20.20.140 70 366 1.2E-147 T 13-10-2018 BEN78_11445 ff8570fffb78ec4cf7b8d1ed99ef5554 407 SUPERFAMILY SSF51338 7 404 1.58E-19 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BEN78_11445 ff8570fffb78ec4cf7b8d1ed99ef5554 407 SUPERFAMILY SSF51556 69 365 2.1E-84 T 13-10-2018 IPR032466 Metal-dependent hydrolase BEN78_11445 ff8570fffb78ec4cf7b8d1ed99ef5554 407 Hamap MF_00372 Imidazolonepropionase [hutI]. 8 406 40.356 T 13-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BEN78_11445 ff8570fffb78ec4cf7b8d1ed99ef5554 407 TIGRFAM TIGR01224 hutI: imidazolonepropionase 28 403 1.4E-132 T 13-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BEN78_11445 ff8570fffb78ec4cf7b8d1ed99ef5554 407 Gene3D G3DSA:2.30.40.10 16 399 1.2E-147 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BEN78_11445 ff8570fffb78ec4cf7b8d1ed99ef5554 407 Pfam PF01979 Amidohydrolase family 67 384 3.7E-19 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BEN78_10185 4e374408b27c63f0ad2dc10a0828760c 221 Gene3D G3DSA:3.90.1720.10 69 211 4.3E-9 T 13-10-2018 BEN78_10185 4e374408b27c63f0ad2dc10a0828760c 221 SMART SM00257 9 54 1.2E-12 T 13-10-2018 IPR018392 LysM domain BEN78_10185 4e374408b27c63f0ad2dc10a0828760c 221 Pfam PF01476 LysM domain 14 54 3.0E-13 T 13-10-2018 IPR018392 LysM domain BEN78_10185 4e374408b27c63f0ad2dc10a0828760c 221 Pfam PF00877 NlpC/P60 family 114 194 1.7E-4 T 13-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain BEN78_10185 4e374408b27c63f0ad2dc10a0828760c 221 SUPERFAMILY SSF54001 112 196 1.6E-6 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BEN78_10185 4e374408b27c63f0ad2dc10a0828760c 221 Gene3D G3DSA:3.10.350.10 2 64 4.6E-16 T 13-10-2018 IPR036779 LysM domain superfamily BEN78_10185 4e374408b27c63f0ad2dc10a0828760c 221 SUPERFAMILY SSF54106 9 54 3.27E-9 T 13-10-2018 BEN78_00270 a48a1e26d96581327edee27173d8ca58 473 PIRSF PIRSF006060 13 469 3.2E-83 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BEN78_00270 a48a1e26d96581327edee27173d8ca58 473 Pfam PF13520 Amino acid permease 26 435 3.7E-53 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BEN78_00270 a48a1e26d96581327edee27173d8ca58 473 Gene3D G3DSA:1.20.1740.10 24 468 2.7E-110 T 13-10-2018 BEN78_00615 3129a9f9e2d578aa4847e3f82880a71b 300 Pfam PF00795 Carbon-nitrogen hydrolase 10 277 6.2E-54 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 BEN78_00615 3129a9f9e2d578aa4847e3f82880a71b 300 Gene3D G3DSA:3.60.110.10 2 298 1.8E-94 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily BEN78_00615 3129a9f9e2d578aa4847e3f82880a71b 300 SUPERFAMILY SSF56317 6 297 3.53E-86 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily BEN78_01365 77125438a0b438580302065470aa063c 430 SUPERFAMILY SSF103473 6 420 1.02E-74 T 13-10-2018 IPR036259 MFS transporter superfamily BEN78_01365 77125438a0b438580302065470aa063c 430 Gene3D G3DSA:1.20.1250.20 224 422 7.7E-26 T 13-10-2018 BEN78_01365 77125438a0b438580302065470aa063c 430 Pfam PF07690 Major Facilitator Superfamily 19 382 3.1E-52 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN78_01365 77125438a0b438580302065470aa063c 430 Gene3D G3DSA:1.20.1250.20 5 202 6.0E-43 T 13-10-2018 BEN78_14990 8ec53cda0a62ec926fc72a6b46710b9f 468 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 41 51 - T 13-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 BEN78_14990 8ec53cda0a62ec926fc72a6b46710b9f 468 Gene3D G3DSA:3.50.50.60 9 335 1.0E-110 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_14990 8ec53cda0a62ec926fc72a6b46710b9f 468 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 330 2.4E-70 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BEN78_14990 8ec53cda0a62ec926fc72a6b46710b9f 468 Gene3D G3DSA:3.30.390.30 348 468 4.7E-42 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BEN78_14990 8ec53cda0a62ec926fc72a6b46710b9f 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 3.3E-37 T 13-10-2018 BEN78_14990 8ec53cda0a62ec926fc72a6b46710b9f 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 182 200 3.3E-37 T 13-10-2018 BEN78_14990 8ec53cda0a62ec926fc72a6b46710b9f 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 295 317 3.3E-37 T 13-10-2018 BEN78_14990 8ec53cda0a62ec926fc72a6b46710b9f 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 267 283 3.3E-37 T 13-10-2018 BEN78_14990 8ec53cda0a62ec926fc72a6b46710b9f 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 3.3E-37 T 13-10-2018 BEN78_14990 8ec53cda0a62ec926fc72a6b46710b9f 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.1E-66 T 13-10-2018 BEN78_14990 8ec53cda0a62ec926fc72a6b46710b9f 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 410 425 1.1E-66 T 13-10-2018 BEN78_14990 8ec53cda0a62ec926fc72a6b46710b9f 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 156 1.1E-66 T 13-10-2018 BEN78_14990 8ec53cda0a62ec926fc72a6b46710b9f 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 1.1E-66 T 13-10-2018 BEN78_14990 8ec53cda0a62ec926fc72a6b46710b9f 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 268 282 1.1E-66 T 13-10-2018 BEN78_14990 8ec53cda0a62ec926fc72a6b46710b9f 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 1.1E-66 T 13-10-2018 BEN78_14990 8ec53cda0a62ec926fc72a6b46710b9f 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 1.1E-66 T 13-10-2018 BEN78_14990 8ec53cda0a62ec926fc72a6b46710b9f 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 182 207 1.1E-66 T 13-10-2018 BEN78_14990 8ec53cda0a62ec926fc72a6b46710b9f 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 345 366 1.1E-66 T 13-10-2018 BEN78_14990 8ec53cda0a62ec926fc72a6b46710b9f 468 PIRSF PIRSF000350 1 462 4.5E-86 T 13-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 BEN78_14990 8ec53cda0a62ec926fc72a6b46710b9f 468 SUPERFAMILY SSF55424 348 467 3.44E-35 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BEN78_14990 8ec53cda0a62ec926fc72a6b46710b9f 468 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 349 458 1.4E-31 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 BEN78_14990 8ec53cda0a62ec926fc72a6b46710b9f 468 SUPERFAMILY SSF51905 2 339 9.07E-55 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_14990 8ec53cda0a62ec926fc72a6b46710b9f 468 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 8 468 1.8E-147 T 13-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 BEN78_14990 8ec53cda0a62ec926fc72a6b46710b9f 468 Gene3D G3DSA:3.50.50.60 156 274 1.0E-110 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_08655 abbccbcfe7ceeaa6b6f8d0c2d6b90256 118 Gene3D G3DSA:2.150.10.10 1 42 4.2E-13 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_08655 abbccbcfe7ceeaa6b6f8d0c2d6b90256 118 Pfam PF03895 YadA-like membrane anchor domain 58 118 2.0E-21 T 13-10-2018 IPR005594 YadA-like, C-terminal BEN78_08655 abbccbcfe7ceeaa6b6f8d0c2d6b90256 118 Gene3D G3DSA:3.30.1300.30 43 118 2.6E-32 T 13-10-2018 BEN78_08655 abbccbcfe7ceeaa6b6f8d0c2d6b90256 118 SUPERFAMILY SSF54523 22 118 1.88E-26 T 13-10-2018 BEN78_08655 abbccbcfe7ceeaa6b6f8d0c2d6b90256 118 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 11 48 8.2E-10 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_14560 003ed7162d6f8f40d4aaa52a7ed2e13c 210 SUPERFAMILY SSF52172 2 131 2.7E-30 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_14560 003ed7162d6f8f40d4aaa52a7ed2e13c 210 SMART SM00421 145 202 1.7E-18 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_14560 003ed7162d6f8f40d4aaa52a7ed2e13c 210 SUPERFAMILY SSF46894 134 205 3.06E-17 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BEN78_14560 003ed7162d6f8f40d4aaa52a7ed2e13c 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 202 6.2E-15 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_14560 003ed7162d6f8f40d4aaa52a7ed2e13c 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 2.1E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_14560 003ed7162d6f8f40d4aaa52a7ed2e13c 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 2.1E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_14560 003ed7162d6f8f40d4aaa52a7ed2e13c 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 2.1E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_14560 003ed7162d6f8f40d4aaa52a7ed2e13c 210 Pfam PF00072 Response regulator receiver domain 3 114 5.1E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_14560 003ed7162d6f8f40d4aaa52a7ed2e13c 210 SMART SM00448 1 114 3.1E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_14560 003ed7162d6f8f40d4aaa52a7ed2e13c 210 Gene3D G3DSA:3.40.50.12740 1 206 1.5E-56 T 13-10-2018 BEN78_12465 e080116186b3fa6595143aaf474dd5a6 359 SUPERFAMILY SSF51412 15 357 2.59E-52 T 13-10-2018 BEN78_12465 e080116186b3fa6595143aaf474dd5a6 359 Gene3D G3DSA:3.20.20.70 13 358 8.4E-94 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_12465 e080116186b3fa6595143aaf474dd5a6 359 Pfam PF03060 Nitronate monooxygenase 21 349 8.0E-65 T 13-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 BEN78_13945 3d569f34cd21407540d984b6486f9b63 298 Gene3D G3DSA:3.40.190.10 92 292 2.3E-56 T 13-10-2018 BEN78_13945 3d569f34cd21407540d984b6486f9b63 298 Gene3D G3DSA:1.10.10.10 1 89 9.1E-29 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_13945 3d569f34cd21407540d984b6486f9b63 298 Gene3D G3DSA:3.40.190.10 173 269 2.3E-56 T 13-10-2018 BEN78_13945 3d569f34cd21407540d984b6486f9b63 298 Pfam PF03466 LysR substrate binding domain 97 295 9.0E-28 T 13-10-2018 IPR005119 LysR, substrate-binding BEN78_13945 3d569f34cd21407540d984b6486f9b63 298 SUPERFAMILY SSF53850 94 295 6.7E-39 T 13-10-2018 BEN78_13945 3d569f34cd21407540d984b6486f9b63 298 SUPERFAMILY SSF46785 8 86 8.16E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_13945 3d569f34cd21407540d984b6486f9b63 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 4.0E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_03830 4372829b5bad02130b2f1da1c59108f2 786 Pfam PF00072 Response regulator receiver domain 509 622 5.6E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_03830 4372829b5bad02130b2f1da1c59108f2 786 SUPERFAMILY SSF47226 663 778 2.49E-24 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 BEN78_03830 4372829b5bad02130b2f1da1c59108f2 786 SUPERFAMILY SSF55874 159 331 5.24E-48 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_03830 4372829b5bad02130b2f1da1c59108f2 786 Gene3D G3DSA:3.30.565.10 171 335 1.2E-54 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_03830 4372829b5bad02130b2f1da1c59108f2 786 SUPERFAMILY SSF52172 507 629 8.11E-37 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_03830 4372829b5bad02130b2f1da1c59108f2 786 Gene3D G3DSA:3.40.50.2300 503 628 1.4E-42 T 13-10-2018 BEN78_03830 4372829b5bad02130b2f1da1c59108f2 786 Pfam PF01627 Hpt domain 695 776 4.3E-10 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BEN78_03830 4372829b5bad02130b2f1da1c59108f2 786 SMART SM00448 507 624 6.9E-36 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_03830 4372829b5bad02130b2f1da1c59108f2 786 Gene3D G3DSA:1.20.120.160 672 780 1.2E-24 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 BEN78_03830 4372829b5bad02130b2f1da1c59108f2 786 Pfam PF00512 His Kinase A (phospho-acceptor) domain 105 169 1.3E-15 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_03830 4372829b5bad02130b2f1da1c59108f2 786 SUPERFAMILY SSF47384 88 171 6.28E-20 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN78_03830 4372829b5bad02130b2f1da1c59108f2 786 SMART SM00388 105 170 1.5E-18 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_03830 4372829b5bad02130b2f1da1c59108f2 786 SMART SM00387 217 333 1.6E-42 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_03830 4372829b5bad02130b2f1da1c59108f2 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 317 330 7.1E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_03830 4372829b5bad02130b2f1da1c59108f2 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 293 311 7.1E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_03830 4372829b5bad02130b2f1da1c59108f2 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 276 286 7.1E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_03830 4372829b5bad02130b2f1da1c59108f2 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 258 272 7.1E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_03830 4372829b5bad02130b2f1da1c59108f2 786 SMART SM00073 684 782 2.2E-4 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BEN78_03830 4372829b5bad02130b2f1da1c59108f2 786 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 217 332 9.4E-33 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_03830 4372829b5bad02130b2f1da1c59108f2 786 Gene3D G3DSA:1.10.287.130 69 168 5.3E-23 T 13-10-2018 BEN78_04155 065f5e88d984cb84175f1fd2a00bbc2a 214 Pfam PF03922 OmpW family 56 214 6.4E-36 T 13-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 BEN78_04155 065f5e88d984cb84175f1fd2a00bbc2a 214 SUPERFAMILY SSF56925 44 214 4.97E-20 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BEN78_04155 065f5e88d984cb84175f1fd2a00bbc2a 214 Gene3D G3DSA:2.40.160.20 36 214 6.8E-38 T 13-10-2018 BEN78_05515 9be7ba741602c05ab114b63881490dd4 419 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 17 108 3.0E-10 T 13-10-2018 IPR032030 YscD, cytoplasmic domain BEN78_05515 9be7ba741602c05ab114b63881490dd4 419 Gene3D G3DSA:2.60.200.20 12 117 3.4E-13 T 13-10-2018 BEN78_05515 9be7ba741602c05ab114b63881490dd4 419 SUPERFAMILY SSF49879 8 106 1.33E-11 T 13-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 BEN78_05515 9be7ba741602c05ab114b63881490dd4 419 ProDom PD128471 PLASMID Y4YQ BLL1803 TRANSMEMBRANE MLR6347 MEMBRANE ID195 16 111 0.005 T 13-10-2018 BEN78_15785 948cf5b212195a44af017ace8afd1da2 466 Gene3D G3DSA:1.10.860.10 15 182 2.3E-54 T 13-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal BEN78_15785 948cf5b212195a44af017ace8afd1da2 466 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 23 458 2.8E-177 T 13-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 BEN78_15785 948cf5b212195a44af017ace8afd1da2 466 Pfam PF03796 DnaB-like helicase C terminal domain 201 456 1.4E-115 T 13-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 BEN78_15785 948cf5b212195a44af017ace8afd1da2 466 SUPERFAMILY SSF48024 21 132 3.53E-36 T 13-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 BEN78_15785 948cf5b212195a44af017ace8afd1da2 466 Pfam PF00772 DnaB-like helicase N terminal domain 23 124 5.7E-34 T 13-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 BEN78_15785 948cf5b212195a44af017ace8afd1da2 466 Gene3D G3DSA:3.40.50.300 184 462 7.3E-109 T 13-10-2018 BEN78_15785 948cf5b212195a44af017ace8afd1da2 466 SUPERFAMILY SSF52540 199 449 3.87E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_10135 42a62ac88f3b3660caf45073ac47e34b 107 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 1 105 6.9E-41 T 13-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 BEN78_10135 42a62ac88f3b3660caf45073ac47e34b 107 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 1 105 25.188 T 13-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 BEN78_10135 42a62ac88f3b3660caf45073ac47e34b 107 SUPERFAMILY SSF103481 7 105 1.83E-5 T 13-10-2018 BEN78_11630 bd5449b740684ac53061e90ab8b341c5 106 PIRSF PIRSF005894 1 105 5.8E-44 T 13-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 BEN78_11630 bd5449b740684ac53061e90ab8b341c5 106 Pfam PF00462 Glutaredoxin 16 81 1.4E-16 T 13-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 BEN78_11630 bd5449b740684ac53061e90ab8b341c5 106 SUPERFAMILY SSF52833 2 102 3.84E-31 T 13-10-2018 IPR036249 Thioredoxin-like superfamily BEN78_11630 bd5449b740684ac53061e90ab8b341c5 106 Gene3D G3DSA:3.40.30.10 6 102 8.9E-30 T 13-10-2018 BEN78_11630 bd5449b740684ac53061e90ab8b341c5 106 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 101 5.1E-40 T 13-10-2018 IPR004480 Monothiol glutaredoxin-related BEN78_13730 e48bce42ce423bd0b2b21914828e8d10 617 Pfam PF07664 Ferrous iron transport protein B C terminus 396 448 7.6E-13 T 13-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 BEN78_13730 e48bce42ce423bd0b2b21914828e8d10 617 SUPERFAMILY SSF52540 6 173 1.44E-34 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_13730 e48bce42ce423bd0b2b21914828e8d10 617 Gene3D G3DSA:3.40.50.300 5 205 6.8E-42 T 13-10-2018 BEN78_13730 e48bce42ce423bd0b2b21914828e8d10 617 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 30 48 3.5E-6 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 BEN78_13730 e48bce42ce423bd0b2b21914828e8d10 617 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 9 29 3.5E-6 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 BEN78_13730 e48bce42ce423bd0b2b21914828e8d10 617 Pfam PF02421 Ferrous iron transport protein B 9 166 1.6E-49 T 13-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 BEN78_13730 e48bce42ce423bd0b2b21914828e8d10 617 Pfam PF07670 Nucleoside recognition 453 586 1.5E-22 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 BEN78_13730 e48bce42ce423bd0b2b21914828e8d10 617 Pfam PF07670 Nucleoside recognition 284 378 8.5E-13 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 BEN78_15405 e10872eeb0ea97dc44cd5376720eef3b 222 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 8 211 2.4E-73 T 13-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 BEN78_15405 e10872eeb0ea97dc44cd5376720eef3b 222 Gene3D G3DSA:3.40.50.1000 8 191 4.3E-53 T 13-10-2018 IPR023214 HAD superfamily BEN78_15405 e10872eeb0ea97dc44cd5376720eef3b 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 185 3.5E-31 T 13-10-2018 BEN78_15405 e10872eeb0ea97dc44cd5376720eef3b 222 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 98 180 8.1E-10 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BEN78_15405 e10872eeb0ea97dc44cd5376720eef3b 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 81 185 2.1E-8 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BEN78_15405 e10872eeb0ea97dc44cd5376720eef3b 222 Gene3D G3DSA:1.10.150.240 19 85 4.3E-53 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BEN78_15405 e10872eeb0ea97dc44cd5376720eef3b 222 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 4 217 32.382 T 13-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 BEN78_15405 e10872eeb0ea97dc44cd5376720eef3b 222 SUPERFAMILY SSF56784 7 213 7.75E-53 T 13-10-2018 IPR036412 HAD-like superfamily BEN78_02255 3e8f0c2949ee818a6bb2f091b74d0d71 339 Gene3D G3DSA:3.40.190.10 121 333 1.3E-112 T 13-10-2018 BEN78_02255 3e8f0c2949ee818a6bb2f091b74d0d71 339 SUPERFAMILY SSF53850 28 333 7.61E-71 T 13-10-2018 BEN78_02255 3e8f0c2949ee818a6bb2f091b74d0d71 339 Gene3D G3DSA:3.40.190.10 34 303 1.3E-112 T 13-10-2018 BEN78_02255 3e8f0c2949ee818a6bb2f091b74d0d71 339 Pfam PF13531 Bacterial extracellular solute-binding protein 48 287 2.4E-39 T 13-10-2018 BEN78_02255 3e8f0c2949ee818a6bb2f091b74d0d71 339 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 25 334 3.1E-109 T 13-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 BEN78_14335 b37e409c4f919ed5334441492d4dbae1 863 Pfam PF11791 Aconitate B N-terminal domain 4 156 2.3E-63 T 13-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 BEN78_14335 b37e409c4f919ed5334441492d4dbae1 863 Pfam PF00330 Aconitase family (aconitate hydratase) 475 817 3.0E-38 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN78_14335 b37e409c4f919ed5334441492d4dbae1 863 Gene3D G3DSA:3.30.499.10 405 532 6.8E-150 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 BEN78_14335 b37e409c4f919ed5334441492d4dbae1 863 ProSitePatterns PS00450 Aconitase family signature 1. 705 722 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 BEN78_14335 b37e409c4f919ed5334441492d4dbae1 863 Gene3D G3DSA:3.40.1060.10 385 684 6.8E-150 T 13-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 BEN78_14335 b37e409c4f919ed5334441492d4dbae1 863 Gene3D G3DSA:3.20.19.10 162 361 5.5E-67 T 13-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 BEN78_14335 b37e409c4f919ed5334441492d4dbae1 863 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 1.1E-94 T 13-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 BEN78_14335 b37e409c4f919ed5334441492d4dbae1 863 SUPERFAMILY SSF52016 162 372 7.06E-64 T 13-10-2018 BEN78_14335 b37e409c4f919ed5334441492d4dbae1 863 Gene3D G3DSA:3.30.499.10 686 863 1.1E-63 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 BEN78_14335 b37e409c4f919ed5334441492d4dbae1 863 PIRSF PIRSF036687 1 861 0.0 T 13-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 BEN78_14335 b37e409c4f919ed5334441492d4dbae1 863 SUPERFAMILY SSF53732 379 857 3.01E-144 T 13-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 BEN78_14335 b37e409c4f919ed5334441492d4dbae1 863 Gene3D G3DSA:1.25.40.310 1 161 2.3E-67 T 13-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 BEN78_14335 b37e409c4f919ed5334441492d4dbae1 863 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 856 0.0 T 13-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 BEN78_14335 b37e409c4f919ed5334441492d4dbae1 863 SUPERFAMILY SSF74778 1 160 3.79E-66 T 13-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 BEN78_03095 2027638c81d1a1e6a4312070f3d23480 212 Pfam PF02502 Ribose/Galactose Isomerase 3 138 6.9E-28 T 13-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 BEN78_03095 2027638c81d1a1e6a4312070f3d23480 212 Gene3D G3DSA:3.40.1400.10 1 211 2.0E-91 T 13-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 BEN78_03095 2027638c81d1a1e6a4312070f3d23480 212 Pfam PF12408 Ribose-5-phosphate isomerase 165 209 1.0E-19 T 13-10-2018 IPR022133 Ribose-5-phosphate isomerase, C-terminal BEN78_03095 2027638c81d1a1e6a4312070f3d23480 212 SUPERFAMILY SSF89623 1 161 1.2E-37 T 13-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 BEN78_03170 5d6b3ea53c823751a0f0992ed34f6a25 341 SUPERFAMILY SSF53613 2 331 1.38E-66 T 13-10-2018 IPR029056 Ribokinase-like BEN78_03170 5d6b3ea53c823751a0f0992ed34f6a25 341 Pfam PF00294 pfkB family carbohydrate kinase 3 316 7.2E-35 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB BEN78_03170 5d6b3ea53c823751a0f0992ed34f6a25 341 Gene3D G3DSA:3.40.1190.20 1 339 2.9E-102 T 13-10-2018 IPR029056 Ribokinase-like BEN78_04065 fe0a7bf7f7301024eeb8c0c1f43ba7dc 140 Gene3D G3DSA:2.60.15.10 1 139 2.0E-36 T 13-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_04065 fe0a7bf7f7301024eeb8c0c1f43ba7dc 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 87 131 3.2E-9 T 13-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain BEN78_04065 fe0a7bf7f7301024eeb8c0c1f43ba7dc 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 132 8.4E-41 T 13-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_04065 fe0a7bf7f7301024eeb8c0c1f43ba7dc 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 130 19.231 T 13-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_04065 fe0a7bf7f7301024eeb8c0c1f43ba7dc 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 5 83 3.6E-26 T 13-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_04065 fe0a7bf7f7301024eeb8c0c1f43ba7dc 140 SUPERFAMILY SSF51344 3 85 3.79E-22 T 13-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_04065 fe0a7bf7f7301024eeb8c0c1f43ba7dc 140 SUPERFAMILY SSF46604 87 136 3.4E-10 T 13-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_04065 fe0a7bf7f7301024eeb8c0c1f43ba7dc 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 85 2.0E-32 T 13-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_09845 d1f7632c53b56c7c3c90a93c3f03dc10 487 Gene3D G3DSA:3.90.1300.10 4 484 4.5E-136 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 BEN78_09845 d1f7632c53b56c7c3c90a93c3f03dc10 487 SUPERFAMILY SSF75304 6 471 7.33E-125 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 BEN78_09845 d1f7632c53b56c7c3c90a93c3f03dc10 487 Pfam PF01425 Amidase 31 462 2.5E-94 T 13-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 BEN78_09845 d1f7632c53b56c7c3c90a93c3f03dc10 487 ProSitePatterns PS00571 Amidases signature. 159 190 - T 13-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 BEN78_03655 a5d50e353d443e37d5d3088eba0f1385 248 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 83 237 7.9E-21 T 13-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 BEN78_03655 a5d50e353d443e37d5d3088eba0f1385 248 Gene3D G3DSA:3.30.420.490 117 231 6.7E-56 T 13-10-2018 BEN78_03655 a5d50e353d443e37d5d3088eba0f1385 248 SUPERFAMILY SSF53067 5 111 1.55E-16 T 13-10-2018 BEN78_03655 a5d50e353d443e37d5d3088eba0f1385 248 Hamap MF_01274 Type III pantothenate kinase [coaX]. 2 243 16.728 T 13-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 BEN78_03655 a5d50e353d443e37d5d3088eba0f1385 248 Gene3D G3DSA:3.30.420.40 5 236 6.7E-56 T 13-10-2018 BEN78_03655 a5d50e353d443e37d5d3088eba0f1385 248 Pfam PF03309 Type III pantothenate kinase 5 194 3.5E-37 T 13-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 BEN78_03655 a5d50e353d443e37d5d3088eba0f1385 248 SUPERFAMILY SSF53067 116 240 1.81E-25 T 13-10-2018 BEN78_01000 fb614cca084c0d54784f51b28c7cf914 209 Hamap MF_00052_B Ribonuclease HII [rnhB]. 6 186 37.118 T 13-10-2018 IPR022898 Ribonuclease HII GO:0004523 BEN78_01000 fb614cca084c0d54784f51b28c7cf914 209 SUPERFAMILY SSF53098 5 191 1.26E-65 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily BEN78_01000 fb614cca084c0d54784f51b28c7cf914 209 Gene3D G3DSA:3.30.420.10 2 201 3.9E-72 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BEN78_01000 fb614cca084c0d54784f51b28c7cf914 209 Pfam PF01351 Ribonuclease HII 8 185 2.1E-39 T 13-10-2018 IPR024567 Ribonuclease HII/HIII domain BEN78_16540 9161ddf1eb662ce892a3e502bfcd8850 500 PIRSF PIRSF006060 21 499 2.1E-93 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BEN78_16540 9161ddf1eb662ce892a3e502bfcd8850 500 Pfam PF13520 Amino acid permease 41 467 2.0E-54 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BEN78_16540 9161ddf1eb662ce892a3e502bfcd8850 500 Gene3D G3DSA:1.20.1740.10 32 499 5.2E-119 T 13-10-2018 BEN78_05110 a310b2f65f4139c3ab306901bbfafe94 370 SUPERFAMILY SSF56634 35 354 1.7E-40 T 13-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BEN78_05110 a310b2f65f4139c3ab306901bbfafe94 370 Gene3D G3DSA:2.40.180.20 56 331 3.2E-17 T 13-10-2018 BEN78_05110 a310b2f65f4139c3ab306901bbfafe94 370 Gene3D G3DSA:1.20.1280.120 45 345 3.2E-17 T 13-10-2018 BEN78_01250 11732d75992f118efe06a975cc438dfd 301 Pfam PF13796 Putative sensor 114 295 8.5E-40 T 13-10-2018 IPR025828 Putative sensor domain BEN78_01530 95254db03fed5c823c4fb62c657204f3 374 SMART SM00387 243 354 6.5E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_01530 95254db03fed5c823c4fb62c657204f3 374 SUPERFAMILY SSF158472 79 131 5.49E-6 T 13-10-2018 BEN78_01530 95254db03fed5c823c4fb62c657204f3 374 PRINTS PR00344 Bacterial sensor protein C-terminal signature 297 307 4.1E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_01530 95254db03fed5c823c4fb62c657204f3 374 PRINTS PR00344 Bacterial sensor protein C-terminal signature 338 351 4.1E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_01530 95254db03fed5c823c4fb62c657204f3 374 PRINTS PR00344 Bacterial sensor protein C-terminal signature 314 332 4.1E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_01530 95254db03fed5c823c4fb62c657204f3 374 PRINTS PR00344 Bacterial sensor protein C-terminal signature 279 293 4.1E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_01530 95254db03fed5c823c4fb62c657204f3 374 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 244 351 2.6E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_01530 95254db03fed5c823c4fb62c657204f3 374 SMART SM00304 79 133 1.9E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BEN78_01530 95254db03fed5c823c4fb62c657204f3 374 SMART SM00388 134 198 5.4E-11 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_01530 95254db03fed5c823c4fb62c657204f3 374 Pfam PF00512 His Kinase A (phospho-acceptor) domain 139 198 1.7E-8 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_01530 95254db03fed5c823c4fb62c657204f3 374 Gene3D G3DSA:3.30.565.10 205 360 6.6E-34 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_01530 95254db03fed5c823c4fb62c657204f3 374 SUPERFAMILY SSF47384 117 199 8.04E-13 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN78_01530 95254db03fed5c823c4fb62c657204f3 374 SUPERFAMILY SSF55874 188 352 8.25E-37 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_01530 95254db03fed5c823c4fb62c657204f3 374 Gene3D G3DSA:1.10.287.130 77 193 9.4E-19 T 13-10-2018 BEN78_00265 3c762f472b8239f68373560b6456eaa3 328 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 10 314 29.83 T 13-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 BEN78_00265 3c762f472b8239f68373560b6456eaa3 328 SUPERFAMILY SSF52540 11 154 1.86E-21 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_00265 3c762f472b8239f68373560b6456eaa3 328 Gene3D G3DSA:1.10.20.140 117 188 5.1E-96 T 13-10-2018 BEN78_00265 3c762f472b8239f68373560b6456eaa3 328 Gene3D G3DSA:3.40.50.300 14 301 5.1E-96 T 13-10-2018 BEN78_00265 3c762f472b8239f68373560b6456eaa3 328 Pfam PF01715 IPP transferase 44 296 3.7E-80 T 13-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 BEN78_00265 3c762f472b8239f68373560b6456eaa3 328 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 10 302 1.3E-90 T 13-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 BEN78_11160 311d1f50ad6c90aa857d1db4202838f8 175 SUPERFAMILY SSF56053 81 174 2.16E-36 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11160 311d1f50ad6c90aa857d1db4202838f8 175 PIRSF PIRSF002162 1 175 7.9E-45 T 13-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11160 311d1f50ad6c90aa857d1db4202838f8 175 Pfam PF00347 Ribosomal protein L6 12 80 1.0E-12 T 13-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11160 311d1f50ad6c90aa857d1db4202838f8 175 Pfam PF00347 Ribosomal protein L6 88 162 2.6E-19 T 13-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11160 311d1f50ad6c90aa857d1db4202838f8 175 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 174 5.2E-71 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 BEN78_11160 311d1f50ad6c90aa857d1db4202838f8 175 Gene3D G3DSA:3.90.930.12 1 80 5.0E-24 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11160 311d1f50ad6c90aa857d1db4202838f8 175 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 152 160 - T 13-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_11160 311d1f50ad6c90aa857d1db4202838f8 175 Gene3D G3DSA:3.90.930.12 81 175 3.3E-40 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11160 311d1f50ad6c90aa857d1db4202838f8 175 PRINTS PR00059 Ribosomal protein L6 signature 97 113 2.8E-34 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 BEN78_11160 311d1f50ad6c90aa857d1db4202838f8 175 PRINTS PR00059 Ribosomal protein L6 signature 69 94 2.8E-34 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 BEN78_11160 311d1f50ad6c90aa857d1db4202838f8 175 PRINTS PR00059 Ribosomal protein L6 signature 139 160 2.8E-34 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 BEN78_11160 311d1f50ad6c90aa857d1db4202838f8 175 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 174 37.095 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 BEN78_11160 311d1f50ad6c90aa857d1db4202838f8 175 SUPERFAMILY SSF56053 2 80 2.16E-19 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_10735 41cd215375d60ac7bf7fb4920c15dc01 280 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 11 275 26.419 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BEN78_10735 41cd215375d60ac7bf7fb4920c15dc01 280 Gene3D G3DSA:1.10.3730.10 173 279 2.1E-40 T 13-10-2018 BEN78_10735 41cd215375d60ac7bf7fb4920c15dc01 280 SUPERFAMILY SSF51735 14 168 3.85E-34 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_10735 41cd215375d60ac7bf7fb4920c15dc01 280 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 171 275 3.2E-35 T 13-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BEN78_10735 41cd215375d60ac7bf7fb4920c15dc01 280 SUPERFAMILY SSF48179 170 276 4.42E-34 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BEN78_10735 41cd215375d60ac7bf7fb4920c15dc01 280 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 14 275 1.6E-82 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BEN78_10735 41cd215375d60ac7bf7fb4920c15dc01 280 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 14 107 3.1E-14 T 13-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal BEN78_10735 41cd215375d60ac7bf7fb4920c15dc01 280 Gene3D G3DSA:3.40.50.720 10 172 2.7E-44 T 13-10-2018 BEN78_10735 41cd215375d60ac7bf7fb4920c15dc01 280 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 230 253 - T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BEN78_10735 41cd215375d60ac7bf7fb4920c15dc01 280 PIRSF PIRSF000193 11 278 6.7E-70 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BEN78_16590 0d8bacb847454f01df4e0d9c30a716d1 202 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 57 106 7.0E-18 T 13-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 BEN78_16590 0d8bacb847454f01df4e0d9c30a716d1 202 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 9 202 34.547 T 13-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 BEN78_16590 0d8bacb847454f01df4e0d9c30a716d1 202 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 111 197 19.717 T 13-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 BEN78_16590 0d8bacb847454f01df4e0d9c30a716d1 202 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 115 195 2.9E-13 T 13-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 BEN78_16590 0d8bacb847454f01df4e0d9c30a716d1 202 Gene3D G3DSA:1.10.287.1080 111 202 2.1E-27 T 13-10-2018 BEN78_16590 0d8bacb847454f01df4e0d9c30a716d1 202 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 114 197 3.7E-29 T 13-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 BEN78_16590 0d8bacb847454f01df4e0d9c30a716d1 202 SUPERFAMILY SSF141734 10 109 1.31E-40 T 13-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 BEN78_16590 0d8bacb847454f01df4e0d9c30a716d1 202 SUPERFAMILY SSF101386 113 200 6.11E-23 T 13-10-2018 BEN78_16590 0d8bacb847454f01df4e0d9c30a716d1 202 Gene3D G3DSA:3.10.20.400 6 98 1.2E-32 T 13-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 BEN78_16590 0d8bacb847454f01df4e0d9c30a716d1 202 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 34 106 1.8E-28 T 13-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 BEN78_14530 52a713440660099f8e80447086a56df9 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 30 56 2.9E-64 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BEN78_14530 52a713440660099f8e80447086a56df9 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 191 216 2.9E-64 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BEN78_14530 52a713440660099f8e80447086a56df9 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 222 242 2.9E-64 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BEN78_14530 52a713440660099f8e80447086a56df9 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 110 133 2.9E-64 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BEN78_14530 52a713440660099f8e80447086a56df9 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 268 294 2.9E-64 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BEN78_14530 52a713440660099f8e80447086a56df9 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 1 16 2.9E-64 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BEN78_14530 52a713440660099f8e80447086a56df9 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 244 264 2.9E-64 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BEN78_14530 52a713440660099f8e80447086a56df9 330 Pfam PF14841 FliG middle domain 111 184 2.5E-26 T 13-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain BEN78_14530 52a713440660099f8e80447086a56df9 330 Gene3D G3DSA:1.10.220.30 1 78 8.4E-20 T 13-10-2018 BEN78_14530 52a713440660099f8e80447086a56df9 330 Gene3D G3DSA:1.10.220.30 191 329 3.3E-44 T 13-10-2018 BEN78_14530 52a713440660099f8e80447086a56df9 330 SUPERFAMILY SSF48029 110 321 5.23E-68 T 13-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical BEN78_14530 52a713440660099f8e80447086a56df9 330 Pfam PF01706 FliG C-terminal domain 214 320 4.5E-39 T 13-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal BEN78_14530 52a713440660099f8e80447086a56df9 330 Pfam PF14842 FliG N-terminal domain 1 101 9.4E-32 T 13-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain BEN78_14530 52a713440660099f8e80447086a56df9 330 PIRSF PIRSF003161 1 330 6.1E-117 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BEN78_14530 52a713440660099f8e80447086a56df9 330 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 1 328 2.3E-103 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BEN78_14530 52a713440660099f8e80447086a56df9 330 SUPERFAMILY SSF48029 2 118 3.79E-24 T 13-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical BEN78_14530 52a713440660099f8e80447086a56df9 330 Gene3D G3DSA:1.10.220.30 79 187 3.9E-29 T 13-10-2018 BEN78_16440 2af1892bd3a1cd6437a8e389e518b4f7 423 SUPERFAMILY SSF103473 8 420 3.14E-60 T 13-10-2018 IPR036259 MFS transporter superfamily BEN78_16440 2af1892bd3a1cd6437a8e389e518b4f7 423 Gene3D G3DSA:1.20.1250.20 9 421 1.1E-58 T 13-10-2018 BEN78_16440 2af1892bd3a1cd6437a8e389e518b4f7 423 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 19 410 7.6E-134 T 13-10-2018 IPR004736 MFS transporter, metabolite:H symporter GO:0016021|GO:0022857|GO:0055085 BEN78_16440 2af1892bd3a1cd6437a8e389e518b4f7 423 ProSitePatterns PS00216 Sugar transport proteins signature 1. 293 310 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BEN78_16440 2af1892bd3a1cd6437a8e389e518b4f7 423 Pfam PF07690 Major Facilitator Superfamily 18 371 4.0E-22 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN78_11310 7d076012e5749eae7939b5e6331ba69e 339 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 89 3.3E-7 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BEN78_11310 7d076012e5749eae7939b5e6331ba69e 339 SUPERFAMILY SSF50129 12 140 2.74E-34 T 13-10-2018 IPR011032 GroES-like superfamily BEN78_11310 7d076012e5749eae7939b5e6331ba69e 339 SMART SM00829 12 335 6.8E-11 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BEN78_11310 7d076012e5749eae7939b5e6331ba69e 339 Gene3D G3DSA:3.90.180.10 24 333 4.7E-102 T 13-10-2018 BEN78_11310 7d076012e5749eae7939b5e6331ba69e 339 Gene3D G3DSA:3.40.50.720 128 276 4.7E-102 T 13-10-2018 BEN78_11310 7d076012e5749eae7939b5e6331ba69e 339 SUPERFAMILY SSF51735 117 283 3.94E-36 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_11310 7d076012e5749eae7939b5e6331ba69e 339 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 338 7.7E-126 T 13-10-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 BEN78_11310 7d076012e5749eae7939b5e6331ba69e 339 Pfam PF13602 Zinc-binding dehydrogenase 193 335 1.2E-21 T 13-10-2018 BEN78_06830 e62e23134f564f027c1b4470d29f27ab 145 SUPERFAMILY SSF52821 19 143 1.7E-33 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily BEN78_06830 e62e23134f564f027c1b4470d29f27ab 145 SMART SM00450 42 139 5.8E-24 T 13-10-2018 IPR001763 Rhodanese-like domain BEN78_06830 e62e23134f564f027c1b4470d29f27ab 145 Pfam PF00581 Rhodanese-like domain 44 135 1.6E-19 T 13-10-2018 IPR001763 Rhodanese-like domain BEN78_06830 e62e23134f564f027c1b4470d29f27ab 145 Gene3D G3DSA:3.40.250.10 40 144 1.5E-28 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily BEN78_12520 bf0a4ba021cbb3c98f44231ecb50ef7f 241 Pfam PF08279 HTH domain 7 60 5.5E-14 T 13-10-2018 IPR013196 Helix-turn-helix, type 11 BEN78_12520 bf0a4ba021cbb3c98f44231ecb50ef7f 241 SUPERFAMILY SSF46785 5 63 1.95E-10 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_12520 bf0a4ba021cbb3c98f44231ecb50ef7f 241 Gene3D G3DSA:1.10.10.10 1 65 1.6E-15 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_12520 bf0a4ba021cbb3c98f44231ecb50ef7f 241 Pfam PF13280 WYL domain 137 226 1.4E-12 T 13-10-2018 IPR026881 WYL domain BEN78_14725 3bdd3a79d5106272fa9ff471be39b1b0 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 7.0E-38 T 13-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 BEN78_14725 3bdd3a79d5106272fa9ff471be39b1b0 72 SMART SM00316 2 72 1.0E-5 T 13-10-2018 IPR022967 RNA-binding domain, S1 BEN78_14725 3bdd3a79d5106272fa9ff471be39b1b0 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.715 T 13-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 BEN78_14725 3bdd3a79d5106272fa9ff471be39b1b0 72 SUPERFAMILY SSF50249 1 70 4.75E-29 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN78_14725 3bdd3a79d5106272fa9ff471be39b1b0 72 Gene3D G3DSA:2.40.50.140 1 72 2.8E-38 T 13-10-2018 BEN78_14725 3bdd3a79d5106272fa9ff471be39b1b0 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 8.7E-29 T 13-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 BEN78_11810 22fff929a1704400c492c3412fb2c123 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 61 77 5.1E-57 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BEN78_11810 22fff929a1704400c492c3412fb2c123 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 133 156 5.1E-57 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BEN78_11810 22fff929a1704400c492c3412fb2c123 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 211 235 5.1E-57 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BEN78_11810 22fff929a1704400c492c3412fb2c123 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 39 59 5.1E-57 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BEN78_11810 22fff929a1704400c492c3412fb2c123 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 84 100 5.1E-57 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BEN78_11810 22fff929a1704400c492c3412fb2c123 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 180 201 5.1E-57 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BEN78_11810 22fff929a1704400c492c3412fb2c123 276 Pfam PF00459 Inositol monophosphatase family 2 254 8.3E-66 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BEN78_11810 22fff929a1704400c492c3412fb2c123 276 Gene3D G3DSA:3.40.190.80 144 273 2.9E-36 T 13-10-2018 BEN78_11810 22fff929a1704400c492c3412fb2c123 276 Gene3D G3DSA:3.30.540.10 2 143 1.0E-47 T 13-10-2018 BEN78_11810 22fff929a1704400c492c3412fb2c123 276 SUPERFAMILY SSF56655 2 266 6.41E-80 T 13-10-2018 BEN78_11810 22fff929a1704400c492c3412fb2c123 276 PRINTS PR01959 SuhB family inositol monophosphatase signature 107 126 5.1E-16 T 13-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 BEN78_11810 22fff929a1704400c492c3412fb2c123 276 PRINTS PR01959 SuhB family inositol monophosphatase signature 159 185 5.1E-16 T 13-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 BEN78_11810 22fff929a1704400c492c3412fb2c123 276 PRINTS PR01959 SuhB family inositol monophosphatase signature 201 213 5.1E-16 T 13-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 BEN78_11810 22fff929a1704400c492c3412fb2c123 276 PRINTS PR01959 SuhB family inositol monophosphatase signature 18 40 5.1E-16 T 13-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 BEN78_11810 22fff929a1704400c492c3412fb2c123 276 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 214 228 - T 13-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 BEN78_11810 22fff929a1704400c492c3412fb2c123 276 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 84 97 - T 13-10-2018 IPR020583 Inositol monophosphatase, metal-binding site BEN78_12005 72a4da4902ede55904104878e287ee5f 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 28.987 T 13-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 BEN78_12005 72a4da4902ede55904104878e287ee5f 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 1.3E-48 T 13-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 BEN78_12005 72a4da4902ede55904104878e287ee5f 156 SUPERFAMILY SSF75217 1 154 5.23E-48 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases BEN78_12005 72a4da4902ede55904104878e287ee5f 156 PIRSF PIRSF004505 1 155 3.8E-45 T 13-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 BEN78_12005 72a4da4902ede55904104878e287ee5f 156 Gene3D G3DSA:3.40.1280.10 1 156 2.6E-50 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BEN78_12005 72a4da4902ede55904104878e287ee5f 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 155 1.2E-50 T 13-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 BEN78_15690 47b85f6c2a56743a2c9dad0cedafb743 256 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 14 238 3.7E-55 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 BEN78_15690 47b85f6c2a56743a2c9dad0cedafb743 256 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 14 237 28.789 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 BEN78_15690 47b85f6c2a56743a2c9dad0cedafb743 256 Pfam PF01168 Alanine racemase, N-terminal domain 16 238 1.4E-23 T 13-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN78_15690 47b85f6c2a56743a2c9dad0cedafb743 256 SUPERFAMILY SSF51419 11 236 1.2E-73 T 13-10-2018 IPR029066 PLP-binding barrel BEN78_15690 47b85f6c2a56743a2c9dad0cedafb743 256 PIRSF PIRSF004848 5 244 3.5E-68 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 BEN78_15690 47b85f6c2a56743a2c9dad0cedafb743 256 Gene3D G3DSA:3.20.20.10 2 248 2.9E-86 T 13-10-2018 IPR029066 PLP-binding barrel BEN78_14345 f72d7d7eda13e4f269d516592d9f47d1 1000 Gene3D G3DSA:2.170.130.10 55 201 1.3E-24 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_14345 f72d7d7eda13e4f269d516592d9f47d1 1000 Pfam PF00593 TonB dependent receptor 428 997 1.4E-21 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_14345 f72d7d7eda13e4f269d516592d9f47d1 1000 SUPERFAMILY SSF56935 47 999 1.83E-63 T 13-10-2018 BEN78_14345 f72d7d7eda13e4f269d516592d9f47d1 1000 Pfam PF07715 TonB-dependent Receptor Plug Domain 75 196 1.4E-16 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_07540 f920f3a8ed326d161d2a0fd6c5eb44d3 648 Gene3D G3DSA:3.30.870.10 69 261 1.9E-39 T 13-10-2018 BEN78_07540 f920f3a8ed326d161d2a0fd6c5eb44d3 648 SMART SM00155 493 520 7.7E-4 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BEN78_07540 f920f3a8ed326d161d2a0fd6c5eb44d3 648 SMART SM00155 186 213 0.55 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BEN78_07540 f920f3a8ed326d161d2a0fd6c5eb44d3 648 SUPERFAMILY SSF56024 327 565 2.92E-25 T 13-10-2018 BEN78_07540 f920f3a8ed326d161d2a0fd6c5eb44d3 648 SUPERFAMILY SSF56024 62 257 4.19E-39 T 13-10-2018 BEN78_07540 f920f3a8ed326d161d2a0fd6c5eb44d3 648 Gene3D G3DSA:3.30.870.10 481 565 2.5E-11 T 13-10-2018 BEN78_07540 f920f3a8ed326d161d2a0fd6c5eb44d3 648 Gene3D G3DSA:3.30.870.10 316 414 7.5E-8 T 13-10-2018 BEN78_07540 f920f3a8ed326d161d2a0fd6c5eb44d3 648 Pfam PF13091 PLD-like domain 337 546 7.3E-10 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BEN78_07540 f920f3a8ed326d161d2a0fd6c5eb44d3 648 Pfam PF13091 PLD-like domain 91 245 2.4E-16 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BEN78_13885 7a5e7bebd758c30f9ced5d3ab2115569 445 Gene3D G3DSA:3.40.50.150 83 439 1.6E-102 T 13-10-2018 BEN78_13885 7a5e7bebd758c30f9ced5d3ab2115569 445 Gene3D G3DSA:2.40.50.140 1 82 9.7E-23 T 13-10-2018 BEN78_13885 7a5e7bebd758c30f9ced5d3ab2115569 445 Gene3D G3DSA:3.40.1350.30 130 276 1.6E-102 T 13-10-2018 BEN78_13885 7a5e7bebd758c30f9ced5d3ab2115569 445 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 427 437 - T 13-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site BEN78_13885 7a5e7bebd758c30f9ced5d3ab2115569 445 Pfam PF01938 TRAM domain 12 48 2.8E-5 T 13-10-2018 IPR002792 TRAM domain BEN78_13885 7a5e7bebd758c30f9ced5d3ab2115569 445 SUPERFAMILY SSF50249 11 68 1.37E-10 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN78_13885 7a5e7bebd758c30f9ced5d3ab2115569 445 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 274 443 1.5E-21 T 13-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 BEN78_13885 7a5e7bebd758c30f9ced5d3ab2115569 445 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 265 437 2.0E-56 T 13-10-2018 BEN78_13885 7a5e7bebd758c30f9ced5d3ab2115569 445 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 375 405 - T 13-10-2018 IPR030390 RNA methyltransferase TrmA, active site BEN78_13885 7a5e7bebd758c30f9ced5d3ab2115569 445 SUPERFAMILY SSF53335 71 444 1.72E-81 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_13885 7a5e7bebd758c30f9ced5d3ab2115569 445 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 12 445 66.045 T 13-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 BEN78_10225 7cd52d3c633bb1b42c15c8351752c2c6 205 PIRSF PIRSF011444 15 195 9.1E-77 T 13-10-2018 IPR009706 Protein of unknown function DUF1287 BEN78_10225 7cd52d3c633bb1b42c15c8351752c2c6 205 ProDom PD357862 YIJF PERIPLASMIC ECS4873 PRECURSOR CC1379 SIGNAL DOMAIN PM0035 30 192 7.0E-57 T 13-10-2018 IPR009706 Protein of unknown function DUF1287 BEN78_10225 7cd52d3c633bb1b42c15c8351752c2c6 205 Pfam PF06940 Domain of unknown function (DUF1287) 32 192 1.2E-63 T 13-10-2018 IPR009706 Protein of unknown function DUF1287 BEN78_00385 21b3fab445871f6e3473941b002bc545 253 PIRSF PIRSF009160 1 253 1.1E-97 T 13-10-2018 IPR010539 Protein of unknown function UCP009160 BEN78_00385 21b3fab445871f6e3473941b002bc545 253 Pfam PF12811 Bax inhibitor 1 like 24 251 4.9E-80 T 13-10-2018 IPR010539 Protein of unknown function UCP009160 BEN78_14095 058ad4374b1bb9c9d81bec7b45e713ba 321 SUPERFAMILY SSF56524 65 317 1.83E-88 T 13-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 BEN78_14095 058ad4374b1bb9c9d81bec7b45e713ba 321 Pfam PF00174 Oxidoreductase molybdopterin binding domain 99 254 3.8E-30 T 13-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 BEN78_14095 058ad4374b1bb9c9d81bec7b45e713ba 321 Gene3D G3DSA:3.90.420.10 57 321 3.7E-104 T 13-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 BEN78_14095 058ad4374b1bb9c9d81bec7b45e713ba 321 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 7 321 54.002 T 13-10-2018 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 BEN78_07220 c584c6b94dcdf7575af0c444e5786b22 108 Gene3D G3DSA:1.10.260.40 25 100 1.6E-12 T 13-10-2018 BEN78_07220 c584c6b94dcdf7575af0c444e5786b22 108 SUPERFAMILY SSF47413 28 89 8.16E-13 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN78_07220 c584c6b94dcdf7575af0c444e5786b22 108 SMART SM00530 32 87 4.7E-8 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN78_07220 c584c6b94dcdf7575af0c444e5786b22 108 Pfam PF13560 Helix-turn-helix domain 28 85 1.5E-9 T 13-10-2018 BEN78_16620 e9a3112f52bdd1eba6be7d051c4d19ea 445 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 17 440 40.16 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BEN78_16620 e9a3112f52bdd1eba6be7d051c4d19ea 445 SUPERFAMILY SSF53720 33 440 5.69E-77 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BEN78_16620 e9a3112f52bdd1eba6be7d051c4d19ea 445 Gene3D G3DSA:3.40.50.1980 44 245 2.3E-117 T 13-10-2018 BEN78_16620 e9a3112f52bdd1eba6be7d051c4d19ea 445 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 243 275 - T 13-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 BEN78_16620 e9a3112f52bdd1eba6be7d051c4d19ea 445 PIRSF PIRSF000099 10 443 2.5E-158 T 13-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BEN78_16620 e9a3112f52bdd1eba6be7d051c4d19ea 445 Gene3D G3DSA:3.40.50.1980 247 362 2.3E-117 T 13-10-2018 BEN78_16620 e9a3112f52bdd1eba6be7d051c4d19ea 445 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 46 439 1.3E-155 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BEN78_16620 e9a3112f52bdd1eba6be7d051c4d19ea 445 Pfam PF00815 Histidinol dehydrogenase 35 440 2.1E-159 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BEN78_16620 e9a3112f52bdd1eba6be7d051c4d19ea 445 PRINTS PR00083 Histidinol dehydrogenase signature 265 284 2.2E-90 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BEN78_16620 e9a3112f52bdd1eba6be7d051c4d19ea 445 PRINTS PR00083 Histidinol dehydrogenase signature 46 70 2.2E-90 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BEN78_16620 e9a3112f52bdd1eba6be7d051c4d19ea 445 PRINTS PR00083 Histidinol dehydrogenase signature 147 173 2.2E-90 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BEN78_16620 e9a3112f52bdd1eba6be7d051c4d19ea 445 PRINTS PR00083 Histidinol dehydrogenase signature 212 237 2.2E-90 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BEN78_16620 e9a3112f52bdd1eba6be7d051c4d19ea 445 PRINTS PR00083 Histidinol dehydrogenase signature 243 264 2.2E-90 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BEN78_16620 e9a3112f52bdd1eba6be7d051c4d19ea 445 PRINTS PR00083 Histidinol dehydrogenase signature 333 358 2.2E-90 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BEN78_16620 e9a3112f52bdd1eba6be7d051c4d19ea 445 PRINTS PR00083 Histidinol dehydrogenase signature 374 392 2.2E-90 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BEN78_16620 e9a3112f52bdd1eba6be7d051c4d19ea 445 PRINTS PR00083 Histidinol dehydrogenase signature 182 208 2.2E-90 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BEN78_07710 09297aef74ba336463aef9fcf6a09307 356 SUPERFAMILY SSF56219 99 318 1.44E-30 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BEN78_07710 09297aef74ba336463aef9fcf6a09307 356 Gene3D G3DSA:3.60.10.10 99 321 2.1E-23 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BEN78_07710 09297aef74ba336463aef9fcf6a09307 356 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 111 310 7.4E-17 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase BEN78_07400 8684c110811a172755679fa4c934fbad 309 Pfam PF03466 LysR substrate binding domain 93 294 5.6E-26 T 13-10-2018 IPR005119 LysR, substrate-binding BEN78_07400 8684c110811a172755679fa4c934fbad 309 Gene3D G3DSA:3.40.190.10 106 290 2.4E-44 T 13-10-2018 BEN78_07400 8684c110811a172755679fa4c934fbad 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 2.1E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_07400 8684c110811a172755679fa4c934fbad 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 2.1E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_07400 8684c110811a172755679fa4c934fbad 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 2.1E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_07400 8684c110811a172755679fa4c934fbad 309 SUPERFAMILY SSF46785 8 89 6.69E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_07400 8684c110811a172755679fa4c934fbad 309 SUPERFAMILY SSF53850 96 292 6.15E-28 T 13-10-2018 BEN78_07400 8684c110811a172755679fa4c934fbad 309 Gene3D G3DSA:3.40.190.10 166 264 2.4E-44 T 13-10-2018 BEN78_07400 8684c110811a172755679fa4c934fbad 309 Gene3D G3DSA:1.10.10.10 10 97 6.2E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_07400 8684c110811a172755679fa4c934fbad 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 70 1.5E-19 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_14165 9fddb35759916c27bd6f8a2226d9b66b 705 SMART SM00091 338 404 5.8E-7 T 13-10-2018 IPR000014 PAS domain BEN78_14165 9fddb35759916c27bd6f8a2226d9b66b 705 Pfam PF00989 PAS fold 339 436 7.7E-10 T 13-10-2018 IPR013767 PAS fold GO:0006355 BEN78_14165 9fddb35759916c27bd6f8a2226d9b66b 705 SMART SM00388 482 550 3.2E-10 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_14165 9fddb35759916c27bd6f8a2226d9b66b 705 SUPERFAMILY SSF55785 328 446 2.79E-16 T 13-10-2018 IPR035965 PAS domain superfamily BEN78_14165 9fddb35759916c27bd6f8a2226d9b66b 705 SMART SM01079 62 252 5.1E-41 T 13-10-2018 IPR006189 CHASE domain BEN78_14165 9fddb35759916c27bd6f8a2226d9b66b 705 Gene3D G3DSA:3.30.565.10 552 697 8.0E-33 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_14165 9fddb35759916c27bd6f8a2226d9b66b 705 Pfam PF03924 CHASE domain 67 250 4.6E-42 T 13-10-2018 IPR006189 CHASE domain BEN78_14165 9fddb35759916c27bd6f8a2226d9b66b 705 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 592 697 6.6E-19 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_14165 9fddb35759916c27bd6f8a2226d9b66b 705 Gene3D G3DSA:3.30.450.350 67 270 8.2E-23 T 13-10-2018 BEN78_14165 9fddb35759916c27bd6f8a2226d9b66b 705 Gene3D G3DSA:1.10.287.130 447 548 1.4E-17 T 13-10-2018 BEN78_14165 9fddb35759916c27bd6f8a2226d9b66b 705 SMART SM00387 591 700 4.4E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_14165 9fddb35759916c27bd6f8a2226d9b66b 705 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 334 457 2.8E-20 T 13-10-2018 IPR000014 PAS domain BEN78_14165 9fddb35759916c27bd6f8a2226d9b66b 705 PRINTS PR00344 Bacterial sensor protein C-terminal signature 627 641 1.1E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_14165 9fddb35759916c27bd6f8a2226d9b66b 705 PRINTS PR00344 Bacterial sensor protein C-terminal signature 660 678 1.1E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_14165 9fddb35759916c27bd6f8a2226d9b66b 705 PRINTS PR00344 Bacterial sensor protein C-terminal signature 684 697 1.1E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_14165 9fddb35759916c27bd6f8a2226d9b66b 705 PRINTS PR00344 Bacterial sensor protein C-terminal signature 645 655 1.1E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_14165 9fddb35759916c27bd6f8a2226d9b66b 705 SUPERFAMILY SSF47384 467 551 1.1E-16 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN78_14165 9fddb35759916c27bd6f8a2226d9b66b 705 Pfam PF00512 His Kinase A (phospho-acceptor) domain 484 549 2.4E-9 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_14165 9fddb35759916c27bd6f8a2226d9b66b 705 SUPERFAMILY SSF55874 551 700 7.6E-33 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_14165 9fddb35759916c27bd6f8a2226d9b66b 705 Gene3D G3DSA:3.30.450.20 326 446 1.9E-15 T 13-10-2018 BEN78_12385 ded09e2ac873f91edc79bf1e1ddb65f9 316 Gene3D G3DSA:3.40.1010.20 97 198 6.7E-111 T 13-10-2018 BEN78_12385 ded09e2ac873f91edc79bf1e1ddb65f9 316 Pfam PF02401 LytB protein 3 284 3.6E-92 T 13-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 BEN78_12385 ded09e2ac873f91edc79bf1e1ddb65f9 316 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 286 1.1E-99 T 13-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 BEN78_12385 ded09e2ac873f91edc79bf1e1ddb65f9 316 Gene3D G3DSA:3.40.50.11270 12 96 6.7E-111 T 13-10-2018 BEN78_12385 ded09e2ac873f91edc79bf1e1ddb65f9 316 Gene3D G3DSA:3.40.1010.20 6 284 6.7E-111 T 13-10-2018 BEN78_12385 ded09e2ac873f91edc79bf1e1ddb65f9 316 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 288 38.81 T 13-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 BEN78_07650 d168dde1c3cad6a0da8e5e7e09b2842c 255 SUPERFAMILY SSF51735 1 245 6.16E-86 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_07650 d168dde1c3cad6a0da8e5e7e09b2842c 255 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 172 0.0025 T 13-10-2018 BEN78_07650 d168dde1c3cad6a0da8e5e7e09b2842c 255 Gene3D G3DSA:3.40.50.720 1 250 7.0E-88 T 13-10-2018 BEN78_07650 d168dde1c3cad6a0da8e5e7e09b2842c 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 7.5E-45 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_07650 d168dde1c3cad6a0da8e5e7e09b2842c 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 7.5E-45 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_07650 d168dde1c3cad6a0da8e5e7e09b2842c 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 7.5E-45 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_07650 d168dde1c3cad6a0da8e5e7e09b2842c 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 7.5E-45 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_07650 d168dde1c3cad6a0da8e5e7e09b2842c 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 7.5E-45 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_07650 d168dde1c3cad6a0da8e5e7e09b2842c 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 7.5E-45 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_07650 d168dde1c3cad6a0da8e5e7e09b2842c 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 244 8.7E-73 T 13-10-2018 BEN78_07650 d168dde1c3cad6a0da8e5e7e09b2842c 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 6.3E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_07650 d168dde1c3cad6a0da8e5e7e09b2842c 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 6.3E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_07650 d168dde1c3cad6a0da8e5e7e09b2842c 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 6.3E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_14125 145bdd30c2042cedeb61d45c65aa6b24 426 PIRSF PIRSF001529 1 426 2.2E-165 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BEN78_14125 145bdd30c2042cedeb61d45c65aa6b24 426 Gene3D G3DSA:1.10.287.40 1 105 6.8E-16 T 13-10-2018 BEN78_14125 145bdd30c2042cedeb61d45c65aa6b24 426 PRINTS PR00981 Seryl-tRNA synthetase signature 278 291 1.9E-33 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BEN78_14125 145bdd30c2042cedeb61d45c65aa6b24 426 PRINTS PR00981 Seryl-tRNA synthetase signature 266 278 1.9E-33 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BEN78_14125 145bdd30c2042cedeb61d45c65aa6b24 426 PRINTS PR00981 Seryl-tRNA synthetase signature 318 331 1.9E-33 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BEN78_14125 145bdd30c2042cedeb61d45c65aa6b24 426 PRINTS PR00981 Seryl-tRNA synthetase signature 335 351 1.9E-33 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BEN78_14125 145bdd30c2042cedeb61d45c65aa6b24 426 PRINTS PR00981 Seryl-tRNA synthetase signature 353 369 1.9E-33 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BEN78_14125 145bdd30c2042cedeb61d45c65aa6b24 426 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 108 1.1E-26 T 13-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 BEN78_14125 145bdd30c2042cedeb61d45c65aa6b24 426 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 419 4.3E-161 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BEN78_14125 145bdd30c2042cedeb61d45c65aa6b24 426 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 424 38.93 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BEN78_14125 145bdd30c2042cedeb61d45c65aa6b24 426 Gene3D G3DSA:3.30.930.10 106 425 2.3E-116 T 13-10-2018 BEN78_14125 145bdd30c2042cedeb61d45c65aa6b24 426 SUPERFAMILY SSF46589 1 113 2.09E-24 T 13-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 BEN78_14125 145bdd30c2042cedeb61d45c65aa6b24 426 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 226 401 4.7E-34 T 13-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN78_14125 145bdd30c2042cedeb61d45c65aa6b24 426 SUPERFAMILY SSF55681 117 422 5.85E-98 T 13-10-2018 BEN78_00485 76d9377b096b008afbb5f2e4c7039ffc 162 Pfam PF00293 NUDIX domain 12 134 7.8E-16 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BEN78_00485 76d9377b096b008afbb5f2e4c7039ffc 162 Gene3D G3DSA:3.90.79.10 9 155 1.2E-30 T 13-10-2018 BEN78_00485 76d9377b096b008afbb5f2e4c7039ffc 162 ProSitePatterns PS00893 Nudix box signature. 43 64 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BEN78_00485 76d9377b096b008afbb5f2e4c7039ffc 162 SUPERFAMILY SSF55811 2 138 8.8E-26 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BEN78_00485 76d9377b096b008afbb5f2e4c7039ffc 162 PRINTS PR01402 Mutator MutX protein signature 27 42 2.7E-9 T 13-10-2018 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 BEN78_00485 76d9377b096b008afbb5f2e4c7039ffc 162 PRINTS PR01402 Mutator MutX protein signature 105 125 2.7E-9 T 13-10-2018 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 BEN78_00485 76d9377b096b008afbb5f2e4c7039ffc 162 PRINTS PR01402 Mutator MutX protein signature 9 27 2.7E-9 T 13-10-2018 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 BEN78_00485 76d9377b096b008afbb5f2e4c7039ffc 162 PRINTS PR01402 Mutator MutX protein signature 125 142 2.7E-9 T 13-10-2018 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 BEN78_05355 bdd431047294cc535f16c434729607bb 348 SUPERFAMILY SSF89000 288 337 7.45E-19 T 13-10-2018 BEN78_05355 bdd431047294cc535f16c434729607bb 348 TIGRFAM TIGR03217 4OH_2_O_val_ald: 4-hydroxy-2-oxovalerate aldolase 4 336 2.1E-173 T 13-10-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 BEN78_05355 bdd431047294cc535f16c434729607bb 348 ProDom PD005364 ALDOLASE 4-HYDROXY-2-OXOVALERATE LYASE PYRUVATE 4.1.3.- PLASMID HMG-COA LYASE-LIKE TRANSFERASE HOA 272 334 3.0E-26 T 13-10-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 BEN78_05355 bdd431047294cc535f16c434729607bb 348 Hamap MF_01656 4-hydroxy-2-oxovalerate aldolase [mhpE]. 1 342 218.875 T 13-10-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 BEN78_05355 bdd431047294cc535f16c434729607bb 348 Gene3D G3DSA:3.20.20.70 1 268 1.3E-85 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_05355 bdd431047294cc535f16c434729607bb 348 SUPERFAMILY SSF51569 3 276 2.75E-63 T 13-10-2018 BEN78_05355 bdd431047294cc535f16c434729607bb 348 Pfam PF00682 HMGL-like 6 264 1.1E-68 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 BEN78_05355 bdd431047294cc535f16c434729607bb 348 Gene3D G3DSA:1.10.8.60 275 342 4.2E-33 T 13-10-2018 BEN78_05355 bdd431047294cc535f16c434729607bb 348 Pfam PF07836 DmpG-like communication domain 274 334 1.6E-31 T 13-10-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 BEN78_01395 c4d41f34d4e8d2d1bd6eb21fc9d82787 277 PIRSF PIRSF015626 1 261 3.6E-81 T 13-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 BEN78_01395 c4d41f34d4e8d2d1bd6eb21fc9d82787 277 Pfam PF02634 FdhD/NarQ family 20 257 1.7E-74 T 13-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 BEN78_01395 c4d41f34d4e8d2d1bd6eb21fc9d82787 277 Gene3D G3DSA:3.40.140.10 111 263 4.9E-50 T 13-10-2018 BEN78_01395 c4d41f34d4e8d2d1bd6eb21fc9d82787 277 SUPERFAMILY SSF53927 3 257 2.92E-78 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 BEN78_01395 c4d41f34d4e8d2d1bd6eb21fc9d82787 277 Gene3D G3DSA:3.10.20.10 22 108 5.7E-9 T 13-10-2018 BEN78_01395 c4d41f34d4e8d2d1bd6eb21fc9d82787 277 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 17 257 7.3E-67 T 13-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 BEN78_01395 c4d41f34d4e8d2d1bd6eb21fc9d82787 277 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 3 258 34.053 T 13-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 BEN78_05285 6efc6393703748a67b15284409372a69 63 Gene3D G3DSA:2.20.28.10 4 63 3.4E-28 T 13-10-2018 BEN78_05285 6efc6393703748a67b15284409372a69 63 PRINTS PR00163 Rubredoxin signature 42 58 3.1E-8 T 13-10-2018 IPR024935 Rubredoxin domain GO:0005506 BEN78_05285 6efc6393703748a67b15284409372a69 63 PRINTS PR00163 Rubredoxin signature 12 28 3.1E-8 T 13-10-2018 IPR024935 Rubredoxin domain GO:0005506 BEN78_05285 6efc6393703748a67b15284409372a69 63 PIRSF PIRSF000071 4 63 7.1E-24 T 13-10-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 BEN78_05285 6efc6393703748a67b15284409372a69 63 Pfam PF00301 Rubredoxin 13 58 2.0E-22 T 13-10-2018 IPR024935 Rubredoxin domain GO:0005506 BEN78_05285 6efc6393703748a67b15284409372a69 63 SUPERFAMILY SSF57802 9 61 1.85E-22 T 13-10-2018 BEN78_05285 6efc6393703748a67b15284409372a69 63 ProSitePatterns PS00202 Rubredoxin signature. 42 52 - T 13-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 BEN78_09555 e7729a045087c33b3de98ea697b6dd10 361 ProSitePatterns PS01348 MraY family signature 2. 190 201 - T 13-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN78_09555 e7729a045087c33b3de98ea697b6dd10 361 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 359 24.648 T 13-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN78_09555 e7729a045087c33b3de98ea697b6dd10 361 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 3.3E-5 T 13-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN78_09555 e7729a045087c33b3de98ea697b6dd10 361 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 13-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN78_09555 e7729a045087c33b3de98ea697b6dd10 361 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 361 8.8E-130 T 13-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN78_09555 e7729a045087c33b3de98ea697b6dd10 361 Pfam PF00953 Glycosyl transferase family 4 99 285 7.0E-33 T 13-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 BEN78_05635 97ea0dddf5c34cf2ad21416dabd1de0f 330 Hamap MF_00323 Ferrochelatase [hemH]. 13 326 34.864 T 13-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 BEN78_05635 97ea0dddf5c34cf2ad21416dabd1de0f 330 Gene3D G3DSA:3.40.50.1400 169 307 7.3E-88 T 13-10-2018 BEN78_05635 97ea0dddf5c34cf2ad21416dabd1de0f 330 Gene3D G3DSA:3.40.50.1400 16 325 7.3E-88 T 13-10-2018 BEN78_05635 97ea0dddf5c34cf2ad21416dabd1de0f 330 TIGRFAM TIGR00109 hemH: ferrochelatase 13 325 9.3E-88 T 13-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 BEN78_05635 97ea0dddf5c34cf2ad21416dabd1de0f 330 ProSitePatterns PS00534 Ferrochelatase signature. 195 214 - T 13-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 BEN78_05635 97ea0dddf5c34cf2ad21416dabd1de0f 330 Pfam PF00762 Ferrochelatase 15 325 3.5E-101 T 13-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 BEN78_05635 97ea0dddf5c34cf2ad21416dabd1de0f 330 SUPERFAMILY SSF53800 15 329 2.35E-94 T 13-10-2018 BEN78_06155 b1fbbe817d8935aea305411c6a795c1f 629 SUPERFAMILY SSF50621 448 556 8.37E-7 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BEN78_06155 b1fbbe817d8935aea305411c6a795c1f 629 Gene3D G3DSA:3.20.20.10 66 345 1.1E-218 T 13-10-2018 IPR029066 PLP-binding barrel BEN78_06155 b1fbbe817d8935aea305411c6a795c1f 629 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 2 625 42.453 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BEN78_06155 b1fbbe817d8935aea305411c6a795c1f 629 TIGRFAM TIGR01273 speA: arginine decarboxylase 4 623 2.6E-258 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BEN78_06155 b1fbbe817d8935aea305411c6a795c1f 629 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 79 340 1.7E-44 T 13-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 BEN78_06155 b1fbbe817d8935aea305411c6a795c1f 629 PRINTS PR01180 Arginine decarboxylase signature 65 80 1.1E-69 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BEN78_06155 b1fbbe817d8935aea305411c6a795c1f 629 PRINTS PR01180 Arginine decarboxylase signature 193 215 1.1E-69 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BEN78_06155 b1fbbe817d8935aea305411c6a795c1f 629 PRINTS PR01180 Arginine decarboxylase signature 457 478 1.1E-69 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BEN78_06155 b1fbbe817d8935aea305411c6a795c1f 629 PRINTS PR01180 Arginine decarboxylase signature 320 337 1.1E-69 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BEN78_06155 b1fbbe817d8935aea305411c6a795c1f 629 PRINTS PR01180 Arginine decarboxylase signature 143 158 1.1E-69 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BEN78_06155 b1fbbe817d8935aea305411c6a795c1f 629 PRINTS PR01180 Arginine decarboxylase signature 169 190 1.1E-69 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BEN78_06155 b1fbbe817d8935aea305411c6a795c1f 629 PRINTS PR01180 Arginine decarboxylase signature 89 103 1.1E-69 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BEN78_06155 b1fbbe817d8935aea305411c6a795c1f 629 PRINTS PR01180 Arginine decarboxylase signature 535 556 1.1E-69 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BEN78_06155 b1fbbe817d8935aea305411c6a795c1f 629 PRINTS PR01180 Arginine decarboxylase signature 482 507 1.1E-69 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BEN78_06155 b1fbbe817d8935aea305411c6a795c1f 629 Gene3D G3DSA:1.20.58.930 362 453 1.1E-218 T 13-10-2018 BEN78_06155 b1fbbe817d8935aea305411c6a795c1f 629 PIRSF PIRSF001336 1 626 3.6E-243 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BEN78_06155 b1fbbe817d8935aea305411c6a795c1f 629 SUPERFAMILY SSF51419 65 342 1.78E-64 T 13-10-2018 IPR029066 PLP-binding barrel BEN78_06155 b1fbbe817d8935aea305411c6a795c1f 629 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 97 115 1.1E-15 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BEN78_06155 b1fbbe817d8935aea305411c6a795c1f 629 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 120 132 1.1E-15 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BEN78_06155 b1fbbe817d8935aea305411c6a795c1f 629 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 535 548 1.1E-15 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BEN78_06155 b1fbbe817d8935aea305411c6a795c1f 629 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 236 249 1.1E-15 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BEN78_06155 b1fbbe817d8935aea305411c6a795c1f 629 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 330 349 1.1E-15 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BEN78_06155 b1fbbe817d8935aea305411c6a795c1f 629 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 271 287 - T 13-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site BEN78_06155 b1fbbe817d8935aea305411c6a795c1f 629 Gene3D G3DSA:2.40.37.10 13 561 1.1E-218 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BEN78_01945 5aa560e208c359a2e0710eef8a992919 292 PIRSF PIRSF006250 15 292 3.9E-83 T 13-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 BEN78_01945 5aa560e208c359a2e0710eef8a992919 292 SUPERFAMILY SSF51690 120 289 3.73E-51 T 13-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 BEN78_01945 5aa560e208c359a2e0710eef8a992919 292 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 31 117 4.2E-23 T 13-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 BEN78_01945 5aa560e208c359a2e0710eef8a992919 292 Gene3D G3DSA:3.90.1170.20 18 288 3.9E-101 T 13-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 BEN78_01945 5aa560e208c359a2e0710eef8a992919 292 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 22 288 2.0E-82 T 13-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 BEN78_01945 5aa560e208c359a2e0710eef8a992919 292 Gene3D G3DSA:3.20.20.70 128 279 3.9E-101 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_01945 5aa560e208c359a2e0710eef8a992919 292 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 120 288 4.8E-50 T 13-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 BEN78_01945 5aa560e208c359a2e0710eef8a992919 292 SUPERFAMILY SSF54675 17 117 2.24E-28 T 13-10-2018 BEN78_12455 42365b0586821f96f32be6da399449c4 262 Pfam PF01578 Cytochrome C assembly protein 59 256 6.1E-32 T 13-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 BEN78_07240 357bc9b44e701abc58ab6b51b2c8b011 486 Gene3D G3DSA:3.40.190.10 21 271 4.4E-72 T 13-10-2018 BEN78_07240 357bc9b44e701abc58ab6b51b2c8b011 486 Gene3D G3DSA:3.40.190.120 114 215 4.4E-72 T 13-10-2018 BEN78_07240 357bc9b44e701abc58ab6b51b2c8b011 486 SUPERFAMILY SSF53850 20 271 1.47E-53 T 13-10-2018 BEN78_07240 357bc9b44e701abc58ab6b51b2c8b011 486 SUPERFAMILY SSF161098 284 464 2.88E-31 T 13-10-2018 IPR035906 MetI-like superfamily BEN78_07240 357bc9b44e701abc58ab6b51b2c8b011 486 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 21 271 9.0E-55 T 13-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 BEN78_07240 357bc9b44e701abc58ab6b51b2c8b011 486 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 308 478 9.1E-20 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN78_07240 357bc9b44e701abc58ab6b51b2c8b011 486 Gene3D G3DSA:1.10.3720.10 283 475 7.7E-26 T 13-10-2018 IPR035906 MetI-like superfamily BEN78_06600 9d4710a87549d6ceaa04d3b600365587 131 Gene3D G3DSA:2.170.150.70 11 126 1.5E-34 T 13-10-2018 BEN78_06600 9d4710a87549d6ceaa04d3b600365587 131 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 35 107 9.4E-5 T 13-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 BEN78_06600 9d4710a87549d6ceaa04d3b600365587 131 SUPERFAMILY SSF51316 10 111 1.78E-25 T 13-10-2018 IPR011057 Mss4-like superfamily BEN78_08515 c85d730eab76b57deba75457b58382e4 362 SUPERFAMILY SSF55869 43 103 6.15E-23 T 13-10-2018 IPR035447 DNA topoisomerase I, N-terminal BEN78_08515 c85d730eab76b57deba75457b58382e4 362 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 311 322 3.7E-5 T 13-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 BEN78_08515 c85d730eab76b57deba75457b58382e4 362 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 166 180 3.7E-5 T 13-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 BEN78_08515 c85d730eab76b57deba75457b58382e4 362 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 253 267 3.7E-5 T 13-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 BEN78_08515 c85d730eab76b57deba75457b58382e4 362 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 143 162 3.7E-5 T 13-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 BEN78_08515 c85d730eab76b57deba75457b58382e4 362 Gene3D G3DSA:3.30.66.10 29 109 1.3E-33 T 13-10-2018 IPR035447 DNA topoisomerase I, N-terminal BEN78_08515 c85d730eab76b57deba75457b58382e4 362 SUPERFAMILY SSF56349 99 330 4.24E-61 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BEN78_08515 c85d730eab76b57deba75457b58382e4 362 Gene3D G3DSA:1.10.132.120 111 339 1.1E-80 T 13-10-2018 BEN78_08515 c85d730eab76b57deba75457b58382e4 362 Pfam PF01028 Eukaryotic DNA topoisomerase I, catalytic core 109 312 2.0E-22 T 13-10-2018 IPR013500 DNA topoisomerase I, catalytic core, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 BEN78_08515 c85d730eab76b57deba75457b58382e4 362 Gene3D G3DSA:3.90.15.10 134 254 1.1E-80 T 13-10-2018 IPR014711 DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 BEN78_00700 575f425f6501711717cbf34c1f484b53 381 SUPERFAMILY SSF53383 3 380 3.72E-105 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_00700 575f425f6501711717cbf34c1f484b53 381 Pfam PF00155 Aminotransferase class I and II 27 378 2.0E-60 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BEN78_00700 575f425f6501711717cbf34c1f484b53 381 Gene3D G3DSA:3.40.640.10 39 278 4.0E-140 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN78_00700 575f425f6501711717cbf34c1f484b53 381 Gene3D G3DSA:3.90.1150.10 15 378 4.0E-140 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN78_05530 b3df17a3ac9576f7e34c01de265f6d4c 336 Gene3D G3DSA:3.30.565.10 181 335 5.7E-40 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_05530 b3df17a3ac9576f7e34c01de265f6d4c 336 SMART SM00387 222 333 7.2E-28 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_05530 b3df17a3ac9576f7e34c01de265f6d4c 336 SUPERFAMILY SSF47384 108 178 4.9E-8 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN78_05530 b3df17a3ac9576f7e34c01de265f6d4c 336 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 224 331 4.2E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_05530 b3df17a3ac9576f7e34c01de265f6d4c 336 Gene3D G3DSA:1.10.287.130 116 177 1.2E-16 T 13-10-2018 BEN78_05530 b3df17a3ac9576f7e34c01de265f6d4c 336 SUPERFAMILY SSF55874 173 331 3.27E-36 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_05530 b3df17a3ac9576f7e34c01de265f6d4c 336 Pfam PF00512 His Kinase A (phospho-acceptor) domain 112 178 3.0E-8 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_05530 b3df17a3ac9576f7e34c01de265f6d4c 336 PRINTS PR00344 Bacterial sensor protein C-terminal signature 317 330 9.2E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_05530 b3df17a3ac9576f7e34c01de265f6d4c 336 PRINTS PR00344 Bacterial sensor protein C-terminal signature 293 311 9.2E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_05530 b3df17a3ac9576f7e34c01de265f6d4c 336 PRINTS PR00344 Bacterial sensor protein C-terminal signature 282 292 9.2E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_05530 b3df17a3ac9576f7e34c01de265f6d4c 336 PRINTS PR00344 Bacterial sensor protein C-terminal signature 264 278 9.2E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_05530 b3df17a3ac9576f7e34c01de265f6d4c 336 SMART SM00388 111 180 4.3E-9 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_01830 a84302903e7aa6e9c476eb57d462c7ad 470 Pfam PF04055 Radical SAM superfamily 67 240 7.7E-17 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BEN78_01830 a84302903e7aa6e9c476eb57d462c7ad 470 SMART SM00729 62 285 2.3E-45 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BEN78_01830 a84302903e7aa6e9c476eb57d462c7ad 470 Gene3D G3DSA:1.10.10.920 377 470 2.1E-30 T 13-10-2018 BEN78_01830 a84302903e7aa6e9c476eb57d462c7ad 470 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 14 470 1.5E-167 T 13-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 BEN78_01830 a84302903e7aa6e9c476eb57d462c7ad 470 Pfam PF06969 HemN C-terminal domain 378 443 3.9E-8 T 13-10-2018 IPR010723 HemN, C-terminal BEN78_01830 a84302903e7aa6e9c476eb57d462c7ad 470 Gene3D G3DSA:3.80.30.20 10 376 1.9E-114 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe BEN78_01830 a84302903e7aa6e9c476eb57d462c7ad 470 SUPERFAMILY SSF102114 12 457 5.89E-131 T 13-10-2018 BEN78_01830 a84302903e7aa6e9c476eb57d462c7ad 470 PIRSF PIRSF000167 13 467 6.7E-160 T 13-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 BEN78_07360 6125802e8c74771d3c787edff35ea0a2 317 Hamap MF_01987 Ribokinase [rbsK]. 8 296 24.499 T 13-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 BEN78_07360 6125802e8c74771d3c787edff35ea0a2 317 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 241 254 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 BEN78_07360 6125802e8c74771d3c787edff35ea0a2 317 PRINTS PR00990 Ribokinase signature 39 58 8.7E-31 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 BEN78_07360 6125802e8c74771d3c787edff35ea0a2 317 PRINTS PR00990 Ribokinase signature 175 190 8.7E-31 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 BEN78_07360 6125802e8c74771d3c787edff35ea0a2 317 PRINTS PR00990 Ribokinase signature 212 223 8.7E-31 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 BEN78_07360 6125802e8c74771d3c787edff35ea0a2 317 PRINTS PR00990 Ribokinase signature 12 33 8.7E-31 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 BEN78_07360 6125802e8c74771d3c787edff35ea0a2 317 PRINTS PR00990 Ribokinase signature 111 124 8.7E-31 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 BEN78_07360 6125802e8c74771d3c787edff35ea0a2 317 SUPERFAMILY SSF53613 10 297 7.64E-69 T 13-10-2018 IPR029056 Ribokinase-like BEN78_07360 6125802e8c74771d3c787edff35ea0a2 317 Gene3D G3DSA:3.40.1190.20 2 302 3.2E-85 T 13-10-2018 IPR029056 Ribokinase-like BEN78_07360 6125802e8c74771d3c787edff35ea0a2 317 Pfam PF00294 pfkB family carbohydrate kinase 10 289 2.0E-52 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB BEN78_04080 008d7051a9b9a62ddda9c6133b7921c9 516 Gene3D G3DSA:1.20.150.20 386 516 7.1E-49 T 13-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_04080 008d7051a9b9a62ddda9c6133b7921c9 516 SUPERFAMILY SSF52540 99 384 1.63E-94 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_04080 008d7051a9b9a62ddda9c6133b7921c9 516 Gene3D G3DSA:2.40.30.20 4 96 2.2E-30 T 13-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BEN78_04080 008d7051a9b9a62ddda9c6133b7921c9 516 Gene3D G3DSA:3.40.50.300 97 385 1.7E-130 T 13-10-2018 BEN78_04080 008d7051a9b9a62ddda9c6133b7921c9 516 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 4 515 49.814 T 13-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_04080 008d7051a9b9a62ddda9c6133b7921c9 516 SUPERFAMILY SSF47917 386 513 1.1E-46 T 13-10-2018 BEN78_04080 008d7051a9b9a62ddda9c6133b7921c9 516 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 152 378 1.7E-72 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BEN78_04080 008d7051a9b9a62ddda9c6133b7921c9 516 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 369 378 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BEN78_04080 008d7051a9b9a62ddda9c6133b7921c9 516 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 95 4.4E-12 T 13-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BEN78_04080 008d7051a9b9a62ddda9c6133b7921c9 516 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 6 513 6.0E-248 T 13-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_04080 008d7051a9b9a62ddda9c6133b7921c9 516 SUPERFAMILY SSF50615 13 97 1.86E-26 T 13-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BEN78_04080 008d7051a9b9a62ddda9c6133b7921c9 516 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 385 510 2.2E-45 T 13-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_04045 75c8cf6fbd45e571a89e1908add7174d 3290 Gene3D G3DSA:3.30.1330.60 3191 3290 2.3E-17 T 13-10-2018 IPR036737 OmpA-like domain superfamily BEN78_04045 75c8cf6fbd45e571a89e1908add7174d 3290 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 2722 2772 8.5E-10 T 13-10-2018 IPR001434 Domain of unknown function DUF11 BEN78_04045 75c8cf6fbd45e571a89e1908add7174d 3290 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1737 1765 3.7E-7 T 13-10-2018 IPR001434 Domain of unknown function DUF11 BEN78_04045 75c8cf6fbd45e571a89e1908add7174d 3290 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 957 984 2.5E-6 T 13-10-2018 IPR001434 Domain of unknown function DUF11 BEN78_04045 75c8cf6fbd45e571a89e1908add7174d 3290 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 402 445 1.6E-14 T 13-10-2018 IPR001434 Domain of unknown function DUF11 BEN78_04045 75c8cf6fbd45e571a89e1908add7174d 3290 SUPERFAMILY SSF103088 3194 3287 9.29E-18 T 13-10-2018 IPR036737 OmpA-like domain superfamily BEN78_04045 75c8cf6fbd45e571a89e1908add7174d 3290 SUPERFAMILY SSF82171 591 781 9.02E-6 T 13-10-2018 BEN78_04045 75c8cf6fbd45e571a89e1908add7174d 3290 SUPERFAMILY SSF103088 3102 3162 1.96E-5 T 13-10-2018 IPR036737 OmpA-like domain superfamily BEN78_04045 75c8cf6fbd45e571a89e1908add7174d 3290 Pfam PF00691 OmpA family 3200 3283 4.1E-8 T 13-10-2018 IPR006665 OmpA-like domain BEN78_04045 75c8cf6fbd45e571a89e1908add7174d 3290 PRINTS PR01021 OMPA domain signature 3246 3262 9.2E-12 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BEN78_04045 75c8cf6fbd45e571a89e1908add7174d 3290 PRINTS PR01021 OMPA domain signature 3231 3246 9.2E-12 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BEN78_04045 75c8cf6fbd45e571a89e1908add7174d 3290 PRINTS PR01021 OMPA domain signature 3201 3223 9.2E-12 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BEN78_04045 75c8cf6fbd45e571a89e1908add7174d 3290 Pfam PF01345 Domain of unknown function DUF11 2720 2808 1.0E-11 T 13-10-2018 IPR001434 Domain of unknown function DUF11 BEN78_04045 75c8cf6fbd45e571a89e1908add7174d 3290 Pfam PF01345 Domain of unknown function DUF11 398 519 7.3E-16 T 13-10-2018 IPR001434 Domain of unknown function DUF11 BEN78_00260 3d21530dbae056c85235ac2e8468c254 92 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.485 T 13-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 BEN78_00260 3d21530dbae056c85235ac2e8468c254 92 SUPERFAMILY SSF50182 7 68 4.04E-24 T 13-10-2018 IPR010920 LSM domain superfamily BEN78_00260 3d21530dbae056c85235ac2e8468c254 92 Pfam PF17209 Hfq protein 7 68 6.9E-31 T 13-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 BEN78_00260 3d21530dbae056c85235ac2e8468c254 92 Gene3D G3DSA:2.30.30.100 1 70 8.6E-33 T 13-10-2018 BEN78_00260 3d21530dbae056c85235ac2e8468c254 92 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 9.6E-30 T 13-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 BEN78_12285 de4ef2dff31ebd3efe2ee2a937a67285 344 PIRSF PIRSF002756 1 343 1.6E-108 T 13-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 BEN78_12285 de4ef2dff31ebd3efe2ee2a937a67285 344 Pfam PF12849 PBP superfamily domain 24 313 4.0E-63 T 13-10-2018 IPR024370 PBP domain BEN78_12285 de4ef2dff31ebd3efe2ee2a937a67285 344 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 32 340 1.5E-124 T 13-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 BEN78_12285 de4ef2dff31ebd3efe2ee2a937a67285 344 SUPERFAMILY SSF53850 32 340 7.76E-101 T 13-10-2018 BEN78_12285 de4ef2dff31ebd3efe2ee2a937a67285 344 Gene3D G3DSA:3.40.190.10 106 282 5.3E-127 T 13-10-2018 BEN78_12285 de4ef2dff31ebd3efe2ee2a937a67285 344 Gene3D G3DSA:3.40.190.10 33 329 5.3E-127 T 13-10-2018 BEN78_06100 87c3691100ca50e5d7fb6e16acb4d488 299 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 281 1.5E-23 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BEN78_06100 87c3691100ca50e5d7fb6e16acb4d488 299 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 1.6E-14 T 13-10-2018 BEN78_06100 87c3691100ca50e5d7fb6e16acb4d488 299 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 250 272 1.6E-14 T 13-10-2018 BEN78_06100 87c3691100ca50e5d7fb6e16acb4d488 299 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 1.6E-14 T 13-10-2018 BEN78_06100 87c3691100ca50e5d7fb6e16acb4d488 299 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 1.6E-14 T 13-10-2018 BEN78_06100 87c3691100ca50e5d7fb6e16acb4d488 299 SUPERFAMILY SSF51905 1 290 8.84E-32 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_06100 87c3691100ca50e5d7fb6e16acb4d488 299 Gene3D G3DSA:3.50.50.60 120 226 2.6E-95 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_06100 87c3691100ca50e5d7fb6e16acb4d488 299 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 1.8E-9 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN78_06100 87c3691100ca50e5d7fb6e16acb4d488 299 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 1.8E-9 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN78_06100 87c3691100ca50e5d7fb6e16acb4d488 299 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 9 31 1.8E-9 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN78_06100 87c3691100ca50e5d7fb6e16acb4d488 299 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 1.8E-9 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN78_06100 87c3691100ca50e5d7fb6e16acb4d488 299 Gene3D G3DSA:3.50.50.60 8 291 2.6E-95 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_05185 c51472e29c7bebe0767fb34a87e7ba34 133 Pfam PF12870 Domain of unknown function (DUF4878) 21 130 5.6E-19 T 13-10-2018 IPR024267 Domain of unknown function (DUF4878) BEN78_05185 c51472e29c7bebe0767fb34a87e7ba34 133 Gene3D G3DSA:3.10.450.50 19 133 7.4E-25 T 13-10-2018 BEN78_05185 c51472e29c7bebe0767fb34a87e7ba34 133 SUPERFAMILY SSF54427 26 131 1.27E-6 T 13-10-2018 IPR032710 NTF2-like domain superfamily BEN78_11990 c70d9f2de330d59ff57dceb0194ed82f 348 SUPERFAMILY SSF52540 4 210 8.23E-36 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_11990 c70d9f2de330d59ff57dceb0194ed82f 348 Gene3D G3DSA:1.20.272.10 214 344 8.4E-23 T 13-10-2018 BEN78_11990 c70d9f2de330d59ff57dceb0194ed82f 348 Gene3D G3DSA:3.40.50.300 1 139 5.0E-37 T 13-10-2018 BEN78_11990 c70d9f2de330d59ff57dceb0194ed82f 348 SUPERFAMILY SSF48019 212 338 4.25E-21 T 13-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 BEN78_11990 c70d9f2de330d59ff57dceb0194ed82f 348 Gene3D G3DSA:1.10.8.60 144 212 1.4E-21 T 13-10-2018 BEN78_11990 c70d9f2de330d59ff57dceb0194ed82f 348 Pfam PF06144 DNA polymerase III, delta subunit 21 190 8.5E-18 T 13-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 BEN78_11990 c70d9f2de330d59ff57dceb0194ed82f 348 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 17 337 4.1E-85 T 13-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 BEN78_07155 0437c69a3fa5459c5e3a429e7cdc5bab 402 Gene3D G3DSA:3.40.640.10 62 292 4.6E-123 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN78_07155 0437c69a3fa5459c5e3a429e7cdc5bab 402 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 8 390 46.278 T 13-10-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 BEN78_07155 0437c69a3fa5459c5e3a429e7cdc5bab 402 Gene3D G3DSA:3.90.1150.10 46 383 4.6E-123 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN78_07155 0437c69a3fa5459c5e3a429e7cdc5bab 402 Pfam PF00155 Aminotransferase class I and II 47 386 8.2E-56 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BEN78_07155 0437c69a3fa5459c5e3a429e7cdc5bab 402 SUPERFAMILY SSF53383 10 391 1.71E-103 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_07155 0437c69a3fa5459c5e3a429e7cdc5bab 402 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 25 386 5.5E-140 T 13-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 BEN78_03630 43cc8509a82f2b3552e6e8c8d4fbbaa2 307 Pfam PF00491 Arginase family 8 299 8.4E-78 T 13-10-2018 IPR006035 Ureohydrolase GO:0046872 BEN78_03630 43cc8509a82f2b3552e6e8c8d4fbbaa2 307 Gene3D G3DSA:3.40.800.10 7 304 3.8E-93 T 13-10-2018 BEN78_03630 43cc8509a82f2b3552e6e8c8d4fbbaa2 307 ProSitePatterns PS01053 Arginase family signature. 229 250 - T 13-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 BEN78_03630 43cc8509a82f2b3552e6e8c8d4fbbaa2 307 TIGRFAM TIGR01229 rocF_arginase: arginase 9 303 8.7E-87 T 13-10-2018 IPR014033 Arginase GO:0004053|GO:0006525|GO:0046872 KEGG: 00220+3.5.3.1|KEGG: 00330+3.5.3.1|MetaCyc: PWY-31|MetaCyc: PWY-4984|MetaCyc: PWY-6305|MetaCyc: PWY-6922|Reactome: R-HSA-70635 BEN78_03630 43cc8509a82f2b3552e6e8c8d4fbbaa2 307 PRINTS PR00116 Arginase signature 226 255 9.0E-46 T 13-10-2018 IPR006035 Ureohydrolase GO:0046872 BEN78_03630 43cc8509a82f2b3552e6e8c8d4fbbaa2 307 PRINTS PR00116 Arginase signature 261 275 9.0E-46 T 13-10-2018 IPR006035 Ureohydrolase GO:0046872 BEN78_03630 43cc8509a82f2b3552e6e8c8d4fbbaa2 307 PRINTS PR00116 Arginase signature 178 196 9.0E-46 T 13-10-2018 IPR006035 Ureohydrolase GO:0046872 BEN78_03630 43cc8509a82f2b3552e6e8c8d4fbbaa2 307 PRINTS PR00116 Arginase signature 124 151 9.0E-46 T 13-10-2018 IPR006035 Ureohydrolase GO:0046872 BEN78_03630 43cc8509a82f2b3552e6e8c8d4fbbaa2 307 PRINTS PR00116 Arginase signature 97 112 9.0E-46 T 13-10-2018 IPR006035 Ureohydrolase GO:0046872 BEN78_03630 43cc8509a82f2b3552e6e8c8d4fbbaa2 307 SUPERFAMILY SSF52768 8 302 9.89E-89 T 13-10-2018 IPR023696 Ureohydrolase domain superfamily BEN78_03630 43cc8509a82f2b3552e6e8c8d4fbbaa2 307 PIRSF PIRSF036979 166 303 9.6E-25 T 13-10-2018 IPR006035 Ureohydrolase GO:0046872 BEN78_03630 43cc8509a82f2b3552e6e8c8d4fbbaa2 307 PIRSF PIRSF036979 2 155 2.6E-11 T 13-10-2018 IPR006035 Ureohydrolase GO:0046872 BEN78_01030 17534b20da47787bb3c69c60c03cc4f0 95 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 21 62 3.0E-4 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 BEN78_01030 17534b20da47787bb3c69c60c03cc4f0 95 PIRSF PIRSF006488 8 92 7.6E-24 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 BEN78_01030 17534b20da47787bb3c69c60c03cc4f0 95 SUPERFAMILY SSF116842 19 78 1.83E-18 T 13-10-2018 BEN78_01030 17534b20da47787bb3c69c60c03cc4f0 95 Pfam PF02609 Exonuclease VII small subunit 21 71 1.0E-19 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 BEN78_01030 17534b20da47787bb3c69c60c03cc4f0 95 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 20 80 15.61 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 BEN78_01030 17534b20da47787bb3c69c60c03cc4f0 95 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 20 73 2.2E-21 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 BEN78_01030 17534b20da47787bb3c69c60c03cc4f0 95 Gene3D G3DSA:1.10.287.1040 15 92 1.2E-23 T 13-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 BEN78_00470 32cdfdc9dd2c40910b59604dfc5776ce 201 Gene3D G3DSA:1.10.3210.10 15 199 4.3E-62 T 13-10-2018 BEN78_00470 32cdfdc9dd2c40910b59604dfc5776ce 201 Pfam PF01966 HD domain 35 157 1.4E-15 T 13-10-2018 IPR006674 HD domain BEN78_00470 32cdfdc9dd2c40910b59604dfc5776ce 201 SMART SM00471 29 166 3.1E-9 T 13-10-2018 IPR003607 HD/PDEase domain BEN78_00470 32cdfdc9dd2c40910b59604dfc5776ce 201 SUPERFAMILY SSF109604 23 196 2.64E-33 T 13-10-2018 BEN78_14635 cbf1d4645e82a554bf76096eea73e71c 221 Pfam PF13861 FlgD Tudor-like domain 84 214 1.4E-12 T 13-10-2018 IPR025963 FlgD Tudor-like domain BEN78_14635 cbf1d4645e82a554bf76096eea73e71c 221 Pfam PF03963 Flagellar hook capping protein - N-terminal region 16 74 2.7E-22 T 13-10-2018 IPR005648 Flagellar hook capping protein BEN78_14635 cbf1d4645e82a554bf76096eea73e71c 221 Gene3D G3DSA:2.30.30.910 184 221 2.6E-13 T 13-10-2018 BEN78_14635 cbf1d4645e82a554bf76096eea73e71c 221 Pfam PF13860 FlgD Ig-like domain 109 173 4.5E-17 T 13-10-2018 IPR025965 FlgD Ig-like domain BEN78_14635 cbf1d4645e82a554bf76096eea73e71c 221 Gene3D G3DSA:2.60.40.4070 101 183 1.1E-24 T 13-10-2018 BEN78_08160 2b1b56959ab3b190b35526e73c99826a 212 Pfam PF00691 OmpA family 92 195 9.9E-18 T 13-10-2018 IPR006665 OmpA-like domain BEN78_08160 2b1b56959ab3b190b35526e73c99826a 212 SUPERFAMILY SSF103088 82 199 4.84E-26 T 13-10-2018 IPR036737 OmpA-like domain superfamily BEN78_08160 2b1b56959ab3b190b35526e73c99826a 212 Gene3D G3DSA:3.30.1330.60 43 208 3.4E-36 T 13-10-2018 IPR036737 OmpA-like domain superfamily BEN78_11725 c83b91f377585061ffd80257ef946089 172 Pfam PF13671 AAA domain 2 117 1.6E-12 T 13-10-2018 BEN78_11725 c83b91f377585061ffd80257ef946089 172 Gene3D G3DSA:3.40.50.300 1 168 5.2E-29 T 13-10-2018 BEN78_11725 c83b91f377585061ffd80257ef946089 172 SUPERFAMILY SSF52540 1 167 1.12E-17 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_08415 39db7a61734875bcaeeb4be339607f01 489 SUPERFAMILY SSF63829 87 271 2.13E-6 T 13-10-2018 BEN78_08415 39db7a61734875bcaeeb4be339607f01 489 Pfam PF07494 Two component regulator propeller 243 265 0.012 T 13-10-2018 IPR011110 Two component regulator propeller BEN78_08415 39db7a61734875bcaeeb4be339607f01 489 Gene3D G3DSA:2.130.10.10 40 328 1.3E-30 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BEN78_09560 6c662851092fa6ce3e6d560b2faf1f0e 448 Pfam PF01098 Cell cycle protein 33 386 1.3E-96 T 13-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN78_09560 6c662851092fa6ce3e6d560b2faf1f0e 448 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 29 386 9.2E-123 T 13-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN78_09560 6c662851092fa6ce3e6d560b2faf1f0e 448 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 27 397 37.026 T 13-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN78_10635 d8b82a72500f988b68fd22e8bddc9a40 186 SUPERFAMILY SSF101874 27 184 4.45E-35 T 13-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily BEN78_10635 d8b82a72500f988b68fd22e8bddc9a40 186 Pfam PF04264 YceI-like domain 27 179 4.2E-25 T 13-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like BEN78_10635 d8b82a72500f988b68fd22e8bddc9a40 186 SMART SM00867 25 183 6.4E-38 T 13-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like BEN78_10635 d8b82a72500f988b68fd22e8bddc9a40 186 Gene3D G3DSA:2.40.128.110 26 183 1.6E-30 T 13-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily BEN78_07660 0d04433c221c8269b329364f2f2bbf16 264 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 6 235 1.0E-45 T 13-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 BEN78_07660 0d04433c221c8269b329364f2f2bbf16 264 SUPERFAMILY SSF53213 4 259 1.01E-87 T 13-10-2018 BEN78_07660 0d04433c221c8269b329364f2f2bbf16 264 Gene3D G3DSA:3.40.830.10 1 259 6.1E-86 T 13-10-2018 BEN78_07660 0d04433c221c8269b329364f2f2bbf16 264 PIRSF PIRSF006157 1 260 4.2E-86 T 13-10-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 BEN78_04920 ca89893084a241d4f680dea0f612d0f6 1156 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 896 1004 2.8E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_04920 ca89893084a241d4f680dea0f612d0f6 1156 SMART SM00387 895 1006 2.9E-26 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_04920 ca89893084a241d4f680dea0f612d0f6 1156 Gene3D G3DSA:3.40.50.2300 1020 1154 3.8E-16 T 13-10-2018 BEN78_04920 ca89893084a241d4f680dea0f612d0f6 1156 Gene3D G3DSA:1.20.1730.10 38 468 4.5E-15 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily BEN78_04920 ca89893084a241d4f680dea0f612d0f6 1156 Gene3D G3DSA:3.30.450.20 624 761 1.1E-13 T 13-10-2018 BEN78_04920 ca89893084a241d4f680dea0f612d0f6 1156 Gene3D G3DSA:1.10.287.130 773 853 9.1E-14 T 13-10-2018 BEN78_04920 ca89893084a241d4f680dea0f612d0f6 1156 SUPERFAMILY SSF52172 1025 1143 3.7E-17 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_04920 ca89893084a241d4f680dea0f612d0f6 1156 Pfam PF12860 PAS fold 643 760 6.0E-39 T 13-10-2018 BEN78_04920 ca89893084a241d4f680dea0f612d0f6 1156 Gene3D G3DSA:3.30.565.10 856 1011 2.7E-34 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_04920 ca89893084a241d4f680dea0f612d0f6 1156 Pfam PF00512 His Kinase A (phospho-acceptor) domain 786 851 6.9E-11 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_04920 ca89893084a241d4f680dea0f612d0f6 1156 Pfam PF00072 Response regulator receiver domain 1029 1135 1.7E-10 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_04920 ca89893084a241d4f680dea0f612d0f6 1156 SMART SM00388 786 851 7.7E-16 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_04920 ca89893084a241d4f680dea0f612d0f6 1156 SUPERFAMILY SSF55785 628 692 1.95E-8 T 13-10-2018 IPR035965 PAS domain superfamily BEN78_04920 ca89893084a241d4f680dea0f612d0f6 1156 SMART SM00448 1027 1137 4.2E-12 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_04920 ca89893084a241d4f680dea0f612d0f6 1156 PRINTS PR00344 Bacterial sensor protein C-terminal signature 931 945 8.5E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_04920 ca89893084a241d4f680dea0f612d0f6 1156 PRINTS PR00344 Bacterial sensor protein C-terminal signature 966 984 8.5E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_04920 ca89893084a241d4f680dea0f612d0f6 1156 PRINTS PR00344 Bacterial sensor protein C-terminal signature 990 1003 8.5E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_04920 ca89893084a241d4f680dea0f612d0f6 1156 SUPERFAMILY SSF47384 770 851 2.55E-14 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN78_04920 ca89893084a241d4f680dea0f612d0f6 1156 SMART SM00091 637 703 0.0013 T 13-10-2018 IPR000014 PAS domain BEN78_04920 ca89893084a241d4f680dea0f612d0f6 1156 SUPERFAMILY SSF55874 841 1004 4.06E-39 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_16615 80ddb5bf632618402c5ba2d5a065a3fa 360 SUPERFAMILY SSF53383 24 355 3.48E-71 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_16615 80ddb5bf632618402c5ba2d5a065a3fa 360 Gene3D G3DSA:3.90.1150.10 7 349 6.7E-115 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN78_16615 80ddb5bf632618402c5ba2d5a065a3fa 360 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 9 355 1.2E-101 T 13-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 BEN78_16615 80ddb5bf632618402c5ba2d5a065a3fa 360 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 7 357 53.375 T 13-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 BEN78_16615 80ddb5bf632618402c5ba2d5a065a3fa 360 Gene3D G3DSA:3.40.640.10 51 260 6.7E-115 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN78_16615 80ddb5bf632618402c5ba2d5a065a3fa 360 Pfam PF00155 Aminotransferase class I and II 45 353 3.1E-52 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BEN78_10590 6785365476dcea95b1716aa6d0e9ba32 291 Pfam PF01551 Peptidase family M23 163 264 1.9E-22 T 13-10-2018 IPR016047 Peptidase M23 BEN78_10590 6785365476dcea95b1716aa6d0e9ba32 291 SUPERFAMILY SSF51261 141 265 8.89E-28 T 13-10-2018 IPR011055 Duplicated hybrid motif BEN78_10590 6785365476dcea95b1716aa6d0e9ba32 291 Gene3D G3DSA:2.70.70.10 125 276 9.5E-34 T 13-10-2018 IPR011055 Duplicated hybrid motif BEN78_13890 4aab7e9db03455043be3ef6f4921e49f 167 Gene3D G3DSA:2.40.320.10 1 157 8.5E-44 T 13-10-2018 BEN78_13890 4aab7e9db03455043be3ef6f4921e49f 167 SMART SM01118 2 155 2.4E-25 T 13-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 BEN78_13890 4aab7e9db03455043be3ef6f4921e49f 167 Pfam PF01928 CYTH domain 4 147 3.9E-15 T 13-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 BEN78_13890 4aab7e9db03455043be3ef6f4921e49f 167 SUPERFAMILY SSF55154 1 155 1.96E-39 T 13-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 BEN78_13890 4aab7e9db03455043be3ef6f4921e49f 167 PIRSF PIRSF016487 1 165 5.1E-59 T 13-10-2018 IPR012042 Inorganic triphosphatase NeuTTM/CthTTM-like BEN78_08605 aeb9fb5f3204fb18df4fad8847bbcd03 553 Pfam PF00083 Sugar (and other) transporter 23 236 6.8E-27 T 13-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 BEN78_08605 aeb9fb5f3204fb18df4fad8847bbcd03 553 SUPERFAMILY SSF103473 18 549 1.13E-58 T 13-10-2018 IPR036259 MFS transporter superfamily BEN78_08605 aeb9fb5f3204fb18df4fad8847bbcd03 553 Gene3D G3DSA:1.20.1250.20 18 355 2.1E-53 T 13-10-2018 BEN78_08605 aeb9fb5f3204fb18df4fad8847bbcd03 553 Gene3D G3DSA:1.20.1250.20 431 553 3.0E-9 T 13-10-2018 BEN78_11190 177c8ba7240799a5ade569ed0cdb0fe8 118 Gene3D G3DSA:4.10.910.10 72 118 1.0E-24 T 13-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11190 177c8ba7240799a5ade569ed0cdb0fe8 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 13-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11190 177c8ba7240799a5ade569ed0cdb0fe8 118 PIRSF PIRSF002134 1 118 7.6E-42 T 13-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11190 177c8ba7240799a5ade569ed0cdb0fe8 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 26.569 T 13-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11190 177c8ba7240799a5ade569ed0cdb0fe8 118 SUPERFAMILY SSF46946 2 114 1.62E-43 T 13-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 BEN78_11190 177c8ba7240799a5ade569ed0cdb0fe8 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 5.4E-31 T 13-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11190 177c8ba7240799a5ade569ed0cdb0fe8 118 Gene3D G3DSA:1.10.8.50 1 71 1.2E-27 T 13-10-2018 BEN78_11190 177c8ba7240799a5ade569ed0cdb0fe8 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 4.8E-51 T 13-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_12060 530b398d989fe28e60998922dff27d31 107 Pfam PF00037 4Fe-4S binding domain 34 56 6.8E-7 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BEN78_12060 530b398d989fe28e60998922dff27d31 107 SUPERFAMILY SSF54862 1 93 5.68E-24 T 13-10-2018 BEN78_12060 530b398d989fe28e60998922dff27d31 107 Pfam PF11953 Domain of unknown function (DUF3470) 66 107 9.4E-21 T 13-10-2018 IPR022569 Ferredoxin, C-terminal BEN78_12060 530b398d989fe28e60998922dff27d31 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BEN78_12060 530b398d989fe28e60998922dff27d31 107 Gene3D G3DSA:3.30.70.20 2 94 3.6E-31 T 13-10-2018 BEN78_12060 530b398d989fe28e60998922dff27d31 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 2.0E-17 T 13-10-2018 IPR000813 7Fe ferredoxin GO:0009055 BEN78_12060 530b398d989fe28e60998922dff27d31 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 2.0E-17 T 13-10-2018 IPR000813 7Fe ferredoxin GO:0009055 BEN78_12060 530b398d989fe28e60998922dff27d31 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 2.0E-17 T 13-10-2018 IPR000813 7Fe ferredoxin GO:0009055 BEN78_09115 9ae57195956e7fe895aac67ccadf6ec4 159 PIRSF PIRSF019307 1 159 2.2E-56 T 13-10-2018 IPR014500 Uncharacterised conserved protein UCP019307, cupin-type BEN78_09115 9ae57195956e7fe895aac67ccadf6ec4 159 SUPERFAMILY SSF51182 32 134 2.67E-17 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily BEN78_09115 9ae57195956e7fe895aac67ccadf6ec4 159 Gene3D G3DSA:2.60.120.10 22 141 5.1E-8 T 13-10-2018 IPR014710 RmlC-like jelly roll fold BEN78_07695 96c704b9ca6255a2375eaa06f335a600 271 Gene3D G3DSA:2.30.110.10 7 167 2.0E-47 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 BEN78_07695 96c704b9ca6255a2375eaa06f335a600 271 SUPERFAMILY SSF50475 11 139 2.24E-31 T 13-10-2018 BEN78_07695 96c704b9ca6255a2375eaa06f335a600 271 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 10 156 5.4E-44 T 13-10-2018 IPR038725 General stress protein, FMN-binding split barrel domain BEN78_11730 69a7d91ed0d14a2960281849ffb392c6 722 Gene3D G3DSA:2.40.170.20 187 721 1.1E-79 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_11730 69a7d91ed0d14a2960281849ffb392c6 722 Pfam PF07715 TonB-dependent Receptor Plug Domain 72 169 1.2E-11 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_11730 69a7d91ed0d14a2960281849ffb392c6 722 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 75 720 1.9E-106 T 13-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 BEN78_11730 69a7d91ed0d14a2960281849ffb392c6 722 Pfam PF00593 TonB dependent receptor 257 719 1.5E-43 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_11730 69a7d91ed0d14a2960281849ffb392c6 722 SUPERFAMILY SSF56935 26 720 2.48E-102 T 13-10-2018 BEN78_11730 69a7d91ed0d14a2960281849ffb392c6 722 Gene3D G3DSA:2.170.130.10 68 186 1.4E-16 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_02040 bc29377d8b42b60fb2f3caa964055640 677 Gene3D G3DSA:2.70.98.10 27 270 4.3E-80 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 BEN78_02040 bc29377d8b42b60fb2f3caa964055640 677 Pfam PF14508 Glycosyl-hydrolase 97 N-terminal 29 277 3.3E-70 T 13-10-2018 IPR029486 Glycosyl-hydrolase 97, N-terminal domain BEN78_02040 bc29377d8b42b60fb2f3caa964055640 677 Pfam PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation 574 674 1.1E-29 T 13-10-2018 IPR029483 Glycosyl-hydrolase 97, C-terminal oligomerisation domain BEN78_02040 bc29377d8b42b60fb2f3caa964055640 677 Pfam PF10566 Glycoside hydrolase 97 282 572 5.4E-114 T 13-10-2018 IPR019563 Glycosyl-hydrolase 97, catalytic domain BEN78_02040 bc29377d8b42b60fb2f3caa964055640 677 Gene3D G3DSA:3.20.20.70 274 677 2.8E-163 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_14985 b76336b47a6c4804056fc0b2ce26e112 445 Gene3D G3DSA:3.30.559.10 204 442 1.1E-78 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BEN78_14985 b76336b47a6c4804056fc0b2ce26e112 445 SUPERFAMILY SSF52777 211 443 3.56E-74 T 13-10-2018 BEN78_14985 b76336b47a6c4804056fc0b2ce26e112 445 Pfam PF00364 Biotin-requiring enzyme 5 77 1.1E-17 T 13-10-2018 IPR000089 Biotin/lipoyl attachment BEN78_14985 b76336b47a6c4804056fc0b2ce26e112 445 SUPERFAMILY SSF47005 150 193 3.01E-10 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 BEN78_14985 b76336b47a6c4804056fc0b2ce26e112 445 Gene3D G3DSA:4.10.320.10 150 196 9.4E-14 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 BEN78_14985 b76336b47a6c4804056fc0b2ce26e112 445 Pfam PF02817 e3 binding domain 154 188 2.3E-11 T 13-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 BEN78_14985 b76336b47a6c4804056fc0b2ce26e112 445 SUPERFAMILY SSF51230 2 97 1.19E-23 T 13-10-2018 IPR011053 Single hybrid motif BEN78_14985 b76336b47a6c4804056fc0b2ce26e112 445 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 216 443 1.3E-76 T 13-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 BEN78_14985 b76336b47a6c4804056fc0b2ce26e112 445 Gene3D G3DSA:2.40.50.100 1 103 3.1E-19 T 13-10-2018 BEN78_12995 ab035e163fade496f1dc7805b3ac7cc0 329 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 22 319 2.6E-94 T 13-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 BEN78_12995 ab035e163fade496f1dc7805b3ac7cc0 329 SUPERFAMILY SSF52540 44 164 1.49E-10 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_12995 ab035e163fade496f1dc7805b3ac7cc0 329 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 27 319 2.8E-63 T 13-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 BEN78_12995 ab035e163fade496f1dc7805b3ac7cc0 329 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 2 324 35.765 T 13-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 BEN78_15365 8e1548d5f3735db100b07d0cf07b7d1c 181 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 62 170 2.2E-39 T 13-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 BEN78_15365 8e1548d5f3735db100b07d0cf07b7d1c 181 SUPERFAMILY SSF109635 48 140 3.53E-30 T 13-10-2018 IPR037187 DksA, N-terminal domain superfamily BEN78_15365 8e1548d5f3735db100b07d0cf07b7d1c 181 Gene3D G3DSA:1.20.120.910 52 180 1.1E-29 T 13-10-2018 BEN78_15365 8e1548d5f3735db100b07d0cf07b7d1c 181 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 58 180 26.988 T 13-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 BEN78_16490 52249ef23d25ff7c49f5a4c48ef3036a 107 Pfam PF11196 Protein of unknown function (DUF2834) 4 98 7.5E-27 T 13-10-2018 IPR021362 Protein of unknown function DUF2834 BEN78_12895 c3038d7a08597b2578a4a8c618f8609a 250 Gene3D G3DSA:3.40.630.30 70 249 6.9E-5 T 13-10-2018 BEN78_12895 c3038d7a08597b2578a4a8c618f8609a 250 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 26 96 1.9E-15 T 13-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 BEN78_12895 c3038d7a08597b2578a4a8c618f8609a 250 SUPERFAMILY SSF55729 91 242 1.23E-26 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN78_12895 c3038d7a08597b2578a4a8c618f8609a 250 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 116 236 7.7E-37 T 13-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 BEN78_12895 c3038d7a08597b2578a4a8c618f8609a 250 PIRSF PIRSF037208 11 250 3.1E-87 T 13-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 BEN78_12895 c3038d7a08597b2578a4a8c618f8609a 250 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 16 243 39.252 T 13-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 BEN78_15475 737e75e92d3f6baa58120243d32644fe 376 SMART SM00474 6 177 9.1E-32 T 13-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 BEN78_15475 737e75e92d3f6baa58120243d32644fe 376 SUPERFAMILY SSF47819 306 366 1.8E-10 T 13-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 BEN78_15475 737e75e92d3f6baa58120243d32644fe 376 SUPERFAMILY SSF47819 204 290 1.28E-11 T 13-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 BEN78_15475 737e75e92d3f6baa58120243d32644fe 376 Gene3D G3DSA:3.30.420.10 7 198 1.2E-54 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BEN78_15475 737e75e92d3f6baa58120243d32644fe 376 SUPERFAMILY SSF53098 4 194 1.41E-52 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily BEN78_15475 737e75e92d3f6baa58120243d32644fe 376 Gene3D G3DSA:1.10.150.80 202 298 4.5E-9 T 13-10-2018 BEN78_15475 737e75e92d3f6baa58120243d32644fe 376 Pfam PF01612 3'-5' exonuclease 13 176 3.8E-28 T 13-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 BEN78_15475 737e75e92d3f6baa58120243d32644fe 376 TIGRFAM TIGR01388 rnd: ribonuclease D 8 365 2.1E-103 T 13-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 BEN78_02405 3a26f08983e6bc409552f67e3f81b717 274 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 4 273 6.2E-100 T 13-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 BEN78_02405 3a26f08983e6bc409552f67e3f81b717 274 SUPERFAMILY SSF51730 3 273 5.3E-90 T 13-10-2018 IPR029041 FAD-linked oxidoreductase-like BEN78_02405 3a26f08983e6bc409552f67e3f81b717 274 Gene3D G3DSA:3.20.20.220 1 274 4.3E-98 T 13-10-2018 BEN78_02405 3a26f08983e6bc409552f67e3f81b717 274 Pfam PF02219 Methylenetetrahydrofolate reductase 4 273 6.4E-87 T 13-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 BEN78_05065 66d7d74e18596cfe655f7e937033c484 124 Pfam PF04214 Protein of unknown function, DUF 26 94 1.7E-34 T 13-10-2018 IPR007332 Protein of unknown function DUF411 BEN78_15155 9cb47f6b8470815463e88dd583b7143f 146 SUPERFAMILY SSF46785 4 135 4.0E-29 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_15155 9cb47f6b8470815463e88dd583b7143f 146 Gene3D G3DSA:1.10.10.10 2 141 1.3E-35 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_15155 9cb47f6b8470815463e88dd583b7143f 146 Pfam PF02082 Transcriptional regulator 4 81 3.0E-20 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type BEN78_03765 8a4d5f1d54b9bc3d415a8cb22d07da79 534 PIRSF PIRSF000414 8 534 1.4E-214 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BEN78_03765 8a4d5f1d54b9bc3d415a8cb22d07da79 534 SUPERFAMILY SSF53927 226 534 9.43E-128 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 BEN78_03765 8a4d5f1d54b9bc3d415a8cb22d07da79 534 Gene3D G3DSA:3.40.140.20 398 534 2.3E-59 T 13-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BEN78_03765 8a4d5f1d54b9bc3d415a8cb22d07da79 534 SMART SM00798 143 466 1.0E-187 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BEN78_03765 8a4d5f1d54b9bc3d415a8cb22d07da79 534 Gene3D G3DSA:3.40.50.1380 5 207 8.8E-79 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily BEN78_03765 8a4d5f1d54b9bc3d415a8cb22d07da79 534 SUPERFAMILY SSF52335 13 202 4.19E-65 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily BEN78_03765 8a4d5f1d54b9bc3d415a8cb22d07da79 534 Pfam PF01808 AICARFT/IMPCHase bienzyme 143 465 3.0E-113 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BEN78_03765 8a4d5f1d54b9bc3d415a8cb22d07da79 534 Gene3D G3DSA:3.40.140.20 224 379 2.3E-57 T 13-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BEN78_03765 8a4d5f1d54b9bc3d415a8cb22d07da79 534 Pfam PF02142 MGS-like domain 25 137 4.4E-23 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain BEN78_03765 8a4d5f1d54b9bc3d415a8cb22d07da79 534 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 13 534 43.916 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BEN78_03765 8a4d5f1d54b9bc3d415a8cb22d07da79 534 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 14 534 9.6E-218 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BEN78_03765 8a4d5f1d54b9bc3d415a8cb22d07da79 534 SMART SM00851 25 138 7.4E-53 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain BEN78_02770 08100bbcc4f6eaf209a6268cb94a45d3 294 Pfam PF01136 Peptidase family U32 82 266 9.0E-9 T 13-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 BEN78_06715 ebd4c161ba94e037a5218917912e5e16 481 Gene3D G3DSA:3.40.50.2300 3 129 5.4E-32 T 13-10-2018 BEN78_06715 ebd4c161ba94e037a5218917912e5e16 481 SMART SM00448 6 118 1.4E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_06715 ebd4c161ba94e037a5218917912e5e16 481 Gene3D G3DSA:3.40.50.300 140 318 2.5E-62 T 13-10-2018 BEN78_06715 ebd4c161ba94e037a5218917912e5e16 481 Pfam PF00072 Response regulator receiver domain 8 115 1.6E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_06715 ebd4c161ba94e037a5218917912e5e16 481 Pfam PF02954 Bacterial regulatory protein, Fis family 437 474 1.8E-10 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BEN78_06715 ebd4c161ba94e037a5218917912e5e16 481 SMART SM00382 168 311 2.5E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_06715 ebd4c161ba94e037a5218917912e5e16 481 SUPERFAMILY SSF52172 6 192 1.29E-36 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_06715 ebd4c161ba94e037a5218917912e5e16 481 Pfam PF00158 Sigma-54 interaction domain 148 314 7.4E-67 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BEN78_06715 ebd4c161ba94e037a5218917912e5e16 481 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 361 370 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site BEN78_06715 ebd4c161ba94e037a5218917912e5e16 481 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 8 475 6.8E-200 T 13-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 BEN78_06715 ebd4c161ba94e037a5218917912e5e16 481 SUPERFAMILY SSF46689 410 475 2.8E-14 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN78_06715 ebd4c161ba94e037a5218917912e5e16 481 Gene3D G3DSA:1.10.8.60 319 395 1.8E-21 T 13-10-2018 BEN78_06715 ebd4c161ba94e037a5218917912e5e16 481 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 172 185 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BEN78_06715 ebd4c161ba94e037a5218917912e5e16 481 Gene3D G3DSA:1.10.10.60 396 478 1.8E-16 T 13-10-2018 BEN78_06715 ebd4c161ba94e037a5218917912e5e16 481 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 234 249 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BEN78_06715 ebd4c161ba94e037a5218917912e5e16 481 SUPERFAMILY SSF52540 148 390 1.71E-72 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_06715 ebd4c161ba94e037a5218917912e5e16 481 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 460 480 1.8E-6 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BEN78_06715 ebd4c161ba94e037a5218917912e5e16 481 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 443 460 1.8E-6 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BEN78_06185 852bdbef37d043e25ef4ddda4ee370e7 112 Gene3D G3DSA:3.30.70.120 1 112 3.1E-44 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BEN78_06185 852bdbef37d043e25ef4ddda4ee370e7 112 SMART SM00938 4 105 1.1E-62 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BEN78_06185 852bdbef37d043e25ef4ddda4ee370e7 112 PRINTS PR00340 P-II protein signature 23 41 3.0E-42 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BEN78_06185 852bdbef37d043e25ef4ddda4ee370e7 112 PRINTS PR00340 P-II protein signature 52 75 3.0E-42 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BEN78_06185 852bdbef37d043e25ef4ddda4ee370e7 112 PRINTS PR00340 P-II protein signature 83 103 3.0E-42 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BEN78_06185 852bdbef37d043e25ef4ddda4ee370e7 112 PRINTS PR00340 P-II protein signature 2 17 3.0E-42 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BEN78_06185 852bdbef37d043e25ef4ddda4ee370e7 112 SUPERFAMILY SSF54913 1 112 1.75E-44 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta BEN78_06185 852bdbef37d043e25ef4ddda4ee370e7 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 13-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 BEN78_06185 852bdbef37d043e25ef4ddda4ee370e7 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 4.0E-41 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BEN78_06185 852bdbef37d043e25ef4ddda4ee370e7 112 PIRSF PIRSF039144 1 112 8.5E-53 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BEN78_01420 449dd3027776ca24a83177897bde8c49 279 Gene3D G3DSA:2.70.98.10 20 279 1.0E-48 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 BEN78_01420 449dd3027776ca24a83177897bde8c49 279 Pfam PF01263 Aldose 1-epimerase 24 207 5.9E-19 T 13-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 BEN78_01420 449dd3027776ca24a83177897bde8c49 279 SUPERFAMILY SSF74650 20 277 8.79E-40 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 BEN78_14470 f10f8d4133e746f45f015f72ce9025aa 379 SUPERFAMILY SSF160544 245 352 2.49E-38 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal BEN78_14470 f10f8d4133e746f45f015f72ce9025aa 379 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 8 354 8.5E-126 T 13-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 BEN78_14470 f10f8d4133e746f45f015f72ce9025aa 379 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 348 1.2E-119 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BEN78_14470 f10f8d4133e746f45f015f72ce9025aa 379 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 11 33 3.3E-37 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BEN78_14470 f10f8d4133e746f45f015f72ce9025aa 379 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 229 246 3.3E-37 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BEN78_14470 f10f8d4133e746f45f015f72ce9025aa 379 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 273 288 3.3E-37 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BEN78_14470 f10f8d4133e746f45f015f72ce9025aa 379 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 303 324 3.3E-37 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BEN78_14470 f10f8d4133e746f45f015f72ce9025aa 379 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 209 227 3.3E-37 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BEN78_14470 f10f8d4133e746f45f015f72ce9025aa 379 Gene3D G3DSA:3.40.1690.10 219 356 1.4E-53 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal BEN78_14980 c39a03103c847d5d125b26922cde9839 347 Gene3D G3DSA:3.40.50.920 214 347 2.1E-56 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BEN78_14980 c39a03103c847d5d125b26922cde9839 347 SUPERFAMILY SSF52518 12 229 3.69E-70 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold BEN78_14980 c39a03103c847d5d125b26922cde9839 347 SMART SM00861 14 189 2.6E-71 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BEN78_14980 c39a03103c847d5d125b26922cde9839 347 SUPERFAMILY SSF52922 215 345 1.09E-42 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BEN78_14980 c39a03103c847d5d125b26922cde9839 347 Pfam PF02779 Transketolase, pyrimidine binding domain 13 188 8.4E-48 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BEN78_14980 c39a03103c847d5d125b26922cde9839 347 Gene3D G3DSA:3.40.50.970 11 213 3.1E-93 T 13-10-2018 BEN78_14980 c39a03103c847d5d125b26922cde9839 347 Pfam PF02780 Transketolase, C-terminal domain 221 337 1.2E-35 T 13-10-2018 IPR033248 Transketolase, C-terminal domain BEN78_08835 7e50feb6d717e9139e4705e9b7101143 253 SUPERFAMILY SSF53335 22 246 2.79E-42 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_08835 7e50feb6d717e9139e4705e9b7101143 253 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 38 53 - T 13-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 BEN78_08835 7e50feb6d717e9139e4705e9b7101143 253 Gene3D G3DSA:3.40.50.150 33 253 9.7E-71 T 13-10-2018 BEN78_08835 7e50feb6d717e9139e4705e9b7101143 253 Pfam PF01209 ubiE/COQ5 methyltransferase family 23 252 2.0E-87 T 13-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 BEN78_08835 7e50feb6d717e9139e4705e9b7101143 253 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 27 252 2.6E-80 T 13-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 BEN78_08835 7e50feb6d717e9139e4705e9b7101143 253 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 160 174 - T 13-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 BEN78_08835 7e50feb6d717e9139e4705e9b7101143 253 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 18 252 37.087 T 13-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 BEN78_03675 6665b590dbc47c387bfa4a83ff1bbb6d 481 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 369 479 8.5E-15 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_03675 6665b590dbc47c387bfa4a83ff1bbb6d 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 458 1.2E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_03675 6665b590dbc47c387bfa4a83ff1bbb6d 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 465 478 1.2E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_03675 6665b590dbc47c387bfa4a83ff1bbb6d 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 423 1.2E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_03675 6665b590dbc47c387bfa4a83ff1bbb6d 481 Gene3D G3DSA:1.10.287.130 218 323 4.8E-11 T 13-10-2018 BEN78_03675 6665b590dbc47c387bfa4a83ff1bbb6d 481 SUPERFAMILY SSF55874 316 478 7.47E-27 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_03675 6665b590dbc47c387bfa4a83ff1bbb6d 481 Gene3D G3DSA:3.30.565.10 327 479 5.9E-29 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_03675 6665b590dbc47c387bfa4a83ff1bbb6d 481 SMART SM00387 368 481 1.2E-26 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_03675 6665b590dbc47c387bfa4a83ff1bbb6d 481 SUPERFAMILY SSF47384 249 314 5.3E-6 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN78_03660 5f59ef66c2cc8a945a90e88aceb79f45 332 Pfam PF02237 Biotin protein ligase C terminal domain 283 327 2.8E-12 T 13-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BEN78_03660 5f59ef66c2cc8a945a90e88aceb79f45 332 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 91 326 1.1E-46 T 13-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BEN78_03660 5f59ef66c2cc8a945a90e88aceb79f45 332 Gene3D G3DSA:1.10.10.10 6 63 3.3E-13 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_03660 5f59ef66c2cc8a945a90e88aceb79f45 332 Pfam PF08279 HTH domain 10 57 1.7E-10 T 13-10-2018 IPR013196 Helix-turn-helix, type 11 BEN78_03660 5f59ef66c2cc8a945a90e88aceb79f45 332 Gene3D G3DSA:3.30.930.10 71 280 4.6E-49 T 13-10-2018 BEN78_03660 5f59ef66c2cc8a945a90e88aceb79f45 332 SUPERFAMILY SSF55681 87 277 1.17E-43 T 13-10-2018 BEN78_03660 5f59ef66c2cc8a945a90e88aceb79f45 332 Gene3D G3DSA:2.30.30.100 281 331 8.3E-14 T 13-10-2018 BEN78_03660 5f59ef66c2cc8a945a90e88aceb79f45 332 SUPERFAMILY SSF50037 282 327 5.04E-9 T 13-10-2018 IPR008988 Transcriptional repressor, C-terminal BEN78_03660 5f59ef66c2cc8a945a90e88aceb79f45 332 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 6 327 29.093 T 13-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 BEN78_03660 5f59ef66c2cc8a945a90e88aceb79f45 332 SUPERFAMILY SSF46785 7 59 9.75E-9 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_03660 5f59ef66c2cc8a945a90e88aceb79f45 332 Pfam PF03099 Biotin/lipoate A/B protein ligase family 113 204 2.5E-7 T 13-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 BEN78_09890 c45725a5bfb71d0dfb0156520549e4df 219 SUPERFAMILY SSF52172 7 148 1.34E-16 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_09890 c45725a5bfb71d0dfb0156520549e4df 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 172 3.4E-7 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_09890 c45725a5bfb71d0dfb0156520549e4df 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 188 3.4E-7 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_09890 c45725a5bfb71d0dfb0156520549e4df 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 200 3.4E-7 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_09890 c45725a5bfb71d0dfb0156520549e4df 219 Gene3D G3DSA:3.40.50.2300 5 154 1.0E-18 T 13-10-2018 BEN78_09890 c45725a5bfb71d0dfb0156520549e4df 219 Pfam PF00072 Response regulator receiver domain 11 128 1.1E-13 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_09890 c45725a5bfb71d0dfb0156520549e4df 219 Pfam PF00196 Bacterial regulatory proteins, luxR family 157 212 1.0E-14 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_09890 c45725a5bfb71d0dfb0156520549e4df 219 Gene3D G3DSA:1.10.10.10 155 217 3.8E-15 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_09890 c45725a5bfb71d0dfb0156520549e4df 219 SUPERFAMILY SSF46894 148 217 1.6E-16 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BEN78_09890 c45725a5bfb71d0dfb0156520549e4df 219 SMART SM00421 155 212 3.1E-14 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_09890 c45725a5bfb71d0dfb0156520549e4df 219 SMART SM00448 8 128 2.0E-5 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_16180 6be839c6c49ebb37a10864aaf8b99747 429 TIGRFAM TIGR02810 agaZ_gatZ: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit 6 423 4.2E-187 T 13-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 BEN78_16180 6be839c6c49ebb37a10864aaf8b99747 429 Pfam PF08013 Tagatose 6 phosphate kinase 4 423 1.3E-188 T 13-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 BEN78_16180 6be839c6c49ebb37a10864aaf8b99747 429 SUPERFAMILY SSF51569 5 423 4.64E-156 T 13-10-2018 BEN78_16180 6be839c6c49ebb37a10864aaf8b99747 429 Gene3D G3DSA:3.20.20.70 17 286 4.5E-119 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_16180 6be839c6c49ebb37a10864aaf8b99747 429 Gene3D G3DSA:1.10.400.20 287 423 8.1E-44 T 13-10-2018 BEN78_16180 6be839c6c49ebb37a10864aaf8b99747 429 PIRSF PIRSF009264 1 428 8.1E-182 T 13-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 BEN78_11465 258d9422b16ae544dc76f0b7e199aec6 506 Pfam PF02805 Metal binding domain of Ada 13 76 1.4E-27 T 13-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 BEN78_11465 258d9422b16ae544dc76f0b7e199aec6 506 Gene3D G3DSA:1.10.340.30 324 441 1.2E-32 T 13-10-2018 BEN78_11465 258d9422b16ae544dc76f0b7e199aec6 506 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 142 184 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BEN78_11465 258d9422b16ae544dc76f0b7e199aec6 506 Gene3D G3DSA:1.10.10.60 86 194 3.9E-21 T 13-10-2018 BEN78_11465 258d9422b16ae544dc76f0b7e199aec6 506 Pfam PF06029 AlkA N-terminal domain 201 323 1.2E-33 T 13-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal BEN78_11465 258d9422b16ae544dc76f0b7e199aec6 506 SMART SM01009 201 323 1.3E-46 T 13-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal BEN78_11465 258d9422b16ae544dc76f0b7e199aec6 506 Gene3D G3DSA:3.30.310.20 201 323 1.4E-29 T 13-10-2018 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily BEN78_11465 258d9422b16ae544dc76f0b7e199aec6 506 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 329 479 1.6E-9 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 BEN78_11465 258d9422b16ae544dc76f0b7e199aec6 506 SUPERFAMILY SSF48150 313 489 6.46E-44 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 BEN78_11465 258d9422b16ae544dc76f0b7e199aec6 506 SMART SM00342 105 188 1.5E-20 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BEN78_11465 258d9422b16ae544dc76f0b7e199aec6 506 SMART SM00478 333 492 1.5E-16 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 BEN78_11465 258d9422b16ae544dc76f0b7e199aec6 506 Pfam PF12833 Helix-turn-helix domain 111 190 2.2E-20 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BEN78_11465 258d9422b16ae544dc76f0b7e199aec6 506 Gene3D G3DSA:1.10.1670.10 443 496 7.5E-13 T 13-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 BEN78_11465 258d9422b16ae544dc76f0b7e199aec6 506 SUPERFAMILY SSF55945 201 304 2.2E-23 T 13-10-2018 BEN78_11465 258d9422b16ae544dc76f0b7e199aec6 506 SUPERFAMILY SSF46689 141 191 7.17E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN78_11465 258d9422b16ae544dc76f0b7e199aec6 506 Gene3D G3DSA:3.40.10.10 7 78 3.6E-27 T 13-10-2018 IPR035451 Ada-like domain superfamily BEN78_11465 258d9422b16ae544dc76f0b7e199aec6 506 SUPERFAMILY SSF57884 7 85 1.7E-30 T 13-10-2018 IPR035451 Ada-like domain superfamily BEN78_09320 053944027a44b7fdb7b85e96a0547eb6 651 PRINTS PR00723 Subtilisin serine protease family (S8) signature 265 278 3.4E-15 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN78_09320 053944027a44b7fdb7b85e96a0547eb6 651 PRINTS PR00723 Subtilisin serine protease family (S8) signature 198 217 3.4E-15 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN78_09320 053944027a44b7fdb7b85e96a0547eb6 651 PRINTS PR00723 Subtilisin serine protease family (S8) signature 461 477 3.4E-15 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN78_09320 053944027a44b7fdb7b85e96a0547eb6 651 Pfam PF00082 Subtilase family 198 505 2.9E-42 T 13-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BEN78_09320 053944027a44b7fdb7b85e96a0547eb6 651 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 462 472 - T 13-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site BEN78_09320 053944027a44b7fdb7b85e96a0547eb6 651 Gene3D G3DSA:3.40.50.200 156 532 2.7E-84 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BEN78_09320 053944027a44b7fdb7b85e96a0547eb6 651 SUPERFAMILY SSF52743 184 527 7.86E-64 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BEN78_09320 053944027a44b7fdb7b85e96a0547eb6 651 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 203 213 - T 13-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site BEN78_09320 053944027a44b7fdb7b85e96a0547eb6 651 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 566 631 2.8E-6 T 13-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial BEN78_09320 053944027a44b7fdb7b85e96a0547eb6 651 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 269 279 - T 13-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site BEN78_09320 053944027a44b7fdb7b85e96a0547eb6 651 Gene3D G3DSA:2.60.120.380 547 646 3.4E-23 T 13-10-2018 BEN78_12235 3da5e4f57271ec4c67974b646ad0b7dc 254 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 8 83 2.4E-12 T 13-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 BEN78_12235 3da5e4f57271ec4c67974b646ad0b7dc 254 Gene3D G3DSA:3.30.1330.30 1 79 9.1E-16 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like BEN78_12235 3da5e4f57271ec4c67974b646ad0b7dc 254 SUPERFAMILY SSF75217 80 253 6.54E-47 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases BEN78_12235 3da5e4f57271ec4c67974b646ad0b7dc 254 SMART SM00967 8 84 3.8E-10 T 13-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 BEN78_12235 3da5e4f57271ec4c67974b646ad0b7dc 254 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 6 253 38.607 T 13-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB BEN78_12235 3da5e4f57271ec4c67974b646ad0b7dc 254 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 7 252 7.2E-70 T 13-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 BEN78_12235 3da5e4f57271ec4c67974b646ad0b7dc 254 Gene3D G3DSA:3.40.1280.10 81 253 1.0E-57 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BEN78_12235 3da5e4f57271ec4c67974b646ad0b7dc 254 Pfam PF00588 SpoU rRNA Methylase family 101 246 3.2E-36 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 BEN78_12235 3da5e4f57271ec4c67974b646ad0b7dc 254 SUPERFAMILY SSF55315 3 77 5.65E-14 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like BEN78_01265 25f47e3d9206600330235a285c4f5720 262 Pfam PF08220 DeoR-like helix-turn-helix domain 12 63 4.4E-14 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BEN78_01265 25f47e3d9206600330235a285c4f5720 262 Pfam PF00455 DeoR C terminal sensor domain 87 238 2.8E-41 T 13-10-2018 IPR014036 DeoR C-terminal sensor domain BEN78_01265 25f47e3d9206600330235a285c4f5720 262 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 30 44 3.4E-8 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BEN78_01265 25f47e3d9206600330235a285c4f5720 262 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 44 62 3.4E-8 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BEN78_01265 25f47e3d9206600330235a285c4f5720 262 SMART SM01134 77 240 1.8E-51 T 13-10-2018 BEN78_01265 25f47e3d9206600330235a285c4f5720 262 SUPERFAMILY SSF100950 83 242 3.68E-23 T 13-10-2018 IPR037171 NagB/RpiA transferase-like BEN78_01265 25f47e3d9206600330235a285c4f5720 262 Gene3D G3DSA:1.10.10.10 2 58 6.8E-7 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_01265 25f47e3d9206600330235a285c4f5720 262 SUPERFAMILY SSF46785 10 64 1.07E-9 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_01265 25f47e3d9206600330235a285c4f5720 262 SMART SM00420 12 64 4.1E-12 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BEN78_09010 a56608dc101584571e20f077035a81f7 206 Pfam PF00072 Response regulator receiver domain 10 121 6.2E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_09010 a56608dc101584571e20f077035a81f7 206 SMART SM00448 8 121 6.5E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_09010 a56608dc101584571e20f077035a81f7 206 SUPERFAMILY SSF46894 134 206 2.41E-18 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BEN78_09010 a56608dc101584571e20f077035a81f7 206 SUPERFAMILY SSF52172 8 134 2.42E-31 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_09010 a56608dc101584571e20f077035a81f7 206 SMART SM00421 143 200 6.4E-19 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_09010 a56608dc101584571e20f077035a81f7 206 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 1.1E-8 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_09010 a56608dc101584571e20f077035a81f7 206 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 1.1E-8 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_09010 a56608dc101584571e20f077035a81f7 206 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 1.1E-8 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_09010 a56608dc101584571e20f077035a81f7 206 Gene3D G3DSA:3.40.50.2300 4 141 1.6E-32 T 13-10-2018 BEN78_09010 a56608dc101584571e20f077035a81f7 206 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 200 7.7E-15 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_09010 a56608dc101584571e20f077035a81f7 206 Gene3D G3DSA:1.10.10.10 142 206 1.6E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_14930 2f141a82fa1375332ae9c316a0955790 317 Pfam PF13354 Beta-lactamase enzyme family 40 280 3.3E-46 T 13-10-2018 BEN78_14930 2f141a82fa1375332ae9c316a0955790 317 Gene3D G3DSA:3.40.710.10 11 310 4.5E-75 T 13-10-2018 BEN78_14930 2f141a82fa1375332ae9c316a0955790 317 SUPERFAMILY SSF56601 14 308 1.06E-58 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BEN78_14930 2f141a82fa1375332ae9c316a0955790 317 PRINTS PR00118 Beta-lactamase class A signature 242 257 3.7E-19 T 13-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 BEN78_14930 2f141a82fa1375332ae9c316a0955790 317 PRINTS PR00118 Beta-lactamase class A signature 49 66 3.7E-19 T 13-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 BEN78_14930 2f141a82fa1375332ae9c316a0955790 317 PRINTS PR00118 Beta-lactamase class A signature 17 41 3.7E-19 T 13-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 BEN78_14930 2f141a82fa1375332ae9c316a0955790 317 PRINTS PR00118 Beta-lactamase class A signature 189 214 3.7E-19 T 13-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 BEN78_14930 2f141a82fa1375332ae9c316a0955790 317 ProSitePatterns PS00146 Beta-lactamase class-A active site. 51 66 - T 13-10-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 BEN78_02110 6f425e46a168a6edf41160ba74e2f991 130 Gene3D G3DSA:1.10.3830.10 14 130 1.3E-31 T 13-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 BEN78_02110 6f425e46a168a6edf41160ba74e2f991 130 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 81 92 - T 13-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 BEN78_02110 6f425e46a168a6edf41160ba74e2f991 130 Pfam PF01219 Prokaryotic diacylglycerol kinase 28 128 2.0E-28 T 13-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 BEN78_04805 b0fb4799aad29d7e75817ec3dcbcfbd1 408 Pfam PF01551 Peptidase family M23 308 401 1.9E-29 T 13-10-2018 IPR016047 Peptidase M23 BEN78_04805 b0fb4799aad29d7e75817ec3dcbcfbd1 408 Gene3D G3DSA:2.70.70.10 274 407 1.1E-37 T 13-10-2018 IPR011055 Duplicated hybrid motif BEN78_04805 b0fb4799aad29d7e75817ec3dcbcfbd1 408 SUPERFAMILY SSF51261 224 405 1.73E-48 T 13-10-2018 IPR011055 Duplicated hybrid motif BEN78_10560 9951f7254a064624cd64832ec34ab4ce 301 Gene3D G3DSA:3.55.30.10 5 183 4.5E-49 T 13-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 BEN78_10560 9951f7254a064624cd64832ec34ab4ce 301 SUPERFAMILY SSF118352 232 287 3.79E-16 T 13-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 BEN78_10560 9951f7254a064624cd64832ec34ab4ce 301 Gene3D G3DSA:1.10.287.480 185 232 5.9E-6 T 13-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily BEN78_10560 9951f7254a064624cd64832ec34ab4ce 301 SUPERFAMILY SSF64397 9 239 8.63E-58 T 13-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 BEN78_10560 9951f7254a064624cd64832ec34ab4ce 301 Pfam PF01430 Hsp33 protein 10 279 5.1E-75 T 13-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 BEN78_10560 9951f7254a064624cd64832ec34ab4ce 301 PIRSF PIRSF005261 1 290 2.3E-79 T 13-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 BEN78_10560 9951f7254a064624cd64832ec34ab4ce 301 Gene3D G3DSA:3.90.1280.10 233 289 1.3E-18 T 13-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 BEN78_11645 496a7a5a3fc8d22f1949ae0c517035b9 1086 SUPERFAMILY SSF49464 33 130 1.37E-11 T 13-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily BEN78_11645 496a7a5a3fc8d22f1949ae0c517035b9 1086 Gene3D G3DSA:2.60.40.1120 32 116 3.3E-9 T 13-10-2018 BEN78_11645 496a7a5a3fc8d22f1949ae0c517035b9 1086 SUPERFAMILY SSF56935 112 1035 1.65E-44 T 13-10-2018 BEN78_11645 496a7a5a3fc8d22f1949ae0c517035b9 1086 Pfam PF13620 Carboxypeptidase regulatory-like domain 34 114 1.8E-16 T 13-10-2018 BEN78_09810 2c690e08d40b1bdaa0a523be113068b6 436 Gene3D G3DSA:3.40.350.10 3 170 4.0E-56 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BEN78_09810 2c690e08d40b1bdaa0a523be113068b6 436 SUPERFAMILY SSF53092 3 173 3.92E-54 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BEN78_09810 2c690e08d40b1bdaa0a523be113068b6 436 PRINTS PR00599 Methionine aminopeptidase-1 signature 369 381 4.4E-6 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BEN78_09810 2c690e08d40b1bdaa0a523be113068b6 436 PRINTS PR00599 Methionine aminopeptidase-1 signature 251 267 4.4E-6 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BEN78_09810 2c690e08d40b1bdaa0a523be113068b6 436 Pfam PF00557 Metallopeptidase family M24 180 410 5.8E-63 T 13-10-2018 IPR000994 Peptidase M24 BEN78_09810 2c690e08d40b1bdaa0a523be113068b6 436 Pfam PF05195 Aminopeptidase P, N-terminal domain 7 125 1.8E-37 T 13-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 BEN78_09810 2c690e08d40b1bdaa0a523be113068b6 436 SUPERFAMILY SSF55920 174 433 6.28E-83 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like BEN78_09810 2c690e08d40b1bdaa0a523be113068b6 436 SMART SM01011 1 135 8.8E-65 T 13-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 BEN78_09810 2c690e08d40b1bdaa0a523be113068b6 436 Gene3D G3DSA:3.90.230.10 171 436 6.0E-98 T 13-10-2018 BEN78_16355 97bad87bf53e5a2e7e1fa98310707312 438 SUPERFAMILY SSF54373 270 360 8.37E-18 T 13-10-2018 BEN78_16355 97bad87bf53e5a2e7e1fa98310707312 438 Gene3D G3DSA:3.50.50.60 94 401 5.1E-53 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_16355 97bad87bf53e5a2e7e1fa98310707312 438 Gene3D G3DSA:3.50.50.60 4 55 6.9E-10 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_16355 97bad87bf53e5a2e7e1fa98310707312 438 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 48.756 T 13-10-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 BEN78_16355 97bad87bf53e5a2e7e1fa98310707312 438 Gene3D G3DSA:3.30.9.10 134 362 5.1E-53 T 13-10-2018 BEN78_16355 97bad87bf53e5a2e7e1fa98310707312 438 SUPERFAMILY SSF51905 1 418 1.42E-52 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_16355 97bad87bf53e5a2e7e1fa98310707312 438 Pfam PF01266 FAD dependent oxidoreductase 3 398 1.2E-72 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 BEN78_16355 97bad87bf53e5a2e7e1fa98310707312 438 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 215 231 9.5E-5 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN78_16355 97bad87bf53e5a2e7e1fa98310707312 438 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 2 24 9.5E-5 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN78_16370 1fe2cef5f172f9eecc97fd14a5ab1fb0 631 Pfam PF00005 ABC transporter 329 462 3.0E-21 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_16370 1fe2cef5f172f9eecc97fd14a5ab1fb0 631 Gene3D G3DSA:3.40.50.300 275 530 5.3E-63 T 13-10-2018 BEN78_16370 1fe2cef5f172f9eecc97fd14a5ab1fb0 631 Gene3D G3DSA:3.40.50.300 5 272 3.5E-67 T 13-10-2018 BEN78_16370 1fe2cef5f172f9eecc97fd14a5ab1fb0 631 Pfam PF16326 ABC transporter C-terminal domain 562 629 1.6E-21 T 13-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 BEN78_16370 1fe2cef5f172f9eecc97fd14a5ab1fb0 631 SUPERFAMILY SSF52540 307 509 1.16E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_16370 1fe2cef5f172f9eecc97fd14a5ab1fb0 631 Pfam PF12848 ABC transporter 217 292 2.2E-11 T 13-10-2018 IPR032781 ABC-transporter extension domain BEN78_16370 1fe2cef5f172f9eecc97fd14a5ab1fb0 631 SUPERFAMILY SSF52540 4 224 8.85E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_16370 1fe2cef5f172f9eecc97fd14a5ab1fb0 631 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN78_16370 1fe2cef5f172f9eecc97fd14a5ab1fb0 631 Pfam PF00005 ABC transporter 19 178 1.7E-25 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_16370 1fe2cef5f172f9eecc97fd14a5ab1fb0 631 ProSitePatterns PS00211 ABC transporters family signature. 434 448 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN78_16370 1fe2cef5f172f9eecc97fd14a5ab1fb0 631 SMART SM00382 28 223 2.0E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_16370 1fe2cef5f172f9eecc97fd14a5ab1fb0 631 SMART SM00382 337 507 1.4E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_16370 1fe2cef5f172f9eecc97fd14a5ab1fb0 631 Gene3D G3DSA:1.10.287.380 554 631 2.1E-24 T 13-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 BEN78_10775 8acf7c392ad88a57b19dccc354699acf 294 SUPERFAMILY SSF117396 1 287 2.62E-78 T 13-10-2018 IPR036520 UPF0759 superfamily BEN78_10775 8acf7c392ad88a57b19dccc354699acf 294 Pfam PF01904 Protein of unknown function DUF72 20 285 9.8E-69 T 13-10-2018 IPR002763 Protein of unknown function DUF72 BEN78_10775 8acf7c392ad88a57b19dccc354699acf 294 Gene3D G3DSA:3.20.20.410 1 291 1.1E-61 T 13-10-2018 IPR036520 UPF0759 superfamily BEN78_12560 48b760cca384b75f501020ce9e947bed 686 Gene3D G3DSA:2.20.28.20 139 173 1.3E-142 T 13-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BEN78_12560 48b760cca384b75f501020ce9e947bed 686 SUPERFAMILY SSF50249 579 685 4.65E-28 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN78_12560 48b760cca384b75f501020ce9e947bed 686 SUPERFAMILY SSF57770 139 173 6.41E-12 T 13-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BEN78_12560 48b760cca384b75f501020ce9e947bed 686 SUPERFAMILY SSF52374 3 385 3.43E-92 T 13-10-2018 BEN78_12560 48b760cca384b75f501020ce9e947bed 686 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 6 535 4.1E-162 T 13-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BEN78_12560 48b760cca384b75f501020ce9e947bed 686 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 560 685 4.4E-37 T 13-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BEN78_12560 48b760cca384b75f501020ce9e947bed 686 SUPERFAMILY SSF47323 388 547 3.27E-38 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN78_12560 48b760cca384b75f501020ce9e947bed 686 Hamap MF_00098 Methionine--tRNA ligase [metG]. 3 545 38.574 T 13-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BEN78_12560 48b760cca384b75f501020ce9e947bed 686 Pfam PF01588 Putative tRNA binding domain 589 683 9.5E-21 T 13-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 BEN78_12560 48b760cca384b75f501020ce9e947bed 686 Gene3D G3DSA:2.40.50.140 576 685 2.1E-29 T 13-10-2018 BEN78_12560 48b760cca384b75f501020ce9e947bed 686 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 23 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN78_12560 48b760cca384b75f501020ce9e947bed 686 Gene3D G3DSA:3.40.50.620 6 383 1.3E-142 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_12560 48b760cca384b75f501020ce9e947bed 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 7 20 3.9E-22 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BEN78_12560 48b760cca384b75f501020ce9e947bed 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 39 53 3.9E-22 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BEN78_12560 48b760cca384b75f501020ce9e947bed 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 289 304 3.9E-22 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BEN78_12560 48b760cca384b75f501020ce9e947bed 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 250 261 3.9E-22 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BEN78_12560 48b760cca384b75f501020ce9e947bed 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 383 394 3.9E-22 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BEN78_12560 48b760cca384b75f501020ce9e947bed 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 87 98 3.9E-22 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BEN78_12560 48b760cca384b75f501020ce9e947bed 686 Pfam PF09334 tRNA synthetases class I (M) 6 395 1.1E-147 T 13-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN78_12560 48b760cca384b75f501020ce9e947bed 686 Gene3D G3DSA:1.10.730.10 388 526 5.2E-31 T 13-10-2018 BEN78_12690 bd6746e2134925e65cb26f7ae44f50fa 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 6.9E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_12690 bd6746e2134925e65cb26f7ae44f50fa 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 6.9E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_12690 bd6746e2134925e65cb26f7ae44f50fa 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 6.9E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_12690 bd6746e2134925e65cb26f7ae44f50fa 294 Pfam PF03466 LysR substrate binding domain 96 293 4.2E-25 T 13-10-2018 IPR005119 LysR, substrate-binding BEN78_12690 bd6746e2134925e65cb26f7ae44f50fa 294 SUPERFAMILY SSF46785 6 88 3.05E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_12690 bd6746e2134925e65cb26f7ae44f50fa 294 Gene3D G3DSA:3.40.190.10 104 289 3.7E-38 T 13-10-2018 BEN78_12690 bd6746e2134925e65cb26f7ae44f50fa 294 Gene3D G3DSA:1.10.10.10 8 95 6.0E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_12690 bd6746e2134925e65cb26f7ae44f50fa 294 SUPERFAMILY SSF53850 97 293 7.6E-26 T 13-10-2018 BEN78_12690 bd6746e2134925e65cb26f7ae44f50fa 294 Gene3D G3DSA:3.40.190.10 165 263 3.7E-38 T 13-10-2018 BEN78_12690 bd6746e2134925e65cb26f7ae44f50fa 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 2.9E-22 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_03105 511a7f8bac2ec224bc5c08b53220278a 282 Gene3D G3DSA:2.60.120.10 14 267 3.5E-108 T 13-10-2018 IPR014710 RmlC-like jelly roll fold BEN78_03105 511a7f8bac2ec224bc5c08b53220278a 282 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 3 282 51.72 T 13-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 BEN78_03105 511a7f8bac2ec224bc5c08b53220278a 282 SUPERFAMILY SSF51182 4 266 9.13E-97 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily BEN78_03105 511a7f8bac2ec224bc5c08b53220278a 282 Pfam PF04962 KduI/IolB family 76 271 7.3E-37 T 13-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 BEN78_03105 511a7f8bac2ec224bc5c08b53220278a 282 Gene3D G3DSA:2.60.120.520 32 148 3.5E-108 T 13-10-2018 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 BEN78_03105 511a7f8bac2ec224bc5c08b53220278a 282 PIRSF PIRSF006625 3 282 4.1E-124 T 13-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 BEN78_12780 c06f715b299be4ccf8d4b543be581867 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 102 113 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BEN78_12780 c06f715b299be4ccf8d4b543be581867 162 Gene3D G3DSA:3.30.70.3270 36 162 8.2E-35 T 13-10-2018 BEN78_12780 c06f715b299be4ccf8d4b543be581867 162 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 19 137 2.2E-43 T 13-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12780 c06f715b299be4ccf8d4b543be581867 162 SUPERFAMILY SSF54862 36 145 1.17E-24 T 13-10-2018 BEN78_12780 c06f715b299be4ccf8d4b543be581867 162 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 10 159 26.529 T 13-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12780 c06f715b299be4ccf8d4b543be581867 162 Pfam PF12838 4Fe-4S dicluster domain 62 115 4.9E-12 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BEN78_04885 3df0d3efd6e491bd092396c20a01c112 194 Gene3D G3DSA:2.60.370.10 51 184 4.6E-49 T 13-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_04885 3df0d3efd6e491bd092396c20a01c112 194 PIRSF PIRSF005413 2 186 1.3E-60 T 13-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_04885 3df0d3efd6e491bd092396c20a01c112 194 SUPERFAMILY SSF110111 57 171 1.28E-45 T 13-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_04885 3df0d3efd6e491bd092396c20a01c112 194 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 26 170 1.5E-49 T 13-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_08005 b2a2c483848ef375066505b047bce37d 327 Gene3D G3DSA:3.40.1190.20 3 327 5.3E-101 T 13-10-2018 IPR029056 Ribokinase-like BEN78_08005 b2a2c483848ef375066505b047bce37d 327 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 253 266 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 BEN78_08005 b2a2c483848ef375066505b047bce37d 327 SUPERFAMILY SSF53613 6 323 1.39E-70 T 13-10-2018 IPR029056 Ribokinase-like BEN78_08005 b2a2c483848ef375066505b047bce37d 327 Pfam PF00294 pfkB family carbohydrate kinase 7 315 3.0E-59 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB BEN78_00645 d03a336c2c05f4fe2a749b1479352b1d 107 SUPERFAMILY SSF46626 6 106 1.3E-20 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BEN78_00645 d03a336c2c05f4fe2a749b1479352b1d 107 Gene3D G3DSA:1.10.760.10 25 105 7.6E-22 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BEN78_00645 d03a336c2c05f4fe2a749b1479352b1d 107 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 34 102 1.6E-6 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_15960 4c2972d4afe0f1766ed6b1a8c65c2beb 406 Pfam PF08014 Domain of unknown function (DUF1704) 51 386 7.1E-79 T 13-10-2018 IPR012548 Protein of unknown function DUF1704 BEN78_15960 4c2972d4afe0f1766ed6b1a8c65c2beb 406 SMART SM01154 49 388 3.8E-91 T 13-10-2018 IPR012548 Protein of unknown function DUF1704 BEN78_01085 8b785c956b9a7c6230a40b834d3b9e5a 242 Gene3D G3DSA:3.30.110.170 42 239 5.1E-67 T 13-10-2018 BEN78_01085 8b785c956b9a7c6230a40b834d3b9e5a 242 Gene3D G3DSA:3.30.70.2970 52 159 5.1E-67 T 13-10-2018 BEN78_01085 8b785c956b9a7c6230a40b834d3b9e5a 242 Pfam PF04402 Protein of unknown function (DUF541) 41 238 1.9E-51 T 13-10-2018 IPR007497 Protein of unknown function DUF541 BEN78_16185 b6817e42476868f697089350ea1b838f 303 SUPERFAMILY SSF103481 191 296 2.88E-9 T 13-10-2018 BEN78_16185 b6817e42476868f697089350ea1b838f 303 Pfam PF00892 EamA-like transporter family 16 142 1.2E-11 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BEN78_16185 b6817e42476868f697089350ea1b838f 303 Pfam PF00892 EamA-like transporter family 161 293 1.6E-9 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BEN78_16185 b6817e42476868f697089350ea1b838f 303 SUPERFAMILY SSF103481 53 145 8.5E-9 T 13-10-2018 BEN78_15335 15aa241e7b29117464da79ef6a6b5de3 401 Gene3D G3DSA:3.40.47.10 10 298 1.6E-151 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 BEN78_15335 15aa241e7b29117464da79ef6a6b5de3 401 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 13-10-2018 IPR020610 Thiolase, active site GO:0016747 BEN78_15335 15aa241e7b29117464da79ef6a6b5de3 401 PIRSF PIRSF000429 2 401 5.8E-130 T 13-10-2018 IPR002155 Thiolase GO:0016747 BEN78_15335 15aa241e7b29117464da79ef6a6b5de3 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 399 1.3E-142 T 13-10-2018 IPR002155 Thiolase GO:0016747 BEN78_15335 15aa241e7b29117464da79ef6a6b5de3 401 Pfam PF00108 Thiolase, N-terminal domain 9 270 7.2E-76 T 13-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 BEN78_15335 15aa241e7b29117464da79ef6a6b5de3 401 Gene3D G3DSA:3.40.47.10 129 395 1.6E-151 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 BEN78_15335 15aa241e7b29117464da79ef6a6b5de3 401 SUPERFAMILY SSF53901 7 278 2.08E-76 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 BEN78_15335 15aa241e7b29117464da79ef6a6b5de3 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 13-10-2018 IPR020613 Thiolase, conserved site GO:0016747 BEN78_15335 15aa241e7b29117464da79ef6a6b5de3 401 SUPERFAMILY SSF53901 279 399 1.12E-44 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 BEN78_15335 15aa241e7b29117464da79ef6a6b5de3 401 Pfam PF02803 Thiolase, C-terminal domain 278 399 1.2E-46 T 13-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 BEN78_15335 15aa241e7b29117464da79ef6a6b5de3 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 13-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 BEN78_13115 b51c76afa9ad7d7a26f6be4729759d89 659 Pfam PF13623 SurA N-terminal domain 2 159 1.6E-26 T 13-10-2018 BEN78_13115 b51c76afa9ad7d7a26f6be4729759d89 659 Gene3D G3DSA:3.10.50.40 279 414 1.1E-36 T 13-10-2018 BEN78_13115 b51c76afa9ad7d7a26f6be4729759d89 659 SUPERFAMILY SSF109998 69 264 3.92E-17 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily BEN78_13115 b51c76afa9ad7d7a26f6be4729759d89 659 SUPERFAMILY SSF54534 284 391 4.38E-30 T 13-10-2018 BEN78_13115 b51c76afa9ad7d7a26f6be4729759d89 659 Pfam PF13616 PPIC-type PPIASE domain 286 389 1.9E-26 T 13-10-2018 BEN78_13115 b51c76afa9ad7d7a26f6be4729759d89 659 Gene3D G3DSA:1.10.4030.30 71 205 7.1E-9 T 13-10-2018 BEN78_13115 b51c76afa9ad7d7a26f6be4729759d89 659 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 329 350 - T 13-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 BEN78_15275 1feb1a7372534bf26ed70be8e4ce93c5 415 Pfam PF00994 Probable molybdopterin binding domain 192 326 6.6E-23 T 13-10-2018 IPR001453 MoaB/Mog domain BEN78_15275 1feb1a7372534bf26ed70be8e4ce93c5 415 SUPERFAMILY SSF63867 338 415 4.19E-15 T 13-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BEN78_15275 1feb1a7372534bf26ed70be8e4ce93c5 415 SUPERFAMILY SSF63882 15 188 1.96E-51 T 13-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BEN78_15275 1feb1a7372534bf26ed70be8e4ce93c5 415 SMART SM00852 192 332 3.3E-33 T 13-10-2018 IPR001453 MoaB/Mog domain BEN78_15275 1feb1a7372534bf26ed70be8e4ce93c5 415 Pfam PF03453 MoeA N-terminal region (domain I and II) 17 179 3.7E-41 T 13-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BEN78_15275 1feb1a7372534bf26ed70be8e4ce93c5 415 Gene3D G3DSA:3.90.105.10 36 186 1.6E-116 T 13-10-2018 BEN78_15275 1feb1a7372534bf26ed70be8e4ce93c5 415 Pfam PF03454 MoeA C-terminal region (domain IV) 343 414 2.3E-12 T 13-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BEN78_15275 1feb1a7372534bf26ed70be8e4ce93c5 415 Gene3D G3DSA:2.40.340.10 341 408 1.6E-116 T 13-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BEN78_15275 1feb1a7372534bf26ed70be8e4ce93c5 415 Gene3D G3DSA:2.170.190.11 60 153 1.6E-116 T 13-10-2018 BEN78_15275 1feb1a7372534bf26ed70be8e4ce93c5 415 SUPERFAMILY SSF53218 187 334 8.38E-36 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily BEN78_15275 1feb1a7372534bf26ed70be8e4ce93c5 415 Gene3D G3DSA:3.40.980.10 187 340 1.6E-116 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily BEN78_06590 447b0668018536a9e0a85c6d162e8079 116 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 111 1.2E-5 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BEN78_06590 447b0668018536a9e0a85c6d162e8079 116 SUPERFAMILY SSF54593 8 114 2.15E-23 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN78_06590 447b0668018536a9e0a85c6d162e8079 116 Gene3D G3DSA:3.10.180.10 1 116 5.1E-21 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN78_07150 3a7d79aa6e89567c1e1358fe1061249b 357 SMART SM00876 233 325 3.8E-48 T 13-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 BEN78_07150 3a7d79aa6e89567c1e1358fe1061249b 357 Hamap MF_01694 Biotin synthase [bioB]. 18 326 41.398 T 13-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 BEN78_07150 3a7d79aa6e89567c1e1358fe1061249b 357 SUPERFAMILY SSF102114 18 327 4.71E-94 T 13-10-2018 BEN78_07150 3a7d79aa6e89567c1e1358fe1061249b 357 PIRSF PIRSF001619 3 331 4.2E-129 T 13-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 BEN78_07150 3a7d79aa6e89567c1e1358fe1061249b 357 SMART SM00729 56 268 5.1E-41 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BEN78_07150 3a7d79aa6e89567c1e1358fe1061249b 357 Pfam PF04055 Radical SAM superfamily 62 209 6.3E-16 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BEN78_07150 3a7d79aa6e89567c1e1358fe1061249b 357 Gene3D G3DSA:3.20.20.70 17 328 9.7E-127 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_07150 3a7d79aa6e89567c1e1358fe1061249b 357 TIGRFAM TIGR00433 bioB: biotin synthase 28 323 4.4E-120 T 13-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 BEN78_07150 3a7d79aa6e89567c1e1358fe1061249b 357 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 233 323 2.2E-19 T 13-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 BEN78_14030 aef3810f83dc9c6f09b8e2fdd24d1d70 196 SUPERFAMILY SSF54211 5 122 2.16E-40 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BEN78_14030 aef3810f83dc9c6f09b8e2fdd24d1d70 196 Gene3D G3DSA:3.30.230.30 3 126 1.9E-47 T 13-10-2018 IPR036956 Impact, N-terminal domain superfamily BEN78_14030 aef3810f83dc9c6f09b8e2fdd24d1d70 196 Pfam PF01205 Uncharacterized protein family UPF0029 17 117 1.7E-29 T 13-10-2018 IPR001498 Impact, N-terminal BEN78_14030 aef3810f83dc9c6f09b8e2fdd24d1d70 196 SUPERFAMILY SSF54980 129 192 1.34E-7 T 13-10-2018 IPR035647 EF-G domain III/V-like BEN78_14030 aef3810f83dc9c6f09b8e2fdd24d1d70 196 Pfam PF09186 Domain of unknown function (DUF1949) 134 189 3.1E-7 T 13-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal BEN78_08495 4b80634768268dfddc339113b52bc6a6 293 Pfam PF01063 Amino-transferase class IV 38 257 1.7E-43 T 13-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 BEN78_08495 4b80634768268dfddc339113b52bc6a6 293 SUPERFAMILY SSF56752 9 290 8.76E-75 T 13-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 BEN78_08495 4b80634768268dfddc339113b52bc6a6 293 Gene3D G3DSA:3.20.10.10 132 285 7.4E-39 T 13-10-2018 BEN78_08495 4b80634768268dfddc339113b52bc6a6 293 Gene3D G3DSA:3.30.470.10 3 127 1.9E-29 T 13-10-2018 BEN78_12490 42c5b29b6c0f82284f5a6eb33d7c501f 145 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 8 120 27.921 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_12490 42c5b29b6c0f82284f5a6eb33d7c501f 145 Pfam PF01245 Ribosomal protein L19 10 118 2.0E-45 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_12490 42c5b29b6c0f82284f5a6eb33d7c501f 145 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 9 119 4.6E-44 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_12490 42c5b29b6c0f82284f5a6eb33d7c501f 145 ProSitePatterns PS01015 Ribosomal protein L19 signature. 92 107 - T 13-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_12490 42c5b29b6c0f82284f5a6eb33d7c501f 145 PRINTS PR00061 Ribosomal protein L19 signature 94 119 1.0E-36 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_12490 42c5b29b6c0f82284f5a6eb33d7c501f 145 PRINTS PR00061 Ribosomal protein L19 signature 40 69 1.0E-36 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_12490 42c5b29b6c0f82284f5a6eb33d7c501f 145 PRINTS PR00061 Ribosomal protein L19 signature 10 39 1.0E-36 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_12490 42c5b29b6c0f82284f5a6eb33d7c501f 145 PIRSF PIRSF002191 1 140 1.3E-48 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_12490 42c5b29b6c0f82284f5a6eb33d7c501f 145 SUPERFAMILY SSF50104 8 130 2.11E-42 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily BEN78_12490 42c5b29b6c0f82284f5a6eb33d7c501f 145 Gene3D G3DSA:2.30.30.790 16 124 3.8E-10 T 13-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_11900 7967b7a01322a3b86a987db46b669f51 562 Pfam PF00245 Alkaline phosphatase 70 530 3.2E-121 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BEN78_11900 7967b7a01322a3b86a987db46b669f51 562 SUPERFAMILY SSF53649 65 531 9.29E-140 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BEN78_11900 7967b7a01322a3b86a987db46b669f51 562 Gene3D G3DSA:3.40.720.10 43 547 8.0E-170 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BEN78_11900 7967b7a01322a3b86a987db46b669f51 562 PRINTS PR00113 Alkaline phosphatase signature 320 349 6.0E-40 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BEN78_11900 7967b7a01322a3b86a987db46b669f51 562 PRINTS PR00113 Alkaline phosphatase signature 126 141 6.0E-40 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BEN78_11900 7967b7a01322a3b86a987db46b669f51 562 PRINTS PR00113 Alkaline phosphatase signature 172 192 6.0E-40 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BEN78_11900 7967b7a01322a3b86a987db46b669f51 562 PRINTS PR00113 Alkaline phosphatase signature 70 90 6.0E-40 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BEN78_11900 7967b7a01322a3b86a987db46b669f51 562 PRINTS PR00113 Alkaline phosphatase signature 235 245 6.0E-40 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BEN78_11900 7967b7a01322a3b86a987db46b669f51 562 SMART SM00098 71 534 5.0E-149 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BEN78_16535 dc648086d23c4639523a2d6600b1f203 382 Gene3D G3DSA:1.20.140.10 235 380 1.5E-54 T 13-10-2018 BEN78_16535 dc648086d23c4639523a2d6600b1f203 382 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 3.2E-26 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 BEN78_16535 dc648086d23c4639523a2d6600b1f203 382 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 377 2.2E-50 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 BEN78_16535 dc648086d23c4639523a2d6600b1f203 382 SUPERFAMILY SSF47203 228 381 2.58E-59 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 BEN78_16535 dc648086d23c4639523a2d6600b1f203 382 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 BEN78_16535 dc648086d23c4639523a2d6600b1f203 382 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 6.9E-31 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 BEN78_16535 dc648086d23c4639523a2d6600b1f203 382 SUPERFAMILY SSF56645 2 242 6.68E-75 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 BEN78_16535 dc648086d23c4639523a2d6600b1f203 382 PIRSF PIRSF016578 222 375 2.2E-11 T 13-10-2018 BEN78_16535 dc648086d23c4639523a2d6600b1f203 382 PIRSF PIRSF016578 128 207 0.0043 T 13-10-2018 BEN78_16535 dc648086d23c4639523a2d6600b1f203 382 PIRSF PIRSF016578 6 96 9.1E-8 T 13-10-2018 BEN78_16535 dc648086d23c4639523a2d6600b1f203 382 Gene3D G3DSA:1.10.540.10 1 120 3.1E-37 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 BEN78_16535 dc648086d23c4639523a2d6600b1f203 382 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 BEN78_16535 dc648086d23c4639523a2d6600b1f203 382 Gene3D G3DSA:2.40.110.10 121 234 2.4E-39 T 13-10-2018 BEN78_13585 ed2c89ce7ef6812808f2fe79e87d273b 460 ProSitePatterns PS00163 Fumarate lyases signature. 299 308 - T 13-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 BEN78_13585 ed2c89ce7ef6812808f2fe79e87d273b 460 PRINTS PR00149 Fumarate lyase superfamily signature 168 186 1.5E-14 T 13-10-2018 IPR000362 Fumarate lyase family BEN78_13585 ed2c89ce7ef6812808f2fe79e87d273b 460 PRINTS PR00149 Fumarate lyase superfamily signature 256 283 1.5E-14 T 13-10-2018 IPR000362 Fumarate lyase family BEN78_13585 ed2c89ce7ef6812808f2fe79e87d273b 460 PRINTS PR00149 Fumarate lyase superfamily signature 122 140 1.5E-14 T 13-10-2018 IPR000362 Fumarate lyase family BEN78_13585 ed2c89ce7ef6812808f2fe79e87d273b 460 PRINTS PR00149 Fumarate lyase superfamily signature 299 315 1.5E-14 T 13-10-2018 IPR000362 Fumarate lyase family BEN78_13585 ed2c89ce7ef6812808f2fe79e87d273b 460 Gene3D G3DSA:1.20.200.10 123 451 3.5E-148 T 13-10-2018 BEN78_13585 ed2c89ce7ef6812808f2fe79e87d273b 460 SUPERFAMILY SSF48557 15 457 1.54E-102 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 BEN78_13585 ed2c89ce7ef6812808f2fe79e87d273b 460 Gene3D G3DSA:1.10.275.10 2 122 2.5E-44 T 13-10-2018 IPR024083 Fumarase/histidase, N-terminal BEN78_13585 ed2c89ce7ef6812808f2fe79e87d273b 460 Pfam PF00206 Lyase 19 317 1.3E-58 T 13-10-2018 IPR022761 Fumarate lyase, N-terminal BEN78_13585 ed2c89ce7ef6812808f2fe79e87d273b 460 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 17 455 2.1E-119 T 13-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BEN78_13585 ed2c89ce7ef6812808f2fe79e87d273b 460 Pfam PF08328 Adenylosuccinate lyase C-terminal 336 450 1.1E-47 T 13-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 BEN78_13585 ed2c89ce7ef6812808f2fe79e87d273b 460 Gene3D G3DSA:1.10.40.30 387 450 3.5E-148 T 13-10-2018 BEN78_10740 ee5574b3d448e9c385112b40a025af42 345 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 13-10-2018 IPR001482 Type II/IV secretion system protein BEN78_10740 ee5574b3d448e9c385112b40a025af42 345 SMART SM00382 122 256 0.0085 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_10740 ee5574b3d448e9c385112b40a025af42 345 SUPERFAMILY SSF52540 5 333 1.47E-69 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_10740 ee5574b3d448e9c385112b40a025af42 345 Gene3D G3DSA:3.30.450.90 1 100 1.6E-36 T 13-10-2018 BEN78_10740 ee5574b3d448e9c385112b40a025af42 345 Pfam PF00437 Type II/IV secretion system protein 12 268 2.1E-46 T 13-10-2018 IPR001482 Type II/IV secretion system protein BEN78_10740 ee5574b3d448e9c385112b40a025af42 345 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 341 7.3E-153 T 13-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 BEN78_10740 ee5574b3d448e9c385112b40a025af42 345 Gene3D G3DSA:3.40.50.300 101 345 5.7E-103 T 13-10-2018 BEN78_03845 02d99c1b473c440ac8b671acf26d04a5 196 SUPERFAMILY SSF55811 7 152 1.23E-30 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BEN78_03845 02d99c1b473c440ac8b671acf26d04a5 196 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 35.851 T 13-10-2018 IPR022927 RNA pyrophosphohydrolase RppH BEN78_03845 02d99c1b473c440ac8b671acf26d04a5 196 Pfam PF00293 NUDIX domain 7 129 3.7E-23 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BEN78_03845 02d99c1b473c440ac8b671acf26d04a5 196 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BEN78_03845 02d99c1b473c440ac8b671acf26d04a5 196 Gene3D G3DSA:3.90.79.10 1 159 2.9E-40 T 13-10-2018 BEN78_02350 12259811f6466496b5921b8dd6aa6c7f 470 Gene3D G3DSA:3.40.50.11290 209 306 1.9E-40 T 13-10-2018 BEN78_02350 12259811f6466496b5921b8dd6aa6c7f 470 Pfam PF14403 Circularly permuted ATP-grasp type 2 71 446 1.3E-161 T 13-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 BEN78_02350 12259811f6466496b5921b8dd6aa6c7f 470 PIRSF PIRSF005522 1 470 1.3E-224 T 13-10-2018 IPR016450 Uncharacterised conserved protein UCP005522 BEN78_02350 12259811f6466496b5921b8dd6aa6c7f 470 Gene3D G3DSA:3.30.1490.270 343 403 2.9E-26 T 13-10-2018 BEN78_02350 12259811f6466496b5921b8dd6aa6c7f 470 SUPERFAMILY SSF56059 14 461 1.71E-63 T 13-10-2018 BEN78_02670 34daa62a799ec8b87202a2917b5755cb 241 Pfam PF00072 Response regulator receiver domain 11 121 4.4E-18 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_02670 34daa62a799ec8b87202a2917b5755cb 241 Pfam PF00486 Transcriptional regulatory protein, C terminal 163 239 7.6E-11 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN78_02670 34daa62a799ec8b87202a2917b5755cb 241 SMART SM00862 163 239 3.6E-13 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN78_02670 34daa62a799ec8b87202a2917b5755cb 241 Gene3D G3DSA:3.40.50.2300 5 134 2.7E-26 T 13-10-2018 BEN78_02670 34daa62a799ec8b87202a2917b5755cb 241 SUPERFAMILY SSF52172 8 129 5.41E-28 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_02670 34daa62a799ec8b87202a2917b5755cb 241 Gene3D G3DSA:1.10.10.10 146 240 1.6E-16 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_02670 34daa62a799ec8b87202a2917b5755cb 241 SMART SM00448 9 121 1.2E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_02670 34daa62a799ec8b87202a2917b5755cb 241 SUPERFAMILY SSF46894 149 240 9.35E-14 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BEN78_07315 1c7875c89cae3f4bbb7d9a66246e5be6 90 Pfam PF01476 LysM domain 40 88 6.9E-13 T 13-10-2018 IPR018392 LysM domain BEN78_07315 1c7875c89cae3f4bbb7d9a66246e5be6 90 SMART SM00257 39 88 2.7E-10 T 13-10-2018 IPR018392 LysM domain BEN78_07315 1c7875c89cae3f4bbb7d9a66246e5be6 90 Gene3D G3DSA:3.10.350.10 38 86 6.5E-16 T 13-10-2018 IPR036779 LysM domain superfamily BEN78_07315 1c7875c89cae3f4bbb7d9a66246e5be6 90 SUPERFAMILY SSF54106 38 88 2.49E-8 T 13-10-2018 BEN78_16635 16e2ae97b7828391a36754a6242e4556 107 Gene3D G3DSA:1.25.40.10 1 106 2.0E-21 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_16635 16e2ae97b7828391a36754a6242e4556 107 Pfam PF14559 Tetratricopeptide repeat 27 80 1.4E-7 T 13-10-2018 BEN78_16635 16e2ae97b7828391a36754a6242e4556 107 SMART SM00028 50 83 22.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN78_16635 16e2ae97b7828391a36754a6242e4556 107 SMART SM00028 16 49 13.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN78_16635 16e2ae97b7828391a36754a6242e4556 107 SUPERFAMILY SSF48452 5 101 3.08E-13 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_03070 34fa0c986da733620934364420a3b58e 1027 Pfam PF13620 Carboxypeptidase regulatory-like domain 38 105 3.5E-9 T 13-10-2018 BEN78_03070 34fa0c986da733620934364420a3b58e 1027 Gene3D G3DSA:2.60.40.10 39 144 4.2E-5 T 13-10-2018 IPR013783 Immunoglobulin-like fold BEN78_03070 34fa0c986da733620934364420a3b58e 1027 Pfam PF00593 TonB dependent receptor 455 995 4.3E-12 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_03070 34fa0c986da733620934364420a3b58e 1027 SUPERFAMILY SSF56935 125 1027 6.96E-58 T 13-10-2018 BEN78_03070 34fa0c986da733620934364420a3b58e 1027 SUPERFAMILY SSF49452 30 105 3.53E-8 T 13-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 BEN78_15355 6615c9c1ace01bb5b1b7ca29550a8b1a 415 Pfam PF05977 Transmembrane secretion effector 12 410 1.7E-38 T 13-10-2018 IPR010290 Transmembrane secretion effector BEN78_15355 6615c9c1ace01bb5b1b7ca29550a8b1a 415 SUPERFAMILY SSF103473 18 414 2.62E-37 T 13-10-2018 IPR036259 MFS transporter superfamily BEN78_15355 6615c9c1ace01bb5b1b7ca29550a8b1a 415 Gene3D G3DSA:1.20.1250.20 20 401 7.6E-30 T 13-10-2018 BEN78_13710 70e1d04b90c60ecf3d73e2bbb465ae93 188 SUPERFAMILY SSF50249 131 187 1.44E-14 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN78_13710 70e1d04b90c60ecf3d73e2bbb465ae93 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 2.7E-19 T 13-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 BEN78_13710 70e1d04b90c60ecf3d73e2bbb465ae93 188 Gene3D G3DSA:2.40.50.140 66 128 4.3E-16 T 13-10-2018 BEN78_13710 70e1d04b90c60ecf3d73e2bbb465ae93 188 SMART SM00841 131 186 2.5E-22 T 13-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 BEN78_13710 70e1d04b90c60ecf3d73e2bbb465ae93 188 SUPERFAMILY SSF50249 67 128 9.0E-12 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN78_13710 70e1d04b90c60ecf3d73e2bbb465ae93 188 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 1 187 38.094 T 13-10-2018 IPR011897 Translation elongation factor P-like, YeiP BEN78_13710 70e1d04b90c60ecf3d73e2bbb465ae93 188 SUPERFAMILY SSF50104 2 63 1.87E-8 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily BEN78_13710 70e1d04b90c60ecf3d73e2bbb465ae93 188 Gene3D G3DSA:2.40.50.140 130 187 4.3E-20 T 13-10-2018 BEN78_13710 70e1d04b90c60ecf3d73e2bbb465ae93 188 SMART SM01185 68 123 1.8E-17 T 13-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 BEN78_13710 70e1d04b90c60ecf3d73e2bbb465ae93 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 69 123 2.0E-14 T 13-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 BEN78_13710 70e1d04b90c60ecf3d73e2bbb465ae93 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 13-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site BEN78_13710 70e1d04b90c60ecf3d73e2bbb465ae93 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 4.2E-11 T 13-10-2018 IPR013185 Translation elongation factor, KOW-like BEN78_13710 70e1d04b90c60ecf3d73e2bbb465ae93 188 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 2 187 7.5E-84 T 13-10-2018 IPR011897 Translation elongation factor P-like, YeiP BEN78_13710 70e1d04b90c60ecf3d73e2bbb465ae93 188 Gene3D G3DSA:2.30.30.30 1 63 1.4E-7 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 BEN78_13710 70e1d04b90c60ecf3d73e2bbb465ae93 188 PIRSF PIRSF005901 1 188 7.4E-61 T 13-10-2018 IPR020599 Translation elongation factor P/YeiP BEN78_10800 2868a8323cdf19c68dec79e1e86a0e89 263 SUPERFAMILY SSF53474 37 259 2.09E-37 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_10800 2868a8323cdf19c68dec79e1e86a0e89 263 Pfam PF00326 Prolyl oligopeptidase family 116 258 2.2E-13 T 13-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 BEN78_10800 2868a8323cdf19c68dec79e1e86a0e89 263 Gene3D G3DSA:3.40.50.1820 19 263 2.1E-60 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_00455 9ddd12623d63b7eba3bf3f1ce16a9419 285 Gene3D G3DSA:3.40.50.150 1 285 4.2E-94 T 13-10-2018 BEN78_00455 9ddd12623d63b7eba3bf3f1ce16a9419 285 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 1 271 37.566 T 13-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 BEN78_00455 9ddd12623d63b7eba3bf3f1ce16a9419 285 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 34 281 2.0E-76 T 13-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 BEN78_00455 9ddd12623d63b7eba3bf3f1ce16a9419 285 SUPERFAMILY SSF53335 8 281 1.96E-76 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_10720 4df45b9b44835c8cd509fdbb4d40f5a0 202 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 2 202 33.185 T 13-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 BEN78_10720 4df45b9b44835c8cd509fdbb4d40f5a0 202 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 171 184 - T 13-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 BEN78_10720 4df45b9b44835c8cd509fdbb4d40f5a0 202 SUPERFAMILY SSF50475 7 202 5.8E-59 T 13-10-2018 BEN78_10720 4df45b9b44835c8cd509fdbb4d40f5a0 202 PIRSF PIRSF000190 6 202 5.5E-60 T 13-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 BEN78_10720 4df45b9b44835c8cd509fdbb4d40f5a0 202 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 24 108 2.5E-23 T 13-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 BEN78_10720 4df45b9b44835c8cd509fdbb4d40f5a0 202 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 9 198 5.8E-60 T 13-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 BEN78_10720 4df45b9b44835c8cd509fdbb4d40f5a0 202 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 161 198 8.1E-10 T 13-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 BEN78_10720 4df45b9b44835c8cd509fdbb4d40f5a0 202 Gene3D G3DSA:2.30.110.10 5 194 2.5E-68 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 BEN78_03960 54d7efd78818194ab9f7b93d61b9a856 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 1.3E-256 T 13-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 BEN78_03960 54d7efd78818194ab9f7b93d61b9a856 610 SUPERFAMILY SSF53697 245 610 3.34E-109 T 13-10-2018 BEN78_03960 54d7efd78818194ab9f7b93d61b9a856 610 Gene3D G3DSA:3.40.50.10490 249 609 2.5E-140 T 13-10-2018 BEN78_03960 54d7efd78818194ab9f7b93d61b9a856 610 Pfam PF13522 Glutamine amidotransferase domain 64 192 3.5E-22 T 13-10-2018 BEN78_03960 54d7efd78818194ab9f7b93d61b9a856 610 Gene3D G3DSA:3.60.20.10 2 240 1.0E-77 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BEN78_03960 54d7efd78818194ab9f7b93d61b9a856 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 39.3 T 13-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 BEN78_03960 54d7efd78818194ab9f7b93d61b9a856 610 Gene3D G3DSA:3.40.50.10490 448 595 2.5E-140 T 13-10-2018 BEN78_03960 54d7efd78818194ab9f7b93d61b9a856 610 SUPERFAMILY SSF56235 2 232 5.49E-72 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BEN78_03960 54d7efd78818194ab9f7b93d61b9a856 610 Pfam PF01380 SIS domain 296 417 7.5E-27 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BEN78_03960 54d7efd78818194ab9f7b93d61b9a856 610 Pfam PF01380 SIS domain 464 592 1.3E-26 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BEN78_00575 0d01e4786014495e149564bc70ab7e34 392 SUPERFAMILY SSF81901 44 286 2.88E-18 T 13-10-2018 BEN78_00575 0d01e4786014495e149564bc70ab7e34 392 Gene3D G3DSA:1.25.40.10 37 176 2.5E-18 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_00575 0d01e4786014495e149564bc70ab7e34 392 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 9 390 35.139 T 13-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 BEN78_00575 0d01e4786014495e149564bc70ab7e34 392 Gene3D G3DSA:1.25.40.10 177 363 5.0E-11 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_00575 0d01e4786014495e149564bc70ab7e34 392 Pfam PF13432 Tetratricopeptide repeat 116 177 0.0017 T 13-10-2018 BEN78_00575 0d01e4786014495e149564bc70ab7e34 392 Pfam PF13432 Tetratricopeptide repeat 190 251 8.6E-5 T 13-10-2018 BEN78_03020 1d25e250b4314949687c99d989981cce 314 Pfam PF02911 Formyl transferase, C-terminal domain 203 299 7.2E-24 T 13-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BEN78_03020 1d25e250b4314949687c99d989981cce 314 Gene3D G3DSA:3.40.50.170 1 205 1.5E-73 T 13-10-2018 BEN78_03020 1d25e250b4314949687c99d989981cce 314 Pfam PF00551 Formyl transferase 2 176 5.4E-43 T 13-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BEN78_03020 1d25e250b4314949687c99d989981cce 314 SUPERFAMILY SSF53328 1 206 5.23E-61 T 13-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BEN78_03020 1d25e250b4314949687c99d989981cce 314 SUPERFAMILY SSF50486 204 302 6.47E-29 T 13-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 BEN78_03020 1d25e250b4314949687c99d989981cce 314 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 131 154 - T 13-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BEN78_03020 1d25e250b4314949687c99d989981cce 314 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 303 36.162 T 13-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 BEN78_03020 1d25e250b4314949687c99d989981cce 314 Gene3D G3DSA:3.10.25.10 206 307 8.8E-26 T 13-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BEN78_03020 1d25e250b4314949687c99d989981cce 314 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 302 1.9E-86 T 13-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 BEN78_07105 500e6347aa02797a0ff48d9c15a60911 329 PRINTS PR00839 V8 serine protease family signature 156 173 1.8E-22 T 13-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 BEN78_07105 500e6347aa02797a0ff48d9c15a60911 329 PRINTS PR00839 V8 serine protease family signature 135 152 1.8E-22 T 13-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 BEN78_07105 500e6347aa02797a0ff48d9c15a60911 329 PRINTS PR00839 V8 serine protease family signature 241 254 1.8E-22 T 13-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 BEN78_07105 500e6347aa02797a0ff48d9c15a60911 329 PRINTS PR00839 V8 serine protease family signature 291 303 1.8E-22 T 13-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 BEN78_07105 500e6347aa02797a0ff48d9c15a60911 329 PRINTS PR00839 V8 serine protease family signature 274 290 1.8E-22 T 13-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 BEN78_07105 500e6347aa02797a0ff48d9c15a60911 329 ProSitePatterns PS00673 Serine proteases, V8 family, serine active site. 280 290 - T 13-10-2018 IPR000126 Serine proteases, V8 family, serine active site GO:0006508|GO:0008236 BEN78_07105 500e6347aa02797a0ff48d9c15a60911 329 Pfam PF00089 Trypsin 150 325 8.0E-9 T 13-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 BEN78_07105 500e6347aa02797a0ff48d9c15a60911 329 Gene3D G3DSA:2.40.10.10 145 235 6.7E-46 T 13-10-2018 BEN78_07105 500e6347aa02797a0ff48d9c15a60911 329 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 167 172 - T 13-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 BEN78_07105 500e6347aa02797a0ff48d9c15a60911 329 SUPERFAMILY SSF50494 124 325 5.91E-29 T 13-10-2018 IPR009003 Peptidase S1, PA clan BEN78_07105 500e6347aa02797a0ff48d9c15a60911 329 Gene3D G3DSA:2.40.10.10 130 304 6.7E-46 T 13-10-2018 BEN78_15585 9f6abfb6b2c6981b72549045dec54345 137 SUPERFAMILY SSF81343 22 133 1.85E-27 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BEN78_15585 9f6abfb6b2c6981b72549045dec54345 137 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 15 116 3.6E-15 T 13-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BEN78_15585 9f6abfb6b2c6981b72549045dec54345 137 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 28 130 5.1E-28 T 13-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 BEN78_15585 9f6abfb6b2c6981b72549045dec54345 137 Gene3D G3DSA:1.20.1300.10 22 133 7.1E-27 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BEN78_13820 78fc74f1b407cd116bceb5e7a91538aa 208 SUPERFAMILY SSF88946 14 113 3.3E-29 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BEN78_13820 78fc74f1b407cd116bceb5e7a91538aa 208 SUPERFAMILY SSF88659 130 192 1.07E-17 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN78_13820 78fc74f1b407cd116bceb5e7a91538aa 208 Gene3D G3DSA:1.10.1740.10 11 128 1.7E-40 T 13-10-2018 BEN78_13820 78fc74f1b407cd116bceb5e7a91538aa 208 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 28 192 2.3E-31 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BEN78_13820 78fc74f1b407cd116bceb5e7a91538aa 208 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 12 197 1.5E-102 T 13-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BEN78_13820 78fc74f1b407cd116bceb5e7a91538aa 208 Gene3D G3DSA:1.10.10.10 129 199 7.1E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_13820 78fc74f1b407cd116bceb5e7a91538aa 208 Pfam PF04542 Sigma-70 region 2 32 99 6.5E-17 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BEN78_13820 78fc74f1b407cd116bceb5e7a91538aa 208 Pfam PF08281 Sigma-70, region 4 138 188 3.7E-18 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BEN78_11250 a01db993fcf48028395f0d33b6ae79cc 399 SUPERFAMILY SSF53383 2 397 5.36E-95 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_11250 a01db993fcf48028395f0d33b6ae79cc 399 Gene3D G3DSA:3.90.1150.10 26 391 2.5E-105 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN78_11250 a01db993fcf48028395f0d33b6ae79cc 399 Gene3D G3DSA:3.40.640.10 63 286 2.5E-105 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN78_11250 a01db993fcf48028395f0d33b6ae79cc 399 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 13-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 BEN78_11250 a01db993fcf48028395f0d33b6ae79cc 399 Pfam PF00155 Aminotransferase class I and II 32 386 8.4E-55 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BEN78_11315 4561d78930c727c8dd9425ffddeefc94 352 Gene3D G3DSA:3.20.20.100 1 343 1.3E-134 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BEN78_11315 4561d78930c727c8dd9425ffddeefc94 352 Pfam PF00248 Aldo/keto reductase family 16 318 8.6E-63 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain BEN78_11315 4561d78930c727c8dd9425ffddeefc94 352 SUPERFAMILY SSF51430 1 318 1.18E-93 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BEN78_05535 866e7705ef6fbcfbf2b6a7baefefe7ce 199 Gene3D G3DSA:1.10.10.10 135 199 2.6E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_05535 866e7705ef6fbcfbf2b6a7baefefe7ce 199 SMART SM00448 5 119 6.5E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_05535 866e7705ef6fbcfbf2b6a7baefefe7ce 199 SMART SM00421 138 195 1.9E-19 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_05535 866e7705ef6fbcfbf2b6a7baefefe7ce 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 183 3.8E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_05535 866e7705ef6fbcfbf2b6a7baefefe7ce 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 141 155 3.8E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_05535 866e7705ef6fbcfbf2b6a7baefefe7ce 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 171 3.8E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_05535 866e7705ef6fbcfbf2b6a7baefefe7ce 199 Gene3D G3DSA:3.40.50.2300 2 132 1.5E-45 T 13-10-2018 BEN78_05535 866e7705ef6fbcfbf2b6a7baefefe7ce 199 SUPERFAMILY SSF46894 130 199 2.07E-19 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BEN78_05535 866e7705ef6fbcfbf2b6a7baefefe7ce 199 SUPERFAMILY SSF52172 5 133 1.18E-29 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_05535 866e7705ef6fbcfbf2b6a7baefefe7ce 199 Pfam PF00072 Response regulator receiver domain 7 119 5.2E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_05535 866e7705ef6fbcfbf2b6a7baefefe7ce 199 Pfam PF00196 Bacterial regulatory proteins, luxR family 140 195 7.3E-20 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_04185 a5a178c1d4b55c9772dc39abaa6fe71c 196 Pfam PF07209 Protein of unknown function (DUF1415) 25 191 3.8E-68 T 13-10-2018 IPR009858 Protein of unknown function DUF1415 BEN78_10475 cae31717b441eabfb4c7179375a3b700 773 Pfam PF00801 PKD domain 489 546 4.0E-11 T 13-10-2018 IPR000601 PKD domain BEN78_10475 cae31717b441eabfb4c7179375a3b700 773 SUPERFAMILY SSF50494 207 463 1.33E-44 T 13-10-2018 IPR009003 Peptidase S1, PA clan BEN78_10475 cae31717b441eabfb4c7179375a3b700 773 SMART SM00089 477 557 1.1E-18 T 13-10-2018 IPR022409 PKD/Chitinase domain BEN78_10475 cae31717b441eabfb4c7179375a3b700 773 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 692 759 2.0E-14 T 13-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial BEN78_10475 cae31717b441eabfb4c7179375a3b700 773 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 581 647 1.1E-8 T 13-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial BEN78_10475 cae31717b441eabfb4c7179375a3b700 773 SUPERFAMILY SSF49299 475 554 2.09E-19 T 13-10-2018 IPR035986 PKD domain superfamily BEN78_10475 cae31717b441eabfb4c7179375a3b700 773 Gene3D G3DSA:2.40.10.10 230 463 2.9E-90 T 13-10-2018 BEN78_10475 cae31717b441eabfb4c7179375a3b700 773 Gene3D G3DSA:2.60.120.380 673 773 1.4E-40 T 13-10-2018 BEN78_10475 cae31717b441eabfb4c7179375a3b700 773 Gene3D G3DSA:2.60.120.380 562 663 2.0E-25 T 13-10-2018 BEN78_10475 cae31717b441eabfb4c7179375a3b700 773 Gene3D G3DSA:2.60.40.10 471 557 3.7E-22 T 13-10-2018 IPR013783 Immunoglobulin-like fold BEN78_10475 cae31717b441eabfb4c7179375a3b700 773 Gene3D G3DSA:2.40.10.10 208 436 2.9E-90 T 13-10-2018 BEN78_08950 52b414a8ad63af69252a3855d0e2237e 729 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 244 322 9.9E-11 T 13-10-2018 IPR001478 PDZ domain GO:0005515 BEN78_08950 52b414a8ad63af69252a3855d0e2237e 729 SUPERFAMILY SSF50156 248 323 4.85E-11 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 BEN78_08950 52b414a8ad63af69252a3855d0e2237e 729 Gene3D G3DSA:2.30.42.10 238 323 1.3E-11 T 13-10-2018 BEN78_08950 52b414a8ad63af69252a3855d0e2237e 729 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 209 570 3.7E-90 T 13-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 BEN78_08950 52b414a8ad63af69252a3855d0e2237e 729 Gene3D G3DSA:3.90.226.10 335 570 1.4E-61 T 13-10-2018 BEN78_08950 52b414a8ad63af69252a3855d0e2237e 729 SMART SM00228 248 326 5.4E-9 T 13-10-2018 IPR001478 PDZ domain GO:0005515 BEN78_08950 52b414a8ad63af69252a3855d0e2237e 729 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 554 704 1.7E-38 T 13-10-2018 IPR020992 Tail specific protease, C-terminal BEN78_08950 52b414a8ad63af69252a3855d0e2237e 729 SMART SM00245 331 551 2.7E-55 T 13-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 BEN78_08950 52b414a8ad63af69252a3855d0e2237e 729 Pfam PF03572 Peptidase family S41 367 549 1.1E-52 T 13-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 BEN78_08950 52b414a8ad63af69252a3855d0e2237e 729 SUPERFAMILY SSF52096 170 556 2.15E-68 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BEN78_11425 cbcc545b7e7652f7ebd46eb9f75001b6 756 Pfam PF00593 TonB dependent receptor 358 754 3.1E-37 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_11425 cbcc545b7e7652f7ebd46eb9f75001b6 756 Gene3D G3DSA:2.40.170.20 181 756 2.9E-52 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_11425 cbcc545b7e7652f7ebd46eb9f75001b6 756 Gene3D G3DSA:2.170.130.10 61 178 6.9E-25 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_11425 cbcc545b7e7652f7ebd46eb9f75001b6 756 SUPERFAMILY SSF56935 51 756 9.42E-85 T 13-10-2018 BEN78_11425 cbcc545b7e7652f7ebd46eb9f75001b6 756 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 169 7.2E-17 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_06225 9cc551affa5c3ae1b28af0e2434f24c0 725 PRINTS PR00133 Glycosyl hydrolase family 3 signature 184 200 4.4E-19 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BEN78_06225 9cc551affa5c3ae1b28af0e2434f24c0 725 PRINTS PR00133 Glycosyl hydrolase family 3 signature 82 98 4.4E-19 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BEN78_06225 9cc551affa5c3ae1b28af0e2434f24c0 725 PRINTS PR00133 Glycosyl hydrolase family 3 signature 254 272 4.4E-19 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BEN78_06225 9cc551affa5c3ae1b28af0e2434f24c0 725 PRINTS PR00133 Glycosyl hydrolase family 3 signature 147 163 4.4E-19 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BEN78_06225 9cc551affa5c3ae1b28af0e2434f24c0 725 PRINTS PR00133 Glycosyl hydrolase family 3 signature 101 120 4.4E-19 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BEN78_06225 9cc551affa5c3ae1b28af0e2434f24c0 725 SMART SM01217 643 712 2.0E-28 T 13-10-2018 IPR026891 Fibronectin type III-like domain BEN78_06225 9cc551affa5c3ae1b28af0e2434f24c0 725 Gene3D G3DSA:3.20.20.300 4 354 2.3E-116 T 13-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 BEN78_06225 9cc551affa5c3ae1b28af0e2434f24c0 725 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 15 332 2.6E-70 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BEN78_06225 9cc551affa5c3ae1b28af0e2434f24c0 725 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 373 606 1.9E-54 T 13-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 BEN78_06225 9cc551affa5c3ae1b28af0e2434f24c0 725 SUPERFAMILY SSF51445 3 372 1.16E-100 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily BEN78_06225 9cc551affa5c3ae1b28af0e2434f24c0 725 Gene3D G3DSA:2.60.40.10 609 721 4.1E-30 T 13-10-2018 IPR013783 Immunoglobulin-like fold BEN78_06225 9cc551affa5c3ae1b28af0e2434f24c0 725 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 254 271 - T 13-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 BEN78_06225 9cc551affa5c3ae1b28af0e2434f24c0 725 SUPERFAMILY SSF52279 373 609 4.58E-53 T 13-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 BEN78_06225 9cc551affa5c3ae1b28af0e2434f24c0 725 Gene3D G3DSA:3.40.50.1700 360 608 1.1E-77 T 13-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 BEN78_06225 9cc551affa5c3ae1b28af0e2434f24c0 725 Pfam PF14310 Fibronectin type III-like domain 643 709 2.5E-18 T 13-10-2018 IPR026891 Fibronectin type III-like domain BEN78_14970 7fb554173cd61efeaf24f8f7566775ac 303 Pfam PF03466 LysR substrate binding domain 94 297 1.5E-43 T 13-10-2018 IPR005119 LysR, substrate-binding BEN78_14970 7fb554173cd61efeaf24f8f7566775ac 303 Gene3D G3DSA:1.10.10.10 8 89 6.9E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_14970 7fb554173cd61efeaf24f8f7566775ac 303 Gene3D G3DSA:3.40.190.10 169 274 4.6E-47 T 13-10-2018 BEN78_14970 7fb554173cd61efeaf24f8f7566775ac 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 2.4E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_14970 7fb554173cd61efeaf24f8f7566775ac 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 2.4E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_14970 7fb554173cd61efeaf24f8f7566775ac 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 2.4E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_14970 7fb554173cd61efeaf24f8f7566775ac 303 SUPERFAMILY SSF53850 94 297 4.5E-37 T 13-10-2018 BEN78_14970 7fb554173cd61efeaf24f8f7566775ac 303 SUPERFAMILY SSF46785 7 117 1.36E-24 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_14970 7fb554173cd61efeaf24f8f7566775ac 303 Gene3D G3DSA:3.40.190.10 97 296 4.6E-47 T 13-10-2018 BEN78_14970 7fb554173cd61efeaf24f8f7566775ac 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 5.5E-19 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_03090 f98a02ea70065f0e0e1b45b357d2fec2 370 Gene3D G3DSA:3.40.50.1110 24 243 3.2E-64 T 13-10-2018 IPR036514 SGNH hydrolase superfamily BEN78_03090 f98a02ea70065f0e0e1b45b357d2fec2 370 Gene3D G3DSA:2.60.120.10 253 367 8.4E-19 T 13-10-2018 IPR014710 RmlC-like jelly roll fold BEN78_03090 f98a02ea70065f0e0e1b45b357d2fec2 370 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 29 216 2.3E-17 T 13-10-2018 IPR013830 SGNH hydrolase-type esterase domain BEN78_03090 f98a02ea70065f0e0e1b45b357d2fec2 370 SUPERFAMILY SSF52266 25 228 4.33E-53 T 13-10-2018 BEN78_03090 f98a02ea70065f0e0e1b45b357d2fec2 370 Pfam PF07883 Cupin domain 300 365 4.5E-13 T 13-10-2018 IPR013096 Cupin 2, conserved barrel BEN78_03090 f98a02ea70065f0e0e1b45b357d2fec2 370 SUPERFAMILY SSF51182 266 367 7.34E-20 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily BEN78_15270 3233881cb8a94806b64b91d3b1ead4a3 376 Gene3D G3DSA:3.40.50.720 113 363 6.4E-90 T 13-10-2018 BEN78_15270 3233881cb8a94806b64b91d3b1ead4a3 376 SUPERFAMILY SSF52821 2 106 1.14E-25 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily BEN78_15270 3233881cb8a94806b64b91d3b1ead4a3 376 SMART SM00450 6 102 4.4E-12 T 13-10-2018 IPR001763 Rhodanese-like domain BEN78_15270 3233881cb8a94806b64b91d3b1ead4a3 376 Pfam PF00899 ThiF family 118 355 9.3E-66 T 13-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 BEN78_15270 3233881cb8a94806b64b91d3b1ead4a3 376 SUPERFAMILY SSF69572 115 360 1.83E-90 T 13-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 BEN78_15270 3233881cb8a94806b64b91d3b1ead4a3 376 Gene3D G3DSA:3.40.250.10 1 105 2.4E-21 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily BEN78_15270 3233881cb8a94806b64b91d3b1ead4a3 376 Pfam PF00581 Rhodanese-like domain 8 99 1.2E-7 T 13-10-2018 IPR001763 Rhodanese-like domain BEN78_12090 73430b60142d6fe9dbfc6d9c37cf1008 126 SUPERFAMILY SSF50692 1 121 1.99E-47 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily BEN78_12090 73430b60142d6fe9dbfc6d9c37cf1008 126 Gene3D G3DSA:2.40.40.20 1 126 3.2E-53 T 13-10-2018 BEN78_12090 73430b60142d6fe9dbfc6d9c37cf1008 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 69.467 T 13-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 BEN78_12090 73430b60142d6fe9dbfc6d9c37cf1008 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 125 2.4E-48 T 13-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 BEN78_12090 73430b60142d6fe9dbfc6d9c37cf1008 126 Pfam PF02261 Aspartate decarboxylase 1 114 1.8E-48 T 13-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 BEN78_12090 73430b60142d6fe9dbfc6d9c37cf1008 126 PIRSF PIRSF006246 1 125 9.7E-50 T 13-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 BEN78_12090 73430b60142d6fe9dbfc6d9c37cf1008 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 122 6.0E-33 T 13-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 BEN78_08020 79258672a7287dcbe876e31418d37c28 782 Gene3D G3DSA:2.70.98.10 36 381 2.4E-257 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 BEN78_08020 79258672a7287dcbe876e31418d37c28 782 Pfam PF07971 Glycosyl hydrolase family 92 276 758 1.3E-172 T 13-10-2018 IPR012939 Glycosyl hydrolase family 92 BEN78_08020 79258672a7287dcbe876e31418d37c28 782 SUPERFAMILY SSF48208 297 737 6.97E-28 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BEN78_08020 79258672a7287dcbe876e31418d37c28 782 Gene3D G3DSA:1.20.1610.10 474 634 2.4E-257 T 13-10-2018 BEN78_08020 79258672a7287dcbe876e31418d37c28 782 Gene3D G3DSA:3.30.2080.10 330 762 2.4E-257 T 13-10-2018 BEN78_08020 79258672a7287dcbe876e31418d37c28 782 Gene3D G3DSA:1.20.1050.60 382 473 2.4E-257 T 13-10-2018 BEN78_08020 79258672a7287dcbe876e31418d37c28 782 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 34 762 1.5E-203 T 13-10-2018 IPR005887 Alpha-1,2-mannosidase, putative BEN78_09455 09127890b15b4d6b428b3f384e96b8b8 174 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 1.9E-57 T 13-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 BEN78_09455 09127890b15b4d6b428b3f384e96b8b8 174 Pfam PF03477 ATP cone domain 51 136 4.0E-15 T 13-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 BEN78_09455 09127890b15b4d6b428b3f384e96b8b8 174 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 81.829 T 13-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 BEN78_07965 7b4df445cff50ffff0513aa12e4ae7ce 849 Gene3D G3DSA:3.40.50.1700 419 650 4.8E-66 T 13-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 BEN78_07965 7b4df445cff50ffff0513aa12e4ae7ce 849 Gene3D G3DSA:3.20.20.300 53 412 4.3E-121 T 13-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 BEN78_07965 7b4df445cff50ffff0513aa12e4ae7ce 849 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 433 647 2.0E-32 T 13-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 BEN78_07965 7b4df445cff50ffff0513aa12e4ae7ce 849 Gene3D G3DSA:2.60.120.430 690 848 3.7E-17 T 13-10-2018 BEN78_07965 7b4df445cff50ffff0513aa12e4ae7ce 849 SUPERFAMILY SSF51445 53 432 4.11E-101 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily BEN78_07965 7b4df445cff50ffff0513aa12e4ae7ce 849 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 68 392 2.1E-72 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BEN78_07965 7b4df445cff50ffff0513aa12e4ae7ce 849 PRINTS PR00133 Glycosyl hydrolase family 3 signature 158 177 9.7E-18 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BEN78_07965 7b4df445cff50ffff0513aa12e4ae7ce 849 PRINTS PR00133 Glycosyl hydrolase family 3 signature 315 333 9.7E-18 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BEN78_07965 7b4df445cff50ffff0513aa12e4ae7ce 849 PRINTS PR00133 Glycosyl hydrolase family 3 signature 245 261 9.7E-18 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BEN78_07965 7b4df445cff50ffff0513aa12e4ae7ce 849 PRINTS PR00133 Glycosyl hydrolase family 3 signature 134 150 9.7E-18 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BEN78_07965 7b4df445cff50ffff0513aa12e4ae7ce 849 PRINTS PR00133 Glycosyl hydrolase family 3 signature 204 220 9.7E-18 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BEN78_07965 7b4df445cff50ffff0513aa12e4ae7ce 849 SUPERFAMILY SSF52279 433 648 4.97E-47 T 13-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 BEN78_02365 add7adb3f31dddc9ab49080b7ea9d7b3 833 Gene3D G3DSA:3.40.50.1820 562 830 1.1E-50 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_02365 add7adb3f31dddc9ab49080b7ea9d7b3 833 Gene3D G3DSA:2.120.10.30 100 297 3.2E-14 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BEN78_02365 add7adb3f31dddc9ab49080b7ea9d7b3 833 Pfam PF00326 Prolyl oligopeptidase family 671 825 2.1E-23 T 13-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 BEN78_02365 add7adb3f31dddc9ab49080b7ea9d7b3 833 SUPERFAMILY SSF82171 111 502 4.45E-14 T 13-10-2018 BEN78_02365 add7adb3f31dddc9ab49080b7ea9d7b3 833 SUPERFAMILY SSF53474 566 824 1.79E-45 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_05425 021cb5a62e45451340965ed4cb63f60b 217 Gene3D G3DSA:1.10.10.10 1 93 5.0E-33 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_05425 021cb5a62e45451340965ed4cb63f60b 217 Hamap MF_01584 UPF0502 protein YceH [yceH]. 10 211 28.578 T 13-10-2018 IPR007432 Protein of unknown function DUF480 BEN78_05425 021cb5a62e45451340965ed4cb63f60b 217 Gene3D G3DSA:1.10.10.10 94 171 4.8E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_05425 021cb5a62e45451340965ed4cb63f60b 217 Pfam PF04337 Protein of unknown function, DUF480 10 153 3.2E-51 T 13-10-2018 IPR007432 Protein of unknown function DUF480 BEN78_05425 021cb5a62e45451340965ed4cb63f60b 217 SUPERFAMILY SSF46785 91 170 5.64E-24 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_05425 021cb5a62e45451340965ed4cb63f60b 217 SUPERFAMILY SSF46785 6 86 1.52E-26 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_08000 1d202d427644da0bc3f6b303a7d506a9 429 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 38 414 3.4E-99 T 13-10-2018 BEN78_08000 1d202d427644da0bc3f6b303a7d506a9 429 SUPERFAMILY SSF48208 10 423 1.39E-102 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BEN78_08000 1d202d427644da0bc3f6b303a7d506a9 429 Gene3D G3DSA:1.50.10.10 8 429 1.4E-136 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 BEN78_14315 b3420eba48bdd40945f08e2cb8ca2d72 258 SUPERFAMILY SSF161098 53 237 9.68E-28 T 13-10-2018 IPR035906 MetI-like superfamily BEN78_14315 b3420eba48bdd40945f08e2cb8ca2d72 258 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 245 1.8E-21 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN78_14315 b3420eba48bdd40945f08e2cb8ca2d72 258 Gene3D G3DSA:1.10.3720.10 45 245 1.1E-21 T 13-10-2018 IPR035906 MetI-like superfamily BEN78_03050 a7797b94b3fa5ee2708103e29d76937d 855 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 676 53.231 T 13-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 BEN78_03050 a7797b94b3fa5ee2708103e29d76937d 855 SMART SM00493 3 103 3.1E-30 T 13-10-2018 IPR006171 TOPRIM domain BEN78_03050 a7797b94b3fa5ee2708103e29d76937d 855 Gene3D G3DSA:1.10.290.10 260 396 4.3E-167 T 13-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 BEN78_03050 a7797b94b3fa5ee2708103e29d76937d 855 Gene3D G3DSA:2.70.20.10 188 472 4.3E-167 T 13-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 BEN78_03050 a7797b94b3fa5ee2708103e29d76937d 855 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 289 312 - T 13-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 BEN78_03050 a7797b94b3fa5ee2708103e29d76937d 855 SUPERFAMILY SSF56712 3 602 1.57E-183 T 13-10-2018 IPR023405 DNA topoisomerase, type IA, core domain BEN78_03050 a7797b94b3fa5ee2708103e29d76937d 855 SMART SM00437 252 525 1.2E-108 T 13-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 BEN78_03050 a7797b94b3fa5ee2708103e29d76937d 855 Gene3D G3DSA:1.10.460.10 139 565 4.3E-167 T 13-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 BEN78_03050 a7797b94b3fa5ee2708103e29d76937d 855 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 303 312 1.7E-37 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BEN78_03050 a7797b94b3fa5ee2708103e29d76937d 855 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 381 397 1.7E-37 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BEN78_03050 a7797b94b3fa5ee2708103e29d76937d 855 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 488 502 1.7E-37 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BEN78_03050 a7797b94b3fa5ee2708103e29d76937d 855 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 166 184 1.7E-37 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BEN78_03050 a7797b94b3fa5ee2708103e29d76937d 855 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 1.7E-37 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BEN78_03050 a7797b94b3fa5ee2708103e29d76937d 855 Pfam PF13368 Topoisomerase C-terminal repeat 716 762 2.8E-12 T 13-10-2018 IPR025589 Topoisomerase C-terminal repeat BEN78_03050 a7797b94b3fa5ee2708103e29d76937d 855 Pfam PF13368 Topoisomerase C-terminal repeat 594 655 1.7E-14 T 13-10-2018 IPR025589 Topoisomerase C-terminal repeat BEN78_03050 a7797b94b3fa5ee2708103e29d76937d 855 Pfam PF13368 Topoisomerase C-terminal repeat 658 705 2.8E-13 T 13-10-2018 IPR025589 Topoisomerase C-terminal repeat BEN78_03050 a7797b94b3fa5ee2708103e29d76937d 855 Pfam PF01751 Toprim domain 5 117 7.5E-25 T 13-10-2018 IPR006171 TOPRIM domain BEN78_03050 a7797b94b3fa5ee2708103e29d76937d 855 Gene3D G3DSA:3.40.50.140 1 138 8.2E-49 T 13-10-2018 BEN78_03050 a7797b94b3fa5ee2708103e29d76937d 855 SMART SM00436 108 196 9.8E-46 T 13-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 BEN78_03050 a7797b94b3fa5ee2708103e29d76937d 855 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 615 1.8E-223 T 13-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 BEN78_03050 a7797b94b3fa5ee2708103e29d76937d 855 Pfam PF01131 DNA topoisomerase 134 562 2.1E-127 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BEN78_11155 3360644be21b2b112dd3794741e00a02 131 SUPERFAMILY SSF56047 2 130 4.84E-46 T 13-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11155 3360644be21b2b112dd3794741e00a02 131 ProSitePatterns PS00053 Ribosomal protein S8 signature. 101 118 - T 13-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11155 3360644be21b2b112dd3794741e00a02 131 Gene3D G3DSA:3.30.1490.10 75 130 3.8E-22 T 13-10-2018 BEN78_11155 3360644be21b2b112dd3794741e00a02 131 Pfam PF00410 Ribosomal protein S8 5 130 4.1E-48 T 13-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11155 3360644be21b2b112dd3794741e00a02 131 Gene3D G3DSA:3.30.1370.30 2 73 1.0E-27 T 13-10-2018 BEN78_11155 3360644be21b2b112dd3794741e00a02 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 131 30.607 T 13-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_16350 b01272829ae1241382693154a5bf0816 163 Gene3D G3DSA:1.10.10.10 4 63 1.3E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_16350 b01272829ae1241382693154a5bf0816 163 SUPERFAMILY SSF46785 12 70 1.48E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_16350 b01272829ae1241382693154a5bf0816 163 SMART SM00344 12 121 1.7E-44 T 13-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 BEN78_16350 b01272829ae1241382693154a5bf0816 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 2.1E-20 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BEN78_16350 b01272829ae1241382693154a5bf0816 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 2.1E-20 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BEN78_16350 b01272829ae1241382693154a5bf0816 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 2.1E-20 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BEN78_16350 b01272829ae1241382693154a5bf0816 163 Gene3D G3DSA:3.30.70.920 64 158 4.4E-21 T 13-10-2018 BEN78_16350 b01272829ae1241382693154a5bf0816 163 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 13-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site BEN78_16350 b01272829ae1241382693154a5bf0816 163 SUPERFAMILY SSF54909 73 159 2.82E-19 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel BEN78_16350 b01272829ae1241382693154a5bf0816 163 Pfam PF13404 AsnC-type helix-turn-helix domain 12 53 4.3E-20 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BEN78_16350 b01272829ae1241382693154a5bf0816 163 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 1.8E-19 T 13-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BEN78_01585 b989469c4e739d93da07020e834ca82e 353 Gene3D G3DSA:1.10.260.40 13 68 1.9E-22 T 13-10-2018 BEN78_01585 b989469c4e739d93da07020e834ca82e 353 Pfam PF00356 Bacterial regulatory proteins, lacI family 16 61 4.7E-21 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN78_01585 b989469c4e739d93da07020e834ca82e 353 Gene3D G3DSA:3.40.50.2300 174 303 1.8E-69 T 13-10-2018 BEN78_01585 b989469c4e739d93da07020e834ca82e 353 SMART SM00354 14 84 2.2E-26 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN78_01585 b989469c4e739d93da07020e834ca82e 353 ProSitePatterns PS00356 LacI-type HTH domain signature. 17 35 - T 13-10-2018 BEN78_01585 b989469c4e739d93da07020e834ca82e 353 SUPERFAMILY SSF53822 75 351 2.21E-70 T 13-10-2018 IPR028082 Periplasmic binding protein-like I BEN78_01585 b989469c4e739d93da07020e834ca82e 353 Pfam PF13377 Periplasmic binding protein-like domain 182 346 2.1E-40 T 13-10-2018 BEN78_01585 b989469c4e739d93da07020e834ca82e 353 SUPERFAMILY SSF47413 15 69 7.66E-18 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN78_01585 b989469c4e739d93da07020e834ca82e 353 Gene3D G3DSA:3.40.50.2300 69 319 1.8E-69 T 13-10-2018 BEN78_14750 be4166e4b1b09a2d8caa9a9bfde15b9e 792 Gene3D G3DSA:3.40.50.300 398 700 6.5E-120 T 13-10-2018 BEN78_14750 be4166e4b1b09a2d8caa9a9bfde15b9e 792 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 33 210 4.1E-37 T 13-10-2018 IPR025199 DNA translocase FtsK, 4TM region BEN78_14750 be4166e4b1b09a2d8caa9a9bfde15b9e 792 Pfam PF09397 Ftsk gamma domain 727 787 8.5E-27 T 13-10-2018 IPR018541 FtsK gamma domain BEN78_14750 be4166e4b1b09a2d8caa9a9bfde15b9e 792 Pfam PF01580 FtsK/SpoIIIE family 401 614 5.9E-65 T 13-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 BEN78_14750 be4166e4b1b09a2d8caa9a9bfde15b9e 792 SMART SM00382 436 635 0.0022 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_14750 be4166e4b1b09a2d8caa9a9bfde15b9e 792 Gene3D G3DSA:1.10.10.10 721 786 5.4E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_14750 be4166e4b1b09a2d8caa9a9bfde15b9e 792 SUPERFAMILY SSF52540 374 686 2.9E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_14750 be4166e4b1b09a2d8caa9a9bfde15b9e 792 Gene3D G3DSA:3.30.980.40 293 397 3.0E-32 T 13-10-2018 BEN78_14750 be4166e4b1b09a2d8caa9a9bfde15b9e 792 SUPERFAMILY SSF46785 725 790 1.33E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_14750 be4166e4b1b09a2d8caa9a9bfde15b9e 792 SMART SM00843 725 790 8.8E-40 T 13-10-2018 IPR018541 FtsK gamma domain BEN78_00400 c3ce4cf3795b4724d6ac3cdf0ec397f7 82 Pfam PF00462 Glutaredoxin 1 58 1.2E-15 T 13-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 BEN78_00400 c3ce4cf3795b4724d6ac3cdf0ec397f7 82 Gene3D G3DSA:3.40.30.10 1 80 1.3E-21 T 13-10-2018 BEN78_00400 c3ce4cf3795b4724d6ac3cdf0ec397f7 82 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 1 76 1.3E-30 T 13-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 BEN78_00400 c3ce4cf3795b4724d6ac3cdf0ec397f7 82 PRINTS PR00160 Glutaredoxin signature 55 68 5.3E-5 T 13-10-2018 IPR014025 Glutaredoxin subgroup BEN78_00400 c3ce4cf3795b4724d6ac3cdf0ec397f7 82 PRINTS PR00160 Glutaredoxin signature 41 54 5.3E-5 T 13-10-2018 IPR014025 Glutaredoxin subgroup BEN78_00400 c3ce4cf3795b4724d6ac3cdf0ec397f7 82 SUPERFAMILY SSF52833 1 79 2.19E-22 T 13-10-2018 IPR036249 Thioredoxin-like superfamily BEN78_03490 aedaa7d36ec6032cd6d01b980e38bcec 286 SUPERFAMILY SSF51735 3 258 1.47E-28 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_03490 aedaa7d36ec6032cd6d01b980e38bcec 286 Pfam PF01370 NAD dependent epimerase/dehydratase family 123 191 7.5E-5 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 BEN78_03490 aedaa7d36ec6032cd6d01b980e38bcec 286 Gene3D G3DSA:3.40.50.720 5 80 1.6E-7 T 13-10-2018 BEN78_03490 aedaa7d36ec6032cd6d01b980e38bcec 286 Gene3D G3DSA:3.40.50.720 81 246 7.1E-17 T 13-10-2018 BEN78_12990 06bb2ba269b9fb74d301b93c34ab1026 596 Gene3D G3DSA:3.40.50.300 336 586 1.4E-86 T 13-10-2018 BEN78_12990 06bb2ba269b9fb74d301b93c34ab1026 596 Pfam PF00005 ABC transporter 364 514 9.0E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_12990 06bb2ba269b9fb74d301b93c34ab1026 596 SUPERFAMILY SSF52540 336 585 1.2E-86 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_12990 06bb2ba269b9fb74d301b93c34ab1026 596 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN78_12990 06bb2ba269b9fb74d301b93c34ab1026 596 Gene3D G3DSA:1.20.1560.10 3 335 7.6E-70 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BEN78_12990 06bb2ba269b9fb74d301b93c34ab1026 596 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 18 587 3.2E-232 T 13-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 BEN78_12990 06bb2ba269b9fb74d301b93c34ab1026 596 SUPERFAMILY SSF90123 19 335 8.76E-66 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BEN78_12990 06bb2ba269b9fb74d301b93c34ab1026 596 SMART SM00382 373 560 4.2E-18 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_12990 06bb2ba269b9fb74d301b93c34ab1026 596 Pfam PF00664 ABC transporter transmembrane region 36 298 2.2E-35 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BEN78_02305 4d4d9e4ee0cc18288730a03279ea616e 73 Pfam PF10636 Hemin uptake protein hemP 38 73 2.7E-18 T 13-10-2018 IPR019600 Hemin uptake protein HemP BEN78_02305 4d4d9e4ee0cc18288730a03279ea616e 73 Gene3D G3DSA:2.10.70.10 35 73 7.4E-16 T 13-10-2018 BEN78_09935 296c85879628f9e422c7803a56da8a1f 352 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 11 351 5.7E-136 T 13-10-2018 IPR005883 Type IV pilus assembly protein PilM BEN78_09935 296c85879628f9e422c7803a56da8a1f 352 Gene3D G3DSA:3.30.1490.300 87 146 1.4E-87 T 13-10-2018 BEN78_09935 296c85879628f9e422c7803a56da8a1f 352 Gene3D G3DSA:3.30.420.40 188 315 1.4E-87 T 13-10-2018 BEN78_09935 296c85879628f9e422c7803a56da8a1f 352 PIRSF PIRSF019169 1 352 3.3E-128 T 13-10-2018 IPR005883 Type IV pilus assembly protein PilM BEN78_09935 296c85879628f9e422c7803a56da8a1f 352 Gene3D G3DSA:3.30.420.40 12 349 1.4E-87 T 13-10-2018 BEN78_09935 296c85879628f9e422c7803a56da8a1f 352 SUPERFAMILY SSF53067 189 350 6.95E-24 T 13-10-2018 BEN78_09935 296c85879628f9e422c7803a56da8a1f 352 Pfam PF11104 Type IV pilus assembly protein PilM; 13 351 2.6E-134 T 13-10-2018 IPR005883 Type IV pilus assembly protein PilM BEN78_09935 296c85879628f9e422c7803a56da8a1f 352 SUPERFAMILY SSF53067 53 174 2.73E-9 T 13-10-2018 BEN78_16720 e00e383a6fa62571ea4eac4a6f436433 315 SUPERFAMILY SSF55347 135 289 1.18E-35 T 13-10-2018 BEN78_16720 e00e383a6fa62571ea4eac4a6f436433 315 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 130 146 - T 13-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BEN78_16720 e00e383a6fa62571ea4eac4a6f436433 315 SUPERFAMILY SSF51735 4 151 3.45E-41 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_16720 e00e383a6fa62571ea4eac4a6f436433 315 SMART SM00859 6 127 1.8E-31 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 BEN78_16720 e00e383a6fa62571ea4eac4a6f436433 315 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 5 315 32.766 T 13-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BEN78_16720 e00e383a6fa62571ea4eac4a6f436433 315 Gene3D G3DSA:3.30.360.10 133 289 2.5E-90 T 13-10-2018 BEN78_16720 e00e383a6fa62571ea4eac4a6f436433 315 Gene3D G3DSA:3.40.50.720 7 307 2.5E-90 T 13-10-2018 BEN78_16720 e00e383a6fa62571ea4eac4a6f436433 315 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 6 315 4.9E-97 T 13-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BEN78_16720 e00e383a6fa62571ea4eac4a6f436433 315 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 7 123 3.6E-27 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 BEN78_04220 bf1fce4f42f4fbac2ba55acc1dd6a516 410 SUPERFAMILY SSF53901 8 257 5.5E-60 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 BEN78_04220 bf1fce4f42f4fbac2ba55acc1dd6a516 410 SUPERFAMILY SSF53901 219 408 3.7E-60 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 BEN78_04220 bf1fce4f42f4fbac2ba55acc1dd6a516 410 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 158 174 - T 13-10-2018 IPR018201 Beta-ketoacyl synthase, active site BEN78_04220 bf1fce4f42f4fbac2ba55acc1dd6a516 410 SMART SM00825 Beta-ketoacyl synthase 10 410 4.5E-12 T 13-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BEN78_04220 bf1fce4f42f4fbac2ba55acc1dd6a516 410 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 259 365 4.4E-24 T 13-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal BEN78_04220 bf1fce4f42f4fbac2ba55acc1dd6a516 410 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 8 250 1.7E-42 T 13-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal BEN78_04220 bf1fce4f42f4fbac2ba55acc1dd6a516 410 Gene3D G3DSA:3.40.47.10 264 409 1.5E-43 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 BEN78_04220 bf1fce4f42f4fbac2ba55acc1dd6a516 410 Gene3D G3DSA:3.40.47.10 1 259 8.5E-62 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 BEN78_14900 b10927e7a95f23d5d0f626a3d3b9a5e2 332 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 173 204 - T 13-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 BEN78_14900 b10927e7a95f23d5d0f626a3d3b9a5e2 332 Gene3D G3DSA:3.30.390.10 1 103 1.3E-24 T 13-10-2018 IPR029017 Enolase-like, N-terminal BEN78_14900 b10927e7a95f23d5d0f626a3d3b9a5e2 332 SMART SM00922 129 223 7.3E-9 T 13-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal BEN78_14900 b10927e7a95f23d5d0f626a3d3b9a5e2 332 SUPERFAMILY SSF51604 118 323 1.57E-46 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily BEN78_14900 b10927e7a95f23d5d0f626a3d3b9a5e2 332 SUPERFAMILY SSF54826 2 111 1.94E-23 T 13-10-2018 BEN78_14900 b10927e7a95f23d5d0f626a3d3b9a5e2 332 Pfam PF13378 Enolase C-terminal domain-like 140 323 7.4E-23 T 13-10-2018 IPR029065 Enolase C-terminal domain-like BEN78_14900 b10927e7a95f23d5d0f626a3d3b9a5e2 332 Gene3D G3DSA:3.20.20.120 105 326 6.1E-49 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily BEN78_14900 b10927e7a95f23d5d0f626a3d3b9a5e2 332 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 8 111 5.1E-6 T 13-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain BEN78_11455 4c7168e4b8eebdf7c6385e0a44129f97 394 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 4 387 3.6E-112 T 13-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 BEN78_11455 4c7168e4b8eebdf7c6385e0a44129f97 394 Pfam PF01494 FAD binding domain 3 311 1.8E-21 T 13-10-2018 IPR002938 FAD-binding domain GO:0071949 BEN78_11455 4c7168e4b8eebdf7c6385e0a44129f97 394 SUPERFAMILY SSF51905 3 382 1.87E-48 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_11455 4c7168e4b8eebdf7c6385e0a44129f97 394 Gene3D G3DSA:3.50.50.60 4 335 2.5E-87 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_11455 4c7168e4b8eebdf7c6385e0a44129f97 394 Gene3D G3DSA:3.30.9.50 78 267 2.5E-87 T 13-10-2018 BEN78_11455 4c7168e4b8eebdf7c6385e0a44129f97 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 4.3E-14 T 13-10-2018 BEN78_11455 4c7168e4b8eebdf7c6385e0a44129f97 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 4.3E-14 T 13-10-2018 BEN78_11455 4c7168e4b8eebdf7c6385e0a44129f97 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 4.3E-14 T 13-10-2018 BEN78_11455 4c7168e4b8eebdf7c6385e0a44129f97 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 4.3E-14 T 13-10-2018 BEN78_16625 8b7ce8e31c7f70d1761a9567fcc1df64 304 SUPERFAMILY SSF53850 12 228 2.67E-58 T 13-10-2018 BEN78_16625 8b7ce8e31c7f70d1761a9567fcc1df64 304 Pfam PF01634 ATP phosphoribosyltransferase 60 209 5.0E-41 T 13-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 BEN78_16625 8b7ce8e31c7f70d1761a9567fcc1df64 304 Gene3D G3DSA:3.30.70.120 232 304 6.2E-18 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BEN78_16625 8b7ce8e31c7f70d1761a9567fcc1df64 304 Gene3D G3DSA:3.40.190.10 109 198 4.9E-62 T 13-10-2018 BEN78_16625 8b7ce8e31c7f70d1761a9567fcc1df64 304 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 162 183 - T 13-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 BEN78_16625 8b7ce8e31c7f70d1761a9567fcc1df64 304 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 12 304 30.401 T 13-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 BEN78_16625 8b7ce8e31c7f70d1761a9567fcc1df64 304 Gene3D G3DSA:3.40.190.10 13 227 4.9E-62 T 13-10-2018 BEN78_16625 8b7ce8e31c7f70d1761a9567fcc1df64 304 SUPERFAMILY SSF54913 233 303 2.0E-10 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta BEN78_16625 8b7ce8e31c7f70d1761a9567fcc1df64 304 Pfam PF08029 HisG, C-terminal domain 231 301 4.1E-14 T 13-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 BEN78_16625 8b7ce8e31c7f70d1761a9567fcc1df64 304 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 13 201 5.1E-49 T 13-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 BEN78_16625 8b7ce8e31c7f70d1761a9567fcc1df64 304 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 213 302 2.2E-18 T 13-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 BEN78_02630 eaecb5deb60cc1c3597a95ba58f68489 111 PIRSF PIRSF003113 1 96 3.5E-32 T 13-10-2018 IPR002634 BolA protein BEN78_02630 eaecb5deb60cc1c3597a95ba58f68489 111 Gene3D G3DSA:3.10.20.90 1 87 1.8E-27 T 13-10-2018 BEN78_02630 eaecb5deb60cc1c3597a95ba58f68489 111 Pfam PF01722 BolA-like protein 13 81 5.2E-26 T 13-10-2018 IPR002634 BolA protein BEN78_02630 eaecb5deb60cc1c3597a95ba58f68489 111 SUPERFAMILY SSF82657 2 84 4.45E-29 T 13-10-2018 IPR036065 BolA-like superfamily BEN78_00815 0914ae0cf07c639711344cd8b4592259 68 SUPERFAMILY SSF47598 5 54 1.95E-9 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 BEN78_00815 0914ae0cf07c639711344cd8b4592259 68 Gene3D G3DSA:1.10.1220.10 1 49 5.8E-8 T 13-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 BEN78_06090 5f115b22ab0a81feadd8495ec1af1532 393 Gene3D G3DSA:3.30.1490.330 263 341 1.2E-18 T 13-10-2018 BEN78_06090 5f115b22ab0a81feadd8495ec1af1532 393 SUPERFAMILY SSF56059 2 380 7.42E-78 T 13-10-2018 BEN78_06090 5f115b22ab0a81feadd8495ec1af1532 393 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 382 3.5E-143 T 13-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain BEN78_06090 5f115b22ab0a81feadd8495ec1af1532 393 SUPERFAMILY SSF52440 173 279 1.38E-34 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BEN78_05875 8e74b9479796029dda98a65f449aee53 204 Gene3D G3DSA:3.40.50.150 5 203 1.7E-19 T 13-10-2018 BEN78_05875 8e74b9479796029dda98a65f449aee53 204 SUPERFAMILY SSF53335 8 198 1.33E-24 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_05875 8e74b9479796029dda98a65f449aee53 204 Pfam PF06080 Protein of unknown function (DUF938) 6 204 1.6E-76 T 13-10-2018 IPR010342 Protein of unknown function DUF938 BEN78_07460 f98368fec6d42a8fc19f98c3089cc682 392 Gene3D G3DSA:1.10.540.10 2 127 3.9E-33 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 BEN78_07460 f98368fec6d42a8fc19f98c3089cc682 392 PIRSF PIRSF016578 12 391 2.7E-20 T 13-10-2018 BEN78_07460 f98368fec6d42a8fc19f98c3089cc682 392 Gene3D G3DSA:2.40.110.10 129 239 8.2E-45 T 13-10-2018 BEN78_07460 f98368fec6d42a8fc19f98c3089cc682 392 SUPERFAMILY SSF56645 9 248 8.64E-79 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 BEN78_07460 f98368fec6d42a8fc19f98c3089cc682 392 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 343 362 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 BEN78_07460 f98368fec6d42a8fc19f98c3089cc682 392 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 223 3.0E-25 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 BEN78_07460 f98368fec6d42a8fc19f98c3089cc682 392 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 131 143 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 BEN78_07460 f98368fec6d42a8fc19f98c3089cc682 392 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 235 385 4.0E-48 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 BEN78_07460 f98368fec6d42a8fc19f98c3089cc682 392 SUPERFAMILY SSF47203 234 387 2.58E-60 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 BEN78_07460 f98368fec6d42a8fc19f98c3089cc682 392 Gene3D G3DSA:1.20.140.10 240 391 1.5E-56 T 13-10-2018 BEN78_07460 f98368fec6d42a8fc19f98c3089cc682 392 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 125 4.2E-27 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 BEN78_05905 d2f8157de3caadd2a531e36e9e83ec16 645 SUPERFAMILY SSF52540 10 334 1.79E-33 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_05905 d2f8157de3caadd2a531e36e9e83ec16 645 Gene3D G3DSA:3.40.50.300 381 481 3.8E-9 T 13-10-2018 BEN78_05905 d2f8157de3caadd2a531e36e9e83ec16 645 Gene3D G3DSA:3.40.50.300 482 603 1.7E-24 T 13-10-2018 BEN78_05905 d2f8157de3caadd2a531e36e9e83ec16 645 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 11 612 47.747 T 13-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 BEN78_05905 d2f8157de3caadd2a531e36e9e83ec16 645 Gene3D G3DSA:3.40.50.300 114 358 3.2E-57 T 13-10-2018 BEN78_05905 d2f8157de3caadd2a531e36e9e83ec16 645 SUPERFAMILY SSF52540 296 613 2.83E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_05905 d2f8157de3caadd2a531e36e9e83ec16 645 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 3 614 2.4E-164 T 13-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 BEN78_05905 d2f8157de3caadd2a531e36e9e83ec16 645 Pfam PF13604 AAA domain 158 337 6.7E-30 T 13-10-2018 BEN78_05905 d2f8157de3caadd2a531e36e9e83ec16 645 Pfam PF13538 UvrD-like helicase C-terminal domain 543 589 1.8E-14 T 13-10-2018 IPR027785 UvrD-like helicase C-terminal domain BEN78_10885 43a3a72ec38df8cc692fab002523dd44 419 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 418 44.997 T 13-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BEN78_10885 43a3a72ec38df8cc692fab002523dd44 419 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 417 2.8E-174 T 13-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BEN78_10885 43a3a72ec38df8cc692fab002523dd44 419 Gene3D G3DSA:3.65.10.10 21 230 4.1E-165 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 BEN78_10885 43a3a72ec38df8cc692fab002523dd44 419 SUPERFAMILY SSF55205 1 418 1.8E-139 T 13-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 BEN78_10885 43a3a72ec38df8cc692fab002523dd44 419 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 408 6.7E-107 T 13-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 BEN78_10885 43a3a72ec38df8cc692fab002523dd44 419 Gene3D G3DSA:3.65.10.10 6 415 4.1E-165 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 BEN78_00140 609f1dede052b2778bffee44549f0284 377 Gene3D G3DSA:1.20.1250.20 1 361 1.8E-40 T 13-10-2018 BEN78_00140 609f1dede052b2778bffee44549f0284 377 Pfam PF07690 Major Facilitator Superfamily 2 328 1.1E-29 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN78_00140 609f1dede052b2778bffee44549f0284 377 SUPERFAMILY SSF103473 2 366 8.11E-45 T 13-10-2018 IPR036259 MFS transporter superfamily BEN78_01220 f368364fa018674e9d6a093267ba805e 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 264 278 3.6E-72 T 13-10-2018 BEN78_01220 f368364fa018674e9d6a093267ba805e 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 3.6E-72 T 13-10-2018 BEN78_01220 f368364fa018674e9d6a093267ba805e 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 411 426 3.6E-72 T 13-10-2018 BEN78_01220 f368364fa018674e9d6a093267ba805e 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 307 314 3.6E-72 T 13-10-2018 BEN78_01220 f368364fa018674e9d6a093267ba805e 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 152 3.6E-72 T 13-10-2018 BEN78_01220 f368364fa018674e9d6a093267ba805e 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 345 366 3.6E-72 T 13-10-2018 BEN78_01220 f368364fa018674e9d6a093267ba805e 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 3.6E-72 T 13-10-2018 BEN78_01220 f368364fa018674e9d6a093267ba805e 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 433 453 3.6E-72 T 13-10-2018 BEN78_01220 f368364fa018674e9d6a093267ba805e 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 43 58 3.6E-72 T 13-10-2018 BEN78_01220 f368364fa018674e9d6a093267ba805e 459 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 349 458 2.8E-30 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 BEN78_01220 f368364fa018674e9d6a093267ba805e 459 Gene3D G3DSA:3.50.50.60 10 331 4.2E-100 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_01220 f368364fa018674e9d6a093267ba805e 459 SUPERFAMILY SSF55424 347 459 7.22E-33 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BEN78_01220 f368364fa018674e9d6a093267ba805e 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 292 314 1.0E-32 T 13-10-2018 BEN78_01220 f368364fa018674e9d6a093267ba805e 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 1.0E-32 T 13-10-2018 BEN78_01220 f368364fa018674e9d6a093267ba805e 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 279 1.0E-32 T 13-10-2018 BEN78_01220 f368364fa018674e9d6a093267ba805e 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 1.0E-32 T 13-10-2018 BEN78_01220 f368364fa018674e9d6a093267ba805e 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 140 158 1.0E-32 T 13-10-2018 BEN78_01220 f368364fa018674e9d6a093267ba805e 459 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 44 54 - T 13-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 BEN78_01220 f368364fa018674e9d6a093267ba805e 459 SUPERFAMILY SSF51905 10 377 2.23E-54 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_01220 f368364fa018674e9d6a093267ba805e 459 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 10 328 1.8E-54 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BEN78_01220 f368364fa018674e9d6a093267ba805e 459 Gene3D G3DSA:3.50.50.60 152 270 4.2E-100 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_01220 f368364fa018674e9d6a093267ba805e 459 PIRSF PIRSF000350 2 458 1.7E-74 T 13-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 BEN78_01220 f368364fa018674e9d6a093267ba805e 459 Gene3D G3DSA:3.30.390.30 348 459 3.4E-42 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BEN78_13915 cf3be3e269b3edfec8f942d0d047148a 68 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 5.2E-31 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BEN78_13915 cf3be3e269b3edfec8f942d0d047148a 68 Gene3D G3DSA:2.40.50.140 3 65 2.5E-29 T 13-10-2018 BEN78_13915 cf3be3e269b3edfec8f942d0d047148a 68 SMART SM00357 3 67 1.6E-28 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 BEN78_13915 cf3be3e269b3edfec8f942d0d047148a 68 PIRSF PIRSF002599 1 68 1.1E-24 T 13-10-2018 IPR012156 Cold shock, CspA GO:0003676 BEN78_13915 cf3be3e269b3edfec8f942d0d047148a 68 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 13-10-2018 IPR019844 Cold-shock conserved site BEN78_13915 cf3be3e269b3edfec8f942d0d047148a 68 SUPERFAMILY SSF50249 1 66 1.61E-25 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN78_13915 cf3be3e269b3edfec8f942d0d047148a 68 PRINTS PR00050 Cold shock protein signature 4 19 9.2E-18 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BEN78_13915 cf3be3e269b3edfec8f942d0d047148a 68 PRINTS PR00050 Cold shock protein signature 25 34 9.2E-18 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BEN78_13915 cf3be3e269b3edfec8f942d0d047148a 68 PRINTS PR00050 Cold shock protein signature 40 58 9.2E-18 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BEN78_03495 58c8eb3e8c4f8026807deb224eb8ac68 925 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 305 317 3.7E-36 T 13-10-2018 BEN78_03495 58c8eb3e8c4f8026807deb224eb8ac68 925 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 74 99 3.7E-36 T 13-10-2018 BEN78_03495 58c8eb3e8c4f8026807deb224eb8ac68 925 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 102 122 3.7E-36 T 13-10-2018 BEN78_03495 58c8eb3e8c4f8026807deb224eb8ac68 925 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 414 433 3.7E-36 T 13-10-2018 BEN78_03495 58c8eb3e8c4f8026807deb224eb8ac68 925 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 149 170 3.7E-36 T 13-10-2018 BEN78_03495 58c8eb3e8c4f8026807deb224eb8ac68 925 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 215 236 3.7E-36 T 13-10-2018 BEN78_03495 58c8eb3e8c4f8026807deb224eb8ac68 925 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 237 263 3.7E-36 T 13-10-2018 BEN78_03495 58c8eb3e8c4f8026807deb224eb8ac68 925 Pfam PF00361 Proton-conducting membrane transporter 125 407 1.4E-62 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_03495 58c8eb3e8c4f8026807deb224eb8ac68 925 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 787 906 2.3E-26 T 13-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein BEN78_03495 58c8eb3e8c4f8026807deb224eb8ac68 925 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 60 112 2.0E-9 T 13-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_03495 58c8eb3e8c4f8026807deb224eb8ac68 925 Pfam PF13244 Domain of unknown function (DUF4040) 611 675 6.0E-19 T 13-10-2018 IPR025383 Domain of unknown function DUF4040 BEN78_15285 2d2290b9c027e4144a7884fe3e4ef00b 469 SUPERFAMILY SSF52540 1 176 1.71E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_15285 2d2290b9c027e4144a7884fe3e4ef00b 469 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 438 2.3E-162 T 13-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 BEN78_15285 2d2290b9c027e4144a7884fe3e4ef00b 469 SUPERFAMILY SSF52540 144 445 1.71E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_15285 2d2290b9c027e4144a7884fe3e4ef00b 469 PIRSF PIRSF006485 1 446 9.2E-164 T 13-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 BEN78_15285 2d2290b9c027e4144a7884fe3e4ef00b 469 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 162 1.9E-16 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BEN78_15285 2d2290b9c027e4144a7884fe3e4ef00b 469 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 182 347 9.8E-25 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BEN78_15285 2d2290b9c027e4144a7884fe3e4ef00b 469 Gene3D G3DSA:3.40.50.300 2 167 9.2E-42 T 13-10-2018 BEN78_15285 2d2290b9c027e4144a7884fe3e4ef00b 469 Pfam PF01926 50S ribosome-binding GTPase 5 124 1.1E-25 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 BEN78_15285 2d2290b9c027e4144a7884fe3e4ef00b 469 Pfam PF01926 50S ribosome-binding GTPase 184 302 5.0E-22 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 BEN78_15285 2d2290b9c027e4144a7884fe3e4ef00b 469 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 359 438 1.1E-22 T 13-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like BEN78_15285 2d2290b9c027e4144a7884fe3e4ef00b 469 Gene3D G3DSA:3.30.300.20 358 440 3.6E-19 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta BEN78_15285 2d2290b9c027e4144a7884fe3e4ef00b 469 Gene3D G3DSA:3.40.50.300 179 354 1.4E-45 T 13-10-2018 BEN78_15285 2d2290b9c027e4144a7884fe3e4ef00b 469 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 77 95 1.5E-8 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 BEN78_15285 2d2290b9c027e4144a7884fe3e4ef00b 469 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.5E-8 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 BEN78_15285 2d2290b9c027e4144a7884fe3e4ef00b 469 Hamap MF_00195 GTPase Der [der]. 2 441 36.362 T 13-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 BEN78_12485 e59c5ebda3b1580b48127941c97aeba2 251 PIRSF PIRSF000386 1 248 8.8E-91 T 13-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 BEN78_12485 e59c5ebda3b1580b48127941c97aeba2 251 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 222 3.7E-55 T 13-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 BEN78_12485 e59c5ebda3b1580b48127941c97aeba2 251 Gene3D G3DSA:1.10.1270.20 161 251 2.0E-29 T 13-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 BEN78_12485 e59c5ebda3b1580b48127941c97aeba2 251 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 251 105.973 T 13-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 BEN78_12485 e59c5ebda3b1580b48127941c97aeba2 251 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 2 228 2.0E-84 T 13-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 BEN78_12485 e59c5ebda3b1580b48127941c97aeba2 251 Gene3D G3DSA:3.40.1280.10 1 160 1.6E-60 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BEN78_12485 e59c5ebda3b1580b48127941c97aeba2 251 SUPERFAMILY SSF75217 2 247 1.24E-92 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases BEN78_11950 01fbf7c43b609b5f7f1b4a42e624fc51 689 SUPERFAMILY SSF56436 533 686 1.86E-11 T 13-10-2018 IPR016187 C-type lectin fold BEN78_11950 01fbf7c43b609b5f7f1b4a42e624fc51 689 Gene3D G3DSA:3.90.1580.10 530 622 5.2E-11 T 13-10-2018 BEN78_11950 01fbf7c43b609b5f7f1b4a42e624fc51 689 Gene3D G3DSA:3.30.200.20 12 99 1.9E-27 T 13-10-2018 BEN78_11950 01fbf7c43b609b5f7f1b4a42e624fc51 689 Pfam PF00069 Protein kinase domain 19 261 9.2E-40 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 BEN78_11950 01fbf7c43b609b5f7f1b4a42e624fc51 689 SUPERFAMILY SSF56112 18 268 4.72E-65 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily BEN78_11950 01fbf7c43b609b5f7f1b4a42e624fc51 689 Pfam PF03781 Sulfatase-modifying factor enzyme 1 545 624 9.5E-15 T 13-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 BEN78_11950 01fbf7c43b609b5f7f1b4a42e624fc51 689 SMART SM00220 19 273 2.4E-47 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 BEN78_11950 01fbf7c43b609b5f7f1b4a42e624fc51 689 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 136 148 - T 13-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 BEN78_11950 01fbf7c43b609b5f7f1b4a42e624fc51 689 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 25 48 - T 13-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 BEN78_11950 01fbf7c43b609b5f7f1b4a42e624fc51 689 Gene3D G3DSA:1.10.510.10 105 281 1.5E-41 T 13-10-2018 BEN78_11825 5a7b1108ab94186fb2210e369d6eceb6 435 Pfam PF03471 Transporter associated domain 347 426 1.7E-16 T 13-10-2018 IPR005170 Transporter-associated domain BEN78_11825 5a7b1108ab94186fb2210e369d6eceb6 435 Gene3D G3DSA:3.10.580.10 182 327 1.3E-42 T 13-10-2018 BEN78_11825 5a7b1108ab94186fb2210e369d6eceb6 435 SUPERFAMILY SSF54631 199 331 3.9E-25 T 13-10-2018 BEN78_11825 5a7b1108ab94186fb2210e369d6eceb6 435 Gene3D G3DSA:3.30.465.10 334 427 1.0E-25 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 BEN78_11825 5a7b1108ab94186fb2210e369d6eceb6 435 Gene3D G3DSA:3.90.1280.20 220 284 1.3E-42 T 13-10-2018 BEN78_11825 5a7b1108ab94186fb2210e369d6eceb6 435 Pfam PF01595 Domain of unknown function DUF21 6 197 8.6E-49 T 13-10-2018 IPR002550 CNNM, transmembrane domain BEN78_11825 5a7b1108ab94186fb2210e369d6eceb6 435 SMART SM00116 282 330 2.0 T 13-10-2018 IPR000644 CBS domain BEN78_11825 5a7b1108ab94186fb2210e369d6eceb6 435 SMART SM00116 221 270 11.0 T 13-10-2018 IPR000644 CBS domain BEN78_11825 5a7b1108ab94186fb2210e369d6eceb6 435 SMART SM01091 345 427 2.8E-22 T 13-10-2018 IPR005170 Transporter-associated domain BEN78_11825 5a7b1108ab94186fb2210e369d6eceb6 435 SUPERFAMILY SSF56176 343 433 2.64E-17 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BEN78_11825 5a7b1108ab94186fb2210e369d6eceb6 435 Pfam PF00571 CBS domain 218 269 0.0015 T 13-10-2018 IPR000644 CBS domain BEN78_11825 5a7b1108ab94186fb2210e369d6eceb6 435 Pfam PF00571 CBS domain 281 329 1.2E-6 T 13-10-2018 IPR000644 CBS domain BEN78_03705 e09d6caba8c2de369735a21ed2804b14 58 Pfam PF11154 Protein of unknown function (DUF2934) 5 41 3.9E-14 T 13-10-2018 IPR021327 Protein of unknown function DUF2934 BEN78_10985 ad518f85de220e88142b39661c7fe4f8 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 4.1E-34 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 BEN78_10985 ad518f85de220e88142b39661c7fe4f8 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 4.1E-34 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 BEN78_10985 ad518f85de220e88142b39661c7fe4f8 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 4.1E-34 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 BEN78_10985 ad518f85de220e88142b39661c7fe4f8 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 4.1E-34 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 BEN78_10985 ad518f85de220e88142b39661c7fe4f8 363 SUPERFAMILY SSF52540 3 301 9.35E-83 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_10985 ad518f85de220e88142b39661c7fe4f8 363 SUPERFAMILY SSF81271 279 360 4.58E-37 T 13-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 BEN78_10985 ad518f85de220e88142b39661c7fe4f8 363 Gene3D G3DSA:3.40.50.300 4 278 6.6E-150 T 13-10-2018 BEN78_10985 ad518f85de220e88142b39661c7fe4f8 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 7.3E-40 T 13-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 BEN78_10985 ad518f85de220e88142b39661c7fe4f8 363 Gene3D G3DSA:3.10.20.30 48 361 6.6E-150 T 13-10-2018 IPR012675 Beta-grasp domain superfamily BEN78_10985 ad518f85de220e88142b39661c7fe4f8 363 PIRSF PIRSF006641 1 363 2.6E-153 T 13-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 BEN78_10985 ad518f85de220e88142b39661c7fe4f8 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 3.3E-157 T 13-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 BEN78_10985 ad518f85de220e88142b39661c7fe4f8 363 Pfam PF01926 50S ribosome-binding GTPase 5 128 6.1E-22 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 BEN78_10985 ad518f85de220e88142b39661c7fe4f8 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 44.581 T 13-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 BEN78_10985 ad518f85de220e88142b39661c7fe4f8 363 Gene3D G3DSA:1.10.150.300 113 200 6.6E-150 T 13-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 BEN78_01460 a162665c0c257794e295c2d402f6d1c8 401 Pfam PF00331 Glycosyl hydrolase family 10 46 393 4.0E-94 T 13-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BEN78_01460 a162665c0c257794e295c2d402f6d1c8 401 PRINTS PR00134 Glycosyl hydrolase family 10 signature 242 254 2.4E-15 T 13-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BEN78_01460 a162665c0c257794e295c2d402f6d1c8 401 PRINTS PR00134 Glycosyl hydrolase family 10 signature 168 179 2.4E-15 T 13-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BEN78_01460 a162665c0c257794e295c2d402f6d1c8 401 PRINTS PR00134 Glycosyl hydrolase family 10 signature 120 132 2.4E-15 T 13-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BEN78_01460 a162665c0c257794e295c2d402f6d1c8 401 PRINTS PR00134 Glycosyl hydrolase family 10 signature 214 225 2.4E-15 T 13-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BEN78_01460 a162665c0c257794e295c2d402f6d1c8 401 Gene3D G3DSA:3.20.20.80 44 397 1.3E-119 T 13-10-2018 BEN78_01460 a162665c0c257794e295c2d402f6d1c8 401 ProSitePatterns PS00591 Glycosyl hydrolases family 10 (GH10) active site. 276 286 - T 13-10-2018 IPR031158 Glycosyl hydrolases family 10, active site MetaCyc: PWY-6717|MetaCyc: PWY-6784 BEN78_01460 a162665c0c257794e295c2d402f6d1c8 401 SUPERFAMILY SSF51445 46 394 6.26E-100 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily BEN78_01460 a162665c0c257794e295c2d402f6d1c8 401 SMART SM00633 89 396 3.1E-84 T 13-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BEN78_08700 46e85a307e20590d3efb04c8cf65fc37 1906 SUPERFAMILY SSF51126 393 622 9.73E-7 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor BEN78_08700 46e85a307e20590d3efb04c8cf65fc37 1906 SUPERFAMILY SSF103515 1609 1906 2.62E-37 T 13-10-2018 IPR036709 Autotransporter beta-domain superfamily BEN78_08700 46e85a307e20590d3efb04c8cf65fc37 1906 SUPERFAMILY SSF51126 13 182 1.32E-9 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor BEN78_08700 46e85a307e20590d3efb04c8cf65fc37 1906 Pfam PF12951 Passenger-associated-transport-repeat 1105 1133 2.6E-9 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08700 46e85a307e20590d3efb04c8cf65fc37 1906 Pfam PF12951 Passenger-associated-transport-repeat 588 615 7.2E-10 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08700 46e85a307e20590d3efb04c8cf65fc37 1906 Pfam PF12951 Passenger-associated-transport-repeat 658 683 1.1E-7 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08700 46e85a307e20590d3efb04c8cf65fc37 1906 Pfam PF12951 Passenger-associated-transport-repeat 1261 1290 4.9E-8 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08700 46e85a307e20590d3efb04c8cf65fc37 1906 Pfam PF12951 Passenger-associated-transport-repeat 1400 1426 3.1E-4 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08700 46e85a307e20590d3efb04c8cf65fc37 1906 Pfam PF12951 Passenger-associated-transport-repeat 800 828 1.2E-6 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08700 46e85a307e20590d3efb04c8cf65fc37 1906 Pfam PF12951 Passenger-associated-transport-repeat 1193 1222 3.4E-10 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08700 46e85a307e20590d3efb04c8cf65fc37 1906 Pfam PF12951 Passenger-associated-transport-repeat 1329 1358 3.6E-8 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08700 46e85a307e20590d3efb04c8cf65fc37 1906 Pfam PF12951 Passenger-associated-transport-repeat 211 240 5.9E-6 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08700 46e85a307e20590d3efb04c8cf65fc37 1906 Pfam PF12951 Passenger-associated-transport-repeat 144 172 1.3E-9 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08700 46e85a307e20590d3efb04c8cf65fc37 1906 Pfam PF12951 Passenger-associated-transport-repeat 279 308 7.3E-8 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08700 46e85a307e20590d3efb04c8cf65fc37 1906 Pfam PF12951 Passenger-associated-transport-repeat 724 751 1.1E-5 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08700 46e85a307e20590d3efb04c8cf65fc37 1906 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 1470 1906 2.4E-53 T 13-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 BEN78_08700 46e85a307e20590d3efb04c8cf65fc37 1906 SMART SM00869 1631 1890 1.2E-30 T 13-10-2018 IPR005546 Autotransporter beta-domain BEN78_08700 46e85a307e20590d3efb04c8cf65fc37 1906 SUPERFAMILY SSF51126 629 914 4.08E-23 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor BEN78_08700 46e85a307e20590d3efb04c8cf65fc37 1906 SUPERFAMILY SSF51126 899 1242 5.02E-11 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor BEN78_08700 46e85a307e20590d3efb04c8cf65fc37 1906 SUPERFAMILY SSF51126 180 394 4.39E-19 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor BEN78_08700 46e85a307e20590d3efb04c8cf65fc37 1906 Gene3D G3DSA:2.40.128.130 1598 1906 2.7E-57 T 13-10-2018 IPR036709 Autotransporter beta-domain superfamily BEN78_08700 46e85a307e20590d3efb04c8cf65fc37 1906 Gene3D G3DSA:2.160.20.20 1411 1587 8.8E-36 T 13-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily BEN78_08700 46e85a307e20590d3efb04c8cf65fc37 1906 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 586 616 5.6E-10 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08700 46e85a307e20590d3efb04c8cf65fc37 1906 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 657 684 3.5E-9 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08700 46e85a307e20590d3efb04c8cf65fc37 1906 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1261 1291 1.9E-9 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08700 46e85a307e20590d3efb04c8cf65fc37 1906 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 142 173 1.5E-10 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08700 46e85a307e20590d3efb04c8cf65fc37 1906 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 723 752 1.1E-8 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08700 46e85a307e20590d3efb04c8cf65fc37 1906 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1192 1223 6.4E-11 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08700 46e85a307e20590d3efb04c8cf65fc37 1906 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1329 1359 6.4E-10 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08700 46e85a307e20590d3efb04c8cf65fc37 1906 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1103 1133 5.4E-11 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08700 46e85a307e20590d3efb04c8cf65fc37 1906 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 210 241 2.2E-8 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08700 46e85a307e20590d3efb04c8cf65fc37 1906 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 799 829 3.9E-9 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08700 46e85a307e20590d3efb04c8cf65fc37 1906 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1400 1426 2.4E-6 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08700 46e85a307e20590d3efb04c8cf65fc37 1906 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 278 309 4.2E-10 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08700 46e85a307e20590d3efb04c8cf65fc37 1906 SUPERFAMILY SSF51126 1236 1586 1.73E-45 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor BEN78_00315 fdb608b9c24ba434646bbd7523a1b124 260 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 236 7.9E-69 T 13-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 BEN78_00315 fdb608b9c24ba434646bbd7523a1b124 260 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 253 39.995 T 13-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 BEN78_00315 fdb608b9c24ba434646bbd7523a1b124 260 Pfam PF01975 Survival protein SurE 3 185 8.3E-61 T 13-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 BEN78_00315 fdb608b9c24ba434646bbd7523a1b124 260 Gene3D G3DSA:3.40.1210.10 1 253 1.1E-90 T 13-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 BEN78_00315 fdb608b9c24ba434646bbd7523a1b124 260 SUPERFAMILY SSF64167 1 250 7.72E-83 T 13-10-2018 BEN78_04965 0b4af51a4718d9e43b65847bb4d6eefc 264 Gene3D G3DSA:3.10.560.10 15 149 5.4E-5 T 13-10-2018 BEN78_04965 0b4af51a4718d9e43b65847bb4d6eefc 264 Gene3D G3DSA:3.10.560.10 151 224 2.7E-20 T 13-10-2018 BEN78_04965 0b4af51a4718d9e43b65847bb4d6eefc 264 Pfam PF06251 Capsule biosynthesis GfcC 35 248 7.9E-25 T 13-10-2018 IPR010425 Domain of unknown function DUF1017 BEN78_04325 39a65c36b3eafbeed3295fc0671f73d5 330 PIRSF PIRSF002849 7 330 6.0E-129 T 13-10-2018 BEN78_04325 39a65c36b3eafbeed3295fc0671f73d5 330 Gene3D G3DSA:3.40.50.300 13 208 7.9E-51 T 13-10-2018 BEN78_04325 39a65c36b3eafbeed3295fc0671f73d5 330 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 51 181 8.4E-65 T 13-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 BEN78_04325 39a65c36b3eafbeed3295fc0671f73d5 330 SUPERFAMILY SSF52540 20 304 1.9E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_04325 39a65c36b3eafbeed3295fc0671f73d5 330 Gene3D G3DSA:1.10.8.300 217 325 3.4E-28 T 13-10-2018 BEN78_10820 a8332fbd6545ca112c168821cd8d2363 89 Gene3D G3DSA:3.30.1340.10 1 88 8.6E-27 T 13-10-2018 IPR035895 HPr-like superfamily BEN78_10820 a8332fbd6545ca112c168821cd8d2363 89 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 13-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site BEN78_10820 a8332fbd6545ca112c168821cd8d2363 89 SUPERFAMILY SSF55594 2 88 7.07E-26 T 13-10-2018 IPR035895 HPr-like superfamily BEN78_10820 a8332fbd6545ca112c168821cd8d2363 89 Pfam PF00381 PTS HPr component phosphorylation site 3 82 1.0E-24 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like BEN78_10820 a8332fbd6545ca112c168821cd8d2363 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.0E-15 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like BEN78_10820 a8332fbd6545ca112c168821cd8d2363 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.0E-15 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like BEN78_10820 a8332fbd6545ca112c168821cd8d2363 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.0E-15 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like BEN78_10820 a8332fbd6545ca112c168821cd8d2363 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 6.2E-30 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like BEN78_10820 a8332fbd6545ca112c168821cd8d2363 89 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 13-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site BEN78_08985 0ff2f2157efdcb3278420b022083ed8b 231 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN78_08985 0ff2f2157efdcb3278420b022083ed8b 231 Pfam PF00005 ABC transporter 25 173 1.1E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_08985 0ff2f2157efdcb3278420b022083ed8b 231 SUPERFAMILY SSF52540 5 226 3.06E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_08985 0ff2f2157efdcb3278420b022083ed8b 231 SMART SM00382 34 222 1.7E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_08985 0ff2f2157efdcb3278420b022083ed8b 231 Gene3D G3DSA:3.40.50.300 3 231 4.9E-71 T 13-10-2018 BEN78_16655 9355ab186c121bad314828abc7f5c894 461 SUPERFAMILY SSF55681 4 355 1.99E-73 T 13-10-2018 BEN78_16655 9355ab186c121bad314828abc7f5c894 461 PIRSF PIRSF001549 1 453 1.6E-135 T 13-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 BEN78_16655 9355ab186c121bad314828abc7f5c894 461 Gene3D G3DSA:3.30.930.10 1 357 5.7E-109 T 13-10-2018 BEN78_16655 9355ab186c121bad314828abc7f5c894 461 Pfam PF13393 Histidyl-tRNA synthetase 9 345 6.2E-37 T 13-10-2018 BEN78_16655 9355ab186c121bad314828abc7f5c894 461 SUPERFAMILY SSF52954 360 450 5.59E-22 T 13-10-2018 BEN78_16655 9355ab186c121bad314828abc7f5c894 461 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 2 453 28.489 T 13-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 BEN78_16655 9355ab186c121bad314828abc7f5c894 461 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 441 4.3E-123 T 13-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 BEN78_16655 9355ab186c121bad314828abc7f5c894 461 Pfam PF03129 Anticodon binding domain 373 450 1.1E-12 T 13-10-2018 IPR004154 Anticodon-binding BEN78_16655 9355ab186c121bad314828abc7f5c894 461 Gene3D G3DSA:3.40.50.800 358 447 4.2E-25 T 13-10-2018 IPR036621 Anticodon-binding domain superfamily BEN78_12850 97eeaace489745a631bc69ddb3d86863 870 Gene3D G3DSA:3.40.50.300 366 540 1.4E-70 T 13-10-2018 BEN78_12850 97eeaace489745a631bc69ddb3d86863 870 SUPERFAMILY SSF52540 366 537 6.58E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_12850 97eeaace489745a631bc69ddb3d86863 870 Gene3D G3DSA:2.40.30.10 541 658 4.5E-40 T 13-10-2018 BEN78_12850 97eeaace489745a631bc69ddb3d86863 870 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 294 342 2.5E-13 T 13-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal BEN78_12850 97eeaace489745a631bc69ddb3d86863 870 SUPERFAMILY SSF50447 772 868 4.37E-32 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BEN78_12850 97eeaace489745a631bc69ddb3d86863 870 Gene3D G3DSA:3.30.56.50 3 52 6.6E-10 T 13-10-2018 BEN78_12850 97eeaace489745a631bc69ddb3d86863 870 SUPERFAMILY SSF50447 542 624 2.65E-24 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BEN78_12850 97eeaace489745a631bc69ddb3d86863 870 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 287 870 1.4E-246 T 13-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 BEN78_12850 97eeaace489745a631bc69ddb3d86863 870 Gene3D G3DSA:2.40.30.10 771 869 7.2E-32 T 13-10-2018 BEN78_12850 97eeaace489745a631bc69ddb3d86863 870 SUPERFAMILY SSF46955 4 52 5.13E-9 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily BEN78_12850 97eeaace489745a631bc69ddb3d86863 870 ProSitePatterns PS01176 Initiation factor 2 signature. 821 843 - T 13-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 BEN78_12850 97eeaace489745a631bc69ddb3d86863 870 SUPERFAMILY SSF52156 654 777 4.05E-31 T 13-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily BEN78_12850 97eeaace489745a631bc69ddb3d86863 870 Pfam PF00009 Elongation factor Tu GTP binding domain 374 529 9.1E-34 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN78_12850 97eeaace489745a631bc69ddb3d86863 870 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 372 528 2.0E-31 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BEN78_12850 97eeaace489745a631bc69ddb3d86863 870 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 4 868 16.778 T 13-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 BEN78_12850 97eeaace489745a631bc69ddb3d86863 870 Pfam PF11987 Translation-initiation factor 2 655 760 1.7E-32 T 13-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 BEN78_12850 97eeaace489745a631bc69ddb3d86863 870 Gene3D G3DSA:3.40.50.10050 664 770 4.7E-32 T 13-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily BEN78_03730 c7e59c31a9abe5b905a26396d5fe5869 517 Hamap MF_00484 Glycogen synthase [glgA]. 47 512 37.767 T 13-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 BEN78_03730 c7e59c31a9abe5b905a26396d5fe5869 517 Gene3D G3DSA:3.40.50.2000 296 494 1.6E-142 T 13-10-2018 BEN78_03730 c7e59c31a9abe5b905a26396d5fe5869 517 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 50 511 3.5E-137 T 13-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 BEN78_03730 c7e59c31a9abe5b905a26396d5fe5869 517 Pfam PF00534 Glycosyl transferases group 1 329 469 4.1E-15 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 BEN78_03730 c7e59c31a9abe5b905a26396d5fe5869 517 Gene3D G3DSA:3.40.50.2000 50 509 1.6E-142 T 13-10-2018 BEN78_03730 c7e59c31a9abe5b905a26396d5fe5869 517 Pfam PF08323 Starch synthase catalytic domain 50 280 1.2E-60 T 13-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 BEN78_03730 c7e59c31a9abe5b905a26396d5fe5869 517 SUPERFAMILY SSF53756 46 514 3.42E-97 T 13-10-2018 BEN78_11860 cd2e521edc5dab11fde3eba8c84ecee3 614 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 20 292 9.6E-80 T 13-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 BEN78_11860 cd2e521edc5dab11fde3eba8c84ecee3 614 Gene3D G3DSA:1.20.1530.20 8 395 2.6E-84 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily BEN78_11860 cd2e521edc5dab11fde3eba8c84ecee3 614 Pfam PF00999 Sodium/hydrogen exchanger family 17 381 8.4E-70 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 BEN78_11860 cd2e521edc5dab11fde3eba8c84ecee3 614 SUPERFAMILY SSF51735 409 538 6.69E-32 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_11860 cd2e521edc5dab11fde3eba8c84ecee3 614 Pfam PF02254 TrkA-N domain 410 523 1.0E-21 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 BEN78_11860 cd2e521edc5dab11fde3eba8c84ecee3 614 Gene3D G3DSA:3.40.50.720 408 566 2.8E-33 T 13-10-2018 BEN78_09625 fa61e1c7add78af72a3ee9ea5112bc39 426 Pfam PF00482 Type II secretion system (T2SS), protein F 90 213 2.5E-29 T 13-10-2018 IPR018076 Type II secretion system F domain BEN78_09625 fa61e1c7add78af72a3ee9ea5112bc39 426 Pfam PF00482 Type II secretion system (T2SS), protein F 294 416 1.4E-29 T 13-10-2018 IPR018076 Type II secretion system F domain BEN78_09625 fa61e1c7add78af72a3ee9ea5112bc39 426 PRINTS PR00812 Bacterial general secretion pathway protein F signature 86 98 2.6E-16 T 13-10-2018 IPR003004 GspF/PilC family BEN78_09625 fa61e1c7add78af72a3ee9ea5112bc39 426 PRINTS PR00812 Bacterial general secretion pathway protein F signature 405 424 2.6E-16 T 13-10-2018 IPR003004 GspF/PilC family BEN78_09625 fa61e1c7add78af72a3ee9ea5112bc39 426 PRINTS PR00812 Bacterial general secretion pathway protein F signature 185 213 2.6E-16 T 13-10-2018 IPR003004 GspF/PilC family BEN78_09625 fa61e1c7add78af72a3ee9ea5112bc39 426 PRINTS PR00812 Bacterial general secretion pathway protein F signature 389 403 2.6E-16 T 13-10-2018 IPR003004 GspF/PilC family BEN78_09625 fa61e1c7add78af72a3ee9ea5112bc39 426 Gene3D G3DSA:1.20.81.30 78 192 1.7E-28 T 13-10-2018 BEN78_09625 fa61e1c7add78af72a3ee9ea5112bc39 426 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 185 213 - T 13-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 BEN78_09625 fa61e1c7add78af72a3ee9ea5112bc39 426 Gene3D G3DSA:1.20.81.30 277 388 6.1E-28 T 13-10-2018 BEN78_06250 69845d773de1af0b2d6edfe7de61c3d2 621 Gene3D G3DSA:3.40.50.200 157 515 6.1E-92 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BEN78_06250 69845d773de1af0b2d6edfe7de61c3d2 621 Gene3D G3DSA:2.60.120.380 524 620 5.6E-18 T 13-10-2018 BEN78_06250 69845d773de1af0b2d6edfe7de61c3d2 621 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 543 609 5.4E-10 T 13-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial BEN78_06250 69845d773de1af0b2d6edfe7de61c3d2 621 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 194 205 - T 13-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site BEN78_06250 69845d773de1af0b2d6edfe7de61c3d2 621 Pfam PF00082 Subtilase family 189 486 3.3E-47 T 13-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BEN78_06250 69845d773de1af0b2d6edfe7de61c3d2 621 PRINTS PR00723 Subtilisin serine protease family (S8) signature 189 208 3.3E-20 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN78_06250 69845d773de1af0b2d6edfe7de61c3d2 621 PRINTS PR00723 Subtilisin serine protease family (S8) signature 446 462 3.3E-20 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN78_06250 69845d773de1af0b2d6edfe7de61c3d2 621 PRINTS PR00723 Subtilisin serine protease family (S8) signature 260 273 3.3E-20 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN78_06250 69845d773de1af0b2d6edfe7de61c3d2 621 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 447 457 - T 13-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site BEN78_06250 69845d773de1af0b2d6edfe7de61c3d2 621 SUPERFAMILY SSF52743 176 510 1.11E-70 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BEN78_15250 3064a17f3eb18ab84688b323b7d15d42 112 Pfam PF06844 Protein of unknown function (DUF1244) 39 104 5.7E-34 T 13-10-2018 IPR023163 SMc04008-like domain BEN78_15250 3064a17f3eb18ab84688b323b7d15d42 112 SUPERFAMILY SSF158757 12 89 4.05E-30 T 13-10-2018 IPR036810 SMc04008-like superfamily BEN78_15250 3064a17f3eb18ab84688b323b7d15d42 112 Gene3D G3DSA:1.10.3340.10 8 112 3.2E-39 T 13-10-2018 IPR036810 SMc04008-like superfamily BEN78_08310 59eb1ade503ac24c06c9c1b067abec52 296 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 218 230 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site BEN78_08310 59eb1ade503ac24c06c9c1b067abec52 296 Pfam PF00348 Polyprenyl synthetase 44 272 7.6E-45 T 13-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 BEN78_08310 59eb1ade503ac24c06c9c1b067abec52 296 Gene3D G3DSA:1.10.600.10 13 293 2.2E-68 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily BEN78_08310 59eb1ade503ac24c06c9c1b067abec52 296 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 88 104 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site BEN78_08310 59eb1ade503ac24c06c9c1b067abec52 296 SUPERFAMILY SSF48576 18 282 1.12E-63 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily BEN78_03280 0e3a3eb8d92cfc09f39105c9ebc3c03c 451 SUPERFAMILY SSF55957 365 447 3.84E-19 T 13-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN78_03280 0e3a3eb8d92cfc09f39105c9ebc3c03c 451 SUPERFAMILY SSF53738 5 175 1.69E-32 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN78_03280 0e3a3eb8d92cfc09f39105c9ebc3c03c 451 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 130 4.0E-32 T 13-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN78_03280 0e3a3eb8d92cfc09f39105c9ebc3c03c 451 Gene3D G3DSA:3.40.120.10 248 365 2.3E-32 T 13-10-2018 BEN78_03280 0e3a3eb8d92cfc09f39105c9ebc3c03c 451 SUPERFAMILY SSF53738 256 360 6.28E-30 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN78_03280 0e3a3eb8d92cfc09f39105c9ebc3c03c 451 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 202 215 1.1E-26 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN78_03280 0e3a3eb8d92cfc09f39105c9ebc3c03c 451 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 90 104 1.1E-26 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN78_03280 0e3a3eb8d92cfc09f39105c9ebc3c03c 451 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 168 187 1.1E-26 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN78_03280 0e3a3eb8d92cfc09f39105c9ebc3c03c 451 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 231 246 1.1E-26 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN78_03280 0e3a3eb8d92cfc09f39105c9ebc3c03c 451 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 256 366 1.0E-22 T 13-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN78_03280 0e3a3eb8d92cfc09f39105c9ebc3c03c 451 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 152 251 1.5E-20 T 13-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN78_03280 0e3a3eb8d92cfc09f39105c9ebc3c03c 451 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 91 100 - T 13-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN78_03280 0e3a3eb8d92cfc09f39105c9ebc3c03c 451 Gene3D G3DSA:3.30.310.50 367 448 4.3E-27 T 13-10-2018 BEN78_03280 0e3a3eb8d92cfc09f39105c9ebc3c03c 451 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 371 443 3.5E-12 T 13-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN78_03280 0e3a3eb8d92cfc09f39105c9ebc3c03c 451 SUPERFAMILY SSF53738 151 253 9.81E-26 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN78_03280 0e3a3eb8d92cfc09f39105c9ebc3c03c 451 Gene3D G3DSA:3.40.120.10 170 247 2.3E-28 T 13-10-2018 BEN78_03280 0e3a3eb8d92cfc09f39105c9ebc3c03c 451 Gene3D G3DSA:3.40.120.10 1 144 4.5E-50 T 13-10-2018 BEN78_00130 fa67534f884e05bc790c2c5f2e39a9e8 734 SMART SM00028 347 380 0.5 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN78_00130 fa67534f884e05bc790c2c5f2e39a9e8 734 SMART SM00028 150 183 0.68 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN78_00130 fa67534f884e05bc790c2c5f2e39a9e8 734 SMART SM00028 269 302 1.4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN78_00130 fa67534f884e05bc790c2c5f2e39a9e8 734 SMART SM00028 307 340 20.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN78_00130 fa67534f884e05bc790c2c5f2e39a9e8 734 SUPERFAMILY SSF48452 269 422 4.17E-15 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_00130 fa67534f884e05bc790c2c5f2e39a9e8 734 Pfam PF13424 Tetratricopeptide repeat 308 377 3.8E-11 T 13-10-2018 BEN78_00130 fa67534f884e05bc790c2c5f2e39a9e8 734 Pfam PF13424 Tetratricopeptide repeat 240 300 3.5E-7 T 13-10-2018 BEN78_00130 fa67534f884e05bc790c2c5f2e39a9e8 734 Gene3D G3DSA:3.30.70.270 523 696 3.2E-45 T 13-10-2018 BEN78_00130 fa67534f884e05bc790c2c5f2e39a9e8 734 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 526 692 1.5E-36 T 13-10-2018 IPR000160 GGDEF domain BEN78_00130 fa67534f884e05bc790c2c5f2e39a9e8 734 SUPERFAMILY SSF48452 124 297 2.01E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_00130 fa67534f884e05bc790c2c5f2e39a9e8 734 Gene3D G3DSA:1.25.40.10 108 306 8.3E-18 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_00130 fa67534f884e05bc790c2c5f2e39a9e8 734 SUPERFAMILY SSF55073 534 694 2.04E-38 T 13-10-2018 IPR029787 Nucleotide cyclase BEN78_00130 fa67534f884e05bc790c2c5f2e39a9e8 734 Pfam PF00990 Diguanylate cyclase, GGDEF domain 531 690 7.6E-33 T 13-10-2018 IPR000160 GGDEF domain BEN78_00130 fa67534f884e05bc790c2c5f2e39a9e8 734 SMART SM00267 518 695 5.4E-46 T 13-10-2018 IPR000160 GGDEF domain BEN78_00130 fa67534f884e05bc790c2c5f2e39a9e8 734 Gene3D G3DSA:1.25.40.10 307 482 5.3E-17 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_03540 c3809a6995d153ed90ed0014f05330e6 160 Gene3D G3DSA:1.10.10.10 9 157 1.0E-38 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_03540 c3809a6995d153ed90ed0014f05330e6 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 84 3.2E-5 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN78_03540 c3809a6995d153ed90ed0014f05330e6 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 104 120 3.2E-5 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN78_03540 c3809a6995d153ed90ed0014f05330e6 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 134 154 3.2E-5 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN78_03540 c3809a6995d153ed90ed0014f05330e6 160 ProSitePatterns PS01117 MarR-type HTH domain signature. 83 117 - T 13-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site BEN78_03540 c3809a6995d153ed90ed0014f05330e6 160 Pfam PF12802 MarR family 50 108 8.9E-12 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN78_03540 c3809a6995d153ed90ed0014f05330e6 160 SMART SM00347 44 144 1.0E-14 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN78_03540 c3809a6995d153ed90ed0014f05330e6 160 SUPERFAMILY SSF46785 15 158 1.64E-30 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_10065 8a61c41f8b16b61c4f225babe7e398f3 313 Gene3D G3DSA:3.30.1490.20 139 197 5.9E-26 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BEN78_10065 8a61c41f8b16b61c4f225babe7e398f3 313 TIGRFAM TIGR01380 glut_syn: glutathione synthase 3 312 1.4E-130 T 13-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 BEN78_10065 8a61c41f8b16b61c4f225babe7e398f3 313 Hamap MF_00162 Glutathione synthetase [gshB]. 1 313 155.726 T 13-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 BEN78_10065 8a61c41f8b16b61c4f225babe7e398f3 313 SUPERFAMILY SSF52440 3 122 3.74E-38 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BEN78_10065 8a61c41f8b16b61c4f225babe7e398f3 313 Gene3D G3DSA:3.30.470.20 198 301 1.2E-35 T 13-10-2018 BEN78_10065 8a61c41f8b16b61c4f225babe7e398f3 313 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 3 121 1.6E-37 T 13-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 BEN78_10065 8a61c41f8b16b61c4f225babe7e398f3 313 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 125 297 3.2E-72 T 13-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 BEN78_10065 8a61c41f8b16b61c4f225babe7e398f3 313 Gene3D G3DSA:3.40.50.20 2 129 2.5E-39 T 13-10-2018 BEN78_10065 8a61c41f8b16b61c4f225babe7e398f3 313 SUPERFAMILY SSF56059 124 312 2.43E-56 T 13-10-2018 BEN78_00720 560345d4ab28ea547c61fa7bab2e1dc1 57 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 2 44 4.4E-7 T 13-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 BEN78_00720 560345d4ab28ea547c61fa7bab2e1dc1 57 Pfam PF04995 Heme exporter protein D (CcmD) 2 44 4.3E-10 T 13-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 BEN78_08735 b1ea68cf74c0e9a2642f682025fc5ebf 244 SMART SM00986 65 225 5.6E-40 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BEN78_08735 b1ea68cf74c0e9a2642f682025fc5ebf 244 SUPERFAMILY SSF52141 18 237 3.27E-88 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BEN78_08735 b1ea68cf74c0e9a2642f682025fc5ebf 244 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 73 82 - T 13-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BEN78_08735 b1ea68cf74c0e9a2642f682025fc5ebf 244 Pfam PF03167 Uracil DNA glycosylase superfamily 70 224 3.1E-21 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BEN78_08735 b1ea68cf74c0e9a2642f682025fc5ebf 244 Gene3D G3DSA:3.40.470.10 3 243 7.5E-94 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BEN78_08735 b1ea68cf74c0e9a2642f682025fc5ebf 244 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 21 229 6.2E-77 T 13-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BEN78_08735 b1ea68cf74c0e9a2642f682025fc5ebf 244 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 20 236 39.231 T 13-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BEN78_08735 b1ea68cf74c0e9a2642f682025fc5ebf 244 SMART SM00987 65 225 5.6E-40 T 13-10-2018 BEN78_00065 60bb7b5e4aa43114bde217137b0cb7f7 158 Pfam PF02525 Flavodoxin-like fold 1 134 7.2E-32 T 13-10-2018 IPR003680 Flavodoxin-like fold BEN78_00065 60bb7b5e4aa43114bde217137b0cb7f7 158 Gene3D G3DSA:3.40.50.360 1 155 6.2E-37 T 13-10-2018 IPR029039 Flavoprotein-like superfamily BEN78_00065 60bb7b5e4aa43114bde217137b0cb7f7 158 SUPERFAMILY SSF52218 1 155 3.49E-39 T 13-10-2018 IPR029039 Flavoprotein-like superfamily BEN78_04050 8e603cc565d3bc0e970563bdbe37d3bb 456 SUPERFAMILY SSF51161 254 437 9.63E-47 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily BEN78_04050 8e603cc565d3bc0e970563bdbe37d3bb 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 266 298 8.1E-4 T 13-10-2018 IPR001451 Hexapeptide repeat BEN78_04050 8e603cc565d3bc0e970563bdbe37d3bb 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 394 427 5.6E-7 T 13-10-2018 IPR001451 Hexapeptide repeat BEN78_04050 8e603cc565d3bc0e970563bdbe37d3bb 456 SUPERFAMILY SSF53448 5 246 1.08E-58 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_04050 8e603cc565d3bc0e970563bdbe37d3bb 456 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 6 453 1.6E-183 T 13-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 BEN78_04050 8e603cc565d3bc0e970563bdbe37d3bb 456 Pfam PF12804 MobA-like NTP transferase domain 7 120 3.6E-22 T 13-10-2018 IPR025877 MobA-like NTP transferase BEN78_04050 8e603cc565d3bc0e970563bdbe37d3bb 456 Gene3D G3DSA:2.160.10.10 228 454 5.7E-62 T 13-10-2018 BEN78_04050 8e603cc565d3bc0e970563bdbe37d3bb 456 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 4 451 40.776 T 13-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 BEN78_04050 8e603cc565d3bc0e970563bdbe37d3bb 456 Gene3D G3DSA:3.90.550.10 2 226 7.8E-60 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_14640 78dabec689ba21449ffdbb5efa8ebee1 135 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 88 131 3.0E-11 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BEN78_14640 78dabec689ba21449ffdbb5efa8ebee1 135 Pfam PF00460 Flagella basal body rod protein 7 36 1.1E-8 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BEN78_14640 78dabec689ba21449ffdbb5efa8ebee1 135 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 6 135 1.6E-44 T 13-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 BEN78_14640 78dabec689ba21449ffdbb5efa8ebee1 135 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site BEN78_06800 85000988a300bb70ecae291cbc803f72 154 Gene3D G3DSA:3.40.1280.10 1 154 4.3E-60 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BEN78_06800 85000988a300bb70ecae291cbc803f72 154 SUPERFAMILY SSF75217 2 152 2.03E-41 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases BEN78_06800 85000988a300bb70ecae291cbc803f72 154 PIRSF PIRSF029256 1 154 5.6E-61 T 13-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 BEN78_06800 85000988a300bb70ecae291cbc803f72 154 Pfam PF00588 SpoU rRNA Methylase family 3 141 8.1E-31 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 BEN78_06800 85000988a300bb70ecae291cbc803f72 154 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 32.072 T 13-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 BEN78_05390 5fae3971e5f0a4a5bd8c279cad76e95e 461 SUPERFAMILY SSF53623 87 314 3.89E-52 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BEN78_05390 5fae3971e5f0a4a5bd8c279cad76e95e 461 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 455 52.022 T 13-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 BEN78_05390 5fae3971e5f0a4a5bd8c279cad76e95e 461 Gene3D G3DSA:3.40.1190.10 79 315 4.8E-61 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BEN78_05390 5fae3971e5f0a4a5bd8c279cad76e95e 461 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 1 455 1.2E-176 T 13-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 BEN78_05390 5fae3971e5f0a4a5bd8c279cad76e95e 461 Pfam PF08245 Mur ligase middle domain 96 297 1.0E-22 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 BEN78_05390 5fae3971e5f0a4a5bd8c279cad76e95e 461 SUPERFAMILY SSF53244 317 451 6.28E-34 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BEN78_05390 5fae3971e5f0a4a5bd8c279cad76e95e 461 SUPERFAMILY SSF51984 1 77 3.92E-13 T 13-10-2018 BEN78_05390 5fae3971e5f0a4a5bd8c279cad76e95e 461 Gene3D G3DSA:3.40.50.720 1 78 2.0E-23 T 13-10-2018 BEN78_05390 5fae3971e5f0a4a5bd8c279cad76e95e 461 Pfam PF02875 Mur ligase family, glutamate ligase domain 317 383 9.4E-11 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 BEN78_05390 5fae3971e5f0a4a5bd8c279cad76e95e 461 Gene3D G3DSA:3.90.190.20 316 457 4.2E-27 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BEN78_05390 5fae3971e5f0a4a5bd8c279cad76e95e 461 Pfam PF01225 Mur ligase family, catalytic domain 1 85 6.4E-10 T 13-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 BEN78_08505 c49cad748d94af2debe29a1ed3e6da45 591 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 189 323 3.2E-40 T 13-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 BEN78_08505 c49cad748d94af2debe29a1ed3e6da45 591 SUPERFAMILY SSF52467 186 352 3.79E-52 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily BEN78_08505 c49cad748d94af2debe29a1ed3e6da45 591 Gene3D G3DSA:3.40.50.1220 189 355 3.5E-125 T 13-10-2018 BEN78_08505 c49cad748d94af2debe29a1ed3e6da45 591 SUPERFAMILY SSF52518 369 560 1.48E-66 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold BEN78_08505 c49cad748d94af2debe29a1ed3e6da45 591 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 422 441 - T 13-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 BEN78_08505 c49cad748d94af2debe29a1ed3e6da45 591 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 556 1.6E-210 T 13-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 BEN78_08505 c49cad748d94af2debe29a1ed3e6da45 591 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 162 5.5E-57 T 13-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 BEN78_08505 c49cad748d94af2debe29a1ed3e6da45 591 SUPERFAMILY SSF52518 1 166 8.84E-61 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold BEN78_08505 c49cad748d94af2debe29a1ed3e6da45 591 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 385 533 1.3E-51 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 BEN78_08505 c49cad748d94af2debe29a1ed3e6da45 591 Gene3D G3DSA:3.40.50.970 1 176 7.3E-70 T 13-10-2018 BEN78_08505 c49cad748d94af2debe29a1ed3e6da45 591 Gene3D G3DSA:3.40.50.970 356 533 3.5E-125 T 13-10-2018 BEN78_15220 3d1dc44363dfae6cfaadbc123c580acd 929 Pfam PF00271 Helicase conserved C-terminal domain 464 573 1.3E-16 T 13-10-2018 IPR001650 Helicase, C-terminal BEN78_15220 3d1dc44363dfae6cfaadbc123c580acd 929 SUPERFAMILY SSF52540 151 589 2.63E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_15220 3d1dc44363dfae6cfaadbc123c580acd 929 Gene3D G3DSA:3.40.50.10810 101 369 1.6E-59 T 13-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily BEN78_15220 3d1dc44363dfae6cfaadbc123c580acd 929 SMART SM00490 489 573 7.2E-19 T 13-10-2018 IPR001650 Helicase, C-terminal BEN78_15220 3d1dc44363dfae6cfaadbc123c580acd 929 Gene3D G3DSA:3.40.50.300 428 602 1.2E-29 T 13-10-2018 BEN78_15220 3d1dc44363dfae6cfaadbc123c580acd 929 Pfam PF00176 SNF2 family N-terminal domain 123 287 9.2E-15 T 13-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 BEN78_15220 3d1dc44363dfae6cfaadbc123c580acd 929 SMART SM00487 99 303 1.6E-19 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN78_03305 8b04b5c0e98c9b9e098aed67f293cac0 351 Gene3D G3DSA:3.90.25.10 200 331 2.3E-130 T 13-10-2018 BEN78_03305 8b04b5c0e98c9b9e098aed67f293cac0 351 SUPERFAMILY SSF51735 3 342 3.66E-95 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_03305 8b04b5c0e98c9b9e098aed67f293cac0 351 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 4 336 2.5E-155 T 13-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 BEN78_03305 8b04b5c0e98c9b9e098aed67f293cac0 351 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 323 2.3E-99 T 13-10-2018 IPR016040 NAD(P)-binding domain BEN78_03305 8b04b5c0e98c9b9e098aed67f293cac0 351 Gene3D G3DSA:3.40.50.720 4 322 2.3E-130 T 13-10-2018 BEN78_12885 6371521eb29640aab3ccdac1c2199a91 418 Gene3D G3DSA:1.10.287.470 193 256 9.5E-10 T 13-10-2018 BEN78_12885 6371521eb29640aab3ccdac1c2199a91 418 Gene3D G3DSA:2.40.50.100 61 101 1.8E-5 T 13-10-2018 BEN78_12885 6371521eb29640aab3ccdac1c2199a91 418 Pfam PF13437 HlyD family secretion protein 266 349 2.7E-13 T 13-10-2018 BEN78_12885 6371521eb29640aab3ccdac1c2199a91 418 SUPERFAMILY SSF51230 65 124 1.19E-6 T 13-10-2018 IPR011053 Single hybrid motif BEN78_12885 6371521eb29640aab3ccdac1c2199a91 418 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 80 100 2.7E-14 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BEN78_12885 6371521eb29640aab3ccdac1c2199a91 418 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 277 298 2.7E-14 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BEN78_12885 6371521eb29640aab3ccdac1c2199a91 418 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 310 334 2.7E-14 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BEN78_12885 6371521eb29640aab3ccdac1c2199a91 418 Gene3D G3DSA:2.40.50.100 257 297 9.5E-10 T 13-10-2018 BEN78_12885 6371521eb29640aab3ccdac1c2199a91 418 Gene3D G3DSA:2.40.30.170 298 351 9.5E-10 T 13-10-2018 BEN78_07115 00452afbec76879d3c6192b78999c55b 909 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 567 579 - T 13-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BEN78_07115 00452afbec76879d3c6192b78999c55b 909 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 154 165 - T 13-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BEN78_07115 00452afbec76879d3c6192b78999c55b 909 SUPERFAMILY SSF51621 26 909 2.2E-256 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BEN78_07115 00452afbec76879d3c6192b78999c55b 909 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 264 279 3.1E-51 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BEN78_07115 00452afbec76879d3c6192b78999c55b 909 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 740 766 3.1E-51 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BEN78_07115 00452afbec76879d3c6192b78999c55b 909 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 153 166 3.1E-51 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BEN78_07115 00452afbec76879d3c6192b78999c55b 909 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 206 222 3.1E-51 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BEN78_07115 00452afbec76879d3c6192b78999c55b 909 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 411 431 3.1E-51 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BEN78_07115 00452afbec76879d3c6192b78999c55b 909 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 565 585 3.1E-51 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BEN78_07115 00452afbec76879d3c6192b78999c55b 909 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 607 636 3.1E-51 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BEN78_07115 00452afbec76879d3c6192b78999c55b 909 Pfam PF00311 Phosphoenolpyruvate carboxylase 149 909 1.3E-228 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BEN78_07115 00452afbec76879d3c6192b78999c55b 909 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 18 909 16.68 T 13-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BEN78_12420 05e43f09a1c332e492ac3b7bdb64161f 462 Pfam PF13541 Subunit ChlI of Mg-chelatase 355 437 5.5E-9 T 13-10-2018 BEN78_12420 05e43f09a1c332e492ac3b7bdb64161f 462 SUPERFAMILY SSF52540 76 296 6.86E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_12420 05e43f09a1c332e492ac3b7bdb64161f 462 Gene3D G3DSA:3.30.230.10 336 462 5.7E-17 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BEN78_12420 05e43f09a1c332e492ac3b7bdb64161f 462 PRINTS PR01874 DNA repair protein radA signature 131 148 2.8E-91 T 13-10-2018 BEN78_12420 05e43f09a1c332e492ac3b7bdb64161f 462 PRINTS PR01874 DNA repair protein radA signature 14 38 2.8E-91 T 13-10-2018 BEN78_12420 05e43f09a1c332e492ac3b7bdb64161f 462 PRINTS PR01874 DNA repair protein radA signature 181 205 2.8E-91 T 13-10-2018 BEN78_12420 05e43f09a1c332e492ac3b7bdb64161f 462 PRINTS PR01874 DNA repair protein radA signature 90 118 2.8E-91 T 13-10-2018 BEN78_12420 05e43f09a1c332e492ac3b7bdb64161f 462 PRINTS PR01874 DNA repair protein radA signature 255 281 2.8E-91 T 13-10-2018 BEN78_12420 05e43f09a1c332e492ac3b7bdb64161f 462 PRINTS PR01874 DNA repair protein radA signature 220 248 2.8E-91 T 13-10-2018 BEN78_12420 05e43f09a1c332e492ac3b7bdb64161f 462 PRINTS PR01874 DNA repair protein radA signature 329 352 2.8E-91 T 13-10-2018 BEN78_12420 05e43f09a1c332e492ac3b7bdb64161f 462 Gene3D G3DSA:3.40.50.300 70 292 4.1E-40 T 13-10-2018 BEN78_12420 05e43f09a1c332e492ac3b7bdb64161f 462 SUPERFAMILY SSF54211 262 462 3.57E-41 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BEN78_12420 05e43f09a1c332e492ac3b7bdb64161f 462 TIGRFAM TIGR00416 sms: DNA repair protein RadA 6 459 4.0E-189 T 13-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 BEN78_12420 05e43f09a1c332e492ac3b7bdb64161f 462 Pfam PF06745 KaiC 81 266 1.9E-14 T 13-10-2018 IPR014774 KaiC-like domain BEN78_12420 05e43f09a1c332e492ac3b7bdb64161f 462 Hamap MF_01498 DNA repair protein RadA [radA]. 25 460 42.682 T 13-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 BEN78_12420 05e43f09a1c332e492ac3b7bdb64161f 462 SMART SM00382 98 251 2.7E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_13670 b03a149d9b1ab46727fd64ec12581c1a 902 Pfam PF00809 Pterin binding enzyme 34 272 4.0E-59 T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BEN78_13670 b03a149d9b1ab46727fd64ec12581c1a 902 Gene3D G3DSA:3.10.196.10 584 897 4.9E-134 T 13-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BEN78_13670 b03a149d9b1ab46727fd64ec12581c1a 902 SMART SM01018 329 412 5.7E-43 T 13-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BEN78_13670 b03a149d9b1ab46727fd64ec12581c1a 902 Gene3D G3DSA:1.10.1240.10 321 409 3.6E-38 T 13-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BEN78_13670 b03a149d9b1ab46727fd64ec12581c1a 902 TIGRFAM TIGR02082 metH: methionine synthase 7 867 0.0 T 13-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BEN78_13670 b03a149d9b1ab46727fd64ec12581c1a 902 Pfam PF02607 B12 binding domain 331 404 1.6E-25 T 13-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BEN78_13670 b03a149d9b1ab46727fd64ec12581c1a 902 Gene3D G3DSA:3.40.50.280 419 571 2.3E-54 T 13-10-2018 BEN78_13670 b03a149d9b1ab46727fd64ec12581c1a 902 PIRSF PIRSF000381 2 870 0.0 T 13-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BEN78_13670 b03a149d9b1ab46727fd64ec12581c1a 902 SUPERFAMILY SSF52242 419 570 3.79E-43 T 13-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 BEN78_13670 b03a149d9b1ab46727fd64ec12581c1a 902 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 615 883 1.9E-122 T 13-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BEN78_13670 b03a149d9b1ab46727fd64ec12581c1a 902 SUPERFAMILY SSF47644 325 411 1.57E-27 T 13-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BEN78_13670 b03a149d9b1ab46727fd64ec12581c1a 902 Pfam PF02310 B12 binding domain 424 515 2.8E-19 T 13-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 BEN78_13670 b03a149d9b1ab46727fd64ec12581c1a 902 SUPERFAMILY SSF51717 30 304 1.57E-85 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BEN78_13670 b03a149d9b1ab46727fd64ec12581c1a 902 Gene3D G3DSA:3.20.20.20 14 316 8.9E-128 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BEN78_13670 b03a149d9b1ab46727fd64ec12581c1a 902 Gene3D G3DSA:1.10.288.10 613 767 4.9E-134 T 13-10-2018 BEN78_13670 b03a149d9b1ab46727fd64ec12581c1a 902 SUPERFAMILY SSF56507 578 902 8.24E-129 T 13-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BEN78_12870 171661dd2ab774e92f69374f8766afd7 702 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 2.0E-21 T 13-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BEN78_12870 171661dd2ab774e92f69374f8766afd7 702 Pfam PF01138 3' exoribonuclease family, domain 1 14 143 4.5E-17 T 13-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BEN78_12870 171661dd2ab774e92f69374f8766afd7 702 PIRSF PIRSF005499 1 702 3.0E-295 T 13-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 BEN78_12870 171661dd2ab774e92f69374f8766afd7 702 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 9 693 0.0 T 13-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 BEN78_12870 171661dd2ab774e92f69374f8766afd7 702 SUPERFAMILY SSF46915 225 327 3.53E-20 T 13-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 BEN78_12870 171661dd2ab774e92f69374f8766afd7 702 SUPERFAMILY SSF55666 144 234 1.29E-28 T 13-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BEN78_12870 171661dd2ab774e92f69374f8766afd7 702 Gene3D G3DSA:3.30.230.70 1 234 7.0E-78 T 13-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BEN78_12870 171661dd2ab774e92f69374f8766afd7 702 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 245 320 1.1E-11 T 13-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 BEN78_12870 171661dd2ab774e92f69374f8766afd7 702 Gene3D G3DSA:2.40.50.140 623 695 1.5E-30 T 13-10-2018 BEN78_12870 171661dd2ab774e92f69374f8766afd7 702 SUPERFAMILY SSF50249 610 694 4.63E-23 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN78_12870 171661dd2ab774e92f69374f8766afd7 702 Gene3D G3DSA:3.30.230.70 235 550 1.6E-115 T 13-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BEN78_12870 171661dd2ab774e92f69374f8766afd7 702 SUPERFAMILY SSF54211 305 493 4.61E-47 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BEN78_12870 171661dd2ab774e92f69374f8766afd7 702 SUPERFAMILY SSF54211 4 143 4.05E-49 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BEN78_12870 171661dd2ab774e92f69374f8766afd7 702 Gene3D G3DSA:3.30.1370.10 551 622 2.6E-19 T 13-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 BEN78_12870 171661dd2ab774e92f69374f8766afd7 702 SMART SM00316 621 691 9.9E-27 T 13-10-2018 IPR022967 RNA-binding domain, S1 BEN78_12870 171661dd2ab774e92f69374f8766afd7 702 Pfam PF03725 3' exoribonuclease family, domain 2 460 530 5.3E-6 T 13-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BEN78_12870 171661dd2ab774e92f69374f8766afd7 702 Pfam PF03725 3' exoribonuclease family, domain 2 146 209 2.2E-10 T 13-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BEN78_12870 171661dd2ab774e92f69374f8766afd7 702 Pfam PF00575 S1 RNA binding domain 620 691 1.6E-20 T 13-10-2018 IPR003029 S1 domain GO:0003676 BEN78_12870 171661dd2ab774e92f69374f8766afd7 702 Pfam PF00013 KH domain 558 614 4.5E-9 T 13-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 BEN78_12870 171661dd2ab774e92f69374f8766afd7 702 SUPERFAMILY SSF54791 553 630 1.21E-16 T 13-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 BEN78_12870 171661dd2ab774e92f69374f8766afd7 702 SUPERFAMILY SSF55666 451 550 1.07E-28 T 13-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BEN78_12870 171661dd2ab774e92f69374f8766afd7 702 SMART SM00322 553 618 8.5E-12 T 13-10-2018 IPR004087 K Homology domain GO:0003676 BEN78_12870 171661dd2ab774e92f69374f8766afd7 702 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 694 30.443 T 13-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 BEN78_07525 ad8853778698d87fe1e3995fd3adcbd8 210 SUPERFAMILY SSF52540 1 208 1.68E-34 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_07525 ad8853778698d87fe1e3995fd3adcbd8 210 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 177 3.6E-16 T 13-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain BEN78_07525 ad8853778698d87fe1e3995fd3adcbd8 210 PIRSF PIRSF009320 1 204 1.3E-29 T 13-10-2018 BEN78_07525 ad8853778698d87fe1e3995fd3adcbd8 210 Gene3D G3DSA:3.40.50.300 4 210 3.7E-38 T 13-10-2018 BEN78_11760 dfc83511143484c0ae1723249e1b165f 210 Gene3D G3DSA:3.90.80.10 40 209 2.8E-52 T 13-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 BEN78_11760 dfc83511143484c0ae1723249e1b165f 210 Pfam PF00719 Inorganic pyrophosphatase 54 207 1.1E-44 T 13-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 BEN78_11760 dfc83511143484c0ae1723249e1b165f 210 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 49 209 30.105 T 13-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 BEN78_11760 dfc83511143484c0ae1723249e1b165f 210 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 100 106 - T 13-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 BEN78_11760 dfc83511143484c0ae1723249e1b165f 210 SUPERFAMILY SSF50324 44 207 9.03E-50 T 13-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 BEN78_00325 b623b577039ef2ac3473ebe50a55279a 819 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 715 734 1.4E-54 T 13-10-2018 BEN78_00325 b623b577039ef2ac3473ebe50a55279a 819 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 358 377 1.4E-54 T 13-10-2018 BEN78_00325 b623b577039ef2ac3473ebe50a55279a 819 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 685 704 1.4E-54 T 13-10-2018 BEN78_00325 b623b577039ef2ac3473ebe50a55279a 819 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 738 756 1.4E-54 T 13-10-2018 BEN78_00325 b623b577039ef2ac3473ebe50a55279a 819 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 607 623 1.4E-54 T 13-10-2018 BEN78_00325 b623b577039ef2ac3473ebe50a55279a 819 SUPERFAMILY SSF54211 607 782 6.45E-58 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BEN78_00325 b623b577039ef2ac3473ebe50a55279a 819 SMART SM00382 350 496 9.5E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_00325 b623b577039ef2ac3473ebe50a55279a 819 SMART SM00464 11 204 3.7E-71 T 13-10-2018 IPR003111 Lon, substrate-binding domain BEN78_00325 b623b577039ef2ac3473ebe50a55279a 819 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 12 199 5.6E-37 T 13-10-2018 IPR003111 Lon, substrate-binding domain BEN78_00325 b623b577039ef2ac3473ebe50a55279a 819 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 581 784 8.1E-96 T 13-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 BEN78_00325 b623b577039ef2ac3473ebe50a55279a 819 Gene3D G3DSA:3.40.50.300 315 492 1.6E-61 T 13-10-2018 BEN78_00325 b623b577039ef2ac3473ebe50a55279a 819 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 688 696 - T 13-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 BEN78_00325 b623b577039ef2ac3473ebe50a55279a 819 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 354 490 2.9E-17 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BEN78_00325 b623b577039ef2ac3473ebe50a55279a 819 SUPERFAMILY SSF88697 11 202 3.23E-47 T 13-10-2018 IPR015947 PUA-like superfamily BEN78_00325 b623b577039ef2ac3473ebe50a55279a 819 Gene3D G3DSA:3.30.230.10 597 784 1.5E-81 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BEN78_00325 b623b577039ef2ac3473ebe50a55279a 819 SUPERFAMILY SSF52540 315 599 2.68E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_00325 b623b577039ef2ac3473ebe50a55279a 819 PIRSF PIRSF001174 2 787 0.0 T 13-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 BEN78_00325 b623b577039ef2ac3473ebe50a55279a 819 Gene3D G3DSA:1.10.8.60 493 596 2.0E-31 T 13-10-2018 BEN78_00325 b623b577039ef2ac3473ebe50a55279a 819 Hamap MF_01973 Lon protease [lon]. 12 784 72.238 T 13-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 BEN78_00325 b623b577039ef2ac3473ebe50a55279a 819 TIGRFAM TIGR00763 lon: endopeptidase La 13 783 4.9E-302 T 13-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 BEN78_00325 b623b577039ef2ac3473ebe50a55279a 819 Gene3D G3DSA:2.30.130.40 2 114 4.3E-33 T 13-10-2018 BEN78_00325 b623b577039ef2ac3473ebe50a55279a 819 Gene3D G3DSA:1.20.58.1480 123 247 2.3E-42 T 13-10-2018 BEN78_02345 8f9f741fed05af04f11ac510e13e5fac 403 SUPERFAMILY SSF55973 3 109 5.89E-46 T 13-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BEN78_02345 8f9f741fed05af04f11ac510e13e5fac 403 SUPERFAMILY SSF55973 235 400 7.46E-67 T 13-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BEN78_02345 8f9f741fed05af04f11ac510e13e5fac 403 PIRSF PIRSF000497 1 401 6.2E-169 T 13-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BEN78_02345 8f9f741fed05af04f11ac510e13e5fac 403 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 400 56.132 T 13-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BEN78_02345 8f9f741fed05af04f11ac510e13e5fac 403 Gene3D G3DSA:3.30.300.10 11 272 3.6E-172 T 13-10-2018 BEN78_02345 8f9f741fed05af04f11ac510e13e5fac 403 SUPERFAMILY SSF55973 110 234 3.92E-48 T 13-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BEN78_02345 8f9f741fed05af04f11ac510e13e5fac 403 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 368 6.8E-182 T 13-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BEN78_02345 8f9f741fed05af04f11ac510e13e5fac 403 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 3 101 1.3E-41 T 13-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BEN78_02345 8f9f741fed05af04f11ac510e13e5fac 403 Gene3D G3DSA:3.30.300.10 5 235 3.6E-172 T 13-10-2018 BEN78_02345 8f9f741fed05af04f11ac510e13e5fac 403 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 261 269 - T 13-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BEN78_02345 8f9f741fed05af04f11ac510e13e5fac 403 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 233 8.2E-44 T 13-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BEN78_02345 8f9f741fed05af04f11ac510e13e5fac 403 Gene3D G3DSA:3.30.300.10 102 391 3.6E-172 T 13-10-2018 BEN78_02345 8f9f741fed05af04f11ac510e13e5fac 403 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 13-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BEN78_02345 8f9f741fed05af04f11ac510e13e5fac 403 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 235 366 1.5E-67 T 13-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BEN78_05680 c2de47636128a8246f21a87443f025af 306 Gene3D G3DSA:3.30.930.10 1 212 9.8E-108 T 13-10-2018 BEN78_05680 c2de47636128a8246f21a87443f025af 306 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 249 265 4.6E-65 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BEN78_05680 c2de47636128a8246f21a87443f025af 306 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 136 156 4.6E-65 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BEN78_05680 c2de47636128a8246f21a87443f025af 306 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 79 99 4.6E-65 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BEN78_05680 c2de47636128a8246f21a87443f025af 306 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 58 73 4.6E-65 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BEN78_05680 c2de47636128a8246f21a87443f025af 306 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 110 134 4.6E-65 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BEN78_05680 c2de47636128a8246f21a87443f025af 306 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 159 174 4.6E-65 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BEN78_05680 c2de47636128a8246f21a87443f025af 306 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 6 288 2.3E-145 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BEN78_05680 c2de47636128a8246f21a87443f025af 306 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 4 289 58.399 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BEN78_05680 c2de47636128a8246f21a87443f025af 306 Gene3D G3DSA:1.20.58.180 213 293 7.2E-33 T 13-10-2018 BEN78_05680 c2de47636128a8246f21a87443f025af 306 SUPERFAMILY SSF55681 5 288 2.79E-131 T 13-10-2018 BEN78_05680 c2de47636128a8246f21a87443f025af 306 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 5 296 8.5E-157 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BEN78_12280 9df8011c2f3ed4d2c038c1305bd6eef5 362 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 51 359 1.3E-124 T 13-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 BEN78_12280 9df8011c2f3ed4d2c038c1305bd6eef5 362 Pfam PF12849 PBP superfamily domain 45 330 2.0E-62 T 13-10-2018 IPR024370 PBP domain BEN78_12280 9df8011c2f3ed4d2c038c1305bd6eef5 362 PIRSF PIRSF002756 6 360 5.4E-110 T 13-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 BEN78_12280 9df8011c2f3ed4d2c038c1305bd6eef5 362 Gene3D G3DSA:3.40.190.10 125 301 3.9E-128 T 13-10-2018 BEN78_12280 9df8011c2f3ed4d2c038c1305bd6eef5 362 Gene3D G3DSA:3.40.190.10 52 348 3.9E-128 T 13-10-2018 BEN78_12280 9df8011c2f3ed4d2c038c1305bd6eef5 362 SUPERFAMILY SSF53850 51 358 2.28E-98 T 13-10-2018 BEN78_00220 4a73e2a4ceaccf7390c8d10a53a7ac2f 390 Pfam PF04773 FecR protein 162 249 3.4E-20 T 13-10-2018 IPR006860 FecR protein BEN78_00220 4a73e2a4ceaccf7390c8d10a53a7ac2f 390 Pfam PF16220 Domain of unknown function (DUF4880) 20 59 2.5E-11 T 13-10-2018 IPR032623 FecR, N-terminal BEN78_00220 4a73e2a4ceaccf7390c8d10a53a7ac2f 390 Gene3D G3DSA:3.55.50.30 294 369 3.0E-7 T 13-10-2018 BEN78_00220 4a73e2a4ceaccf7390c8d10a53a7ac2f 390 Gene3D G3DSA:2.60.120.1440 153 281 7.7E-24 T 13-10-2018 BEN78_10080 754e3bc9a40f1594b4afb4df39e80051 176 SMART SM00260 29 166 9.4E-13 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BEN78_10080 754e3bc9a40f1594b4afb4df39e80051 176 SUPERFAMILY SSF50341 32 171 9.42E-25 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 BEN78_10080 754e3bc9a40f1594b4afb4df39e80051 176 Pfam PF01584 CheW-like domain 35 168 6.6E-24 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BEN78_10080 754e3bc9a40f1594b4afb4df39e80051 176 Gene3D G3DSA:2.40.50.180 52 118 3.8E-17 T 13-10-2018 BEN78_10080 754e3bc9a40f1594b4afb4df39e80051 176 Gene3D G3DSA:2.30.30.40 38 147 3.8E-17 T 13-10-2018 BEN78_04365 e8a1e132be2a3758f506fadd842458c5 426 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 401 6.1E-5 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_04365 e8a1e132be2a3758f506fadd842458c5 426 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 367 6.1E-5 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_04365 e8a1e132be2a3758f506fadd842458c5 426 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 420 6.1E-5 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_04365 e8a1e132be2a3758f506fadd842458c5 426 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 326 419 2.3E-13 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_04365 e8a1e132be2a3758f506fadd842458c5 426 SUPERFAMILY SSF47384 193 272 2.55E-13 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN78_04365 e8a1e132be2a3758f506fadd842458c5 426 SMART SM00387 320 423 7.7E-15 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_04365 e8a1e132be2a3758f506fadd842458c5 426 SUPERFAMILY SSF55874 283 418 9.95E-24 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_04365 e8a1e132be2a3758f506fadd842458c5 426 Gene3D G3DSA:1.10.287.130 159 275 6.1E-18 T 13-10-2018 BEN78_04365 e8a1e132be2a3758f506fadd842458c5 426 SMART SM00388 210 276 2.5E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_04365 e8a1e132be2a3758f506fadd842458c5 426 Gene3D G3DSA:3.30.565.10 276 421 8.6E-24 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_04365 e8a1e132be2a3758f506fadd842458c5 426 Pfam PF00512 His Kinase A (phospho-acceptor) domain 212 273 5.7E-10 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_04230 581265fed2b33d9766ac71ac25c63d82 348 Gene3D G3DSA:3.40.50.150 158 348 4.1E-43 T 13-10-2018 BEN78_04230 581265fed2b33d9766ac71ac25c63d82 348 Pfam PF05175 Methyltransferase small domain 174 342 7.0E-48 T 13-10-2018 IPR007848 Methyltransferase small domain GO:0008168 BEN78_04230 581265fed2b33d9766ac71ac25c63d82 348 SUPERFAMILY SSF53335 168 343 4.34E-21 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_04230 581265fed2b33d9766ac71ac25c63d82 348 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 274 280 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BEN78_14590 9bbf34e372a25adabd58b8738834bcf3 95 Gene3D G3DSA:1.10.260.40 17 91 1.5E-11 T 13-10-2018 BEN78_14590 9bbf34e372a25adabd58b8738834bcf3 95 SMART SM00530 31 86 1.9E-9 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN78_14590 9bbf34e372a25adabd58b8738834bcf3 95 SUPERFAMILY SSF47413 27 85 3.49E-11 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN78_14590 9bbf34e372a25adabd58b8738834bcf3 95 Pfam PF13560 Helix-turn-helix domain 29 84 1.8E-13 T 13-10-2018 BEN78_07595 4e9897a10b8300c65e7464fab54a1161 267 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 265 6.1E-68 T 13-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 BEN78_07595 4e9897a10b8300c65e7464fab54a1161 267 Gene3D G3DSA:3.60.10.10 1 266 9.1E-79 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BEN78_07595 4e9897a10b8300c65e7464fab54a1161 267 SUPERFAMILY SSF56219 1 265 4.58E-72 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BEN78_07595 4e9897a10b8300c65e7464fab54a1161 267 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 258 4.7E-15 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase BEN78_07595 4e9897a10b8300c65e7464fab54a1161 267 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 28 37 - T 13-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 BEN78_07595 4e9897a10b8300c65e7464fab54a1161 267 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 263 4.6E-62 T 13-10-2018 BEN78_11975 716d605ee299c659f58104bdd3c57a09 539 Pfam PF13185 GAF domain 226 360 8.9E-12 T 13-10-2018 IPR003018 GAF domain GO:0005515 BEN78_11975 716d605ee299c659f58104bdd3c57a09 539 Gene3D G3DSA:1.20.1440.210 25 151 6.4E-12 T 13-10-2018 BEN78_11975 716d605ee299c659f58104bdd3c57a09 539 SUPERFAMILY SSF55781 228 372 4.1E-14 T 13-10-2018 BEN78_11975 716d605ee299c659f58104bdd3c57a09 539 SMART SM00065 193 370 0.0014 T 13-10-2018 IPR003018 GAF domain GO:0005515 BEN78_11975 716d605ee299c659f58104bdd3c57a09 539 Pfam PF00990 Diguanylate cyclase, GGDEF domain 374 531 2.2E-48 T 13-10-2018 IPR000160 GGDEF domain BEN78_11975 716d605ee299c659f58104bdd3c57a09 539 SUPERFAMILY SSF55073 378 535 5.57E-49 T 13-10-2018 IPR029787 Nucleotide cyclase BEN78_11975 716d605ee299c659f58104bdd3c57a09 539 Gene3D G3DSA:3.30.70.270 370 538 2.2E-59 T 13-10-2018 BEN78_11975 716d605ee299c659f58104bdd3c57a09 539 SMART SM00267 362 535 4.5E-63 T 13-10-2018 IPR000160 GGDEF domain BEN78_11975 716d605ee299c659f58104bdd3c57a09 539 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 370 533 3.2E-55 T 13-10-2018 IPR000160 GGDEF domain BEN78_11975 716d605ee299c659f58104bdd3c57a09 539 Gene3D G3DSA:3.30.450.40 200 369 5.9E-14 T 13-10-2018 IPR029016 GAF-like domain superfamily BEN78_11975 716d605ee299c659f58104bdd3c57a09 539 Pfam PF05227 CHASE3 domain 18 152 1.6E-15 T 13-10-2018 IPR007891 CHASE3 BEN78_00255 5a0fe3b43c9cf4ad128e80add660bfad 440 Hamap MF_00900 GTPase HflX [hflX]. 27 395 47.417 T 13-10-2018 IPR016496 GTPase HflX GO:0005525 BEN78_00255 5a0fe3b43c9cf4ad128e80add660bfad 440 SUPERFAMILY SSF52540 199 366 1.06E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_00255 5a0fe3b43c9cf4ad128e80add660bfad 440 Pfam PF16360 GTP-binding GTPase Middle Region 114 193 5.1E-26 T 13-10-2018 IPR032305 GTP-binding protein, middle domain BEN78_00255 5a0fe3b43c9cf4ad128e80add660bfad 440 PIRSF PIRSF006809 3 426 1.0E-137 T 13-10-2018 IPR016496 GTPase HflX GO:0005525 BEN78_00255 5a0fe3b43c9cf4ad128e80add660bfad 440 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 201 221 6.3E-12 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 BEN78_00255 5a0fe3b43c9cf4ad128e80add660bfad 440 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 6.3E-12 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 BEN78_00255 5a0fe3b43c9cf4ad128e80add660bfad 440 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 222 240 6.3E-12 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 BEN78_00255 5a0fe3b43c9cf4ad128e80add660bfad 440 Gene3D G3DSA:3.40.50.11060 21 138 6.2E-37 T 13-10-2018 BEN78_00255 5a0fe3b43c9cf4ad128e80add660bfad 440 Pfam PF01926 50S ribosome-binding GTPase 200 318 4.3E-22 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 BEN78_00255 5a0fe3b43c9cf4ad128e80add660bfad 440 Gene3D G3DSA:3.40.50.300 198 369 6.6E-42 T 13-10-2018 BEN78_00255 5a0fe3b43c9cf4ad128e80add660bfad 440 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 11 365 3.6E-142 T 13-10-2018 IPR016496 GTPase HflX GO:0005525 BEN78_00255 5a0fe3b43c9cf4ad128e80add660bfad 440 Pfam PF13167 GTP-binding GTPase N-terminal 27 112 3.7E-28 T 13-10-2018 IPR025121 GTPase HflX, N-terminal BEN78_03235 f91649d01cfa8d95995cc94a86c0d7e2 120 SMART SM00528 74 119 2.2E-15 T 13-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 BEN78_03235 f91649d01cfa8d95995cc94a86c0d7e2 120 SUPERFAMILY SSF81273 78 119 4.32E-13 T 13-10-2018 BEN78_03235 f91649d01cfa8d95995cc94a86c0d7e2 120 Gene3D G3DSA:4.10.430.10 72 120 6.0E-18 T 13-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 BEN78_03235 f91649d01cfa8d95995cc94a86c0d7e2 120 Pfam PF00816 H-NS histone family 12 113 1.9E-22 T 13-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 BEN78_06350 4c8a39ad0f42913329e15c0ce8bf3736 144 Pfam PF00072 Response regulator receiver domain 6 129 3.7E-16 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_06350 4c8a39ad0f42913329e15c0ce8bf3736 144 Gene3D G3DSA:3.40.50.2300 1 141 4.8E-31 T 13-10-2018 BEN78_06350 4c8a39ad0f42913329e15c0ce8bf3736 144 SMART SM00448 4 129 2.8E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_06350 4c8a39ad0f42913329e15c0ce8bf3736 144 SUPERFAMILY SSF52172 2 132 2.99E-30 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_16170 85a8649f1208417fd3d5620dd11c80cd 321 Gene3D G3DSA:3.30.420.40 120 295 1.1E-69 T 13-10-2018 BEN78_16170 85a8649f1208417fd3d5620dd11c80cd 321 Gene3D G3DSA:3.30.420.40 7 308 1.1E-69 T 13-10-2018 BEN78_16170 85a8649f1208417fd3d5620dd11c80cd 321 SUPERFAMILY SSF53067 5 114 2.27E-18 T 13-10-2018 BEN78_16170 85a8649f1208417fd3d5620dd11c80cd 321 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 8 306 5.4E-40 T 13-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 BEN78_16170 85a8649f1208417fd3d5620dd11c80cd 321 SUPERFAMILY SSF53067 120 315 2.16E-46 T 13-10-2018 BEN78_02220 67169ae543beee5cce23e3b710ae41d6 180 Pfam PF13673 Acetyltransferase (GNAT) domain 47 148 8.8E-7 T 13-10-2018 IPR000182 GNAT domain BEN78_02220 67169ae543beee5cce23e3b710ae41d6 180 Gene3D G3DSA:3.40.630.30 1 169 1.3E-21 T 13-10-2018 BEN78_02220 67169ae543beee5cce23e3b710ae41d6 180 SUPERFAMILY SSF55729 7 156 8.15E-22 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN78_11485 54b309aeef1fd65d938d93a6805dd592 557 SUPERFAMILY SSF111326 6 556 9.94E-259 T 13-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BEN78_11485 54b309aeef1fd65d938d93a6805dd592 557 Hamap MF_00577 Urocanate hydratase [hutU]. 6 557 50.098 T 13-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BEN78_11485 54b309aeef1fd65d938d93a6805dd592 557 Pfam PF01175 Urocanase Rossmann-like domain 142 349 2.3E-84 T 13-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BEN78_11485 54b309aeef1fd65d938d93a6805dd592 557 Gene3D G3DSA:3.40.1770.10 18 543 3.4E-255 T 13-10-2018 BEN78_11485 54b309aeef1fd65d938d93a6805dd592 557 Pfam PF17391 Urocanase N-terminal domain 13 139 4.9E-62 T 13-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BEN78_11485 54b309aeef1fd65d938d93a6805dd592 557 ProSitePatterns PS01233 Urocanase signature. 443 458 - T 13-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BEN78_11485 54b309aeef1fd65d938d93a6805dd592 557 PIRSF PIRSF001423 1 557 1.5E-289 T 13-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BEN78_11485 54b309aeef1fd65d938d93a6805dd592 557 TIGRFAM TIGR01228 hutU: urocanate hydratase 12 555 1.1E-292 T 13-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BEN78_11485 54b309aeef1fd65d938d93a6805dd592 557 Gene3D G3DSA:3.40.50.10730 143 350 3.4E-255 T 13-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BEN78_11485 54b309aeef1fd65d938d93a6805dd592 557 Pfam PF17392 Urocanase C-terminal domain 353 547 4.4E-91 T 13-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BEN78_05750 b55836363a47e17b5b954f1b7a810dea 399 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 14 397 9.2E-176 T 13-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 BEN78_05750 b55836363a47e17b5b954f1b7a810dea 399 Gene3D G3DSA:3.40.50.20 2 123 1.3E-52 T 13-10-2018 BEN78_05750 b55836363a47e17b5b954f1b7a810dea 399 Gene3D G3DSA:3.30.470.20 198 399 2.2E-58 T 13-10-2018 BEN78_05750 b55836363a47e17b5b954f1b7a810dea 399 SUPERFAMILY SSF56059 114 314 4.95E-58 T 13-10-2018 BEN78_05750 b55836363a47e17b5b954f1b7a810dea 399 SUPERFAMILY SSF52440 3 113 2.45E-33 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BEN78_05750 b55836363a47e17b5b954f1b7a810dea 399 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 8 397 51.8 T 13-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 BEN78_05750 b55836363a47e17b5b954f1b7a810dea 399 Pfam PF02222 ATP-grasp domain 124 296 2.9E-56 T 13-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type BEN78_05750 b55836363a47e17b5b954f1b7a810dea 399 SUPERFAMILY SSF51246 325 396 7.85E-14 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 BEN78_05750 b55836363a47e17b5b954f1b7a810dea 399 Gene3D G3DSA:3.30.1490.20 124 197 9.7E-32 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BEN78_13165 c903afa1e2d2e335ae0a006a6ab63c5f 432 Gene3D G3DSA:1.10.8.60 289 355 1.1E-17 T 13-10-2018 BEN78_13165 c903afa1e2d2e335ae0a006a6ab63c5f 432 SUPERFAMILY SSF52540 135 352 6.2E-40 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_13165 c903afa1e2d2e335ae0a006a6ab63c5f 432 SUPERFAMILY SSF46689 330 420 3.4E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN78_13165 c903afa1e2d2e335ae0a006a6ab63c5f 432 Gene3D G3DSA:3.40.50.300 134 288 4.9E-35 T 13-10-2018 BEN78_13165 c903afa1e2d2e335ae0a006a6ab63c5f 432 Gene3D G3DSA:1.10.10.60 378 419 3.7E-9 T 13-10-2018 BEN78_13165 c903afa1e2d2e335ae0a006a6ab63c5f 432 Gene3D G3DSA:3.40.50.2300 1 122 3.9E-20 T 13-10-2018 BEN78_13165 c903afa1e2d2e335ae0a006a6ab63c5f 432 SUPERFAMILY SSF52172 1 180 1.85E-27 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_13165 c903afa1e2d2e335ae0a006a6ab63c5f 432 Pfam PF00072 Response regulator receiver domain 6 112 1.8E-15 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_13165 c903afa1e2d2e335ae0a006a6ab63c5f 432 SMART SM00382 156 283 3.8E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_13165 c903afa1e2d2e335ae0a006a6ab63c5f 432 Pfam PF00158 Sigma-54 interaction domain 136 285 8.5E-27 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BEN78_13165 c903afa1e2d2e335ae0a006a6ab63c5f 432 SMART SM00448 4 114 8.4E-15 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_13165 c903afa1e2d2e335ae0a006a6ab63c5f 432 Pfam PF02954 Bacterial regulatory protein, Fis family 379 419 5.4E-8 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BEN78_01760 c77df9c5545dde2f1077c1494044b7ae 119 Gene3D G3DSA:1.10.1900.20 56 118 3.5E-27 T 13-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_01760 c77df9c5545dde2f1077c1494044b7ae 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.4E-47 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_01760 c77df9c5545dde2f1077c1494044b7ae 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.0 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_01760 c77df9c5545dde2f1077c1494044b7ae 119 Pfam PF00453 Ribosomal protein L20 3 109 1.1E-46 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_01760 c77df9c5545dde2f1077c1494044b7ae 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.7E-38 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_01760 c77df9c5545dde2f1077c1494044b7ae 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.7E-38 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_01760 c77df9c5545dde2f1077c1494044b7ae 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.7E-38 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_01760 c77df9c5545dde2f1077c1494044b7ae 119 Gene3D G3DSA:1.10.720.90 2 55 2.5E-21 T 13-10-2018 BEN78_01760 c77df9c5545dde2f1077c1494044b7ae 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 70 2.0E-19 T 13-10-2018 BEN78_01760 c77df9c5545dde2f1077c1494044b7ae 119 SUPERFAMILY SSF74731 3 117 1.96E-47 T 13-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_01760 c77df9c5545dde2f1077c1494044b7ae 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_07390 4bc8a00e908583283d08e8cc35e87652 59 Pfam PF09791 Oxidoreductase-like protein, N-terminal 13 52 3.6E-12 T 13-10-2018 IPR019180 Oxidoreductase-like, N-terminal BEN78_03860 d2a6975ccb52e718b2c50fc74dba2992 702 SUPERFAMILY SSF50993 28 439 4.45E-56 T 13-10-2018 BEN78_03860 d2a6975ccb52e718b2c50fc74dba2992 702 Pfam PF00326 Prolyl oligopeptidase family 499 701 2.1E-51 T 13-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 BEN78_03860 d2a6975ccb52e718b2c50fc74dba2992 702 Gene3D G3DSA:2.130.10.120 80 434 5.3E-145 T 13-10-2018 BEN78_03860 d2a6975ccb52e718b2c50fc74dba2992 702 Gene3D G3DSA:3.40.50.1820 28 663 5.3E-145 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_03860 d2a6975ccb52e718b2c50fc74dba2992 702 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 529 548 2.1E-45 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BEN78_03860 d2a6975ccb52e718b2c50fc74dba2992 702 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 559 579 2.1E-45 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BEN78_03860 d2a6975ccb52e718b2c50fc74dba2992 702 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 633 655 2.1E-45 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BEN78_03860 d2a6975ccb52e718b2c50fc74dba2992 702 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 614 629 2.1E-45 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BEN78_03860 d2a6975ccb52e718b2c50fc74dba2992 702 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 474 492 2.1E-45 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BEN78_03860 d2a6975ccb52e718b2c50fc74dba2992 702 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 501 525 2.1E-45 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BEN78_03860 d2a6975ccb52e718b2c50fc74dba2992 702 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 25 424 1.0E-31 T 13-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 BEN78_03860 d2a6975ccb52e718b2c50fc74dba2992 702 SUPERFAMILY SSF53474 443 700 1.85E-54 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_05115 50dab44d27648e52c4cf3904c2c126ba 274 SUPERFAMILY SSF53474 8 273 8.37E-69 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_05115 50dab44d27648e52c4cf3904c2c126ba 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 92 105 2.0E-11 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN78_05115 50dab44d27648e52c4cf3904c2c126ba 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 217 231 2.0E-11 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN78_05115 50dab44d27648e52c4cf3904c2c126ba 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 48 63 2.0E-11 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN78_05115 50dab44d27648e52c4cf3904c2c126ba 274 Gene3D G3DSA:3.40.50.1820 2 272 3.0E-79 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_05115 50dab44d27648e52c4cf3904c2c126ba 274 PRINTS PR00412 Epoxide hydrolase signature 249 271 1.7E-6 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BEN78_05115 50dab44d27648e52c4cf3904c2c126ba 274 PRINTS PR00412 Epoxide hydrolase signature 28 46 1.7E-6 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BEN78_05115 50dab44d27648e52c4cf3904c2c126ba 274 PRINTS PR00412 Epoxide hydrolase signature 48 63 1.7E-6 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BEN78_05115 50dab44d27648e52c4cf3904c2c126ba 274 Pfam PF00561 alpha/beta hydrolase fold 23 257 1.7E-33 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN78_00235 13d1bad8ce07823dcc7e6b9b4424fe07 430 Gene3D G3DSA:3.90.170.10 267 430 3.2E-69 T 13-10-2018 BEN78_00235 13d1bad8ce07823dcc7e6b9b4424fe07 430 SUPERFAMILY SSF52540 4 429 1.49E-173 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_00235 13d1bad8ce07823dcc7e6b9b4424fe07 430 Gene3D G3DSA:3.40.440.10 6 249 3.0E-97 T 13-10-2018 BEN78_00235 13d1bad8ce07823dcc7e6b9b4424fe07 430 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 13-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BEN78_00235 13d1bad8ce07823dcc7e6b9b4424fe07 430 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 13-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BEN78_00235 13d1bad8ce07823dcc7e6b9b4424fe07 430 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 429 3.6E-175 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BEN78_00235 13d1bad8ce07823dcc7e6b9b4424fe07 430 Gene3D G3DSA:1.10.300.10 102 201 3.0E-97 T 13-10-2018 BEN78_00235 13d1bad8ce07823dcc7e6b9b4424fe07 430 Pfam PF00709 Adenylosuccinate synthetase 5 422 1.4E-175 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BEN78_00235 13d1bad8ce07823dcc7e6b9b4424fe07 430 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 430 206.985 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BEN78_00235 13d1bad8ce07823dcc7e6b9b4424fe07 430 SMART SM00788 4 424 5.4E-286 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BEN78_14385 6c82acbb6d9cbe68260c5ebf64da39b7 260 Pfam PF07238 PilZ domain 130 247 2.9E-8 T 13-10-2018 IPR009875 PilZ domain GO:0035438 BEN78_14385 6c82acbb6d9cbe68260c5ebf64da39b7 260 Hamap MF_01457 Flagellar brake protein YcgR [ycgR]. 18 256 24.577 T 13-10-2018 IPR023787 Type III secretion system flagellar brake protein YcgR GO:0035438|GO:0071945 BEN78_14385 6c82acbb6d9cbe68260c5ebf64da39b7 260 Pfam PF07317 Flagellar regulator YcgR 23 128 5.0E-19 T 13-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal BEN78_14385 6c82acbb6d9cbe68260c5ebf64da39b7 260 Gene3D G3DSA:2.40.10.220 131 251 2.6E-19 T 13-10-2018 BEN78_06750 14b11279825334c93617d8a7863e5ea4 262 Pfam PF02602 Uroporphyrinogen-III synthase HemD 27 248 8.6E-22 T 13-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BEN78_06750 14b11279825334c93617d8a7863e5ea4 262 Gene3D G3DSA:3.40.50.10090 18 243 2.3E-40 T 13-10-2018 BEN78_06750 14b11279825334c93617d8a7863e5ea4 262 SUPERFAMILY SSF69618 13 251 4.05E-34 T 13-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BEN78_06750 14b11279825334c93617d8a7863e5ea4 262 Gene3D G3DSA:3.40.50.10090 46 169 2.3E-40 T 13-10-2018 BEN78_04485 7575f05f0f117dbae0166be9a8553356 207 SMART SM00345 11 69 4.7E-4 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN78_04485 7575f05f0f117dbae0166be9a8553356 207 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 69 2.3E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN78_04485 7575f05f0f117dbae0166be9a8553356 207 SUPERFAMILY SSF46785 10 71 9.35E-11 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_04485 7575f05f0f117dbae0166be9a8553356 207 Gene3D G3DSA:1.10.10.10 2 70 3.1E-11 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_05405 be18774fa67892e06a3d7dddb95972e1 436 SUPERFAMILY SSF55785 127 237 2.3E-7 T 13-10-2018 IPR035965 PAS domain superfamily BEN78_05405 be18774fa67892e06a3d7dddb95972e1 436 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 10 129 6.2E-17 T 13-10-2018 IPR000014 PAS domain BEN78_05405 be18774fa67892e06a3d7dddb95972e1 436 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 253 426 8.0E-47 T 13-10-2018 IPR000160 GGDEF domain BEN78_05405 be18774fa67892e06a3d7dddb95972e1 436 Gene3D G3DSA:3.30.70.270 248 428 1.0E-55 T 13-10-2018 BEN78_05405 be18774fa67892e06a3d7dddb95972e1 436 Pfam PF08448 PAS fold 139 241 2.5E-6 T 13-10-2018 IPR013656 PAS fold-4 BEN78_05405 be18774fa67892e06a3d7dddb95972e1 436 Pfam PF08448 PAS fold 18 127 1.2E-16 T 13-10-2018 IPR013656 PAS fold-4 BEN78_05405 be18774fa67892e06a3d7dddb95972e1 436 Pfam PF00990 Diguanylate cyclase, GGDEF domain 258 424 3.2E-40 T 13-10-2018 IPR000160 GGDEF domain BEN78_05405 be18774fa67892e06a3d7dddb95972e1 436 SMART SM00086 85 127 1.9E-5 T 13-10-2018 IPR001610 PAC motif BEN78_05405 be18774fa67892e06a3d7dddb95972e1 436 Gene3D G3DSA:3.30.450.20 128 247 1.4E-15 T 13-10-2018 BEN78_05405 be18774fa67892e06a3d7dddb95972e1 436 Gene3D G3DSA:3.30.450.20 8 127 7.7E-22 T 13-10-2018 BEN78_05405 be18774fa67892e06a3d7dddb95972e1 436 SUPERFAMILY SSF55073 263 426 1.26E-41 T 13-10-2018 IPR029787 Nucleotide cyclase BEN78_05405 be18774fa67892e06a3d7dddb95972e1 436 SMART SM00267 246 428 2.7E-55 T 13-10-2018 IPR000160 GGDEF domain BEN78_05405 be18774fa67892e06a3d7dddb95972e1 436 SUPERFAMILY SSF55785 8 125 1.68E-23 T 13-10-2018 IPR035965 PAS domain superfamily BEN78_05405 be18774fa67892e06a3d7dddb95972e1 436 SMART SM00091 132 196 17.0 T 13-10-2018 IPR000014 PAS domain BEN78_05405 be18774fa67892e06a3d7dddb95972e1 436 SMART SM00091 12 78 8.1E-11 T 13-10-2018 IPR000014 PAS domain BEN78_00020 60824bde6e8016ba8643b80fa35be539 223 Pfam PF00440 Bacterial regulatory proteins, tetR family 30 77 2.6E-7 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN78_00020 60824bde6e8016ba8643b80fa35be539 223 Gene3D G3DSA:1.10.10.60 18 67 2.8E-13 T 13-10-2018 BEN78_00020 60824bde6e8016ba8643b80fa35be539 223 Gene3D G3DSA:1.10.357.10 68 221 8.9E-24 T 13-10-2018 BEN78_00020 60824bde6e8016ba8643b80fa35be539 223 SUPERFAMILY SSF46689 26 86 3.59E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN78_16840 60824bde6e8016ba8643b80fa35be539 223 Pfam PF00440 Bacterial regulatory proteins, tetR family 30 77 2.6E-7 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN78_16840 60824bde6e8016ba8643b80fa35be539 223 Gene3D G3DSA:1.10.10.60 18 67 2.8E-13 T 13-10-2018 BEN78_16840 60824bde6e8016ba8643b80fa35be539 223 Gene3D G3DSA:1.10.357.10 68 221 8.9E-24 T 13-10-2018 BEN78_16840 60824bde6e8016ba8643b80fa35be539 223 SUPERFAMILY SSF46689 26 86 3.59E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN78_11240 fb0535a97ef680cd6257e3549da096df 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 110 8.0E-36 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BEN78_11240 fb0535a97ef680cd6257e3549da096df 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 44 56 8.0E-36 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BEN78_11240 fb0535a97ef680cd6257e3549da096df 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 18 33 8.0E-36 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BEN78_11240 fb0535a97ef680cd6257e3549da096df 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 83 98 8.0E-36 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BEN78_11240 fb0535a97ef680cd6257e3549da096df 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 111 126 8.0E-36 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BEN78_11240 fb0535a97ef680cd6257e3549da096df 164 Gene3D G3DSA:2.40.100.10 2 144 1.3E-62 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily BEN78_11240 fb0535a97ef680cd6257e3549da096df 164 SUPERFAMILY SSF50891 5 141 2.48E-58 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily BEN78_11240 fb0535a97ef680cd6257e3549da096df 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 6 135 2.4E-51 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BEN78_11240 fb0535a97ef680cd6257e3549da096df 164 PIRSF PIRSF001467 1 157 1.4E-57 T 13-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 BEN78_11240 fb0535a97ef680cd6257e3549da096df 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 39 56 - T 13-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 BEN78_01710 4126e046794d22a27c2d005898aa2c3b 637 SUPERFAMILY SSF52922 493 619 4.84E-30 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BEN78_01710 4126e046794d22a27c2d005898aa2c3b 637 Gene3D G3DSA:3.40.50.920 497 621 2.1E-38 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BEN78_01710 4126e046794d22a27c2d005898aa2c3b 637 SUPERFAMILY SSF52518 297 483 5.6E-60 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold BEN78_01710 4126e046794d22a27c2d005898aa2c3b 637 ProSitePatterns PS00802 Transketolase signature 2. 427 443 - T 13-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BEN78_01710 4126e046794d22a27c2d005898aa2c3b 637 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 9 622 45.567 T 13-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BEN78_01710 4126e046794d22a27c2d005898aa2c3b 637 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 10 284 4.0E-114 T 13-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BEN78_01710 4126e046794d22a27c2d005898aa2c3b 637 SUPERFAMILY SSF52518 7 351 4.47E-74 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold BEN78_01710 4126e046794d22a27c2d005898aa2c3b 637 Pfam PF02779 Transketolase, pyrimidine binding domain 320 480 2.7E-37 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BEN78_01710 4126e046794d22a27c2d005898aa2c3b 637 Pfam PF02780 Transketolase, C-terminal domain 497 613 1.2E-25 T 13-10-2018 IPR033248 Transketolase, C-terminal domain BEN78_01710 4126e046794d22a27c2d005898aa2c3b 637 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 11 618 2.4E-259 T 13-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BEN78_01710 4126e046794d22a27c2d005898aa2c3b 637 SMART SM00861 321 485 1.6E-62 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BEN78_01710 4126e046794d22a27c2d005898aa2c3b 637 ProSitePatterns PS00801 Transketolase signature 1. 35 54 - T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BEN78_01710 4126e046794d22a27c2d005898aa2c3b 637 Gene3D G3DSA:3.40.50.970 319 489 6.3E-65 T 13-10-2018 BEN78_03810 c0d5423cbfe2e7464b8ec519a6cacbb9 124 SUPERFAMILY SSF89360 19 113 1.35E-30 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 BEN78_03810 c0d5423cbfe2e7464b8ec519a6cacbb9 124 Gene3D G3DSA:2.60.300.12 18 124 1.9E-34 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 BEN78_03810 c0d5423cbfe2e7464b8ec519a6cacbb9 124 Pfam PF01521 Iron-sulphur cluster biosynthesis 19 119 3.4E-20 T 13-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 BEN78_03810 c0d5423cbfe2e7464b8ec519a6cacbb9 124 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 105 122 - T 13-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 BEN78_03810 c0d5423cbfe2e7464b8ec519a6cacbb9 124 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 20 124 7.3E-38 T 13-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 BEN78_03810 c0d5423cbfe2e7464b8ec519a6cacbb9 124 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 124 34.648 T 13-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 BEN78_13065 bdb223eb25ddbef67f6693aafdd28b60 421 Gene3D G3DSA:1.10.3860.10 1 411 1.4E-80 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BEN78_13065 bdb223eb25ddbef67f6693aafdd28b60 421 Pfam PF00375 Sodium:dicarboxylate symporter family 5 405 1.8E-71 T 13-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BEN78_13065 bdb223eb25ddbef67f6693aafdd28b60 421 PRINTS PR00173 Glutamate-aspartate symporter signature 360 380 2.0E-19 T 13-10-2018 BEN78_13065 bdb223eb25ddbef67f6693aafdd28b60 421 PRINTS PR00173 Glutamate-aspartate symporter signature 1 21 2.0E-19 T 13-10-2018 BEN78_13065 bdb223eb25ddbef67f6693aafdd28b60 421 PRINTS PR00173 Glutamate-aspartate symporter signature 46 66 2.0E-19 T 13-10-2018 BEN78_13065 bdb223eb25ddbef67f6693aafdd28b60 421 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 2.0E-19 T 13-10-2018 BEN78_13065 bdb223eb25ddbef67f6693aafdd28b60 421 PRINTS PR00173 Glutamate-aspartate symporter signature 334 353 2.0E-19 T 13-10-2018 BEN78_13065 bdb223eb25ddbef67f6693aafdd28b60 421 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 2.0E-19 T 13-10-2018 BEN78_13065 bdb223eb25ddbef67f6693aafdd28b60 421 SUPERFAMILY SSF118215 5 405 7.98E-66 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BEN78_04715 19a17d51ad2029c2c69b4e59a0486f4f 882 Gene3D G3DSA:2.40.170.20 172 882 2.8E-50 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_04715 19a17d51ad2029c2c69b4e59a0486f4f 882 Pfam PF00593 TonB dependent receptor 414 879 4.2E-33 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_04715 19a17d51ad2029c2c69b4e59a0486f4f 882 SUPERFAMILY SSF56935 28 882 3.14E-90 T 13-10-2018 BEN78_04715 19a17d51ad2029c2c69b4e59a0486f4f 882 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 166 9.7E-16 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_04715 19a17d51ad2029c2c69b4e59a0486f4f 882 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 37 882 9.3E-177 T 13-10-2018 IPR010104 Bacterial TonB-dependent receptor BEN78_04715 19a17d51ad2029c2c69b4e59a0486f4f 882 Gene3D G3DSA:2.170.130.10 28 170 1.3E-15 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_06615 8c24cd9669353967225c1a372bd69cec 582 Pfam PF11187 Protein of unknown function (DUF2974) 109 217 1.2E-4 T 13-10-2018 IPR024499 Protein of unknown function DUF2974 BEN78_06615 8c24cd9669353967225c1a372bd69cec 582 SUPERFAMILY SSF53474 101 217 2.51E-13 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_06615 8c24cd9669353967225c1a372bd69cec 582 Gene3D G3DSA:3.40.50.1820 41 221 4.5E-6 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_06615 8c24cd9669353967225c1a372bd69cec 582 Gene3D G3DSA:1.20.120.20 308 581 3.0E-5 T 13-10-2018 BEN78_15295 d10b12ea27d411dfb8397d1143b40b17 406 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 15 404 37.095 T 13-10-2018 IPR017687 Outer membrane protein assembly factor BamB BEN78_15295 d10b12ea27d411dfb8397d1143b40b17 406 SUPERFAMILY SSF50998 53 397 3.53E-77 T 13-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily BEN78_15295 d10b12ea27d411dfb8397d1143b40b17 406 Pfam PF13360 PQQ-like domain 101 331 8.4E-50 T 13-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat BEN78_15295 d10b12ea27d411dfb8397d1143b40b17 406 SMART SM00564 301 332 3.2 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BEN78_15295 d10b12ea27d411dfb8397d1143b40b17 406 SMART SM00564 86 118 0.0062 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BEN78_15295 d10b12ea27d411dfb8397d1143b40b17 406 SMART SM00564 126 158 1.0E-6 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BEN78_15295 d10b12ea27d411dfb8397d1143b40b17 406 SMART SM00564 342 373 290.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BEN78_15295 d10b12ea27d411dfb8397d1143b40b17 406 SMART SM00564 211 243 0.19 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BEN78_15295 d10b12ea27d411dfb8397d1143b40b17 406 SMART SM00564 167 198 47.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BEN78_15295 d10b12ea27d411dfb8397d1143b40b17 406 Gene3D G3DSA:2.130.10.10 43 406 1.8E-94 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BEN78_15295 d10b12ea27d411dfb8397d1143b40b17 406 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 19 403 2.0E-124 T 13-10-2018 IPR017687 Outer membrane protein assembly factor BamB BEN78_12135 6508aabd9243b1ec7d3230de5fa5ccaa 470 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 318 341 - T 13-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site BEN78_12135 6508aabd9243b1ec7d3230de5fa5ccaa 470 Gene3D G3DSA:1.10.3860.10 20 441 5.1E-109 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BEN78_12135 6508aabd9243b1ec7d3230de5fa5ccaa 470 PRINTS PR00173 Glutamate-aspartate symporter signature 94 119 9.4E-27 T 13-10-2018 BEN78_12135 6508aabd9243b1ec7d3230de5fa5ccaa 470 PRINTS PR00173 Glutamate-aspartate symporter signature 315 341 9.4E-27 T 13-10-2018 BEN78_12135 6508aabd9243b1ec7d3230de5fa5ccaa 470 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 9.4E-27 T 13-10-2018 BEN78_12135 6508aabd9243b1ec7d3230de5fa5ccaa 470 PRINTS PR00173 Glutamate-aspartate symporter signature 215 234 9.4E-27 T 13-10-2018 BEN78_12135 6508aabd9243b1ec7d3230de5fa5ccaa 470 PRINTS PR00173 Glutamate-aspartate symporter signature 350 369 9.4E-27 T 13-10-2018 BEN78_12135 6508aabd9243b1ec7d3230de5fa5ccaa 470 Pfam PF00375 Sodium:dicarboxylate symporter family 29 425 2.2E-96 T 13-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BEN78_12135 6508aabd9243b1ec7d3230de5fa5ccaa 470 SUPERFAMILY SSF118215 29 425 3.01E-101 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BEN78_13150 1bbbc26692bb3b424ad03017ec78db98 788 Pfam PF07536 HWE histidine kinase 584 662 4.8E-16 T 13-10-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 BEN78_13150 1bbbc26692bb3b424ad03017ec78db98 788 SMART SM00911 584 668 4.2E-22 T 13-10-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 BEN78_13150 1bbbc26692bb3b424ad03017ec78db98 788 Gene3D G3DSA:3.30.450.40 167 317 8.2E-8 T 13-10-2018 IPR029016 GAF-like domain superfamily BEN78_13150 1bbbc26692bb3b424ad03017ec78db98 788 SMART SM00091 454 523 6.6E-4 T 13-10-2018 IPR000014 PAS domain BEN78_13150 1bbbc26692bb3b424ad03017ec78db98 788 SMART SM00091 329 395 3.3E-11 T 13-10-2018 IPR000014 PAS domain BEN78_13150 1bbbc26692bb3b424ad03017ec78db98 788 SMART SM00086 108 156 340.0 T 13-10-2018 IPR001610 PAC motif BEN78_13150 1bbbc26692bb3b424ad03017ec78db98 788 SMART SM00086 401 442 1.0E-4 T 13-10-2018 IPR001610 PAC motif BEN78_13150 1bbbc26692bb3b424ad03017ec78db98 788 SMART SM00086 528 571 3.4E-6 T 13-10-2018 IPR001610 PAC motif BEN78_13150 1bbbc26692bb3b424ad03017ec78db98 788 SUPERFAMILY SSF55785 315 440 1.39E-28 T 13-10-2018 IPR035965 PAS domain superfamily BEN78_13150 1bbbc26692bb3b424ad03017ec78db98 788 SUPERFAMILY SSF55781 187 317 1.2E-8 T 13-10-2018 BEN78_13150 1bbbc26692bb3b424ad03017ec78db98 788 Pfam PF08447 PAS fold 479 564 4.3E-16 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 BEN78_13150 1bbbc26692bb3b424ad03017ec78db98 788 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 450 573 3.0E-14 T 13-10-2018 IPR000014 PAS domain BEN78_13150 1bbbc26692bb3b424ad03017ec78db98 788 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 326 447 2.0E-23 T 13-10-2018 IPR000014 PAS domain BEN78_13150 1bbbc26692bb3b424ad03017ec78db98 788 Gene3D G3DSA:3.30.450.20 36 166 3.1E-13 T 13-10-2018 BEN78_13150 1bbbc26692bb3b424ad03017ec78db98 788 Gene3D G3DSA:3.30.450.20 318 448 3.1E-31 T 13-10-2018 BEN78_13150 1bbbc26692bb3b424ad03017ec78db98 788 Pfam PF01590 GAF domain 187 314 8.8E-6 T 13-10-2018 IPR003018 GAF domain GO:0005515 BEN78_13150 1bbbc26692bb3b424ad03017ec78db98 788 Gene3D G3DSA:3.30.565.10 641 784 1.5E-5 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_13150 1bbbc26692bb3b424ad03017ec78db98 788 Pfam PF08448 PAS fold 63 156 1.1E-5 T 13-10-2018 IPR013656 PAS fold-4 BEN78_13150 1bbbc26692bb3b424ad03017ec78db98 788 Pfam PF08448 PAS fold 336 444 1.3E-18 T 13-10-2018 IPR013656 PAS fold-4 BEN78_13150 1bbbc26692bb3b424ad03017ec78db98 788 Gene3D G3DSA:3.30.450.20 449 569 9.7E-33 T 13-10-2018 BEN78_13150 1bbbc26692bb3b424ad03017ec78db98 788 SMART SM00065 184 325 1.3E-5 T 13-10-2018 IPR003018 GAF domain GO:0005515 BEN78_13150 1bbbc26692bb3b424ad03017ec78db98 788 SUPERFAMILY SSF55785 439 569 1.05E-24 T 13-10-2018 IPR035965 PAS domain superfamily BEN78_13530 4d8394338d2e8d94ecec1c525ecc1041 301 SUPERFAMILY SSF49493 139 213 5.49E-12 T 13-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 BEN78_13530 4d8394338d2e8d94ecec1c525ecc1041 301 Gene3D G3DSA:2.60.260.20 199 279 4.5E-25 T 13-10-2018 BEN78_13530 4d8394338d2e8d94ecec1c525ecc1041 301 PRINTS PR00625 DnaJ domain signature 61 80 9.7E-22 T 13-10-2018 IPR001623 DnaJ domain BEN78_13530 4d8394338d2e8d94ecec1c525ecc1041 301 PRINTS PR00625 DnaJ domain signature 7 25 9.7E-22 T 13-10-2018 IPR001623 DnaJ domain BEN78_13530 4d8394338d2e8d94ecec1c525ecc1041 301 PRINTS PR00625 DnaJ domain signature 25 40 9.7E-22 T 13-10-2018 IPR001623 DnaJ domain BEN78_13530 4d8394338d2e8d94ecec1c525ecc1041 301 PRINTS PR00625 DnaJ domain signature 41 61 9.7E-22 T 13-10-2018 IPR001623 DnaJ domain BEN78_13530 4d8394338d2e8d94ecec1c525ecc1041 301 SUPERFAMILY SSF46565 1 113 1.57E-30 T 13-10-2018 IPR036869 Chaperone J-domain superfamily BEN78_13530 4d8394338d2e8d94ecec1c525ecc1041 301 Pfam PF00226 DnaJ domain 5 66 6.3E-25 T 13-10-2018 IPR001623 DnaJ domain BEN78_13530 4d8394338d2e8d94ecec1c525ecc1041 301 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 13-10-2018 IPR018253 DnaJ domain, conserved site BEN78_13530 4d8394338d2e8d94ecec1c525ecc1041 301 Pfam PF01556 DnaJ C terminal domain 143 279 6.5E-25 T 13-10-2018 IPR002939 Chaperone DnaJ, C-terminal BEN78_13530 4d8394338d2e8d94ecec1c525ecc1041 301 SUPERFAMILY SSF49493 205 289 1.15E-17 T 13-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 BEN78_13530 4d8394338d2e8d94ecec1c525ecc1041 301 SMART SM00271 4 61 1.0E-27 T 13-10-2018 IPR001623 DnaJ domain BEN78_13530 4d8394338d2e8d94ecec1c525ecc1041 301 Gene3D G3DSA:1.10.287.110 2 129 2.6E-33 T 13-10-2018 IPR036869 Chaperone J-domain superfamily BEN78_13530 4d8394338d2e8d94ecec1c525ecc1041 301 Gene3D G3DSA:2.60.260.20 137 198 3.2E-14 T 13-10-2018 BEN78_14890 7cd2f89dba73b929169aee8222aaff62 211 Pfam PF07883 Cupin domain 133 179 2.6E-8 T 13-10-2018 IPR013096 Cupin 2, conserved barrel BEN78_14890 7cd2f89dba73b929169aee8222aaff62 211 SUPERFAMILY SSF51182 94 190 5.06E-20 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily BEN78_14890 7cd2f89dba73b929169aee8222aaff62 211 Pfam PF13560 Helix-turn-helix domain 8 66 2.2E-9 T 13-10-2018 BEN78_14890 7cd2f89dba73b929169aee8222aaff62 211 SMART SM00530 11 66 7.4E-7 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN78_14890 7cd2f89dba73b929169aee8222aaff62 211 Gene3D G3DSA:1.10.260.40 5 71 1.3E-13 T 13-10-2018 BEN78_14890 7cd2f89dba73b929169aee8222aaff62 211 Gene3D G3DSA:2.60.120.10 77 189 1.9E-21 T 13-10-2018 IPR014710 RmlC-like jelly roll fold BEN78_14890 7cd2f89dba73b929169aee8222aaff62 211 SUPERFAMILY SSF47413 6 72 5.35E-14 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN78_05295 5fb190cdda7a4c6826116f5f6a279282 431 Pfam PF00202 Aminotransferase class-III 35 397 9.3E-77 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BEN78_05295 5fb190cdda7a4c6826116f5f6a279282 431 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 426 1.0E-186 T 13-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 BEN78_05295 5fb190cdda7a4c6826116f5f6a279282 431 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 5 428 103.585 T 13-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 BEN78_05295 5fb190cdda7a4c6826116f5f6a279282 431 Gene3D G3DSA:3.90.1150.10 9 421 3.9E-177 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN78_05295 5fb190cdda7a4c6826116f5f6a279282 431 Gene3D G3DSA:3.40.640.10 71 319 3.9E-177 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN78_05295 5fb190cdda7a4c6826116f5f6a279282 431 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 236 272 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BEN78_05295 5fb190cdda7a4c6826116f5f6a279282 431 SUPERFAMILY SSF53383 1 425 1.77E-129 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_01455 0188413fae681d600afa1a9b9bea7264 473 SUPERFAMILY SSF51556 9 472 2.41E-155 T 13-10-2018 IPR032466 Metal-dependent hydrolase BEN78_01455 0188413fae681d600afa1a9b9bea7264 473 Gene3D G3DSA:3.20.20.140 7 62 1.2E-15 T 13-10-2018 BEN78_01455 0188413fae681d600afa1a9b9bea7264 473 Gene3D G3DSA:3.20.20.140 133 473 5.6E-113 T 13-10-2018 BEN78_01455 0188413fae681d600afa1a9b9bea7264 473 Hamap MF_00675 Uronate isomerase [uxaC]. 6 473 39.161 T 13-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 BEN78_01455 0188413fae681d600afa1a9b9bea7264 473 Pfam PF02614 Glucuronate isomerase 22 468 8.9E-68 T 13-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 BEN78_11200 f360a9996e79d40d638fd8146978b92e 210 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 98 8.0E-31 T 13-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 BEN78_11200 f360a9996e79d40d638fd8146978b92e 210 Gene3D G3DSA:3.10.290.10 98 195 3.3E-77 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BEN78_11200 f360a9996e79d40d638fd8146978b92e 210 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 210 6.7E-76 T 13-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 BEN78_11200 f360a9996e79d40d638fd8146978b92e 210 SUPERFAMILY SSF55174 3 210 4.97E-66 T 13-10-2018 BEN78_11200 f360a9996e79d40d638fd8146978b92e 210 SMART SM01390 3 98 1.2E-44 T 13-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 BEN78_11200 f360a9996e79d40d638fd8146978b92e 210 Pfam PF01479 S4 domain 100 146 6.3E-20 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11200 f360a9996e79d40d638fd8146978b92e 210 ProSitePatterns PS00632 Ribosomal protein S4 signature. 97 121 - T 13-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11200 f360a9996e79d40d638fd8146978b92e 210 Gene3D G3DSA:1.10.1050.10 6 210 3.3E-77 T 13-10-2018 BEN78_11200 f360a9996e79d40d638fd8146978b92e 210 SMART SM00363 99 163 2.7E-17 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11200 f360a9996e79d40d638fd8146978b92e 210 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 210 35.163 T 13-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 BEN78_00990 9b198ca28c799648f5d47c4244939863 261 PIRSF PIRSF000456 2 261 9.4E-100 T 13-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 BEN78_00990 9b198ca28c799648f5d47c4244939863 261 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 6 259 1.6E-102 T 13-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 BEN78_00990 9b198ca28c799648f5d47c4244939863 261 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 3 261 44.756 T 13-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 BEN78_00990 9b198ca28c799648f5d47c4244939863 261 Gene3D G3DSA:2.160.10.10 1 187 2.1E-52 T 13-10-2018 BEN78_00990 9b198ca28c799648f5d47c4244939863 261 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 107 141 2.4E-8 T 13-10-2018 IPR001451 Hexapeptide repeat BEN78_00990 9b198ca28c799648f5d47c4244939863 261 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 34 68 6.0E-5 T 13-10-2018 IPR001451 Hexapeptide repeat BEN78_00990 9b198ca28c799648f5d47c4244939863 261 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 142 177 5.2E-4 T 13-10-2018 IPR001451 Hexapeptide repeat BEN78_00990 9b198ca28c799648f5d47c4244939863 261 SUPERFAMILY SSF51161 5 260 2.45E-73 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily BEN78_00990 9b198ca28c799648f5d47c4244939863 261 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 178 258 2.6E-23 T 13-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 BEN78_00990 9b198ca28c799648f5d47c4244939863 261 Gene3D G3DSA:1.20.1180.10 196 261 6.1E-18 T 13-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 BEN78_16780 100036dda3180652aa6b4839a05bd9b2 327 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 6 327 73.113 T 13-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BEN78_16780 100036dda3180652aa6b4839a05bd9b2 327 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 7 326 2.6E-137 T 13-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BEN78_16780 100036dda3180652aa6b4839a05bd9b2 327 Gene3D G3DSA:3.40.47.10 4 327 8.6E-137 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 BEN78_16780 100036dda3180652aa6b4839a05bd9b2 327 SUPERFAMILY SSF53901 8 327 2.65E-74 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 BEN78_16780 100036dda3180652aa6b4839a05bd9b2 327 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 111 188 2.0E-34 T 13-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BEN78_16780 100036dda3180652aa6b4839a05bd9b2 327 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 238 327 5.2E-37 T 13-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BEN78_12665 66f677d332ff057aa159e1b273df2d74 338 Gene3D G3DSA:3.40.50.720 10 312 3.3E-105 T 13-10-2018 BEN78_12665 66f677d332ff057aa159e1b273df2d74 338 SUPERFAMILY SSF52283 5 140 1.36E-33 T 13-10-2018 BEN78_12665 66f677d332ff057aa159e1b273df2d74 338 SUPERFAMILY SSF51735 104 291 9.17E-59 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_12665 66f677d332ff057aa159e1b273df2d74 338 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 152 179 - T 13-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 BEN78_12665 66f677d332ff057aa159e1b273df2d74 338 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 290 4.4E-58 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 BEN78_12665 66f677d332ff057aa159e1b273df2d74 338 Gene3D G3DSA:3.40.50.720 101 296 3.3E-105 T 13-10-2018 BEN78_12665 66f677d332ff057aa159e1b273df2d74 338 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 314 1.4E-21 T 13-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 BEN78_05690 cfe92fdfc11d8095e6d2b468e80d3cd9 591 Gene3D G3DSA:3.10.20.310 181 260 1.9E-18 T 13-10-2018 BEN78_05690 cfe92fdfc11d8095e6d2b468e80d3cd9 591 Gene3D G3DSA:3.10.20.310 93 180 2.6E-16 T 13-10-2018 BEN78_05690 cfe92fdfc11d8095e6d2b468e80d3cd9 591 Gene3D G3DSA:3.10.20.310 11 92 5.0E-9 T 13-10-2018 BEN78_05690 cfe92fdfc11d8095e6d2b468e80d3cd9 591 Pfam PF07244 Surface antigen variable number repeat 102 167 2.0E-5 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 BEN78_05690 cfe92fdfc11d8095e6d2b468e80d3cd9 591 Gene3D G3DSA:2.40.160.50 261 591 7.6E-76 T 13-10-2018 BEN78_05690 cfe92fdfc11d8095e6d2b468e80d3cd9 591 Pfam PF01103 Surface antigen 289 588 2.4E-26 T 13-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 BEN78_05690 cfe92fdfc11d8095e6d2b468e80d3cd9 591 Pfam PF17243 POTRA domain TamA domain 1 15 90 4.8E-17 T 13-10-2018 IPR035243 TamA, POTRA domain 1 BEN78_15790 5cf1068316f2bd85cbb2d4f930ea9aec 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 146 4.8E-42 T 13-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_15790 5cf1068316f2bd85cbb2d4f930ea9aec 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 24.023 T 13-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_15790 5cf1068316f2bd85cbb2d4f930ea9aec 150 Gene3D G3DSA:3.10.430.100 61 148 5.5E-22 T 13-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily BEN78_15790 5cf1068316f2bd85cbb2d4f930ea9aec 150 SUPERFAMILY SSF55653 61 147 6.93E-21 T 13-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily BEN78_15790 5cf1068316f2bd85cbb2d4f930ea9aec 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 146 2.3E-20 T 13-10-2018 IPR020069 Ribosomal protein L9, C-terminal BEN78_15790 5cf1068316f2bd85cbb2d4f930ea9aec 150 SUPERFAMILY SSF55658 1 57 8.89E-19 T 13-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal BEN78_15790 5cf1068316f2bd85cbb2d4f930ea9aec 150 Gene3D G3DSA:3.40.5.10 1 50 5.1E-23 T 13-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_15790 5cf1068316f2bd85cbb2d4f930ea9aec 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 2.2E-22 T 13-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_15790 5cf1068316f2bd85cbb2d4f930ea9aec 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 13-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_00635 714a2f99625d3e22f7ceeddf524939b8 1168 PRINTS PR00702 Acriflavin resistance protein family signature 535 558 1.5E-38 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_00635 714a2f99625d3e22f7ceeddf524939b8 1168 PRINTS PR00702 Acriflavin resistance protein family signature 510 533 1.5E-38 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_00635 714a2f99625d3e22f7ceeddf524939b8 1168 PRINTS PR00702 Acriflavin resistance protein family signature 63 81 1.5E-38 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_00635 714a2f99625d3e22f7ceeddf524939b8 1168 PRINTS PR00702 Acriflavin resistance protein family signature 457 481 1.5E-38 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_00635 714a2f99625d3e22f7ceeddf524939b8 1168 PRINTS PR00702 Acriflavin resistance protein family signature 35 59 1.5E-38 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_00635 714a2f99625d3e22f7ceeddf524939b8 1168 SUPERFAMILY SSF82693 178 396 6.28E-16 T 13-10-2018 BEN78_00635 714a2f99625d3e22f7ceeddf524939b8 1168 SUPERFAMILY SSF82693 684 782 4.71E-7 T 13-10-2018 BEN78_00635 714a2f99625d3e22f7ceeddf524939b8 1168 Gene3D G3DSA:3.30.70.1440 790 975 4.6E-139 T 13-10-2018 BEN78_00635 714a2f99625d3e22f7ceeddf524939b8 1168 Gene3D G3DSA:3.30.70.1320 342 398 2.4E-97 T 13-10-2018 BEN78_00635 714a2f99625d3e22f7ceeddf524939b8 1168 Gene3D G3DSA:3.30.70.1320 157 205 1.6E-65 T 13-10-2018 BEN78_00635 714a2f99625d3e22f7ceeddf524939b8 1168 SUPERFAMILY SSF82866 367 562 3.01E-44 T 13-10-2018 BEN78_00635 714a2f99625d3e22f7ceeddf524939b8 1168 Gene3D G3DSA:1.20.1640.10 582 602 2.4E-97 T 13-10-2018 BEN78_00635 714a2f99625d3e22f7ceeddf524939b8 1168 Gene3D G3DSA:3.30.2090.10 834 922 4.6E-139 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN78_00635 714a2f99625d3e22f7ceeddf524939b8 1168 Gene3D G3DSA:3.30.70.1430 686 789 4.6E-139 T 13-10-2018 BEN78_00635 714a2f99625d3e22f7ceeddf524939b8 1168 SUPERFAMILY SSF82714 211 279 8.5E-11 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN78_00635 714a2f99625d3e22f7ceeddf524939b8 1168 SUPERFAMILY SSF82693 66 157 1.22E-20 T 13-10-2018 BEN78_00635 714a2f99625d3e22f7ceeddf524939b8 1168 SUPERFAMILY SSF82866 919 1140 1.96E-50 T 13-10-2018 BEN78_00635 714a2f99625d3e22f7ceeddf524939b8 1168 Gene3D G3DSA:1.20.1640.10 35 64 1.6E-65 T 13-10-2018 BEN78_00635 714a2f99625d3e22f7ceeddf524939b8 1168 Gene3D G3DSA:1.20.1640.10 399 581 2.4E-97 T 13-10-2018 BEN78_00635 714a2f99625d3e22f7ceeddf524939b8 1168 Gene3D G3DSA:3.30.2090.10 206 279 1.6E-65 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN78_00635 714a2f99625d3e22f7ceeddf524939b8 1168 Gene3D G3DSA:3.30.2090.10 297 341 2.4E-97 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN78_00635 714a2f99625d3e22f7ceeddf524939b8 1168 Gene3D G3DSA:1.20.1640.10 633 1134 4.6E-139 T 13-10-2018 BEN78_00635 714a2f99625d3e22f7ceeddf524939b8 1168 Gene3D G3DSA:3.30.70.1430 65 156 1.6E-65 T 13-10-2018 BEN78_00635 714a2f99625d3e22f7ceeddf524939b8 1168 SUPERFAMILY SSF82714 833 917 2.62E-15 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN78_00635 714a2f99625d3e22f7ceeddf524939b8 1168 Pfam PF00873 AcrB/AcrD/AcrF family 636 1137 8.9E-119 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_00635 714a2f99625d3e22f7ceeddf524939b8 1168 Pfam PF00873 AcrB/AcrD/AcrF family 29 280 1.6E-59 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_00635 714a2f99625d3e22f7ceeddf524939b8 1168 Pfam PF00873 AcrB/AcrD/AcrF family 296 560 6.2E-78 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_02965 4dca7576894fbae87018fa9fd9acdf44 285 Gene3D G3DSA:1.25.40.10 40 257 5.9E-56 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_02965 4dca7576894fbae87018fa9fd9acdf44 285 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 8 250 35.153 T 13-10-2018 IPR017689 Outer membrane protein assembly factor BamD BEN78_02965 4dca7576894fbae87018fa9fd9acdf44 285 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 10 255 2.0E-77 T 13-10-2018 IPR017689 Outer membrane protein assembly factor BamD BEN78_02965 4dca7576894fbae87018fa9fd9acdf44 285 SUPERFAMILY SSF48452 42 168 1.94E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_02965 4dca7576894fbae87018fa9fd9acdf44 285 Pfam PF13525 Outer membrane lipoprotein 39 242 1.3E-59 T 13-10-2018 IPR039565 Outer membrane lipoprotein BamD-like BEN78_11905 634c5d3dd8231541d1ff6b40d11c6447 229 Pfam PF00072 Response regulator receiver domain 8 114 1.1E-17 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_11905 634c5d3dd8231541d1ff6b40d11c6447 229 SUPERFAMILY SSF52172 4 126 7.12E-27 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_11905 634c5d3dd8231541d1ff6b40d11c6447 229 Gene3D G3DSA:1.10.10.10 133 228 1.4E-15 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_11905 634c5d3dd8231541d1ff6b40d11c6447 229 SMART SM00448 3 115 4.0E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_11905 634c5d3dd8231541d1ff6b40d11c6447 229 Gene3D G3DSA:3.40.50.2300 2 126 1.7E-23 T 13-10-2018 BEN78_11905 634c5d3dd8231541d1ff6b40d11c6447 229 SMART SM00862 149 225 7.0E-11 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN78_11905 634c5d3dd8231541d1ff6b40d11c6447 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 225 1.3E-13 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN78_11905 634c5d3dd8231541d1ff6b40d11c6447 229 SUPERFAMILY SSF46894 139 225 6.8E-13 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BEN78_01370 8907ebeb134968d525470b6c1cad5346 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 247 2.5E-61 T 13-10-2018 BEN78_01370 8907ebeb134968d525470b6c1cad5346 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 6.0E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_01370 8907ebeb134968d525470b6c1cad5346 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 6.0E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_01370 8907ebeb134968d525470b6c1cad5346 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 6.0E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_01370 8907ebeb134968d525470b6c1cad5346 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 6.0E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_01370 8907ebeb134968d525470b6c1cad5346 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 6.0E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_01370 8907ebeb134968d525470b6c1cad5346 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 6.0E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_01370 8907ebeb134968d525470b6c1cad5346 251 SUPERFAMILY SSF51735 5 248 1.84E-77 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_01370 8907ebeb134968d525470b6c1cad5346 251 Gene3D G3DSA:3.40.50.720 1 250 2.5E-81 T 13-10-2018 BEN78_01370 8907ebeb134968d525470b6c1cad5346 251 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 193 0.0057 T 13-10-2018 BEN78_01370 8907ebeb134968d525470b6c1cad5346 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 3.1E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_01370 8907ebeb134968d525470b6c1cad5346 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 3.1E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_01370 8907ebeb134968d525470b6c1cad5346 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 3.1E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_11650 430e985b1a26ed9cf0d030cfd71dbb5e 462 Gene3D G3DSA:3.40.50.450 134 460 2.4E-109 T 13-10-2018 BEN78_11650 430e985b1a26ed9cf0d030cfd71dbb5e 462 Pfam PF14793 Domain of unknown function (DUF4478) 17 122 9.6E-39 T 13-10-2018 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 BEN78_11650 430e985b1a26ed9cf0d030cfd71dbb5e 462 Gene3D G3DSA:3.30.1850.10 13 132 1.3E-38 T 13-10-2018 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 BEN78_11650 430e985b1a26ed9cf0d030cfd71dbb5e 462 SUPERFAMILY SSF102405 132 338 3.05E-40 T 13-10-2018 BEN78_11650 430e985b1a26ed9cf0d030cfd71dbb5e 462 Pfam PF11892 Domain of unknown function (DUF3412) 342 460 1.9E-52 T 13-10-2018 IPR021826 Domain of unknown function DUF3412 KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 BEN78_11650 430e985b1a26ed9cf0d030cfd71dbb5e 462 Pfam PF03641 Possible lysine decarboxylase 199 338 4.1E-30 T 13-10-2018 IPR031100 LOG family BEN78_13435 92571149a6ce1c9a09d931ecbf4cb315 230 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 15 216 4.1E-43 T 13-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 BEN78_13435 92571149a6ce1c9a09d931ecbf4cb315 230 Gene3D G3DSA:3.40.50.1360 4 230 2.2E-55 T 13-10-2018 BEN78_13435 92571149a6ce1c9a09d931ecbf4cb315 230 SUPERFAMILY SSF100950 1 218 3.77E-43 T 13-10-2018 IPR037171 NagB/RpiA transferase-like BEN78_13435 92571149a6ce1c9a09d931ecbf4cb315 230 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 11 217 1.1E-39 T 13-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 BEN78_03530 4f0e2213343d7d5dcd1bf1f5a8b5054d 439 SUPERFAMILY SSF51182 13 437 1.29E-166 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily BEN78_03530 4f0e2213343d7d5dcd1bf1f5a8b5054d 439 Pfam PF04209 homogentisate 1,2-dioxygenase 14 435 4.4E-203 T 13-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 BEN78_03530 4f0e2213343d7d5dcd1bf1f5a8b5054d 439 Hamap MF_00334 Homogentisate 1,2-dioxygenase [hmgA]. 13 437 70.341 T 13-10-2018 IPR022950 Homogentisate 1,2-dioxygenase, bacterial GO:0004411|GO:0006559|GO:0006572|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5 BEN78_03530 4f0e2213343d7d5dcd1bf1f5a8b5054d 439 TIGRFAM TIGR01015 hmgA: homogentisate 1,2-dioxygenase 12 435 3.8E-200 T 13-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 BEN78_03530 4f0e2213343d7d5dcd1bf1f5a8b5054d 439 Gene3D G3DSA:2.60.120.10 271 405 1.1E-59 T 13-10-2018 IPR014710 RmlC-like jelly roll fold BEN78_02340 1a091454e9bc229a47a5deed4e17e922 753 PRINTS PR00723 Subtilisin serine protease family (S8) signature 224 237 2.5E-16 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN78_02340 1a091454e9bc229a47a5deed4e17e922 753 PRINTS PR00723 Subtilisin serine protease family (S8) signature 159 178 2.5E-16 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN78_02340 1a091454e9bc229a47a5deed4e17e922 753 PRINTS PR00723 Subtilisin serine protease family (S8) signature 402 418 2.5E-16 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN78_02340 1a091454e9bc229a47a5deed4e17e922 753 Pfam PF00082 Subtilase family 159 444 3.1E-46 T 13-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BEN78_02340 1a091454e9bc229a47a5deed4e17e922 753 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 228 238 - T 13-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site BEN78_02340 1a091454e9bc229a47a5deed4e17e922 753 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 164 174 - T 13-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site BEN78_02340 1a091454e9bc229a47a5deed4e17e922 753 Gene3D G3DSA:3.40.50.200 128 468 2.4E-100 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BEN78_02340 1a091454e9bc229a47a5deed4e17e922 753 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 403 413 - T 13-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site BEN78_02340 1a091454e9bc229a47a5deed4e17e922 753 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 519 586 2.5E-7 T 13-10-2018 BEN78_02340 1a091454e9bc229a47a5deed4e17e922 753 SUPERFAMILY SSF52743 147 464 2.23E-70 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BEN78_02340 1a091454e9bc229a47a5deed4e17e922 753 SUPERFAMILY SSF69318 469 739 1.48E-24 T 13-10-2018 BEN78_11270 f08ed221f786c5144057dd7b32e59f26 295 Pfam PF13714 Phosphoenolpyruvate phosphomutase 10 252 1.7E-49 T 13-10-2018 BEN78_11270 f08ed221f786c5144057dd7b32e59f26 295 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 7 291 9.3E-126 T 13-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 BEN78_11270 f08ed221f786c5144057dd7b32e59f26 295 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 4 292 48.866 T 13-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 BEN78_11270 f08ed221f786c5144057dd7b32e59f26 295 SUPERFAMILY SSF51621 7 290 2.33E-101 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BEN78_11270 f08ed221f786c5144057dd7b32e59f26 295 Gene3D G3DSA:3.20.20.60 4 295 4.5E-104 T 13-10-2018 BEN78_11270 f08ed221f786c5144057dd7b32e59f26 295 ProSitePatterns PS00161 Isocitrate lyase signature. 121 126 - T 13-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 BEN78_13025 0852be2950395c69decabd5e8143f310 627 SUPERFAMILY SSF47781 530 615 6.04E-20 T 13-10-2018 IPR010994 RuvA domain 2-like BEN78_13025 0852be2950395c69decabd5e8143f310 627 Hamap MF_00203 UvrABC system protein C [uvrC]. 13 613 27.034 T 13-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 BEN78_13025 0852be2950395c69decabd5e8143f310 627 Pfam PF02151 UvrB/uvrC motif 214 243 2.7E-8 T 13-10-2018 IPR001943 UVR domain GO:0005515 BEN78_13025 0852be2950395c69decabd5e8143f310 627 Pfam PF14520 Helix-hairpin-helix domain 564 613 3.7E-6 T 13-10-2018 BEN78_13025 0852be2950395c69decabd5e8143f310 627 Gene3D G3DSA:3.40.1440.10 16 111 2.5E-30 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 BEN78_13025 0852be2950395c69decabd5e8143f310 627 SUPERFAMILY SSF46600 199 251 3.4E-11 T 13-10-2018 IPR036876 UVR domain superfamily BEN78_13025 0852be2950395c69decabd5e8143f310 627 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 20 594 6.0E-173 T 13-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 BEN78_13025 0852be2950395c69decabd5e8143f310 627 SMART SM00465 26 107 2.3E-18 T 13-10-2018 IPR000305 GIY-YIG endonuclease BEN78_13025 0852be2950395c69decabd5e8143f310 627 SUPERFAMILY SSF82771 26 109 3.53E-21 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 BEN78_13025 0852be2950395c69decabd5e8143f310 627 Pfam PF01541 GIY-YIG catalytic domain 28 102 1.7E-9 T 13-10-2018 IPR000305 GIY-YIG endonuclease BEN78_13025 0852be2950395c69decabd5e8143f310 627 SMART SM00278 594 613 100.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BEN78_13025 0852be2950395c69decabd5e8143f310 627 SMART SM00278 562 581 1.2 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BEN78_13025 0852be2950395c69decabd5e8143f310 627 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 389 548 1.6E-47 T 13-10-2018 IPR001162 UvrC family homology region BEN78_13025 0852be2950395c69decabd5e8143f310 627 Gene3D G3DSA:3.30.420.340 381 558 1.1E-46 T 13-10-2018 IPR038476 UvrC homology region 2 superfamily BEN78_13025 0852be2950395c69decabd5e8143f310 627 Gene3D G3DSA:1.10.150.20 561 615 8.8E-21 T 13-10-2018 BEN78_00875 3f68cfa853d493e57c59ac6110b0c73a 666 SUPERFAMILY SSF55486 41 649 6.3E-184 T 13-10-2018 BEN78_00875 3f68cfa853d493e57c59ac6110b0c73a 666 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 236 263 2.2E-12 T 13-10-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 BEN78_00875 3f68cfa853d493e57c59ac6110b0c73a 666 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 271 292 2.2E-12 T 13-10-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 BEN78_00875 3f68cfa853d493e57c59ac6110b0c73a 666 Pfam PF01401 Angiotensin-converting enzyme 41 648 7.7E-189 T 13-10-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 BEN78_14410 8a47f9e299466ab49ce12fb1cd115ca8 105 Gene3D G3DSA:3.30.750.24 1 91 3.4E-8 T 13-10-2018 IPR036513 STAS domain superfamily BEN78_14410 8a47f9e299466ab49ce12fb1cd115ca8 105 Pfam PF13466 STAS domain 5 82 1.4E-11 T 13-10-2018 IPR002645 STAS domain BEN78_14410 8a47f9e299466ab49ce12fb1cd115ca8 105 SUPERFAMILY SSF52091 2 87 1.65E-8 T 13-10-2018 IPR036513 STAS domain superfamily BEN78_05010 c5e8558b873cfde67966651466f0fb49 402 Pfam PF13579 Glycosyl transferase 4-like domain 18 190 1.5E-25 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 BEN78_05010 c5e8558b873cfde67966651466f0fb49 402 Gene3D G3DSA:3.40.50.2000 13 209 1.1E-25 T 13-10-2018 BEN78_05010 c5e8558b873cfde67966651466f0fb49 402 SUPERFAMILY SSF53756 2 397 3.87E-51 T 13-10-2018 BEN78_05010 c5e8558b873cfde67966651466f0fb49 402 Pfam PF00534 Glycosyl transferases group 1 215 371 2.2E-10 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 BEN78_05010 c5e8558b873cfde67966651466f0fb49 402 Gene3D G3DSA:3.40.50.2000 210 384 2.9E-19 T 13-10-2018 BEN78_08325 aa52e093842fed0fdf333fd6ba0c2bec 195 SMART SM00867 17 181 1.8E-67 T 13-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like BEN78_08325 aa52e093842fed0fdf333fd6ba0c2bec 195 Gene3D G3DSA:2.40.128.110 15 182 6.5E-52 T 13-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily BEN78_08325 aa52e093842fed0fdf333fd6ba0c2bec 195 Pfam PF04264 YceI-like domain 18 180 4.2E-42 T 13-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like BEN78_08325 aa52e093842fed0fdf333fd6ba0c2bec 195 SUPERFAMILY SSF101874 15 181 5.1E-53 T 13-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily BEN78_02095 958fc652453265e4a34e79f99628d2b4 555 Pfam PF08019 Domain of unknown function (DUF1705) 57 210 1.3E-41 T 13-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 BEN78_02095 958fc652453265e4a34e79f99628d2b4 555 SUPERFAMILY SSF53649 234 498 9.72E-16 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BEN78_02095 958fc652453265e4a34e79f99628d2b4 555 Gene3D G3DSA:3.40.720.10 218 550 2.8E-81 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BEN78_02095 958fc652453265e4a34e79f99628d2b4 555 Pfam PF00884 Sulfatase 237 531 6.9E-49 T 13-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 BEN78_15560 26ba85f3d67c880b7358ad2ca952fc72 413 Pfam PF02687 FtsX-like permease family 300 406 2.0E-12 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BEN78_15560 26ba85f3d67c880b7358ad2ca952fc72 413 Pfam PF12704 MacB-like periplasmic core domain 27 239 3.2E-16 T 13-10-2018 IPR025857 MacB-like periplasmic core domain BEN78_15560 26ba85f3d67c880b7358ad2ca952fc72 413 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 413 7.6E-130 T 13-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 BEN78_07350 1788b0a20f9e068c3389535aa67b6bb2 300 Gene3D G3DSA:3.40.190.10 89 275 1.9E-35 T 13-10-2018 BEN78_07350 1788b0a20f9e068c3389535aa67b6bb2 300 Gene3D G3DSA:1.10.10.10 1 83 1.9E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_07350 1788b0a20f9e068c3389535aa67b6bb2 300 Pfam PF03466 LysR substrate binding domain 86 288 1.4E-37 T 13-10-2018 IPR005119 LysR, substrate-binding BEN78_07350 1788b0a20f9e068c3389535aa67b6bb2 300 Gene3D G3DSA:3.40.190.10 163 262 1.9E-35 T 13-10-2018 BEN78_07350 1788b0a20f9e068c3389535aa67b6bb2 300 SUPERFAMILY SSF53850 87 291 2.71E-35 T 13-10-2018 BEN78_07350 1788b0a20f9e068c3389535aa67b6bb2 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 61 1.4E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_07350 1788b0a20f9e068c3389535aa67b6bb2 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.5E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_07350 1788b0a20f9e068c3389535aa67b6bb2 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.5E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_07350 1788b0a20f9e068c3389535aa67b6bb2 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.5E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_07350 1788b0a20f9e068c3389535aa67b6bb2 300 SUPERFAMILY SSF46785 2 109 2.29E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_10350 b1b2176a7c4f7d94b746d1be3014194b 526 SUPERFAMILY SSF51905 205 512 2.78E-53 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_10350 b1b2176a7c4f7d94b746d1be3014194b 526 PIRSF PIRSF000238 1 519 4.2E-262 T 13-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 BEN78_10350 b1b2176a7c4f7d94b746d1be3014194b 526 SUPERFAMILY SSF52833 1 100 4.92E-28 T 13-10-2018 IPR036249 Thioredoxin-like superfamily BEN78_10350 b1b2176a7c4f7d94b746d1be3014194b 526 SUPERFAMILY SSF52833 104 196 7.01E-23 T 13-10-2018 IPR036249 Thioredoxin-like superfamily BEN78_10350 b1b2176a7c4f7d94b746d1be3014194b 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 442 463 1.5E-65 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN78_10350 b1b2176a7c4f7d94b746d1be3014194b 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 245 260 1.5E-65 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN78_10350 b1b2176a7c4f7d94b746d1be3014194b 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 476 494 1.5E-65 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN78_10350 b1b2176a7c4f7d94b746d1be3014194b 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 265 275 1.5E-65 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN78_10350 b1b2176a7c4f7d94b746d1be3014194b 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 314 322 1.5E-65 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN78_10350 b1b2176a7c4f7d94b746d1be3014194b 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 403 419 1.5E-65 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN78_10350 b1b2176a7c4f7d94b746d1be3014194b 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 336 348 1.5E-65 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN78_10350 b1b2176a7c4f7d94b746d1be3014194b 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 213 235 1.5E-65 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN78_10350 b1b2176a7c4f7d94b746d1be3014194b 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 351 375 1.5E-65 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN78_10350 b1b2176a7c4f7d94b746d1be3014194b 526 Gene3D G3DSA:3.50.50.60 213 506 7.3E-111 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_10350 b1b2176a7c4f7d94b746d1be3014194b 526 Gene3D G3DSA:3.50.50.60 325 448 7.3E-111 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_10350 b1b2176a7c4f7d94b746d1be3014194b 526 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 516 1.0E-236 T 13-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 BEN78_10350 b1b2176a7c4f7d94b746d1be3014194b 526 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 343 363 - T 13-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 BEN78_10350 b1b2176a7c4f7d94b746d1be3014194b 526 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 213 502 1.0E-45 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BEN78_10350 b1b2176a7c4f7d94b746d1be3014194b 526 Pfam PF13192 Thioredoxin domain 125 194 2.0E-7 T 13-10-2018 IPR012336 Thioredoxin-like fold BEN78_10350 b1b2176a7c4f7d94b746d1be3014194b 526 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 373 2.3E-40 T 13-10-2018 BEN78_10350 b1b2176a7c4f7d94b746d1be3014194b 526 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 440 456 2.3E-40 T 13-10-2018 BEN78_10350 b1b2176a7c4f7d94b746d1be3014194b 526 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 214 233 2.3E-40 T 13-10-2018 BEN78_10350 b1b2176a7c4f7d94b746d1be3014194b 526 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 313 331 2.3E-40 T 13-10-2018 BEN78_10350 b1b2176a7c4f7d94b746d1be3014194b 526 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 466 488 2.3E-40 T 13-10-2018 BEN78_10350 b1b2176a7c4f7d94b746d1be3014194b 526 Gene3D G3DSA:3.40.30.80 1 199 1.3E-58 T 13-10-2018 BEN78_06385 18bed18683c7a3376ec85a38dc2b6670 261 Gene3D G3DSA:3.20.20.70 7 261 5.5E-84 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_06385 18bed18683c7a3376ec85a38dc2b6670 261 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 261 74.576 T 13-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 BEN78_06385 18bed18683c7a3376ec85a38dc2b6670 261 SUPERFAMILY SSF63892 12 258 2.88E-72 T 13-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 BEN78_06385 18bed18683c7a3376ec85a38dc2b6670 261 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 14 254 1.2E-57 T 13-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 BEN78_06385 18bed18683c7a3376ec85a38dc2b6670 261 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 14 256 4.8E-77 T 13-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 BEN78_04935 02fc99519945fefae021e1b35373c519 305 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 13 296 28.849 T 13-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 BEN78_04935 02fc99519945fefae021e1b35373c519 305 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 19 295 1.6E-104 T 13-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 BEN78_04935 02fc99519945fefae021e1b35373c519 305 Gene3D G3DSA:1.20.120.1780 177 298 9.4E-13 T 13-10-2018 BEN78_04935 02fc99519945fefae021e1b35373c519 305 Pfam PF01040 UbiA prenyltransferase family 36 280 3.0E-59 T 13-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 BEN78_04935 02fc99519945fefae021e1b35373c519 305 Gene3D G3DSA:1.10.357.140 33 176 4.3E-38 T 13-10-2018 BEN78_04935 02fc99519945fefae021e1b35373c519 305 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 75 97 - T 13-10-2018 IPR030470 UbiA prenyltransferase conserved site BEN78_00390 2125343da261fe37e915b77a6723f1ef 335 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 4 324 1.9E-108 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 BEN78_00390 2125343da261fe37e915b77a6723f1ef 335 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 227 246 - T 13-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 BEN78_00390 2125343da261fe37e915b77a6723f1ef 335 SMART SM01329 4 331 5.0E-181 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 BEN78_00390 2125343da261fe37e915b77a6723f1ef 335 Gene3D G3DSA:3.40.718.10 1 335 1.1E-141 T 13-10-2018 BEN78_00390 2125343da261fe37e915b77a6723f1ef 335 SUPERFAMILY SSF53659 1 335 1.37E-126 T 13-10-2018 BEN78_01985 2c850154e958a09ff690d794aba2cfd8 462 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 165 185 - T 13-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 BEN78_01985 2c850154e958a09ff690d794aba2cfd8 462 Pfam PF01938 TRAM domain 392 453 4.0E-18 T 13-10-2018 IPR002792 TRAM domain BEN78_01985 2c850154e958a09ff690d794aba2cfd8 462 SMART SM00729 161 378 5.6E-58 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BEN78_01985 2c850154e958a09ff690d794aba2cfd8 462 Gene3D G3DSA:3.80.30.20 159 394 9.2E-82 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe BEN78_01985 2c850154e958a09ff690d794aba2cfd8 462 Pfam PF00919 Uncharacterized protein family UPF0004 18 118 1.5E-29 T 13-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 BEN78_01985 2c850154e958a09ff690d794aba2cfd8 462 Gene3D G3DSA:3.40.50.12160 18 152 5.0E-34 T 13-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily BEN78_01985 2c850154e958a09ff690d794aba2cfd8 462 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 18 453 1.2E-183 T 13-10-2018 BEN78_01985 2c850154e958a09ff690d794aba2cfd8 462 SUPERFAMILY SSF102114 140 385 1.96E-59 T 13-10-2018 BEN78_01985 2c850154e958a09ff690d794aba2cfd8 462 Pfam PF04055 Radical SAM superfamily 165 339 4.4E-28 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BEN78_01985 2c850154e958a09ff690d794aba2cfd8 462 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 17 454 72.52 T 13-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 BEN78_01985 2c850154e958a09ff690d794aba2cfd8 462 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 18 451 9.2E-147 T 13-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 BEN78_16685 ca9ea82bc871cbaed6d16c4fdc7f2197 560 Pfam PF00501 AMP-binding enzyme 26 458 2.1E-109 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BEN78_16685 ca9ea82bc871cbaed6d16c4fdc7f2197 560 Gene3D G3DSA:3.30.300.30 452 558 1.0E-31 T 13-10-2018 BEN78_16685 ca9ea82bc871cbaed6d16c4fdc7f2197 560 SUPERFAMILY SSF56801 14 554 2.22E-162 T 13-10-2018 BEN78_16685 ca9ea82bc871cbaed6d16c4fdc7f2197 560 Pfam PF13193 AMP-binding enzyme C-terminal domain 467 542 3.9E-18 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BEN78_16685 ca9ea82bc871cbaed6d16c4fdc7f2197 560 ProSitePatterns PS00455 Putative AMP-binding domain signature. 208 219 - T 13-10-2018 IPR020845 AMP-binding, conserved site BEN78_16685 ca9ea82bc871cbaed6d16c4fdc7f2197 560 Gene3D G3DSA:3.40.50.12780 7 449 2.3E-123 T 13-10-2018 BEN78_16600 165c3f324ace3ff363c0d6d6c2b46072 245 SUPERFAMILY SSF51366 5 244 5.26E-59 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BEN78_16600 165c3f324ace3ff363c0d6d6c2b46072 245 Gene3D G3DSA:3.20.20.70 5 245 9.6E-81 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_16600 165c3f324ace3ff363c0d6d6c2b46072 245 Pfam PF00977 Histidine biosynthesis protein 6 237 2.2E-68 T 13-10-2018 IPR006062 Histidine biosynthesis GO:0000105 BEN78_16600 165c3f324ace3ff363c0d6d6c2b46072 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 6 241 9.7E-72 T 13-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 BEN78_16600 165c3f324ace3ff363c0d6d6c2b46072 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 5 245 31.648 T 13-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 BEN78_14730 253a4f5200d037016e84584cbee68b8b 255 Gene3D G3DSA:3.40.630.70 65 235 4.4E-55 T 13-10-2018 BEN78_14730 253a4f5200d037016e84584cbee68b8b 255 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 36 210 2.6E-56 T 13-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 BEN78_14730 253a4f5200d037016e84584cbee68b8b 255 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 39 208 1.4E-66 T 13-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 BEN78_14730 253a4f5200d037016e84584cbee68b8b 255 SUPERFAMILY SSF55729 11 226 5.83E-81 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN78_14730 253a4f5200d037016e84584cbee68b8b 255 Gene3D G3DSA:2.30.210.20 5 64 2.8E-24 T 13-10-2018 BEN78_14730 253a4f5200d037016e84584cbee68b8b 255 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 255 89.228 T 13-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 BEN78_12510 104c8aa85a6fbbe7edbd577d533ec420 446 SUPERFAMILY SSF55874 298 438 3.93E-24 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_12510 104c8aa85a6fbbe7edbd577d533ec420 446 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 339 430 2.9E-11 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_12510 104c8aa85a6fbbe7edbd577d533ec420 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 385 5.1E-5 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_12510 104c8aa85a6fbbe7edbd577d533ec420 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 420 5.1E-5 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_12510 104c8aa85a6fbbe7edbd577d533ec420 446 Gene3D G3DSA:3.30.565.10 302 440 3.5E-23 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_12510 104c8aa85a6fbbe7edbd577d533ec420 446 SMART SM00387 336 441 5.5E-19 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_12510 104c8aa85a6fbbe7edbd577d533ec420 446 Gene3D G3DSA:1.10.287.130 191 301 1.0E-8 T 13-10-2018 BEN78_00610 5c2a78aaa462a4e15ac85d1734e86a7d 389 Pfam PF00144 Beta-lactamase 24 366 1.5E-33 T 13-10-2018 IPR001466 Beta-lactamase-related BEN78_00610 5c2a78aaa462a4e15ac85d1734e86a7d 389 SUPERFAMILY SSF56601 9 366 9.46E-62 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BEN78_01035 4663d326187b8f526ddc01d6ad2ccb23 299 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 218 230 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site BEN78_01035 4663d326187b8f526ddc01d6ad2ccb23 299 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 86 102 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site BEN78_01035 4663d326187b8f526ddc01d6ad2ccb23 299 Pfam PF00348 Polyprenyl synthetase 35 269 5.6E-55 T 13-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 BEN78_01035 4663d326187b8f526ddc01d6ad2ccb23 299 SUPERFAMILY SSF48576 15 288 4.14E-79 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily BEN78_01035 4663d326187b8f526ddc01d6ad2ccb23 299 Gene3D G3DSA:1.10.600.10 9 296 3.6E-87 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily BEN78_01590 31d46825e425c4a256c65418c5e88ce1 444 Gene3D G3DSA:3.20.20.150 11 444 1.9E-177 T 13-10-2018 BEN78_01590 31d46825e425c4a256c65418c5e88ce1 444 Hamap MF_00455 Xylose isomerase [xylA]. 19 442 51.188 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BEN78_01590 31d46825e425c4a256c65418c5e88ce1 444 SUPERFAMILY SSF51658 11 443 4.7E-161 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily BEN78_01590 31d46825e425c4a256c65418c5e88ce1 444 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 12 442 3.0E-202 T 13-10-2018 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BEN78_01590 31d46825e425c4a256c65418c5e88ce1 444 PRINTS PR00688 Xylose isomerase signature 214 233 5.0E-75 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BEN78_01590 31d46825e425c4a256c65418c5e88ce1 444 PRINTS PR00688 Xylose isomerase signature 307 318 5.0E-75 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BEN78_01590 31d46825e425c4a256c65418c5e88ce1 444 PRINTS PR00688 Xylose isomerase signature 163 182 5.0E-75 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BEN78_01590 31d46825e425c4a256c65418c5e88ce1 444 PRINTS PR00688 Xylose isomerase signature 278 305 5.0E-75 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BEN78_01590 31d46825e425c4a256c65418c5e88ce1 444 PRINTS PR00688 Xylose isomerase signature 140 160 5.0E-75 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BEN78_01590 31d46825e425c4a256c65418c5e88ce1 444 PRINTS PR00688 Xylose isomerase signature 99 121 5.0E-75 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BEN78_01590 31d46825e425c4a256c65418c5e88ce1 444 PRINTS PR00688 Xylose isomerase signature 236 260 5.0E-75 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BEN78_01590 31d46825e425c4a256c65418c5e88ce1 444 PRINTS PR00688 Xylose isomerase signature 187 208 5.0E-75 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BEN78_01590 31d46825e425c4a256c65418c5e88ce1 444 PRINTS PR00688 Xylose isomerase signature 339 350 5.0E-75 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BEN78_09585 2132c37f704c648af03247bdbf678f7d 427 SMART SM00865 209 327 1.1E-53 T 13-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 BEN78_09585 2132c37f704c648af03247bdbf678f7d 427 SUPERFAMILY SSF55307 206 320 3.89E-42 T 13-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 BEN78_09585 2132c37f704c648af03247bdbf678f7d 427 ProSitePatterns PS01135 FtsZ protein signature 2. 99 120 - T 13-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 BEN78_09585 2132c37f704c648af03247bdbf678f7d 427 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 16 174 1.1E-39 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BEN78_09585 2132c37f704c648af03247bdbf678f7d 427 Pfam PF12327 FtsZ family, C-terminal domain 224 318 5.4E-37 T 13-10-2018 IPR024757 Cell division protein FtsZ, C-terminal BEN78_09585 2132c37f704c648af03247bdbf678f7d 427 PRINTS PR00423 Cell division protein FtsZ signature 128 149 1.8E-51 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BEN78_09585 2132c37f704c648af03247bdbf678f7d 427 PRINTS PR00423 Cell division protein FtsZ signature 214 235 1.8E-51 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BEN78_09585 2132c37f704c648af03247bdbf678f7d 427 PRINTS PR00423 Cell division protein FtsZ signature 191 213 1.8E-51 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BEN78_09585 2132c37f704c648af03247bdbf678f7d 427 PRINTS PR00423 Cell division protein FtsZ signature 100 120 1.8E-51 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BEN78_09585 2132c37f704c648af03247bdbf678f7d 427 SUPERFAMILY SSF52490 15 210 4.58E-69 T 13-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 BEN78_09585 2132c37f704c648af03247bdbf678f7d 427 Gene3D G3DSA:3.40.50.1440 5 221 1.2E-78 T 13-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 BEN78_09585 2132c37f704c648af03247bdbf678f7d 427 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 11 324 1.0E-127 T 13-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 BEN78_09585 2132c37f704c648af03247bdbf678f7d 427 SMART SM00864 15 207 6.7E-110 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BEN78_09585 2132c37f704c648af03247bdbf678f7d 427 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 11 332 37.115 T 13-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 BEN78_09585 2132c37f704c648af03247bdbf678f7d 427 Gene3D G3DSA:3.30.1330.20 223 331 1.8E-34 T 13-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 BEN78_10205 44c42ed0f54e683ac6c4b82cd4096e7e 259 Pfam PF03741 Integral membrane protein TerC family 16 207 2.3E-47 T 13-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 BEN78_12075 06ea912014d658b904ead76776f7b8fb 172 Gene3D G3DSA:3.30.70.560 10 171 2.7E-50 T 13-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BEN78_12075 06ea912014d658b904ead76776f7b8fb 172 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 15 146 6.2E-33 T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BEN78_12075 06ea912014d658b904ead76776f7b8fb 172 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 101 112 - T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BEN78_12075 06ea912014d658b904ead76776f7b8fb 172 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 14 146 4.3E-38 T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BEN78_12075 06ea912014d658b904ead76776f7b8fb 172 SUPERFAMILY SSF55083 12 157 1.19E-47 T 13-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BEN78_02805 b5ee32bea5c33dcff169a21f37272729 243 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 6 235 3.9E-88 T 13-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_02805 b5ee32bea5c33dcff169a21f37272729 243 Gene3D G3DSA:1.10.10.200 15 78 2.2E-26 T 13-10-2018 IPR017856 Integrase-like, N-terminal BEN78_02805 b5ee32bea5c33dcff169a21f37272729 243 SUPERFAMILY SSF75625 7 236 3.27E-86 T 13-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_02805 b5ee32bea5c33dcff169a21f37272729 243 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 2 237 33.299 T 13-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_02805 b5ee32bea5c33dcff169a21f37272729 243 Pfam PF01709 Transcriptional regulator 7 235 6.8E-88 T 13-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_02805 b5ee32bea5c33dcff169a21f37272729 243 Gene3D G3DSA:3.30.70.980 127 203 6.2E-53 T 13-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_02805 b5ee32bea5c33dcff169a21f37272729 243 Gene3D G3DSA:3.30.70.980 83 234 6.2E-53 T 13-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_00735 fd533c0f96707f8b785436d31b26eeaa 187 Gene3D G3DSA:3.40.30.10 32 186 1.2E-41 T 13-10-2018 BEN78_00735 fd533c0f96707f8b785436d31b26eeaa 187 Pfam PF08534 Redoxin 47 171 4.9E-20 T 13-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 BEN78_00735 fd533c0f96707f8b785436d31b26eeaa 187 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 14 182 1.2E-55 T 13-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 BEN78_00735 fd533c0f96707f8b785436d31b26eeaa 187 SUPERFAMILY SSF52833 41 180 1.94E-34 T 13-10-2018 IPR036249 Thioredoxin-like superfamily BEN78_09730 65d44c46acccc580cfc4f7524b037e45 387 Pfam PF08442 ATP-grasp domain 2 202 1.7E-72 T 13-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BEN78_09730 65d44c46acccc580cfc4f7524b037e45 387 SUPERFAMILY SSF56059 1 238 9.19E-77 T 13-10-2018 BEN78_09730 65d44c46acccc580cfc4f7524b037e45 387 SUPERFAMILY SSF52210 239 384 7.2E-54 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BEN78_09730 65d44c46acccc580cfc4f7524b037e45 387 Gene3D G3DSA:3.30.470.20 1 234 1.6E-89 T 13-10-2018 BEN78_09730 65d44c46acccc580cfc4f7524b037e45 387 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 1.2E-159 T 13-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BEN78_09730 65d44c46acccc580cfc4f7524b037e45 387 Gene3D G3DSA:3.40.50.261 240 387 1.0E-57 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BEN78_09730 65d44c46acccc580cfc4f7524b037e45 387 Gene3D G3DSA:3.30.1490.20 21 104 1.6E-89 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BEN78_09730 65d44c46acccc580cfc4f7524b037e45 387 PIRSF PIRSF001554 1 387 3.7E-152 T 13-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BEN78_09730 65d44c46acccc580cfc4f7524b037e45 387 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 281 - T 13-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BEN78_09730 65d44c46acccc580cfc4f7524b037e45 387 Pfam PF00549 CoA-ligase 262 381 2.5E-25 T 13-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BEN78_09730 65d44c46acccc580cfc4f7524b037e45 387 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 42.676 T 13-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BEN78_07035 63d5a6ab4ead43644f94729054730aa4 654 Gene3D G3DSA:2.130.10.10 179 395 1.9E-9 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BEN78_07035 63d5a6ab4ead43644f94729054730aa4 654 SUPERFAMILY SSF82171 37 376 1.29E-24 T 13-10-2018 BEN78_07035 63d5a6ab4ead43644f94729054730aa4 654 Gene3D G3DSA:2.120.10.30 26 178 1.4E-19 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BEN78_07035 63d5a6ab4ead43644f94729054730aa4 654 SUPERFAMILY SSF53474 401 653 7.77E-66 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_07035 63d5a6ab4ead43644f94729054730aa4 654 Pfam PF07676 WD40-like Beta Propeller Repeat 91 111 0.012 T 13-10-2018 IPR011659 WD40-like Beta Propeller BEN78_07035 63d5a6ab4ead43644f94729054730aa4 654 Pfam PF00326 Prolyl oligopeptidase family 455 653 4.3E-48 T 13-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 BEN78_07035 63d5a6ab4ead43644f94729054730aa4 654 Gene3D G3DSA:3.40.50.1820 396 654 7.8E-71 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_12415 6aa880ece07cf79bbf0ec906c66a901c 351 Pfam PF00990 Diguanylate cyclase, GGDEF domain 193 347 3.4E-40 T 13-10-2018 IPR000160 GGDEF domain BEN78_12415 6aa880ece07cf79bbf0ec906c66a901c 351 SMART SM00267 180 351 1.9E-56 T 13-10-2018 IPR000160 GGDEF domain BEN78_12415 6aa880ece07cf79bbf0ec906c66a901c 351 Pfam PF05230 MASE2 domain 21 108 7.5E-30 T 13-10-2018 IPR007894 MASE2 BEN78_12415 6aa880ece07cf79bbf0ec906c66a901c 351 Gene3D G3DSA:3.30.70.270 177 351 4.0E-52 T 13-10-2018 BEN78_12415 6aa880ece07cf79bbf0ec906c66a901c 351 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 187 350 1.4E-42 T 13-10-2018 IPR000160 GGDEF domain BEN78_12415 6aa880ece07cf79bbf0ec906c66a901c 351 SUPERFAMILY SSF55073 198 350 1.18E-43 T 13-10-2018 IPR029787 Nucleotide cyclase BEN78_08365 523922bf9c90584120a155083ddbec03 220 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 12 189 2.1E-34 T 13-10-2018 BEN78_08365 523922bf9c90584120a155083ddbec03 220 SUPERFAMILY SSF53335 3 186 1.02E-40 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_08365 523922bf9c90584120a155083ddbec03 220 Gene3D G3DSA:3.40.50.150 3 209 2.3E-53 T 13-10-2018 BEN78_01870 587f4f1a8e0bbb0c4080dd59b5d4941d 211 Gene3D G3DSA:3.40.50.850 1 207 8.3E-76 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 BEN78_01870 587f4f1a8e0bbb0c4080dd59b5d4941d 211 PRINTS PR01398 Isochorismatase signature 80 99 3.4E-36 T 13-10-2018 IPR016291 Isochorismatase GO:0008908 BEN78_01870 587f4f1a8e0bbb0c4080dd59b5d4941d 211 PRINTS PR01398 Isochorismatase signature 168 186 3.4E-36 T 13-10-2018 IPR016291 Isochorismatase GO:0008908 BEN78_01870 587f4f1a8e0bbb0c4080dd59b5d4941d 211 PRINTS PR01398 Isochorismatase signature 112 134 3.4E-36 T 13-10-2018 IPR016291 Isochorismatase GO:0008908 BEN78_01870 587f4f1a8e0bbb0c4080dd59b5d4941d 211 PRINTS PR01398 Isochorismatase signature 63 80 3.4E-36 T 13-10-2018 IPR016291 Isochorismatase GO:0008908 BEN78_01870 587f4f1a8e0bbb0c4080dd59b5d4941d 211 PRINTS PR01398 Isochorismatase signature 186 203 3.4E-36 T 13-10-2018 IPR016291 Isochorismatase GO:0008908 BEN78_01870 587f4f1a8e0bbb0c4080dd59b5d4941d 211 PRINTS PR01398 Isochorismatase signature 2 14 3.4E-36 T 13-10-2018 IPR016291 Isochorismatase GO:0008908 BEN78_01870 587f4f1a8e0bbb0c4080dd59b5d4941d 211 Pfam PF00857 Isochorismatase family 32 205 1.6E-40 T 13-10-2018 IPR000868 Isochorismatase-like GO:0003824 BEN78_01870 587f4f1a8e0bbb0c4080dd59b5d4941d 211 SUPERFAMILY SSF52499 2 210 1.7E-63 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 BEN78_03230 d22f198aecb1f30ca70b01f97851292d 564 Pfam PF04073 Aminoacyl-tRNA editing domain 256 375 4.0E-28 T 13-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 BEN78_03230 d22f198aecb1f30ca70b01f97851292d 564 SUPERFAMILY SSF52954 459 563 1.96E-25 T 13-10-2018 BEN78_03230 d22f198aecb1f30ca70b01f97851292d 564 Gene3D G3DSA:3.30.930.10 11 461 4.1E-226 T 13-10-2018 BEN78_03230 d22f198aecb1f30ca70b01f97851292d 564 Gene3D G3DSA:3.90.960.10 240 386 4.1E-226 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 BEN78_03230 d22f198aecb1f30ca70b01f97851292d 564 Gene3D G3DSA:3.40.50.800 4 548 4.1E-226 T 13-10-2018 IPR036621 Anticodon-binding domain superfamily BEN78_03230 d22f198aecb1f30ca70b01f97851292d 564 Pfam PF03129 Anticodon binding domain 471 563 4.1E-15 T 13-10-2018 IPR004154 Anticodon-binding BEN78_03230 d22f198aecb1f30ca70b01f97851292d 564 SUPERFAMILY SSF55681 10 474 1.3E-99 T 13-10-2018 BEN78_03230 d22f198aecb1f30ca70b01f97851292d 564 SUPERFAMILY SSF55826 218 385 7.85E-33 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 BEN78_03230 d22f198aecb1f30ca70b01f97851292d 564 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 563 39.077 T 13-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 BEN78_03230 d22f198aecb1f30ca70b01f97851292d 564 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 1.9E-17 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 BEN78_03230 d22f198aecb1f30ca70b01f97851292d 564 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 1.9E-17 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 BEN78_03230 d22f198aecb1f30ca70b01f97851292d 564 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 1.9E-17 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 BEN78_03230 d22f198aecb1f30ca70b01f97851292d 564 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 1.9E-17 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 BEN78_03230 d22f198aecb1f30ca70b01f97851292d 564 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 558 1.6E-210 T 13-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 BEN78_03230 d22f198aecb1f30ca70b01f97851292d 564 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 455 1.3E-42 T 13-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN78_04395 65d94c51d6fd340b95001795a3c50f93 269 SUPERFAMILY SSF52540 1 254 2.48E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_04395 65d94c51d6fd340b95001795a3c50f93 269 Gene3D G3DSA:3.40.50.300 1 260 2.2E-84 T 13-10-2018 BEN78_04395 65d94c51d6fd340b95001795a3c50f93 269 Pfam PF13614 AAA domain 3 177 3.8E-66 T 13-10-2018 IPR025669 AAA domain BEN78_16710 2f9e924f6241f8384dd2d00a23d1898b 88 SUPERFAMILY SSF54909 5 86 1.61E-11 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel BEN78_16710 2f9e924f6241f8384dd2d00a23d1898b 88 Pfam PF03795 YCII-related domain 6 85 2.8E-5 T 13-10-2018 IPR005545 YCII-related BEN78_13270 b6dbe8d49d0d9ca9be8649704ce5d270 106 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 2 102 4.1E-32 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family BEN78_13270 b6dbe8d49d0d9ca9be8649704ce5d270 106 PIRSF PIRSF004555 1 106 1.3E-35 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family BEN78_13270 b6dbe8d49d0d9ca9be8649704ce5d270 106 Pfam PF02575 YbaB/EbfC DNA-binding family 9 96 5.5E-33 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family BEN78_13270 b6dbe8d49d0d9ca9be8649704ce5d270 106 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 3 95 21.959 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family BEN78_13270 b6dbe8d49d0d9ca9be8649704ce5d270 106 Gene3D G3DSA:3.30.1310.10 1 106 4.0E-42 T 13-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily BEN78_13270 b6dbe8d49d0d9ca9be8649704ce5d270 106 SUPERFAMILY SSF82607 9 100 5.36E-32 T 13-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily BEN78_12220 bcb31e2bf1f02d3fefeb9585ed20b36d 430 Pfam PF07690 Major Facilitator Superfamily 207 386 8.1E-18 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN78_12220 bcb31e2bf1f02d3fefeb9585ed20b36d 430 Gene3D G3DSA:1.20.1250.20 205 382 1.1E-22 T 13-10-2018 BEN78_12220 bcb31e2bf1f02d3fefeb9585ed20b36d 430 SUPERFAMILY SSF103473 6 379 2.09E-46 T 13-10-2018 IPR036259 MFS transporter superfamily BEN78_12220 bcb31e2bf1f02d3fefeb9585ed20b36d 430 Gene3D G3DSA:1.20.1250.20 6 193 1.2E-13 T 13-10-2018 BEN78_10615 c0cca52a91a0864ed0f01507f6b69c18 136 SUPERFAMILY SSF88723 1 131 1.85E-25 T 13-10-2018 IPR029060 PIN-like domain superfamily BEN78_10615 c0cca52a91a0864ed0f01507f6b69c18 136 Gene3D G3DSA:3.40.50.1010 1 133 6.0E-34 T 13-10-2018 BEN78_10615 c0cca52a91a0864ed0f01507f6b69c18 136 Pfam PF01850 PIN domain 3 117 4.3E-11 T 13-10-2018 IPR002716 PIN domain BEN78_08555 2090b5f73bfaac1f87519d89029ee7b7 248 SUPERFAMILY SSF46689 129 176 4.12E-6 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN78_08555 2090b5f73bfaac1f87519d89029ee7b7 248 Pfam PF12833 Helix-turn-helix domain 151 229 8.8E-17 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BEN78_08555 2090b5f73bfaac1f87519d89029ee7b7 248 SMART SM00342 145 228 1.1E-13 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BEN78_08555 2090b5f73bfaac1f87519d89029ee7b7 248 SUPERFAMILY SSF46689 181 229 2.42E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN78_08555 2090b5f73bfaac1f87519d89029ee7b7 248 Gene3D G3DSA:1.10.10.60 129 235 1.6E-21 T 13-10-2018 BEN78_01060 3b5ac2f867f5bfecb4a850e2123dd38e 177 SUPERFAMILY SSF158710 26 169 2.09E-44 T 13-10-2018 IPR023153 PSPTO4464-like domain superfamily BEN78_01060 3b5ac2f867f5bfecb4a850e2123dd38e 177 Pfam PF04751 Protein of unknown function (DUF615) 14 167 1.1E-46 T 13-10-2018 IPR006839 Ribosome-associated, YjgA BEN78_01060 3b5ac2f867f5bfecb4a850e2123dd38e 177 Gene3D G3DSA:1.10.60.30 102 175 1.2E-27 T 13-10-2018 BEN78_01060 3b5ac2f867f5bfecb4a850e2123dd38e 177 Gene3D G3DSA:1.10.60.30 23 97 7.6E-20 T 13-10-2018 BEN78_01060 3b5ac2f867f5bfecb4a850e2123dd38e 177 PIRSF PIRSF016183 1 175 1.8E-59 T 13-10-2018 IPR006839 Ribosome-associated, YjgA BEN78_01060 3b5ac2f867f5bfecb4a850e2123dd38e 177 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 3 171 21.662 T 13-10-2018 IPR006839 Ribosome-associated, YjgA BEN78_02515 65e2738b5eac24c835deee5e9d71cff9 319 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 303 4.0E-131 T 13-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 BEN78_02515 65e2738b5eac24c835deee5e9d71cff9 319 Gene3D G3DSA:3.40.50.1100 37 155 2.6E-116 T 13-10-2018 BEN78_02515 65e2738b5eac24c835deee5e9d71cff9 319 SUPERFAMILY SSF53686 2 305 1.31E-95 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BEN78_02515 65e2738b5eac24c835deee5e9d71cff9 319 Gene3D G3DSA:3.40.50.1100 7 300 2.6E-116 T 13-10-2018 BEN78_02515 65e2738b5eac24c835deee5e9d71cff9 319 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 303 1.9E-124 T 13-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 BEN78_02515 65e2738b5eac24c835deee5e9d71cff9 319 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 13-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 BEN78_02515 65e2738b5eac24c835deee5e9d71cff9 319 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 292 2.2E-65 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BEN78_05610 40cc0c706931050e4dab06120ab2d85d 530 SUPERFAMILY SSF52540 12 211 1.2E-28 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_05610 40cc0c706931050e4dab06120ab2d85d 530 Pfam PF00005 ABC transporter 30 164 2.1E-14 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_05610 40cc0c706931050e4dab06120ab2d85d 530 Gene3D G3DSA:3.40.50.300 350 520 2.3E-32 T 13-10-2018 BEN78_05610 40cc0c706931050e4dab06120ab2d85d 530 Gene3D G3DSA:3.40.50.300 1 268 4.0E-35 T 13-10-2018 BEN78_05610 40cc0c706931050e4dab06120ab2d85d 530 SUPERFAMILY SSF52540 360 509 7.08E-30 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_05610 40cc0c706931050e4dab06120ab2d85d 530 Pfam PF00005 ABC transporter 360 477 2.0E-14 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_05610 40cc0c706931050e4dab06120ab2d85d 530 SMART SM00382 357 522 1.7E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_05610 40cc0c706931050e4dab06120ab2d85d 530 SMART SM00382 25 217 1.9E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_09330 12dab1f81316c367d6a26850fd3d5abf 208 Pfam PF10001 Uncharacterized protein conserved in bacteria (DUF2242) 56 173 3.8E-44 T 13-10-2018 IPR018718 Protein of unknown function DUF2242 BEN78_16665 f615e69fee69972807a6cdd3c6d407ce 572 Gene3D G3DSA:3.40.50.300 345 559 1.1E-57 T 13-10-2018 BEN78_16665 f615e69fee69972807a6cdd3c6d407ce 572 Pfam PF00664 ABC transporter transmembrane region 69 281 1.6E-21 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BEN78_16665 f615e69fee69972807a6cdd3c6d407ce 572 SUPERFAMILY SSF90123 20 345 2.75E-40 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BEN78_16665 f615e69fee69972807a6cdd3c6d407ce 572 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN78_16665 f615e69fee69972807a6cdd3c6d407ce 572 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 33 556 2.9E-147 T 13-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 BEN78_16665 f615e69fee69972807a6cdd3c6d407ce 572 Pfam PF00005 ABC transporter 379 514 1.0E-21 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_16665 f615e69fee69972807a6cdd3c6d407ce 572 Gene3D G3DSA:1.20.1560.10 8 338 2.9E-35 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BEN78_16665 f615e69fee69972807a6cdd3c6d407ce 572 SMART SM00382 385 560 1.9E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_16665 f615e69fee69972807a6cdd3c6d407ce 572 SUPERFAMILY SSF52540 356 557 2.11E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_09385 7bb0a18229b90c1cef3e4cee548cc2b6 283 PIRSF PIRSF002786 1 279 1.2E-36 T 13-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 BEN78_09385 7bb0a18229b90c1cef3e4cee548cc2b6 283 SUPERFAMILY SSF158544 95 191 1.05E-22 T 13-10-2018 IPR038072 GspK, central domain superfamily BEN78_09385 7bb0a18229b90c1cef3e4cee548cc2b6 283 Gene3D G3DSA:1.10.40.60 91 193 4.2E-16 T 13-10-2018 IPR038072 GspK, central domain superfamily BEN78_09385 7bb0a18229b90c1cef3e4cee548cc2b6 283 Pfam PF03934 Type II secretion system (T2SS), protein K 29 261 1.2E-32 T 13-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 BEN78_03545 5b0c102b11abc4d1f69c5758dcce3c47 507 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 26 503 3.2E-107 T 13-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 BEN78_03545 5b0c102b11abc4d1f69c5758dcce3c47 507 Gene3D G3DSA:1.20.1250.20 20 507 3.4E-119 T 13-10-2018 BEN78_03545 5b0c102b11abc4d1f69c5758dcce3c47 507 Pfam PF00854 POT family 103 464 1.0E-59 T 13-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 BEN78_03545 5b0c102b11abc4d1f69c5758dcce3c47 507 SUPERFAMILY SSF103473 19 220 2.49E-22 T 13-10-2018 IPR036259 MFS transporter superfamily BEN78_03545 5b0c102b11abc4d1f69c5758dcce3c47 507 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 164 176 - T 13-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 BEN78_03545 5b0c102b11abc4d1f69c5758dcce3c47 507 SUPERFAMILY SSF103473 236 503 2.35E-13 T 13-10-2018 IPR036259 MFS transporter superfamily BEN78_10400 bef308c2ba6c09770de4dcf33e84bc19 150 Pfam PF11304 Protein of unknown function (DUF3106) 34 133 2.3E-25 T 13-10-2018 IPR021455 Protein of unknown function DUF3106 BEN78_01490 b72ae48f593c32c7bbc66be65bcb2a8d 295 Pfam PF12833 Helix-turn-helix domain 208 281 7.6E-14 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BEN78_01490 b72ae48f593c32c7bbc66be65bcb2a8d 295 SUPERFAMILY SSF46689 186 236 1.43E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN78_01490 b72ae48f593c32c7bbc66be65bcb2a8d 295 SUPERFAMILY SSF46689 238 283 9.86E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN78_01490 b72ae48f593c32c7bbc66be65bcb2a8d 295 SMART SM00342 202 285 3.3E-10 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BEN78_01490 b72ae48f593c32c7bbc66be65bcb2a8d 295 Pfam PF06719 AraC-type transcriptional regulator N-terminus 25 173 2.4E-38 T 13-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal BEN78_01490 b72ae48f593c32c7bbc66be65bcb2a8d 295 Gene3D G3DSA:1.10.10.60 185 290 6.4E-20 T 13-10-2018 BEN78_12030 032c149c2c59afe69a99c1f6f8c03984 83 SUPERFAMILY SSF47413 4 68 4.22E-10 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN78_12030 032c149c2c59afe69a99c1f6f8c03984 83 SMART SM00530 6 63 1.3E-6 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN78_12030 032c149c2c59afe69a99c1f6f8c03984 83 Pfam PF13560 Helix-turn-helix domain 5 62 8.1E-10 T 13-10-2018 BEN78_12030 032c149c2c59afe69a99c1f6f8c03984 83 Gene3D G3DSA:1.10.260.40 1 80 2.1E-20 T 13-10-2018 BEN78_04090 bbad43552b8f38a29516f412a94d0ca6 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 6.3E-25 T 13-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 BEN78_04090 bbad43552b8f38a29516f412a94d0ca6 156 SUPERFAMILY SSF81573 62 121 1.7E-9 T 13-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily BEN78_04090 bbad43552b8f38a29516f412a94d0ca6 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 155 2.2E-37 T 13-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 BEN78_04090 bbad43552b8f38a29516f412a94d0ca6 156 Gene3D G3DSA:1.20.5.620 62 122 4.7E-10 T 13-10-2018 BEN78_04090 bbad43552b8f38a29516f412a94d0ca6 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 11.757 T 13-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 BEN78_07170 0c3902d57bdbc846b646b8c59edb2923 299 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 13 269 9.5E-61 T 13-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 BEN78_07170 0c3902d57bdbc846b646b8c59edb2923 299 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 5 270 28.004 T 13-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 BEN78_07170 0c3902d57bdbc846b646b8c59edb2923 299 SUPERFAMILY SSF53335 10 227 3.41E-36 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_07170 0c3902d57bdbc846b646b8c59edb2923 299 Pfam PF08241 Methyltransferase domain 51 153 8.4E-18 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 BEN78_07170 0c3902d57bdbc846b646b8c59edb2923 299 Gene3D G3DSA:3.40.50.150 3 273 2.2E-31 T 13-10-2018 BEN78_16530 e21ad18e9933238f338bae2cae49daf8 1640 Pfam PF12466 Glutamate dehydrogenase N terminal 11 73 9.7E-17 T 13-10-2018 IPR024727 Bacterial NAD-glutamate dehydrogenase, N-terminal BEN78_16530 e21ad18e9933238f338bae2cae49daf8 1640 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 77 1634 0.0 T 13-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 BEN78_16530 e21ad18e9933238f338bae2cae49daf8 1640 PIRSF PIRSF036761 16 1640 0.0 T 13-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 BEN78_16530 e21ad18e9933238f338bae2cae49daf8 1640 SUPERFAMILY SSF51735 979 1269 2.82E-30 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_16530 e21ad18e9933238f338bae2cae49daf8 1640 SUPERFAMILY SSF53223 789 975 6.23E-21 T 13-10-2018 BEN78_12140 f28fbb527e6c66ed463f00258ef84cb9 568 SUPERFAMILY SSF56235 1 204 2.23E-54 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BEN78_12140 f28fbb527e6c66ed463f00258ef84cb9 568 Gene3D G3DSA:3.60.20.10 2 201 4.1E-62 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BEN78_12140 f28fbb527e6c66ed463f00258ef84cb9 568 PIRSF PIRSF001589 370 529 1.6E-30 T 13-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 BEN78_12140 f28fbb527e6c66ed463f00258ef84cb9 568 PIRSF PIRSF001589 1 375 3.5E-104 T 13-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 BEN78_12140 f28fbb527e6c66ed463f00258ef84cb9 568 SUPERFAMILY SSF52402 217 492 5.86E-73 T 13-10-2018 BEN78_12140 f28fbb527e6c66ed463f00258ef84cb9 568 Gene3D G3DSA:3.40.50.620 204 527 3.3E-104 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_12140 f28fbb527e6c66ed463f00258ef84cb9 568 Pfam PF13537 Glutamine amidotransferase domain 50 174 3.6E-38 T 13-10-2018 IPR017932 Glutamine amidotransferase type 2 domain BEN78_12140 f28fbb527e6c66ed463f00258ef84cb9 568 Pfam PF00733 Asparagine synthase 220 375 2.9E-56 T 13-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 BEN78_12140 f28fbb527e6c66ed463f00258ef84cb9 568 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 379 1.2E-102 T 13-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 BEN78_01780 4da90d306aa25466748efe2372909d21 350 SMART SM00354 6 76 9.4E-15 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN78_01780 4da90d306aa25466748efe2372909d21 350 Gene3D G3DSA:3.40.50.2300 60 317 5.9E-64 T 13-10-2018 BEN78_01780 4da90d306aa25466748efe2372909d21 350 Gene3D G3DSA:3.40.50.2300 170 300 5.9E-64 T 13-10-2018 BEN78_01780 4da90d306aa25466748efe2372909d21 350 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 51 7.7E-16 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN78_01780 4da90d306aa25466748efe2372909d21 350 SUPERFAMILY SSF47413 6 64 3.1E-16 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN78_01780 4da90d306aa25466748efe2372909d21 350 Gene3D G3DSA:1.10.260.40 1 59 1.1E-19 T 13-10-2018 BEN78_01780 4da90d306aa25466748efe2372909d21 350 SUPERFAMILY SSF53822 64 327 1.85E-57 T 13-10-2018 IPR028082 Periplasmic binding protein-like I BEN78_01780 4da90d306aa25466748efe2372909d21 350 Pfam PF13377 Periplasmic binding protein-like domain 178 338 5.8E-36 T 13-10-2018 BEN78_13680 088b6c91faa3a27be76e136bbd285962 309 Pfam PF08241 Methyltransferase domain 152 245 1.3E-23 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 BEN78_13680 088b6c91faa3a27be76e136bbd285962 309 SUPERFAMILY SSF46785 1 84 2.87E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_13680 088b6c91faa3a27be76e136bbd285962 309 SUPERFAMILY SSF53335 126 308 3.04E-37 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_13680 088b6c91faa3a27be76e136bbd285962 309 Gene3D G3DSA:3.40.50.150 105 303 3.8E-35 T 13-10-2018 BEN78_13680 088b6c91faa3a27be76e136bbd285962 309 Gene3D G3DSA:1.10.10.10 1 94 5.0E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_13680 088b6c91faa3a27be76e136bbd285962 309 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 29 40 2.1E-14 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BEN78_13680 088b6c91faa3a27be76e136bbd285962 309 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 2.1E-14 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BEN78_13680 088b6c91faa3a27be76e136bbd285962 309 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 42 57 2.1E-14 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BEN78_13680 088b6c91faa3a27be76e136bbd285962 309 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 2.1E-14 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BEN78_13680 088b6c91faa3a27be76e136bbd285962 309 Pfam PF01022 Bacterial regulatory protein, arsR family 15 60 3.2E-14 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BEN78_13680 088b6c91faa3a27be76e136bbd285962 309 SMART SM00418 8 89 9.3E-21 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BEN78_00915 fe2cfd2f3def55f830520e709dcf7b94 509 Gene3D G3DSA:3.50.50.60 31 374 7.9E-52 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_00915 fe2cfd2f3def55f830520e709dcf7b94 509 Gene3D G3DSA:2.102.10.10 389 508 1.0E-22 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BEN78_00915 fe2cfd2f3def55f830520e709dcf7b94 509 Gene3D G3DSA:3.30.9.10 123 333 7.9E-52 T 13-10-2018 BEN78_00915 fe2cfd2f3def55f830520e709dcf7b94 509 SUPERFAMILY SSF51971 30 380 4.36E-32 T 13-10-2018 BEN78_00915 fe2cfd2f3def55f830520e709dcf7b94 509 Pfam PF00355 Rieske [2Fe-2S] domain 421 498 1.5E-11 T 13-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 BEN78_00915 fe2cfd2f3def55f830520e709dcf7b94 509 Pfam PF01266 FAD dependent oxidoreductase 31 373 5.5E-45 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 BEN78_00915 fe2cfd2f3def55f830520e709dcf7b94 509 SUPERFAMILY SSF50022 413 499 3.8E-22 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BEN78_00915 fe2cfd2f3def55f830520e709dcf7b94 509 PRINTS PR00162 Rieske 2Fe-2S subunit signature 472 484 4.2E-6 T 13-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 BEN78_00915 fe2cfd2f3def55f830520e709dcf7b94 509 PRINTS PR00162 Rieske 2Fe-2S subunit signature 485 497 4.2E-6 T 13-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 BEN78_00915 fe2cfd2f3def55f830520e709dcf7b94 509 PRINTS PR00162 Rieske 2Fe-2S subunit signature 451 462 4.2E-6 T 13-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 BEN78_04445 cb555030dee70137a02b1cfcad005d52 743 Gene3D G3DSA:2.40.170.20 198 743 5.3E-92 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_04445 cb555030dee70137a02b1cfcad005d52 743 Pfam PF00593 TonB dependent receptor 310 741 1.3E-39 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_04445 cb555030dee70137a02b1cfcad005d52 743 Pfam PF07715 TonB-dependent Receptor Plug Domain 79 180 5.4E-22 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_04445 cb555030dee70137a02b1cfcad005d52 743 SUPERFAMILY SSF56935 48 743 2.62E-115 T 13-10-2018 BEN78_04445 cb555030dee70137a02b1cfcad005d52 743 Gene3D G3DSA:2.170.130.10 59 191 2.7E-32 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_04445 cb555030dee70137a02b1cfcad005d52 743 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 81 743 9.8E-78 T 13-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 BEN78_13310 30a6094f551f226d5b1fe913c97931f1 267 Pfam PF00795 Carbon-nitrogen hydrolase 5 243 2.4E-29 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 BEN78_13310 30a6094f551f226d5b1fe913c97931f1 267 SUPERFAMILY SSF56317 1 255 9.68E-58 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily BEN78_13310 30a6094f551f226d5b1fe913c97931f1 267 Gene3D G3DSA:3.60.110.10 1 266 1.2E-95 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily BEN78_06620 849550234a3fe6babca8bcfdb6333c59 448 Pfam PF01769 Divalent cation transporter 306 436 5.0E-28 T 13-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 BEN78_06620 849550234a3fe6babca8bcfdb6333c59 448 SUPERFAMILY SSF158791 12 115 8.11E-16 T 13-10-2018 BEN78_06620 849550234a3fe6babca8bcfdb6333c59 448 Gene3D G3DSA:3.10.580.10 115 243 7.3E-37 T 13-10-2018 BEN78_06620 849550234a3fe6babca8bcfdb6333c59 448 TIGRFAM TIGR00400 mgtE: magnesium transporter 14 444 9.1E-99 T 13-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 BEN78_06620 849550234a3fe6babca8bcfdb6333c59 448 Gene3D G3DSA:1.10.357.20 258 443 2.5E-55 T 13-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain BEN78_06620 849550234a3fe6babca8bcfdb6333c59 448 Pfam PF00571 CBS domain 118 178 8.0E-4 T 13-10-2018 IPR000644 CBS domain BEN78_06620 849550234a3fe6babca8bcfdb6333c59 448 Pfam PF00571 CBS domain 189 238 7.4E-8 T 13-10-2018 IPR000644 CBS domain BEN78_06620 849550234a3fe6babca8bcfdb6333c59 448 SUPERFAMILY SSF54631 118 259 2.62E-27 T 13-10-2018 BEN78_06620 849550234a3fe6babca8bcfdb6333c59 448 SMART SM00116 125 179 18.0 T 13-10-2018 IPR000644 CBS domain BEN78_06620 849550234a3fe6babca8bcfdb6333c59 448 SMART SM00116 191 239 7.8E-9 T 13-10-2018 IPR000644 CBS domain BEN78_06620 849550234a3fe6babca8bcfdb6333c59 448 Pfam PF03448 MgtE intracellular N domain 17 115 5.8E-19 T 13-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain BEN78_06620 849550234a3fe6babca8bcfdb6333c59 448 SUPERFAMILY SSF161093 266 443 4.45E-45 T 13-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 BEN78_06620 849550234a3fe6babca8bcfdb6333c59 448 Gene3D G3DSA:1.25.60.10 7 113 2.1E-10 T 13-10-2018 IPR038076 MgtE, N-terminal domain superfamily BEN78_06620 849550234a3fe6babca8bcfdb6333c59 448 SMART SM00924 15 118 6.1E-18 T 13-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain BEN78_02870 40d1e35c61e7899daa14709d1cf0c6ba 302 Pfam PF13354 Beta-lactamase enzyme family 69 266 5.8E-39 T 13-10-2018 BEN78_02870 40d1e35c61e7899daa14709d1cf0c6ba 302 Gene3D G3DSA:3.40.710.10 41 301 2.0E-69 T 13-10-2018 BEN78_02870 40d1e35c61e7899daa14709d1cf0c6ba 302 PRINTS PR00118 Beta-lactamase class A signature 179 204 1.5E-51 T 13-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 BEN78_02870 40d1e35c61e7899daa14709d1cf0c6ba 302 PRINTS PR00118 Beta-lactamase class A signature 75 92 1.5E-51 T 13-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 BEN78_02870 40d1e35c61e7899daa14709d1cf0c6ba 302 PRINTS PR00118 Beta-lactamase class A signature 117 142 1.5E-51 T 13-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 BEN78_02870 40d1e35c61e7899daa14709d1cf0c6ba 302 PRINTS PR00118 Beta-lactamase class A signature 43 67 1.5E-51 T 13-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 BEN78_02870 40d1e35c61e7899daa14709d1cf0c6ba 302 PRINTS PR00118 Beta-lactamase class A signature 153 177 1.5E-51 T 13-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 BEN78_02870 40d1e35c61e7899daa14709d1cf0c6ba 302 PRINTS PR00118 Beta-lactamase class A signature 215 230 1.5E-51 T 13-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 BEN78_02870 40d1e35c61e7899daa14709d1cf0c6ba 302 PRINTS PR00118 Beta-lactamase class A signature 232 247 1.5E-51 T 13-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 BEN78_02870 40d1e35c61e7899daa14709d1cf0c6ba 302 SUPERFAMILY SSF56601 43 287 9.63E-64 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BEN78_06925 8549f5bd165164c9a61dcd1032057602 224 Gene3D G3DSA:3.40.140.10 101 224 1.2E-36 T 13-10-2018 BEN78_06925 8549f5bd165164c9a61dcd1032057602 224 SUPERFAMILY SSF47781 17 89 1.96E-7 T 13-10-2018 IPR010994 RuvA domain 2-like BEN78_06925 8549f5bd165164c9a61dcd1032057602 224 Pfam PF04002 RadC-like JAB domain 103 221 2.0E-38 T 13-10-2018 IPR025657 RadC-like JAB domain BEN78_06925 8549f5bd165164c9a61dcd1032057602 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 13-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site BEN78_06925 8549f5bd165164c9a61dcd1032057602 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 5.7E-63 T 13-10-2018 IPR001405 Uncharacterised protein family UPF0758 BEN78_11205 4ab7cd27a4a5581b27b5b7f4eb7eb857 332 SMART SM00662 23 233 2.5E-105 T 13-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN78_11205 4ab7cd27a4a5581b27b5b7f4eb7eb857 332 SUPERFAMILY SSF55257 10 232 1.18E-30 T 13-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN78_11205 4ab7cd27a4a5581b27b5b7f4eb7eb857 332 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 316 34.617 T 13-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN78_11205 4ab7cd27a4a5581b27b5b7f4eb7eb857 332 SUPERFAMILY SSF47789 250 322 1.7E-25 T 13-10-2018 BEN78_11205 4ab7cd27a4a5581b27b5b7f4eb7eb857 332 Gene3D G3DSA:1.10.150.20 244 328 2.1E-36 T 13-10-2018 BEN78_11205 4ab7cd27a4a5581b27b5b7f4eb7eb857 332 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 251 307 1.3E-23 T 13-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN78_11205 4ab7cd27a4a5581b27b5b7f4eb7eb857 332 SUPERFAMILY SSF56553 53 177 7.85E-42 T 13-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN78_11205 4ab7cd27a4a5581b27b5b7f4eb7eb857 332 Gene3D G3DSA:3.30.1360.10 19 227 1.1E-82 T 13-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN78_11205 4ab7cd27a4a5581b27b5b7f4eb7eb857 332 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 154 1.2E-24 T 13-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN78_11205 4ab7cd27a4a5581b27b5b7f4eb7eb857 332 Gene3D G3DSA:2.170.120.12 53 176 1.1E-82 T 13-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN78_11205 4ab7cd27a4a5581b27b5b7f4eb7eb857 332 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 255 326 7.0E-35 T 13-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN78_11205 4ab7cd27a4a5581b27b5b7f4eb7eb857 332 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 315 5.3E-110 T 13-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN78_11205 4ab7cd27a4a5581b27b5b7f4eb7eb857 332 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 227 1.1E-24 T 13-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN78_10215 be4bfd350591703bdf8a8d22ace673dc 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 85 264 6.4E-96 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BEN78_10215 be4bfd350591703bdf8a8d22ace673dc 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 84 5.7E-42 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BEN78_10215 be4bfd350591703bdf8a8d22ace673dc 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 1.7E-48 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BEN78_10215 be4bfd350591703bdf8a8d22ace673dc 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 1.7E-48 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BEN78_10215 be4bfd350591703bdf8a8d22ace673dc 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 1.7E-48 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BEN78_10215 be4bfd350591703bdf8a8d22ace673dc 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 1.7E-48 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BEN78_10215 be4bfd350591703bdf8a8d22ace673dc 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 1.7E-48 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BEN78_10215 be4bfd350591703bdf8a8d22ace673dc 264 Gene3D G3DSA:3.30.572.10 1 264 1.5E-126 T 13-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BEN78_10215 be4bfd350591703bdf8a8d22ace673dc 264 SUPERFAMILY SSF55831 1 264 1.96E-125 T 13-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BEN78_10215 be4bfd350591703bdf8a8d22ace673dc 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 39.888 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BEN78_10215 be4bfd350591703bdf8a8d22ace673dc 264 Pfam PF00303 Thymidylate synthase 3 264 4.4E-120 T 13-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BEN78_10215 be4bfd350591703bdf8a8d22ace673dc 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 13-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BEN78_00500 f3d47d66b9065c32da5d93a345a7fc58 277 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 5 70 7.9E-23 T 13-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 BEN78_00500 f3d47d66b9065c32da5d93a345a7fc58 277 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 274 54.337 T 13-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 BEN78_00500 f3d47d66b9065c32da5d93a345a7fc58 277 SUPERFAMILY SSF51161 4 258 8.87E-72 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily BEN78_00500 f3d47d66b9065c32da5d93a345a7fc58 277 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 177 211 1.2E-10 T 13-10-2018 IPR001451 Hexapeptide repeat BEN78_00500 f3d47d66b9065c32da5d93a345a7fc58 277 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 5 274 7.7E-130 T 13-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 BEN78_00500 f3d47d66b9065c32da5d93a345a7fc58 277 Gene3D G3DSA:2.160.10.10 89 259 1.7E-56 T 13-10-2018 BEN78_00500 f3d47d66b9065c32da5d93a345a7fc58 277 Gene3D G3DSA:1.10.166.10 2 72 5.8E-25 T 13-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 BEN78_00500 f3d47d66b9065c32da5d93a345a7fc58 277 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 134 168 1.2E-4 T 13-10-2018 IPR001451 Hexapeptide repeat BEN78_09180 88620f4ad3dd06f8f4f7264eabc41321 194 SUPERFAMILY SSF52833 47 190 2.78E-29 T 13-10-2018 IPR036249 Thioredoxin-like superfamily BEN78_09180 88620f4ad3dd06f8f4f7264eabc41321 194 Gene3D G3DSA:3.40.30.10 31 190 9.3E-33 T 13-10-2018 BEN78_09180 88620f4ad3dd06f8f4f7264eabc41321 194 Pfam PF08534 Redoxin 58 186 5.8E-21 T 13-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 BEN78_12120 595f8f09e50bb135b33aeb3f91eade34 632 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 115 5.9E-9 T 13-10-2018 BEN78_12120 595f8f09e50bb135b33aeb3f91eade34 632 SMART SM01340 210 328 4.1E-56 T 13-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 BEN78_12120 595f8f09e50bb135b33aeb3f91eade34 632 Pfam PF08676 MutL C terminal dimerisation domain 441 588 8.2E-48 T 13-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 BEN78_12120 595f8f09e50bb135b33aeb3f91eade34 632 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 2 308 5.4E-96 T 13-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 BEN78_12120 595f8f09e50bb135b33aeb3f91eade34 632 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 212 327 2.9E-38 T 13-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 BEN78_12120 595f8f09e50bb135b33aeb3f91eade34 632 Gene3D G3DSA:3.30.1370.100 488 583 1.9E-57 T 13-10-2018 BEN78_12120 595f8f09e50bb135b33aeb3f91eade34 632 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 628 28.713 T 13-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 BEN78_12120 595f8f09e50bb135b33aeb3f91eade34 632 SMART SM00853 445 588 2.8E-54 T 13-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 BEN78_12120 595f8f09e50bb135b33aeb3f91eade34 632 SUPERFAMILY SSF54211 190 328 2.96E-36 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BEN78_12120 595f8f09e50bb135b33aeb3f91eade34 632 Gene3D G3DSA:2.30.42.20 447 625 1.9E-57 T 13-10-2018 BEN78_12120 595f8f09e50bb135b33aeb3f91eade34 632 Gene3D G3DSA:3.30.230.10 215 327 7.4E-38 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BEN78_12120 595f8f09e50bb135b33aeb3f91eade34 632 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 13-10-2018 IPR014762 DNA mismatch repair, conserved site BEN78_12120 595f8f09e50bb135b33aeb3f91eade34 632 SUPERFAMILY SSF55874 2 205 1.44E-53 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_12120 595f8f09e50bb135b33aeb3f91eade34 632 Gene3D G3DSA:3.30.565.10 1 206 9.9E-65 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_12120 595f8f09e50bb135b33aeb3f91eade34 632 SUPERFAMILY SSF118116 441 630 7.32E-60 T 13-10-2018 IPR037198 MutL, C-terminal domain superfamily BEN78_03780 f83f486c76e5376b0cf2cb1ea9fe85a2 734 Pfam PF12805 FUSC-like inner membrane protein yccS 70 356 2.9E-95 T 13-10-2018 IPR032692 Integral membrane protein YccS, N-terminal BEN78_03780 f83f486c76e5376b0cf2cb1ea9fe85a2 734 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 12 716 4.1E-190 T 13-10-2018 IPR010019 Integral membrane protein, YccS BEN78_03780 f83f486c76e5376b0cf2cb1ea9fe85a2 734 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 11 718 2.6E-204 T 13-10-2018 IPR010020 Integral membrane protein, YccS/YhfK BEN78_03780 f83f486c76e5376b0cf2cb1ea9fe85a2 734 Pfam PF13515 Fusaric acid resistance protein-like 414 533 2.0E-18 T 13-10-2018 BEN78_10645 f4cf1f6509ed1684f01ec27e270d8d3b 1183 Gene3D G3DSA:2.130.10.10 28 294 6.1E-35 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BEN78_10645 f4cf1f6509ed1684f01ec27e270d8d3b 1183 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 920 1031 7.5E-26 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_10645 f4cf1f6509ed1684f01ec27e270d8d3b 1183 SUPERFAMILY SSF63829 258 457 2.29E-8 T 13-10-2018 BEN78_10645 f4cf1f6509ed1684f01ec27e270d8d3b 1183 SMART SM00387 920 1032 1.2E-37 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_10645 f4cf1f6509ed1684f01ec27e270d8d3b 1183 SUPERFAMILY SSF52172 1055 1170 2.28E-29 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_10645 f4cf1f6509ed1684f01ec27e270d8d3b 1183 SUPERFAMILY SSF47384 798 874 8.63E-19 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN78_10645 f4cf1f6509ed1684f01ec27e270d8d3b 1183 Pfam PF00512 His Kinase A (phospho-acceptor) domain 808 873 3.7E-18 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_10645 f4cf1f6509ed1684f01ec27e270d8d3b 1183 PRINTS PR00344 Bacterial sensor protein C-terminal signature 974 984 5.0E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_10645 f4cf1f6509ed1684f01ec27e270d8d3b 1183 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1016 1029 5.0E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_10645 f4cf1f6509ed1684f01ec27e270d8d3b 1183 PRINTS PR00344 Bacterial sensor protein C-terminal signature 956 970 5.0E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_10645 f4cf1f6509ed1684f01ec27e270d8d3b 1183 PRINTS PR00344 Bacterial sensor protein C-terminal signature 992 1010 5.0E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_10645 f4cf1f6509ed1684f01ec27e270d8d3b 1183 SUPERFAMILY SSF63829 396 633 1.16E-16 T 13-10-2018 BEN78_10645 f4cf1f6509ed1684f01ec27e270d8d3b 1183 SMART SM00388 808 873 1.7E-23 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_10645 f4cf1f6509ed1684f01ec27e270d8d3b 1183 Pfam PF00072 Response regulator receiver domain 1056 1163 2.1E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_10645 f4cf1f6509ed1684f01ec27e270d8d3b 1183 Gene3D G3DSA:2.60.40.10 660 760 6.3E-14 T 13-10-2018 IPR013783 Immunoglobulin-like fold BEN78_10645 f4cf1f6509ed1684f01ec27e270d8d3b 1183 SUPERFAMILY SSF55874 862 1031 3.01E-45 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_10645 f4cf1f6509ed1684f01ec27e270d8d3b 1183 Gene3D G3DSA:3.30.565.10 872 1034 5.0E-47 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_10645 f4cf1f6509ed1684f01ec27e270d8d3b 1183 Pfam PF07494 Two component regulator propeller 36 58 8.7E-4 T 13-10-2018 IPR011110 Two component regulator propeller BEN78_10645 f4cf1f6509ed1684f01ec27e270d8d3b 1183 Pfam PF07494 Two component regulator propeller 175 196 0.0077 T 13-10-2018 IPR011110 Two component regulator propeller BEN78_10645 f4cf1f6509ed1684f01ec27e270d8d3b 1183 Gene3D G3DSA:2.130.10.10 520 641 1.0E-14 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BEN78_10645 f4cf1f6509ed1684f01ec27e270d8d3b 1183 Gene3D G3DSA:2.130.10.10 300 519 4.2E-16 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BEN78_10645 f4cf1f6509ed1684f01ec27e270d8d3b 1183 SUPERFAMILY SSF63829 37 238 4.25E-13 T 13-10-2018 BEN78_10645 f4cf1f6509ed1684f01ec27e270d8d3b 1183 Pfam PF07495 Y_Y_Y domain 692 753 2.4E-10 T 13-10-2018 IPR011123 Two component regulator three Y BEN78_10645 f4cf1f6509ed1684f01ec27e270d8d3b 1183 Gene3D G3DSA:1.10.287.130 780 871 4.2E-24 T 13-10-2018 BEN78_10645 f4cf1f6509ed1684f01ec27e270d8d3b 1183 Gene3D G3DSA:3.40.50.2300 1053 1174 1.4E-27 T 13-10-2018 BEN78_10645 f4cf1f6509ed1684f01ec27e270d8d3b 1183 SMART SM00448 1054 1165 7.0E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_13510 b723546e64664aed6cc687ab1e01580a 315 Gene3D G3DSA:1.10.10.10 8 94 3.8E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_13510 b723546e64664aed6cc687ab1e01580a 315 SUPERFAMILY SSF46785 10 117 7.89E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_13510 b723546e64664aed6cc687ab1e01580a 315 Pfam PF03466 LysR substrate binding domain 95 301 2.1E-43 T 13-10-2018 IPR005119 LysR, substrate-binding BEN78_13510 b723546e64664aed6cc687ab1e01580a 315 SUPERFAMILY SSF53850 95 305 8.53E-45 T 13-10-2018 BEN78_13510 b723546e64664aed6cc687ab1e01580a 315 Gene3D G3DSA:3.40.190.290 97 301 8.3E-63 T 13-10-2018 BEN78_13510 b723546e64664aed6cc687ab1e01580a 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 1.3E-18 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_03405 9bed9f8d989847580fe5981c16af8edd 215 Gene3D G3DSA:1.20.1260.10 56 195 1.5E-5 T 13-10-2018 IPR012347 Ferritin-like BEN78_03405 9bed9f8d989847580fe5981c16af8edd 215 SUPERFAMILY SSF47240 54 186 1.12E-19 T 13-10-2018 IPR009078 Ferritin-like superfamily BEN78_03405 9bed9f8d989847580fe5981c16af8edd 215 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 55 213 1.9E-39 T 13-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 BEN78_03405 9bed9f8d989847580fe5981c16af8edd 215 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 15 215 29.854 T 13-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 BEN78_00660 4aa540ff4d95661afc8ded7034a8e6a2 197 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 99 1.9E-6 T 13-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 BEN78_00660 4aa540ff4d95661afc8ded7034a8e6a2 197 Pfam PF01106 NifU-like domain 114 178 7.3E-19 T 13-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 BEN78_00660 4aa540ff4d95661afc8ded7034a8e6a2 197 Gene3D G3DSA:2.60.300.12 1 99 1.1E-9 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 BEN78_00660 4aa540ff4d95661afc8ded7034a8e6a2 197 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 119 178 2.0E-22 T 13-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 BEN78_00660 4aa540ff4d95661afc8ded7034a8e6a2 197 SUPERFAMILY SSF117916 103 185 3.92E-21 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily BEN78_00660 4aa540ff4d95661afc8ded7034a8e6a2 197 SUPERFAMILY SSF89360 1 98 8.04E-16 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 BEN78_00660 4aa540ff4d95661afc8ded7034a8e6a2 197 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 192 36.208 T 13-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 BEN78_00660 4aa540ff4d95661afc8ded7034a8e6a2 197 Gene3D G3DSA:3.30.300.130 106 192 3.9E-21 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily BEN78_00475 28681687c18af0597ebd14f2aab9c569 450 PIRSF PIRSF029063 1 450 1.9E-114 T 13-10-2018 IPR011225 Type IV secretory pathway, VirJ component BEN78_00475 28681687c18af0597ebd14f2aab9c569 450 Pfam PF06057 Bacterial virulence protein (VirJ) 259 445 2.4E-71 T 13-10-2018 IPR010333 Bacterial virulence BEN78_00475 28681687c18af0597ebd14f2aab9c569 450 Gene3D G3DSA:3.40.50.1820 242 445 3.4E-12 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_00475 28681687c18af0597ebd14f2aab9c569 450 SUPERFAMILY SSF53474 245 444 1.0E-23 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_08905 6eaef44127a1a0f34884dce254ca1538 670 Pfam PF03717 Penicillin-binding Protein dimerisation domain 67 235 4.2E-39 T 13-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 BEN78_08905 6eaef44127a1a0f34884dce254ca1538 670 Gene3D G3DSA:3.90.1310.10 68 246 2.1E-38 T 13-10-2018 BEN78_08905 6eaef44127a1a0f34884dce254ca1538 670 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 21 609 9.6E-198 T 13-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BEN78_08905 6eaef44127a1a0f34884dce254ca1538 670 SUPERFAMILY SSF56601 251 609 2.44E-88 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BEN78_08905 6eaef44127a1a0f34884dce254ca1538 670 Gene3D G3DSA:3.40.710.10 250 623 2.2E-89 T 13-10-2018 BEN78_08905 6eaef44127a1a0f34884dce254ca1538 670 Gene3D G3DSA:3.30.1390.30 87 162 2.1E-38 T 13-10-2018 BEN78_08905 6eaef44127a1a0f34884dce254ca1538 670 Pfam PF00905 Penicillin binding protein transpeptidase domain 268 606 2.7E-62 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BEN78_08905 6eaef44127a1a0f34884dce254ca1538 670 SUPERFAMILY SSF56519 59 250 5.36E-44 T 13-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 BEN78_15265 7e8a059d8d6ee692510419587d7475f6 303 Pfam PF03466 LysR substrate binding domain 87 289 1.9E-36 T 13-10-2018 IPR005119 LysR, substrate-binding BEN78_15265 7e8a059d8d6ee692510419587d7475f6 303 Gene3D G3DSA:3.40.190.290 90 291 3.3E-54 T 13-10-2018 BEN78_15265 7e8a059d8d6ee692510419587d7475f6 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 4.2E-19 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_15265 7e8a059d8d6ee692510419587d7475f6 303 SUPERFAMILY SSF46785 4 110 1.45E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_15265 7e8a059d8d6ee692510419587d7475f6 303 SUPERFAMILY SSF53850 88 296 3.8E-39 T 13-10-2018 BEN78_15265 7e8a059d8d6ee692510419587d7475f6 303 Gene3D G3DSA:1.10.10.10 3 87 5.4E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_00545 be424cb0c342c2719b6fd8fe23e35b37 292 SUPERFAMILY SSF54713 55 145 1.81E-20 T 13-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 BEN78_00545 be424cb0c342c2719b6fd8fe23e35b37 292 Gene3D G3DSA:3.30.479.20 153 271 1.0E-38 T 13-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 BEN78_00545 be424cb0c342c2719b6fd8fe23e35b37 292 Gene3D G3DSA:1.10.8.10 1 55 4.3E-25 T 13-10-2018 BEN78_00545 be424cb0c342c2719b6fd8fe23e35b37 292 SUPERFAMILY SSF46934 1 55 1.63E-17 T 13-10-2018 IPR009060 UBA-like superfamily GO:0005515 BEN78_00545 be424cb0c342c2719b6fd8fe23e35b37 292 SUPERFAMILY SSF54713 150 289 8.63E-46 T 13-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 BEN78_00545 be424cb0c342c2719b6fd8fe23e35b37 292 Gene3D G3DSA:1.10.286.20 189 237 1.0E-38 T 13-10-2018 BEN78_00545 be424cb0c342c2719b6fd8fe23e35b37 292 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 13-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BEN78_00545 be424cb0c342c2719b6fd8fe23e35b37 292 Hamap MF_00050 Elongation factor Ts [tsf]. 1 289 73.341 T 13-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BEN78_00545 be424cb0c342c2719b6fd8fe23e35b37 292 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 289 5.0E-97 T 13-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BEN78_00545 be424cb0c342c2719b6fd8fe23e35b37 292 Pfam PF00889 Elongation factor TS 70 272 1.9E-64 T 13-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 BEN78_00545 be424cb0c342c2719b6fd8fe23e35b37 292 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 13-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BEN78_00545 be424cb0c342c2719b6fd8fe23e35b37 292 Gene3D G3DSA:3.30.479.20 56 147 1.6E-24 T 13-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 BEN78_10855 d32c2df5dda7723528bf7b56ac2919b7 239 Gene3D G3DSA:3.40.50.300 1 239 2.4E-70 T 13-10-2018 BEN78_10855 d32c2df5dda7723528bf7b56ac2919b7 239 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN78_10855 d32c2df5dda7723528bf7b56ac2919b7 239 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 2 239 9.7E-116 T 13-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 BEN78_10855 d32c2df5dda7723528bf7b56ac2919b7 239 Pfam PF00005 ABC transporter 18 164 8.8E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_10855 d32c2df5dda7723528bf7b56ac2919b7 239 SMART SM00382 26 211 6.9E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_10855 d32c2df5dda7723528bf7b56ac2919b7 239 SUPERFAMILY SSF52540 2 234 1.18E-65 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_10855 d32c2df5dda7723528bf7b56ac2919b7 239 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 213 234 3.4E-6 T 13-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal BEN78_09780 e33aa8d4a3570fed22731a3913128628 197 PIRSF PIRSF006806 1 186 2.3E-24 T 13-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase BEN78_09780 e33aa8d4a3570fed22731a3913128628 197 Gene3D G3DSA:3.40.50.10420 3 188 3.9E-42 T 13-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily BEN78_09780 e33aa8d4a3570fed22731a3913128628 197 SUPERFAMILY SSF100950 3 188 4.46E-45 T 13-10-2018 IPR037171 NagB/RpiA transferase-like BEN78_09780 e33aa8d4a3570fed22731a3913128628 197 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 6 183 4.3E-41 T 13-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase BEN78_09780 e33aa8d4a3570fed22731a3913128628 197 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 6 183 4.8E-29 T 13-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase BEN78_11415 0ab9d25bdd91482ba474b35aad209bbf 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 1.8E-22 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BEN78_11415 0ab9d25bdd91482ba474b35aad209bbf 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 1.8E-22 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BEN78_11415 0ab9d25bdd91482ba474b35aad209bbf 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 1.8E-22 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BEN78_11415 0ab9d25bdd91482ba474b35aad209bbf 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 1.8E-22 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BEN78_11415 0ab9d25bdd91482ba474b35aad209bbf 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 1.8E-22 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BEN78_11415 0ab9d25bdd91482ba474b35aad209bbf 467 SUPERFAMILY SSF48163 299 461 8.63E-39 T 13-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 BEN78_11415 0ab9d25bdd91482ba474b35aad209bbf 467 Gene3D G3DSA:1.10.10.350 368 466 2.2E-27 T 13-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 BEN78_11415 0ab9d25bdd91482ba474b35aad209bbf 467 SUPERFAMILY SSF52374 4 294 1.34E-104 T 13-10-2018 BEN78_11415 0ab9d25bdd91482ba474b35aad209bbf 467 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 305 6.0E-97 T 13-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 BEN78_11415 0ab9d25bdd91482ba474b35aad209bbf 467 Gene3D G3DSA:3.40.50.620 2 314 3.0E-128 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_11415 0ab9d25bdd91482ba474b35aad209bbf 467 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 461 30.853 T 13-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 BEN78_11415 0ab9d25bdd91482ba474b35aad209bbf 467 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 459 1.3E-166 T 13-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 BEN78_11415 0ab9d25bdd91482ba474b35aad209bbf 467 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN78_15395 2c02d4e39aa3d7bfcd966d25127fe7c5 299 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 6 299 31.242 T 13-10-2018 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 BEN78_15395 2c02d4e39aa3d7bfcd966d25127fe7c5 299 Pfam PF02649 Type I GTP cyclohydrolase folE2 6 295 7.3E-66 T 13-10-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 BEN78_00960 bd033aaf4961cf5064e37a781510eee3 279 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 235 261 - T 13-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 BEN78_00960 bd033aaf4961cf5064e37a781510eee3 279 Pfam PF01148 Cytidylyltransferase family 4 272 3.7E-65 T 13-10-2018 BEN78_01195 d82989207a3b805e717456aae4b97e7d 355 Gene3D G3DSA:1.10.260.40 1 57 2.1E-18 T 13-10-2018 BEN78_01195 d82989207a3b805e717456aae4b97e7d 355 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 47 5.5E-13 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN78_01195 d82989207a3b805e717456aae4b97e7d 355 Gene3D G3DSA:3.40.50.2300 61 306 2.0E-67 T 13-10-2018 BEN78_01195 d82989207a3b805e717456aae4b97e7d 355 SUPERFAMILY SSF53822 60 329 9.62E-63 T 13-10-2018 IPR028082 Periplasmic binding protein-like I BEN78_01195 d82989207a3b805e717456aae4b97e7d 355 Pfam PF13377 Periplasmic binding protein-like domain 168 329 3.6E-33 T 13-10-2018 BEN78_01195 d82989207a3b805e717456aae4b97e7d 355 SMART SM00354 1 70 1.8E-21 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN78_01195 d82989207a3b805e717456aae4b97e7d 355 Gene3D G3DSA:3.40.50.2300 160 289 2.0E-67 T 13-10-2018 BEN78_01195 d82989207a3b805e717456aae4b97e7d 355 SUPERFAMILY SSF47413 1 56 2.53E-14 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN78_07465 e523ac46584b23974e4bffe79d84fe59 269 SUPERFAMILY SSF52096 11 268 6.08E-77 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BEN78_07465 e523ac46584b23974e4bffe79d84fe59 269 Gene3D G3DSA:3.90.226.10 12 269 4.2E-79 T 13-10-2018 BEN78_07465 e523ac46584b23974e4bffe79d84fe59 269 Pfam PF00378 Enoyl-CoA hydratase/isomerase 24 268 5.9E-57 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 BEN78_07465 e523ac46584b23974e4bffe79d84fe59 269 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 110 130 - T 13-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 BEN78_05095 17ca2d091d2522eac785b9ea9848c2a0 398 Pfam PF06224 Winged helix DNA-binding domain 38 382 1.6E-79 T 13-10-2018 IPR009351 Protein of unknown function DUF1006 BEN78_00840 5f5f8101e8ef8580a0bfe1bb495b53f9 213 SMART SM00448 2 115 2.5E-33 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_00840 5f5f8101e8ef8580a0bfe1bb495b53f9 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 4.7E-15 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_00840 5f5f8101e8ef8580a0bfe1bb495b53f9 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 4.7E-15 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_00840 5f5f8101e8ef8580a0bfe1bb495b53f9 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 4.7E-15 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_00840 5f5f8101e8ef8580a0bfe1bb495b53f9 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 206 4.0E-20 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_00840 5f5f8101e8ef8580a0bfe1bb495b53f9 213 SMART SM00421 150 207 1.8E-25 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_00840 5f5f8101e8ef8580a0bfe1bb495b53f9 213 SUPERFAMILY SSF46894 145 212 6.46E-22 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BEN78_00840 5f5f8101e8ef8580a0bfe1bb495b53f9 213 SUPERFAMILY SSF52172 1 133 6.26E-35 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_00840 5f5f8101e8ef8580a0bfe1bb495b53f9 213 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_00840 5f5f8101e8ef8580a0bfe1bb495b53f9 213 Pfam PF00072 Response regulator receiver domain 4 115 1.9E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_00840 5f5f8101e8ef8580a0bfe1bb495b53f9 213 Gene3D G3DSA:3.40.50.12740 2 213 6.4E-71 T 13-10-2018 BEN78_15045 4910769df4e92505db397e7cc5f4071d 148 SUPERFAMILY SSF46785 10 142 1.55E-37 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_15045 4910769df4e92505db397e7cc5f4071d 148 Gene3D G3DSA:1.10.10.10 4 148 4.2E-42 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_15045 4910769df4e92505db397e7cc5f4071d 148 Pfam PF01638 HxlR-like helix-turn-helix 20 104 5.4E-20 T 13-10-2018 IPR002577 Helix-turn-helix, HxlR type BEN78_05220 82d5e708d9416d445f3aa4d8096d4e1c 224 Gene3D G3DSA:3.40.50.1000 16 218 4.3E-59 T 13-10-2018 IPR023214 HAD superfamily BEN78_05220 82d5e708d9416d445f3aa4d8096d4e1c 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 13 24 1.9E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BEN78_05220 82d5e708d9416d445f3aa4d8096d4e1c 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 109 122 1.9E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BEN78_05220 82d5e708d9416d445f3aa4d8096d4e1c 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 140 156 1.9E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BEN78_05220 82d5e708d9416d445f3aa4d8096d4e1c 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 94 196 2.0E-9 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BEN78_05220 82d5e708d9416d445f3aa4d8096d4e1c 224 SUPERFAMILY SSF56784 15 223 1.31E-57 T 13-10-2018 IPR036412 HAD-like superfamily BEN78_05220 82d5e708d9416d445f3aa4d8096d4e1c 224 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 17 222 3.9E-64 T 13-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 BEN78_05220 82d5e708d9416d445f3aa4d8096d4e1c 224 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 13 223 32.544 T 13-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 BEN78_05220 82d5e708d9416d445f3aa4d8096d4e1c 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 110 190 6.6E-8 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BEN78_05220 82d5e708d9416d445f3aa4d8096d4e1c 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 17 195 5.8E-32 T 13-10-2018 BEN78_05220 82d5e708d9416d445f3aa4d8096d4e1c 224 Gene3D G3DSA:1.10.150.240 28 95 4.3E-59 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BEN78_02730 1b4ba8484b505c638d0a7fdf4231fb0b 265 Pfam PF01618 MotA/TolQ/ExbB proton channel family 119 248 3.1E-40 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel BEN78_02730 1b4ba8484b505c638d0a7fdf4231fb0b 265 TIGRFAM TIGR02796 tolQ: protein TolQ 46 260 9.8E-88 T 13-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 BEN78_02730 1b4ba8484b505c638d0a7fdf4231fb0b 265 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 45 265 42.812 T 13-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 BEN78_11090 3fe8d18f92fd434cc7a539b783ac5be6 201 SUPERFAMILY SSF52166 9 200 3.27E-60 T 13-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 BEN78_11090 3fe8d18f92fd434cc7a539b783ac5be6 201 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 13 198 8.0E-63 T 13-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_11090 3fe8d18f92fd434cc7a539b783ac5be6 201 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 4 201 28.939 T 13-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_11090 3fe8d18f92fd434cc7a539b783ac5be6 201 Gene3D G3DSA:3.40.1370.10 4 201 9.3E-58 T 13-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 BEN78_11090 3fe8d18f92fd434cc7a539b783ac5be6 201 Pfam PF00573 Ribosomal protein L4/L1 family 13 198 6.9E-54 T 13-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 BEN78_10180 eeb6e007d32f68a32c67644669fe9010 125 SUPERFAMILY SSF54593 6 121 4.4E-20 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN78_10180 eeb6e007d32f68a32c67644669fe9010 125 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 38 5.5E-5 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BEN78_10180 eeb6e007d32f68a32c67644669fe9010 125 Gene3D G3DSA:3.10.180.10 6 119 4.6E-17 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN78_12645 7eea9020ee684be33946c29d290d4247 221 Pfam PF02630 SCO1/SenC 52 189 1.3E-23 T 13-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_12645 7eea9020ee684be33946c29d290d4247 221 SUPERFAMILY SSF52833 47 215 6.98E-38 T 13-10-2018 IPR036249 Thioredoxin-like superfamily BEN78_12645 7eea9020ee684be33946c29d290d4247 221 Gene3D G3DSA:3.40.30.10 40 220 9.5E-42 T 13-10-2018 BEN78_09460 f1a71e78063f2eff1d39e6986b2fbfb7 365 SUPERFAMILY SSF53927 8 149 8.87E-43 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 BEN78_09460 f1a71e78063f2eff1d39e6986b2fbfb7 365 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 151 360 2.9E-51 T 13-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 BEN78_09460 f1a71e78063f2eff1d39e6986b2fbfb7 365 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 93 - T 13-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 BEN78_09460 f1a71e78063f2eff1d39e6986b2fbfb7 365 Pfam PF01872 RibD C-terminal domain 152 355 4.8E-44 T 13-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 BEN78_09460 f1a71e78063f2eff1d39e6986b2fbfb7 365 Gene3D G3DSA:3.40.140.10 3 140 4.3E-42 T 13-10-2018 BEN78_09460 f1a71e78063f2eff1d39e6986b2fbfb7 365 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 7 104 1.8E-18 T 13-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain BEN78_09460 f1a71e78063f2eff1d39e6986b2fbfb7 365 PIRSF PIRSF006769 4 362 6.8E-121 T 13-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 BEN78_09460 f1a71e78063f2eff1d39e6986b2fbfb7 365 SUPERFAMILY SSF53597 150 357 3.31E-57 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 BEN78_09460 f1a71e78063f2eff1d39e6986b2fbfb7 365 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 12 356 4.4E-107 T 13-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 BEN78_09460 f1a71e78063f2eff1d39e6986b2fbfb7 365 Gene3D G3DSA:3.40.430.10 141 363 4.2E-67 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 BEN78_10385 0b43b53d626ac4ea14df6de498908c97 318 SUPERFAMILY SSF88723 18 172 1.6E-40 T 13-10-2018 IPR029060 PIN-like domain superfamily BEN78_10385 0b43b53d626ac4ea14df6de498908c97 318 Gene3D G3DSA:1.10.150.20 186 265 2.6E-76 T 13-10-2018 BEN78_10385 0b43b53d626ac4ea14df6de498908c97 318 SUPERFAMILY SSF47807 184 303 6.28E-25 T 13-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily BEN78_10385 0b43b53d626ac4ea14df6de498908c97 318 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 19 165 1.1E-39 T 13-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 BEN78_10385 0b43b53d626ac4ea14df6de498908c97 318 Gene3D G3DSA:3.40.50.1010 19 296 2.6E-76 T 13-10-2018 BEN78_10385 0b43b53d626ac4ea14df6de498908c97 318 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 183 278 2.3E-25 T 13-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 BEN78_10385 0b43b53d626ac4ea14df6de498908c97 318 SMART SM00279 185 220 5.3E-13 T 13-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 BEN78_10385 0b43b53d626ac4ea14df6de498908c97 318 SMART SM00475 17 280 2.0E-77 T 13-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 BEN78_16065 cb488df055a463aaa385b536641c119f 319 Hamap MF_00313 Glutaminase [glsA]. 16 319 44.003 T 13-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 BEN78_16065 cb488df055a463aaa385b536641c119f 319 SUPERFAMILY SSF56601 30 319 1.8E-107 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BEN78_16065 cb488df055a463aaa385b536641c119f 319 Gene3D G3DSA:3.40.710.10 16 319 4.7E-106 T 13-10-2018 BEN78_16065 cb488df055a463aaa385b536641c119f 319 Pfam PF04960 Glutaminase 36 319 4.6E-108 T 13-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 BEN78_16065 cb488df055a463aaa385b536641c119f 319 TIGRFAM TIGR03814 Gln_ase: glutaminase A 26 319 5.8E-119 T 13-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 BEN78_02615 4e4ed923cba0636a90a036ec2fa4717d 153 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 99 3.2E-8 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BEN78_02615 4e4ed923cba0636a90a036ec2fa4717d 153 Gene3D G3DSA:3.40.190.10 25 105 3.7E-11 T 13-10-2018 BEN78_02615 4e4ed923cba0636a90a036ec2fa4717d 153 SUPERFAMILY SSF53850 3 98 9.62E-13 T 13-10-2018 BEN78_00465 8d7bd64297e9d8bb19471a9532d0d457 1175 Gene3D G3DSA:2.30.30.840 504 562 7.2E-231 T 13-10-2018 BEN78_00465 8d7bd64297e9d8bb19471a9532d0d457 1175 Pfam PF00271 Helicase conserved C-terminal domain 830 930 6.6E-16 T 13-10-2018 IPR001650 Helicase, C-terminal BEN78_00465 8d7bd64297e9d8bb19471a9532d0d457 1175 Pfam PF00270 DEAD/DEAH box helicase 626 783 5.3E-16 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BEN78_00465 8d7bd64297e9d8bb19471a9532d0d457 1175 Gene3D G3DSA:3.40.50.11140 376 474 2.3E-16 T 13-10-2018 BEN78_00465 8d7bd64297e9d8bb19471a9532d0d457 1175 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 155 1103 0.0 T 13-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 BEN78_00465 8d7bd64297e9d8bb19471a9532d0d457 1175 Gene3D G3DSA:3.90.1150.50 1026 1170 4.8E-42 T 13-10-2018 IPR037235 TRCF-like, C-terminal domain BEN78_00465 8d7bd64297e9d8bb19471a9532d0d457 1175 Pfam PF03461 TRCF domain 1030 1121 1.7E-26 T 13-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 BEN78_00465 8d7bd64297e9d8bb19471a9532d0d457 1175 Gene3D G3DSA:3.40.50.300 500 1011 7.2E-231 T 13-10-2018 BEN78_00465 8d7bd64297e9d8bb19471a9532d0d457 1175 SMART SM00490 847 931 9.6E-18 T 13-10-2018 IPR001650 Helicase, C-terminal BEN78_00465 8d7bd64297e9d8bb19471a9532d0d457 1175 SUPERFAMILY SSF52540 544 804 5.89E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_00465 8d7bd64297e9d8bb19471a9532d0d457 1175 SUPERFAMILY SSF143517 1015 1167 1.07E-41 T 13-10-2018 IPR037235 TRCF-like, C-terminal domain BEN78_00465 8d7bd64297e9d8bb19471a9532d0d457 1175 Gene3D G3DSA:3.40.50.300 563 802 7.2E-231 T 13-10-2018 BEN78_00465 8d7bd64297e9d8bb19471a9532d0d457 1175 SMART SM00487 621 811 7.2E-35 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN78_00465 8d7bd64297e9d8bb19471a9532d0d457 1175 Gene3D G3DSA:3.40.50.11180 30 355 1.2E-110 T 13-10-2018 BEN78_00465 8d7bd64297e9d8bb19471a9532d0d457 1175 Pfam PF02559 CarD-like/TRCF domain 501 594 4.1E-24 T 13-10-2018 IPR003711 CarD-like/TRCF domain BEN78_00465 8d7bd64297e9d8bb19471a9532d0d457 1175 SMART SM01058 500 597 3.6E-45 T 13-10-2018 IPR003711 CarD-like/TRCF domain BEN78_00465 8d7bd64297e9d8bb19471a9532d0d457 1175 SUPERFAMILY SSF52540 23 360 4.11E-93 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_00465 8d7bd64297e9d8bb19471a9532d0d457 1175 SUPERFAMILY SSF52540 375 486 1.75E-20 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_00465 8d7bd64297e9d8bb19471a9532d0d457 1175 SMART SM00982 1029 1129 2.6E-48 T 13-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 BEN78_00465 8d7bd64297e9d8bb19471a9532d0d457 1175 SUPERFAMILY SSF52540 803 1011 2.37E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_00465 8d7bd64297e9d8bb19471a9532d0d457 1175 Gene3D G3DSA:3.30.2060.10 137 222 1.2E-110 T 13-10-2018 BEN78_00465 8d7bd64297e9d8bb19471a9532d0d457 1175 SUPERFAMILY SSF141259 492 569 9.94E-22 T 13-10-2018 IPR036101 CarD-like/TRCF domain superfamily BEN78_00465 8d7bd64297e9d8bb19471a9532d0d457 1175 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 29 1113 27.98 T 13-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 BEN78_08875 da93dd9f4ee777e0b3c3f50e712b6276 186 SUPERFAMILY SSF52218 4 178 1.51E-46 T 13-10-2018 IPR029039 Flavoprotein-like superfamily BEN78_08875 da93dd9f4ee777e0b3c3f50e712b6276 186 Pfam PF03358 NADPH-dependent FMN reductase 4 149 3.7E-37 T 13-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 BEN78_08875 da93dd9f4ee777e0b3c3f50e712b6276 186 Gene3D G3DSA:3.40.50.360 4 182 1.2E-50 T 13-10-2018 IPR029039 Flavoprotein-like superfamily BEN78_09475 3b12d35c5bfd81ec6f8b35899070445a 155 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 15 150 2.6E-39 T 13-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BEN78_09475 3b12d35c5bfd81ec6f8b35899070445a 155 Gene3D G3DSA:3.40.50.960 1 154 2.4E-53 T 13-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BEN78_09475 3b12d35c5bfd81ec6f8b35899070445a 155 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 14 151 1.1E-49 T 13-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BEN78_09475 3b12d35c5bfd81ec6f8b35899070445a 155 SUPERFAMILY SSF52121 9 154 7.06E-51 T 13-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BEN78_09475 3b12d35c5bfd81ec6f8b35899070445a 155 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 9 154 27.532 T 13-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BEN78_15130 1b07cd48e13969a56f46c3b13c9da686 307 Gene3D G3DSA:1.10.10.10 4 91 3.3E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_15130 1b07cd48e13969a56f46c3b13c9da686 307 Pfam PF03466 LysR substrate binding domain 100 300 3.8E-22 T 13-10-2018 IPR005119 LysR, substrate-binding BEN78_15130 1b07cd48e13969a56f46c3b13c9da686 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 4.2E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_15130 1b07cd48e13969a56f46c3b13c9da686 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 4.2E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_15130 1b07cd48e13969a56f46c3b13c9da686 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 4.2E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_15130 1b07cd48e13969a56f46c3b13c9da686 307 Gene3D G3DSA:3.40.190.10 94 296 1.5E-58 T 13-10-2018 BEN78_15130 1b07cd48e13969a56f46c3b13c9da686 307 SUPERFAMILY SSF53850 94 299 3.49E-39 T 13-10-2018 BEN78_15130 1b07cd48e13969a56f46c3b13c9da686 307 Gene3D G3DSA:3.40.190.10 175 272 1.5E-58 T 13-10-2018 BEN78_15130 1b07cd48e13969a56f46c3b13c9da686 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 71 1.1E-14 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_15130 1b07cd48e13969a56f46c3b13c9da686 307 SUPERFAMILY SSF46785 9 86 2.07E-13 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_10500 2ccd145e9a38190bffe69c4c32c76a18 424 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 22 281 9.0E-67 T 13-10-2018 IPR017039 Virulence factor BrkB BEN78_10500 2ccd145e9a38190bffe69c4c32c76a18 424 Pfam PF03631 Virulence factor BrkB 33 279 2.8E-50 T 13-10-2018 IPR017039 Virulence factor BrkB BEN78_10500 2ccd145e9a38190bffe69c4c32c76a18 424 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 21 309 20.971 T 13-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial BEN78_00650 b71ac1685e44ee635bce43580a469830 142 Gene3D G3DSA:1.10.760.10 45 130 9.5E-23 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BEN78_00650 b71ac1685e44ee635bce43580a469830 142 SUPERFAMILY SSF46626 61 130 6.35E-19 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BEN78_00650 b71ac1685e44ee635bce43580a469830 142 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 61 125 1.1E-6 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_16240 842305658edabdd5a61d8b19437d5434 150 Pfam PF13924 Lipocalin-like domain 15 146 1.0E-40 T 13-10-2018 IPR024311 Lipocalin-like domain BEN78_10090 9bff90089e92a80295680fd9431ba0eb 1800 SUPERFAMILY SSF52172 1678 1794 3.56E-35 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_10090 9bff90089e92a80295680fd9431ba0eb 1800 Pfam PF01627 Hpt domain 666 756 4.0E-6 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BEN78_10090 9bff90089e92a80295680fd9431ba0eb 1800 Pfam PF01627 Hpt domain 506 597 2.9E-13 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BEN78_10090 9bff90089e92a80295680fd9431ba0eb 1800 Pfam PF01627 Hpt domain 1039 1130 8.6E-14 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BEN78_10090 9bff90089e92a80295680fd9431ba0eb 1800 Gene3D G3DSA:3.40.50.12740 1676 1799 6.1E-39 T 13-10-2018 BEN78_10090 9bff90089e92a80295680fd9431ba0eb 1800 SMART SM00448 1676 1789 2.7E-34 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_10090 9bff90089e92a80295680fd9431ba0eb 1800 SUPERFAMILY SSF50341 1523 1652 1.15E-23 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 BEN78_10090 9bff90089e92a80295680fd9431ba0eb 1800 Gene3D G3DSA:1.20.120.160 498 645 2.4E-20 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 BEN78_10090 9bff90089e92a80295680fd9431ba0eb 1800 Gene3D G3DSA:1.20.120.160 1033 1162 5.6E-22 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 BEN78_10090 9bff90089e92a80295680fd9431ba0eb 1800 SMART SM00387 1383 1524 4.3E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_10090 9bff90089e92a80295680fd9431ba0eb 1800 SUPERFAMILY SSF47226 665 778 7.2E-12 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 BEN78_10090 9bff90089e92a80295680fd9431ba0eb 1800 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 1202 1337 3.5E-7 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 BEN78_10090 9bff90089e92a80295680fd9431ba0eb 1800 SMART SM01231 1200 1338 4.1E-10 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 BEN78_10090 9bff90089e92a80295680fd9431ba0eb 1800 SMART SM00260 1516 1653 1.1E-19 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BEN78_10090 9bff90089e92a80295680fd9431ba0eb 1800 Gene3D G3DSA:2.30.30.40 1524 1649 1.6E-31 T 13-10-2018 BEN78_10090 9bff90089e92a80295680fd9431ba0eb 1800 SUPERFAMILY SSF47226 1036 1156 1.7E-23 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 BEN78_10090 9bff90089e92a80295680fd9431ba0eb 1800 SMART SM00073 1036 1133 1.8E-13 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BEN78_10090 9bff90089e92a80295680fd9431ba0eb 1800 SMART SM00073 666 758 0.03 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BEN78_10090 9bff90089e92a80295680fd9431ba0eb 1800 SMART SM00073 504 604 1.8E-7 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BEN78_10090 9bff90089e92a80295680fd9431ba0eb 1800 Gene3D G3DSA:1.20.120.160 664 785 2.4E-6 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 BEN78_10090 9bff90089e92a80295680fd9431ba0eb 1800 Gene3D G3DSA:2.40.50.180 1547 1608 1.6E-31 T 13-10-2018 BEN78_10090 9bff90089e92a80295680fd9431ba0eb 1800 SUPERFAMILY SSF47226 9 131 1.47E-13 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 BEN78_10090 9bff90089e92a80295680fd9431ba0eb 1800 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1428 1442 6.7E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_10090 9bff90089e92a80295680fd9431ba0eb 1800 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1508 1521 6.7E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_10090 9bff90089e92a80295680fd9431ba0eb 1800 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1484 1502 6.7E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_10090 9bff90089e92a80295680fd9431ba0eb 1800 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1387 1523 1.0E-11 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_10090 9bff90089e92a80295680fd9431ba0eb 1800 SUPERFAMILY SSF47226 503 621 1.02E-22 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 BEN78_10090 9bff90089e92a80295680fd9431ba0eb 1800 Gene3D G3DSA:3.30.565.10 1337 1523 2.3E-47 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_10090 9bff90089e92a80295680fd9431ba0eb 1800 Pfam PF00072 Response regulator receiver domain 1678 1789 2.2E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_10090 9bff90089e92a80295680fd9431ba0eb 1800 SUPERFAMILY SSF55874 1340 1521 7.6E-34 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_10090 9bff90089e92a80295680fd9431ba0eb 1800 Pfam PF01584 CheW-like domain 1530 1655 1.6E-16 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BEN78_09570 054eec943dcd603e0caf2307bee1333a 341 Gene3D G3DSA:3.30.1490.20 125 207 7.9E-64 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BEN78_09570 054eec943dcd603e0caf2307bee1333a 341 Gene3D G3DSA:3.30.470.20 99 326 7.9E-64 T 13-10-2018 BEN78_09570 054eec943dcd603e0caf2307bee1333a 341 Pfam PF01820 D-ala D-ala ligase N-terminus 18 100 4.5E-15 T 13-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BEN78_09570 054eec943dcd603e0caf2307bee1333a 341 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 18 333 1.5E-88 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BEN78_09570 054eec943dcd603e0caf2307bee1333a 341 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 17 334 32.489 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BEN78_09570 054eec943dcd603e0caf2307bee1333a 341 Pfam PF07478 D-ala D-ala ligase C-terminus 152 326 2.1E-47 T 13-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BEN78_09570 054eec943dcd603e0caf2307bee1333a 341 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 275 304 - T 13-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BEN78_09570 054eec943dcd603e0caf2307bee1333a 341 SUPERFAMILY SSF52440 18 110 2.11E-26 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BEN78_09570 054eec943dcd603e0caf2307bee1333a 341 Gene3D G3DSA:3.40.50.20 7 98 4.8E-27 T 13-10-2018 BEN78_09570 054eec943dcd603e0caf2307bee1333a 341 SUPERFAMILY SSF56059 110 330 1.31E-46 T 13-10-2018 BEN78_09570 054eec943dcd603e0caf2307bee1333a 341 PIRSF PIRSF039102 57 340 3.4E-74 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BEN78_09570 054eec943dcd603e0caf2307bee1333a 341 PIRSF PIRSF039102 16 57 6.6E-7 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BEN78_09570 054eec943dcd603e0caf2307bee1333a 341 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 77 88 - T 13-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BEN78_02610 3643021e775d9262778fb3c2c5dac8e2 719 Pfam PF00593 TonB dependent receptor 266 718 4.3E-46 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_02610 3643021e775d9262778fb3c2c5dac8e2 719 Gene3D G3DSA:2.170.130.10 51 182 7.2E-36 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_02610 3643021e775d9262778fb3c2c5dac8e2 719 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 75 719 4.9E-113 T 13-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 BEN78_02610 3643021e775d9262778fb3c2c5dac8e2 719 Gene3D G3DSA:2.40.170.20 185 719 6.4E-150 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_02610 3643021e775d9262778fb3c2c5dac8e2 719 Pfam PF07715 TonB-dependent Receptor Plug Domain 73 173 9.4E-14 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_02610 3643021e775d9262778fb3c2c5dac8e2 719 SUPERFAMILY SSF56935 39 719 7.59E-112 T 13-10-2018 BEN78_01920 a10991948f475303be206deeae26d515 253 Pfam PF00005 ABC transporter 17 162 8.6E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_01920 a10991948f475303be206deeae26d515 253 SMART SM00382 26 210 9.0E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_01920 a10991948f475303be206deeae26d515 253 Gene3D G3DSA:3.40.50.300 1 250 6.0E-69 T 13-10-2018 BEN78_01920 a10991948f475303be206deeae26d515 253 SUPERFAMILY SSF52540 8 215 1.81E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_06030 5a239c916d34011d20f10f969e044cb8 192 Pfam PF08534 Redoxin 29 150 3.6E-17 T 13-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 BEN78_06030 5a239c916d34011d20f10f969e044cb8 192 Gene3D G3DSA:3.40.30.10 24 161 3.6E-30 T 13-10-2018 BEN78_06030 5a239c916d34011d20f10f969e044cb8 192 ProSitePatterns PS00194 Thioredoxin family active site. 56 74 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 BEN78_06030 5a239c916d34011d20f10f969e044cb8 192 SUPERFAMILY SSF52833 26 178 6.38E-31 T 13-10-2018 IPR036249 Thioredoxin-like superfamily BEN78_01975 f0fb580e432597f72e57b317deadf44e 212 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 14 50 1.2E-14 T 13-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 BEN78_01975 f0fb580e432597f72e57b317deadf44e 212 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 20 38 0.0011 T 13-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BEN78_01975 f0fb580e432597f72e57b317deadf44e 212 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 19 205 4.3E-66 T 13-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 BEN78_01975 f0fb580e432597f72e57b317deadf44e 212 PRINTS PR00162 Rieske 2Fe-2S subunit signature 164 176 5.7E-5 T 13-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 BEN78_01975 f0fb580e432597f72e57b317deadf44e 212 PRINTS PR00162 Rieske 2Fe-2S subunit signature 133 144 5.7E-5 T 13-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 BEN78_01975 f0fb580e432597f72e57b317deadf44e 212 Pfam PF00355 Rieske [2Fe-2S] domain 110 190 1.2E-9 T 13-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 BEN78_01975 f0fb580e432597f72e57b317deadf44e 212 Gene3D G3DSA:2.102.10.10 53 205 2.0E-42 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BEN78_01975 f0fb580e432597f72e57b317deadf44e 212 SUPERFAMILY SSF50022 41 205 1.19E-37 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BEN78_11875 cf192d7f914efb3903a0b2ed79b793de 438 Pfam PF06850 PHB de-polymerase C-terminus 211 411 5.7E-95 T 13-10-2018 IPR009656 PHB de-polymerase, C-terminal BEN78_11875 cf192d7f914efb3903a0b2ed79b793de 438 TIGRFAM TIGR01849 PHB_depoly_PhaZ: polyhydroxyalkanoate depolymerase, intracellular 2 411 5.4E-178 T 13-10-2018 IPR010915 Polyhydroxyalkanoate depolymerase BEN78_11875 cf192d7f914efb3903a0b2ed79b793de 438 PIRSF PIRSF020818 1 424 1.2E-187 T 13-10-2018 IPR010915 Polyhydroxyalkanoate depolymerase BEN78_11875 cf192d7f914efb3903a0b2ed79b793de 438 SUPERFAMILY SSF53474 107 409 2.63E-29 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_11875 cf192d7f914efb3903a0b2ed79b793de 438 Gene3D G3DSA:3.40.50.1820 99 410 3.7E-8 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_09645 de3804d19a4c22999b7413bf1eacd838 1049 SUPERFAMILY SSF101967 405 485 9.42E-5 T 13-10-2018 BEN78_09645 de3804d19a4c22999b7413bf1eacd838 1049 Gene3D G3DSA:2.150.10.10 307 390 1.2E-10 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_09645 de3804d19a4c22999b7413bf1eacd838 1049 Gene3D G3DSA:2.150.10.10 563 664 1.4E-10 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_09645 de3804d19a4c22999b7413bf1eacd838 1049 Gene3D G3DSA:2.150.10.10 665 732 1.3E-9 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_09645 de3804d19a4c22999b7413bf1eacd838 1049 Gene3D G3DSA:2.150.10.10 12 93 2.4E-9 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_09645 de3804d19a4c22999b7413bf1eacd838 1049 Gene3D G3DSA:2.150.10.10 733 816 2.1E-5 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_09645 de3804d19a4c22999b7413bf1eacd838 1049 Gene3D G3DSA:2.150.10.10 94 224 6.6E-10 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_09645 de3804d19a4c22999b7413bf1eacd838 1049 Gene3D G3DSA:2.150.10.10 225 306 3.5E-10 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_09645 de3804d19a4c22999b7413bf1eacd838 1049 Gene3D G3DSA:2.150.10.10 391 485 3.5E-9 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_09645 de3804d19a4c22999b7413bf1eacd838 1049 Gene3D G3DSA:2.150.10.10 486 562 1.3E-10 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_09645 de3804d19a4c22999b7413bf1eacd838 1049 SUPERFAMILY SSF101967 314 390 4.71E-5 T 13-10-2018 BEN78_09645 de3804d19a4c22999b7413bf1eacd838 1049 SUPERFAMILY SSF101967 228 305 1.7E-5 T 13-10-2018 BEN78_09645 de3804d19a4c22999b7413bf1eacd838 1049 Gene3D G3DSA:2.150.10.10 817 973 2.6E-34 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_09645 de3804d19a4c22999b7413bf1eacd838 1049 SUPERFAMILY SSF101967 497 562 4.45E-5 T 13-10-2018 BEN78_09645 de3804d19a4c22999b7413bf1eacd838 1049 SUPERFAMILY SSF101967 568 664 9.15E-5 T 13-10-2018 BEN78_09645 de3804d19a4c22999b7413bf1eacd838 1049 Gene3D G3DSA:3.30.1300.30 974 1049 1.5E-30 T 13-10-2018 BEN78_09645 de3804d19a4c22999b7413bf1eacd838 1049 Pfam PF03895 YadA-like membrane anchor domain 989 1049 7.8E-20 T 13-10-2018 IPR005594 YadA-like, C-terminal BEN78_09645 de3804d19a4c22999b7413bf1eacd838 1049 SUPERFAMILY SSF101967 818 965 1.29E-24 T 13-10-2018 BEN78_09645 de3804d19a4c22999b7413bf1eacd838 1049 SUPERFAMILY SSF101967 97 223 2.88E-5 T 13-10-2018 BEN78_09645 de3804d19a4c22999b7413bf1eacd838 1049 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 537 581 3.0E-9 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_09645 de3804d19a4c22999b7413bf1eacd838 1049 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 708 750 3.1E-7 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_09645 de3804d19a4c22999b7413bf1eacd838 1049 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 365 408 1.3E-9 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_09645 de3804d19a4c22999b7413bf1eacd838 1049 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 280 316 7.2E-9 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_09645 de3804d19a4c22999b7413bf1eacd838 1049 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 2 29 4.4E-4 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_09645 de3804d19a4c22999b7413bf1eacd838 1049 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 942 978 1.9E-8 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_09645 de3804d19a4c22999b7413bf1eacd838 1049 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 200 244 8.2E-8 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_09645 de3804d19a4c22999b7413bf1eacd838 1049 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 67 110 5.0E-11 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_09645 de3804d19a4c22999b7413bf1eacd838 1049 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 460 501 4.8E-9 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_09645 de3804d19a4c22999b7413bf1eacd838 1049 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 639 680 9.5E-11 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_09645 de3804d19a4c22999b7413bf1eacd838 1049 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 792 832 4.9E-7 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_09645 de3804d19a4c22999b7413bf1eacd838 1049 SUPERFAMILY SSF101967 10 92 1.27E-5 T 13-10-2018 BEN78_09645 de3804d19a4c22999b7413bf1eacd838 1049 SUPERFAMILY SSF54523 953 1049 1.73E-24 T 13-10-2018 BEN78_00745 b0078547395967f8dfc7a876896e7c78 340 Pfam PF13428 Tetratricopeptide repeat 84 126 1.7E-5 T 13-10-2018 BEN78_00745 b0078547395967f8dfc7a876896e7c78 340 Gene3D G3DSA:1.25.40.10 67 207 1.4E-18 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_00745 b0078547395967f8dfc7a876896e7c78 340 SUPERFAMILY SSF48452 63 180 2.59E-13 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_11750 763d9c1687c31b11271e2fd8a75d50e2 379 SUPERFAMILY SSF50956 60 374 2.88E-26 T 13-10-2018 BEN78_11750 763d9c1687c31b11271e2fd8a75d50e2 379 Gene3D G3DSA:2.120.10.30 71 333 1.9E-15 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BEN78_13975 d9e13b0113cd8d2fcc8b0e23c564f1fc 233 Gene3D G3DSA:3.40.50.300 4 211 1.4E-60 T 13-10-2018 BEN78_13975 d9e13b0113cd8d2fcc8b0e23c564f1fc 233 PIRSF PIRSF006755 2 227 1.5E-61 T 13-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 BEN78_13975 d9e13b0113cd8d2fcc8b0e23c564f1fc 233 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 7 177 1.5E-40 T 13-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 BEN78_13975 d9e13b0113cd8d2fcc8b0e23c564f1fc 233 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 3 209 24.489 T 13-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 BEN78_13975 d9e13b0113cd8d2fcc8b0e23c564f1fc 233 Pfam PF13500 AAA domain 4 207 1.3E-32 T 13-10-2018 BEN78_13975 d9e13b0113cd8d2fcc8b0e23c564f1fc 233 SUPERFAMILY SSF52540 1 210 1.13E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_13460 b4bc1ff1c8e1d8ca76690862d90c8d52 248 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 103 231 5.0E-54 T 13-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 BEN78_13460 b4bc1ff1c8e1d8ca76690862d90c8d52 248 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 103 228 1.9E-36 T 13-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 BEN78_13460 b4bc1ff1c8e1d8ca76690862d90c8d52 248 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 95 230 4.6E-56 T 13-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 BEN78_13460 b4bc1ff1c8e1d8ca76690862d90c8d52 248 Hamap MF_00509 Cell division protein ZipA [zipA]. 5 232 17.708 T 13-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 BEN78_13460 b4bc1ff1c8e1d8ca76690862d90c8d52 248 SMART SM00771 100 230 6.4E-48 T 13-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 BEN78_13460 b4bc1ff1c8e1d8ca76690862d90c8d52 248 SUPERFAMILY SSF64383 99 236 1.02E-35 T 13-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 BEN78_13460 b4bc1ff1c8e1d8ca76690862d90c8d52 248 Gene3D G3DSA:3.30.1400.10 99 237 3.6E-38 T 13-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 BEN78_01235 b0295e0077e15ea707f7e0108287275b 159 Gene3D G3DSA:2.40.10.330 71 120 6.1E-50 T 13-10-2018 BEN78_01235 b0295e0077e15ea707f7e0108287275b 159 Gene3D G3DSA:3.10.50.40 3 153 6.1E-50 T 13-10-2018 BEN78_01235 b0295e0077e15ea707f7e0108287275b 159 SUPERFAMILY SSF54534 2 139 1.28E-30 T 13-10-2018 BEN78_01235 b0295e0077e15ea707f7e0108287275b 159 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 135 1.6E-10 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BEN78_01320 88f8b45ea95a9bfab3ae89a15ad8372f 232 Gene3D G3DSA:3.40.50.12140 27 232 9.2E-44 T 13-10-2018 BEN78_01320 88f8b45ea95a9bfab3ae89a15ad8372f 232 Pfam PF13709 Domain of unknown function (DUF4159) 33 230 5.6E-52 T 13-10-2018 IPR025297 Domain of unknown function DUF4159 BEN78_07325 0946424522e84384b0abc7e15ac69f49 267 Pfam PF14080 Domain of unknown function (DUF4261) 187 260 3.6E-16 T 13-10-2018 IPR025357 Domain of unknown function DUF4261 BEN78_02690 671f158531843ecb58657e51df4fa220 226 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 218 56.427 T 13-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 BEN78_02690 671f158531843ecb58657e51df4fa220 226 Pfam PF06508 Queuosine biosynthesis protein QueC 4 212 9.5E-76 T 13-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 BEN78_02690 671f158531843ecb58657e51df4fa220 226 SUPERFAMILY SSF52402 1 222 1.1E-63 T 13-10-2018 BEN78_02690 671f158531843ecb58657e51df4fa220 226 PIRSF PIRSF006293 1 224 4.4E-78 T 13-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 BEN78_02690 671f158531843ecb58657e51df4fa220 226 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 205 3.4E-59 T 13-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 BEN78_02690 671f158531843ecb58657e51df4fa220 226 Gene3D G3DSA:3.40.50.620 1 220 8.2E-73 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_06335 652071b3b69a993b5d64ca240a375b90 400 Pfam PF00155 Aminotransferase class I and II 30 395 2.6E-81 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BEN78_06335 652071b3b69a993b5d64ca240a375b90 400 Gene3D G3DSA:3.90.1150.10 8 395 1.2E-154 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN78_06335 652071b3b69a993b5d64ca240a375b90 400 PRINTS PR00799 Aspartate aminotransferase signature 178 197 1.3E-35 T 13-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 BEN78_06335 652071b3b69a993b5d64ca240a375b90 400 PRINTS PR00799 Aspartate aminotransferase signature 277 302 1.3E-35 T 13-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 BEN78_06335 652071b3b69a993b5d64ca240a375b90 400 PRINTS PR00799 Aspartate aminotransferase signature 344 362 1.3E-35 T 13-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 BEN78_06335 652071b3b69a993b5d64ca240a375b90 400 PRINTS PR00799 Aspartate aminotransferase signature 209 221 1.3E-35 T 13-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 BEN78_06335 652071b3b69a993b5d64ca240a375b90 400 Gene3D G3DSA:3.40.640.10 63 304 1.2E-154 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN78_06335 652071b3b69a993b5d64ca240a375b90 400 SUPERFAMILY SSF53383 3 398 3.55E-112 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_06335 652071b3b69a993b5d64ca240a375b90 400 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 247 260 - T 13-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 BEN78_02985 904ce9f8f9d114381a7e39699a012338 708 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 63 708 1.4E-73 T 13-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 BEN78_02985 904ce9f8f9d114381a7e39699a012338 708 Gene3D G3DSA:2.40.170.20 164 708 1.1E-94 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_02985 904ce9f8f9d114381a7e39699a012338 708 Pfam PF07715 TonB-dependent Receptor Plug Domain 61 154 4.5E-16 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_02985 904ce9f8f9d114381a7e39699a012338 708 Pfam PF00593 TonB dependent receptor 239 707 3.1E-45 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_02985 904ce9f8f9d114381a7e39699a012338 708 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 691 708 - T 13-10-2018 IPR010917 TonB-dependent receptor, conserved site BEN78_02985 904ce9f8f9d114381a7e39699a012338 708 Gene3D G3DSA:2.170.130.10 43 163 7.8E-31 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_02985 904ce9f8f9d114381a7e39699a012338 708 SUPERFAMILY SSF56935 23 708 2.11E-110 T 13-10-2018 BEN78_05415 4bf6790e1ad15b5c96319e3c734405eb 208 Gene3D G3DSA:3.40.50.300 1 144 4.0E-27 T 13-10-2018 BEN78_05415 4bf6790e1ad15b5c96319e3c734405eb 208 SUPERFAMILY SSF57716 145 195 7.13E-13 T 13-10-2018 BEN78_05415 4bf6790e1ad15b5c96319e3c734405eb 208 PIRSF PIRSF035805 1 202 1.3E-51 T 13-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 BEN78_05415 4bf6790e1ad15b5c96319e3c734405eb 208 Hamap MF_00124 Thymidine kinase [tdk]. 1 192 34.133 T 13-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 BEN78_05415 4bf6790e1ad15b5c96319e3c734405eb 208 Pfam PF00265 Thymidine kinase 2 187 2.1E-48 T 13-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 BEN78_05415 4bf6790e1ad15b5c96319e3c734405eb 208 SUPERFAMILY SSF52540 1 144 1.78E-40 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_09770 230b0a266c601454f36360bcd8971060 215 Gene3D G3DSA:3.30.70.260 123 195 1.0E-73 T 13-10-2018 BEN78_09770 230b0a266c601454f36360bcd8971060 215 SUPERFAMILY SSF100950 2 144 6.58E-43 T 13-10-2018 IPR037171 NagB/RpiA transferase-like BEN78_09770 230b0a266c601454f36360bcd8971060 215 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 47 210 2.5E-55 T 13-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 BEN78_09770 230b0a266c601454f36360bcd8971060 215 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 5 210 1.1E-65 T 13-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 BEN78_09770 230b0a266c601454f36360bcd8971060 215 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 1 215 32.038 T 13-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 BEN78_09770 230b0a266c601454f36360bcd8971060 215 SUPERFAMILY SSF75445 125 197 1.24E-21 T 13-10-2018 BEN78_09770 230b0a266c601454f36360bcd8971060 215 Gene3D G3DSA:3.40.50.1360 5 206 1.0E-73 T 13-10-2018 BEN78_00495 9a81d593d03aba6bf112b3923ede2d9c 118 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 112 1.4E-27 T 13-10-2018 IPR006504 Transcriptional regulator Spx/MgsR BEN78_00495 9a81d593d03aba6bf112b3923ede2d9c 118 SUPERFAMILY SSF52833 1 114 6.12E-32 T 13-10-2018 IPR036249 Thioredoxin-like superfamily BEN78_00495 9a81d593d03aba6bf112b3923ede2d9c 118 Pfam PF03960 ArsC family 5 112 4.0E-14 T 13-10-2018 IPR006660 Arsenate reductase-like BEN78_00495 9a81d593d03aba6bf112b3923ede2d9c 118 Gene3D G3DSA:3.40.30.10 1 115 2.6E-35 T 13-10-2018 BEN78_07405 ea17167624ff0d57d5948e1c64f4954d 236 SUPERFAMILY SSF52218 4 220 4.68E-39 T 13-10-2018 IPR029039 Flavoprotein-like superfamily BEN78_07405 ea17167624ff0d57d5948e1c64f4954d 236 Gene3D G3DSA:3.40.50.360 1 219 2.7E-45 T 13-10-2018 IPR029039 Flavoprotein-like superfamily BEN78_07405 ea17167624ff0d57d5948e1c64f4954d 236 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 217 23.803 T 13-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 BEN78_07405 ea17167624ff0d57d5948e1c64f4954d 236 Pfam PF02525 Flavodoxin-like fold 20 212 2.7E-30 T 13-10-2018 IPR003680 Flavodoxin-like fold BEN78_09880 7a13e675d4879fddb0544db05dbab6d4 127 SUPERFAMILY SSF55298 1 126 5.34E-46 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BEN78_09880 7a13e675d4879fddb0544db05dbab6d4 127 Gene3D G3DSA:3.30.1330.40 1 127 8.2E-51 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BEN78_09880 7a13e675d4879fddb0544db05dbab6d4 127 Pfam PF01042 Endoribonuclease L-PSP 9 125 2.0E-42 T 13-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 BEN78_09880 7a13e675d4879fddb0544db05dbab6d4 127 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 4 125 3.1E-50 T 13-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 BEN78_03570 885ac112b74181fdcde99bddaa863d3d 526 Pfam PF03806 AbgT putative transporter family 17 523 1.6E-187 T 13-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 BEN78_01650 ef474f293c3e309d2d7e31c8dcb9e043 444 SUPERFAMILY SSF52540 190 435 9.0E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_01650 ef474f293c3e309d2d7e31c8dcb9e043 444 SMART SM00382 237 415 9.5E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_01650 ef474f293c3e309d2d7e31c8dcb9e043 444 SMART SM00963 144 223 2.8E-18 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BEN78_01650 ef474f293c3e309d2d7e31c8dcb9e043 444 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 166 437 1.5E-99 T 13-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 BEN78_01650 ef474f293c3e309d2d7e31c8dcb9e043 444 Gene3D G3DSA:1.20.120.140 162 437 1.4E-104 T 13-10-2018 BEN78_01650 ef474f293c3e309d2d7e31c8dcb9e043 444 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 166 439 60.63 T 13-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 BEN78_01650 ef474f293c3e309d2d7e31c8dcb9e043 444 Gene3D G3DSA:3.40.50.300 238 427 1.4E-104 T 13-10-2018 BEN78_01650 ef474f293c3e309d2d7e31c8dcb9e043 444 Pfam PF02881 SRP54-type protein, helical bundle domain 155 216 6.9E-11 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BEN78_01650 ef474f293c3e309d2d7e31c8dcb9e043 444 SMART SM00962 238 439 6.0E-107 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BEN78_01650 ef474f293c3e309d2d7e31c8dcb9e043 444 Pfam PF00448 SRP54-type protein, GTPase domain 238 438 1.2E-72 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BEN78_01650 ef474f293c3e309d2d7e31c8dcb9e043 444 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 412 425 - T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BEN78_02830 5c338c6ec045dc5c9f0b16a959d7c0f3 212 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 23 195 1.0E-74 T 13-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal BEN78_02830 5c338c6ec045dc5c9f0b16a959d7c0f3 212 TIGRFAM TIGR02161 napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 11 196 6.4E-99 T 13-10-2018 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT GO:0016021|GO:0019333|GO:0020037 BEN78_02830 5c338c6ec045dc5c9f0b16a959d7c0f3 212 PIRSF PIRSF000013 1 205 2.6E-107 T 13-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 BEN78_02830 5c338c6ec045dc5c9f0b16a959d7c0f3 212 SUPERFAMILY SSF48695 18 199 8.82E-64 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily BEN78_02830 5c338c6ec045dc5c9f0b16a959d7c0f3 212 Gene3D G3DSA:1.10.3820.10 22 200 4.7E-37 T 13-10-2018 IPR038266 NapC/NirT cytochrome c superfamily BEN78_00310 59ec1991b00b86f6b417baf6b80ef094 231 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 19 228 8.0E-58 T 13-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 BEN78_00310 59ec1991b00b86f6b417baf6b80ef094 231 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 17 231 33.717 T 13-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 BEN78_00310 59ec1991b00b86f6b417baf6b80ef094 231 Gene3D G3DSA:3.40.50.150 12 230 4.0E-67 T 13-10-2018 BEN78_00310 59ec1991b00b86f6b417baf6b80ef094 231 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 36 227 9.3E-52 T 13-10-2018 BEN78_00310 59ec1991b00b86f6b417baf6b80ef094 231 SUPERFAMILY SSF53335 27 228 1.55E-41 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_00310 59ec1991b00b86f6b417baf6b80ef094 231 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 151 166 - T 13-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 BEN78_09915 973415fe2cfef9a9e623bd58709bc82b 83 PRINTS PR01249 Ribosomal protein L31 signature 2 19 3.3E-11 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_09915 973415fe2cfef9a9e623bd58709bc82b 83 PRINTS PR01249 Ribosomal protein L31 signature 62 80 3.3E-11 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_09915 973415fe2cfef9a9e623bd58709bc82b 83 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 83 25.686 T 13-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_09915 973415fe2cfef9a9e623bd58709bc82b 83 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 82 1.5E-21 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_09915 973415fe2cfef9a9e623bd58709bc82b 83 SUPERFAMILY SSF143800 1 81 4.32E-23 T 13-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_09915 973415fe2cfef9a9e623bd58709bc82b 83 Gene3D G3DSA:2.30.170.50 1 83 1.4E-25 T 13-10-2018 BEN78_09915 973415fe2cfef9a9e623bd58709bc82b 83 Pfam PF01197 Ribosomal protein L31 1 81 1.5E-30 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_09915 973415fe2cfef9a9e623bd58709bc82b 83 ProSitePatterns PS01143 Ribosomal protein L31 signature. 51 72 - T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_15215 d6b7065baf9f08c0be7d26d2359fc9aa 1346 Gene3D G3DSA:3.40.50.150 455 639 1.4E-24 T 13-10-2018 BEN78_15215 d6b7065baf9f08c0be7d26d2359fc9aa 1346 SUPERFAMILY SSF53335 291 1016 2.78E-61 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_15215 d6b7065baf9f08c0be7d26d2359fc9aa 1346 Pfam PF02384 N-6 DNA Methylase 465 590 6.5E-8 T 13-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 BEN78_15215 d6b7065baf9f08c0be7d26d2359fc9aa 1346 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 473 489 9.7E-12 T 13-10-2018 BEN78_15215 d6b7065baf9f08c0be7d26d2359fc9aa 1346 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 514 528 9.7E-12 T 13-10-2018 BEN78_15215 d6b7065baf9f08c0be7d26d2359fc9aa 1346 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 781 793 9.7E-12 T 13-10-2018 BEN78_14550 9aafa945e9a0334550d2c8c2a1e30f6d 131 Pfam PF00072 Response regulator receiver domain 6 117 4.9E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_14550 9aafa945e9a0334550d2c8c2a1e30f6d 131 SUPERFAMILY SSF52172 1 120 1.15E-28 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_14550 9aafa945e9a0334550d2c8c2a1e30f6d 131 Gene3D G3DSA:3.40.50.2300 1 126 1.1E-29 T 13-10-2018 BEN78_14550 9aafa945e9a0334550d2c8c2a1e30f6d 131 SMART SM00448 4 117 2.3E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_01120 a1613693bfc3d4dd6aa92e838508abf3 344 Gene3D G3DSA:3.30.250.10 270 343 1.8E-25 T 13-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal BEN78_01120 a1613693bfc3d4dd6aa92e838508abf3 344 Gene3D G3DSA:3.40.50.300 26 269 2.9E-79 T 13-10-2018 BEN78_01120 a1613693bfc3d4dd6aa92e838508abf3 344 SUPERFAMILY SSF52540 4 269 5.56E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_01120 a1613693bfc3d4dd6aa92e838508abf3 344 SUPERFAMILY SSF54752 270 327 2.88E-20 T 13-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal BEN78_01120 a1613693bfc3d4dd6aa92e838508abf3 344 ProSitePatterns PS00321 recA signature. 215 223 - T 13-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 BEN78_01120 a1613693bfc3d4dd6aa92e838508abf3 344 Hamap MF_00268 Protein RecA [recA]. 5 331 50.036 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BEN78_01120 a1613693bfc3d4dd6aa92e838508abf3 344 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 326 9.2E-164 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BEN78_01120 a1613693bfc3d4dd6aa92e838508abf3 344 Pfam PF00154 recA bacterial DNA recombination protein 7 270 1.1E-138 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BEN78_01120 a1613693bfc3d4dd6aa92e838508abf3 344 PRINTS PR00142 RecA protein signature 127 156 3.2E-86 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BEN78_01120 a1613693bfc3d4dd6aa92e838508abf3 344 PRINTS PR00142 RecA protein signature 212 240 3.2E-86 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BEN78_01120 a1613693bfc3d4dd6aa92e838508abf3 344 PRINTS PR00142 RecA protein signature 245 274 3.2E-86 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BEN78_01120 a1613693bfc3d4dd6aa92e838508abf3 344 PRINTS PR00142 RecA protein signature 93 122 3.2E-86 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BEN78_01120 a1613693bfc3d4dd6aa92e838508abf3 344 PRINTS PR00142 RecA protein signature 299 316 3.2E-86 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BEN78_01120 a1613693bfc3d4dd6aa92e838508abf3 344 PRINTS PR00142 RecA protein signature 165 194 3.2E-86 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BEN78_01120 a1613693bfc3d4dd6aa92e838508abf3 344 SMART SM00382 57 230 2.3E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_10240 8ed97a3ed77c1b04f0d3d9f3c0f3a4bd 269 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 45 72 - T 13-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 BEN78_10240 8ed97a3ed77c1b04f0d3d9f3c0f3a4bd 269 Gene3D G3DSA:3.40.50.150 12 201 4.7E-64 T 13-10-2018 BEN78_10240 8ed97a3ed77c1b04f0d3d9f3c0f3a4bd 269 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 13 267 54.431 T 13-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 BEN78_10240 8ed97a3ed77c1b04f0d3d9f3c0f3a4bd 269 SMART SM00650 29 200 4.2E-77 T 13-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 BEN78_10240 8ed97a3ed77c1b04f0d3d9f3c0f3a4bd 269 Pfam PF00398 Ribosomal RNA adenine dimethylase 16 265 3.0E-63 T 13-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm BEN78_10240 8ed97a3ed77c1b04f0d3d9f3c0f3a4bd 269 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 15 265 5.0E-80 T 13-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 BEN78_10240 8ed97a3ed77c1b04f0d3d9f3c0f3a4bd 269 SUPERFAMILY SSF53335 21 266 2.3E-74 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_10240 8ed97a3ed77c1b04f0d3d9f3c0f3a4bd 269 Gene3D G3DSA:1.10.8.100 206 269 1.3E-24 T 13-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 BEN78_05800 269c17155345ad1ed7f8c35f7523613a 849 Pfam PF00246 Zinc carboxypeptidase 58 254 5.2E-15 T 13-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 BEN78_05800 269c17155345ad1ed7f8c35f7523613a 849 Gene3D G3DSA:3.40.630.10 45 325 2.8E-28 T 13-10-2018 BEN78_05800 269c17155345ad1ed7f8c35f7523613a 849 SUPERFAMILY SSF52317 607 837 2.12E-11 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN78_05800 269c17155345ad1ed7f8c35f7523613a 849 SUPERFAMILY SSF53187 42 327 1.36E-46 T 13-10-2018 BEN78_14390 5d2b915064029541177d2b7935349360 725 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 551 578 3.6E-58 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BEN78_14390 5d2b915064029541177d2b7935349360 725 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 474 503 3.6E-58 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BEN78_14390 5d2b915064029541177d2b7935349360 725 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 580 609 3.6E-58 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BEN78_14390 5d2b915064029541177d2b7935349360 725 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 628 657 3.6E-58 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BEN78_14390 5d2b915064029541177d2b7935349360 725 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 191 216 3.6E-58 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BEN78_14390 5d2b915064029541177d2b7935349360 725 SUPERFAMILY SSF58104 420 701 8.11E-70 T 13-10-2018 BEN78_14390 5d2b915064029541177d2b7935349360 725 Gene3D G3DSA:3.30.450.20 43 195 1.9E-47 T 13-10-2018 BEN78_14390 5d2b915064029541177d2b7935349360 725 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 512 667 9.1E-52 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BEN78_14390 5d2b915064029541177d2b7935349360 725 SMART SM00304 220 272 3.5E-6 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BEN78_14390 5d2b915064029541177d2b7935349360 725 SMART SM00304 354 407 3.7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BEN78_14390 5d2b915064029541177d2b7935349360 725 SUPERFAMILY SSF158472 220 269 7.19E-8 T 13-10-2018 BEN78_14390 5d2b915064029541177d2b7935349360 725 Gene3D G3DSA:1.10.287.950 401 702 7.4E-83 T 13-10-2018 BEN78_14390 5d2b915064029541177d2b7935349360 725 Gene3D G3DSA:1.20.120.1530 212 357 9.1E-22 T 13-10-2018 BEN78_14390 5d2b915064029541177d2b7935349360 725 SMART SM01049 43 138 6.3E-32 T 13-10-2018 IPR033480 Single Cache domain 2 BEN78_14390 5d2b915064029541177d2b7935349360 725 SMART SM00283 453 700 9.2E-89 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BEN78_14390 5d2b915064029541177d2b7935349360 725 Pfam PF17200 Single Cache domain 2 46 195 6.4E-40 T 13-10-2018 IPR033480 Single Cache domain 2 BEN78_15580 debcee52b31b9dac3b0331f0af768934 595 Gene3D G3DSA:1.20.58.100 435 546 2.4E-40 T 13-10-2018 BEN78_15580 debcee52b31b9dac3b0331f0af768934 595 Pfam PF00890 FAD binding domain 12 407 1.8E-122 T 13-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 BEN78_15580 debcee52b31b9dac3b0331f0af768934 595 Gene3D G3DSA:3.50.50.60 12 418 1.7E-167 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_15580 debcee52b31b9dac3b0331f0af768934 595 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 9 595 6.0E-294 T 13-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 BEN78_15580 debcee52b31b9dac3b0331f0af768934 595 Gene3D G3DSA:4.10.80.40 547 595 1.8E-13 T 13-10-2018 BEN78_15580 debcee52b31b9dac3b0331f0af768934 595 Pfam PF02910 Fumarate reductase flavoprotein C-term 462 595 5.1E-45 T 13-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BEN78_15580 debcee52b31b9dac3b0331f0af768934 595 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 46 55 - T 13-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BEN78_15580 debcee52b31b9dac3b0331f0af768934 595 SUPERFAMILY SSF56425 239 357 4.19E-42 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 BEN78_15580 debcee52b31b9dac3b0331f0af768934 595 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 12 595 3.5E-245 T 13-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BEN78_15580 debcee52b31b9dac3b0331f0af768934 595 PIRSF PIRSF000171 1 585 8.2E-40 T 13-10-2018 BEN78_15580 debcee52b31b9dac3b0331f0af768934 595 SUPERFAMILY SSF51905 3 434 1.03E-79 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_15580 debcee52b31b9dac3b0331f0af768934 595 SUPERFAMILY SSF46977 454 595 1.31E-50 T 13-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BEN78_15580 debcee52b31b9dac3b0331f0af768934 595 Gene3D G3DSA:3.90.700.10 249 352 1.7E-167 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 BEN78_15835 b13da77e4922671122257ac2541e2fbe 112 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 13-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 BEN78_15835 b13da77e4922671122257ac2541e2fbe 112 Gene3D G3DSA:2.60.300.12 2 107 3.1E-33 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 BEN78_15835 b13da77e4922671122257ac2541e2fbe 112 SUPERFAMILY SSF89360 1 95 5.49E-25 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 BEN78_15835 b13da77e4922671122257ac2541e2fbe 112 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 2.0E-17 T 13-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 BEN78_15835 b13da77e4922671122257ac2541e2fbe 112 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 106 5.4E-32 T 13-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 BEN78_10770 026c2dfa95d3ffc5915b4dd3fb8978c0 151 Gene3D G3DSA:3.10.50.40 3 149 3.1E-44 T 13-10-2018 BEN78_10770 026c2dfa95d3ffc5915b4dd3fb8978c0 151 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 7 73 4.8E-11 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BEN78_10770 026c2dfa95d3ffc5915b4dd3fb8978c0 151 SUPERFAMILY SSF54534 5 140 2.36E-29 T 13-10-2018 BEN78_10770 026c2dfa95d3ffc5915b4dd3fb8978c0 151 Gene3D G3DSA:2.40.10.330 71 121 3.1E-44 T 13-10-2018 BEN78_09250 bd55fc5b1248ea021c9fe89adb20cb28 292 PIRSF PIRSF000770 3 292 2.7E-34 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN78_09250 bd55fc5b1248ea021c9fe89adb20cb28 292 Gene3D G3DSA:1.10.10.10 216 290 2.2E-15 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_09250 bd55fc5b1248ea021c9fe89adb20cb28 292 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 22 290 5.1E-125 T 13-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 BEN78_09250 bd55fc5b1248ea021c9fe89adb20cb28 292 SUPERFAMILY SSF88946 23 130 3.14E-40 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BEN78_09250 bd55fc5b1248ea021c9fe89adb20cb28 292 Gene3D G3DSA:1.10.601.10 21 133 6.3E-29 T 13-10-2018 BEN78_09250 bd55fc5b1248ea021c9fe89adb20cb28 292 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 56 287 2.3E-31 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BEN78_09250 bd55fc5b1248ea021c9fe89adb20cb28 292 SUPERFAMILY SSF88659 214 290 4.67E-17 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN78_09250 bd55fc5b1248ea021c9fe89adb20cb28 292 PRINTS PR00046 Major sigma-70 factor signature 240 252 2.0E-19 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN78_09250 bd55fc5b1248ea021c9fe89adb20cb28 292 PRINTS PR00046 Major sigma-70 factor signature 85 98 2.0E-19 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN78_09250 bd55fc5b1248ea021c9fe89adb20cb28 292 PRINTS PR00046 Major sigma-70 factor signature 260 275 2.0E-19 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN78_09250 bd55fc5b1248ea021c9fe89adb20cb28 292 PRINTS PR00046 Major sigma-70 factor signature 275 286 2.0E-19 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN78_09250 bd55fc5b1248ea021c9fe89adb20cb28 292 Pfam PF04542 Sigma-70 region 2 61 130 1.3E-16 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BEN78_09250 bd55fc5b1248ea021c9fe89adb20cb28 292 Pfam PF00140 Sigma-70 factor, region 1.2 23 54 6.0E-6 T 13-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BEN78_09250 bd55fc5b1248ea021c9fe89adb20cb28 292 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 85 98 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN78_09250 bd55fc5b1248ea021c9fe89adb20cb28 292 Pfam PF04545 Sigma-70, region 4 237 287 6.0E-15 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 BEN78_09250 bd55fc5b1248ea021c9fe89adb20cb28 292 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 260 286 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN78_09250 bd55fc5b1248ea021c9fe89adb20cb28 292 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 9 292 53.389 T 13-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 BEN78_12035 cb5cf04a9ca167856aa79c9e99fc1de4 466 Gene3D G3DSA:3.40.50.300 253 465 1.4E-65 T 13-10-2018 BEN78_12035 cb5cf04a9ca167856aa79c9e99fc1de4 466 Pfam PF13638 PIN domain 8 159 3.7E-37 T 13-10-2018 IPR002716 PIN domain BEN78_12035 cb5cf04a9ca167856aa79c9e99fc1de4 466 SUPERFAMILY SSF52540 253 445 2.44E-29 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_12035 cb5cf04a9ca167856aa79c9e99fc1de4 466 Gene3D G3DSA:3.40.50.1010 1 161 4.5E-23 T 13-10-2018 BEN78_12035 cb5cf04a9ca167856aa79c9e99fc1de4 466 SUPERFAMILY SSF88723 7 158 1.57E-9 T 13-10-2018 IPR029060 PIN-like domain superfamily BEN78_12035 cb5cf04a9ca167856aa79c9e99fc1de4 466 Pfam PF02562 PhoH-like protein 254 456 1.3E-54 T 13-10-2018 IPR003714 PhoH-like protein GO:0005524 BEN78_12035 cb5cf04a9ca167856aa79c9e99fc1de4 466 SMART SM00670 6 146 1.7E-10 T 13-10-2018 IPR002716 PIN domain BEN78_12845 4ac3e73903c47e16933a5a0b4b00e7ef 503 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 444 494 5.6E-15 T 13-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication BEN78_12845 4ac3e73903c47e16933a5a0b4b00e7ef 503 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 369 418 1.8E-21 T 13-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication BEN78_12845 4ac3e73903c47e16933a5a0b4b00e7ef 503 Gene3D G3DSA:1.10.150.20 435 494 6.1E-18 T 13-10-2018 BEN78_12845 4ac3e73903c47e16933a5a0b4b00e7ef 503 Pfam PF00575 S1 RNA binding domain 135 199 1.2E-6 T 13-10-2018 IPR003029 S1 domain GO:0003676 BEN78_12845 4ac3e73903c47e16933a5a0b4b00e7ef 503 SUPERFAMILY SSF54814 205 282 3.86E-29 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 BEN78_12845 4ac3e73903c47e16933a5a0b4b00e7ef 503 Pfam PF08529 NusA N-terminal domain 4 128 2.1E-34 T 13-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 BEN78_12845 4ac3e73903c47e16933a5a0b4b00e7ef 503 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 414 29.069 T 13-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 BEN78_12845 4ac3e73903c47e16933a5a0b4b00e7ef 503 SMART SM00322 234 297 13.0 T 13-10-2018 IPR004087 K Homology domain GO:0003676 BEN78_12845 4ac3e73903c47e16933a5a0b4b00e7ef 503 SMART SM00322 305 368 0.012 T 13-10-2018 IPR004087 K Homology domain GO:0003676 BEN78_12845 4ac3e73903c47e16933a5a0b4b00e7ef 503 Gene3D G3DSA:3.30.300.20 282 351 2.7E-24 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta BEN78_12845 4ac3e73903c47e16933a5a0b4b00e7ef 503 Pfam PF14520 Helix-hairpin-helix domain 437 492 1.4E-4 T 13-10-2018 BEN78_12845 4ac3e73903c47e16933a5a0b4b00e7ef 503 Pfam PF14520 Helix-hairpin-helix domain 370 416 0.0011 T 13-10-2018 BEN78_12845 4ac3e73903c47e16933a5a0b4b00e7ef 503 SMART SM00316 137 204 3.6E-8 T 13-10-2018 IPR022967 RNA-binding domain, S1 BEN78_12845 4ac3e73903c47e16933a5a0b4b00e7ef 503 SUPERFAMILY SSF69705 1 130 4.05E-36 T 13-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 BEN78_12845 4ac3e73903c47e16933a5a0b4b00e7ef 503 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 347 8.0E-124 T 13-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 BEN78_12845 4ac3e73903c47e16933a5a0b4b00e7ef 503 Gene3D G3DSA:2.40.50.140 139 202 2.5E-20 T 13-10-2018 BEN78_12845 4ac3e73903c47e16933a5a0b4b00e7ef 503 Gene3D G3DSA:1.10.150.20 356 425 2.3E-27 T 13-10-2018 BEN78_12845 4ac3e73903c47e16933a5a0b4b00e7ef 503 SUPERFAMILY SSF47794 360 420 2.67E-16 T 13-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 BEN78_12845 4ac3e73903c47e16933a5a0b4b00e7ef 503 Pfam PF13184 NusA-like KH domain 234 301 3.1E-27 T 13-10-2018 IPR025249 KH domain, NusA-like GO:0003723 BEN78_12845 4ac3e73903c47e16933a5a0b4b00e7ef 503 SUPERFAMILY SSF50249 135 203 3.9E-19 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN78_12845 4ac3e73903c47e16933a5a0b4b00e7ef 503 Gene3D G3DSA:3.30.300.20 203 281 5.1E-30 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta BEN78_12845 4ac3e73903c47e16933a5a0b4b00e7ef 503 Gene3D G3DSA:3.30.1480.10 1 133 3.7E-39 T 13-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 BEN78_12845 4ac3e73903c47e16933a5a0b4b00e7ef 503 SUPERFAMILY SSF47794 428 493 2.98E-9 T 13-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 BEN78_12845 4ac3e73903c47e16933a5a0b4b00e7ef 503 SUPERFAMILY SSF54814 283 346 5.69E-15 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 BEN78_12580 e2ff76b298c8d8b2ce84fe96ea9461b1 943 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 171 9.4E-21 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_12580 e2ff76b298c8d8b2ce84fe96ea9461b1 943 Pfam PF00593 TonB dependent receptor 346 939 3.6E-30 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_12580 e2ff76b298c8d8b2ce84fe96ea9461b1 943 Gene3D G3DSA:2.170.130.10 35 175 1.1E-30 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_12580 e2ff76b298c8d8b2ce84fe96ea9461b1 943 SUPERFAMILY SSF56935 40 941 6.59E-83 T 13-10-2018 BEN78_07590 91070e7bc0c100ee528d76e06ca72b25 336 Pfam PF00034 Cytochrome c 201 313 2.1E-8 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_07590 91070e7bc0c100ee528d76e06ca72b25 336 Gene3D G3DSA:1.10.760.10 179 316 4.2E-111 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BEN78_07590 91070e7bc0c100ee528d76e06ca72b25 336 SUPERFAMILY SSF46626 179 333 6.8E-43 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BEN78_07590 91070e7bc0c100ee528d76e06ca72b25 336 PIRSF PIRSF000294 3 336 5.5E-143 T 13-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 BEN78_07590 91070e7bc0c100ee528d76e06ca72b25 336 Gene3D G3DSA:1.10.760.10 40 318 4.2E-111 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BEN78_07590 91070e7bc0c100ee528d76e06ca72b25 336 SUPERFAMILY SSF46626 31 180 4.04E-50 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BEN78_07590 91070e7bc0c100ee528d76e06ca72b25 336 Pfam PF03150 Di-haem cytochrome c peroxidase 43 192 3.3E-50 T 13-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 BEN78_05335 f9ad1f599386d51fa313b4ecc222f733 670 Gene3D G3DSA:1.20.144.10 352 447 1.2E-12 T 13-10-2018 BEN78_05335 f9ad1f599386d51fa313b4ecc222f733 670 Pfam PF01569 PAP2 superfamily 357 433 1.0E-9 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BEN78_05335 f9ad1f599386d51fa313b4ecc222f733 670 Pfam PF14067 LssY C-terminus 496 605 2.9E-8 T 13-10-2018 IPR025902 LssY-like C-terminal domain BEN78_05335 f9ad1f599386d51fa313b4ecc222f733 670 Pfam PF09335 SNARE associated Golgi protein 40 163 1.2E-14 T 13-10-2018 IPR032816 SNARE associated Golgi protein BEN78_05335 f9ad1f599386d51fa313b4ecc222f733 670 SUPERFAMILY SSF48317 250 442 8.76E-23 T 13-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily BEN78_01150 7afa652fed5aec5c17a4def9ab69a8c2 428 Gene3D G3DSA:3.30.390.10 1 127 5.5E-54 T 13-10-2018 IPR029017 Enolase-like, N-terminal BEN78_01150 7afa652fed5aec5c17a4def9ab69a8c2 428 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 423 2.4E-129 T 13-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BEN78_01150 7afa652fed5aec5c17a4def9ab69a8c2 428 SUPERFAMILY SSF51604 140 425 3.28E-125 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily BEN78_01150 7afa652fed5aec5c17a4def9ab69a8c2 428 Gene3D G3DSA:3.20.20.120 128 428 2.3E-131 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily BEN78_01150 7afa652fed5aec5c17a4def9ab69a8c2 428 SMART SM01193 4 134 5.1E-90 T 13-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BEN78_01150 7afa652fed5aec5c17a4def9ab69a8c2 428 PRINTS PR00148 Enolase signature 334 348 2.2E-43 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BEN78_01150 7afa652fed5aec5c17a4def9ab69a8c2 428 PRINTS PR00148 Enolase signature 363 380 2.2E-43 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BEN78_01150 7afa652fed5aec5c17a4def9ab69a8c2 428 PRINTS PR00148 Enolase signature 161 174 2.2E-43 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BEN78_01150 7afa652fed5aec5c17a4def9ab69a8c2 428 PRINTS PR00148 Enolase signature 37 51 2.2E-43 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BEN78_01150 7afa652fed5aec5c17a4def9ab69a8c2 428 PRINTS PR00148 Enolase signature 311 322 2.2E-43 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BEN78_01150 7afa652fed5aec5c17a4def9ab69a8c2 428 PRINTS PR00148 Enolase signature 107 123 2.2E-43 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BEN78_01150 7afa652fed5aec5c17a4def9ab69a8c2 428 ProSitePatterns PS00164 Enolase signature. 334 347 - T 13-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_01150 7afa652fed5aec5c17a4def9ab69a8c2 428 Hamap MF_00318 Enolase [eno]. 2 411 44.22 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BEN78_01150 7afa652fed5aec5c17a4def9ab69a8c2 428 PIRSF PIRSF001400 1 425 2.8E-183 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BEN78_01150 7afa652fed5aec5c17a4def9ab69a8c2 428 Pfam PF03952 Enolase, N-terminal domain 4 134 5.4E-57 T 13-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BEN78_01150 7afa652fed5aec5c17a4def9ab69a8c2 428 SMART SM01192 139 425 3.7E-215 T 13-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BEN78_01150 7afa652fed5aec5c17a4def9ab69a8c2 428 SUPERFAMILY SSF54826 3 136 2.23E-54 T 13-10-2018 BEN78_01150 7afa652fed5aec5c17a4def9ab69a8c2 428 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 424 5.1E-200 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BEN78_02020 021850e34ac73d9aa7bfbce3dd4142dc 161 Gene3D G3DSA:3.40.390.30 7 159 1.0E-49 T 13-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 BEN78_02020 021850e34ac73d9aa7bfbce3dd4142dc 161 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 7 155 23.609 T 13-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 BEN78_02020 021850e34ac73d9aa7bfbce3dd4142dc 161 Pfam PF02130 Uncharacterized protein family UPF0054 25 150 1.6E-34 T 13-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 BEN78_02020 021850e34ac73d9aa7bfbce3dd4142dc 161 SUPERFAMILY SSF55486 24 157 3.91E-44 T 13-10-2018 BEN78_02020 021850e34ac73d9aa7bfbce3dd4142dc 161 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 43 152 4.6E-36 T 13-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 BEN78_02020 021850e34ac73d9aa7bfbce3dd4142dc 161 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 121 131 - T 13-10-2018 IPR020549 Endoribonuclease YbeY, conserved site BEN78_09420 9d14a6d9af8525db253a785a3cf88b6b 394 SUPERFAMILY SSF54675 2 137 2.94E-45 T 13-10-2018 BEN78_09420 9d14a6d9af8525db253a785a3cf88b6b 394 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 3 388 1.0E-141 T 13-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 BEN78_09420 9d14a6d9af8525db253a785a3cf88b6b 394 PIRSF PIRSF000484 1 382 2.8E-68 T 13-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 BEN78_09420 9d14a6d9af8525db253a785a3cf88b6b 394 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 1 391 47.855 T 13-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 BEN78_09420 9d14a6d9af8525db253a785a3cf88b6b 394 SUPERFAMILY SSF51690 119 388 1.3E-89 T 13-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 BEN78_09420 9d14a6d9af8525db253a785a3cf88b6b 394 Gene3D G3DSA:3.20.140.10 1 394 2.4E-150 T 13-10-2018 BEN78_09420 9d14a6d9af8525db253a785a3cf88b6b 394 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 164 389 4.3E-77 T 13-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 BEN78_10355 192335076ed723098eb02fba7287c6d7 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 7.4E-97 T 13-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 BEN78_10355 192335076ed723098eb02fba7287c6d7 187 Gene3D G3DSA:3.40.30.10 1 186 1.0E-59 T 13-10-2018 BEN78_10355 192335076ed723098eb02fba7287c6d7 187 Pfam PF00578 AhpC/TSA family 7 132 4.1E-31 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BEN78_10355 192335076ed723098eb02fba7287c6d7 187 SUPERFAMILY SSF52833 3 186 4.05E-53 T 13-10-2018 IPR036249 Thioredoxin-like superfamily BEN78_10355 192335076ed723098eb02fba7287c6d7 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 181 8.6E-7 T 13-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BEN78_10355 192335076ed723098eb02fba7287c6d7 187 PIRSF PIRSF000239 1 187 1.6E-45 T 13-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BEN78_14885 cff3a5f4060c97c24accca0ad32f05aa 168 Gene3D G3DSA:3.40.140.10 9 167 6.4E-57 T 13-10-2018 BEN78_14885 cff3a5f4060c97c24accca0ad32f05aa 168 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 20 163 46.927 T 13-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 BEN78_14885 cff3a5f4060c97c24accca0ad32f05aa 168 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 67 104 - T 13-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 BEN78_14885 cff3a5f4060c97c24accca0ad32f05aa 168 SUPERFAMILY SSF53927 14 163 1.05E-53 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 BEN78_14885 cff3a5f4060c97c24accca0ad32f05aa 168 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 16 115 1.4E-27 T 13-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain BEN78_15025 afecf6cc0d522de1e03e3d8007499946 535 SUPERFAMILY SSF52096 237 517 2.87E-87 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BEN78_15025 afecf6cc0d522de1e03e3d8007499946 535 Gene3D G3DSA:3.90.226.10 1 272 1.6E-98 T 13-10-2018 BEN78_15025 afecf6cc0d522de1e03e3d8007499946 535 SUPERFAMILY SSF52096 22 270 5.97E-71 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BEN78_15025 afecf6cc0d522de1e03e3d8007499946 535 Gene3D G3DSA:3.90.226.10 274 535 4.0E-104 T 13-10-2018 BEN78_15025 afecf6cc0d522de1e03e3d8007499946 535 Pfam PF01039 Carboxyl transferase domain 47 525 1.5E-150 T 13-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 BEN78_01355 554c9d83104a7c9345a1632e53ee5b26 726 SUPERFAMILY SSF51126 21 459 1.03E-88 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor BEN78_01355 554c9d83104a7c9345a1632e53ee5b26 726 Pfam PF14592 Chondroitinase B 25 417 6.1E-113 T 13-10-2018 IPR039513 PL-6 family BEN78_01355 554c9d83104a7c9345a1632e53ee5b26 726 Gene3D G3DSA:2.160.20.10 20 461 5.4E-121 T 13-10-2018 IPR012334 Pectin lyase fold BEN78_01355 554c9d83104a7c9345a1632e53ee5b26 726 SUPERFAMILY SSF51126 463 709 2.51E-18 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor BEN78_02605 5135de675c6ca1bf87c3ffaaafb7dd72 185 SUPERFAMILY SSF50475 2 171 1.91E-36 T 13-10-2018 BEN78_02605 5135de675c6ca1bf87c3ffaaafb7dd72 185 Gene3D G3DSA:2.30.110.10 5 175 2.5E-42 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 BEN78_02605 5135de675c6ca1bf87c3ffaaafb7dd72 185 Pfam PF01613 Flavin reductase like domain 20 151 3.9E-18 T 13-10-2018 IPR002563 Flavin reductase like domain GO:0010181 BEN78_02605 5135de675c6ca1bf87c3ffaaafb7dd72 185 SMART SM00903 16 166 1.4E-10 T 13-10-2018 IPR002563 Flavin reductase like domain GO:0010181 BEN78_08125 79fec2d86f0c598607391ef24c1b2e54 240 Pfam PF08808 RES domain 73 217 2.3E-30 T 13-10-2018 IPR014914 RES domain BEN78_08125 79fec2d86f0c598607391ef24c1b2e54 240 SMART SM00953 85 209 1.1E-28 T 13-10-2018 IPR014914 RES domain BEN78_12555 5fe3dca9ba949c99de844b6a91701990 559 Pfam PF03109 ABC1 family 116 235 2.4E-32 T 13-10-2018 IPR004147 UbiB domain BEN78_12555 5fe3dca9ba949c99de844b6a91701990 559 SUPERFAMILY SSF56112 99 436 2.16E-28 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily BEN78_07200 9918a9371fbf3f2e781fbc5e9f537fd3 326 SUPERFAMILY SSF53686 10 323 4.85E-77 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BEN78_07200 9918a9371fbf3f2e781fbc5e9f537fd3 326 Gene3D G3DSA:3.40.50.1100 56 152 8.3E-97 T 13-10-2018 BEN78_07200 9918a9371fbf3f2e781fbc5e9f537fd3 326 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 22 314 1.2E-67 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BEN78_07200 9918a9371fbf3f2e781fbc5e9f537fd3 326 Gene3D G3DSA:3.40.50.1100 19 318 8.3E-97 T 13-10-2018 BEN78_12525 5744a024c79539eab7fb20c0a8285598 208 Pfam PF13417 Glutathione S-transferase, N-terminal domain 15 81 3.4E-14 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 BEN78_12525 5744a024c79539eab7fb20c0a8285598 208 SUPERFAMILY SSF47616 83 196 7.8E-16 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BEN78_12525 5744a024c79539eab7fb20c0a8285598 208 Pfam PF00043 Glutathione S-transferase, C-terminal domain 134 173 2.0E-4 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal BEN78_12525 5744a024c79539eab7fb20c0a8285598 208 Gene3D G3DSA:3.40.30.10 7 191 3.2E-44 T 13-10-2018 BEN78_12525 5744a024c79539eab7fb20c0a8285598 208 Gene3D G3DSA:1.20.1050.10 83 187 3.2E-44 T 13-10-2018 BEN78_12525 5744a024c79539eab7fb20c0a8285598 208 SUPERFAMILY SSF52833 4 85 3.62E-22 T 13-10-2018 IPR036249 Thioredoxin-like superfamily BEN78_10375 1b3b3f55aa30619a9fbc58c07771e3a3 76 Pfam PF03831 PhnA domain 9 76 8.4E-30 T 13-10-2018 IPR013988 PhnA protein, C-terminal BEN78_10375 1b3b3f55aa30619a9fbc58c07771e3a3 76 Gene3D G3DSA:2.30.30.40 6 76 1.6E-32 T 13-10-2018 BEN78_10375 1b3b3f55aa30619a9fbc58c07771e3a3 76 SUPERFAMILY SSF82057 3 76 2.15E-26 T 13-10-2018 BEN78_15530 356e44037168a6495b4e79379bb211ce 511 SUPERFAMILY SSF53720 16 499 1.18E-135 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BEN78_15530 356e44037168a6495b4e79379bb211ce 511 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 263 270 - T 13-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 BEN78_15530 356e44037168a6495b4e79379bb211ce 511 Pfam PF00171 Aldehyde dehydrogenase family 27 492 2.0E-132 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BEN78_15530 356e44037168a6495b4e79379bb211ce 511 Gene3D G3DSA:3.40.605.10 34 487 6.2E-148 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BEN78_15530 356e44037168a6495b4e79379bb211ce 511 Gene3D G3DSA:3.40.309.10 267 462 6.2E-148 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BEN78_11140 7cb1ef29b0495c0dc9e06141eb205f98 105 SUPERFAMILY SSF50104 3 99 1.23E-29 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily BEN78_11140 7cb1ef29b0495c0dc9e06141eb205f98 105 Pfam PF00467 KOW motif 7 35 7.2E-5 T 13-10-2018 IPR005824 KOW BEN78_11140 7cb1ef29b0495c0dc9e06141eb205f98 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 20.041 T 13-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_11140 7cb1ef29b0495c0dc9e06141eb205f98 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 13-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_11140 7cb1ef29b0495c0dc9e06141eb205f98 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 102 7.3E-35 T 13-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_11140 7cb1ef29b0495c0dc9e06141eb205f98 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 102 1.4E-23 T 13-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_11140 7cb1ef29b0495c0dc9e06141eb205f98 105 Gene3D G3DSA:2.30.30.30 2 104 8.6E-35 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 BEN78_11140 7cb1ef29b0495c0dc9e06141eb205f98 105 SMART SM00739 4 31 6.0E-4 T 13-10-2018 IPR005824 KOW BEN78_09685 97e1e4ca3434b2d2df8a8ea6584ba732 2215 Pfam PF12951 Passenger-associated-transport-repeat 426 454 5.1E-4 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09685 97e1e4ca3434b2d2df8a8ea6584ba732 2215 Pfam PF12951 Passenger-associated-transport-repeat 521 548 1.1E-8 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09685 97e1e4ca3434b2d2df8a8ea6584ba732 2215 Pfam PF12951 Passenger-associated-transport-repeat 1570 1599 4.3E-8 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09685 97e1e4ca3434b2d2df8a8ea6584ba732 2215 Pfam PF12951 Passenger-associated-transport-repeat 1107 1135 4.0E-7 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09685 97e1e4ca3434b2d2df8a8ea6584ba732 2215 Pfam PF12951 Passenger-associated-transport-repeat 971 999 6.4E-7 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09685 97e1e4ca3434b2d2df8a8ea6584ba732 2215 Pfam PF12951 Passenger-associated-transport-repeat 1638 1667 4.4E-7 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09685 97e1e4ca3434b2d2df8a8ea6584ba732 2215 Pfam PF12951 Passenger-associated-transport-repeat 588 616 1.9E-6 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09685 97e1e4ca3434b2d2df8a8ea6584ba732 2215 Pfam PF12951 Passenger-associated-transport-repeat 1039 1067 1.0E-7 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09685 97e1e4ca3434b2d2df8a8ea6584ba732 2215 Pfam PF12951 Passenger-associated-transport-repeat 1413 1442 8.0E-8 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09685 97e1e4ca3434b2d2df8a8ea6584ba732 2215 Pfam PF12951 Passenger-associated-transport-repeat 1707 1734 0.025 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09685 97e1e4ca3434b2d2df8a8ea6584ba732 2215 Pfam PF12951 Passenger-associated-transport-repeat 902 931 3.1E-10 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09685 97e1e4ca3434b2d2df8a8ea6584ba732 2215 Pfam PF12951 Passenger-associated-transport-repeat 1502 1531 6.3E-10 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09685 97e1e4ca3434b2d2df8a8ea6584ba732 2215 Gene3D G3DSA:2.160.20.20 1728 1897 8.1E-37 T 13-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily BEN78_09685 97e1e4ca3434b2d2df8a8ea6584ba732 2215 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1412 1442 3.4E-9 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09685 97e1e4ca3434b2d2df8a8ea6584ba732 2215 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 519 549 7.0E-10 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09685 97e1e4ca3434b2d2df8a8ea6584ba732 2215 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 586 617 4.9E-8 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09685 97e1e4ca3434b2d2df8a8ea6584ba732 2215 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 901 932 1.1E-11 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09685 97e1e4ca3434b2d2df8a8ea6584ba732 2215 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1501 1532 2.6E-10 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09685 97e1e4ca3434b2d2df8a8ea6584ba732 2215 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1105 1136 2.2E-9 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09685 97e1e4ca3434b2d2df8a8ea6584ba732 2215 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1570 1600 1.1E-9 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09685 97e1e4ca3434b2d2df8a8ea6584ba732 2215 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1038 1068 2.6E-9 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09685 97e1e4ca3434b2d2df8a8ea6584ba732 2215 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1638 1668 2.1E-9 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09685 97e1e4ca3434b2d2df8a8ea6584ba732 2215 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1706 1735 5.2E-6 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09685 97e1e4ca3434b2d2df8a8ea6584ba732 2215 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 970 1000 9.6E-9 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_09685 97e1e4ca3434b2d2df8a8ea6584ba732 2215 SUPERFAMILY SSF51126 1545 1895 6.28E-44 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor BEN78_09685 97e1e4ca3434b2d2df8a8ea6584ba732 2215 SUPERFAMILY SSF51126 424 710 1.26E-19 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor BEN78_09685 97e1e4ca3434b2d2df8a8ea6584ba732 2215 Gene3D G3DSA:2.40.128.130 1898 2215 1.8E-58 T 13-10-2018 IPR036709 Autotransporter beta-domain superfamily BEN78_09685 97e1e4ca3434b2d2df8a8ea6584ba732 2215 SUPERFAMILY SSF51126 1223 1462 1.98E-5 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor BEN78_09685 97e1e4ca3434b2d2df8a8ea6584ba732 2215 SUPERFAMILY SSF103515 1918 2215 2.35E-37 T 13-10-2018 IPR036709 Autotransporter beta-domain superfamily BEN78_09685 97e1e4ca3434b2d2df8a8ea6584ba732 2215 SUPERFAMILY SSF51126 945 1230 3.45E-25 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor BEN78_09685 97e1e4ca3434b2d2df8a8ea6584ba732 2215 SMART SM00869 1940 2199 2.1E-29 T 13-10-2018 IPR005546 Autotransporter beta-domain BEN78_09685 97e1e4ca3434b2d2df8a8ea6584ba732 2215 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 1779 2215 1.3E-55 T 13-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 BEN78_09685 97e1e4ca3434b2d2df8a8ea6584ba732 2215 SUPERFAMILY SSF51126 698 943 1.38E-8 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor BEN78_15795 b62a032064e00c99354257747b6fb743 76 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 3.9E-35 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_15795 b62a032064e00c99354257747b6fb743 76 SUPERFAMILY SSF46911 3 74 3.92E-27 T 13-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_15795 b62a032064e00c99354257747b6fb743 76 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 3.0E-21 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_15795 b62a032064e00c99354257747b6fb743 76 Pfam PF01084 Ribosomal protein S18 19 68 1.6E-22 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_15795 b62a032064e00c99354257747b6fb743 76 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 20.386 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_15795 b62a032064e00c99354257747b6fb743 76 Gene3D G3DSA:4.10.640.10 20 75 1.1E-24 T 13-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_15795 b62a032064e00c99354257747b6fb743 76 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 7.2E-16 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_15795 b62a032064e00c99354257747b6fb743 76 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 7.2E-16 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_15795 b62a032064e00c99354257747b6fb743 76 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 7.2E-16 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_15795 b62a032064e00c99354257747b6fb743 76 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 7.2E-16 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_00420 4ae5439d74d865c6c7c817e13b6f64e3 681 Gene3D G3DSA:3.30.870.10 315 497 2.0E-72 T 13-10-2018 BEN78_00420 4ae5439d74d865c6c7c817e13b6f64e3 681 PIRSF PIRSF015589 1 680 1.3E-261 T 13-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 BEN78_00420 4ae5439d74d865c6c7c817e13b6f64e3 681 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 676 1.9E-276 T 13-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 BEN78_00420 4ae5439d74d865c6c7c817e13b6f64e3 681 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 111 7.5E-29 T 13-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 BEN78_00420 4ae5439d74d865c6c7c817e13b6f64e3 681 SUPERFAMILY SSF56024 498 678 7.18E-69 T 13-10-2018 BEN78_00420 4ae5439d74d865c6c7c817e13b6f64e3 681 SUPERFAMILY SSF56024 314 489 1.6E-56 T 13-10-2018 BEN78_00420 4ae5439d74d865c6c7c817e13b6f64e3 681 SUPERFAMILY SSF140356 4 104 8.37E-33 T 13-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 BEN78_00420 4ae5439d74d865c6c7c817e13b6f64e3 681 SUPERFAMILY SSF143724 109 314 3.53E-63 T 13-10-2018 BEN78_00420 4ae5439d74d865c6c7c817e13b6f64e3 681 Gene3D G3DSA:3.30.870.10 498 679 1.1E-64 T 13-10-2018 BEN78_00420 4ae5439d74d865c6c7c817e13b6f64e3 681 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 681 27.549 T 13-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 BEN78_00420 4ae5439d74d865c6c7c817e13b6f64e3 681 Gene3D G3DSA:3.30.1840.10 3 313 2.2E-94 T 13-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 BEN78_00420 4ae5439d74d865c6c7c817e13b6f64e3 681 Pfam PF13090 Polyphosphate kinase C-terminal domain 328 675 4.3E-151 T 13-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 BEN78_00420 4ae5439d74d865c6c7c817e13b6f64e3 681 Pfam PF02503 Polyphosphate kinase middle domain 121 321 1.5E-58 T 13-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 BEN78_07380 dc7fbb4037defa7b077fafb125a33265 322 Gene3D G3DSA:3.20.20.70 1 321 2.0E-116 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_07380 dc7fbb4037defa7b077fafb125a33265 322 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 17 315 1.7E-86 T 13-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 BEN78_07380 dc7fbb4037defa7b077fafb125a33265 322 SUPERFAMILY SSF51569 6 319 2.2E-94 T 13-10-2018 BEN78_07380 dc7fbb4037defa7b077fafb125a33265 322 ProSitePatterns PS01054 Transaldolase signature 1. 34 42 - T 13-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 BEN78_07380 dc7fbb4037defa7b077fafb125a33265 322 ProSitePatterns PS00958 Transaldolase active site. 132 149 - T 13-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 BEN78_12880 dca5ee504dc3b77ef4c70f4a2b0a24fb 702 Pfam PF00005 ABC transporter 496 645 1.4E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_12880 dca5ee504dc3b77ef4c70f4a2b0a24fb 702 ProSitePatterns PS00211 ABC transporters family signature. 617 631 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN78_12880 dca5ee504dc3b77ef4c70f4a2b0a24fb 702 Gene3D G3DSA:3.90.70.10 3 143 7.5E-37 T 13-10-2018 BEN78_12880 dca5ee504dc3b77ef4c70f4a2b0a24fb 702 Pfam PF00664 ABC transporter transmembrane region 167 430 1.4E-33 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BEN78_12880 dca5ee504dc3b77ef4c70f4a2b0a24fb 702 Pfam PF03412 Peptidase C39 family 9 137 1.1E-33 T 13-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 BEN78_12880 dca5ee504dc3b77ef4c70f4a2b0a24fb 702 SUPERFAMILY SSF52540 476 694 1.7E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_12880 dca5ee504dc3b77ef4c70f4a2b0a24fb 702 Gene3D G3DSA:3.40.50.300 475 700 1.4E-75 T 13-10-2018 BEN78_12880 dca5ee504dc3b77ef4c70f4a2b0a24fb 702 SMART SM00382 505 689 5.8E-19 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_12880 dca5ee504dc3b77ef4c70f4a2b0a24fb 702 Gene3D G3DSA:1.20.1560.10 156 465 6.8E-56 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BEN78_12880 dca5ee504dc3b77ef4c70f4a2b0a24fb 702 SUPERFAMILY SSF90123 163 629 3.27E-53 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BEN78_08335 43f39b1510efd23281051fc5c19e020a 66 Pfam PF10276 Zinc-finger domain 38 62 8.4E-9 T 13-10-2018 IPR019401 Zinc finger, CHCC-type Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_08335 43f39b1510efd23281051fc5c19e020a 66 Gene3D G3DSA:2.60.260.40 10 64 2.7E-10 T 13-10-2018 BEN78_02675 a75949b4a4e76edc41eb1e4ef779623d 1479 SUPERFAMILY SSF52540 29 398 3.0E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_02675 a75949b4a4e76edc41eb1e4ef779623d 1479 Pfam PF08494 DEAD/H associated 664 866 4.1E-53 T 13-10-2018 IPR013701 DEAD/H associated GO:0005524|GO:0016818 BEN78_02675 a75949b4a4e76edc41eb1e4ef779623d 1479 SMART SM00487 17 231 7.6E-30 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN78_02675 a75949b4a4e76edc41eb1e4ef779623d 1479 Pfam PF00270 DEAD/DEAH box helicase 22 208 1.1E-26 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BEN78_02675 a75949b4a4e76edc41eb1e4ef779623d 1479 Pfam PF00271 Helicase conserved C-terminal domain 293 396 5.2E-17 T 13-10-2018 IPR001650 Helicase, C-terminal BEN78_02675 a75949b4a4e76edc41eb1e4ef779623d 1479 SMART SM00490 317 399 1.4E-18 T 13-10-2018 IPR001650 Helicase, C-terminal BEN78_02675 a75949b4a4e76edc41eb1e4ef779623d 1479 Gene3D G3DSA:3.40.50.300 279 419 3.4E-27 T 13-10-2018 BEN78_02675 a75949b4a4e76edc41eb1e4ef779623d 1479 Gene3D G3DSA:3.40.50.300 2 229 1.2E-55 T 13-10-2018 BEN78_09445 9eb5be843985bac8b63f9fedd643e684 554 SMART SM00382 349 527 1.4E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_09445 9eb5be843985bac8b63f9fedd643e684 554 SMART SM00382 32 237 3.1E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_09445 9eb5be843985bac8b63f9fedd643e684 554 SUPERFAMILY SSF52540 10 238 1.22E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_09445 9eb5be843985bac8b63f9fedd643e684 554 Gene3D G3DSA:3.40.50.300 2 286 1.7E-83 T 13-10-2018 BEN78_09445 9eb5be843985bac8b63f9fedd643e684 554 Pfam PF00005 ABC transporter 24 192 9.6E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_09445 9eb5be843985bac8b63f9fedd643e684 554 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 3 553 1.8E-288 T 13-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 BEN78_09445 9eb5be843985bac8b63f9fedd643e684 554 Gene3D G3DSA:3.40.50.300 287 548 4.0E-73 T 13-10-2018 BEN78_09445 9eb5be843985bac8b63f9fedd643e684 554 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN78_09445 9eb5be843985bac8b63f9fedd643e684 554 Pfam PF12848 ABC transporter 231 307 1.1E-10 T 13-10-2018 IPR032781 ABC-transporter extension domain BEN78_09445 9eb5be843985bac8b63f9fedd643e684 554 SUPERFAMILY SSF52540 303 523 3.89E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_09445 9eb5be843985bac8b63f9fedd643e684 554 Pfam PF00005 ABC transporter 341 474 1.3E-23 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_01865 e634b422edc26164ea8cc3e554250480 81 SUPERFAMILY SSF47336 4 77 1.03E-13 T 13-10-2018 IPR036736 ACP-like superfamily BEN78_01865 e634b422edc26164ea8cc3e554250480 81 Gene3D G3DSA:1.10.1200.10 2 77 3.1E-23 T 13-10-2018 IPR036736 ACP-like superfamily BEN78_01865 e634b422edc26164ea8cc3e554250480 81 Pfam PF00550 Phosphopantetheine attachment site 9 68 6.7E-10 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain BEN78_10305 9168d3fc12b85f8e90fbd6cc966ac2c9 365 SUPERFAMILY SSF53335 197 307 4.22E-16 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_10305 9168d3fc12b85f8e90fbd6cc966ac2c9 365 PIRSF PIRSF028774 17 365 5.0E-147 T 13-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 BEN78_10305 9168d3fc12b85f8e90fbd6cc966ac2c9 365 Gene3D G3DSA:3.30.70.2810 17 92 5.5E-22 T 13-10-2018 BEN78_10305 9168d3fc12b85f8e90fbd6cc966ac2c9 365 Gene3D G3DSA:3.30.2300.20 93 187 9.7E-28 T 13-10-2018 BEN78_10305 9168d3fc12b85f8e90fbd6cc966ac2c9 365 Pfam PF01728 FtsJ-like methyltransferase 198 258 7.9E-10 T 13-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 BEN78_10305 9168d3fc12b85f8e90fbd6cc966ac2c9 365 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 17 365 72.184 T 13-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 BEN78_10305 9168d3fc12b85f8e90fbd6cc966ac2c9 365 Gene3D G3DSA:3.40.50.150 188 364 3.2E-52 T 13-10-2018 BEN78_10270 e84b2b8d9a2aa584aa713b92af6576c5 183 SUPERFAMILY SSF89028 7 178 1.04E-59 T 13-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 BEN78_10270 e84b2b8d9a2aa584aa713b92af6576c5 183 Pfam PF01923 Cobalamin adenosyltransferase 8 166 3.2E-57 T 13-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 BEN78_10270 e84b2b8d9a2aa584aa713b92af6576c5 183 Gene3D G3DSA:1.20.1200.10 17 183 1.4E-60 T 13-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 BEN78_10270 e84b2b8d9a2aa584aa713b92af6576c5 183 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 28 177 1.0E-56 T 13-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 BEN78_10270 e84b2b8d9a2aa584aa713b92af6576c5 183 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 9 178 1.0E-57 T 13-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 BEN78_09580 4ee6d56fc059e939fe74027f0937f9c9 411 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 378 9.0E-162 T 13-10-2018 IPR020823 Cell division protein FtsA BEN78_09580 4ee6d56fc059e939fe74027f0937f9c9 411 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 7.1E-29 T 13-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 BEN78_09580 4ee6d56fc059e939fe74027f0937f9c9 411 Gene3D G3DSA:3.30.420.40 198 353 3.8E-121 T 13-10-2018 BEN78_09580 4ee6d56fc059e939fe74027f0937f9c9 411 Pfam PF14450 Cell division protein FtsA 11 188 5.8E-11 T 13-10-2018 BEN78_09580 4ee6d56fc059e939fe74027f0937f9c9 411 Gene3D G3DSA:3.30.1490.110 87 170 3.8E-121 T 13-10-2018 BEN78_09580 4ee6d56fc059e939fe74027f0937f9c9 411 PIRSF PIRSF003101 1 411 1.2E-150 T 13-10-2018 IPR020823 Cell division protein FtsA BEN78_09580 4ee6d56fc059e939fe74027f0937f9c9 411 SMART SM00842 10 197 3.6E-103 T 13-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 BEN78_09580 4ee6d56fc059e939fe74027f0937f9c9 411 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 411 30.761 T 13-10-2018 IPR020823 Cell division protein FtsA BEN78_09580 4ee6d56fc059e939fe74027f0937f9c9 411 Pfam PF14450 Cell division protein FtsA 208 375 1.5E-22 T 13-10-2018 BEN78_09580 4ee6d56fc059e939fe74027f0937f9c9 411 Gene3D G3DSA:3.30.420.40 13 371 3.8E-121 T 13-10-2018 BEN78_09580 4ee6d56fc059e939fe74027f0937f9c9 411 SUPERFAMILY SSF53067 200 378 4.34E-45 T 13-10-2018 BEN78_09580 4ee6d56fc059e939fe74027f0937f9c9 411 SUPERFAMILY SSF53067 9 198 1.68E-60 T 13-10-2018 BEN78_09580 4ee6d56fc059e939fe74027f0937f9c9 411 Gene3D G3DSA:3.90.640.10 236 301 3.8E-121 T 13-10-2018 BEN78_12660 fa546a0f247b8b2ebb5bc3b82454b519 372 TIGRFAM TIGR00033 aroC: chorismate synthase 10 355 2.0E-133 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BEN78_12660 fa546a0f247b8b2ebb5bc3b82454b519 372 PIRSF PIRSF001456 3 365 2.4E-131 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BEN78_12660 fa546a0f247b8b2ebb5bc3b82454b519 372 Hamap MF_00300 Chorismate synthase [aroC]. 10 359 34.686 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BEN78_12660 fa546a0f247b8b2ebb5bc3b82454b519 372 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 13-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BEN78_12660 fa546a0f247b8b2ebb5bc3b82454b519 372 SUPERFAMILY SSF103263 4 356 4.97E-138 T 13-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BEN78_12660 fa546a0f247b8b2ebb5bc3b82454b519 372 Pfam PF01264 Chorismate synthase 10 350 6.3E-131 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BEN78_12660 fa546a0f247b8b2ebb5bc3b82454b519 372 Gene3D G3DSA:3.60.150.10 1 364 9.6E-144 T 13-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BEN78_12660 fa546a0f247b8b2ebb5bc3b82454b519 372 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 13-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BEN78_12660 fa546a0f247b8b2ebb5bc3b82454b519 372 ProSitePatterns PS00789 Chorismate synthase signature 3. 324 340 - T 13-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BEN78_13055 c13ddd2fc2a28e6dce6197586bf9f59d 326 SMART SM00267 156 322 2.4E-55 T 13-10-2018 IPR000160 GGDEF domain BEN78_13055 c13ddd2fc2a28e6dce6197586bf9f59d 326 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 163 322 2.6E-41 T 13-10-2018 IPR000160 GGDEF domain BEN78_13055 c13ddd2fc2a28e6dce6197586bf9f59d 326 SUPERFAMILY SSF55073 172 321 8.63E-41 T 13-10-2018 IPR029787 Nucleotide cyclase BEN78_13055 c13ddd2fc2a28e6dce6197586bf9f59d 326 Gene3D G3DSA:3.30.70.270 153 324 3.8E-51 T 13-10-2018 BEN78_13055 c13ddd2fc2a28e6dce6197586bf9f59d 326 Pfam PF00990 Diguanylate cyclase, GGDEF domain 167 318 4.2E-40 T 13-10-2018 IPR000160 GGDEF domain BEN78_16690 936cfbd6f73aed94a4573ae560f32836 416 Gene3D G3DSA:3.40.309.10 224 372 1.3E-155 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BEN78_16690 936cfbd6f73aed94a4573ae560f32836 416 Pfam PF00171 Aldehyde dehydrogenase family 10 283 5.9E-13 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BEN78_16690 936cfbd6f73aed94a4573ae560f32836 416 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 3 414 40.418 T 13-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BEN78_16690 936cfbd6f73aed94a4573ae560f32836 416 Gene3D G3DSA:3.40.605.10 16 409 1.3E-155 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BEN78_16690 936cfbd6f73aed94a4573ae560f32836 416 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 12 401 3.5E-137 T 13-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BEN78_16690 936cfbd6f73aed94a4573ae560f32836 416 PIRSF PIRSF000151 1 415 3.7E-168 T 13-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 BEN78_16690 936cfbd6f73aed94a4573ae560f32836 416 SUPERFAMILY SSF53720 2 414 1.2E-107 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BEN78_00515 0b10cbaa5394adba90dc5a3880a8ef74 180 Pfam PF05229 Spore Coat Protein U domain 24 176 8.7E-28 T 13-10-2018 IPR007893 Spore coat protein U BEN78_00515 0b10cbaa5394adba90dc5a3880a8ef74 180 SMART SM00972 122 177 3.2E-15 T 13-10-2018 IPR007893 Spore coat protein U BEN78_06665 5c9de442035fba6c57dd60996f1ec03c 1056 Gene3D G3DSA:1.20.1640.10 10 522 0.0 T 13-10-2018 BEN78_06665 5c9de442035fba6c57dd60996f1ec03c 1056 SUPERFAMILY SSF82866 813 1037 9.94E-42 T 13-10-2018 BEN78_06665 5c9de442035fba6c57dd60996f1ec03c 1056 SUPERFAMILY SSF82693 41 134 2.59E-26 T 13-10-2018 BEN78_06665 5c9de442035fba6c57dd60996f1ec03c 1056 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1040 0.0 T 13-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 BEN78_06665 5c9de442035fba6c57dd60996f1ec03c 1056 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.8E-90 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_06665 5c9de442035fba6c57dd60996f1ec03c 1056 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 3.8E-90 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_06665 5c9de442035fba6c57dd60996f1ec03c 1056 PRINTS PR00702 Acriflavin resistance protein family signature 631 645 3.8E-90 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_06665 5c9de442035fba6c57dd60996f1ec03c 1056 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.8E-90 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_06665 5c9de442035fba6c57dd60996f1ec03c 1056 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 3.8E-90 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_06665 5c9de442035fba6c57dd60996f1ec03c 1056 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 3.8E-90 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_06665 5c9de442035fba6c57dd60996f1ec03c 1056 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 3.8E-90 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_06665 5c9de442035fba6c57dd60996f1ec03c 1056 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 3.8E-90 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_06665 5c9de442035fba6c57dd60996f1ec03c 1056 PRINTS PR00702 Acriflavin resistance protein family signature 562 579 3.8E-90 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_06665 5c9de442035fba6c57dd60996f1ec03c 1056 Gene3D G3DSA:3.30.2090.10 728 816 0.0 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN78_06665 5c9de442035fba6c57dd60996f1ec03c 1056 Gene3D G3DSA:3.30.2090.10 181 278 0.0 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN78_06665 5c9de442035fba6c57dd60996f1ec03c 1056 SUPERFAMILY SSF82693 575 678 2.88E-24 T 13-10-2018 BEN78_06665 5c9de442035fba6c57dd60996f1ec03c 1056 Pfam PF00873 AcrB/AcrD/AcrF family 3 1034 0.0 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_06665 5c9de442035fba6c57dd60996f1ec03c 1056 Gene3D G3DSA:3.30.70.1430 40 824 0.0 T 13-10-2018 BEN78_06665 5c9de442035fba6c57dd60996f1ec03c 1056 Gene3D G3DSA:3.30.70.1440 676 874 0.0 T 13-10-2018 BEN78_06665 5c9de442035fba6c57dd60996f1ec03c 1056 SUPERFAMILY SSF82714 185 274 7.85E-20 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN78_06665 5c9de442035fba6c57dd60996f1ec03c 1056 Gene3D G3DSA:3.30.70.1320 135 335 0.0 T 13-10-2018 BEN78_06665 5c9de442035fba6c57dd60996f1ec03c 1056 SUPERFAMILY SSF82866 299 498 1.28E-50 T 13-10-2018 BEN78_06665 5c9de442035fba6c57dd60996f1ec03c 1056 Gene3D G3DSA:1.20.1640.10 523 1031 0.0 T 13-10-2018 BEN78_06665 5c9de442035fba6c57dd60996f1ec03c 1056 SUPERFAMILY SSF82693 138 333 2.62E-27 T 13-10-2018 BEN78_06665 5c9de442035fba6c57dd60996f1ec03c 1056 SUPERFAMILY SSF82714 729 816 1.7E-17 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN78_06665 5c9de442035fba6c57dd60996f1ec03c 1056 Gene3D G3DSA:3.30.70.1430 577 675 0.0 T 13-10-2018 BEN78_16205 c30b7731321a9e6e142d68700ea1936a 347 Pfam PF02016 LD-carboxypeptidase 46 332 4.1E-86 T 13-10-2018 IPR003507 Peptidase family S66 BEN78_16205 c30b7731321a9e6e142d68700ea1936a 347 Gene3D G3DSA:3.40.50.10740 34 185 2.5E-55 T 13-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal BEN78_16205 c30b7731321a9e6e142d68700ea1936a 347 PIRSF PIRSF028757 35 346 1.3E-85 T 13-10-2018 IPR003507 Peptidase family S66 BEN78_16205 c30b7731321a9e6e142d68700ea1936a 347 SUPERFAMILY SSF141986 201 338 1.83E-44 T 13-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily BEN78_16205 c30b7731321a9e6e142d68700ea1936a 347 Gene3D G3DSA:3.50.30.60 186 344 8.8E-46 T 13-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily BEN78_16205 c30b7731321a9e6e142d68700ea1936a 347 SUPERFAMILY SSF52317 36 183 1.01E-47 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN78_01755 cb5da3d4a3442c139383fa09bb710482 336 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 3.7E-22 T 13-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 BEN78_01755 cb5da3d4a3442c139383fa09bb710482 336 Gene3D G3DSA:3.30.930.10 8 336 8.8E-116 T 13-10-2018 BEN78_01755 cb5da3d4a3442c139383fa09bb710482 336 Pfam PF01409 tRNA synthetases class II core domain (F) 92 335 1.1E-105 T 13-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 BEN78_01755 cb5da3d4a3442c139383fa09bb710482 336 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 40 335 1.1E-101 T 13-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 BEN78_01755 cb5da3d4a3442c139383fa09bb710482 336 SUPERFAMILY SSF46589 12 99 2.14E-19 T 13-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 BEN78_01755 cb5da3d4a3442c139383fa09bb710482 336 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 335 48.116 T 13-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 BEN78_01755 cb5da3d4a3442c139383fa09bb710482 336 SUPERFAMILY SSF55681 92 335 8.11E-79 T 13-10-2018 BEN78_02500 5ad02e0a0af4c0fce43a42a18db49046 182 Pfam PF13302 Acetyltransferase (GNAT) domain 14 149 9.3E-18 T 13-10-2018 IPR000182 GNAT domain BEN78_02500 5ad02e0a0af4c0fce43a42a18db49046 182 SUPERFAMILY SSF55729 6 175 1.8E-35 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN78_02500 5ad02e0a0af4c0fce43a42a18db49046 182 Gene3D G3DSA:3.40.630.30 2 180 1.5E-35 T 13-10-2018 BEN78_14700 88a59942001040a513730b666b0b9920 203 Gene3D G3DSA:1.10.3890.10 2 202 1.7E-61 T 13-10-2018 IPR035932 HflD-like superfamily BEN78_14700 88a59942001040a513730b666b0b9920 203 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 22 194 5.0E-41 T 13-10-2018 BEN78_14700 88a59942001040a513730b666b0b9920 203 SUPERFAMILY SSF101322 2 200 3.92E-57 T 13-10-2018 IPR035932 HflD-like superfamily BEN78_14700 88a59942001040a513730b666b0b9920 203 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 203 29.344 T 13-10-2018 IPR007451 High frequency lysogenization protein HflD BEN78_14700 88a59942001040a513730b666b0b9920 203 Pfam PF04356 Protein of unknown function (DUF489) 7 195 7.3E-60 T 13-10-2018 IPR007451 High frequency lysogenization protein HflD BEN78_03110 14039382121a01f486564f1b687e05a3 348 Gene3D G3DSA:3.40.50.2300 178 307 1.1E-64 T 13-10-2018 BEN78_03110 14039382121a01f486564f1b687e05a3 348 Gene3D G3DSA:1.10.260.40 16 70 8.7E-22 T 13-10-2018 BEN78_03110 14039382121a01f486564f1b687e05a3 348 Pfam PF13377 Periplasmic binding protein-like domain 186 344 4.5E-36 T 13-10-2018 BEN78_03110 14039382121a01f486564f1b687e05a3 348 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 29 39 4.2E-6 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN78_03110 14039382121a01f486564f1b687e05a3 348 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 19 29 4.2E-6 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN78_03110 14039382121a01f486564f1b687e05a3 348 SUPERFAMILY SSF47413 17 75 2.81E-17 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN78_03110 14039382121a01f486564f1b687e05a3 348 SUPERFAMILY SSF53822 78 347 6.28E-65 T 13-10-2018 IPR028082 Periplasmic binding protein-like I BEN78_03110 14039382121a01f486564f1b687e05a3 348 Pfam PF00356 Bacterial regulatory proteins, lacI family 19 64 7.5E-20 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN78_03110 14039382121a01f486564f1b687e05a3 348 SMART SM00354 17 87 8.9E-27 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN78_03110 14039382121a01f486564f1b687e05a3 348 ProSitePatterns PS00356 LacI-type HTH domain signature. 20 38 - T 13-10-2018 BEN78_03110 14039382121a01f486564f1b687e05a3 348 Gene3D G3DSA:3.40.50.2300 71 323 1.1E-64 T 13-10-2018 BEN78_08470 0115cbb6595cab9db1e9b51a19179178 359 SMART SM01329 4 347 1.5E-182 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 BEN78_08470 0115cbb6595cab9db1e9b51a19179178 359 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 351 46.555 T 13-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 BEN78_08470 0115cbb6595cab9db1e9b51a19179178 359 SUPERFAMILY SSF53659 5 351 1.34E-114 T 13-10-2018 BEN78_08470 0115cbb6595cab9db1e9b51a19179178 359 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 5 345 1.4E-144 T 13-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 BEN78_08470 0115cbb6595cab9db1e9b51a19179178 359 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 347 1.8E-128 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 BEN78_08470 0115cbb6595cab9db1e9b51a19179178 359 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 239 258 - T 13-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 BEN78_08470 0115cbb6595cab9db1e9b51a19179178 359 Gene3D G3DSA:3.40.718.10 1 358 4.8E-139 T 13-10-2018 BEN78_06340 52dfa5b057d1db90e5813362cd379819 342 Gene3D G3DSA:3.30.540.10 1 198 1.5E-66 T 13-10-2018 BEN78_06340 52dfa5b057d1db90e5813362cd379819 342 PIRSF PIRSF500210 1 339 3.2E-121 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BEN78_06340 52dfa5b057d1db90e5813362cd379819 342 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 5 196 3.9E-55 T 13-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BEN78_06340 52dfa5b057d1db90e5813362cd379819 342 Gene3D G3DSA:3.40.190.80 199 336 3.6E-53 T 13-10-2018 BEN78_06340 52dfa5b057d1db90e5813362cd379819 342 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 4 336 45.489 T 13-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BEN78_06340 52dfa5b057d1db90e5813362cd379819 342 SUPERFAMILY SSF56655 3 334 8.4E-110 T 13-10-2018 BEN78_06340 52dfa5b057d1db90e5813362cd379819 342 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 208 235 1.5E-66 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BEN78_06340 52dfa5b057d1db90e5813362cd379819 342 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 69 95 1.5E-66 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BEN78_06340 52dfa5b057d1db90e5813362cd379819 342 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 182 205 1.5E-66 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BEN78_06340 52dfa5b057d1db90e5813362cd379819 342 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 28 55 1.5E-66 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BEN78_06340 52dfa5b057d1db90e5813362cd379819 342 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 151 174 1.5E-66 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BEN78_06340 52dfa5b057d1db90e5813362cd379819 342 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 310 335 1.5E-66 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BEN78_06340 52dfa5b057d1db90e5813362cd379819 342 PIRSF PIRSF000904 1 339 5.4E-119 T 13-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BEN78_06780 e45091a44bf4f91df9a4b721b2258cba 338 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 251 333 4.2E-17 T 13-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BEN78_06780 e45091a44bf4f91df9a4b721b2258cba 338 SUPERFAMILY SSF53901 5 338 1.2E-38 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 BEN78_06780 e45091a44bf4f91df9a4b721b2258cba 338 Gene3D G3DSA:3.40.47.10 1 198 8.6E-67 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 BEN78_06780 e45091a44bf4f91df9a4b721b2258cba 338 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 117 155 3.9E-6 T 13-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BEN78_06780 e45091a44bf4f91df9a4b721b2258cba 338 Gene3D G3DSA:3.40.47.10 199 338 9.3E-34 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 BEN78_03750 f79051b27d48f53c6a9086c33cec8fa3 304 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 303 30.498 T 13-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 BEN78_03750 f79051b27d48f53c6a9086c33cec8fa3 304 Gene3D G3DSA:3.40.50.150 107 304 1.2E-49 T 13-10-2018 BEN78_03750 f79051b27d48f53c6a9086c33cec8fa3 304 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 4 303 5.1E-91 T 13-10-2018 BEN78_03750 f79051b27d48f53c6a9086c33cec8fa3 304 SUPERFAMILY SSF53335 72 297 6.33E-38 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_03750 f79051b27d48f53c6a9086c33cec8fa3 304 PIRSF PIRSF000401 1 304 2.3E-88 T 13-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 BEN78_03750 f79051b27d48f53c6a9086c33cec8fa3 304 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 4 297 4.0E-67 T 13-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 BEN78_01745 7192712ace056943acd5dbb4dcb3f5fa 105 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 96 7.4E-47 T 13-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 BEN78_01745 7192712ace056943acd5dbb4dcb3f5fa 105 SMART SM00411 3 92 1.1E-41 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BEN78_01745 7192712ace056943acd5dbb4dcb3f5fa 105 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 9.1E-17 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BEN78_01745 7192712ace056943acd5dbb4dcb3f5fa 105 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 9.1E-17 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BEN78_01745 7192712ace056943acd5dbb4dcb3f5fa 105 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 9.1E-17 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BEN78_01745 7192712ace056943acd5dbb4dcb3f5fa 105 Gene3D G3DSA:4.10.520.10 1 96 4.6E-37 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 BEN78_01745 7192712ace056943acd5dbb4dcb3f5fa 105 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 13-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 BEN78_01745 7192712ace056943acd5dbb4dcb3f5fa 105 SUPERFAMILY SSF47729 3 92 2.21E-32 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 BEN78_01745 7192712ace056943acd5dbb4dcb3f5fa 105 Pfam PF00216 Bacterial DNA-binding protein 3 91 2.2E-32 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BEN78_01745 7192712ace056943acd5dbb4dcb3f5fa 105 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 29.455 T 13-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 BEN78_11125 e0f7c551719d07be2e5e4a5fa5510b64 62 ProSitePatterns PS00579 Ribosomal protein L29 signature. 40 54 - T 13-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11125 e0f7c551719d07be2e5e4a5fa5510b64 62 SUPERFAMILY SSF46561 3 62 2.75E-19 T 13-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11125 e0f7c551719d07be2e5e4a5fa5510b64 62 TIGRFAM TIGR00012 L29: ribosomal protein uL29 6 61 2.7E-21 T 13-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11125 e0f7c551719d07be2e5e4a5fa5510b64 62 Pfam PF00831 Ribosomal L29 protein 5 61 1.6E-21 T 13-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11125 e0f7c551719d07be2e5e4a5fa5510b64 62 Gene3D G3DSA:1.10.287.310 3 62 1.7E-24 T 13-10-2018 BEN78_11125 e0f7c551719d07be2e5e4a5fa5510b64 62 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 61 16.648 T 13-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_06645 ce2add36950155294ec99e273ee54692 925 Pfam PF00593 TonB dependent receptor 382 923 1.3E-49 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_06645 ce2add36950155294ec99e273ee54692 925 Gene3D G3DSA:2.170.130.10 36 176 1.7E-37 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_06645 ce2add36950155294ec99e273ee54692 925 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 172 6.9E-26 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_06645 ce2add36950155294ec99e273ee54692 925 Gene3D G3DSA:2.40.170.20 410 924 1.3E-60 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_06645 ce2add36950155294ec99e273ee54692 925 SUPERFAMILY SSF56935 41 924 3.15E-99 T 13-10-2018 BEN78_00525 290013648228d0ce7f49bd38cb4b402e 257 SUPERFAMILY SSF49354 31 156 3.66E-23 T 13-10-2018 IPR008962 PapD-like superfamily BEN78_00525 290013648228d0ce7f49bd38cb4b402e 257 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 48 156 1.3E-17 T 13-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 BEN78_00525 290013648228d0ce7f49bd38cb4b402e 257 Gene3D G3DSA:2.60.40.10 45 158 4.3E-8 T 13-10-2018 IPR013783 Immunoglobulin-like fold BEN78_06890 2beb21ef60fc64dde71c49f6cb2fbbf9 851 Gene3D G3DSA:3.40.50.300 190 362 1.4E-54 T 13-10-2018 BEN78_06890 2beb21ef60fc64dde71c49f6cb2fbbf9 851 SMART SM00487 7 196 7.3E-12 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN78_06890 2beb21ef60fc64dde71c49f6cb2fbbf9 851 SUPERFAMILY SSF52540 22 357 1.39E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_06890 2beb21ef60fc64dde71c49f6cb2fbbf9 851 Gene3D G3DSA:3.40.50.300 2 189 1.4E-50 T 13-10-2018 BEN78_06890 2beb21ef60fc64dde71c49f6cb2fbbf9 851 Pfam PF00271 Helicase conserved C-terminal domain 219 345 6.8E-15 T 13-10-2018 IPR001650 Helicase, C-terminal BEN78_06890 2beb21ef60fc64dde71c49f6cb2fbbf9 851 Pfam PF08482 ATP-dependent helicase C-terminal 700 837 1.6E-51 T 13-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal BEN78_06890 2beb21ef60fc64dde71c49f6cb2fbbf9 851 PIRSF PIRSF005496 4 851 0.0 T 13-10-2018 BEN78_06890 2beb21ef60fc64dde71c49f6cb2fbbf9 851 Pfam PF04408 Helicase associated domain (HA2) 402 497 3.4E-14 T 13-10-2018 IPR007502 Helicase-associated domain GO:0004386 BEN78_06890 2beb21ef60fc64dde71c49f6cb2fbbf9 851 Gene3D G3DSA:1.20.120.1080 385 480 7.0E-8 T 13-10-2018 BEN78_06890 2beb21ef60fc64dde71c49f6cb2fbbf9 851 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 9 850 0.0 T 13-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 BEN78_06890 2beb21ef60fc64dde71c49f6cb2fbbf9 851 SMART SM00490 247 346 3.5E-16 T 13-10-2018 IPR001650 Helicase, C-terminal BEN78_06890 2beb21ef60fc64dde71c49f6cb2fbbf9 851 SMART SM00847 401 532 2.3E-12 T 13-10-2018 IPR007502 Helicase-associated domain GO:0004386 BEN78_07300 bddae7b99efedda97b7879644e69d1ae 435 Pfam PF03069 Acetamidase/Formamidase family 281 400 7.2E-16 T 13-10-2018 IPR004304 Acetamidase/Formamidase GO:0016811 BEN78_07300 bddae7b99efedda97b7879644e69d1ae 435 SUPERFAMILY SSF141130 126 422 1.1E-68 T 13-10-2018 BEN78_07300 bddae7b99efedda97b7879644e69d1ae 435 Gene3D G3DSA:2.60.120.580 248 341 9.6E-28 T 13-10-2018 BEN78_07300 bddae7b99efedda97b7879644e69d1ae 435 Gene3D G3DSA:2.60.120.580 121 218 2.8E-14 T 13-10-2018 BEN78_07300 bddae7b99efedda97b7879644e69d1ae 435 Gene3D G3DSA:3.10.28.20 344 425 1.6E-9 T 13-10-2018 BEN78_13330 e380bbcf8f07d21e66a1020bd94963fc 336 Gene3D G3DSA:3.40.50.2300 160 288 4.9E-82 T 13-10-2018 BEN78_13330 e380bbcf8f07d21e66a1020bd94963fc 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 1.0E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN78_13330 e380bbcf8f07d21e66a1020bd94963fc 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 1.0E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN78_13330 e380bbcf8f07d21e66a1020bd94963fc 336 SUPERFAMILY SSF47413 2 60 2.1E-17 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN78_13330 e380bbcf8f07d21e66a1020bd94963fc 336 Gene3D G3DSA:3.40.50.2300 57 304 4.9E-82 T 13-10-2018 BEN78_13330 e380bbcf8f07d21e66a1020bd94963fc 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 13-10-2018 BEN78_13330 e380bbcf8f07d21e66a1020bd94963fc 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 6.1E-17 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN78_13330 e380bbcf8f07d21e66a1020bd94963fc 336 SMART SM00354 2 72 5.9E-26 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN78_13330 e380bbcf8f07d21e66a1020bd94963fc 336 SUPERFAMILY SSF53822 61 332 1.18E-72 T 13-10-2018 IPR028082 Periplasmic binding protein-like I BEN78_13330 e380bbcf8f07d21e66a1020bd94963fc 336 Pfam PF13377 Periplasmic binding protein-like domain 168 330 8.5E-36 T 13-10-2018 BEN78_13330 e380bbcf8f07d21e66a1020bd94963fc 336 Gene3D G3DSA:1.10.260.40 1 56 3.0E-22 T 13-10-2018 BEN78_04125 643234fe9f57b12b2d00af615f63672d 251 Pfam PF07277 SapC 7 231 1.8E-63 T 13-10-2018 IPR010836 SapC BEN78_04480 b25eeccaf9b6cd1c0962d9e5828d7183 205 SUPERFAMILY SSF46785 5 84 2.24E-12 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_04480 b25eeccaf9b6cd1c0962d9e5828d7183 205 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 68 1.6E-11 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN78_04480 b25eeccaf9b6cd1c0962d9e5828d7183 205 Gene3D G3DSA:1.10.10.10 7 69 3.7E-13 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_04480 b25eeccaf9b6cd1c0962d9e5828d7183 205 SMART SM00345 10 68 1.4E-8 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN78_08805 7a1d25bef4293e897b308f50d6a8ce38 118 SUPERFAMILY SSF143120 27 72 9.29E-7 T 13-10-2018 IPR036165 YefM-like superfamily BEN78_08805 7a1d25bef4293e897b308f50d6a8ce38 118 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 29 59 4.9E-8 T 13-10-2018 BEN78_08805 7a1d25bef4293e897b308f50d6a8ce38 118 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 29 77 1.2E-8 T 13-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM BEN78_16200 bdf19b6e0bc6dedd73fbe420312d21a1 259 SMART SM00420 10 62 1.8E-16 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BEN78_16200 bdf19b6e0bc6dedd73fbe420312d21a1 259 SMART SM01134 80 240 2.1E-71 T 13-10-2018 BEN78_16200 bdf19b6e0bc6dedd73fbe420312d21a1 259 ProSitePatterns PS00894 DeoR-type HTH domain signature. 10 44 - T 13-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 BEN78_16200 bdf19b6e0bc6dedd73fbe420312d21a1 259 SUPERFAMILY SSF100950 83 240 1.4E-33 T 13-10-2018 IPR037171 NagB/RpiA transferase-like BEN78_16200 bdf19b6e0bc6dedd73fbe420312d21a1 259 SUPERFAMILY SSF46785 7 61 3.7E-10 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_16200 bdf19b6e0bc6dedd73fbe420312d21a1 259 Gene3D G3DSA:3.40.50.1360 80 236 2.0E-5 T 13-10-2018 BEN78_16200 bdf19b6e0bc6dedd73fbe420312d21a1 259 Pfam PF00455 DeoR C terminal sensor domain 83 239 1.9E-51 T 13-10-2018 IPR014036 DeoR C-terminal sensor domain BEN78_16200 bdf19b6e0bc6dedd73fbe420312d21a1 259 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 28 42 5.1E-7 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BEN78_16200 bdf19b6e0bc6dedd73fbe420312d21a1 259 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 42 60 5.1E-7 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BEN78_16200 bdf19b6e0bc6dedd73fbe420312d21a1 259 Gene3D G3DSA:1.10.10.10 2 63 3.5E-7 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_16200 bdf19b6e0bc6dedd73fbe420312d21a1 259 Pfam PF08220 DeoR-like helix-turn-helix domain 10 61 1.0E-17 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BEN78_11440 edc99f6be0b2973a3c3037eb598e29c6 406 Gene3D G3DSA:3.20.20.140 26 406 1.3E-113 T 13-10-2018 BEN78_11440 edc99f6be0b2973a3c3037eb598e29c6 406 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 32 399 4.9E-92 T 13-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 BEN78_11440 edc99f6be0b2973a3c3037eb598e29c6 406 SUPERFAMILY SSF51556 27 401 1.36E-88 T 13-10-2018 IPR032466 Metal-dependent hydrolase BEN78_16515 ab6078bfcecf3e254352b83992aff290 273 SUPERFAMILY SSF50494 88 258 1.95E-9 T 13-10-2018 IPR009003 Peptidase S1, PA clan BEN78_16515 ab6078bfcecf3e254352b83992aff290 273 PRINTS PR00861 Alpha-lytic endopeptidase serine protease (S2A) signature 235 249 7.0E-5 T 13-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 BEN78_16515 ab6078bfcecf3e254352b83992aff290 273 PRINTS PR00861 Alpha-lytic endopeptidase serine protease (S2A) signature 188 205 7.0E-5 T 13-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 BEN78_16515 ab6078bfcecf3e254352b83992aff290 273 PRINTS PR00861 Alpha-lytic endopeptidase serine protease (S2A) signature 110 124 7.0E-5 T 13-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 BEN78_16515 ab6078bfcecf3e254352b83992aff290 273 PRINTS PR00861 Alpha-lytic endopeptidase serine protease (S2A) signature 167 187 7.0E-5 T 13-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 BEN78_16515 ab6078bfcecf3e254352b83992aff290 273 Gene3D G3DSA:2.40.10.10 84 262 1.0E-29 T 13-10-2018 BEN78_16515 ab6078bfcecf3e254352b83992aff290 273 Gene3D G3DSA:2.40.10.10 154 258 1.0E-29 T 13-10-2018 BEN78_08190 33f88ef2eb95286474c7133997dd7e36 589 Pfam PF03814 Potassium-transporting ATPase A subunit 8 580 2.2E-200 T 13-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 BEN78_08190 33f88ef2eb95286474c7133997dd7e36 589 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 1 582 27.142 T 13-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 BEN78_08190 33f88ef2eb95286474c7133997dd7e36 589 PIRSF PIRSF001294 1 584 7.4E-205 T 13-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 BEN78_15495 e5771f675a5cf7b370de712cd40b9405 191 SUPERFAMILY SSF51306 68 189 4.88E-33 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily BEN78_15495 e5771f675a5cf7b370de712cd40b9405 191 Gene3D G3DSA:2.10.109.10 73 191 9.6E-35 T 13-10-2018 BEN78_15495 e5771f675a5cf7b370de712cd40b9405 191 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 104 114 6.1E-11 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 BEN78_15495 e5771f675a5cf7b370de712cd40b9405 191 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 143 155 6.1E-11 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 BEN78_15495 e5771f675a5cf7b370de712cd40b9405 191 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 115 126 6.1E-11 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 BEN78_15495 e5771f675a5cf7b370de712cd40b9405 191 SUPERFAMILY SSF46785 2 58 2.66E-10 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_15495 e5771f675a5cf7b370de712cd40b9405 191 TIGRFAM TIGR00498 lexA: repressor LexA 1 190 1.3E-43 T 13-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 BEN78_15495 e5771f675a5cf7b370de712cd40b9405 191 Gene3D G3DSA:1.10.10.10 1 58 3.1E-15 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_15495 e5771f675a5cf7b370de712cd40b9405 191 Pfam PF01726 LexA DNA binding domain 1 54 5.1E-10 T 13-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 BEN78_15495 e5771f675a5cf7b370de712cd40b9405 191 Pfam PF00717 Peptidase S24-like 107 173 1.0E-16 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C BEN78_15430 2bc4b8efc2ef4ba73f007e864595f16e 347 PIRSF PIRSF004911 6 338 1.2E-105 T 13-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase BEN78_15430 2bc4b8efc2ef4ba73f007e864595f16e 347 Pfam PF13394 4Fe-4S single cluster domain 114 185 8.9E-5 T 13-10-2018 BEN78_15430 2bc4b8efc2ef4ba73f007e864595f16e 347 Gene3D G3DSA:3.20.20.70 49 333 1.0E-81 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_15430 2bc4b8efc2ef4ba73f007e864595f16e 347 SUPERFAMILY SSF102114 106 322 1.57E-19 T 13-10-2018 BEN78_15430 2bc4b8efc2ef4ba73f007e864595f16e 347 TIGRFAM TIGR00238 TIGR00238: KamA family protein 13 327 6.3E-87 T 13-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase BEN78_15430 2bc4b8efc2ef4ba73f007e864595f16e 347 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 14 333 9.2E-131 T 13-10-2018 IPR022462 Lysine-2,3-aminomutase-like BEN78_02105 5c3c4778f91766e713be6117a92aaa9b 412 SUPERFAMILY SSF55874 275 406 2.88E-26 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_02105 5c3c4778f91766e713be6117a92aaa9b 412 SMART SM00388 203 269 5.0E-7 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_02105 5c3c4778f91766e713be6117a92aaa9b 412 SMART SM00387 311 412 3.1E-22 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_02105 5c3c4778f91766e713be6117a92aaa9b 412 Gene3D G3DSA:1.10.287.130 157 268 2.1E-17 T 13-10-2018 BEN78_02105 5c3c4778f91766e713be6117a92aaa9b 412 Gene3D G3DSA:3.30.565.10 272 412 6.0E-25 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_02105 5c3c4778f91766e713be6117a92aaa9b 412 Pfam PF00512 His Kinase A (phospho-acceptor) domain 207 266 2.2E-9 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_02105 5c3c4778f91766e713be6117a92aaa9b 412 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 318 408 1.6E-16 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_02105 5c3c4778f91766e713be6117a92aaa9b 412 PRINTS PR00344 Bacterial sensor protein C-terminal signature 343 357 6.5E-6 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_02105 5c3c4778f91766e713be6117a92aaa9b 412 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 391 6.5E-6 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_02105 5c3c4778f91766e713be6117a92aaa9b 412 SUPERFAMILY SSF47384 186 265 4.12E-13 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN78_04000 a0882bb147489e43b83f8e48e6881c35 432 Pfam PF02687 FtsX-like permease family 335 422 5.7E-14 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BEN78_04000 a0882bb147489e43b83f8e48e6881c35 432 Pfam PF12704 MacB-like periplasmic core domain 20 264 5.9E-20 T 13-10-2018 IPR025857 MacB-like periplasmic core domain BEN78_00225 8e9f237f91060b3b4ff1f59e3f4cedf2 183 Gene3D G3DSA:1.10.1740.10 11 83 2.7E-5 T 13-10-2018 BEN78_00225 8e9f237f91060b3b4ff1f59e3f4cedf2 183 SUPERFAMILY SSF88659 94 169 5.98E-12 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN78_00225 8e9f237f91060b3b4ff1f59e3f4cedf2 183 SUPERFAMILY SSF88946 16 103 1.14E-8 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BEN78_00225 8e9f237f91060b3b4ff1f59e3f4cedf2 183 Gene3D G3DSA:1.10.10.10 98 171 7.1E-11 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_00225 8e9f237f91060b3b4ff1f59e3f4cedf2 183 Pfam PF08281 Sigma-70, region 4 115 166 4.2E-11 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BEN78_00225 8e9f237f91060b3b4ff1f59e3f4cedf2 183 Pfam PF04542 Sigma-70 region 2 23 83 7.5E-5 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BEN78_00225 8e9f237f91060b3b4ff1f59e3f4cedf2 183 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 167 2.6E-17 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BEN78_11260 63180e9cb9af3d801dd00150be32b9eb 633 TIGRFAM TIGR02316 propion_prpE: propionate--CoA ligase 1 627 0.0 T 13-10-2018 IPR012694 Propionate--CoA ligase GO:0019629|GO:0050218 KEGG: 00640+6.2.1.17|MetaCyc: PWY-3941|MetaCyc: PWY-5104|MetaCyc: PWY-5747 BEN78_11260 63180e9cb9af3d801dd00150be32b9eb 633 Pfam PF00501 AMP-binding enzyme 60 502 1.5E-82 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BEN78_11260 63180e9cb9af3d801dd00150be32b9eb 633 Gene3D G3DSA:3.30.300.30 498 630 2.3E-27 T 13-10-2018 BEN78_11260 63180e9cb9af3d801dd00150be32b9eb 633 Gene3D G3DSA:3.40.50.12780 33 495 3.6E-96 T 13-10-2018 BEN78_11260 63180e9cb9af3d801dd00150be32b9eb 633 Pfam PF13193 AMP-binding enzyme C-terminal domain 511 592 6.4E-23 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BEN78_11260 63180e9cb9af3d801dd00150be32b9eb 633 SUPERFAMILY SSF56801 3 626 1.3E-158 T 13-10-2018 BEN78_11260 63180e9cb9af3d801dd00150be32b9eb 633 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 3 57 8.0E-24 T 13-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 BEN78_11260 63180e9cb9af3d801dd00150be32b9eb 633 ProSitePatterns PS00455 Putative AMP-binding domain signature. 238 249 - T 13-10-2018 IPR020845 AMP-binding, conserved site BEN78_04545 e67f192a6c7df727d1adfac3c056cf89 136 Gene3D G3DSA:3.40.50.2300 6 136 3.6E-17 T 13-10-2018 BEN78_04545 e67f192a6c7df727d1adfac3c056cf89 136 SMART SM00448 14 124 1.2E-5 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_04545 e67f192a6c7df727d1adfac3c056cf89 136 SUPERFAMILY SSF52172 13 97 8.97E-19 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_04545 e67f192a6c7df727d1adfac3c056cf89 136 Pfam PF00072 Response regulator receiver domain 16 96 4.4E-11 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_15955 892d5c632e881be978c33ef949633ce6 262 Pfam PF05013 N-formylglutamate amidohydrolase 16 215 1.1E-23 T 13-10-2018 IPR007709 N-formylglutamate amidohydrolase BEN78_15955 892d5c632e881be978c33ef949633ce6 262 Gene3D G3DSA:3.40.630.40 6 236 2.8E-12 T 13-10-2018 BEN78_15955 892d5c632e881be978c33ef949633ce6 262 SUPERFAMILY SSF53187 12 211 4.69E-20 T 13-10-2018 BEN78_06880 0b50cc5a9569412661c383c2521683e8 279 SUPERFAMILY SSF51556 15 278 3.03E-80 T 13-10-2018 IPR032466 Metal-dependent hydrolase BEN78_06880 0b50cc5a9569412661c383c2521683e8 279 Gene3D G3DSA:3.20.20.140 14 279 1.7E-92 T 13-10-2018 BEN78_06880 0b50cc5a9569412661c383c2521683e8 279 PIRSF PIRSF005902 5 279 9.4E-71 T 13-10-2018 IPR001130 TatD family GO:0016788 BEN78_06880 0b50cc5a9569412661c383c2521683e8 279 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 209 225 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 BEN78_06880 0b50cc5a9569412661c383c2521683e8 279 Pfam PF01026 TatD related DNase 16 276 5.2E-65 T 13-10-2018 IPR001130 TatD family GO:0016788 BEN78_06880 0b50cc5a9569412661c383c2521683e8 279 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 143 153 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 BEN78_05915 186c14518d9b126e2b81b0c34f333031 183 Gene3D G3DSA:3.40.250.10 9 112 3.3E-20 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily BEN78_05915 186c14518d9b126e2b81b0c34f333031 183 SUPERFAMILY SSF52821 6 157 2.62E-26 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily BEN78_05915 186c14518d9b126e2b81b0c34f333031 183 Pfam PF11127 Protein of unknown function (DUF2892) 116 175 1.7E-9 T 13-10-2018 IPR021309 Protein of unknown function DUF2892 BEN78_05915 186c14518d9b126e2b81b0c34f333031 183 SMART SM00450 8 105 3.8E-16 T 13-10-2018 IPR001763 Rhodanese-like domain BEN78_05915 186c14518d9b126e2b81b0c34f333031 183 Pfam PF00581 Rhodanese-like domain 19 101 7.5E-12 T 13-10-2018 IPR001763 Rhodanese-like domain BEN78_13225 c328fad40152b3aef395902aa96c9b45 389 Gene3D G3DSA:3.40.50.720 178 338 8.1E-128 T 13-10-2018 BEN78_13225 c328fad40152b3aef395902aa96c9b45 389 Pfam PF13823 Alcohol dehydrogenase GroES-associated 1 21 5.3E-12 T 13-10-2018 IPR027399 Alcohol dehydrogenase GroES-associated BEN78_13225 c328fad40152b3aef395902aa96c9b45 389 Gene3D G3DSA:3.90.180.10 9 374 8.1E-128 T 13-10-2018 BEN78_13225 c328fad40152b3aef395902aa96c9b45 389 SUPERFAMILY SSF51735 164 348 8.81E-60 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_13225 c328fad40152b3aef395902aa96c9b45 389 Pfam PF00107 Zinc-binding dehydrogenase 197 267 2.2E-7 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BEN78_13225 c328fad40152b3aef395902aa96c9b45 389 SUPERFAMILY SSF50129 1 196 6.09E-57 T 13-10-2018 IPR011032 GroES-like superfamily BEN78_13225 c328fad40152b3aef395902aa96c9b45 389 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 152 1.1E-27 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BEN78_13225 c328fad40152b3aef395902aa96c9b45 389 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 13-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 BEN78_16175 d71ff0e1535e571237c3c6ea1c4e647a 386 SUPERFAMILY SSF53697 21 375 2.49E-48 T 13-10-2018 BEN78_16175 d71ff0e1535e571237c3c6ea1c4e647a 386 Gene3D G3DSA:3.40.50.10490 202 378 6.3E-56 T 13-10-2018 BEN78_16175 d71ff0e1535e571237c3c6ea1c4e647a 386 Pfam PF01380 SIS domain 61 191 2.9E-16 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BEN78_16175 d71ff0e1535e571237c3c6ea1c4e647a 386 Gene3D G3DSA:3.40.50.10490 6 199 2.1E-51 T 13-10-2018 BEN78_13390 feb710f7baaba62301ffa387284ccea7 718 SUPERFAMILY SSF54862 504 675 2.06E-10 T 13-10-2018 BEN78_13390 feb710f7baaba62301ffa387284ccea7 718 SMART SM00900 103 195 4.2E-5 T 13-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 BEN78_13390 feb710f7baaba62301ffa387284ccea7 718 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 643 654 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BEN78_13390 feb710f7baaba62301ffa387284ccea7 718 PIRSF PIRSF036354 36 716 2.5E-173 T 13-10-2018 IPR011399 Nitrous oxide reductase expression regulator NosR GO:0003677|GO:0016020|GO:0045893 BEN78_13390 feb710f7baaba62301ffa387284ccea7 718 Pfam PF12801 4Fe-4S binding domain 491 536 2.1E-12 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BEN78_13390 feb710f7baaba62301ffa387284ccea7 718 Pfam PF12801 4Fe-4S binding domain 595 638 9.2E-7 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BEN78_13390 feb710f7baaba62301ffa387284ccea7 718 Pfam PF04205 FMN-binding domain 103 188 5.7E-5 T 13-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 BEN78_07355 0c071cd3e878eaf0f1ff5483508c2a8e 740 SUPERFAMILY SSF56935 35 740 9.57E-74 T 13-10-2018 BEN78_07355 0c071cd3e878eaf0f1ff5483508c2a8e 740 Gene3D G3DSA:2.170.130.10 39 161 1.6E-15 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_07355 0c071cd3e878eaf0f1ff5483508c2a8e 740 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 157 6.4E-7 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_07355 0c071cd3e878eaf0f1ff5483508c2a8e 740 Gene3D G3DSA:2.40.170.20 169 740 3.4E-59 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_07355 0c071cd3e878eaf0f1ff5483508c2a8e 740 Pfam PF00593 TonB dependent receptor 302 734 1.0E-35 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_14960 0683f233208c82eb8c185d2f37685f05 452 Gene3D G3DSA:3.40.710.10 27 353 5.9E-80 T 13-10-2018 BEN78_14960 0683f233208c82eb8c185d2f37685f05 452 SUPERFAMILY SSF56601 30 338 1.23E-71 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BEN78_14960 0683f233208c82eb8c185d2f37685f05 452 Pfam PF00144 Beta-lactamase 24 342 6.0E-58 T 13-10-2018 IPR001466 Beta-lactamase-related BEN78_12095 77e04c449b5650d7c135e3c89e27e1c0 509 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 457 474 - T 13-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_12095 77e04c449b5650d7c135e3c89e27e1c0 509 SUPERFAMILY SSF53697 11 506 1.72E-158 T 13-10-2018 BEN78_12095 77e04c449b5650d7c135e3c89e27e1c0 509 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 42 484 37.171 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_12095 77e04c449b5650d7c135e3c89e27e1c0 509 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 244 257 - T 13-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_12095 77e04c449b5650d7c135e3c89e27e1c0 509 Gene3D G3DSA:3.40.50.10490 11 466 3.3E-170 T 13-10-2018 BEN78_12095 77e04c449b5650d7c135e3c89e27e1c0 509 Pfam PF00342 Phosphoglucose isomerase 49 499 6.2E-142 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_12095 77e04c449b5650d7c135e3c89e27e1c0 509 PRINTS PR00662 Glucose-6-phosphate isomerase signature 317 338 6.0E-48 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_12095 77e04c449b5650d7c135e3c89e27e1c0 509 PRINTS PR00662 Glucose-6-phosphate isomerase signature 425 443 6.0E-48 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_12095 77e04c449b5650d7c135e3c89e27e1c0 509 PRINTS PR00662 Glucose-6-phosphate isomerase signature 136 155 6.0E-48 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_12095 77e04c449b5650d7c135e3c89e27e1c0 509 PRINTS PR00662 Glucose-6-phosphate isomerase signature 457 470 6.0E-48 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_12095 77e04c449b5650d7c135e3c89e27e1c0 509 PRINTS PR00662 Glucose-6-phosphate isomerase signature 240 258 6.0E-48 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_12095 77e04c449b5650d7c135e3c89e27e1c0 509 PRINTS PR00662 Glucose-6-phosphate isomerase signature 443 457 6.0E-48 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_12095 77e04c449b5650d7c135e3c89e27e1c0 509 Gene3D G3DSA:3.40.50.10490 94 270 3.3E-170 T 13-10-2018 BEN78_12095 77e04c449b5650d7c135e3c89e27e1c0 509 Gene3D G3DSA:1.10.1390.10 467 507 4.2E-12 T 13-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_15995 04a7ea2415093529c3f61c02af95da3b 147 SUPERFAMILY SSF141488 67 142 1.57E-7 T 13-10-2018 IPR036328 C-type lysozyme inhibitor superfamily BEN78_15995 04a7ea2415093529c3f61c02af95da3b 147 Gene3D G3DSA:2.40.128.200 66 141 2.1E-9 T 13-10-2018 IPR036328 C-type lysozyme inhibitor superfamily BEN78_15995 04a7ea2415093529c3f61c02af95da3b 147 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 71 132 3.5E-7 T 13-10-2018 IPR018660 C-type lysozyme inhibitor BEN78_06480 3405b2c39466a5e6d9b9f623bb120a36 66 Gene3D G3DSA:1.10.260.40 1 64 3.0E-24 T 13-10-2018 BEN78_06480 3405b2c39466a5e6d9b9f623bb120a36 66 SUPERFAMILY SSF47413 2 63 1.97E-16 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN78_06480 3405b2c39466a5e6d9b9f623bb120a36 66 SMART SM00530 4 59 9.3E-15 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN78_06480 3405b2c39466a5e6d9b9f623bb120a36 66 Pfam PF01381 Helix-turn-helix 5 56 7.4E-14 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN78_16605 ade1c5246135949dbd7f5907044c5788 204 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 3 194 5.4E-65 T 13-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 BEN78_16605 ade1c5246135949dbd7f5907044c5788 204 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 2 196 32.949 T 13-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 BEN78_16605 ade1c5246135949dbd7f5907044c5788 204 SUPERFAMILY SSF52317 3 194 3.3E-47 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN78_16605 ade1c5246135949dbd7f5907044c5788 204 PIRSF PIRSF000495 1 198 2.4E-63 T 13-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 BEN78_16605 ade1c5246135949dbd7f5907044c5788 204 Gene3D G3DSA:3.40.50.880 1 200 8.4E-63 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN78_16605 ade1c5246135949dbd7f5907044c5788 204 Pfam PF00117 Glutamine amidotransferase class-I 5 194 2.2E-17 T 13-10-2018 IPR017926 Glutamine amidotransferase BEN78_10280 2383dab2fb534b96f03d0336fa3c3606 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 158 173 1.2E-18 T 13-10-2018 BEN78_10280 2383dab2fb534b96f03d0336fa3c3606 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 1.2E-18 T 13-10-2018 BEN78_10280 2383dab2fb534b96f03d0336fa3c3606 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 1.2E-18 T 13-10-2018 BEN78_10280 2383dab2fb534b96f03d0336fa3c3606 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 1.2E-18 T 13-10-2018 BEN78_10280 2383dab2fb534b96f03d0336fa3c3606 402 Pfam PF01494 FAD binding domain 6 343 5.9E-30 T 13-10-2018 IPR002938 FAD-binding domain GO:0071949 BEN78_10280 2383dab2fb534b96f03d0336fa3c3606 402 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 7 388 5.7E-100 T 13-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 BEN78_10280 2383dab2fb534b96f03d0336fa3c3606 402 Gene3D G3DSA:3.50.50.60 7 336 2.0E-80 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_10280 2383dab2fb534b96f03d0336fa3c3606 402 SUPERFAMILY SSF51905 6 375 1.3E-46 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_10280 2383dab2fb534b96f03d0336fa3c3606 402 Gene3D G3DSA:3.30.9.50 78 271 2.0E-80 T 13-10-2018 BEN78_10280 2383dab2fb534b96f03d0336fa3c3606 402 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 7 388 2.7E-118 T 13-10-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 BEN78_08330 f80e504af55d52d855e60bf0effedbe3 236 Pfam PF02678 Pirin 10 119 5.2E-31 T 13-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 BEN78_08330 f80e504af55d52d855e60bf0effedbe3 236 Gene3D G3DSA:2.60.120.10 7 235 6.8E-83 T 13-10-2018 IPR014710 RmlC-like jelly roll fold BEN78_08330 f80e504af55d52d855e60bf0effedbe3 236 Gene3D G3DSA:2.60.120.10 11 135 6.8E-83 T 13-10-2018 IPR014710 RmlC-like jelly roll fold BEN78_08330 f80e504af55d52d855e60bf0effedbe3 236 SUPERFAMILY SSF51182 1 234 2.3E-65 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily BEN78_08330 f80e504af55d52d855e60bf0effedbe3 236 PIRSF PIRSF006232 1 233 3.1E-49 T 13-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 BEN78_07915 4707f839a249b065cfa8946933e0c29c 276 Pfam PF00535 Glycosyl transferase family 2 13 135 1.4E-22 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BEN78_07915 4707f839a249b065cfa8946933e0c29c 276 SUPERFAMILY SSF53448 10 226 8.8E-32 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_07915 4707f839a249b065cfa8946933e0c29c 276 Gene3D G3DSA:3.90.550.10 7 252 2.2E-42 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_02210 8bc60233fd7dfe56bf9ba8735b0eaa1a 410 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 120 394 4.4E-77 T 13-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 BEN78_02210 8bc60233fd7dfe56bf9ba8735b0eaa1a 410 SUPERFAMILY SSF101960 17 402 3.14E-88 T 13-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily BEN78_02210 8bc60233fd7dfe56bf9ba8735b0eaa1a 410 Pfam PF01458 Uncharacterized protein family (UPF0051) 157 379 1.1E-57 T 13-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 BEN78_09470 8f3cdcea37b90c5ce01b80fe836988b1 366 SUPERFAMILY SSF55821 2 202 2.06E-84 T 13-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily BEN78_09470 8f3cdcea37b90c5ce01b80fe836988b1 366 PIRSF PIRSF001259 1 366 9.5E-119 T 13-10-2018 BEN78_09470 8f3cdcea37b90c5ce01b80fe836988b1 366 SUPERFAMILY SSF142695 204 365 4.05E-40 T 13-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 BEN78_09470 8f3cdcea37b90c5ce01b80fe836988b1 366 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.429 T 13-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BEN78_09470 8f3cdcea37b90c5ce01b80fe836988b1 366 Gene3D G3DSA:3.90.870.10 1 206 1.3E-88 T 13-10-2018 BEN78_09470 8f3cdcea37b90c5ce01b80fe836988b1 366 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 8 198 3.4E-84 T 13-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BEN78_09470 8f3cdcea37b90c5ce01b80fe836988b1 366 Pfam PF00925 GTP cyclohydrolase II 208 365 2.0E-28 T 13-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 BEN78_09470 8f3cdcea37b90c5ce01b80fe836988b1 366 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 4 199 1.0E-72 T 13-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BEN78_04315 20a78721faccc83810fe979eaf955384 179 Pfam PF14366 Domain of unknown function (DUF4410) 49 151 5.7E-11 T 13-10-2018 IPR025522 Protein of unknown function DUF4410 BEN78_13920 72af2f0a99ef367cfca0957e2b1da1b2 185 SUPERFAMILY SSF48498 83 182 9.67E-11 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BEN78_13920 72af2f0a99ef367cfca0957e2b1da1b2 185 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 6.9E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN78_13920 72af2f0a99ef367cfca0957e2b1da1b2 185 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 6.9E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN78_13920 72af2f0a99ef367cfca0957e2b1da1b2 185 Gene3D G3DSA:1.10.357.10 2 185 5.4E-50 T 13-10-2018 BEN78_13920 72af2f0a99ef367cfca0957e2b1da1b2 185 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 63 5.7E-14 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN78_13920 72af2f0a99ef367cfca0957e2b1da1b2 185 SUPERFAMILY SSF46689 5 81 7.98E-18 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN78_00690 5869b779476f56766e369b173770a67d 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 8.0E-15 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_00690 5869b779476f56766e369b173770a67d 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.7E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_00690 5869b779476f56766e369b173770a67d 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.7E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_00690 5869b779476f56766e369b173770a67d 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.7E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_00690 5869b779476f56766e369b173770a67d 215 Gene3D G3DSA:3.40.50.12740 3 208 2.1E-56 T 13-10-2018 BEN78_00690 5869b779476f56766e369b173770a67d 215 SUPERFAMILY SSF46894 143 209 3.2E-17 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BEN78_00690 5869b779476f56766e369b173770a67d 215 SMART SM00421 146 203 4.4E-16 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_00690 5869b779476f56766e369b173770a67d 215 Pfam PF00072 Response regulator receiver domain 5 116 2.0E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_00690 5869b779476f56766e369b173770a67d 215 SMART SM00448 3 116 1.3E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_00690 5869b779476f56766e369b173770a67d 215 SUPERFAMILY SSF52172 1 132 8.11E-32 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_13910 e58329e013afaf5676f7e8c0d9175ea4 251 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 53 93 - T 13-10-2018 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 BEN78_13910 e58329e013afaf5676f7e8c0d9175ea4 251 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 5 251 32.227 T 13-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 BEN78_13910 e58329e013afaf5676f7e8c0d9175ea4 251 SUPERFAMILY SSF53167 6 250 5.79E-71 T 13-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 BEN78_13910 e58329e013afaf5676f7e8c0d9175ea4 251 Gene3D G3DSA:3.40.50.1580 1 251 4.0E-76 T 13-10-2018 BEN78_13910 e58329e013afaf5676f7e8c0d9175ea4 251 Pfam PF01048 Phosphorylase superfamily 6 249 2.2E-42 T 13-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 BEN78_14200 5a33ffe8baa4dbbed6de35a60e63b8ad 361 Pfam PF01628 HrcA protein C terminal domain 111 329 1.1E-57 T 13-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 BEN78_14200 5a33ffe8baa4dbbed6de35a60e63b8ad 361 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 10 342 1.2E-96 T 13-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 BEN78_14200 5a33ffe8baa4dbbed6de35a60e63b8ad 361 SUPERFAMILY SSF55781 78 345 1.67E-60 T 13-10-2018 BEN78_14200 5a33ffe8baa4dbbed6de35a60e63b8ad 361 SUPERFAMILY SSF46785 9 91 1.06E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_14200 5a33ffe8baa4dbbed6de35a60e63b8ad 361 Gene3D G3DSA:3.30.390.60 134 234 1.8E-39 T 13-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily BEN78_14200 5a33ffe8baa4dbbed6de35a60e63b8ad 361 PIRSF PIRSF005485 6 346 2.0E-104 T 13-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 BEN78_14200 5a33ffe8baa4dbbed6de35a60e63b8ad 361 Gene3D G3DSA:1.10.10.10 1 91 2.1E-30 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_14200 5a33ffe8baa4dbbed6de35a60e63b8ad 361 Gene3D G3DSA:3.30.450.40 112 339 1.8E-39 T 13-10-2018 IPR029016 GAF-like domain superfamily BEN78_14200 5a33ffe8baa4dbbed6de35a60e63b8ad 361 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 8 336 27.16 T 13-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 BEN78_05140 118422ac4b237ee64dc30709b4915dfe 213 Pfam PF01389 OmpA-like transmembrane domain 46 180 6.4E-6 T 13-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 BEN78_05140 118422ac4b237ee64dc30709b4915dfe 213 Gene3D G3DSA:2.40.160.20 10 213 6.8E-17 T 13-10-2018 BEN78_05140 118422ac4b237ee64dc30709b4915dfe 213 SUPERFAMILY SSF56925 19 213 3.92E-11 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BEN78_13500 720baedcecaeb283156e67f968f3bbe7 68 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 63 1.6E-20 T 13-10-2018 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 BEN78_13500 720baedcecaeb283156e67f968f3bbe7 68 Pfam PF01361 Tautomerase enzyme 2 61 6.6E-18 T 13-10-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 BEN78_13500 720baedcecaeb283156e67f968f3bbe7 68 SUPERFAMILY SSF55331 2 65 2.96E-20 T 13-10-2018 IPR014347 Tautomerase/MIF superfamily BEN78_13500 720baedcecaeb283156e67f968f3bbe7 68 Gene3D G3DSA:3.30.429.10 2 65 1.9E-23 T 13-10-2018 IPR014347 Tautomerase/MIF superfamily BEN78_15600 58e60dfd8c30230a0fa86a358db5b4e9 140 PRINTS PR01021 OMPA domain signature 60 75 6.4E-9 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BEN78_15600 58e60dfd8c30230a0fa86a358db5b4e9 140 PRINTS PR01021 OMPA domain signature 28 50 6.4E-9 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BEN78_15600 58e60dfd8c30230a0fa86a358db5b4e9 140 PRINTS PR01021 OMPA domain signature 75 91 6.4E-9 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BEN78_15600 58e60dfd8c30230a0fa86a358db5b4e9 140 SUPERFAMILY SSF103088 19 135 2.49E-28 T 13-10-2018 IPR036737 OmpA-like domain superfamily BEN78_15600 58e60dfd8c30230a0fa86a358db5b4e9 140 Gene3D G3DSA:3.30.1330.60 1 140 8.3E-37 T 13-10-2018 IPR036737 OmpA-like domain superfamily BEN78_15600 58e60dfd8c30230a0fa86a358db5b4e9 140 Pfam PF00691 OmpA family 25 121 3.1E-21 T 13-10-2018 IPR006665 OmpA-like domain BEN78_15725 1e1358382e5702666faff1fbd2736faa 264 Gene3D G3DSA:2.40.30.10 1 97 9.0E-29 T 13-10-2018 BEN78_15725 1e1358382e5702666faff1fbd2736faa 264 Pfam PF00175 Oxidoreductase NAD-binding domain 113 233 2.7E-6 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 BEN78_15725 1e1358382e5702666faff1fbd2736faa 264 Pfam PF00970 Oxidoreductase FAD-binding domain 19 92 3.0E-7 T 13-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 BEN78_15725 1e1358382e5702666faff1fbd2736faa 264 SUPERFAMILY SSF63380 8 100 4.84E-25 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BEN78_15725 1e1358382e5702666faff1fbd2736faa 264 Gene3D G3DSA:3.40.50.80 101 260 3.7E-36 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BEN78_15725 1e1358382e5702666faff1fbd2736faa 264 SUPERFAMILY SSF52343 104 262 1.57E-35 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BEN78_15030 96bf333223de77fcc94bd8b5bffec1db 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 12 123 1.7E-36 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 BEN78_15030 96bf333223de77fcc94bd8b5bffec1db 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 382 4.8E-41 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 BEN78_15030 96bf333223de77fcc94bd8b5bffec1db 387 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 341 360 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 BEN78_15030 96bf333223de77fcc94bd8b5bffec1db 387 SUPERFAMILY SSF47203 232 385 4.19E-44 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 BEN78_15030 96bf333223de77fcc94bd8b5bffec1db 387 Gene3D G3DSA:2.40.110.10 126 238 2.0E-46 T 13-10-2018 BEN78_15030 96bf333223de77fcc94bd8b5bffec1db 387 Gene3D G3DSA:1.20.140.10 239 383 8.7E-44 T 13-10-2018 BEN78_15030 96bf333223de77fcc94bd8b5bffec1db 387 PIRSF PIRSF016578 11 109 0.078 T 13-10-2018 BEN78_15030 96bf333223de77fcc94bd8b5bffec1db 387 PIRSF PIRSF016578 138 386 4.4E-11 T 13-10-2018 BEN78_15030 96bf333223de77fcc94bd8b5bffec1db 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 127 222 7.9E-26 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 BEN78_15030 96bf333223de77fcc94bd8b5bffec1db 387 SUPERFAMILY SSF56645 5 247 1.57E-87 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 BEN78_15030 96bf333223de77fcc94bd8b5bffec1db 387 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 129 141 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 BEN78_15030 96bf333223de77fcc94bd8b5bffec1db 387 Gene3D G3DSA:1.10.540.10 2 125 2.6E-47 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 BEN78_10830 3e02a50ec1500e2f5b6a942a0c9d01cb 289 Pfam PF03668 P-loop ATPase protein family 8 288 2.7E-89 T 13-10-2018 IPR005337 RapZ-like family GO:0005524 BEN78_10830 3e02a50ec1500e2f5b6a942a0c9d01cb 289 SUPERFAMILY SSF52540 8 159 4.31E-13 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_10830 3e02a50ec1500e2f5b6a942a0c9d01cb 289 PIRSF PIRSF005052 6 289 3.1E-103 T 13-10-2018 IPR005337 RapZ-like family GO:0005524 BEN78_10830 3e02a50ec1500e2f5b6a942a0c9d01cb 289 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 5 289 37.868 T 13-10-2018 IPR005337 RapZ-like family GO:0005524 BEN78_12950 341c5db6f241e3fd935f2b40df9b478f 284 Gene3D G3DSA:2.60.120.10 21 280 3.2E-100 T 13-10-2018 IPR014710 RmlC-like jelly roll fold BEN78_12950 341c5db6f241e3fd935f2b40df9b478f 284 SUPERFAMILY SSF51182 10 284 7.65E-92 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily BEN78_12950 341c5db6f241e3fd935f2b40df9b478f 284 Pfam PF02678 Pirin 25 125 1.8E-37 T 13-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 BEN78_12950 341c5db6f241e3fd935f2b40df9b478f 284 PIRSF PIRSF006232 6 284 1.1E-99 T 13-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 BEN78_12950 341c5db6f241e3fd935f2b40df9b478f 284 Pfam PF05726 Pirin C-terminal cupin domain 180 284 5.8E-30 T 13-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 BEN78_12950 341c5db6f241e3fd935f2b40df9b478f 284 Gene3D G3DSA:2.60.120.10 147 254 3.2E-100 T 13-10-2018 IPR014710 RmlC-like jelly roll fold BEN78_00490 1841b5adf9e96203e7b771612c16a6b7 380 Gene3D G3DSA:3.30.70.360 179 292 9.5E-122 T 13-10-2018 BEN78_00490 1841b5adf9e96203e7b771612c16a6b7 380 SUPERFAMILY SSF53187 2 373 2.0E-62 T 13-10-2018 BEN78_00490 1841b5adf9e96203e7b771612c16a6b7 380 Gene3D G3DSA:3.40.630.10 7 362 9.5E-122 T 13-10-2018 BEN78_00490 1841b5adf9e96203e7b771612c16a6b7 380 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 97 135 - T 13-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 BEN78_00490 1841b5adf9e96203e7b771612c16a6b7 380 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 2 375 48.875 T 13-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 BEN78_00490 1841b5adf9e96203e7b771612c16a6b7 380 SUPERFAMILY SSF55031 179 286 1.2E-27 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain BEN78_00490 1841b5adf9e96203e7b771612c16a6b7 380 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 5 373 1.7E-160 T 13-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 BEN78_00490 1841b5adf9e96203e7b771612c16a6b7 380 Pfam PF07687 Peptidase dimerisation domain 175 279 3.3E-25 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain BEN78_00490 1841b5adf9e96203e7b771612c16a6b7 380 Pfam PF01546 Peptidase family M20/M25/M40 63 371 1.1E-39 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 BEN78_13965 73ddcd28b53e880ac9ea459c63ad6f8a 118 Pfam PF04994 TfoX C-terminal domain 5 78 3.0E-24 T 13-10-2018 IPR007077 TfoX, C-terminal BEN78_13965 73ddcd28b53e880ac9ea459c63ad6f8a 118 Gene3D G3DSA:1.10.150.20 3 86 1.6E-19 T 13-10-2018 BEN78_00835 31b8a83b04a4e4985647457c2943c2e0 389 Gene3D G3DSA:3.20.80.10 198 387 4.4E-10 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily BEN78_00835 31b8a83b04a4e4985647457c2943c2e0 389 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 30 175 8.0E-9 T 13-10-2018 IPR019587 Polyketide cyclase/dehydrase BEN78_00835 31b8a83b04a4e4985647457c2943c2e0 389 Gene3D G3DSA:3.30.530.20 25 178 3.0E-9 T 13-10-2018 IPR023393 START-like domain superfamily BEN78_00835 31b8a83b04a4e4985647457c2943c2e0 389 SUPERFAMILY SSF55136 309 369 9.16E-6 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily BEN78_00835 31b8a83b04a4e4985647457c2943c2e0 389 SUPERFAMILY SSF55961 26 174 5.5E-11 T 13-10-2018 BEN78_11330 d2c5b418a51ac90bfd744e18203e3a4f 357 Gene3D G3DSA:3.30.1330.60 237 357 1.7E-38 T 13-10-2018 IPR036737 OmpA-like domain superfamily BEN78_11330 d2c5b418a51ac90bfd744e18203e3a4f 357 SUPERFAMILY SSF103088 244 355 2.49E-35 T 13-10-2018 IPR036737 OmpA-like domain superfamily BEN78_11330 d2c5b418a51ac90bfd744e18203e3a4f 357 Pfam PF00691 OmpA family 247 338 2.6E-21 T 13-10-2018 IPR006665 OmpA-like domain BEN78_11330 d2c5b418a51ac90bfd744e18203e3a4f 357 Gene3D G3DSA:2.40.160.20 18 208 3.7E-28 T 13-10-2018 BEN78_11330 d2c5b418a51ac90bfd744e18203e3a4f 357 PRINTS PR01021 OMPA domain signature 248 270 7.4E-18 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BEN78_11330 d2c5b418a51ac90bfd744e18203e3a4f 357 PRINTS PR01021 OMPA domain signature 278 293 7.4E-18 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BEN78_11330 d2c5b418a51ac90bfd744e18203e3a4f 357 PRINTS PR01021 OMPA domain signature 293 309 7.4E-18 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BEN78_11330 d2c5b418a51ac90bfd744e18203e3a4f 357 SUPERFAMILY SSF56925 27 182 5.23E-18 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BEN78_11330 d2c5b418a51ac90bfd744e18203e3a4f 357 Pfam PF13505 Outer membrane protein beta-barrel domain 8 183 1.9E-18 T 13-10-2018 IPR027385 Outer membrane protein beta-barrel BEN78_15145 c18eb8d849c87bc0abd6a735191c56b2 124 Gene3D G3DSA:2.170.150.70 8 120 2.6E-22 T 13-10-2018 BEN78_15145 c18eb8d849c87bc0abd6a735191c56b2 124 SUPERFAMILY SSF51316 8 104 5.34E-17 T 13-10-2018 IPR011057 Mss4-like superfamily BEN78_09060 19c49ae78dad834a7f3b8b27dedf2f95 236 SUPERFAMILY SSF46894 130 228 3.97E-21 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BEN78_09060 19c49ae78dad834a7f3b8b27dedf2f95 236 Pfam PF00072 Response regulator receiver domain 10 121 1.4E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_09060 19c49ae78dad834a7f3b8b27dedf2f95 236 SUPERFAMILY SSF52172 6 131 4.41E-41 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_09060 19c49ae78dad834a7f3b8b27dedf2f95 236 SMART SM00448 8 120 9.0E-43 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_09060 19c49ae78dad834a7f3b8b27dedf2f95 236 SMART SM00862 154 228 6.5E-15 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN78_09060 19c49ae78dad834a7f3b8b27dedf2f95 236 Gene3D G3DSA:3.40.50.2300 3 129 6.4E-39 T 13-10-2018 BEN78_09060 19c49ae78dad834a7f3b8b27dedf2f95 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 228 1.0E-16 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN78_09060 19c49ae78dad834a7f3b8b27dedf2f95 236 Gene3D G3DSA:1.10.10.10 131 235 9.8E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_13545 46df6a6818edda4569d0c6420a7f664b 1116 Gene3D G3DSA:3.30.2080.10 480 956 3.2E-244 T 13-10-2018 BEN78_13545 46df6a6818edda4569d0c6420a7f664b 1116 SUPERFAMILY SSF48208 453 937 2.38E-15 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BEN78_13545 46df6a6818edda4569d0c6420a7f664b 1116 Pfam PF07971 Glycosyl hydrolase family 92 421 954 3.5E-144 T 13-10-2018 IPR012939 Glycosyl hydrolase family 92 BEN78_13545 46df6a6818edda4569d0c6420a7f664b 1116 Gene3D G3DSA:2.70.98.10 216 551 3.2E-244 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 BEN78_13545 46df6a6818edda4569d0c6420a7f664b 1116 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 211 956 4.8E-134 T 13-10-2018 IPR005887 Alpha-1,2-mannosidase, putative BEN78_13545 46df6a6818edda4569d0c6420a7f664b 1116 Gene3D G3DSA:1.20.1050.60 552 645 3.2E-244 T 13-10-2018 BEN78_13545 46df6a6818edda4569d0c6420a7f664b 1116 Gene3D G3DSA:1.20.1610.10 646 827 3.2E-244 T 13-10-2018 BEN78_04140 931d76c145637337d0bacfcd07c10c5e 137 Gene3D G3DSA:2.40.50.100 4 83 1.3E-21 T 13-10-2018 BEN78_04140 931d76c145637337d0bacfcd07c10c5e 137 Pfam PF00364 Biotin-requiring enzyme 6 77 2.7E-21 T 13-10-2018 IPR000089 Biotin/lipoyl attachment BEN78_04140 931d76c145637337d0bacfcd07c10c5e 137 SUPERFAMILY SSF51230 3 96 6.52E-24 T 13-10-2018 IPR011053 Single hybrid motif BEN78_04140 931d76c145637337d0bacfcd07c10c5e 137 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 BEN78_07810 6e30889144a2526d36d8c6b285063dff 674 Gene3D G3DSA:1.10.1370.40 14 669 5.4E-247 T 13-10-2018 BEN78_07810 6e30889144a2526d36d8c6b285063dff 674 SUPERFAMILY SSF55486 1 670 8.06E-188 T 13-10-2018 BEN78_07810 6e30889144a2526d36d8c6b285063dff 674 Gene3D G3DSA:1.10.1370.10 139 604 5.4E-247 T 13-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 BEN78_07810 6e30889144a2526d36d8c6b285063dff 674 Pfam PF01432 Peptidase family M3 222 671 5.9E-136 T 13-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 BEN78_13195 c1a4a2b5013e51d978662fe9724efc43 340 Pfam PF04055 Radical SAM superfamily 25 187 9.8E-27 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BEN78_13195 c1a4a2b5013e51d978662fe9724efc43 340 Gene3D G3DSA:3.20.20.70 11 340 1.4E-84 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_13195 c1a4a2b5013e51d978662fe9724efc43 340 Pfam PF06463 Molybdenum Cofactor Synthesis C 197 320 4.7E-32 T 13-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BEN78_13195 c1a4a2b5013e51d978662fe9724efc43 340 SMART SM00729 20 229 8.2E-5 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BEN78_13195 c1a4a2b5013e51d978662fe9724efc43 340 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 13 340 2.9E-102 T 13-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BEN78_13195 c1a4a2b5013e51d978662fe9724efc43 340 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 11 340 37.742 T 13-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BEN78_13195 c1a4a2b5013e51d978662fe9724efc43 340 SUPERFAMILY SSF102114 13 288 6.28E-70 T 13-10-2018 BEN78_13195 c1a4a2b5013e51d978662fe9724efc43 340 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 26 37 - T 13-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BEN78_13195 c1a4a2b5013e51d978662fe9724efc43 340 Pfam PF13353 4Fe-4S single cluster domain 28 113 6.2E-5 T 13-10-2018 BEN78_05275 6cf3b0a2135db25f69d7d709c0ae459f 148 Pfam PF02643 Uncharacterized ACR, COG1430 34 139 3.2E-30 T 13-10-2018 IPR003795 Protein of unknown function DUF192 BEN78_05275 6cf3b0a2135db25f69d7d709c0ae459f 148 Gene3D G3DSA:2.60.120.1140 23 145 3.9E-38 T 13-10-2018 IPR038695 Saro_0823-like superfamily BEN78_02455 593f12595b49d025dc92a9a9daf7e929 245 Pfam PF02390 Putative methyltransferase 72 239 7.9E-45 T 13-10-2018 BEN78_02455 593f12595b49d025dc92a9a9daf7e929 245 SUPERFAMILY SSF53335 23 241 3.88E-34 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_02455 593f12595b49d025dc92a9a9daf7e929 245 Gene3D G3DSA:3.40.50.150 37 244 4.8E-61 T 13-10-2018 BEN78_02455 593f12595b49d025dc92a9a9daf7e929 245 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 30 244 27.855 T 13-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 BEN78_02455 593f12595b49d025dc92a9a9daf7e929 245 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 55 242 2.5E-43 T 13-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 BEN78_09900 3a578a028bc7db1b9e3c2ca8594dc4b7 211 Gene3D G3DSA:2.150.10.10 1 55 3.9E-20 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_09900 3a578a028bc7db1b9e3c2ca8594dc4b7 211 Gene3D G3DSA:3.30.1300.30 111 211 2.2E-30 T 13-10-2018 BEN78_09900 3a578a028bc7db1b9e3c2ca8594dc4b7 211 SUPERFAMILY SSF54523 96 211 1.49E-23 T 13-10-2018 BEN78_09900 3a578a028bc7db1b9e3c2ca8594dc4b7 211 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 88 120 1.6E-6 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_09900 3a578a028bc7db1b9e3c2ca8594dc4b7 211 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 33 71 8.0E-10 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_09900 3a578a028bc7db1b9e3c2ca8594dc4b7 211 SUPERFAMILY SSF101967 77 106 4.18E-5 T 13-10-2018 BEN78_09900 3a578a028bc7db1b9e3c2ca8594dc4b7 211 SUPERFAMILY SSF101967 2 54 1.96E-16 T 13-10-2018 BEN78_09900 3a578a028bc7db1b9e3c2ca8594dc4b7 211 Pfam PF03895 YadA-like membrane anchor domain 151 211 2.1E-16 T 13-10-2018 IPR005594 YadA-like, C-terminal BEN78_09900 3a578a028bc7db1b9e3c2ca8594dc4b7 211 Gene3D G3DSA:2.150.10.10 56 107 4.8E-5 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_08180 67ea3fde946704846a7a81e041b116c5 140 Gene3D G3DSA:4.10.430.10 69 119 5.5E-17 T 13-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 BEN78_08180 67ea3fde946704846a7a81e041b116c5 140 SMART SM00528 72 117 7.6E-13 T 13-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 BEN78_08180 67ea3fde946704846a7a81e041b116c5 140 SUPERFAMILY SSF81273 74 117 3.33E-12 T 13-10-2018 BEN78_08180 67ea3fde946704846a7a81e041b116c5 140 Pfam PF00816 H-NS histone family 12 110 1.4E-19 T 13-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 BEN78_00560 74283f094ada757359ade4835da8aea0 300 Pfam PF00483 Nucleotidyl transferase 12 269 3.1E-32 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 BEN78_00560 74283f094ada757359ade4835da8aea0 300 SUPERFAMILY SSF53448 5 278 2.7E-66 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_00560 74283f094ada757359ade4835da8aea0 300 Gene3D G3DSA:3.90.550.10 1 292 8.9E-87 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_00560 74283f094ada757359ade4835da8aea0 300 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 5 268 1.5E-107 T 13-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 BEN78_02585 8c5c634bc6c6c1d18925b6818d25f7a0 257 Gene3D G3DSA:3.40.190.10 28 254 4.8E-76 T 13-10-2018 BEN78_02585 8c5c634bc6c6c1d18925b6818d25f7a0 257 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 32 253 2.5E-54 T 13-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 BEN78_02585 8c5c634bc6c6c1d18925b6818d25f7a0 257 PIRSF PIRSF004846 5 257 3.5E-62 T 13-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 BEN78_02585 8c5c634bc6c6c1d18925b6818d25f7a0 257 Gene3D G3DSA:3.40.190.10 105 217 4.8E-76 T 13-10-2018 BEN78_02585 8c5c634bc6c6c1d18925b6818d25f7a0 257 Pfam PF13531 Bacterial extracellular solute-binding protein 27 254 3.3E-46 T 13-10-2018 BEN78_02585 8c5c634bc6c6c1d18925b6818d25f7a0 257 SUPERFAMILY SSF53850 26 255 5.44E-62 T 13-10-2018 BEN78_07110 90320cee9d531bc32be87371176ea005 454 Gene3D G3DSA:3.30.590.20 3 454 3.3E-183 T 13-10-2018 BEN78_07110 90320cee9d531bc32be87371176ea005 454 PIRSF PIRSF017901 2 454 7.4E-187 T 13-10-2018 IPR035434 Glutamate--cysteine ligase, bacteria and plant GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 BEN78_07110 90320cee9d531bc32be87371176ea005 454 SUPERFAMILY SSF55931 25 452 1.08E-69 T 13-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 BEN78_07110 90320cee9d531bc32be87371176ea005 454 TIGRFAM TIGR01436 glu_cys_lig_pln: glutamate--cysteine ligase 11 454 1.9E-215 T 13-10-2018 IPR011556 Glutamate--cysteine ligase, plant-type GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 BEN78_07110 90320cee9d531bc32be87371176ea005 454 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 59 358 2.5E-97 T 13-10-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 BEN78_11720 fd74c0f01882880fc1420940743810b0 1302 Pfam PF09985 C-terminal binding-module, SLH-like, of glucodextranase 667 858 1.3E-19 T 13-10-2018 IPR019248 Glucodextranase-like, C-terminal BEN78_11720 fd74c0f01882880fc1420940743810b0 1302 SUPERFAMILY SSF49344 667 856 3.69E-23 T 13-10-2018 BEN78_11720 fd74c0f01882880fc1420940743810b0 1302 Gene3D G3DSA:2.130.10.10 982 1301 1.6E-96 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BEN78_11720 fd74c0f01882880fc1420940743810b0 1302 SMART SM00642 48 465 9.3E-66 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BEN78_11720 fd74c0f01882880fc1420940743810b0 1302 SUPERFAMILY SSF51004 991 1282 3.14E-40 T 13-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily BEN78_11720 fd74c0f01882880fc1420940743810b0 1302 Gene3D G3DSA:2.60.40.1190 665 912 4.2E-21 T 13-10-2018 BEN78_11720 fd74c0f01882880fc1420940743810b0 1302 Gene3D G3DSA:3.20.20.80 35 466 3.9E-100 T 13-10-2018 BEN78_11720 fd74c0f01882880fc1420940743810b0 1302 SUPERFAMILY SSF51011 487 561 5.45E-5 T 13-10-2018 BEN78_11720 fd74c0f01882880fc1420940743810b0 1302 Pfam PF00128 Alpha amylase, catalytic domain 80 432 3.6E-51 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BEN78_11720 fd74c0f01882880fc1420940743810b0 1302 SUPERFAMILY SSF51445 35 465 1.14E-76 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily BEN78_04400 236ae8069c22c2054c2431d5d9be33e1 304 Pfam PF02195 ParB-like nuclease domain 43 131 4.1E-28 T 13-10-2018 IPR003115 ParB/Sulfiredoxin BEN78_04400 236ae8069c22c2054c2431d5d9be33e1 304 SMART SM00470 41 131 2.4E-36 T 13-10-2018 IPR003115 ParB/Sulfiredoxin BEN78_04400 236ae8069c22c2054c2431d5d9be33e1 304 Gene3D G3DSA:3.90.1530.30 54 117 1.7E-28 T 13-10-2018 BEN78_04400 236ae8069c22c2054c2431d5d9be33e1 304 Gene3D G3DSA:1.10.10.2830 118 231 2.4E-36 T 13-10-2018 BEN78_04400 236ae8069c22c2054c2431d5d9be33e1 304 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 39 212 6.6E-61 T 13-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 BEN78_04400 236ae8069c22c2054c2431d5d9be33e1 304 SUPERFAMILY SSF110849 40 175 4.24E-33 T 13-10-2018 IPR036086 ParB/Sulfiredoxin superfamily BEN78_14455 ef1c6cd4bdad9abc34fcbbe458d35e4c 252 SUPERFAMILY SSF52540 1 240 2.66E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_14455 ef1c6cd4bdad9abc34fcbbe458d35e4c 252 PIRSF PIRSF003092 1 250 7.8E-64 T 13-10-2018 IPR025501 ATP binding protein MinD BEN78_14455 ef1c6cd4bdad9abc34fcbbe458d35e4c 252 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 1 203 1.4E-9 T 13-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain BEN78_14455 ef1c6cd4bdad9abc34fcbbe458d35e4c 252 Gene3D G3DSA:3.40.50.300 1 227 2.7E-45 T 13-10-2018 BEN78_14800 500143ab3795fd07d3da7cd7dc5de4ea 334 SUPERFAMILY SSF52151 7 310 1.73E-49 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BEN78_14800 500143ab3795fd07d3da7cd7dc5de4ea 334 Pfam PF01734 Patatin-like phospholipase 10 186 1.3E-24 T 13-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 BEN78_14800 500143ab3795fd07d3da7cd7dc5de4ea 334 Gene3D G3DSA:3.40.1090.10 2 320 2.5E-57 T 13-10-2018 BEN78_11550 7be32755585123237ad7d18bc18b441d 290 Gene3D G3DSA:3.30.420.10 117 281 2.5E-7 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BEN78_11550 7be32755585123237ad7d18bc18b441d 290 Pfam PF13482 RNase_H superfamily 119 287 1.3E-35 T 13-10-2018 IPR038720 YprB, ribonuclease H-like domain BEN78_11550 7be32755585123237ad7d18bc18b441d 290 SUPERFAMILY SSF53098 112 285 4.18E-23 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily BEN78_12625 5a0f23235c0c077d8365379a2d14c664 496 Pfam PF05872 Bacterial protein of unknown function (DUF853) 14 495 9.6E-207 T 13-10-2018 IPR033186 Helicase HerA-like C-terminal BEN78_12625 5a0f23235c0c077d8365379a2d14c664 496 Gene3D G3DSA:3.40.50.300 6 82 1.9E-9 T 13-10-2018 BEN78_12625 5a0f23235c0c077d8365379a2d14c664 496 Gene3D G3DSA:3.40.50.300 214 383 2.9E-19 T 13-10-2018 BEN78_12625 5a0f23235c0c077d8365379a2d14c664 496 SUPERFAMILY SSF52540 3 378 1.78E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_07215 fa8b4cd64d092b7d12496e95a9f9c6ef 271 Pfam PF01694 Rhomboid family 61 193 3.0E-16 T 13-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 BEN78_07215 fa8b4cd64d092b7d12496e95a9f9c6ef 271 SUPERFAMILY SSF144091 18 194 2.09E-24 T 13-10-2018 BEN78_07215 fa8b4cd64d092b7d12496e95a9f9c6ef 271 Gene3D G3DSA:1.20.1540.10 16 198 2.7E-13 T 13-10-2018 IPR035952 Rhomboid-like superfamily BEN78_13790 9e40dcc0d3176d8dc4baba71bc9d91e6 213 ProSitePatterns PS01331 Thymidylate kinase signature. 98 110 - T 13-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 BEN78_13790 9e40dcc0d3176d8dc4baba71bc9d91e6 213 Pfam PF02223 Thymidylate kinase 13 200 5.2E-46 T 13-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 BEN78_13790 9e40dcc0d3176d8dc4baba71bc9d91e6 213 Hamap MF_00165 Thymidylate kinase [tmk]. 9 210 27.611 T 13-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 BEN78_13790 9e40dcc0d3176d8dc4baba71bc9d91e6 213 SUPERFAMILY SSF52540 8 204 1.98E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_13790 9e40dcc0d3176d8dc4baba71bc9d91e6 213 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 10 200 3.3E-47 T 13-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 BEN78_13790 9e40dcc0d3176d8dc4baba71bc9d91e6 213 Gene3D G3DSA:3.40.50.300 8 210 1.8E-58 T 13-10-2018 BEN78_04060 9e545956cf2edbf123bb08f532bbb513 127 Pfam PF04138 GtrA-like protein 10 125 1.8E-15 T 13-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 BEN78_14320 6f0cadcafeafa2262fc2dd92695cbdf3 475 Pfam PF07396 Phosphate-selective porin O and P 117 475 1.4E-28 T 13-10-2018 IPR010870 Phosphate-selective porin O/P BEN78_14320 6f0cadcafeafa2262fc2dd92695cbdf3 475 SUPERFAMILY SSF56935 106 471 2.93E-8 T 13-10-2018 BEN78_14320 6f0cadcafeafa2262fc2dd92695cbdf3 475 Gene3D G3DSA:2.40.160.10 88 475 2.2E-65 T 13-10-2018 IPR023614 Porin domain superfamily BEN78_10580 5aa6204daaa2f2f679dabb1652c632ae 217 Pfam PF03006 Haemolysin-III related 12 206 1.3E-36 T 13-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 BEN78_10580 5aa6204daaa2f2f679dabb1652c632ae 217 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 13 212 9.3E-60 T 13-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 BEN78_04310 34e327427ba74f3d61a43200c5916fad 80 Pfam PF11730 Protein of unknown function (DUF3297) 6 76 2.2E-39 T 13-10-2018 IPR021724 Protein of unknown function DUF3297 BEN78_07895 70fa4e9b4ef71efbc00c03bd4b129b32 243 SUPERFAMILY SSF51735 6 241 3.45E-69 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_07895 70fa4e9b4ef71efbc00c03bd4b129b32 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 8.7E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_07895 70fa4e9b4ef71efbc00c03bd4b129b32 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 8.7E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_07895 70fa4e9b4ef71efbc00c03bd4b129b32 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 8.7E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_07895 70fa4e9b4ef71efbc00c03bd4b129b32 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 8.7E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_07895 70fa4e9b4ef71efbc00c03bd4b129b32 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 8.7E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_07895 70fa4e9b4ef71efbc00c03bd4b129b32 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 8.7E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_07895 70fa4e9b4ef71efbc00c03bd4b129b32 243 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 190 2.9E-6 T 13-10-2018 BEN78_07895 70fa4e9b4ef71efbc00c03bd4b129b32 243 Pfam PF00106 short chain dehydrogenase 6 197 1.9E-48 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_07895 70fa4e9b4ef71efbc00c03bd4b129b32 243 Gene3D G3DSA:3.40.50.720 5 243 8.5E-71 T 13-10-2018 BEN78_07895 70fa4e9b4ef71efbc00c03bd4b129b32 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 2.4E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_07895 70fa4e9b4ef71efbc00c03bd4b129b32 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 2.4E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_07895 70fa4e9b4ef71efbc00c03bd4b129b32 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.4E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_15970 5b2f62b53877586110f6f663dbbf4a47 772 Pfam PF01568 Molydopterin dinucleotide binding domain 645 730 4.4E-7 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 BEN78_15970 5b2f62b53877586110f6f663dbbf4a47 772 Gene3D G3DSA:3.40.228.10 182 456 1.8E-66 T 13-10-2018 BEN78_15970 5b2f62b53877586110f6f663dbbf4a47 772 Pfam PF00384 Molybdopterin oxidoreductase 110 413 1.3E-23 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_15970 5b2f62b53877586110f6f663dbbf4a47 772 SUPERFAMILY SSF53706 49 632 1.1E-128 T 13-10-2018 BEN78_15970 5b2f62b53877586110f6f663dbbf4a47 772 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 13 757 1.4E-283 T 13-10-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 BEN78_15970 5b2f62b53877586110f6f663dbbf4a47 772 SUPERFAMILY SSF50692 641 759 1.38E-14 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily BEN78_15970 5b2f62b53877586110f6f663dbbf4a47 772 PIRSF PIRSF000144 1 763 0.0 T 13-10-2018 BEN78_02330 17c2f0e493443b7724d66389166e1a2c 331 Gene3D G3DSA:1.10.1200.80 251 325 9.6E-10 T 13-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 BEN78_02330 17c2f0e493443b7724d66389166e1a2c 331 Pfam PF01207 Dihydrouridine synthase (Dus) 13 316 3.3E-103 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 BEN78_02330 17c2f0e493443b7724d66389166e1a2c 331 Gene3D G3DSA:3.20.20.70 7 248 3.5E-78 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_02330 17c2f0e493443b7724d66389166e1a2c 331 PIRSF PIRSF006621 1 327 3.4E-108 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 BEN78_02330 17c2f0e493443b7724d66389166e1a2c 331 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 13-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 BEN78_02330 17c2f0e493443b7724d66389166e1a2c 331 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 49.654 T 13-10-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 BEN78_02330 17c2f0e493443b7724d66389166e1a2c 331 SUPERFAMILY SSF51395 11 318 2.01E-90 T 13-10-2018 BEN78_02330 17c2f0e493443b7724d66389166e1a2c 331 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 318 8.8E-124 T 13-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 BEN78_10155 ce31d9045630f54b3a059f8e1681ca8b 411 SUPERFAMILY SSF111369 47 296 2.48E-21 T 13-10-2018 BEN78_10155 ce31d9045630f54b3a059f8e1681ca8b 411 Gene3D G3DSA:1.10.287.470 90 181 1.6E-73 T 13-10-2018 BEN78_10155 ce31d9045630f54b3a059f8e1681ca8b 411 Gene3D G3DSA:2.40.50.100 56 219 1.6E-73 T 13-10-2018 BEN78_10155 ce31d9045630f54b3a059f8e1681ca8b 411 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 36 316 1.0E-45 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BEN78_10155 ce31d9045630f54b3a059f8e1681ca8b 411 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 46 290 2.4E-19 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BEN78_10155 ce31d9045630f54b3a059f8e1681ca8b 411 Gene3D G3DSA:2.40.30.170 45 298 1.6E-73 T 13-10-2018 BEN78_10155 ce31d9045630f54b3a059f8e1681ca8b 411 Gene3D G3DSA:2.40.420.20 40 312 1.6E-73 T 13-10-2018 BEN78_05895 9bd01d9ea54e3799a9dd3a58b5d79a32 1150 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 7 1132 16.519 T 13-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 BEN78_05895 9bd01d9ea54e3799a9dd3a58b5d79a32 1150 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 8 805 1.2E-208 T 13-10-2018 BEN78_05895 9bd01d9ea54e3799a9dd3a58b5d79a32 1150 Gene3D G3DSA:3.40.50.10930 10 289 9.3E-58 T 13-10-2018 BEN78_05895 9bd01d9ea54e3799a9dd3a58b5d79a32 1150 Gene3D G3DSA:1.10.10.160 86 180 9.3E-58 T 13-10-2018 IPR013986 DExx box DNA helicase domain superfamily BEN78_05895 9bd01d9ea54e3799a9dd3a58b5d79a32 1150 SUPERFAMILY SSF52540 351 812 3.61E-72 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_05895 9bd01d9ea54e3799a9dd3a58b5d79a32 1150 Gene3D G3DSA:3.40.50.300 324 806 9.0E-136 T 13-10-2018 BEN78_05895 9bd01d9ea54e3799a9dd3a58b5d79a32 1150 SUPERFAMILY SSF52980 821 1116 1.82E-47 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 BEN78_05895 9bd01d9ea54e3799a9dd3a58b5d79a32 1150 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 8 1090 2.6E-303 T 13-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 BEN78_05895 9bd01d9ea54e3799a9dd3a58b5d79a32 1150 SUPERFAMILY SSF52540 8 334 3.03E-65 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_05895 9bd01d9ea54e3799a9dd3a58b5d79a32 1150 Gene3D G3DSA:1.10.486.10 456 666 9.0E-136 T 13-10-2018 BEN78_05895 9bd01d9ea54e3799a9dd3a58b5d79a32 1150 PIRSF PIRSF000980 7 1132 0.0 T 13-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 BEN78_06770 68885aaa216aa21029c6556c7f5504ed 195 Gene3D G3DSA:1.20.910.10 10 194 1.0E-25 T 13-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 BEN78_06770 68885aaa216aa21029c6556c7f5504ed 195 SUPERFAMILY SSF48613 15 181 5.4E-23 T 13-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 BEN78_00210 34ce4be94d5711afe18a116880351da5 688 Gene3D G3DSA:2.40.170.20 50 688 5.9E-127 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_00210 34ce4be94d5711afe18a116880351da5 688 SUPERFAMILY SSF56935 38 688 7.85E-104 T 13-10-2018 BEN78_00210 34ce4be94d5711afe18a116880351da5 688 Pfam PF00593 TonB dependent receptor 255 687 4.8E-37 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_00210 34ce4be94d5711afe18a116880351da5 688 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 164 2.8E-17 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_07970 829dcc2fe96f3c40055bff24d53804d7 335 Gene3D G3DSA:3.40.50.2300 57 307 1.5E-71 T 13-10-2018 BEN78_07970 829dcc2fe96f3c40055bff24d53804d7 335 Gene3D G3DSA:1.10.260.40 1 56 1.5E-20 T 13-10-2018 BEN78_07970 829dcc2fe96f3c40055bff24d53804d7 335 SUPERFAMILY SSF47413 2 60 1.53E-15 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN78_07970 829dcc2fe96f3c40055bff24d53804d7 335 SMART SM00354 2 72 7.4E-22 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN78_07970 829dcc2fe96f3c40055bff24d53804d7 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 48 1.8E-16 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN78_07970 829dcc2fe96f3c40055bff24d53804d7 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 7.1E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN78_07970 829dcc2fe96f3c40055bff24d53804d7 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 7.1E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN78_07970 829dcc2fe96f3c40055bff24d53804d7 335 SUPERFAMILY SSF53822 63 333 1.99E-70 T 13-10-2018 IPR028082 Periplasmic binding protein-like I BEN78_07970 829dcc2fe96f3c40055bff24d53804d7 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 13-10-2018 BEN78_07970 829dcc2fe96f3c40055bff24d53804d7 335 Pfam PF13377 Periplasmic binding protein-like domain 171 330 7.2E-38 T 13-10-2018 BEN78_07970 829dcc2fe96f3c40055bff24d53804d7 335 Gene3D G3DSA:3.40.50.2300 162 291 1.5E-71 T 13-10-2018 BEN78_13255 4b9f2c7040756be29fe188049a365753 1885 Gene3D G3DSA:3.40.50.300 1339 1520 5.8E-21 T 13-10-2018 BEN78_13255 4b9f2c7040756be29fe188049a365753 1885 Gene3D G3DSA:3.40.50.300 332 584 7.6E-16 T 13-10-2018 BEN78_13255 4b9f2c7040756be29fe188049a365753 1885 Gene3D G3DSA:3.40.50.300 1176 1308 5.4E-13 T 13-10-2018 BEN78_13255 4b9f2c7040756be29fe188049a365753 1885 Pfam PF13195 Protein of unknown function (DUF4011) 36 243 8.8E-39 T 13-10-2018 IPR025103 Protein of unknown function DUF4011 BEN78_13255 4b9f2c7040756be29fe188049a365753 1885 Pfam PF13086 AAA domain 1253 1292 3.9E-8 T 13-10-2018 BEN78_13255 4b9f2c7040756be29fe188049a365753 1885 Pfam PF11784 Protein of unknown function (DUF3320) 1718 1765 7.0E-15 T 13-10-2018 IPR021754 Protein of unknown function DUF3320 BEN78_13255 4b9f2c7040756be29fe188049a365753 1885 Gene3D G3DSA:3.40.960.10 1553 1659 7.7E-14 T 13-10-2018 BEN78_13255 4b9f2c7040756be29fe188049a365753 1885 SUPERFAMILY SSF52980 1553 1658 1.18E-14 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 BEN78_13255 4b9f2c7040756be29fe188049a365753 1885 Pfam PF13087 AAA domain 1328 1511 1.3E-8 T 13-10-2018 BEN78_13255 4b9f2c7040756be29fe188049a365753 1885 SUPERFAMILY SSF52540 354 1511 5.07E-31 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_15205 ec5cd6ee1706744d2e07ab4681f656d9 232 SUPERFAMILY SSF56091 21 229 3.08E-39 T 13-10-2018 BEN78_15205 ec5cd6ee1706744d2e07ab4681f656d9 232 Gene3D G3DSA:3.30.470.30 22 197 3.3E-33 T 13-10-2018 BEN78_15205 ec5cd6ee1706744d2e07ab4681f656d9 232 Pfam PF09414 RNA ligase 41 194 3.6E-28 T 13-10-2018 IPR021122 RNA ligase domain, REL/Rln2 BEN78_00670 3d7050586609e5021d7978ce67a864d5 130 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 51 128 1.3E-22 T 13-10-2018 IPR037682 TonB, C-terminal GO:0055085 BEN78_00670 3d7050586609e5021d7978ce67a864d5 130 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 52 128 6.7E-20 T 13-10-2018 IPR006260 TonB/TolA, C-terminal BEN78_00670 3d7050586609e5021d7978ce67a864d5 130 SUPERFAMILY SSF74653 47 126 5.76E-24 T 13-10-2018 BEN78_00670 3d7050586609e5021d7978ce67a864d5 130 Gene3D G3DSA:3.30.1150.10 30 129 6.9E-27 T 13-10-2018 BEN78_12855 a1e8e30c01c41fe93eae91ffcb82ea89 120 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 7 114 1.6E-26 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 BEN78_12855 a1e8e30c01c41fe93eae91ffcb82ea89 120 ProSitePatterns PS01319 Ribosome-binding factor A signature. 76 97 - T 13-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 BEN78_12855 a1e8e30c01c41fe93eae91ffcb82ea89 120 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 7 110 24.576 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 BEN78_12855 a1e8e30c01c41fe93eae91ffcb82ea89 120 Gene3D G3DSA:3.30.300.20 3 105 9.2E-29 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta BEN78_12855 a1e8e30c01c41fe93eae91ffcb82ea89 120 Pfam PF02033 Ribosome-binding factor A 8 110 1.6E-28 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 BEN78_12855 a1e8e30c01c41fe93eae91ffcb82ea89 120 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 10 97 5.0E-33 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 BEN78_12855 a1e8e30c01c41fe93eae91ffcb82ea89 120 SUPERFAMILY SSF89919 5 113 5.36E-29 T 13-10-2018 IPR023799 Ribosome-binding factor A domain superfamily BEN78_08525 164487668ba6728834a1664b1d675cdb 429 Gene3D G3DSA:3.40.50.1100 91 396 4.1E-112 T 13-10-2018 BEN78_08525 164487668ba6728834a1664b1d675cdb 429 Pfam PF14821 Threonine synthase N terminus 3 76 1.8E-10 T 13-10-2018 IPR029144 Threonine synthase, N-terminal BEN78_08525 164487668ba6728834a1664b1d675cdb 429 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 95 377 1.0E-25 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BEN78_08525 164487668ba6728834a1664b1d675cdb 429 Gene3D G3DSA:3.90.1380.10 1 80 1.1E-12 T 13-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily BEN78_08525 164487668ba6728834a1664b1d675cdb 429 Gene3D G3DSA:3.40.50.1100 100 403 4.1E-112 T 13-10-2018 BEN78_08525 164487668ba6728834a1664b1d675cdb 429 SUPERFAMILY SSF53686 1 429 2.75E-113 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BEN78_08525 164487668ba6728834a1664b1d675cdb 429 TIGRFAM TIGR00260 thrC: threonine synthase 74 396 1.4E-67 T 13-10-2018 IPR004450 Threonine synthase-like BEN78_04175 89e7846dbc608e7d6e683677f71c3b86 160 Gene3D G3DSA:3.30.70.990 9 94 1.7E-30 T 13-10-2018 IPR035570 UPF0234, N-terminal BEN78_04175 89e7846dbc608e7d6e683677f71c3b86 160 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 160 27.773 T 13-10-2018 IPR007551 Protein of unknown function DUF520 BEN78_04175 89e7846dbc608e7d6e683677f71c3b86 160 Pfam PF04461 Protein of unknown function (DUF520) 2 159 5.7E-61 T 13-10-2018 IPR007551 Protein of unknown function DUF520 BEN78_04175 89e7846dbc608e7d6e683677f71c3b86 160 SUPERFAMILY SSF89963 89 160 6.02E-27 T 13-10-2018 IPR036183 YajQ-like superfamily BEN78_04175 89e7846dbc608e7d6e683677f71c3b86 160 Gene3D G3DSA:3.30.70.860 95 160 2.8E-29 T 13-10-2018 IPR035571 UPF0234-like, C-terminal BEN78_04175 89e7846dbc608e7d6e683677f71c3b86 160 SUPERFAMILY SSF89963 2 82 4.45E-29 T 13-10-2018 IPR036183 YajQ-like superfamily BEN78_12970 8656f9685066c120c19c24f07bdd53d4 295 Pfam PF14485 Domain of unknown function (DUF4431) 137 159 4.3E-7 T 13-10-2018 IPR027826 Domain of unknown function DUF4431 BEN78_10795 2f55b6bbece06ae18af4bd1db10bc776 465 Gene3D G3DSA:1.20.1740.10 19 461 1.4E-72 T 13-10-2018 BEN78_10795 2f55b6bbece06ae18af4bd1db10bc776 465 ProSitePatterns PS00218 Amino acid permeases signature. 51 81 - T 13-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 BEN78_10795 2f55b6bbece06ae18af4bd1db10bc776 465 PIRSF PIRSF006060 16 457 1.0E-69 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BEN78_10795 2f55b6bbece06ae18af4bd1db10bc776 465 Pfam PF00324 Amino acid permease 27 445 4.1E-94 T 13-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 BEN78_16090 c73a662b00e7e1b7c23ca18078d4e9c2 165 Pfam PF05751 FixH 9 150 1.4E-17 T 13-10-2018 IPR008620 Nitrogen fixation protein FixH BEN78_00540 25549042f446a2e5db50b596222c61b6 261 SUPERFAMILY SSF52313 6 230 2.75E-93 T 13-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily BEN78_00540 25549042f446a2e5db50b596222c61b6 261 Pfam PF00318 Ribosomal protein S2 9 224 3.5E-94 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_00540 25549042f446a2e5db50b596222c61b6 261 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.264 T 13-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_00540 25549042f446a2e5db50b596222c61b6 261 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 226 8.8E-102 T 13-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_00540 25549042f446a2e5db50b596222c61b6 261 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 13-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 BEN78_00540 25549042f446a2e5db50b596222c61b6 261 PRINTS PR00395 Ribosomal protein S2 signature 158 175 7.4E-38 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_00540 25549042f446a2e5db50b596222c61b6 261 PRINTS PR00395 Ribosomal protein S2 signature 87 104 7.4E-38 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_00540 25549042f446a2e5db50b596222c61b6 261 PRINTS PR00395 Ribosomal protein S2 signature 196 210 7.4E-38 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_00540 25549042f446a2e5db50b596222c61b6 261 PRINTS PR00395 Ribosomal protein S2 signature 37 46 7.4E-38 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_00540 25549042f446a2e5db50b596222c61b6 261 PRINTS PR00395 Ribosomal protein S2 signature 6 24 7.4E-38 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_00540 25549042f446a2e5db50b596222c61b6 261 PRINTS PR00395 Ribosomal protein S2 signature 175 186 7.4E-38 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_00540 25549042f446a2e5db50b596222c61b6 261 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 13-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 BEN78_00540 25549042f446a2e5db50b596222c61b6 261 Gene3D G3DSA:1.10.287.610 100 151 1.1E-21 T 13-10-2018 BEN78_03100 a277f721621183ff68830be21adc41dd 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 248 5.6E-58 T 13-10-2018 BEN78_03100 a277f721621183ff68830be21adc41dd 251 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 5 251 1.6E-126 T 13-10-2018 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.127|MetaCyc: PWY-6507|MetaCyc: PWY-7562 BEN78_03100 a277f721621183ff68830be21adc41dd 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.4E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_03100 a277f721621183ff68830be21adc41dd 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.4E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_03100 a277f721621183ff68830be21adc41dd 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.4E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_03100 a277f721621183ff68830be21adc41dd 251 Gene3D G3DSA:3.40.50.720 1 251 1.7E-78 T 13-10-2018 BEN78_03100 a277f721621183ff68830be21adc41dd 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 5.4E-43 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_03100 a277f721621183ff68830be21adc41dd 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 5.4E-43 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_03100 a277f721621183ff68830be21adc41dd 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 5.4E-43 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_03100 a277f721621183ff68830be21adc41dd 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 5.4E-43 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_03100 a277f721621183ff68830be21adc41dd 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 5.4E-43 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_03100 a277f721621183ff68830be21adc41dd 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 5.4E-43 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_03100 a277f721621183ff68830be21adc41dd 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BEN78_03100 a277f721621183ff68830be21adc41dd 251 SUPERFAMILY SSF51735 5 250 4.87E-77 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_04735 2a108d92c443f8763b9c485a9fb8586e 244 SUPERFAMILY SSF51735 7 243 5.67E-69 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_04735 2a108d92c443f8763b9c485a9fb8586e 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 5.9E-52 T 13-10-2018 BEN78_04735 2a108d92c443f8763b9c485a9fb8586e 244 Gene3D G3DSA:3.40.50.720 3 244 1.2E-69 T 13-10-2018 BEN78_04735 2a108d92c443f8763b9c485a9fb8586e 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 3.6E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_04735 2a108d92c443f8763b9c485a9fb8586e 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 3.6E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_04735 2a108d92c443f8763b9c485a9fb8586e 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 3.6E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_04735 2a108d92c443f8763b9c485a9fb8586e 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.6E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_04735 2a108d92c443f8763b9c485a9fb8586e 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 3.6E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_04735 2a108d92c443f8763b9c485a9fb8586e 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 3.6E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_04735 2a108d92c443f8763b9c485a9fb8586e 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.6E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_04735 2a108d92c443f8763b9c485a9fb8586e 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.6E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_04735 2a108d92c443f8763b9c485a9fb8586e 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.6E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_04735 2a108d92c443f8763b9c485a9fb8586e 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BEN78_08760 499746a12ce2a6e1d995ae01913f0092 369 Pfam PF13930 DNA/RNA non-specific endonuclease 221 353 4.5E-14 T 13-10-2018 BEN78_02565 b39889571031384360069f41b45ae755 205 SUPERFAMILY SSF56925 24 199 2.88E-19 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BEN78_02565 b39889571031384360069f41b45ae755 205 Pfam PF03922 OmpW family 25 205 1.0E-41 T 13-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 BEN78_02565 b39889571031384360069f41b45ae755 205 Gene3D G3DSA:2.40.160.20 23 205 1.5E-51 T 13-10-2018 BEN78_03550 76bc39fc8446882956e14964982a144c 668 Pfam PF05649 Peptidase family M13 45 414 1.0E-75 T 13-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 BEN78_03550 76bc39fc8446882956e14964982a144c 668 SUPERFAMILY SSF55486 30 668 7.32E-159 T 13-10-2018 BEN78_03550 76bc39fc8446882956e14964982a144c 668 Gene3D G3DSA:1.10.1380.10 71 453 1.5E-182 T 13-10-2018 BEN78_03550 76bc39fc8446882956e14964982a144c 668 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 476 488 3.6E-12 T 13-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BEN78_03550 76bc39fc8446882956e14964982a144c 668 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 568 579 3.6E-12 T 13-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BEN78_03550 76bc39fc8446882956e14964982a144c 668 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 497 513 3.6E-12 T 13-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BEN78_03550 76bc39fc8446882956e14964982a144c 668 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 458 470 3.6E-12 T 13-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BEN78_03550 76bc39fc8446882956e14964982a144c 668 Gene3D G3DSA:3.40.390.10 40 668 1.5E-182 T 13-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 BEN78_03550 76bc39fc8446882956e14964982a144c 668 Pfam PF01431 Peptidase family M13 466 661 7.0E-53 T 13-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BEN78_07180 14b531a159b9b53226419778e32aa9f4 303 Pfam PF12833 Helix-turn-helix domain 219 297 1.2E-17 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BEN78_07180 14b531a159b9b53226419778e32aa9f4 303 SUPERFAMILY SSF46689 196 246 2.69E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN78_07180 14b531a159b9b53226419778e32aa9f4 303 Pfam PF12852 Cupin 3 179 4.2E-25 T 13-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain BEN78_07180 14b531a159b9b53226419778e32aa9f4 303 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 250 292 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BEN78_07180 14b531a159b9b53226419778e32aa9f4 303 SUPERFAMILY SSF46689 249 299 1.12E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN78_07180 14b531a159b9b53226419778e32aa9f4 303 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 198 242 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BEN78_07180 14b531a159b9b53226419778e32aa9f4 303 SMART SM00342 213 296 2.1E-26 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BEN78_07180 14b531a159b9b53226419778e32aa9f4 303 Gene3D G3DSA:1.10.10.60 193 302 2.5E-24 T 13-10-2018 BEN78_08640 c9ccf88b0936986a2b0ba813e4614597 189 Gene3D G3DSA:3.40.50.1390 3 127 9.2E-45 T 13-10-2018 BEN78_08640 c9ccf88b0936986a2b0ba813e4614597 189 ProSitePatterns PS00398 Site-specific recombinases signature 2. 57 69 - T 13-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 BEN78_08640 c9ccf88b0936986a2b0ba813e4614597 189 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 13-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 BEN78_08640 c9ccf88b0936986a2b0ba813e4614597 189 Pfam PF00239 Resolvase, N terminal domain 4 138 5.3E-45 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 BEN78_08640 c9ccf88b0936986a2b0ba813e4614597 189 SUPERFAMILY SSF53041 1 138 1.96E-44 T 13-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 BEN78_08640 c9ccf88b0936986a2b0ba813e4614597 189 SMART SM00857 3 138 7.0E-58 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 BEN78_03580 f24cffec972d0efe3b16db5333ff7bf8 291 Hamap MF_01972 Tryptophan 2,3-dioxygenase [kynA]. 17 282 38.701 T 13-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 BEN78_03580 f24cffec972d0efe3b16db5333ff7bf8 291 SUPERFAMILY SSF140959 23 282 4.71E-97 T 13-10-2018 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like GO:0019441|GO:0020037|GO:0046872 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 BEN78_03580 f24cffec972d0efe3b16db5333ff7bf8 291 Gene3D G3DSA:1.20.58.480 21 288 9.3E-103 T 13-10-2018 BEN78_03580 f24cffec972d0efe3b16db5333ff7bf8 291 Pfam PF03301 Tryptophan 2,3-dioxygenase 205 282 2.9E-22 T 13-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 BEN78_03580 f24cffec972d0efe3b16db5333ff7bf8 291 Pfam PF03301 Tryptophan 2,3-dioxygenase 15 144 1.8E-43 T 13-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 BEN78_15870 9c8188e286fd5f1a09d3f99d94d26ab3 224 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 13-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BEN78_15870 9c8188e286fd5f1a09d3f99d94d26ab3 224 Pfam PF00484 Carbonic anhydrase 37 189 4.5E-48 T 13-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BEN78_15870 9c8188e286fd5f1a09d3f99d94d26ab3 224 SMART SM00947 30 193 2.9E-64 T 13-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BEN78_15870 9c8188e286fd5f1a09d3f99d94d26ab3 224 Gene3D G3DSA:3.40.1050.10 1 210 2.0E-79 T 13-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 BEN78_15870 9c8188e286fd5f1a09d3f99d94d26ab3 224 SUPERFAMILY SSF53056 2 210 9.94E-72 T 13-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 BEN78_15870 9c8188e286fd5f1a09d3f99d94d26ab3 224 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 13-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BEN78_01055 7d7901a7250a1e05a885e33d35a435ef 461 Gene3D G3DSA:3.30.2290.10 10 245 2.1E-80 T 13-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal BEN78_01055 7d7901a7250a1e05a885e33d35a435ef 461 Pfam PF01523 Putative modulator of DNA gyrase 40 337 9.2E-60 T 13-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 BEN78_01055 7d7901a7250a1e05a885e33d35a435ef 461 SUPERFAMILY SSF111283 22 460 1.57E-119 T 13-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 BEN78_01895 4e2b1abe79741d60330124d391817743 743 Gene3D G3DSA:2.170.130.10 29 172 1.8E-43 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_01895 4e2b1abe79741d60330124d391817743 743 SUPERFAMILY SSF56935 38 743 9.39E-123 T 13-10-2018 BEN78_01895 4e2b1abe79741d60330124d391817743 743 Pfam PF00593 TonB dependent receptor 281 740 3.0E-57 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_01895 4e2b1abe79741d60330124d391817743 743 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 55 743 3.4E-83 T 13-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 BEN78_01895 4e2b1abe79741d60330124d391817743 743 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 167 5.0E-28 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_01895 4e2b1abe79741d60330124d391817743 743 Gene3D G3DSA:2.40.170.20 178 743 1.8E-181 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_01895 4e2b1abe79741d60330124d391817743 743 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 726 743 - T 13-10-2018 IPR010917 TonB-dependent receptor, conserved site BEN78_07130 2e839ef781118d66d0360afd5dbd9def 114 Gene3D G3DSA:1.20.1440.40 13 110 1.6E-10 T 13-10-2018 IPR036814 YqcC-like superfamily BEN78_07130 2e839ef781118d66d0360afd5dbd9def 114 SUPERFAMILY SSF158452 17 111 6.41E-17 T 13-10-2018 IPR036814 YqcC-like superfamily BEN78_07130 2e839ef781118d66d0360afd5dbd9def 114 Pfam PF04287 tRNA pseudouridine synthase C 19 108 4.9E-11 T 13-10-2018 IPR023376 YqcC-like domain BEN78_14415 d1ae52c375ad6ef797f6be109a3cd063 121 Gene3D G3DSA:2.30.30.40 65 107 4.6E-21 T 13-10-2018 BEN78_14415 d1ae52c375ad6ef797f6be109a3cd063 121 Pfam PF01584 CheW-like domain 5 114 9.8E-21 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BEN78_14415 d1ae52c375ad6ef797f6be109a3cd063 121 Gene3D G3DSA:2.40.50.180 4 108 4.6E-21 T 13-10-2018 BEN78_14415 d1ae52c375ad6ef797f6be109a3cd063 121 SMART SM00260 1 113 3.6E-4 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BEN78_14415 d1ae52c375ad6ef797f6be109a3cd063 121 SUPERFAMILY SSF50341 4 116 4.05E-21 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 BEN78_14110 20d32dfb40d986a74cc8637c7dee3894 440 Gene3D G3DSA:3.65.10.10 16 427 7.7E-149 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 BEN78_14110 20d32dfb40d986a74cc8637c7dee3894 440 PIRSF PIRSF000505 4 440 9.8E-116 T 13-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 BEN78_14110 20d32dfb40d986a74cc8637c7dee3894 440 SUPERFAMILY SSF55205 7 434 1.31E-123 T 13-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 BEN78_14110 20d32dfb40d986a74cc8637c7dee3894 440 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 10 427 1.2E-112 T 13-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 BEN78_14110 20d32dfb40d986a74cc8637c7dee3894 440 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 16 430 9.2E-120 T 13-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 BEN78_14110 20d32dfb40d986a74cc8637c7dee3894 440 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 12 436 31.783 T 13-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 BEN78_14110 20d32dfb40d986a74cc8637c7dee3894 440 Gene3D G3DSA:3.65.10.10 24 233 7.7E-149 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 BEN78_14110 20d32dfb40d986a74cc8637c7dee3894 440 ProSitePatterns PS00885 EPSP synthase signature 2. 343 361 - T 13-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 BEN78_14110 20d32dfb40d986a74cc8637c7dee3894 440 ProSitePatterns PS00104 EPSP synthase signature 1. 91 105 - T 13-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 BEN78_13555 63ec39731a183b2d979a656942a93f76 478 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 357 465 2.1E-34 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 BEN78_13555 63ec39731a183b2d979a656942a93f76 478 SUPERFAMILY SSF55424 354 475 3.61E-39 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BEN78_13555 63ec39731a183b2d979a656942a93f76 478 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 46 56 - T 13-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 BEN78_13555 63ec39731a183b2d979a656942a93f76 478 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 475 8.9E-152 T 13-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 BEN78_13555 63ec39731a183b2d979a656942a93f76 478 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 338 1.1E-66 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BEN78_13555 63ec39731a183b2d979a656942a93f76 478 SUPERFAMILY SSF51905 1 347 3.89E-60 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_13555 63ec39731a183b2d979a656942a93f76 478 PIRSF PIRSF000350 1 474 4.8E-77 T 13-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 BEN78_13555 63ec39731a183b2d979a656942a93f76 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 5.4E-70 T 13-10-2018 BEN78_13555 63ec39731a183b2d979a656942a93f76 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 183 208 5.4E-70 T 13-10-2018 BEN78_13555 63ec39731a183b2d979a656942a93f76 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 418 433 5.4E-70 T 13-10-2018 BEN78_13555 63ec39731a183b2d979a656942a93f76 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 45 60 5.4E-70 T 13-10-2018 BEN78_13555 63ec39731a183b2d979a656942a93f76 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 156 5.4E-70 T 13-10-2018 BEN78_13555 63ec39731a183b2d979a656942a93f76 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 275 289 5.4E-70 T 13-10-2018 BEN78_13555 63ec39731a183b2d979a656942a93f76 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 353 374 5.4E-70 T 13-10-2018 BEN78_13555 63ec39731a183b2d979a656942a93f76 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 318 325 5.4E-70 T 13-10-2018 BEN78_13555 63ec39731a183b2d979a656942a93f76 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 440 460 5.4E-70 T 13-10-2018 BEN78_13555 63ec39731a183b2d979a656942a93f76 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 183 201 7.3E-35 T 13-10-2018 BEN78_13555 63ec39731a183b2d979a656942a93f76 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 303 325 7.3E-35 T 13-10-2018 BEN78_13555 63ec39731a183b2d979a656942a93f76 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 274 290 7.3E-35 T 13-10-2018 BEN78_13555 63ec39731a183b2d979a656942a93f76 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 7.3E-35 T 13-10-2018 BEN78_13555 63ec39731a183b2d979a656942a93f76 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 7.3E-35 T 13-10-2018 BEN78_13555 63ec39731a183b2d979a656942a93f76 478 Gene3D G3DSA:3.50.50.60 163 288 1.5E-107 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_13555 63ec39731a183b2d979a656942a93f76 478 Gene3D G3DSA:3.30.390.30 356 476 1.9E-43 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BEN78_13555 63ec39731a183b2d979a656942a93f76 478 Gene3D G3DSA:3.50.50.60 5 343 1.5E-107 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_14325 46082b05f2f5c1d0013f807612e17e28 84 Gene3D G3DSA:2.10.260.10 2 41 2.5E-11 T 13-10-2018 BEN78_14325 46082b05f2f5c1d0013f807612e17e28 84 SUPERFAMILY SSF89447 2 43 1.92E-10 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily BEN78_14325 46082b05f2f5c1d0013f807612e17e28 84 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 3 43 2.5E-12 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 BEN78_14325 46082b05f2f5c1d0013f807612e17e28 84 SMART SM00966 3 48 8.9E-10 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 BEN78_14325 46082b05f2f5c1d0013f807612e17e28 84 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 6 42 2.8E-8 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 BEN78_12460 866ac01883cc22f2f2c2b633b748d49b 456 SMART SM00962 100 296 9.5E-115 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BEN78_12460 866ac01883cc22f2f2c2b633b748d49b 456 Gene3D G3DSA:1.20.120.140 5 306 2.3E-120 T 13-10-2018 BEN78_12460 866ac01883cc22f2f2c2b633b748d49b 456 SMART SM00963 1 86 1.1E-34 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BEN78_12460 866ac01883cc22f2f2c2b633b748d49b 456 Gene3D G3DSA:1.10.260.30 328 452 2.7E-40 T 13-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 BEN78_12460 866ac01883cc22f2f2c2b633b748d49b 456 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BEN78_12460 866ac01883cc22f2f2c2b633b748d49b 456 SMART SM00382 99 301 1.7E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_12460 866ac01883cc22f2f2c2b633b748d49b 456 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 447 34.053 T 13-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 BEN78_12460 866ac01883cc22f2f2c2b633b748d49b 456 Pfam PF00448 SRP54-type protein, GTPase domain 100 295 4.1E-74 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BEN78_12460 866ac01883cc22f2f2c2b633b748d49b 456 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 4.0E-177 T 13-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 BEN78_12460 866ac01883cc22f2f2c2b633b748d49b 456 SUPERFAMILY SSF47446 298 431 7.06E-44 T 13-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 BEN78_12460 866ac01883cc22f2f2c2b633b748d49b 456 SUPERFAMILY SSF52540 42 352 3.26E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_12460 866ac01883cc22f2f2c2b633b748d49b 456 Gene3D G3DSA:3.40.50.300 90 285 2.3E-120 T 13-10-2018 BEN78_12460 866ac01883cc22f2f2c2b633b748d49b 456 Pfam PF02978 Signal peptide binding domain 328 428 1.2E-32 T 13-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 BEN78_12460 866ac01883cc22f2f2c2b633b748d49b 456 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 6.9E-20 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BEN78_02780 af127bec5a60ddc6e966a32278d5a5cd 490 Gene3D G3DSA:3.40.1670.10 336 453 6.8E-48 T 13-10-2018 BEN78_02780 af127bec5a60ddc6e966a32278d5a5cd 490 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 8 430 8.3E-144 T 13-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 BEN78_02780 af127bec5a60ddc6e966a32278d5a5cd 490 SUPERFAMILY SSF50475 2 319 2.35E-100 T 13-10-2018 BEN78_02780 af127bec5a60ddc6e966a32278d5a5cd 490 SUPERFAMILY SSF143968 323 484 2.62E-60 T 13-10-2018 BEN78_02780 af127bec5a60ddc6e966a32278d5a5cd 490 Gene3D G3DSA:1.20.5.570 454 490 3.3E-11 T 13-10-2018 BEN78_02780 af127bec5a60ddc6e966a32278d5a5cd 490 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 4 454 5.5E-138 T 13-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 BEN78_09500 4e0c71d0b9f6634711886e98305010a8 327 Gene3D G3DSA:3.40.50.2300 102 311 3.0E-65 T 13-10-2018 BEN78_09500 4e0c71d0b9f6634711886e98305010a8 327 Pfam PF04348 LppC putative lipoprotein 1 317 8.5E-71 T 13-10-2018 IPR007443 Penicillin-binding protein activator LpoA BEN78_09500 4e0c71d0b9f6634711886e98305010a8 327 SUPERFAMILY SSF53822 1 320 5.59E-59 T 13-10-2018 IPR028082 Periplasmic binding protein-like I BEN78_09500 4e0c71d0b9f6634711886e98305010a8 327 Gene3D G3DSA:3.40.50.2300 1 310 3.0E-65 T 13-10-2018 BEN78_00905 a68acbcefe9d413ed402fb535c326e53 170 Gene3D G3DSA:1.20.1260.10 2 170 4.7E-65 T 13-10-2018 IPR012347 Ferritin-like BEN78_00905 a68acbcefe9d413ed402fb535c326e53 170 Pfam PF05974 Domain of unknown function (DUF892) 7 157 1.9E-41 T 13-10-2018 IPR010287 Domain of unknown function DUF892 BEN78_00905 a68acbcefe9d413ed402fb535c326e53 170 SUPERFAMILY SSF47240 6 156 5.04E-38 T 13-10-2018 IPR009078 Ferritin-like superfamily BEN78_14475 0578160fa0b2b02495f7faa2c2cda997 265 Pfam PF01311 Bacterial export proteins, family 1 20 252 6.1E-60 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BEN78_14475 0578160fa0b2b02495f7faa2c2cda997 265 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 20 260 1.2E-58 T 13-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 BEN78_14475 0578160fa0b2b02495f7faa2c2cda997 265 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 86 105 4.6E-24 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BEN78_14475 0578160fa0b2b02495f7faa2c2cda997 265 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 209 228 4.6E-24 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BEN78_14475 0578160fa0b2b02495f7faa2c2cda997 265 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 27 48 4.6E-24 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BEN78_14475 0578160fa0b2b02495f7faa2c2cda997 265 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 187 209 4.6E-24 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BEN78_11880 673aeb6e32113b945d45d954f6e3958c 200 SUPERFAMILY SSF53335 21 181 1.99E-17 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_11880 673aeb6e32113b945d45d954f6e3958c 200 Pfam PF08242 Methyltransferase domain 48 126 1.7E-7 T 13-10-2018 IPR013217 Methyltransferase type 12 BEN78_11880 673aeb6e32113b945d45d954f6e3958c 200 Gene3D G3DSA:3.40.50.150 1 175 1.8E-14 T 13-10-2018 BEN78_11130 3f1437a46a23e00061172aa057d09786 86 Gene3D G3DSA:2.40.50.140 3 85 9.7E-34 T 13-10-2018 BEN78_11130 3f1437a46a23e00061172aa057d09786 86 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 8 77 1.0E-32 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_11130 3f1437a46a23e00061172aa057d09786 86 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 7 82 23.597 T 13-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_11130 3f1437a46a23e00061172aa057d09786 86 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 8 77 1.2E-34 T 13-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_11130 3f1437a46a23e00061172aa057d09786 86 PRINTS PR00973 Ribosomal protein S17 family signature 68 75 5.1E-11 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_11130 3f1437a46a23e00061172aa057d09786 86 PRINTS PR00973 Ribosomal protein S17 family signature 26 49 5.1E-11 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_11130 3f1437a46a23e00061172aa057d09786 86 PRINTS PR00973 Ribosomal protein S17 family signature 58 68 5.1E-11 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_11130 3f1437a46a23e00061172aa057d09786 86 SUPERFAMILY SSF50249 8 84 5.14E-31 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN78_11130 3f1437a46a23e00061172aa057d09786 86 Pfam PF00366 Ribosomal protein S17 12 79 2.6E-31 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_07335 64c12782a4c02c3620ff4a13913dedb5 436 SUPERFAMILY SSF55031 225 331 1.83E-26 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain BEN78_07335 64c12782a4c02c3620ff4a13913dedb5 436 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 39 418 6.8E-98 T 13-10-2018 IPR017439 Amidohydrolase GO:0016787 BEN78_07335 64c12782a4c02c3620ff4a13913dedb5 436 Gene3D G3DSA:3.30.70.360 221 336 4.4E-131 T 13-10-2018 BEN78_07335 64c12782a4c02c3620ff4a13913dedb5 436 Gene3D G3DSA:3.40.630.10 39 415 4.4E-131 T 13-10-2018 BEN78_07335 64c12782a4c02c3620ff4a13913dedb5 436 Pfam PF01546 Peptidase family M20/M25/M40 97 425 1.1E-31 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 BEN78_07335 64c12782a4c02c3620ff4a13913dedb5 436 SUPERFAMILY SSF53187 30 430 1.46E-84 T 13-10-2018 BEN78_07335 64c12782a4c02c3620ff4a13913dedb5 436 Pfam PF07687 Peptidase dimerisation domain 225 321 1.8E-11 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain BEN78_07335 64c12782a4c02c3620ff4a13913dedb5 436 PIRSF PIRSF005962 26 433 8.9E-117 T 13-10-2018 IPR017439 Amidohydrolase GO:0016787 BEN78_11845 d3415aa817559c7fa54f0a628de46eaa 215 Gene3D G3DSA:1.20.1540.10 3 201 1.4E-29 T 13-10-2018 IPR035952 Rhomboid-like superfamily BEN78_11845 d3415aa817559c7fa54f0a628de46eaa 215 SUPERFAMILY SSF144091 4 206 9.02E-42 T 13-10-2018 BEN78_11845 d3415aa817559c7fa54f0a628de46eaa 215 Pfam PF01694 Rhomboid family 48 201 1.1E-32 T 13-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 BEN78_06445 ca62a57ba4523d594b0c0dace2cef590 138 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 7 115 18.209 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 BEN78_06445 ca62a57ba4523d594b0c0dace2cef590 138 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 9 113 1.4E-19 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 BEN78_06445 ca62a57ba4523d594b0c0dace2cef590 138 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 13-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 BEN78_06445 ca62a57ba4523d594b0c0dace2cef590 138 Pfam PF00825 Ribonuclease P 8 112 5.7E-26 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 BEN78_06445 ca62a57ba4523d594b0c0dace2cef590 138 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 23 107 3.0E-13 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 BEN78_06445 ca62a57ba4523d594b0c0dace2cef590 138 Gene3D G3DSA:3.30.230.10 3 116 1.0E-26 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BEN78_06445 ca62a57ba4523d594b0c0dace2cef590 138 SUPERFAMILY SSF54211 7 113 3.29E-25 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BEN78_00895 9a2bdb2d22e2e6afa6a40b8c5441876f 962 SUPERFAMILY SSF53383 21 442 1.47E-105 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_00895 9a2bdb2d22e2e6afa6a40b8c5441876f 962 Pfam PF02347 Glycine cleavage system P-protein 20 441 2.5E-178 T 13-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 BEN78_00895 9a2bdb2d22e2e6afa6a40b8c5441876f 962 Pfam PF02347 Glycine cleavage system P-protein 447 733 3.0E-13 T 13-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 BEN78_00895 9a2bdb2d22e2e6afa6a40b8c5441876f 962 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 21 943 0.0 T 13-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 BEN78_00895 9a2bdb2d22e2e6afa6a40b8c5441876f 962 Gene3D G3DSA:3.90.1150.10 761 897 5.8E-39 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN78_00895 9a2bdb2d22e2e6afa6a40b8c5441876f 962 Gene3D G3DSA:3.40.640.10 520 760 2.6E-61 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN78_00895 9a2bdb2d22e2e6afa6a40b8c5441876f 962 Gene3D G3DSA:3.40.640.10 99 357 1.3E-111 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN78_00895 9a2bdb2d22e2e6afa6a40b8c5441876f 962 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 12 949 25.481 T 13-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 BEN78_00895 9a2bdb2d22e2e6afa6a40b8c5441876f 962 SUPERFAMILY SSF53383 455 944 2.61E-102 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_14575 bb4dd02a06a6bde4d3f3bdae0788a9c6 138 TIGRFAM TIGR00208 fliS: flagellar protein FliS 4 123 6.7E-25 T 13-10-2018 IPR003713 Flagellar protein FliS GO:0044780 BEN78_14575 bb4dd02a06a6bde4d3f3bdae0788a9c6 138 Gene3D G3DSA:1.20.120.340 1 128 1.3E-39 T 13-10-2018 BEN78_14575 bb4dd02a06a6bde4d3f3bdae0788a9c6 138 Pfam PF02561 Flagellar protein FliS 8 124 4.2E-34 T 13-10-2018 IPR003713 Flagellar protein FliS GO:0044780 BEN78_14575 bb4dd02a06a6bde4d3f3bdae0788a9c6 138 PIRSF PIRSF039090 1 134 6.6E-45 T 13-10-2018 IPR003713 Flagellar protein FliS GO:0044780 BEN78_14575 bb4dd02a06a6bde4d3f3bdae0788a9c6 138 SUPERFAMILY SSF101116 8 124 1.19E-32 T 13-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 BEN78_02085 86f9a61d9b0fc2a6b7bd70c5ca6374ef 575 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 13 370 7.7E-64 T 13-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 BEN78_02085 86f9a61d9b0fc2a6b7bd70c5ca6374ef 575 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 165 177 - T 13-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 BEN78_02085 86f9a61d9b0fc2a6b7bd70c5ca6374ef 575 SUPERFAMILY SSF103473 394 573 2.62E-6 T 13-10-2018 IPR036259 MFS transporter superfamily BEN78_02085 86f9a61d9b0fc2a6b7bd70c5ca6374ef 575 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 76 100 - T 13-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 BEN78_02085 86f9a61d9b0fc2a6b7bd70c5ca6374ef 575 SUPERFAMILY SSF103473 18 383 2.62E-22 T 13-10-2018 IPR036259 MFS transporter superfamily BEN78_02085 86f9a61d9b0fc2a6b7bd70c5ca6374ef 575 Pfam PF00854 POT family 399 525 8.5E-18 T 13-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 BEN78_02085 86f9a61d9b0fc2a6b7bd70c5ca6374ef 575 Pfam PF00854 POT family 88 327 1.2E-37 T 13-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 BEN78_16865 5a3753c77a6eab78758f5766094af952 70 Gene3D G3DSA:1.20.1080.10 1 66 7.1E-9 T 13-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 BEN78_09835 d1d509dac9b195c5731c7dc44f47ff2a 286 Pfam PF03755 YicC-like family, N-terminal region 2 152 1.5E-36 T 13-10-2018 IPR013527 YicC-like, N-terminal BEN78_09835 d1d509dac9b195c5731c7dc44f47ff2a 286 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 286 7.5E-81 T 13-10-2018 IPR005229 Conserved hypothetical protein CHP00255 BEN78_09835 d1d509dac9b195c5731c7dc44f47ff2a 286 Pfam PF08340 Domain of unknown function (DUF1732) 202 286 7.0E-34 T 13-10-2018 IPR013551 Domain of unknown function DUF1732 BEN78_06540 b15c4a9468b37e9888eee25ad0cafd28 717 Pfam PF01432 Peptidase family M3 267 715 2.8E-132 T 13-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 BEN78_06540 b15c4a9468b37e9888eee25ad0cafd28 717 Gene3D G3DSA:1.10.1370.40 72 710 9.9E-254 T 13-10-2018 BEN78_06540 b15c4a9468b37e9888eee25ad0cafd28 717 SUPERFAMILY SSF55486 50 716 4.32E-182 T 13-10-2018 BEN78_06540 b15c4a9468b37e9888eee25ad0cafd28 717 Gene3D G3DSA:1.10.1370.10 183 648 9.9E-254 T 13-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 BEN78_11340 842f9a9e9fdfe0eb036a5e88d3e4bc47 256 SUPERFAMILY SSF55120 74 242 9.05E-37 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN78_11340 842f9a9e9fdfe0eb036a5e88d3e4bc47 256 Pfam PF00849 RNA pseudouridylate synthase 75 208 4.1E-18 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN78_11340 842f9a9e9fdfe0eb036a5e88d3e4bc47 256 SUPERFAMILY SSF55174 18 103 3.97E-13 T 13-10-2018 BEN78_11340 842f9a9e9fdfe0eb036a5e88d3e4bc47 256 Pfam PF01479 S4 domain 18 55 6.5E-12 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11340 842f9a9e9fdfe0eb036a5e88d3e4bc47 256 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 79 238 1.1E-42 T 13-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 BEN78_11340 842f9a9e9fdfe0eb036a5e88d3e4bc47 256 SMART SM00363 14 82 4.4E-5 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11340 842f9a9e9fdfe0eb036a5e88d3e4bc47 256 Gene3D G3DSA:3.30.70.580 76 235 9.7E-45 T 13-10-2018 BEN78_11340 842f9a9e9fdfe0eb036a5e88d3e4bc47 256 Gene3D G3DSA:3.10.290.10 16 75 6.1E-12 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BEN78_11340 842f9a9e9fdfe0eb036a5e88d3e4bc47 256 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 113 127 - T 13-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 BEN78_11340 842f9a9e9fdfe0eb036a5e88d3e4bc47 256 Gene3D G3DSA:3.30.70.1560 137 227 9.7E-45 T 13-10-2018 BEN78_14380 fceadc771b08564162b860f6764633ee 155 Gene3D G3DSA:2.30.30.40 13 138 1.2E-43 T 13-10-2018 BEN78_14380 fceadc771b08564162b860f6764633ee 155 Gene3D G3DSA:2.40.50.180 30 139 1.2E-43 T 13-10-2018 BEN78_14380 fceadc771b08564162b860f6764633ee 155 SUPERFAMILY SSF50341 6 148 1.03E-42 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 BEN78_14380 fceadc771b08564162b860f6764633ee 155 SMART SM00260 7 144 1.7E-42 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BEN78_14380 fceadc771b08564162b860f6764633ee 155 Pfam PF01584 CheW-like domain 11 148 4.6E-39 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BEN78_07550 5fd6eb605cc14ba895c9f87dd7101d9a 267 SMART SM00563 88 200 5.0E-23 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BEN78_07550 5fd6eb605cc14ba895c9f87dd7101d9a 267 SUPERFAMILY SSF69593 57 264 2.09E-21 T 13-10-2018 BEN78_07550 5fd6eb605cc14ba895c9f87dd7101d9a 267 Pfam PF01553 Acyltransferase 87 197 4.7E-19 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BEN78_10810 154b1bccc7cd1b3ccb3c566486ebe1de 453 SUPERFAMILY SSF54631 138 277 4.42E-29 T 13-10-2018 BEN78_10810 154b1bccc7cd1b3ccb3c566486ebe1de 453 Pfam PF01769 Divalent cation transporter 323 444 3.0E-25 T 13-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 BEN78_10810 154b1bccc7cd1b3ccb3c566486ebe1de 453 Pfam PF03448 MgtE intracellular N domain 37 137 2.6E-26 T 13-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain BEN78_10810 154b1bccc7cd1b3ccb3c566486ebe1de 453 Pfam PF00571 CBS domain 139 196 3.7E-7 T 13-10-2018 IPR000644 CBS domain BEN78_10810 154b1bccc7cd1b3ccb3c566486ebe1de 453 Pfam PF00571 CBS domain 213 257 2.0E-4 T 13-10-2018 IPR000644 CBS domain BEN78_10810 154b1bccc7cd1b3ccb3c566486ebe1de 453 Gene3D G3DSA:3.10.580.10 135 262 6.6E-38 T 13-10-2018 BEN78_10810 154b1bccc7cd1b3ccb3c566486ebe1de 453 Gene3D G3DSA:1.25.60.10 9 134 4.0E-20 T 13-10-2018 IPR038076 MgtE, N-terminal domain superfamily BEN78_10810 154b1bccc7cd1b3ccb3c566486ebe1de 453 SMART SM00924 36 139 1.7E-36 T 13-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain BEN78_10810 154b1bccc7cd1b3ccb3c566486ebe1de 453 SUPERFAMILY SSF158791 13 136 2.75E-29 T 13-10-2018 BEN78_10810 154b1bccc7cd1b3ccb3c566486ebe1de 453 SMART SM00116 146 199 3.3 T 13-10-2018 IPR000644 CBS domain BEN78_10810 154b1bccc7cd1b3ccb3c566486ebe1de 453 SMART SM00116 210 258 0.17 T 13-10-2018 IPR000644 CBS domain BEN78_10810 154b1bccc7cd1b3ccb3c566486ebe1de 453 Gene3D G3DSA:1.10.357.20 278 451 4.3E-47 T 13-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain BEN78_10810 154b1bccc7cd1b3ccb3c566486ebe1de 453 TIGRFAM TIGR00400 mgtE: magnesium transporter 21 451 1.2E-87 T 13-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 BEN78_10810 154b1bccc7cd1b3ccb3c566486ebe1de 453 SUPERFAMILY SSF161093 280 450 6.8E-48 T 13-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 BEN78_01740 f707696ba120bff979f103dba1e8bc25 118 Gene3D G3DSA:1.10.1660.10 13 87 9.3E-21 T 13-10-2018 BEN78_01740 f707696ba120bff979f103dba1e8bc25 118 SMART SM00422 19 89 4.7E-6 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN78_01740 f707696ba120bff979f103dba1e8bc25 118 Pfam PF13411 MerR HTH family regulatory protein 19 86 1.5E-21 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN78_01740 f707696ba120bff979f103dba1e8bc25 118 SUPERFAMILY SSF46955 17 111 1.74E-17 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily BEN78_10935 cf32fd0428ce791ecc699ad919f5aca5 172 Gene3D G3DSA:3.40.980.10 2 169 9.1E-49 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily BEN78_10935 cf32fd0428ce791ecc699ad919f5aca5 172 Pfam PF00994 Probable molybdopterin binding domain 14 154 9.3E-32 T 13-10-2018 IPR001453 MoaB/Mog domain BEN78_10935 cf32fd0428ce791ecc699ad919f5aca5 172 SUPERFAMILY SSF53218 6 164 4.32E-44 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily BEN78_10935 cf32fd0428ce791ecc699ad919f5aca5 172 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 8 166 1.0E-79 T 13-10-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 BEN78_10935 cf32fd0428ce791ecc699ad919f5aca5 172 SMART SM00852 13 157 3.3E-30 T 13-10-2018 IPR001453 MoaB/Mog domain BEN78_10935 cf32fd0428ce791ecc699ad919f5aca5 172 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 10 151 1.4E-33 T 13-10-2018 IPR001453 MoaB/Mog domain BEN78_10935 cf32fd0428ce791ecc699ad919f5aca5 172 PIRSF PIRSF006443 2 165 6.1E-62 T 13-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 BEN78_10195 967f6f65fd1292cbda3781a4a7fef9ba 236 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 74 225 1.7E-18 T 13-10-2018 IPR013830 SGNH hydrolase-type esterase domain BEN78_10195 967f6f65fd1292cbda3781a4a7fef9ba 236 SUPERFAMILY SSF52266 43 235 3.66E-46 T 13-10-2018 BEN78_10195 967f6f65fd1292cbda3781a4a7fef9ba 236 Gene3D G3DSA:3.40.50.1110 33 235 2.0E-36 T 13-10-2018 IPR036514 SGNH hydrolase superfamily BEN78_14250 1c5691d3b9121a84367e2c8868858226 575 Gene3D G3DSA:3.90.1640.30 52 324 5.2E-82 T 13-10-2018 BEN78_14250 1c5691d3b9121a84367e2c8868858226 575 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 25 568 3.0E-131 T 13-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 BEN78_14250 1c5691d3b9121a84367e2c8868858226 575 Gene3D G3DSA:3.10.310.30 325 456 1.2E-28 T 13-10-2018 BEN78_14250 1c5691d3b9121a84367e2c8868858226 575 SUPERFAMILY SSF64182 49 462 6.15E-105 T 13-10-2018 IPR038763 DHH phosphoesterase superfamily BEN78_14250 1c5691d3b9121a84367e2c8868858226 575 Pfam PF01368 DHH family 75 210 6.9E-10 T 13-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BEN78_14250 1c5691d3b9121a84367e2c8868858226 575 Pfam PF02272 DHHA1 domain 320 451 4.2E-22 T 13-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 BEN78_01110 7c9a46a752d20400c1c77d02293d3a6a 880 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 11 858 0.0 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BEN78_01110 7c9a46a752d20400c1c77d02293d3a6a 880 Gene3D G3DSA:3.30.980.10 568 701 5.8E-50 T 13-10-2018 BEN78_01110 7c9a46a752d20400c1c77d02293d3a6a 880 Gene3D G3DSA:3.30.930.10 5 253 2.2E-119 T 13-10-2018 BEN78_01110 7c9a46a752d20400c1c77d02293d3a6a 880 SUPERFAMILY SSF55186 557 715 1.31E-51 T 13-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 BEN78_01110 7c9a46a752d20400c1c77d02293d3a6a 880 Gene3D G3DSA:3.10.310.40 769 876 2.2E-26 T 13-10-2018 BEN78_01110 7c9a46a752d20400c1c77d02293d3a6a 880 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 879 197.306 T 13-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 BEN78_01110 7c9a46a752d20400c1c77d02293d3a6a 880 Gene3D G3DSA:2.40.30.130 480 557 5.5E-11 T 13-10-2018 BEN78_01110 7c9a46a752d20400c1c77d02293d3a6a 880 PRINTS PR00980 Alanyl-tRNA synthetase signature 283 299 9.9E-32 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BEN78_01110 7c9a46a752d20400c1c77d02293d3a6a 880 PRINTS PR00980 Alanyl-tRNA synthetase signature 307 320 9.9E-32 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BEN78_01110 7c9a46a752d20400c1c77d02293d3a6a 880 PRINTS PR00980 Alanyl-tRNA synthetase signature 237 250 9.9E-32 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BEN78_01110 7c9a46a752d20400c1c77d02293d3a6a 880 PRINTS PR00980 Alanyl-tRNA synthetase signature 79 90 9.9E-32 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BEN78_01110 7c9a46a752d20400c1c77d02293d3a6a 880 PRINTS PR00980 Alanyl-tRNA synthetase signature 210 221 9.9E-32 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BEN78_01110 7c9a46a752d20400c1c77d02293d3a6a 880 Gene3D G3DSA:3.30.54.20 629 681 5.8E-50 T 13-10-2018 BEN78_01110 7c9a46a752d20400c1c77d02293d3a6a 880 SUPERFAMILY SSF101353 257 446 1.23E-58 T 13-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 BEN78_01110 7c9a46a752d20400c1c77d02293d3a6a 880 SMART SM00863 658 700 1.1E-20 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 BEN78_01110 7c9a46a752d20400c1c77d02293d3a6a 880 SUPERFAMILY SSF50447 457 557 1.69E-17 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BEN78_01110 7c9a46a752d20400c1c77d02293d3a6a 880 SUPERFAMILY SSF55681 7 256 7.62E-107 T 13-10-2018 BEN78_01110 7c9a46a752d20400c1c77d02293d3a6a 880 Pfam PF01411 tRNA synthetases class II (A) 10 561 2.9E-219 T 13-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 BEN78_01110 7c9a46a752d20400c1c77d02293d3a6a 880 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 658 700 1.2E-17 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 BEN78_01110 7c9a46a752d20400c1c77d02293d3a6a 880 Pfam PF02272 DHHA1 domain 736 875 1.1E-24 T 13-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 BEN78_12300 6271940fa30ff147bcce44f89a87273f 230 SMART SM00525 202 222 0.0043 T 13-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 BEN78_12300 6271940fa30ff147bcce44f89a87273f 230 Gene3D G3DSA:1.10.340.30 37 148 1.0E-75 T 13-10-2018 BEN78_12300 6271940fa30ff147bcce44f89a87273f 230 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 50 183 2.9E-18 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 BEN78_12300 6271940fa30ff147bcce44f89a87273f 230 Pfam PF00633 Helix-hairpin-helix motif 116 143 5.0E-7 T 13-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 BEN78_12300 6271940fa30ff147bcce44f89a87273f 230 SMART SM00478 54 201 9.1E-55 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 BEN78_12300 6271940fa30ff147bcce44f89a87273f 230 Hamap MF_00942 Endonuclease III [nth]. 10 225 36.624 T 13-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 BEN78_12300 6271940fa30ff147bcce44f89a87273f 230 ProSitePatterns PS01155 Endonuclease III family signature. 118 147 - T 13-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 BEN78_12300 6271940fa30ff147bcce44f89a87273f 230 PIRSF PIRSF001435 15 226 2.4E-49 T 13-10-2018 BEN78_12300 6271940fa30ff147bcce44f89a87273f 230 SUPERFAMILY SSF48150 19 224 1.29E-70 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 BEN78_12300 6271940fa30ff147bcce44f89a87273f 230 Gene3D G3DSA:1.10.1670.10 27 219 1.0E-75 T 13-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 BEN78_12300 6271940fa30ff147bcce44f89a87273f 230 TIGRFAM TIGR01083 nth: endonuclease III 20 210 1.1E-82 T 13-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 BEN78_01410 526bb6ef1d719be8619a565cce8c5d7e 725 SMART SM00656 408 610 2.5E-5 T 13-10-2018 IPR002022 Pectate lyase BEN78_01410 526bb6ef1d719be8619a565cce8c5d7e 725 Pfam PF00544 Pectate lyase 417 602 9.3E-12 T 13-10-2018 IPR002022 Pectate lyase BEN78_01410 526bb6ef1d719be8619a565cce8c5d7e 725 Gene3D G3DSA:2.160.20.10 292 648 9.3E-55 T 13-10-2018 IPR012334 Pectin lyase fold BEN78_01410 526bb6ef1d719be8619a565cce8c5d7e 725 Gene3D G3DSA:2.60.120.260 35 145 4.1E-13 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily BEN78_01410 526bb6ef1d719be8619a565cce8c5d7e 725 Gene3D G3DSA:2.60.40.10 158 241 5.2E-10 T 13-10-2018 IPR013783 Immunoglobulin-like fold BEN78_01410 526bb6ef1d719be8619a565cce8c5d7e 725 SUPERFAMILY SSF49785 26 144 3.61E-5 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily BEN78_01410 526bb6ef1d719be8619a565cce8c5d7e 725 SUPERFAMILY SSF51126 293 616 3.88E-48 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor BEN78_08200 525a8c2411611ea98c18ab7a3f7f8b6c 201 Pfam PF02669 K+-transporting ATPase, c chain 14 192 2.0E-63 T 13-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 BEN78_08200 525a8c2411611ea98c18ab7a3f7f8b6c 201 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 13 193 1.2E-54 T 13-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 BEN78_08200 525a8c2411611ea98c18ab7a3f7f8b6c 201 PIRSF PIRSF001296 9 198 1.6E-65 T 13-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 BEN78_08200 525a8c2411611ea98c18ab7a3f7f8b6c 201 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 10 194 32.197 T 13-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 BEN78_03180 22a2f8640dbe61f332d7e7ea7494d18a 459 Pfam PF01554 MatE 23 181 1.2E-20 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BEN78_03180 22a2f8640dbe61f332d7e7ea7494d18a 459 Pfam PF01554 MatE 249 409 2.6E-23 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BEN78_03180 22a2f8640dbe61f332d7e7ea7494d18a 459 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 424 4.1E-70 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BEN78_11945 d7e4535f161d51bac7b2d09f086ec016 225 Pfam PF04367 Protein of unknown function (DUF502) 76 176 1.1E-27 T 13-10-2018 IPR007462 Protein of unknown function DUF502 BEN78_06735 34445b79648dd61bf773f1941d14e32b 425 Pfam PF02803 Thiolase, C-terminal domain 285 425 4.9E-30 T 13-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 BEN78_06735 34445b79648dd61bf773f1941d14e32b 425 Gene3D G3DSA:3.40.47.10 3 425 6.7E-96 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 BEN78_06735 34445b79648dd61bf773f1941d14e32b 425 PIRSF PIRSF000429 1 425 1.3E-95 T 13-10-2018 IPR002155 Thiolase GO:0016747 BEN78_06735 34445b79648dd61bf773f1941d14e32b 425 SUPERFAMILY SSF53901 282 425 4.21E-30 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 BEN78_06735 34445b79648dd61bf773f1941d14e32b 425 Pfam PF00108 Thiolase, N-terminal domain 7 275 1.3E-49 T 13-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 BEN78_06735 34445b79648dd61bf773f1941d14e32b 425 SUPERFAMILY SSF53901 7 282 8.64E-52 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 BEN78_06735 34445b79648dd61bf773f1941d14e32b 425 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 9 424 2.6E-109 T 13-10-2018 IPR002155 Thiolase GO:0016747 BEN78_07415 93e5e1c1dfa4c891c6c0ad611bd1b426 356 Pfam PF16220 Domain of unknown function (DUF4880) 17 58 1.7E-13 T 13-10-2018 IPR032623 FecR, N-terminal BEN78_07415 93e5e1c1dfa4c891c6c0ad611bd1b426 356 PIRSF PIRSF018266 10 335 2.5E-76 T 13-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component BEN78_07415 93e5e1c1dfa4c891c6c0ad611bd1b426 356 Pfam PF04773 FecR protein 123 213 3.8E-19 T 13-10-2018 IPR006860 FecR protein BEN78_07415 93e5e1c1dfa4c891c6c0ad611bd1b426 356 Pfam PF16344 Domain of unknown function (DUF4974) 256 309 5.4E-7 T 13-10-2018 IPR032508 Protein FecR, C-terminal BEN78_07415 93e5e1c1dfa4c891c6c0ad611bd1b426 356 Gene3D G3DSA:2.60.120.1440 116 243 2.2E-18 T 13-10-2018 BEN78_04350 af92914d32da87b88daafba961b3a9e1 180 SUPERFAMILY SSF51161 4 177 4.85E-47 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily BEN78_04350 af92914d32da87b88daafba961b3a9e1 180 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 129 1.1E-8 T 13-10-2018 IPR001451 Hexapeptide repeat BEN78_04350 af92914d32da87b88daafba961b3a9e1 180 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 45 2.5E-6 T 13-10-2018 IPR001451 Hexapeptide repeat BEN78_04350 af92914d32da87b88daafba961b3a9e1 180 Gene3D G3DSA:2.160.10.10 2 179 5.3E-60 T 13-10-2018 BEN78_15070 6ba30ae0719659e71204fdfe6941a0bf 304 Gene3D G3DSA:3.40.190.10 92 292 2.5E-55 T 13-10-2018 BEN78_15070 6ba30ae0719659e71204fdfe6941a0bf 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.9E-14 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_15070 6ba30ae0719659e71204fdfe6941a0bf 304 Gene3D G3DSA:1.10.10.10 1 85 4.2E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_15070 6ba30ae0719659e71204fdfe6941a0bf 304 SUPERFAMILY SSF53850 91 295 5.07E-35 T 13-10-2018 BEN78_15070 6ba30ae0719659e71204fdfe6941a0bf 304 SUPERFAMILY SSF46785 2 82 2.24E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_15070 6ba30ae0719659e71204fdfe6941a0bf 304 Pfam PF03466 LysR substrate binding domain 93 297 6.1E-21 T 13-10-2018 IPR005119 LysR, substrate-binding BEN78_15070 6ba30ae0719659e71204fdfe6941a0bf 304 Gene3D G3DSA:3.40.190.10 169 268 2.5E-55 T 13-10-2018 BEN78_05240 aff30d4670d783780cfd54164deb7155 217 SUPERFAMILY SSF52141 26 203 2.06E-53 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BEN78_05240 aff30d4670d783780cfd54164deb7155 217 Gene3D G3DSA:3.40.470.10 18 216 1.4E-57 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BEN78_05240 aff30d4670d783780cfd54164deb7155 217 Pfam PF03167 Uracil DNA glycosylase superfamily 50 208 2.0E-36 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BEN78_05240 aff30d4670d783780cfd54164deb7155 217 SMART SM00987 50 209 7.3E-33 T 13-10-2018 BEN78_05240 aff30d4670d783780cfd54164deb7155 217 SMART SM00986 50 209 7.3E-33 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BEN78_05240 aff30d4670d783780cfd54164deb7155 217 TIGRFAM TIGR03914 UDG_fam_dom: uracil-DNA glycosylase family domain 22 211 1.3E-81 T 13-10-2018 IPR005273 Uracil-DNA glycosylase family 4 BEN78_05240 aff30d4670d783780cfd54164deb7155 217 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 36 213 3.6E-37 T 13-10-2018 IPR005273 Uracil-DNA glycosylase family 4 BEN78_05230 feae9ff0eff288c29848aefda4ff31ba 357 Pfam PF11799 impB/mucB/samB family C-terminal domain 232 343 1.4E-15 T 13-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BEN78_05230 feae9ff0eff288c29848aefda4ff31ba 357 Gene3D G3DSA:1.10.150.20 178 228 2.6E-17 T 13-10-2018 BEN78_05230 feae9ff0eff288c29848aefda4ff31ba 357 SUPERFAMILY SSF56672 2 233 1.16E-88 T 13-10-2018 BEN78_05230 feae9ff0eff288c29848aefda4ff31ba 357 Hamap MF_01113 DNA polymerase IV [dinB]. 1 351 37.143 T 13-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 BEN78_05230 feae9ff0eff288c29848aefda4ff31ba 357 Gene3D G3DSA:3.30.70.270 68 177 7.1E-35 T 13-10-2018 BEN78_05230 feae9ff0eff288c29848aefda4ff31ba 357 Pfam PF00817 impB/mucB/samB family 7 153 1.0E-49 T 13-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BEN78_05230 feae9ff0eff288c29848aefda4ff31ba 357 Gene3D G3DSA:2.30.40.20 11 67 1.2E-27 T 13-10-2018 BEN78_05230 feae9ff0eff288c29848aefda4ff31ba 357 SUPERFAMILY SSF100879 238 337 1.51E-19 T 13-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BEN78_05230 feae9ff0eff288c29848aefda4ff31ba 357 Gene3D G3DSA:3.30.1490.100 240 345 3.8E-17 T 13-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BEN78_02900 75e82e530e593c5a11176e84aa770f50 299 Pfam PF08338 Domain of unknown function (DUF1731) 251 295 2.9E-15 T 13-10-2018 IPR013549 Domain of unknown function DUF1731 BEN78_02900 75e82e530e593c5a11176e84aa770f50 299 SUPERFAMILY SSF51735 1 251 1.44E-37 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_02900 75e82e530e593c5a11176e84aa770f50 299 Gene3D G3DSA:3.40.50.720 1 288 5.0E-70 T 13-10-2018 BEN78_02900 75e82e530e593c5a11176e84aa770f50 299 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 212 7.2E-16 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 BEN78_02900 75e82e530e593c5a11176e84aa770f50 299 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 291 8.6E-91 T 13-10-2018 IPR010099 Epimerase family protein SDR39U1 BEN78_11660 e4625acbd96f80be7efb823a7f393122 175 Gene3D G3DSA:3.55.40.10 39 175 3.8E-15 T 13-10-2018 BEN78_11660 e4625acbd96f80be7efb823a7f393122 175 Pfam PF07963 Prokaryotic N-terminal methylation motif 16 36 6.3E-6 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site BEN78_11660 e4625acbd96f80be7efb823a7f393122 175 Pfam PF12019 Type II transport protein GspH 53 161 2.7E-16 T 13-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 BEN78_11660 e4625acbd96f80be7efb823a7f393122 175 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 37 4.2E-7 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site BEN78_11660 e4625acbd96f80be7efb823a7f393122 175 SUPERFAMILY SSF54523 17 107 6.75E-19 T 13-10-2018 BEN78_11220 1a4d698af145fb9c1518d4c56c7a50f5 464 Pfam PF01474 Class-II DAHP synthetase family 18 452 1.6E-190 T 13-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 BEN78_11220 1a4d698af145fb9c1518d4c56c7a50f5 464 SUPERFAMILY SSF51569 9 454 1.32E-182 T 13-10-2018 BEN78_11220 1a4d698af145fb9c1518d4c56c7a50f5 464 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 18 457 1.2E-212 T 13-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 BEN78_11220 1a4d698af145fb9c1518d4c56c7a50f5 464 Gene3D G3DSA:3.20.20.70 189 457 1.0E-101 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_14220 c459d22f25f06b65260470378f7b149f 229 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 128 145 - T 13-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BEN78_14220 c459d22f25f06b65260470378f7b149f 229 SUPERFAMILY SSF51735 1 222 4.6E-25 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_14220 c459d22f25f06b65260470378f7b149f 229 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 107 221 6.0E-30 T 13-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BEN78_14220 c459d22f25f06b65260470378f7b149f 229 Gene3D G3DSA:3.40.50.720 1 221 2.7E-55 T 13-10-2018 BEN78_14220 c459d22f25f06b65260470378f7b149f 229 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 222 24.352 T 13-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BEN78_14220 c459d22f25f06b65260470378f7b149f 229 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 1 104 7.2E-16 T 13-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BEN78_14220 c459d22f25f06b65260470378f7b149f 229 Gene3D G3DSA:3.30.360.10 106 191 2.7E-55 T 13-10-2018 BEN78_14220 c459d22f25f06b65260470378f7b149f 229 SUPERFAMILY SSF55347 106 193 1.85E-21 T 13-10-2018 BEN78_14220 c459d22f25f06b65260470378f7b149f 229 PIRSF PIRSF000161 1 225 1.2E-57 T 13-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BEN78_14220 c459d22f25f06b65260470378f7b149f 229 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 222 9.4E-46 T 13-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BEN78_12920 98067d01b9b1733fb96e60172e34ed16 190 SUPERFAMILY SSF55846 21 183 1.19E-34 T 13-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BEN78_12920 98067d01b9b1733fb96e60172e34ed16 190 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 27 172 7.3E-24 T 13-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BEN78_12920 98067d01b9b1733fb96e60172e34ed16 190 SMART SM00644 18 161 1.3E-21 T 13-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BEN78_12920 98067d01b9b1733fb96e60172e34ed16 190 Gene3D G3DSA:3.40.80.10 15 185 6.8E-34 T 13-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BEN78_13815 5d01942d21a0ff193038fd976449bf04 689 SUPERFAMILY SSF52096 16 303 4.55E-67 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BEN78_13815 5d01942d21a0ff193038fd976449bf04 689 Gene3D G3DSA:3.40.50.720 306 495 4.7E-55 T 13-10-2018 BEN78_13815 5d01942d21a0ff193038fd976449bf04 689 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 488 1.1E-48 T 13-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BEN78_13815 5d01942d21a0ff193038fd976449bf04 689 SUPERFAMILY SSF48179 601 679 6.04E-17 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BEN78_13815 5d01942d21a0ff193038fd976449bf04 689 SUPERFAMILY SSF51735 313 492 5.38E-44 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_13815 5d01942d21a0ff193038fd976449bf04 689 Gene3D G3DSA:1.10.1040.50 496 685 8.1E-52 T 13-10-2018 BEN78_13815 5d01942d21a0ff193038fd976449bf04 689 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 493 584 2.5E-17 T 13-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BEN78_13815 5d01942d21a0ff193038fd976449bf04 689 Gene3D G3DSA:3.90.226.10 9 305 4.0E-81 T 13-10-2018 BEN78_13815 5d01942d21a0ff193038fd976449bf04 689 Pfam PF00378 Enoyl-CoA hydratase/isomerase 19 208 1.4E-34 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 BEN78_13815 5d01942d21a0ff193038fd976449bf04 689 SUPERFAMILY SSF48179 492 617 1.45E-26 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BEN78_13815 5d01942d21a0ff193038fd976449bf04 689 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 110 130 - T 13-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 BEN78_01445 c14023ec3973a8e96aee60f118daa8e6 341 Pfam PF00331 Glycosyl hydrolase family 10 59 332 4.5E-47 T 13-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BEN78_01445 c14023ec3973a8e96aee60f118daa8e6 341 Gene3D G3DSA:3.20.20.80 37 340 5.4E-93 T 13-10-2018 BEN78_01445 c14023ec3973a8e96aee60f118daa8e6 341 SUPERFAMILY SSF51445 38 338 2.69E-80 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily BEN78_01445 c14023ec3973a8e96aee60f118daa8e6 341 SMART SM00633 73 336 1.9E-11 T 13-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BEN78_11985 f94a413059753e9e557f75dd2dba771a 178 Pfam PF04390 Lipopolysaccharide-assembly 49 165 4.4E-6 T 13-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 BEN78_11985 f94a413059753e9e557f75dd2dba771a 178 Gene3D G3DSA:3.30.160.150 25 176 4.9E-36 T 13-10-2018 BEN78_11985 f94a413059753e9e557f75dd2dba771a 178 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 10 170 21.757 T 13-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 BEN78_03165 96ecde0aba26216a1f8c9a07b57f9e56 935 Pfam PF00593 TonB dependent receptor 438 934 1.5E-35 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_03165 96ecde0aba26216a1f8c9a07b57f9e56 935 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 918 935 - T 13-10-2018 IPR010917 TonB-dependent receptor, conserved site BEN78_03165 96ecde0aba26216a1f8c9a07b57f9e56 935 SUPERFAMILY SSF56935 34 935 2.75E-88 T 13-10-2018 BEN78_03165 96ecde0aba26216a1f8c9a07b57f9e56 935 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 45 935 2.5E-238 T 13-10-2018 IPR010104 Bacterial TonB-dependent receptor BEN78_03165 96ecde0aba26216a1f8c9a07b57f9e56 935 Gene3D G3DSA:2.170.130.10 36 202 3.9E-14 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_03165 96ecde0aba26216a1f8c9a07b57f9e56 935 Pfam PF07715 TonB-dependent Receptor Plug Domain 68 177 8.8E-12 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_03165 96ecde0aba26216a1f8c9a07b57f9e56 935 Gene3D G3DSA:2.40.170.20 287 935 6.4E-51 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_08135 06c6ed661e6731144aa2bb59ba37db4a 180 Gene3D G3DSA:1.20.58.320 2 80 3.7E-27 T 13-10-2018 BEN78_08135 06c6ed661e6731144aa2bb59ba37db4a 180 SUPERFAMILY SSF48452 4 177 2.2E-60 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_08135 06c6ed661e6731144aa2bb59ba37db4a 180 Gene3D G3DSA:1.25.40.10 81 180 1.9E-33 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_08135 06c6ed661e6731144aa2bb59ba37db4a 180 Pfam PF06041 Bacterial protein of unknown function (DUF924) 9 178 1.8E-57 T 13-10-2018 IPR010323 Protein of unknown function DUF924 BEN78_10655 b1d92539b0024b1714d5f2b447c5f14e 570 TIGRFAM TIGR04120 DNA_lig_bact: DNA ligase, ATP-dependent, PP_1105 family 244 568 4.1E-139 T 13-10-2018 IPR026333 ATP-dependent DNA ligase, PP_1105 family BEN78_10655 b1d92539b0024b1714d5f2b447c5f14e 570 Gene3D G3DSA:2.40.50.140 448 570 1.4E-27 T 13-10-2018 BEN78_10655 b1d92539b0024b1714d5f2b447c5f14e 570 SUPERFAMILY SSF56091 246 444 2.07E-55 T 13-10-2018 BEN78_10655 b1d92539b0024b1714d5f2b447c5f14e 570 Pfam PF01068 ATP dependent DNA ligase domain 246 444 2.4E-34 T 13-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 BEN78_10655 b1d92539b0024b1714d5f2b447c5f14e 570 Pfam PF04675 DNA ligase N terminus 3 166 5.0E-21 T 13-10-2018 IPR012308 DNA ligase, ATP-dependent, N-terminal GO:0003677|GO:0003910|GO:0006281|GO:0006310 BEN78_10655 b1d92539b0024b1714d5f2b447c5f14e 570 Pfam PF04679 ATP dependent DNA ligase C terminal region 465 554 6.5E-8 T 13-10-2018 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 BEN78_10655 b1d92539b0024b1714d5f2b447c5f14e 570 SUPERFAMILY SSF50249 449 569 1.15E-27 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN78_10655 b1d92539b0024b1714d5f2b447c5f14e 570 Gene3D G3DSA:3.30.470.30 244 444 3.4E-50 T 13-10-2018 BEN78_14450 3b0e6ede4f70a47f7a2d966975301e4a 251 Pfam PF04539 Sigma-70 region 3 101 173 1.9E-12 T 13-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 BEN78_14450 3b0e6ede4f70a47f7a2d966975301e4a 251 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 21 238 7.9E-81 T 13-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 BEN78_14450 3b0e6ede4f70a47f7a2d966975301e4a 251 PIRSF PIRSF000770 1 245 3.7E-36 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN78_14450 3b0e6ede4f70a47f7a2d966975301e4a 251 PRINTS PR00046 Major sigma-70 factor signature 222 233 2.7E-11 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN78_14450 3b0e6ede4f70a47f7a2d966975301e4a 251 PRINTS PR00046 Major sigma-70 factor signature 46 59 2.7E-11 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN78_14450 3b0e6ede4f70a47f7a2d966975301e4a 251 PRINTS PR00046 Major sigma-70 factor signature 190 202 2.7E-11 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN78_14450 3b0e6ede4f70a47f7a2d966975301e4a 251 PRINTS PR00046 Major sigma-70 factor signature 207 222 2.7E-11 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN78_14450 3b0e6ede4f70a47f7a2d966975301e4a 251 Pfam PF04545 Sigma-70, region 4 187 234 1.5E-16 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 BEN78_14450 3b0e6ede4f70a47f7a2d966975301e4a 251 Gene3D G3DSA:1.10.1740.10 5 88 6.1E-28 T 13-10-2018 BEN78_14450 3b0e6ede4f70a47f7a2d966975301e4a 251 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 236 1.9E-32 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BEN78_14450 3b0e6ede4f70a47f7a2d966975301e4a 251 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 207 233 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN78_14450 3b0e6ede4f70a47f7a2d966975301e4a 251 Pfam PF04542 Sigma-70 region 2 23 91 2.5E-16 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BEN78_14450 3b0e6ede4f70a47f7a2d966975301e4a 251 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 5 240 61.668 T 13-10-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 BEN78_14450 3b0e6ede4f70a47f7a2d966975301e4a 251 Gene3D G3DSA:1.20.140.160 90 239 3.6E-45 T 13-10-2018 BEN78_14450 3b0e6ede4f70a47f7a2d966975301e4a 251 SUPERFAMILY SSF88946 19 91 3.01E-23 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BEN78_14450 3b0e6ede4f70a47f7a2d966975301e4a 251 SUPERFAMILY SSF88659 92 159 6.98E-13 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN78_14450 3b0e6ede4f70a47f7a2d966975301e4a 251 SUPERFAMILY SSF88659 165 238 2.62E-19 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN78_13450 37b8930f6c1e0a60f9f487d72e99a34b 362 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN78_13450 37b8930f6c1e0a60f9f487d72e99a34b 362 Pfam PF00005 ABC transporter 23 162 4.1E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_13450 37b8930f6c1e0a60f9f487d72e99a34b 362 Pfam PF08402 TOBE domain 282 352 4.6E-8 T 13-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 BEN78_13450 37b8930f6c1e0a60f9f487d72e99a34b 362 SMART SM00382 29 211 6.2E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_13450 37b8930f6c1e0a60f9f487d72e99a34b 362 Gene3D G3DSA:2.40.50.940 223 353 8.2E-29 T 13-10-2018 BEN78_13450 37b8930f6c1e0a60f9f487d72e99a34b 362 Gene3D G3DSA:3.40.50.300 4 222 1.9E-62 T 13-10-2018 BEN78_13450 37b8930f6c1e0a60f9f487d72e99a34b 362 SUPERFAMILY SSF50331 237 360 1.7E-27 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal BEN78_13450 37b8930f6c1e0a60f9f487d72e99a34b 362 SUPERFAMILY SSF52540 4 242 1.36E-82 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_13450 37b8930f6c1e0a60f9f487d72e99a34b 362 Gene3D G3DSA:2.40.50.140 289 344 8.2E-29 T 13-10-2018 BEN78_07770 bb145554e8c8a8a19e4aad71786411da 428 Gene3D G3DSA:1.10.150.320 330 389 3.5E-5 T 13-10-2018 BEN78_07770 bb145554e8c8a8a19e4aad71786411da 428 SUPERFAMILY SSF47781 326 400 2.52E-10 T 13-10-2018 IPR010994 RuvA domain 2-like BEN78_07770 bb145554e8c8a8a19e4aad71786411da 428 SUPERFAMILY SSF102114 45 185 4.71E-14 T 13-10-2018 BEN78_07770 bb145554e8c8a8a19e4aad71786411da 428 Gene3D G3DSA:3.20.20.70 51 215 1.1E-9 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_07770 bb145554e8c8a8a19e4aad71786411da 428 TIGRFAM TIGR03916 rSAM_link_UDG: putative DNA modification/repair radical SAM protein 3 423 5.0E-169 T 13-10-2018 IPR023874 DNA modification/repair radical SAM protein, putative BEN78_05090 3d7f77fa44575d392c9ac3bfbad8bf0d 107 SMART SM00530 23 78 1.6E-6 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN78_05090 3d7f77fa44575d392c9ac3bfbad8bf0d 107 Gene3D G3DSA:1.10.260.40 10 83 8.7E-14 T 13-10-2018 BEN78_05090 3d7f77fa44575d392c9ac3bfbad8bf0d 107 SUPERFAMILY SSF47413 16 72 2.22E-11 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN78_05090 3d7f77fa44575d392c9ac3bfbad8bf0d 107 Pfam PF13560 Helix-turn-helix domain 20 73 4.2E-11 T 13-10-2018 BEN78_03725 6f97a7ba2fd9acc8b724ff43dba47c7b 720 SUPERFAMILY SSF81296 10 106 6.3E-13 T 13-10-2018 IPR014756 Immunoglobulin E-set BEN78_03725 6f97a7ba2fd9acc8b724ff43dba47c7b 720 Gene3D G3DSA:3.20.20.80 228 604 1.6E-154 T 13-10-2018 BEN78_03725 6f97a7ba2fd9acc8b724ff43dba47c7b 720 SUPERFAMILY SSF81296 115 214 3.5E-28 T 13-10-2018 IPR014756 Immunoglobulin E-set BEN78_03725 6f97a7ba2fd9acc8b724ff43dba47c7b 720 Pfam PF00128 Alpha amylase, catalytic domain 267 340 2.5E-4 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BEN78_03725 6f97a7ba2fd9acc8b724ff43dba47c7b 720 SUPERFAMILY SSF51011 615 717 9.35E-34 T 13-10-2018 BEN78_03725 6f97a7ba2fd9acc8b724ff43dba47c7b 720 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 102 716 6.7E-264 T 13-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 BEN78_03725 6f97a7ba2fd9acc8b724ff43dba47c7b 720 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 117 200 2.1E-21 T 13-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 BEN78_03725 6f97a7ba2fd9acc8b724ff43dba47c7b 720 Gene3D G3DSA:2.60.40.1180 615 718 8.4E-39 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta BEN78_03725 6f97a7ba2fd9acc8b724ff43dba47c7b 720 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 620 717 5.3E-26 T 13-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 BEN78_03725 6f97a7ba2fd9acc8b724ff43dba47c7b 720 PIRSF PIRSF000463 3 719 3.0E-273 T 13-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 BEN78_03725 6f97a7ba2fd9acc8b724ff43dba47c7b 720 SMART SM00642 242 605 5.0E-5 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BEN78_03725 6f97a7ba2fd9acc8b724ff43dba47c7b 720 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 93 719 42.806 T 13-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 BEN78_03725 6f97a7ba2fd9acc8b724ff43dba47c7b 720 Gene3D G3DSA:2.60.40.10 2 214 4.6E-60 T 13-10-2018 IPR013783 Immunoglobulin-like fold BEN78_03725 6f97a7ba2fd9acc8b724ff43dba47c7b 720 SUPERFAMILY SSF51445 237 611 1.65E-104 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily BEN78_10545 662397e55badcf991b5b62aa9d49a497 206 Gene3D G3DSA:1.10.357.10 29 205 1.8E-22 T 13-10-2018 BEN78_10545 662397e55badcf991b5b62aa9d49a497 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 52 75 5.1E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN78_10545 662397e55badcf991b5b62aa9d49a497 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 44 5.1E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN78_10545 662397e55badcf991b5b62aa9d49a497 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 34 77 4.4E-14 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN78_10545 662397e55badcf991b5b62aa9d49a497 206 SUPERFAMILY SSF46689 21 94 5.13E-16 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN78_10545 662397e55badcf991b5b62aa9d49a497 206 SUPERFAMILY SSF48498 97 197 2.85E-5 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BEN78_02460 859cf6ace962f98755f0fd8135ad03b0 616 SUPERFAMILY SSF116726 241 313 5.1E-8 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BEN78_02460 859cf6ace962f98755f0fd8135ad03b0 616 SUPERFAMILY SSF116726 330 414 1.19E-15 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BEN78_02460 859cf6ace962f98755f0fd8135ad03b0 616 Pfam PF03600 Citrate transporter 22 563 5.6E-39 T 13-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 BEN78_02460 859cf6ace962f98755f0fd8135ad03b0 616 Gene3D G3DSA:3.30.70.1450 334 408 5.5E-14 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BEN78_02460 859cf6ace962f98755f0fd8135ad03b0 616 Gene3D G3DSA:3.30.70.1450 243 316 5.3E-7 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BEN78_02460 859cf6ace962f98755f0fd8135ad03b0 616 Pfam PF02080 TrkA-C domain 338 405 4.4E-8 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BEN78_15180 b619512beef37626236ab7b178c4b6b4 591 Gene3D G3DSA:2.120.10.30 8 168 3.1E-14 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BEN78_15180 b619512beef37626236ab7b178c4b6b4 591 SUPERFAMILY SSF53474 365 567 1.26E-13 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_15180 b619512beef37626236ab7b178c4b6b4 591 SUPERFAMILY SSF82171 26 397 3.92E-18 T 13-10-2018 BEN78_15180 b619512beef37626236ab7b178c4b6b4 591 Gene3D G3DSA:3.40.50.1820 372 580 5.9E-17 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_02235 0f7b7f3e33df8fbe72c3e266ac2ccf69 814 Gene3D G3DSA:2.170.130.10 34 170 1.8E-39 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_02235 0f7b7f3e33df8fbe72c3e266ac2ccf69 814 Pfam PF00593 TonB dependent receptor 356 813 5.2E-54 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_02235 0f7b7f3e33df8fbe72c3e266ac2ccf69 814 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 46 - T 13-10-2018 IPR010916 TonB box, conserved site BEN78_02235 0f7b7f3e33df8fbe72c3e266ac2ccf69 814 SUPERFAMILY SSF56935 39 814 1.16E-121 T 13-10-2018 BEN78_02235 0f7b7f3e33df8fbe72c3e266ac2ccf69 814 Gene3D G3DSA:2.40.170.20 420 814 6.0E-102 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_02235 0f7b7f3e33df8fbe72c3e266ac2ccf69 814 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 165 4.1E-27 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_04585 4d37c682234f22d1a26ce81e87435db1 212 SUPERFAMILY SSF52172 1 155 6.08E-26 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_04585 4d37c682234f22d1a26ce81e87435db1 212 SMART SM00421 146 203 2.0E-22 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_04585 4d37c682234f22d1a26ce81e87435db1 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 202 8.5E-20 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_04585 4d37c682234f22d1a26ce81e87435db1 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_04585 4d37c682234f22d1a26ce81e87435db1 212 Gene3D G3DSA:3.40.50.12740 5 206 4.9E-49 T 13-10-2018 BEN78_04585 4d37c682234f22d1a26ce81e87435db1 212 Pfam PF00072 Response regulator receiver domain 6 118 2.3E-19 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_04585 4d37c682234f22d1a26ce81e87435db1 212 SUPERFAMILY SSF46894 141 202 2.25E-17 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BEN78_04585 4d37c682234f22d1a26ce81e87435db1 212 SMART SM00448 4 118 3.8E-18 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_04585 4d37c682234f22d1a26ce81e87435db1 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 7.3E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_04585 4d37c682234f22d1a26ce81e87435db1 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 7.3E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_04585 4d37c682234f22d1a26ce81e87435db1 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 7.3E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN78_02715 7f24dec431c14eec57b3c0f6aaa785cc 109 Pfam PF13103 TonB C terminal 22 89 5.2E-6 T 13-10-2018 BEN78_02715 7f24dec431c14eec57b3c0f6aaa785cc 109 Gene3D G3DSA:3.30.1150.10 10 108 7.6E-14 T 13-10-2018 BEN78_02715 7f24dec431c14eec57b3c0f6aaa785cc 109 SUPERFAMILY SSF74653 21 105 2.94E-9 T 13-10-2018 BEN78_13620 52c0a417ab5ca8dcd247f29e331d04ca 291 Gene3D G3DSA:3.40.50.300 4 237 1.1E-44 T 13-10-2018 BEN78_13620 52c0a417ab5ca8dcd247f29e331d04ca 291 Pfam PF00005 ABC transporter 27 162 2.3E-18 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_13620 52c0a417ab5ca8dcd247f29e331d04ca 291 SMART SM00382 34 212 1.6E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_13620 52c0a417ab5ca8dcd247f29e331d04ca 291 SUPERFAMILY SSF52540 8 225 7.14E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_16445 aa1d3ef6db1f9ae89c799fc2ca353123 707 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 54 707 5.7E-111 T 13-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 BEN78_16445 aa1d3ef6db1f9ae89c799fc2ca353123 707 SUPERFAMILY SSF56935 27 707 5.19E-126 T 13-10-2018 BEN78_16445 aa1d3ef6db1f9ae89c799fc2ca353123 707 Gene3D G3DSA:2.170.130.10 31 156 2.5E-32 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_16445 aa1d3ef6db1f9ae89c799fc2ca353123 707 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 690 707 - T 13-10-2018 IPR010917 TonB-dependent receptor, conserved site BEN78_16445 aa1d3ef6db1f9ae89c799fc2ca353123 707 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 149 9.6E-16 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_16445 aa1d3ef6db1f9ae89c799fc2ca353123 707 Pfam PF00593 TonB dependent receptor 263 705 1.9E-50 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_16445 aa1d3ef6db1f9ae89c799fc2ca353123 707 Gene3D G3DSA:2.40.170.20 157 707 6.2E-153 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_04215 390a2802e7698d8fd2d9fc06d0dea43a 169 Gene3D G3DSA:3.10.129.10 1 169 7.5E-64 T 13-10-2018 BEN78_04215 390a2802e7698d8fd2d9fc06d0dea43a 169 SUPERFAMILY SSF54637 3 163 1.86E-53 T 13-10-2018 IPR029069 HotDog domain superfamily BEN78_04215 390a2802e7698d8fd2d9fc06d0dea43a 169 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 2 168 6.2E-86 T 13-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BEN78_04215 390a2802e7698d8fd2d9fc06d0dea43a 169 Pfam PF07977 FabA-like domain 26 155 2.0E-50 T 13-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BEN78_03950 f1136dbe1bc47b4e64cecb25b4a25df0 214 Pfam PF13835 Domain of unknown function (DUF4194) 27 184 1.9E-23 T 13-10-2018 IPR025449 Protein of unknown function DUF4194 BEN78_10955 c4f1ece9cc9bdc982d894e3d9785e9c8 225 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 10 213 1.9E-26 T 13-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 BEN78_10955 c4f1ece9cc9bdc982d894e3d9785e9c8 225 Gene3D G3DSA:2.50.20.10 37 214 2.1E-37 T 13-10-2018 BEN78_10955 c4f1ece9cc9bdc982d894e3d9785e9c8 225 Pfam PF03550 Outer membrane lipoprotein LolB 57 212 4.5E-38 T 13-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 BEN78_10955 c4f1ece9cc9bdc982d894e3d9785e9c8 225 SUPERFAMILY SSF89392 43 214 6.67E-35 T 13-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX BEN78_10955 c4f1ece9cc9bdc982d894e3d9785e9c8 225 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 2 214 21.475 T 13-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 BEN78_06115 ca0d642173b67ed477f1e3a96f4313c2 622 Pfam PF05960 Bacterial protein of unknown function (DUF885) 63 612 6.1E-176 T 13-10-2018 IPR010281 Protein of unknown function DUF885 BEN78_06075 d1702d39384ccf77cf6fd07731ba3a30 460 SMART SM00487 24 221 3.2E-55 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN78_06075 d1702d39384ccf77cf6fd07731ba3a30 460 Pfam PF00271 Helicase conserved C-terminal domain 234 338 5.6E-28 T 13-10-2018 IPR001650 Helicase, C-terminal BEN78_06075 d1702d39384ccf77cf6fd07731ba3a30 460 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BEN78_06075 d1702d39384ccf77cf6fd07731ba3a30 460 SMART SM00490 257 338 7.8E-28 T 13-10-2018 IPR001650 Helicase, C-terminal BEN78_06075 d1702d39384ccf77cf6fd07731ba3a30 460 Gene3D G3DSA:3.40.50.300 1 211 6.3E-73 T 13-10-2018 BEN78_06075 d1702d39384ccf77cf6fd07731ba3a30 460 Gene3D G3DSA:3.30.70.330 390 460 3.9E-21 T 13-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily BEN78_06075 d1702d39384ccf77cf6fd07731ba3a30 460 Pfam PF00270 DEAD/DEAH box helicase 29 194 1.5E-45 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BEN78_06075 d1702d39384ccf77cf6fd07731ba3a30 460 SUPERFAMILY SSF52540 74 354 7.78E-68 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_06075 d1702d39384ccf77cf6fd07731ba3a30 460 Pfam PF03880 DbpA RNA binding domain 388 458 2.2E-24 T 13-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain BEN78_06075 d1702d39384ccf77cf6fd07731ba3a30 460 Gene3D G3DSA:3.40.50.300 227 389 1.3E-43 T 13-10-2018 BEN78_08050 8d8d236151b9d3b34f597e621d6ea326 346 SUPERFAMILY SSF55347 130 278 1.96E-29 T 13-10-2018 BEN78_08050 8d8d236151b9d3b34f597e621d6ea326 346 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 238 1.0E-11 T 13-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 BEN78_08050 8d8d236151b9d3b34f597e621d6ea326 346 SUPERFAMILY SSF51735 3 157 2.23E-44 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_08050 8d8d236151b9d3b34f597e621d6ea326 346 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 121 1.9E-22 T 13-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 BEN78_08050 8d8d236151b9d3b34f597e621d6ea326 346 Gene3D G3DSA:3.30.360.10 127 338 6.2E-124 T 13-10-2018 BEN78_08050 8d8d236151b9d3b34f597e621d6ea326 346 Gene3D G3DSA:3.40.50.720 6 317 6.2E-124 T 13-10-2018 BEN78_16740 4e9491cf431f07a4de846df6dd3718b8 336 PRINTS PR00101 Aspartate carbamoyltransferase signature 316 330 1.4E-10 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BEN78_16740 4e9491cf431f07a4de846df6dd3718b8 336 PRINTS PR00101 Aspartate carbamoyltransferase signature 148 165 1.4E-10 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BEN78_16740 4e9491cf431f07a4de846df6dd3718b8 336 PRINTS PR00101 Aspartate carbamoyltransferase signature 36 58 1.4E-10 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BEN78_16740 4e9491cf431f07a4de846df6dd3718b8 336 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 171 333 1.3E-32 T 13-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 BEN78_16740 4e9491cf431f07a4de846df6dd3718b8 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 300 323 5.0E-13 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BEN78_16740 4e9491cf431f07a4de846df6dd3718b8 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 46 65 5.0E-13 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BEN78_16740 4e9491cf431f07a4de846df6dd3718b8 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 288 297 5.0E-13 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BEN78_16740 4e9491cf431f07a4de846df6dd3718b8 336 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 5 162 2.9E-36 T 13-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 BEN78_16740 4e9491cf431f07a4de846df6dd3718b8 336 SUPERFAMILY SSF53671 3 335 2.62E-73 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 BEN78_16740 4e9491cf431f07a4de846df6dd3718b8 336 Gene3D G3DSA:3.40.50.1370 6 168 9.4E-118 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 BEN78_16740 4e9491cf431f07a4de846df6dd3718b8 336 Gene3D G3DSA:3.40.50.1370 169 332 9.4E-118 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 BEN78_02710 dbecf8e533b7f562446752cb98b0937c 440 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 9 433 50.303 T 13-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 BEN78_02710 dbecf8e533b7f562446752cb98b0937c 440 SUPERFAMILY SSF69304 158 435 8.5E-56 T 13-10-2018 BEN78_02710 dbecf8e533b7f562446752cb98b0937c 440 Gene3D G3DSA:3.40.50.10070 25 168 3.4E-43 T 13-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 BEN78_02710 dbecf8e533b7f562446752cb98b0937c 440 SUPERFAMILY SSF52964 33 165 1.96E-37 T 13-10-2018 BEN78_02710 dbecf8e533b7f562446752cb98b0937c 440 Pfam PF04052 TolB amino-terminal domain 28 133 2.6E-31 T 13-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 BEN78_02710 dbecf8e533b7f562446752cb98b0937c 440 Gene3D G3DSA:2.120.10.30 169 440 3.3E-92 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BEN78_02710 dbecf8e533b7f562446752cb98b0937c 440 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 20 434 2.2E-159 T 13-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 BEN78_02710 dbecf8e533b7f562446752cb98b0937c 440 Pfam PF07676 WD40-like Beta Propeller Repeat 209 233 3.1E-7 T 13-10-2018 IPR011659 WD40-like Beta Propeller BEN78_02710 dbecf8e533b7f562446752cb98b0937c 440 Pfam PF07676 WD40-like Beta Propeller Repeat 285 321 2.9E-11 T 13-10-2018 IPR011659 WD40-like Beta Propeller BEN78_02710 dbecf8e533b7f562446752cb98b0937c 440 Pfam PF07676 WD40-like Beta Propeller Repeat 244 277 9.3E-9 T 13-10-2018 IPR011659 WD40-like Beta Propeller BEN78_16835 4e9053cbfed38470b2e30469d4a0f2a2 368 SUPERFAMILY SSF63380 38 142 4.76E-19 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BEN78_16835 4e9053cbfed38470b2e30469d4a0f2a2 368 Gene3D G3DSA:3.40.50.80 144 275 7.5E-26 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BEN78_16835 4e9053cbfed38470b2e30469d4a0f2a2 368 Pfam PF00970 Oxidoreductase FAD-binding domain 60 135 3.1E-10 T 13-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 BEN78_16835 4e9053cbfed38470b2e30469d4a0f2a2 368 Pfam PF00175 Oxidoreductase NAD-binding domain 152 257 4.4E-14 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 BEN78_16835 4e9053cbfed38470b2e30469d4a0f2a2 368 PRINTS PR00410 Phenol hydroxylase reductase family signature 72 84 2.3E-6 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BEN78_16835 4e9053cbfed38470b2e30469d4a0f2a2 368 PRINTS PR00410 Phenol hydroxylase reductase family signature 151 170 2.3E-6 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BEN78_16835 4e9053cbfed38470b2e30469d4a0f2a2 368 PRINTS PR00410 Phenol hydroxylase reductase family signature 243 251 2.3E-6 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BEN78_16835 4e9053cbfed38470b2e30469d4a0f2a2 368 SUPERFAMILY SSF52343 147 262 1.96E-26 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BEN78_16835 4e9053cbfed38470b2e30469d4a0f2a2 368 Gene3D G3DSA:2.40.30.10 40 138 9.8E-17 T 13-10-2018 BEN78_16835 4e9053cbfed38470b2e30469d4a0f2a2 368 Gene3D G3DSA:3.10.20.30 279 368 8.3E-13 T 13-10-2018 IPR012675 Beta-grasp domain superfamily BEN78_16835 4e9053cbfed38470b2e30469d4a0f2a2 368 SUPERFAMILY SSF54292 267 368 3.67E-16 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 BEN78_01385 6d2b1709ed041631eca14745b8aecb2e 358 Gene3D G3DSA:1.10.10.10 2 119 4.7E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_01385 6d2b1709ed041631eca14745b8aecb2e 358 SUPERFAMILY SSF53850 119 324 4.87E-10 T 13-10-2018 BEN78_01385 6d2b1709ed041631eca14745b8aecb2e 358 Gene3D G3DSA:3.40.190.10 193 298 9.9E-6 T 13-10-2018 BEN78_01385 6d2b1709ed041631eca14745b8aecb2e 358 Pfam PF12727 PBP superfamily domain 142 323 3.0E-44 T 13-10-2018 IPR024370 PBP domain BEN78_01385 6d2b1709ed041631eca14745b8aecb2e 358 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 82 4.3E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_01385 6d2b1709ed041631eca14745b8aecb2e 358 SUPERFAMILY SSF46785 5 136 6.8E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_07445 43ba5aee5cc4fbc152280c34bb9cc3db 65 Pfam PF09856 Predicted transcriptional regulator (DUF2083) 4 58 8.2E-19 T 13-10-2018 IPR018653 Domain of unknown function DUF2083,transcriptional regulator BEN78_11585 843fd0dd2e0fc7f61a3a82c1269113da 151 Pfam PF09278 MerR, DNA binding 54 119 1.7E-19 T 13-10-2018 IPR015358 Transcription regulator MerR, DNA binding BEN78_11585 843fd0dd2e0fc7f61a3a82c1269113da 151 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 11 150 2.0E-69 T 13-10-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 BEN78_11585 843fd0dd2e0fc7f61a3a82c1269113da 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 24 37 2.0E-12 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN78_11585 843fd0dd2e0fc7f61a3a82c1269113da 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 24 2.0E-12 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN78_11585 843fd0dd2e0fc7f61a3a82c1269113da 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 47 67 2.0E-12 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN78_11585 843fd0dd2e0fc7f61a3a82c1269113da 151 SMART SM00422 12 80 2.7E-25 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN78_11585 843fd0dd2e0fc7f61a3a82c1269113da 151 Pfam PF00376 MerR family regulatory protein 13 49 1.8E-13 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN78_11585 843fd0dd2e0fc7f61a3a82c1269113da 151 SUPERFAMILY SSF46955 12 122 5.13E-29 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily BEN78_11585 843fd0dd2e0fc7f61a3a82c1269113da 151 ProSitePatterns PS00552 MerR-type HTH domain signature. 15 37 - T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN78_11585 843fd0dd2e0fc7f61a3a82c1269113da 151 Gene3D G3DSA:1.10.1660.10 6 135 3.0E-35 T 13-10-2018 BEN78_14655 972037a8ced366c7a987ffe72aee6ca7 211 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 74 209 7.2E-37 T 13-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal BEN78_14655 972037a8ced366c7a987ffe72aee6ca7 211 Gene3D G3DSA:3.90.1210.10 84 150 3.6E-14 T 13-10-2018 BEN78_14655 972037a8ced366c7a987ffe72aee6ca7 211 SMART SM00858 86 148 1.3E-8 T 13-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 BEN78_14655 972037a8ced366c7a987ffe72aee6ca7 211 Gene3D G3DSA:2.30.30.760 151 211 1.4E-9 T 13-10-2018 BEN78_14655 972037a8ced366c7a987ffe72aee6ca7 211 Pfam PF13144 Chaperone for flagella basal body P-ring formation 42 209 7.1E-37 T 13-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal BEN78_14065 03af7b19cd3dea0462ef9d2350560992 201 SUPERFAMILY SSF50182 105 180 3.07E-9 T 13-10-2018 IPR010920 LSM domain superfamily BEN78_14065 03af7b19cd3dea0462ef9d2350560992 201 Pfam PF00924 Mechanosensitive ion channel 60 180 9.6E-14 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 BEN78_09670 f678d2d6c58f7194ea6ce86fd2707c7a 377 Pfam PF10933 Protein of unknown function (DUF2827) 8 367 8.9E-139 T 13-10-2018 IPR021234 Protein of unknown function DUF2827 BEN78_09760 5eb561febd6587122a34864ae9fc61cd 628 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 586 612 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN78_09760 5eb561febd6587122a34864ae9fc61cd 628 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 417 430 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN78_09760 5eb561febd6587122a34864ae9fc61cd 628 SUPERFAMILY SSF88659 523 625 8.72E-28 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN78_09760 5eb561febd6587122a34864ae9fc61cd 628 Gene3D G3DSA:1.10.10.10 466 542 4.3E-33 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_09760 5eb561febd6587122a34864ae9fc61cd 628 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 389 614 3.5E-38 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BEN78_09760 5eb561febd6587122a34864ae9fc61cd 628 SUPERFAMILY SSF88946 121 460 9.94E-98 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BEN78_09760 5eb561febd6587122a34864ae9fc61cd 628 Pfam PF03979 Sigma-70 factor, region 1.1 8 87 5.0E-28 T 13-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 BEN78_09760 5eb561febd6587122a34864ae9fc61cd 628 Pfam PF04545 Sigma-70, region 4 561 614 1.9E-19 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 BEN78_09760 5eb561febd6587122a34864ae9fc61cd 628 Pfam PF00140 Sigma-70 factor, region 1.2 104 135 5.1E-13 T 13-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BEN78_09760 5eb561febd6587122a34864ae9fc61cd 628 Gene3D G3DSA:1.10.10.10 543 626 1.4E-36 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_09760 5eb561febd6587122a34864ae9fc61cd 628 Gene3D G3DSA:1.10.601.10 119 462 3.2E-123 T 13-10-2018 BEN78_09760 5eb561febd6587122a34864ae9fc61cd 628 Pfam PF04546 Sigma-70, non-essential region 145 362 2.6E-51 T 13-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BEN78_09760 5eb561febd6587122a34864ae9fc61cd 628 SUPERFAMILY SSF88659 466 539 2.45E-21 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN78_09760 5eb561febd6587122a34864ae9fc61cd 628 Pfam PF04539 Sigma-70 region 3 472 547 2.1E-30 T 13-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 BEN78_09760 5eb561febd6587122a34864ae9fc61cd 628 Pfam PF04542 Sigma-70 region 2 393 462 1.4E-21 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BEN78_09760 5eb561febd6587122a34864ae9fc61cd 628 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 7 626 45.835 T 13-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 BEN78_09760 5eb561febd6587122a34864ae9fc61cd 628 PRINTS PR00046 Major sigma-70 factor signature 601 612 3.4E-31 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN78_09760 5eb561febd6587122a34864ae9fc61cd 628 PRINTS PR00046 Major sigma-70 factor signature 565 577 3.4E-31 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN78_09760 5eb561febd6587122a34864ae9fc61cd 628 PRINTS PR00046 Major sigma-70 factor signature 441 449 3.4E-31 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN78_09760 5eb561febd6587122a34864ae9fc61cd 628 PRINTS PR00046 Major sigma-70 factor signature 586 601 3.4E-31 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN78_09760 5eb561febd6587122a34864ae9fc61cd 628 PRINTS PR00046 Major sigma-70 factor signature 417 430 3.4E-31 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN78_09760 5eb561febd6587122a34864ae9fc61cd 628 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 389 625 3.8E-121 T 13-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 BEN78_09760 5eb561febd6587122a34864ae9fc61cd 628 Gene3D G3DSA:1.10.220.120 5 67 5.3E-27 T 13-10-2018 BEN78_01850 56d26f1751b34a0f2be32881cb7d9110 905 SMART SM00642 388 732 6.9E-4 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BEN78_01850 56d26f1751b34a0f2be32881cb7d9110 905 SUPERFAMILY SSF81296 170 274 1.68E-20 T 13-10-2018 IPR014756 Immunoglobulin E-set BEN78_01850 56d26f1751b34a0f2be32881cb7d9110 905 SUPERFAMILY SSF81296 44 162 3.36E-16 T 13-10-2018 IPR014756 Immunoglobulin E-set BEN78_01850 56d26f1751b34a0f2be32881cb7d9110 905 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 173 257 4.6E-12 T 13-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 BEN78_01850 56d26f1751b34a0f2be32881cb7d9110 905 SUPERFAMILY SSF51011 792 895 1.51E-7 T 13-10-2018 BEN78_01850 56d26f1751b34a0f2be32881cb7d9110 905 Gene3D G3DSA:2.60.40.10 164 271 2.7E-25 T 13-10-2018 IPR013783 Immunoglobulin-like fold BEN78_01850 56d26f1751b34a0f2be32881cb7d9110 905 Pfam PF11852 Domain of unknown function (DUF3372) 732 892 8.3E-37 T 13-10-2018 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal BEN78_01850 56d26f1751b34a0f2be32881cb7d9110 905 Gene3D G3DSA:3.20.20.80 272 820 4.7E-190 T 13-10-2018 BEN78_01850 56d26f1751b34a0f2be32881cb7d9110 905 Gene3D G3DSA:2.60.40.1180 821 895 7.9E-12 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta BEN78_01850 56d26f1751b34a0f2be32881cb7d9110 905 SUPERFAMILY SSF51445 269 789 3.49E-114 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily BEN78_01850 56d26f1751b34a0f2be32881cb7d9110 905 Gene3D G3DSA:2.60.40.1130 43 162 6.6E-23 T 13-10-2018 BEN78_11560 8483c65efa21a8a755cd657340942dd5 176 Gene3D G3DSA:3.40.50.150 26 176 8.7E-50 T 13-10-2018 BEN78_11560 8483c65efa21a8a755cd657340942dd5 176 SUPERFAMILY SSF53335 28 150 2.11E-30 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_11560 8483c65efa21a8a755cd657340942dd5 176 Pfam PF13847 Methyltransferase domain 50 150 8.5E-9 T 13-10-2018 IPR025714 Methyltransferase domain BEN78_02200 50a3c9f8c6d80ab74dde5923ae1c2cdb 487 SUPERFAMILY SSF101960 43 484 4.58E-137 T 13-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily BEN78_02200 50a3c9f8c6d80ab74dde5923ae1c2cdb 487 Pfam PF01458 Uncharacterized protein family (UPF0051) 225 458 1.3E-67 T 13-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 BEN78_02200 50a3c9f8c6d80ab74dde5923ae1c2cdb 487 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 23 478 7.3E-192 T 13-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 BEN78_16365 710971402830afde089ac5819af7a8d3 449 SUPERFAMILY SSF56322 9 446 1.96E-123 T 13-10-2018 IPR005801 ADC synthase GO:0009058 BEN78_16365 710971402830afde089ac5819af7a8d3 449 Pfam PF00425 chorismate binding enzyme 185 437 3.6E-92 T 13-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal BEN78_16365 710971402830afde089ac5819af7a8d3 449 TIGRFAM TIGR01824 PabB-clade2: aminodeoxychorismate synthase, component I 95 439 1.4E-127 T 13-10-2018 IPR010118 Para-aminobenzoate synthase/anthranilate synthase, component I BEN78_16365 710971402830afde089ac5819af7a8d3 449 Gene3D G3DSA:3.60.120.10 1 448 7.9E-161 T 13-10-2018 IPR005801 ADC synthase GO:0009058 BEN78_16365 710971402830afde089ac5819af7a8d3 449 Pfam PF04715 Anthranilate synthase component I, N terminal region 16 142 3.6E-6 T 13-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BEN78_16365 710971402830afde089ac5819af7a8d3 449 PRINTS PR00095 Anthranilate synthase component I signature 285 298 6.0E-18 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BEN78_16365 710971402830afde089ac5819af7a8d3 449 PRINTS PR00095 Anthranilate synthase component I signature 379 393 6.0E-18 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BEN78_16365 710971402830afde089ac5819af7a8d3 449 PRINTS PR00095 Anthranilate synthase component I signature 299 312 6.0E-18 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BEN78_16365 710971402830afde089ac5819af7a8d3 449 PRINTS PR00095 Anthranilate synthase component I signature 394 408 6.0E-18 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BEN78_01825 2b31386de8d3c75604fba3c1d2bcdfd5 249 Gene3D G3DSA:1.10.10.10 165 246 4.5E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_01825 2b31386de8d3c75604fba3c1d2bcdfd5 249 SUPERFAMILY SSF51206 28 154 1.07E-22 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like BEN78_01825 2b31386de8d3c75604fba3c1d2bcdfd5 249 Gene3D G3DSA:2.60.120.10 47 162 2.5E-32 T 13-10-2018 IPR014710 RmlC-like jelly roll fold BEN78_01825 2b31386de8d3c75604fba3c1d2bcdfd5 249 SMART SM00100 33 154 1.3E-11 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain BEN78_01825 2b31386de8d3c75604fba3c1d2bcdfd5 249 Pfam PF13545 Crp-like helix-turn-helix domain 168 241 1.0E-15 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BEN78_01825 2b31386de8d3c75604fba3c1d2bcdfd5 249 Pfam PF00027 Cyclic nucleotide-binding domain 55 128 2.4E-13 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain BEN78_01825 2b31386de8d3c75604fba3c1d2bcdfd5 249 SUPERFAMILY SSF46785 165 243 3.06E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_01825 2b31386de8d3c75604fba3c1d2bcdfd5 249 SMART SM00419 187 235 6.5E-10 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BEN78_01825 2b31386de8d3c75604fba3c1d2bcdfd5 249 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 8.9E-7 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BEN78_01825 2b31386de8d3c75604fba3c1d2bcdfd5 249 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 8.9E-7 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BEN78_09205 eb14b0db8e2d802f6d35a6d9846ea555 546 SUPERFAMILY SSF52029 184 376 6.98E-83 T 13-10-2018 IPR027409 GroEL-like apical domain superfamily BEN78_09205 eb14b0db8e2d802f6d35a6d9846ea555 546 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 13-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BEN78_09205 eb14b0db8e2d802f6d35a6d9846ea555 546 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 1.4E-255 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BEN78_09205 eb14b0db8e2d802f6d35a6d9846ea555 546 Hamap MF_00600 60 kDa chaperonin [groL]. 2 544 41.571 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BEN78_09205 eb14b0db8e2d802f6d35a6d9846ea555 546 Gene3D G3DSA:1.10.560.10 8 521 6.0E-239 T 13-10-2018 IPR027413 GroEL-like equatorial domain superfamily BEN78_09205 eb14b0db8e2d802f6d35a6d9846ea555 546 SUPERFAMILY SSF48592 7 521 1.37E-78 T 13-10-2018 IPR027413 GroEL-like equatorial domain superfamily BEN78_09205 eb14b0db8e2d802f6d35a6d9846ea555 546 PRINTS PR00298 60kDa chaperonin signature 398 419 8.2E-75 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BEN78_09205 eb14b0db8e2d802f6d35a6d9846ea555 546 PRINTS PR00298 60kDa chaperonin signature 350 375 8.2E-75 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BEN78_09205 eb14b0db8e2d802f6d35a6d9846ea555 546 PRINTS PR00298 60kDa chaperonin signature 268 291 8.2E-75 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BEN78_09205 eb14b0db8e2d802f6d35a6d9846ea555 546 PRINTS PR00298 60kDa chaperonin signature 27 53 8.2E-75 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BEN78_09205 eb14b0db8e2d802f6d35a6d9846ea555 546 PRINTS PR00298 60kDa chaperonin signature 83 110 8.2E-75 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BEN78_09205 eb14b0db8e2d802f6d35a6d9846ea555 546 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 522 3.2E-95 T 13-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 BEN78_09205 eb14b0db8e2d802f6d35a6d9846ea555 546 Gene3D G3DSA:3.50.7.10 192 372 6.0E-239 T 13-10-2018 IPR027409 GroEL-like apical domain superfamily BEN78_09205 eb14b0db8e2d802f6d35a6d9846ea555 546 Gene3D G3DSA:3.30.260.10 136 410 6.0E-239 T 13-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily BEN78_09205 eb14b0db8e2d802f6d35a6d9846ea555 546 SUPERFAMILY SSF54849 138 203 2.11E-23 T 13-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily BEN78_11800 04f5cf0f880479ae3f486f5eb79beec7 627 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 626 44.836 T 13-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 BEN78_11800 04f5cf0f880479ae3f486f5eb79beec7 627 Gene3D G3DSA:1.20.1640.10 449 624 5.1E-15 T 13-10-2018 BEN78_11800 04f5cf0f880479ae3f486f5eb79beec7 627 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 612 2.2E-128 T 13-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 BEN78_11800 04f5cf0f880479ae3f486f5eb79beec7 627 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 357 605 1.2E-65 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BEN78_11800 04f5cf0f880479ae3f486f5eb79beec7 627 Pfam PF02355 Protein export membrane protein 447 615 5.5E-19 T 13-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial BEN78_11800 04f5cf0f880479ae3f486f5eb79beec7 627 Pfam PF13721 SecD export protein N-terminal TM region 2 103 3.4E-29 T 13-10-2018 IPR027398 SecD export protein N-terminal TM domain BEN78_11800 04f5cf0f880479ae3f486f5eb79beec7 627 Gene3D G3DSA:3.30.1360.200 287 443 1.6E-46 T 13-10-2018 BEN78_11800 04f5cf0f880479ae3f486f5eb79beec7 627 PRINTS PR00702 Acriflavin resistance protein family signature 461 484 4.5E-7 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_11800 04f5cf0f880479ae3f486f5eb79beec7 627 PRINTS PR00702 Acriflavin resistance protein family signature 589 612 4.5E-7 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_11800 04f5cf0f880479ae3f486f5eb79beec7 627 PRINTS PR00702 Acriflavin resistance protein family signature 514 538 4.5E-7 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_11800 04f5cf0f880479ae3f486f5eb79beec7 627 SUPERFAMILY SSF82866 422 620 1.7E-40 T 13-10-2018 BEN78_11800 04f5cf0f880479ae3f486f5eb79beec7 627 Gene3D G3DSA:3.30.70.3400 228 448 1.6E-46 T 13-10-2018 BEN78_11800 04f5cf0f880479ae3f486f5eb79beec7 627 Pfam PF07549 SecD/SecF GG Motif 117 141 4.2E-8 T 13-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site BEN78_11275 986e0e7f5b9bed4649322966b5edec27 386 Gene3D G3DSA:1.10.230.10 234 332 1.5E-123 T 13-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain BEN78_11275 986e0e7f5b9bed4649322966b5edec27 386 PRINTS PR00143 Citrate synthase signature 136 149 7.0E-37 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 BEN78_11275 986e0e7f5b9bed4649322966b5edec27 386 PRINTS PR00143 Citrate synthase signature 186 201 7.0E-37 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 BEN78_11275 986e0e7f5b9bed4649322966b5edec27 386 PRINTS PR00143 Citrate synthase signature 208 236 7.0E-37 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 BEN78_11275 986e0e7f5b9bed4649322966b5edec27 386 PRINTS PR00143 Citrate synthase signature 318 334 7.0E-37 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 BEN78_11275 986e0e7f5b9bed4649322966b5edec27 386 PRINTS PR00143 Citrate synthase signature 261 281 7.0E-37 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 BEN78_11275 986e0e7f5b9bed4649322966b5edec27 386 PRINTS PR00143 Citrate synthase signature 338 352 7.0E-37 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 BEN78_11275 986e0e7f5b9bed4649322966b5edec27 386 ProSitePatterns PS00480 Citrate synthase signature. 268 280 - T 13-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 BEN78_11275 986e0e7f5b9bed4649322966b5edec27 386 PIRSF PIRSF001369 12 386 1.7E-109 T 13-10-2018 IPR024176 Citrate synthase, bacterial-type BEN78_11275 986e0e7f5b9bed4649322966b5edec27 386 Gene3D G3DSA:1.10.580.10 39 365 1.5E-123 T 13-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 BEN78_11275 986e0e7f5b9bed4649322966b5edec27 386 SUPERFAMILY SSF48256 19 379 1.83E-122 T 13-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 BEN78_11275 986e0e7f5b9bed4649322966b5edec27 386 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 18 385 2.0E-151 T 13-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 BEN78_11275 986e0e7f5b9bed4649322966b5edec27 386 Pfam PF00285 Citrate synthase, C-terminal domain 19 367 2.1E-112 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 BEN78_13625 b0b32836ca0696da0d1464cf0f33f048 123 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 75 4.4E-15 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN78_13625 b0b32836ca0696da0d1464cf0f33f048 123 Gene3D G3DSA:1.10.10.10 9 122 6.9E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_13625 b0b32836ca0696da0d1464cf0f33f048 123 SUPERFAMILY SSF46785 5 79 1.94E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_13625 b0b32836ca0696da0d1464cf0f33f048 123 SMART SM00345 16 75 7.4E-14 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN78_01440 e280eeb3eec8de02c9c6083c95dbbacb 432 SUPERFAMILY SSF103473 14 428 4.45E-81 T 13-10-2018 IPR036259 MFS transporter superfamily BEN78_01440 e280eeb3eec8de02c9c6083c95dbbacb 432 Pfam PF07690 Major Facilitator Superfamily 28 383 3.3E-58 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN78_01440 e280eeb3eec8de02c9c6083c95dbbacb 432 Gene3D G3DSA:1.20.1250.20 8 421 5.3E-85 T 13-10-2018 BEN78_13465 21e5e1dd47c4d49c360255f0c580e33b 140 Gene3D G3DSA:3.10.180.10 2 139 8.1E-32 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN78_13465 21e5e1dd47c4d49c360255f0c580e33b 140 SUPERFAMILY SSF54593 3 125 6.33E-23 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN78_13465 21e5e1dd47c4d49c360255f0c580e33b 140 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 120 1.5E-5 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BEN78_04190 6890b8ba6598898b96d2e262b2c2faa8 381 SUPERFAMILY SSF48179 166 269 3.06E-18 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BEN78_04190 6890b8ba6598898b96d2e262b2c2faa8 381 SUPERFAMILY SSF51735 18 162 2.02E-20 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_04190 6890b8ba6598898b96d2e262b2c2faa8 381 Gene3D G3DSA:3.40.50.720 10 170 4.0E-27 T 13-10-2018 BEN78_04190 6890b8ba6598898b96d2e262b2c2faa8 381 Gene3D G3DSA:1.10.3660.10 172 295 7.7E-13 T 13-10-2018 BEN78_04190 6890b8ba6598898b96d2e262b2c2faa8 381 SUPERFAMILY SSF55021 307 371 1.52E-6 T 13-10-2018 BEN78_04190 6890b8ba6598898b96d2e262b2c2faa8 381 Pfam PF01842 ACT domain 308 350 1.1E-6 T 13-10-2018 IPR002912 ACT domain BEN78_04190 6890b8ba6598898b96d2e262b2c2faa8 381 Pfam PF02153 Prephenate dehydrogenase 59 263 1.6E-21 T 13-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 BEN78_09175 2d04d29c23f46b2e691ee7576883d7ec 148 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 148 71.041 T 13-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BEN78_09175 2d04d29c23f46b2e691ee7576883d7ec 148 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 4 142 8.0E-54 T 13-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BEN78_09175 2d04d29c23f46b2e691ee7576883d7ec 148 Gene3D G3DSA:3.40.50.9100 1 146 8.9E-62 T 13-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BEN78_09175 2d04d29c23f46b2e691ee7576883d7ec 148 SUPERFAMILY SSF52304 3 145 3.53E-59 T 13-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BEN78_09175 2d04d29c23f46b2e691ee7576883d7ec 148 PIRSF PIRSF001399 1 146 3.4E-55 T 13-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BEN78_09175 2d04d29c23f46b2e691ee7576883d7ec 148 Pfam PF01220 Dehydroquinase class II 3 140 2.9E-57 T 13-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BEN78_09175 2d04d29c23f46b2e691ee7576883d7ec 148 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 13-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BEN78_09175 2d04d29c23f46b2e691ee7576883d7ec 148 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 5 143 2.0E-51 T 13-10-2018 BEN78_05990 83e13c0d5e46f2e6d27e5656a173b2cd 105 Gene3D G3DSA:1.10.260.40 12 85 8.0E-19 T 13-10-2018 BEN78_05990 83e13c0d5e46f2e6d27e5656a173b2cd 105 SUPERFAMILY SSF47413 18 82 4.69E-16 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN78_05990 83e13c0d5e46f2e6d27e5656a173b2cd 105 Pfam PF13560 Helix-turn-helix domain 18 75 2.5E-13 T 13-10-2018 BEN78_05990 83e13c0d5e46f2e6d27e5656a173b2cd 105 SMART SM00530 22 77 5.7E-10 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN78_02740 b24f935560a553298f4e91b44e22da1c 345 SMART SM00382 53 180 1.1E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_02740 b24f935560a553298f4e91b44e22da1c 345 Gene3D G3DSA:1.10.8.60 184 257 2.5E-31 T 13-10-2018 BEN78_02740 b24f935560a553298f4e91b44e22da1c 345 SUPERFAMILY SSF52540 22 254 1.69E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_02740 b24f935560a553298f4e91b44e22da1c 345 Gene3D G3DSA:1.10.10.10 259 338 1.3E-32 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_02740 b24f935560a553298f4e91b44e22da1c 345 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 252 331 8.0E-35 T 13-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 BEN78_02740 b24f935560a553298f4e91b44e22da1c 345 Gene3D G3DSA:3.40.50.300 20 183 2.7E-38 T 13-10-2018 BEN78_02740 b24f935560a553298f4e91b44e22da1c 345 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 255 328 4.7E-33 T 13-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 BEN78_02740 b24f935560a553298f4e91b44e22da1c 345 SUPERFAMILY SSF46785 259 331 1.46E-24 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_02740 b24f935560a553298f4e91b44e22da1c 345 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 345 179.475 T 13-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 BEN78_02740 b24f935560a553298f4e91b44e22da1c 345 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 26 328 9.9E-146 T 13-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 BEN78_02740 b24f935560a553298f4e91b44e22da1c 345 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 6 237 1.3E-119 T 13-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 BEN78_12185 e6833c3744b5a80bff0dc2cd24dba4cd 216 SUPERFAMILY SSF53335 1 196 7.5E-52 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_12185 e6833c3744b5a80bff0dc2cd24dba4cd 216 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 1 214 35.774 T 13-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 BEN78_12185 e6833c3744b5a80bff0dc2cd24dba4cd 216 Gene3D G3DSA:3.40.50.150 1 214 4.0E-55 T 13-10-2018 BEN78_12185 e6833c3744b5a80bff0dc2cd24dba4cd 216 PIRSF PIRSF023956 1 216 1.6E-69 T 13-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 BEN78_12185 e6833c3744b5a80bff0dc2cd24dba4cd 216 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 4 211 3.0E-75 T 13-10-2018 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 BEN78_12185 e6833c3744b5a80bff0dc2cd24dba4cd 216 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 1 212 1.6E-70 T 13-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 BEN78_06430 42062c7f68ac466e289c0950b4c92193 366 Gene3D G3DSA:3.10.150.10 122 248 1.9E-37 T 13-10-2018 BEN78_06430 42062c7f68ac466e289c0950b4c92193 366 SUPERFAMILY SSF55979 246 366 3.45E-32 T 13-10-2018 BEN78_06430 42062c7f68ac466e289c0950b4c92193 366 SUPERFAMILY SSF55979 127 244 5.1E-29 T 13-10-2018 BEN78_06430 42062c7f68ac466e289c0950b4c92193 366 SUPERFAMILY SSF55979 1 116 6.6E-27 T 13-10-2018 BEN78_06430 42062c7f68ac466e289c0950b4c92193 366 Gene3D G3DSA:3.10.150.10 249 366 6.3E-36 T 13-10-2018 BEN78_06430 42062c7f68ac466e289c0950b4c92193 366 Gene3D G3DSA:3.10.150.10 1 121 5.5E-41 T 13-10-2018 BEN78_06430 42062c7f68ac466e289c0950b4c92193 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 118 1.2E-36 T 13-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 BEN78_06430 42062c7f68ac466e289c0950b4c92193 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 1.2E-106 T 13-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 BEN78_06430 42062c7f68ac466e289c0950b4c92193 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 247 365 7.2E-34 T 13-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 BEN78_06430 42062c7f68ac466e289c0950b4c92193 366 PIRSF PIRSF000804 1 366 7.9E-119 T 13-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 BEN78_06430 42062c7f68ac466e289c0950b4c92193 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 243 6.8E-36 T 13-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 BEN78_06430 42062c7f68ac466e289c0950b4c92193 366 SMART SM00480 17 362 2.5E-133 T 13-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 BEN78_06550 7d0944611457056351e15a013d88ab89 127 SUPERFAMILY SSF50729 10 122 9.84E-33 T 13-10-2018 BEN78_06550 7d0944611457056351e15a013d88ab89 127 Pfam PF08000 Bacterial PH domain 12 120 4.9E-28 T 13-10-2018 IPR012544 Bacterial Pleckstrin homology domain BEN78_06550 7d0944611457056351e15a013d88ab89 127 Gene3D G3DSA:2.30.29.50 11 123 2.0E-31 T 13-10-2018 IPR037063 Bacterial Pleckstrin homology domain superfamily BEN78_16040 1902265418b278e2105f775bb4d085d4 200 Gene3D G3DSA:3.40.109.10 4 200 1.4E-78 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BEN78_16040 1902265418b278e2105f775bb4d085d4 200 Pfam PF00881 Nitroreductase family 13 178 7.2E-11 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 BEN78_16040 1902265418b278e2105f775bb4d085d4 200 SUPERFAMILY SSF55469 4 199 7.57E-66 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BEN78_15545 90e6c581b55c565154c7fa5a74c5390d 342 Pfam PF01565 FAD binding domain 30 154 1.3E-16 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 BEN78_15545 90e6c581b55c565154c7fa5a74c5390d 342 Gene3D G3DSA:3.90.78.10 228 342 1.3E-42 T 13-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BEN78_15545 90e6c581b55c565154c7fa5a74c5390d 342 SUPERFAMILY SSF56194 211 340 1.44E-45 T 13-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BEN78_15545 90e6c581b55c565154c7fa5a74c5390d 342 SUPERFAMILY SSF56176 12 195 3.05E-36 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BEN78_15545 90e6c581b55c565154c7fa5a74c5390d 342 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 342 80.131 T 13-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BEN78_15545 90e6c581b55c565154c7fa5a74c5390d 342 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 17 339 6.9E-63 T 13-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BEN78_15545 90e6c581b55c565154c7fa5a74c5390d 342 Gene3D G3DSA:3.30.43.10 3 72 3.4E-14 T 13-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 BEN78_15545 90e6c581b55c565154c7fa5a74c5390d 342 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 215 338 5.0E-35 T 13-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BEN78_15545 90e6c581b55c565154c7fa5a74c5390d 342 Gene3D G3DSA:3.30.465.10 74 227 5.0E-56 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 BEN78_09335 5a4e3bcd204f429a40d7ef23890bff97 577 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 394 408 - T 13-10-2018 IPR001482 Type II/IV secretion system protein BEN78_09335 5a4e3bcd204f429a40d7ef23890bff97 577 Gene3D G3DSA:3.40.50.300 302 576 5.3E-105 T 13-10-2018 BEN78_09335 5a4e3bcd204f429a40d7ef23890bff97 577 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 52 161 5.0E-18 T 13-10-2018 IPR007831 General secretory system II, protein E, N-terminal BEN78_09335 5a4e3bcd204f429a40d7ef23890bff97 577 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 95 574 1.7E-206 T 13-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 BEN78_09335 5a4e3bcd204f429a40d7ef23890bff97 577 Gene3D G3DSA:1.10.40.70 10 71 6.1E-22 T 13-10-2018 BEN78_09335 5a4e3bcd204f429a40d7ef23890bff97 577 SMART SM00382 327 448 4.4E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_09335 5a4e3bcd204f429a40d7ef23890bff97 577 SUPERFAMILY SSF160246 17 157 4.18E-30 T 13-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily BEN78_09335 5a4e3bcd204f429a40d7ef23890bff97 577 Pfam PF00437 Type II/IV secretion system protein 202 466 2.2E-85 T 13-10-2018 IPR001482 Type II/IV secretion system protein BEN78_09335 5a4e3bcd204f429a40d7ef23890bff97 577 Gene3D G3DSA:3.30.300.160 73 158 7.5E-28 T 13-10-2018 BEN78_09335 5a4e3bcd204f429a40d7ef23890bff97 577 Gene3D G3DSA:3.30.450.90 173 299 1.1E-48 T 13-10-2018 BEN78_09335 5a4e3bcd204f429a40d7ef23890bff97 577 SUPERFAMILY SSF52540 183 574 4.35E-94 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_13590 a6bfac7c60eacbbf9b2ecd0038f38ce0 471 ProSitePatterns PS00163 Fumarate lyases signature. 316 325 - T 13-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 BEN78_13590 a6bfac7c60eacbbf9b2ecd0038f38ce0 471 Pfam PF10415 Fumarase C C-terminus 407 460 7.7E-19 T 13-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BEN78_13590 a6bfac7c60eacbbf9b2ecd0038f38ce0 471 SUPERFAMILY SSF48557 10 456 7.23E-138 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 BEN78_13590 a6bfac7c60eacbbf9b2ecd0038f38ce0 471 Gene3D G3DSA:1.20.200.10 138 404 2.3E-101 T 13-10-2018 BEN78_13590 a6bfac7c60eacbbf9b2ecd0038f38ce0 471 Gene3D G3DSA:1.10.40.30 407 458 4.6E-19 T 13-10-2018 BEN78_13590 a6bfac7c60eacbbf9b2ecd0038f38ce0 471 Pfam PF00206 Lyase 18 341 6.7E-95 T 13-10-2018 IPR022761 Fumarate lyase, N-terminal BEN78_13590 a6bfac7c60eacbbf9b2ecd0038f38ce0 471 Gene3D G3DSA:1.10.275.10 11 137 1.0E-50 T 13-10-2018 IPR024083 Fumarase/histidase, N-terminal BEN78_13590 a6bfac7c60eacbbf9b2ecd0038f38ce0 471 Hamap MF_00743 Fumarate hydratase class II [fumC]. 10 461 77.506 T 13-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BEN78_13590 a6bfac7c60eacbbf9b2ecd0038f38ce0 471 PRINTS PR00149 Fumarate lyase superfamily signature 270 297 1.8E-32 T 13-10-2018 IPR000362 Fumarate lyase family BEN78_13590 a6bfac7c60eacbbf9b2ecd0038f38ce0 471 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 1.8E-32 T 13-10-2018 IPR000362 Fumarate lyase family BEN78_13590 a6bfac7c60eacbbf9b2ecd0038f38ce0 471 PRINTS PR00149 Fumarate lyase superfamily signature 179 197 1.8E-32 T 13-10-2018 IPR000362 Fumarate lyase family BEN78_13590 a6bfac7c60eacbbf9b2ecd0038f38ce0 471 PRINTS PR00149 Fumarate lyase superfamily signature 316 332 1.8E-32 T 13-10-2018 IPR000362 Fumarate lyase family BEN78_13590 a6bfac7c60eacbbf9b2ecd0038f38ce0 471 PRINTS PR00145 Argininosuccinate lyase family signature 316 332 1.0E-6 T 13-10-2018 BEN78_13590 a6bfac7c60eacbbf9b2ecd0038f38ce0 471 PRINTS PR00145 Argininosuccinate lyase family signature 174 194 1.0E-6 T 13-10-2018 BEN78_13590 a6bfac7c60eacbbf9b2ecd0038f38ce0 471 PRINTS PR00145 Argininosuccinate lyase family signature 132 154 1.0E-6 T 13-10-2018 BEN78_03135 877fc32598c128b9efc330587c034246 330 PIRSF PIRSF006470 1 324 1.3E-66 T 13-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 BEN78_03135 877fc32598c128b9efc330587c034246 330 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 41 313 3.0E-60 T 13-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 BEN78_03135 877fc32598c128b9efc330587c034246 330 Gene3D G3DSA:3.40.190.170 33 330 2.0E-84 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily BEN78_02645 ad298255b917dde12ee37fd9fbdf206c 620 SUPERFAMILY SSF52540 20 203 2.0E-41 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_02645 ad298255b917dde12ee37fd9fbdf206c 620 Gene3D G3DSA:3.40.50.300 215 346 1.2E-39 T 13-10-2018 BEN78_02645 ad298255b917dde12ee37fd9fbdf206c 620 Gene3D G3DSA:1.10.150.80 548 620 8.1E-24 T 13-10-2018 BEN78_02645 ad298255b917dde12ee37fd9fbdf206c 620 SUPERFAMILY SSF47819 544 618 2.18E-23 T 13-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 BEN78_02645 ad298255b917dde12ee37fd9fbdf206c 620 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 22 475 1.1E-159 T 13-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 BEN78_02645 ad298255b917dde12ee37fd9fbdf206c 620 Pfam PF16124 RecQ zinc-binding 349 416 5.4E-18 T 13-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain BEN78_02645 ad298255b917dde12ee37fd9fbdf206c 620 SMART SM00341 546 619 1.5E-11 T 13-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 BEN78_02645 ad298255b917dde12ee37fd9fbdf206c 620 Pfam PF00271 Helicase conserved C-terminal domain 232 336 5.0E-15 T 13-10-2018 IPR001650 Helicase, C-terminal BEN78_02645 ad298255b917dde12ee37fd9fbdf206c 620 Gene3D G3DSA:1.10.10.10 347 536 2.1E-52 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_02645 ad298255b917dde12ee37fd9fbdf206c 620 Gene3D G3DSA:3.40.50.300 12 214 1.2E-79 T 13-10-2018 BEN78_02645 ad298255b917dde12ee37fd9fbdf206c 620 Pfam PF09382 RQC domain 418 529 4.0E-44 T 13-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 BEN78_02645 ad298255b917dde12ee37fd9fbdf206c 620 SMART SM00956 423 526 5.4E-59 T 13-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 BEN78_02645 ad298255b917dde12ee37fd9fbdf206c 620 SMART SM00487 28 224 2.3E-26 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN78_02645 ad298255b917dde12ee37fd9fbdf206c 620 SUPERFAMILY SSF52540 214 466 8.36E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_02645 ad298255b917dde12ee37fd9fbdf206c 620 Pfam PF00570 HRDC domain 551 616 5.7E-22 T 13-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 BEN78_02645 ad298255b917dde12ee37fd9fbdf206c 620 Pfam PF00270 DEAD/DEAH box helicase 36 191 2.8E-16 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BEN78_02645 ad298255b917dde12ee37fd9fbdf206c 620 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 22 618 3.7E-259 T 13-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 BEN78_02645 ad298255b917dde12ee37fd9fbdf206c 620 SMART SM00490 256 337 1.1E-24 T 13-10-2018 IPR001650 Helicase, C-terminal BEN78_00185 c75330a3c201a1c7c32260a329eb8b49 133 Gene3D G3DSA:3.30.1330.40 1 130 1.2E-40 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BEN78_00185 c75330a3c201a1c7c32260a329eb8b49 133 SUPERFAMILY SSF55298 7 129 1.46E-35 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BEN78_00185 c75330a3c201a1c7c32260a329eb8b49 133 Pfam PF01042 Endoribonuclease L-PSP 13 127 7.7E-26 T 13-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 BEN78_02890 2e3015c6eb983ccfcc7483cf68c3939a 798 Gene3D G3DSA:2.170.130.10 32 175 1.4E-35 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_02890 2e3015c6eb983ccfcc7483cf68c3939a 798 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 171 8.9E-22 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_02890 2e3015c6eb983ccfcc7483cf68c3939a 798 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 43 - T 13-10-2018 IPR010916 TonB box, conserved site BEN78_02890 2e3015c6eb983ccfcc7483cf68c3939a 798 Gene3D G3DSA:2.40.170.20 308 775 7.4E-65 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_02890 2e3015c6eb983ccfcc7483cf68c3939a 798 SUPERFAMILY SSF56935 36 786 9.52E-110 T 13-10-2018 BEN78_02890 2e3015c6eb983ccfcc7483cf68c3939a 798 Pfam PF00593 TonB dependent receptor 294 768 1.2E-48 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_03285 51836033f1b61b9be88260cd8788918b 469 Pfam PF00483 Nucleotidyl transferase 6 287 1.2E-70 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 BEN78_03285 51836033f1b61b9be88260cd8788918b 469 Gene3D G3DSA:2.60.120.10 351 453 7.2E-19 T 13-10-2018 IPR014710 RmlC-like jelly roll fold BEN78_03285 51836033f1b61b9be88260cd8788918b 469 SUPERFAMILY SSF51182 185 469 3.56E-89 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily BEN78_03285 51836033f1b61b9be88260cd8788918b 469 Gene3D G3DSA:3.90.550.10 3 349 2.1E-119 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_03285 51836033f1b61b9be88260cd8788918b 469 Pfam PF01050 Mannose-6-phosphate isomerase 314 464 3.6E-71 T 13-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 BEN78_03285 51836033f1b61b9be88260cd8788918b 469 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 4 468 6.1E-218 T 13-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 BEN78_03285 51836033f1b61b9be88260cd8788918b 469 SUPERFAMILY SSF53448 4 281 6.31E-73 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_00415 436d94b8bb1e20cb83edcb5129e4e538 442 Pfam PF11808 Domain of unknown function (DUF3329) 8 93 1.8E-22 T 13-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 BEN78_00415 436d94b8bb1e20cb83edcb5129e4e538 442 Pfam PF13188 PAS domain 102 152 9.2E-6 T 13-10-2018 IPR000014 PAS domain BEN78_00415 436d94b8bb1e20cb83edcb5129e4e538 442 Gene3D G3DSA:3.30.565.10 279 434 4.5E-34 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_00415 436d94b8bb1e20cb83edcb5129e4e538 442 SUPERFAMILY SSF55785 89 164 1.05E-6 T 13-10-2018 IPR035965 PAS domain superfamily BEN78_00415 436d94b8bb1e20cb83edcb5129e4e538 442 Gene3D G3DSA:3.30.450.20 84 207 2.5E-6 T 13-10-2018 BEN78_00415 436d94b8bb1e20cb83edcb5129e4e538 442 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 318 426 5.4E-22 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_00415 436d94b8bb1e20cb83edcb5129e4e538 442 Pfam PF00512 His Kinase A (phospho-acceptor) domain 209 272 2.5E-20 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_00415 436d94b8bb1e20cb83edcb5129e4e538 442 Gene3D G3DSA:1.10.287.130 208 273 1.2E-24 T 13-10-2018 BEN78_00415 436d94b8bb1e20cb83edcb5129e4e538 442 SMART SM00388 209 273 3.4E-23 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_00415 436d94b8bb1e20cb83edcb5129e4e538 442 SUPERFAMILY SSF47384 193 273 1.73E-20 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN78_00415 436d94b8bb1e20cb83edcb5129e4e538 442 SMART SM00387 316 429 6.7E-31 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_00415 436d94b8bb1e20cb83edcb5129e4e538 442 SUPERFAMILY SSF55874 262 425 1.15E-36 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_00415 436d94b8bb1e20cb83edcb5129e4e538 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 8.8E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_00415 436d94b8bb1e20cb83edcb5129e4e538 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 8.8E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_00415 436d94b8bb1e20cb83edcb5129e4e538 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 8.8E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_00415 436d94b8bb1e20cb83edcb5129e4e538 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 8.8E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_00415 436d94b8bb1e20cb83edcb5129e4e538 442 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 97 425 3.7E-124 T 13-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 BEN78_02885 a3727750a7bdc83c7bf30e1af6424587 619 SUPERFAMILY SSF52540 298 516 2.78E-41 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_02885 a3727750a7bdc83c7bf30e1af6424587 619 Pfam PF00005 ABC transporter 17 178 9.1E-20 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_02885 a3727750a7bdc83c7bf30e1af6424587 619 Pfam PF16326 ABC transporter C-terminal domain 558 616 1.6E-8 T 13-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 BEN78_02885 a3727750a7bdc83c7bf30e1af6424587 619 SUPERFAMILY SSF52540 2 240 5.09E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_02885 a3727750a7bdc83c7bf30e1af6424587 619 Gene3D G3DSA:3.40.50.300 1 259 2.7E-55 T 13-10-2018 BEN78_02885 a3727750a7bdc83c7bf30e1af6424587 619 Gene3D G3DSA:3.40.50.300 275 535 2.5E-45 T 13-10-2018 BEN78_02885 a3727750a7bdc83c7bf30e1af6424587 619 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN78_02885 a3727750a7bdc83c7bf30e1af6424587 619 ProSitePatterns PS00211 ABC transporters family signature. 435 449 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN78_02885 a3727750a7bdc83c7bf30e1af6424587 619 Pfam PF12848 ABC transporter 217 297 2.6E-23 T 13-10-2018 IPR032781 ABC-transporter extension domain BEN78_02885 a3727750a7bdc83c7bf30e1af6424587 619 Pfam PF00005 ABC transporter 332 463 1.0E-19 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_02885 a3727750a7bdc83c7bf30e1af6424587 619 SMART SM00382 341 508 4.9E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_02885 a3727750a7bdc83c7bf30e1af6424587 619 SMART SM00382 26 222 0.083 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_15455 4fc12121b7687c8be57e0d308451829e 157 TIGRFAM TIGR01848 PHA_reg_PhaR: polyhydroxyalkanoate synthesis repressor PhaR 5 111 2.3E-53 T 13-10-2018 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR GO:0006355 BEN78_15455 4fc12121b7687c8be57e0d308451829e 157 Pfam PF05233 PHB accumulation regulatory domain 70 109 3.4E-19 T 13-10-2018 IPR007897 PHB accumulation regulatory BEN78_15455 4fc12121b7687c8be57e0d308451829e 157 Pfam PF07879 PHB/PHA accumulation regulator DNA-binding domain 6 65 5.0E-30 T 13-10-2018 IPR012909 PHA accumulation regulator DNA-binding, N-terminal BEN78_15965 0c07e9cccbf0137089cc53c92b9b7b64 348 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 135 314 6.2E-47 T 13-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 BEN78_15965 0c07e9cccbf0137089cc53c92b9b7b64 348 SUPERFAMILY SSF56059 135 329 2.23E-37 T 13-10-2018 BEN78_15965 0c07e9cccbf0137089cc53c92b9b7b64 348 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 1 130 1.0E-10 T 13-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 BEN78_15965 0c07e9cccbf0137089cc53c92b9b7b64 348 Gene3D G3DSA:3.30.470.20 126 312 2.7E-74 T 13-10-2018 BEN78_15965 0c07e9cccbf0137089cc53c92b9b7b64 348 Gene3D G3DSA:3.30.1490.20 149 213 2.7E-74 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BEN78_15965 0c07e9cccbf0137089cc53c92b9b7b64 348 Hamap MF_00162 Glutathione synthetase [gshB]. 1 333 78.382 T 13-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 BEN78_15965 0c07e9cccbf0137089cc53c92b9b7b64 348 SUPERFAMILY SSF52440 1 132 8.92E-14 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BEN78_15965 0c07e9cccbf0137089cc53c92b9b7b64 348 Gene3D G3DSA:3.40.50.20 14 125 2.7E-74 T 13-10-2018 BEN78_02475 069fa0b5ee373b90c480e24729b562ee 241 SUPERFAMILY SSF56529 25 236 1.27E-60 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 BEN78_02475 069fa0b5ee373b90c480e24729b562ee 241 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 30 236 2.0E-50 T 13-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 BEN78_02475 069fa0b5ee373b90c480e24729b562ee 241 Gene3D G3DSA:3.90.850.10 9 240 1.1E-71 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 BEN78_00590 ee31257f6302e0f732bdb457e6dbb24c 226 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 2.9E-69 T 13-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 BEN78_00590 ee31257f6302e0f732bdb457e6dbb24c 226 Pfam PF02224 Cytidylate kinase 9 220 1.4E-69 T 13-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 BEN78_00590 ee31257f6302e0f732bdb457e6dbb24c 226 SUPERFAMILY SSF52540 7 224 3.58E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_00590 ee31257f6302e0f732bdb457e6dbb24c 226 Gene3D G3DSA:3.40.50.300 1 225 1.3E-77 T 13-10-2018 BEN78_00590 ee31257f6302e0f732bdb457e6dbb24c 226 Hamap MF_00238 Cytidylate kinase [cmk]. 6 225 33.158 T 13-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 BEN78_04975 ab04749553cf96a82ff33168974faf78 425 Gene3D G3DSA:3.40.50.720 2 198 1.6E-58 T 13-10-2018 BEN78_04975 ab04749553cf96a82ff33168974faf78 425 Gene3D G3DSA:3.40.50.720 202 424 3.5E-55 T 13-10-2018 BEN78_04975 ab04749553cf96a82ff33168974faf78 425 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 203 291 2.0E-23 T 13-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BEN78_04975 ab04749553cf96a82ff33168974faf78 425 PIRSF PIRSF500136 2 425 2.2E-149 T 13-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 BEN78_04975 ab04749553cf96a82ff33168974faf78 425 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 318 416 3.8E-20 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BEN78_04975 ab04749553cf96a82ff33168974faf78 425 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 8 413 1.8E-117 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 BEN78_04975 ab04749553cf96a82ff33168974faf78 425 PIRSF PIRSF000124 7 423 1.8E-51 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 BEN78_04975 ab04749553cf96a82ff33168974faf78 425 SUPERFAMILY SSF52413 303 420 9.55E-28 T 13-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 BEN78_04975 ab04749553cf96a82ff33168974faf78 425 SMART SM00984 318 418 8.8E-31 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BEN78_04975 ab04749553cf96a82ff33168974faf78 425 SUPERFAMILY SSF48179 202 293 1.0E-23 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BEN78_04975 ab04749553cf96a82ff33168974faf78 425 SUPERFAMILY SSF51735 8 192 6.73E-46 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_04975 ab04749553cf96a82ff33168974faf78 425 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 8 181 1.0E-33 T 13-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BEN78_11870 769a3420d50d1d99264c2e2a0354ec95 460 SMART SM00490 259 340 2.5E-32 T 13-10-2018 IPR001650 Helicase, C-terminal BEN78_11870 769a3420d50d1d99264c2e2a0354ec95 460 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BEN78_11870 769a3420d50d1d99264c2e2a0354ec95 460 SUPERFAMILY SSF52540 75 359 1.0E-74 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_11870 769a3420d50d1d99264c2e2a0354ec95 460 Gene3D G3DSA:3.40.50.300 1 212 6.7E-81 T 13-10-2018 BEN78_11870 769a3420d50d1d99264c2e2a0354ec95 460 Pfam PF00271 Helicase conserved C-terminal domain 232 340 3.1E-26 T 13-10-2018 IPR001650 Helicase, C-terminal BEN78_11870 769a3420d50d1d99264c2e2a0354ec95 460 Pfam PF00270 DEAD/DEAH box helicase 26 195 8.3E-52 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BEN78_11870 769a3420d50d1d99264c2e2a0354ec95 460 SMART SM00487 21 223 1.5E-59 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN78_11870 769a3420d50d1d99264c2e2a0354ec95 460 Gene3D G3DSA:3.40.50.300 214 377 1.8E-49 T 13-10-2018 BEN78_04195 60b3b5607a7ad79f2e6fd56bf17b417f 350 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 29 303 1.6E-84 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 BEN78_04195 60b3b5607a7ad79f2e6fd56bf17b417f 350 Gene3D G3DSA:1.20.1510.10 29 224 7.8E-45 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily BEN78_04195 60b3b5607a7ad79f2e6fd56bf17b417f 350 SUPERFAMILY SSF161111 30 225 4.05E-57 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily BEN78_04195 60b3b5607a7ad79f2e6fd56bf17b417f 350 SUPERFAMILY SSF160240 228 301 5.23E-7 T 13-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 BEN78_04195 60b3b5607a7ad79f2e6fd56bf17b417f 350 Pfam PF01545 Cation efflux family 35 224 2.4E-46 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 BEN78_13985 e9a77e77e21006b61feef8cdea534178 395 SUPERFAMILY SSF111369 68 286 2.35E-41 T 13-10-2018 BEN78_13985 e9a77e77e21006b61feef8cdea534178 395 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 81 280 1.4E-33 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BEN78_13985 e9a77e77e21006b61feef8cdea534178 395 Gene3D G3DSA:2.40.420.20 291 375 3.5E-72 T 13-10-2018 BEN78_13985 e9a77e77e21006b61feef8cdea534178 395 Gene3D G3DSA:2.40.30.170 68 290 3.5E-72 T 13-10-2018 BEN78_13985 e9a77e77e21006b61feef8cdea534178 395 Gene3D G3DSA:2.40.50.100 79 207 3.5E-72 T 13-10-2018 BEN78_13985 e9a77e77e21006b61feef8cdea534178 395 Gene3D G3DSA:1.10.287.470 114 173 3.5E-72 T 13-10-2018 BEN78_13985 e9a77e77e21006b61feef8cdea534178 395 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 56 378 2.3E-71 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BEN78_10860 7387922d3940c8046503d0a89761e38c 191 Gene3D G3DSA:2.60.450.10 22 159 2.2E-28 T 13-10-2018 BEN78_10860 7387922d3940c8046503d0a89761e38c 191 Pfam PF03968 OstA-like protein 48 144 1.1E-16 T 13-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal BEN78_10860 7387922d3940c8046503d0a89761e38c 191 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 22 162 4.2E-29 T 13-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 BEN78_11460 7ec359cf5465d0b89f7c78876aff503c 178 Gene3D G3DSA:3.30.160.70 6 75 1.9E-18 T 13-10-2018 BEN78_11460 7ec359cf5465d0b89f7c78876aff503c 178 SUPERFAMILY SSF53155 7 84 1.57E-18 T 13-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 BEN78_11460 7ec359cf5465d0b89f7c78876aff503c 178 Gene3D G3DSA:1.10.10.10 77 161 8.6E-35 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_11460 7ec359cf5465d0b89f7c78876aff503c 178 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 81 160 1.5E-32 T 13-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 BEN78_11460 7ec359cf5465d0b89f7c78876aff503c 178 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 10 160 41.409 T 13-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 BEN78_11460 7ec359cf5465d0b89f7c78876aff503c 178 SUPERFAMILY SSF46767 79 160 1.83E-31 T 13-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 BEN78_11460 7ec359cf5465d0b89f7c78876aff503c 178 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 7 76 2.2E-4 T 13-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 BEN78_11460 7ec359cf5465d0b89f7c78876aff503c 178 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 80 159 1.9E-34 T 13-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 BEN78_11460 7ec359cf5465d0b89f7c78876aff503c 178 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 130 136 - T 13-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 BEN78_06660 3af54360fc64b80881cbc20d291a2c79 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 156 184 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BEN78_06660 3af54360fc64b80881cbc20d291a2c79 250 SUPERFAMILY SSF51735 6 246 1.1E-60 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_06660 3af54360fc64b80881cbc20d291a2c79 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 188 2.9E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06660 3af54360fc64b80881cbc20d291a2c79 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.9E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06660 3af54360fc64b80881cbc20d291a2c79 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 2.9E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06660 3af54360fc64b80881cbc20d291a2c79 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.9E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06660 3af54360fc64b80881cbc20d291a2c79 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 190 207 2.9E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06660 3af54360fc64b80881cbc20d291a2c79 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 169 188 8.2E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06660 3af54360fc64b80881cbc20d291a2c79 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 8.2E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06660 3af54360fc64b80881cbc20d291a2c79 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 8.2E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06660 3af54360fc64b80881cbc20d291a2c79 250 Pfam PF00106 short chain dehydrogenase 8 213 5.0E-49 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06660 3af54360fc64b80881cbc20d291a2c79 250 Gene3D G3DSA:3.40.50.720 2 249 2.6E-73 T 13-10-2018 BEN78_00705 dfc729ceb960a09070f661dd24dbd6c8 211 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN78_00705 dfc729ceb960a09070f661dd24dbd6c8 211 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 9 201 1.0E-65 T 13-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 BEN78_00705 dfc729ceb960a09070f661dd24dbd6c8 211 SUPERFAMILY SSF52540 7 208 3.26E-40 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_00705 dfc729ceb960a09070f661dd24dbd6c8 211 Pfam PF00005 ABC transporter 27 162 2.7E-23 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_00705 dfc729ceb960a09070f661dd24dbd6c8 211 Gene3D G3DSA:3.40.50.300 6 209 6.2E-40 T 13-10-2018 BEN78_00705 dfc729ceb960a09070f661dd24dbd6c8 211 SMART SM00382 33 211 3.7E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_00215 f95be4712f445fa4f6f52b8b3733afcb 766 SUPERFAMILY SSF56935 113 764 7.33E-83 T 13-10-2018 BEN78_00215 f95be4712f445fa4f6f52b8b3733afcb 766 Gene3D G3DSA:3.55.50.30 18 129 2.6E-18 T 13-10-2018 BEN78_00215 f95be4712f445fa4f6f52b8b3733afcb 766 Gene3D G3DSA:2.40.170.20 130 766 7.1E-100 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_00215 f95be4712f445fa4f6f52b8b3733afcb 766 Pfam PF00593 TonB dependent receptor 340 746 6.7E-34 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_00215 f95be4712f445fa4f6f52b8b3733afcb 766 Pfam PF07715 TonB-dependent Receptor Plug Domain 138 242 1.7E-14 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_00215 f95be4712f445fa4f6f52b8b3733afcb 766 SMART SM00965 46 97 2.1E-5 T 13-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 BEN78_02390 7e9eb6b9742b7592c5c9e95a1f1602c8 385 Gene3D G3DSA:3.40.50.10490 6 202 3.2E-51 T 13-10-2018 BEN78_02390 7e9eb6b9742b7592c5c9e95a1f1602c8 385 Gene3D G3DSA:3.40.50.10490 203 378 3.9E-56 T 13-10-2018 BEN78_02390 7e9eb6b9742b7592c5c9e95a1f1602c8 385 Pfam PF01380 SIS domain 61 191 2.9E-15 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BEN78_02390 7e9eb6b9742b7592c5c9e95a1f1602c8 385 SUPERFAMILY SSF53697 21 375 1.34E-48 T 13-10-2018 BEN78_12365 075accf4c7c5157a1c54ac3614b73b86 504 PIRSF PIRSF002869 1 503 2.7E-146 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BEN78_12365 075accf4c7c5157a1c54ac3614b73b86 504 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 1 462 18.506 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BEN78_12365 075accf4c7c5157a1c54ac3614b73b86 504 Pfam PF03023 MviN-like protein 17 464 3.4E-127 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BEN78_12365 075accf4c7c5157a1c54ac3614b73b86 504 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 1 495 1.7E-128 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BEN78_12365 075accf4c7c5157a1c54ac3614b73b86 504 PRINTS PR01806 Virulence factor MviN signature 21 40 1.8E-70 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BEN78_12365 075accf4c7c5157a1c54ac3614b73b86 504 PRINTS PR01806 Virulence factor MviN signature 404 421 1.8E-70 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BEN78_12365 075accf4c7c5157a1c54ac3614b73b86 504 PRINTS PR01806 Virulence factor MviN signature 345 364 1.8E-70 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BEN78_12365 075accf4c7c5157a1c54ac3614b73b86 504 PRINTS PR01806 Virulence factor MviN signature 40 56 1.8E-70 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BEN78_12365 075accf4c7c5157a1c54ac3614b73b86 504 PRINTS PR01806 Virulence factor MviN signature 145 166 1.8E-70 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BEN78_12365 075accf4c7c5157a1c54ac3614b73b86 504 PRINTS PR01806 Virulence factor MviN signature 247 273 1.8E-70 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BEN78_12365 075accf4c7c5157a1c54ac3614b73b86 504 PRINTS PR01806 Virulence factor MviN signature 121 145 1.8E-70 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BEN78_16030 285e38679564f4cf8109c3c814df23ab 266 SUPERFAMILY SSF51735 17 259 1.95E-71 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_16030 285e38679564f4cf8109c3c814df23ab 266 Gene3D G3DSA:3.40.50.720 9 265 1.1E-70 T 13-10-2018 BEN78_16030 285e38679564f4cf8109c3c814df23ab 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 1.1E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_16030 285e38679564f4cf8109c3c814df23ab 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 1.1E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_16030 285e38679564f4cf8109c3c814df23ab 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 1.1E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_16030 285e38679564f4cf8109c3c814df23ab 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 19 36 1.1E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_16030 285e38679564f4cf8109c3c814df23ab 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 1.1E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_16030 285e38679564f4cf8109c3c814df23ab 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 1.1E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_16030 285e38679564f4cf8109c3c814df23ab 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 5.6E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_16030 285e38679564f4cf8109c3c814df23ab 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 5.6E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_16030 285e38679564f4cf8109c3c814df23ab 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 5.6E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_16030 285e38679564f4cf8109c3c814df23ab 266 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BEN78_16030 285e38679564f4cf8109c3c814df23ab 266 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 24 259 4.4E-64 T 13-10-2018 BEN78_13780 cd2496ad0ed252a1b84893d6d9948b9b 520 Gene3D G3DSA:3.30.870.10 305 470 4.9E-36 T 13-10-2018 BEN78_13780 cd2496ad0ed252a1b84893d6d9948b9b 520 SMART SM00155 174 201 0.0066 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BEN78_13780 cd2496ad0ed252a1b84893d6d9948b9b 520 SMART SM00155 410 437 8.0E-5 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BEN78_13780 cd2496ad0ed252a1b84893d6d9948b9b 520 SUPERFAMILY SSF56024 55 250 2.92E-40 T 13-10-2018 BEN78_13780 cd2496ad0ed252a1b84893d6d9948b9b 520 Pfam PF13091 PLD-like domain 321 461 3.4E-20 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BEN78_13780 cd2496ad0ed252a1b84893d6d9948b9b 520 Pfam PF13091 PLD-like domain 86 233 1.3E-12 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BEN78_13780 cd2496ad0ed252a1b84893d6d9948b9b 520 SUPERFAMILY SSF56024 285 469 1.7E-33 T 13-10-2018 BEN78_13780 cd2496ad0ed252a1b84893d6d9948b9b 520 Gene3D G3DSA:3.30.870.10 64 255 4.6E-37 T 13-10-2018 BEN78_16250 c9203afbfc8a0e9d19a774e0d1d1d43a 326 PIRSF PIRSF029038 6 326 7.6E-133 T 13-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 BEN78_16250 c9203afbfc8a0e9d19a774e0d1d1d43a 326 SUPERFAMILY SSF53335 54 314 3.22E-21 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_16250 c9203afbfc8a0e9d19a774e0d1d1d43a 326 Gene3D G3DSA:3.40.50.150 49 314 7.1E-77 T 13-10-2018 BEN78_16250 c9203afbfc8a0e9d19a774e0d1d1d43a 326 Pfam PF05971 Protein of unknown function (DUF890) 14 314 7.9E-124 T 13-10-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 BEN78_16250 c9203afbfc8a0e9d19a774e0d1d1d43a 326 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 15 316 50.899 T 13-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 BEN78_04875 7bfe96591210d9c4d51ac338f12ff681 72 Pfam PF11137 Protein of unknown function (DUF2909) 8 65 1.3E-21 T 13-10-2018 IPR021313 Protein of unknown function DUF2909 BEN78_08545 83ebc31c63f8105426fda23a0c5cd225 198 Gene3D G3DSA:3.30.160.670 22 190 4.4E-35 T 13-10-2018 BEN78_08545 83ebc31c63f8105426fda23a0c5cd225 198 Pfam PF13590 Domain of unknown function (DUF4136) 32 188 7.7E-30 T 13-10-2018 IPR025411 Domain of unknown function DUF4136 BEN78_08550 b6e3031ff4b765de6e9babfffa737453 778 Gene3D G3DSA:2.120.10.30 280 482 1.7E-36 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BEN78_08550 b6e3031ff4b765de6e9babfffa737453 778 SMART SM00862 36 115 8.2E-13 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN78_08550 b6e3031ff4b765de6e9babfffa737453 778 SUPERFAMILY SSF82171 214 296 2.67E-5 T 13-10-2018 BEN78_08550 b6e3031ff4b765de6e9babfffa737453 778 Gene3D G3DSA:1.10.10.10 11 123 7.0E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_08550 b6e3031ff4b765de6e9babfffa737453 778 SUPERFAMILY SSF82171 281 650 2.22E-40 T 13-10-2018 BEN78_08550 b6e3031ff4b765de6e9babfffa737453 778 Pfam PF00486 Transcriptional regulatory protein, C terminal 38 115 1.2E-13 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN78_08550 b6e3031ff4b765de6e9babfffa737453 778 Gene3D G3DSA:2.120.10.60 483 625 6.5E-6 T 13-10-2018 BEN78_08550 b6e3031ff4b765de6e9babfffa737453 778 SUPERFAMILY SSF46894 15 117 1.25E-13 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BEN78_08550 b6e3031ff4b765de6e9babfffa737453 778 Pfam PF07676 WD40-like Beta Propeller Repeat 373 395 8.8E-5 T 13-10-2018 IPR011659 WD40-like Beta Propeller BEN78_08550 b6e3031ff4b765de6e9babfffa737453 778 Pfam PF07676 WD40-like Beta Propeller Repeat 495 528 8.1E-9 T 13-10-2018 IPR011659 WD40-like Beta Propeller BEN78_08550 b6e3031ff4b765de6e9babfffa737453 778 Pfam PF07676 WD40-like Beta Propeller Repeat 266 294 7.2E-5 T 13-10-2018 IPR011659 WD40-like Beta Propeller BEN78_08550 b6e3031ff4b765de6e9babfffa737453 778 Pfam PF07676 WD40-like Beta Propeller Repeat 218 243 0.014 T 13-10-2018 IPR011659 WD40-like Beta Propeller BEN78_07025 ab2e813eb8dd9711a445fb3c0d61c3f7 382 Pfam PF00248 Aldo/keto reductase family 62 369 2.1E-46 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain BEN78_07025 ab2e813eb8dd9711a445fb3c0d61c3f7 382 Gene3D G3DSA:3.20.20.100 53 380 5.3E-62 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BEN78_07025 ab2e813eb8dd9711a445fb3c0d61c3f7 382 SUPERFAMILY SSF51430 61 369 3.01E-58 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BEN78_11495 334a27465ec5719cb5c156d4e83a51cf 154 Pfam PF01641 SelR domain 18 134 4.2E-46 T 13-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 BEN78_11495 334a27465ec5719cb5c156d4e83a51cf 154 SUPERFAMILY SSF51316 17 136 8.72E-51 T 13-10-2018 IPR011057 Mss4-like superfamily BEN78_11495 334a27465ec5719cb5c156d4e83a51cf 154 Gene3D G3DSA:2.170.150.20 10 154 6.6E-57 T 13-10-2018 BEN78_11495 334a27465ec5719cb5c156d4e83a51cf 154 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 18 135 3.3E-43 T 13-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 BEN78_10565 a0ab69177becd134b68c2739a6dbfb31 235 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 11 226 1.0E-86 T 13-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN78_10565 a0ab69177becd134b68c2739a6dbfb31 235 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 4 228 41.992 T 13-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN78_10565 a0ab69177becd134b68c2739a6dbfb31 235 SUPERFAMILY SSF53955 57 226 2.14E-57 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily BEN78_10565 a0ab69177becd134b68c2739a6dbfb31 235 Gene3D G3DSA:1.10.3810.10 56 230 7.4E-50 T 13-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN78_10565 a0ab69177becd134b68c2739a6dbfb31 235 Pfam PF00912 Transglycosylase 60 218 1.9E-48 T 13-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN78_11115 859f6e16da75747a365abbc225c2be0e 245 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 2.4E-39 T 13-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11115 859f6e16da75747a365abbc225c2be0e 245 Gene3D G3DSA:3.30.300.20 17 107 1.8E-30 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta BEN78_11115 859f6e16da75747a365abbc225c2be0e 245 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 2.6E-95 T 13-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 BEN78_11115 859f6e16da75747a365abbc225c2be0e 245 SUPERFAMILY SSF54821 108 206 1.15E-39 T 13-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11115 859f6e16da75747a365abbc225c2be0e 245 Pfam PF07650 KH domain 38 111 1.8E-19 T 13-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11115 859f6e16da75747a365abbc225c2be0e 245 SMART SM00322 60 125 2.1E-10 T 13-10-2018 IPR004087 K Homology domain GO:0003676 BEN78_11115 859f6e16da75747a365abbc225c2be0e 245 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.093 T 13-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 BEN78_11115 859f6e16da75747a365abbc225c2be0e 245 SUPERFAMILY SSF54814 2 106 1.23E-38 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 BEN78_11115 859f6e16da75747a365abbc225c2be0e 245 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 13-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11115 859f6e16da75747a365abbc225c2be0e 245 Gene3D G3DSA:3.30.1140.32 108 208 2.2E-43 T 13-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_13835 d26fe01c6f81139ebc5672822eee589b 598 Gene3D G3DSA:2.40.30.10 187 285 9.6E-32 T 13-10-2018 BEN78_13835 d26fe01c6f81139ebc5672822eee589b 598 Pfam PF00009 Elongation factor Tu GTP binding domain 3 181 6.8E-53 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN78_13835 d26fe01c6f81139ebc5672822eee589b 598 Pfam PF00679 Elongation factor G C-terminus 399 479 2.2E-18 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like BEN78_13835 d26fe01c6f81139ebc5672822eee589b 598 SUPERFAMILY SSF52540 2 203 2.53E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_13835 d26fe01c6f81139ebc5672822eee589b 598 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 175 5.1E-17 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BEN78_13835 d26fe01c6f81139ebc5672822eee589b 598 Gene3D G3DSA:3.30.70.2570 480 553 3.3E-32 T 13-10-2018 IPR038363 LepA, C-terminal domain superfamily BEN78_13835 d26fe01c6f81139ebc5672822eee589b 598 SMART SM00838 398 486 0.0024 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like BEN78_13835 d26fe01c6f81139ebc5672822eee589b 598 Gene3D G3DSA:3.40.50.300 1 185 1.5E-71 T 13-10-2018 BEN78_13835 d26fe01c6f81139ebc5672822eee589b 598 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site BEN78_13835 d26fe01c6f81139ebc5672822eee589b 598 Pfam PF06421 GTP-binding protein LepA C-terminus 487 593 4.2E-51 T 13-10-2018 IPR013842 GTP-binding protein LepA, C-terminal BEN78_13835 d26fe01c6f81139ebc5672822eee589b 598 SUPERFAMILY SSF50447 165 288 6.63E-30 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BEN78_13835 d26fe01c6f81139ebc5672822eee589b 598 Gene3D G3DSA:3.30.70.3380 368 478 9.7E-39 T 13-10-2018 BEN78_13835 d26fe01c6f81139ebc5672822eee589b 598 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 298.096 T 13-10-2018 IPR006297 Elongation factor 4 GO:0005525 BEN78_13835 d26fe01c6f81139ebc5672822eee589b 598 SUPERFAMILY SSF54980 292 370 1.37E-18 T 13-10-2018 IPR035647 EF-G domain III/V-like BEN78_13835 d26fe01c6f81139ebc5672822eee589b 598 PRINTS PR00315 GTP-binding elongation factor signature 90 101 3.0E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN78_13835 d26fe01c6f81139ebc5672822eee589b 598 PRINTS PR00315 GTP-binding elongation factor signature 126 135 3.0E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN78_13835 d26fe01c6f81139ebc5672822eee589b 598 PRINTS PR00315 GTP-binding elongation factor signature 74 84 3.0E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN78_13835 d26fe01c6f81139ebc5672822eee589b 598 PRINTS PR00315 GTP-binding elongation factor signature 6 19 3.0E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN78_13835 d26fe01c6f81139ebc5672822eee589b 598 PRINTS PR00315 GTP-binding elongation factor signature 49 57 3.0E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN78_13835 d26fe01c6f81139ebc5672822eee589b 598 Pfam PF03144 Elongation factor Tu domain 2 205 275 8.1E-11 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 BEN78_13835 d26fe01c6f81139ebc5672822eee589b 598 TIGRFAM TIGR01393 lepA: elongation factor 4 3 593 8.8E-293 T 13-10-2018 IPR006297 Elongation factor 4 GO:0005525 BEN78_13835 d26fe01c6f81139ebc5672822eee589b 598 Gene3D G3DSA:3.30.70.870 286 367 5.4E-36 T 13-10-2018 BEN78_13835 d26fe01c6f81139ebc5672822eee589b 598 SUPERFAMILY SSF54980 399 493 3.12E-23 T 13-10-2018 IPR035647 EF-G domain III/V-like BEN78_00335 decca311ec8d12fb26516beccfd0e601 208 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 119 132 - T 13-10-2018 IPR033135 ClpP, histidine active site BEN78_00335 decca311ec8d12fb26516beccfd0e601 208 Pfam PF00574 Clp protease 19 199 3.6E-88 T 13-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA BEN78_00335 decca311ec8d12fb26516beccfd0e601 208 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 9 199 2.7E-107 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BEN78_00335 decca311ec8d12fb26516beccfd0e601 208 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 97 108 - T 13-10-2018 IPR018215 ClpP, Ser active site BEN78_00335 decca311ec8d12fb26516beccfd0e601 208 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 10 200 44.622 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BEN78_00335 decca311ec8d12fb26516beccfd0e601 208 PRINTS PR00127 Clp protease catalytic subunit P signature 66 86 1.5E-52 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BEN78_00335 decca311ec8d12fb26516beccfd0e601 208 PRINTS PR00127 Clp protease catalytic subunit P signature 97 114 1.5E-52 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BEN78_00335 decca311ec8d12fb26516beccfd0e601 208 PRINTS PR00127 Clp protease catalytic subunit P signature 26 41 1.5E-52 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BEN78_00335 decca311ec8d12fb26516beccfd0e601 208 PRINTS PR00127 Clp protease catalytic subunit P signature 118 137 1.5E-52 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BEN78_00335 decca311ec8d12fb26516beccfd0e601 208 PRINTS PR00127 Clp protease catalytic subunit P signature 175 194 1.5E-52 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BEN78_00335 decca311ec8d12fb26516beccfd0e601 208 Gene3D G3DSA:3.90.226.10 1 204 8.1E-84 T 13-10-2018 BEN78_00335 decca311ec8d12fb26516beccfd0e601 208 SUPERFAMILY SSF52096 17 200 4.21E-74 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BEN78_00510 cb77c574540beecb05241590bc6f294a 260 Pfam PF00557 Metallopeptidase family M24 12 242 1.4E-55 T 13-10-2018 IPR000994 Peptidase M24 BEN78_00510 cb77c574540beecb05241590bc6f294a 260 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 250 1.6E-100 T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 BEN78_00510 cb77c574540beecb05241590bc6f294a 260 Gene3D G3DSA:3.90.230.10 2 258 4.9E-113 T 13-10-2018 BEN78_00510 cb77c574540beecb05241590bc6f294a 260 Hamap MF_01974 Methionine aminopeptidase [map]. 3 251 42.876 T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 BEN78_00510 cb77c574540beecb05241590bc6f294a 260 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 168 186 - T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 BEN78_00510 cb77c574540beecb05241590bc6f294a 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 92 108 3.1E-22 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BEN78_00510 cb77c574540beecb05241590bc6f294a 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 3.1E-22 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BEN78_00510 cb77c574540beecb05241590bc6f294a 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 162 174 3.1E-22 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BEN78_00510 cb77c574540beecb05241590bc6f294a 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 3.1E-22 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BEN78_00510 cb77c574540beecb05241590bc6f294a 260 SUPERFAMILY SSF55920 5 253 1.7E-96 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like BEN78_04570 36b099d29653d90dab1f0a73c0dd0464 388 Gene3D G3DSA:2.40.160.10 26 388 1.3E-76 T 13-10-2018 IPR023614 Porin domain superfamily BEN78_04570 36b099d29653d90dab1f0a73c0dd0464 388 Pfam PF07396 Phosphate-selective porin O and P 38 388 5.2E-78 T 13-10-2018 IPR010870 Phosphate-selective porin O/P BEN78_04570 36b099d29653d90dab1f0a73c0dd0464 388 SUPERFAMILY SSF56935 91 387 4.19E-13 T 13-10-2018 BEN78_02635 1383aa7a0d3e17fd6216f1a943fb3ed9 662 SMART SM00861 357 528 1.6E-68 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BEN78_02635 1383aa7a0d3e17fd6216f1a943fb3ed9 662 ProSitePatterns PS00801 Transketolase signature 1. 14 34 - T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BEN78_02635 1383aa7a0d3e17fd6216f1a943fb3ed9 662 SUPERFAMILY SSF52518 6 330 1.26E-116 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold BEN78_02635 1383aa7a0d3e17fd6216f1a943fb3ed9 662 Gene3D G3DSA:3.40.50.970 329 540 5.9E-75 T 13-10-2018 BEN78_02635 1383aa7a0d3e17fd6216f1a943fb3ed9 662 Pfam PF02779 Transketolase, pyrimidine binding domain 357 528 7.1E-44 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BEN78_02635 1383aa7a0d3e17fd6216f1a943fb3ed9 662 Pfam PF02780 Transketolase, C-terminal domain 544 655 1.1E-12 T 13-10-2018 IPR033248 Transketolase, C-terminal domain BEN78_02635 1383aa7a0d3e17fd6216f1a943fb3ed9 662 TIGRFAM TIGR00232 tktlase_bact: transketolase 8 662 2.8E-283 T 13-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 BEN78_02635 1383aa7a0d3e17fd6216f1a943fb3ed9 662 ProSitePatterns PS00802 Transketolase signature 2. 470 486 - T 13-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BEN78_02635 1383aa7a0d3e17fd6216f1a943fb3ed9 662 Gene3D G3DSA:3.40.50.970 5 328 6.0E-127 T 13-10-2018 BEN78_02635 1383aa7a0d3e17fd6216f1a943fb3ed9 662 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 6 336 1.2E-154 T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BEN78_02635 1383aa7a0d3e17fd6216f1a943fb3ed9 662 SUPERFAMILY SSF52922 536 662 1.86E-40 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BEN78_02635 1383aa7a0d3e17fd6216f1a943fb3ed9 662 Gene3D G3DSA:3.40.50.920 542 662 9.1E-40 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BEN78_02635 1383aa7a0d3e17fd6216f1a943fb3ed9 662 SUPERFAMILY SSF52518 345 528 3.67E-64 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold BEN78_06165 767d376595f78f5b05a2830f695ec1cb 282 Pfam PF01564 Spermine/spermidine synthase domain 62 241 1.1E-51 T 13-10-2018 BEN78_06165 767d376595f78f5b05a2830f695ec1cb 282 Gene3D G3DSA:2.30.140.10 4 57 4.6E-17 T 13-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 BEN78_06165 767d376595f78f5b05a2830f695ec1cb 282 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 82 95 - T 13-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 BEN78_06165 767d376595f78f5b05a2830f695ec1cb 282 Gene3D G3DSA:3.40.50.150 58 282 5.6E-63 T 13-10-2018 BEN78_06165 767d376595f78f5b05a2830f695ec1cb 282 SUPERFAMILY SSF53335 5 281 1.09E-75 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_06165 767d376595f78f5b05a2830f695ec1cb 282 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 5 281 36.386 T 13-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 BEN78_06165 767d376595f78f5b05a2830f695ec1cb 282 TIGRFAM TIGR00417 speE: spermidine synthase 8 275 2.6E-82 T 13-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 BEN78_06165 767d376595f78f5b05a2830f695ec1cb 282 Pfam PF17284 Spermidine synthase tetramerisation domain 6 57 1.9E-10 T 13-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 BEN78_01025 cbdee757021fb0e4b671097c04e5a2f1 446 Gene3D G3DSA:1.20.59.20 232 314 1.6E-7 T 13-10-2018 BEN78_01025 cbdee757021fb0e4b671097c04e5a2f1 446 SUPERFAMILY SSF52402 15 221 5.24E-55 T 13-10-2018 BEN78_01025 cbdee757021fb0e4b671097c04e5a2f1 446 Gene3D G3DSA:3.40.50.620 14 229 2.9E-65 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_01025 cbdee757021fb0e4b671097c04e5a2f1 446 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 357 401 8.2E-17 T 13-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BEN78_01025 cbdee757021fb0e4b671097c04e5a2f1 446 Pfam PF09179 TilS substrate binding domain 246 312 3.9E-10 T 13-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BEN78_01025 cbdee757021fb0e4b671097c04e5a2f1 446 Pfam PF11734 TilS substrate C-terminal domain 357 430 6.3E-18 T 13-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BEN78_01025 cbdee757021fb0e4b671097c04e5a2f1 446 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 1 328 21.48 T 13-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BEN78_01025 cbdee757021fb0e4b671097c04e5a2f1 446 Pfam PF01171 PP-loop family 20 196 2.2E-53 T 13-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 BEN78_01025 cbdee757021fb0e4b671097c04e5a2f1 446 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 19 200 1.6E-48 T 13-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BEN78_01025 cbdee757021fb0e4b671097c04e5a2f1 446 SMART SM00977 356 430 3.7E-21 T 13-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BEN78_01025 cbdee757021fb0e4b671097c04e5a2f1 446 SUPERFAMILY SSF56037 323 431 6.02E-20 T 13-10-2018 BEN78_01025 cbdee757021fb0e4b671097c04e5a2f1 446 SUPERFAMILY SSF82829 242 314 7.19E-11 T 13-10-2018 BEN78_15505 7d93f34a88fe0b6ee85783cbe984d7c1 472 Pfam PF00817 impB/mucB/samB family 24 149 3.0E-6 T 13-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BEN78_15505 7d93f34a88fe0b6ee85783cbe984d7c1 472 SUPERFAMILY SSF56672 2 228 1.1E-32 T 13-10-2018 BEN78_02270 4e7d664961d5f83bbee9154bb0ce81f5 131 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 BEN78_02270 4e7d664961d5f83bbee9154bb0ce81f5 131 Pfam PF01597 Glycine cleavage H-protein 8 128 1.1E-43 T 13-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate BEN78_02270 4e7d664961d5f83bbee9154bb0ce81f5 131 SUPERFAMILY SSF51230 4 128 8.9E-45 T 13-10-2018 IPR011053 Single hybrid motif BEN78_02270 4e7d664961d5f83bbee9154bb0ce81f5 131 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 41.644 T 13-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 BEN78_02270 4e7d664961d5f83bbee9154bb0ce81f5 131 Gene3D G3DSA:2.40.50.100 2 129 1.8E-48 T 13-10-2018 BEN78_02270 4e7d664961d5f83bbee9154bb0ce81f5 131 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 129 2.6E-48 T 13-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 BEN78_05715 1e815ad65ce1a1390fcd613824938518 153 ProSitePatterns PS00550 Hemerythrin family signature. 57 80 - T 13-10-2018 IPR016131 Haemerythrin, iron-binding site GO:0046872 BEN78_05715 1e815ad65ce1a1390fcd613824938518 153 Gene3D G3DSA:1.20.120.50 1 131 1.4E-36 T 13-10-2018 IPR035938 Hemerythrin-like superfamily BEN78_05715 1e815ad65ce1a1390fcd613824938518 153 Pfam PF01814 Hemerythrin HHE cation binding domain 13 126 1.1E-14 T 13-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 BEN78_05715 1e815ad65ce1a1390fcd613824938518 153 Hamap MF_00556 Bacteriohemerythrin. 3 125 22.668 T 13-10-2018 IPR023504 Bacteriohemerythrin-like protein BEN78_05715 1e815ad65ce1a1390fcd613824938518 153 SUPERFAMILY SSF47188 1 125 2.49E-32 T 13-10-2018 IPR035938 Hemerythrin-like superfamily BEN78_05715 1e815ad65ce1a1390fcd613824938518 153 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 6 125 1.1E-34 T 13-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 BEN78_06195 58f53e762451b3dc04df2f04eaf60c72 503 Gene3D G3DSA:3.40.50.300 187 494 8.1E-57 T 13-10-2018 BEN78_06195 58f53e762451b3dc04df2f04eaf60c72 503 SUPERFAMILY SSF54211 2 168 6.83E-32 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BEN78_06195 58f53e762451b3dc04df2f04eaf60c72 503 Gene3D G3DSA:3.30.230.10 31 168 9.6E-7 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BEN78_06195 58f53e762451b3dc04df2f04eaf60c72 503 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 1.2E-42 T 13-10-2018 BEN78_06195 58f53e762451b3dc04df2f04eaf60c72 503 SUPERFAMILY SSF52540 186 493 3.87E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_06195 58f53e762451b3dc04df2f04eaf60c72 503 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 493 2.1E-29 T 13-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain BEN78_06195 58f53e762451b3dc04df2f04eaf60c72 503 SMART SM00382 208 390 2.3E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_06195 58f53e762451b3dc04df2f04eaf60c72 503 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 493 7.3E-186 T 13-10-2018 IPR004482 Mg chelatase-related protein BEN78_06195 58f53e762451b3dc04df2f04eaf60c72 503 Pfam PF01078 Magnesium chelatase, subunit ChlI 188 391 4.6E-97 T 13-10-2018 IPR000523 Magnesium chelatase ChlI domain BEN78_06195 58f53e762451b3dc04df2f04eaf60c72 503 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 287 301 1.3E-6 T 13-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 BEN78_06195 58f53e762451b3dc04df2f04eaf60c72 503 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 315 328 1.3E-6 T 13-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 BEN78_06195 58f53e762451b3dc04df2f04eaf60c72 503 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 339 351 1.3E-6 T 13-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 BEN78_06195 58f53e762451b3dc04df2f04eaf60c72 503 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 207 222 1.3E-6 T 13-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 BEN78_05245 2d8c76be997ee154930c3883a63903f8 113 Gene3D G3DSA:1.10.10.10 1 113 7.2E-32 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_05245 2d8c76be997ee154930c3883a63903f8 113 SUPERFAMILY SSF46785 14 104 4.08E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_05245 2d8c76be997ee154930c3883a63903f8 113 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 83 3.8E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_08710 6b0d939f4b6c4b3d8ed9ce2c980c5e1c 594 Hamap MF_01884 Transcription termination factor Rho [rho]. 177 594 228.231 T 13-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 BEN78_08710 6b0d939f4b6c4b3d8ed9ce2c980c5e1c 594 Gene3D G3DSA:1.10.720.10 178 223 4.6E-15 T 13-10-2018 BEN78_08710 6b0d939f4b6c4b3d8ed9ce2c980c5e1c 594 SUPERFAMILY SSF68912 178 222 1.53E-8 T 13-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily BEN78_08710 6b0d939f4b6c4b3d8ed9ce2c980c5e1c 594 SMART SM00382 346 513 6.2E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_08710 6b0d939f4b6c4b3d8ed9ce2c980c5e1c 594 Gene3D G3DSA:2.40.50.140 224 299 8.6E-31 T 13-10-2018 BEN78_08710 6b0d939f4b6c4b3d8ed9ce2c980c5e1c 594 SMART SM00959 181 223 1.0E-13 T 13-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 BEN78_08710 6b0d939f4b6c4b3d8ed9ce2c980c5e1c 594 SMART SM00357 228 294 2.0E-16 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 BEN78_08710 6b0d939f4b6c4b3d8ed9ce2c980c5e1c 594 TIGRFAM TIGR00767 rho: transcription termination factor Rho 178 593 6.2E-207 T 13-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 BEN78_08710 6b0d939f4b6c4b3d8ed9ce2c980c5e1c 594 SUPERFAMILY SSF50249 225 301 1.31E-26 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN78_08710 6b0d939f4b6c4b3d8ed9ce2c980c5e1c 594 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 336 539 1.6E-23 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BEN78_08710 6b0d939f4b6c4b3d8ed9ce2c980c5e1c 594 Pfam PF07498 Rho termination factor, N-terminal domain 181 223 3.4E-13 T 13-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 BEN78_08710 6b0d939f4b6c4b3d8ed9ce2c980c5e1c 594 Pfam PF07497 Rho termination factor, RNA-binding domain 228 301 5.3E-29 T 13-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 BEN78_08710 6b0d939f4b6c4b3d8ed9ce2c980c5e1c 594 SUPERFAMILY SSF52540 266 547 4.79E-68 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_08710 6b0d939f4b6c4b3d8ed9ce2c980c5e1c 594 Gene3D G3DSA:3.40.50.300 306 593 2.5E-128 T 13-10-2018 BEN78_09000 3984b9e8ce78a2b068bb6ff1964bbb93 260 Pfam PF01061 ABC-2 type transporter 25 218 5.2E-13 T 13-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 BEN78_09000 3984b9e8ce78a2b068bb6ff1964bbb93 260 PIRSF PIRSF006648 1 259 7.4E-23 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 BEN78_02620 f187625d5bc398135a3a33ae673f33a9 329 SUPERFAMILY SSF161111 29 239 6.54E-20 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily BEN78_02620 f187625d5bc398135a3a33ae673f33a9 329 Pfam PF01545 Cation efflux family 44 236 5.3E-11 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 BEN78_02620 f187625d5bc398135a3a33ae673f33a9 329 Gene3D G3DSA:1.20.1510.10 29 237 9.8E-16 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily BEN78_06070 f0dc02bdf1cd289f128f009609db5054 154 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 7 136 3.7E-14 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BEN78_06070 f0dc02bdf1cd289f128f009609db5054 154 Gene3D G3DSA:2.40.10.330 71 121 1.6E-54 T 13-10-2018 BEN78_06070 f0dc02bdf1cd289f128f009609db5054 154 SUPERFAMILY SSF54534 6 140 2.75E-37 T 13-10-2018 BEN78_06070 f0dc02bdf1cd289f128f009609db5054 154 Gene3D G3DSA:3.10.50.40 3 153 1.6E-54 T 13-10-2018 BEN78_02700 4a9075fed45b3f9aab00f70fe9d52d66 275 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 1 269 20.27 T 13-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 BEN78_02700 4a9075fed45b3f9aab00f70fe9d52d66 275 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 149 266 8.0E-38 T 13-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal BEN78_02700 4a9075fed45b3f9aab00f70fe9d52d66 275 Pfam PF13432 Tetratricopeptide repeat 153 219 3.3E-12 T 13-10-2018 BEN78_02700 4a9075fed45b3f9aab00f70fe9d52d66 275 Pfam PF16331 TolA binding protein trimerisation 27 98 2.9E-17 T 13-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 BEN78_02700 4a9075fed45b3f9aab00f70fe9d52d66 275 Gene3D G3DSA:1.25.40.10 150 273 1.2E-30 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_02700 4a9075fed45b3f9aab00f70fe9d52d66 275 Pfam PF13174 Tetratricopeptide repeat 225 256 0.012 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN78_02700 4a9075fed45b3f9aab00f70fe9d52d66 275 SUPERFAMILY SSF48452 146 260 2.08E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_04575 177b66e07e035d416a374d03d5163394 872 SUPERFAMILY SSF55785 352 461 1.74E-7 T 13-10-2018 IPR035965 PAS domain superfamily BEN78_04575 177b66e07e035d416a374d03d5163394 872 PRINTS PR00344 Bacterial sensor protein C-terminal signature 690 708 3.2E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_04575 177b66e07e035d416a374d03d5163394 872 PRINTS PR00344 Bacterial sensor protein C-terminal signature 656 670 3.2E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_04575 177b66e07e035d416a374d03d5163394 872 PRINTS PR00344 Bacterial sensor protein C-terminal signature 714 727 3.2E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_04575 177b66e07e035d416a374d03d5163394 872 PRINTS PR00344 Bacterial sensor protein C-terminal signature 674 684 3.2E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_04575 177b66e07e035d416a374d03d5163394 872 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 621 729 1.9E-19 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_04575 177b66e07e035d416a374d03d5163394 872 Pfam PF00512 His Kinase A (phospho-acceptor) domain 511 576 4.4E-10 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_04575 177b66e07e035d416a374d03d5163394 872 Gene3D G3DSA:3.30.450.20 349 480 8.7E-10 T 13-10-2018 BEN78_04575 177b66e07e035d416a374d03d5163394 872 Pfam PF02743 Cache domain 36 215 6.7E-16 T 13-10-2018 IPR033479 Double Cache domain 1 BEN78_04575 177b66e07e035d416a374d03d5163394 872 Gene3D G3DSA:3.30.565.10 582 730 1.3E-35 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_04575 177b66e07e035d416a374d03d5163394 872 Gene3D G3DSA:3.30.450.20 46 282 8.4E-67 T 13-10-2018 BEN78_04575 177b66e07e035d416a374d03d5163394 872 SMART SM00387 620 730 1.4E-28 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_04575 177b66e07e035d416a374d03d5163394 872 Gene3D G3DSA:3.30.450.20 59 181 8.4E-67 T 13-10-2018 BEN78_04575 177b66e07e035d416a374d03d5163394 872 SUPERFAMILY SSF55874 566 734 1.01E-38 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_04575 177b66e07e035d416a374d03d5163394 872 SUPERFAMILY SSF52172 748 868 7.62E-11 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_04575 177b66e07e035d416a374d03d5163394 872 SUPERFAMILY SSF47384 497 577 6.67E-13 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN78_04575 177b66e07e035d416a374d03d5163394 872 Gene3D G3DSA:3.40.50.2300 747 871 1.8E-6 T 13-10-2018 BEN78_04575 177b66e07e035d416a374d03d5163394 872 Pfam PF12860 PAS fold 364 476 1.6E-40 T 13-10-2018 BEN78_04575 177b66e07e035d416a374d03d5163394 872 SUPERFAMILY SSF103190 52 188 4.12E-12 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BEN78_04575 177b66e07e035d416a374d03d5163394 872 Gene3D G3DSA:1.10.287.130 481 574 7.6E-15 T 13-10-2018 BEN78_04575 177b66e07e035d416a374d03d5163394 872 SMART SM00388 511 576 7.4E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_14405 d2ddc303d6a51c6e8fcddb9f4d251c36 121 SUPERFAMILY SSF52172 3 121 5.27E-36 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_14405 d2ddc303d6a51c6e8fcddb9f4d251c36 121 Pfam PF00072 Response regulator receiver domain 5 116 5.3E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_14405 d2ddc303d6a51c6e8fcddb9f4d251c36 121 Gene3D G3DSA:3.40.50.12740 1 121 1.7E-38 T 13-10-2018 BEN78_14405 d2ddc303d6a51c6e8fcddb9f4d251c36 121 SMART SM00448 3 116 3.9E-37 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_14675 868b85704952141915da1fcc022238bc 569 SUPERFAMILY SSF55073 17 154 1.33E-25 T 13-10-2018 IPR029787 Nucleotide cyclase BEN78_14675 868b85704952141915da1fcc022238bc 569 SMART SM00448 440 552 2.1E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_14675 868b85704952141915da1fcc022238bc 569 SMART SM00052 172 418 4.5E-90 T 13-10-2018 IPR001633 EAL domain BEN78_14675 868b85704952141915da1fcc022238bc 569 SUPERFAMILY SSF52172 440 563 1.57E-28 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_14675 868b85704952141915da1fcc022238bc 569 Gene3D G3DSA:3.20.20.450 176 433 4.6E-87 T 13-10-2018 IPR035919 EAL domain superfamily BEN78_14675 868b85704952141915da1fcc022238bc 569 Gene3D G3DSA:3.40.50.2300 434 567 1.7E-28 T 13-10-2018 BEN78_14675 868b85704952141915da1fcc022238bc 569 Pfam PF00563 EAL domain 179 413 8.5E-72 T 13-10-2018 IPR001633 EAL domain BEN78_14675 868b85704952141915da1fcc022238bc 569 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 18 159 9.0E-19 T 13-10-2018 IPR000160 GGDEF domain BEN78_14675 868b85704952141915da1fcc022238bc 569 SMART SM00267 4 162 6.0E-8 T 13-10-2018 IPR000160 GGDEF domain BEN78_14675 868b85704952141915da1fcc022238bc 569 Pfam PF00990 Diguanylate cyclase, GGDEF domain 18 153 2.8E-22 T 13-10-2018 IPR000160 GGDEF domain BEN78_14675 868b85704952141915da1fcc022238bc 569 Pfam PF00072 Response regulator receiver domain 443 552 8.0E-19 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_14675 868b85704952141915da1fcc022238bc 569 Gene3D G3DSA:3.30.70.270 12 166 2.4E-30 T 13-10-2018 BEN78_14675 868b85704952141915da1fcc022238bc 569 SUPERFAMILY SSF141868 179 428 5.49E-79 T 13-10-2018 IPR035919 EAL domain superfamily BEN78_03760 bf6e090aa8bf3a3f60bbb75212858ffa 90 Gene3D G3DSA:1.10.10.60 2 88 9.0E-25 T 13-10-2018 BEN78_03760 bf6e090aa8bf3a3f60bbb75212858ffa 90 SUPERFAMILY SSF46689 13 88 1.54E-20 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN78_03760 bf6e090aa8bf3a3f60bbb75212858ffa 90 Pfam PF02954 Bacterial regulatory protein, Fis family 46 86 4.9E-12 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BEN78_03760 bf6e090aa8bf3a3f60bbb75212858ffa 90 PIRSF PIRSF002097 1 89 7.2E-31 T 13-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 BEN78_03760 bf6e090aa8bf3a3f60bbb75212858ffa 90 PRINTS PR01591 DNA-binding protein FIS signature 17 33 2.6E-8 T 13-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 BEN78_03760 bf6e090aa8bf3a3f60bbb75212858ffa 90 PRINTS PR01591 DNA-binding protein FIS signature 33 48 2.6E-8 T 13-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 BEN78_03760 bf6e090aa8bf3a3f60bbb75212858ffa 90 PRINTS PR01591 DNA-binding protein FIS signature 48 60 2.6E-8 T 13-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 BEN78_03760 bf6e090aa8bf3a3f60bbb75212858ffa 90 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 69 89 5.2E-11 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BEN78_03760 bf6e090aa8bf3a3f60bbb75212858ffa 90 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 52 69 5.2E-11 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BEN78_08100 6516fede1527f117cdaff8bfcc3b729d 337 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 6 214 4.4E-40 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 BEN78_08100 6516fede1527f117cdaff8bfcc3b729d 337 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 326 7.0E-94 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 BEN78_08100 6516fede1527f117cdaff8bfcc3b729d 337 PIRSF PIRSF000267 2 337 7.7E-88 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 BEN78_04210 1a8f3f8cdeee3443ea1008f54bc593f0 231 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 87 199 1.1E-17 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BEN78_04210 1a8f3f8cdeee3443ea1008f54bc593f0 231 Pfam PF13419 Haloacid dehalogenase-like hydrolase 21 199 8.9E-28 T 13-10-2018 BEN78_04210 1a8f3f8cdeee3443ea1008f54bc593f0 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 161 181 5.6E-10 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BEN78_04210 1a8f3f8cdeee3443ea1008f54bc593f0 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 18 29 5.6E-10 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BEN78_04210 1a8f3f8cdeee3443ea1008f54bc593f0 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 188 201 5.6E-10 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BEN78_04210 1a8f3f8cdeee3443ea1008f54bc593f0 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 143 159 5.6E-10 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BEN78_04210 1a8f3f8cdeee3443ea1008f54bc593f0 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 112 125 5.6E-10 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BEN78_04210 1a8f3f8cdeee3443ea1008f54bc593f0 231 Gene3D G3DSA:3.40.50.1000 21 206 1.4E-47 T 13-10-2018 IPR023214 HAD superfamily BEN78_04210 1a8f3f8cdeee3443ea1008f54bc593f0 231 Gene3D G3DSA:1.10.150.240 33 98 1.4E-47 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BEN78_04210 1a8f3f8cdeee3443ea1008f54bc593f0 231 SUPERFAMILY SSF56784 20 227 2.57E-49 T 13-10-2018 IPR036412 HAD-like superfamily BEN78_05485 3612c80db4aabb06a6722640718ce994 430 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 6 429 3.3E-165 T 13-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BEN78_05485 3612c80db4aabb06a6722640718ce994 430 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 340 349 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BEN78_05485 3612c80db4aabb06a6722640718ce994 430 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 140 349 1.2E-70 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BEN78_05485 3612c80db4aabb06a6722640718ce994 430 SUPERFAMILY SSF52540 87 355 3.66E-92 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_05485 3612c80db4aabb06a6722640718ce994 430 Gene3D G3DSA:3.40.50.12240 6 430 2.0E-142 T 13-10-2018 BEN78_05485 3612c80db4aabb06a6722640718ce994 430 SMART SM00382 152 333 2.4E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_05485 3612c80db4aabb06a6722640718ce994 430 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 17 83 3.7E-4 T 13-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BEN78_04985 11145958552375a84a94b9fd17e3cac6 193 SUPERFAMILY SSF51161 4 157 4.3E-44 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily BEN78_04985 11145958552375a84a94b9fd17e3cac6 193 Gene3D G3DSA:2.160.10.10 4 151 2.3E-46 T 13-10-2018 BEN78_04985 11145958552375a84a94b9fd17e3cac6 193 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 14 49 7.0E-7 T 13-10-2018 IPR001451 Hexapeptide repeat BEN78_04985 11145958552375a84a94b9fd17e3cac6 193 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 51 75 6.5E-5 T 13-10-2018 IPR001451 Hexapeptide repeat BEN78_04985 11145958552375a84a94b9fd17e3cac6 193 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 107 136 6.0E-4 T 13-10-2018 IPR001451 Hexapeptide repeat BEN78_04985 11145958552375a84a94b9fd17e3cac6 193 Gene3D G3DSA:2.20.70.110 153 189 2.7E-18 T 13-10-2018 BEN78_10975 fddbe35c343420b3fabfda27d96e67f9 217 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 5 97 23.064 T 13-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 BEN78_10975 fddbe35c343420b3fabfda27d96e67f9 217 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 8 174 1.9E-37 T 13-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 BEN78_10975 fddbe35c343420b3fabfda27d96e67f9 217 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 5 191 28.044 T 13-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 BEN78_10975 fddbe35c343420b3fabfda27d96e67f9 217 Gene3D G3DSA:2.40.240.10 3 97 1.1E-31 T 13-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BEN78_10975 fddbe35c343420b3fabfda27d96e67f9 217 SUPERFAMILY SSF50715 5 196 1.36E-51 T 13-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BEN78_10975 fddbe35c343420b3fabfda27d96e67f9 217 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 103 189 1.3E-23 T 13-10-2018 IPR020057 Ribosomal protein L25, beta domain BEN78_10975 fddbe35c343420b3fabfda27d96e67f9 217 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 6 97 2.0E-38 T 13-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 BEN78_10975 fddbe35c343420b3fabfda27d96e67f9 217 Pfam PF01386 Ribosomal L25p family 7 94 3.4E-26 T 13-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 BEN78_10975 fddbe35c343420b3fabfda27d96e67f9 217 Gene3D G3DSA:2.170.120.20 99 197 6.4E-24 T 13-10-2018 IPR037121 Ribosomal protein L25, C-terminal BEN78_10940 f3ef570234aec26917cc13c258a31b8a 360 SUPERFAMILY SSF75620 12 354 4.58E-125 T 13-10-2018 BEN78_10940 f3ef570234aec26917cc13c258a31b8a 360 Gene3D G3DSA:3.30.160.20 222 285 4.0E-33 T 13-10-2018 BEN78_10940 f3ef570234aec26917cc13c258a31b8a 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 5 358 6.9E-144 T 13-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 BEN78_10940 f3ef570234aec26917cc13c258a31b8a 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 358 38.425 T 13-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 BEN78_10940 f3ef570234aec26917cc13c258a31b8a 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 BEN78_10940 f3ef570234aec26917cc13c258a31b8a 360 SMART SM00937 63 178 3.3E-57 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 BEN78_10940 f3ef570234aec26917cc13c258a31b8a 360 Pfam PF00472 RF-1 domain 214 321 1.3E-39 T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 BEN78_10940 f3ef570234aec26917cc13c258a31b8a 360 Gene3D G3DSA:3.30.70.1660 107 221 1.3E-44 T 13-10-2018 BEN78_10940 f3ef570234aec26917cc13c258a31b8a 360 Gene3D G3DSA:3.30.70.1660 286 360 4.3E-12 T 13-10-2018 BEN78_10940 f3ef570234aec26917cc13c258a31b8a 360 Pfam PF03462 PCRF domain 13 203 1.7E-67 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 BEN78_09265 60da51102637be07633f451bfcb6f895 943 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 879 943 1.6E-19 T 13-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 BEN78_09265 60da51102637be07633f451bfcb6f895 943 Gene3D G3DSA:3.90.740.10 210 255 4.4E-6 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BEN78_09265 60da51102637be07633f451bfcb6f895 943 SUPERFAMILY SSF52374 3 636 9.79E-129 T 13-10-2018 BEN78_09265 60da51102637be07633f451bfcb6f895 943 Gene3D G3DSA:1.10.730.10 578 814 1.2E-66 T 13-10-2018 BEN78_09265 60da51102637be07633f451bfcb6f895 943 PRINTS PR00986 Valyl-tRNA synthetase signature 501 519 2.8E-34 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BEN78_09265 60da51102637be07633f451bfcb6f895 943 PRINTS PR00986 Valyl-tRNA synthetase signature 466 487 2.8E-34 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BEN78_09265 60da51102637be07633f451bfcb6f895 943 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 2.8E-34 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BEN78_09265 60da51102637be07633f451bfcb6f895 943 PRINTS PR00986 Valyl-tRNA synthetase signature 366 379 2.8E-34 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BEN78_09265 60da51102637be07633f451bfcb6f895 943 PRINTS PR00986 Valyl-tRNA synthetase signature 250 267 2.8E-34 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BEN78_09265 60da51102637be07633f451bfcb6f895 943 SUPERFAMILY SSF47323 637 894 4.11E-62 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN78_09265 60da51102637be07633f451bfcb6f895 943 Hamap MF_02004 Valine--tRNA ligase [valS]. 3 943 15.53 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BEN78_09265 60da51102637be07633f451bfcb6f895 943 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN78_09265 60da51102637be07633f451bfcb6f895 943 Gene3D G3DSA:3.90.740.10 256 312 4.1E-8 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BEN78_09265 60da51102637be07633f451bfcb6f895 943 SUPERFAMILY SSF46589 879 943 2.88E-16 T 13-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 BEN78_09265 60da51102637be07633f451bfcb6f895 943 Gene3D G3DSA:1.10.287.380 872 943 1.5E-20 T 13-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 BEN78_09265 60da51102637be07633f451bfcb6f895 943 Gene3D G3DSA:3.40.50.620 5 203 1.8E-53 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_09265 60da51102637be07633f451bfcb6f895 943 Pfam PF08264 Anticodon-binding domain of tRNA 669 818 6.4E-40 T 13-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 BEN78_09265 60da51102637be07633f451bfcb6f895 943 SUPERFAMILY SSF50677 192 362 7.59E-57 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BEN78_09265 60da51102637be07633f451bfcb6f895 943 TIGRFAM TIGR00422 valS: valine--tRNA ligase 5 925 0.0 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BEN78_09265 60da51102637be07633f451bfcb6f895 943 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 16 626 2.6E-198 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN78_09265 60da51102637be07633f451bfcb6f895 943 Gene3D G3DSA:3.40.50.620 331 550 5.8E-69 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_05150 250f789da605cbeef872995338840493 350 Pfam PF12706 Beta-lactamase superfamily domain 100 298 1.8E-47 T 13-10-2018 IPR001279 Metallo-beta-lactamase BEN78_05150 250f789da605cbeef872995338840493 350 SUPERFAMILY SSF56281 83 339 3.64E-36 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN78_05150 250f789da605cbeef872995338840493 350 PIRSF PIRSF038896 8 350 1.4E-89 T 13-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 BEN78_05150 250f789da605cbeef872995338840493 350 Gene3D G3DSA:3.60.15.10 73 348 1.1E-84 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN78_01845 32a041b6291b1e0d1e011ea1180e8ad2 539 Gene3D G3DSA:3.20.20.80 6 455 2.5E-174 T 13-10-2018 BEN78_01845 32a041b6291b1e0d1e011ea1180e8ad2 539 Pfam PF00128 Alpha amylase, catalytic domain 29 377 8.1E-87 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BEN78_01845 32a041b6291b1e0d1e011ea1180e8ad2 539 SUPERFAMILY SSF51445 4 460 3.63E-132 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily BEN78_01845 32a041b6291b1e0d1e011ea1180e8ad2 539 Gene3D G3DSA:2.60.40.1180 465 539 2.3E-11 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta BEN78_01845 32a041b6291b1e0d1e011ea1180e8ad2 539 Gene3D G3DSA:3.90.400.10 106 176 2.5E-174 T 13-10-2018 BEN78_01845 32a041b6291b1e0d1e011ea1180e8ad2 539 SMART SM00642 14 402 1.8E-115 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BEN78_01845 32a041b6291b1e0d1e011ea1180e8ad2 539 SUPERFAMILY SSF51011 463 536 1.78E-8 T 13-10-2018 BEN78_01595 705d2cfe0d9ad3cb157f9e9f97d50244 500 PIRSF PIRSF000538 1 499 7.3E-111 T 13-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 BEN78_01595 705d2cfe0d9ad3cb157f9e9f97d50244 500 TIGRFAM TIGR01312 XylB: xylulokinase 6 487 2.0E-153 T 13-10-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 BEN78_01595 705d2cfe0d9ad3cb157f9e9f97d50244 500 Gene3D G3DSA:3.30.420.40 252 488 1.8E-62 T 13-10-2018 BEN78_01595 705d2cfe0d9ad3cb157f9e9f97d50244 500 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 258 440 1.1E-28 T 13-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 BEN78_01595 705d2cfe0d9ad3cb157f9e9f97d50244 500 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 248 1.3E-55 T 13-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 BEN78_01595 705d2cfe0d9ad3cb157f9e9f97d50244 500 Gene3D G3DSA:3.30.420.40 1 249 4.4E-72 T 13-10-2018 BEN78_01595 705d2cfe0d9ad3cb157f9e9f97d50244 500 SUPERFAMILY SSF53067 4 251 3.63E-56 T 13-10-2018 BEN78_01595 705d2cfe0d9ad3cb157f9e9f97d50244 500 SUPERFAMILY SSF53067 250 494 6.39E-48 T 13-10-2018 BEN78_01595 705d2cfe0d9ad3cb157f9e9f97d50244 500 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 352 373 - T 13-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 BEN78_08940 0f2e082672bdd28b92e53682b6a25256 226 SUPERFAMILY SSF55681 10 210 5.72E-72 T 13-10-2018 BEN78_08940 0f2e082672bdd28b92e53682b6a25256 226 PIRSF PIRSF016262 7 217 2.3E-60 T 13-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BEN78_08940 0f2e082672bdd28b92e53682b6a25256 226 Pfam PF03099 Biotin/lipoate A/B protein ligase family 65 163 2.4E-11 T 13-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 BEN78_08940 0f2e082672bdd28b92e53682b6a25256 226 Gene3D G3DSA:3.30.930.10 6 208 3.7E-67 T 13-10-2018 BEN78_08940 0f2e082672bdd28b92e53682b6a25256 226 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 75 90 - T 13-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 BEN78_08940 0f2e082672bdd28b92e53682b6a25256 226 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 79 132 2.0E-19 T 13-10-2018 BEN78_08940 0f2e082672bdd28b92e53682b6a25256 226 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 31 207 2.6E-66 T 13-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BEN78_08940 0f2e082672bdd28b92e53682b6a25256 226 Hamap MF_00013 Octanoyltransferase [lipB]. 9 210 38.598 T 13-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BEN78_12015 446d024e10c8a739671f7d50dc542276 278 Gene3D G3DSA:3.40.50.1820 9 278 4.2E-22 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_12015 446d024e10c8a739671f7d50dc542276 278 SUPERFAMILY SSF53474 21 276 2.94E-22 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_12015 446d024e10c8a739671f7d50dc542276 278 PIRSF PIRSF037442 1 278 5.0E-60 T 13-10-2018 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 BEN78_12015 446d024e10c8a739671f7d50dc542276 278 Pfam PF12146 Serine aminopeptidase, S33 28 162 5.3E-14 T 13-10-2018 IPR022742 Serine aminopeptidase, S33 BEN78_09715 79fc0ee1f725e9f44c24f41c45da77fe 600 SMART SM00267 365 537 2.0E-49 T 13-10-2018 IPR000160 GGDEF domain BEN78_09715 79fc0ee1f725e9f44c24f41c45da77fe 600 Gene3D G3DSA:1.25.40.10 22 195 3.4E-14 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_09715 79fc0ee1f725e9f44c24f41c45da77fe 600 SUPERFAMILY SSF48452 198 310 2.43E-11 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_09715 79fc0ee1f725e9f44c24f41c45da77fe 600 Gene3D G3DSA:3.30.70.270 364 535 1.5E-49 T 13-10-2018 BEN78_09715 79fc0ee1f725e9f44c24f41c45da77fe 600 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 373 533 3.5E-39 T 13-10-2018 IPR000160 GGDEF domain BEN78_09715 79fc0ee1f725e9f44c24f41c45da77fe 600 SUPERFAMILY SSF48452 28 187 2.18E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_09715 79fc0ee1f725e9f44c24f41c45da77fe 600 Gene3D G3DSA:1.25.40.10 196 345 1.7E-14 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_09715 79fc0ee1f725e9f44c24f41c45da77fe 600 SMART SM00028 273 306 17.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN78_09715 79fc0ee1f725e9f44c24f41c45da77fe 600 SMART SM00028 233 266 79.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN78_09715 79fc0ee1f725e9f44c24f41c45da77fe 600 SMART SM00028 193 226 310.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN78_09715 79fc0ee1f725e9f44c24f41c45da77fe 600 SMART SM00028 106 143 290.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN78_09715 79fc0ee1f725e9f44c24f41c45da77fe 600 SMART SM00028 28 61 300.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN78_09715 79fc0ee1f725e9f44c24f41c45da77fe 600 Pfam PF13181 Tetratricopeptide repeat 239 265 0.12 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN78_09715 79fc0ee1f725e9f44c24f41c45da77fe 600 Pfam PF00990 Diguanylate cyclase, GGDEF domain 377 532 2.6E-36 T 13-10-2018 IPR000160 GGDEF domain BEN78_09715 79fc0ee1f725e9f44c24f41c45da77fe 600 SUPERFAMILY SSF55073 381 534 5.57E-40 T 13-10-2018 IPR029787 Nucleotide cyclase BEN78_15065 b9d4c0dc9fb76a08592d1981f1fd03b6 670 Pfam PF04632 Fusaric acid resistance protein family 2 658 5.2E-132 T 13-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 BEN78_13315 9d503096606114e59c67cb4f8fa3a9d0 531 Pfam PF00849 RNA pseudouridylate synthase 95 230 2.3E-17 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN78_13315 9d503096606114e59c67cb4f8fa3a9d0 531 Gene3D G3DSA:3.30.70.1560 157 252 8.2E-47 T 13-10-2018 BEN78_13315 9d503096606114e59c67cb4f8fa3a9d0 531 SUPERFAMILY SSF55120 91 268 6.72E-38 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN78_13315 9d503096606114e59c67cb4f8fa3a9d0 531 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 99 263 1.0E-49 T 13-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 BEN78_13315 9d503096606114e59c67cb4f8fa3a9d0 531 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 133 147 - T 13-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 BEN78_13315 9d503096606114e59c67cb4f8fa3a9d0 531 SMART SM00363 32 90 7.5E-11 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_13315 9d503096606114e59c67cb4f8fa3a9d0 531 Pfam PF01479 S4 domain 32 77 1.5E-10 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_13315 9d503096606114e59c67cb4f8fa3a9d0 531 Gene3D G3DSA:3.30.70.580 97 259 8.2E-47 T 13-10-2018 BEN78_13315 9d503096606114e59c67cb4f8fa3a9d0 531 SUPERFAMILY SSF55174 29 123 7.36E-16 T 13-10-2018 BEN78_13315 9d503096606114e59c67cb4f8fa3a9d0 531 Gene3D G3DSA:3.10.290.10 29 85 1.9E-16 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BEN78_04550 f2c83e39474f519795a24f203926be35 761 Gene3D G3DSA:3.40.50.10950 444 748 8.3E-87 T 13-10-2018 BEN78_04550 f2c83e39474f519795a24f203926be35 761 Gene3D G3DSA:3.40.50.10750 571 724 8.3E-87 T 13-10-2018 BEN78_04550 f2c83e39474f519795a24f203926be35 761 Pfam PF01515 Phosphate acetyl/butaryl transferase 428 748 2.4E-87 T 13-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 BEN78_04550 f2c83e39474f519795a24f203926be35 761 SUPERFAMILY SSF53659 428 751 2.01E-84 T 13-10-2018 BEN78_04550 f2c83e39474f519795a24f203926be35 761 SUPERFAMILY SSF53223 11 162 1.01E-51 T 13-10-2018 BEN78_04550 f2c83e39474f519795a24f203926be35 761 Gene3D G3DSA:3.40.50.10380 1 161 1.2E-67 T 13-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 BEN78_04550 f2c83e39474f519795a24f203926be35 761 Pfam PF03949 Malic enzyme, NAD binding domain 166 362 2.4E-21 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 BEN78_04550 f2c83e39474f519795a24f203926be35 761 PIRSF PIRSF036684 1 756 0.0 T 13-10-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 BEN78_04550 f2c83e39474f519795a24f203926be35 761 SUPERFAMILY SSF51735 164 451 1.01E-86 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_04550 f2c83e39474f519795a24f203926be35 761 SMART SM00919 164 399 3.2E-128 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 BEN78_04550 f2c83e39474f519795a24f203926be35 761 SMART SM01274 19 152 1.6E-77 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 BEN78_04550 f2c83e39474f519795a24f203926be35 761 Gene3D G3DSA:3.40.50.720 162 443 3.5E-81 T 13-10-2018 BEN78_04550 f2c83e39474f519795a24f203926be35 761 Pfam PF00390 Malic enzyme, N-terminal domain 20 152 2.7E-27 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 BEN78_00175 1104514d873bf7e70aa735f8be7dafd5 255 SMART SM00855 12 186 1.3E-19 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 BEN78_00175 1104514d873bf7e70aa735f8be7dafd5 255 SUPERFAMILY SSF53254 12 222 5.55E-45 T 13-10-2018 IPR029033 Histidine phosphatase superfamily BEN78_00175 1104514d873bf7e70aa735f8be7dafd5 255 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 15 24 - T 13-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 BEN78_00175 1104514d873bf7e70aa735f8be7dafd5 255 PIRSF PIRSF000709 9 205 1.7E-20 T 13-10-2018 BEN78_00175 1104514d873bf7e70aa735f8be7dafd5 255 Gene3D G3DSA:3.40.50.1240 3 230 7.0E-44 T 13-10-2018 IPR029033 Histidine phosphatase superfamily BEN78_00175 1104514d873bf7e70aa735f8be7dafd5 255 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 13 219 4.8E-34 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 BEN78_14665 b20d3eb0ba34251600471c6c0d6f63c7 111 SUPERFAMILY SSF140566 5 82 4.58E-7 T 13-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 BEN78_14440 cfb4ec4fa5f3b8ffa2d5636cef1ab350 205 Gene3D G3DSA:1.10.287.500 119 164 5.2E-7 T 13-10-2018 BEN78_14440 cfb4ec4fa5f3b8ffa2d5636cef1ab350 205 Gene3D G3DSA:1.10.287.500 65 118 2.9E-7 T 13-10-2018 BEN78_14440 cfb4ec4fa5f3b8ffa2d5636cef1ab350 205 Pfam PF04344 Chemotaxis phosphatase, CheZ 122 204 1.7E-10 T 13-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 BEN78_14440 cfb4ec4fa5f3b8ffa2d5636cef1ab350 205 Pfam PF04344 Chemotaxis phosphatase, CheZ 48 113 3.6E-10 T 13-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 BEN78_14440 cfb4ec4fa5f3b8ffa2d5636cef1ab350 205 PIRSF PIRSF002884 115 205 6.3E-18 T 13-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 BEN78_14440 cfb4ec4fa5f3b8ffa2d5636cef1ab350 205 PIRSF PIRSF002884 24 125 5.7E-20 T 13-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 BEN78_14440 cfb4ec4fa5f3b8ffa2d5636cef1ab350 205 SUPERFAMILY SSF75708 39 204 8.37E-30 T 13-10-2018 BEN78_01970 99ab1ef6b32371b045efe3f10300330b 419 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 291 393 4.9E-37 T 13-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 BEN78_01970 99ab1ef6b32371b045efe3f10300330b 419 Pfam PF00033 Cytochrome b/b6/petB 32 220 5.9E-69 T 13-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 BEN78_01970 99ab1ef6b32371b045efe3f10300330b 419 SUPERFAMILY SSF81342 23 292 1.73E-95 T 13-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 BEN78_01970 99ab1ef6b32371b045efe3f10300330b 419 PIRSF PIRSF038885 6 419 1.2E-153 T 13-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 BEN78_01970 99ab1ef6b32371b045efe3f10300330b 419 SUPERFAMILY SSF81648 294 408 1.59E-30 T 13-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 BEN78_01970 99ab1ef6b32371b045efe3f10300330b 419 Gene3D G3DSA:1.20.810.10 4 419 9.0E-146 T 13-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 BEN78_06455 bde397dc14b73244f6044eeadb76e870 442 Gene3D G3DSA:3.30.1360.120 1 120 3.7E-42 T 13-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 BEN78_06455 bde397dc14b73244f6044eeadb76e870 442 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 442 31.543 T 13-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 BEN78_06455 bde397dc14b73244f6044eeadb76e870 442 SUPERFAMILY SSF52540 72 361 3.82E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_06455 bde397dc14b73244f6044eeadb76e870 442 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 442 5.6E-97 T 13-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 BEN78_06455 bde397dc14b73244f6044eeadb76e870 442 Gene3D G3DSA:1.20.120.430 121 442 1.1E-95 T 13-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 BEN78_06455 bde397dc14b73244f6044eeadb76e870 442 Pfam PF01926 50S ribosome-binding GTPase 218 321 7.0E-24 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 BEN78_06455 bde397dc14b73244f6044eeadb76e870 442 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 119 3.6E-37 T 13-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 BEN78_06455 bde397dc14b73244f6044eeadb76e870 442 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 218 238 2.6E-5 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 BEN78_06455 bde397dc14b73244f6044eeadb76e870 442 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 285 303 2.6E-5 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 BEN78_06455 bde397dc14b73244f6044eeadb76e870 442 Pfam PF12631 MnmE helical domain 122 439 1.4E-50 T 13-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 BEN78_06455 bde397dc14b73244f6044eeadb76e870 442 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 219 335 5.1E-22 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BEN78_06455 bde397dc14b73244f6044eeadb76e870 442 Gene3D G3DSA:3.40.50.300 216 371 1.1E-95 T 13-10-2018 BEN78_07655 c20b84f1fe04e7df04deaf5bc77af536 326 Pfam PF00144 Beta-lactamase 38 315 8.1E-25 T 13-10-2018 IPR001466 Beta-lactamase-related BEN78_07655 c20b84f1fe04e7df04deaf5bc77af536 326 Gene3D G3DSA:3.40.710.10 12 312 7.9E-59 T 13-10-2018 BEN78_07655 c20b84f1fe04e7df04deaf5bc77af536 326 SUPERFAMILY SSF56601 2 320 1.3E-64 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BEN78_14510 2f63fed817efba2bc7e09e74db35187d 358 PRINTS PR01007 Flagellar hook-length control protein signature 268 283 2.6E-11 T 13-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 BEN78_14510 2f63fed817efba2bc7e09e74db35187d 358 PRINTS PR01007 Flagellar hook-length control protein signature 250 268 2.6E-11 T 13-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 BEN78_14510 2f63fed817efba2bc7e09e74db35187d 358 PRINTS PR01007 Flagellar hook-length control protein signature 283 306 2.6E-11 T 13-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 BEN78_14510 2f63fed817efba2bc7e09e74db35187d 358 PRINTS PR01007 Flagellar hook-length control protein signature 202 224 2.6E-11 T 13-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 BEN78_14510 2f63fed817efba2bc7e09e74db35187d 358 Pfam PF02120 Flagellar hook-length control protein FliK 236 316 7.1E-20 T 13-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal BEN78_14510 2f63fed817efba2bc7e09e74db35187d 358 Gene3D G3DSA:3.30.750.140 214 325 3.1E-29 T 13-10-2018 IPR038610 FliK-like, C-terminal domain superfamily BEN78_14365 3793e7833649d8cf93d34cbc4e8dede5 289 SMART SM00138 20 283 3.0E-94 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BEN78_14365 3793e7833649d8cf93d34cbc4e8dede5 289 Gene3D G3DSA:1.10.155.10 11 86 8.8E-28 T 13-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily BEN78_14365 3793e7833649d8cf93d34cbc4e8dede5 289 Pfam PF03705 CheR methyltransferase, all-alpha domain 22 73 7.3E-19 T 13-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal BEN78_14365 3793e7833649d8cf93d34cbc4e8dede5 289 SUPERFAMILY SSF53335 88 280 3.01E-47 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_14365 3793e7833649d8cf93d34cbc4e8dede5 289 PIRSF PIRSF000410 2 284 3.2E-89 T 13-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR BEN78_14365 3793e7833649d8cf93d34cbc4e8dede5 289 PRINTS PR00996 Glutamate methyltransferase family signature 151 167 1.7E-38 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BEN78_14365 3793e7833649d8cf93d34cbc4e8dede5 289 PRINTS PR00996 Glutamate methyltransferase family signature 42 55 1.7E-38 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BEN78_14365 3793e7833649d8cf93d34cbc4e8dede5 289 PRINTS PR00996 Glutamate methyltransferase family signature 81 93 1.7E-38 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BEN78_14365 3793e7833649d8cf93d34cbc4e8dede5 289 PRINTS PR00996 Glutamate methyltransferase family signature 242 265 1.7E-38 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BEN78_14365 3793e7833649d8cf93d34cbc4e8dede5 289 PRINTS PR00996 Glutamate methyltransferase family signature 223 237 1.7E-38 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BEN78_14365 3793e7833649d8cf93d34cbc4e8dede5 289 PRINTS PR00996 Glutamate methyltransferase family signature 117 137 1.7E-38 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BEN78_14365 3793e7833649d8cf93d34cbc4e8dede5 289 Gene3D G3DSA:3.40.50.150 87 283 3.9E-58 T 13-10-2018 BEN78_14365 3793e7833649d8cf93d34cbc4e8dede5 289 SUPERFAMILY SSF47757 13 87 1.44E-22 T 13-10-2018 BEN78_14365 3793e7833649d8cf93d34cbc4e8dede5 289 Pfam PF01739 CheR methyltransferase, SAM binding domain 88 273 1.5E-51 T 13-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal BEN78_02080 6e84e6be20b663a0ce1f1df20dd17b58 646 SUPERFAMILY SSF82171 25 282 7.46E-9 T 13-10-2018 BEN78_02080 6e84e6be20b663a0ce1f1df20dd17b58 646 Pfam PF00326 Prolyl oligopeptidase family 431 640 4.2E-49 T 13-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 BEN78_02080 6e84e6be20b663a0ce1f1df20dd17b58 646 Gene3D G3DSA:3.40.50.1820 334 645 3.3E-74 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_02080 6e84e6be20b663a0ce1f1df20dd17b58 646 SUPERFAMILY SSF53474 386 640 4.25E-69 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_12350 229e2eae842a603e62e8776688f5f988 86 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.3E-37 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_12350 229e2eae842a603e62e8776688f5f988 86 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.3E-37 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_12350 229e2eae842a603e62e8776688f5f988 86 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.3E-37 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_12350 229e2eae842a603e62e8776688f5f988 86 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 28.852 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_12350 229e2eae842a603e62e8776688f5f988 86 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 4.0E-17 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_12350 229e2eae842a603e62e8776688f5f988 86 SUPERFAMILY SSF110324 2 82 1.15E-33 T 13-10-2018 BEN78_12350 229e2eae842a603e62e8776688f5f988 86 Pfam PF01016 Ribosomal L27 protein 2 82 7.9E-38 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_12350 229e2eae842a603e62e8776688f5f988 86 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 13-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_12350 229e2eae842a603e62e8776688f5f988 86 Gene3D G3DSA:2.40.50.100 21 86 4.4E-30 T 13-10-2018 BEN78_12350 229e2eae842a603e62e8776688f5f988 86 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 1.0E-37 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_04525 0d7c7785634e59375d64b66b60722136 678 SUPERFAMILY SSF55874 526 675 3.41E-23 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_04525 0d7c7785634e59375d64b66b60722136 678 SUPERFAMILY SSF55874 9 186 9.04E-18 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_04525 0d7c7785634e59375d64b66b60722136 678 SMART SM00387 566 677 8.8E-14 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_04525 0d7c7785634e59375d64b66b60722136 678 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 568 674 1.2E-9 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_04525 0d7c7785634e59375d64b66b60722136 678 Gene3D G3DSA:3.30.565.10 526 676 7.6E-27 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_04525 0d7c7785634e59375d64b66b60722136 678 PRINTS PR00344 Bacterial sensor protein C-terminal signature 636 654 8.0E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_04525 0d7c7785634e59375d64b66b60722136 678 PRINTS PR00344 Bacterial sensor protein C-terminal signature 661 674 8.0E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_04525 0d7c7785634e59375d64b66b60722136 678 PRINTS PR00344 Bacterial sensor protein C-terminal signature 607 621 8.0E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_04525 0d7c7785634e59375d64b66b60722136 678 Gene3D G3DSA:3.30.565.10 2 201 2.8E-25 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_04525 0d7c7785634e59375d64b66b60722136 678 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 22 153 8.8E-26 T 13-10-2018 BEN78_11100 c83bd567fdc6d500e46e3f84c24fe925 275 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 5.8E-34 T 13-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_11100 c83bd567fdc6d500e46e3f84c24fe925 275 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 274 1.9E-129 T 13-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 BEN78_11100 c83bd567fdc6d500e46e3f84c24fe925 275 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 274 46.496 T 13-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 BEN78_11100 c83bd567fdc6d500e46e3f84c24fe925 275 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 251 5.1E-54 T 13-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 BEN78_11100 c83bd567fdc6d500e46e3f84c24fe925 275 SUPERFAMILY SSF50104 127 273 7.22E-57 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily BEN78_11100 c83bd567fdc6d500e46e3f84c24fe925 275 SMART SM01383 42 118 2.6E-44 T 13-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_11100 c83bd567fdc6d500e46e3f84c24fe925 275 Gene3D G3DSA:4.10.950.10 196 275 1.3E-32 T 13-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11100 c83bd567fdc6d500e46e3f84c24fe925 275 PIRSF PIRSF002158 6 275 6.7E-98 T 13-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_11100 c83bd567fdc6d500e46e3f84c24fe925 275 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 13-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11100 c83bd567fdc6d500e46e3f84c24fe925 275 Gene3D G3DSA:2.40.50.140 1 114 3.5E-48 T 13-10-2018 BEN78_11100 c83bd567fdc6d500e46e3f84c24fe925 275 SUPERFAMILY SSF50249 3 125 1.17E-47 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN78_11100 c83bd567fdc6d500e46e3f84c24fe925 275 Gene3D G3DSA:2.30.30.30 115 195 2.8E-32 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 BEN78_11100 c83bd567fdc6d500e46e3f84c24fe925 275 SMART SM01382 124 253 7.8E-87 T 13-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 BEN78_15255 f2e9e8829010523f625acb6460db539f 339 Pfam PF10030 Uncharacterized protein conserved in bacteria (DUF2272) 81 289 1.7E-56 T 13-10-2018 IPR019262 Domain of unknown function DUF2272 BEN78_15255 f2e9e8829010523f625acb6460db539f 339 PIRSF PIRSF028415 1 331 1.1E-75 T 13-10-2018 IPR014545 Uncharacterised conserved protein UCP028415 BEN78_11105 225b454edb5040bc9be19fe431cc3e08 90 SUPERFAMILY SSF54570 3 83 7.85E-34 T 13-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11105 225b454edb5040bc9be19fe431cc3e08 90 PRINTS PR00975 Ribosomal protein S19 family signature 64 79 1.6E-22 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11105 225b454edb5040bc9be19fe431cc3e08 90 PRINTS PR00975 Ribosomal protein S19 family signature 32 51 1.6E-22 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11105 225b454edb5040bc9be19fe431cc3e08 90 PRINTS PR00975 Ribosomal protein S19 family signature 52 64 1.6E-22 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11105 225b454edb5040bc9be19fe431cc3e08 90 ProSitePatterns PS00323 Ribosomal protein S19 signature. 52 76 - T 13-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11105 225b454edb5040bc9be19fe431cc3e08 90 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 88 25.418 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11105 225b454edb5040bc9be19fe431cc3e08 90 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 88 5.7E-43 T 13-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 BEN78_11105 225b454edb5040bc9be19fe431cc3e08 90 PIRSF PIRSF002144 1 90 4.4E-32 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11105 225b454edb5040bc9be19fe431cc3e08 90 Pfam PF00203 Ribosomal protein S19 3 82 7.9E-36 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11105 225b454edb5040bc9be19fe431cc3e08 90 Gene3D G3DSA:3.30.860.10 1 90 4.5E-39 T 13-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_15415 59b37e34890ea6b9386979c76ab40a0f 447 Pfam PF01979 Amidohydrolase family 66 413 3.6E-63 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BEN78_15415 59b37e34890ea6b9386979c76ab40a0f 447 Gene3D G3DSA:2.30.40.10 12 432 9.6E-168 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BEN78_15415 59b37e34890ea6b9386979c76ab40a0f 447 SUPERFAMILY SSF51338 10 440 1.09E-22 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BEN78_15415 59b37e34890ea6b9386979c76ab40a0f 447 SUPERFAMILY SSF51556 68 367 4.13E-96 T 13-10-2018 IPR032466 Metal-dependent hydrolase BEN78_15415 59b37e34890ea6b9386979c76ab40a0f 447 Gene3D G3DSA:3.20.20.140 69 359 9.6E-168 T 13-10-2018 BEN78_08825 ccd96ea9969233b687fcbce1b53f5e04 151 SUPERFAMILY SSF53927 7 148 6.86E-35 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 BEN78_08825 ccd96ea9969233b687fcbce1b53f5e04 151 Gene3D G3DSA:3.40.140.10 3 150 2.5E-34 T 13-10-2018 BEN78_08825 ccd96ea9969233b687fcbce1b53f5e04 151 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 8 102 5.5E-16 T 13-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain BEN78_08345 dae9d6971ee326c8cb00f2a6f32037e0 451 Pfam PF04932 O-Antigen ligase 224 375 1.5E-20 T 13-10-2018 IPR007016 O-antigen ligase-related BEN78_01510 05940ba9a4ccec3b14ac0a16d1729466 479 Gene3D G3DSA:3.40.710.10 18 349 2.4E-67 T 13-10-2018 BEN78_01510 05940ba9a4ccec3b14ac0a16d1729466 479 Pfam PF00144 Beta-lactamase 38 322 3.8E-56 T 13-10-2018 IPR001466 Beta-lactamase-related BEN78_01510 05940ba9a4ccec3b14ac0a16d1729466 479 SUPERFAMILY SSF56601 25 327 1.78E-66 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BEN78_01510 05940ba9a4ccec3b14ac0a16d1729466 479 SUPERFAMILY SSF48452 368 473 9.8E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_04285 3def9a341ee5b5d46a9d4ea792eda87a 407 Gene3D G3DSA:3.90.1860.10 15 407 7.3E-113 T 13-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 BEN78_04285 3def9a341ee5b5d46a9d4ea792eda87a 407 SUPERFAMILY SSF103365 18 407 3.27E-129 T 13-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 BEN78_04285 3def9a341ee5b5d46a9d4ea792eda87a 407 Pfam PF01139 tRNA-splicing ligase RtcB 35 407 8.2E-127 T 13-10-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 BEN78_07990 dddb148aeadc4adb9f82846240c948d1 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 103 111 1.8E-20 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN78_07990 dddb148aeadc4adb9f82846240c948d1 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 58 68 1.8E-20 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN78_07990 dddb148aeadc4adb9f82846240c948d1 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 256 274 1.8E-20 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN78_07990 dddb148aeadc4adb9f82846240c948d1 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 141 165 1.8E-20 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN78_07990 dddb148aeadc4adb9f82846240c948d1 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 1.8E-20 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN78_07990 dddb148aeadc4adb9f82846240c948d1 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 126 138 1.8E-20 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN78_07990 dddb148aeadc4adb9f82846240c948d1 310 Gene3D G3DSA:3.50.50.60 116 225 9.3E-69 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_07990 dddb148aeadc4adb9f82846240c948d1 310 SUPERFAMILY SSF51905 4 292 5.94E-35 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_07990 dddb148aeadc4adb9f82846240c948d1 310 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 246 268 5.2E-18 T 13-10-2018 BEN78_07990 dddb148aeadc4adb9f82846240c948d1 310 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 5.2E-18 T 13-10-2018 BEN78_07990 dddb148aeadc4adb9f82846240c948d1 310 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 5.2E-18 T 13-10-2018 BEN78_07990 dddb148aeadc4adb9f82846240c948d1 310 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 281 1.4E-24 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BEN78_07990 dddb148aeadc4adb9f82846240c948d1 310 Gene3D G3DSA:3.50.50.60 6 287 9.3E-69 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_12960 dc799746facb25baef0eb270e5976533 168 TIGRFAM TIGR04274 hypoxanDNAglyco: DNA-deoxyinosine glycosylase 8 161 1.0E-43 T 13-10-2018 IPR026353 Hypoxanthine-DNA glycosylase BEN78_12960 dc799746facb25baef0eb270e5976533 168 SMART SM00987 10 165 2.4E-7 T 13-10-2018 BEN78_12960 dc799746facb25baef0eb270e5976533 168 SMART SM00986 10 165 2.4E-7 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BEN78_12960 dc799746facb25baef0eb270e5976533 168 Gene3D G3DSA:3.40.470.10 5 167 2.1E-47 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BEN78_12960 dc799746facb25baef0eb270e5976533 168 SUPERFAMILY SSF52141 9 162 3.14E-31 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BEN78_13130 6af928342c0e75b28bd2e5a112041a05 214 SUPERFAMILY SSF53335 76 170 2.44E-12 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_13130 6af928342c0e75b28bd2e5a112041a05 214 Gene3D G3DSA:3.40.50.150 68 196 7.1E-10 T 13-10-2018 BEN78_13130 6af928342c0e75b28bd2e5a112041a05 214 Pfam PF08241 Methyltransferase domain 78 118 1.8E-4 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 BEN78_02155 5b35564081bb421ef5627ee0fb786f7f 144 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 5 140 2.9E-56 T 13-10-2018 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 BEN78_02155 5b35564081bb421ef5627ee0fb786f7f 144 Pfam PF02566 OsmC-like protein 42 138 2.0E-20 T 13-10-2018 IPR003718 OsmC/Ohr family BEN78_02155 5b35564081bb421ef5627ee0fb786f7f 144 SUPERFAMILY SSF82784 2 133 6.54E-35 T 13-10-2018 IPR036102 OsmC/Ohr superfamily BEN78_02155 5b35564081bb421ef5627ee0fb786f7f 144 Gene3D G3DSA:3.30.300.20 1 141 1.1E-40 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta BEN78_13935 c0c6e4d5443c2fbc9b5ba728475e6b3b 380 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 13-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 BEN78_13935 c0c6e4d5443c2fbc9b5ba728475e6b3b 380 Pfam PF01070 FMN-dependent dehydrogenase 13 375 2.0E-128 T 13-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 BEN78_13935 c0c6e4d5443c2fbc9b5ba728475e6b3b 380 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 380 74.091 T 13-10-2018 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 BEN78_13935 c0c6e4d5443c2fbc9b5ba728475e6b3b 380 PIRSF PIRSF000138 2 379 1.4E-123 T 13-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 BEN78_13935 c0c6e4d5443c2fbc9b5ba728475e6b3b 380 Gene3D G3DSA:3.20.20.70 3 378 2.2E-127 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_13935 c0c6e4d5443c2fbc9b5ba728475e6b3b 380 SUPERFAMILY SSF51395 6 376 8.55E-97 T 13-10-2018 BEN78_07050 5d205b7404486ca22beb3fe50129268b 469 SUPERFAMILY SSF75304 3 450 1.7E-103 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 BEN78_07050 5d205b7404486ca22beb3fe50129268b 469 Pfam PF01425 Amidase 22 441 4.4E-84 T 13-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 BEN78_07050 5d205b7404486ca22beb3fe50129268b 469 Gene3D G3DSA:3.90.1300.10 3 468 3.2E-115 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 BEN78_07050 5d205b7404486ca22beb3fe50129268b 469 ProSitePatterns PS00571 Amidases signature. 148 179 - T 13-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 BEN78_10605 45e066ade073e5d18824831c977ca280 362 SUPERFAMILY SSF51735 16 183 2.27E-20 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_10605 45e066ade073e5d18824831c977ca280 362 SUPERFAMILY SSF55347 161 344 5.49E-37 T 13-10-2018 BEN78_10605 45e066ade073e5d18824831c977ca280 362 Pfam PF00742 Homoserine dehydrogenase 161 357 1.5E-41 T 13-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 BEN78_10605 45e066ade073e5d18824831c977ca280 362 Gene3D G3DSA:3.30.360.10 172 342 1.1E-88 T 13-10-2018 BEN78_10605 45e066ade073e5d18824831c977ca280 362 Gene3D G3DSA:3.40.50.720 20 359 1.1E-88 T 13-10-2018 BEN78_10605 45e066ade073e5d18824831c977ca280 362 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 24 141 1.7E-8 T 13-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 BEN78_10605 45e066ade073e5d18824831c977ca280 362 PIRSF PIRSF036497 15 362 5.1E-69 T 13-10-2018 IPR022697 Homoserine dehydrogenase lacking ACT domain GO:0004412 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 BEN78_10605 45e066ade073e5d18824831c977ca280 362 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 207 229 - T 13-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 BEN78_09305 46c5391baca7721e6977da1548bf7b7d 1312 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 4 1310 0.0 T 13-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BEN78_09305 46c5391baca7721e6977da1548bf7b7d 1312 Gene3D G3DSA:3.30.1330.10 625 801 5.4E-23 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BEN78_09305 46c5391baca7721e6977da1548bf7b7d 1312 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1312 20.023 T 13-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BEN78_09305 46c5391baca7721e6977da1548bf7b7d 1312 SUPERFAMILY SSF82697 1 149 3.45E-29 T 13-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BEN78_09305 46c5391baca7721e6977da1548bf7b7d 1312 SUPERFAMILY SSF109736 160 213 6.02E-17 T 13-10-2018 BEN78_09305 46c5391baca7721e6977da1548bf7b7d 1312 SUPERFAMILY SSF55326 624 835 1.73E-62 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BEN78_09305 46c5391baca7721e6977da1548bf7b7d 1312 Pfam PF02769 AIR synthase related protein, C-terminal domain 843 989 6.5E-10 T 13-10-2018 IPR010918 PurM-like, C-terminal domain BEN78_09305 46c5391baca7721e6977da1548bf7b7d 1312 Pfam PF02769 AIR synthase related protein, C-terminal domain 424 581 2.5E-32 T 13-10-2018 IPR010918 PurM-like, C-terminal domain BEN78_09305 46c5391baca7721e6977da1548bf7b7d 1312 SMART SM01211 1060 1311 4.5E-137 T 13-10-2018 BEN78_09305 46c5391baca7721e6977da1548bf7b7d 1312 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1060 1309 5.4E-98 T 13-10-2018 BEN78_09305 46c5391baca7721e6977da1548bf7b7d 1312 SUPERFAMILY SSF56042 423 659 1.26E-53 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BEN78_09305 46c5391baca7721e6977da1548bf7b7d 1312 SUPERFAMILY SSF52317 1057 1309 6.77E-89 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN78_09305 46c5391baca7721e6977da1548bf7b7d 1312 SUPERFAMILY SSF55326 214 414 1.26E-50 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BEN78_09305 46c5391baca7721e6977da1548bf7b7d 1312 SUPERFAMILY SSF56042 841 1050 6.28E-51 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BEN78_09305 46c5391baca7721e6977da1548bf7b7d 1312 Gene3D G3DSA:1.10.8.750 149 206 3.0E-18 T 13-10-2018 BEN78_09305 46c5391baca7721e6977da1548bf7b7d 1312 Gene3D G3DSA:3.30.1330.10 207 412 3.3E-39 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BEN78_09305 46c5391baca7721e6977da1548bf7b7d 1312 Gene3D G3DSA:3.40.50.880 1006 1312 3.7E-120 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN78_09305 46c5391baca7721e6977da1548bf7b7d 1312 Gene3D G3DSA:3.90.650.10 828 1005 6.0E-32 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BEN78_09305 46c5391baca7721e6977da1548bf7b7d 1312 Gene3D G3DSA:3.90.650.10 413 588 6.1E-54 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BEN78_14240 63044fc230f7df8e02363d1f3fd5f5d0 158 Gene3D G3DSA:1.10.287.180 1 74 3.6E-31 T 13-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 BEN78_14240 63044fc230f7df8e02363d1f3fd5f5d0 158 SUPERFAMILY SSF54534 82 156 6.93E-22 T 13-10-2018 BEN78_14240 63044fc230f7df8e02363d1f3fd5f5d0 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 2.8E-26 T 13-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 BEN78_14240 63044fc230f7df8e02363d1f3fd5f5d0 158 PIRSF PIRSF006092 1 157 6.3E-51 T 13-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 BEN78_14240 63044fc230f7df8e02363d1f3fd5f5d0 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 73 6.5E-31 T 13-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 BEN78_14240 63044fc230f7df8e02363d1f3fd5f5d0 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 1 155 32.891 T 13-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 BEN78_14240 63044fc230f7df8e02363d1f3fd5f5d0 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 4 155 4.0E-58 T 13-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 BEN78_14240 63044fc230f7df8e02363d1f3fd5f5d0 158 Gene3D G3DSA:3.10.50.30 75 157 6.4E-28 T 13-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 BEN78_14240 63044fc230f7df8e02363d1f3fd5f5d0 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 16 47 - T 13-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 BEN78_14240 63044fc230f7df8e02363d1f3fd5f5d0 158 SUPERFAMILY SSF46557 4 76 6.93E-28 T 13-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 BEN78_04560 525635d02bc540d372e3e43ee4712cf1 339 Gene3D G3DSA:3.40.50.1820 60 310 3.0E-56 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_04560 525635d02bc540d372e3e43ee4712cf1 339 Pfam PF07859 alpha/beta hydrolase fold 81 280 4.9E-15 T 13-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 BEN78_04560 525635d02bc540d372e3e43ee4712cf1 339 SUPERFAMILY SSF53474 66 304 2.52E-33 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_03415 6f1fb7b88c3ade146d4fac63b7315bd1 229 Gene3D G3DSA:1.10.10.10 158 226 7.3E-34 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_03415 6f1fb7b88c3ade146d4fac63b7315bd1 229 Pfam PF00027 Cyclic nucleotide-binding domain 35 123 6.6E-21 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain BEN78_03415 6f1fb7b88c3ade146d4fac63b7315bd1 229 Gene3D G3DSA:2.60.120.10 24 157 4.9E-49 T 13-10-2018 IPR014710 RmlC-like jelly roll fold BEN78_03415 6f1fb7b88c3ade146d4fac63b7315bd1 229 ProSitePatterns PS00042 Crp-type HTH domain signature. 187 210 - T 13-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 BEN78_03415 6f1fb7b88c3ade146d4fac63b7315bd1 229 SMART SM00419 179 227 5.9E-11 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BEN78_03415 6f1fb7b88c3ade146d4fac63b7315bd1 229 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 201 216 2.1E-5 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BEN78_03415 6f1fb7b88c3ade146d4fac63b7315bd1 229 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 185 201 2.1E-5 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BEN78_03415 6f1fb7b88c3ade146d4fac63b7315bd1 229 SUPERFAMILY SSF51206 23 151 2.23E-26 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like BEN78_03415 6f1fb7b88c3ade146d4fac63b7315bd1 229 SMART SM00100 17 136 9.1E-20 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain BEN78_03415 6f1fb7b88c3ade146d4fac63b7315bd1 229 Pfam PF00325 Bacterial regulatory proteins, crp family 185 214 8.3E-13 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BEN78_03415 6f1fb7b88c3ade146d4fac63b7315bd1 229 SUPERFAMILY SSF46785 158 226 1.79E-12 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_00105 6c647fd3eef928e51bcc4ec9a2c536de 116 SUPERFAMILY SSF101386 3 115 9.3E-39 T 13-10-2018 BEN78_00105 6c647fd3eef928e51bcc4ec9a2c536de 116 PIRSF PIRSF029826 1 116 6.6E-46 T 13-10-2018 IPR025984 dCTP pyrophosphatase 1 GO:0009143|GO:0047429 KEGG: 00240+3.6.1.12|Reactome: R-HSA-499943 BEN78_00105 6c647fd3eef928e51bcc4ec9a2c536de 116 Pfam PF12643 MazG-like family 33 115 1.8E-18 T 13-10-2018 IPR025984 dCTP pyrophosphatase 1 GO:0009143|GO:0047429 KEGG: 00240+3.6.1.12|Reactome: R-HSA-499943 BEN78_00105 6c647fd3eef928e51bcc4ec9a2c536de 116 Gene3D G3DSA:1.10.287.1080 1 108 6.4E-35 T 13-10-2018 BEN78_12900 bff98e68fc699b71e79372c210a8fded 220 ProSitePatterns PS00018 EF-hand calcium-binding domain. 174 186 - T 13-10-2018 IPR018247 EF-Hand 1, calcium-binding site BEN78_12900 bff98e68fc699b71e79372c210a8fded 220 Gene3D G3DSA:1.10.238.10 159 219 1.4E-14 T 13-10-2018 BEN78_12900 bff98e68fc699b71e79372c210a8fded 220 Pfam PF13202 EF hand 200 215 6.5E-4 T 13-10-2018 IPR002048 EF-hand domain GO:0005509 BEN78_12900 bff98e68fc699b71e79372c210a8fded 220 Pfam PF13202 EF hand 56 73 3.5E-4 T 13-10-2018 IPR002048 EF-hand domain GO:0005509 BEN78_12900 bff98e68fc699b71e79372c210a8fded 220 ProSitePatterns PS00018 EF-hand calcium-binding domain. 201 213 - T 13-10-2018 IPR018247 EF-Hand 1, calcium-binding site BEN78_12900 bff98e68fc699b71e79372c210a8fded 220 Pfam PF13499 EF-hand domain pair 131 187 2.9E-9 T 13-10-2018 IPR002048 EF-hand domain GO:0005509 BEN78_12900 bff98e68fc699b71e79372c210a8fded 220 ProSitePatterns PS00018 EF-hand calcium-binding domain. 135 147 - T 13-10-2018 IPR018247 EF-Hand 1, calcium-binding site BEN78_12900 bff98e68fc699b71e79372c210a8fded 220 SUPERFAMILY SSF47473 59 215 1.59E-15 T 13-10-2018 IPR011992 EF-hand domain pair BEN78_12900 bff98e68fc699b71e79372c210a8fded 220 SMART SM00054 126 154 2.2 T 13-10-2018 IPR002048 EF-hand domain GO:0005509 BEN78_12900 bff98e68fc699b71e79372c210a8fded 220 SMART SM00054 165 193 0.029 T 13-10-2018 IPR002048 EF-hand domain GO:0005509 BEN78_12900 bff98e68fc699b71e79372c210a8fded 220 SMART SM00054 53 81 96.0 T 13-10-2018 IPR002048 EF-hand domain GO:0005509 BEN78_12900 bff98e68fc699b71e79372c210a8fded 220 SMART SM00054 194 220 97.0 T 13-10-2018 IPR002048 EF-hand domain GO:0005509 BEN78_01405 f6ca6afe6befa3029cfcfe6083f2efa0 85 SUPERFAMILY SSF46785 8 81 4.93E-9 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_01405 f6ca6afe6befa3029cfcfe6083f2efa0 85 Gene3D G3DSA:1.10.10.10 2 83 4.2E-9 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_16675 6df0f088715b4c7ebbfd2774aba228fa 414 Pfam PF07690 Major Facilitator Superfamily 26 371 1.1E-16 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN78_16675 6df0f088715b4c7ebbfd2774aba228fa 414 SUPERFAMILY SSF103473 7 406 3.92E-39 T 13-10-2018 IPR036259 MFS transporter superfamily BEN78_16675 6df0f088715b4c7ebbfd2774aba228fa 414 Gene3D G3DSA:1.20.1250.20 16 199 2.3E-12 T 13-10-2018 BEN78_16675 6df0f088715b4c7ebbfd2774aba228fa 414 Gene3D G3DSA:1.20.1250.20 223 408 9.1E-14 T 13-10-2018 BEN78_10120 825141ba672f3565eeeedd8959618d50 183 Gene3D G3DSA:3.90.79.10 14 181 1.8E-42 T 13-10-2018 BEN78_10120 825141ba672f3565eeeedd8959618d50 183 Pfam PF00293 NUDIX domain 44 160 3.9E-14 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BEN78_10120 825141ba672f3565eeeedd8959618d50 183 SUPERFAMILY SSF55811 8 178 2.03E-34 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BEN78_10120 825141ba672f3565eeeedd8959618d50 183 ProSitePatterns PS00893 Nudix box signature. 78 99 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BEN78_09345 7412a063e4873ddfb5a1ba9a5d45d895 405 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 166 194 - T 13-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 BEN78_09345 7412a063e4873ddfb5a1ba9a5d45d895 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 6.8E-22 T 13-10-2018 IPR003004 GspF/PilC family BEN78_09345 7412a063e4873ddfb5a1ba9a5d45d895 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 6.8E-22 T 13-10-2018 IPR003004 GspF/PilC family BEN78_09345 7412a063e4873ddfb5a1ba9a5d45d895 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 6.8E-22 T 13-10-2018 IPR003004 GspF/PilC family BEN78_09345 7412a063e4873ddfb5a1ba9a5d45d895 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 6.8E-22 T 13-10-2018 IPR003004 GspF/PilC family BEN78_09345 7412a063e4873ddfb5a1ba9a5d45d895 405 Gene3D G3DSA:1.20.81.30 58 173 3.7E-28 T 13-10-2018 BEN78_09345 7412a063e4873ddfb5a1ba9a5d45d895 405 Gene3D G3DSA:1.20.81.30 261 373 1.5E-23 T 13-10-2018 BEN78_09345 7412a063e4873ddfb5a1ba9a5d45d895 405 Pfam PF00482 Type II secretion system (T2SS), protein F 71 194 3.3E-31 T 13-10-2018 IPR018076 Type II secretion system F domain BEN78_09345 7412a063e4873ddfb5a1ba9a5d45d895 405 Pfam PF00482 Type II secretion system (T2SS), protein F 275 396 3.7E-25 T 13-10-2018 IPR018076 Type II secretion system F domain BEN78_16095 c57c6c95c9526871922dc17230e1114b 510 Gene3D G3DSA:2.60.40.10 395 509 2.3E-22 T 13-10-2018 IPR013783 Immunoglobulin-like fold BEN78_16095 c57c6c95c9526871922dc17230e1114b 510 SUPERFAMILY SSF54862 92 396 9.63E-31 T 13-10-2018 BEN78_16095 c57c6c95c9526871922dc17230e1114b 510 Pfam PF13746 4Fe-4S dicluster domain 206 246 1.5E-12 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BEN78_16095 c57c6c95c9526871922dc17230e1114b 510 Pfam PF13746 4Fe-4S dicluster domain 307 364 2.6E-28 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BEN78_16095 c57c6c95c9526871922dc17230e1114b 510 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 312 323 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BEN78_16095 c57c6c95c9526871922dc17230e1114b 510 Pfam PF12801 4Fe-4S binding domain 82 122 8.9E-11 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BEN78_16095 c57c6c95c9526871922dc17230e1114b 510 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 395 509 8.8E-25 T 13-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain BEN78_02045 e5910a9593f68b75c6301c97c8e0201e 337 Gene3D G3DSA:1.20.58.340 146 258 6.5E-32 T 13-10-2018 BEN78_02045 e5910a9593f68b75c6301c97c8e0201e 337 Pfam PF01544 CorA-like Mg2+ transporter protein 47 333 2.4E-63 T 13-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 BEN78_02045 e5910a9593f68b75c6301c97c8e0201e 337 SUPERFAMILY SSF143865 11 269 1.7E-66 T 13-10-2018 BEN78_02045 e5910a9593f68b75c6301c97c8e0201e 337 SUPERFAMILY SSF144083 273 334 4.05E-16 T 13-10-2018 BEN78_02045 e5910a9593f68b75c6301c97c8e0201e 337 Gene3D G3DSA:1.20.58.340 261 337 6.2E-19 T 13-10-2018 BEN78_02045 e5910a9593f68b75c6301c97c8e0201e 337 Gene3D G3DSA:3.30.460.20 4 145 2.8E-23 T 13-10-2018 BEN78_03710 f4cd3403976c1fd5a15fcd438e0ecc0e 835 Pfam PF00128 Alpha amylase, catalytic domain 24 98 1.6E-13 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BEN78_03710 f4cd3403976c1fd5a15fcd438e0ecc0e 835 SMART SM00642 11 430 7.0E-7 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BEN78_03710 f4cd3403976c1fd5a15fcd438e0ecc0e 835 SUPERFAMILY SSF51445 6 736 1.07E-125 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily BEN78_03710 f4cd3403976c1fd5a15fcd438e0ecc0e 835 TIGRFAM TIGR02401 trehalose_TreY: malto-oligosyltrehalose synthase 5 832 7.0E-273 T 13-10-2018 IPR012767 Maltooligosyl trehalose synthase KEGG: 00500+5.4.99.15|MetaCyc: PWY-2661 BEN78_12275 a6e43dd6da7bcc93667ce8dd7e22a67d 324 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 24 317 1.4E-89 T 13-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 BEN78_12275 a6e43dd6da7bcc93667ce8dd7e22a67d 324 SUPERFAMILY SSF161098 36 311 5.76E-34 T 13-10-2018 IPR035906 MetI-like superfamily BEN78_12275 a6e43dd6da7bcc93667ce8dd7e22a67d 324 Gene3D G3DSA:1.10.3720.10 74 321 5.5E-34 T 13-10-2018 IPR035906 MetI-like superfamily BEN78_12275 a6e43dd6da7bcc93667ce8dd7e22a67d 324 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 312 1.9E-14 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN78_09745 bbc7465e2d534534f8220f3948f0ed89 104 Pfam PF01845 CcdB protein 3 103 5.4E-28 T 13-10-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 BEN78_09745 bbc7465e2d534534f8220f3948f0ed89 104 ProDom PD012578 PLASMID TOXIN CCDB CYTOTOXIC LETB POST-SEGREGATION SYSTEM CCDB-LIKE GYRASE FUSED-CCDB 19 103 6.0E-10 T 13-10-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 BEN78_09745 bbc7465e2d534534f8220f3948f0ed89 104 SUPERFAMILY SSF50118 3 104 9.15E-23 T 13-10-2018 BEN78_09745 bbc7465e2d534534f8220f3948f0ed89 104 Gene3D G3DSA:2.30.30.110 1 104 3.7E-31 T 13-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor BEN78_16570 e0e009260c2cd7cca094cd51aba0a95a 181 SUPERFAMILY SSF110087 43 171 1.83E-43 T 13-10-2018 IPR036182 Copper chaperone PCuAC superfamily BEN78_16570 e0e009260c2cd7cca094cd51aba0a95a 181 Pfam PF04314 Copper chaperone PCu(A)C 55 160 5.1E-35 T 13-10-2018 IPR007410 Copper chaperone PCuAC BEN78_16570 e0e009260c2cd7cca094cd51aba0a95a 181 Gene3D G3DSA:2.60.40.1890 58 170 8.9E-36 T 13-10-2018 IPR036182 Copper chaperone PCuAC superfamily BEN78_11695 b01e61a3c4bb72a7c24db5b977cc4273 163 Pfam PF12019 Type II transport protein GspH 30 147 8.1E-16 T 13-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 BEN78_11695 b01e61a3c4bb72a7c24db5b977cc4273 163 SUPERFAMILY SSF54523 1 123 3.69E-10 T 13-10-2018 BEN78_11695 b01e61a3c4bb72a7c24db5b977cc4273 163 Gene3D G3DSA:3.55.40.10 19 161 3.4E-8 T 13-10-2018 BEN78_14490 e583479640d74f17d5350befae8cf35a 120 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 20 87 2.9E-19 T 13-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 BEN78_14490 e583479640d74f17d5350befae8cf35a 120 Pfam PF04347 Flagellar biosynthesis protein, FliO 32 116 2.7E-18 T 13-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 BEN78_09870 6e50bca00300a4a615362e8e22dfe43a 100 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 1.2E-20 T 13-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN78_09870 6e50bca00300a4a615362e8e22dfe43a 100 SMART SM01409 8 62 1.1E-16 T 13-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 BEN78_09870 6e50bca00300a4a615362e8e22dfe43a 100 Pfam PF01192 RNA polymerase Rpb6 8 60 4.0E-17 T 13-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 BEN78_09870 6e50bca00300a4a615362e8e22dfe43a 100 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 63 17.823 T 13-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN78_09870 6e50bca00300a4a615362e8e22dfe43a 100 Gene3D G3DSA:3.90.940.10 1 94 2.6E-25 T 13-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 BEN78_09870 6e50bca00300a4a615362e8e22dfe43a 100 SUPERFAMILY SSF63562 1 75 3.27E-23 T 13-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 BEN78_04990 789e1b3c775183184d83558d76e612c5 360 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 15 355 4.7E-119 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BEN78_04990 789e1b3c775183184d83558d76e612c5 360 Gene3D G3DSA:3.40.640.10 1 242 1.4E-92 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN78_04990 789e1b3c775183184d83558d76e612c5 360 PIRSF PIRSF000390 1 359 1.3E-103 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BEN78_04990 789e1b3c775183184d83558d76e612c5 360 Gene3D G3DSA:3.90.1150.10 244 358 9.4E-32 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN78_04990 789e1b3c775183184d83558d76e612c5 360 SUPERFAMILY SSF53383 16 353 2.82E-109 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_00300 ad80bdd4ee58362c82309e8bb70536b4 262 SMART SM00257 59 103 2.8E-10 T 13-10-2018 IPR018392 LysM domain BEN78_00300 ad80bdd4ee58362c82309e8bb70536b4 262 SUPERFAMILY SSF51261 61 259 8.89E-45 T 13-10-2018 IPR011055 Duplicated hybrid motif BEN78_00300 ad80bdd4ee58362c82309e8bb70536b4 262 Pfam PF01476 LysM domain 61 101 8.1E-12 T 13-10-2018 IPR018392 LysM domain BEN78_00300 ad80bdd4ee58362c82309e8bb70536b4 262 Gene3D G3DSA:3.10.350.10 59 101 6.8E-13 T 13-10-2018 IPR036779 LysM domain superfamily BEN78_00300 ad80bdd4ee58362c82309e8bb70536b4 262 Pfam PF01551 Peptidase family M23 162 255 2.0E-28 T 13-10-2018 IPR016047 Peptidase M23 BEN78_00300 ad80bdd4ee58362c82309e8bb70536b4 262 Gene3D G3DSA:2.70.70.10 109 261 3.8E-34 T 13-10-2018 IPR011055 Duplicated hybrid motif BEN78_02530 d550e1f07490cc6559b81c74cedb3c2f 335 ProSitePatterns PS00158 Fructose-bisphosphate aldolase class-I active site. 211 221 - T 13-10-2018 IPR029768 Fructose-bisphosphate aldolase class-I active site KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_02530 d550e1f07490cc6559b81c74cedb3c2f 335 Pfam PF00274 Fructose-bisphosphate aldolase class-I 6 333 6.0E-136 T 13-10-2018 IPR000741 Fructose-bisphosphate aldolase, class-I GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_02530 d550e1f07490cc6559b81c74cedb3c2f 335 Gene3D G3DSA:3.20.20.70 2 335 1.2E-150 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_02530 d550e1f07490cc6559b81c74cedb3c2f 335 SUPERFAMILY SSF51569 4 335 5.13E-131 T 13-10-2018 BEN78_13505 851bd66b03d432dab102f316d6df734d 184 SUPERFAMILY SSF52218 3 183 7.21E-36 T 13-10-2018 IPR029039 Flavoprotein-like superfamily BEN78_13505 851bd66b03d432dab102f316d6df734d 184 Pfam PF03358 NADPH-dependent FMN reductase 46 120 2.1E-6 T 13-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 BEN78_13505 851bd66b03d432dab102f316d6df734d 184 Gene3D G3DSA:3.40.50.360 2 184 4.6E-50 T 13-10-2018 IPR029039 Flavoprotein-like superfamily BEN78_16000 ed4f9ce21c442446d8c45935085f98a6 458 Gene3D G3DSA:2.30.40.10 41 89 6.9E-12 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BEN78_16000 ed4f9ce21c442446d8c45935085f98a6 458 SUPERFAMILY SSF51338 35 432 8.03E-17 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BEN78_16000 ed4f9ce21c442446d8c45935085f98a6 458 Pfam PF01979 Amidohydrolase family 86 438 4.2E-17 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BEN78_16000 ed4f9ce21c442446d8c45935085f98a6 458 SUPERFAMILY SSF51556 89 403 8.17E-41 T 13-10-2018 IPR032466 Metal-dependent hydrolase BEN78_16000 ed4f9ce21c442446d8c45935085f98a6 458 Gene3D G3DSA:3.20.20.140 98 398 2.1E-48 T 13-10-2018 BEN78_02925 c85f22e4ec8bc09be0fd622d84cc5e9b 456 TIGRFAM TIGR02400 trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 3 454 5.2E-174 T 13-10-2018 IPR012766 Alpha,alpha-trehalose-phosphate synthase GO:0003825|GO:0005992 KEGG: 00500+2.4.1.15 BEN78_02925 c85f22e4ec8bc09be0fd622d84cc5e9b 456 SUPERFAMILY SSF53756 2 454 2.45E-142 T 13-10-2018 BEN78_02925 c85f22e4ec8bc09be0fd622d84cc5e9b 456 Pfam PF00982 Glycosyltransferase family 20 16 453 3.8E-130 T 13-10-2018 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 KEGG: 00500+2.4.1.15 BEN78_02925 c85f22e4ec8bc09be0fd622d84cc5e9b 456 Gene3D G3DSA:3.40.50.2000 230 438 2.7E-159 T 13-10-2018 BEN78_02925 c85f22e4ec8bc09be0fd622d84cc5e9b 456 Gene3D G3DSA:3.40.50.2000 19 449 2.7E-159 T 13-10-2018 BEN78_05720 76e21d574f0c67fb428eda034de9b61f 291 SMART SM00850 193 290 4.0E-34 T 13-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 BEN78_05720 76e21d574f0c67fb428eda034de9b61f 291 Gene3D G3DSA:2.40.50.40 187 252 1.8E-10 T 13-10-2018 BEN78_05720 76e21d574f0c67fb428eda034de9b61f 291 PIRSF PIRSF031767 11 291 4.5E-85 T 13-10-2018 IPR012379 LytTR MHYE transcriptional regulator, putative BEN78_05720 76e21d574f0c67fb428eda034de9b61f 291 Pfam PF04397 LytTr DNA-binding domain 196 288 1.4E-24 T 13-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 BEN78_10930 82ce398d3c5b266aa9ae2ee83f2ce4f8 234 Gene3D G3DSA:1.10.8.60 166 231 3.3E-23 T 13-10-2018 BEN78_10930 82ce398d3c5b266aa9ae2ee83f2ce4f8 234 Pfam PF00308 Bacterial dnaA protein 46 211 6.1E-13 T 13-10-2018 IPR013317 Chromosomal replication initiator protein DnaA BEN78_10930 82ce398d3c5b266aa9ae2ee83f2ce4f8 234 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 7 231 1.2E-69 T 13-10-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 BEN78_10930 82ce398d3c5b266aa9ae2ee83f2ce4f8 234 Gene3D G3DSA:3.40.50.300 2 163 4.4E-29 T 13-10-2018 BEN78_10930 82ce398d3c5b266aa9ae2ee83f2ce4f8 234 SMART SM00382 42 163 0.0044 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_10930 82ce398d3c5b266aa9ae2ee83f2ce4f8 234 SUPERFAMILY SSF52540 15 211 4.76E-26 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_05215 6ddd84da35c47ed36b892fb2be2cc28b 185 Gene3D G3DSA:3.40.50.300 12 169 1.3E-9 T 13-10-2018 BEN78_05215 6ddd84da35c47ed36b892fb2be2cc28b 185 SUPERFAMILY SSF52540 12 110 4.19E-14 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_13840 72f869fb166e359a20a609b8abfab037 264 Pfam PF00717 Peptidase S24-like 70 150 3.3E-22 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C BEN78_13840 72f869fb166e359a20a609b8abfab037 264 ProSitePatterns PS00760 Signal peptidases I lysine active site. 130 142 - T 13-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 BEN78_13840 72f869fb166e359a20a609b8abfab037 264 ProSitePatterns PS00761 Signal peptidases I signature 3. 211 224 - T 13-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 BEN78_13840 72f869fb166e359a20a609b8abfab037 264 ProSitePatterns PS00501 Signal peptidases I serine active site. 73 80 - T 13-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 BEN78_13840 72f869fb166e359a20a609b8abfab037 264 Pfam PF10502 Signal peptidase, peptidase S26 195 243 1.3E-4 T 13-10-2018 IPR019533 Peptidase S26 BEN78_13840 72f869fb166e359a20a609b8abfab037 264 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 49 245 1.6E-48 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BEN78_13840 72f869fb166e359a20a609b8abfab037 264 Gene3D G3DSA:2.10.109.10 62 245 1.5E-64 T 13-10-2018 BEN78_13840 72f869fb166e359a20a609b8abfab037 264 Gene3D G3DSA:2.170.230.10 139 205 1.5E-64 T 13-10-2018 BEN78_13840 72f869fb166e359a20a609b8abfab037 264 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 64 80 5.6E-24 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BEN78_13840 72f869fb166e359a20a609b8abfab037 264 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 206 225 5.6E-24 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BEN78_13840 72f869fb166e359a20a609b8abfab037 264 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 128 140 5.6E-24 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BEN78_13840 72f869fb166e359a20a609b8abfab037 264 SUPERFAMILY SSF51306 62 261 5.23E-66 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily BEN78_12935 f103ce8914bdc069347d4835e37ac689 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 7.9E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_12935 f103ce8914bdc069347d4835e37ac689 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 7.9E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_12935 f103ce8914bdc069347d4835e37ac689 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 7.9E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_12935 f103ce8914bdc069347d4835e37ac689 276 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BEN78_12935 f103ce8914bdc069347d4835e37ac689 276 SUPERFAMILY SSF51735 4 246 3.82E-63 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_12935 f103ce8914bdc069347d4835e37ac689 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 5.4E-27 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_12935 f103ce8914bdc069347d4835e37ac689 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 5.4E-27 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_12935 f103ce8914bdc069347d4835e37ac689 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 5.4E-27 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_12935 f103ce8914bdc069347d4835e37ac689 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 5.4E-27 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_12935 f103ce8914bdc069347d4835e37ac689 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 5.4E-27 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_12935 f103ce8914bdc069347d4835e37ac689 276 Gene3D G3DSA:3.40.50.720 2 276 7.5E-76 T 13-10-2018 BEN78_12935 f103ce8914bdc069347d4835e37ac689 276 Pfam PF00106 short chain dehydrogenase 5 187 1.2E-46 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_07165 d11b227fa583af4f9719726e237b9492 255 Gene3D G3DSA:3.40.50.1820 1 253 3.1E-59 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_07165 d11b227fa583af4f9719726e237b9492 255 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 8 249 2.1E-80 T 13-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 BEN78_07165 d11b227fa583af4f9719726e237b9492 255 Pfam PF12697 Alpha/beta hydrolase family 12 244 4.4E-19 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN78_07165 d11b227fa583af4f9719726e237b9492 255 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 1 251 38.735 T 13-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 BEN78_07165 d11b227fa583af4f9719726e237b9492 255 SUPERFAMILY SSF53474 1 251 4.61E-47 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_02320 cc2ba28d1253632814d5be488fe0ca1a 438 SUPERFAMILY SSF53613 5 314 4.68E-61 T 13-10-2018 IPR029056 Ribokinase-like BEN78_02320 cc2ba28d1253632814d5be488fe0ca1a 438 Hamap MF_01987 Ribokinase [rbsK]. 4 320 22.91 T 13-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 BEN78_02320 cc2ba28d1253632814d5be488fe0ca1a 438 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 263 276 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 BEN78_02320 cc2ba28d1253632814d5be488fe0ca1a 438 Gene3D G3DSA:3.40.1190.20 1 325 1.7E-82 T 13-10-2018 IPR029056 Ribokinase-like BEN78_02320 cc2ba28d1253632814d5be488fe0ca1a 438 Pfam PF00294 pfkB family carbohydrate kinase 5 313 3.7E-49 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB BEN78_02320 cc2ba28d1253632814d5be488fe0ca1a 438 PRINTS PR00990 Ribokinase signature 104 117 8.4E-20 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 BEN78_02320 cc2ba28d1253632814d5be488fe0ca1a 438 PRINTS PR00990 Ribokinase signature 8 29 8.4E-20 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 BEN78_02320 cc2ba28d1253632814d5be488fe0ca1a 438 PRINTS PR00990 Ribokinase signature 226 237 8.4E-20 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 BEN78_02320 cc2ba28d1253632814d5be488fe0ca1a 438 PRINTS PR00990 Ribokinase signature 173 188 8.4E-20 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 BEN78_06125 37a9f0500bb2a42558e81d13b5d439f1 202 Gene3D G3DSA:3.30.1130.10 65 198 4.6E-53 T 13-10-2018 BEN78_06125 37a9f0500bb2a42558e81d13b5d439f1 202 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 13 196 38.213 T 13-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 BEN78_06125 37a9f0500bb2a42558e81d13b5d439f1 202 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 75 91 - T 13-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 BEN78_06125 37a9f0500bb2a42558e81d13b5d439f1 202 Pfam PF01227 GTP cyclohydrolase I 18 195 1.4E-71 T 13-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 BEN78_06125 37a9f0500bb2a42558e81d13b5d439f1 202 SUPERFAMILY SSF55620 9 196 6.74E-74 T 13-10-2018 BEN78_06125 37a9f0500bb2a42558e81d13b5d439f1 202 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 19 195 1.2E-63 T 13-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 BEN78_06125 37a9f0500bb2a42558e81d13b5d439f1 202 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 123 133 - T 13-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 BEN78_06125 37a9f0500bb2a42558e81d13b5d439f1 202 Gene3D G3DSA:1.10.286.10 1 61 3.5E-20 T 13-10-2018 BEN78_11290 4d4df127a8d13efff6cc6bbfb01346d7 398 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 6 395 4.1E-222 T 13-10-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 BEN78_11290 4d4df127a8d13efff6cc6bbfb01346d7 398 Pfam PF04303 PrpF protein 6 392 1.5E-172 T 13-10-2018 IPR007400 PrpF protein BEN78_11290 4d4df127a8d13efff6cc6bbfb01346d7 398 SUPERFAMILY SSF54506 190 394 1.73E-73 T 13-10-2018 BEN78_11290 4d4df127a8d13efff6cc6bbfb01346d7 398 Gene3D G3DSA:3.10.310.10 11 389 8.1E-144 T 13-10-2018 BEN78_11290 4d4df127a8d13efff6cc6bbfb01346d7 398 SUPERFAMILY SSF54506 2 182 2.83E-68 T 13-10-2018 BEN78_11290 4d4df127a8d13efff6cc6bbfb01346d7 398 Gene3D G3DSA:3.10.310.10 181 375 8.1E-144 T 13-10-2018 BEN78_09990 2774457257943c60524783cc14cda465 457 Gene3D G3DSA:1.10.3860.10 5 449 8.3E-118 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BEN78_09990 2774457257943c60524783cc14cda465 457 Pfam PF00375 Sodium:dicarboxylate symporter family 14 445 3.8E-113 T 13-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BEN78_09990 2774457257943c60524783cc14cda465 457 PRINTS PR00173 Glutamate-aspartate symporter signature 111 136 4.7E-40 T 13-10-2018 BEN78_09990 2774457257943c60524783cc14cda465 457 PRINTS PR00173 Glutamate-aspartate symporter signature 400 420 4.7E-40 T 13-10-2018 BEN78_09990 2774457257943c60524783cc14cda465 457 PRINTS PR00173 Glutamate-aspartate symporter signature 338 364 4.7E-40 T 13-10-2018 BEN78_09990 2774457257943c60524783cc14cda465 457 PRINTS PR00173 Glutamate-aspartate symporter signature 81 101 4.7E-40 T 13-10-2018 BEN78_09990 2774457257943c60524783cc14cda465 457 PRINTS PR00173 Glutamate-aspartate symporter signature 188 210 4.7E-40 T 13-10-2018 BEN78_09990 2774457257943c60524783cc14cda465 457 PRINTS PR00173 Glutamate-aspartate symporter signature 373 392 4.7E-40 T 13-10-2018 BEN78_09990 2774457257943c60524783cc14cda465 457 SUPERFAMILY SSF118215 14 445 1.44E-100 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BEN78_02785 3d151eec000b1040acd61c9a22cdbb99 429 SUPERFAMILY SSF52172 136 267 2.99E-30 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_02785 3d151eec000b1040acd61c9a22cdbb99 429 Pfam PF00990 Diguanylate cyclase, GGDEF domain 268 424 2.3E-43 T 13-10-2018 IPR000160 GGDEF domain BEN78_02785 3d151eec000b1040acd61c9a22cdbb99 429 Gene3D G3DSA:3.30.70.270 263 428 5.5E-55 T 13-10-2018 BEN78_02785 3d151eec000b1040acd61c9a22cdbb99 429 Gene3D G3DSA:3.40.50.2300 132 261 3.7E-27 T 13-10-2018 BEN78_02785 3d151eec000b1040acd61c9a22cdbb99 429 Gene3D G3DSA:3.40.50.2300 13 131 1.2E-7 T 13-10-2018 BEN78_02785 3d151eec000b1040acd61c9a22cdbb99 429 SUPERFAMILY SSF55073 273 427 1.33E-46 T 13-10-2018 IPR029787 Nucleotide cyclase BEN78_02785 3d151eec000b1040acd61c9a22cdbb99 429 SMART SM00267 257 428 9.2E-62 T 13-10-2018 IPR000160 GGDEF domain BEN78_02785 3d151eec000b1040acd61c9a22cdbb99 429 Pfam PF00072 Response regulator receiver domain 140 248 9.1E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_02785 3d151eec000b1040acd61c9a22cdbb99 429 SMART SM00448 137 251 1.3E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_02785 3d151eec000b1040acd61c9a22cdbb99 429 SMART SM00448 15 131 0.075 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_02785 3d151eec000b1040acd61c9a22cdbb99 429 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 264 428 1.2E-46 T 13-10-2018 IPR000160 GGDEF domain BEN78_02785 3d151eec000b1040acd61c9a22cdbb99 429 SUPERFAMILY SSF52172 15 136 1.25E-9 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_03260 26cbbbc5e5f77bbb889a82870091be74 228 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 44 204 1.9E-32 T 13-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component BEN78_03260 26cbbbc5e5f77bbb889a82870091be74 228 SUPERFAMILY SSF159594 43 210 1.6E-42 T 13-10-2018 BEN78_03260 26cbbbc5e5f77bbb889a82870091be74 228 Gene3D G3DSA:3.40.50.10610 34 221 3.1E-60 T 13-10-2018 BEN78_09970 f52a86d914959446d2a9a0765fac11b0 152 Pfam PF14316 Domain of unknown function (DUF4381) 8 142 2.8E-31 T 13-10-2018 IPR025489 Protein of unknown function (DUF4381 BEN78_08725 9c466f15c3e3b9b2ccda21d04807a250 229 Gene3D G3DSA:3.40.50.300 1 229 1.2E-60 T 13-10-2018 BEN78_08725 9c466f15c3e3b9b2ccda21d04807a250 229 SUPERFAMILY SSF52540 3 226 2.54E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_08725 9c466f15c3e3b9b2ccda21d04807a250 229 SMART SM00382 29 216 7.6E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_08725 9c466f15c3e3b9b2ccda21d04807a250 229 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN78_08725 9c466f15c3e3b9b2ccda21d04807a250 229 Pfam PF00005 ABC transporter 20 167 4.7E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_08725 9c466f15c3e3b9b2ccda21d04807a250 229 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 4 215 1.5E-82 T 13-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 BEN78_05045 035cd1b6cbbc578f4563bb7205bb0e82 610 Gene3D G3DSA:3.40.50.10490 448 595 2.5E-140 T 13-10-2018 BEN78_05045 035cd1b6cbbc578f4563bb7205bb0e82 610 Gene3D G3DSA:3.40.50.10490 249 609 2.5E-140 T 13-10-2018 BEN78_05045 035cd1b6cbbc578f4563bb7205bb0e82 610 SUPERFAMILY SSF53697 245 610 3.34E-109 T 13-10-2018 BEN78_05045 035cd1b6cbbc578f4563bb7205bb0e82 610 SUPERFAMILY SSF56235 2 232 1.72E-71 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BEN78_05045 035cd1b6cbbc578f4563bb7205bb0e82 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 39.234 T 13-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 BEN78_05045 035cd1b6cbbc578f4563bb7205bb0e82 610 Pfam PF13522 Glutamine amidotransferase domain 64 192 3.4E-22 T 13-10-2018 BEN78_05045 035cd1b6cbbc578f4563bb7205bb0e82 610 Gene3D G3DSA:3.60.20.10 2 240 7.4E-77 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BEN78_05045 035cd1b6cbbc578f4563bb7205bb0e82 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 5.0E-256 T 13-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 BEN78_05045 035cd1b6cbbc578f4563bb7205bb0e82 610 Pfam PF01380 SIS domain 296 417 7.5E-27 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BEN78_05045 035cd1b6cbbc578f4563bb7205bb0e82 610 Pfam PF01380 SIS domain 464 592 1.3E-26 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BEN78_08150 89134d7d15a1b337aca7ba43f613da2d 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 22.121 T 13-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_08150 89134d7d15a1b337aca7ba43f613da2d 78 SUPERFAMILY SSF143800 2 77 2.55E-31 T 13-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_08150 89134d7d15a1b337aca7ba43f613da2d 78 Pfam PF00830 Ribosomal L28 family 3 62 3.9E-27 T 13-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_08150 89134d7d15a1b337aca7ba43f613da2d 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 2.6E-27 T 13-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_08150 89134d7d15a1b337aca7ba43f613da2d 78 Gene3D G3DSA:2.30.170.40 2 78 6.9E-35 T 13-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_07820 306e88d0ff519a33bf1a0641143bc5e1 88 Pfam PF03692 Putative zinc- or iron-chelating domain 6 61 6.4E-5 T 13-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein BEN78_15110 b4f0ad90f12710133857211769f41ca6 373 Pfam PF07859 alpha/beta hydrolase fold 98 297 8.1E-38 T 13-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 BEN78_15110 b4f0ad90f12710133857211769f41ca6 373 Gene3D G3DSA:3.40.50.1820 38 332 1.7E-59 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_15110 b4f0ad90f12710133857211769f41ca6 373 SUPERFAMILY SSF53474 44 319 5.41E-42 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_10915 42ad1d789dec0decc30bc884a44a5621 358 Gene3D G3DSA:3.90.650.10 183 358 1.0E-61 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BEN78_10915 42ad1d789dec0decc30bc884a44a5621 358 SUPERFAMILY SSF56042 182 354 2.09E-55 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BEN78_10915 42ad1d789dec0decc30bc884a44a5621 358 Pfam PF00586 AIR synthase related protein, N-terminal domain 72 174 4.9E-14 T 13-10-2018 IPR016188 PurM-like, N-terminal domain BEN78_10915 42ad1d789dec0decc30bc884a44a5621 358 Pfam PF02769 AIR synthase related protein, C-terminal domain 187 352 1.0E-36 T 13-10-2018 IPR010918 PurM-like, C-terminal domain BEN78_10915 42ad1d789dec0decc30bc884a44a5621 358 SUPERFAMILY SSF55326 18 178 2.09E-51 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BEN78_10915 42ad1d789dec0decc30bc884a44a5621 358 Gene3D G3DSA:3.30.1330.10 17 180 5.5E-67 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BEN78_10915 42ad1d789dec0decc30bc884a44a5621 358 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 18 357 45.833 T 13-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BEN78_10915 42ad1d789dec0decc30bc884a44a5621 358 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 18 348 9.1E-132 T 13-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BEN78_11050 8c09d9d26b3b3c207ef6c5630523618d 1396 Gene3D G3DSA:3.90.1110.10 326 480 8.8E-30 T 13-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN78_11050 8c09d9d26b3b3c207ef6c5630523618d 1396 Pfam PF04565 RNA polymerase Rpb2, domain 3 553 620 3.1E-29 T 13-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN78_11050 8c09d9d26b3b3c207ef6c5630523618d 1396 SUPERFAMILY SSF64484 24 1394 0.0 T 13-10-2018 BEN78_11050 8c09d9d26b3b3c207ef6c5630523618d 1396 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1116 1128 - T 13-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN78_11050 8c09d9d26b3b3c207ef6c5630523618d 1396 Pfam PF04561 RNA polymerase Rpb2, domain 2 168 241 7.4E-8 T 13-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN78_11050 8c09d9d26b3b3c207ef6c5630523618d 1396 Pfam PF04561 RNA polymerase Rpb2, domain 2 461 494 1.2E-5 T 13-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN78_11050 8c09d9d26b3b3c207ef6c5630523618d 1396 Gene3D G3DSA:2.40.270.10 1088 1296 3.0E-87 T 13-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN78_11050 8c09d9d26b3b3c207ef6c5630523618d 1396 Gene3D G3DSA:2.40.50.150 874 997 6.3E-44 T 13-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN78_11050 8c09d9d26b3b3c207ef6c5630523618d 1396 Pfam PF04563 RNA polymerase beta subunit 39 539 1.0E-38 T 13-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN78_11050 8c09d9d26b3b3c207ef6c5630523618d 1396 Gene3D G3DSA:3.90.1800.10 1306 1357 7.3E-11 T 13-10-2018 BEN78_11050 8c09d9d26b3b3c207ef6c5630523618d 1396 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 20 1393 0.0 T 13-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN78_11050 8c09d9d26b3b3c207ef6c5630523618d 1396 Pfam PF04560 RNA polymerase Rpb2, domain 7 1320 1394 7.3E-27 T 13-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN78_11050 8c09d9d26b3b3c207ef6c5630523618d 1396 Gene3D G3DSA:3.90.1100.10 481 675 1.2E-69 T 13-10-2018 BEN78_11050 8c09d9d26b3b3c207ef6c5630523618d 1396 Pfam PF10385 RNA polymerase beta subunit external 1 domain 631 696 5.4E-22 T 13-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN78_11050 8c09d9d26b3b3c207ef6c5630523618d 1396 Pfam PF00562 RNA polymerase Rpb2, domain 6 758 1318 5.0E-158 T 13-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN78_11050 8c09d9d26b3b3c207ef6c5630523618d 1396 Gene3D G3DSA:2.40.270.10 831 873 5.6E-7 T 13-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN78_11050 8c09d9d26b3b3c207ef6c5630523618d 1396 Gene3D G3DSA:2.40.50.100 754 829 4.3E-30 T 13-10-2018 BEN78_11050 8c09d9d26b3b3c207ef6c5630523618d 1396 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 25 1396 12.343 T 13-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN78_11050 8c09d9d26b3b3c207ef6c5630523618d 1396 Gene3D G3DSA:3.90.1100.10 687 753 1.7E-20 T 13-10-2018 BEN78_11050 8c09d9d26b3b3c207ef6c5630523618d 1396 Gene3D G3DSA:3.90.1100.10 30 188 2.3E-55 T 13-10-2018 BEN78_12440 664cdce1852bc6ecabbc97b39f9c02f9 496 Gene3D G3DSA:2.20.200.10 113 366 6.5E-115 T 13-10-2018 BEN78_12440 664cdce1852bc6ecabbc97b39f9c02f9 496 SUPERFAMILY SSF56954 7 478 3.14E-96 T 13-10-2018 BEN78_12440 664cdce1852bc6ecabbc97b39f9c02f9 496 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 20 477 3.4E-132 T 13-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 BEN78_12440 664cdce1852bc6ecabbc97b39f9c02f9 496 Pfam PF02321 Outer membrane efflux protein 298 475 5.7E-24 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BEN78_12440 664cdce1852bc6ecabbc97b39f9c02f9 496 Pfam PF02321 Outer membrane efflux protein 76 266 8.3E-18 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BEN78_12440 664cdce1852bc6ecabbc97b39f9c02f9 496 Gene3D G3DSA:1.20.1600.10 66 477 6.5E-115 T 13-10-2018 BEN78_02895 9308f80900cbddb4e0646cc53c31202b 574 Pfam PF00999 Sodium/hydrogen exchanger family 13 387 8.5E-76 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 BEN78_02895 9308f80900cbddb4e0646cc53c31202b 574 Gene3D G3DSA:1.20.1530.20 5 402 3.7E-80 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily BEN78_02895 9308f80900cbddb4e0646cc53c31202b 574 Gene3D G3DSA:3.40.50.720 418 554 1.6E-27 T 13-10-2018 BEN78_02895 9308f80900cbddb4e0646cc53c31202b 574 SUPERFAMILY SSF51735 421 552 1.87E-25 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_02895 9308f80900cbddb4e0646cc53c31202b 574 Pfam PF02254 TrkA-N domain 424 536 5.5E-21 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 BEN78_01475 e7314eb8e4f7744832e299d30c8bd476 285 SUPERFAMILY SSF56112 19 221 2.16E-23 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily BEN78_01475 e7314eb8e4f7744832e299d30c8bd476 285 Pfam PF01163 RIO1 family 31 219 2.9E-39 T 13-10-2018 BEN78_01475 e7314eb8e4f7744832e299d30c8bd476 285 Gene3D G3DSA:1.10.510.10 138 222 8.9E-19 T 13-10-2018 BEN78_01475 e7314eb8e4f7744832e299d30c8bd476 285 SMART SM00090 2 234 1.4E-13 T 13-10-2018 IPR000687 RIO kinase GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1|Reactome: R-HSA-6791226 BEN78_10790 0617d1b11fe9af420bca1739cadf4250 315 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 17 314 3.1E-83 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BEN78_10790 0617d1b11fe9af420bca1739cadf4250 315 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 59 66 - T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BEN78_10790 0617d1b11fe9af420bca1739cadf4250 315 PRINTS PR00101 Aspartate carbamoyltransferase signature 87 96 1.1E-30 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BEN78_10790 0617d1b11fe9af420bca1739cadf4250 315 PRINTS PR00101 Aspartate carbamoyltransferase signature 144 161 1.1E-30 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BEN78_10790 0617d1b11fe9af420bca1739cadf4250 315 PRINTS PR00101 Aspartate carbamoyltransferase signature 230 239 1.1E-30 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BEN78_10790 0617d1b11fe9af420bca1739cadf4250 315 PRINTS PR00101 Aspartate carbamoyltransferase signature 271 276 1.1E-30 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BEN78_10790 0617d1b11fe9af420bca1739cadf4250 315 PRINTS PR00101 Aspartate carbamoyltransferase signature 49 71 1.1E-30 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BEN78_10790 0617d1b11fe9af420bca1739cadf4250 315 PRINTS PR00101 Aspartate carbamoyltransferase signature 295 309 1.1E-30 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BEN78_10790 0617d1b11fe9af420bca1739cadf4250 315 SUPERFAMILY SSF53671 15 314 9.17E-88 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 BEN78_10790 0617d1b11fe9af420bca1739cadf4250 315 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 279 302 1.5E-22 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BEN78_10790 0617d1b11fe9af420bca1739cadf4250 315 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 59 78 1.5E-22 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BEN78_10790 0617d1b11fe9af420bca1739cadf4250 315 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 276 1.5E-22 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BEN78_10790 0617d1b11fe9af420bca1739cadf4250 315 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 145 156 1.5E-22 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BEN78_10790 0617d1b11fe9af420bca1739cadf4250 315 Gene3D G3DSA:3.40.50.1370 145 293 3.6E-85 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 BEN78_10790 0617d1b11fe9af420bca1739cadf4250 315 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 17 157 1.5E-35 T 13-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 BEN78_10790 0617d1b11fe9af420bca1739cadf4250 315 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 166 312 2.3E-24 T 13-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 BEN78_10790 0617d1b11fe9af420bca1739cadf4250 315 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 16 315 38.5 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BEN78_10790 0617d1b11fe9af420bca1739cadf4250 315 Gene3D G3DSA:3.40.50.1370 21 310 3.6E-85 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 BEN78_00965 2631e5cbeba23c455ed32d2667b79129 392 SUPERFAMILY SSF51735 3 152 2.48E-40 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_00965 2631e5cbeba23c455ed32d2667b79129 392 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 5 385 43.96 T 13-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BEN78_00965 2631e5cbeba23c455ed32d2667b79129 392 PIRSF PIRSF006205 2 391 2.0E-140 T 13-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BEN78_00965 2631e5cbeba23c455ed32d2667b79129 392 SUPERFAMILY SSF55347 128 267 1.21E-57 T 13-10-2018 BEN78_00965 2631e5cbeba23c455ed32d2667b79129 392 Gene3D G3DSA:3.40.50.720 1 152 1.6E-46 T 13-10-2018 BEN78_00965 2631e5cbeba23c455ed32d2667b79129 392 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 5 134 3.3E-39 T 13-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BEN78_00965 2631e5cbeba23c455ed32d2667b79129 392 SUPERFAMILY SSF69055 295 387 1.96E-29 T 13-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BEN78_00965 2631e5cbeba23c455ed32d2667b79129 392 Gene3D G3DSA:1.10.1740.10 305 389 4.1E-27 T 13-10-2018 BEN78_00965 2631e5cbeba23c455ed32d2667b79129 392 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 148 232 5.3E-38 T 13-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BEN78_00965 2631e5cbeba23c455ed32d2667b79129 392 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 3 384 5.3E-132 T 13-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BEN78_00965 2631e5cbeba23c455ed32d2667b79129 392 Pfam PF13288 DXP reductoisomerase C-terminal domain 264 380 5.3E-35 T 13-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BEN78_16760 ebc2182b615c8fe71d34412da28f6376 79 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 3.5E-36 T 13-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 BEN78_16760 ebc2182b615c8fe71d34412da28f6376 79 SUPERFAMILY SSF47336 2 76 5.5E-23 T 13-10-2018 IPR036736 ACP-like superfamily BEN78_16760 ebc2182b615c8fe71d34412da28f6376 79 Gene3D G3DSA:1.10.1200.10 1 77 1.5E-29 T 13-10-2018 IPR036736 ACP-like superfamily BEN78_16760 ebc2182b615c8fe71d34412da28f6376 79 Pfam PF00550 Phosphopantetheine attachment site 6 73 2.9E-16 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain BEN78_16760 ebc2182b615c8fe71d34412da28f6376 79 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 13-10-2018 IPR006162 Phosphopantetheine attachment site BEN78_16760 ebc2182b615c8fe71d34412da28f6376 79 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 0.001 T 13-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 BEN78_16760 ebc2182b615c8fe71d34412da28f6376 79 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.451 T 13-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 BEN78_16460 1457f555e6423940141770f5b4907d9c 402 Pfam PF07690 Major Facilitator Superfamily 221 386 8.7E-11 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN78_16460 1457f555e6423940141770f5b4907d9c 402 Pfam PF07690 Major Facilitator Superfamily 35 207 3.3E-11 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN78_16460 1457f555e6423940141770f5b4907d9c 402 Gene3D G3DSA:1.20.1250.20 26 197 1.4E-11 T 13-10-2018 BEN78_16460 1457f555e6423940141770f5b4907d9c 402 SUPERFAMILY SSF103473 15 394 8.89E-30 T 13-10-2018 IPR036259 MFS transporter superfamily BEN78_16460 1457f555e6423940141770f5b4907d9c 402 Gene3D G3DSA:1.20.1250.20 211 392 3.3E-11 T 13-10-2018 BEN78_05650 c5bef847b9471cc37e4daf53f66ab52b 154 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 3.4E-20 T 13-10-2018 BEN78_05650 c5bef847b9471cc37e4daf53f66ab52b 154 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 3.4E-20 T 13-10-2018 BEN78_05650 c5bef847b9471cc37e4daf53f66ab52b 154 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 3.4E-20 T 13-10-2018 BEN78_05650 c5bef847b9471cc37e4daf53f66ab52b 154 Pfam PF02416 mttA/Hcf106 family 4 34 5.7E-7 T 13-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 BEN78_05650 c5bef847b9471cc37e4daf53f66ab52b 154 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 150 17.916 T 13-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 BEN78_05650 c5bef847b9471cc37e4daf53f66ab52b 154 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 79 4.0E-26 T 13-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 BEN78_12430 d504c2fe14f0bf60e9cd27e9c1e1fa1d 524 SUPERFAMILY SSF103473 14 511 3.14E-69 T 13-10-2018 IPR036259 MFS transporter superfamily BEN78_12430 d504c2fe14f0bf60e9cd27e9c1e1fa1d 524 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 27 506 9.0E-153 T 13-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 BEN78_12430 d504c2fe14f0bf60e9cd27e9c1e1fa1d 524 Gene3D G3DSA:1.20.1720.10 29 264 2.2E-48 T 13-10-2018 BEN78_12430 d504c2fe14f0bf60e9cd27e9c1e1fa1d 524 Pfam PF07690 Major Facilitator Superfamily 32 426 9.8E-54 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN78_05930 5ae9b12b802478e56e6059ac05a31fab 833 Gene3D G3DSA:3.30.70.100 14 77 1.5E-20 T 13-10-2018 BEN78_05930 5ae9b12b802478e56e6059ac05a31fab 833 Pfam PF00403 Heavy-metal-associated domain 82 139 5.0E-16 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 BEN78_05930 5ae9b12b802478e56e6059ac05a31fab 833 Pfam PF00403 Heavy-metal-associated domain 17 74 4.4E-13 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 BEN78_05930 5ae9b12b802478e56e6059ac05a31fab 833 Gene3D G3DSA:3.40.1110.10 518 638 3.3E-89 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 BEN78_05930 5ae9b12b802478e56e6059ac05a31fab 833 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 14 76 8.4E-11 T 13-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 BEN78_05930 5ae9b12b802478e56e6059ac05a31fab 833 SUPERFAMILY SSF81665 255 782 4.97E-13 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 BEN78_05930 5ae9b12b802478e56e6059ac05a31fab 833 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 509 515 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 BEN78_05930 5ae9b12b802478e56e6059ac05a31fab 833 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 277 784 4.8E-89 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BEN78_05930 5ae9b12b802478e56e6059ac05a31fab 833 SUPERFAMILY SSF55008 79 147 1.57E-21 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 BEN78_05930 5ae9b12b802478e56e6059ac05a31fab 833 Pfam PF00702 haloacid dehalogenase-like hydrolase 504 720 1.2E-41 T 13-10-2018 BEN78_05930 5ae9b12b802478e56e6059ac05a31fab 833 Gene3D G3DSA:2.70.150.20 293 409 3.2E-40 T 13-10-2018 BEN78_05930 5ae9b12b802478e56e6059ac05a31fab 833 Pfam PF00122 E1-E2 ATPase 306 485 1.1E-55 T 13-10-2018 BEN78_05930 5ae9b12b802478e56e6059ac05a31fab 833 Gene3D G3DSA:3.30.70.100 78 150 5.4E-22 T 13-10-2018 BEN78_05930 5ae9b12b802478e56e6059ac05a31fab 833 SUPERFAMILY SSF56784 505 813 3.97E-61 T 13-10-2018 IPR036412 HAD-like superfamily BEN78_05930 5ae9b12b802478e56e6059ac05a31fab 833 SUPERFAMILY SSF81653 309 405 3.01E-29 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 BEN78_05930 5ae9b12b802478e56e6059ac05a31fab 833 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 238 815 1.3E-185 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BEN78_05930 5ae9b12b802478e56e6059ac05a31fab 833 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 220 816 8.0E-178 T 13-10-2018 BEN78_05930 5ae9b12b802478e56e6059ac05a31fab 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 706 725 8.4E-29 T 13-10-2018 BEN78_05930 5ae9b12b802478e56e6059ac05a31fab 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 729 741 8.4E-29 T 13-10-2018 BEN78_05930 5ae9b12b802478e56e6059ac05a31fab 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 507 521 8.4E-29 T 13-10-2018 BEN78_05930 5ae9b12b802478e56e6059ac05a31fab 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 631 642 8.4E-29 T 13-10-2018 BEN78_05930 5ae9b12b802478e56e6059ac05a31fab 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 355 369 8.4E-29 T 13-10-2018 BEN78_05930 5ae9b12b802478e56e6059ac05a31fab 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 653 663 8.4E-29 T 13-10-2018 BEN78_05930 5ae9b12b802478e56e6059ac05a31fab 833 ProSitePatterns PS01047 Heavy-metal-associated domain. 18 47 - T 13-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 BEN78_05930 5ae9b12b802478e56e6059ac05a31fab 833 PRINTS PR00943 Copper-transporting ATPase signature 275 294 5.0E-10 T 13-10-2018 BEN78_05930 5ae9b12b802478e56e6059ac05a31fab 833 PRINTS PR00943 Copper-transporting ATPase signature 121 141 5.0E-10 T 13-10-2018 BEN78_05930 5ae9b12b802478e56e6059ac05a31fab 833 PRINTS PR00943 Copper-transporting ATPase signature 779 793 5.0E-10 T 13-10-2018 BEN78_05930 5ae9b12b802478e56e6059ac05a31fab 833 PRINTS PR00943 Copper-transporting ATPase signature 428 442 5.0E-10 T 13-10-2018 BEN78_05930 5ae9b12b802478e56e6059ac05a31fab 833 PRINTS PR00943 Copper-transporting ATPase signature 683 700 5.0E-10 T 13-10-2018 BEN78_05930 5ae9b12b802478e56e6059ac05a31fab 833 PRINTS PR00943 Copper-transporting ATPase signature 223 242 5.0E-10 T 13-10-2018 BEN78_05930 5ae9b12b802478e56e6059ac05a31fab 833 ProSitePatterns PS01047 Heavy-metal-associated domain. 85 114 - T 13-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 BEN78_05930 5ae9b12b802478e56e6059ac05a31fab 833 Gene3D G3DSA:3.40.50.1000 488 758 3.3E-89 T 13-10-2018 IPR023214 HAD superfamily BEN78_05930 5ae9b12b802478e56e6059ac05a31fab 833 SUPERFAMILY SSF55008 11 76 1.22E-18 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 BEN78_04690 fd553f3ae5da9c9ba6027e9cf88f60b1 379 Gene3D G3DSA:3.20.20.140 57 344 4.7E-120 T 13-10-2018 BEN78_04690 fd553f3ae5da9c9ba6027e9cf88f60b1 379 Pfam PF01979 Amidohydrolase family 53 374 1.4E-21 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BEN78_04690 fd553f3ae5da9c9ba6027e9cf88f60b1 379 SUPERFAMILY SSF51338 3 366 2.5E-10 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BEN78_04690 fd553f3ae5da9c9ba6027e9cf88f60b1 379 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 2 376 2.0E-91 T 13-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 BEN78_04690 fd553f3ae5da9c9ba6027e9cf88f60b1 379 Gene3D G3DSA:2.30.40.10 8 376 4.7E-120 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BEN78_04690 fd553f3ae5da9c9ba6027e9cf88f60b1 379 SUPERFAMILY SSF51556 56 350 1.81E-94 T 13-10-2018 IPR032466 Metal-dependent hydrolase BEN78_04690 fd553f3ae5da9c9ba6027e9cf88f60b1 379 PIRSF PIRSF038994 1 378 2.1E-105 T 13-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 BEN78_04775 2a8c0e13606a929aeff6cad8227fb4d6 166 Gene3D G3DSA:3.30.70.560 1 155 5.0E-38 T 13-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BEN78_04775 2a8c0e13606a929aeff6cad8227fb4d6 166 SUPERFAMILY SSF55083 1 153 6.15E-41 T 13-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BEN78_04775 2a8c0e13606a929aeff6cad8227fb4d6 166 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 130 1.8E-29 T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BEN78_04775 2a8c0e13606a929aeff6cad8227fb4d6 166 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 130 1.6E-26 T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BEN78_10360 768eb04a2da43624ecf74138a9e83242 298 Gene3D G3DSA:3.40.50.1820 21 266 1.2E-57 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_10360 768eb04a2da43624ecf74138a9e83242 298 SUPERFAMILY SSF53474 30 281 2.61E-45 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_10360 768eb04a2da43624ecf74138a9e83242 298 Pfam PF00135 Carboxylesterase family 43 150 1.6E-16 T 13-10-2018 IPR002018 Carboxylesterase, type B BEN78_11765 8420797c8ec25540bd1134af7106d8be 476 SUPERFAMILY SSF51556 89 411 4.91E-40 T 13-10-2018 IPR032466 Metal-dependent hydrolase BEN78_11765 8420797c8ec25540bd1134af7106d8be 476 Gene3D G3DSA:3.30.110.90 90 413 7.7E-48 T 13-10-2018 BEN78_11765 8420797c8ec25540bd1134af7106d8be 476 Gene3D G3DSA:2.30.40.10 40 447 7.7E-48 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BEN78_11765 8420797c8ec25540bd1134af7106d8be 476 Gene3D G3DSA:1.20.58.520 291 391 7.7E-48 T 13-10-2018 BEN78_11765 8420797c8ec25540bd1134af7106d8be 476 Gene3D G3DSA:3.40.50.10910 141 290 7.7E-48 T 13-10-2018 BEN78_11765 8420797c8ec25540bd1134af7106d8be 476 Pfam PF01979 Amidohydrolase family 87 449 7.0E-16 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BEN78_11765 8420797c8ec25540bd1134af7106d8be 476 SUPERFAMILY SSF51338 39 447 2.4E-7 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BEN78_11665 4f379bc1d57b9385e5d83e552a3aa459 167 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 17 39 2.1E-6 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site BEN78_11665 4f379bc1d57b9385e5d83e552a3aa459 167 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 17 120 1.0E-15 T 13-10-2018 IPR013362 Pilus modification type IV, PilV BEN78_11665 4f379bc1d57b9385e5d83e552a3aa459 167 Pfam PF07963 Prokaryotic N-terminal methylation motif 15 39 1.1E-7 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site BEN78_07625 56b5b9f5d0b7a907c02fdcfbd4e23bc2 93 SUPERFAMILY SSF143120 7 81 6.67E-17 T 13-10-2018 IPR036165 YefM-like superfamily BEN78_07625 56b5b9f5d0b7a907c02fdcfbd4e23bc2 93 Gene3D G3DSA:3.40.1620.10 3 43 1.8E-5 T 13-10-2018 BEN78_07625 56b5b9f5d0b7a907c02fdcfbd4e23bc2 93 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 7 56 5.8E-9 T 13-10-2018 BEN78_07625 56b5b9f5d0b7a907c02fdcfbd4e23bc2 93 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 6 74 1.7E-14 T 13-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM BEN78_02420 22ffeb829843a547144f7096ec4694f0 227 SMART SM00862 146 220 7.5E-18 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN78_02420 22ffeb829843a547144f7096ec4694f0 227 Gene3D G3DSA:3.40.50.2300 1 119 1.6E-36 T 13-10-2018 BEN78_02420 22ffeb829843a547144f7096ec4694f0 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 220 3.9E-18 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN78_02420 22ffeb829843a547144f7096ec4694f0 227 SMART SM00448 1 113 2.1E-40 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_02420 22ffeb829843a547144f7096ec4694f0 227 SUPERFAMILY SSF52172 1 171 1.42E-38 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_02420 22ffeb829843a547144f7096ec4694f0 227 Gene3D G3DSA:1.10.10.10 120 222 3.3E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_02420 22ffeb829843a547144f7096ec4694f0 227 Pfam PF00072 Response regulator receiver domain 3 112 6.4E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_09170 1f0876c95786f543e5cc7c498d283800 138 Pfam PF07007 Lysozyme inhibitor LprI 41 132 1.1E-11 T 13-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal BEN78_09170 1f0876c95786f543e5cc7c498d283800 138 Gene3D G3DSA:1.20.1270.180 24 137 1.3E-8 T 13-10-2018 BEN78_13570 2e7b07ad7c735986b412ab7267fdb625 286 Pfam PF13673 Acetyltransferase (GNAT) domain 10 125 7.0E-21 T 13-10-2018 IPR000182 GNAT domain BEN78_13570 2e7b07ad7c735986b412ab7267fdb625 286 SUPERFAMILY SSF55729 2 128 6.52E-36 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN78_13570 2e7b07ad7c735986b412ab7267fdb625 286 Gene3D G3DSA:3.40.630.30 1 128 2.3E-36 T 13-10-2018 BEN78_04390 e1f0d078670f1242ed6a39d0fd882d5f 218 Gene3D G3DSA:3.40.50.150 5 215 4.8E-65 T 13-10-2018 BEN78_04390 e1f0d078670f1242ed6a39d0fd882d5f 218 SUPERFAMILY SSF53335 23 211 1.4E-33 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_04390 e1f0d078670f1242ed6a39d0fd882d5f 218 PIRSF PIRSF003078 9 214 5.7E-63 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 BEN78_04390 e1f0d078670f1242ed6a39d0fd882d5f 218 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 31 209 1.6E-52 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 BEN78_04390 e1f0d078670f1242ed6a39d0fd882d5f 218 Pfam PF02527 rRNA small subunit methyltransferase G 30 207 1.8E-51 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 BEN78_04390 e1f0d078670f1242ed6a39d0fd882d5f 218 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 19 208 27.202 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 BEN78_14170 03fe3fbcb50851fc4f18463de58994a1 166 ProSitePatterns PS01317 SsrA-binding protein. 36 48 - T 13-10-2018 IPR020081 SsrA-binding protein, conserved site BEN78_14170 03fe3fbcb50851fc4f18463de58994a1 166 TIGRFAM TIGR00086 smpB: SsrA-binding protein 18 159 3.1E-50 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 BEN78_14170 03fe3fbcb50851fc4f18463de58994a1 166 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 18 142 1.0E-52 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 BEN78_14170 03fe3fbcb50851fc4f18463de58994a1 166 SUPERFAMILY SSF74982 13 142 3.79E-48 T 13-10-2018 IPR023620 Small protein B BEN78_14170 03fe3fbcb50851fc4f18463de58994a1 166 Pfam PF01668 SmpB protein 18 160 5.2E-55 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 BEN78_14170 03fe3fbcb50851fc4f18463de58994a1 166 Gene3D G3DSA:2.40.280.10 10 138 6.0E-44 T 13-10-2018 IPR023620 Small protein B BEN78_14170 03fe3fbcb50851fc4f18463de58994a1 166 Hamap MF_00023 SsrA-binding protein [smpB]. 1 165 68.371 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 BEN78_05705 168f9d3f5382c4dd5b4a551f6246c0c0 116 SUPERFAMILY SSF54913 5 72 9.34E-10 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta BEN78_05705 168f9d3f5382c4dd5b4a551f6246c0c0 116 Pfam PF09413 Putative prokaryotic signal transducing protein 3 68 2.6E-10 T 13-10-2018 IPR018551 Domain of unknown function DUF2007 BEN78_11410 977eb9a564d46d36038b228811ec59f6 244 Pfam PF00149 Calcineurin-like phosphoesterase 1 204 1.6E-7 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BEN78_11410 977eb9a564d46d36038b228811ec59f6 244 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 237 2.2E-95 T 13-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 BEN78_11410 977eb9a564d46d36038b228811ec59f6 244 Gene3D G3DSA:3.60.21.10 1 226 7.0E-16 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like BEN78_11410 977eb9a564d46d36038b228811ec59f6 244 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 244 111.338 T 13-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 BEN78_11410 977eb9a564d46d36038b228811ec59f6 244 SUPERFAMILY SSF56300 1 210 3.45E-31 T 13-10-2018 BEN78_03010 b8d3642359e1a44837655c7e346377e5 277 Pfam PF02709 N-terminal domain of galactosyltransferase 184 232 1.0E-5 T 13-10-2018 IPR027791 Galactosyltransferase, C-terminal Reactome: R-HSA-2022854|Reactome: R-HSA-975577 BEN78_03010 b8d3642359e1a44837655c7e346377e5 277 SUPERFAMILY SSF53448 3 249 3.56E-35 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_03010 b8d3642359e1a44837655c7e346377e5 277 Pfam PF00535 Glycosyl transferase family 2 7 109 2.2E-18 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BEN78_03010 b8d3642359e1a44837655c7e346377e5 277 Gene3D G3DSA:3.90.550.10 1 247 5.9E-38 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_10465 cc260f2e3187a22feab239a668bbfa4d 183 Pfam PF01883 Iron-sulfur cluster assembly protein 84 160 1.7E-12 T 13-10-2018 IPR002744 MIP18 family-like BEN78_10465 cc260f2e3187a22feab239a668bbfa4d 183 TIGRFAM TIGR03406 FeS_long_SufT: probable FeS assembly SUF system protein SufT 10 182 3.2E-81 T 13-10-2018 IPR017776 FeS assembly SUF system protein SufT, putative BEN78_10465 cc260f2e3187a22feab239a668bbfa4d 183 Gene3D G3DSA:3.30.300.130 75 182 6.2E-33 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily BEN78_10465 cc260f2e3187a22feab239a668bbfa4d 183 SUPERFAMILY SSF117916 82 181 1.31E-25 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily BEN78_15695 b20bcaf10e47b1524f081cf2a8b91878 286 Pfam PF08543 Phosphomethylpyrimidine kinase 117 266 1.6E-18 T 13-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 BEN78_15695 b20bcaf10e47b1524f081cf2a8b91878 286 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 27 45 - T 13-10-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 BEN78_15695 b20bcaf10e47b1524f081cf2a8b91878 286 Gene3D G3DSA:3.40.1190.20 15 282 4.3E-70 T 13-10-2018 IPR029056 Ribokinase-like BEN78_15695 b20bcaf10e47b1524f081cf2a8b91878 286 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 16 275 9.9E-44 T 13-10-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 BEN78_15695 b20bcaf10e47b1524f081cf2a8b91878 286 SUPERFAMILY SSF53613 17 274 3.27E-56 T 13-10-2018 IPR029056 Ribokinase-like BEN78_13900 55d447d2f107e229f6b7cb35f6ef9905 325 Gene3D G3DSA:3.20.20.300 1 306 2.4E-106 T 13-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 BEN78_13900 55d447d2f107e229f6b7cb35f6ef9905 325 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 233 250 - T 13-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 BEN78_13900 55d447d2f107e229f6b7cb35f6ef9905 325 SUPERFAMILY SSF51445 1 291 7.48E-81 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily BEN78_13900 55d447d2f107e229f6b7cb35f6ef9905 325 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 2 284 3.8E-78 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BEN78_07535 a089f367adfd60c23b276fa37c89ed32 207 Pfam PF04264 YceI-like domain 47 202 2.3E-16 T 13-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like BEN78_07535 a089f367adfd60c23b276fa37c89ed32 207 Gene3D G3DSA:2.40.128.110 46 204 1.7E-19 T 13-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily BEN78_07535 a089f367adfd60c23b276fa37c89ed32 207 SMART SM00867 44 204 9.3E-17 T 13-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like BEN78_07535 a089f367adfd60c23b276fa37c89ed32 207 SUPERFAMILY SSF101874 46 205 1.26E-22 T 13-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily BEN78_09220 58a47086a0cb0432e35a95844781933b 402 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 370 377 8.8E-10 T 13-10-2018 BEN78_09220 58a47086a0cb0432e35a95844781933b 402 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 165 174 8.8E-10 T 13-10-2018 BEN78_09220 58a47086a0cb0432e35a95844781933b 402 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 15 37 8.8E-10 T 13-10-2018 BEN78_09220 58a47086a0cb0432e35a95844781933b 402 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 16 35 1.3E-6 T 13-10-2018 BEN78_09220 58a47086a0cb0432e35a95844781933b 402 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 1.3E-6 T 13-10-2018 BEN78_09220 58a47086a0cb0432e35a95844781933b 402 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 162 180 1.3E-6 T 13-10-2018 BEN78_09220 58a47086a0cb0432e35a95844781933b 402 Pfam PF03486 HI0933-like protein 15 400 7.2E-142 T 13-10-2018 BEN78_09220 58a47086a0cb0432e35a95844781933b 402 Gene3D G3DSA:1.10.8.260 271 330 9.0E-124 T 13-10-2018 IPR023166 HI0933-like insert domain superfamily BEN78_09220 58a47086a0cb0432e35a95844781933b 402 SUPERFAMILY SSF51905 12 401 5.77E-56 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_09220 58a47086a0cb0432e35a95844781933b 402 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 16 399 6.5E-121 T 13-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like BEN78_09220 58a47086a0cb0432e35a95844781933b 402 SUPERFAMILY SSF160996 200 348 5.62E-36 T 13-10-2018 BEN78_09220 58a47086a0cb0432e35a95844781933b 402 Gene3D G3DSA:2.40.30.10 198 347 9.0E-124 T 13-10-2018 BEN78_09220 58a47086a0cb0432e35a95844781933b 402 Gene3D G3DSA:3.50.50.60 16 399 9.0E-124 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_06680 6274811c6317bb3e0e9319b01846cf05 350 Gene3D G3DSA:3.40.190.10 92 295 8.6E-56 T 13-10-2018 BEN78_06680 6274811c6317bb3e0e9319b01846cf05 350 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 6.6E-18 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_06680 6274811c6317bb3e0e9319b01846cf05 350 Pfam PF03466 LysR substrate binding domain 89 297 1.1E-39 T 13-10-2018 IPR005119 LysR, substrate-binding BEN78_06680 6274811c6317bb3e0e9319b01846cf05 350 Gene3D G3DSA:3.40.190.10 164 269 8.6E-56 T 13-10-2018 BEN78_06680 6274811c6317bb3e0e9319b01846cf05 350 Gene3D G3DSA:1.10.10.10 3 90 9.7E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_06680 6274811c6317bb3e0e9319b01846cf05 350 SUPERFAMILY SSF53850 89 298 1.5E-41 T 13-10-2018 BEN78_06680 6274811c6317bb3e0e9319b01846cf05 350 SUPERFAMILY SSF46785 3 113 2.08E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_05395 5edc56d9a3cda767a321dc2eea4b3d0b 192 Gene3D G3DSA:3.40.50.300 1 190 1.0E-64 T 13-10-2018 BEN78_05395 5edc56d9a3cda767a321dc2eea4b3d0b 192 PRINTS PR00094 Adenylate kinase signature 81 97 3.0E-34 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BEN78_05395 5edc56d9a3cda767a321dc2eea4b3d0b 192 PRINTS PR00094 Adenylate kinase signature 150 164 3.0E-34 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BEN78_05395 5edc56d9a3cda767a321dc2eea4b3d0b 192 PRINTS PR00094 Adenylate kinase signature 32 46 3.0E-34 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BEN78_05395 5edc56d9a3cda767a321dc2eea4b3d0b 192 PRINTS PR00094 Adenylate kinase signature 133 148 3.0E-34 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BEN78_05395 5edc56d9a3cda767a321dc2eea4b3d0b 192 PRINTS PR00094 Adenylate kinase signature 4 17 3.0E-34 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BEN78_05395 5edc56d9a3cda767a321dc2eea4b3d0b 192 Pfam PF00406 Adenylate kinase 5 163 2.8E-55 T 13-10-2018 BEN78_05395 5edc56d9a3cda767a321dc2eea4b3d0b 192 SUPERFAMILY SSF52540 1 186 5.96E-40 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_05395 5edc56d9a3cda767a321dc2eea4b3d0b 192 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 13-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BEN78_05395 5edc56d9a3cda767a321dc2eea4b3d0b 192 Hamap MF_00235 Adenylate kinase [adk]. 1 186 45.835 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BEN78_02370 53ede034edc04de79962d8c5c07f39bc 486 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 90 104 - T 13-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 BEN78_02370 53ede034edc04de79962d8c5c07f39bc 486 Gene3D G3DSA:3.40.50.1480 21 486 4.6E-233 T 13-10-2018 BEN78_02370 53ede034edc04de79962d8c5c07f39bc 486 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 244 406 8.5E-82 T 13-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 BEN78_02370 53ede034edc04de79962d8c5c07f39bc 486 SMART SM00996 18 485 0.0 T 13-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 BEN78_02370 53ede034edc04de79962d8c5c07f39bc 486 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 14 478 48.537 T 13-10-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 BEN78_02370 53ede034edc04de79962d8c5c07f39bc 486 SUPERFAMILY SSF52283 18 486 1.13E-114 T 13-10-2018 BEN78_02370 53ede034edc04de79962d8c5c07f39bc 486 PIRSF PIRSF001109 6 486 9.7E-192 T 13-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 BEN78_02370 53ede034edc04de79962d8c5c07f39bc 486 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 18 485 2.8E-148 T 13-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 BEN78_02370 53ede034edc04de79962d8c5c07f39bc 486 SUPERFAMILY SSF51735 244 406 7.98E-80 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_02370 53ede034edc04de79962d8c5c07f39bc 486 Gene3D G3DSA:3.40.50.720 247 407 4.6E-233 T 13-10-2018 BEN78_02370 53ede034edc04de79962d8c5c07f39bc 486 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 19 478 2.1E-190 T 13-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 BEN78_02370 53ede034edc04de79962d8c5c07f39bc 486 SMART SM00997 244 406 2.3E-110 T 13-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 BEN78_02370 53ede034edc04de79962d8c5c07f39bc 486 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 266 283 - T 13-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 BEN78_01015 2dbb5845728020cad79c4b5379489b9a 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 316 51.22 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN78_01015 2dbb5845728020cad79c4b5379489b9a 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 148 4.7E-63 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN78_01015 2dbb5845728020cad79c4b5379489b9a 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 197 206 7.7E-49 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN78_01015 2dbb5845728020cad79c4b5379489b9a 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 131 7.7E-49 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN78_01015 2dbb5845728020cad79c4b5379489b9a 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 88 99 7.7E-49 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN78_01015 2dbb5845728020cad79c4b5379489b9a 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 134 150 7.7E-49 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN78_01015 2dbb5845728020cad79c4b5379489b9a 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 153 166 7.7E-49 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN78_01015 2dbb5845728020cad79c4b5379489b9a 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 169 182 7.7E-49 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN78_01015 2dbb5845728020cad79c4b5379489b9a 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 316 1.6E-154 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN78_01015 2dbb5845728020cad79c4b5379489b9a 319 SUPERFAMILY SSF52096 5 316 5.86E-105 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BEN78_01015 2dbb5845728020cad79c4b5379489b9a 319 Gene3D G3DSA:3.90.226.10 1 318 1.8E-122 T 13-10-2018 BEN78_07375 7a4e5e5f86785bba547a94e8922e3f41 396 Gene3D G3DSA:3.30.1540.10 240 329 1.9E-108 T 13-10-2018 BEN78_07375 7a4e5e5f86785bba547a94e8922e3f41 396 SUPERFAMILY SSF89796 14 386 2.75E-112 T 13-10-2018 IPR023606 CoA-transferase family III domain superfamily BEN78_07375 7a4e5e5f86785bba547a94e8922e3f41 396 Gene3D G3DSA:3.40.50.10540 16 386 1.9E-108 T 13-10-2018 IPR023606 CoA-transferase family III domain superfamily BEN78_07375 7a4e5e5f86785bba547a94e8922e3f41 396 Pfam PF02515 CoA-transferase family III 17 378 1.5E-114 T 13-10-2018 IPR003673 CoA-transferase family III GO:0003824 BEN78_14100 99d6b8090ede1f888c7a3ca3aa9184e8 366 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 365 47.168 T 13-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 BEN78_14100 99d6b8090ede1f888c7a3ca3aa9184e8 366 Pfam PF00266 Aminotransferase class-V 5 354 7.3E-48 T 13-10-2018 IPR000192 Aminotransferase class V domain BEN78_14100 99d6b8090ede1f888c7a3ca3aa9184e8 366 SUPERFAMILY SSF53383 2 363 7.54E-106 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_14100 99d6b8090ede1f888c7a3ca3aa9184e8 366 Gene3D G3DSA:3.90.1150.10 256 366 1.1E-40 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN78_14100 99d6b8090ede1f888c7a3ca3aa9184e8 366 Gene3D G3DSA:3.40.640.10 17 255 1.0E-78 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN78_14100 99d6b8090ede1f888c7a3ca3aa9184e8 366 PIRSF PIRSF000525 1 366 5.7E-137 T 13-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 BEN78_14100 99d6b8090ede1f888c7a3ca3aa9184e8 366 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 5 364 4.4E-144 T 13-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 BEN78_14100 99d6b8090ede1f888c7a3ca3aa9184e8 366 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 192 211 - T 13-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BEN78_11510 1a54f56dc78f52c5a8b68731aa6c1370 169 PRINTS PR01837 MgtC/SapB protein signature 50 68 9.4E-41 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BEN78_11510 1a54f56dc78f52c5a8b68731aa6c1370 169 PRINTS PR01837 MgtC/SapB protein signature 77 99 9.4E-41 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BEN78_11510 1a54f56dc78f52c5a8b68731aa6c1370 169 PRINTS PR01837 MgtC/SapB protein signature 106 130 9.4E-41 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BEN78_11510 1a54f56dc78f52c5a8b68731aa6c1370 169 PRINTS PR01837 MgtC/SapB protein signature 31 50 9.4E-41 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BEN78_11510 1a54f56dc78f52c5a8b68731aa6c1370 169 Pfam PF02308 MgtC family 29 152 6.2E-37 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BEN78_08340 fee927333ebb2f0402378ee210633a9a 373 SUPERFAMILY SSF53756 8 369 1.26E-56 T 13-10-2018 BEN78_08340 fee927333ebb2f0402378ee210633a9a 373 Pfam PF00534 Glycosyl transferases group 1 195 344 1.1E-14 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 BEN78_08340 fee927333ebb2f0402378ee210633a9a 373 Gene3D G3DSA:3.40.50.2000 7 187 7.5E-27 T 13-10-2018 BEN78_08340 fee927333ebb2f0402378ee210633a9a 373 Pfam PF13439 Glycosyltransferase Family 4 17 171 1.6E-26 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 BEN78_08340 fee927333ebb2f0402378ee210633a9a 373 Gene3D G3DSA:3.40.50.2000 188 348 1.7E-20 T 13-10-2018 BEN78_00405 29fa5158ee7551999745497a16adcf34 545 Pfam PF01435 Peptidase family M48 64 262 1.9E-38 T 13-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 BEN78_00405 29fa5158ee7551999745497a16adcf34 545 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 2 535 34.273 T 13-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 BEN78_00405 29fa5158ee7551999745497a16adcf34 545 SUPERFAMILY SSF48452 333 437 1.99E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_00405 29fa5158ee7551999745497a16adcf34 545 Gene3D G3DSA:3.30.2010.10 61 143 1.2E-6 T 13-10-2018 BEN78_00405 29fa5158ee7551999745497a16adcf34 545 Gene3D G3DSA:1.25.40.10 307 535 1.9E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_15620 79a6643cad9059493fa850c74c01e23e 103 Gene3D G3DSA:2.60.120.10 3 99 1.0E-15 T 13-10-2018 IPR014710 RmlC-like jelly roll fold BEN78_15620 79a6643cad9059493fa850c74c01e23e 103 SUPERFAMILY SSF51182 37 101 2.08E-12 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily BEN78_15620 79a6643cad9059493fa850c74c01e23e 103 Pfam PF07883 Cupin domain 38 97 7.0E-7 T 13-10-2018 IPR013096 Cupin 2, conserved barrel BEN78_06280 f2ad7b5680b5ba4739af598c09672886 231 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 16 215 4.9E-50 T 13-10-2018 IPR010239 Conserved hypothetical protein CHP02001 BEN78_06280 f2ad7b5680b5ba4739af598c09672886 231 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 18 222 1.4E-51 T 13-10-2018 IPR010239 Conserved hypothetical protein CHP02001 BEN78_06035 58737d433dc013f80c83f63a3985da9f 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.9E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06035 58737d433dc013f80c83f63a3985da9f 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.9E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06035 58737d433dc013f80c83f63a3985da9f 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.9E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06035 58737d433dc013f80c83f63a3985da9f 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.9E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06035 58737d433dc013f80c83f63a3985da9f 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.9E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06035 58737d433dc013f80c83f63a3985da9f 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 186 0.0022 T 13-10-2018 BEN78_06035 58737d433dc013f80c83f63a3985da9f 244 Pfam PF00106 short chain dehydrogenase 8 195 1.7E-51 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06035 58737d433dc013f80c83f63a3985da9f 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.0E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06035 58737d433dc013f80c83f63a3985da9f 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.0E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06035 58737d433dc013f80c83f63a3985da9f 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.0E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06035 58737d433dc013f80c83f63a3985da9f 244 Gene3D G3DSA:3.40.50.720 4 241 1.8E-69 T 13-10-2018 BEN78_06035 58737d433dc013f80c83f63a3985da9f 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BEN78_06035 58737d433dc013f80c83f63a3985da9f 244 SUPERFAMILY SSF51735 2 230 8.15E-67 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_15815 8a92ba9932b0b524cfa3554ba714a0b4 670 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 292 346 - T 13-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_15815 8a92ba9932b0b524cfa3554ba714a0b4 670 PRINTS PR01165 Cytochrome c oxidase subunit I signature 360 381 5.0E-92 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_15815 8a92ba9932b0b524cfa3554ba714a0b4 670 PRINTS PR01165 Cytochrome c oxidase subunit I signature 239 258 5.0E-92 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_15815 8a92ba9932b0b524cfa3554ba714a0b4 670 PRINTS PR01165 Cytochrome c oxidase subunit I signature 109 132 5.0E-92 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_15815 8a92ba9932b0b524cfa3554ba714a0b4 670 PRINTS PR01165 Cytochrome c oxidase subunit I signature 178 190 5.0E-92 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_15815 8a92ba9932b0b524cfa3554ba714a0b4 670 PRINTS PR01165 Cytochrome c oxidase subunit I signature 290 311 5.0E-92 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_15815 8a92ba9932b0b524cfa3554ba714a0b4 670 PRINTS PR01165 Cytochrome c oxidase subunit I signature 336 351 5.0E-92 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_15815 8a92ba9932b0b524cfa3554ba714a0b4 670 PRINTS PR01165 Cytochrome c oxidase subunit I signature 473 494 5.0E-92 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_15815 8a92ba9932b0b524cfa3554ba714a0b4 670 PRINTS PR01165 Cytochrome c oxidase subunit I signature 395 413 5.0E-92 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_15815 8a92ba9932b0b524cfa3554ba714a0b4 670 PRINTS PR01165 Cytochrome c oxidase subunit I signature 136 160 5.0E-92 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_15815 8a92ba9932b0b524cfa3554ba714a0b4 670 PRINTS PR01165 Cytochrome c oxidase subunit I signature 59 84 5.0E-92 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_15815 8a92ba9932b0b524cfa3554ba714a0b4 670 PRINTS PR01165 Cytochrome c oxidase subunit I signature 210 228 5.0E-92 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_15815 8a92ba9932b0b524cfa3554ba714a0b4 670 PRINTS PR01165 Cytochrome c oxidase subunit I signature 423 442 5.0E-92 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_15815 8a92ba9932b0b524cfa3554ba714a0b4 670 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 68 515 4.8E-137 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_15815 8a92ba9932b0b524cfa3554ba714a0b4 670 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 13 657 0.0 T 13-10-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 BEN78_15815 8a92ba9932b0b524cfa3554ba714a0b4 670 Gene3D G3DSA:1.20.210.10 43 576 2.1E-189 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_15815 8a92ba9932b0b524cfa3554ba714a0b4 670 SUPERFAMILY SSF81442 55 571 8.37E-177 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_15745 52be1240eb016d46d8ee46bb7d629509 272 Pfam PF11738 Protein of unknown function (DUF3298) 165 255 3.3E-7 T 13-10-2018 IPR021729 Domain of unknown function DUF3298 BEN78_15745 52be1240eb016d46d8ee46bb7d629509 272 Gene3D G3DSA:3.90.640.20 156 262 3.8E-8 T 13-10-2018 IPR037126 PdaC/RsiV-like superfamily BEN78_08780 8dd138f3032bdf5a94645b44e94c4c98 293 Gene3D G3DSA:1.10.443.10 109 283 3.6E-56 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BEN78_08780 8dd138f3032bdf5a94645b44e94c4c98 293 Pfam PF00589 Phage integrase family 110 275 1.9E-43 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BEN78_08780 8dd138f3032bdf5a94645b44e94c4c98 293 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 3 289 58.64 T 13-10-2018 IPR023009 Tyrosine recombinase XerC/XerD BEN78_08780 8dd138f3032bdf5a94645b44e94c4c98 293 SUPERFAMILY SSF56349 6 282 6.47E-57 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BEN78_08780 8dd138f3032bdf5a94645b44e94c4c98 293 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 5 88 2.4E-24 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 BEN78_08780 8dd138f3032bdf5a94645b44e94c4c98 293 Gene3D G3DSA:1.10.150.130 2 96 2.0E-24 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal BEN78_08780 8dd138f3032bdf5a94645b44e94c4c98 293 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 6 291 7.1E-109 T 13-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 BEN78_04020 20f40028bdaf1a15f7cf6efe4faa9e08 444 SUPERFAMILY SSF46689 358 441 8.96E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN78_04020 20f40028bdaf1a15f7cf6efe4faa9e08 444 Gene3D G3DSA:3.40.50.2300 1 141 9.0E-27 T 13-10-2018 BEN78_04020 20f40028bdaf1a15f7cf6efe4faa9e08 444 Pfam PF00158 Sigma-54 interaction domain 158 320 1.1E-63 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BEN78_04020 20f40028bdaf1a15f7cf6efe4faa9e08 444 SMART SM00382 174 317 1.3E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_04020 20f40028bdaf1a15f7cf6efe4faa9e08 444 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 240 255 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BEN78_04020 20f40028bdaf1a15f7cf6efe4faa9e08 444 Gene3D G3DSA:1.10.8.60 326 392 1.7E-15 T 13-10-2018 BEN78_04020 20f40028bdaf1a15f7cf6efe4faa9e08 444 Pfam PF00072 Response regulator receiver domain 4 118 4.7E-18 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_04020 20f40028bdaf1a15f7cf6efe4faa9e08 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 405 422 1.1E-7 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BEN78_04020 20f40028bdaf1a15f7cf6efe4faa9e08 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 422 442 1.1E-7 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BEN78_04020 20f40028bdaf1a15f7cf6efe4faa9e08 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 359 368 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site BEN78_04020 20f40028bdaf1a15f7cf6efe4faa9e08 444 SUPERFAMILY SSF52172 1 198 1.18E-30 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_04020 20f40028bdaf1a15f7cf6efe4faa9e08 444 Gene3D G3DSA:3.40.50.300 142 325 7.3E-58 T 13-10-2018 BEN78_04020 20f40028bdaf1a15f7cf6efe4faa9e08 444 Gene3D G3DSA:1.10.10.60 393 443 1.0E-9 T 13-10-2018 BEN78_04020 20f40028bdaf1a15f7cf6efe4faa9e08 444 SMART SM00448 2 118 5.3E-15 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_04020 20f40028bdaf1a15f7cf6efe4faa9e08 444 Pfam PF02954 Bacterial regulatory protein, Fis family 403 439 1.1E-10 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BEN78_04020 20f40028bdaf1a15f7cf6efe4faa9e08 444 SUPERFAMILY SSF52540 157 385 1.9E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_08430 67936bf540ec10361c7617c05448203b 701 SUPERFAMILY SSF56935 21 701 3.33E-88 T 13-10-2018 BEN78_08430 67936bf540ec10361c7617c05448203b 701 Pfam PF00593 TonB dependent receptor 260 699 1.8E-30 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_08430 67936bf540ec10361c7617c05448203b 701 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 148 4.6E-13 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_08430 67936bf540ec10361c7617c05448203b 701 Gene3D G3DSA:2.170.130.10 30 153 9.6E-19 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_08430 67936bf540ec10361c7617c05448203b 701 Gene3D G3DSA:2.40.170.20 169 701 2.9E-59 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_13085 c896279817b96ddedaa4838a870ccc45 927 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 171 6.1E-24 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_13085 c896279817b96ddedaa4838a870ccc45 927 Gene3D G3DSA:2.40.170.20 456 927 9.0E-45 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_13085 c896279817b96ddedaa4838a870ccc45 927 SUPERFAMILY SSF56935 40 927 7.59E-94 T 13-10-2018 BEN78_13085 c896279817b96ddedaa4838a870ccc45 927 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 910 927 - T 13-10-2018 IPR010917 TonB-dependent receptor, conserved site BEN78_13085 c896279817b96ddedaa4838a870ccc45 927 Gene3D G3DSA:2.170.130.10 36 176 3.5E-37 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_13085 c896279817b96ddedaa4838a870ccc45 927 Pfam PF00593 TonB dependent receptor 468 925 1.0E-40 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_14330 bb9c2b976e380f1d560e38d641571c0c 133 SUPERFAMILY SSF88723 2 124 3.04E-11 T 13-10-2018 IPR029060 PIN-like domain superfamily BEN78_14330 bb9c2b976e380f1d560e38d641571c0c 133 Pfam PF01850 PIN domain 3 123 5.0E-8 T 13-10-2018 IPR002716 PIN domain BEN78_14330 bb9c2b976e380f1d560e38d641571c0c 133 Gene3D G3DSA:3.40.50.1010 3 129 4.8E-11 T 13-10-2018 BEN78_08745 fe04244eae51ac96c209d08c63634765 118 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 3 94 2.7E-31 T 13-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 BEN78_08745 fe04244eae51ac96c209d08c63634765 118 Gene3D G3DSA:3.30.479.10 1 118 1.4E-44 T 13-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 BEN78_08745 fe04244eae51ac96c209d08c63634765 118 SUPERFAMILY SSF55620 3 116 4.89E-37 T 13-10-2018 BEN78_08745 fe04244eae51ac96c209d08c63634765 118 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 117 3.5E-33 T 13-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 BEN78_08745 fe04244eae51ac96c209d08c63634765 118 PIRSF PIRSF006113 1 118 1.6E-47 T 13-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 BEN78_09140 ca222d25542f35397d9b6d0af3541b99 243 Gene3D G3DSA:1.10.150.240 20 102 1.1E-79 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BEN78_09140 ca222d25542f35397d9b6d0af3541b99 243 Gene3D G3DSA:3.40.50.1000 7 210 1.1E-79 T 13-10-2018 IPR023214 HAD superfamily BEN78_09140 ca222d25542f35397d9b6d0af3541b99 243 Pfam PF00702 haloacid dehalogenase-like hydrolase 5 186 5.6E-6 T 13-10-2018 BEN78_09140 ca222d25542f35397d9b6d0af3541b99 243 SUPERFAMILY SSF56784 2 213 8.12E-25 T 13-10-2018 IPR036412 HAD-like superfamily BEN78_03060 2875b9e19647e7721cdd36b7d5b3ba9d 1490 Gene3D G3DSA:2.160.20.60 1219 1479 3.3E-97 T 13-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 BEN78_03060 2875b9e19647e7721cdd36b7d5b3ba9d 1490 SUPERFAMILY SSF69336 1227 1476 2.88E-85 T 13-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 BEN78_03060 2875b9e19647e7721cdd36b7d5b3ba9d 1490 Gene3D G3DSA:3.20.20.70 492 1184 0.0 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_03060 2875b9e19647e7721cdd36b7d5b3ba9d 1490 SUPERFAMILY SSF51395 451 1201 1.01E-242 T 13-10-2018 BEN78_03060 2875b9e19647e7721cdd36b7d5b3ba9d 1490 Pfam PF04898 Glutamate synthase central domain 467 749 1.1E-94 T 13-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 BEN78_03060 2875b9e19647e7721cdd36b7d5b3ba9d 1490 Gene3D G3DSA:3.20.20.70 441 804 0.0 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_03060 2875b9e19647e7721cdd36b7d5b3ba9d 1490 Pfam PF01645 Conserved region in glutamate synthase 805 1168 8.4E-148 T 13-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 BEN78_03060 2875b9e19647e7721cdd36b7d5b3ba9d 1490 SUPERFAMILY SSF56235 24 439 2.32E-118 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BEN78_03060 2875b9e19647e7721cdd36b7d5b3ba9d 1490 Pfam PF00310 Glutamine amidotransferases class-II 24 436 9.8E-139 T 13-10-2018 IPR017932 Glutamine amidotransferase type 2 domain BEN78_03060 2875b9e19647e7721cdd36b7d5b3ba9d 1490 Gene3D G3DSA:3.60.20.10 24 554 0.0 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BEN78_03060 2875b9e19647e7721cdd36b7d5b3ba9d 1490 Pfam PF01493 GXGXG motif 1246 1430 9.1E-76 T 13-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 BEN78_07440 58dc8fa167fc370f602c33bf5940edf4 549 SUPERFAMILY SSF52743 18 413 1.01E-52 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BEN78_07440 58dc8fa167fc370f602c33bf5940edf4 549 PRINTS PR00723 Subtilisin serine protease family (S8) signature 328 344 2.2E-5 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN78_07440 58dc8fa167fc370f602c33bf5940edf4 549 PRINTS PR00723 Subtilisin serine protease family (S8) signature 105 118 2.2E-5 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN78_07440 58dc8fa167fc370f602c33bf5940edf4 549 Gene3D G3DSA:2.60.120.260 418 548 2.6E-20 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily BEN78_07440 58dc8fa167fc370f602c33bf5940edf4 549 Pfam PF01483 Proprotein convertase P-domain 455 527 2.1E-12 T 13-10-2018 IPR002884 P domain GO:0004252|GO:0006508 BEN78_07440 58dc8fa167fc370f602c33bf5940edf4 549 SUPERFAMILY SSF49785 445 547 5.1E-14 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily BEN78_07440 58dc8fa167fc370f602c33bf5940edf4 549 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 329 339 - T 13-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site BEN78_07440 58dc8fa167fc370f602c33bf5940edf4 549 Pfam PF00082 Subtilase family 59 401 4.4E-28 T 13-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BEN78_07440 58dc8fa167fc370f602c33bf5940edf4 549 Gene3D G3DSA:3.40.50.200 12 416 1.2E-81 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BEN78_07090 3350a9fa82e95fe45bb3bfc2e0f9f24a 282 SUPERFAMILY SSF46626 126 216 4.07E-18 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BEN78_07090 3350a9fa82e95fe45bb3bfc2e0f9f24a 282 SUPERFAMILY SSF46626 19 101 1.63E-18 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BEN78_07090 3350a9fa82e95fe45bb3bfc2e0f9f24a 282 Gene3D G3DSA:1.10.760.10 24 103 4.5E-20 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BEN78_07090 3350a9fa82e95fe45bb3bfc2e0f9f24a 282 Pfam PF00034 Cytochrome c 26 88 9.9E-7 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_07090 3350a9fa82e95fe45bb3bfc2e0f9f24a 282 Pfam PF00034 Cytochrome c 129 216 4.5E-10 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_07090 3350a9fa82e95fe45bb3bfc2e0f9f24a 282 Gene3D G3DSA:1.10.760.10 121 218 1.4E-24 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BEN78_13020 9aedfd3530b12f28ebd663bfb06263b6 475 Gene3D G3DSA:3.40.30.10 1 153 1.6E-22 T 13-10-2018 BEN78_13020 9aedfd3530b12f28ebd663bfb06263b6 475 SUPERFAMILY SSF52833 21 149 6.16E-17 T 13-10-2018 IPR036249 Thioredoxin-like superfamily BEN78_13020 9aedfd3530b12f28ebd663bfb06263b6 475 Pfam PF01436 NHL repeat 223 247 4.2E-6 T 13-10-2018 IPR001258 NHL repeat GO:0005515 BEN78_13020 9aedfd3530b12f28ebd663bfb06263b6 475 Pfam PF01436 NHL repeat 170 193 2.8E-6 T 13-10-2018 IPR001258 NHL repeat GO:0005515 BEN78_13020 9aedfd3530b12f28ebd663bfb06263b6 475 SUPERFAMILY SSF101898 170 467 7.32E-32 T 13-10-2018 BEN78_13020 9aedfd3530b12f28ebd663bfb06263b6 475 Gene3D G3DSA:2.120.10.30 170 253 3.5E-13 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BEN78_13020 9aedfd3530b12f28ebd663bfb06263b6 475 Gene3D G3DSA:2.120.10.30 277 420 2.4E-25 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BEN78_00880 34355377db97aa71474632ca433ea3a0 419 Gene3D G3DSA:1.20.1720.10 16 396 3.6E-99 T 13-10-2018 BEN78_00880 34355377db97aa71474632ca433ea3a0 419 PRINTS PR01035 Tetracycline resistance protein signature 56 75 1.2E-5 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BEN78_00880 34355377db97aa71474632ca433ea3a0 419 PRINTS PR01035 Tetracycline resistance protein signature 315 335 1.2E-5 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BEN78_00880 34355377db97aa71474632ca433ea3a0 419 PRINTS PR01035 Tetracycline resistance protein signature 141 163 1.2E-5 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BEN78_00880 34355377db97aa71474632ca433ea3a0 419 PRINTS PR01035 Tetracycline resistance protein signature 26 42 1.2E-5 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BEN78_00880 34355377db97aa71474632ca433ea3a0 419 SUPERFAMILY SSF103473 7 394 8.5E-63 T 13-10-2018 IPR036259 MFS transporter superfamily BEN78_00880 34355377db97aa71474632ca433ea3a0 419 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 16 373 6.6E-74 T 13-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 BEN78_00880 34355377db97aa71474632ca433ea3a0 419 Pfam PF07690 Major Facilitator Superfamily 23 363 6.0E-44 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN78_02525 32f6f583b1c534a8a9a31c1c01938095 172 Pfam PF01661 Macro domain 20 138 6.7E-43 T 13-10-2018 IPR002589 Macro domain BEN78_02525 32f6f583b1c534a8a9a31c1c01938095 172 Gene3D G3DSA:3.40.220.10 1 172 2.0E-66 T 13-10-2018 BEN78_02525 32f6f583b1c534a8a9a31c1c01938095 172 SUPERFAMILY SSF52949 5 171 3.03E-58 T 13-10-2018 BEN78_02525 32f6f583b1c534a8a9a31c1c01938095 172 SMART SM00506 3 138 6.1E-51 T 13-10-2018 IPR002589 Macro domain BEN78_10430 08281c64718543e70fb24e88cb89a1f0 371 SMART SM01002 148 310 9.5E-76 T 13-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain BEN78_10430 08281c64718543e70fb24e88cb89a1f0 371 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 8 139 7.5E-38 T 13-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal BEN78_10430 08281c64718543e70fb24e88cb89a1f0 371 SUPERFAMILY SSF52283 5 170 2.3E-44 T 13-10-2018 BEN78_10430 08281c64718543e70fb24e88cb89a1f0 371 SUPERFAMILY SSF51735 139 311 1.43E-36 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_10430 08281c64718543e70fb24e88cb89a1f0 371 Gene3D G3DSA:3.40.50.720 8 356 3.6E-131 T 13-10-2018 BEN78_10430 08281c64718543e70fb24e88cb89a1f0 371 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 143 356 5.8E-62 T 13-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain BEN78_10430 08281c64718543e70fb24e88cb89a1f0 371 Gene3D G3DSA:3.40.50.720 139 317 3.6E-131 T 13-10-2018 BEN78_10430 08281c64718543e70fb24e88cb89a1f0 371 SMART SM01003 6 139 2.0E-52 T 13-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal BEN78_10430 08281c64718543e70fb24e88cb89a1f0 371 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 172 197 - T 13-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 BEN78_09160 3c72dbe908989ef5b3655ca2fb1c353b 455 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BEN78_09160 3c72dbe908989ef5b3655ca2fb1c353b 455 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 1.5E-81 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BEN78_09160 3c72dbe908989ef5b3655ca2fb1c353b 455 Gene3D G3DSA:3.30.470.20 87 432 1.2E-155 T 13-10-2018 BEN78_09160 3c72dbe908989ef5b3655ca2fb1c353b 455 SUPERFAMILY SSF51246 331 444 1.62E-44 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 BEN78_09160 3c72dbe908989ef5b3655ca2fb1c353b 455 Gene3D G3DSA:3.30.1490.20 131 203 1.2E-155 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BEN78_09160 3c72dbe908989ef5b3655ca2fb1c353b 455 SUPERFAMILY SSF56059 83 348 8.13E-69 T 13-10-2018 BEN78_09160 3c72dbe908989ef5b3655ca2fb1c353b 455 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.2E-44 T 13-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BEN78_09160 3c72dbe908989ef5b3655ca2fb1c353b 455 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 1.3E-39 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BEN78_09160 3c72dbe908989ef5b3655ca2fb1c353b 455 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 9.3E-230 T 13-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 BEN78_09160 3c72dbe908989ef5b3655ca2fb1c353b 455 SUPERFAMILY SSF52440 1 113 3.74E-47 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BEN78_09160 3c72dbe908989ef5b3655ca2fb1c353b 455 Gene3D G3DSA:3.40.50.20 1 85 1.1E-34 T 13-10-2018 BEN78_09160 3c72dbe908989ef5b3655ca2fb1c353b 455 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BEN78_09160 3c72dbe908989ef5b3655ca2fb1c353b 455 SMART SM00878 336 441 1.8E-67 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BEN78_06410 8f4b4bd2c709615b46248520f4e41357 399 Gene3D G3DSA:1.25.40.10 224 385 6.7E-21 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_06410 8f4b4bd2c709615b46248520f4e41357 399 SUPERFAMILY SSF48452 114 209 5.24E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_06410 8f4b4bd2c709615b46248520f4e41357 399 Pfam PF13181 Tetratricopeptide repeat 356 382 0.0014 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN78_06410 8f4b4bd2c709615b46248520f4e41357 399 Pfam PF09976 Tetratricopeptide repeat-like domain 76 202 6.5E-6 T 13-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 BEN78_06410 8f4b4bd2c709615b46248520f4e41357 399 SUPERFAMILY SSF81901 186 387 1.94E-16 T 13-10-2018 BEN78_06410 8f4b4bd2c709615b46248520f4e41357 399 Pfam PF14559 Tetratricopeptide repeat 228 293 1.8E-7 T 13-10-2018 BEN78_06410 8f4b4bd2c709615b46248520f4e41357 399 Gene3D G3DSA:1.25.40.10 57 219 1.6E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_00445 7f678010aee9aa7cb714cc3538ba6e17 482 SMART SM00304 204 254 0.0036 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BEN78_00445 7f678010aee9aa7cb714cc3538ba6e17 482 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 366 475 1.4E-16 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_00445 7f678010aee9aa7cb714cc3538ba6e17 482 SMART SM00388 254 319 3.2E-13 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_00445 7f678010aee9aa7cb714cc3538ba6e17 482 Gene3D G3DSA:3.30.565.10 326 480 1.6E-29 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_00445 7f678010aee9aa7cb714cc3538ba6e17 482 SUPERFAMILY SSF55874 308 474 7.73E-34 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_00445 7f678010aee9aa7cb714cc3538ba6e17 482 SUPERFAMILY SSF47384 242 318 4.51E-13 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN78_00445 7f678010aee9aa7cb714cc3538ba6e17 482 SMART SM00387 365 476 1.2E-26 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_00445 7f678010aee9aa7cb714cc3538ba6e17 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 454 3.9E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_00445 7f678010aee9aa7cb714cc3538ba6e17 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 430 3.9E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_00445 7f678010aee9aa7cb714cc3538ba6e17 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 473 3.9E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_00445 7f678010aee9aa7cb714cc3538ba6e17 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 416 3.9E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_00445 7f678010aee9aa7cb714cc3538ba6e17 482 Pfam PF00512 His Kinase A (phospho-acceptor) domain 257 317 3.3E-11 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_00445 7f678010aee9aa7cb714cc3538ba6e17 482 SUPERFAMILY SSF103190 79 177 3.53E-11 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BEN78_00445 7f678010aee9aa7cb714cc3538ba6e17 482 Gene3D G3DSA:3.30.450.20 63 166 4.1E-5 T 13-10-2018 BEN78_00445 7f678010aee9aa7cb714cc3538ba6e17 482 Gene3D G3DSA:1.10.287.130 203 314 9.4E-15 T 13-10-2018 BEN78_02625 675d109292b531449b7eacb2ecdfc604 658 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 366 530 3.0E-38 T 13-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain BEN78_02625 675d109292b531449b7eacb2ecdfc604 658 Gene3D G3DSA:3.30.750.70 224 280 2.5E-6 T 13-10-2018 BEN78_02625 675d109292b531449b7eacb2ecdfc604 658 SUPERFAMILY SSF100950 224 539 1.93E-39 T 13-10-2018 IPR037171 NagB/RpiA transferase-like BEN78_02625 675d109292b531449b7eacb2ecdfc604 658 Gene3D G3DSA:3.40.1080.20 404 533 8.7E-28 T 13-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily BEN78_10700 87ae43df77019bd677f6c066512be216 97 SUPERFAMILY SSF142921 3 73 8.63E-6 T 13-10-2018 IPR036930 WGR domain superfamily BEN78_12540 aba7fa655508113f7070e9f00944e414 372 SUPERFAMILY SSF46626 210 372 6.83E-28 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BEN78_12540 aba7fa655508113f7070e9f00944e414 372 SUPERFAMILY SSF46626 65 217 1.57E-43 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BEN78_12540 aba7fa655508113f7070e9f00944e414 372 Pfam PF00034 Cytochrome c 244 372 2.6E-5 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_12540 aba7fa655508113f7070e9f00944e414 372 Gene3D G3DSA:1.10.760.10 75 218 4.9E-84 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BEN78_12540 aba7fa655508113f7070e9f00944e414 372 PIRSF PIRSF000294 61 372 9.2E-78 T 13-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 BEN78_12540 aba7fa655508113f7070e9f00944e414 372 Gene3D G3DSA:1.10.760.10 219 372 4.9E-84 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BEN78_12540 aba7fa655508113f7070e9f00944e414 372 Pfam PF03150 Di-haem cytochrome c peroxidase 84 232 2.0E-43 T 13-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 BEN78_13640 d8d62fd2e3f97dc8a1ccf2589d6aa775 304 Gene3D G3DSA:1.10.287.460 26 87 9.0E-11 T 13-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 BEN78_13640 d8d62fd2e3f97dc8a1ccf2589d6aa775 304 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 213 301 1.9E-26 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BEN78_13640 d8d62fd2e3f97dc8a1ccf2589d6aa775 304 SUPERFAMILY SSF54534 108 303 2.36E-52 T 13-10-2018 BEN78_13640 d8d62fd2e3f97dc8a1ccf2589d6aa775 304 Gene3D G3DSA:3.10.50.40 198 304 1.1E-41 T 13-10-2018 BEN78_13640 d8d62fd2e3f97dc8a1ccf2589d6aa775 304 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 107 206 2.4E-16 T 13-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 BEN78_13640 d8d62fd2e3f97dc8a1ccf2589d6aa775 304 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 19 90 1.3E-7 T 13-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 BEN78_13640 d8d62fd2e3f97dc8a1ccf2589d6aa775 304 Gene3D G3DSA:1.10.287.460 104 197 2.2E-12 T 13-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 BEN78_14010 dce009c4d7eda045a903798a9184b31b 546 Gene3D G3DSA:1.20.140.10 283 440 4.8E-34 T 13-10-2018 BEN78_14010 dce009c4d7eda045a903798a9184b31b 546 SUPERFAMILY SSF56645 66 292 2.82E-35 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 BEN78_14010 dce009c4d7eda045a903798a9184b31b 546 Gene3D G3DSA:2.40.110.20 129 282 1.7E-51 T 13-10-2018 BEN78_14010 dce009c4d7eda045a903798a9184b31b 546 SUPERFAMILY SSF47203 288 441 7.73E-39 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 BEN78_14010 dce009c4d7eda045a903798a9184b31b 546 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 438 1.1E-29 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 BEN78_14010 dce009c4d7eda045a903798a9184b31b 546 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 178 273 7.0E-14 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 BEN78_03895 5ed81a4e027625dfcd5cc4f680088d8a 241 SUPERFAMILY SSF52172 1 124 2.42E-34 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_03895 5ed81a4e027625dfcd5cc4f680088d8a 241 SMART SM00850 142 239 4.4E-26 T 13-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 BEN78_03895 5ed81a4e027625dfcd5cc4f680088d8a 241 Gene3D G3DSA:3.40.50.2300 1 125 5.8E-35 T 13-10-2018 BEN78_03895 5ed81a4e027625dfcd5cc4f680088d8a 241 Pfam PF04397 LytTr DNA-binding domain 144 237 9.2E-24 T 13-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 BEN78_03895 5ed81a4e027625dfcd5cc4f680088d8a 241 Pfam PF00072 Response regulator receiver domain 3 112 1.4E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_03895 5ed81a4e027625dfcd5cc4f680088d8a 241 Gene3D G3DSA:2.40.50.40 134 200 1.3E-10 T 13-10-2018 BEN78_03895 5ed81a4e027625dfcd5cc4f680088d8a 241 SMART SM00448 1 112 2.4E-32 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_09525 5a60bbc365b9adce424f144c53da2c39 149 SUPERFAMILY SSF89447 2 138 4.64E-38 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily BEN78_09525 5a60bbc365b9adce424f144c53da2c39 149 Pfam PF02381 MraZ protein, putative antitoxin-like 2 75 9.1E-8 T 13-10-2018 IPR020603 MraZ domain BEN78_09525 5a60bbc365b9adce424f144c53da2c39 149 Pfam PF02381 MraZ protein, putative antitoxin-like 80 133 7.8E-11 T 13-10-2018 IPR020603 MraZ domain BEN78_09525 5a60bbc365b9adce424f144c53da2c39 149 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 125 1.0E-46 T 13-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 BEN78_09525 5a60bbc365b9adce424f144c53da2c39 149 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 149 42.457 T 13-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 BEN78_09525 5a60bbc365b9adce424f144c53da2c39 149 Gene3D G3DSA:2.40.330.20 1 141 5.6E-34 T 13-10-2018 IPR038619 MraZ superfamily BEN78_10410 d5034e5a83c8523a677f85c8866dea05 184 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 180 5.2E-20 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BEN78_10410 d5034e5a83c8523a677f85c8866dea05 184 SUPERFAMILY SSF88659 119 181 3.71E-15 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN78_10410 d5034e5a83c8523a677f85c8866dea05 184 SUPERFAMILY SSF88946 16 97 3.1E-8 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BEN78_10410 d5034e5a83c8523a677f85c8866dea05 184 Pfam PF08281 Sigma-70, region 4 124 176 1.2E-16 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BEN78_10410 d5034e5a83c8523a677f85c8866dea05 184 Gene3D G3DSA:1.10.10.10 99 183 5.7E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_10410 d5034e5a83c8523a677f85c8866dea05 184 Pfam PF04542 Sigma-70 region 2 20 87 2.7E-5 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BEN78_01270 bbbcf5504bd27324f33560f935e150d5 389 Pfam PF07690 Major Facilitator Superfamily 29 247 1.6E-11 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN78_01270 bbbcf5504bd27324f33560f935e150d5 389 Gene3D G3DSA:1.20.1250.20 26 195 9.1E-17 T 13-10-2018 BEN78_01270 bbbcf5504bd27324f33560f935e150d5 389 Gene3D G3DSA:1.20.1250.20 204 387 6.8E-21 T 13-10-2018 BEN78_01270 bbbcf5504bd27324f33560f935e150d5 389 SUPERFAMILY SSF103473 28 388 5.89E-38 T 13-10-2018 IPR036259 MFS transporter superfamily BEN78_03435 fdb1896b14b15f17e59eb54c0e89e051 345 Pfam PF00591 Glycosyl transferase family, a/b domain 80 329 3.6E-93 T 13-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BEN78_03435 fdb1896b14b15f17e59eb54c0e89e051 345 SUPERFAMILY SSF52418 81 342 2.09E-96 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 BEN78_03435 fdb1896b14b15f17e59eb54c0e89e051 345 Gene3D G3DSA:1.20.970.10 1 71 5.6E-32 T 13-10-2018 BEN78_03435 fdb1896b14b15f17e59eb54c0e89e051 345 Gene3D G3DSA:3.40.1030.10 76 344 1.2E-108 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 BEN78_03435 fdb1896b14b15f17e59eb54c0e89e051 345 SUPERFAMILY SSF47648 6 72 2.75E-18 T 13-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 BEN78_03435 fdb1896b14b15f17e59eb54c0e89e051 345 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 7 339 37.541 T 13-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 BEN78_03435 fdb1896b14b15f17e59eb54c0e89e051 345 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 9 338 4.7E-125 T 13-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 BEN78_03435 fdb1896b14b15f17e59eb54c0e89e051 345 Pfam PF02885 Glycosyl transferase family, helical bundle domain 7 68 1.0E-13 T 13-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 BEN78_07330 3bf4307b4c09584365cefc6256ce9ca0 440 Gene3D G3DSA:3.30.70.360 221 338 2.2E-134 T 13-10-2018 BEN78_07330 3bf4307b4c09584365cefc6256ce9ca0 440 Gene3D G3DSA:3.40.630.10 41 417 2.2E-134 T 13-10-2018 BEN78_07330 3bf4307b4c09584365cefc6256ce9ca0 440 Pfam PF07687 Peptidase dimerisation domain 226 323 5.1E-9 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain BEN78_07330 3bf4307b4c09584365cefc6256ce9ca0 440 SUPERFAMILY SSF53187 30 433 4.37E-82 T 13-10-2018 BEN78_07330 3bf4307b4c09584365cefc6256ce9ca0 440 PIRSF PIRSF005962 25 435 9.2E-117 T 13-10-2018 IPR017439 Amidohydrolase GO:0016787 BEN78_07330 3bf4307b4c09584365cefc6256ce9ca0 440 Pfam PF01546 Peptidase family M20/M25/M40 98 425 1.7E-32 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 BEN78_07330 3bf4307b4c09584365cefc6256ce9ca0 440 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 41 420 3.1E-101 T 13-10-2018 IPR017439 Amidohydrolase GO:0016787 BEN78_07330 3bf4307b4c09584365cefc6256ce9ca0 440 SUPERFAMILY SSF55031 223 330 1.05E-27 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain BEN78_08435 7f9d51eff65dae078bea98684c5703db 103 SUPERFAMILY SSF54909 1 84 5.78E-16 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel BEN78_08435 7f9d51eff65dae078bea98684c5703db 103 Gene3D G3DSA:3.30.70.100 1 100 2.1E-20 T 13-10-2018 BEN78_08435 7f9d51eff65dae078bea98684c5703db 103 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 73 4.6E-13 T 13-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain BEN78_05815 59998a8fad1d92e242402e0b32837281 349 Pfam PF00268 Ribonucleotide reductase, small chain 34 307 7.3E-71 T 13-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN78_05815 59998a8fad1d92e242402e0b32837281 349 PIRSF PIRSF000355 5 349 1.2E-114 T 13-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN78_05815 59998a8fad1d92e242402e0b32837281 349 SUPERFAMILY SSF47240 25 349 3.61E-88 T 13-10-2018 IPR009078 Ferritin-like superfamily BEN78_05815 59998a8fad1d92e242402e0b32837281 349 Gene3D G3DSA:1.10.620.20 29 320 1.2E-80 T 13-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 BEN78_08795 4b504b90c2e39a159ad95204021591ee 183 Gene3D G3DSA:3.60.20.10 8 183 5.5E-67 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BEN78_08795 4b504b90c2e39a159ad95204021591ee 183 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 13 183 3.1E-83 T 13-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 BEN78_08795 4b504b90c2e39a159ad95204021591ee 183 Pfam PF00227 Proteasome subunit 9 181 8.4E-24 T 13-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 BEN78_08795 4b504b90c2e39a159ad95204021591ee 183 SUPERFAMILY SSF56235 9 182 1.4E-58 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BEN78_08795 4b504b90c2e39a159ad95204021591ee 183 PIRSF PIRSF039093 6 183 4.5E-85 T 13-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 BEN78_08795 4b504b90c2e39a159ad95204021591ee 183 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 12 183 41.188 T 13-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 BEN78_01560 110a9a2732741f8325d941fd0cd09135 482 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 31 187 2.1E-34 T 13-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 BEN78_01560 110a9a2732741f8325d941fd0cd09135 482 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 216 454 3.1E-66 T 13-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 BEN78_01560 110a9a2732741f8325d941fd0cd09135 482 PRINTS PR00084 Mannitol dehydrogenase signature 32 42 2.1E-17 T 13-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 BEN78_01560 110a9a2732741f8325d941fd0cd09135 482 PRINTS PR00084 Mannitol dehydrogenase signature 178 191 2.1E-17 T 13-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 BEN78_01560 110a9a2732741f8325d941fd0cd09135 482 PRINTS PR00084 Mannitol dehydrogenase signature 217 230 2.1E-17 T 13-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 BEN78_01560 110a9a2732741f8325d941fd0cd09135 482 PRINTS PR00084 Mannitol dehydrogenase signature 247 262 2.1E-17 T 13-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 BEN78_01560 110a9a2732741f8325d941fd0cd09135 482 SUPERFAMILY SSF48179 282 479 2.72E-51 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BEN78_01560 110a9a2732741f8325d941fd0cd09135 482 SUPERFAMILY SSF51735 7 280 2.01E-93 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_01560 110a9a2732741f8325d941fd0cd09135 482 Gene3D G3DSA:1.10.1040.10 281 482 1.6E-62 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BEN78_01560 110a9a2732741f8325d941fd0cd09135 482 Gene3D G3DSA:3.40.50.720 4 280 1.3E-104 T 13-10-2018 BEN78_16830 584d436cce21df58c60c72afed613bce 378 Pfam PF00487 Fatty acid desaturase 73 341 1.2E-31 T 13-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 BEN78_14595 25fedc51fd5f4c2c7ead7a7e90ba30f2 400 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 4 399 5.1E-95 T 13-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 BEN78_14595 25fedc51fd5f4c2c7ead7a7e90ba30f2 400 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 1.3E-23 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BEN78_14595 25fedc51fd5f4c2c7ead7a7e90ba30f2 400 SUPERFAMILY SSF64518 1 400 6.02E-72 T 13-10-2018 BEN78_14595 25fedc51fd5f4c2c7ead7a7e90ba30f2 400 Gene3D G3DSA:1.20.1330.10 248 374 1.3E-6 T 13-10-2018 BEN78_14595 25fedc51fd5f4c2c7ead7a7e90ba30f2 400 Gene3D G3DSA:1.20.1330.10 42 213 1.8E-43 T 13-10-2018 BEN78_10525 1eca5e15d1bf3fb5ecdea5c1fed34c9a 530 Gene3D G3DSA:3.50.50.60 10 521 4.8E-173 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_10525 1eca5e15d1bf3fb5ecdea5c1fed34c9a 530 SUPERFAMILY SSF51905 7 528 2.04E-84 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_10525 1eca5e15d1bf3fb5ecdea5c1fed34c9a 530 Gene3D G3DSA:3.30.560.10 47 468 4.8E-173 T 13-10-2018 BEN78_10525 1eca5e15d1bf3fb5ecdea5c1fed34c9a 530 Pfam PF05199 GMC oxidoreductase 386 523 2.6E-34 T 13-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 BEN78_10525 1eca5e15d1bf3fb5ecdea5c1fed34c9a 530 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 258 272 - T 13-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 BEN78_10525 1eca5e15d1bf3fb5ecdea5c1fed34c9a 530 SUPERFAMILY SSF54373 315 473 4.22E-29 T 13-10-2018 BEN78_10525 1eca5e15d1bf3fb5ecdea5c1fed34c9a 530 PIRSF PIRSF000137 3 530 1.4E-132 T 13-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 BEN78_10525 1eca5e15d1bf3fb5ecdea5c1fed34c9a 530 Pfam PF00732 GMC oxidoreductase 9 297 7.9E-84 T 13-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 BEN78_02545 efa919509c8f28d93b13fa6753fec1f2 391 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 13-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_02545 efa919509c8f28d93b13fa6753fec1f2 391 Pfam PF00162 Phosphoglycerate kinase 6 378 5.8E-141 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_02545 efa919509c8f28d93b13fa6753fec1f2 391 Gene3D G3DSA:3.40.50.1260 8 386 4.5E-147 T 13-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_02545 efa919509c8f28d93b13fa6753fec1f2 391 SUPERFAMILY SSF53748 4 387 4.12E-145 T 13-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_02545 efa919509c8f28d93b13fa6753fec1f2 391 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 388 38.894 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_02545 efa919509c8f28d93b13fa6753fec1f2 391 PIRSF PIRSF000724 1 390 1.3E-132 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_02545 efa919509c8f28d93b13fa6753fec1f2 391 PRINTS PR00477 Phosphoglycerate kinase family signature 341 352 1.5E-78 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_02545 efa919509c8f28d93b13fa6753fec1f2 391 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 1.5E-78 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_02545 efa919509c8f28d93b13fa6753fec1f2 391 PRINTS PR00477 Phosphoglycerate kinase family signature 364 381 1.5E-78 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_02545 efa919509c8f28d93b13fa6753fec1f2 391 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 1.5E-78 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_02545 efa919509c8f28d93b13fa6753fec1f2 391 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 1.5E-78 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_02545 efa919509c8f28d93b13fa6753fec1f2 391 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 1.5E-78 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_02545 efa919509c8f28d93b13fa6753fec1f2 391 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 1.5E-78 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_02545 efa919509c8f28d93b13fa6753fec1f2 391 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 1.5E-78 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_02545 efa919509c8f28d93b13fa6753fec1f2 391 PRINTS PR00477 Phosphoglycerate kinase family signature 308 333 1.5E-78 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_02545 efa919509c8f28d93b13fa6753fec1f2 391 Gene3D G3DSA:3.40.50.1260 165 378 4.5E-147 T 13-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_05310 50740300eb2d555266d66d8a07d2d1c1 408 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 14 401 7.7E-142 T 13-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 BEN78_05310 50740300eb2d555266d66d8a07d2d1c1 408 Gene3D G3DSA:3.40.640.10 58 306 1.1E-144 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN78_05310 50740300eb2d555266d66d8a07d2d1c1 408 Gene3D G3DSA:3.90.1150.10 24 394 1.1E-144 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN78_05310 50740300eb2d555266d66d8a07d2d1c1 408 SUPERFAMILY SSF53383 13 401 5.65E-123 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_05310 50740300eb2d555266d66d8a07d2d1c1 408 PIRSF PIRSF000521 173 404 3.1E-34 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BEN78_05310 50740300eb2d555266d66d8a07d2d1c1 408 PIRSF PIRSF000521 19 159 9.6E-6 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BEN78_05310 50740300eb2d555266d66d8a07d2d1c1 408 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 224 261 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BEN78_05310 50740300eb2d555266d66d8a07d2d1c1 408 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 14 404 70.208 T 13-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 BEN78_05310 50740300eb2d555266d66d8a07d2d1c1 408 Pfam PF00202 Aminotransferase class-III 23 401 7.4E-116 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BEN78_06360 4807c6a37e59a85be01e3cc4ec1019ee 103 SUPERFAMILY SSF55785 19 82 3.14E-6 T 13-10-2018 IPR035965 PAS domain superfamily BEN78_06360 4807c6a37e59a85be01e3cc4ec1019ee 103 Pfam PF08448 PAS fold 20 86 2.3E-5 T 13-10-2018 IPR013656 PAS fold-4 BEN78_03115 f0549842fc33b0f69ab5a54cc31ea90a 540 Gene3D G3DSA:2.60.120.200 358 538 2.4E-18 T 13-10-2018 BEN78_03115 f0549842fc33b0f69ab5a54cc31ea90a 540 SUPERFAMILY SSF75005 57 338 1.57E-78 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BEN78_03115 f0549842fc33b0f69ab5a54cc31ea90a 540 SUPERFAMILY SSF49899 357 537 7.91E-21 T 13-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily BEN78_03115 f0549842fc33b0f69ab5a54cc31ea90a 540 Gene3D G3DSA:2.115.10.20 55 341 4.2E-76 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BEN78_03115 f0549842fc33b0f69ab5a54cc31ea90a 540 Pfam PF04616 Glycosyl hydrolases family 43 58 332 9.4E-88 T 13-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 BEN78_14105 51364f5d191c8a4b46c736a1fa3af5f9 373 SUPERFAMILY SSF55021 275 370 1.37E-27 T 13-10-2018 BEN78_14105 51364f5d191c8a4b46c736a1fa3af5f9 373 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 256 278 - T 13-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 BEN78_14105 51364f5d191c8a4b46c736a1fa3af5f9 373 Gene3D G3DSA:1.20.59.10 19 104 1.9E-27 T 13-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BEN78_14105 51364f5d191c8a4b46c736a1fa3af5f9 373 Gene3D G3DSA:3.40.190.10 108 278 5.9E-56 T 13-10-2018 BEN78_14105 51364f5d191c8a4b46c736a1fa3af5f9 373 Pfam PF00800 Prephenate dehydratase 106 280 1.3E-58 T 13-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 BEN78_14105 51364f5d191c8a4b46c736a1fa3af5f9 373 SMART SM00830 23 104 7.9E-28 T 13-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BEN78_14105 51364f5d191c8a4b46c736a1fa3af5f9 373 TIGRFAM TIGR01807 CM_P2: chorismate mutase 19 94 8.3E-26 T 13-10-2018 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 BEN78_14105 51364f5d191c8a4b46c736a1fa3af5f9 373 SUPERFAMILY SSF53850 105 289 8.25E-55 T 13-10-2018 BEN78_14105 51364f5d191c8a4b46c736a1fa3af5f9 373 Pfam PF01842 ACT domain 292 355 9.9E-10 T 13-10-2018 IPR002912 ACT domain BEN78_14105 51364f5d191c8a4b46c736a1fa3af5f9 373 Gene3D G3DSA:3.30.70.260 283 372 8.6E-28 T 13-10-2018 BEN78_14105 51364f5d191c8a4b46c736a1fa3af5f9 373 SUPERFAMILY SSF48600 16 103 7.63E-20 T 13-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BEN78_14105 51364f5d191c8a4b46c736a1fa3af5f9 373 PIRSF PIRSF001500 13 372 1.8E-131 T 13-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 BEN78_14105 51364f5d191c8a4b46c736a1fa3af5f9 373 Pfam PF01817 Chorismate mutase type II 23 102 7.6E-22 T 13-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BEN78_14105 51364f5d191c8a4b46c736a1fa3af5f9 373 Gene3D G3DSA:3.40.190.10 186 270 5.9E-56 T 13-10-2018 BEN78_07980 6302ceb6855a7a3589f62e3b7ce1fdfb 338 Gene3D G3DSA:2.60.120.1660 2 281 5.2E-44 T 13-10-2018 BEN78_07980 6302ceb6855a7a3589f62e3b7ce1fdfb 338 Pfam PF13621 Cupin-like domain 21 261 1.0E-46 T 13-10-2018 BEN78_07980 6302ceb6855a7a3589f62e3b7ce1fdfb 338 SMART SM00558 116 276 0.0017 T 13-10-2018 IPR003347 JmjC domain BEN78_07980 6302ceb6855a7a3589f62e3b7ce1fdfb 338 SUPERFAMILY SSF51197 20 301 3.71E-52 T 13-10-2018 BEN78_05645 938a168594192e2e8f55d428bf51c867 75 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 69 22.333 T 13-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 BEN78_05645 938a168594192e2e8f55d428bf51c867 75 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 47 7.3E-23 T 13-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 BEN78_05645 938a168594192e2e8f55d428bf51c867 75 Pfam PF02416 mttA/Hcf106 family 5 47 6.1E-15 T 13-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 BEN78_06425 9747604fbc9728c7c5dfab9432efaafe 366 SUPERFAMILY SSF52540 3 336 5.55E-29 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_06425 9747604fbc9728c7c5dfab9432efaafe 366 Gene3D G3DSA:1.20.1050.90 123 303 3.3E-71 T 13-10-2018 BEN78_06425 9747604fbc9728c7c5dfab9432efaafe 366 ProSitePatterns PS00618 RecF protein signature 2. 304 322 - T 13-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 BEN78_06425 9747604fbc9728c7c5dfab9432efaafe 366 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 337 8.1E-12 T 13-10-2018 IPR003395 RecF/RecN/SMC, N-terminal BEN78_06425 9747604fbc9728c7c5dfab9432efaafe 366 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 2 360 6.2E-71 T 13-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 BEN78_06425 9747604fbc9728c7c5dfab9432efaafe 366 ProSitePatterns PS00617 RecF protein signature 1. 120 140 - T 13-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 BEN78_06425 9747604fbc9728c7c5dfab9432efaafe 366 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 366 81.694 T 13-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 BEN78_06425 9747604fbc9728c7c5dfab9432efaafe 366 Gene3D G3DSA:3.40.50.300 7 339 3.3E-71 T 13-10-2018 BEN78_11355 9fcec96b678c82fbc2f4e00e975baf5d 340 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 339 58.268 T 13-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 BEN78_11355 9fcec96b678c82fbc2f4e00e975baf5d 340 SUPERFAMILY SSF51735 141 304 1.16E-35 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_11355 9fcec96b678c82fbc2f4e00e975baf5d 340 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 13-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 BEN78_11355 9fcec96b678c82fbc2f4e00e975baf5d 340 SMART SM00829 12 337 6.8E-4 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BEN78_11355 9fcec96b678c82fbc2f4e00e975baf5d 340 Gene3D G3DSA:3.40.50.720 153 285 5.3E-110 T 13-10-2018 BEN78_11355 9fcec96b678c82fbc2f4e00e975baf5d 340 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 3 339 4.1E-147 T 13-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 BEN78_11355 9fcec96b678c82fbc2f4e00e975baf5d 340 Pfam PF00107 Zinc-binding dehydrogenase 174 301 3.5E-28 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BEN78_11355 9fcec96b678c82fbc2f4e00e975baf5d 340 SUPERFAMILY SSF50129 1 173 1.52E-56 T 13-10-2018 IPR011032 GroES-like superfamily BEN78_11355 9fcec96b678c82fbc2f4e00e975baf5d 340 Gene3D G3DSA:3.90.180.10 21 327 5.3E-110 T 13-10-2018 BEN78_11355 9fcec96b678c82fbc2f4e00e975baf5d 340 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 135 1.2E-32 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BEN78_06625 cb374e15ba900b6ee876e1c642107216 351 Gene3D G3DSA:2.40.180.20 57 314 8.1E-100 T 13-10-2018 BEN78_06625 cb374e15ba900b6ee876e1c642107216 351 Gene3D G3DSA:1.20.1280.120 37 328 8.1E-100 T 13-10-2018 BEN78_06625 cb374e15ba900b6ee876e1c642107216 351 Pfam PF00199 Catalase 51 327 6.6E-23 T 13-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BEN78_06625 cb374e15ba900b6ee876e1c642107216 351 SMART SM01060 8 346 9.3E-7 T 13-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BEN78_06625 cb374e15ba900b6ee876e1c642107216 351 SUPERFAMILY SSF56634 18 332 7.2E-85 T 13-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BEN78_06625 cb374e15ba900b6ee876e1c642107216 351 PIRSF PIRSF000296 1 335 3.1E-117 T 13-10-2018 IPR024168 Catalase, SrpA-type, predicted BEN78_01800 a3038c4264fea7daf3539893204a40b5 131 Pfam PF04247 Invasion gene expression up-regulator, SirB 5 124 9.3E-30 T 13-10-2018 IPR007360 Invasion gene expression up-regulator, SirB BEN78_01800 a3038c4264fea7daf3539893204a40b5 131 PIRSF PIRSF005610 1 122 2.2E-21 T 13-10-2018 IPR007360 Invasion gene expression up-regulator, SirB BEN78_13865 b17740afbbd72ea60a45f8be564c92ba 246 Pfam PF11967 Recombination protein O N terminal 5 78 4.8E-19 T 13-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal BEN78_13865 b17740afbbd72ea60a45f8be564c92ba 246 Gene3D G3DSA:2.40.50.140 4 79 4.0E-26 T 13-10-2018 BEN78_13865 b17740afbbd72ea60a45f8be564c92ba 246 Pfam PF02565 Recombination protein O C terminal 85 232 2.6E-20 T 13-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 BEN78_13865 b17740afbbd72ea60a45f8be564c92ba 246 Hamap MF_00201 DNA repair protein RecO [recO]. 2 237 19.308 T 13-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 BEN78_13865 b17740afbbd72ea60a45f8be564c92ba 246 TIGRFAM TIGR00613 reco: DNA repair protein RecO 8 160 4.1E-18 T 13-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 BEN78_13865 b17740afbbd72ea60a45f8be564c92ba 246 Gene3D G3DSA:1.20.1440.120 82 244 3.1E-38 T 13-10-2018 BEN78_13865 b17740afbbd72ea60a45f8be564c92ba 246 SUPERFAMILY SSF50249 3 78 1.23E-10 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN78_06685 d52b1cdb7e187216473049a5dcd4f1a8 322 Gene3D G3DSA:3.40.190.10 107 303 5.7E-56 T 13-10-2018 BEN78_06685 d52b1cdb7e187216473049a5dcd4f1a8 322 Pfam PF03466 LysR substrate binding domain 104 305 7.6E-47 T 13-10-2018 IPR005119 LysR, substrate-binding BEN78_06685 d52b1cdb7e187216473049a5dcd4f1a8 322 SUPERFAMILY SSF53850 106 306 1.85E-45 T 13-10-2018 BEN78_06685 d52b1cdb7e187216473049a5dcd4f1a8 322 Gene3D G3DSA:1.10.10.10 17 99 3.6E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_06685 d52b1cdb7e187216473049a5dcd4f1a8 322 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 77 9.2E-21 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_06685 d52b1cdb7e187216473049a5dcd4f1a8 322 Gene3D G3DSA:3.40.190.10 180 280 5.7E-56 T 13-10-2018 BEN78_06685 d52b1cdb7e187216473049a5dcd4f1a8 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 54 65 2.6E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_06685 d52b1cdb7e187216473049a5dcd4f1a8 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 54 2.6E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_06685 d52b1cdb7e187216473049a5dcd4f1a8 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 44 2.6E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_06685 d52b1cdb7e187216473049a5dcd4f1a8 322 SUPERFAMILY SSF46785 17 94 3.74E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_13275 f2ec60cb6d288f86899476aa52bb9527 199 Gene3D G3DSA:3.40.1360.10 75 196 1.2E-37 T 13-10-2018 BEN78_13275 f2ec60cb6d288f86899476aa52bb9527 199 SMART SM00493 78 163 9.4E-11 T 13-10-2018 IPR006171 TOPRIM domain BEN78_13275 f2ec60cb6d288f86899476aa52bb9527 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 196 94.899 T 13-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 BEN78_13275 f2ec60cb6d288f86899476aa52bb9527 199 SUPERFAMILY SSF111304 3 196 5.89E-68 T 13-10-2018 IPR023627 Recombination protein RecR BEN78_13275 f2ec60cb6d288f86899476aa52bb9527 199 Pfam PF02132 RecR protein 39 76 1.2E-12 T 13-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger BEN78_13275 f2ec60cb6d288f86899476aa52bb9527 199 Pfam PF13662 Toprim domain 79 167 5.0E-22 T 13-10-2018 IPR006171 TOPRIM domain BEN78_13275 f2ec60cb6d288f86899476aa52bb9527 199 Gene3D G3DSA:1.10.8.420 1 50 1.3E-16 T 13-10-2018 BEN78_13275 f2ec60cb6d288f86899476aa52bb9527 199 TIGRFAM TIGR00615 recR: recombination protein RecR 3 193 6.8E-68 T 13-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 BEN78_07015 994eb62106cffc7508280075a7d2101b 77 SUPERFAMILY SSF56601 2 57 7.03E-5 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BEN78_08370 73de924f297be718e697852093eb3765 229 Gene3D G3DSA:1.10.10.60 23 78 4.8E-22 T 13-10-2018 BEN78_08370 73de924f297be718e697852093eb3765 229 SUPERFAMILY SSF46689 23 104 3.59E-20 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN78_08370 73de924f297be718e697852093eb3765 229 Pfam PF00440 Bacterial regulatory proteins, tetR family 33 78 1.1E-17 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN78_08370 73de924f297be718e697852093eb3765 229 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 46 1.0E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN78_08370 73de924f297be718e697852093eb3765 229 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 54 77 1.0E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN78_08370 73de924f297be718e697852093eb3765 229 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 176 222 3.8E-11 T 13-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type BEN78_08370 73de924f297be718e697852093eb3765 229 Gene3D G3DSA:1.10.357.10 84 227 8.0E-27 T 13-10-2018 BEN78_12860 b209fa9f727c26802d29ec188abcaf5b 323 SUPERFAMILY SSF88697 260 317 7.21E-6 T 13-10-2018 IPR015947 PUA-like superfamily BEN78_12860 b209fa9f727c26802d29ec188abcaf5b 323 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 197 255 2.5E-17 T 13-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 BEN78_12860 b209fa9f727c26802d29ec188abcaf5b 323 SUPERFAMILY SSF55120 14 241 7.77E-69 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN78_12860 b209fa9f727c26802d29ec188abcaf5b 323 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 15 316 17.445 T 13-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN78_12860 b209fa9f727c26802d29ec188abcaf5b 323 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 37 196 1.6E-44 T 13-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 BEN78_12860 b209fa9f727c26802d29ec188abcaf5b 323 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 261 316 2.1E-9 T 13-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN78_12860 b209fa9f727c26802d29ec188abcaf5b 323 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 16 234 3.0E-64 T 13-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN78_12860 b209fa9f727c26802d29ec188abcaf5b 323 Gene3D G3DSA:3.30.2350.10 5 258 4.2E-78 T 13-10-2018 BEN78_04770 74076739596078faa4ace82cb5d0fc98 341 Gene3D G3DSA:3.40.47.10 5 181 5.9E-47 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 BEN78_04770 74076739596078faa4ace82cb5d0fc98 341 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 252 341 3.8E-25 T 13-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BEN78_04770 74076739596078faa4ace82cb5d0fc98 341 Gene3D G3DSA:3.40.47.10 182 341 8.2E-37 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 BEN78_04770 74076739596078faa4ace82cb5d0fc98 341 SUPERFAMILY SSF53901 12 341 1.04E-47 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 BEN78_04770 74076739596078faa4ace82cb5d0fc98 341 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 117 194 3.1E-18 T 13-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BEN78_01790 694dfae4d48ce5c83df7e8e6cb0f1650 151 SUPERFAMILY SSF49503 24 150 2.88E-40 T 13-10-2018 IPR008972 Cupredoxin BEN78_01790 694dfae4d48ce5c83df7e8e6cb0f1650 151 ProSitePatterns PS00196 Type-1 copper (blue) proteins signature. 127 143 - T 13-10-2018 IPR028871 Blue (type 1) copper protein, binding site BEN78_01790 694dfae4d48ce5c83df7e8e6cb0f1650 151 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 27 147 2.0E-36 T 13-10-2018 BEN78_01790 694dfae4d48ce5c83df7e8e6cb0f1650 151 Gene3D G3DSA:2.60.40.420 23 150 2.0E-41 T 13-10-2018 IPR008972 Cupredoxin BEN78_01790 694dfae4d48ce5c83df7e8e6cb0f1650 151 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 24 150 4.5E-24 T 13-10-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 BEN78_01790 694dfae4d48ce5c83df7e8e6cb0f1650 151 TIGRFAM TIGR02695 azurin: azurin 25 148 5.7E-51 T 13-10-2018 IPR014068 Azurin BEN78_13110 2c3884d70ec80bca769b709117169f81 92 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 2.3E-15 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BEN78_13110 2c3884d70ec80bca769b709117169f81 92 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 2.3E-15 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BEN78_13110 2c3884d70ec80bca769b709117169f81 92 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 2.3E-15 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BEN78_13110 2c3884d70ec80bca769b709117169f81 92 Pfam PF00216 Bacterial DNA-binding protein 4 92 2.0E-31 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BEN78_13110 2c3884d70ec80bca769b709117169f81 92 SMART SM00411 3 92 9.6E-41 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BEN78_13110 2c3884d70ec80bca769b709117169f81 92 Gene3D G3DSA:4.10.520.10 3 92 9.3E-35 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 BEN78_13110 2c3884d70ec80bca769b709117169f81 92 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 13-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 BEN78_13110 2c3884d70ec80bca769b709117169f81 92 SUPERFAMILY SSF47729 3 92 1.03E-30 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 BEN78_13795 c02ab89733eda37c4c94bbd0fd13ef05 311 Gene3D G3DSA:3.40.50.300 7 170 3.9E-40 T 13-10-2018 BEN78_13795 c02ab89733eda37c4c94bbd0fd13ef05 311 Pfam PF13177 DNA polymerase III, delta subunit 12 169 2.8E-28 T 13-10-2018 BEN78_13795 c02ab89733eda37c4c94bbd0fd13ef05 311 SUPERFAMILY SSF52540 10 207 8.65E-35 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_09750 71b6f9180665d4fda26da53bc15c2aa5 549 TIGRFAM TIGR00552 nadE: NAD+ synthetase 281 530 4.9E-58 T 13-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 BEN78_09750 71b6f9180665d4fda26da53bc15c2aa5 549 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 9 549 28.878 T 13-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 BEN78_09750 71b6f9180665d4fda26da53bc15c2aa5 549 Gene3D G3DSA:3.60.110.10 5 258 3.6E-85 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily BEN78_09750 71b6f9180665d4fda26da53bc15c2aa5 549 ProSitePatterns PS00920 Nitrilases / cyanide hydratase signature 1. 42 57 - T 13-10-2018 IPR000132 Nitrilase/cyanide hydratase, conserved site GO:0016810 BEN78_09750 71b6f9180665d4fda26da53bc15c2aa5 549 Gene3D G3DSA:3.40.50.620 272 549 5.6E-112 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_09750 71b6f9180665d4fda26da53bc15c2aa5 549 Pfam PF00795 Carbon-nitrogen hydrolase 10 254 1.7E-28 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 BEN78_09750 71b6f9180665d4fda26da53bc15c2aa5 549 Pfam PF02540 NAD synthase 274 524 1.5E-69 T 13-10-2018 IPR022310 NAD/GMP synthase BEN78_09750 71b6f9180665d4fda26da53bc15c2aa5 549 SUPERFAMILY SSF52402 273 532 3.09E-75 T 13-10-2018 BEN78_09750 71b6f9180665d4fda26da53bc15c2aa5 549 PIRSF PIRSF006630 6 549 1.8E-179 T 13-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 BEN78_09750 71b6f9180665d4fda26da53bc15c2aa5 549 SUPERFAMILY SSF56317 7 253 4.19E-63 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily BEN78_10905 38290d97e25bf307918cda43ae8634bb 219 Gene3D G3DSA:3.40.50.170 1 207 8.9E-73 T 13-10-2018 BEN78_10905 38290d97e25bf307918cda43ae8634bb 219 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 4 192 2.1E-66 T 13-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 BEN78_10905 38290d97e25bf307918cda43ae8634bb 219 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 4 189 29.281 T 13-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 BEN78_10905 38290d97e25bf307918cda43ae8634bb 219 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 135 158 - T 13-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BEN78_10905 38290d97e25bf307918cda43ae8634bb 219 Pfam PF00551 Formyl transferase 4 182 5.7E-53 T 13-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BEN78_10905 38290d97e25bf307918cda43ae8634bb 219 SUPERFAMILY SSF53328 3 197 1.44E-61 T 13-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BEN78_11745 8c46df8cce80360346ab943227e416d9 937 Pfam PF00593 TonB dependent receptor 461 936 2.2E-34 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_11745 8c46df8cce80360346ab943227e416d9 937 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 125 937 2.1E-171 T 13-10-2018 IPR010104 Bacterial TonB-dependent receptor BEN78_11745 8c46df8cce80360346ab943227e416d9 937 Gene3D G3DSA:2.60.40.1120 40 115 5.3E-8 T 13-10-2018 BEN78_11745 8c46df8cce80360346ab943227e416d9 937 Pfam PF07715 TonB-dependent Receptor Plug Domain 141 245 1.9E-14 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_11745 8c46df8cce80360346ab943227e416d9 937 SUPERFAMILY SSF56935 118 937 5.19E-92 T 13-10-2018 BEN78_11745 8c46df8cce80360346ab943227e416d9 937 Pfam PF13620 Carboxypeptidase regulatory-like domain 39 114 4.6E-12 T 13-10-2018 BEN78_11745 8c46df8cce80360346ab943227e416d9 937 SUPERFAMILY SSF49464 38 115 3.92E-11 T 13-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily BEN78_11745 8c46df8cce80360346ab943227e416d9 937 Gene3D G3DSA:2.170.130.10 123 251 1.8E-14 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_11745 8c46df8cce80360346ab943227e416d9 937 Gene3D G3DSA:2.40.170.20 309 937 5.4E-51 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_07885 12ffa03426a1ce1d0603d1d03c781214 793 SUPERFAMILY SSF82866 227 390 9.42E-17 T 13-10-2018 BEN78_07885 12ffa03426a1ce1d0603d1d03c781214 793 Pfam PF03176 MMPL family 188 391 1.4E-7 T 13-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 BEN78_07885 12ffa03426a1ce1d0603d1d03c781214 793 SUPERFAMILY SSF82866 616 776 1.7E-19 T 13-10-2018 BEN78_03560 4bebc054fdd623267f1935bfa61f1e3c 176 SUPERFAMILY SSF88946 3 103 4.32E-23 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BEN78_03560 4bebc054fdd623267f1935bfa61f1e3c 176 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 44 75 - T 13-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BEN78_03560 4bebc054fdd623267f1935bfa61f1e3c 176 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 168 2.2E-20 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BEN78_03560 4bebc054fdd623267f1935bfa61f1e3c 176 Gene3D G3DSA:1.10.1740.10 2 114 4.1E-24 T 13-10-2018 BEN78_03560 4bebc054fdd623267f1935bfa61f1e3c 176 Pfam PF08281 Sigma-70, region 4 114 165 7.0E-14 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BEN78_03560 4bebc054fdd623267f1935bfa61f1e3c 176 Pfam PF04542 Sigma-70 region 2 23 89 6.3E-15 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BEN78_03560 4bebc054fdd623267f1935bfa61f1e3c 176 SUPERFAMILY SSF88659 111 170 1.53E-13 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN78_03560 4bebc054fdd623267f1935bfa61f1e3c 176 Gene3D G3DSA:1.10.10.10 115 174 5.4E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_12975 32c9d0fd06a5c57c497386f81d7eab80 774 Pfam PF13567 Domain of unknown function (DUF4131) 24 181 1.5E-13 T 13-10-2018 IPR025405 Domain of unknown function DUF4131 BEN78_12975 32c9d0fd06a5c57c497386f81d7eab80 774 Pfam PF03772 Competence protein 219 488 2.1E-61 T 13-10-2018 IPR004477 ComEC/Rec2-related protein BEN78_12975 32c9d0fd06a5c57c497386f81d7eab80 774 Gene3D G3DSA:3.60.15.10 513 745 4.9E-41 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN78_12975 32c9d0fd06a5c57c497386f81d7eab80 774 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 241 418 1.7E-27 T 13-10-2018 IPR004477 ComEC/Rec2-related protein BEN78_12975 32c9d0fd06a5c57c497386f81d7eab80 774 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 140 738 1.4E-84 T 13-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 BEN78_12975 32c9d0fd06a5c57c497386f81d7eab80 774 SMART SM00849 524 709 2.5E-9 T 13-10-2018 IPR001279 Metallo-beta-lactamase BEN78_12975 32c9d0fd06a5c57c497386f81d7eab80 774 Pfam PF00753 Metallo-beta-lactamase superfamily 521 688 2.4E-12 T 13-10-2018 IPR001279 Metallo-beta-lactamase BEN78_12975 32c9d0fd06a5c57c497386f81d7eab80 774 SUPERFAMILY SSF56281 513 762 1.27E-40 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN78_01470 aa193da2228139ca6184615d0edd8a8a 245 Gene3D G3DSA:3.10.290.10 3 61 1.6E-10 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BEN78_01470 aa193da2228139ca6184615d0edd8a8a 245 SUPERFAMILY SSF55174 6 102 1.57E-10 T 13-10-2018 BEN78_01470 aa193da2228139ca6184615d0edd8a8a 245 Pfam PF01479 S4 domain 15 51 1.5E-6 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_01470 aa193da2228139ca6184615d0edd8a8a 245 SUPERFAMILY SSF55120 65 241 5.92E-25 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN78_01470 aa193da2228139ca6184615d0edd8a8a 245 Gene3D G3DSA:3.30.2350.10 62 244 1.9E-28 T 13-10-2018 BEN78_01470 aa193da2228139ca6184615d0edd8a8a 245 SMART SM00363 5 63 4.3E-4 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_07690 90608b8aece80637402792334eea45cd 399 Pfam PF07690 Major Facilitator Superfamily 21 330 5.0E-37 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN78_07690 90608b8aece80637402792334eea45cd 399 SUPERFAMILY SSF103473 6 394 2.49E-62 T 13-10-2018 IPR036259 MFS transporter superfamily BEN78_07690 90608b8aece80637402792334eea45cd 399 Gene3D G3DSA:1.20.1250.20 208 394 7.1E-20 T 13-10-2018 BEN78_07690 90608b8aece80637402792334eea45cd 399 Gene3D G3DSA:1.20.1250.20 14 203 2.1E-32 T 13-10-2018 BEN78_10255 2f1743c9c5858b2047a87e89d905322c 439 SUPERFAMILY SSF54534 171 275 7.85E-24 T 13-10-2018 BEN78_10255 2f1743c9c5858b2047a87e89d905322c 439 Gene3D G3DSA:3.10.50.40 170 273 1.1E-71 T 13-10-2018 BEN78_10255 2f1743c9c5858b2047a87e89d905322c 439 Pfam PF09312 SurA N-terminal domain 27 144 9.4E-42 T 13-10-2018 IPR015391 SurA N-terminal BEN78_10255 2f1743c9c5858b2047a87e89d905322c 439 Pfam PF13616 PPIC-type PPIASE domain 286 379 5.6E-26 T 13-10-2018 BEN78_10255 2f1743c9c5858b2047a87e89d905322c 439 Gene3D G3DSA:3.10.50.40 280 419 2.2E-32 T 13-10-2018 BEN78_10255 2f1743c9c5858b2047a87e89d905322c 439 Hamap MF_01183 Chaperone SurA [surA]. 4 428 30.733 T 13-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 BEN78_10255 2f1743c9c5858b2047a87e89d905322c 439 Pfam PF00639 PPIC-type PPIASE domain 176 270 3.1E-17 T 13-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 BEN78_10255 2f1743c9c5858b2047a87e89d905322c 439 SUPERFAMILY SSF54534 285 382 1.11E-25 T 13-10-2018 BEN78_10255 2f1743c9c5858b2047a87e89d905322c 439 Gene3D G3DSA:1.10.4030.30 28 276 1.1E-71 T 13-10-2018 BEN78_10255 2f1743c9c5858b2047a87e89d905322c 439 SUPERFAMILY SSF109998 27 199 1.8E-44 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily BEN78_14520 1e2fd7b9bbaef044284cc6609c58e865 463 SMART SM00382 177 361 6.2E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_14520 1e2fd7b9bbaef044284cc6609c58e865 463 Gene3D G3DSA:3.40.50.12240 37 458 2.2E-145 T 13-10-2018 BEN78_14520 1e2fd7b9bbaef044284cc6609c58e865 463 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 165 376 4.4E-72 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BEN78_14520 1e2fd7b9bbaef044284cc6609c58e865 463 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 40 456 1.6E-167 T 13-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BEN78_14520 1e2fd7b9bbaef044284cc6609c58e865 463 SUPERFAMILY SSF52540 113 380 2.35E-93 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_12115 9fdb3b1ef2adf4325256d26f2a0ad040 496 Gene3D G3DSA:3.40.630.40 243 474 3.9E-73 T 13-10-2018 BEN78_12115 9fdb3b1ef2adf4325256d26f2a0ad040 496 Pfam PF11741 AMIN domain 38 128 5.3E-15 T 13-10-2018 IPR021731 AMIN domain BEN78_12115 9fdb3b1ef2adf4325256d26f2a0ad040 496 SUPERFAMILY SSF53187 251 469 1.88E-51 T 13-10-2018 BEN78_12115 9fdb3b1ef2adf4325256d26f2a0ad040 496 SMART SM00646 313 466 2.2E-55 T 13-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 BEN78_12115 9fdb3b1ef2adf4325256d26f2a0ad040 496 Gene3D G3DSA:2.60.40.3500 23 132 3.5E-20 T 13-10-2018 BEN78_12115 9fdb3b1ef2adf4325256d26f2a0ad040 496 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 253 466 5.7E-49 T 13-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 BEN78_05840 c616a2894af2ec611dc306a3dc0fe3c9 134 Pfam PF03061 Thioesterase superfamily 28 99 1.2E-18 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 BEN78_05840 c616a2894af2ec611dc306a3dc0fe3c9 134 SUPERFAMILY SSF54637 7 130 4.04E-39 T 13-10-2018 IPR029069 HotDog domain superfamily BEN78_05840 c616a2894af2ec611dc306a3dc0fe3c9 134 Gene3D G3DSA:3.10.129.10 2 133 8.0E-44 T 13-10-2018 BEN78_13725 018c737cf8e1d1697e2aed9a5768c1c3 81 Pfam PF04023 FeoA domain 2 76 1.4E-16 T 13-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 BEN78_13725 018c737cf8e1d1697e2aed9a5768c1c3 81 Gene3D G3DSA:2.30.30.90 1 79 1.0E-24 T 13-10-2018 IPR038157 Ferrous iron transporter, core domain BEN78_13725 018c737cf8e1d1697e2aed9a5768c1c3 81 SMART SM00899 1 77 7.4E-17 T 13-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 BEN78_13725 018c737cf8e1d1697e2aed9a5768c1c3 81 SUPERFAMILY SSF50037 16 75 7.55E-14 T 13-10-2018 IPR008988 Transcriptional repressor, C-terminal BEN78_04420 f2da2b85bef18c4f0887b3f5e4596586 1059 SUPERFAMILY SSF82714 192 274 1.57E-16 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN78_04420 f2da2b85bef18c4f0887b3f5e4596586 1059 Gene3D G3DSA:3.30.70.1430 42 839 4.6E-291 T 13-10-2018 BEN78_04420 f2da2b85bef18c4f0887b3f5e4596586 1059 Gene3D G3DSA:1.20.1640.10 13 515 4.6E-291 T 13-10-2018 BEN78_04420 f2da2b85bef18c4f0887b3f5e4596586 1059 Gene3D G3DSA:1.20.1640.10 516 1044 4.6E-291 T 13-10-2018 BEN78_04420 f2da2b85bef18c4f0887b3f5e4596586 1059 Pfam PF00873 AcrB/AcrD/AcrF family 5 1046 0.0 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_04420 f2da2b85bef18c4f0887b3f5e4596586 1059 SUPERFAMILY SSF82693 567 667 6.98E-6 T 13-10-2018 BEN78_04420 f2da2b85bef18c4f0887b3f5e4596586 1059 Gene3D G3DSA:3.30.70.1430 570 671 4.6E-291 T 13-10-2018 BEN78_04420 f2da2b85bef18c4f0887b3f5e4596586 1059 SUPERFAMILY SSF82693 42 128 2.96E-23 T 13-10-2018 BEN78_04420 f2da2b85bef18c4f0887b3f5e4596586 1059 Gene3D G3DSA:3.30.2090.10 189 280 4.6E-291 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN78_04420 f2da2b85bef18c4f0887b3f5e4596586 1059 SUPERFAMILY SSF82693 155 333 8.37E-18 T 13-10-2018 BEN78_04420 f2da2b85bef18c4f0887b3f5e4596586 1059 PRINTS PR00702 Acriflavin resistance protein family signature 480 503 1.7E-23 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_04420 f2da2b85bef18c4f0887b3f5e4596586 1059 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 1.7E-23 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_04420 f2da2b85bef18c4f0887b3f5e4596586 1059 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 1.7E-23 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_04420 f2da2b85bef18c4f0887b3f5e4596586 1059 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.7E-23 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_04420 f2da2b85bef18c4f0887b3f5e4596586 1059 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 1.7E-23 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_04420 f2da2b85bef18c4f0887b3f5e4596586 1059 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.7E-23 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN78_04420 f2da2b85bef18c4f0887b3f5e4596586 1059 SUPERFAMILY SSF82866 299 508 1.15E-31 T 13-10-2018 BEN78_04420 f2da2b85bef18c4f0887b3f5e4596586 1059 SUPERFAMILY SSF82714 725 825 5.89E-14 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN78_04420 f2da2b85bef18c4f0887b3f5e4596586 1059 SUPERFAMILY SSF82866 827 1052 1.96E-53 T 13-10-2018 BEN78_04420 f2da2b85bef18c4f0887b3f5e4596586 1059 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1056 0.0 T 13-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 BEN78_04420 f2da2b85bef18c4f0887b3f5e4596586 1059 Gene3D G3DSA:3.30.70.1320 136 333 4.6E-291 T 13-10-2018 BEN78_04420 f2da2b85bef18c4f0887b3f5e4596586 1059 Gene3D G3DSA:3.30.2090.10 726 831 4.6E-291 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN78_04420 f2da2b85bef18c4f0887b3f5e4596586 1059 Gene3D G3DSA:3.30.70.1440 672 890 4.6E-291 T 13-10-2018 BEN78_09830 fac6c9210f490d1133b9457edff773c8 242 Pfam PF01138 3' exoribonuclease family, domain 1 14 144 1.9E-22 T 13-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BEN78_09830 fac6c9210f490d1133b9457edff773c8 242 SUPERFAMILY SSF55666 158 240 2.75E-23 T 13-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BEN78_09830 fac6c9210f490d1133b9457edff773c8 242 Pfam PF03725 3' exoribonuclease family, domain 2 162 227 3.0E-7 T 13-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BEN78_09830 fac6c9210f490d1133b9457edff773c8 242 ProSitePatterns PS01277 Ribonuclease PH signature. 120 133 - T 13-10-2018 IPR018336 Ribonuclease PH, conserved site BEN78_09830 fac6c9210f490d1133b9457edff773c8 242 SUPERFAMILY SSF54211 3 185 8.1E-46 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BEN78_09830 fac6c9210f490d1133b9457edff773c8 242 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 6 240 3.2E-114 T 13-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 BEN78_09830 fac6c9210f490d1133b9457edff773c8 242 Gene3D G3DSA:3.30.230.70 14 242 2.7E-60 T 13-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BEN78_09830 fac6c9210f490d1133b9457edff773c8 242 Hamap MF_00564 Ribonuclease PH [rph]. 15 241 44.566 T 13-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 BEN78_13765 5ff1a17958dcf2aeeb6006dc46d9f35f 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 13-10-2018 IPR020610 Thiolase, active site GO:0016747 BEN78_13765 5ff1a17958dcf2aeeb6006dc46d9f35f 391 Gene3D G3DSA:3.40.47.10 5 274 1.7E-138 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 BEN78_13765 5ff1a17958dcf2aeeb6006dc46d9f35f 391 Gene3D G3DSA:3.40.47.10 126 387 1.7E-138 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 BEN78_13765 5ff1a17958dcf2aeeb6006dc46d9f35f 391 Pfam PF00108 Thiolase, N-terminal domain 4 260 1.6E-83 T 13-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 BEN78_13765 5ff1a17958dcf2aeeb6006dc46d9f35f 391 Pfam PF02803 Thiolase, C-terminal domain 268 389 6.9E-45 T 13-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 BEN78_13765 5ff1a17958dcf2aeeb6006dc46d9f35f 391 SUPERFAMILY SSF53901 269 390 2.88E-42 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 BEN78_13765 5ff1a17958dcf2aeeb6006dc46d9f35f 391 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 13-10-2018 IPR020613 Thiolase, conserved site GO:0016747 BEN78_13765 5ff1a17958dcf2aeeb6006dc46d9f35f 391 PIRSF PIRSF000429 1 391 2.7E-110 T 13-10-2018 IPR002155 Thiolase GO:0016747 BEN78_13765 5ff1a17958dcf2aeeb6006dc46d9f35f 391 SUPERFAMILY SSF53901 3 268 4.37E-76 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 BEN78_13765 5ff1a17958dcf2aeeb6006dc46d9f35f 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 13-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 BEN78_13765 5ff1a17958dcf2aeeb6006dc46d9f35f 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 389 2.1E-122 T 13-10-2018 IPR002155 Thiolase GO:0016747 BEN78_03040 4361e56378b01ed761cacfb719a920b0 157 Hamap MF_00598 Protein Smg [smg]. 5 157 29.598 T 13-10-2018 IPR007456 Smg BEN78_03040 4361e56378b01ed761cacfb719a920b0 157 Pfam PF04361 Protein of unknown function (DUF494) 5 157 6.6E-54 T 13-10-2018 IPR007456 Smg BEN78_13250 0cbdd89f101f5b47aba107aeb9726322 261 Pfam PF14355 Abortive infection C-terminus 177 246 3.8E-11 T 13-10-2018 IPR026001 Abortive infection protein-like, C-terminal domain BEN78_06820 895fe30c6a66211dfae51d968fb7d741 340 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 191 212 - T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BEN78_06820 895fe30c6a66211dfae51d968fb7d741 340 Gene3D G3DSA:3.40.50.720 1 190 2.5E-61 T 13-10-2018 BEN78_06820 895fe30c6a66211dfae51d968fb7d741 340 SUPERFAMILY SSF51735 8 183 2.38E-52 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_06820 895fe30c6a66211dfae51d968fb7d741 340 Gene3D G3DSA:1.10.1040.10 192 340 9.6E-47 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BEN78_06820 895fe30c6a66211dfae51d968fb7d741 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 9.9E-44 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BEN78_06820 895fe30c6a66211dfae51d968fb7d741 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 9.9E-44 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BEN78_06820 895fe30c6a66211dfae51d968fb7d741 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 60 87 9.9E-44 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BEN78_06820 895fe30c6a66211dfae51d968fb7d741 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 201 225 9.9E-44 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BEN78_06820 895fe30c6a66211dfae51d968fb7d741 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 176 200 9.9E-44 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BEN78_06820 895fe30c6a66211dfae51d968fb7d741 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 241 258 9.9E-44 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BEN78_06820 895fe30c6a66211dfae51d968fb7d741 340 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 8 163 1.6E-52 T 13-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BEN78_06820 895fe30c6a66211dfae51d968fb7d741 340 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 6 325 38.822 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BEN78_06820 895fe30c6a66211dfae51d968fb7d741 340 SUPERFAMILY SSF48179 182 335 1.41E-48 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BEN78_06820 895fe30c6a66211dfae51d968fb7d741 340 PIRSF PIRSF000114 1 335 9.7E-97 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BEN78_06820 895fe30c6a66211dfae51d968fb7d741 340 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 183 322 9.6E-45 T 13-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BEN78_12475 2e83cb385640a64925ee446f4940e958 86 Pfam PF00886 Ribosomal protein S16 8 68 5.3E-25 T 13-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_12475 2e83cb385640a64925ee446f4940e958 86 Gene3D G3DSA:3.30.1320.10 1 85 1.1E-31 T 13-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_12475 2e83cb385640a64925ee446f4940e958 86 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.818 T 13-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_12475 2e83cb385640a64925ee446f4940e958 86 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 13-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_12475 2e83cb385640a64925ee446f4940e958 86 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 3.6E-31 T 13-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_12475 2e83cb385640a64925ee446f4940e958 86 SUPERFAMILY SSF54565 1 80 8.24E-30 T 13-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_10865 f7a32b1ee33df71154213c60577319b0 187 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 9 179 6.6E-39 T 13-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 BEN78_10865 f7a32b1ee33df71154213c60577319b0 187 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 10 178 1.0E-33 T 13-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related BEN78_10865 f7a32b1ee33df71154213c60577319b0 187 Gene3D G3DSA:2.60.450.10 58 187 3.6E-10 T 13-10-2018 BEN78_06105 d734bfbe5a70ce2889bb762714f37034 153 Gene3D G3DSA:1.10.10.10 2 141 3.1E-38 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_06105 d734bfbe5a70ce2889bb762714f37034 153 Pfam PF02082 Transcriptional regulator 1 81 1.2E-21 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type BEN78_06105 d734bfbe5a70ce2889bb762714f37034 153 SUPERFAMILY SSF46785 6 131 6.92E-30 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_01145 2bdadeb43d34f40c1758cd1927ce3684 115 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 93 31.809 T 13-10-2018 IPR023081 Cell division protein FtsB BEN78_01145 2bdadeb43d34f40c1758cd1927ce3684 115 Pfam PF04977 Septum formation initiator 14 92 1.5E-28 T 13-10-2018 IPR007060 Septum formation initiator FtsL/DivIC BEN78_04425 e3bb64666716d7d2fd26898d5a99c20a 404 SUPERFAMILY SSF103473 14 394 2.75E-49 T 13-10-2018 IPR036259 MFS transporter superfamily BEN78_04425 e3bb64666716d7d2fd26898d5a99c20a 404 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 16 390 2.3E-94 T 13-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 BEN78_04425 e3bb64666716d7d2fd26898d5a99c20a 404 Pfam PF07690 Major Facilitator Superfamily 26 353 1.6E-37 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN78_04425 e3bb64666716d7d2fd26898d5a99c20a 404 Gene3D G3DSA:1.20.1720.10 16 391 3.2E-75 T 13-10-2018 BEN78_01600 d3be10c3e161f1c470c0cee25c3f32cb 122 Gene3D G3DSA:3.40.50.10600 5 120 2.2E-8 T 13-10-2018 IPR038396 SpoIIAA-like superfamily BEN78_01600 d3be10c3e161f1c470c0cee25c3f32cb 122 SUPERFAMILY SSF52091 4 120 1.45E-16 T 13-10-2018 IPR036513 STAS domain superfamily BEN78_01600 d3be10c3e161f1c470c0cee25c3f32cb 122 Pfam PF11964 SpoIIAA-like 12 120 2.3E-8 T 13-10-2018 IPR021866 SpoIIAA-like BEN78_06745 1111f44cff1e6fbaf450c57ffdc5dbf0 423 Pfam PF07219 HemY protein N-terminus 30 130 1.4E-16 T 13-10-2018 IPR010817 HemY, N-terminal BEN78_06745 1111f44cff1e6fbaf450c57ffdc5dbf0 423 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 7 377 1.5E-48 T 13-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 BEN78_06745 1111f44cff1e6fbaf450c57ffdc5dbf0 423 Gene3D G3DSA:1.25.40.10 91 392 5.5E-11 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_06745 1111f44cff1e6fbaf450c57ffdc5dbf0 423 SUPERFAMILY SSF48452 80 151 9.28E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_06745 1111f44cff1e6fbaf450c57ffdc5dbf0 423 SUPERFAMILY SSF48452 264 384 6.83E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_04040 aa832759b1de96aea7436e77f9067753 1228 SUPERFAMILY SSF56935 829 950 7.69E-5 T 13-10-2018 BEN78_04040 aa832759b1de96aea7436e77f9067753 1228 Gene3D G3DSA:2.40.160.10 802 964 2.3E-6 T 13-10-2018 IPR023614 Porin domain superfamily BEN78_08105 7c5ef0929c7635ccf3e6453af5825cef 90 SUPERFAMILY SSF160191 1 77 8.24E-27 T 13-10-2018 IPR038068 YcgL-like superfamily BEN78_08105 7c5ef0929c7635ccf3e6453af5825cef 90 Hamap MF_01866 Protein YcgL [ycgL]. 1 82 20.941 T 13-10-2018 IPR027354 YcgL domain BEN78_08105 7c5ef0929c7635ccf3e6453af5825cef 90 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 5 74 7.0E-17 T 13-10-2018 IPR027354 YcgL domain BEN78_08105 7c5ef0929c7635ccf3e6453af5825cef 90 Gene3D G3DSA:3.10.510.20 1 74 4.8E-26 T 13-10-2018 IPR038068 YcgL-like superfamily BEN78_08105 7c5ef0929c7635ccf3e6453af5825cef 90 Pfam PF05166 YcgL domain 4 75 6.6E-28 T 13-10-2018 IPR027354 YcgL domain BEN78_12530 18a016aca6a46e35c9a32010d58cfb41 751 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 274 284 - T 13-10-2018 IPR019793 Peroxidases heam-ligand binding site Reactome: R-HSA-2408557 BEN78_12530 18a016aca6a46e35c9a32010d58cfb41 751 Gene3D G3DSA:1.10.420.10 603 726 4.4E-146 T 13-10-2018 BEN78_12530 18a016aca6a46e35c9a32010d58cfb41 751 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 6 750 0.0 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 BEN78_12530 18a016aca6a46e35c9a32010d58cfb41 751 SUPERFAMILY SSF48113 445 750 3.98E-108 T 13-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 BEN78_12530 18a016aca6a46e35c9a32010d58cfb41 751 Hamap MF_01961 Catalase-peroxidase [katG]. 2 751 41.958 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 BEN78_12530 18a016aca6a46e35c9a32010d58cfb41 751 Gene3D G3DSA:1.10.520.10 448 750 4.4E-146 T 13-10-2018 BEN78_12530 18a016aca6a46e35c9a32010d58cfb41 751 PRINTS PR00458 Haem peroxidase superfamily signature 144 161 6.8E-14 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 BEN78_12530 18a016aca6a46e35c9a32010d58cfb41 751 PRINTS PR00458 Haem peroxidase superfamily signature 162 174 6.8E-14 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 BEN78_12530 18a016aca6a46e35c9a32010d58cfb41 751 PRINTS PR00458 Haem peroxidase superfamily signature 333 348 6.8E-14 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 BEN78_12530 18a016aca6a46e35c9a32010d58cfb41 751 PRINTS PR00458 Haem peroxidase superfamily signature 84 98 6.8E-14 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 BEN78_12530 18a016aca6a46e35c9a32010d58cfb41 751 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 20 42 7.6E-56 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 BEN78_12530 18a016aca6a46e35c9a32010d58cfb41 751 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 495 521 7.6E-56 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 BEN78_12530 18a016aca6a46e35c9a32010d58cfb41 751 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 61 86 7.6E-56 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 BEN78_12530 18a016aca6a46e35c9a32010d58cfb41 751 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 46 59 7.6E-56 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 BEN78_12530 18a016aca6a46e35c9a32010d58cfb41 751 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 282 305 7.6E-56 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 BEN78_12530 18a016aca6a46e35c9a32010d58cfb41 751 Gene3D G3DSA:1.10.520.10 14 445 7.5E-220 T 13-10-2018 BEN78_12530 18a016aca6a46e35c9a32010d58cfb41 751 Pfam PF00141 Peroxidase 65 410 1.3E-45 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 BEN78_12530 18a016aca6a46e35c9a32010d58cfb41 751 Pfam PF00141 Peroxidase 417 725 1.8E-37 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 BEN78_12530 18a016aca6a46e35c9a32010d58cfb41 751 ProSitePatterns PS00436 Peroxidases active site signature. 84 95 - T 13-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 BEN78_12530 18a016aca6a46e35c9a32010d58cfb41 751 Gene3D G3DSA:1.10.420.20 185 412 7.5E-220 T 13-10-2018 BEN78_12530 18a016aca6a46e35c9a32010d58cfb41 751 SUPERFAMILY SSF48113 12 444 3.25E-148 T 13-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 BEN78_13125 fbda543ffb27f99e5b5b30d287d333f8 255 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 253 5.4E-94 T 13-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 BEN78_13125 fbda543ffb27f99e5b5b30d287d333f8 255 Pfam PF00753 Metallo-beta-lactamase superfamily 15 164 3.4E-19 T 13-10-2018 IPR001279 Metallo-beta-lactamase BEN78_13125 fbda543ffb27f99e5b5b30d287d333f8 255 PIRSF PIRSF005457 1 253 3.5E-89 T 13-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 BEN78_13125 fbda543ffb27f99e5b5b30d287d333f8 255 SUPERFAMILY SSF56281 1 254 9.7E-66 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN78_13125 fbda543ffb27f99e5b5b30d287d333f8 255 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 253 40.902 T 13-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 BEN78_13125 fbda543ffb27f99e5b5b30d287d333f8 255 SMART SM00849 11 164 7.8E-29 T 13-10-2018 IPR001279 Metallo-beta-lactamase BEN78_13125 fbda543ffb27f99e5b5b30d287d333f8 255 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 165 253 3.7E-24 T 13-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 BEN78_13125 fbda543ffb27f99e5b5b30d287d333f8 255 Gene3D G3DSA:3.60.15.10 1 253 2.0E-80 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN78_13355 f74dc0b6f9198c2e9f4c76e94de29769 278 Gene3D G3DSA:1.10.3720.10 5 269 1.5E-66 T 13-10-2018 IPR035906 MetI-like superfamily BEN78_13355 f74dc0b6f9198c2e9f4c76e94de29769 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 264 6.7E-22 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN78_13355 f74dc0b6f9198c2e9f4c76e94de29769 278 SUPERFAMILY SSF161098 8 278 1.87E-72 T 13-10-2018 IPR035906 MetI-like superfamily BEN78_13000 76d5316a7ec9fe41b41d7c7439d18e92 543 Gene3D G3DSA:3.20.20.70 124 501 9.9E-110 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_13000 76d5316a7ec9fe41b41d7c7439d18e92 543 Pfam PF01645 Conserved region in glutamate synthase 146 470 4.6E-84 T 13-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 BEN78_13000 76d5316a7ec9fe41b41d7c7439d18e92 543 SUPERFAMILY SSF51395 19 511 1.83E-134 T 13-10-2018 BEN78_13000 76d5316a7ec9fe41b41d7c7439d18e92 543 PIRSF PIRSF500060 9 527 9.2E-217 T 13-10-2018 IPR027283 Glutamate synthase large subunit-like protein, bacteria BEN78_13000 76d5316a7ec9fe41b41d7c7439d18e92 543 PIRSF PIRSF006429 2 532 4.1E-155 T 13-10-2018 IPR024188 Glutamate synthase large subunit-like protein BEN78_01040 0d99ec91d67c88b93f64c8a5cfc82692 158 Pfam PF00583 Acetyltransferase (GNAT) family 26 126 9.2E-17 T 13-10-2018 IPR000182 GNAT domain BEN78_01040 0d99ec91d67c88b93f64c8a5cfc82692 158 SUPERFAMILY SSF55729 1 151 2.36E-29 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN78_01040 0d99ec91d67c88b93f64c8a5cfc82692 158 Gene3D G3DSA:3.40.630.30 1 148 1.3E-25 T 13-10-2018 BEN78_01695 ecbb12177847f002a3afd026da5ba878 157 Pfam PF03168 Late embryogenesis abundant protein 48 130 1.5E-9 T 13-10-2018 IPR004864 Late embryogenesis abundant protein, LEA_2 subgroup BEN78_01695 ecbb12177847f002a3afd026da5ba878 157 SUPERFAMILY SSF117070 10 126 1.03E-9 T 13-10-2018 BEN78_09840 1bae5f62b64c4d64cfa4a44026d7e423 994 Gene3D G3DSA:3.55.50.30 32 104 1.4E-13 T 13-10-2018 BEN78_09840 1bae5f62b64c4d64cfa4a44026d7e423 994 SUPERFAMILY SSF56935 129 994 6.54E-81 T 13-10-2018 BEN78_09840 1bae5f62b64c4d64cfa4a44026d7e423 994 Pfam PF00593 TonB dependent receptor 457 993 8.7E-34 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_09840 1bae5f62b64c4d64cfa4a44026d7e423 994 Pfam PF07715 TonB-dependent Receptor Plug Domain 146 252 2.7E-15 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_09840 1bae5f62b64c4d64cfa4a44026d7e423 994 SMART SM00965 56 106 7.1E-6 T 13-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 BEN78_09840 1bae5f62b64c4d64cfa4a44026d7e423 994 Gene3D G3DSA:2.170.130.10 125 256 8.4E-24 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_00275 53809ea99a3bab7643d7972a02f85a0c 298 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 22 277 4.5E-98 T 13-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 BEN78_00275 53809ea99a3bab7643d7972a02f85a0c 298 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 56 69 - T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BEN78_00275 53809ea99a3bab7643d7972a02f85a0c 298 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 22 37 - T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BEN78_00275 53809ea99a3bab7643d7972a02f85a0c 298 Pfam PF00809 Pterin binding enzyme 23 263 6.5E-83 T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BEN78_00275 53809ea99a3bab7643d7972a02f85a0c 298 Gene3D G3DSA:3.20.20.20 2 285 1.9E-111 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BEN78_00275 53809ea99a3bab7643d7972a02f85a0c 298 SUPERFAMILY SSF51717 10 278 3.92E-101 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BEN78_11930 cafb1852c67ebfbae4373faf89289cd0 457 Pfam PF00675 Insulinase (Peptidase family M16) 28 149 1.4E-17 T 13-10-2018 IPR011765 Peptidase M16, N-terminal BEN78_11930 cafb1852c67ebfbae4373faf89289cd0 457 SUPERFAMILY SSF63411 15 222 1.43E-46 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BEN78_11930 cafb1852c67ebfbae4373faf89289cd0 457 SUPERFAMILY SSF63411 254 435 7.17E-27 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BEN78_11930 cafb1852c67ebfbae4373faf89289cd0 457 Gene3D G3DSA:3.30.830.10 236 441 2.4E-39 T 13-10-2018 BEN78_11930 cafb1852c67ebfbae4373faf89289cd0 457 Gene3D G3DSA:3.30.830.10 14 234 6.9E-59 T 13-10-2018 BEN78_11930 cafb1852c67ebfbae4373faf89289cd0 457 Pfam PF05193 Peptidase M16 inactive domain 184 368 7.3E-27 T 13-10-2018 IPR007863 Peptidase M16, C-terminal BEN78_08175 5243a47787aee678c5726c2b9c3375c5 82 Gene3D G3DSA:1.10.260.40 2 82 4.7E-29 T 13-10-2018 BEN78_08175 5243a47787aee678c5726c2b9c3375c5 82 SUPERFAMILY SSF47413 14 77 1.32E-12 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN78_08175 5243a47787aee678c5726c2b9c3375c5 82 SMART SM00530 17 72 3.0E-7 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN78_08175 5243a47787aee678c5726c2b9c3375c5 82 Pfam PF13560 Helix-turn-helix domain 16 68 1.0E-8 T 13-10-2018 BEN78_11215 bfbccfad673760e751d74a473f116d64 174 Gene3D G3DSA:1.20.1550.10 5 169 1.2E-46 T 13-10-2018 IPR023380 DsbB-like superfamily BEN78_11215 bfbccfad673760e751d74a473f116d64 174 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 4 167 21.084 T 13-10-2018 IPR022920 Disulphide bond formation protein DsbB BEN78_11215 bfbccfad673760e751d74a473f116d64 174 SUPERFAMILY SSF158442 13 160 8.5E-40 T 13-10-2018 IPR023380 DsbB-like superfamily BEN78_11215 bfbccfad673760e751d74a473f116d64 174 Pfam PF02600 Disulfide bond formation protein DsbB 11 159 1.6E-38 T 13-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 BEN78_12730 dcbf6704c28a218db96c1069a9195e47 145 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 4 72 6.7E-22 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BEN78_12730 dcbf6704c28a218db96c1069a9195e47 145 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 3.3E-29 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BEN78_12730 dcbf6704c28a218db96c1069a9195e47 145 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 3.3E-29 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BEN78_12730 dcbf6704c28a218db96c1069a9195e47 145 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 3.3E-29 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BEN78_12730 dcbf6704c28a218db96c1069a9195e47 145 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 3.3E-29 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BEN78_12730 dcbf6704c28a218db96c1069a9195e47 145 Pfam PF03840 Preprotein translocase SecG subunit 5 71 6.4E-19 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BEN78_06575 6ecc7b3dacf70f288385b931c0496867 308 Gene3D G3DSA:1.10.10.10 1 87 1.6E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_06575 6ecc7b3dacf70f288385b931c0496867 308 Gene3D G3DSA:3.40.190.10 90 294 9.3E-58 T 13-10-2018 BEN78_06575 6ecc7b3dacf70f288385b931c0496867 308 SUPERFAMILY SSF53850 90 298 6.88E-39 T 13-10-2018 BEN78_06575 6ecc7b3dacf70f288385b931c0496867 308 Gene3D G3DSA:3.40.190.10 172 270 9.3E-58 T 13-10-2018 BEN78_06575 6ecc7b3dacf70f288385b931c0496867 308 SUPERFAMILY SSF46785 4 85 1.8E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_06575 6ecc7b3dacf70f288385b931c0496867 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 4.9E-15 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_06575 6ecc7b3dacf70f288385b931c0496867 308 Pfam PF03466 LysR substrate binding domain 95 298 1.9E-20 T 13-10-2018 IPR005119 LysR, substrate-binding BEN78_04960 b647c7ab5fe922d02da2ecfa9f70af50 226 SUPERFAMILY SSF159270 37 220 1.44E-40 T 13-10-2018 IPR023373 YmcC-like superfamily BEN78_04960 b647c7ab5fe922d02da2ecfa9f70af50 226 Gene3D G3DSA:2.40.360.10 31 225 4.9E-42 T 13-10-2018 IPR023373 YmcC-like superfamily BEN78_04960 b647c7ab5fe922d02da2ecfa9f70af50 226 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 26 210 1.3E-44 T 13-10-2018 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB BEN78_12535 93248e3b2a61a87f6203fcdcc876f784 865 Gene3D G3DSA:3.40.50.300 568 820 1.6E-94 T 13-10-2018 BEN78_12535 93248e3b2a61a87f6203fcdcc876f784 865 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 692 708 - T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 BEN78_12535 93248e3b2a61a87f6203fcdcc876f784 865 Pfam PF05188 MutS domain II 128 252 2.6E-27 T 13-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 BEN78_12535 93248e3b2a61a87f6203fcdcc876f784 865 PIRSF PIRSF037677 219 820 5.6E-120 T 13-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 BEN78_12535 93248e3b2a61a87f6203fcdcc876f784 865 PIRSF PIRSF037677 2 181 1.6E-28 T 13-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 BEN78_12535 93248e3b2a61a87f6203fcdcc876f784 865 Gene3D G3DSA:3.40.1170.10 1 120 4.1E-50 T 13-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 BEN78_12535 93248e3b2a61a87f6203fcdcc876f784 865 SUPERFAMILY SSF52540 566 807 2.63E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_12535 93248e3b2a61a87f6203fcdcc876f784 865 Pfam PF01624 MutS domain I 7 118 7.1E-42 T 13-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 BEN78_12535 93248e3b2a61a87f6203fcdcc876f784 865 Gene3D G3DSA:1.10.1420.10 266 558 6.4E-96 T 13-10-2018 BEN78_12535 93248e3b2a61a87f6203fcdcc876f784 865 Gene3D G3DSA:1.10.1420.10 386 502 6.4E-96 T 13-10-2018 BEN78_12535 93248e3b2a61a87f6203fcdcc876f784 865 SMART SM00534 611 803 1.4E-110 T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 BEN78_12535 93248e3b2a61a87f6203fcdcc876f784 865 SMART SM00533 283 590 1.3E-91 T 13-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 BEN78_12535 93248e3b2a61a87f6203fcdcc876f784 865 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 6 862 0.0 T 13-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 BEN78_12535 93248e3b2a61a87f6203fcdcc876f784 865 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 6 857 24.416 T 13-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 BEN78_12535 93248e3b2a61a87f6203fcdcc876f784 865 Gene3D G3DSA:3.30.420.110 127 261 2.0E-36 T 13-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 BEN78_12535 93248e3b2a61a87f6203fcdcc876f784 865 Pfam PF00488 MutS domain V 614 806 8.7E-82 T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 BEN78_12535 93248e3b2a61a87f6203fcdcc876f784 865 SUPERFAMILY SSF53150 113 266 4.19E-40 T 13-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 BEN78_12535 93248e3b2a61a87f6203fcdcc876f784 865 SUPERFAMILY SSF55271 4 114 7.72E-42 T 13-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 BEN78_12535 93248e3b2a61a87f6203fcdcc876f784 865 SUPERFAMILY SSF48334 267 564 2.88E-84 T 13-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily BEN78_12535 93248e3b2a61a87f6203fcdcc876f784 865 Pfam PF05190 MutS family domain IV 427 518 3.2E-28 T 13-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 BEN78_12535 93248e3b2a61a87f6203fcdcc876f784 865 Pfam PF05192 MutS domain III 269 558 9.2E-39 T 13-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 BEN78_06295 43a6c46bfcba056c253ba26a71b89d33 300 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 36 258 4.5E-51 T 13-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 BEN78_06295 43a6c46bfcba056c253ba26a71b89d33 300 Gene3D G3DSA:1.10.800.10 5 300 1.2E-109 T 13-10-2018 IPR036951 Aromatic amino acid hydroxylase superfamily GO:0004497|GO:0005506|GO:0009072|GO:0055114 BEN78_06295 43a6c46bfcba056c253ba26a71b89d33 300 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 135 146 - T 13-10-2018 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 BEN78_06295 43a6c46bfcba056c253ba26a71b89d33 300 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 199 217 3.7E-13 T 13-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 BEN78_06295 43a6c46bfcba056c253ba26a71b89d33 300 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 231 250 3.7E-13 T 13-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 BEN78_06295 43a6c46bfcba056c253ba26a71b89d33 300 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 92 114 3.7E-13 T 13-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 BEN78_06295 43a6c46bfcba056c253ba26a71b89d33 300 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 30 275 3.5E-107 T 13-10-2018 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|KEGG: 00790+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 BEN78_06295 43a6c46bfcba056c253ba26a71b89d33 300 SUPERFAMILY SSF56534 21 287 3.4E-103 T 13-10-2018 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily BEN78_12805 386178995d8a7bf1d9179d9a37d99613 486 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 13 478 17.552 T 13-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 BEN78_12805 386178995d8a7bf1d9179d9a37d99613 486 Pfam PF00361 Proton-conducting membrane transporter 131 426 4.8E-74 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12805 386178995d8a7bf1d9179d9a37d99613 486 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 17 475 1.1E-133 T 13-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 BEN78_12805 386178995d8a7bf1d9179d9a37d99613 486 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 223 244 8.4E-5 T 13-10-2018 BEN78_12805 386178995d8a7bf1d9179d9a37d99613 486 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 420 439 8.4E-5 T 13-10-2018 BEN78_12805 386178995d8a7bf1d9179d9a37d99613 486 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 315 327 8.4E-5 T 13-10-2018 BEN78_12805 386178995d8a7bf1d9179d9a37d99613 486 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 79 104 8.4E-5 T 13-10-2018 BEN78_11925 fc8da2dab9972dbcf94fcad637d08e29 428 Gene3D G3DSA:1.10.3860.10 2 417 2.9E-124 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BEN78_11925 fc8da2dab9972dbcf94fcad637d08e29 428 PRINTS PR00173 Glutamate-aspartate symporter signature 78 103 2.0E-16 T 13-10-2018 BEN78_11925 fc8da2dab9972dbcf94fcad637d08e29 428 PRINTS PR00173 Glutamate-aspartate symporter signature 293 319 2.0E-16 T 13-10-2018 BEN78_11925 fc8da2dab9972dbcf94fcad637d08e29 428 PRINTS PR00173 Glutamate-aspartate symporter signature 328 347 2.0E-16 T 13-10-2018 BEN78_11925 fc8da2dab9972dbcf94fcad637d08e29 428 PRINTS PR00173 Glutamate-aspartate symporter signature 355 375 2.0E-16 T 13-10-2018 BEN78_11925 fc8da2dab9972dbcf94fcad637d08e29 428 PRINTS PR00173 Glutamate-aspartate symporter signature 191 210 2.0E-16 T 13-10-2018 BEN78_11925 fc8da2dab9972dbcf94fcad637d08e29 428 PRINTS PR00173 Glutamate-aspartate symporter signature 10 30 2.0E-16 T 13-10-2018 BEN78_11925 fc8da2dab9972dbcf94fcad637d08e29 428 SUPERFAMILY SSF118215 12 400 2.75E-106 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BEN78_11925 fc8da2dab9972dbcf94fcad637d08e29 428 Pfam PF00375 Sodium:dicarboxylate symporter family 13 400 6.7E-119 T 13-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BEN78_12715 109ce40f2f02ed928d06c89b52c1d92e 312 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 173 271 6.1E-16 T 13-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 BEN78_12715 109ce40f2f02ed928d06c89b52c1d92e 312 Gene3D G3DSA:2.60.120.330 1 312 2.7E-107 T 13-10-2018 IPR027443 Isopenicillin N synthase-like BEN78_12715 109ce40f2f02ed928d06c89b52c1d92e 312 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 5 122 8.1E-31 T 13-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain BEN78_12715 109ce40f2f02ed928d06c89b52c1d92e 312 PRINTS PR00682 Isopenicillin N synthase signature 24 41 1.4E-8 T 13-10-2018 BEN78_12715 109ce40f2f02ed928d06c89b52c1d92e 312 PRINTS PR00682 Isopenicillin N synthase signature 227 253 1.4E-8 T 13-10-2018 BEN78_12715 109ce40f2f02ed928d06c89b52c1d92e 312 PRINTS PR00682 Isopenicillin N synthase signature 191 212 1.4E-8 T 13-10-2018 BEN78_12715 109ce40f2f02ed928d06c89b52c1d92e 312 SUPERFAMILY SSF51197 3 308 2.33E-85 T 13-10-2018 BEN78_07265 f2e0a6f98c2b00aa7bd73c52e2480459 300 SUPERFAMILY SSF53335 79 258 4.53E-14 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_07265 f2e0a6f98c2b00aa7bd73c52e2480459 300 Gene3D G3DSA:3.40.50.150 61 257 9.3E-16 T 13-10-2018 BEN78_07265 f2e0a6f98c2b00aa7bd73c52e2480459 300 PIRSF PIRSF031679 20 300 4.6E-95 T 13-10-2018 IPR016980 S-adenosyl-L-methionine dependent methyltransferase, Alr7345, predicted BEN78_12180 2f677e89c8d4e18e38f68800922c03cb 165 PRINTS PR00601 Bacterioferritin signature 106 126 7.0E-36 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BEN78_12180 2f677e89c8d4e18e38f68800922c03cb 165 PRINTS PR00601 Bacterioferritin signature 44 64 7.0E-36 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BEN78_12180 2f677e89c8d4e18e38f68800922c03cb 165 PRINTS PR00601 Bacterioferritin signature 23 43 7.0E-36 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BEN78_12180 2f677e89c8d4e18e38f68800922c03cb 165 PRINTS PR00601 Bacterioferritin signature 85 105 7.0E-36 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BEN78_12180 2f677e89c8d4e18e38f68800922c03cb 165 PRINTS PR00601 Bacterioferritin signature 3 22 7.0E-36 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BEN78_12180 2f677e89c8d4e18e38f68800922c03cb 165 PRINTS PR00601 Bacterioferritin signature 128 149 7.0E-36 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BEN78_12180 2f677e89c8d4e18e38f68800922c03cb 165 SUPERFAMILY SSF47240 1 156 8.7E-42 T 13-10-2018 IPR009078 Ferritin-like superfamily BEN78_12180 2f677e89c8d4e18e38f68800922c03cb 165 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BEN78_12180 2f677e89c8d4e18e38f68800922c03cb 165 TIGRFAM TIGR00754 bfr: bacterioferritin 1 156 5.4E-42 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BEN78_12180 2f677e89c8d4e18e38f68800922c03cb 165 Pfam PF00210 Ferritin-like domain 11 144 2.0E-30 T 13-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 BEN78_12180 2f677e89c8d4e18e38f68800922c03cb 165 Gene3D G3DSA:1.20.1260.10 1 154 2.8E-56 T 13-10-2018 IPR012347 Ferritin-like BEN78_12180 2f677e89c8d4e18e38f68800922c03cb 165 PIRSF PIRSF002560 1 157 1.6E-58 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BEN78_03420 cef4119606e56815ff0290a9e42817ab 157 Pfam PF00583 Acetyltransferase (GNAT) family 54 143 1.5E-12 T 13-10-2018 IPR000182 GNAT domain BEN78_03420 cef4119606e56815ff0290a9e42817ab 157 Gene3D G3DSA:3.40.630.30 14 150 1.0E-25 T 13-10-2018 BEN78_03420 cef4119606e56815ff0290a9e42817ab 157 SUPERFAMILY SSF55729 16 144 6.75E-23 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN78_08300 4d27d32288158042ecde05a168d355ea 426 Gene3D G3DSA:3.40.50.2000 241 399 8.3E-39 T 13-10-2018 BEN78_08300 4d27d32288158042ecde05a168d355ea 426 TIGRFAM TIGR01426 MGT: glycosyltransferase, MGT family 20 414 2.5E-39 T 13-10-2018 IPR006326 UDP-glycosyltransferase, MGT GO:0016758|GO:0016999 BEN78_08300 4d27d32288158042ecde05a168d355ea 426 Gene3D G3DSA:3.40.50.2000 1 239 3.7E-29 T 13-10-2018 BEN78_08300 4d27d32288158042ecde05a168d355ea 426 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 206 387 1.4E-12 T 13-10-2018 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0016758 Reactome: R-HSA-156588 BEN78_08300 4d27d32288158042ecde05a168d355ea 426 SUPERFAMILY SSF53756 1 415 1.74E-69 T 13-10-2018 BEN78_08075 0b0bcadf96e90fa58585f933fae4b5b5 227 Pfam PF00849 RNA pseudouridylate synthase 26 178 3.1E-30 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN78_08075 0b0bcadf96e90fa58585f933fae4b5b5 227 Gene3D G3DSA:3.30.2350.10 14 226 1.2E-67 T 13-10-2018 BEN78_08075 0b0bcadf96e90fa58585f933fae4b5b5 227 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 64 78 - T 13-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN78_08075 0b0bcadf96e90fa58585f933fae4b5b5 227 SUPERFAMILY SSF55120 13 226 3.52E-60 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN78_10250 a312fea01fca3a840a74749b566887e7 326 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 5 318 1.8E-112 T 13-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 BEN78_10250 a312fea01fca3a840a74749b566887e7 326 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 3 322 33.94 T 13-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 BEN78_10250 a312fea01fca3a840a74749b566887e7 326 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 33 313 1.9E-98 T 13-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 BEN78_10250 a312fea01fca3a840a74749b566887e7 326 SUPERFAMILY SSF53659 3 322 1.25E-99 T 13-10-2018 BEN78_10250 a312fea01fca3a840a74749b566887e7 326 Gene3D G3DSA:3.40.718.10 1 324 6.8E-109 T 13-10-2018 BEN78_06570 ec9f788e09d4368a7c47c82a740c49c7 128 SUPERFAMILY SSF54427 5 128 1.28E-34 T 13-10-2018 IPR032710 NTF2-like domain superfamily BEN78_06570 ec9f788e09d4368a7c47c82a740c49c7 128 Gene3D G3DSA:3.10.450.50 5 128 2.3E-39 T 13-10-2018 BEN78_06570 ec9f788e09d4368a7c47c82a740c49c7 128 Pfam PF07366 SnoaL-like polyketide cyclase 8 128 6.3E-36 T 13-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 BEN78_14340 05961109ef0994c55a316bd00d797131 183 Pfam PF02566 OsmC-like protein 70 168 2.0E-10 T 13-10-2018 IPR003718 OsmC/Ohr family BEN78_14340 05961109ef0994c55a316bd00d797131 183 Gene3D G3DSA:3.30.300.20 19 177 1.1E-19 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta BEN78_14340 05961109ef0994c55a316bd00d797131 183 SUPERFAMILY SSF82784 24 171 1.23E-18 T 13-10-2018 IPR036102 OsmC/Ohr superfamily BEN78_06795 dd624633e06174000eaa8dc5214a89d7 234 Pfam PF00106 short chain dehydrogenase 4 196 1.8E-30 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06795 dd624633e06174000eaa8dc5214a89d7 234 SUPERFAMILY SSF51735 4 234 5.0E-70 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_06795 dd624633e06174000eaa8dc5214a89d7 234 Gene3D G3DSA:3.40.50.720 2 234 1.7E-65 T 13-10-2018 BEN78_06795 dd624633e06174000eaa8dc5214a89d7 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 8.5E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06795 dd624633e06174000eaa8dc5214a89d7 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 8.5E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06795 dd624633e06174000eaa8dc5214a89d7 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 8.5E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06795 dd624633e06174000eaa8dc5214a89d7 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 8.2E-17 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06795 dd624633e06174000eaa8dc5214a89d7 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 8.2E-17 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06795 dd624633e06174000eaa8dc5214a89d7 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 8.2E-17 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06795 dd624633e06174000eaa8dc5214a89d7 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 8.2E-17 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_12500 b97d84fca4e91862ca902c561050d602 103 Gene3D G3DSA:3.10.450.40 36 103 8.4E-9 T 13-10-2018 BEN78_01675 ccfd4c16b7478b928fd387bc994ddd60 404 Pfam PF00999 Sodium/hydrogen exchanger family 15 384 6.5E-30 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 BEN78_01675 ccfd4c16b7478b928fd387bc994ddd60 404 Gene3D G3DSA:1.20.1530.20 5 395 1.0E-52 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily BEN78_15765 936575db152f09f2fa029956044a60b1 540 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 11 498 3.0E-42 T 13-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 BEN78_15765 936575db152f09f2fa029956044a60b1 540 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 77 101 - T 13-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 BEN78_15765 936575db152f09f2fa029956044a60b1 540 SUPERFAMILY SSF103473 36 259 1.16E-18 T 13-10-2018 IPR036259 MFS transporter superfamily BEN78_15765 936575db152f09f2fa029956044a60b1 540 Gene3D G3DSA:1.20.1250.20 3 540 2.9E-143 T 13-10-2018 BEN78_15765 936575db152f09f2fa029956044a60b1 540 Pfam PF00854 POT family 88 480 1.5E-74 T 13-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 BEN78_16290 63c9232cbdd3a8458be70dd0e69baf70 396 Pfam PF13784 Fic/DOC family N-terminal 44 123 1.4E-21 T 13-10-2018 IPR025758 Fic/DOC N-terminal BEN78_16290 63c9232cbdd3a8458be70dd0e69baf70 396 Gene3D G3DSA:1.10.3290.10 63 303 1.0E-46 T 13-10-2018 IPR036597 Fido-like domain superfamily BEN78_16290 63c9232cbdd3a8458be70dd0e69baf70 396 Pfam PF02661 Fic/DOC family 134 244 6.6E-20 T 13-10-2018 IPR003812 Fido domain BEN78_16290 63c9232cbdd3a8458be70dd0e69baf70 396 SUPERFAMILY SSF140931 112 308 1.22E-37 T 13-10-2018 IPR036597 Fido-like domain superfamily BEN78_09200 c8b1a26e18b641c3e2eba268d6dc2c59 96 Hamap MF_00580 10 kDa chaperonin [groS]. 3 96 26.056 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BEN78_09200 c8b1a26e18b641c3e2eba268d6dc2c59 96 Gene3D G3DSA:2.30.33.40 2 96 1.2E-37 T 13-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 BEN78_09200 c8b1a26e18b641c3e2eba268d6dc2c59 96 SMART SM00883 3 95 1.2E-50 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BEN78_09200 c8b1a26e18b641c3e2eba268d6dc2c59 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 4 28 - T 13-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 BEN78_09200 c8b1a26e18b641c3e2eba268d6dc2c59 96 Pfam PF00166 Chaperonin 10 Kd subunit 3 95 3.2E-32 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BEN78_09200 c8b1a26e18b641c3e2eba268d6dc2c59 96 PRINTS PR00297 10kDa chaperonin signature 82 95 5.1E-32 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BEN78_09200 c8b1a26e18b641c3e2eba268d6dc2c59 96 PRINTS PR00297 10kDa chaperonin signature 61 73 5.1E-32 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BEN78_09200 c8b1a26e18b641c3e2eba268d6dc2c59 96 PRINTS PR00297 10kDa chaperonin signature 26 47 5.1E-32 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BEN78_09200 c8b1a26e18b641c3e2eba268d6dc2c59 96 PRINTS PR00297 10kDa chaperonin signature 4 19 5.1E-32 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BEN78_09200 c8b1a26e18b641c3e2eba268d6dc2c59 96 SUPERFAMILY SSF50129 2 95 1.57E-32 T 13-10-2018 IPR011032 GroES-like superfamily BEN78_04385 83ed968c1e58e9680a59de13067a1d83 208 SUPERFAMILY SSF56214 91 202 3.53E-25 T 13-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 BEN78_04385 83ed968c1e58e9680a59de13067a1d83 208 SUPERFAMILY SSF56214 16 83 3.53E-7 T 13-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 BEN78_04385 83ed968c1e58e9680a59de13067a1d83 208 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 92 164 8.5E-16 T 13-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 BEN78_04385 83ed968c1e58e9680a59de13067a1d83 208 Gene3D G3DSA:3.90.470.20 92 198 6.2E-22 T 13-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 BEN78_13135 b363ab299b3cfa78b575ed50839673e5 148 SUPERFAMILY SSF53098 1 141 6.96E-59 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily BEN78_13135 b363ab299b3cfa78b575ed50839673e5 148 Pfam PF00075 RNase H 2 140 2.1E-50 T 13-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 BEN78_13135 b363ab299b3cfa78b575ed50839673e5 148 Hamap MF_00042 Ribonuclease H [rnhA]. 1 148 35.792 T 13-10-2018 IPR022892 Ribonuclease HI GO:0004523 BEN78_13135 b363ab299b3cfa78b575ed50839673e5 148 Gene3D G3DSA:3.30.420.10 1 147 2.2E-61 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BEN78_00530 e8110b90de2fc997e74dde56691ac74f 778 Pfam PF13953 PapC C-terminal domain 702 763 1.2E-9 T 13-10-2018 IPR025949 PapC-like, C-terminal domain BEN78_00530 e8110b90de2fc997e74dde56691ac74f 778 Gene3D G3DSA:2.60.40.3110 233 322 5.3E-11 T 13-10-2018 BEN78_00530 e8110b90de2fc997e74dde56691ac74f 778 Pfam PF00577 Outer membrane usher protein 213 687 3.4E-24 T 13-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 BEN78_00530 e8110b90de2fc997e74dde56691ac74f 778 Gene3D G3DSA:2.60.40.2610 606 698 2.6E-8 T 13-10-2018 BEN78_08630 a0f90300dee003b8ab4ac5e5d878b46a 457 SUPERFAMILY SSF51556 100 397 3.54E-26 T 13-10-2018 IPR032466 Metal-dependent hydrolase BEN78_08630 a0f90300dee003b8ab4ac5e5d878b46a 457 Pfam PF07969 Amidohydrolase family 373 431 1.8E-8 T 13-10-2018 IPR013108 Amidohydrolase 3 BEN78_08630 a0f90300dee003b8ab4ac5e5d878b46a 457 SUPERFAMILY SSF51338 43 433 4.83E-23 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BEN78_08630 a0f90300dee003b8ab4ac5e5d878b46a 457 Gene3D G3DSA:3.20.20.140 101 393 7.7E-107 T 13-10-2018 BEN78_08630 a0f90300dee003b8ab4ac5e5d878b46a 457 Gene3D G3DSA:2.30.40.10 50 427 7.7E-107 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BEN78_08355 b0896ea412ebbdd7b9c2bc6944eb9d9e 431 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 41 219 1.0E-61 T 13-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 BEN78_08355 b0896ea412ebbdd7b9c2bc6944eb9d9e 431 Gene3D G3DSA:3.40.50.11720 42 217 4.2E-46 T 13-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 BEN78_08355 b0896ea412ebbdd7b9c2bc6944eb9d9e 431 SUPERFAMILY SSF53756 65 414 7.33E-18 T 13-10-2018 BEN78_08355 b0896ea412ebbdd7b9c2bc6944eb9d9e 431 Gene3D G3DSA:3.40.50.2000 227 411 1.1E-63 T 13-10-2018 BEN78_08355 b0896ea412ebbdd7b9c2bc6944eb9d9e 431 Pfam PF00534 Glycosyl transferases group 1 308 407 6.7E-7 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 BEN78_07985 2039ae820b1beab1792dc9f3ecc0042b 986 Pfam PF00593 TonB dependent receptor 468 985 2.5E-38 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_07985 2039ae820b1beab1792dc9f3ecc0042b 986 Gene3D G3DSA:2.170.130.10 32 174 2.3E-20 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_07985 2039ae820b1beab1792dc9f3ecc0042b 986 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 161 1.1E-15 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_07985 2039ae820b1beab1792dc9f3ecc0042b 986 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 39 986 4.8E-198 T 13-10-2018 IPR010104 Bacterial TonB-dependent receptor BEN78_07985 2039ae820b1beab1792dc9f3ecc0042b 986 SUPERFAMILY SSF56935 42 986 7.03E-93 T 13-10-2018 BEN78_09215 bdeac256a6e4e92971e0b044dbc3b19d 369 SUPERFAMILY SSF51569 19 360 5.86E-132 T 13-10-2018 BEN78_09215 bdeac256a6e4e92971e0b044dbc3b19d 369 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 18 361 1.1E-152 T 13-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 BEN78_09215 bdeac256a6e4e92971e0b044dbc3b19d 369 PIRSF PIRSF001361 7 364 5.6E-154 T 13-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 BEN78_09215 bdeac256a6e4e92971e0b044dbc3b19d 369 Pfam PF00793 DAHP synthetase I family 56 349 2.1E-95 T 13-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 BEN78_09215 bdeac256a6e4e92971e0b044dbc3b19d 369 Gene3D G3DSA:3.20.20.70 14 362 4.7E-156 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_12635 f30b4fcf6bebcdaf853a6aa557a345a8 519 Gene3D G3DSA:1.10.530.10 183 336 1.0E-31 T 13-10-2018 BEN78_12635 f30b4fcf6bebcdaf853a6aa557a345a8 519 Pfam PF01464 Transglycosylase SLT domain 196 298 3.6E-18 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 BEN78_12635 f30b4fcf6bebcdaf853a6aa557a345a8 519 SUPERFAMILY SSF53955 190 340 2.25E-33 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily BEN78_12635 f30b4fcf6bebcdaf853a6aa557a345a8 519 Gene3D G3DSA:3.10.350.10 459 518 8.3E-13 T 13-10-2018 IPR036779 LysM domain superfamily BEN78_12635 f30b4fcf6bebcdaf853a6aa557a345a8 519 Pfam PF01476 LysM domain 471 514 8.0E-13 T 13-10-2018 IPR018392 LysM domain BEN78_12635 f30b4fcf6bebcdaf853a6aa557a345a8 519 SMART SM00257 470 515 3.2E-10 T 13-10-2018 IPR018392 LysM domain BEN78_12635 f30b4fcf6bebcdaf853a6aa557a345a8 519 SUPERFAMILY SSF54106 469 514 7.59E-9 T 13-10-2018 BEN78_06215 5621e6985cec0d38cfa5b8383707063a 306 SMART SM00559 53 181 1.1E-21 T 13-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 BEN78_06215 5621e6985cec0d38cfa5b8383707063a 306 TIGRFAM TIGR02772 Ku_bact: Ku protein 2 266 5.9E-94 T 13-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type BEN78_06215 5621e6985cec0d38cfa5b8383707063a 306 Pfam PF02735 Ku70/Ku80 beta-barrel domain 12 178 1.2E-29 T 13-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 BEN78_06215 5621e6985cec0d38cfa5b8383707063a 306 SUPERFAMILY SSF100939 2 267 1.08E-43 T 13-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily BEN78_06215 5621e6985cec0d38cfa5b8383707063a 306 Gene3D G3DSA:2.40.290.10 4 174 4.9E-16 T 13-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily BEN78_06215 5621e6985cec0d38cfa5b8383707063a 306 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 2 263 30.266 T 13-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type BEN78_06215 5621e6985cec0d38cfa5b8383707063a 306 PIRSF PIRSF006493 1 302 6.5E-85 T 13-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type BEN78_03035 b113640e8afcfe1e1c43f2b049258b00 378 Gene3D G3DSA:1.10.10.10 304 375 6.6E-9 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_03035 b113640e8afcfe1e1c43f2b049258b00 378 SUPERFAMILY SSF102405 84 289 5.8E-40 T 13-10-2018 BEN78_03035 b113640e8afcfe1e1c43f2b049258b00 378 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 81 286 3.3E-69 T 13-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 BEN78_03035 b113640e8afcfe1e1c43f2b049258b00 378 Gene3D G3DSA:3.40.50.450 3 292 1.2E-90 T 13-10-2018 BEN78_03035 b113640e8afcfe1e1c43f2b049258b00 378 Pfam PF02481 DNA recombination-mediator protein A 82 280 1.5E-72 T 13-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 BEN78_00145 e8608ac8bb2d45ad8e7bd72521a45f06 210 Pfam PF13412 Winged helix-turn-helix DNA-binding 155 193 4.0E-6 T 13-10-2018 BEN78_00145 e8608ac8bb2d45ad8e7bd72521a45f06 210 Pfam PF02661 Fic/DOC family 3 85 7.2E-19 T 13-10-2018 IPR003812 Fido domain BEN78_00145 e8608ac8bb2d45ad8e7bd72521a45f06 210 SUPERFAMILY SSF46785 152 206 2.09E-8 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_00145 e8608ac8bb2d45ad8e7bd72521a45f06 210 Gene3D G3DSA:1.10.3290.10 1 144 3.4E-34 T 13-10-2018 IPR036597 Fido-like domain superfamily BEN78_00145 e8608ac8bb2d45ad8e7bd72521a45f06 210 SUPERFAMILY SSF140931 2 139 4.19E-33 T 13-10-2018 IPR036597 Fido-like domain superfamily BEN78_00145 e8608ac8bb2d45ad8e7bd72521a45f06 210 Gene3D G3DSA:1.10.10.10 150 199 3.2E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_15310 5e83dad3c7ae1ab91799a9923c6d66b3 264 Gene3D G3DSA:1.25.40.10 43 260 1.2E-33 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_15310 5e83dad3c7ae1ab91799a9923c6d66b3 264 SMART SM00028 152 185 6.3 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN78_15310 5e83dad3c7ae1ab91799a9923c6d66b3 264 SMART SM00028 82 115 19.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN78_15310 5e83dad3c7ae1ab91799a9923c6d66b3 264 SUPERFAMILY SSF48452 52 230 2.47E-15 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_15310 5e83dad3c7ae1ab91799a9923c6d66b3 264 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 10 251 4.3E-49 T 13-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW BEN78_00970 63a5117e30ef30c219d4a56fd6031352 454 Pfam PF02163 Peptidase family M50 11 440 2.6E-73 T 13-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 BEN78_00970 63a5117e30ef30c219d4a56fd6031352 454 SUPERFAMILY SSF50156 223 293 5.92E-11 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 BEN78_00970 63a5117e30ef30c219d4a56fd6031352 454 SUPERFAMILY SSF50156 88 185 3.55E-8 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 BEN78_00970 63a5117e30ef30c219d4a56fd6031352 454 Gene3D G3DSA:2.30.42.10 127 217 1.6E-8 T 13-10-2018 BEN78_00970 63a5117e30ef30c219d4a56fd6031352 454 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 4 453 1.2E-90 T 13-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 BEN78_00970 63a5117e30ef30c219d4a56fd6031352 454 Gene3D G3DSA:2.30.42.10 218 308 1.2E-11 T 13-10-2018 BEN78_10145 c47052d2e62a8f3defba921c99bef33b 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 229 9.2E-18 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN78_10145 c47052d2e62a8f3defba921c99bef33b 237 Gene3D G3DSA:1.10.10.10 128 235 6.3E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_10145 c47052d2e62a8f3defba921c99bef33b 237 SMART SM00862 155 229 4.3E-14 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN78_10145 c47052d2e62a8f3defba921c99bef33b 237 Gene3D G3DSA:3.40.50.2300 5 127 1.6E-38 T 13-10-2018 BEN78_10145 c47052d2e62a8f3defba921c99bef33b 237 SMART SM00448 9 121 2.3E-41 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_10145 c47052d2e62a8f3defba921c99bef33b 237 SUPERFAMILY SSF46894 130 229 1.9E-22 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BEN78_10145 c47052d2e62a8f3defba921c99bef33b 237 Pfam PF00072 Response regulator receiver domain 11 121 7.1E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_10145 c47052d2e62a8f3defba921c99bef33b 237 SUPERFAMILY SSF52172 8 134 5.98E-40 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_02575 a48e4cd0c037fc40215db150360fcfa1 287 SUPERFAMILY SSF56281 9 253 4.62E-48 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN78_02575 a48e4cd0c037fc40215db150360fcfa1 287 SMART SM00849 14 205 1.5E-21 T 13-10-2018 IPR001279 Metallo-beta-lactamase BEN78_02575 a48e4cd0c037fc40215db150360fcfa1 287 Pfam PF00753 Metallo-beta-lactamase superfamily 14 205 1.2E-20 T 13-10-2018 IPR001279 Metallo-beta-lactamase BEN78_02575 a48e4cd0c037fc40215db150360fcfa1 287 Gene3D G3DSA:3.60.15.10 2 287 5.8E-101 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN78_01645 08f5a4548f831555a722aad716d5ed20 186 SUPERFAMILY SSF53335 8 172 3.12E-40 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_01645 08f5a4548f831555a722aad716d5ed20 186 PIRSF PIRSF004553 7 185 7.6E-39 T 13-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 BEN78_01645 08f5a4548f831555a722aad716d5ed20 186 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 4 174 1.1E-40 T 13-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 BEN78_01645 08f5a4548f831555a722aad716d5ed20 186 Gene3D G3DSA:3.40.50.150 1 185 8.9E-48 T 13-10-2018 BEN78_01645 08f5a4548f831555a722aad716d5ed20 186 Pfam PF03602 Conserved hypothetical protein 95 8 182 2.6E-46 T 13-10-2018 BEN78_05760 44204a5376a72e6ba8c183e5e7dc31b6 232 SUPERFAMILY SSF144091 13 220 4.97E-34 T 13-10-2018 BEN78_05760 44204a5376a72e6ba8c183e5e7dc31b6 232 Pfam PF01694 Rhomboid family 67 217 2.7E-34 T 13-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 BEN78_05760 44204a5376a72e6ba8c183e5e7dc31b6 232 Gene3D G3DSA:1.20.1540.10 10 227 1.8E-28 T 13-10-2018 IPR035952 Rhomboid-like superfamily BEN78_14975 0c1935b79b5bbe4564ccfd47094702cb 416 SUPERFAMILY SSF52518 58 413 1.29E-95 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold BEN78_14975 0c1935b79b5bbe4564ccfd47094702cb 416 Pfam PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal 12 50 1.6E-18 T 13-10-2018 IPR022593 2-oxoisovalerate dehydrogenase, E1 alpha subunit, N-terminal domain KEGG: 00280+1.2.4.4|KEGG: 00640+1.2.4.4|MetaCyc: PWY-5046 BEN78_14975 0c1935b79b5bbe4564ccfd47094702cb 416 Pfam PF00676 Dehydrogenase E1 component 88 381 3.2E-100 T 13-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 BEN78_14975 0c1935b79b5bbe4564ccfd47094702cb 416 Gene3D G3DSA:3.40.50.970 9 414 9.2E-126 T 13-10-2018 BEN78_12515 e6806402719a411678116b0bf4a28fd3 137 SUPERFAMILY SSF55174 12 105 5.23E-24 T 13-10-2018 BEN78_12515 e6806402719a411678116b0bf4a28fd3 137 Gene3D G3DSA:3.10.290.10 7 112 1.4E-33 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BEN78_12515 e6806402719a411678116b0bf4a28fd3 137 PIRSF PIRSF016821 10 136 4.6E-36 T 13-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 BEN78_12515 e6806402719a411678116b0bf4a28fd3 137 SMART SM00363 13 75 1.9E-5 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_12515 e6806402719a411678116b0bf4a28fd3 137 Pfam PF01479 S4 domain 13 58 3.7E-10 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_14040 5d22057d1a75943f89081282189d0de7 188 Gene3D G3DSA:1.10.10.10 129 188 7.3E-16 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_14040 5d22057d1a75943f89081282189d0de7 188 SUPERFAMILY SSF88946 8 115 2.54E-27 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BEN78_14040 5d22057d1a75943f89081282189d0de7 188 Gene3D G3DSA:1.10.1740.10 5 126 2.2E-25 T 13-10-2018 BEN78_14040 5d22057d1a75943f89081282189d0de7 188 SUPERFAMILY SSF88659 111 186 2.24E-18 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN78_14040 5d22057d1a75943f89081282189d0de7 188 Pfam PF04542 Sigma-70 region 2 31 97 4.2E-14 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BEN78_14040 5d22057d1a75943f89081282189d0de7 188 Pfam PF04545 Sigma-70, region 4 135 184 9.4E-18 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 BEN78_14040 5d22057d1a75943f89081282189d0de7 188 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 27 184 2.1E-33 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BEN78_07925 b89414b6d9934e57a2c5127a8370e08e 399 SUPERFAMILY SSF53901 1 238 4.14E-33 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 BEN78_07925 b89414b6d9934e57a2c5127a8370e08e 399 SMART SM00825 Beta-ketoacyl synthase 36 399 6.9E-9 T 13-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BEN78_07925 b89414b6d9934e57a2c5127a8370e08e 399 Gene3D G3DSA:3.40.47.10 6 247 2.6E-33 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 BEN78_07925 b89414b6d9934e57a2c5127a8370e08e 399 SUPERFAMILY SSF53901 211 396 2.8E-48 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 BEN78_07925 b89414b6d9934e57a2c5127a8370e08e 399 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 247 353 4.3E-28 T 13-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal BEN78_07925 b89414b6d9934e57a2c5127a8370e08e 399 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 72 237 1.7E-23 T 13-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal BEN78_07925 b89414b6d9934e57a2c5127a8370e08e 399 Gene3D G3DSA:3.40.47.10 250 393 2.5E-42 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 BEN78_07925 b89414b6d9934e57a2c5127a8370e08e 399 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 156 172 - T 13-10-2018 IPR018201 Beta-ketoacyl synthase, active site BEN78_00595 df2c3f277ab4e7ab89b585ac5b3153a1 41 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 40 7.4E-9 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_00595 df2c3f277ab4e7ab89b585ac5b3153a1 41 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_00595 df2c3f277ab4e7ab89b585ac5b3153a1 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 17.227 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_00595 df2c3f277ab4e7ab89b585ac5b3153a1 41 SUPERFAMILY SSF57840 1 40 8.24E-14 T 13-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_00595 df2c3f277ab4e7ab89b585ac5b3153a1 41 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 17 40 0.006 T 13-10-2018 BEN78_00595 df2c3f277ab4e7ab89b585ac5b3153a1 41 Pfam PF00444 Ribosomal protein L36 1 40 2.1E-17 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_06845 81b98055eb65e8981777bb99e06dfaff 526 SMART SM00028 233 266 0.016 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN78_06845 81b98055eb65e8981777bb99e06dfaff 526 SMART SM00028 368 401 96.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN78_06845 81b98055eb65e8981777bb99e06dfaff 526 SUPERFAMILY SSF48452 214 400 1.9E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_06845 81b98055eb65e8981777bb99e06dfaff 526 Gene3D G3DSA:1.25.40.10 151 295 1.0E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_06845 81b98055eb65e8981777bb99e06dfaff 526 Pfam PF00486 Transcriptional regulatory protein, C terminal 34 106 9.3E-13 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN78_06845 81b98055eb65e8981777bb99e06dfaff 526 Gene3D G3DSA:1.25.40.10 302 409 1.4E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_06845 81b98055eb65e8981777bb99e06dfaff 526 SUPERFAMILY SSF46894 12 106 1.11E-16 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BEN78_06845 81b98055eb65e8981777bb99e06dfaff 526 SMART SM00862 31 106 2.8E-10 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN78_06845 81b98055eb65e8981777bb99e06dfaff 526 Gene3D G3DSA:1.10.10.10 5 109 1.9E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_09590 71e7ddf4b04b87e0511f09133a1221eb 302 Gene3D G3DSA:3.30.1700.10 128 302 6.0E-66 T 13-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 BEN78_09590 71e7ddf4b04b87e0511f09133a1221eb 302 Gene3D G3DSA:3.30.230.20 1 127 1.9E-46 T 13-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 BEN78_09590 71e7ddf4b04b87e0511f09133a1221eb 302 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 3 299 2.8E-116 T 13-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 BEN78_09590 71e7ddf4b04b87e0511f09133a1221eb 302 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 275 1.2E-103 T 13-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 BEN78_09590 71e7ddf4b04b87e0511f09133a1221eb 302 SUPERFAMILY SSF54211 3 125 2.5E-41 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BEN78_09590 71e7ddf4b04b87e0511f09133a1221eb 302 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 279 45.958 T 13-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 BEN78_09590 71e7ddf4b04b87e0511f09133a1221eb 302 SUPERFAMILY SSF54211 134 276 5.61E-52 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BEN78_15930 32c681b93c7906a8230be9b2517ea1e7 413 Gene3D G3DSA:1.10.287.130 175 264 1.5E-5 T 13-10-2018 BEN78_15930 32c681b93c7906a8230be9b2517ea1e7 413 Gene3D G3DSA:3.30.565.10 279 409 6.3E-15 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_15930 32c681b93c7906a8230be9b2517ea1e7 413 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 380 1.1E-5 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_15930 32c681b93c7906a8230be9b2517ea1e7 413 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 399 1.1E-5 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_15930 32c681b93c7906a8230be9b2517ea1e7 413 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 348 1.1E-5 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_15930 32c681b93c7906a8230be9b2517ea1e7 413 SMART SM00387 295 402 1.1E-7 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_15930 32c681b93c7906a8230be9b2517ea1e7 413 SUPERFAMILY SSF55874 282 400 1.44E-17 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_15930 32c681b93c7906a8230be9b2517ea1e7 413 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 299 400 6.9E-6 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_07125 23d92b73644d2c512e1c8f88a8d5eb0b 369 SUPERFAMILY SSF50129 1 184 3.8E-71 T 13-10-2018 IPR011032 GroES-like superfamily BEN78_07125 23d92b73644d2c512e1c8f88a8d5eb0b 369 Gene3D G3DSA:3.90.180.10 6 364 7.9E-149 T 13-10-2018 BEN78_07125 23d92b73644d2c512e1c8f88a8d5eb0b 369 Gene3D G3DSA:3.40.50.720 174 312 7.9E-149 T 13-10-2018 BEN78_07125 23d92b73644d2c512e1c8f88a8d5eb0b 369 SMART SM00829 12 367 2.0E-4 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BEN78_07125 23d92b73644d2c512e1c8f88a8d5eb0b 369 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 154 7.2E-26 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BEN78_07125 23d92b73644d2c512e1c8f88a8d5eb0b 369 Pfam PF00107 Zinc-binding dehydrogenase 197 329 1.1E-24 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BEN78_07125 23d92b73644d2c512e1c8f88a8d5eb0b 369 SUPERFAMILY SSF51735 161 333 9.7E-46 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_07125 23d92b73644d2c512e1c8f88a8d5eb0b 369 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 13-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 BEN78_07125 23d92b73644d2c512e1c8f88a8d5eb0b 369 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 369 1.9E-220 T 13-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 BEN78_07125 23d92b73644d2c512e1c8f88a8d5eb0b 369 SUPERFAMILY SSF50129 318 369 1.22E-10 T 13-10-2018 IPR011032 GroES-like superfamily BEN78_04375 a760ea6bb6fc266612aa721ab0da6a64 86 Pfam PF04226 Transglycosylase associated protein 38 86 7.7E-15 T 13-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 BEN78_04660 5e8f3bfa518ee8e1d7e680aa28928644 186 Gene3D G3DSA:1.10.357.10 1 184 7.3E-34 T 13-10-2018 BEN78_04660 5e8f3bfa518ee8e1d7e680aa28928644 186 SUPERFAMILY SSF46689 3 75 4.44E-6 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN78_09955 28a44049c1679b3b0a8bf2f89046784e 631 Gene3D G3DSA:3.55.50.30 175 292 5.7E-40 T 13-10-2018 BEN78_09955 28a44049c1679b3b0a8bf2f89046784e 631 PRINTS PR00811 Bacterial general secretion pathway protein D signature 377 387 4.1E-17 T 13-10-2018 IPR001775 GspD/PilQ family BEN78_09955 28a44049c1679b3b0a8bf2f89046784e 631 PRINTS PR00811 Bacterial general secretion pathway protein D signature 611 625 4.1E-17 T 13-10-2018 IPR001775 GspD/PilQ family BEN78_09955 28a44049c1679b3b0a8bf2f89046784e 631 PRINTS PR00811 Bacterial general secretion pathway protein D signature 457 481 4.1E-17 T 13-10-2018 IPR001775 GspD/PilQ family BEN78_09955 28a44049c1679b3b0a8bf2f89046784e 631 PRINTS PR00811 Bacterial general secretion pathway protein D signature 588 606 4.1E-17 T 13-10-2018 IPR001775 GspD/PilQ family BEN78_09955 28a44049c1679b3b0a8bf2f89046784e 631 Pfam PF07660 Secretin and TonB N terminus short domain 222 268 1.6E-8 T 13-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 BEN78_09955 28a44049c1679b3b0a8bf2f89046784e 631 Gene3D G3DSA:2.60.40.3470 41 166 8.3E-31 T 13-10-2018 BEN78_09955 28a44049c1679b3b0a8bf2f89046784e 631 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 569 602 - T 13-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 BEN78_09955 28a44049c1679b3b0a8bf2f89046784e 631 Pfam PF00263 Bacterial type II and III secretion system protein 461 624 6.3E-48 T 13-10-2018 IPR004846 Type II/III secretion system GO:0009306 BEN78_09955 28a44049c1679b3b0a8bf2f89046784e 631 Pfam PF03958 Bacterial type II/III secretion system short domain 295 377 8.1E-14 T 13-10-2018 IPR005644 NolW-like BEN78_09955 28a44049c1679b3b0a8bf2f89046784e 631 Gene3D G3DSA:3.30.1370.120 293 376 1.1E-10 T 13-10-2018 IPR038591 NolW-like superfamily BEN78_09955 28a44049c1679b3b0a8bf2f89046784e 631 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 196 623 1.8E-147 T 13-10-2018 IPR013355 Type IV pilus secretin PilQ BEN78_09955 28a44049c1679b3b0a8bf2f89046784e 631 SMART SM00965 221 269 2.3E-10 T 13-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 BEN78_04605 f92893034bc3caeee0f27fed0d75ec20 420 SUPERFAMILY SSF53383 7 402 3.95E-94 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_04605 f92893034bc3caeee0f27fed0d75ec20 420 Gene3D G3DSA:3.90.1150.10 24 398 8.3E-121 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN78_04605 f92893034bc3caeee0f27fed0d75ec20 420 Pfam PF00155 Aminotransferase class I and II 37 396 3.5E-50 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BEN78_04605 f92893034bc3caeee0f27fed0d75ec20 420 Gene3D G3DSA:3.40.640.10 54 295 8.3E-121 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN78_08930 832c52bcd6588e9ade03ce7b24df8f27 92 Pfam PF04359 Protein of unknown function (DUF493) 11 92 2.1E-19 T 13-10-2018 IPR007454 Uncharacterised protein family UPF0250 BEN78_08930 832c52bcd6588e9ade03ce7b24df8f27 92 SUPERFAMILY SSF117991 6 92 3.66E-17 T 13-10-2018 IPR027471 YbeD-like domain superfamily BEN78_08930 832c52bcd6588e9ade03ce7b24df8f27 92 Gene3D G3DSA:3.30.70.260 4 92 2.7E-13 T 13-10-2018 BEN78_12710 ddc1444764224f383b3fcf89e129a40c 449 SUPERFAMILY SSF53738 261 368 7.46E-29 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN78_12710 ddc1444764224f383b3fcf89e129a40c 449 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 377 444 1.2E-12 T 13-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN78_12710 ddc1444764224f383b3fcf89e129a40c 449 SUPERFAMILY SSF53738 2 184 1.02E-48 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN78_12710 ddc1444764224f383b3fcf89e129a40c 449 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 261 369 7.1E-29 T 13-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN78_12710 ddc1444764224f383b3fcf89e129a40c 449 Gene3D G3DSA:3.40.120.10 177 364 1.1E-60 T 13-10-2018 BEN78_12710 ddc1444764224f383b3fcf89e129a40c 449 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 137 1.0E-43 T 13-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN78_12710 ddc1444764224f383b3fcf89e129a40c 449 Gene3D G3DSA:3.30.310.50 373 449 9.5E-20 T 13-10-2018 BEN78_12710 ddc1444764224f383b3fcf89e129a40c 449 SUPERFAMILY SSF55957 361 447 6.41E-19 T 13-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN78_12710 ddc1444764224f383b3fcf89e129a40c 449 SUPERFAMILY SSF53738 158 259 1.06E-25 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN78_12710 ddc1444764224f383b3fcf89e129a40c 449 Gene3D G3DSA:3.40.120.10 260 342 1.1E-60 T 13-10-2018 BEN78_12710 ddc1444764224f383b3fcf89e129a40c 449 Gene3D G3DSA:3.40.120.10 2 156 1.7E-47 T 13-10-2018 BEN78_12710 ddc1444764224f383b3fcf89e129a40c 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 98 112 7.5E-13 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN78_12710 ddc1444764224f383b3fcf89e129a40c 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 177 196 7.5E-13 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN78_12710 ddc1444764224f383b3fcf89e129a40c 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 237 252 7.5E-13 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN78_12710 ddc1444764224f383b3fcf89e129a40c 449 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 160 257 1.6E-14 T 13-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN78_12710 ddc1444764224f383b3fcf89e129a40c 449 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 447 44.195 T 13-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN78_12710 ddc1444764224f383b3fcf89e129a40c 449 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 99 108 - T 13-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN78_12710 ddc1444764224f383b3fcf89e129a40c 449 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 445 1.4E-182 T 13-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN78_01480 93e3c51c060ea12071a047f8b9b94ea2 343 Gene3D G3DSA:2.120.10.30 33 340 3.6E-101 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BEN78_01480 93e3c51c060ea12071a047f8b9b94ea2 343 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 60 325 7.0E-53 T 13-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region BEN78_01480 93e3c51c060ea12071a047f8b9b94ea2 343 SUPERFAMILY SSF63829 34 334 3.27E-56 T 13-10-2018 BEN78_01480 93e3c51c060ea12071a047f8b9b94ea2 343 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 61 78 5.5E-5 T 13-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) BEN78_01480 93e3c51c060ea12071a047f8b9b94ea2 343 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 270 287 5.5E-5 T 13-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) BEN78_01480 93e3c51c060ea12071a047f8b9b94ea2 343 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 201 223 5.5E-5 T 13-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) BEN78_12545 bfc845a900a21a30b1a03d49435bb0a6 870 Pfam PF00593 TonB dependent receptor 352 869 9.1E-11 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_12545 bfc845a900a21a30b1a03d49435bb0a6 870 SUPERFAMILY SSF56935 71 870 8.24E-53 T 13-10-2018 BEN78_12545 bfc845a900a21a30b1a03d49435bb0a6 870 Pfam PF07715 TonB-dependent Receptor Plug Domain 72 191 5.2E-5 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_12545 bfc845a900a21a30b1a03d49435bb0a6 870 Gene3D G3DSA:2.40.170.20 263 870 1.0E-24 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_15360 321b8f19fe7e9a52251c31e13bbc375c 191 SUPERFAMILY SSF52833 7 166 2.23E-16 T 13-10-2018 IPR036249 Thioredoxin-like superfamily BEN78_15360 321b8f19fe7e9a52251c31e13bbc375c 191 Gene3D G3DSA:3.40.30.10 43 173 1.8E-15 T 13-10-2018 BEN78_15360 321b8f19fe7e9a52251c31e13bbc375c 191 ProSitePatterns PS00194 Thioredoxin family active site. 71 89 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 BEN78_10370 da1f9f723bb65fc3517327895e59e651 313 PIRSF PIRSF006431 1 313 5.6E-136 T 13-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 BEN78_10370 da1f9f723bb65fc3517327895e59e651 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 63 74 1.2E-13 T 13-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 BEN78_10370 da1f9f723bb65fc3517327895e59e651 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 37 45 1.2E-13 T 13-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 BEN78_10370 da1f9f723bb65fc3517327895e59e651 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 106 120 1.2E-13 T 13-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 BEN78_10370 da1f9f723bb65fc3517327895e59e651 313 SUPERFAMILY SSF53474 2 312 1.63E-63 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_10370 da1f9f723bb65fc3517327895e59e651 313 Gene3D G3DSA:3.40.50.1820 1 313 9.4E-113 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_10370 da1f9f723bb65fc3517327895e59e651 313 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 9 312 7.9E-148 T 13-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 BEN78_10370 da1f9f723bb65fc3517327895e59e651 313 Pfam PF00561 alpha/beta hydrolase fold 35 298 5.3E-33 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN78_03680 90b59cad12bdbcb2a0c23a286ba3ba49 228 Gene3D G3DSA:1.10.10.10 123 225 5.0E-30 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_03680 90b59cad12bdbcb2a0c23a286ba3ba49 228 Pfam PF00072 Response regulator receiver domain 3 113 2.3E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_03680 90b59cad12bdbcb2a0c23a286ba3ba49 228 Gene3D G3DSA:3.40.50.2300 1 121 5.3E-41 T 13-10-2018 BEN78_03680 90b59cad12bdbcb2a0c23a286ba3ba49 228 SUPERFAMILY SSF52172 1 170 9.05E-40 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_03680 90b59cad12bdbcb2a0c23a286ba3ba49 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 220 2.8E-24 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN78_03680 90b59cad12bdbcb2a0c23a286ba3ba49 228 SMART SM00862 145 220 1.7E-26 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN78_03680 90b59cad12bdbcb2a0c23a286ba3ba49 228 SMART SM00448 1 112 2.1E-40 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_13800 4c2270c1afef38f4e0e4d019bd90566c 119 Pfam PF07238 PilZ domain 15 100 4.6E-9 T 13-10-2018 IPR009875 PilZ domain GO:0035438 BEN78_13800 4c2270c1afef38f4e0e4d019bd90566c 119 Gene3D G3DSA:2.40.10.220 3 119 2.0E-45 T 13-10-2018 BEN78_12445 89c4ee015b8ed6795640af87c01e5d50 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 124 144 1.3E-8 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN78_12445 89c4ee015b8ed6795640af87c01e5d50 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 90 1.3E-8 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN78_12445 89c4ee015b8ed6795640af87c01e5d50 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 94 110 1.3E-8 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN78_12445 89c4ee015b8ed6795640af87c01e5d50 153 SMART SM00347 35 134 3.8E-16 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN78_12445 89c4ee015b8ed6795640af87c01e5d50 153 Gene3D G3DSA:1.10.10.10 9 149 5.0E-33 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_12445 89c4ee015b8ed6795640af87c01e5d50 153 SUPERFAMILY SSF46785 12 148 2.61E-30 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_12445 89c4ee015b8ed6795640af87c01e5d50 153 ProSitePatterns PS01117 MarR-type HTH domain signature. 73 107 - T 13-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site BEN78_12445 89c4ee015b8ed6795640af87c01e5d50 153 Pfam PF01047 MarR family 56 99 1.1E-12 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN78_05375 e37c1e272488ce5e12a20b3c9aa2b980 419 SUPERFAMILY SSF103473 18 418 6.41E-79 T 13-10-2018 IPR036259 MFS transporter superfamily BEN78_05375 e37c1e272488ce5e12a20b3c9aa2b980 419 Pfam PF07690 Major Facilitator Superfamily 35 257 1.9E-37 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN78_05375 e37c1e272488ce5e12a20b3c9aa2b980 419 Pfam PF07690 Major Facilitator Superfamily 275 414 3.5E-13 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN78_05375 e37c1e272488ce5e12a20b3c9aa2b980 419 Gene3D G3DSA:1.20.1250.20 23 419 2.7E-78 T 13-10-2018 BEN78_05375 e37c1e272488ce5e12a20b3c9aa2b980 419 ProSitePatterns PS00217 Sugar transport proteins signature 2. 123 148 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BEN78_09020 79ff11de698fe0f5dab3f6fcc7036ac5 453 Gene3D G3DSA:3.40.220.10 7 129 8.5E-23 T 13-10-2018 BEN78_09020 79ff11de698fe0f5dab3f6fcc7036ac5 453 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 144 441 2.7E-100 T 13-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 BEN78_09020 79ff11de698fe0f5dab3f6fcc7036ac5 453 SUPERFAMILY SSF53187 139 449 1.6E-102 T 13-10-2018 BEN78_09020 79ff11de698fe0f5dab3f6fcc7036ac5 453 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 302 309 - T 13-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 BEN78_09020 79ff11de698fe0f5dab3f6fcc7036ac5 453 PRINTS PR00481 Cytosol aminopeptidase signature 276 297 9.8E-42 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BEN78_09020 79ff11de698fe0f5dab3f6fcc7036ac5 453 PRINTS PR00481 Cytosol aminopeptidase signature 217 234 9.8E-42 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BEN78_09020 79ff11de698fe0f5dab3f6fcc7036ac5 453 PRINTS PR00481 Cytosol aminopeptidase signature 298 318 9.8E-42 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BEN78_09020 79ff11de698fe0f5dab3f6fcc7036ac5 453 PRINTS PR00481 Cytosol aminopeptidase signature 326 341 9.8E-42 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BEN78_09020 79ff11de698fe0f5dab3f6fcc7036ac5 453 PRINTS PR00481 Cytosol aminopeptidase signature 239 260 9.8E-42 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BEN78_09020 79ff11de698fe0f5dab3f6fcc7036ac5 453 Gene3D G3DSA:3.40.630.10 131 452 1.3E-117 T 13-10-2018 BEN78_15095 1ea12051f82be6d835722421b0cae149 271 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 25 252 7.9E-59 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 BEN78_15095 1ea12051f82be6d835722421b0cae149 271 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 28 251 28.953 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 BEN78_15095 1ea12051f82be6d835722421b0cae149 271 Gene3D G3DSA:3.20.20.10 12 263 4.1E-87 T 13-10-2018 IPR029066 PLP-binding barrel BEN78_15095 1ea12051f82be6d835722421b0cae149 271 PIRSF PIRSF004848 18 258 6.5E-69 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 BEN78_15095 1ea12051f82be6d835722421b0cae149 271 SUPERFAMILY SSF51419 21 250 4.45E-74 T 13-10-2018 IPR029066 PLP-binding barrel BEN78_15095 1ea12051f82be6d835722421b0cae149 271 Pfam PF01168 Alanine racemase, N-terminal domain 30 253 2.6E-23 T 13-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN78_02000 7064f6783220054f3f0c21dd848b6d5c 315 Pfam PF13437 HlyD family secretion protein 198 281 6.7E-6 T 13-10-2018 BEN78_02000 7064f6783220054f3f0c21dd848b6d5c 315 SUPERFAMILY SSF111369 38 119 1.15E-5 T 13-10-2018 BEN78_02000 7064f6783220054f3f0c21dd848b6d5c 315 Pfam PF13533 Biotin-lipoyl like 42 82 1.4E-7 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain BEN78_02000 7064f6783220054f3f0c21dd848b6d5c 315 Gene3D G3DSA:1.10.287.470 102 163 1.9E-11 T 13-10-2018 BEN78_02000 7064f6783220054f3f0c21dd848b6d5c 315 Gene3D G3DSA:1.10.287.470 165 197 1.2E-9 T 13-10-2018 BEN78_02000 7064f6783220054f3f0c21dd848b6d5c 315 Gene3D G3DSA:1.10.287.470 68 101 5.2E-7 T 13-10-2018 BEN78_02000 7064f6783220054f3f0c21dd848b6d5c 315 SUPERFAMILY SSF111369 103 160 1.7E-5 T 13-10-2018 BEN78_02000 7064f6783220054f3f0c21dd848b6d5c 315 Gene3D G3DSA:2.40.30.170 233 275 1.2E-9 T 13-10-2018 BEN78_02000 7064f6783220054f3f0c21dd848b6d5c 315 Gene3D G3DSA:2.40.50.100 198 232 1.2E-9 T 13-10-2018 BEN78_02000 7064f6783220054f3f0c21dd848b6d5c 315 Gene3D G3DSA:2.40.50.100 35 67 5.2E-7 T 13-10-2018 BEN78_02000 7064f6783220054f3f0c21dd848b6d5c 315 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 300 315 7.9E-6 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BEN78_02000 7064f6783220054f3f0c21dd848b6d5c 315 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 46 66 7.9E-6 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BEN78_12020 088e08c2df009df0555c62f412a1294b 257 Pfam PF08543 Phosphomethylpyrimidine kinase 5 247 9.3E-86 T 13-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 BEN78_12020 088e08c2df009df0555c62f412a1294b 257 Gene3D G3DSA:3.40.1190.20 1 255 2.2E-90 T 13-10-2018 IPR029056 Ribokinase-like BEN78_12020 088e08c2df009df0555c62f412a1294b 257 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 1 243 1.5E-81 T 13-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BEN78_12020 088e08c2df009df0555c62f412a1294b 257 SUPERFAMILY SSF53613 1 244 5.46E-71 T 13-10-2018 IPR029056 Ribokinase-like BEN78_10340 bba3a0dcf14ebcd9e82204e94ac7f3b4 217 Gene3D G3DSA:3.30.1060.10 6 217 2.9E-86 T 13-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BEN78_10340 bba3a0dcf14ebcd9e82204e94ac7f3b4 217 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 46 202 7.2E-61 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BEN78_10340 bba3a0dcf14ebcd9e82204e94ac7f3b4 217 SUPERFAMILY SSF55068 8 212 6.93E-77 T 13-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BEN78_10340 bba3a0dcf14ebcd9e82204e94ac7f3b4 217 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 45 208 37.593 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BEN78_10340 bba3a0dcf14ebcd9e82204e94ac7f3b4 217 Pfam PF01625 Peptide methionine sulfoxide reductase 48 202 5.1E-63 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BEN78_01135 9ce47861659067d020fd0c85892c0891 163 Pfam PF02542 YgbB family 7 160 5.5E-63 T 13-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BEN78_01135 9ce47861659067d020fd0c85892c0891 163 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 7 162 35.603 T 13-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BEN78_01135 9ce47861659067d020fd0c85892c0891 163 SUPERFAMILY SSF69765 7 161 3.14E-64 T 13-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BEN78_01135 9ce47861659067d020fd0c85892c0891 163 Gene3D G3DSA:3.30.1330.50 5 163 1.1E-66 T 13-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BEN78_01135 9ce47861659067d020fd0c85892c0891 163 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 8 161 3.6E-68 T 13-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BEN78_01135 9ce47861659067d020fd0c85892c0891 163 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 41 56 - T 13-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BEN78_04695 700976037a00e4babbb5998919e81170 352 Gene3D G3DSA:3.40.50.10490 209 337 1.1E-38 T 13-10-2018 BEN78_04695 700976037a00e4babbb5998919e81170 352 Gene3D G3DSA:3.40.50.10490 11 205 2.6E-47 T 13-10-2018 BEN78_04695 700976037a00e4babbb5998919e81170 352 Pfam PF01380 SIS domain 214 296 4.8E-15 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BEN78_04695 700976037a00e4babbb5998919e81170 352 Pfam PF01380 SIS domain 55 175 9.0E-18 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BEN78_04695 700976037a00e4babbb5998919e81170 352 SUPERFAMILY SSF53697 16 350 3.85E-73 T 13-10-2018 BEN78_13030 bcfaf4f4b10b62b26ca586eb9b02fcdf 199 Pfam PF01066 CDP-alcohol phosphatidyltransferase 5 71 1.0E-16 T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 BEN78_13030 bcfaf4f4b10b62b26ca586eb9b02fcdf 199 Gene3D G3DSA:1.20.120.1760 2 158 2.1E-16 T 13-10-2018 BEN78_13030 bcfaf4f4b10b62b26ca586eb9b02fcdf 199 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 188 4.4E-52 T 13-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 BEN78_13030 bcfaf4f4b10b62b26ca586eb9b02fcdf 199 PIRSF PIRSF000847 1 199 1.4E-44 T 13-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 BEN78_13030 bcfaf4f4b10b62b26ca586eb9b02fcdf 199 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 BEN78_12825 32c6b010887652195fcafdf14fdee98a 782 Pfam PF13575 Domain of unknown function (DUF4135) 125 478 2.3E-37 T 13-10-2018 IPR025410 Lantibiotic biosynthesis protein, dehydration domain BEN78_13940 9e47f81ba771bff2de57bb81a6757312 267 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 82 1.1E-20 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN78_13940 9e47f81ba771bff2de57bb81a6757312 267 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 57 73 2.6E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN78_13940 9e47f81ba771bff2de57bb81a6757312 267 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 57 2.6E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN78_13940 9e47f81ba771bff2de57bb81a6757312 267 SUPERFAMILY SSF48008 111 248 2.88E-27 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal BEN78_13940 9e47f81ba771bff2de57bb81a6757312 267 SMART SM00895 113 241 2.8E-20 T 13-10-2018 IPR011711 GntR, C-terminal BEN78_13940 9e47f81ba771bff2de57bb81a6757312 267 Pfam PF07729 FCD domain 113 240 9.1E-24 T 13-10-2018 IPR011711 GntR, C-terminal BEN78_13940 9e47f81ba771bff2de57bb81a6757312 267 Gene3D G3DSA:1.10.10.10 13 83 1.5E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_13940 9e47f81ba771bff2de57bb81a6757312 267 SMART SM00345 24 83 2.1E-21 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN78_13940 9e47f81ba771bff2de57bb81a6757312 267 Gene3D G3DSA:1.20.120.530 111 249 3.1E-29 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal BEN78_13940 9e47f81ba771bff2de57bb81a6757312 267 SUPERFAMILY SSF46785 17 87 5.92E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_10055 f1b67ca55e11023d814d71089f4726a9 248 SUPERFAMILY SSF53335 5 194 1.41E-33 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_10055 f1b67ca55e11023d814d71089f4726a9 248 Gene3D G3DSA:3.40.50.150 7 228 6.1E-33 T 13-10-2018 BEN78_10055 f1b67ca55e11023d814d71089f4726a9 248 Pfam PF08241 Methyltransferase domain 25 118 4.7E-20 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 BEN78_12925 49902bd115bcf81123e99fddeace10d7 167 SUPERFAMILY SSF50800 18 164 2.72E-35 T 13-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily BEN78_12925 49902bd115bcf81123e99fddeace10d7 167 Pfam PF03473 MOSC domain 62 161 1.8E-6 T 13-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 BEN78_12925 49902bd115bcf81123e99fddeace10d7 167 Gene3D G3DSA:2.40.33.20 21 166 2.6E-20 T 13-10-2018 BEN78_03065 8eb7bfe5ae57674bbf556a8824eb7de4 497 Gene3D G3DSA:3.50.50.60 256 410 3.6E-38 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_03065 8eb7bfe5ae57674bbf556a8824eb7de4 497 SUPERFAMILY SSF46548 9 159 2.56E-38 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BEN78_03065 8eb7bfe5ae57674bbf556a8824eb7de4 497 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 8 483 1.8E-228 T 13-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 BEN78_03065 8eb7bfe5ae57674bbf556a8824eb7de4 497 SUPERFAMILY SSF51971 147 411 5.0E-63 T 13-10-2018 BEN78_03065 8eb7bfe5ae57674bbf556a8824eb7de4 497 Gene3D G3DSA:1.10.1060.10 25 145 1.4E-33 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BEN78_03065 8eb7bfe5ae57674bbf556a8824eb7de4 497 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 29 136 1.4E-37 T 13-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 BEN78_03065 8eb7bfe5ae57674bbf556a8824eb7de4 497 Gene3D G3DSA:3.40.50.720 146 255 1.9E-18 T 13-10-2018 BEN78_03065 8eb7bfe5ae57674bbf556a8824eb7de4 497 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 150 471 7.5E-21 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BEN78_03065 8eb7bfe5ae57674bbf556a8824eb7de4 497 PRINTS PR00419 Adrenodoxin reductase family signature 150 172 6.3E-28 T 13-10-2018 BEN78_03065 8eb7bfe5ae57674bbf556a8824eb7de4 497 PRINTS PR00419 Adrenodoxin reductase family signature 334 347 6.3E-28 T 13-10-2018 BEN78_03065 8eb7bfe5ae57674bbf556a8824eb7de4 497 PRINTS PR00419 Adrenodoxin reductase family signature 173 186 6.3E-28 T 13-10-2018 BEN78_03065 8eb7bfe5ae57674bbf556a8824eb7de4 497 PRINTS PR00419 Adrenodoxin reductase family signature 300 314 6.3E-28 T 13-10-2018 BEN78_06725 1a2d90f6c569ff46e77b733c85298ad0 206 SUPERFAMILY SSF49329 63 204 6.68E-40 T 13-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BEN78_06725 1a2d90f6c569ff46e77b733c85298ad0 206 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 193 204 - T 13-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BEN78_06725 1a2d90f6c569ff46e77b733c85298ad0 206 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 70 204 3.1E-38 T 13-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BEN78_06725 1a2d90f6c569ff46e77b733c85298ad0 206 Gene3D G3DSA:2.60.40.200 60 206 3.6E-44 T 13-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BEN78_06725 1a2d90f6c569ff46e77b733c85298ad0 206 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 102 112 - T 13-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BEN78_06725 1a2d90f6c569ff46e77b733c85298ad0 206 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 139 148 3.0E-7 T 13-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BEN78_06725 1a2d90f6c569ff46e77b733c85298ad0 206 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 102 124 3.0E-7 T 13-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BEN78_06725 1a2d90f6c569ff46e77b733c85298ad0 206 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 179 205 3.0E-7 T 13-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BEN78_15510 1716dd34104b680ef3386bde4875f846 1081 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 47 898 1.7E-153 T 13-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN78_15510 1716dd34104b680ef3386bde4875f846 1081 SUPERFAMILY SSF89550 46 233 1.94E-10 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 BEN78_15510 1716dd34104b680ef3386bde4875f846 1081 SMART SM00481 47 114 4.9E-12 T 13-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal BEN78_15510 1716dd34104b680ef3386bde4875f846 1081 Pfam PF14579 Helix-hairpin-helix motif 817 913 2.0E-21 T 13-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN78_15510 1716dd34104b680ef3386bde4875f846 1081 Gene3D G3DSA:3.20.20.140 23 292 4.7E-53 T 13-10-2018 BEN78_15510 1716dd34104b680ef3386bde4875f846 1081 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 315 736 3.1E-144 T 13-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN78_15510 1716dd34104b680ef3386bde4875f846 1081 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 46 1081 13.148 T 13-10-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN78_15510 1716dd34104b680ef3386bde4875f846 1081 Pfam PF01336 OB-fold nucleic acid binding domain 991 1064 1.3E-6 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 BEN78_15510 1716dd34104b680ef3386bde4875f846 1081 Pfam PF02811 PHP domain 48 157 1.5E-14 T 13-10-2018 IPR004013 PHP domain GO:0003824 BEN78_02050 5889d7d4f0e5a302b1c1db8e08203d57 214 PIRSF PIRSF033239 1 208 4.7E-47 T 13-10-2018 IPR010331 Exopolysaccharide synthesis, ExoD BEN78_02050 5889d7d4f0e5a302b1c1db8e08203d57 214 Pfam PF06055 Exopolysaccharide synthesis, ExoD 13 194 6.6E-47 T 13-10-2018 IPR010331 Exopolysaccharide synthesis, ExoD BEN78_12370 270a8c475ba652dc69cb1b6bc10641c0 326 Pfam PF01687 Riboflavin kinase 185 307 1.9E-34 T 13-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 BEN78_12370 270a8c475ba652dc69cb1b6bc10641c0 326 SUPERFAMILY SSF52374 18 176 9.57E-27 T 13-10-2018 BEN78_12370 270a8c475ba652dc69cb1b6bc10641c0 326 Pfam PF06574 FAD synthetase 13 167 2.1E-44 T 13-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 BEN78_12370 270a8c475ba652dc69cb1b6bc10641c0 326 SUPERFAMILY SSF82114 175 309 3.49E-43 T 13-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 BEN78_12370 270a8c475ba652dc69cb1b6bc10641c0 326 Gene3D G3DSA:2.40.30.30 187 320 1.6E-38 T 13-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 BEN78_12370 270a8c475ba652dc69cb1b6bc10641c0 326 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 20 307 4.0E-77 T 13-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 BEN78_12370 270a8c475ba652dc69cb1b6bc10641c0 326 SMART SM00904 184 308 6.6E-61 T 13-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 BEN78_12370 270a8c475ba652dc69cb1b6bc10641c0 326 PIRSF PIRSF004491 3 314 1.1E-92 T 13-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 BEN78_12370 270a8c475ba652dc69cb1b6bc10641c0 326 Gene3D G3DSA:3.40.50.620 4 186 4.6E-53 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_02725 e1cc032b1b0d5a3d3677de2f49001fb6 145 Gene3D G3DSA:3.30.420.270 63 136 3.8E-15 T 13-10-2018 BEN78_02725 e1cc032b1b0d5a3d3677de2f49001fb6 145 TIGRFAM TIGR02801 tolR: protein TolR 15 138 7.6E-38 T 13-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 BEN78_02725 e1cc032b1b0d5a3d3677de2f49001fb6 145 Pfam PF02472 Biopolymer transport protein ExbD/TolR 12 139 1.2E-26 T 13-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 BEN78_05640 6ed6f4d6d8743af1a8e622cd8ce68bb1 286 Pfam PF04366 Las17-binding protein actin regulator 103 208 2.2E-30 T 13-10-2018 IPR007461 Ysc84 actin-binding domain BEN78_07455 ea0e5e9c14772397c556934690c59280 502 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 9 485 7.2E-217 T 13-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 BEN78_07455 ea0e5e9c14772397c556934690c59280 502 Gene3D G3DSA:3.40.309.10 254 452 4.0E-146 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BEN78_07455 ea0e5e9c14772397c556934690c59280 502 Pfam PF00171 Aldehyde dehydrogenase family 16 481 2.6E-142 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BEN78_07455 ea0e5e9c14772397c556934690c59280 502 SUPERFAMILY SSF53720 5 488 4.58E-146 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BEN78_07455 ea0e5e9c14772397c556934690c59280 502 Gene3D G3DSA:3.40.605.10 23 480 4.0E-146 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BEN78_07455 ea0e5e9c14772397c556934690c59280 502 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 278 289 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 BEN78_07510 227c670cc2ac1c83a9119d08ab5061f5 391 Gene3D G3DSA:3.40.50.1820 125 376 1.0E-45 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_07510 227c670cc2ac1c83a9119d08ab5061f5 391 Gene3D G3DSA:1.20.1440.110 13 123 6.7E-27 T 13-10-2018 BEN78_07510 227c670cc2ac1c83a9119d08ab5061f5 391 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 49 256 3.6E-8 T 13-10-2018 IPR010520 UPF0255 family BEN78_07510 227c670cc2ac1c83a9119d08ab5061f5 391 SUPERFAMILY SSF53474 15 374 3.0E-60 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_08445 9bac156eedaff68b0fce1d21dd8994ef 159 Gene3D G3DSA:3.40.630.30 1 141 1.4E-32 T 13-10-2018 BEN78_08445 9bac156eedaff68b0fce1d21dd8994ef 159 SUPERFAMILY SSF55729 1 139 2.44E-25 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN78_08445 9bac156eedaff68b0fce1d21dd8994ef 159 Pfam PF13673 Acetyltransferase (GNAT) domain 38 140 8.2E-14 T 13-10-2018 IPR000182 GNAT domain BEN78_09790 9ded7f7c43a755c2d33cd5baf0d395b9 99 Gene3D G3DSA:1.10.20.30 2 49 8.0E-17 T 13-10-2018 BEN78_09790 9ded7f7c43a755c2d33cd5baf0d395b9 99 Gene3D G3DSA:1.20.5.50 51 97 9.5E-7 T 13-10-2018 BEN78_09790 9ded7f7c43a755c2d33cd5baf0d395b9 99 Pfam PF05164 Cell division protein ZapA 8 92 4.5E-20 T 13-10-2018 IPR007838 Cell division protein ZapA-like BEN78_09790 9ded7f7c43a755c2d33cd5baf0d395b9 99 SUPERFAMILY SSF102829 8 94 8.89E-21 T 13-10-2018 IPR036192 Cell division protein ZapA-like superfamily BEN78_03475 ec769802162e1507a5d5247164e4f8f6 298 Gene3D G3DSA:3.30.470.20 107 250 9.4E-59 T 13-10-2018 BEN78_03475 ec769802162e1507a5d5247164e4f8f6 298 Pfam PF01259 SAICAR synthetase 17 269 2.8E-99 T 13-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BEN78_03475 ec769802162e1507a5d5247164e4f8f6 298 SUPERFAMILY SSF56104 5 294 2.94E-100 T 13-10-2018 BEN78_03475 ec769802162e1507a5d5247164e4f8f6 298 Gene3D G3DSA:3.30.200.20 3 105 2.1E-30 T 13-10-2018 BEN78_03475 ec769802162e1507a5d5247164e4f8f6 298 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 13 294 27.096 T 13-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BEN78_03475 ec769802162e1507a5d5247164e4f8f6 298 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 18 293 2.1E-72 T 13-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 BEN78_03475 ec769802162e1507a5d5247164e4f8f6 298 ProSitePatterns PS01057 SAICAR synthetase signature 1. 107 121 - T 13-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BEN78_03475 ec769802162e1507a5d5247164e4f8f6 298 ProSitePatterns PS01058 SAICAR synthetase signature 2. 206 214 - T 13-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BEN78_05735 be35df1f00be23dca90d168c6f81b789 373 Gene3D G3DSA:3.40.50.1100 35 327 1.8E-66 T 13-10-2018 BEN78_05735 be35df1f00be23dca90d168c6f81b789 373 SUPERFAMILY SSF53686 6 340 8.91E-67 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BEN78_05735 be35df1f00be23dca90d168c6f81b789 373 Gene3D G3DSA:3.40.50.1100 50 156 1.8E-66 T 13-10-2018 BEN78_05735 be35df1f00be23dca90d168c6f81b789 373 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 31 320 1.2E-46 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BEN78_15860 420785ce938aad253254a8810fdba047 269 SMART SM01232 126 218 8.1E-15 T 13-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 BEN78_15860 420785ce938aad253254a8810fdba047 269 Gene3D G3DSA:1.10.8.50 128 269 1.1E-30 T 13-10-2018 BEN78_15860 420785ce938aad253254a8810fdba047 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 89 1.2E-7 T 13-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 BEN78_15860 420785ce938aad253254a8810fdba047 269 SUPERFAMILY SSF57716 232 268 9.41E-9 T 13-10-2018 BEN78_15860 420785ce938aad253254a8810fdba047 269 Gene3D G3DSA:3.20.190.10 2 127 1.3E-21 T 13-10-2018 IPR035937 MutM-like, N-terminal BEN78_15860 420785ce938aad253254a8810fdba047 269 SUPERFAMILY SSF46946 126 211 5.3E-17 T 13-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 BEN78_15860 420785ce938aad253254a8810fdba047 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 126 209 2.6E-11 T 13-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 BEN78_15860 420785ce938aad253254a8810fdba047 269 SUPERFAMILY SSF81624 2 133 5.1E-19 T 13-10-2018 IPR035937 MutM-like, N-terminal BEN78_15860 420785ce938aad253254a8810fdba047 269 SMART SM00898 2 104 1.0E-7 T 13-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 BEN78_15860 420785ce938aad253254a8810fdba047 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 269 3.9E-5 T 13-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 BEN78_09435 7be30a2f58e32a749b8e101fb4a384e1 245 PRINTS PR00599 Methionine aminopeptidase-1 signature 66 79 1.9E-18 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BEN78_09435 7be30a2f58e32a749b8e101fb4a384e1 245 PRINTS PR00599 Methionine aminopeptidase-1 signature 88 104 1.9E-18 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BEN78_09435 7be30a2f58e32a749b8e101fb4a384e1 245 PRINTS PR00599 Methionine aminopeptidase-1 signature 190 202 1.9E-18 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BEN78_09435 7be30a2f58e32a749b8e101fb4a384e1 245 PRINTS PR00599 Methionine aminopeptidase-1 signature 158 170 1.9E-18 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BEN78_09435 7be30a2f58e32a749b8e101fb4a384e1 245 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 1 245 7.4E-74 T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 BEN78_09435 7be30a2f58e32a749b8e101fb4a384e1 245 SUPERFAMILY SSF55920 2 245 1.7E-65 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like BEN78_09435 7be30a2f58e32a749b8e101fb4a384e1 245 Gene3D G3DSA:3.90.230.10 1 245 2.6E-75 T 13-10-2018 BEN78_09435 7be30a2f58e32a749b8e101fb4a384e1 245 Hamap MF_01974 Methionine aminopeptidase [map]. 1 245 31.07 T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 BEN78_09435 7be30a2f58e32a749b8e101fb4a384e1 245 Pfam PF00557 Metallopeptidase family M24 11 237 1.9E-43 T 13-10-2018 IPR000994 Peptidase M24 BEN78_05920 f2bb3e74bfd1c31355fe4ac31d4acb3d 102 Gene3D G3DSA:1.10.10.10 5 102 1.8E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_05920 f2bb3e74bfd1c31355fe4ac31d4acb3d 102 SMART SM00418 19 98 4.0E-22 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BEN78_05920 f2bb3e74bfd1c31355fe4ac31d4acb3d 102 SUPERFAMILY SSF46785 14 101 1.18E-24 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_05920 f2bb3e74bfd1c31355fe4ac31d4acb3d 102 Pfam PF01022 Bacterial regulatory protein, arsR family 26 71 9.1E-13 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BEN78_05920 f2bb3e74bfd1c31355fe4ac31d4acb3d 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 54 69 5.9E-10 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BEN78_05920 f2bb3e74bfd1c31355fe4ac31d4acb3d 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 21 36 5.9E-10 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BEN78_05920 f2bb3e74bfd1c31355fe4ac31d4acb3d 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 69 84 5.9E-10 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BEN78_03120 687df44934044467b295d51a0eb2e016 289 Gene3D G3DSA:3.40.50.1380 152 288 1.0E-40 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily BEN78_03120 687df44934044467b295d51a0eb2e016 289 Gene3D G3DSA:3.40.50.1380 11 136 1.7E-9 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily BEN78_03120 687df44934044467b295d51a0eb2e016 289 SUPERFAMILY SSF52335 150 284 1.72E-31 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily BEN78_03120 687df44934044467b295d51a0eb2e016 289 SUPERFAMILY SSF52335 12 136 7.55E-18 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily BEN78_03120 687df44934044467b295d51a0eb2e016 289 ProSitePatterns PS01335 Methylglyoxal synthase active site. 216 224 - T 13-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 BEN78_02485 5ec15054b05761022c3a729c48ecd3ec 435 Pfam PF04389 Peptidase family M28 221 410 4.8E-25 T 13-10-2018 IPR007484 Peptidase M28 BEN78_02485 5ec15054b05761022c3a729c48ecd3ec 435 Gene3D G3DSA:3.50.30.30 65 210 5.9E-137 T 13-10-2018 BEN78_02485 5ec15054b05761022c3a729c48ecd3ec 435 Gene3D G3DSA:3.40.630.10 12 411 5.9E-137 T 13-10-2018 BEN78_02485 5ec15054b05761022c3a729c48ecd3ec 435 SUPERFAMILY SSF53187 11 420 1.77E-52 T 13-10-2018 BEN78_14130 543e003610184f320cd3985ecf3c8e29 334 Gene3D G3DSA:3.40.190.10 165 267 6.2E-61 T 13-10-2018 BEN78_14130 543e003610184f320cd3985ecf3c8e29 334 Gene3D G3DSA:1.10.10.10 2 91 7.0E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_14130 543e003610184f320cd3985ecf3c8e29 334 SUPERFAMILY SSF53850 89 298 1.13E-41 T 13-10-2018 BEN78_14130 543e003610184f320cd3985ecf3c8e29 334 Gene3D G3DSA:3.40.190.10 92 293 6.2E-61 T 13-10-2018 BEN78_14130 543e003610184f320cd3985ecf3c8e29 334 Pfam PF03466 LysR substrate binding domain 88 295 6.9E-43 T 13-10-2018 IPR005119 LysR, substrate-binding BEN78_14130 543e003610184f320cd3985ecf3c8e29 334 SUPERFAMILY SSF46785 3 87 2.98E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_14130 543e003610184f320cd3985ecf3c8e29 334 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 6.6E-17 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_13305 94048db74f9d4f3698b355cbb5310688 616 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 50 210 5.6E-18 T 13-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like BEN78_16485 329d41388c9ed7b083882e9c9e93c282 676 Pfam PF00326 Prolyl oligopeptidase family 447 653 2.6E-44 T 13-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 BEN78_16485 329d41388c9ed7b083882e9c9e93c282 676 SUPERFAMILY SSF82171 32 392 8.5E-35 T 13-10-2018 BEN78_16485 329d41388c9ed7b083882e9c9e93c282 676 Gene3D G3DSA:2.130.10.10 177 374 1.9E-7 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BEN78_16485 329d41388c9ed7b083882e9c9e93c282 676 Pfam PF07676 WD40-like Beta Propeller Repeat 90 110 8.4E-4 T 13-10-2018 IPR011659 WD40-like Beta Propeller BEN78_16485 329d41388c9ed7b083882e9c9e93c282 676 Pfam PF07676 WD40-like Beta Propeller Repeat 247 266 0.21 T 13-10-2018 IPR011659 WD40-like Beta Propeller BEN78_16485 329d41388c9ed7b083882e9c9e93c282 676 Gene3D G3DSA:3.40.50.1820 375 654 1.5E-69 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_16485 329d41388c9ed7b083882e9c9e93c282 676 Gene3D G3DSA:2.120.10.30 3 176 2.2E-22 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BEN78_16485 329d41388c9ed7b083882e9c9e93c282 676 SUPERFAMILY SSF53474 396 653 3.74E-64 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_14870 231d74b47755f97756ef8fd6978ef16e 273 Pfam PF03618 Kinase/pyrophosphorylase 7 263 7.1E-74 T 13-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 BEN78_14870 231d74b47755f97756ef8fd6978ef16e 273 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 4 272 71.031 T 13-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein BEN78_09245 cb7c8bb6786e0ed9c644ebbd25f15656 924 SUPERFAMILY SSF81301 24 278 2.04E-68 T 13-10-2018 BEN78_09245 cb7c8bb6786e0ed9c644ebbd25f15656 924 Gene3D G3DSA:1.20.120.330 793 921 5.4E-26 T 13-10-2018 BEN78_09245 cb7c8bb6786e0ed9c644ebbd25f15656 924 SUPERFAMILY SSF81301 517 796 1.09E-70 T 13-10-2018 BEN78_09245 cb7c8bb6786e0ed9c644ebbd25f15656 924 Gene3D G3DSA:1.20.120.1510 441 550 1.0E-23 T 13-10-2018 BEN78_09245 cb7c8bb6786e0ed9c644ebbd25f15656 924 SUPERFAMILY SSF81593 798 905 7.22E-22 T 13-10-2018 BEN78_09245 cb7c8bb6786e0ed9c644ebbd25f15656 924 SUPERFAMILY SSF81593 279 428 9.42E-40 T 13-10-2018 BEN78_09245 cb7c8bb6786e0ed9c644ebbd25f15656 924 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 29 923 18.04 T 13-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 BEN78_09245 cb7c8bb6786e0ed9c644ebbd25f15656 924 Gene3D G3DSA:1.20.120.330 277 431 1.6E-53 T 13-10-2018 BEN78_09245 cb7c8bb6786e0ed9c644ebbd25f15656 924 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 543 785 4.2E-69 T 13-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 BEN78_09245 cb7c8bb6786e0ed9c644ebbd25f15656 924 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 32 268 7.1E-61 T 13-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 BEN78_09245 cb7c8bb6786e0ed9c644ebbd25f15656 924 Pfam PF08335 GlnD PII-uridylyltransferase 807 889 3.9E-7 T 13-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 BEN78_09245 cb7c8bb6786e0ed9c644ebbd25f15656 924 Pfam PF08335 GlnD PII-uridylyltransferase 289 427 8.1E-41 T 13-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 BEN78_09245 cb7c8bb6786e0ed9c644ebbd25f15656 924 Gene3D G3DSA:3.30.460.100 552 792 4.3E-74 T 13-10-2018 BEN78_09245 cb7c8bb6786e0ed9c644ebbd25f15656 924 Gene3D G3DSA:3.30.460.100 41 273 9.8E-62 T 13-10-2018 BEN78_07775 8dc4c116c1922cac3adc0d7646406e00 476 TIGRFAM TIGR03915 SAM_7_link_chp: probable DNA metabolism protein 21 244 8.6E-64 T 13-10-2018 IPR023875 DNA metabolism protein, putative BEN78_07775 8dc4c116c1922cac3adc0d7646406e00 476 SMART SM00987 311 471 7.7E-38 T 13-10-2018 BEN78_07775 8dc4c116c1922cac3adc0d7646406e00 476 Pfam PF03167 Uracil DNA glycosylase superfamily 311 463 1.2E-35 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BEN78_07775 8dc4c116c1922cac3adc0d7646406e00 476 SUPERFAMILY SSF52141 284 459 1.31E-53 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BEN78_07775 8dc4c116c1922cac3adc0d7646406e00 476 Pfam PF13566 Domain of unknown function (DUF4130 86 243 5.1E-44 T 13-10-2018 IPR025404 Domain of unknown function DUF4130 BEN78_07775 8dc4c116c1922cac3adc0d7646406e00 476 Gene3D G3DSA:3.40.470.10 279 475 2.2E-58 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BEN78_07775 8dc4c116c1922cac3adc0d7646406e00 476 TIGRFAM TIGR03914 UDG_fam_dom: uracil-DNA glycosylase family domain 246 472 7.9E-92 T 13-10-2018 IPR005273 Uracil-DNA glycosylase family 4 BEN78_07775 8dc4c116c1922cac3adc0d7646406e00 476 SMART SM00986 311 471 7.7E-38 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BEN78_03690 bab820e8c2cc18bc1fbbd26a846313f6 326 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 13-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 BEN78_03690 bab820e8c2cc18bc1fbbd26a846313f6 326 Gene3D G3DSA:3.20.20.70 8 249 1.2E-73 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_03690 bab820e8c2cc18bc1fbbd26a846313f6 326 Pfam PF01207 Dihydrouridine synthase (Dus) 13 314 1.8E-76 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 BEN78_03690 bab820e8c2cc18bc1fbbd26a846313f6 326 PIRSF PIRSF006621 3 320 1.4E-77 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 BEN78_03690 bab820e8c2cc18bc1fbbd26a846313f6 326 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 4 324 46.793 T 13-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 BEN78_03690 bab820e8c2cc18bc1fbbd26a846313f6 326 Gene3D G3DSA:1.20.120.1460 251 323 8.8E-18 T 13-10-2018 BEN78_03690 bab820e8c2cc18bc1fbbd26a846313f6 326 SUPERFAMILY SSF51395 10 303 6.72E-71 T 13-10-2018 BEN78_15165 b9ed7f929948dba31686fc59eae00a5e 205 Gene3D G3DSA:1.10.10.10 9 69 5.1E-15 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_15165 b9ed7f929948dba31686fc59eae00a5e 205 SUPERFAMILY SSF46785 3 72 2.72E-12 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_15165 b9ed7f929948dba31686fc59eae00a5e 205 SMART SM00345 10 68 3.3E-4 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN78_15165 b9ed7f929948dba31686fc59eae00a5e 205 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 68 1.0E-12 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN78_10595 dec7f7012d3429e41191c597ea2e0521 351 SUPERFAMILY SSF53474 42 338 2.13E-47 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_10595 dec7f7012d3429e41191c597ea2e0521 351 PIRSF PIRSF000443 43 349 1.1E-60 T 13-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 BEN78_10595 dec7f7012d3429e41191c597ea2e0521 351 Pfam PF00561 alpha/beta hydrolase fold 66 330 1.9E-14 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN78_10595 dec7f7012d3429e41191c597ea2e0521 351 Gene3D G3DSA:3.40.50.1820 45 349 2.8E-65 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_13635 764dfddde88f1652c9a5f66f9254b7a5 196 PRINTS PR01011 Glutathione peroxidase family signature 89 105 4.8E-11 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 BEN78_13635 764dfddde88f1652c9a5f66f9254b7a5 196 PRINTS PR01011 Glutathione peroxidase family signature 54 71 4.8E-11 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 BEN78_13635 764dfddde88f1652c9a5f66f9254b7a5 196 PRINTS PR01011 Glutathione peroxidase family signature 150 159 4.8E-11 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 BEN78_13635 764dfddde88f1652c9a5f66f9254b7a5 196 SUPERFAMILY SSF52833 36 188 6.87E-45 T 13-10-2018 IPR036249 Thioredoxin-like superfamily BEN78_13635 764dfddde88f1652c9a5f66f9254b7a5 196 Pfam PF00255 Glutathione peroxidase 43 142 3.2E-29 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 BEN78_13635 764dfddde88f1652c9a5f66f9254b7a5 196 PIRSF PIRSF000303 7 191 7.2E-54 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 BEN78_13635 764dfddde88f1652c9a5f66f9254b7a5 196 Gene3D G3DSA:3.40.30.10 23 192 1.5E-46 T 13-10-2018 BEN78_05330 85c98e9d4749edbda98fd8a1da6ee657 223 Gene3D G3DSA:1.10.510.10 97 182 4.5E-6 T 13-10-2018 BEN78_05330 85c98e9d4749edbda98fd8a1da6ee657 223 SUPERFAMILY SSF56112 12 153 8.2E-14 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily BEN78_03445 78625a511f490bc35949c4b5c06cbb52 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 3.6E-14 T 13-10-2018 BEN78_03445 78625a511f490bc35949c4b5c06cbb52 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 3.6E-14 T 13-10-2018 BEN78_03445 78625a511f490bc35949c4b5c06cbb52 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 3.6E-14 T 13-10-2018 BEN78_03445 78625a511f490bc35949c4b5c06cbb52 192 SUPERFAMILY SSF52317 2 191 4.58E-56 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN78_03445 78625a511f490bc35949c4b5c06cbb52 192 Pfam PF00117 Glutamine amidotransferase class-I 4 190 5.8E-55 T 13-10-2018 IPR017926 Glutamine amidotransferase BEN78_03445 78625a511f490bc35949c4b5c06cbb52 192 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 192 6.1E-82 T 13-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BEN78_03445 78625a511f490bc35949c4b5c06cbb52 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 3.9E-6 T 13-10-2018 BEN78_03445 78625a511f490bc35949c4b5c06cbb52 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 3.9E-6 T 13-10-2018 BEN78_03445 78625a511f490bc35949c4b5c06cbb52 192 Gene3D G3DSA:3.40.50.880 1 192 3.7E-63 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN78_03445 78625a511f490bc35949c4b5c06cbb52 192 PRINTS PR00097 Anthranilate synthase component II signature 47 56 3.6E-36 T 13-10-2018 BEN78_03445 78625a511f490bc35949c4b5c06cbb52 192 PRINTS PR00097 Anthranilate synthase component II signature 119 131 3.6E-36 T 13-10-2018 BEN78_03445 78625a511f490bc35949c4b5c06cbb52 192 PRINTS PR00097 Anthranilate synthase component II signature 99 107 3.6E-36 T 13-10-2018 BEN78_03445 78625a511f490bc35949c4b5c06cbb52 192 PRINTS PR00097 Anthranilate synthase component II signature 74 85 3.6E-36 T 13-10-2018 BEN78_03445 78625a511f490bc35949c4b5c06cbb52 192 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.6E-36 T 13-10-2018 BEN78_03445 78625a511f490bc35949c4b5c06cbb52 192 PRINTS PR00097 Anthranilate synthase component II signature 2 16 3.6E-36 T 13-10-2018 BEN78_15190 7af6db76089cff62c7e3e894ee9b0e78 88 Pfam PF13560 Helix-turn-helix domain 16 71 2.5E-8 T 13-10-2018 BEN78_15190 7af6db76089cff62c7e3e894ee9b0e78 88 Gene3D G3DSA:1.10.260.40 1 81 6.2E-27 T 13-10-2018 BEN78_15190 7af6db76089cff62c7e3e894ee9b0e78 88 SMART SM00530 17 72 4.4E-7 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN78_15190 7af6db76089cff62c7e3e894ee9b0e78 88 SUPERFAMILY SSF47413 10 76 1.13E-10 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN78_12195 4fcdd91196178aff7fdf44c1a917d3ac 257 Pfam PF13545 Crp-like helix-turn-helix domain 179 253 3.2E-19 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BEN78_12195 4fcdd91196178aff7fdf44c1a917d3ac 257 SMART SM00100 44 162 1.4E-11 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain BEN78_12195 4fcdd91196178aff7fdf44c1a917d3ac 257 Pfam PF00027 Cyclic nucleotide-binding domain 63 147 9.9E-16 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain BEN78_12195 4fcdd91196178aff7fdf44c1a917d3ac 257 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 204 220 3.2E-10 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BEN78_12195 4fcdd91196178aff7fdf44c1a917d3ac 257 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 220 235 3.2E-10 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BEN78_12195 4fcdd91196178aff7fdf44c1a917d3ac 257 Gene3D G3DSA:2.60.120.10 48 174 3.1E-31 T 13-10-2018 IPR014710 RmlC-like jelly roll fold BEN78_12195 4fcdd91196178aff7fdf44c1a917d3ac 257 SUPERFAMILY SSF46785 178 254 2.73E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_12195 4fcdd91196178aff7fdf44c1a917d3ac 257 SMART SM00419 198 247 1.2E-14 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BEN78_12195 4fcdd91196178aff7fdf44c1a917d3ac 257 SUPERFAMILY SSF51206 37 173 8.77E-27 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like BEN78_12195 4fcdd91196178aff7fdf44c1a917d3ac 257 Gene3D G3DSA:1.10.10.10 178 256 2.3E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_11390 d52648a756eb14a506341b20d83084ba 275 SUPERFAMILY SSF47240 60 246 3.75E-21 T 13-10-2018 IPR009078 Ferritin-like superfamily BEN78_11390 d52648a756eb14a506341b20d83084ba 275 Pfam PF04305 Protein of unknown function (DUF455) 22 266 5.0E-99 T 13-10-2018 IPR007402 Protein of unknown function DUF455 BEN78_11390 d52648a756eb14a506341b20d83084ba 275 PIRSF PIRSF012318 4 275 3.0E-105 T 13-10-2018 IPR011197 Uncharacterised conserved protein UCP012318 BEN78_01105 313dc4272f9d82986383528d2138b087 71 Pfam PF02599 Global regulator protein family 1 52 1.5E-26 T 13-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 BEN78_01105 313dc4272f9d82986383528d2138b087 71 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 53 7.1E-27 T 13-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 BEN78_01105 313dc4272f9d82986383528d2138b087 71 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 8.0E-20 T 13-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 BEN78_01105 313dc4272f9d82986383528d2138b087 71 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 70 17.474 T 13-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 BEN78_01105 313dc4272f9d82986383528d2138b087 71 SUPERFAMILY SSF117130 1 53 2.88E-20 T 13-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 BEN78_01105 313dc4272f9d82986383528d2138b087 71 Gene3D G3DSA:3.30.70.1680 1 60 5.0E-28 T 13-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 BEN78_07250 512427475712e34f0ee400610126a841 529 SUPERFAMILY SSF53187 14 505 7.19E-55 T 13-10-2018 BEN78_07250 512427475712e34f0ee400610126a841 529 Pfam PF02225 PA domain 114 192 3.2E-5 T 13-10-2018 IPR003137 PA domain BEN78_07250 512427475712e34f0ee400610126a841 529 Gene3D G3DSA:3.40.630.10 32 480 1.9E-47 T 13-10-2018 BEN78_07250 512427475712e34f0ee400610126a841 529 Gene3D G3DSA:3.50.30.30 78 269 1.9E-47 T 13-10-2018 BEN78_07250 512427475712e34f0ee400610126a841 529 Pfam PF04389 Peptidase family M28 279 496 1.1E-42 T 13-10-2018 IPR007484 Peptidase M28 BEN78_05880 cb1399cd9ee56aa2d53834a3a6331ac5 92 Gene3D G3DSA:1.10.10.10 3 85 9.6E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_05880 cb1399cd9ee56aa2d53834a3a6331ac5 92 Pfam PF11625 Protein of unknown function (DUF3253) 7 84 2.8E-24 T 13-10-2018 IPR021660 Protein of unknown function DUF3253 BEN78_05880 cb1399cd9ee56aa2d53834a3a6331ac5 92 SUPERFAMILY SSF46785 7 85 5.44E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_09640 b5dfecc5de6109c9586804b3d40aba32 189 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 13-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 BEN78_09640 b5dfecc5de6109c9586804b3d40aba32 189 ProSitePatterns PS00398 Site-specific recombinases signature 2. 57 69 - T 13-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 BEN78_09640 b5dfecc5de6109c9586804b3d40aba32 189 Gene3D G3DSA:3.40.50.1390 3 127 5.6E-44 T 13-10-2018 BEN78_09640 b5dfecc5de6109c9586804b3d40aba32 189 SUPERFAMILY SSF53041 1 138 5.49E-44 T 13-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 BEN78_09640 b5dfecc5de6109c9586804b3d40aba32 189 SMART SM00857 3 138 3.0E-57 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 BEN78_09640 b5dfecc5de6109c9586804b3d40aba32 189 Pfam PF00239 Resolvase, N terminal domain 4 138 1.4E-44 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 BEN78_08690 02661ff5617f6efd2352436af7757e8c 1889 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 1453 1889 6.4E-54 T 13-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 BEN78_08690 02661ff5617f6efd2352436af7757e8c 1889 SUPERFAMILY SSF51126 375 605 5.96E-5 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor BEN78_08690 02661ff5617f6efd2352436af7757e8c 1889 Pfam PF12951 Passenger-associated-transport-repeat 783 811 2.2E-7 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08690 02661ff5617f6efd2352436af7757e8c 1889 Pfam PF12951 Passenger-associated-transport-repeat 1087 1116 1.1E-9 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08690 02661ff5617f6efd2352436af7757e8c 1889 Pfam PF12951 Passenger-associated-transport-repeat 1381 1408 0.0052 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08690 02661ff5617f6efd2352436af7757e8c 1889 Pfam PF12951 Passenger-associated-transport-repeat 196 223 3.1E-7 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08690 02661ff5617f6efd2352436af7757e8c 1889 Pfam PF12951 Passenger-associated-transport-repeat 262 291 3.0E-8 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08690 02661ff5617f6efd2352436af7757e8c 1889 Pfam PF12951 Passenger-associated-transport-repeat 1312 1341 2.6E-7 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08690 02661ff5617f6efd2352436af7757e8c 1889 Pfam PF12951 Passenger-associated-transport-repeat 641 666 8.6E-7 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08690 02661ff5617f6efd2352436af7757e8c 1889 Pfam PF12951 Passenger-associated-transport-repeat 1244 1273 3.8E-7 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08690 02661ff5617f6efd2352436af7757e8c 1889 Pfam PF12951 Passenger-associated-transport-repeat 569 598 1.3E-9 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08690 02661ff5617f6efd2352436af7757e8c 1889 Pfam PF12951 Passenger-associated-transport-repeat 707 734 8.0E-7 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08690 02661ff5617f6efd2352436af7757e8c 1889 Pfam PF12951 Passenger-associated-transport-repeat 1176 1205 4.6E-10 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08690 02661ff5617f6efd2352436af7757e8c 1889 SUPERFAMILY SSF103515 1592 1889 6.41E-37 T 13-10-2018 IPR036709 Autotransporter beta-domain superfamily BEN78_08690 02661ff5617f6efd2352436af7757e8c 1889 SUPERFAMILY SSF51126 893 1136 1.79E-7 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor BEN78_08690 02661ff5617f6efd2352436af7757e8c 1889 SUPERFAMILY SSF51126 612 897 1.51E-24 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor BEN78_08690 02661ff5617f6efd2352436af7757e8c 1889 SUPERFAMILY SSF51126 13 375 1.76E-17 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor BEN78_08690 02661ff5617f6efd2352436af7757e8c 1889 Gene3D G3DSA:2.160.20.20 1399 1571 2.0E-36 T 13-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily BEN78_08690 02661ff5617f6efd2352436af7757e8c 1889 SMART SM00869 1614 1873 1.7E-30 T 13-10-2018 IPR005546 Autotransporter beta-domain BEN78_08690 02661ff5617f6efd2352436af7757e8c 1889 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1380 1409 5.2E-7 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08690 02661ff5617f6efd2352436af7757e8c 1889 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1175 1206 2.2E-9 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08690 02661ff5617f6efd2352436af7757e8c 1889 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 568 599 2.9E-9 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08690 02661ff5617f6efd2352436af7757e8c 1889 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1244 1274 6.7E-9 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08690 02661ff5617f6efd2352436af7757e8c 1889 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 706 735 4.0E-9 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08690 02661ff5617f6efd2352436af7757e8c 1889 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 640 667 3.5E-9 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08690 02661ff5617f6efd2352436af7757e8c 1889 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 261 292 5.7E-10 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08690 02661ff5617f6efd2352436af7757e8c 1889 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 782 812 6.1E-10 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08690 02661ff5617f6efd2352436af7757e8c 1889 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 193 224 6.6E-8 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08690 02661ff5617f6efd2352436af7757e8c 1889 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1086 1116 2.9E-11 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08690 02661ff5617f6efd2352436af7757e8c 1889 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1312 1342 2.6E-9 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat BEN78_08690 02661ff5617f6efd2352436af7757e8c 1889 Gene3D G3DSA:2.40.128.130 1581 1889 3.2E-57 T 13-10-2018 IPR036709 Autotransporter beta-domain superfamily BEN78_08690 02661ff5617f6efd2352436af7757e8c 1889 SUPERFAMILY SSF51126 1219 1569 1.88E-42 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor BEN78_02795 f01f5bd83ba734c6f13c474e8b1a5dc2 196 SUPERFAMILY SSF47781 67 135 6.35E-21 T 13-10-2018 IPR010994 RuvA domain 2-like BEN78_02795 f01f5bd83ba734c6f13c474e8b1a5dc2 196 SMART SM00278 73 92 4.3 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BEN78_02795 f01f5bd83ba734c6f13c474e8b1a5dc2 196 SMART SM00278 108 127 0.013 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BEN78_02795 f01f5bd83ba734c6f13c474e8b1a5dc2 196 Pfam PF14520 Helix-hairpin-helix domain 72 130 3.8E-19 T 13-10-2018 BEN78_02795 f01f5bd83ba734c6f13c474e8b1a5dc2 196 Gene3D G3DSA:1.10.8.10 149 195 7.4E-12 T 13-10-2018 BEN78_02795 f01f5bd83ba734c6f13c474e8b1a5dc2 196 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 195 30.401 T 13-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 BEN78_02795 f01f5bd83ba734c6f13c474e8b1a5dc2 196 Pfam PF07499 RuvA, C-terminal domain 150 193 2.6E-9 T 13-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 BEN78_02795 f01f5bd83ba734c6f13c474e8b1a5dc2 196 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 195 6.2E-49 T 13-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 BEN78_02795 f01f5bd83ba734c6f13c474e8b1a5dc2 196 Pfam PF01330 RuvA N terminal domain 1 62 2.4E-20 T 13-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 BEN78_02795 f01f5bd83ba734c6f13c474e8b1a5dc2 196 Gene3D G3DSA:1.10.150.20 67 137 2.7E-26 T 13-10-2018 BEN78_02795 f01f5bd83ba734c6f13c474e8b1a5dc2 196 SUPERFAMILY SSF46929 150 193 9.03E-8 T 13-10-2018 IPR036267 RuvA, C-terminal domain superfamily BEN78_02795 f01f5bd83ba734c6f13c474e8b1a5dc2 196 Gene3D G3DSA:2.40.50.140 1 65 1.0E-25 T 13-10-2018 BEN78_02795 f01f5bd83ba734c6f13c474e8b1a5dc2 196 SUPERFAMILY SSF50249 1 63 1.48E-17 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN78_03455 c2ba6a975d40bd026e02a75132361810 494 SUPERFAMILY SSF56322 16 487 1.03E-153 T 13-10-2018 IPR005801 ADC synthase GO:0009058 BEN78_03455 c2ba6a975d40bd026e02a75132361810 494 Pfam PF04715 Anthranilate synthase component I, N terminal region 27 173 1.3E-25 T 13-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BEN78_03455 c2ba6a975d40bd026e02a75132361810 494 PRINTS PR00095 Anthranilate synthase component I signature 327 340 6.2E-22 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BEN78_03455 c2ba6a975d40bd026e02a75132361810 494 PRINTS PR00095 Anthranilate synthase component I signature 436 450 6.2E-22 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BEN78_03455 c2ba6a975d40bd026e02a75132361810 494 PRINTS PR00095 Anthranilate synthase component I signature 421 435 6.2E-22 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BEN78_03455 c2ba6a975d40bd026e02a75132361810 494 PRINTS PR00095 Anthranilate synthase component I signature 341 354 6.2E-22 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BEN78_03455 c2ba6a975d40bd026e02a75132361810 494 Gene3D G3DSA:3.60.120.10 1 493 7.6E-176 T 13-10-2018 IPR005801 ADC synthase GO:0009058 BEN78_03455 c2ba6a975d40bd026e02a75132361810 494 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 27 487 1.4E-162 T 13-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BEN78_03455 c2ba6a975d40bd026e02a75132361810 494 Pfam PF00425 chorismate binding enzyme 226 479 1.9E-97 T 13-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal BEN78_03325 e3f3f3cdbaf6e8af4184ddb84fa93d08 388 PIRSF PIRSF001434 1 388 4.8E-143 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BEN78_03325 e3f3f3cdbaf6e8af4184ddb84fa93d08 388 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 12 385 1.2E-149 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BEN78_03325 e3f3f3cdbaf6e8af4184ddb84fa93d08 388 Gene3D G3DSA:3.90.1150.10 254 387 7.3E-54 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN78_03325 e3f3f3cdbaf6e8af4184ddb84fa93d08 388 Gene3D G3DSA:3.40.640.10 9 253 7.4E-92 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN78_03325 e3f3f3cdbaf6e8af4184ddb84fa93d08 388 SUPERFAMILY SSF53383 10 386 1.02E-115 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_12150 e2ac3b34b1b08b6bbfec023cd09296e3 403 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 318 9.9E-109 T 13-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BEN78_12150 e2ac3b34b1b08b6bbfec023cd09296e3 403 Gene3D G3DSA:3.40.50.720 1 401 2.6E-175 T 13-10-2018 BEN78_12150 e2ac3b34b1b08b6bbfec023cd09296e3 403 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 396 55.978 T 13-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BEN78_12150 e2ac3b34b1b08b6bbfec023cd09296e3 403 SUPERFAMILY SSF51735 42 297 3.2E-5 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_12150 e2ac3b34b1b08b6bbfec023cd09296e3 403 Pfam PF07055 Enoyl reductase FAD binding domain 327 390 6.6E-32 T 13-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BEN78_12150 e2ac3b34b1b08b6bbfec023cd09296e3 403 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 80 3.6E-35 T 13-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BEN78_03470 173cb24d675758ee6d9e4c3d30c77469 114 SUPERFAMILY SSF46565 43 103 1.7E-17 T 13-10-2018 IPR036869 Chaperone J-domain superfamily BEN78_03470 173cb24d675758ee6d9e4c3d30c77469 114 Pfam PF00226 DnaJ domain 47 103 1.3E-10 T 13-10-2018 IPR001623 DnaJ domain BEN78_03470 173cb24d675758ee6d9e4c3d30c77469 114 PRINTS PR00625 DnaJ domain signature 65 80 4.1E-8 T 13-10-2018 IPR001623 DnaJ domain BEN78_03470 173cb24d675758ee6d9e4c3d30c77469 114 PRINTS PR00625 DnaJ domain signature 47 65 4.1E-8 T 13-10-2018 IPR001623 DnaJ domain BEN78_03470 173cb24d675758ee6d9e4c3d30c77469 114 PRINTS PR00625 DnaJ domain signature 87 107 4.1E-8 T 13-10-2018 IPR001623 DnaJ domain BEN78_03470 173cb24d675758ee6d9e4c3d30c77469 114 SMART SM00271 44 107 1.9E-12 T 13-10-2018 IPR001623 DnaJ domain BEN78_03470 173cb24d675758ee6d9e4c3d30c77469 114 Gene3D G3DSA:1.10.287.110 42 111 7.5E-14 T 13-10-2018 IPR036869 Chaperone J-domain superfamily BEN78_13385 c8c4ad47791e4ebd7c0102b713a33329 148 SUPERFAMILY SSF46626 68 145 4.87E-16 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BEN78_13385 c8c4ad47791e4ebd7c0102b713a33329 148 PRINTS PR00607 Class IE cytochrome C signature 133 144 1.7E-9 T 13-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 BEN78_13385 c8c4ad47791e4ebd7c0102b713a33329 148 PRINTS PR00607 Class IE cytochrome C signature 75 86 1.7E-9 T 13-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 BEN78_13385 c8c4ad47791e4ebd7c0102b713a33329 148 PRINTS PR00607 Class IE cytochrome C signature 86 96 1.7E-9 T 13-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 BEN78_13385 c8c4ad47791e4ebd7c0102b713a33329 148 PRINTS PR00607 Class IE cytochrome C signature 118 130 1.7E-9 T 13-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 BEN78_13385 c8c4ad47791e4ebd7c0102b713a33329 148 Gene3D G3DSA:1.10.760.10 63 148 6.4E-31 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BEN78_13385 c8c4ad47791e4ebd7c0102b713a33329 148 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 67 143 1.4E-14 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_12010 8a42f0eaec3de6c9da72d3ae4136a6c6 429 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 207 295 6.2E-25 T 13-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BEN78_12010 8a42f0eaec3de6c9da72d3ae4136a6c6 429 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 12 184 3.4E-34 T 13-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BEN78_12010 8a42f0eaec3de6c9da72d3ae4136a6c6 429 PIRSF PIRSF000124 11 428 3.2E-57 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 BEN78_12010 8a42f0eaec3de6c9da72d3ae4136a6c6 429 Gene3D G3DSA:3.40.50.720 206 428 8.5E-59 T 13-10-2018 BEN78_12010 8a42f0eaec3de6c9da72d3ae4136a6c6 429 SUPERFAMILY SSF48179 205 297 4.93E-26 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BEN78_12010 8a42f0eaec3de6c9da72d3ae4136a6c6 429 SUPERFAMILY SSF52413 307 424 4.19E-28 T 13-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 BEN78_12010 8a42f0eaec3de6c9da72d3ae4136a6c6 429 PIRSF PIRSF500136 2 429 2.3E-150 T 13-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 BEN78_12010 8a42f0eaec3de6c9da72d3ae4136a6c6 429 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 12 416 6.9E-120 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 BEN78_12010 8a42f0eaec3de6c9da72d3ae4136a6c6 429 Gene3D G3DSA:3.40.50.720 3 203 1.2E-60 T 13-10-2018 BEN78_12010 8a42f0eaec3de6c9da72d3ae4136a6c6 429 SMART SM00984 322 422 2.1E-34 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BEN78_12010 8a42f0eaec3de6c9da72d3ae4136a6c6 429 SUPERFAMILY SSF51735 12 195 1.09E-42 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_12010 8a42f0eaec3de6c9da72d3ae4136a6c6 429 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 322 420 4.6E-21 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BEN78_10665 82f2a3070ebb445c3afba0ea3a01d211 224 TIGRFAM TIGR04123 P_estr_lig_assc: metallophosphoesterase, DNA ligase-associated 8 218 1.3E-50 T 13-10-2018 IPR026336 Metallophosphoesterase, DNA ligase-associated BEN78_10665 82f2a3070ebb445c3afba0ea3a01d211 224 Pfam PF00149 Calcineurin-like phosphoesterase 29 125 9.5E-5 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BEN78_10665 82f2a3070ebb445c3afba0ea3a01d211 224 Gene3D G3DSA:3.60.21.10 29 163 4.1E-5 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like BEN78_10665 82f2a3070ebb445c3afba0ea3a01d211 224 SUPERFAMILY SSF56300 31 171 2.42E-11 T 13-10-2018 BEN78_10665 82f2a3070ebb445c3afba0ea3a01d211 224 PIRSF PIRSF000887 8 209 1.8E-36 T 13-10-2018 IPR024173 Phosphoesterase, MJ0037 BEN78_08870 ae690856b99b1cbfc6695302026971d1 408 Pfam PF00990 Diguanylate cyclase, GGDEF domain 223 378 2.2E-38 T 13-10-2018 IPR000160 GGDEF domain BEN78_08870 ae690856b99b1cbfc6695302026971d1 408 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 221 382 3.4E-43 T 13-10-2018 IPR000160 GGDEF domain BEN78_08870 ae690856b99b1cbfc6695302026971d1 408 SMART SM00267 212 382 5.9E-49 T 13-10-2018 IPR000160 GGDEF domain BEN78_08870 ae690856b99b1cbfc6695302026971d1 408 SUPERFAMILY SSF55073 228 381 3.06E-42 T 13-10-2018 IPR029787 Nucleotide cyclase BEN78_08870 ae690856b99b1cbfc6695302026971d1 408 Gene3D G3DSA:3.30.70.270 211 380 1.2E-49 T 13-10-2018 BEN78_09850 a2799b81f2c9d45f02e05a8903604db1 683 SUPERFAMILY SSF82171 55 391 1.2E-30 T 13-10-2018 BEN78_09850 a2799b81f2c9d45f02e05a8903604db1 683 Pfam PF07676 WD40-like Beta Propeller Repeat 155 178 0.0043 T 13-10-2018 IPR011659 WD40-like Beta Propeller BEN78_09850 a2799b81f2c9d45f02e05a8903604db1 683 Pfam PF07676 WD40-like Beta Propeller Repeat 108 132 4.0E-4 T 13-10-2018 IPR011659 WD40-like Beta Propeller BEN78_09850 a2799b81f2c9d45f02e05a8903604db1 683 Gene3D G3DSA:3.40.50.1820 426 683 1.8E-72 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_09850 a2799b81f2c9d45f02e05a8903604db1 683 Gene3D G3DSA:2.120.10.30 36 198 4.7E-19 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BEN78_09850 a2799b81f2c9d45f02e05a8903604db1 683 Gene3D G3DSA:2.120.10.30 199 343 2.0E-9 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BEN78_09850 a2799b81f2c9d45f02e05a8903604db1 683 Pfam PF00326 Prolyl oligopeptidase family 483 683 5.4E-49 T 13-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 BEN78_09850 a2799b81f2c9d45f02e05a8903604db1 683 SUPERFAMILY SSF53474 430 683 1.59E-67 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_15075 f141cda7f6c15d4911fbbfababaa5e1b 143 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 33 77 1.6E-13 T 13-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 BEN78_15075 f141cda7f6c15d4911fbbfababaa5e1b 143 Gene3D G3DSA:1.20.1290.10 3 143 2.2E-43 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 BEN78_15075 f141cda7f6c15d4911fbbfababaa5e1b 143 Pfam PF02627 Carboxymuconolactone decarboxylase family 14 95 3.7E-18 T 13-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 BEN78_15075 f141cda7f6c15d4911fbbfababaa5e1b 143 SUPERFAMILY SSF69118 9 142 7.65E-41 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 BEN78_15225 ae5bd9f7e7b17fb45c5cbdc1c9868518 1757 SMART SM00487 88 298 7.9E-19 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN78_15225 ae5bd9f7e7b17fb45c5cbdc1c9868518 1757 Gene3D G3DSA:3.40.50.300 927 1083 4.2E-15 T 13-10-2018 BEN78_15225 ae5bd9f7e7b17fb45c5cbdc1c9868518 1757 Pfam PF00270 DEAD/DEAH box helicase 95 275 1.3E-22 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BEN78_15225 ae5bd9f7e7b17fb45c5cbdc1c9868518 1757 Pfam PF00271 Helicase conserved C-terminal domain 965 1042 1.4E-6 T 13-10-2018 IPR001650 Helicase, C-terminal BEN78_15225 ae5bd9f7e7b17fb45c5cbdc1c9868518 1757 Pfam PF09369 Domain of unknown function (DUF1998) 1518 1622 3.1E-12 T 13-10-2018 IPR018973 DEAD/DEAH-box helicase, putative BEN78_15225 ae5bd9f7e7b17fb45c5cbdc1c9868518 1757 SUPERFAMILY SSF52540 107 1085 3.01E-24 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_15225 ae5bd9f7e7b17fb45c5cbdc1c9868518 1757 Gene3D G3DSA:3.40.50.300 87 288 2.4E-37 T 13-10-2018 BEN78_15225 ae5bd9f7e7b17fb45c5cbdc1c9868518 1757 SMART SM00490 942 1042 1.7E-7 T 13-10-2018 IPR001650 Helicase, C-terminal BEN78_15225 ae5bd9f7e7b17fb45c5cbdc1c9868518 1757 SUPERFAMILY SSF52540 91 276 9.01E-29 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_05200 ce3f7d13a8e1222020c3abcceb7a0a7a 179 Gene3D G3DSA:2.30.110.10 18 178 1.6E-41 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 BEN78_05200 ce3f7d13a8e1222020c3abcceb7a0a7a 179 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 22 170 1.0E-43 T 13-10-2018 IPR038725 General stress protein, FMN-binding split barrel domain BEN78_05200 ce3f7d13a8e1222020c3abcceb7a0a7a 179 SUPERFAMILY SSF50475 23 150 8.61E-28 T 13-10-2018 BEN78_07840 bcc22b71a532071f6334aeec170a278d 329 SMART SM01004 3 326 2.3E-226 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BEN78_07840 bcc22b71a532071f6334aeec170a278d 329 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 122 136 8.5E-59 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BEN78_07840 bcc22b71a532071f6334aeec170a278d 329 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 191 210 8.5E-59 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BEN78_07840 bcc22b71a532071f6334aeec170a278d 329 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 300 319 8.5E-59 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BEN78_07840 bcc22b71a532071f6334aeec170a278d 329 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 270 285 8.5E-59 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BEN78_07840 bcc22b71a532071f6334aeec170a278d 329 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 153 172 8.5E-59 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BEN78_07840 bcc22b71a532071f6334aeec170a278d 329 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 245 261 8.5E-59 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BEN78_07840 bcc22b71a532071f6334aeec170a278d 329 SUPERFAMILY SSF51569 4 328 7.91E-137 T 13-10-2018 BEN78_07840 bcc22b71a532071f6334aeec170a278d 329 Pfam PF00490 Delta-aminolevulinic acid dehydratase 6 325 4.7E-136 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BEN78_07840 bcc22b71a532071f6334aeec170a278d 329 Gene3D G3DSA:3.20.20.70 1 329 3.6E-141 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_07840 bcc22b71a532071f6334aeec170a278d 329 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 245 257 - T 13-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BEN78_07840 bcc22b71a532071f6334aeec170a278d 329 PIRSF PIRSF001415 1 329 7.7E-145 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BEN78_08110 00f1782fd0e285727ff22388f1b415d9 1096 SMART SM00248 1025 1054 2.4 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 BEN78_08110 00f1782fd0e285727ff22388f1b415d9 1096 SMART SM00248 398 430 200.0 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 BEN78_08110 00f1782fd0e285727ff22388f1b415d9 1096 SMART SM00248 500 533 340.0 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 BEN78_08110 00f1782fd0e285727ff22388f1b415d9 1096 SMART SM00248 638 669 100.0 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 BEN78_08110 00f1782fd0e285727ff22388f1b415d9 1096 SMART SM00248 230 259 420.0 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 BEN78_08110 00f1782fd0e285727ff22388f1b415d9 1096 SMART SM00248 776 837 1600.0 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 BEN78_08110 00f1782fd0e285727ff22388f1b415d9 1096 SMART SM00248 710 739 350.0 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 BEN78_08110 00f1782fd0e285727ff22388f1b415d9 1096 SMART SM00248 299 331 23.0 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 BEN78_08110 00f1782fd0e285727ff22388f1b415d9 1096 SMART SM00248 981 1021 2500.0 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 BEN78_08110 00f1782fd0e285727ff22388f1b415d9 1096 SMART SM00248 368 397 0.33 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 BEN78_08110 00f1782fd0e285727ff22388f1b415d9 1096 SMART SM00248 743 772 0.0019 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 BEN78_08110 00f1782fd0e285727ff22388f1b415d9 1096 SMART SM00248 335 364 0.0064 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 BEN78_08110 00f1782fd0e285727ff22388f1b415d9 1096 SMART SM00248 874 903 14.0 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 BEN78_08110 00f1782fd0e285727ff22388f1b415d9 1096 SMART SM00248 434 463 1.5E-4 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 BEN78_08110 00f1782fd0e285727ff22388f1b415d9 1096 SMART SM00248 467 496 0.22 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 BEN78_08110 00f1782fd0e285727ff22388f1b415d9 1096 SMART SM00248 940 977 6.6 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 BEN78_08110 00f1782fd0e285727ff22388f1b415d9 1096 SMART SM00248 841 870 0.73 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 BEN78_08110 00f1782fd0e285727ff22388f1b415d9 1096 SMART SM00248 907 936 50.0 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 BEN78_08110 00f1782fd0e285727ff22388f1b415d9 1096 SMART SM00248 267 296 330.0 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 BEN78_08110 00f1782fd0e285727ff22388f1b415d9 1096 SUPERFAMILY SSF48403 617 668 2.45E-7 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily BEN78_08110 00f1782fd0e285727ff22388f1b415d9 1096 SUPERFAMILY SSF48403 714 1078 2.93E-58 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily BEN78_08110 00f1782fd0e285727ff22388f1b415d9 1096 Gene3D G3DSA:1.25.40.20 390 471 4.3E-22 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily BEN78_08110 00f1782fd0e285727ff22388f1b415d9 1096 SUPERFAMILY SSF48403 234 508 4.68E-52 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily BEN78_08110 00f1782fd0e285727ff22388f1b415d9 1096 Gene3D G3DSA:1.25.40.960 340 389 7.3E-9 T 13-10-2018 BEN78_08110 00f1782fd0e285727ff22388f1b415d9 1096 Pfam PF13637 Ankyrin repeats (many copies) 910 954 3.6E-5 T 13-10-2018 BEN78_08110 00f1782fd0e285727ff22388f1b415d9 1096 PRINTS PR01415 Ankyrin repeat signature 435 450 5.4E-5 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 BEN78_08110 00f1782fd0e285727ff22388f1b415d9 1096 PRINTS PR01415 Ankyrin repeat signature 621 635 5.4E-5 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 BEN78_08110 00f1782fd0e285727ff22388f1b415d9 1096 Gene3D G3DSA:1.25.40.20 605 800 2.8E-35 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily BEN78_08110 00f1782fd0e285727ff22388f1b415d9 1096 Gene3D G3DSA:1.25.40.20 804 1000 1.3E-35 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily BEN78_08110 00f1782fd0e285727ff22388f1b415d9 1096 Pfam PF12796 Ankyrin repeats (3 copies) 815 901 3.1E-9 T 13-10-2018 IPR020683 Ankyrin repeat-containing domain BEN78_08110 00f1782fd0e285727ff22388f1b415d9 1096 Pfam PF12796 Ankyrin repeats (3 copies) 406 496 3.2E-11 T 13-10-2018 IPR020683 Ankyrin repeat-containing domain BEN78_08110 00f1782fd0e285727ff22388f1b415d9 1096 Pfam PF12796 Ankyrin repeats (3 copies) 715 796 1.8E-8 T 13-10-2018 IPR020683 Ankyrin repeat-containing domain BEN78_08110 00f1782fd0e285727ff22388f1b415d9 1096 Pfam PF12796 Ankyrin repeats (3 copies) 279 365 1.7E-9 T 13-10-2018 IPR020683 Ankyrin repeat-containing domain BEN78_08110 00f1782fd0e285727ff22388f1b415d9 1096 Gene3D G3DSA:1.25.40.20 472 585 6.6E-15 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily BEN78_08110 00f1782fd0e285727ff22388f1b415d9 1096 Gene3D G3DSA:1.25.40.20 219 339 2.4E-20 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily BEN78_08110 00f1782fd0e285727ff22388f1b415d9 1096 Gene3D G3DSA:1.25.40.20 1001 1079 3.9E-14 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily BEN78_12345 7e92500b47e80d35fbfeac05a5b322d2 106 SUPERFAMILY SSF141091 3 101 2.09E-31 T 13-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_12345 7e92500b47e80d35fbfeac05a5b322d2 106 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 13-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_12345 7e92500b47e80d35fbfeac05a5b322d2 106 TIGRFAM TIGR00061 L21: ribosomal protein bL21 3 101 2.5E-34 T 13-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_12345 7e92500b47e80d35fbfeac05a5b322d2 106 Pfam PF00829 Ribosomal prokaryotic L21 protein 3 101 3.4E-35 T 13-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_12345 7e92500b47e80d35fbfeac05a5b322d2 106 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 2 103 24.218 T 13-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_08960 e047d543004db7a6ec587c720aba595e 303 SUPERFAMILY SSF103481 49 146 3.14E-12 T 13-10-2018 BEN78_08960 e047d543004db7a6ec587c720aba595e 303 SUPERFAMILY SSF103481 211 289 1.83E-12 T 13-10-2018 BEN78_08960 e047d543004db7a6ec587c720aba595e 303 Pfam PF00892 EamA-like transporter family 10 145 1.2E-16 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BEN78_08960 e047d543004db7a6ec587c720aba595e 303 TIGRFAM TIGR00688 rarD: protein RarD 10 263 4.8E-66 T 13-10-2018 IPR004626 RarD protein GO:0005887 BEN78_10660 610552b72488dfd0d1e44af5ca4daa88 832 Gene3D G3DSA:3.40.50.300 261 400 1.5E-20 T 13-10-2018 BEN78_10660 610552b72488dfd0d1e44af5ca4daa88 832 SMART SM00487 18 243 2.6E-23 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN78_10660 610552b72488dfd0d1e44af5ca4daa88 832 Gene3D G3DSA:3.40.50.300 13 227 1.9E-41 T 13-10-2018 BEN78_10660 610552b72488dfd0d1e44af5ca4daa88 832 SMART SM00490 292 374 1.5E-16 T 13-10-2018 IPR001650 Helicase, C-terminal BEN78_10660 610552b72488dfd0d1e44af5ca4daa88 832 Pfam PF08494 DEAD/H associated 611 798 3.7E-44 T 13-10-2018 IPR013701 DEAD/H associated GO:0005524|GO:0016818 BEN78_10660 610552b72488dfd0d1e44af5ca4daa88 832 Pfam PF00271 Helicase conserved C-terminal domain 270 370 3.2E-12 T 13-10-2018 IPR001650 Helicase, C-terminal BEN78_10660 610552b72488dfd0d1e44af5ca4daa88 832 SUPERFAMILY SSF52540 29 384 9.09E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_10660 610552b72488dfd0d1e44af5ca4daa88 832 TIGRFAM TIGR04121 DEXH_lig_assoc: DEXH box helicase, DNA ligase-associated 11 827 0.0 T 13-10-2018 IPR026362 DEXH box helicase, DNA ligase-associated BEN78_10660 610552b72488dfd0d1e44af5ca4daa88 832 Pfam PF00270 DEAD/DEAH box helicase 24 213 2.1E-21 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BEN78_10660 610552b72488dfd0d1e44af5ca4daa88 832 PIRSF PIRSF037307 8 826 1.3E-135 T 13-10-2018 IPR017170 Lhr-like ATP-dependent RNA helicase, predicted GO:0005524|GO:0016818 BEN78_07780 38dcc0c56d0f2bbb535ccece9386ec63 161 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 36 148 3.2E-17 T 13-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 BEN78_07780 38dcc0c56d0f2bbb535ccece9386ec63 161 Gene3D G3DSA:3.10.129.10 12 159 5.9E-30 T 13-10-2018 BEN78_07780 38dcc0c56d0f2bbb535ccece9386ec63 161 Pfam PF03061 Thioesterase superfamily 67 144 2.2E-13 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 BEN78_07780 38dcc0c56d0f2bbb535ccece9386ec63 161 SUPERFAMILY SSF54637 34 154 1.14E-24 T 13-10-2018 IPR029069 HotDog domain superfamily BEN78_12985 49eb042817025990c4045fc739b62839 150 Pfam PF02472 Biopolymer transport protein ExbD/TolR 8 135 3.6E-27 T 13-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 BEN78_12985 49eb042817025990c4045fc739b62839 150 Gene3D G3DSA:3.30.420.270 61 131 4.0E-6 T 13-10-2018 BEN78_12755 c3581cc5028e36831cb2898d587e4eb2 438 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 64 75 - T 13-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12755 c3581cc5028e36831cb2898d587e4eb2 438 Gene3D G3DSA:1.10.645.20 25 438 9.2E-170 T 13-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12755 c3581cc5028e36831cb2898d587e4eb2 438 SUPERFAMILY SSF56762 37 438 5.63E-135 T 13-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12755 c3581cc5028e36831cb2898d587e4eb2 438 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 22 438 48.511 T 13-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12755 c3581cc5028e36831cb2898d587e4eb2 438 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 141 438 2.1E-120 T 13-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12755 c3581cc5028e36831cb2898d587e4eb2 438 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 27 438 9.1E-180 T 13-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_04855 0e44758f7a96cf3228cd76b4a7c0fa71 300 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 60 82 - T 13-10-2018 IPR030470 UbiA prenyltransferase conserved site BEN78_04855 0e44758f7a96cf3228cd76b4a7c0fa71 300 Pfam PF01040 UbiA prenyltransferase family 22 264 1.4E-59 T 13-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 BEN78_04855 0e44758f7a96cf3228cd76b4a7c0fa71 300 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 5 290 20.048 T 13-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 BEN78_04855 0e44758f7a96cf3228cd76b4a7c0fa71 300 Gene3D G3DSA:1.10.357.140 15 165 1.6E-19 T 13-10-2018 BEN78_04855 0e44758f7a96cf3228cd76b4a7c0fa71 300 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 8 289 7.6E-94 T 13-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 BEN78_11210 5eae1e71db5417d27dc0fc9a4dc8ce7e 125 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.08 T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_11210 5eae1e71db5417d27dc0fc9a4dc8ce7e 125 Pfam PF01196 Ribosomal protein L17 20 116 1.5E-32 T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_11210 5eae1e71db5417d27dc0fc9a4dc8ce7e 125 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_11210 5eae1e71db5417d27dc0fc9a4dc8ce7e 125 TIGRFAM TIGR00059 L17: ribosomal protein bL17 8 117 2.2E-45 T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_11210 5eae1e71db5417d27dc0fc9a4dc8ce7e 125 Gene3D G3DSA:3.90.1030.10 1 117 8.4E-46 T 13-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_11210 5eae1e71db5417d27dc0fc9a4dc8ce7e 125 SUPERFAMILY SSF64263 1 119 5.76E-50 T 13-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_11060 561c928d8b8e79fb60495fca639d29b8 124 PIRSF PIRSF002133 1 124 4.5E-54 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_11060 561c928d8b8e79fb60495fca639d29b8 124 Gene3D G3DSA:2.40.50.140 1 124 1.5E-61 T 13-10-2018 BEN78_11060 561c928d8b8e79fb60495fca639d29b8 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.613 T 13-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_11060 561c928d8b8e79fb60495fca639d29b8 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 2.7E-59 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_11060 561c928d8b8e79fb60495fca639d29b8 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 2.7E-59 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_11060 561c928d8b8e79fb60495fca639d29b8 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 2.7E-59 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_11060 561c928d8b8e79fb60495fca639d29b8 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 2.7E-59 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_11060 561c928d8b8e79fb60495fca639d29b8 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 2.7E-59 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_11060 561c928d8b8e79fb60495fca639d29b8 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 2.7E-59 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_11060 561c928d8b8e79fb60495fca639d29b8 124 Pfam PF00164 Ribosomal protein S12/S23 15 123 3.6E-41 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_11060 561c928d8b8e79fb60495fca639d29b8 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_11060 561c928d8b8e79fb60495fca639d29b8 124 SUPERFAMILY SSF50249 3 123 2.31E-50 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN78_11060 561c928d8b8e79fb60495fca639d29b8 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 8.5E-68 T 13-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_14310 506f002140eb84025ab7b73bbdad23dc 263 SUPERFAMILY SSF52540 9 230 4.18E-68 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_14310 506f002140eb84025ab7b73bbdad23dc 263 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN78_14310 506f002140eb84025ab7b73bbdad23dc 263 SMART SM00382 33 213 3.7E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_14310 506f002140eb84025ab7b73bbdad23dc 263 Pfam PF00005 ABC transporter 25 163 3.1E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_14310 506f002140eb84025ab7b73bbdad23dc 263 Gene3D G3DSA:3.40.50.300 3 229 3.2E-68 T 13-10-2018 BEN78_11580 ead3f3f2762bf80eae661795e53c7686 315 SUPERFAMILY SSF50129 4 152 1.73E-32 T 13-10-2018 IPR011032 GroES-like superfamily BEN78_11580 ead3f3f2762bf80eae661795e53c7686 315 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 88 2.4E-9 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BEN78_11580 ead3f3f2762bf80eae661795e53c7686 315 Gene3D G3DSA:3.90.180.10 1 315 1.2E-60 T 13-10-2018 BEN78_11580 ead3f3f2762bf80eae661795e53c7686 315 SMART SM00829 12 312 4.2E-10 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BEN78_11580 ead3f3f2762bf80eae661795e53c7686 315 SUPERFAMILY SSF51735 119 252 1.5E-23 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_11580 ead3f3f2762bf80eae661795e53c7686 315 Pfam PF00107 Zinc-binding dehydrogenase 158 242 7.8E-12 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BEN78_07520 6b71c05dba1c566dd0ec0092cbc5325f 128 Gene3D G3DSA:1.10.10.10 2 69 2.5E-13 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_07520 6b71c05dba1c566dd0ec0092cbc5325f 128 PIRSF PIRSF019455 1 128 1.4E-25 T 13-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 BEN78_07520 6b71c05dba1c566dd0ec0092cbc5325f 128 SUPERFAMILY SSF46785 6 121 1.54E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_07520 6b71c05dba1c566dd0ec0092cbc5325f 128 Pfam PF03965 Penicillinase repressor 6 119 8.5E-26 T 13-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 BEN78_08510 6060bc97debd7097daf616c4c80a694c 347 PIRSF PIRSF000116 3 197 9.3E-42 T 13-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 BEN78_08510 6060bc97debd7097daf616c4c80a694c 347 PIRSF PIRSF000116 191 320 6.2E-13 T 13-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 BEN78_08510 6060bc97debd7097daf616c4c80a694c 347 SUPERFAMILY SSF51735 7 171 7.9E-63 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_08510 6060bc97debd7097daf616c4c80a694c 347 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 7 315 2.3E-125 T 13-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 BEN78_08510 6060bc97debd7097daf616c4c80a694c 347 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 7 165 7.0E-68 T 13-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 BEN78_08510 6060bc97debd7097daf616c4c80a694c 347 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 172 315 3.8E-62 T 13-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 BEN78_08510 6060bc97debd7097daf616c4c80a694c 347 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 1 317 42.016 T 13-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 BEN78_08510 6060bc97debd7097daf616c4c80a694c 347 Gene3D G3DSA:3.40.50.720 3 170 1.5E-68 T 13-10-2018 BEN78_08510 6060bc97debd7097daf616c4c80a694c 347 SUPERFAMILY SSF48179 172 318 2.89E-67 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BEN78_08510 6060bc97debd7097daf616c4c80a694c 347 Gene3D G3DSA:1.10.3730.40 171 323 1.4E-68 T 13-10-2018 BEN78_00805 8cd5812b0b39268fa04ea47def00b80c 283 Pfam PF01145 SPFH domain / Band 7 family 56 227 1.6E-24 T 13-10-2018 IPR001107 Band 7 domain BEN78_00805 8cd5812b0b39268fa04ea47def00b80c 283 SUPERFAMILY SSF117892 90 218 1.11E-12 T 13-10-2018 IPR036013 Band 7/SPFH domain superfamily BEN78_00805 8cd5812b0b39268fa04ea47def00b80c 283 Gene3D G3DSA:3.30.479.30 84 218 1.4E-12 T 13-10-2018 BEN78_00805 8cd5812b0b39268fa04ea47def00b80c 283 SMART SM00244 52 216 2.2E-8 T 13-10-2018 IPR001107 Band 7 domain BEN78_04120 681c6d5b4cc2d6f2b5a1b022e32d5dec 337 SUPERFAMILY SSF51197 22 325 3.02E-50 T 13-10-2018 BEN78_04120 681c6d5b4cc2d6f2b5a1b022e32d5dec 337 Gene3D G3DSA:2.60.120.650 8 263 2.4E-40 T 13-10-2018 BEN78_04120 681c6d5b4cc2d6f2b5a1b022e32d5dec 337 SMART SM00558 113 275 5.3E-4 T 13-10-2018 IPR003347 JmjC domain BEN78_04120 681c6d5b4cc2d6f2b5a1b022e32d5dec 337 Pfam PF13621 Cupin-like domain 20 259 2.1E-49 T 13-10-2018 BEN78_07185 21d6712315bd23c1f907d3e483552b43 228 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 44 215 7.0E-30 T 13-10-2018 IPR003740 Uncharacterised membrane protein YitT BEN78_12050 44b46fe8bcc70d2d4a98925f32683726 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 129 146 1.4E-26 T 13-10-2018 IPR002220 DapA-like GO:0016829 BEN78_12050 44b46fe8bcc70d2d4a98925f32683726 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 1.4E-26 T 13-10-2018 IPR002220 DapA-like GO:0016829 BEN78_12050 44b46fe8bcc70d2d4a98925f32683726 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 104 120 1.4E-26 T 13-10-2018 IPR002220 DapA-like GO:0016829 BEN78_12050 44b46fe8bcc70d2d4a98925f32683726 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 72 90 1.4E-26 T 13-10-2018 IPR002220 DapA-like GO:0016829 BEN78_12050 44b46fe8bcc70d2d4a98925f32683726 300 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 39 56 - T 13-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BEN78_12050 44b46fe8bcc70d2d4a98925f32683726 300 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 134 164 - T 13-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 BEN78_12050 44b46fe8bcc70d2d4a98925f32683726 300 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 5 284 1.4E-84 T 13-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BEN78_12050 44b46fe8bcc70d2d4a98925f32683726 300 Gene3D G3DSA:3.20.20.70 2 289 1.4E-94 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_12050 44b46fe8bcc70d2d4a98925f32683726 300 Pfam PF00701 Dihydrodipicolinate synthetase family 3 282 9.6E-81 T 13-10-2018 IPR002220 DapA-like GO:0016829 BEN78_12050 44b46fe8bcc70d2d4a98925f32683726 300 PIRSF PIRSF001365 2 300 2.5E-83 T 13-10-2018 IPR002220 DapA-like GO:0016829 BEN78_12050 44b46fe8bcc70d2d4a98925f32683726 300 SUPERFAMILY SSF51569 3 285 1.47E-87 T 13-10-2018 BEN78_12050 44b46fe8bcc70d2d4a98925f32683726 300 SMART SM01130 2 289 1.3E-109 T 13-10-2018 IPR002220 DapA-like GO:0016829 BEN78_12050 44b46fe8bcc70d2d4a98925f32683726 300 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 2 287 53.542 T 13-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BEN78_16555 116bc16477b972f2c9a6c1f7d9a83005 214 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 23 204 5.5E-40 T 13-10-2018 IPR001303 Class II aldolase/adducin N-terminal BEN78_16555 116bc16477b972f2c9a6c1f7d9a83005 214 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 23 210 1.5E-70 T 13-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 BEN78_16555 116bc16477b972f2c9a6c1f7d9a83005 214 SMART SM01007 18 206 1.8E-48 T 13-10-2018 IPR001303 Class II aldolase/adducin N-terminal BEN78_16555 116bc16477b972f2c9a6c1f7d9a83005 214 Gene3D G3DSA:3.40.225.10 10 211 3.6E-47 T 13-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily BEN78_16555 116bc16477b972f2c9a6c1f7d9a83005 214 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 214 107.212 T 13-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 BEN78_16555 116bc16477b972f2c9a6c1f7d9a83005 214 SUPERFAMILY SSF53639 14 211 7.65E-44 T 13-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily BEN78_13090 829d7d48198defbc219056aaa57189ab 523 Pfam PF00144 Beta-lactamase 32 368 7.6E-60 T 13-10-2018 IPR001466 Beta-lactamase-related BEN78_13090 829d7d48198defbc219056aaa57189ab 523 Gene3D G3DSA:3.40.710.10 29 383 5.0E-83 T 13-10-2018 BEN78_13090 829d7d48198defbc219056aaa57189ab 523 SUPERFAMILY SSF56601 29 378 3.5E-73 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BEN78_10345 5e77776a84f80a6ff4af927ae7fa7a87 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 8.6E-22 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_10345 5e77776a84f80a6ff4af927ae7fa7a87 306 Gene3D G3DSA:1.10.10.10 1 85 2.2E-32 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_10345 5e77776a84f80a6ff4af927ae7fa7a87 306 Pfam PF03466 LysR substrate binding domain 88 292 9.5E-47 T 13-10-2018 IPR005119 LysR, substrate-binding BEN78_10345 5e77776a84f80a6ff4af927ae7fa7a87 306 SUPERFAMILY SSF46785 1 110 1.33E-24 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_10345 5e77776a84f80a6ff4af927ae7fa7a87 306 SUPERFAMILY SSF53850 88 296 8.69E-42 T 13-10-2018 BEN78_10345 5e77776a84f80a6ff4af927ae7fa7a87 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.1E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_10345 5e77776a84f80a6ff4af927ae7fa7a87 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.1E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_10345 5e77776a84f80a6ff4af927ae7fa7a87 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.1E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_10345 5e77776a84f80a6ff4af927ae7fa7a87 306 Gene3D G3DSA:3.40.190.10 91 291 1.8E-68 T 13-10-2018 BEN78_10345 5e77776a84f80a6ff4af927ae7fa7a87 306 Gene3D G3DSA:3.40.190.10 161 262 1.8E-68 T 13-10-2018 BEN78_01390 fb95e1f3753c74aef92513f3c103c53d 560 Gene3D G3DSA:1.20.1250.20 266 488 2.1E-17 T 13-10-2018 BEN78_01390 fb95e1f3753c74aef92513f3c103c53d 560 SUPERFAMILY SSF103473 28 489 1.05E-46 T 13-10-2018 IPR036259 MFS transporter superfamily BEN78_01390 fb95e1f3753c74aef92513f3c103c53d 560 Pfam PF07690 Major Facilitator Superfamily 41 441 1.4E-37 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN78_01390 fb95e1f3753c74aef92513f3c103c53d 560 Gene3D G3DSA:1.20.1250.20 31 249 1.3E-14 T 13-10-2018 BEN78_12745 58dc2d6c8f36d4418b282177f0097319 192 SUPERFAMILY SSF56770 35 179 6.41E-66 T 13-10-2018 BEN78_12745 58dc2d6c8f36d4418b282177f0097319 192 Gene3D G3DSA:3.40.50.12280 22 190 1.7E-78 T 13-10-2018 BEN78_12745 58dc2d6c8f36d4418b282177f0097319 192 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 144 160 - T 13-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12745 58dc2d6c8f36d4418b282177f0097319 192 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 27 177 41.372 T 13-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12745 58dc2d6c8f36d4418b282177f0097319 192 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 63 172 1.1E-22 T 13-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12745 58dc2d6c8f36d4418b282177f0097319 192 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 37 178 1.9E-76 T 13-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_07225 ad494f29f8297e556f93ae73b32a41e3 432 Pfam PF07804 HipA-like C-terminal domain 161 342 3.4E-30 T 13-10-2018 IPR012893 HipA-like, C-terminal BEN78_07225 ad494f29f8297e556f93ae73b32a41e3 432 Pfam PF13657 HipA N-terminal domain 17 95 1.2E-5 T 13-10-2018 IPR017508 HipA, N-terminal subdomain 1 BEN78_07225 ad494f29f8297e556f93ae73b32a41e3 432 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 21 94 4.1E-7 T 13-10-2018 IPR017508 HipA, N-terminal subdomain 1 BEN78_00855 db77ad14f6a348ee828a11e5aebe9a6d 275 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 32 275 25.248 T 13-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 BEN78_00855 db77ad14f6a348ee828a11e5aebe9a6d 275 Gene3D G3DSA:2.160.20.70 167 275 8.7E-29 T 13-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 BEN78_00855 db77ad14f6a348ee828a11e5aebe9a6d 275 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 33 274 2.9E-66 T 13-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 BEN78_00855 db77ad14f6a348ee828a11e5aebe9a6d 275 SUPERFAMILY SSF63848 171 274 1.28E-28 T 13-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 BEN78_00855 db77ad14f6a348ee828a11e5aebe9a6d 275 Gene3D G3DSA:3.30.750.120 30 142 6.3E-9 T 13-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily BEN78_00855 db77ad14f6a348ee828a11e5aebe9a6d 275 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 173 271 2.3E-29 T 13-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 BEN78_00855 db77ad14f6a348ee828a11e5aebe9a6d 275 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 33 132 1.7E-18 T 13-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 BEN78_10845 6363218002c92558cf91c3d45fcdd7c6 108 Gene3D G3DSA:3.30.160.100 1 105 1.5E-29 T 13-10-2018 IPR036567 Ribosome hibernation promotion factor-like BEN78_10845 6363218002c92558cf91c3d45fcdd7c6 108 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 98 1.4E-25 T 13-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 BEN78_10845 6363218002c92558cf91c3d45fcdd7c6 108 SUPERFAMILY SSF69754 1 99 4.19E-30 T 13-10-2018 IPR036567 Ribosome hibernation promotion factor-like BEN78_10845 6363218002c92558cf91c3d45fcdd7c6 108 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 92 3.4E-23 T 13-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 BEN78_05960 062014387aa2ed737cf24106f6e27769 321 Gene3D G3DSA:2.40.70.10 29 162 5.7E-16 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily BEN78_05960 062014387aa2ed737cf24106f6e27769 321 Gene3D G3DSA:2.40.70.10 188 310 8.1E-12 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily BEN78_05960 062014387aa2ed737cf24106f6e27769 321 SUPERFAMILY SSF50630 205 299 1.01E-6 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily BEN78_05960 062014387aa2ed737cf24106f6e27769 321 Pfam PF13650 Aspartyl protease 47 143 3.2E-12 T 13-10-2018 BEN78_05960 062014387aa2ed737cf24106f6e27769 321 Pfam PF13975 gag-polyprotein putative aspartyl protease 205 298 7.3E-8 T 13-10-2018 BEN78_05960 062014387aa2ed737cf24106f6e27769 321 SUPERFAMILY SSF50630 40 153 1.13E-11 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily BEN78_09535 e4bce595981e7b36452a84ba1bf5fe35 89 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 6 87 7.8E-22 T 13-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 BEN78_09535 e4bce595981e7b36452a84ba1bf5fe35 89 Hamap MF_00910 Cell division protein FtsL [ftsL]. 4 87 15.854 T 13-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 BEN78_09535 e4bce595981e7b36452a84ba1bf5fe35 89 Pfam PF04999 Cell division protein FtsL 6 89 9.4E-24 T 13-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 BEN78_05615 d2902c083113b87218e74f881c2f8e95 291 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 13 274 55.173 T 13-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 BEN78_05615 d2902c083113b87218e74f881c2f8e95 291 PIRSF PIRSF004976 7 281 8.6E-65 T 13-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 BEN78_05615 d2902c083113b87218e74f881c2f8e95 291 Pfam PF01171 PP-loop family 44 207 3.1E-14 T 13-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 BEN78_05615 d2902c083113b87218e74f881c2f8e95 291 SUPERFAMILY SSF52402 22 238 1.15E-52 T 13-10-2018 BEN78_05615 d2902c083113b87218e74f881c2f8e95 291 Gene3D G3DSA:3.40.50.620 9 263 1.2E-44 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_01190 a85b42a2d87e0c2cde3512d9d71b1d3d 878 Gene3D G3DSA:2.170.130.10 1 137 2.2E-34 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_01190 a85b42a2d87e0c2cde3512d9d71b1d3d 878 Pfam PF00593 TonB dependent receptor 303 872 1.4E-27 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_01190 a85b42a2d87e0c2cde3512d9d71b1d3d 878 Pfam PF07715 TonB-dependent Receptor Plug Domain 17 133 1.7E-23 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_01190 a85b42a2d87e0c2cde3512d9d71b1d3d 878 SUPERFAMILY SSF56935 2 875 8.06E-77 T 13-10-2018 BEN78_07145 693aa6c6b0aa9229ec5f3e3ba72287d5 243 Gene3D G3DSA:3.40.50.2020 94 243 9.3E-14 T 13-10-2018 BEN78_07145 693aa6c6b0aa9229ec5f3e3ba72287d5 243 SUPERFAMILY SSF53271 70 242 9.96E-31 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like BEN78_04740 1d6cc1ba481daee0bf77075c292774eb 543 SUPERFAMILY SSF55073 392 541 4.32E-46 T 13-10-2018 IPR029787 Nucleotide cyclase BEN78_04740 1d6cc1ba481daee0bf77075c292774eb 543 Gene3D G3DSA:3.30.70.270 376 542 4.2E-54 T 13-10-2018 BEN78_04740 1d6cc1ba481daee0bf77075c292774eb 543 Pfam PF07695 7TM diverse intracellular signalling 167 372 1.6E-21 T 13-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 BEN78_04740 1d6cc1ba481daee0bf77075c292774eb 543 Pfam PF00990 Diguanylate cyclase, GGDEF domain 387 538 4.8E-43 T 13-10-2018 IPR000160 GGDEF domain BEN78_04740 1d6cc1ba481daee0bf77075c292774eb 543 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 386 542 1.8E-43 T 13-10-2018 IPR000160 GGDEF domain BEN78_04740 1d6cc1ba481daee0bf77075c292774eb 543 SMART SM00267 376 542 1.2E-58 T 13-10-2018 IPR000160 GGDEF domain BEN78_12620 daa2ca494669d79069e8335020be6317 167 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 12 166 1.5E-63 T 13-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 BEN78_12620 daa2ca494669d79069e8335020be6317 167 SUPERFAMILY SSF46557 13 86 5.1E-24 T 13-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 BEN78_12620 daa2ca494669d79069e8335020be6317 167 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 93 165 1.0E-25 T 13-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 BEN78_12620 daa2ca494669d79069e8335020be6317 167 Hamap MF_00930 Transcription elongation factor GreB [greB]. 10 166 50.779 T 13-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 BEN78_12620 daa2ca494669d79069e8335020be6317 167 Pfam PF03449 Transcription elongation factor, N-terminal 14 83 1.8E-24 T 13-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 BEN78_12620 daa2ca494669d79069e8335020be6317 167 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 26 57 - T 13-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 BEN78_12620 daa2ca494669d79069e8335020be6317 167 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 129 145 - T 13-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 BEN78_12620 daa2ca494669d79069e8335020be6317 167 PIRSF PIRSF006092 9 167 1.2E-49 T 13-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 BEN78_12620 daa2ca494669d79069e8335020be6317 167 SUPERFAMILY SSF54534 90 165 9.94E-22 T 13-10-2018 BEN78_12620 daa2ca494669d79069e8335020be6317 167 Gene3D G3DSA:1.10.287.180 10 85 1.4E-26 T 13-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 BEN78_12620 daa2ca494669d79069e8335020be6317 167 Gene3D G3DSA:3.10.50.30 87 167 1.7E-28 T 13-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 BEN78_12620 daa2ca494669d79069e8335020be6317 167 Hamap MF_00105 Transcription elongation factor GreA [greA]. 11 164 29.301 T 13-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 BEN78_11715 b3d92c986e0c32af723769d1cb73d150 912 Pfam PF07715 TonB-dependent Receptor Plug Domain 74 176 3.5E-15 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_11715 b3d92c986e0c32af723769d1cb73d150 912 SUPERFAMILY SSF56935 44 912 1.28E-78 T 13-10-2018 BEN78_11715 b3d92c986e0c32af723769d1cb73d150 912 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 54 912 1.1E-178 T 13-10-2018 IPR010104 Bacterial TonB-dependent receptor BEN78_11715 b3d92c986e0c32af723769d1cb73d150 912 Gene3D G3DSA:2.170.130.10 56 180 5.3E-16 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_15240 22e00b77ddbd105d0e67c0676163442d 485 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 484 81.602 T 13-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 BEN78_15240 22e00b77ddbd105d0e67c0676163442d 485 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 471 8.9E-158 T 13-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 BEN78_15240 22e00b77ddbd105d0e67c0676163442d 485 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 294 306 - T 13-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 BEN78_15240 22e00b77ddbd105d0e67c0676163442d 485 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 452 3.2E-186 T 13-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 BEN78_15240 22e00b77ddbd105d0e67c0676163442d 485 SUPERFAMILY SSF54631 94 203 8.72E-28 T 13-10-2018 BEN78_15240 22e00b77ddbd105d0e67c0676163442d 485 Gene3D G3DSA:3.20.20.70 1 484 2.5E-204 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_15240 22e00b77ddbd105d0e67c0676163442d 485 SMART SM01240 7 471 0.0 T 13-10-2018 BEN78_15240 22e00b77ddbd105d0e67c0676163442d 485 PIRSF PIRSF000130 1 485 3.9E-199 T 13-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 BEN78_15240 22e00b77ddbd105d0e67c0676163442d 485 Pfam PF00571 CBS domain 148 203 1.4E-4 T 13-10-2018 IPR000644 CBS domain BEN78_15240 22e00b77ddbd105d0e67c0676163442d 485 Pfam PF00571 CBS domain 95 138 1.5E-10 T 13-10-2018 IPR000644 CBS domain BEN78_15240 22e00b77ddbd105d0e67c0676163442d 485 SMART SM00116 96 143 4.5E-12 T 13-10-2018 IPR000644 CBS domain BEN78_15240 22e00b77ddbd105d0e67c0676163442d 485 SMART SM00116 157 205 1.1E-4 T 13-10-2018 IPR000644 CBS domain BEN78_15240 22e00b77ddbd105d0e67c0676163442d 485 SUPERFAMILY SSF51412 2 475 3.66E-123 T 13-10-2018 BEN78_07045 ece07b8bdae9613418d17d5c96563d94 210 PIRSF PIRSF010372 6 210 1.2E-31 T 13-10-2018 IPR007396 Transcriptional regulator PAI 2-type BEN78_07045 ece07b8bdae9613418d17d5c96563d94 210 SUPERFAMILY SSF50475 16 190 6.28E-19 T 13-10-2018 BEN78_07045 ece07b8bdae9613418d17d5c96563d94 210 Pfam PF04299 Putative FMN-binding domain 9 161 6.5E-27 T 13-10-2018 IPR007396 Transcriptional regulator PAI 2-type BEN78_07045 ece07b8bdae9613418d17d5c96563d94 210 Gene3D G3DSA:2.30.110.10 6 203 2.9E-36 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 BEN78_14610 8caa05af272d795d385c78df2f2697af 372 Pfam PF02119 Flagellar P-ring protein 27 371 5.3E-134 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BEN78_14610 8caa05af272d795d385c78df2f2697af 372 Hamap MF_00416 Flagellar P-ring protein [flgI]. 7 372 37.752 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BEN78_14610 8caa05af272d795d385c78df2f2697af 372 PRINTS PR01010 Flagellar P-ring protein signature 110 127 7.2E-71 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BEN78_14610 8caa05af272d795d385c78df2f2697af 372 PRINTS PR01010 Flagellar P-ring protein signature 27 42 7.2E-71 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BEN78_14610 8caa05af272d795d385c78df2f2697af 372 PRINTS PR01010 Flagellar P-ring protein signature 42 57 7.2E-71 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BEN78_14610 8caa05af272d795d385c78df2f2697af 372 PRINTS PR01010 Flagellar P-ring protein signature 259 271 7.2E-71 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BEN78_14610 8caa05af272d795d385c78df2f2697af 372 PRINTS PR01010 Flagellar P-ring protein signature 168 186 7.2E-71 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BEN78_14610 8caa05af272d795d385c78df2f2697af 372 PRINTS PR01010 Flagellar P-ring protein signature 127 145 7.2E-71 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BEN78_14610 8caa05af272d795d385c78df2f2697af 372 PRINTS PR01010 Flagellar P-ring protein signature 62 77 7.2E-71 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BEN78_14610 8caa05af272d795d385c78df2f2697af 372 PRINTS PR01010 Flagellar P-ring protein signature 88 107 7.2E-71 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BEN78_09960 26778d720fc18b1fdae274aa25aa6d06 330 Gene3D G3DSA:3.40.50.300 5 212 2.2E-49 T 13-10-2018 BEN78_09960 26778d720fc18b1fdae274aa25aa6d06 330 SMART SM00382 42 183 0.0054 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_09960 26778d720fc18b1fdae274aa25aa6d06 330 Gene3D G3DSA:1.10.8.300 213 327 6.7E-33 T 13-10-2018 BEN78_09960 26778d720fc18b1fdae274aa25aa6d06 330 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 45 175 9.8E-63 T 13-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 BEN78_09960 26778d720fc18b1fdae274aa25aa6d06 330 PIRSF PIRSF002849 1 330 4.6E-124 T 13-10-2018 BEN78_09960 26778d720fc18b1fdae274aa25aa6d06 330 SUPERFAMILY SSF52540 13 302 7.44E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_07475 9ce2892ead6804f94ed0b24b173f94df 295 PIRSF PIRSF000103 1 295 1.5E-83 T 13-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 BEN78_07475 9ce2892ead6804f94ed0b24b173f94df 295 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 13-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 BEN78_07475 9ce2892ead6804f94ed0b24b173f94df 295 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 292 2.2E-120 T 13-10-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 BEN78_07475 9ce2892ead6804f94ed0b24b173f94df 295 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 162 6.3E-53 T 13-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 BEN78_07475 9ce2892ead6804f94ed0b24b173f94df 295 Gene3D G3DSA:1.10.1040.10 165 295 1.5E-42 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BEN78_07475 9ce2892ead6804f94ed0b24b173f94df 295 Gene3D G3DSA:3.40.50.720 1 164 1.6E-59 T 13-10-2018 BEN78_07475 9ce2892ead6804f94ed0b24b173f94df 295 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 292 1.4E-31 T 13-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 BEN78_07475 9ce2892ead6804f94ed0b24b173f94df 295 SUPERFAMILY SSF51735 1 162 3.0E-48 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_07475 9ce2892ead6804f94ed0b24b173f94df 295 SUPERFAMILY SSF48179 163 294 3.29E-38 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BEN78_06565 42915bb16a5c14cc7102b4afa1259452 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 4.4E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06565 42915bb16a5c14cc7102b4afa1259452 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 4.4E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06565 42915bb16a5c14cc7102b4afa1259452 254 SUPERFAMILY SSF51735 6 251 2.38E-77 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_06565 42915bb16a5c14cc7102b4afa1259452 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 250 2.7E-66 T 13-10-2018 BEN78_06565 42915bb16a5c14cc7102b4afa1259452 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 3.2E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06565 42915bb16a5c14cc7102b4afa1259452 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 3.2E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06565 42915bb16a5c14cc7102b4afa1259452 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 3.2E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06565 42915bb16a5c14cc7102b4afa1259452 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 3.2E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06565 42915bb16a5c14cc7102b4afa1259452 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.2E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06565 42915bb16a5c14cc7102b4afa1259452 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.2E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06565 42915bb16a5c14cc7102b4afa1259452 254 Gene3D G3DSA:3.40.50.720 1 253 3.6E-77 T 13-10-2018 BEN78_12100 832c721aee81bc883dc9719bc07d0936 366 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 20 329 49.796 T 13-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 BEN78_12100 832c721aee81bc883dc9719bc07d0936 366 Pfam PF13484 4Fe-4S double cluster binding domain 206 270 8.5E-21 T 13-10-2018 BEN78_12100 832c721aee81bc883dc9719bc07d0936 366 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 207 218 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BEN78_12100 832c721aee81bc883dc9719bc07d0936 366 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 27 363 2.9E-146 T 13-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 BEN78_12100 832c721aee81bc883dc9719bc07d0936 366 Pfam PF08331 Domain of unknown function (DUF1730) 75 154 2.7E-22 T 13-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 BEN78_12100 832c721aee81bc883dc9719bc07d0936 366 SUPERFAMILY SSF54862 184 332 1.88E-18 T 13-10-2018 BEN78_08195 7ad3a33795c16435ca7dd6b44bfe9e0c 689 Pfam PF00122 E1-E2 ATPase 123 288 4.9E-31 T 13-10-2018 BEN78_08195 7ad3a33795c16435ca7dd6b44bfe9e0c 689 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 313 319 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 BEN78_08195 7ad3a33795c16435ca7dd6b44bfe9e0c 689 SUPERFAMILY SSF56784 299 566 6.87E-38 T 13-10-2018 IPR036412 HAD-like superfamily BEN78_08195 7ad3a33795c16435ca7dd6b44bfe9e0c 689 Pfam PF00702 haloacid dehalogenase-like hydrolase 307 537 3.1E-35 T 13-10-2018 BEN78_08195 7ad3a33795c16435ca7dd6b44bfe9e0c 689 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 18 687 38.971 T 13-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 BEN78_08195 7ad3a33795c16435ca7dd6b44bfe9e0c 689 SUPERFAMILY SSF81665 39 305 3.14E-8 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 BEN78_08195 7ad3a33795c16435ca7dd6b44bfe9e0c 689 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 17 683 3.9E-279 T 13-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 BEN78_08195 7ad3a33795c16435ca7dd6b44bfe9e0c 689 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 470 480 1.8E-22 T 13-10-2018 BEN78_08195 7ad3a33795c16435ca7dd6b44bfe9e0c 689 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 311 325 1.8E-22 T 13-10-2018 BEN78_08195 7ad3a33795c16435ca7dd6b44bfe9e0c 689 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 160 174 1.8E-22 T 13-10-2018 BEN78_08195 7ad3a33795c16435ca7dd6b44bfe9e0c 689 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 546 558 1.8E-22 T 13-10-2018 BEN78_08195 7ad3a33795c16435ca7dd6b44bfe9e0c 689 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 523 542 1.8E-22 T 13-10-2018 BEN78_08195 7ad3a33795c16435ca7dd6b44bfe9e0c 689 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 79 337 2.5E-30 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BEN78_08195 7ad3a33795c16435ca7dd6b44bfe9e0c 689 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 377 607 2.3E-40 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BEN78_08195 7ad3a33795c16435ca7dd6b44bfe9e0c 689 SUPERFAMILY SSF81653 121 213 3.66E-19 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 BEN78_08195 7ad3a33795c16435ca7dd6b44bfe9e0c 689 Gene3D G3DSA:2.70.150.20 111 218 1.1E-23 T 13-10-2018 BEN78_08195 7ad3a33795c16435ca7dd6b44bfe9e0c 689 Gene3D G3DSA:3.40.1110.10 322 454 4.2E-41 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 BEN78_14460 fc10834c656c111215dbdb685c70085d 513 Pfam PF00448 SRP54-type protein, GTPase domain 296 483 2.2E-36 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BEN78_14460 fc10834c656c111215dbdb685c70085d 513 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 382 1.8E-75 T 13-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 BEN78_14460 fc10834c656c111215dbdb685c70085d 513 SUPERFAMILY SSF52540 292 480 6.07E-31 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_14460 fc10834c656c111215dbdb685c70085d 513 Gene3D G3DSA:3.40.50.300 291 473 2.4E-52 T 13-10-2018 BEN78_14460 fc10834c656c111215dbdb685c70085d 513 SMART SM00962 294 485 8.3E-48 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BEN78_14460 fc10834c656c111215dbdb685c70085d 513 SMART SM00382 293 490 6.4E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_15370 cd568b5550f4f4dc64a8f2374d85d318 78 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 6 73 6.3E-27 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor BEN78_15370 cd568b5550f4f4dc64a8f2374d85d318 78 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 2 70 23.649 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor BEN78_15370 cd568b5550f4f4dc64a8f2374d85d318 78 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 17 69 9.0E-18 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor BEN78_15370 cd568b5550f4f4dc64a8f2374d85d318 78 Pfam PF01809 Haemolytic domain 4 69 1.7E-28 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor BEN78_15370 cd568b5550f4f4dc64a8f2374d85d318 78 SMART SM01234 2 69 1.1E-40 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor BEN78_06420 08175e0e7c482d5a23d67164862f7498 811 SMART SM00433 46 804 2.6E-261 T 13-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BEN78_06420 08175e0e7c482d5a23d67164862f7498 811 PRINTS PR00418 DNA topoisomerase II family signature 536 548 8.0E-71 T 13-10-2018 BEN78_06420 08175e0e7c482d5a23d67164862f7498 811 PRINTS PR00418 DNA topoisomerase II family signature 743 759 8.0E-71 T 13-10-2018 BEN78_06420 08175e0e7c482d5a23d67164862f7498 811 PRINTS PR00418 DNA topoisomerase II family signature 81 94 8.0E-71 T 13-10-2018 BEN78_06420 08175e0e7c482d5a23d67164862f7498 811 PRINTS PR00418 DNA topoisomerase II family signature 431 445 8.0E-71 T 13-10-2018 BEN78_06420 08175e0e7c482d5a23d67164862f7498 811 PRINTS PR00418 DNA topoisomerase II family signature 516 533 8.0E-71 T 13-10-2018 BEN78_06420 08175e0e7c482d5a23d67164862f7498 811 PRINTS PR00418 DNA topoisomerase II family signature 124 138 8.0E-71 T 13-10-2018 BEN78_06420 08175e0e7c482d5a23d67164862f7498 811 PRINTS PR00418 DNA topoisomerase II family signature 46 61 8.0E-71 T 13-10-2018 BEN78_06420 08175e0e7c482d5a23d67164862f7498 811 PRINTS PR00418 DNA topoisomerase II family signature 498 514 8.0E-71 T 13-10-2018 BEN78_06420 08175e0e7c482d5a23d67164862f7498 811 PRINTS PR00418 DNA topoisomerase II family signature 279 292 8.0E-71 T 13-10-2018 BEN78_06420 08175e0e7c482d5a23d67164862f7498 811 ProSitePatterns PS00177 DNA topoisomerase II signature. 433 441 - T 13-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BEN78_06420 08175e0e7c482d5a23d67164862f7498 811 SUPERFAMILY SSF55874 16 221 2.62E-70 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_06420 08175e0e7c482d5a23d67164862f7498 811 PRINTS PR01159 DNA gyrase subunit B signature 206 219 4.8E-72 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BEN78_06420 08175e0e7c482d5a23d67164862f7498 811 PRINTS PR01159 DNA gyrase subunit B signature 323 339 4.8E-72 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BEN78_06420 08175e0e7c482d5a23d67164862f7498 811 PRINTS PR01159 DNA gyrase subunit B signature 231 253 4.8E-72 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BEN78_06420 08175e0e7c482d5a23d67164862f7498 811 PRINTS PR01159 DNA gyrase subunit B signature 385 405 4.8E-72 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BEN78_06420 08175e0e7c482d5a23d67164862f7498 811 PRINTS PR01159 DNA gyrase subunit B signature 16 26 4.8E-72 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BEN78_06420 08175e0e7c482d5a23d67164862f7498 811 PRINTS PR01159 DNA gyrase subunit B signature 371 385 4.8E-72 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BEN78_06420 08175e0e7c482d5a23d67164862f7498 811 PRINTS PR01159 DNA gyrase subunit B signature 481 490 4.8E-72 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BEN78_06420 08175e0e7c482d5a23d67164862f7498 811 PRINTS PR01159 DNA gyrase subunit B signature 191 206 4.8E-72 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BEN78_06420 08175e0e7c482d5a23d67164862f7498 811 PRINTS PR01159 DNA gyrase subunit B signature 764 776 4.8E-72 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BEN78_06420 08175e0e7c482d5a23d67164862f7498 811 PRINTS PR01159 DNA gyrase subunit B signature 780 796 4.8E-72 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BEN78_06420 08175e0e7c482d5a23d67164862f7498 811 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 16 811 6.1E-298 T 13-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BEN78_06420 08175e0e7c482d5a23d67164862f7498 811 Pfam PF00204 DNA gyrase B 232 401 3.8E-59 T 13-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BEN78_06420 08175e0e7c482d5a23d67164862f7498 811 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 739 799 3.3E-29 T 13-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 BEN78_06420 08175e0e7c482d5a23d67164862f7498 811 Gene3D G3DSA:3.40.50.670 712 810 1.7E-24 T 13-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BEN78_06420 08175e0e7c482d5a23d67164862f7498 811 Gene3D G3DSA:3.30.565.10 12 231 1.6E-89 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_06420 08175e0e7c482d5a23d67164862f7498 811 Gene3D G3DSA:3.30.230.10 232 403 8.3E-73 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BEN78_06420 08175e0e7c482d5a23d67164862f7498 811 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 43 182 1.1E-23 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_06420 08175e0e7c482d5a23d67164862f7498 811 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 13 811 98.795 T 13-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BEN78_06420 08175e0e7c482d5a23d67164862f7498 811 SUPERFAMILY SSF56719 405 802 5.23E-84 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 BEN78_06420 08175e0e7c482d5a23d67164862f7498 811 Pfam PF01751 Toprim domain 430 540 1.1E-17 T 13-10-2018 IPR006171 TOPRIM domain BEN78_06420 08175e0e7c482d5a23d67164862f7498 811 SUPERFAMILY SSF54211 232 402 7.97E-57 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BEN78_06420 08175e0e7c482d5a23d67164862f7498 811 Gene3D G3DSA:3.40.50.670 409 578 3.3E-72 T 13-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BEN78_06420 08175e0e7c482d5a23d67164862f7498 811 SMART SM00387 42 186 8.9E-30 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_04360 222c3f4cf1adf0d23c69d7573dfe0601 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 3.2E-13 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN78_04360 222c3f4cf1adf0d23c69d7573dfe0601 230 SMART SM00862 146 220 4.9E-11 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN78_04360 222c3f4cf1adf0d23c69d7573dfe0601 230 Pfam PF00072 Response regulator receiver domain 4 112 9.3E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_04360 222c3f4cf1adf0d23c69d7573dfe0601 230 Gene3D G3DSA:3.40.50.2300 1 125 4.1E-32 T 13-10-2018 BEN78_04360 222c3f4cf1adf0d23c69d7573dfe0601 230 Gene3D G3DSA:1.10.10.10 126 228 7.4E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_04360 222c3f4cf1adf0d23c69d7573dfe0601 230 SMART SM00448 1 112 8.3E-34 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_04360 222c3f4cf1adf0d23c69d7573dfe0601 230 SUPERFAMILY SSF52172 1 129 1.71E-36 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_04360 222c3f4cf1adf0d23c69d7573dfe0601 230 SUPERFAMILY SSF46894 123 222 4.54E-19 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BEN78_11065 309d6f0ccd13fa9aa7ee6aebdfbc595d 155 PIRSF PIRSF002122 2 155 4.5E-60 T 13-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 BEN78_11065 309d6f0ccd13fa9aa7ee6aebdfbc595d 155 Gene3D G3DSA:1.10.455.10 2 154 2.5E-57 T 13-10-2018 IPR036823 Ribosomal protein S7 domain superfamily BEN78_11065 309d6f0ccd13fa9aa7ee6aebdfbc595d 155 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 13-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11065 309d6f0ccd13fa9aa7ee6aebdfbc595d 155 SUPERFAMILY SSF47973 1 148 2.22E-56 T 13-10-2018 IPR036823 Ribosomal protein S7 domain superfamily BEN78_11065 309d6f0ccd13fa9aa7ee6aebdfbc595d 155 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 7.2E-64 T 13-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 BEN78_11065 309d6f0ccd13fa9aa7ee6aebdfbc595d 155 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 155 35.334 T 13-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 BEN78_11065 309d6f0ccd13fa9aa7ee6aebdfbc595d 155 Pfam PF00177 Ribosomal protein S7p/S5e 1 148 1.1E-63 T 13-10-2018 IPR023798 Ribosomal protein S7 domain BEN78_15445 9828be617dc4c91d0a1a236c94bc3b63 302 Gene3D G3DSA:3.40.50.620 12 265 9.4E-92 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_15445 9828be617dc4c91d0a1a236c94bc3b63 302 Gene3D G3DSA:3.40.50.620 85 222 9.4E-92 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_15445 9828be617dc4c91d0a1a236c94bc3b63 302 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 133 235 4.9E-20 T 13-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 BEN78_15445 9828be617dc4c91d0a1a236c94bc3b63 302 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 13 118 1.5E-27 T 13-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 BEN78_15445 9828be617dc4c91d0a1a236c94bc3b63 302 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 11 264 3.7E-104 T 13-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 BEN78_15445 9828be617dc4c91d0a1a236c94bc3b63 302 PRINTS PR00987 Glutamyl-tRNA synthetase signature 174 184 5.1E-13 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BEN78_15445 9828be617dc4c91d0a1a236c94bc3b63 302 PRINTS PR00987 Glutamyl-tRNA synthetase signature 13 25 5.1E-13 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BEN78_15445 9828be617dc4c91d0a1a236c94bc3b63 302 PRINTS PR00987 Glutamyl-tRNA synthetase signature 190 198 5.1E-13 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BEN78_15445 9828be617dc4c91d0a1a236c94bc3b63 302 PRINTS PR00987 Glutamyl-tRNA synthetase signature 42 55 5.1E-13 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BEN78_15445 9828be617dc4c91d0a1a236c94bc3b63 302 PRINTS PR00987 Glutamyl-tRNA synthetase signature 27 38 5.1E-13 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BEN78_15445 9828be617dc4c91d0a1a236c94bc3b63 302 SUPERFAMILY SSF52374 11 283 9.01E-81 T 13-10-2018 BEN78_15445 9828be617dc4c91d0a1a236c94bc3b63 302 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 10 291 39.947 T 13-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 BEN78_13325 108f747c869361a768acdeb112b33382 299 Hamap MF_01805 Segregation and condensation protein A [scpA]. 44 274 21.673 T 13-10-2018 IPR003768 Segregation and condensation protein A BEN78_13325 108f747c869361a768acdeb112b33382 299 Pfam PF02616 Segregation and condensation protein ScpA 61 271 3.2E-28 T 13-10-2018 IPR003768 Segregation and condensation protein A BEN78_14810 a188eb44ecd1f5627a491388e1a8ef21 556 Gene3D G3DSA:3.40.50.720 307 555 6.7E-28 T 13-10-2018 BEN78_14810 a188eb44ecd1f5627a491388e1a8ef21 556 Pfam PF00899 ThiF family 319 524 1.2E-16 T 13-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 BEN78_14810 a188eb44ecd1f5627a491388e1a8ef21 556 Pfam PF14461 Prokaryotic E2 family B 32 135 2.5E-12 T 13-10-2018 IPR032701 Prokaryotic E2 family B BEN78_14810 a188eb44ecd1f5627a491388e1a8ef21 556 SUPERFAMILY SSF69572 320 555 1.44E-20 T 13-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 BEN78_00440 36324f0b25c7c7b74e82ca44daa1c66b 459 Pfam PF06123 Inner membrane protein CreD 3 442 1.4E-137 T 13-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD BEN78_00440 36324f0b25c7c7b74e82ca44daa1c66b 459 PIRSF PIRSF004548 1 452 7.1E-131 T 13-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD BEN78_02430 b1235b49a7122d7ab4ccafb2ea33c015 306 Gene3D G3DSA:3.30.1490.20 115 180 6.0E-17 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BEN78_02430 b1235b49a7122d7ab4ccafb2ea33c015 306 Gene3D G3DSA:3.40.50.20 1 114 2.0E-33 T 13-10-2018 BEN78_02430 b1235b49a7122d7ab4ccafb2ea33c015 306 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 49.415 T 13-10-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK BEN78_02430 b1235b49a7122d7ab4ccafb2ea33c015 306 Pfam PF08443 RimK-like ATP-grasp domain 97 285 5.5E-56 T 13-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 BEN78_02430 b1235b49a7122d7ab4ccafb2ea33c015 306 SUPERFAMILY SSF56059 98 288 5.39E-44 T 13-10-2018 BEN78_02430 b1235b49a7122d7ab4ccafb2ea33c015 306 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 285 1.1E-71 T 13-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 BEN78_02430 b1235b49a7122d7ab4ccafb2ea33c015 306 Gene3D G3DSA:3.30.470.80 182 292 3.5E-40 T 13-10-2018 BEN78_05015 80215a1e9bda763ef4661f5524ca2a23 401 TIGRFAM TIGR04181 NHT_00031: aminotransferase, LLPSF_NHT_00031 family 35 392 1.1E-163 T 13-10-2018 IPR026385 Aminotransferase, LLPSF_NHT_00031 family BEN78_05015 80215a1e9bda763ef4661f5524ca2a23 401 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 45 392 5.8E-88 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BEN78_05015 80215a1e9bda763ef4661f5524ca2a23 401 Gene3D G3DSA:3.40.640.10 27 291 5.3E-92 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN78_05015 80215a1e9bda763ef4661f5524ca2a23 401 PIRSF PIRSF000390 32 393 8.4E-91 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BEN78_05015 80215a1e9bda763ef4661f5524ca2a23 401 Gene3D G3DSA:3.90.1150.10 293 394 3.2E-15 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN78_05015 80215a1e9bda763ef4661f5524ca2a23 401 SUPERFAMILY SSF53383 33 393 5.91E-99 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_04760 ed248f83b273a7fe5400cbd41d97c016 318 Gene3D G3DSA:3.40.50.720 1 316 1.5E-47 T 13-10-2018 BEN78_04760 ed248f83b273a7fe5400cbd41d97c016 318 SUPERFAMILY SSF51735 1 315 1.13E-45 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_04760 ed248f83b273a7fe5400cbd41d97c016 318 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 176 3.0E-20 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 BEN78_04035 cb978198b315a21f59c225c72b76200f 141 Gene3D G3DSA:3.40.50.1010 1 136 2.2E-21 T 13-10-2018 BEN78_04035 cb978198b315a21f59c225c72b76200f 141 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 129 9.873 T 13-10-2018 IPR022907 VapC family GO:0004540 BEN78_04035 cb978198b315a21f59c225c72b76200f 141 Pfam PF01850 PIN domain 2 120 4.3E-5 T 13-10-2018 IPR002716 PIN domain BEN78_04035 cb978198b315a21f59c225c72b76200f 141 SUPERFAMILY SSF88723 1 134 2.32E-21 T 13-10-2018 IPR029060 PIN-like domain superfamily BEN78_01200 fdd1207b29c8eb8ff0238dd526c7a94c 1120 Gene3D G3DSA:2.70.98.10 218 554 1.2E-242 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 BEN78_01200 fdd1207b29c8eb8ff0238dd526c7a94c 1120 Gene3D G3DSA:1.20.1610.10 649 830 1.2E-242 T 13-10-2018 BEN78_01200 fdd1207b29c8eb8ff0238dd526c7a94c 1120 Gene3D G3DSA:1.20.1050.60 555 648 1.2E-242 T 13-10-2018 BEN78_01200 fdd1207b29c8eb8ff0238dd526c7a94c 1120 SUPERFAMILY SSF48208 459 942 5.78E-13 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BEN78_01200 fdd1207b29c8eb8ff0238dd526c7a94c 1120 Gene3D G3DSA:3.30.2080.10 483 960 1.2E-242 T 13-10-2018 BEN78_01200 fdd1207b29c8eb8ff0238dd526c7a94c 1120 Pfam PF07971 Glycosyl hydrolase family 92 423 957 4.6E-145 T 13-10-2018 IPR012939 Glycosyl hydrolase family 92 BEN78_01200 fdd1207b29c8eb8ff0238dd526c7a94c 1120 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 207 959 2.6E-135 T 13-10-2018 IPR005887 Alpha-1,2-mannosidase, putative BEN78_03275 9d972fa1b6f848a7225633a72cd45dcf 244 Pfam PF01144 Coenzyme A transferase 18 227 2.7E-80 T 13-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 BEN78_03275 9d972fa1b6f848a7225633a72cd45dcf 244 SUPERFAMILY SSF100950 19 238 6.58E-89 T 13-10-2018 IPR037171 NagB/RpiA transferase-like BEN78_03275 9d972fa1b6f848a7225633a72cd45dcf 244 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 28 43 - T 13-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 BEN78_03275 9d972fa1b6f848a7225633a72cd45dcf 244 SMART SM00882 15 227 1.5E-93 T 13-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 BEN78_03275 9d972fa1b6f848a7225633a72cd45dcf 244 Gene3D G3DSA:3.40.1080.10 9 237 9.1E-97 T 13-10-2018 BEN78_03275 9d972fa1b6f848a7225633a72cd45dcf 244 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 13 226 6.0E-80 T 13-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 BEN78_08995 4dd734bae118a88e24a476ee6a804e49 311 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN78_08995 4dd734bae118a88e24a476ee6a804e49 311 SUPERFAMILY SSF52540 7 236 2.3E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_08995 4dd734bae118a88e24a476ee6a804e49 311 Gene3D G3DSA:3.40.50.300 12 241 5.8E-58 T 13-10-2018 BEN78_08995 4dd734bae118a88e24a476ee6a804e49 311 SMART SM00382 41 217 6.5E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_08995 4dd734bae118a88e24a476ee6a804e49 311 Pfam PF00005 ABC transporter 32 168 1.9E-25 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_11935 67e89fbf2337b41bf6242b075eb354f1 436 Pfam PF00675 Insulinase (Peptidase family M16) 78 196 7.0E-14 T 13-10-2018 IPR011765 Peptidase M16, N-terminal BEN78_11935 67e89fbf2337b41bf6242b075eb354f1 436 SUPERFAMILY SSF63411 285 408 3.0E-23 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BEN78_11935 67e89fbf2337b41bf6242b075eb354f1 436 Pfam PF05193 Peptidase M16 inactive domain 222 394 1.8E-22 T 13-10-2018 IPR007863 Peptidase M16, C-terminal BEN78_11935 67e89fbf2337b41bf6242b075eb354f1 436 Gene3D G3DSA:3.30.830.10 273 423 3.3E-31 T 13-10-2018 BEN78_11935 67e89fbf2337b41bf6242b075eb354f1 436 Gene3D G3DSA:3.30.830.10 58 264 1.8E-42 T 13-10-2018 BEN78_11935 67e89fbf2337b41bf6242b075eb354f1 436 SUPERFAMILY SSF63411 53 270 8.8E-43 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BEN78_08900 e9113b35d5457de60ae844385401800a 159 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 6 150 4.1E-28 T 13-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 BEN78_08900 e9113b35d5457de60ae844385401800a 159 Pfam PF04093 rod shape-determining protein MreD 3 151 8.2E-26 T 13-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 BEN78_08900 e9113b35d5457de60ae844385401800a 159 PIRSF PIRSF018472 1 159 6.6E-43 T 13-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type BEN78_11450 dae58ff680e14205d2826d48adee3bcd 415 Pfam PF01979 Amidohydrolase family 18 307 3.2E-27 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BEN78_11450 dae58ff680e14205d2826d48adee3bcd 415 Gene3D G3DSA:3.20.20.140 21 405 2.8E-158 T 13-10-2018 BEN78_11450 dae58ff680e14205d2826d48adee3bcd 415 Gene3D G3DSA:2.30.40.10 12 393 2.8E-158 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BEN78_11450 dae58ff680e14205d2826d48adee3bcd 415 TIGRFAM TIGR02022 hutF: formiminoglutamate deiminase 13 414 1.5E-158 T 13-10-2018 IPR010252 Formiminoglutamate deiminase BEN78_11450 dae58ff680e14205d2826d48adee3bcd 415 SUPERFAMILY SSF51556 19 318 1.32E-74 T 13-10-2018 IPR032466 Metal-dependent hydrolase BEN78_04500 0b7fd7aac2a16b1dd85b3134cd087b97 661 SUPERFAMILY SSF82171 7 378 3.66E-21 T 13-10-2018 BEN78_04500 0b7fd7aac2a16b1dd85b3134cd087b97 661 Gene3D G3DSA:3.40.50.1820 378 633 1.3E-24 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_04500 0b7fd7aac2a16b1dd85b3134cd087b97 661 SUPERFAMILY SSF53474 390 625 4.56E-20 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_04500 0b7fd7aac2a16b1dd85b3134cd087b97 661 Gene3D G3DSA:2.120.10.30 5 144 9.2E-16 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BEN78_02360 0d7936a4e4af60e512c2d49a56083b29 244 Gene3D G3DSA:3.60.20.10 2 239 1.0E-18 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BEN78_02360 0d7936a4e4af60e512c2d49a56083b29 244 PIRSF PIRSF009120 1 244 3.9E-95 T 13-10-2018 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 BEN78_02360 0d7936a4e4af60e512c2d49a56083b29 244 SUPERFAMILY SSF56235 2 242 5.6E-27 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BEN78_04085 4b0fd1246a463b397d83e47e7f871896 173 Pfam PF00213 ATP synthase delta (OSCP) subunit 5 171 7.1E-45 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_04085 4b0fd1246a463b397d83e47e7f871896 173 Hamap MF_01416 ATP synthase subunit delta [atpD]. 1 173 18.403 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_04085 4b0fd1246a463b397d83e47e7f871896 173 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 5 171 3.6E-35 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_04085 4b0fd1246a463b397d83e47e7f871896 173 Gene3D G3DSA:1.10.520.20 2 102 1.2E-23 T 13-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_04085 4b0fd1246a463b397d83e47e7f871896 173 PRINTS PR00125 ATP synthase delta subunit signature 5 24 4.9E-23 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_04085 4b0fd1246a463b397d83e47e7f871896 173 PRINTS PR00125 ATP synthase delta subunit signature 70 81 4.9E-23 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_04085 4b0fd1246a463b397d83e47e7f871896 173 PRINTS PR00125 ATP synthase delta subunit signature 146 164 4.9E-23 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_04085 4b0fd1246a463b397d83e47e7f871896 173 PRINTS PR00125 ATP synthase delta subunit signature 131 146 4.9E-23 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_04085 4b0fd1246a463b397d83e47e7f871896 173 PRINTS PR00125 ATP synthase delta subunit signature 81 95 4.9E-23 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_04085 4b0fd1246a463b397d83e47e7f871896 173 SUPERFAMILY SSF47928 2 101 1.27E-19 T 13-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_07785 f9331258be31a0d95d32d539d2c8f3d3 446 Gene3D G3DSA:3.90.1150.10 111 437 6.9E-64 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN78_07785 f9331258be31a0d95d32d539d2c8f3d3 446 SMART SM00345 9 68 4.3E-14 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN78_07785 f9331258be31a0d95d32d539d2c8f3d3 446 Gene3D G3DSA:1.10.10.10 7 79 8.8E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_07785 f9331258be31a0d95d32d539d2c8f3d3 446 Pfam PF00155 Aminotransferase class I and II 129 437 1.9E-28 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BEN78_07785 f9331258be31a0d95d32d539d2c8f3d3 446 SUPERFAMILY SSF46785 6 72 1.75E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_07785 f9331258be31a0d95d32d539d2c8f3d3 446 Gene3D G3DSA:3.40.640.10 124 340 6.9E-64 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN78_07785 f9331258be31a0d95d32d539d2c8f3d3 446 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 68 3.1E-12 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN78_07785 f9331258be31a0d95d32d539d2c8f3d3 446 SUPERFAMILY SSF53383 83 443 3.32E-77 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_01555 c0b6ca77278f9072dd1060837a5bede9 142 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 125 7.6E-12 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BEN78_01555 c0b6ca77278f9072dd1060837a5bede9 142 Gene3D G3DSA:3.10.180.10 1 129 1.4E-35 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN78_01555 c0b6ca77278f9072dd1060837a5bede9 142 SUPERFAMILY SSF54593 12 131 2.89E-26 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN78_07855 698933d34e84a6c50a5dd943a1d3184e 89 SMART SM01294 13 83 0.0095 T 13-10-2018 BEN78_07855 698933d34e84a6c50a5dd943a1d3184e 89 Gene3D G3DSA:1.10.1200.10 6 89 1.2E-17 T 13-10-2018 IPR036736 ACP-like superfamily BEN78_07855 698933d34e84a6c50a5dd943a1d3184e 89 SUPERFAMILY SSF47336 5 86 2.09E-12 T 13-10-2018 IPR036736 ACP-like superfamily BEN78_07855 698933d34e84a6c50a5dd943a1d3184e 89 Pfam PF00550 Phosphopantetheine attachment site 11 65 3.8E-8 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain BEN78_15010 18e4e03cf9badc91c7a4b0075cc0ae6f 301 Gene3D G3DSA:3.20.20.70 1 298 2.1E-129 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_15010 18e4e03cf9badc91c7a4b0075cc0ae6f 301 SUPERFAMILY SSF51569 3 292 1.23E-71 T 13-10-2018 BEN78_15010 18e4e03cf9badc91c7a4b0075cc0ae6f 301 Pfam PF00682 HMGL-like 5 275 9.6E-52 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 BEN78_09085 e487d2a14b178df7d190f36c42d9ed47 107 Pfam PF00085 Thioredoxin 21 103 3.9E-11 T 13-10-2018 IPR013766 Thioredoxin domain GO:0045454 BEN78_09085 e487d2a14b178df7d190f36c42d9ed47 107 Gene3D G3DSA:3.40.30.10 4 106 7.5E-19 T 13-10-2018 BEN78_09085 e487d2a14b178df7d190f36c42d9ed47 107 SUPERFAMILY SSF52833 23 103 2.12E-17 T 13-10-2018 IPR036249 Thioredoxin-like superfamily BEN78_13785 4f9a8cabbba1c03bd981326492a73d76 386 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 12 344 33.046 T 13-10-2018 IPR003770 Endolytic murein transglycosylase BEN78_13785 4f9a8cabbba1c03bd981326492a73d76 386 Gene3D G3DSA:3.30.160.60 312 349 3.4E-10 T 13-10-2018 BEN78_13785 4f9a8cabbba1c03bd981326492a73d76 386 Pfam PF02618 YceG-like family 51 339 5.2E-76 T 13-10-2018 IPR003770 Endolytic murein transglycosylase BEN78_13785 4f9a8cabbba1c03bd981326492a73d76 386 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 13 346 2.0E-75 T 13-10-2018 IPR003770 Endolytic murein transglycosylase BEN78_05305 1cbfd69b3c98e7538ad807fb66ece947 206 Gene3D G3DSA:3.40.50.1000 11 187 4.5E-31 T 13-10-2018 IPR023214 HAD superfamily BEN78_05305 1cbfd69b3c98e7538ad807fb66ece947 206 Gene3D G3DSA:1.10.150.240 23 88 4.5E-31 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BEN78_05305 1cbfd69b3c98e7538ad807fb66ece947 206 SUPERFAMILY SSF56784 9 197 6.86E-31 T 13-10-2018 IPR036412 HAD-like superfamily BEN78_05305 1cbfd69b3c98e7538ad807fb66ece947 206 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 122 186 5.0E-9 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BEN78_11265 6515fab2cf4cd82fb6bb4eeb62bfa1f9 396 SUPERFAMILY SSF46955 1 51 5.04E-7 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily BEN78_11265 6515fab2cf4cd82fb6bb4eeb62bfa1f9 396 PRINTS PR00143 Citrate synthase signature 208 223 9.5E-18 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 BEN78_11265 6515fab2cf4cd82fb6bb4eeb62bfa1f9 396 PRINTS PR00143 Citrate synthase signature 283 303 9.5E-18 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 BEN78_11265 6515fab2cf4cd82fb6bb4eeb62bfa1f9 396 PRINTS PR00143 Citrate synthase signature 357 371 9.5E-18 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 BEN78_11265 6515fab2cf4cd82fb6bb4eeb62bfa1f9 396 PRINTS PR00143 Citrate synthase signature 230 258 9.5E-18 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 BEN78_11265 6515fab2cf4cd82fb6bb4eeb62bfa1f9 396 Gene3D G3DSA:1.10.1660.10 1 64 3.3E-6 T 13-10-2018 BEN78_11265 6515fab2cf4cd82fb6bb4eeb62bfa1f9 396 SUPERFAMILY SSF48256 66 395 4.58E-66 T 13-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 BEN78_11265 6515fab2cf4cd82fb6bb4eeb62bfa1f9 396 Pfam PF12728 Helix-turn-helix domain 1 51 9.5E-7 T 13-10-2018 BEN78_11265 6515fab2cf4cd82fb6bb4eeb62bfa1f9 396 Gene3D G3DSA:1.10.230.10 256 351 3.3E-45 T 13-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain BEN78_11265 6515fab2cf4cd82fb6bb4eeb62bfa1f9 396 Gene3D G3DSA:1.10.580.10 202 377 3.3E-45 T 13-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 BEN78_11265 6515fab2cf4cd82fb6bb4eeb62bfa1f9 396 Pfam PF00285 Citrate synthase, C-terminal domain 67 387 1.0E-56 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 BEN78_00725 1725d6eb1b3acf623654651c388fcee4 158 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 145 29.948 T 13-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 BEN78_00725 1725d6eb1b3acf623654651c388fcee4 158 Pfam PF03100 CcmE 5 135 5.1E-39 T 13-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 BEN78_00725 1725d6eb1b3acf623654651c388fcee4 158 SUPERFAMILY SSF82093 30 141 7.06E-35 T 13-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 BEN78_00725 1725d6eb1b3acf623654651c388fcee4 158 Gene3D G3DSA:2.40.50.140 30 141 2.6E-36 T 13-10-2018 BEN78_07830 b11a75a6a9307c96426ec39aa6da26e4 281 Gene3D G3DSA:3.40.50.720 103 248 8.9E-78 T 13-10-2018 BEN78_07830 b11a75a6a9307c96426ec39aa6da26e4 281 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 118 194 2.0E-10 T 13-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase BEN78_07830 b11a75a6a9307c96426ec39aa6da26e4 281 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 6 271 1.3E-73 T 13-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 BEN78_07830 b11a75a6a9307c96426ec39aa6da26e4 281 SUPERFAMILY SSF53223 4 102 1.78E-31 T 13-10-2018 BEN78_07830 b11a75a6a9307c96426ec39aa6da26e4 281 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 8 90 7.4E-26 T 13-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 BEN78_07830 b11a75a6a9307c96426ec39aa6da26e4 281 SUPERFAMILY SSF51735 103 271 5.73E-38 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_07830 b11a75a6a9307c96426ec39aa6da26e4 281 Gene3D G3DSA:3.40.50.10860 7 258 8.9E-78 T 13-10-2018 BEN78_07830 b11a75a6a9307c96426ec39aa6da26e4 281 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 3 272 32.397 T 13-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 BEN78_14295 dd9c06e00295d7c8b3f920c5151b5e7c 305 Pfam PF03466 LysR substrate binding domain 92 295 1.3E-51 T 13-10-2018 IPR005119 LysR, substrate-binding BEN78_14295 dd9c06e00295d7c8b3f920c5151b5e7c 305 SUPERFAMILY SSF46785 9 115 6.93E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_14295 dd9c06e00295d7c8b3f920c5151b5e7c 305 Gene3D G3DSA:3.40.190.290 95 302 2.4E-55 T 13-10-2018 BEN78_14295 dd9c06e00295d7c8b3f920c5151b5e7c 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.1E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_14295 dd9c06e00295d7c8b3f920c5151b5e7c 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.1E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_14295 dd9c06e00295d7c8b3f920c5151b5e7c 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.1E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_14295 dd9c06e00295d7c8b3f920c5151b5e7c 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 7.4E-22 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_14295 dd9c06e00295d7c8b3f920c5151b5e7c 305 SUPERFAMILY SSF53850 95 299 3.08E-50 T 13-10-2018 BEN78_14295 dd9c06e00295d7c8b3f920c5151b5e7c 305 Gene3D G3DSA:1.10.10.10 1 85 3.8E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_05925 115fd33ff86918ae3ac987f92786ae5d 119 Gene3D G3DSA:1.20.1290.10 1 116 3.3E-35 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 BEN78_05925 115fd33ff86918ae3ac987f92786ae5d 119 SUPERFAMILY SSF69118 5 111 1.57E-28 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 BEN78_05925 115fd33ff86918ae3ac987f92786ae5d 119 Pfam PF02627 Carboxymuconolactone decarboxylase family 26 105 1.0E-22 T 13-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 BEN78_05925 115fd33ff86918ae3ac987f92786ae5d 119 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 42 90 9.2E-15 T 13-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 BEN78_12335 957bcdbf6560765def5ff2d4188ed17c 134 Gene3D G3DSA:3.10.129.10 1 131 1.8E-38 T 13-10-2018 BEN78_12335 957bcdbf6560765def5ff2d4188ed17c 134 Pfam PF13279 Thioesterase-like superfamily 15 130 3.5E-16 T 13-10-2018 BEN78_12335 957bcdbf6560765def5ff2d4188ed17c 134 SUPERFAMILY SSF54637 8 132 1.59E-32 T 13-10-2018 IPR029069 HotDog domain superfamily BEN78_06825 7f7f93729c9e5118c6c2de61b9e22bb7 176 Gene3D G3DSA:3.10.420.10 2 173 3.5E-54 T 13-10-2018 IPR035958 SecB-like superfamily BEN78_06825 7f7f93729c9e5118c6c2de61b9e22bb7 176 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 138 156 5.5E-34 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BEN78_06825 7f7f93729c9e5118c6c2de61b9e22bb7 176 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 25 42 5.5E-34 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BEN78_06825 7f7f93729c9e5118c6c2de61b9e22bb7 176 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 88 108 5.5E-34 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BEN78_06825 7f7f93729c9e5118c6c2de61b9e22bb7 176 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 112 134 5.5E-34 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BEN78_06825 7f7f93729c9e5118c6c2de61b9e22bb7 176 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 21 156 4.4E-48 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BEN78_06825 7f7f93729c9e5118c6c2de61b9e22bb7 176 Hamap MF_00821 Protein-export protein SecB [secB]. 1 160 31.59 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BEN78_06825 7f7f93729c9e5118c6c2de61b9e22bb7 176 Pfam PF02556 Preprotein translocase subunit SecB 18 158 1.2E-51 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BEN78_06825 7f7f93729c9e5118c6c2de61b9e22bb7 176 SUPERFAMILY SSF54611 12 155 6.32E-46 T 13-10-2018 IPR035958 SecB-like superfamily BEN78_09615 6688189e9fd2c169a49279426b1f6745 210 Pfam PF01121 Dephospho-CoA kinase 4 184 1.4E-54 T 13-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 BEN78_09615 6688189e9fd2c169a49279426b1f6745 210 Gene3D G3DSA:3.40.50.300 2 206 7.5E-58 T 13-10-2018 BEN78_09615 6688189e9fd2c169a49279426b1f6745 210 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 5 189 1.4E-44 T 13-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 BEN78_09615 6688189e9fd2c169a49279426b1f6745 210 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 3 199 25.409 T 13-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 BEN78_09615 6688189e9fd2c169a49279426b1f6745 210 SUPERFAMILY SSF52540 1 191 5.23E-31 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_16495 b5bdbf30fbd5e273469f1d929a068646 269 Pfam PF01564 Spermine/spermidine synthase domain 123 184 4.2E-8 T 13-10-2018 BEN78_16495 b5bdbf30fbd5e273469f1d929a068646 269 Gene3D G3DSA:3.40.50.150 33 255 2.4E-42 T 13-10-2018 BEN78_16495 b5bdbf30fbd5e273469f1d929a068646 269 SUPERFAMILY SSF53335 39 235 3.45E-33 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_15730 f3bc544e246ef2172c38dc265f23114c 168 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 13-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 BEN78_15730 f3bc544e246ef2172c38dc265f23114c 168 Pfam PF00255 Glutathione peroxidase 4 111 5.6E-40 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 BEN78_15730 f3bc544e246ef2172c38dc265f23114c 168 Gene3D G3DSA:3.40.30.10 1 167 9.2E-65 T 13-10-2018 BEN78_15730 f3bc544e246ef2172c38dc265f23114c 168 PRINTS PR01011 Glutathione peroxidase family signature 22 39 2.6E-19 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 BEN78_15730 f3bc544e246ef2172c38dc265f23114c 168 PRINTS PR01011 Glutathione peroxidase family signature 123 132 2.6E-19 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 BEN78_15730 f3bc544e246ef2172c38dc265f23114c 168 PRINTS PR01011 Glutathione peroxidase family signature 57 73 2.6E-19 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 BEN78_15730 f3bc544e246ef2172c38dc265f23114c 168 PIRSF PIRSF000303 1 163 7.1E-63 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 BEN78_15730 f3bc544e246ef2172c38dc265f23114c 168 SUPERFAMILY SSF52833 3 159 1.47E-60 T 13-10-2018 IPR036249 Thioredoxin-like superfamily BEN78_08420 8dad8afeccc94c802aa813538dbd30b0 379 SUPERFAMILY SSF47384 150 219 6.67E-10 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN78_08420 8dad8afeccc94c802aa813538dbd30b0 379 SMART SM00387 262 370 9.1E-26 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_08420 8dad8afeccc94c802aa813538dbd30b0 379 Gene3D G3DSA:1.10.287.130 147 219 1.3E-14 T 13-10-2018 BEN78_08420 8dad8afeccc94c802aa813538dbd30b0 379 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 266 369 3.9E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_08420 8dad8afeccc94c802aa813538dbd30b0 379 SMART SM00388 155 221 1.9E-8 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_08420 8dad8afeccc94c802aa813538dbd30b0 379 Pfam PF00512 His Kinase A (phospho-acceptor) domain 155 219 5.3E-8 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_08420 8dad8afeccc94c802aa813538dbd30b0 379 PRINTS PR00344 Bacterial sensor protein C-terminal signature 317 327 8.8E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_08420 8dad8afeccc94c802aa813538dbd30b0 379 PRINTS PR00344 Bacterial sensor protein C-terminal signature 299 313 8.8E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_08420 8dad8afeccc94c802aa813538dbd30b0 379 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 367 8.8E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_08420 8dad8afeccc94c802aa813538dbd30b0 379 PRINTS PR00344 Bacterial sensor protein C-terminal signature 330 348 8.8E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_08420 8dad8afeccc94c802aa813538dbd30b0 379 Gene3D G3DSA:3.30.565.10 221 373 4.1E-39 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_08420 8dad8afeccc94c802aa813538dbd30b0 379 SUPERFAMILY SSF55874 212 369 7.73E-37 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_11920 d301deb834d56a0b073f4f265229240b 626 Gene3D G3DSA:3.40.50.200 157 518 3.6E-97 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BEN78_11920 d301deb834d56a0b073f4f265229240b 626 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 194 205 - T 13-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site BEN78_11920 d301deb834d56a0b073f4f265229240b 626 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 548 614 3.6E-9 T 13-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial BEN78_11920 d301deb834d56a0b073f4f265229240b 626 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 446 456 - T 13-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site BEN78_11920 d301deb834d56a0b073f4f265229240b 626 Pfam PF00082 Subtilase family 189 489 9.3E-48 T 13-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BEN78_11920 d301deb834d56a0b073f4f265229240b 626 SUPERFAMILY SSF52743 175 513 2.36E-75 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BEN78_11920 d301deb834d56a0b073f4f265229240b 626 PRINTS PR00723 Subtilisin serine protease family (S8) signature 257 270 1.6E-21 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN78_11920 d301deb834d56a0b073f4f265229240b 626 PRINTS PR00723 Subtilisin serine protease family (S8) signature 189 208 1.6E-21 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN78_11920 d301deb834d56a0b073f4f265229240b 626 PRINTS PR00723 Subtilisin serine protease family (S8) signature 445 461 1.6E-21 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN78_11920 d301deb834d56a0b073f4f265229240b 626 Gene3D G3DSA:2.60.120.380 528 625 1.3E-16 T 13-10-2018 BEN78_02225 e6cc70c08c4c35b69e18b4c125c7f8f5 111 Pfam PF00355 Rieske [2Fe-2S] domain 4 96 1.3E-17 T 13-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 BEN78_02225 e6cc70c08c4c35b69e18b4c125c7f8f5 111 SUPERFAMILY SSF50022 4 106 1.7E-26 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BEN78_02225 e6cc70c08c4c35b69e18b4c125c7f8f5 111 Gene3D G3DSA:2.102.10.10 1 111 5.4E-29 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BEN78_08615 6ec035a06e38856829d11d66acbd4327 667 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 40 97 8.1E-20 T 13-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 BEN78_08615 6ec035a06e38856829d11d66acbd4327 667 Gene3D G3DSA:3.40.50.12780 70 532 4.2E-108 T 13-10-2018 BEN78_08615 6ec035a06e38856829d11d66acbd4327 667 Gene3D G3DSA:3.30.300.30 535 665 1.4E-30 T 13-10-2018 BEN78_08615 6ec035a06e38856829d11d66acbd4327 667 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 18 662 53.074 T 13-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 BEN78_08615 6ec035a06e38856829d11d66acbd4327 667 Pfam PF13193 AMP-binding enzyme C-terminal domain 548 626 9.7E-26 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BEN78_08615 6ec035a06e38856829d11d66acbd4327 667 SUPERFAMILY SSF56801 32 661 1.83E-187 T 13-10-2018 BEN78_08615 6ec035a06e38856829d11d66acbd4327 667 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 36 660 0.0 T 13-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 BEN78_08615 6ec035a06e38856829d11d66acbd4327 667 ProSitePatterns PS00455 Putative AMP-binding domain signature. 278 289 - T 13-10-2018 IPR020845 AMP-binding, conserved site BEN78_08615 6ec035a06e38856829d11d66acbd4327 667 Pfam PF00501 AMP-binding enzyme 99 539 9.9E-95 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BEN78_09025 f536f42f64da86ff4d245639d3631749 237 Pfam PF13419 Haloacid dehalogenase-like hydrolase 70 199 1.1E-12 T 13-10-2018 BEN78_09025 f536f42f64da86ff4d245639d3631749 237 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 92 193 1.9E-10 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BEN78_09025 f536f42f64da86ff4d245639d3631749 237 Gene3D G3DSA:3.40.50.1000 6 220 4.6E-59 T 13-10-2018 IPR023214 HAD superfamily BEN78_09025 f536f42f64da86ff4d245639d3631749 237 SUPERFAMILY SSF56784 4 228 1.18E-40 T 13-10-2018 IPR036412 HAD-like superfamily BEN78_09025 f536f42f64da86ff4d245639d3631749 237 Gene3D G3DSA:1.20.120.1600 19 102 4.6E-59 T 13-10-2018 BEN78_03835 2505867ad6562ad47f6b424983a2bbe3 157 SUPERFAMILY SSF47240 1 156 1.43E-54 T 13-10-2018 IPR009078 Ferritin-like superfamily BEN78_03835 2505867ad6562ad47f6b424983a2bbe3 157 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BEN78_03835 2505867ad6562ad47f6b424983a2bbe3 157 PIRSF PIRSF002560 1 157 8.2E-72 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BEN78_03835 2505867ad6562ad47f6b424983a2bbe3 157 TIGRFAM TIGR00754 bfr: bacterioferritin 1 157 8.4E-75 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BEN78_03835 2505867ad6562ad47f6b424983a2bbe3 157 Pfam PF00210 Ferritin-like domain 9 144 6.5E-38 T 13-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 BEN78_03835 2505867ad6562ad47f6b424983a2bbe3 157 PRINTS PR00601 Bacterioferritin signature 128 149 7.4E-70 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BEN78_03835 2505867ad6562ad47f6b424983a2bbe3 157 PRINTS PR00601 Bacterioferritin signature 86 106 7.4E-70 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BEN78_03835 2505867ad6562ad47f6b424983a2bbe3 157 PRINTS PR00601 Bacterioferritin signature 107 127 7.4E-70 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BEN78_03835 2505867ad6562ad47f6b424983a2bbe3 157 PRINTS PR00601 Bacterioferritin signature 44 64 7.4E-70 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BEN78_03835 2505867ad6562ad47f6b424983a2bbe3 157 PRINTS PR00601 Bacterioferritin signature 65 85 7.4E-70 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BEN78_03835 2505867ad6562ad47f6b424983a2bbe3 157 PRINTS PR00601 Bacterioferritin signature 23 43 7.4E-70 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BEN78_03835 2505867ad6562ad47f6b424983a2bbe3 157 PRINTS PR00601 Bacterioferritin signature 3 22 7.4E-70 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BEN78_03835 2505867ad6562ad47f6b424983a2bbe3 157 Gene3D G3DSA:1.20.1260.10 1 157 1.2E-72 T 13-10-2018 IPR012347 Ferritin-like BEN78_03335 e507aee465c6ac037a8df0ff33433f4a 250 Gene3D G3DSA:3.40.50.300 39 249 2.3E-41 T 13-10-2018 BEN78_03335 e507aee465c6ac037a8df0ff33433f4a 250 SMART SM00382 58 230 2.4E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_03335 e507aee465c6ac037a8df0ff33433f4a 250 SUPERFAMILY SSF52540 46 244 4.54E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_03335 e507aee465c6ac037a8df0ff33433f4a 250 Pfam PF00005 ABC transporter 49 180 2.1E-20 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_03335 e507aee465c6ac037a8df0ff33433f4a 250 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN78_01225 68010981d96c0dea0249ce3d10f9c67e 415 SUPERFAMILY SSF54373 269 355 6.54E-12 T 13-10-2018 BEN78_01225 68010981d96c0dea0249ce3d10f9c67e 415 SUPERFAMILY SSF51905 6 414 2.14E-44 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_01225 68010981d96c0dea0249ce3d10f9c67e 415 Pfam PF01266 FAD dependent oxidoreductase 6 396 4.4E-57 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 BEN78_01225 68010981d96c0dea0249ce3d10f9c67e 415 Gene3D G3DSA:3.30.9.10 137 356 1.2E-53 T 13-10-2018 BEN78_01225 68010981d96c0dea0249ce3d10f9c67e 415 Gene3D G3DSA:3.50.50.60 106 397 1.2E-53 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_01225 68010981d96c0dea0249ce3d10f9c67e 415 Gene3D G3DSA:3.50.50.60 6 61 2.9E-10 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_14600 34a9356c267cfda8880a0d04e8f2b4f8 624 SUPERFAMILY SSF64518 165 621 6.15E-44 T 13-10-2018 BEN78_14600 34a9356c267cfda8880a0d04e8f2b4f8 624 PRINTS PR01005 Flagellar hook-associated protein signature 403 420 8.2E-13 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BEN78_14600 34a9356c267cfda8880a0d04e8f2b4f8 624 PRINTS PR01005 Flagellar hook-associated protein signature 49 71 8.2E-13 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BEN78_14600 34a9356c267cfda8880a0d04e8f2b4f8 624 PRINTS PR01005 Flagellar hook-associated protein signature 156 180 8.2E-13 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BEN78_14600 34a9356c267cfda8880a0d04e8f2b4f8 624 PRINTS PR01005 Flagellar hook-associated protein signature 123 143 8.2E-13 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BEN78_14600 34a9356c267cfda8880a0d04e8f2b4f8 624 PRINTS PR01005 Flagellar hook-associated protein signature 11 34 8.2E-13 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BEN78_14600 34a9356c267cfda8880a0d04e8f2b4f8 624 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 565 619 1.0E-11 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BEN78_14600 34a9356c267cfda8880a0d04e8f2b4f8 624 Pfam PF00460 Flagella basal body rod protein 5 34 1.0E-6 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BEN78_14600 34a9356c267cfda8880a0d04e8f2b4f8 624 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 4 324 2.5E-62 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BEN78_05290 4a3565cd65c9d1f0ff07021f40e450a6 209 Gene3D G3DSA:3.20.20.70 7 207 2.5E-54 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_05290 4a3565cd65c9d1f0ff07021f40e450a6 209 SUPERFAMILY SSF51391 9 205 8.11E-57 T 13-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BEN78_05290 4a3565cd65c9d1f0ff07021f40e450a6 209 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 12 201 2.4E-51 T 13-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BEN78_05290 4a3565cd65c9d1f0ff07021f40e450a6 209 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 10 208 23.173 T 13-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BEN78_05290 4a3565cd65c9d1f0ff07021f40e450a6 209 Pfam PF02581 Thiamine monophosphate synthase 12 190 1.7E-49 T 13-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BEN78_12695 cba89521c269a7c633393c150e6a8bc8 405 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 63 388 8.3E-47 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BEN78_12695 cba89521c269a7c633393c150e6a8bc8 405 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 17 399 1.9E-184 T 13-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BEN78_12695 cba89521c269a7c633393c150e6a8bc8 405 Gene3D G3DSA:3.40.50.1100 20 216 4.1E-178 T 13-10-2018 BEN78_12695 cba89521c269a7c633393c150e6a8bc8 405 Gene3D G3DSA:3.40.50.1100 64 394 4.1E-178 T 13-10-2018 BEN78_12695 cba89521c269a7c633393c150e6a8bc8 405 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 12 401 50.74 T 13-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BEN78_12695 cba89521c269a7c633393c150e6a8bc8 405 PIRSF PIRSF001413 6 404 3.0E-156 T 13-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BEN78_12695 cba89521c269a7c633393c150e6a8bc8 405 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 91 105 - T 13-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BEN78_12695 cba89521c269a7c633393c150e6a8bc8 405 SUPERFAMILY SSF53686 13 397 2.36E-141 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BEN78_05820 d3ff7ac5fcc29fe9fd36b58edebe3df8 160 Gene3D G3DSA:3.40.50.360 2 146 7.3E-17 T 13-10-2018 IPR029039 Flavoprotein-like superfamily BEN78_05820 d3ff7ac5fcc29fe9fd36b58edebe3df8 160 TIGRFAM TIGR01754 flav_RNR: putative ribonucleotide reductase-associated flavodoxin 1 143 2.0E-58 T 13-10-2018 IPR010088 Ribonucleotide reductase-associated flavodoxin, putative BEN78_05820 d3ff7ac5fcc29fe9fd36b58edebe3df8 160 Pfam PF12641 Flavodoxin domain 5 113 6.6E-8 T 13-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 BEN78_05820 d3ff7ac5fcc29fe9fd36b58edebe3df8 160 SUPERFAMILY SSF52218 2 144 2.27E-22 T 13-10-2018 IPR029039 Flavoprotein-like superfamily BEN78_08945 a312c818ad6b5cb6286fc86ecf6a045a 334 Hamap MF_00206 Lipoyl synthase [lipA]. 47 334 149.028 T 13-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BEN78_08945 a312c818ad6b5cb6286fc86ecf6a045a 334 Pfam PF04055 Radical SAM superfamily 100 263 1.9E-16 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BEN78_08945 a312c818ad6b5cb6286fc86ecf6a045a 334 Gene3D G3DSA:3.20.20.70 88 300 6.7E-23 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_08945 a312c818ad6b5cb6286fc86ecf6a045a 334 TIGRFAM TIGR00510 lipA: lipoyl synthase 44 327 4.1E-132 T 13-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BEN78_08945 a312c818ad6b5cb6286fc86ecf6a045a 334 SMART SM00729 94 304 2.5E-17 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BEN78_08945 a312c818ad6b5cb6286fc86ecf6a045a 334 SUPERFAMILY SSF102114 66 329 1.44E-66 T 13-10-2018 BEN78_08945 a312c818ad6b5cb6286fc86ecf6a045a 334 PIRSF PIRSF005963 2 334 8.9E-137 T 13-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BEN78_08945 a312c818ad6b5cb6286fc86ecf6a045a 334 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 45 83 7.0E-7 T 13-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BEN78_06865 99167416c5e000e740a6acc13f22b4dd 214 Pfam PF02036 SCP-2 sterol transfer family 24 122 4.8E-10 T 13-10-2018 IPR003033 SCP2 sterol-binding domain BEN78_16340 d45bb98ceffd411a83c47f4a9f1cba12 256 SUPERFAMILY SSF51735 7 253 1.42E-64 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_16340 d45bb98ceffd411a83c47f4a9f1cba12 256 Gene3D G3DSA:3.40.50.720 2 255 3.9E-63 T 13-10-2018 BEN78_16340 d45bb98ceffd411a83c47f4a9f1cba12 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 1.1E-6 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_16340 d45bb98ceffd411a83c47f4a9f1cba12 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.1E-6 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_16340 d45bb98ceffd411a83c47f4a9f1cba12 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 1.1E-6 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_16340 d45bb98ceffd411a83c47f4a9f1cba12 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 1.9E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_16340 d45bb98ceffd411a83c47f4a9f1cba12 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.9E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_16340 d45bb98ceffd411a83c47f4a9f1cba12 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.9E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_16340 d45bb98ceffd411a83c47f4a9f1cba12 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.9E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_16340 d45bb98ceffd411a83c47f4a9f1cba12 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 1.9E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_16340 d45bb98ceffd411a83c47f4a9f1cba12 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 1.9E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_16340 d45bb98ceffd411a83c47f4a9f1cba12 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 253 1.2E-51 T 13-10-2018 BEN78_00135 2cf5cb6668c70c3350bdd1f65d4092fd 311 SUPERFAMILY SSF53850 90 292 3.8E-44 T 13-10-2018 BEN78_00135 2cf5cb6668c70c3350bdd1f65d4092fd 311 Pfam PF03466 LysR substrate binding domain 90 291 7.4E-47 T 13-10-2018 IPR005119 LysR, substrate-binding BEN78_00135 2cf5cb6668c70c3350bdd1f65d4092fd 311 Gene3D G3DSA:3.40.190.10 91 288 4.8E-62 T 13-10-2018 BEN78_00135 2cf5cb6668c70c3350bdd1f65d4092fd 311 Gene3D G3DSA:3.40.190.10 161 263 4.8E-62 T 13-10-2018 BEN78_00135 2cf5cb6668c70c3350bdd1f65d4092fd 311 SUPERFAMILY SSF46785 6 85 1.46E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_00135 2cf5cb6668c70c3350bdd1f65d4092fd 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 5.6E-18 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_00135 2cf5cb6668c70c3350bdd1f65d4092fd 311 Gene3D G3DSA:1.10.10.10 3 89 4.7E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_16115 c9a5c51c80ac99377bdf87e95ae63a28 492 Gene3D G3DSA:1.20.210.10 2 470 8.0E-202 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_16115 c9a5c51c80ac99377bdf87e95ae63a28 492 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 7 470 4.9E-229 T 13-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 BEN78_16115 c9a5c51c80ac99377bdf87e95ae63a28 492 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 202 257 - T 13-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_16115 c9a5c51c80ac99377bdf87e95ae63a28 492 SUPERFAMILY SSF81442 7 467 1.7E-125 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_16115 c9a5c51c80ac99377bdf87e95ae63a28 492 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 11 442 2.5E-115 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_14060 75ca9e1e7a467efd19ad56a79d319cce 115 Pfam PF01042 Endoribonuclease L-PSP 3 114 2.2E-24 T 13-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 BEN78_14060 75ca9e1e7a467efd19ad56a79d319cce 115 SUPERFAMILY SSF55298 3 114 2.67E-28 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BEN78_14060 75ca9e1e7a467efd19ad56a79d319cce 115 Gene3D G3DSA:3.30.1330.40 1 115 1.6E-39 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BEN78_14060 75ca9e1e7a467efd19ad56a79d319cce 115 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 90 108 - T 13-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 BEN78_16450 bcdec62d2de6cec673038c634512dc41 167 Gene3D G3DSA:1.10.10.10 3 158 9.5E-37 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_16450 bcdec62d2de6cec673038c634512dc41 167 ProSitePatterns PS01117 MarR-type HTH domain signature. 83 117 - T 13-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site BEN78_16450 bcdec62d2de6cec673038c634512dc41 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 100 8.3E-13 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN78_16450 bcdec62d2de6cec673038c634512dc41 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 84 8.3E-13 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN78_16450 bcdec62d2de6cec673038c634512dc41 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 104 120 8.3E-13 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN78_16450 bcdec62d2de6cec673038c634512dc41 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 134 154 8.3E-13 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN78_16450 bcdec62d2de6cec673038c634512dc41 167 SUPERFAMILY SSF46785 19 158 1.85E-34 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_16450 bcdec62d2de6cec673038c634512dc41 167 SMART SM00347 44 144 2.4E-26 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN78_16450 bcdec62d2de6cec673038c634512dc41 167 Pfam PF01047 MarR family 51 108 6.8E-13 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN78_08010 d9f5e92e2c60f96b467baf5a73f5c88d 435 Pfam PF07690 Major Facilitator Superfamily 30 359 1.4E-11 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN78_08010 d9f5e92e2c60f96b467baf5a73f5c88d 435 Gene3D G3DSA:1.20.1250.20 10 224 9.4E-49 T 13-10-2018 BEN78_08010 d9f5e92e2c60f96b467baf5a73f5c88d 435 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 94 409 2.2E-102 T 13-10-2018 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0015757|GO:0016021|GO:1904659 BEN78_08010 d9f5e92e2c60f96b467baf5a73f5c88d 435 Gene3D G3DSA:1.20.1250.20 229 416 2.3E-61 T 13-10-2018 BEN78_08010 d9f5e92e2c60f96b467baf5a73f5c88d 435 SUPERFAMILY SSF103473 11 412 5.62E-37 T 13-10-2018 IPR036259 MFS transporter superfamily BEN78_08185 48cfe806f37bce648fd38d8a0b7d0f58 234 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 13 223 5.5E-31 T 13-10-2018 IPR010239 Conserved hypothetical protein CHP02001 BEN78_08185 48cfe806f37bce648fd38d8a0b7d0f58 234 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 26 215 4.7E-24 T 13-10-2018 IPR010239 Conserved hypothetical protein CHP02001 BEN78_01575 28ac4d411d2c4dd3297509d7eda0a714 646 Pfam PF13364 Beta-galactosidase jelly roll domain 288 359 2.6E-4 T 13-10-2018 IPR025300 Beta-galactosidase jelly roll domain KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024096|Reactome: R-HSA-2206308|Reactome: R-HSA-4085001|Reactome: R-HSA-6798695 BEN78_01575 28ac4d411d2c4dd3297509d7eda0a714 646 SUPERFAMILY SSF49785 244 367 9.67E-18 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily BEN78_01575 28ac4d411d2c4dd3297509d7eda0a714 646 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 103 208 8.6E-8 T 13-10-2018 IPR005181 Sialate O-acetylesterase domain BEN78_01575 28ac4d411d2c4dd3297509d7eda0a714 646 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 407 535 1.1E-13 T 13-10-2018 IPR005181 Sialate O-acetylesterase domain BEN78_01575 28ac4d411d2c4dd3297509d7eda0a714 646 Gene3D G3DSA:2.60.120.260 236 375 1.6E-15 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily BEN78_01575 28ac4d411d2c4dd3297509d7eda0a714 646 Gene3D G3DSA:3.40.50.1110 394 545 1.0E-15 T 13-10-2018 IPR036514 SGNH hydrolase superfamily BEN78_01575 28ac4d411d2c4dd3297509d7eda0a714 646 Gene3D G3DSA:3.40.50.1110 104 227 3.5E-7 T 13-10-2018 IPR036514 SGNH hydrolase superfamily BEN78_01575 28ac4d411d2c4dd3297509d7eda0a714 646 SUPERFAMILY SSF52266 102 590 2.01E-68 T 13-10-2018 BEN78_07340 c3ea82bc8cbca8d996f7c392c6333a57 295 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 2 229 5.7E-39 T 13-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 BEN78_07340 c3ea82bc8cbca8d996f7c392c6333a57 295 SUPERFAMILY SSF51621 1 240 2.34E-55 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BEN78_07340 c3ea82bc8cbca8d996f7c392c6333a57 295 PIRSF PIRSF015582 1 295 3.3E-62 T 13-10-2018 IPR011206 Citrate lyase beta subunit-like BEN78_07340 c3ea82bc8cbca8d996f7c392c6333a57 295 Gene3D G3DSA:3.20.20.60 1 294 1.7E-76 T 13-10-2018 BEN78_02755 9618bfb1b7e2f1e5df926360b8d3abd7 60 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 18 50 5.0E-8 T 13-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 BEN78_06690 6953f625f349959c030c048c2dbf9026 537 Pfam PF01274 Malate synthase 19 537 8.5E-184 T 13-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 BEN78_06690 6953f625f349959c030c048c2dbf9026 537 SUPERFAMILY SSF51645 18 537 1.06E-171 T 13-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 BEN78_06690 6953f625f349959c030c048c2dbf9026 537 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 22 537 6.0E-210 T 13-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 BEN78_06690 6953f625f349959c030c048c2dbf9026 537 Gene3D G3DSA:3.20.20.360 14 408 3.0E-176 T 13-10-2018 BEN78_06690 6953f625f349959c030c048c2dbf9026 537 Gene3D G3DSA:1.20.1220.12 409 537 2.9E-33 T 13-10-2018 BEN78_06690 6953f625f349959c030c048c2dbf9026 537 PIRSF PIRSF001363 12 537 5.2E-220 T 13-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 BEN78_15595 6ba8509d349ecf5a1eb5f9baeba1cbf6 295 Gene3D G3DSA:3.30.70.1400 19 103 6.5E-16 T 13-10-2018 BEN78_15595 6ba8509d349ecf5a1eb5f9baeba1cbf6 295 Gene3D G3DSA:2.40.30.160 180 276 2.4E-20 T 13-10-2018 BEN78_15595 6ba8509d349ecf5a1eb5f9baeba1cbf6 295 SUPERFAMILY SSF103025 13 225 1.73E-38 T 13-10-2018 BEN78_15595 6ba8509d349ecf5a1eb5f9baeba1cbf6 295 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 171 235 8.5E-20 T 13-10-2018 IPR017703 YgfZ/GcvT conserved site BEN78_03030 4c852348c7d320219b10a2496c3c5ab7 387 SMART SM00257 39 87 1.5E-6 T 13-10-2018 IPR018392 LysM domain BEN78_03030 4c852348c7d320219b10a2496c3c5ab7 387 Gene3D G3DSA:3.10.350.10 38 85 1.9E-15 T 13-10-2018 IPR036779 LysM domain superfamily BEN78_03030 4c852348c7d320219b10a2496c3c5ab7 387 SUPERFAMILY SSF54106 38 86 4.05E-7 T 13-10-2018 BEN78_03030 4c852348c7d320219b10a2496c3c5ab7 387 Pfam PF01476 LysM domain 40 85 4.5E-13 T 13-10-2018 IPR018392 LysM domain BEN78_06475 178c633e7718ae1cab6f238c250ed294 508 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 130 141 8.3E-7 T 13-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 BEN78_06475 178c633e7718ae1cab6f238c250ed294 508 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 210 224 8.3E-7 T 13-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 BEN78_06475 178c633e7718ae1cab6f238c250ed294 508 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 99 107 8.3E-7 T 13-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 BEN78_06475 178c633e7718ae1cab6f238c250ed294 508 SUPERFAMILY SSF53474 94 479 3.21E-31 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_06475 178c633e7718ae1cab6f238c250ed294 508 Pfam PF00561 alpha/beta hydrolase fold 98 465 5.8E-22 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN78_11850 0ac36fa9346b28dca113c72a7c9ade43 674 SUPERFAMILY SSF55486 43 673 1.1E-137 T 13-10-2018 BEN78_11850 0ac36fa9346b28dca113c72a7c9ade43 674 Gene3D G3DSA:3.40.390.10 43 673 3.0E-148 T 13-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 BEN78_11850 0ac36fa9346b28dca113c72a7c9ade43 674 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 483 495 3.1E-5 T 13-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BEN78_11850 0ac36fa9346b28dca113c72a7c9ade43 674 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 504 520 3.1E-5 T 13-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BEN78_11850 0ac36fa9346b28dca113c72a7c9ade43 674 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 577 588 3.1E-5 T 13-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BEN78_11850 0ac36fa9346b28dca113c72a7c9ade43 674 Pfam PF05649 Peptidase family M13 46 421 1.5E-70 T 13-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 BEN78_11850 0ac36fa9346b28dca113c72a7c9ade43 674 Gene3D G3DSA:1.10.1380.10 71 460 3.0E-148 T 13-10-2018 BEN78_11850 0ac36fa9346b28dca113c72a7c9ade43 674 Pfam PF01431 Peptidase family M13 476 670 1.4E-42 T 13-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BEN78_16545 d64efcd11e4d562163f40ee562ccb71d 423 Pfam PF13520 Amino acid permease 3 388 9.6E-41 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BEN78_16545 d64efcd11e4d562163f40ee562ccb71d 423 Gene3D G3DSA:1.20.1740.10 1 419 9.8E-60 T 13-10-2018 BEN78_16545 d64efcd11e4d562163f40ee562ccb71d 423 PIRSF PIRSF006060 1 416 8.5E-43 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BEN78_10020 8626ca46ff2403700f942dc0fed4de02 479 SUPERFAMILY SSF48452 44 173 3.04E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_10020 8626ca46ff2403700f942dc0fed4de02 479 SUPERFAMILY SSF48452 126 265 2.31E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_10020 8626ca46ff2403700f942dc0fed4de02 479 Gene3D G3DSA:1.25.40.10 173 352 2.3E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_10020 8626ca46ff2403700f942dc0fed4de02 479 Gene3D G3DSA:1.25.40.10 26 172 1.3E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_04625 c8351525889cc5797cc6609e744e846a 656 SUPERFAMILY SSF53955 481 629 9.93E-45 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily BEN78_04625 c8351525889cc5797cc6609e744e846a 656 Gene3D G3DSA:1.25.20.10 38 385 4.7E-73 T 13-10-2018 BEN78_04625 c8351525889cc5797cc6609e744e846a 656 Pfam PF14718 Soluble lytic murein transglycosylase L domain 404 462 8.9E-12 T 13-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 BEN78_04625 c8351525889cc5797cc6609e744e846a 656 Gene3D G3DSA:1.10.530.10 473 636 2.1E-44 T 13-10-2018 BEN78_04625 c8351525889cc5797cc6609e744e846a 656 SUPERFAMILY SSF48435 36 476 6.41E-90 T 13-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 BEN78_04625 c8351525889cc5797cc6609e744e846a 656 Pfam PF01464 Transglycosylase SLT domain 483 592 5.4E-25 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 BEN78_05130 3739024d5aaacde1842763639fd41f66 82 SMART SM00530 1 59 4.5E-5 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN78_05130 3739024d5aaacde1842763639fd41f66 82 Pfam PF13560 Helix-turn-helix domain 1 57 5.7E-10 T 13-10-2018 BEN78_05130 3739024d5aaacde1842763639fd41f66 82 Gene3D G3DSA:1.10.260.40 1 80 2.7E-16 T 13-10-2018 BEN78_05130 3739024d5aaacde1842763639fd41f66 82 SUPERFAMILY SSF47413 1 64 2.25E-10 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN78_12080 d09817be8e765d994215df524f3a3006 272 PIRSF PIRSF000388 1 272 4.3E-91 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 BEN78_12080 d09817be8e765d994215df524f3a3006 272 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 10 271 41.123 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 BEN78_12080 d09817be8e765d994215df524f3a3006 272 Pfam PF02548 Ketopantoate hydroxymethyltransferase 10 266 4.4E-101 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 BEN78_12080 d09817be8e765d994215df524f3a3006 272 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 17 271 1.1E-92 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 BEN78_12080 d09817be8e765d994215df524f3a3006 272 SUPERFAMILY SSF51621 10 271 9.03E-97 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BEN78_12080 d09817be8e765d994215df524f3a3006 272 Gene3D G3DSA:3.20.20.60 8 272 3.0E-99 T 13-10-2018 BEN78_04290 104d0f4f6eb61c47513e713312d3f746 187 Pfam PF11454 Protein of unknown function (DUF3016) 41 177 3.8E-47 T 13-10-2018 IPR021557 Protein of unknown function DUF3016 BEN78_12685 0b9c3600ebe03190b03705eb1dc636b0 209 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 7 202 5.3E-41 T 13-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 BEN78_12685 0b9c3600ebe03190b03705eb1dc636b0 209 SUPERFAMILY SSF51366 5 205 2.51E-55 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BEN78_12685 0b9c3600ebe03190b03705eb1dc636b0 209 Gene3D G3DSA:3.20.20.70 2 208 8.7E-62 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_12685 0b9c3600ebe03190b03705eb1dc636b0 209 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 4 207 38.902 T 13-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 BEN78_01495 72b6154d321405af7121646ff0b4a148 251 SUPERFAMILY SSF51735 3 249 1.59E-73 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_01495 72b6154d321405af7121646ff0b4a148 251 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 187 1.9E-6 T 13-10-2018 BEN78_01495 72b6154d321405af7121646ff0b4a148 251 Gene3D G3DSA:3.40.50.720 1 250 1.5E-74 T 13-10-2018 BEN78_01495 72b6154d321405af7121646ff0b4a148 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 7.9E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_01495 72b6154d321405af7121646ff0b4a148 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 7.9E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_01495 72b6154d321405af7121646ff0b4a148 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 7.9E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_01495 72b6154d321405af7121646ff0b4a148 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.7E-30 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_01495 72b6154d321405af7121646ff0b4a148 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 2.7E-30 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_01495 72b6154d321405af7121646ff0b4a148 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 2.7E-30 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_01495 72b6154d321405af7121646ff0b4a148 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 2.7E-30 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_01495 72b6154d321405af7121646ff0b4a148 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.7E-30 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_01495 72b6154d321405af7121646ff0b4a148 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 2.7E-30 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_01495 72b6154d321405af7121646ff0b4a148 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 248 5.6E-57 T 13-10-2018 BEN78_03250 f881f2056652718a098e533979a17d94 259 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN78_03250 f881f2056652718a098e533979a17d94 259 SMART SM00382 27 226 2.7E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_03250 f881f2056652718a098e533979a17d94 259 SUPERFAMILY SSF52540 3 230 3.55E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_03250 f881f2056652718a098e533979a17d94 259 Pfam PF00005 ABC transporter 19 169 1.2E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_03250 f881f2056652718a098e533979a17d94 259 Gene3D G3DSA:3.40.50.300 2 254 2.0E-64 T 13-10-2018 BEN78_00790 767b5942ee7f8f11170ed582736497ef 166 Pfam PF09712 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) 1 44 3.3E-12 T 13-10-2018 IPR010123 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit BEN78_02840 2ed5218a2571f52d16e8cf9ff62925cc 832 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 2 23 0.0011 T 13-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BEN78_02840 2ed5218a2571f52d16e8cf9ff62925cc 832 Gene3D G3DSA:3.40.50.740 96 624 0.0 T 13-10-2018 BEN78_02840 2ed5218a2571f52d16e8cf9ff62925cc 832 Pfam PF00384 Molybdopterin oxidoreductase 96 569 1.7E-92 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_02840 2ed5218a2571f52d16e8cf9ff62925cc 832 Hamap MF_01630 Periplasmic nitrate reductase [napA]. 1 829 32.182 T 13-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 BEN78_02840 2ed5218a2571f52d16e8cf9ff62925cc 832 SUPERFAMILY SSF53706 38 701 5.1E-197 T 13-10-2018 BEN78_02840 2ed5218a2571f52d16e8cf9ff62925cc 832 Pfam PF01568 Molydopterin dinucleotide binding domain 715 823 1.0E-27 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 BEN78_02840 2ed5218a2571f52d16e8cf9ff62925cc 832 Gene3D G3DSA:3.30.200.210 39 667 0.0 T 13-10-2018 BEN78_02840 2ed5218a2571f52d16e8cf9ff62925cc 832 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 40 92 2.2E-16 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_02840 2ed5218a2571f52d16e8cf9ff62925cc 832 Gene3D G3DSA:2.40.40.20 705 829 5.6E-48 T 13-10-2018 BEN78_02840 2ed5218a2571f52d16e8cf9ff62925cc 832 SUPERFAMILY SSF50692 685 826 1.66E-40 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily BEN78_02840 2ed5218a2571f52d16e8cf9ff62925cc 832 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 3 828 0.0 T 13-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 BEN78_02840 2ed5218a2571f52d16e8cf9ff62925cc 832 Gene3D G3DSA:3.40.228.10 175 704 0.0 T 13-10-2018 BEN78_02840 2ed5218a2571f52d16e8cf9ff62925cc 832 SMART SM00926 39 93 3.8E-13 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_02840 2ed5218a2571f52d16e8cf9ff62925cc 832 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 44 61 - T 13-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 BEN78_12800 5ece66d622d3ef0d76b589deb1453efd 503 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 7 496 2.0E-189 T 13-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12800 5ece66d622d3ef0d76b589deb1453efd 503 Pfam PF00361 Proton-conducting membrane transporter 132 429 1.4E-77 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12800 5ece66d622d3ef0d76b589deb1453efd 503 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 388 414 1.0E-40 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12800 5ece66d622d3ef0d76b589deb1453efd 503 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 137 156 1.0E-40 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12800 5ece66d622d3ef0d76b589deb1453efd 503 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 167 191 1.0E-40 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12800 5ece66d622d3ef0d76b589deb1453efd 503 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 236 260 1.0E-40 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_14965 c9a5a61ca8703fa7e72773577ca82c7e 740 Gene3D G3DSA:2.40.170.20 52 740 2.3E-131 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_14965 c9a5a61ca8703fa7e72773577ca82c7e 740 SUPERFAMILY SSF56935 37 740 5.5E-110 T 13-10-2018 BEN78_14965 c9a5a61ca8703fa7e72773577ca82c7e 740 Pfam PF07715 TonB-dependent Receptor Plug Domain 61 171 1.4E-17 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_14965 c9a5a61ca8703fa7e72773577ca82c7e 740 Pfam PF00593 TonB dependent receptor 316 739 1.6E-36 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_13655 ae7442df2e758ca363f15b2bbd91a242 212 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 73 212 1.9E-28 T 13-10-2018 IPR018636 Protein of unknown function DUF2058 BEN78_06765 7bb18bfdce751c0b1363520673ef764c 315 Pfam PF00561 alpha/beta hydrolase fold 46 159 7.6E-20 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN78_06765 7bb18bfdce751c0b1363520673ef764c 315 PRINTS PR00412 Epoxide hydrolase signature 285 307 3.9E-5 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BEN78_06765 7bb18bfdce751c0b1363520673ef764c 315 PRINTS PR00412 Epoxide hydrolase signature 123 136 3.9E-5 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BEN78_06765 7bb18bfdce751c0b1363520673ef764c 315 PRINTS PR00412 Epoxide hydrolase signature 51 69 3.9E-5 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BEN78_06765 7bb18bfdce751c0b1363520673ef764c 315 SUPERFAMILY SSF53474 17 311 4.92E-58 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_06765 7bb18bfdce751c0b1363520673ef764c 315 Gene3D G3DSA:3.40.50.1820 12 311 1.1E-62 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_11420 428444b5183355f34b1d106fba1988e2 165 Gene3D G3DSA:1.10.10.10 15 102 4.7E-30 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_11420 428444b5183355f34b1d106fba1988e2 165 Gene3D G3DSA:3.30.1490.190 105 162 4.8E-14 T 13-10-2018 BEN78_11420 428444b5183355f34b1d106fba1988e2 165 Pfam PF01475 Ferric uptake regulator family 30 152 7.8E-8 T 13-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 BEN78_11420 428444b5183355f34b1d106fba1988e2 165 SUPERFAMILY SSF46785 25 157 3.11E-26 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_12785 c7d481dd8730e62f263263e0f7931a76 217 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 18 164 9.3E-34 T 13-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12785 c7d481dd8730e62f263263e0f7931a76 217 Gene3D G3DSA:1.20.120.1200 5 166 5.4E-40 T 13-10-2018 BEN78_00285 2f0467c8796281ff02cb1ccb717eef52 208 Gene3D G3DSA:3.40.50.150 28 207 2.0E-54 T 13-10-2018 BEN78_00285 2f0467c8796281ff02cb1ccb717eef52 208 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 13 206 27.918 T 13-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 BEN78_00285 2f0467c8796281ff02cb1ccb717eef52 208 Pfam PF01728 FtsJ-like methyltransferase 29 204 2.4E-52 T 13-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 BEN78_00285 2f0467c8796281ff02cb1ccb717eef52 208 PIRSF PIRSF005461 1 208 2.4E-72 T 13-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 BEN78_00285 2f0467c8796281ff02cb1ccb717eef52 208 SUPERFAMILY SSF53335 29 206 3.73E-39 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_00030 1b7f02a42daac857d96d714283dbc4cf 217 SUPERFAMILY SSF54292 46 130 3.01E-25 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 BEN78_00030 1b7f02a42daac857d96d714283dbc4cf 217 SUPERFAMILY SSF47741 127 209 8.24E-29 T 13-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily BEN78_00030 1b7f02a42daac857d96d714283dbc4cf 217 Pfam PF01799 [2Fe-2S] binding domain 116 203 1.8E-30 T 13-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 BEN78_00030 1b7f02a42daac857d96d714283dbc4cf 217 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 49 96 2.6E-8 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 BEN78_00030 1b7f02a42daac857d96d714283dbc4cf 217 Gene3D G3DSA:3.10.20.30 36 119 8.7E-31 T 13-10-2018 IPR012675 Beta-grasp domain superfamily BEN78_00030 1b7f02a42daac857d96d714283dbc4cf 217 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 82 90 - T 13-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 BEN78_00030 1b7f02a42daac857d96d714283dbc4cf 217 Gene3D G3DSA:1.10.150.120 120 212 9.3E-36 T 13-10-2018 BEN78_16850 1b7f02a42daac857d96d714283dbc4cf 217 SUPERFAMILY SSF54292 46 130 3.01E-25 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 BEN78_16850 1b7f02a42daac857d96d714283dbc4cf 217 SUPERFAMILY SSF47741 127 209 8.24E-29 T 13-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily BEN78_16850 1b7f02a42daac857d96d714283dbc4cf 217 Pfam PF01799 [2Fe-2S] binding domain 116 203 1.8E-30 T 13-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 BEN78_16850 1b7f02a42daac857d96d714283dbc4cf 217 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 49 96 2.6E-8 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 BEN78_16850 1b7f02a42daac857d96d714283dbc4cf 217 Gene3D G3DSA:3.10.20.30 36 119 8.7E-31 T 13-10-2018 IPR012675 Beta-grasp domain superfamily BEN78_16850 1b7f02a42daac857d96d714283dbc4cf 217 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 82 90 - T 13-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 BEN78_16850 1b7f02a42daac857d96d714283dbc4cf 217 Gene3D G3DSA:1.10.150.120 120 212 9.3E-36 T 13-10-2018 BEN78_08830 260f712399a3e6f252a39108e809beb3 514 Gene3D G3DSA:3.10.580.10 280 427 1.0E-39 T 13-10-2018 BEN78_08830 260f712399a3e6f252a39108e809beb3 514 SUPERFAMILY SSF54631 286 420 2.44E-27 T 13-10-2018 BEN78_08830 260f712399a3e6f252a39108e809beb3 514 Pfam PF00571 CBS domain 369 418 2.2E-5 T 13-10-2018 IPR000644 CBS domain BEN78_08830 260f712399a3e6f252a39108e809beb3 514 Gene3D G3DSA:3.30.465.10 428 510 1.2E-17 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 BEN78_08830 260f712399a3e6f252a39108e809beb3 514 Pfam PF03741 Integral membrane protein TerC family 15 203 3.9E-50 T 13-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 BEN78_08830 260f712399a3e6f252a39108e809beb3 514 Pfam PF03471 Transporter associated domain 435 509 3.8E-18 T 13-10-2018 IPR005170 Transporter-associated domain BEN78_08830 260f712399a3e6f252a39108e809beb3 514 SUPERFAMILY SSF56176 433 512 1.34E-17 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BEN78_08830 260f712399a3e6f252a39108e809beb3 514 SMART SM01091 432 511 1.2E-21 T 13-10-2018 IPR005170 Transporter-associated domain BEN78_08830 260f712399a3e6f252a39108e809beb3 514 SMART SM00116 308 357 0.41 T 13-10-2018 IPR000644 CBS domain BEN78_08830 260f712399a3e6f252a39108e809beb3 514 SMART SM00116 370 418 0.056 T 13-10-2018 IPR000644 CBS domain BEN78_04615 6fa02bf7d2cec51e740a035668b072f7 215 SUPERFAMILY SSF53335 14 195 9.34E-22 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_04615 6fa02bf7d2cec51e740a035668b072f7 215 Pfam PF13649 Methyltransferase domain 44 138 4.1E-10 T 13-10-2018 BEN78_04615 6fa02bf7d2cec51e740a035668b072f7 215 Gene3D G3DSA:3.40.50.150 17 214 3.6E-19 T 13-10-2018 BEN78_13690 46ce060b66dc919d3c3eb986b8a2e41d 410 SUPERFAMILY SSF51735 107 294 2.8E-56 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_13690 46ce060b66dc919d3c3eb986b8a2e41d 410 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 12 325 2.0E-36 T 13-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 BEN78_13690 46ce060b66dc919d3c3eb986b8a2e41d 410 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 199 221 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BEN78_13690 46ce060b66dc919d3c3eb986b8a2e41d 410 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 153 180 - T 13-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 BEN78_13690 46ce060b66dc919d3c3eb986b8a2e41d 410 Gene3D G3DSA:3.40.50.720 13 311 9.3E-106 T 13-10-2018 BEN78_13690 46ce060b66dc919d3c3eb986b8a2e41d 410 SUPERFAMILY SSF52283 8 134 1.76E-46 T 13-10-2018 BEN78_13690 46ce060b66dc919d3c3eb986b8a2e41d 410 SUPERFAMILY SSF55021 332 409 8.78E-16 T 13-10-2018 BEN78_13690 46ce060b66dc919d3c3eb986b8a2e41d 410 Gene3D G3DSA:3.40.50.720 108 296 9.3E-106 T 13-10-2018 BEN78_13690 46ce060b66dc919d3c3eb986b8a2e41d 410 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 117 293 6.8E-52 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 BEN78_13690 46ce060b66dc919d3c3eb986b8a2e41d 410 Gene3D G3DSA:3.30.70.260 327 409 4.8E-29 T 13-10-2018 BEN78_01240 458a0d824be3d1d79575265b3621e6d6 167 Pfam PF00877 NlpC/P60 family 57 164 2.7E-30 T 13-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain BEN78_01240 458a0d824be3d1d79575265b3621e6d6 167 SUPERFAMILY SSF54001 38 166 2.45E-42 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BEN78_01240 458a0d824be3d1d79575265b3621e6d6 167 Gene3D G3DSA:3.90.1720.10 8 162 5.3E-45 T 13-10-2018 BEN78_14820 c1b5d6b83bd4a321793fe5467f44ea6d 358 Gene3D G3DSA:1.10.150.130 19 160 2.6E-15 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal BEN78_14820 c1b5d6b83bd4a321793fe5467f44ea6d 358 Pfam PF00589 Phage integrase family 168 342 5.4E-12 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BEN78_14820 c1b5d6b83bd4a321793fe5467f44ea6d 358 SUPERFAMILY SSF56349 162 354 2.35E-32 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BEN78_14820 c1b5d6b83bd4a321793fe5467f44ea6d 358 Gene3D G3DSA:1.10.443.10 162 344 6.6E-35 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BEN78_14820 c1b5d6b83bd4a321793fe5467f44ea6d 358 SUPERFAMILY SSF47823 28 158 3.37E-12 T 13-10-2018 BEN78_03480 54924c5aaf44be75dd5e409c98f17b56 668 Gene3D G3DSA:3.40.710.10 58 389 5.1E-83 T 13-10-2018 BEN78_03480 54924c5aaf44be75dd5e409c98f17b56 668 Pfam PF00144 Beta-lactamase 70 383 6.6E-65 T 13-10-2018 IPR001466 Beta-lactamase-related BEN78_03480 54924c5aaf44be75dd5e409c98f17b56 668 SUPERFAMILY SSF56601 58 378 2.48E-75 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BEN78_01785 a802ab158d9dc1065abefaf8c801a27d 130 SUPERFAMILY SSF46458 12 121 1.58E-26 T 13-10-2018 IPR009050 Globin-like superfamily BEN78_01785 a802ab158d9dc1065abefaf8c801a27d 130 Pfam PF01152 Bacterial-like globin 15 116 4.9E-5 T 13-10-2018 IPR001486 Truncated hemoglobin GO:0019825 BEN78_01785 a802ab158d9dc1065abefaf8c801a27d 130 Gene3D G3DSA:1.10.490.10 12 127 5.3E-36 T 13-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 BEN78_03395 4d4de41517cf603fd6f19158e65f464a 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 32.756 T 13-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid BEN78_03395 4d4de41517cf603fd6f19158e65f464a 130 SUPERFAMILY SSF54211 6 130 1.29E-47 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BEN78_03395 4d4de41517cf603fd6f19158e65f464a 130 Gene3D G3DSA:3.30.230.10 1 130 2.7E-52 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BEN78_03395 4d4de41517cf603fd6f19158e65f464a 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 2.3E-46 T 13-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 BEN78_03395 4d4de41517cf603fd6f19158e65f464a 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 13-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 BEN78_07280 61b3d386da79a763ea2919bcfa0a34c7 743 Gene3D G3DSA:3.40.718.10 408 649 9.8E-8 T 13-10-2018 BEN78_07280 61b3d386da79a763ea2919bcfa0a34c7 743 PIRSF PIRSF009407 1 742 0.0 T 13-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 BEN78_07280 61b3d386da79a763ea2919bcfa0a34c7 743 SUPERFAMILY SSF53659 4 741 0.0 T 13-10-2018 BEN78_07280 61b3d386da79a763ea2919bcfa0a34c7 743 Pfam PF03971 Monomeric isocitrate dehydrogenase 6 738 0.0 T 13-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 BEN78_07280 61b3d386da79a763ea2919bcfa0a34c7 743 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 3 742 0.0 T 13-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 BEN78_12760 94e7aadc1d2bf6e66cd4fb3905208114 175 Gene3D G3DSA:3.40.30.10 92 175 4.0E-22 T 13-10-2018 BEN78_12760 94e7aadc1d2bf6e66cd4fb3905208114 175 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 26 174 2.1E-57 T 13-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12760 94e7aadc1d2bf6e66cd4fb3905208114 175 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 28 174 1.1E-43 T 13-10-2018 BEN78_12760 94e7aadc1d2bf6e66cd4fb3905208114 175 PIRSF PIRSF000216 2 175 9.1E-51 T 13-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12760 94e7aadc1d2bf6e66cd4fb3905208114 175 SUPERFAMILY SSF52833 20 174 7.38E-45 T 13-10-2018 IPR036249 Thioredoxin-like superfamily BEN78_12760 94e7aadc1d2bf6e66cd4fb3905208114 175 Gene3D G3DSA:1.10.10.1590 17 90 1.6E-20 T 13-10-2018 BEN78_05100 9bae0e5a180fc9225af0960623466478 260 SMART SM00460 159 219 1.6E-15 T 13-10-2018 IPR002931 Transglutaminase-like BEN78_05100 9bae0e5a180fc9225af0960623466478 260 Pfam PF01841 Transglutaminase-like superfamily 118 217 9.6E-24 T 13-10-2018 IPR002931 Transglutaminase-like BEN78_05100 9bae0e5a180fc9225af0960623466478 260 SUPERFAMILY SSF54001 37 249 9.39E-38 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BEN78_05100 9bae0e5a180fc9225af0960623466478 260 Gene3D G3DSA:2.60.40.2250 12 246 6.2E-72 T 13-10-2018 BEN78_05100 9bae0e5a180fc9225af0960623466478 260 Gene3D G3DSA:3.10.620.30 78 239 6.2E-72 T 13-10-2018 BEN78_05100 9bae0e5a180fc9225af0960623466478 260 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 17 75 1.1E-5 T 13-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal BEN78_16110 cde1356a61c2e53a7e9513914eb67090 211 Gene3D G3DSA:1.10.760.10 46 206 5.5E-69 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BEN78_16110 cde1356a61c2e53a7e9513914eb67090 211 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 9 185 4.3E-80 T 13-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO BEN78_16110 cde1356a61c2e53a7e9513914eb67090 211 SUPERFAMILY SSF46626 19 201 6.22E-29 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BEN78_16110 cde1356a61c2e53a7e9513914eb67090 211 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 11 185 1.7E-82 T 13-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO BEN78_08290 c672ce715fa2301eb1efecde5a91f461 496 Pfam PF01593 Flavin containing amine oxidoreductase 15 491 5.4E-41 T 13-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 BEN78_08290 c672ce715fa2301eb1efecde5a91f461 496 SUPERFAMILY SSF51905 1 492 2.46E-75 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_08290 c672ce715fa2301eb1efecde5a91f461 496 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 7 494 2.0E-225 T 13-10-2018 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 BEN78_08290 c672ce715fa2301eb1efecde5a91f461 496 Gene3D G3DSA:3.50.50.60 4 92 1.3E-26 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_08290 c672ce715fa2301eb1efecde5a91f461 496 Gene3D G3DSA:3.50.50.60 198 326 1.1E-24 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_08290 c672ce715fa2301eb1efecde5a91f461 496 Gene3D G3DSA:3.50.50.60 449 496 3.6E-5 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_08290 c672ce715fa2301eb1efecde5a91f461 496 ProSitePatterns PS00982 Bacterial-type phytoene dehydrogenase signature. 462 482 - T 13-10-2018 IPR008150 Phytoene dehydrogenase, bacterial-type, conserved site BEN78_09190 021bceca8fce389c19907092009e5a9d 112 SUPERFAMILY SSF54913 3 103 1.56E-37 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta BEN78_09190 021bceca8fce389c19907092009e5a9d 112 Gene3D G3DSA:3.30.70.120 2 110 2.8E-40 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BEN78_09190 021bceca8fce389c19907092009e5a9d 112 Pfam PF03091 CutA1 divalent ion tolerance protein 6 101 7.9E-37 T 13-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 BEN78_05020 c0aad7bef6103a558713196ca12727f2 395 Gene3D G3DSA:3.40.50.720 8 369 1.8E-141 T 13-10-2018 BEN78_05020 c0aad7bef6103a558713196ca12727f2 395 SUPERFAMILY SSF51735 33 304 8.92E-27 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_05020 c0aad7bef6103a558713196ca12727f2 395 Gene3D G3DSA:3.90.25.40 200 310 1.8E-141 T 13-10-2018 BEN78_05020 c0aad7bef6103a558713196ca12727f2 395 Pfam PF02719 Polysaccharide biosynthesis protein 35 282 1.1E-37 T 13-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain BEN78_03005 8cbcad379f103be7930f1f0aa6dea149 223 Pfam PF00535 Glycosyl transferase family 2 7 74 2.1E-10 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BEN78_03005 8cbcad379f103be7930f1f0aa6dea149 223 SUPERFAMILY SSF53448 7 83 3.46E-16 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_03005 8cbcad379f103be7930f1f0aa6dea149 223 Gene3D G3DSA:3.90.550.10 1 155 4.4E-14 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_14535 0631e82cb8f088850547f9a730e82e75 566 Pfam PF08345 Flagellar M-ring protein C-terminal 264 431 1.5E-47 T 13-10-2018 IPR013556 Flagellar M-ring C-terminal BEN78_14535 0631e82cb8f088850547f9a730e82e75 566 Pfam PF01514 Secretory protein of YscJ/FliF family 41 231 2.9E-66 T 13-10-2018 IPR006182 Secretory protein YscJ/FliF BEN78_14535 0631e82cb8f088850547f9a730e82e75 566 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 20 562 4.8E-87 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BEN78_14535 0631e82cb8f088850547f9a730e82e75 566 Gene3D G3DSA:3.30.300.30 133 233 1.0E-12 T 13-10-2018 BEN78_14535 0631e82cb8f088850547f9a730e82e75 566 PIRSF PIRSF004862 13 565 4.9E-146 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BEN78_14535 0631e82cb8f088850547f9a730e82e75 566 PRINTS PR01009 Flagellar M-ring protein signature 132 150 1.4E-32 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BEN78_14535 0631e82cb8f088850547f9a730e82e75 566 PRINTS PR01009 Flagellar M-ring protein signature 207 225 1.4E-32 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BEN78_14535 0631e82cb8f088850547f9a730e82e75 566 PRINTS PR01009 Flagellar M-ring protein signature 164 178 1.4E-32 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BEN78_14535 0631e82cb8f088850547f9a730e82e75 566 PRINTS PR01009 Flagellar M-ring protein signature 277 295 1.4E-32 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BEN78_14535 0631e82cb8f088850547f9a730e82e75 566 PRINTS PR01009 Flagellar M-ring protein signature 355 379 1.4E-32 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BEN78_03140 f949d3060b998ff89a5b018f05596d03 263 SUPERFAMILY SSF56529 2 251 5.36E-35 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 BEN78_03140 f949d3060b998ff89a5b018f05596d03 263 Gene3D G3DSA:3.90.850.10 1 260 6.9E-50 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 BEN78_14115 a65a378e34de5e537c6105f35fd15681 190 Gene3D G3DSA:3.30.1150.10 79 181 4.2E-27 T 13-10-2018 BEN78_14115 a65a378e34de5e537c6105f35fd15681 190 SUPERFAMILY SSF74653 99 178 1.18E-21 T 13-10-2018 BEN78_14115 a65a378e34de5e537c6105f35fd15681 190 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 104 180 1.3E-23 T 13-10-2018 IPR006260 TonB/TolA, C-terminal BEN78_14115 a65a378e34de5e537c6105f35fd15681 190 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 102 180 2.0E-22 T 13-10-2018 IPR037682 TonB, C-terminal GO:0055085 BEN78_14055 34a7b4ce22ca6e5528900fefd91dce82 87 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 35 68 4.7E-13 T 13-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 BEN78_14055 34a7b4ce22ca6e5528900fefd91dce82 87 PRINTS PR00618 DksA/TraR zinc finger signature 39 50 3.5E-5 T 13-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria BEN78_14055 34a7b4ce22ca6e5528900fefd91dce82 87 PRINTS PR00618 DksA/TraR zinc finger signature 51 63 3.5E-5 T 13-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria BEN78_14055 34a7b4ce22ca6e5528900fefd91dce82 87 Gene3D G3DSA:1.20.120.910 1 72 2.0E-23 T 13-10-2018 BEN78_14055 34a7b4ce22ca6e5528900fefd91dce82 87 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 39 63 - T 13-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site BEN78_14055 34a7b4ce22ca6e5528900fefd91dce82 87 SUPERFAMILY SSF57716 38 69 5.7E-8 T 13-10-2018 BEN78_10705 cf25a658824495040bab29f456c85df5 364 PIRSF PIRSF001455 19 360 6.1E-106 T 13-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 BEN78_10705 cf25a658824495040bab29f456c85df5 364 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 5 361 68.826 T 13-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 BEN78_10705 cf25a658824495040bab29f456c85df5 364 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 16 357 1.0E-113 T 13-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 BEN78_10705 cf25a658824495040bab29f456c85df5 364 SUPERFAMILY SSF56796 10 361 2.75E-108 T 13-10-2018 BEN78_10705 cf25a658824495040bab29f456c85df5 364 Pfam PF01761 3-dehydroquinate synthase 73 330 1.0E-104 T 13-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 BEN78_10705 cf25a658824495040bab29f456c85df5 364 Gene3D G3DSA:1.20.1090.10 178 363 5.6E-64 T 13-10-2018 BEN78_10705 cf25a658824495040bab29f456c85df5 364 Gene3D G3DSA:3.40.50.1970 5 177 1.3E-64 T 13-10-2018 BEN78_09080 4a52d19632e6f1aba7f1bf838c8e7b95 132 Pfam PF10116 Protein required for attachment to host cells 10 131 3.1E-23 T 13-10-2018 IPR019291 Host attachment protein BEN78_04555 15aa9cda2e4fbfa6c3f11612ddb74c60 495 SUPERFAMILY SSF56935 134 495 4.88E-7 T 13-10-2018 BEN78_04555 15aa9cda2e4fbfa6c3f11612ddb74c60 495 Gene3D G3DSA:2.40.160.10 74 495 3.8E-72 T 13-10-2018 IPR023614 Porin domain superfamily BEN78_04555 15aa9cda2e4fbfa6c3f11612ddb74c60 495 Pfam PF07396 Phosphate-selective porin O and P 140 495 3.0E-32 T 13-10-2018 IPR010870 Phosphate-selective porin O/P BEN78_11555 2b65ad854207a5d7ea0ac6782a7e5d4b 453 PIRSF PIRSF006060 7 451 1.5E-72 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BEN78_11555 2b65ad854207a5d7ea0ac6782a7e5d4b 453 Gene3D G3DSA:1.20.1740.10 17 448 9.7E-78 T 13-10-2018 BEN78_11555 2b65ad854207a5d7ea0ac6782a7e5d4b 453 Pfam PF13520 Amino acid permease 23 417 1.5E-51 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BEN78_03300 04b1ce01e1937ce9b6c5d2a3b908d0e2 295 Pfam PF00483 Nucleotidyl transferase 5 241 2.3E-69 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 BEN78_03300 04b1ce01e1937ce9b6c5d2a3b908d0e2 295 SUPERFAMILY SSF53448 4 289 1.71E-90 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_03300 04b1ce01e1937ce9b6c5d2a3b908d0e2 295 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 5 289 1.1E-152 T 13-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 BEN78_03300 04b1ce01e1937ce9b6c5d2a3b908d0e2 295 Gene3D G3DSA:3.90.550.10 1 294 9.2E-85 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_15650 b6806ead53b0edcd8bd70a8dfef9f91d 152 Pfam PF01322 Cytochrome C' 104 151 1.8E-4 T 13-10-2018 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 BEN78_15650 b6806ead53b0edcd8bd70a8dfef9f91d 152 Gene3D G3DSA:1.20.120.10 52 152 2.4E-6 T 13-10-2018 BEN78_15650 b6806ead53b0edcd8bd70a8dfef9f91d 152 SUPERFAMILY SSF47175 55 152 8.24E-11 T 13-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 BEN78_15115 6a61db251a7c7ef6a86559142c0b607d 309 Gene3D G3DSA:1.10.10.60 188 278 1.0E-13 T 13-10-2018 BEN78_15115 6a61db251a7c7ef6a86559142c0b607d 309 SMART SM00342 190 273 8.4E-4 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BEN78_15115 6a61db251a7c7ef6a86559142c0b607d 309 Pfam PF12833 Helix-turn-helix domain 199 274 1.3E-10 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BEN78_15115 6a61db251a7c7ef6a86559142c0b607d 309 SUPERFAMILY SSF46689 227 278 6.72E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN78_03085 3bee014d170735a55c0ac08e50fe23b2 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 6.7E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_03085 3bee014d170735a55c0ac08e50fe23b2 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 6.7E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_03085 3bee014d170735a55c0ac08e50fe23b2 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 6.7E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_03085 3bee014d170735a55c0ac08e50fe23b2 258 SUPERFAMILY SSF51735 9 255 2.69E-79 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_03085 3bee014d170735a55c0ac08e50fe23b2 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 253 4.1E-60 T 13-10-2018 BEN78_03085 3bee014d170735a55c0ac08e50fe23b2 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BEN78_03085 3bee014d170735a55c0ac08e50fe23b2 258 Gene3D G3DSA:3.40.50.720 2 255 3.1E-81 T 13-10-2018 BEN78_03085 3bee014d170735a55c0ac08e50fe23b2 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 6.6E-39 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_03085 3bee014d170735a55c0ac08e50fe23b2 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 6.6E-39 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_03085 3bee014d170735a55c0ac08e50fe23b2 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 6.6E-39 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_03085 3bee014d170735a55c0ac08e50fe23b2 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 6.6E-39 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_03085 3bee014d170735a55c0ac08e50fe23b2 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 6.6E-39 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_03085 3bee014d170735a55c0ac08e50fe23b2 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 6.6E-39 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_07745 e91d3e45c77f397d2f5798a8233a46b7 559 Gene3D G3DSA:3.30.70.270 370 544 1.7E-49 T 13-10-2018 BEN78_07745 e91d3e45c77f397d2f5798a8233a46b7 559 Pfam PF07695 7TM diverse intracellular signalling 169 368 1.1E-20 T 13-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 BEN78_07745 e91d3e45c77f397d2f5798a8233a46b7 559 SMART SM00267 373 544 5.4E-55 T 13-10-2018 IPR000160 GGDEF domain BEN78_07745 e91d3e45c77f397d2f5798a8233a46b7 559 SUPERFAMILY SSF55073 389 543 3.61E-42 T 13-10-2018 IPR029787 Nucleotide cyclase BEN78_07745 e91d3e45c77f397d2f5798a8233a46b7 559 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 382 543 6.3E-41 T 13-10-2018 IPR000160 GGDEF domain BEN78_07745 e91d3e45c77f397d2f5798a8233a46b7 559 Pfam PF00990 Diguanylate cyclase, GGDEF domain 384 540 1.8E-38 T 13-10-2018 IPR000160 GGDEF domain BEN78_00950 b95330433cb2ed6656d30a74dc40a51f 185 Pfam PF01765 Ribosome recycling factor 21 183 1.2E-62 T 13-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 BEN78_00950 b95330433cb2ed6656d30a74dc40a51f 185 Gene3D G3DSA:3.30.1360.40 31 105 2.9E-65 T 13-10-2018 BEN78_00950 b95330433cb2ed6656d30a74dc40a51f 185 Gene3D G3DSA:1.10.132.20 12 182 2.9E-65 T 13-10-2018 BEN78_00950 b95330433cb2ed6656d30a74dc40a51f 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 185 2.7E-70 T 13-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 BEN78_00950 b95330433cb2ed6656d30a74dc40a51f 185 SUPERFAMILY SSF55194 1 185 1.83E-68 T 13-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 BEN78_00950 b95330433cb2ed6656d30a74dc40a51f 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 26.795 T 13-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 BEN78_14910 83378036325d0de9876d0d1fb273ad1b 431 Pfam PF00854 POT family 82 198 5.6E-26 T 13-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 BEN78_14910 83378036325d0de9876d0d1fb273ad1b 431 Pfam PF00854 POT family 222 390 3.5E-18 T 13-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 BEN78_14910 83378036325d0de9876d0d1fb273ad1b 431 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 70 94 - T 13-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 BEN78_14910 83378036325d0de9876d0d1fb273ad1b 431 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 8 197 2.3E-56 T 13-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 BEN78_14910 83378036325d0de9876d0d1fb273ad1b 431 Gene3D G3DSA:1.20.1250.20 1 427 8.3E-103 T 13-10-2018 BEN78_14910 83378036325d0de9876d0d1fb273ad1b 431 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 141 153 - T 13-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 BEN78_14910 83378036325d0de9876d0d1fb273ad1b 431 SUPERFAMILY SSF103473 6 413 7.19E-36 T 13-10-2018 IPR036259 MFS transporter superfamily BEN78_11815 1f665867fdcc0cba6e5700e1ec0396e0 262 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 15 252 2.3E-67 T 13-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 BEN78_11815 1f665867fdcc0cba6e5700e1ec0396e0 262 SUPERFAMILY SSF75217 15 175 2.55E-37 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases BEN78_11815 1f665867fdcc0cba6e5700e1ec0396e0 262 Gene3D G3DSA:3.40.1280.10 14 179 1.1E-62 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BEN78_11815 1f665867fdcc0cba6e5700e1ec0396e0 262 PIRSF PIRSF004808 13 258 2.2E-71 T 13-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 BEN78_11815 1f665867fdcc0cba6e5700e1ec0396e0 262 Pfam PF00588 SpoU rRNA Methylase family 18 168 1.0E-35 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 BEN78_11815 1f665867fdcc0cba6e5700e1ec0396e0 262 Gene3D G3DSA:1.10.8.590 184 260 8.5E-19 T 13-10-2018 BEN78_09485 170b500b6ba2467b891017bdf2bfcf68 318 SUPERFAMILY SSF56042 141 301 5.53E-37 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BEN78_09485 170b500b6ba2467b891017bdf2bfcf68 318 Pfam PF00586 AIR synthase related protein, N-terminal domain 27 136 1.5E-22 T 13-10-2018 IPR016188 PurM-like, N-terminal domain BEN78_09485 170b500b6ba2467b891017bdf2bfcf68 318 Gene3D G3DSA:3.30.1330.10 1 142 8.1E-45 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BEN78_09485 170b500b6ba2467b891017bdf2bfcf68 318 Pfam PF02769 AIR synthase related protein, C-terminal domain 148 297 1.4E-10 T 13-10-2018 IPR010918 PurM-like, C-terminal domain BEN78_09485 170b500b6ba2467b891017bdf2bfcf68 318 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 2 316 27.101 T 13-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 BEN78_09485 170b500b6ba2467b891017bdf2bfcf68 318 Gene3D G3DSA:3.90.650.10 144 317 1.6E-52 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BEN78_09485 170b500b6ba2467b891017bdf2bfcf68 318 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 316 5.0E-104 T 13-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 BEN78_09485 170b500b6ba2467b891017bdf2bfcf68 318 PIRSF PIRSF005303 1 316 9.1E-88 T 13-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 BEN78_09485 170b500b6ba2467b891017bdf2bfcf68 318 SUPERFAMILY SSF55326 4 136 1.06E-31 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BEN78_16785 bf3f3d4d6affc0afb23d4e646575aef8 64 SUPERFAMILY SSF57829 2 55 1.22E-17 T 13-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 BEN78_16785 bf3f3d4d6affc0afb23d4e646575aef8 64 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.549 T 13-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_16785 bf3f3d4d6affc0afb23d4e646575aef8 64 Pfam PF01783 Ribosomal L32p protein family 2 55 2.0E-20 T 13-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_16785 bf3f3d4d6affc0afb23d4e646575aef8 64 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 7.0E-19 T 13-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_11360 23bf2ecaca49142e73300050dc4ed64a 720 SUPERFAMILY SSF50494 52 707 9.59E-23 T 13-10-2018 IPR009003 Peptidase S1, PA clan BEN78_11360 23bf2ecaca49142e73300050dc4ed64a 720 Pfam PF10459 Peptidase S46 23 717 1.2E-236 T 13-10-2018 IPR019500 Peptidase S46 GO:0008239|GO:0070009 BEN78_16470 fbc105c3ebc3ef3e8e4dd7ca7edf4eeb 152 Gene3D G3DSA:1.20.1260.10 1 145 5.5E-32 T 13-10-2018 IPR012347 Ferritin-like BEN78_16470 fbc105c3ebc3ef3e8e4dd7ca7edf4eeb 152 TIGRFAM TIGR02284 TIGR02284: conserved hypothetical protein 7 142 2.1E-50 T 13-10-2018 IPR011971 Conserved hypothetical protein CHP02284 BEN78_16470 fbc105c3ebc3ef3e8e4dd7ca7edf4eeb 152 Pfam PF09537 Domain of unknown function (DUF2383) 6 112 1.4E-32 T 13-10-2018 IPR019052 Domain of unknown function DUF2383 BEN78_16470 fbc105c3ebc3ef3e8e4dd7ca7edf4eeb 152 SUPERFAMILY SSF47240 8 127 1.74E-5 T 13-10-2018 IPR009078 Ferritin-like superfamily BEN78_10540 ba276f9beb3246847168efc5a9e2313e 827 SUPERFAMILY SSF56645 123 359 1.27E-44 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 BEN78_10540 ba276f9beb3246847168efc5a9e2313e 827 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 142 236 6.6E-17 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 BEN78_10540 ba276f9beb3246847168efc5a9e2313e 827 Gene3D G3DSA:1.10.540.10 126 239 5.7E-97 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 BEN78_10540 ba276f9beb3246847168efc5a9e2313e 827 Pfam PF09317 Domain of unknown function (DUF1974) 518 801 3.3E-108 T 13-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 BEN78_10540 ba276f9beb3246847168efc5a9e2313e 827 SUPERFAMILY SSF47203 364 510 1.01E-25 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 BEN78_10540 ba276f9beb3246847168efc5a9e2313e 827 Gene3D G3DSA:2.40.110.10 240 363 5.7E-97 T 13-10-2018 BEN78_10540 ba276f9beb3246847168efc5a9e2313e 827 Gene3D G3DSA:1.20.140.10 364 510 5.7E-97 T 13-10-2018 BEN78_10540 ba276f9beb3246847168efc5a9e2313e 827 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 364 509 6.7E-17 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 BEN78_06025 1e46cb08890843ec2382f58e2d8861a4 141 SUPERFAMILY SSF158634 1 141 8.5E-43 T 13-10-2018 BEN78_06025 1e46cb08890843ec2382f58e2d8861a4 141 Pfam PF12200 Domain of unknown function (DUF3597) 3 136 2.7E-44 T 13-10-2018 IPR022016 Domain of unknown function DUF3597 BEN78_15685 d42dbf13f2b8b009794d141edf40d03d 504 Pfam PF05683 Fumarase C-terminus 288 487 7.5E-80 T 13-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 BEN78_15685 d42dbf13f2b8b009794d141edf40d03d 504 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 11 284 6.5E-61 T 13-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 BEN78_15685 d42dbf13f2b8b009794d141edf40d03d 504 Pfam PF05681 Fumarate hydratase (Fumerase) 10 284 1.7E-98 T 13-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 BEN78_15685 d42dbf13f2b8b009794d141edf40d03d 504 SUPERFAMILY SSF117457 316 486 4.32E-63 T 13-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 BEN78_15685 d42dbf13f2b8b009794d141edf40d03d 504 PIRSF PIRSF001394 1 504 7.0E-219 T 13-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 BEN78_15685 d42dbf13f2b8b009794d141edf40d03d 504 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 324 485 7.8E-49 T 13-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 BEN78_15685 d42dbf13f2b8b009794d141edf40d03d 504 Gene3D G3DSA:3.20.130.10 306 487 2.8E-61 T 13-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 BEN78_11380 7641bd8be27b429cb98ff7e3a80b2af1 326 SUPERFAMILY SSF110997 111 173 2.48E-10 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 BEN78_11380 7641bd8be27b429cb98ff7e3a80b2af1 326 SUPERFAMILY SSF110997 249 322 8.37E-16 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 BEN78_11380 7641bd8be27b429cb98ff7e3a80b2af1 326 Gene3D G3DSA:3.30.70.1070 251 323 4.0E-11 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 BEN78_11380 7641bd8be27b429cb98ff7e3a80b2af1 326 Pfam PF05036 Sporulation related domain 110 175 4.9E-12 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 BEN78_11380 7641bd8be27b429cb98ff7e3a80b2af1 326 Pfam PF05036 Sporulation related domain 250 323 3.0E-17 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 BEN78_10755 f0c787bcfdc05b602342a1a68a037c38 208 Gene3D G3DSA:1.10.287.990 20 89 2.1E-30 T 13-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN78_10755 f0c787bcfdc05b602342a1a68a037c38 208 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 96 201 3.1E-38 T 13-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN78_10755 f0c787bcfdc05b602342a1a68a037c38 208 Gene3D G3DSA:2.40.500.20 90 208 1.1E-45 T 13-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN78_10755 f0c787bcfdc05b602342a1a68a037c38 208 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 89 9.1E-34 T 13-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN78_10755 f0c787bcfdc05b602342a1a68a037c38 208 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.6E-26 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN78_10755 f0c787bcfdc05b602342a1a68a037c38 208 PRINTS PR01703 Manganese superoxide dismutase signature 72 85 1.6E-26 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN78_10755 f0c787bcfdc05b602342a1a68a037c38 208 PRINTS PR01703 Manganese superoxide dismutase signature 125 133 1.6E-26 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN78_10755 f0c787bcfdc05b602342a1a68a037c38 208 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.6E-26 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN78_10755 f0c787bcfdc05b602342a1a68a037c38 208 PRINTS PR01703 Manganese superoxide dismutase signature 166 178 1.6E-26 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN78_10755 f0c787bcfdc05b602342a1a68a037c38 208 SUPERFAMILY SSF46609 1 90 1.7E-37 T 13-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN78_10755 f0c787bcfdc05b602342a1a68a037c38 208 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 168 175 - T 13-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN78_10755 f0c787bcfdc05b602342a1a68a037c38 208 SUPERFAMILY SSF54719 92 206 7.07E-43 T 13-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN78_10755 f0c787bcfdc05b602342a1a68a037c38 208 PIRSF PIRSF000349 1 208 5.1E-81 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN78_10780 fd2b19dff7978000e2654c1158d62ee8 184 Pfam PF02622 Uncharacterized ACR, COG1678 13 171 3.1E-48 T 13-10-2018 IPR003774 Protein of unknown function UPF0301 BEN78_10780 fd2b19dff7978000e2654c1158d62ee8 184 SUPERFAMILY SSF143456 3 183 1.96E-62 T 13-10-2018 BEN78_10780 fd2b19dff7978000e2654c1158d62ee8 184 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 2 184 36.443 T 13-10-2018 IPR003774 Protein of unknown function UPF0301 BEN78_10780 fd2b19dff7978000e2654c1158d62ee8 184 Gene3D G3DSA:3.40.1740.10 1 184 8.6E-66 T 13-10-2018 BEN78_15820 60ec3682b2b587c20d7196d4a5b69ec0 216 Pfam PF00510 Cytochrome c oxidase subunit III 19 213 2.8E-15 T 13-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_15820 60ec3682b2b587c20d7196d4a5b69ec0 216 Gene3D G3DSA:1.20.120.80 31 215 5.0E-54 T 13-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_15820 60ec3682b2b587c20d7196d4a5b69ec0 216 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 37 215 5.8E-79 T 13-10-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 BEN78_15820 60ec3682b2b587c20d7196d4a5b69ec0 216 SUPERFAMILY SSF81452 15 213 2.09E-57 T 13-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_03650 346c2d371d6e3fdc9883945888a644cb 232 SUPERFAMILY SSF110997 117 185 2.79E-8 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 BEN78_03650 346c2d371d6e3fdc9883945888a644cb 232 Pfam PF05036 Sporulation related domain 116 185 2.9E-7 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 BEN78_03650 346c2d371d6e3fdc9883945888a644cb 232 Gene3D G3DSA:3.30.70.1070 120 187 3.2E-6 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 BEN78_15410 8c5289b34f91aa139c3d903a90d59721 236 Pfam PF13489 Methyltransferase domain 49 203 1.7E-26 T 13-10-2018 BEN78_15410 8c5289b34f91aa139c3d903a90d59721 236 Gene3D G3DSA:3.40.50.150 12 235 2.0E-74 T 13-10-2018 BEN78_15410 8c5289b34f91aa139c3d903a90d59721 236 SUPERFAMILY SSF53335 14 233 4.38E-48 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_15410 8c5289b34f91aa139c3d903a90d59721 236 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 12 235 37.003 T 13-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 BEN78_15410 8c5289b34f91aa139c3d903a90d59721 236 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 12 229 6.7E-86 T 13-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 BEN78_11095 da12044f8947ec866367892e4486ace2 99 Gene3D G3DSA:3.30.70.330 1 98 8.7E-34 T 13-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily BEN78_11095 da12044f8947ec866367892e4486ace2 99 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 7 97 22.064 T 13-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 BEN78_11095 da12044f8947ec866367892e4486ace2 99 ProSitePatterns PS00050 Ribosomal protein L23 signature. 80 95 - T 13-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11095 da12044f8947ec866367892e4486ace2 99 SUPERFAMILY SSF54189 2 92 6.83E-29 T 13-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_11095 da12044f8947ec866367892e4486ace2 99 Pfam PF00276 Ribosomal protein L23 8 94 1.3E-29 T 13-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 BEN78_04170 2ea54a848f31d153911836ffe512e579 349 SUPERFAMILY SSF51735 149 312 4.51E-43 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_04170 2ea54a848f31d153911836ffe512e579 349 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 144 3.0E-27 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BEN78_04170 2ea54a848f31d153911836ffe512e579 349 Gene3D G3DSA:3.40.50.720 160 314 9.3E-137 T 13-10-2018 BEN78_04170 2ea54a848f31d153911836ffe512e579 349 SMART SM00829 8 342 5.0E-7 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BEN78_04170 2ea54a848f31d153911836ffe512e579 349 Gene3D G3DSA:3.90.180.10 13 342 9.3E-137 T 13-10-2018 BEN78_04170 2ea54a848f31d153911836ffe512e579 349 SUPERFAMILY SSF50129 9 177 4.57E-52 T 13-10-2018 IPR011032 GroES-like superfamily BEN78_04170 2ea54a848f31d153911836ffe512e579 349 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 13-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 BEN78_04170 2ea54a848f31d153911836ffe512e579 349 Pfam PF00107 Zinc-binding dehydrogenase 186 308 3.4E-23 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BEN78_15865 0af7fae2071da13a839591e1dd172299 475 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 246 253 - T 13-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 BEN78_15865 0af7fae2071da13a839591e1dd172299 475 Gene3D G3DSA:3.40.309.10 251 440 2.7E-173 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BEN78_15865 0af7fae2071da13a839591e1dd172299 475 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 274 285 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 BEN78_15865 0af7fae2071da13a839591e1dd172299 475 Gene3D G3DSA:3.40.605.10 8 468 2.7E-173 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BEN78_15865 0af7fae2071da13a839591e1dd172299 475 Pfam PF00171 Aldehyde dehydrogenase family 18 470 1.6E-162 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BEN78_15865 0af7fae2071da13a839591e1dd172299 475 SUPERFAMILY SSF53720 2 471 5.63E-161 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BEN78_09550 f8970e72be2c50e982a65c1c4a9e37f5 475 SUPERFAMILY SSF53623 107 314 3.4E-54 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BEN78_09550 f8970e72be2c50e982a65c1c4a9e37f5 475 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 466 31.742 T 13-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BEN78_09550 f8970e72be2c50e982a65c1c4a9e37f5 475 Gene3D G3DSA:3.90.190.20 317 470 5.7E-37 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BEN78_09550 f8970e72be2c50e982a65c1c4a9e37f5 475 SUPERFAMILY SSF53244 318 465 1.88E-31 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BEN78_09550 f8970e72be2c50e982a65c1c4a9e37f5 475 SUPERFAMILY SSF63418 1 100 1.44E-17 T 13-10-2018 IPR035911 MurE/MurF, N-terminal BEN78_09550 f8970e72be2c50e982a65c1c4a9e37f5 475 Pfam PF02875 Mur ligase family, glutamate ligase domain 318 389 2.1E-11 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 BEN78_09550 f8970e72be2c50e982a65c1c4a9e37f5 475 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 31 465 2.2E-126 T 13-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BEN78_09550 f8970e72be2c50e982a65c1c4a9e37f5 475 Pfam PF08245 Mur ligase middle domain 111 297 2.1E-43 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 BEN78_09550 f8970e72be2c50e982a65c1c4a9e37f5 475 Pfam PF01225 Mur ligase family, catalytic domain 45 85 1.3E-4 T 13-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 BEN78_09550 f8970e72be2c50e982a65c1c4a9e37f5 475 Gene3D G3DSA:3.40.1390.10 2 86 4.8E-20 T 13-10-2018 BEN78_09550 f8970e72be2c50e982a65c1c4a9e37f5 475 Gene3D G3DSA:3.40.1190.10 87 316 2.4E-73 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BEN78_14050 836bc2d9d8c0bc20952c0dce7ca133da 417 Pfam PF03486 HI0933-like protein 13 406 3.7E-101 T 13-10-2018 BEN78_14050 836bc2d9d8c0bc20952c0dce7ca133da 417 Gene3D G3DSA:2.40.30.10 199 355 7.0E-64 T 13-10-2018 BEN78_14050 836bc2d9d8c0bc20952c0dce7ca133da 417 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 14 406 9.6E-88 T 13-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like BEN78_14050 836bc2d9d8c0bc20952c0dce7ca133da 417 Gene3D G3DSA:1.10.8.260 283 338 7.0E-64 T 13-10-2018 IPR023166 HI0933-like insert domain superfamily BEN78_14050 836bc2d9d8c0bc20952c0dce7ca133da 417 SUPERFAMILY SSF160996 198 310 5.75E-10 T 13-10-2018 BEN78_14050 836bc2d9d8c0bc20952c0dce7ca133da 417 TIGRFAM TIGR03862 flavo_PP4765: flavoprotein, TIGR03862 family 33 414 8.7E-165 T 13-10-2018 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 BEN78_14050 836bc2d9d8c0bc20952c0dce7ca133da 417 Gene3D G3DSA:3.50.50.60 14 405 7.0E-64 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_14050 836bc2d9d8c0bc20952c0dce7ca133da 417 SUPERFAMILY SSF51905 13 413 1.13E-41 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_08635 3c87c873fddff97f5a4638c86d9259e9 258 TIGRFAM TIGR01721 AMN-like: putative AMP nucleosidase 3 256 1.3E-94 T 13-10-2018 IPR010944 AMP nucleosidase, putative BEN78_08635 3c87c873fddff97f5a4638c86d9259e9 258 Pfam PF01048 Phosphorylase superfamily 62 215 3.2E-23 T 13-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 BEN78_08635 3c87c873fddff97f5a4638c86d9259e9 258 Gene3D G3DSA:3.40.50.1580 1 247 2.6E-63 T 13-10-2018 BEN78_08635 3c87c873fddff97f5a4638c86d9259e9 258 SUPERFAMILY SSF53167 6 254 9.16E-61 T 13-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 BEN78_12175 9442e651408152a29cd8bdd2bec3e6fe 457 SUPERFAMILY SSF53067 1 226 2.91E-20 T 13-10-2018 BEN78_12175 9442e651408152a29cd8bdd2bec3e6fe 457 SUPERFAMILY SSF53067 233 451 2.23E-24 T 13-10-2018 BEN78_12175 9442e651408152a29cd8bdd2bec3e6fe 457 Gene3D G3DSA:3.90.640.10 332 389 2.8E-8 T 13-10-2018 BEN78_12175 9442e651408152a29cd8bdd2bec3e6fe 457 Gene3D G3DSA:3.30.420.40 107 231 9.7E-24 T 13-10-2018 BEN78_12175 9442e651408152a29cd8bdd2bec3e6fe 457 Gene3D G3DSA:3.30.420.40 437 447 2.8E-8 T 13-10-2018 BEN78_12175 9442e651408152a29cd8bdd2bec3e6fe 457 Pfam PF00012 Hsp70 protein 148 278 2.4E-10 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BEN78_12175 9442e651408152a29cd8bdd2bec3e6fe 457 Gene3D G3DSA:3.30.420.40 232 269 9.7E-24 T 13-10-2018 BEN78_12175 9442e651408152a29cd8bdd2bec3e6fe 457 Gene3D G3DSA:3.30.420.40 390 436 2.8E-8 T 13-10-2018 BEN78_01280 ac8ad68ff00d8da4a79fc48120602f97 305 PRINTS PR00111 Alpha/beta hydrolase fold signature 130 143 5.4E-6 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN78_01280 ac8ad68ff00d8da4a79fc48120602f97 305 PRINTS PR00111 Alpha/beta hydrolase fold signature 244 258 5.4E-6 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN78_01280 ac8ad68ff00d8da4a79fc48120602f97 305 PRINTS PR00111 Alpha/beta hydrolase fold signature 83 98 5.4E-6 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN78_01280 ac8ad68ff00d8da4a79fc48120602f97 305 SUPERFAMILY SSF53474 35 300 6.73E-48 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_01280 ac8ad68ff00d8da4a79fc48120602f97 305 Pfam PF12697 Alpha/beta hydrolase family 59 292 6.4E-19 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN78_01280 ac8ad68ff00d8da4a79fc48120602f97 305 Gene3D G3DSA:3.40.50.1820 30 301 4.9E-80 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_09965 dc2f65c17ad77e27b3ae11d5d771feb6 305 Pfam PF01882 Protein of unknown function DUF58 53 136 1.3E-19 T 13-10-2018 IPR002881 Domain of unknown function DUF58 BEN78_12250 84975f8880fb2c641b49a8d52ef86950 376 SUPERFAMILY SSF56300 144 373 8.72E-35 T 13-10-2018 BEN78_12250 84975f8880fb2c641b49a8d52ef86950 376 Pfam PF00149 Calcineurin-like phosphoesterase 149 314 6.4E-10 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BEN78_12250 84975f8880fb2c641b49a8d52ef86950 376 Gene3D G3DSA:3.60.21.10 148 336 1.0E-18 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like BEN78_14770 6e4d7585d216db953af1c9abfcd89f09 303 SUPERFAMILY SSF55729 8 150 1.59E-16 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN78_14770 6e4d7585d216db953af1c9abfcd89f09 303 SUPERFAMILY SSF54534 220 294 9.81E-13 T 13-10-2018 BEN78_14770 6e4d7585d216db953af1c9abfcd89f09 303 Gene3D G3DSA:3.10.50.30 215 303 7.0E-23 T 13-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 BEN78_14770 6e4d7585d216db953af1c9abfcd89f09 303 Pfam PF13302 Acetyltransferase (GNAT) domain 9 145 1.2E-12 T 13-10-2018 IPR000182 GNAT domain BEN78_14770 6e4d7585d216db953af1c9abfcd89f09 303 Pfam PF14760 Rnk N-terminus 178 214 2.9E-9 T 13-10-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain BEN78_14770 6e4d7585d216db953af1c9abfcd89f09 303 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 221 292 5.9E-14 T 13-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 BEN78_14770 6e4d7585d216db953af1c9abfcd89f09 303 Gene3D G3DSA:3.40.630.30 5 169 2.0E-19 T 13-10-2018 BEN78_10630 4f77b39e4aa51ad5ab38b5c9468c5cfb 77 SUPERFAMILY SSF52833 6 76 1.79E-12 T 13-10-2018 IPR036249 Thioredoxin-like superfamily BEN78_10630 4f77b39e4aa51ad5ab38b5c9468c5cfb 77 Pfam PF05768 Glutaredoxin-like domain (DUF836) 6 76 5.7E-10 T 13-10-2018 IPR008554 Glutaredoxin-like BEN78_10630 4f77b39e4aa51ad5ab38b5c9468c5cfb 77 Gene3D G3DSA:3.40.30.10 5 77 2.3E-20 T 13-10-2018 BEN78_04970 b8202e31bde479f359485e740a54caf3 715 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 34 699 5.9E-237 T 13-10-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH BEN78_10570 55948df35e8771ba5a0f67bd3f608338 334 Pfam PF00535 Glycosyl transferase family 2 11 170 9.3E-23 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BEN78_10570 55948df35e8771ba5a0f67bd3f608338 334 SUPERFAMILY SSF53448 10 282 2.81E-28 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_10570 55948df35e8771ba5a0f67bd3f608338 334 Gene3D G3DSA:3.90.550.10 3 207 2.6E-26 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_02205 ff8af4ea268a4b9ed5d8ef3364f12682 254 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 244 6.6E-111 T 13-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 BEN78_02205 ff8af4ea268a4b9ed5d8ef3364f12682 254 Pfam PF00005 ABC transporter 17 172 1.4E-22 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_02205 ff8af4ea268a4b9ed5d8ef3364f12682 254 SMART SM00382 26 223 1.6E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_02205 ff8af4ea268a4b9ed5d8ef3364f12682 254 SUPERFAMILY SSF52540 2 232 4.87E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_02205 ff8af4ea268a4b9ed5d8ef3364f12682 254 Gene3D G3DSA:3.40.50.300 1 248 7.2E-62 T 13-10-2018 BEN78_09795 eb740435f770eb07352b176952c327ce 73 TIGRFAM TIGR02449 TIGR02449: TIGR02449 family protein 9 73 3.7E-27 T 13-10-2018 IPR012662 Conserved hypothetical protein CHP02449 BEN78_14505 42e1fc59c098431ac0a72a4ef3c4445d 162 Pfam PF03748 Flagellar basal body-associated protein FliL 60 162 1.2E-24 T 13-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 BEN78_03985 0b84942562293bbb72746693f7388556 405 Pfam PF02687 FtsX-like permease family 312 374 3.3E-6 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BEN78_03535 e968ca4628c5190cbfb33a7a83b1ad2f 368 PIRSF PIRSF009283 9 368 3.2E-123 T 13-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 BEN78_03535 e968ca4628c5190cbfb33a7a83b1ad2f 368 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 26 368 8.3E-114 T 13-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 BEN78_03535 e968ca4628c5190cbfb33a7a83b1ad2f 368 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 18 158 2.6E-56 T 13-10-2018 BEN78_03535 e968ca4628c5190cbfb33a7a83b1ad2f 368 Gene3D G3DSA:3.10.180.10 15 170 2.6E-41 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN78_03535 e968ca4628c5190cbfb33a7a83b1ad2f 368 Gene3D G3DSA:3.10.180.10 171 368 3.6E-67 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN78_03535 e968ca4628c5190cbfb33a7a83b1ad2f 368 SUPERFAMILY SSF54593 13 355 1.88E-73 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN78_03535 e968ca4628c5190cbfb33a7a83b1ad2f 368 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 176 286 6.3E-16 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BEN78_09125 965430fe691184e61b8da3e95ddb94c2 247 Pfam PF01464 Transglycosylase SLT domain 116 213 9.1E-23 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 BEN78_09125 965430fe691184e61b8da3e95ddb94c2 247 Gene3D G3DSA:1.10.530.10 109 244 1.1E-41 T 13-10-2018 BEN78_09125 965430fe691184e61b8da3e95ddb94c2 247 SUPERFAMILY SSF53955 101 236 5.32E-44 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily BEN78_05075 3d08e24ab578e34deb6688e313188c63 279 Gene3D G3DSA:3.40.50.720 1 278 6.2E-91 T 13-10-2018 BEN78_05075 3d08e24ab578e34deb6688e313188c63 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 185 204 6.0E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_05075 3d08e24ab578e34deb6688e313188c63 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 173 6.0E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_05075 3d08e24ab578e34deb6688e313188c63 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 113 124 6.0E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_05075 3d08e24ab578e34deb6688e313188c63 279 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 46 276 5.2E-63 T 13-10-2018 BEN78_05075 3d08e24ab578e34deb6688e313188c63 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 204 3.5E-35 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_05075 3d08e24ab578e34deb6688e313188c63 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 240 260 3.5E-35 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_05075 3d08e24ab578e34deb6688e313188c63 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 38 55 3.5E-35 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_05075 3d08e24ab578e34deb6688e313188c63 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 113 124 3.5E-35 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_05075 3d08e24ab578e34deb6688e313188c63 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 223 3.5E-35 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_05075 3d08e24ab578e34deb6688e313188c63 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 175 3.5E-35 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_05075 3d08e24ab578e34deb6688e313188c63 279 SUPERFAMILY SSF51735 35 277 7.35E-83 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_05075 3d08e24ab578e34deb6688e313188c63 279 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 172 200 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BEN78_11600 6d7afda9743e0ae4af88cc53836e4a3b 170 Pfam PF13211 Protein of unknown function (DUF4019) 61 167 1.1E-23 T 13-10-2018 IPR025091 Protein of unknown function DUF4019 BEN78_00100 81570c7c43d6919bb6c270e463aaa291 125 Pfam PF04250 Protein of unknown function (DUF429) 5 124 2.3E-20 T 13-10-2018 IPR007362 Protein of unknown function DUF429 BEN78_09540 7c15fcb7956674814cc8964c8a005111 609 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 24 577 40.551 T 13-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BEN78_09540 7c15fcb7956674814cc8964c8a005111 609 Gene3D G3DSA:3.90.1310.30 65 238 2.1E-47 T 13-10-2018 BEN78_09540 7c15fcb7956674814cc8964c8a005111 609 Gene3D G3DSA:3.30.450.330 239 566 9.5E-108 T 13-10-2018 BEN78_09540 7c15fcb7956674814cc8964c8a005111 609 Pfam PF03717 Penicillin-binding Protein dimerisation domain 72 222 8.5E-20 T 13-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 BEN78_09540 7c15fcb7956674814cc8964c8a005111 609 Pfam PF00905 Penicillin binding protein transpeptidase domain 263 562 5.1E-75 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BEN78_09540 7c15fcb7956674814cc8964c8a005111 609 Gene3D G3DSA:3.40.710.10 299 480 9.5E-108 T 13-10-2018 BEN78_09540 7c15fcb7956674814cc8964c8a005111 609 SUPERFAMILY SSF56601 190 578 1.44E-93 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BEN78_09540 7c15fcb7956674814cc8964c8a005111 609 SUPERFAMILY SSF56519 68 237 6.54E-46 T 13-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 BEN78_05965 193502a1c8bd1a93b28d6fe5b8343b1a 239 Gene3D G3DSA:1.10.10.10 133 238 1.7E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_05965 193502a1c8bd1a93b28d6fe5b8343b1a 239 Gene3D G3DSA:3.40.50.2300 3 132 3.0E-35 T 13-10-2018 BEN78_05965 193502a1c8bd1a93b28d6fe5b8343b1a 239 Pfam PF00072 Response regulator receiver domain 8 116 4.3E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_05965 193502a1c8bd1a93b28d6fe5b8343b1a 239 SUPERFAMILY SSF46894 134 233 1.39E-21 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BEN78_05965 193502a1c8bd1a93b28d6fe5b8343b1a 239 SUPERFAMILY SSF52172 4 129 1.85E-39 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_05965 193502a1c8bd1a93b28d6fe5b8343b1a 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 232 2.5E-21 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN78_05965 193502a1c8bd1a93b28d6fe5b8343b1a 239 SMART SM00448 6 115 1.4E-38 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_05965 193502a1c8bd1a93b28d6fe5b8343b1a 239 SMART SM00862 155 232 1.3E-23 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN78_11300 5c9e19f1580da6559d5261c42291dd66 161 Gene3D G3DSA:1.10.10.2520 18 96 9.5E-15 T 13-10-2018 BEN78_11300 5c9e19f1580da6559d5261c42291dd66 161 Pfam PF07486 Cell Wall Hydrolase 34 141 1.4E-15 T 13-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 BEN78_06150 55577e45d7add88bca974a4e70ad0682 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 8.6E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06150 55577e45d7add88bca974a4e70ad0682 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 8.6E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06150 55577e45d7add88bca974a4e70ad0682 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 8.6E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06150 55577e45d7add88bca974a4e70ad0682 250 SUPERFAMILY SSF51735 3 225 1.43E-58 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_06150 55577e45d7add88bca974a4e70ad0682 250 Gene3D G3DSA:3.40.50.720 2 234 4.4E-60 T 13-10-2018 BEN78_06150 55577e45d7add88bca974a4e70ad0682 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BEN78_06150 55577e45d7add88bca974a4e70ad0682 250 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 184 0.0038 T 13-10-2018 BEN78_06150 55577e45d7add88bca974a4e70ad0682 250 Pfam PF00106 short chain dehydrogenase 4 187 2.1E-49 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06150 55577e45d7add88bca974a4e70ad0682 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 3.3E-22 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06150 55577e45d7add88bca974a4e70ad0682 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.3E-22 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06150 55577e45d7add88bca974a4e70ad0682 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 3.3E-22 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06150 55577e45d7add88bca974a4e70ad0682 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 3.3E-22 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_06150 55577e45d7add88bca974a4e70ad0682 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 3.3E-22 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_16035 58190738faca95ec9725d3ab3675eb60 121 Pfam PF05433 Glycine zipper 2TM domain 59 100 5.5E-10 T 13-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 BEN78_04600 5b0e2c392cc08c24341f4c6d0f4ce9a6 361 SUPERFAMILY SSF52540 116 334 1.4E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_04600 5b0e2c392cc08c24341f4c6d0f4ce9a6 361 Pfam PF03193 RsgA GTPase 99 272 4.7E-45 T 13-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 BEN78_04600 5b0e2c392cc08c24341f4c6d0f4ce9a6 361 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 83 329 2.3E-43 T 13-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 BEN78_04600 5b0e2c392cc08c24341f4c6d0f4ce9a6 361 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 34 337 30.098 T 13-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 BEN78_04600 5b0e2c392cc08c24341f4c6d0f4ce9a6 361 Gene3D G3DSA:3.40.50.300 101 272 8.2E-44 T 13-10-2018 BEN78_04600 5b0e2c392cc08c24341f4c6d0f4ce9a6 361 Gene3D G3DSA:1.10.40.50 275 346 3.0E-21 T 13-10-2018 BEN78_11795 1471f84b0664757b1e8435cec570188b 112 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 23 104 1.1E-25 T 13-10-2018 IPR003849 Preprotein translocase YajC BEN78_11795 1471f84b0664757b1e8435cec570188b 112 SMART SM01323 22 104 9.8E-42 T 13-10-2018 IPR003849 Preprotein translocase YajC BEN78_11795 1471f84b0664757b1e8435cec570188b 112 PRINTS PR01853 Bacterial YajC preprotein translocase signature 24 44 1.5E-12 T 13-10-2018 IPR003849 Preprotein translocase YajC BEN78_11795 1471f84b0664757b1e8435cec570188b 112 PRINTS PR01853 Bacterial YajC preprotein translocase signature 62 80 1.5E-12 T 13-10-2018 IPR003849 Preprotein translocase YajC BEN78_11795 1471f84b0664757b1e8435cec570188b 112 Pfam PF02699 Preprotein translocase subunit 27 100 2.9E-27 T 13-10-2018 IPR003849 Preprotein translocase YajC BEN78_06525 c6ea57021d7e446b843c113eab662d1a 136 Pfam PF00472 RF-1 domain 6 129 1.3E-21 T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 BEN78_06525 c6ea57021d7e446b843c113eab662d1a 136 SUPERFAMILY SSF110916 6 94 1.83E-13 T 13-10-2018 BEN78_06525 c6ea57021d7e446b843c113eab662d1a 136 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 18 34 - T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 BEN78_06525 c6ea57021d7e446b843c113eab662d1a 136 Gene3D G3DSA:3.30.160.20 2 134 1.2E-38 T 13-10-2018 BEN78_01720 0f0d082a61ff9c403cf2032b93bdee2b 236 SUPERFAMILY SSF54909 1 115 5.18E-46 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel BEN78_01720 0f0d082a61ff9c403cf2032b93bdee2b 236 SUPERFAMILY SSF54909 122 235 2.09E-46 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel BEN78_01720 0f0d082a61ff9c403cf2032b93bdee2b 236 Gene3D G3DSA:3.30.70.100 1 116 6.9E-42 T 13-10-2018 BEN78_01720 0f0d082a61ff9c403cf2032b93bdee2b 236 Gene3D G3DSA:3.30.70.100 117 236 1.2E-42 T 13-10-2018 BEN78_01720 0f0d082a61ff9c403cf2032b93bdee2b 236 Pfam PF07237 Protein of unknown function (DUF1428) 2 102 1.8E-41 T 13-10-2018 IPR009874 Protein of unknown function DUF1428 BEN78_01720 0f0d082a61ff9c403cf2032b93bdee2b 236 Pfam PF07237 Protein of unknown function (DUF1428) 123 222 1.1E-41 T 13-10-2018 IPR009874 Protein of unknown function DUF1428 BEN78_08350 17adbac1d8017ad78363ecda404985da 278 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 1 274 1.0E-92 T 13-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 BEN78_08350 17adbac1d8017ad78363ecda404985da 278 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 3 270 8.8E-60 T 13-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 BEN78_08350 17adbac1d8017ad78363ecda404985da 278 PIRSF PIRSF026649 1 277 7.3E-84 T 13-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 BEN78_05810 b6d60a446c46de11a3220296d1daa71b 827 SUPERFAMILY SSF48168 72 290 7.32E-50 T 13-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN78_05810 b6d60a446c46de11a3220296d1daa71b 827 SUPERFAMILY SSF51998 291 826 1.25E-163 T 13-10-2018 BEN78_05810 b6d60a446c46de11a3220296d1daa71b 827 Pfam PF02867 Ribonucleotide reductase, barrel domain 736 811 5.6E-14 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN78_05810 b6d60a446c46de11a3220296d1daa71b 827 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 212 814 2.0E-168 T 13-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN78_05810 b6d60a446c46de11a3220296d1daa71b 827 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 684 706 - T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN78_05810 b6d60a446c46de11a3220296d1daa71b 827 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 208 288 4.0E-14 T 13-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN78_05810 b6d60a446c46de11a3220296d1daa71b 827 Pfam PF02867 Ribonucleotide reductase, barrel domain 292 733 9.5E-129 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN78_05810 b6d60a446c46de11a3220296d1daa71b 827 Gene3D G3DSA:3.20.70.20 139 820 8.5E-195 T 13-10-2018 BEN78_05810 b6d60a446c46de11a3220296d1daa71b 827 PRINTS PR01183 Ribonucleotide reductase large chain signature 568 591 2.9E-38 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN78_05810 b6d60a446c46de11a3220296d1daa71b 827 PRINTS PR01183 Ribonucleotide reductase large chain signature 634 657 2.9E-38 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN78_05810 b6d60a446c46de11a3220296d1daa71b 827 PRINTS PR01183 Ribonucleotide reductase large chain signature 606 628 2.9E-38 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN78_05810 b6d60a446c46de11a3220296d1daa71b 827 PRINTS PR01183 Ribonucleotide reductase large chain signature 508 519 2.9E-38 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN78_05810 b6d60a446c46de11a3220296d1daa71b 827 PRINTS PR01183 Ribonucleotide reductase large chain signature 367 386 2.9E-38 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN78_05810 b6d60a446c46de11a3220296d1daa71b 827 PRINTS PR01183 Ribonucleotide reductase large chain signature 695 722 2.9E-38 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN78_09630 a9f61f5389eb953da6a36c2ea17437f1 574 Pfam PF00437 Type II/IV secretion system protein 197 464 4.1E-88 T 13-10-2018 IPR001482 Type II/IV secretion system protein BEN78_09630 a9f61f5389eb953da6a36c2ea17437f1 574 SMART SM00382 325 477 0.0053 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_09630 a9f61f5389eb953da6a36c2ea17437f1 574 SUPERFAMILY SSF52540 185 572 2.95E-97 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_09630 a9f61f5389eb953da6a36c2ea17437f1 574 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 392 406 - T 13-10-2018 IPR001482 Type II/IV secretion system protein BEN78_09630 a9f61f5389eb953da6a36c2ea17437f1 574 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 15 574 1.1E-256 T 13-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 BEN78_09630 a9f61f5389eb953da6a36c2ea17437f1 574 Gene3D G3DSA:3.40.50.300 299 574 6.9E-105 T 13-10-2018 BEN78_09630 a9f61f5389eb953da6a36c2ea17437f1 574 Gene3D G3DSA:3.30.300.160 69 149 3.3E-7 T 13-10-2018 BEN78_09630 a9f61f5389eb953da6a36c2ea17437f1 574 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 48 149 4.7E-19 T 13-10-2018 IPR007831 General secretory system II, protein E, N-terminal BEN78_09630 a9f61f5389eb953da6a36c2ea17437f1 574 Gene3D G3DSA:3.30.450.90 166 297 6.5E-48 T 13-10-2018 BEN78_09630 a9f61f5389eb953da6a36c2ea17437f1 574 SUPERFAMILY SSF160246 11 147 3.66E-32 T 13-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily BEN78_07545 0af43fa71311315e7368b4b202f5c2f8 138 Pfam PF03061 Thioesterase superfamily 49 126 1.6E-16 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 BEN78_07545 0af43fa71311315e7368b4b202f5c2f8 138 Gene3D G3DSA:3.10.129.10 1 137 1.6E-55 T 13-10-2018 BEN78_07545 0af43fa71311315e7368b4b202f5c2f8 138 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 19 133 4.3E-39 T 13-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 BEN78_07545 0af43fa71311315e7368b4b202f5c2f8 138 SUPERFAMILY SSF54637 1 136 4.92E-34 T 13-10-2018 IPR029069 HotDog domain superfamily BEN78_05365 6cd98f73b8cfd32dfee4db08fd60033b 259 Gene3D G3DSA:3.90.850.10 2 258 1.1E-73 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 BEN78_05365 6cd98f73b8cfd32dfee4db08fd60033b 259 SUPERFAMILY SSF56529 8 258 6.41E-68 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 BEN78_05365 6cd98f73b8cfd32dfee4db08fd60033b 259 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 101 255 5.4E-6 T 13-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 BEN78_11855 e70216e84b7f2743342d998d06719b5a 701 Pfam PF01431 Peptidase family M13 497 697 2.5E-67 T 13-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BEN78_11855 e70216e84b7f2743342d998d06719b5a 701 Gene3D G3DSA:1.10.1380.10 94 484 4.9E-222 T 13-10-2018 BEN78_11855 e70216e84b7f2743342d998d06719b5a 701 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 528 544 3.9E-21 T 13-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BEN78_11855 e70216e84b7f2743342d998d06719b5a 701 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 507 519 3.9E-21 T 13-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BEN78_11855 e70216e84b7f2743342d998d06719b5a 701 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 489 501 3.9E-21 T 13-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BEN78_11855 e70216e84b7f2743342d998d06719b5a 701 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 599 610 3.9E-21 T 13-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BEN78_11855 e70216e84b7f2743342d998d06719b5a 701 Gene3D G3DSA:3.40.390.10 63 701 4.9E-222 T 13-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 BEN78_11855 e70216e84b7f2743342d998d06719b5a 701 SUPERFAMILY SSF55486 56 701 1.47E-203 T 13-10-2018 BEN78_11855 e70216e84b7f2743342d998d06719b5a 701 Pfam PF05649 Peptidase family M13 69 445 1.1E-92 T 13-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 BEN78_04940 6425dd132ada60da65f006bfd5c263f5 746 Pfam PF13614 AAA domain 557 684 5.3E-11 T 13-10-2018 IPR025669 AAA domain BEN78_04940 6425dd132ada60da65f006bfd5c263f5 746 Pfam PF13807 G-rich domain on putative tyrosine kinase 386 468 7.3E-31 T 13-10-2018 IPR032807 Tyrosine kinase, G-rich domain BEN78_04940 6425dd132ada60da65f006bfd5c263f5 746 Pfam PF02706 Chain length determinant protein 13 104 9.4E-19 T 13-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 BEN78_04940 6425dd132ada60da65f006bfd5c263f5 746 SUPERFAMILY SSF52540 553 735 1.51E-36 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_04940 6425dd132ada60da65f006bfd5c263f5 746 Gene3D G3DSA:3.40.50.300 461 745 1.3E-77 T 13-10-2018 BEN78_04940 6425dd132ada60da65f006bfd5c263f5 746 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 535 739 2.9E-50 T 13-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 BEN78_10070 ed983d6d04f9b85d7e55bb3c99d114be 117 SUPERFAMILY SSF52172 1 116 7.12E-35 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_10070 ed983d6d04f9b85d7e55bb3c99d114be 117 SMART SM00448 1 111 6.4E-36 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_10070 ed983d6d04f9b85d7e55bb3c99d114be 117 Gene3D G3DSA:3.40.50.12740 1 117 1.1E-37 T 13-10-2018 BEN78_10070 ed983d6d04f9b85d7e55bb3c99d114be 117 Pfam PF00072 Response regulator receiver domain 1 112 7.3E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_09275 944b89bc61f79c7a8b3f70ebeda36c57 493 Gene3D G3DSA:3.40.630.10 176 492 2.5E-137 T 13-10-2018 BEN78_09275 944b89bc61f79c7a8b3f70ebeda36c57 493 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 183 483 6.8E-119 T 13-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 BEN78_09275 944b89bc61f79c7a8b3f70ebeda36c57 493 SUPERFAMILY SSF52949 3 181 5.18E-39 T 13-10-2018 BEN78_09275 944b89bc61f79c7a8b3f70ebeda36c57 493 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 344 351 - T 13-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 BEN78_09275 944b89bc61f79c7a8b3f70ebeda36c57 493 Gene3D G3DSA:3.40.220.10 3 164 3.6E-46 T 13-10-2018 BEN78_09275 944b89bc61f79c7a8b3f70ebeda36c57 493 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 21 142 4.1E-29 T 13-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 BEN78_09275 944b89bc61f79c7a8b3f70ebeda36c57 493 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 5 492 35.511 T 13-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 BEN78_09275 944b89bc61f79c7a8b3f70ebeda36c57 493 PRINTS PR00481 Cytosol aminopeptidase signature 368 383 4.0E-50 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BEN78_09275 944b89bc61f79c7a8b3f70ebeda36c57 493 PRINTS PR00481 Cytosol aminopeptidase signature 259 276 4.0E-50 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BEN78_09275 944b89bc61f79c7a8b3f70ebeda36c57 493 PRINTS PR00481 Cytosol aminopeptidase signature 340 360 4.0E-50 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BEN78_09275 944b89bc61f79c7a8b3f70ebeda36c57 493 PRINTS PR00481 Cytosol aminopeptidase signature 318 339 4.0E-50 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BEN78_09275 944b89bc61f79c7a8b3f70ebeda36c57 493 PRINTS PR00481 Cytosol aminopeptidase signature 281 302 4.0E-50 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BEN78_09275 944b89bc61f79c7a8b3f70ebeda36c57 493 SUPERFAMILY SSF53187 176 490 9.42E-119 T 13-10-2018 BEN78_06370 fb7ebc6b712f7cba8683706a04b7b6c0 476 Gene3D G3DSA:3.30.870.10 306 449 1.4E-26 T 13-10-2018 BEN78_06370 fb7ebc6b712f7cba8683706a04b7b6c0 476 Gene3D G3DSA:3.30.870.10 109 299 1.0E-42 T 13-10-2018 BEN78_06370 fb7ebc6b712f7cba8683706a04b7b6c0 476 SMART SM00155 390 417 6.1E-5 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BEN78_06370 fb7ebc6b712f7cba8683706a04b7b6c0 476 SMART SM00155 213 240 0.0012 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BEN78_06370 fb7ebc6b712f7cba8683706a04b7b6c0 476 Pfam PF13091 PLD-like domain 130 239 4.6E-14 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BEN78_06370 fb7ebc6b712f7cba8683706a04b7b6c0 476 Pfam PF13091 PLD-like domain 320 443 4.4E-27 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BEN78_06370 fb7ebc6b712f7cba8683706a04b7b6c0 476 SUPERFAMILY SSF56024 264 453 9.42E-45 T 13-10-2018 BEN78_06370 fb7ebc6b712f7cba8683706a04b7b6c0 476 Pfam PF13396 Phospholipase_D-nuclease N-terminal 32 65 5.6E-6 T 13-10-2018 IPR027379 Cardiolipin synthase N-terminal BEN78_06370 fb7ebc6b712f7cba8683706a04b7b6c0 476 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 16 476 1.7E-119 T 13-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 BEN78_06370 fb7ebc6b712f7cba8683706a04b7b6c0 476 SUPERFAMILY SSF56024 104 307 6.28E-46 T 13-10-2018 BEN78_13695 973fb7114e96391f53b4b139347549c1 462 SUPERFAMILY SSF55103 219 461 2.45E-56 T 13-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 BEN78_13695 973fb7114e96391f53b4b139347549c1 462 Gene3D G3DSA:3.30.43.10 1 92 1.5E-22 T 13-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 BEN78_13695 973fb7114e96391f53b4b139347549c1 462 Gene3D G3DSA:3.30.70.2740 334 419 1.1E-26 T 13-10-2018 BEN78_13695 973fb7114e96391f53b4b139347549c1 462 Gene3D G3DSA:3.30.465.10 94 214 2.5E-40 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 BEN78_13695 973fb7114e96391f53b4b139347549c1 462 Pfam PF01565 FAD binding domain 40 178 3.3E-40 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 BEN78_13695 973fb7114e96391f53b4b139347549c1 462 Gene3D G3DSA:3.30.70.2190 216 331 2.6E-27 T 13-10-2018 BEN78_13695 973fb7114e96391f53b4b139347549c1 462 Pfam PF02913 FAD linked oxidases, C-terminal domain 216 459 1.9E-56 T 13-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 BEN78_13695 973fb7114e96391f53b4b139347549c1 462 SUPERFAMILY SSF56176 4 216 1.82E-66 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BEN78_13695 973fb7114e96391f53b4b139347549c1 462 Gene3D G3DSA:1.10.45.10 420 459 4.4E-15 T 13-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 BEN78_02835 6900c6365d2dd7311ebff5aff36e77e5 146 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 14 132 1.4E-45 T 13-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB BEN78_02835 6900c6365d2dd7311ebff5aff36e77e5 146 SUPERFAMILY SSF48695 18 136 1.35E-40 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily BEN78_02835 6900c6365d2dd7311ebff5aff36e77e5 146 Gene3D G3DSA:1.10.1130.10 51 118 6.8E-28 T 13-10-2018 BEN78_02835 6900c6365d2dd7311ebff5aff36e77e5 146 PIRSF PIRSF006105 6 145 1.3E-50 T 13-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB BEN78_13290 28f3d929cededb01f2419ed507baeefa 651 SMART SM00460 401 472 7.6E-19 T 13-10-2018 IPR002931 Transglutaminase-like BEN78_13290 28f3d929cededb01f2419ed507baeefa 651 Gene3D G3DSA:3.10.620.30 323 490 3.6E-22 T 13-10-2018 BEN78_13290 28f3d929cededb01f2419ed507baeefa 651 Pfam PF11992 Domain of unknown function (DUF3488) 17 327 1.4E-79 T 13-10-2018 IPR021878 Protein of unknown function DUF3488 BEN78_13290 28f3d929cededb01f2419ed507baeefa 651 SUPERFAMILY SSF54001 276 589 4.29E-58 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BEN78_13290 28f3d929cededb01f2419ed507baeefa 651 Pfam PF01841 Transglutaminase-like superfamily 355 470 5.0E-26 T 13-10-2018 IPR002931 Transglutaminase-like BEN78_12705 de756593a0f3ea7fd92bc32da0ee7d53 293 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 203 220 1.4E-37 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN78_12705 de756593a0f3ea7fd92bc32da0ee7d53 293 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 232 243 1.4E-37 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN78_12705 de756593a0f3ea7fd92bc32da0ee7d53 293 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 132 146 1.4E-37 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN78_12705 de756593a0f3ea7fd92bc32da0ee7d53 293 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 166 184 1.4E-37 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN78_12705 de756593a0f3ea7fd92bc32da0ee7d53 293 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 254 263 1.4E-37 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN78_12705 de756593a0f3ea7fd92bc32da0ee7d53 293 SUPERFAMILY SSF52096 28 285 3.5E-87 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BEN78_12705 de756593a0f3ea7fd92bc32da0ee7d53 293 Pfam PF01039 Carboxyl transferase domain 102 242 1.1E-15 T 13-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 BEN78_12705 de756593a0f3ea7fd92bc32da0ee7d53 293 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 285 5.0E-123 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN78_12705 de756593a0f3ea7fd92bc32da0ee7d53 293 Gene3D G3DSA:3.90.226.10 28 290 3.3E-86 T 13-10-2018 BEN78_12705 de756593a0f3ea7fd92bc32da0ee7d53 293 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 284 37.292 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN78_02395 9ee05e247d63adff0d0cdf4bb5455f78 185 Pfam PF11539 Protein of unknown function (DUF3228) 3 183 7.3E-62 T 13-10-2018 IPR021610 Protein of unknown function DUF3228 BEN78_02395 9ee05e247d63adff0d0cdf4bb5455f78 185 Gene3D G3DSA:3.30.2310.50 2 77 1.6E-5 T 13-10-2018 BEN78_02995 524ffb96efca8614d0570ff0a3507a59 158 SMART SM00247 73 151 2.6E-14 T 13-10-2018 IPR001064 Beta/gamma crystallin BEN78_02995 524ffb96efca8614d0570ff0a3507a59 158 Gene3D G3DSA:2.60.20.10 63 152 4.5E-20 T 13-10-2018 BEN78_02995 524ffb96efca8614d0570ff0a3507a59 158 SUPERFAMILY SSF49695 71 151 1.21E-17 T 13-10-2018 IPR011024 Gamma-crystallin-like BEN78_02995 524ffb96efca8614d0570ff0a3507a59 158 Pfam PF00030 Beta/Gamma crystallin 74 151 3.1E-17 T 13-10-2018 IPR001064 Beta/gamma crystallin BEN78_02075 ebc1113417b6d8f94178c364897b6fd4 697 SUPERFAMILY SSF53474 435 695 1.37E-65 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_02075 ebc1113417b6d8f94178c364897b6fd4 697 Gene3D G3DSA:3.40.50.1820 440 697 3.0E-60 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_02075 ebc1113417b6d8f94178c364897b6fd4 697 Pfam PF00326 Prolyl oligopeptidase family 482 696 4.0E-58 T 13-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 BEN78_02075 ebc1113417b6d8f94178c364897b6fd4 697 SUPERFAMILY SSF82171 33 400 6.67E-36 T 13-10-2018 BEN78_02075 ebc1113417b6d8f94178c364897b6fd4 697 Gene3D G3DSA:2.120.10.30 182 439 5.6E-18 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BEN78_02075 ebc1113417b6d8f94178c364897b6fd4 697 Gene3D G3DSA:2.120.10.30 18 176 7.1E-22 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BEN78_02075 ebc1113417b6d8f94178c364897b6fd4 697 Pfam PF07676 WD40-like Beta Propeller Repeat 89 114 2.6E-4 T 13-10-2018 IPR011659 WD40-like Beta Propeller BEN78_02075 ebc1113417b6d8f94178c364897b6fd4 697 Pfam PF07676 WD40-like Beta Propeller Repeat 281 300 0.055 T 13-10-2018 IPR011659 WD40-like Beta Propeller BEN78_04895 9c1d5542e428ffd30f6443ff71580f79 300 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 118 248 8.5E-37 T 13-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_04895 9c1d5542e428ffd30f6443ff71580f79 300 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 20 103 1.3E-14 T 13-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_04895 9c1d5542e428ffd30f6443ff71580f79 300 SUPERFAMILY SSF81464 17 112 2.13E-24 T 13-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_04895 9c1d5542e428ffd30f6443ff71580f79 300 Gene3D G3DSA:1.10.287.90 19 113 4.7E-27 T 13-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_04895 9c1d5542e428ffd30f6443ff71580f79 300 Gene3D G3DSA:2.60.40.420 115 261 3.5E-53 T 13-10-2018 IPR008972 Cupredoxin BEN78_04895 9c1d5542e428ffd30f6443ff71580f79 300 PRINTS PR01166 Cytochrome c oxidase subunit II signature 80 92 1.6E-41 T 13-10-2018 BEN78_04895 9c1d5542e428ffd30f6443ff71580f79 300 PRINTS PR01166 Cytochrome c oxidase subunit II signature 92 112 1.6E-41 T 13-10-2018 BEN78_04895 9c1d5542e428ffd30f6443ff71580f79 300 PRINTS PR01166 Cytochrome c oxidase subunit II signature 114 133 1.6E-41 T 13-10-2018 BEN78_04895 9c1d5542e428ffd30f6443ff71580f79 300 PRINTS PR01166 Cytochrome c oxidase subunit II signature 168 189 1.6E-41 T 13-10-2018 BEN78_04895 9c1d5542e428ffd30f6443ff71580f79 300 PRINTS PR01166 Cytochrome c oxidase subunit II signature 192 212 1.6E-41 T 13-10-2018 BEN78_04895 9c1d5542e428ffd30f6443ff71580f79 300 PRINTS PR01166 Cytochrome c oxidase subunit II signature 212 229 1.6E-41 T 13-10-2018 BEN78_04895 9c1d5542e428ffd30f6443ff71580f79 300 PRINTS PR01166 Cytochrome c oxidase subunit II signature 230 247 1.6E-41 T 13-10-2018 BEN78_04895 9c1d5542e428ffd30f6443ff71580f79 300 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 193 241 - T 13-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_04895 9c1d5542e428ffd30f6443ff71580f79 300 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 36 257 2.9E-59 T 13-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_04895 9c1d5542e428ffd30f6443ff71580f79 300 SUPERFAMILY SSF49503 116 264 3.9E-52 T 13-10-2018 IPR008972 Cupredoxin BEN78_05865 4b904a85cd4761b8d9e97d5146d2d213 566 Gene3D G3DSA:3.40.50.1820 100 238 9.5E-7 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_05865 4b904a85cd4761b8d9e97d5146d2d213 566 SUPERFAMILY SSF53474 127 267 2.36E-14 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_05865 4b904a85cd4761b8d9e97d5146d2d213 566 Pfam PF11187 Protein of unknown function (DUF2974) 128 217 2.5E-7 T 13-10-2018 IPR024499 Protein of unknown function DUF2974 BEN78_11960 b4b49caa4e792396a194cd20e04fbcf0 294 ProSitePatterns PS00194 Thioredoxin family active site. 38 56 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 BEN78_11960 b4b49caa4e792396a194cd20e04fbcf0 294 Gene3D G3DSA:3.40.30.10 15 121 5.5E-32 T 13-10-2018 BEN78_11960 b4b49caa4e792396a194cd20e04fbcf0 294 PRINTS PR00421 Thioredoxin family signature 85 96 1.2E-5 T 13-10-2018 BEN78_11960 b4b49caa4e792396a194cd20e04fbcf0 294 PRINTS PR00421 Thioredoxin family signature 45 54 1.2E-5 T 13-10-2018 BEN78_11960 b4b49caa4e792396a194cd20e04fbcf0 294 PRINTS PR00421 Thioredoxin family signature 37 45 1.2E-5 T 13-10-2018 BEN78_11960 b4b49caa4e792396a194cd20e04fbcf0 294 Pfam PF14561 Tetratricopeptide repeat 208 294 1.7E-20 T 13-10-2018 BEN78_11960 b4b49caa4e792396a194cd20e04fbcf0 294 Pfam PF00085 Thioredoxin 17 120 9.1E-28 T 13-10-2018 IPR013766 Thioredoxin domain GO:0045454 BEN78_11960 b4b49caa4e792396a194cd20e04fbcf0 294 SUPERFAMILY SSF52833 6 120 3.28E-36 T 13-10-2018 IPR036249 Thioredoxin-like superfamily BEN78_11960 b4b49caa4e792396a194cd20e04fbcf0 294 TIGRFAM TIGR01068 thioredoxin: thioredoxin 21 119 1.5E-30 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 BEN78_11960 b4b49caa4e792396a194cd20e04fbcf0 294 Gene3D G3DSA:1.25.40.10 208 294 6.3E-19 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_10210 3884020db2d35b76162a2c7bcc69de4d 296 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 23 279 2.2E-69 T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 BEN78_10210 3884020db2d35b76162a2c7bcc69de4d 296 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 16 278 2.5E-67 T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 BEN78_10210 3884020db2d35b76162a2c7bcc69de4d 296 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 144 156 - T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 BEN78_10210 3884020db2d35b76162a2c7bcc69de4d 296 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 285 18.435 T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 BEN78_01960 f34e6889284f5e68d6bcbac71db392f0 206 Pfam PF00043 Glutathione S-transferase, C-terminal domain 96 188 9.2E-8 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal BEN78_01960 f34e6889284f5e68d6bcbac71db392f0 206 Gene3D G3DSA:3.40.30.10 5 195 1.7E-67 T 13-10-2018 BEN78_01960 f34e6889284f5e68d6bcbac71db392f0 206 Gene3D G3DSA:1.20.1050.10 83 187 1.7E-67 T 13-10-2018 BEN78_01960 f34e6889284f5e68d6bcbac71db392f0 206 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 75 2.1E-10 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 BEN78_01960 f34e6889284f5e68d6bcbac71db392f0 206 SUPERFAMILY SSF47616 76 202 2.56E-22 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BEN78_01960 f34e6889284f5e68d6bcbac71db392f0 206 SUPERFAMILY SSF52833 5 105 2.09E-19 T 13-10-2018 IPR036249 Thioredoxin-like superfamily BEN78_08520 17d92eb9f1ae865b5bc694a2378eb1f3 120 Pfam PF04972 BON domain 46 114 4.0E-20 T 13-10-2018 IPR007055 BON domain BEN78_08520 17d92eb9f1ae865b5bc694a2378eb1f3 120 SMART SM00749 51 114 1.7E-6 T 13-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria BEN78_14180 3c2be1c3545bc68edc46d0f5b4e3932d 88 Pfam PF03658 RnfH family Ubiquitin 1 79 7.6E-14 T 13-10-2018 IPR005346 RnfH protein BEN78_14180 3c2be1c3545bc68edc46d0f5b4e3932d 88 Gene3D G3DSA:3.10.20.280 1 81 3.2E-14 T 13-10-2018 IPR037021 RnfH superfamily BEN78_14180 3c2be1c3545bc68edc46d0f5b4e3932d 88 Hamap MF_00460 Protein RnfH [rnfH]. 1 87 15.319 T 13-10-2018 IPR005346 RnfH protein BEN78_14180 3c2be1c3545bc68edc46d0f5b4e3932d 88 SUPERFAMILY SSF54285 1 70 1.05E-8 T 13-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp BEN78_04755 aa17b90d3cf44cff715ddc8db3854d66 387 SUPERFAMILY SSF53448 48 284 4.66E-19 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_04755 aa17b90d3cf44cff715ddc8db3854d66 387 Pfam PF13506 Glycosyl transferase family 21 105 275 3.6E-30 T 13-10-2018 IPR025993 Ceramide glucosyltransferase GO:0016757 KEGG: 00600+2.4.1.80|MetaCyc: PWY-5129|MetaCyc: PWY-7836|MetaCyc: PWY-7838|MetaCyc: PWY-7839|MetaCyc: PWY-7841|Reactome: R-HSA-1660662 BEN78_04755 aa17b90d3cf44cff715ddc8db3854d66 387 Gene3D G3DSA:3.90.550.10 37 254 2.0E-7 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_08600 2d14ebfab4c881e80a1ee5984199a259 119 ProSitePatterns PS00018 EF-hand calcium-binding domain. 101 113 - T 13-10-2018 IPR018247 EF-Hand 1, calcium-binding site BEN78_08600 2d14ebfab4c881e80a1ee5984199a259 119 Gene3D G3DSA:1.10.238.10 15 58 5.4E-5 T 13-10-2018 BEN78_08600 2d14ebfab4c881e80a1ee5984199a259 119 ProSitePatterns PS00018 EF-hand calcium-binding domain. 40 52 - T 13-10-2018 IPR018247 EF-Hand 1, calcium-binding site BEN78_08600 2d14ebfab4c881e80a1ee5984199a259 119 Gene3D G3DSA:1.10.238.10 59 116 9.0E-9 T 13-10-2018 BEN78_08600 2d14ebfab4c881e80a1ee5984199a259 119 Pfam PF13202 EF hand 93 114 0.0031 T 13-10-2018 IPR002048 EF-hand domain GO:0005509 BEN78_08600 2d14ebfab4c881e80a1ee5984199a259 119 Pfam PF13202 EF hand 59 76 4.6E-5 T 13-10-2018 IPR002048 EF-hand domain GO:0005509 BEN78_08600 2d14ebfab4c881e80a1ee5984199a259 119 Pfam PF13202 EF hand 35 54 1.6E-4 T 13-10-2018 IPR002048 EF-hand domain GO:0005509 BEN78_08600 2d14ebfab4c881e80a1ee5984199a259 119 SUPERFAMILY SSF47473 28 114 2.99E-14 T 13-10-2018 IPR011992 EF-hand domain pair BEN78_16415 99449ba1942942da58f952642af1737a 519 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 51 164 2.9E-14 T 13-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 BEN78_16415 99449ba1942942da58f952642af1737a 519 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 364 371 - T 13-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 BEN78_16415 99449ba1942942da58f952642af1737a 519 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 202 508 1.0E-112 T 13-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 BEN78_16415 99449ba1942942da58f952642af1737a 519 SUPERFAMILY SSF52949 31 182 3.41E-16 T 13-10-2018 BEN78_16415 99449ba1942942da58f952642af1737a 519 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 27 518 31.937 T 13-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 BEN78_16415 99449ba1942942da58f952642af1737a 519 Gene3D G3DSA:3.40.630.10 185 518 5.7E-120 T 13-10-2018 BEN78_16415 99449ba1942942da58f952642af1737a 519 PRINTS PR00481 Cytosol aminopeptidase signature 389 404 1.4E-47 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BEN78_16415 99449ba1942942da58f952642af1737a 519 PRINTS PR00481 Cytosol aminopeptidase signature 279 296 1.4E-47 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BEN78_16415 99449ba1942942da58f952642af1737a 519 PRINTS PR00481 Cytosol aminopeptidase signature 338 359 1.4E-47 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BEN78_16415 99449ba1942942da58f952642af1737a 519 PRINTS PR00481 Cytosol aminopeptidase signature 360 380 1.4E-47 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BEN78_16415 99449ba1942942da58f952642af1737a 519 PRINTS PR00481 Cytosol aminopeptidase signature 301 322 1.4E-47 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BEN78_16415 99449ba1942942da58f952642af1737a 519 SUPERFAMILY SSF53187 195 515 1.38E-106 T 13-10-2018 BEN78_16415 99449ba1942942da58f952642af1737a 519 Gene3D G3DSA:3.40.220.10 28 175 3.4E-20 T 13-10-2018 BEN78_09865 e612ea2c017962bb2f4d6d9a9331e385 205 SMART SM00072 2 184 2.7E-59 T 13-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit BEN78_09865 e612ea2c017962bb2f4d6d9a9331e385 205 Gene3D G3DSA:3.40.50.300 7 180 3.1E-65 T 13-10-2018 BEN78_09865 e612ea2c017962bb2f4d6d9a9331e385 205 SUPERFAMILY SSF52540 2 186 1.67E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_09865 e612ea2c017962bb2f4d6d9a9331e385 205 Gene3D G3DSA:3.30.63.10 34 93 3.1E-65 T 13-10-2018 BEN78_09865 e612ea2c017962bb2f4d6d9a9331e385 205 ProSitePatterns PS00856 Guanylate kinase-like signature. 37 54 - T 13-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 BEN78_09865 e612ea2c017962bb2f4d6d9a9331e385 205 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 3 181 5.5E-71 T 13-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 BEN78_09865 e612ea2c017962bb2f4d6d9a9331e385 205 Pfam PF00625 Guanylate kinase 4 181 3.1E-48 T 13-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit BEN78_09865 e612ea2c017962bb2f4d6d9a9331e385 205 Hamap MF_00328 Guanylate kinase [gmk]. 1 184 35.639 T 13-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 BEN78_14495 70af3af5017fb6389bf78d8f65cd9d7b 114 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 35 104 6.8E-26 T 13-10-2018 IPR001543 Surface presentation of antigen (SpoA) BEN78_14495 70af3af5017fb6389bf78d8f65cd9d7b 114 Gene3D G3DSA:2.30.330.10 21 114 4.4E-35 T 13-10-2018 IPR036429 SpoA-like superfamily BEN78_14495 70af3af5017fb6389bf78d8f65cd9d7b 114 SUPERFAMILY SSF101801 31 112 8.76E-26 T 13-10-2018 IPR036429 SpoA-like superfamily BEN78_14495 70af3af5017fb6389bf78d8f65cd9d7b 114 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 31 106 2.5E-34 T 13-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 BEN78_14495 70af3af5017fb6389bf78d8f65cd9d7b 114 PRINTS PR00956 Flagellar motor switch protein FliN signature 34 50 1.1E-26 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 BEN78_14495 70af3af5017fb6389bf78d8f65cd9d7b 114 PRINTS PR00956 Flagellar motor switch protein FliN signature 51 67 1.1E-26 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 BEN78_14495 70af3af5017fb6389bf78d8f65cd9d7b 114 PRINTS PR00956 Flagellar motor switch protein FliN signature 67 80 1.1E-26 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 BEN78_14495 70af3af5017fb6389bf78d8f65cd9d7b 114 PRINTS PR00956 Flagellar motor switch protein FliN signature 80 95 1.1E-26 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 BEN78_16070 fc0d1793c9f391ecb35026e4e23da9fe 318 Pfam PF13410 Glutathione S-transferase, C-terminal domain 202 275 7.6E-13 T 13-10-2018 BEN78_16070 fc0d1793c9f391ecb35026e4e23da9fe 318 SUPERFAMILY SSF47616 170 314 1.39E-33 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BEN78_16070 fc0d1793c9f391ecb35026e4e23da9fe 318 Pfam PF13409 Glutathione S-transferase, N-terminal domain 62 157 1.1E-19 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 BEN78_16070 fc0d1793c9f391ecb35026e4e23da9fe 318 Gene3D G3DSA:3.40.30.130 1 179 1.0E-66 T 13-10-2018 BEN78_16070 fc0d1793c9f391ecb35026e4e23da9fe 318 SUPERFAMILY SSF52833 41 162 1.56E-13 T 13-10-2018 IPR036249 Thioredoxin-like superfamily BEN78_16070 fc0d1793c9f391ecb35026e4e23da9fe 318 PIRSF PIRSF015753 7 317 1.4E-123 T 13-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 BEN78_16070 fc0d1793c9f391ecb35026e4e23da9fe 318 Gene3D G3DSA:1.20.1050.10 180 317 2.7E-64 T 13-10-2018 BEN78_02580 a0e2fe26ee3b1646775e3afb0c443cd3 174 SUPERFAMILY SSF56524 59 172 8.24E-13 T 13-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 BEN78_02580 a0e2fe26ee3b1646775e3afb0c443cd3 174 Gene3D G3DSA:3.90.420.10 67 174 2.0E-7 T 13-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 BEN78_02580 a0e2fe26ee3b1646775e3afb0c443cd3 174 Pfam PF00174 Oxidoreductase molybdopterin binding domain 75 172 2.3E-6 T 13-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 BEN78_12290 e3d51dca300582a253377c0a00f1a9d1 433 Gene3D G3DSA:2.40.160.10 55 433 3.3E-93 T 13-10-2018 IPR023614 Porin domain superfamily BEN78_12290 e3d51dca300582a253377c0a00f1a9d1 433 Pfam PF07396 Phosphate-selective porin O and P 93 433 2.1E-47 T 13-10-2018 IPR010870 Phosphate-selective porin O/P BEN78_12290 e3d51dca300582a253377c0a00f1a9d1 433 SUPERFAMILY SSF56935 86 419 6.78E-16 T 13-10-2018 BEN78_02595 44589391227cc6854e8d07d089d617c6 221 Gene3D G3DSA:3.40.50.300 4 218 1.7E-52 T 13-10-2018 BEN78_02595 44589391227cc6854e8d07d089d617c6 221 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN78_02595 44589391227cc6854e8d07d089d617c6 221 SUPERFAMILY SSF52540 6 214 4.08E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_02595 44589391227cc6854e8d07d089d617c6 221 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 3 209 5.3E-89 T 13-10-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 BEN78_02595 44589391227cc6854e8d07d089d617c6 221 SMART SM00382 23 207 2.4E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_02595 44589391227cc6854e8d07d089d617c6 221 Pfam PF00005 ABC transporter 25 157 5.0E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_08540 1b95c4cdf0d7745fac358a4e1d896f4f 625 Pfam PF13667 ThiC-associated domain 22 99 8.1E-30 T 13-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 BEN78_08540 1b95c4cdf0d7745fac358a4e1d896f4f 625 Pfam PF01964 Radical SAM ThiC family 139 586 2.3E-200 T 13-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 BEN78_08540 1b95c4cdf0d7745fac358a4e1d896f4f 625 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 138 591 100.344 T 13-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 BEN78_08540 1b95c4cdf0d7745fac358a4e1d896f4f 625 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 138 590 2.8E-214 T 13-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 BEN78_08540 1b95c4cdf0d7745fac358a4e1d896f4f 625 Gene3D G3DSA:3.20.20.540 210 522 1.3E-153 T 13-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 BEN78_14285 b9759bff77594964f9570bb69a77fdc3 559 Pfam PF00501 AMP-binding enzyme 32 463 2.1E-109 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BEN78_14285 b9759bff77594964f9570bb69a77fdc3 559 Gene3D G3DSA:3.30.300.310 459 558 5.4E-30 T 13-10-2018 BEN78_14285 b9759bff77594964f9570bb69a77fdc3 559 ProSitePatterns PS00455 Putative AMP-binding domain signature. 213 224 - T 13-10-2018 IPR020845 AMP-binding, conserved site BEN78_14285 b9759bff77594964f9570bb69a77fdc3 559 SUPERFAMILY SSF56801 20 556 3.01E-149 T 13-10-2018 BEN78_14285 b9759bff77594964f9570bb69a77fdc3 559 Pfam PF13193 AMP-binding enzyme C-terminal domain 472 546 2.9E-17 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BEN78_14285 b9759bff77594964f9570bb69a77fdc3 559 Gene3D G3DSA:3.40.50.12780 15 454 3.2E-115 T 13-10-2018 BEN78_06175 deb05f3f163a4563db383934893bff7f 229 Pfam PF03591 AzlC protein 15 151 6.0E-31 T 13-10-2018 IPR011606 Branched-chain amino acid transport, permease BEN78_10670 20065616a7dc643a0dbdccb77692344d 210 Pfam PF07290 Protein of unknown function (DUF1449) 18 192 1.3E-6 T 13-10-2018 IPR010840 Protein of unknown function DUF1449 BEN78_07720 89d73933af242bb905a212cf8f09c766 331 Pfam PF00248 Aldo/keto reductase family 16 310 2.2E-76 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain BEN78_07720 89d73933af242bb905a212cf8f09c766 331 Gene3D G3DSA:3.20.20.100 1 329 2.3E-121 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BEN78_07720 89d73933af242bb905a212cf8f09c766 331 SUPERFAMILY SSF51430 1 312 1.14E-103 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BEN78_04280 e689b247796b5f4a788aa1e388bc8c28 373 SMART SM00244 142 301 7.5E-19 T 13-10-2018 IPR001107 Band 7 domain BEN78_04280 e689b247796b5f4a788aa1e388bc8c28 373 Gene3D G3DSA:3.30.479.30 179 303 1.3E-22 T 13-10-2018 BEN78_04280 e689b247796b5f4a788aa1e388bc8c28 373 Pfam PF01145 SPFH domain / Band 7 family 147 318 4.4E-23 T 13-10-2018 IPR001107 Band 7 domain BEN78_04280 e689b247796b5f4a788aa1e388bc8c28 373 SUPERFAMILY SSF117892 182 307 6.93E-26 T 13-10-2018 IPR036013 Band 7/SPFH domain superfamily BEN78_10365 537fa4f1d8aab417945479dc68c70a6d 279 SUPERFAMILY SSF53335 16 274 1.22E-60 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_10365 537fa4f1d8aab417945479dc68c70a6d 279 Pfam PF05175 Methyltransferase small domain 102 190 4.9E-16 T 13-10-2018 IPR007848 Methyltransferase small domain GO:0008168 BEN78_10365 537fa4f1d8aab417945479dc68c70a6d 279 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 181 187 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BEN78_10365 537fa4f1d8aab417945479dc68c70a6d 279 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 11 275 2.2E-70 T 13-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 BEN78_10365 537fa4f1d8aab417945479dc68c70a6d 279 Gene3D G3DSA:1.10.8.10 6 84 8.0E-23 T 13-10-2018 BEN78_10365 537fa4f1d8aab417945479dc68c70a6d 279 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 8 276 44.49 T 13-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 BEN78_10365 537fa4f1d8aab417945479dc68c70a6d 279 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 23 272 6.4E-90 T 13-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 BEN78_10365 537fa4f1d8aab417945479dc68c70a6d 279 Gene3D G3DSA:3.40.50.150 85 276 1.2E-59 T 13-10-2018 BEN78_02275 d3f2503bcc63d7384132fef4062038d3 365 SUPERFAMILY SSF103025 3 276 3.77E-90 T 13-10-2018 BEN78_02275 d3f2503bcc63d7384132fef4062038d3 365 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 358 43.35 T 13-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 BEN78_02275 d3f2503bcc63d7384132fef4062038d3 365 Gene3D G3DSA:2.40.30.110 281 365 8.8E-29 T 13-10-2018 BEN78_02275 d3f2503bcc63d7384132fef4062038d3 365 Gene3D G3DSA:3.30.70.1400 51 138 5.1E-83 T 13-10-2018 BEN78_02275 d3f2503bcc63d7384132fef4062038d3 365 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 3 358 4.6E-121 T 13-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 BEN78_02275 d3f2503bcc63d7384132fef4062038d3 365 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 259 9.3E-88 T 13-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain BEN78_02275 d3f2503bcc63d7384132fef4062038d3 365 Gene3D G3DSA:3.30.1360.120 7 236 5.1E-83 T 13-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 BEN78_02275 d3f2503bcc63d7384132fef4062038d3 365 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 267 352 7.5E-15 T 13-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 BEN78_02275 d3f2503bcc63d7384132fef4062038d3 365 Gene3D G3DSA:4.10.1250.10 237 279 4.9E-17 T 13-10-2018 BEN78_02275 d3f2503bcc63d7384132fef4062038d3 365 PIRSF PIRSF006487 1 362 1.3E-83 T 13-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 BEN78_02275 d3f2503bcc63d7384132fef4062038d3 365 SUPERFAMILY SSF101790 273 359 2.94E-22 T 13-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal BEN78_05360 123e7bd058e1d442534bce3396185c4c 314 Pfam PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation 130 281 5.5E-61 T 13-10-2018 IPR015426 Acetaldehyde dehydrogenase, C-terminal GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 BEN78_05360 123e7bd058e1d442534bce3396185c4c 314 SMART SM00859 4 122 6.2E-8 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 BEN78_05360 123e7bd058e1d442534bce3396185c4c 314 Hamap MF_01657 Acetaldehyde dehydrogenase [mhpF]. 1 314 139.387 T 13-10-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 BEN78_05360 123e7bd058e1d442534bce3396185c4c 314 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 119 4.1E-9 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 BEN78_05360 123e7bd058e1d442534bce3396185c4c 314 SUPERFAMILY SSF55347 130 281 6.41E-62 T 13-10-2018 BEN78_05360 123e7bd058e1d442534bce3396185c4c 314 PIRSF PIRSF015689 1 311 6.7E-127 T 13-10-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 BEN78_05360 123e7bd058e1d442534bce3396185c4c 314 SUPERFAMILY SSF51735 1 154 6.22E-24 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_05360 123e7bd058e1d442534bce3396185c4c 314 Gene3D G3DSA:3.40.50.720 3 302 1.9E-125 T 13-10-2018 BEN78_05360 123e7bd058e1d442534bce3396185c4c 314 Gene3D G3DSA:3.30.360.10 130 295 1.9E-125 T 13-10-2018 BEN78_05360 123e7bd058e1d442534bce3396185c4c 314 TIGRFAM TIGR03215 ac_ald_DH_ac: acetaldehyde dehydrogenase (acetylating) 3 305 3.8E-136 T 13-10-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 BEN78_14625 e4da7e00242a62879252d937d090d2f7 249 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 172 244 1.6E-19 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BEN78_14625 e4da7e00242a62879252d937d090d2f7 249 SUPERFAMILY SSF117143 78 185 1.12E-11 T 13-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like BEN78_14625 e4da7e00242a62879252d937d090d2f7 249 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 121 2.0E-30 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BEN78_14625 e4da7e00242a62879252d937d090d2f7 249 Pfam PF00460 Flagella basal body rod protein 5 35 2.7E-7 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BEN78_06990 4584f7431adbb00251c1a571f655d153 96 Gene3D G3DSA:3.30.750.24 4 95 3.2E-5 T 13-10-2018 IPR036513 STAS domain superfamily BEN78_06990 4584f7431adbb00251c1a571f655d153 96 SUPERFAMILY SSF52091 9 90 1.92E-7 T 13-10-2018 IPR036513 STAS domain superfamily BEN78_06990 4584f7431adbb00251c1a571f655d153 96 Pfam PF13466 STAS domain 16 87 4.8E-11 T 13-10-2018 IPR002645 STAS domain BEN78_15020 edc1013f9280d4a2456c6c1126c96387 262 Gene3D G3DSA:3.90.226.10 3 203 2.7E-63 T 13-10-2018 BEN78_15020 edc1013f9280d4a2456c6c1126c96387 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 253 2.6E-47 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 BEN78_15020 edc1013f9280d4a2456c6c1126c96387 262 SUPERFAMILY SSF52096 3 259 1.9E-68 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BEN78_15020 edc1013f9280d4a2456c6c1126c96387 262 Gene3D G3DSA:1.10.12.10 205 260 4.8E-11 T 13-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal BEN78_01915 1affff52477e92b798bb1e6c98a99239 356 SUPERFAMILY SSF81345 21 349 3.53E-83 T 13-10-2018 IPR037294 ABC transporter, BtuC-like BEN78_01915 1affff52477e92b798bb1e6c98a99239 356 Pfam PF01032 FecCD transport family 30 349 5.9E-93 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 BEN78_01915 1affff52477e92b798bb1e6c98a99239 356 Gene3D G3DSA:1.10.3470.10 20 355 1.5E-103 T 13-10-2018 IPR037294 ABC transporter, BtuC-like BEN78_01875 1b20ba11a706ebca9235e69f0f304d3f 548 SUPERFAMILY SSF56801 13 539 5.49E-134 T 13-10-2018 BEN78_01875 1b20ba11a706ebca9235e69f0f304d3f 548 Gene3D G3DSA:2.30.38.10 363 438 1.2E-27 T 13-10-2018 BEN78_01875 1b20ba11a706ebca9235e69f0f304d3f 548 Gene3D G3DSA:3.30.300.310 440 542 5.3E-30 T 13-10-2018 BEN78_01875 1b20ba11a706ebca9235e69f0f304d3f 548 Pfam PF13193 AMP-binding enzyme C-terminal domain 453 528 6.3E-16 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BEN78_01875 1b20ba11a706ebca9235e69f0f304d3f 548 Gene3D G3DSA:3.40.50.980 190 362 2.1E-56 T 13-10-2018 BEN78_01875 1b20ba11a706ebca9235e69f0f304d3f 548 Pfam PF00501 AMP-binding enzyme 40 443 9.3E-80 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BEN78_01875 1b20ba11a706ebca9235e69f0f304d3f 548 ProSitePatterns PS00455 Putative AMP-binding domain signature. 196 207 - T 13-10-2018 IPR020845 AMP-binding, conserved site BEN78_01875 1b20ba11a706ebca9235e69f0f304d3f 548 Gene3D G3DSA:3.40.50.980 30 186 1.0E-46 T 13-10-2018 BEN78_01185 dbbbb87f681f0f21e8744437f74cff89 267 Gene3D G3DSA:3.40.630.40 2 263 1.2E-74 T 13-10-2018 BEN78_01185 dbbbb87f681f0f21e8744437f74cff89 267 SUPERFAMILY SSF53187 4 261 1.32E-82 T 13-10-2018 BEN78_01185 dbbbb87f681f0f21e8744437f74cff89 267 TIGRFAM TIGR02017 hutG_amidohyd: N-formylglutamate deformylase 4 262 7.2E-107 T 13-10-2018 IPR010247 N-formylglutamate deformylase BEN78_01185 dbbbb87f681f0f21e8744437f74cff89 267 Pfam PF05013 N-formylglutamate amidohydrolase 12 231 1.0E-68 T 13-10-2018 IPR007709 N-formylglutamate amidohydrolase BEN78_06200 0947df7de8c138ae83ed438165cd04cb 332 Pfam PF14257 Domain of unknown function (DUF4349) 20 321 4.0E-25 T 13-10-2018 IPR025645 Domain of unknown function DUF4349 BEN78_16135 2c804962a82a1c3d099d0eecea79998e 136 Gene3D G3DSA:1.20.120.520 2 136 2.9E-12 T 13-10-2018 BEN78_16135 2c804962a82a1c3d099d0eecea79998e 136 Pfam PF01814 Hemerythrin HHE cation binding domain 3 133 5.1E-14 T 13-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 BEN78_08460 0b4acd6c64f62422569612868a8a450c 612 SUPERFAMILY SSF52016 419 607 2.9E-60 T 13-10-2018 BEN78_08460 0b4acd6c64f62422569612868a8a450c 612 Pfam PF00920 Dehydratase family 34 603 3.8E-218 T 13-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BEN78_08460 0b4acd6c64f62422569612868a8a450c 612 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 13-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BEN78_08460 0b4acd6c64f62422569612868a8a450c 612 SUPERFAMILY SSF143975 3 418 4.45E-134 T 13-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BEN78_08460 0b4acd6c64f62422569612868a8a450c 612 Gene3D G3DSA:3.50.30.80 419 571 1.5E-54 T 13-10-2018 BEN78_08460 0b4acd6c64f62422569612868a8a450c 612 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 606 44.9 T 13-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BEN78_08460 0b4acd6c64f62422569612868a8a450c 612 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 507 518 - T 13-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BEN78_08460 0b4acd6c64f62422569612868a8a450c 612 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 606 3.7E-246 T 13-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BEN78_14955 206f349d794837355323d7ac51e1075b 289 Pfam PF00561 alpha/beta hydrolase fold 58 162 1.4E-19 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN78_14955 206f349d794837355323d7ac51e1075b 289 Gene3D G3DSA:3.40.50.1820 31 281 3.4E-37 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_14955 206f349d794837355323d7ac51e1075b 289 SUPERFAMILY SSF53474 36 277 9.26E-35 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_16300 0f5548d9af24bb4ccbc082e07ff2da48 116 SUPERFAMILY SSF54427 5 112 7.15E-24 T 13-10-2018 IPR032710 NTF2-like domain superfamily BEN78_16300 0f5548d9af24bb4ccbc082e07ff2da48 116 Pfam PF12680 SnoaL-like domain 11 107 1.7E-18 T 13-10-2018 IPR037401 SnoaL-like domain BEN78_16300 0f5548d9af24bb4ccbc082e07ff2da48 116 TIGRFAM TIGR02246 TIGR02246: conserved hypothetical protein 6 97 3.6E-9 T 13-10-2018 IPR011944 Steroid delta5-4-isomerase KEGG: 00140+5.3.3.1|KEGG: 00984+5.3.3.1|MetaCyc: PWY-2582|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-699|MetaCyc: PWY-7299 BEN78_16300 0f5548d9af24bb4ccbc082e07ff2da48 116 Gene3D G3DSA:3.10.450.50 6 113 1.3E-27 T 13-10-2018 BEN78_01180 150527857e470768b058add6e90911a2 469 Gene3D G3DSA:1.20.1250.20 257 461 2.7E-18 T 13-10-2018 BEN78_01180 150527857e470768b058add6e90911a2 469 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 17 411 3.1E-71 T 13-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 BEN78_01180 150527857e470768b058add6e90911a2 469 SUPERFAMILY SSF103473 4 456 1.24E-63 T 13-10-2018 IPR036259 MFS transporter superfamily BEN78_01180 150527857e470768b058add6e90911a2 469 PRINTS PR01036 Tetracycline resistance protein TetB signature 107 127 2.2E-8 T 13-10-2018 BEN78_01180 150527857e470768b058add6e90911a2 469 PRINTS PR01036 Tetracycline resistance protein TetB signature 137 161 2.2E-8 T 13-10-2018 BEN78_01180 150527857e470768b058add6e90911a2 469 PRINTS PR01036 Tetracycline resistance protein TetB signature 398 417 2.2E-8 T 13-10-2018 BEN78_01180 150527857e470768b058add6e90911a2 469 PRINTS PR01036 Tetracycline resistance protein TetB signature 16 40 2.2E-8 T 13-10-2018 BEN78_01180 150527857e470768b058add6e90911a2 469 Pfam PF07690 Major Facilitator Superfamily 18 407 1.4E-46 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN78_01180 150527857e470768b058add6e90911a2 469 Gene3D G3DSA:1.20.1720.10 13 243 3.4E-46 T 13-10-2018 BEN78_11045 1d4ec0b3ac59b26e8a4d0aac0790326f 124 Gene3D G3DSA:3.30.1390.10 54 124 6.5E-31 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like BEN78_11045 1d4ec0b3ac59b26e8a4d0aac0790326f 124 SUPERFAMILY SSF54736 53 124 9.42E-24 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like BEN78_11045 1d4ec0b3ac59b26e8a4d0aac0790326f 124 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 60 124 9.0E-19 T 13-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_11045 1d4ec0b3ac59b26e8a4d0aac0790326f 124 Gene3D G3DSA:1.20.5.710 2 53 1.4E-22 T 13-10-2018 BEN78_11045 1d4ec0b3ac59b26e8a4d0aac0790326f 124 SUPERFAMILY SSF48300 4 60 1.57E-17 T 13-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_11045 1d4ec0b3ac59b26e8a4d0aac0790326f 124 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 124 25.664 T 13-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_11045 1d4ec0b3ac59b26e8a4d0aac0790326f 124 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 51 9.2E-19 T 13-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_11045 1d4ec0b3ac59b26e8a4d0aac0790326f 124 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 58 124 1.4E-29 T 13-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_11045 1d4ec0b3ac59b26e8a4d0aac0790326f 124 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 124 1.6E-50 T 13-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_07945 bebeaa9852e41ef45aaee07913b1553f 758 SUPERFAMILY SSF53474 503 756 3.46E-78 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_07945 bebeaa9852e41ef45aaee07913b1553f 758 Gene3D G3DSA:3.40.50.1820 499 758 2.9E-86 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_07945 bebeaa9852e41ef45aaee07913b1553f 758 Gene3D G3DSA:2.140.10.30 29 497 6.4E-178 T 13-10-2018 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily BEN78_07945 bebeaa9852e41ef45aaee07913b1553f 758 Pfam PF00326 Prolyl oligopeptidase family 562 757 1.3E-58 T 13-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 BEN78_07945 bebeaa9852e41ef45aaee07913b1553f 758 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 136 466 2.2E-87 T 13-10-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 BEN78_07945 bebeaa9852e41ef45aaee07913b1553f 758 SUPERFAMILY SSF82171 46 484 2.49E-54 T 13-10-2018 BEN78_06980 68520c1990970e8bdb6e951242f5999a 181 Pfam PF02470 MlaD protein 43 121 1.3E-20 T 13-10-2018 IPR003399 Mce/MlaD BEN78_06980 68520c1990970e8bdb6e951242f5999a 181 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 8 152 2.8E-44 T 13-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 BEN78_15645 aaca9d45a35b9ca50f6174365d9405b1 267 Gene3D G3DSA:3.40.50.720 1 265 5.5E-91 T 13-10-2018 BEN78_15645 aaca9d45a35b9ca50f6174365d9405b1 267 SUPERFAMILY SSF69572 6 259 4.71E-57 T 13-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 BEN78_15645 aaca9d45a35b9ca50f6174365d9405b1 267 Pfam PF00899 ThiF family 18 160 6.9E-34 T 13-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 BEN78_00755 b77dbd49d5f8f2aec7c5b60374b1870e 201 Gene3D G3DSA:2.60.120.10 53 189 1.5E-30 T 13-10-2018 IPR014710 RmlC-like jelly roll fold BEN78_00755 b77dbd49d5f8f2aec7c5b60374b1870e 201 SUPERFAMILY SSF51182 18 187 2.87E-31 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily BEN78_00755 b77dbd49d5f8f2aec7c5b60374b1870e 201 Pfam PF05995 Cysteine dioxygenase type I 75 178 5.2E-10 T 13-10-2018 IPR010300 Cysteine dioxygenase type I GO:0005506|GO:0016702|GO:0055114 KEGG: 00270+1.13.11.20|KEGG: 00430+1.13.11.20|MetaCyc: PWY-5331|Reactome: R-HSA-1614558 BEN78_10035 5470f344fe28b6f3b5794dddff8cab82 175 SUPERFAMILY SSF48452 66 152 4.22E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_10035 5470f344fe28b6f3b5794dddff8cab82 175 Gene3D G3DSA:1.25.40.10 37 165 2.9E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_16585 dce87d8bf92bb054eb7d9f68ea07fb7c 488 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 258 265 - T 13-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 BEN78_16585 dce87d8bf92bb054eb7d9f68ea07fb7c 488 Pfam PF00171 Aldehyde dehydrogenase family 30 478 5.1E-136 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BEN78_16585 dce87d8bf92bb054eb7d9f68ea07fb7c 488 Gene3D G3DSA:3.40.309.10 262 452 1.1E-153 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BEN78_16585 dce87d8bf92bb054eb7d9f68ea07fb7c 488 SUPERFAMILY SSF53720 13 485 4.84E-131 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BEN78_16585 dce87d8bf92bb054eb7d9f68ea07fb7c 488 Gene3D G3DSA:3.40.605.10 39 473 1.1E-153 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BEN78_01115 5ef69b5179d70c6cbd0e224e0bcff899 151 Gene3D G3DSA:1.10.10.10 49 93 2.5E-15 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_01115 5ef69b5179d70c6cbd0e224e0bcff899 151 Gene3D G3DSA:1.10.10.10 99 150 9.4E-12 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_01115 5ef69b5179d70c6cbd0e224e0bcff899 151 Pfam PF02631 RecX family 26 147 2.9E-24 T 13-10-2018 IPR003783 Regulatory protein RecX GO:0006282 BEN78_01115 5ef69b5179d70c6cbd0e224e0bcff899 151 Hamap MF_01114 Regulatory protein RecX [recX]. 4 151 12.336 T 13-10-2018 IPR003783 Regulatory protein RecX GO:0006282 BEN78_01115 5ef69b5179d70c6cbd0e224e0bcff899 151 Gene3D G3DSA:1.10.10.10 1 48 1.9E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_04945 598f6716105cc7ba16ec1faee48a316c 145 SUPERFAMILY SSF52788 3 144 6.54E-41 T 13-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily BEN78_04945 598f6716105cc7ba16ec1faee48a316c 145 Gene3D G3DSA:3.40.50.2300 1 145 4.0E-47 T 13-10-2018 BEN78_04945 598f6716105cc7ba16ec1faee48a316c 145 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 2.3E-20 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 BEN78_04945 598f6716105cc7ba16ec1faee48a316c 145 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 77 92 2.3E-20 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 BEN78_04945 598f6716105cc7ba16ec1faee48a316c 145 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 99 112 2.3E-20 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 BEN78_04945 598f6716105cc7ba16ec1faee48a316c 145 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 115 130 2.3E-20 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 BEN78_04945 598f6716105cc7ba16ec1faee48a316c 145 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 43 59 2.3E-20 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 BEN78_04945 598f6716105cc7ba16ec1faee48a316c 145 SMART SM00226 3 143 1.0E-44 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I BEN78_04945 598f6716105cc7ba16ec1faee48a316c 145 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 140 4.4E-37 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I BEN78_08770 61560e72f6c363f2a9cf34253cd42cd6 281 Pfam PF01678 Diaminopimelate epimerase 10 127 1.4E-22 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 BEN78_08770 61560e72f6c363f2a9cf34253cd42cd6 281 Pfam PF01678 Diaminopimelate epimerase 159 273 1.4E-24 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 BEN78_08770 61560e72f6c363f2a9cf34253cd42cd6 281 SUPERFAMILY SSF54506 148 279 3.93E-44 T 13-10-2018 BEN78_08770 61560e72f6c363f2a9cf34253cd42cd6 281 SUPERFAMILY SSF54506 8 136 7.22E-38 T 13-10-2018 BEN78_08770 61560e72f6c363f2a9cf34253cd42cd6 281 Gene3D G3DSA:3.10.310.10 121 268 7.4E-87 T 13-10-2018 BEN78_08770 61560e72f6c363f2a9cf34253cd42cd6 281 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 9 279 2.1E-72 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 BEN78_08770 61560e72f6c363f2a9cf34253cd42cd6 281 Gene3D G3DSA:3.10.310.10 10 277 7.4E-87 T 13-10-2018 BEN78_08770 61560e72f6c363f2a9cf34253cd42cd6 281 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 71 85 - T 13-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 BEN78_08770 61560e72f6c363f2a9cf34253cd42cd6 281 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 8 281 34.335 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 BEN78_12865 155423fc3f2b0e209e3e43dc0b4e2ade 87 SMART SM01387 6 86 3.2E-53 T 13-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_12865 155423fc3f2b0e209e3e43dc0b4e2ade 87 Gene3D G3DSA:1.10.287.10 1 87 5.2E-36 T 13-10-2018 BEN78_12865 155423fc3f2b0e209e3e43dc0b4e2ade 87 ProSitePatterns PS00362 Ribosomal protein S15 signature. 37 67 - T 13-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_12865 155423fc3f2b0e209e3e43dc0b4e2ade 87 SUPERFAMILY SSF47060 3 87 1.24E-36 T 13-10-2018 IPR009068 S15/NS1, RNA-binding BEN78_12865 155423fc3f2b0e209e3e43dc0b4e2ade 87 Pfam PF00312 Ribosomal protein S15 7 86 5.9E-39 T 13-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_12865 155423fc3f2b0e209e3e43dc0b4e2ade 87 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 3 87 1.3E-38 T 13-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_12865 155423fc3f2b0e209e3e43dc0b4e2ade 87 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 8 86 3.0E-30 T 13-10-2018 BEN78_12865 155423fc3f2b0e209e3e43dc0b4e2ade 87 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 1 87 22.405 T 13-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_05000 db21d9dd41958567b1ee31eb55e12ee9 367 Gene3D G3DSA:3.40.50.2000 184 348 2.6E-27 T 13-10-2018 BEN78_05000 db21d9dd41958567b1ee31eb55e12ee9 367 Pfam PF00534 Glycosyl transferases group 1 183 344 1.1E-19 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 BEN78_05000 db21d9dd41958567b1ee31eb55e12ee9 367 Pfam PF13579 Glycosyl transferase 4-like domain 24 160 3.6E-13 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 BEN78_05000 db21d9dd41958567b1ee31eb55e12ee9 367 SUPERFAMILY SSF53756 24 366 1.66E-44 T 13-10-2018 BEN78_05000 db21d9dd41958567b1ee31eb55e12ee9 367 Gene3D G3DSA:3.40.50.2000 1 183 3.1E-11 T 13-10-2018 BEN78_03265 fd94e61f92bfa62fc88e5e5abeb02306 195 Gene3D G3DSA:2.60.120.590 5 195 6.1E-66 T 13-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily BEN78_03265 fd94e61f92bfa62fc88e5e5abeb02306 195 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 13 191 1.3E-32 T 13-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like BEN78_03265 fd94e61f92bfa62fc88e5e5abeb02306 195 SUPERFAMILY SSF51197 4 193 7.42E-63 T 13-10-2018 BEN78_01340 aa6776e9301a29ffd08dd89bfe8f7163 543 Gene3D G3DSA:3.30.2290.10 37 232 3.8E-15 T 13-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal BEN78_01340 aa6776e9301a29ffd08dd89bfe8f7163 543 Pfam PF01523 Putative modulator of DNA gyrase 59 385 2.4E-53 T 13-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 BEN78_01340 aa6776e9301a29ffd08dd89bfe8f7163 543 SUPERFAMILY SSF111283 42 537 4.84E-86 T 13-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 BEN78_10640 1a23a8d9549f2502fa25fdfe35b0c00a 220 SMART SM00867 27 192 1.5E-43 T 13-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like BEN78_10640 1a23a8d9549f2502fa25fdfe35b0c00a 220 Gene3D G3DSA:2.40.128.110 26 198 6.2E-42 T 13-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily BEN78_10640 1a23a8d9549f2502fa25fdfe35b0c00a 220 SUPERFAMILY SSF101874 26 194 3.01E-43 T 13-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily BEN78_10640 1a23a8d9549f2502fa25fdfe35b0c00a 220 Pfam PF04264 YceI-like domain 28 191 1.2E-33 T 13-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like BEN78_04810 899a49d420d862f8df70c2e3d9c83272 516 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 11 513 49.589 T 13-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BEN78_04810 899a49d420d862f8df70c2e3d9c83272 516 SUPERFAMILY SSF53649 11 512 5.63E-72 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BEN78_04810 899a49d420d862f8df70c2e3d9c83272 516 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 89 301 1.6E-80 T 13-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BEN78_04810 899a49d420d862f8df70c2e3d9c83272 516 PIRSF PIRSF001492 6 515 5.3E-200 T 13-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BEN78_04810 899a49d420d862f8df70c2e3d9c83272 516 SUPERFAMILY SSF64158 84 311 4.05E-82 T 13-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BEN78_04810 899a49d420d862f8df70c2e3d9c83272 516 Pfam PF01676 Metalloenzyme superfamily 12 500 4.2E-71 T 13-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 BEN78_04810 899a49d420d862f8df70c2e3d9c83272 516 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 12 512 1.1E-215 T 13-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BEN78_04810 899a49d420d862f8df70c2e3d9c83272 516 Gene3D G3DSA:3.40.720.10 12 512 7.7E-209 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BEN78_04810 899a49d420d862f8df70c2e3d9c83272 516 Gene3D G3DSA:3.40.1450.10 84 313 7.7E-209 T 13-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BEN78_11085 118e1f026b9f6beab206ae72e314b020 217 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 9 212 2.1E-87 T 13-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_11085 118e1f026b9f6beab206ae72e314b020 217 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 7 215 38.987 T 13-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_11085 118e1f026b9f6beab206ae72e314b020 217 Pfam PF00297 Ribosomal protein L3 60 190 3.7E-19 T 13-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_11085 118e1f026b9f6beab206ae72e314b020 217 Gene3D G3DSA:2.40.50.620 39 101 1.3E-13 T 13-10-2018 BEN78_11085 118e1f026b9f6beab206ae72e314b020 217 SUPERFAMILY SSF50447 4 216 7.59E-80 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BEN78_11085 118e1f026b9f6beab206ae72e314b020 217 ProSitePatterns PS00474 Ribosomal protein L3 signature. 109 132 - T 13-10-2018 IPR019926 Ribosomal protein L3, conserved site BEN78_11085 118e1f026b9f6beab206ae72e314b020 217 Gene3D G3DSA:2.40.30.10 133 217 5.0E-15 T 13-10-2018 BEN78_15910 1c150327121bc30e52248678fccfe3b5 228 PIRSF PIRSF028451 1 228 1.3E-88 T 13-10-2018 IPR015996 Uncharacterised conserved protein UCP028451 BEN78_15910 1c150327121bc30e52248678fccfe3b5 228 Pfam PF09365 Conserved hypothetical protein (DUF2461) 9 219 1.1E-58 T 13-10-2018 IPR012808 Conserved hypothetical protein CHP02453 BEN78_15910 1c150327121bc30e52248678fccfe3b5 228 TIGRFAM TIGR02453 TIGR02453: TIGR02453 family protein 5 225 3.9E-77 T 13-10-2018 IPR012808 Conserved hypothetical protein CHP02453 BEN78_13300 2870d5d06bdebf33a9e044d8b455df8f 316 PIRSF PIRSF002849 2 315 3.8E-118 T 13-10-2018 BEN78_13300 2870d5d06bdebf33a9e044d8b455df8f 316 Gene3D G3DSA:1.10.8.300 211 313 2.8E-22 T 13-10-2018 BEN78_13300 2870d5d06bdebf33a9e044d8b455df8f 316 Gene3D G3DSA:3.40.50.300 11 204 6.5E-44 T 13-10-2018 BEN78_13300 2870d5d06bdebf33a9e044d8b455df8f 316 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 49 179 4.3E-63 T 13-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 BEN78_13300 2870d5d06bdebf33a9e044d8b455df8f 316 SUPERFAMILY SSF52540 15 292 2.67E-39 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_13895 84d6945b193225056bbf8d43f676588e 227 SUPERFAMILY SSF52833 1 211 1.33E-53 T 13-10-2018 IPR036249 Thioredoxin-like superfamily BEN78_13895 84d6945b193225056bbf8d43f676588e 227 Gene3D G3DSA:3.40.30.10 1 208 7.4E-75 T 13-10-2018 BEN78_13895 84d6945b193225056bbf8d43f676588e 227 Pfam PF01323 DSBA-like thioredoxin domain 2 204 6.0E-43 T 13-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 BEN78_06235 f3e8b7a7d98405ab44e7318df85dce1c 254 SMART SM00644 27 162 3.4E-29 T 13-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BEN78_06235 f3e8b7a7d98405ab44e7318df85dce1c 254 SUPERFAMILY SSF55846 27 179 5.37E-44 T 13-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BEN78_06235 f3e8b7a7d98405ab44e7318df85dce1c 254 Gene3D G3DSA:3.40.80.10 23 174 6.4E-43 T 13-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BEN78_06235 f3e8b7a7d98405ab44e7318df85dce1c 254 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 38 162 1.4E-25 T 13-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BEN78_01380 b3b82820d06233938a70e18fc3d76afb 603 Pfam PF05960 Bacterial protein of unknown function (DUF885) 61 597 5.0E-112 T 13-10-2018 IPR010281 Protein of unknown function DUF885 BEN78_12750 566aaed585bfd7166c31b8b06cdeb7e0 257 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 40 204 2.3E-38 T 13-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12750 566aaed585bfd7166c31b8b06cdeb7e0 257 SUPERFAMILY SSF143243 15 224 9.68E-50 T 13-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12750 566aaed585bfd7166c31b8b06cdeb7e0 257 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 165 186 - T 13-10-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12750 566aaed585bfd7166c31b8b06cdeb7e0 257 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 131 192 4.0E-21 T 13-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12750 566aaed585bfd7166c31b8b06cdeb7e0 257 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 13 212 31.855 T 13-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12750 566aaed585bfd7166c31b8b06cdeb7e0 257 Gene3D G3DSA:3.30.460.80 2 82 5.3E-5 T 13-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12750 566aaed585bfd7166c31b8b06cdeb7e0 257 Gene3D G3DSA:3.30.460.80 108 184 2.2E-26 T 13-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_13990 66e624fbea4590d27b3d60a4409adadb 257 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 1.1E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN78_13990 66e624fbea4590d27b3d60a4409adadb 257 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 1.1E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN78_13990 66e624fbea4590d27b3d60a4409adadb 257 SUPERFAMILY SSF46689 10 93 3.54E-14 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN78_13990 66e624fbea4590d27b3d60a4409adadb 257 Gene3D G3DSA:1.10.357.10 65 206 1.1E-8 T 13-10-2018 BEN78_13990 66e624fbea4590d27b3d60a4409adadb 257 Gene3D G3DSA:1.10.10.60 3 64 1.2E-12 T 13-10-2018 BEN78_13990 66e624fbea4590d27b3d60a4409adadb 257 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 68 6.9E-13 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN78_13925 708ebf81d0486ad69fa99be5af3a879a 247 Gene3D G3DSA:3.40.50.720 1 246 1.8E-83 T 13-10-2018 BEN78_13925 708ebf81d0486ad69fa99be5af3a879a 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 192 2.7E-5 T 13-10-2018 BEN78_13925 708ebf81d0486ad69fa99be5af3a879a 247 SUPERFAMILY SSF51735 6 246 3.47E-79 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_13925 708ebf81d0486ad69fa99be5af3a879a 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 2.6E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_13925 708ebf81d0486ad69fa99be5af3a879a 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 2.6E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_13925 708ebf81d0486ad69fa99be5af3a879a 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 2.6E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_13925 708ebf81d0486ad69fa99be5af3a879a 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.7E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_13925 708ebf81d0486ad69fa99be5af3a879a 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 1.7E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_13925 708ebf81d0486ad69fa99be5af3a879a 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.7E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_13925 708ebf81d0486ad69fa99be5af3a879a 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.7E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_13925 708ebf81d0486ad69fa99be5af3a879a 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.7E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_13925 708ebf81d0486ad69fa99be5af3a879a 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.7E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_13925 708ebf81d0486ad69fa99be5af3a879a 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 244 1.0E-62 T 13-10-2018 BEN78_11230 1dfbac75b6d21c66926e88a837da4317 194 Gene3D G3DSA:3.90.1140.10 5 181 8.9E-23 T 13-10-2018 BEN78_11230 1dfbac75b6d21c66926e88a837da4317 194 SUPERFAMILY SSF55144 8 181 4.01E-22 T 13-10-2018 IPR009097 Cyclic phosphodiesterase BEN78_11230 1dfbac75b6d21c66926e88a837da4317 194 Pfam PF13563 2'-5' RNA ligase superfamily 23 149 1.0E-8 T 13-10-2018 BEN78_13285 08847a0d50db4538dc437b1cc25ee336 163 PIRSF PIRSF004982 1 163 2.2E-42 T 13-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 BEN78_13285 08847a0d50db4538dc437b1cc25ee336 163 Pfam PF03843 Outer membrane lipoprotein Slp family 16 161 8.4E-42 T 13-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 BEN78_08320 c55311f3739fcbc61b82c31287cd98de 195 SUPERFAMILY SSF55469 13 191 2.36E-41 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BEN78_08320 c55311f3739fcbc61b82c31287cd98de 195 Gene3D G3DSA:3.40.109.10 4 193 7.2E-28 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BEN78_08320 c55311f3739fcbc61b82c31287cd98de 195 Pfam PF00881 Nitroreductase family 26 156 3.6E-13 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 BEN78_08320 c55311f3739fcbc61b82c31287cd98de 195 Hamap MF_01204 Probable malonic semialdehyde reductase RutE [rutE]. 2 195 44.673 T 13-10-2018 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE GO:0016491|GO:0055114 BEN78_05420 ce972037d74dd306ca9f46bec205a2ca 658 SUPERFAMILY SSF52540 2 627 3.86E-159 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_05420 ce972037d74dd306ca9f46bec205a2ca 658 Pfam PF00580 UvrD/REP helicase N-terminal domain 4 263 2.5E-68 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 BEN78_05420 ce972037d74dd306ca9f46bec205a2ca 658 Pfam PF13361 UvrD-like helicase C-terminal domain 269 601 5.5E-59 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 BEN78_05420 ce972037d74dd306ca9f46bec205a2ca 658 Gene3D G3DSA:3.40.50.300 272 621 2.2E-103 T 13-10-2018 BEN78_05420 ce972037d74dd306ca9f46bec205a2ca 658 Gene3D G3DSA:1.10.10.160 106 181 1.0E-85 T 13-10-2018 IPR013986 DExx box DNA helicase domain superfamily BEN78_05420 ce972037d74dd306ca9f46bec205a2ca 658 Gene3D G3DSA:1.10.486.10 375 534 2.2E-103 T 13-10-2018 BEN78_05420 ce972037d74dd306ca9f46bec205a2ca 658 Gene3D G3DSA:3.40.50.300 4 264 1.0E-85 T 13-10-2018 BEN78_00860 d82d5e9e57cc2d067471cc51ce1d0750 269 Pfam PF13614 AAA domain 3 160 8.9E-20 T 13-10-2018 IPR025669 AAA domain BEN78_00860 d82d5e9e57cc2d067471cc51ce1d0750 269 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 266 3.3E-111 T 13-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 BEN78_00860 d82d5e9e57cc2d067471cc51ce1d0750 269 SUPERFAMILY SSF52540 4 267 1.26E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_00860 d82d5e9e57cc2d067471cc51ce1d0750 269 Gene3D G3DSA:3.40.50.300 1 259 4.3E-68 T 13-10-2018 BEN78_00860 d82d5e9e57cc2d067471cc51ce1d0750 269 PIRSF PIRSF003092 1 269 1.5E-90 T 13-10-2018 IPR025501 ATP binding protein MinD BEN78_15490 f5f9dcb394025bec312c31c63fb6b535 265 Gene3D G3DSA:3.60.10.10 7 262 3.3E-63 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BEN78_15490 f5f9dcb394025bec312c31c63fb6b535 265 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 7 261 1.4E-64 T 13-10-2018 BEN78_15490 f5f9dcb394025bec312c31c63fb6b535 265 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 10 233 4.2E-16 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase BEN78_15490 f5f9dcb394025bec312c31c63fb6b535 265 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 33 42 - T 13-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 BEN78_15490 f5f9dcb394025bec312c31c63fb6b535 265 SUPERFAMILY SSF56219 7 262 9.42E-71 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BEN78_15490 f5f9dcb394025bec312c31c63fb6b535 265 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 7 262 5.2E-66 T 13-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 BEN78_05470 0ebc868c5bef17726d423b14fc6c71a5 227 Gene3D G3DSA:3.40.630.30 30 191 6.4E-23 T 13-10-2018 BEN78_05470 0ebc868c5bef17726d423b14fc6c71a5 227 SUPERFAMILY SSF55729 35 183 6.42E-20 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN78_05470 0ebc868c5bef17726d423b14fc6c71a5 227 Pfam PF13302 Acetyltransferase (GNAT) domain 41 180 1.2E-13 T 13-10-2018 IPR000182 GNAT domain BEN78_13970 0a4666ad9f270f1f87027bf6f3507e40 160 SUPERFAMILY SSF55781 11 155 8.94E-44 T 13-10-2018 BEN78_13970 0a4666ad9f270f1f87027bf6f3507e40 160 Gene3D G3DSA:3.30.450.40 10 160 1.0E-62 T 13-10-2018 IPR029016 GAF-like domain superfamily BEN78_13970 0a4666ad9f270f1f87027bf6f3507e40 160 Pfam PF13185 GAF domain 45 154 1.5E-12 T 13-10-2018 IPR003018 GAF domain GO:0005515 BEN78_13970 0a4666ad9f270f1f87027bf6f3507e40 160 SMART SM00065 14 160 5.9E-4 T 13-10-2018 IPR003018 GAF domain GO:0005515 BEN78_13970 0a4666ad9f270f1f87027bf6f3507e40 160 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 98 115 - T 13-10-2018 IPR000614 Free Met sulfoxide reductase conserved site BEN78_01580 cbabf03f7b9d473fce8b143d1866624b 720 Pfam PF03648 Glycosyl hydrolase family 67 N-terminus 26 143 2.0E-20 T 13-10-2018 IPR005154 Alpha glucuronidase, N-terminal GO:0045493|GO:0046559 BEN78_01580 cbabf03f7b9d473fce8b143d1866624b 720 Gene3D G3DSA:3.90.1330.10 494 717 2.8E-88 T 13-10-2018 IPR037054 Alpha-glucuronidase, C-terminal domain superfamily GO:0005576|GO:0045493|GO:0046559 BEN78_01580 cbabf03f7b9d473fce8b143d1866624b 720 PIRSF PIRSF029900 4 720 2.2E-294 T 13-10-2018 IPR011395 Alpha glucuronidase GO:0005576|GO:0045493|GO:0046559 BEN78_01580 cbabf03f7b9d473fce8b143d1866624b 720 Pfam PF07477 Glycosyl hydrolase family 67 C-terminus 473 696 6.7E-90 T 13-10-2018 IPR011099 Glycosyl hydrolase family 67, C-terminal GO:0005576|GO:0045493|GO:0046559 BEN78_01580 cbabf03f7b9d473fce8b143d1866624b 720 Pfam PF07488 Glycosyl hydrolase family 67 middle domain 147 471 1.1E-151 T 13-10-2018 IPR011100 Glycosyl hydrolase family 67, catalytic domain GO:0005576|GO:0045493|GO:0046559 BEN78_01580 cbabf03f7b9d473fce8b143d1866624b 720 Gene3D G3DSA:3.20.20.80 165 490 2.4E-158 T 13-10-2018 BEN78_01580 cbabf03f7b9d473fce8b143d1866624b 720 SUPERFAMILY SSF55545 21 163 1.39E-29 T 13-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 BEN78_01580 cbabf03f7b9d473fce8b143d1866624b 720 Gene3D G3DSA:3.30.379.10 41 160 8.2E-27 T 13-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 BEN78_01580 cbabf03f7b9d473fce8b143d1866624b 720 SUPERFAMILY SSF51445 165 717 9.05E-244 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily BEN78_00360 6f22afa94c7980b6098e6ef652847b98 183 Pfam PF00857 Isochorismatase family 6 170 2.4E-29 T 13-10-2018 IPR000868 Isochorismatase-like GO:0003824 BEN78_00360 6f22afa94c7980b6098e6ef652847b98 183 SUPERFAMILY SSF52499 3 167 1.96E-36 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 BEN78_00360 6f22afa94c7980b6098e6ef652847b98 183 Gene3D G3DSA:3.40.50.850 1 177 2.6E-38 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 BEN78_11755 1d57878bb57f41e564392341d403273d 461 SUPERFAMILY SSF56300 150 425 1.04E-43 T 13-10-2018 BEN78_11755 1d57878bb57f41e564392341d403273d 461 SUPERFAMILY SSF49363 42 144 3.27E-10 T 13-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 BEN78_11755 1d57878bb57f41e564392341d403273d 461 Pfam PF16656 Purple acid Phosphatase, N-terminal domain 46 143 6.0E-16 T 13-10-2018 IPR015914 Purple acid phosphatase, N-terminal GO:0003993|GO:0046872 BEN78_11755 1d57878bb57f41e564392341d403273d 461 Pfam PF00149 Calcineurin-like phosphoesterase 152 353 1.6E-15 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BEN78_11755 1d57878bb57f41e564392341d403273d 461 Gene3D G3DSA:3.60.21.10 146 384 7.7E-35 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like BEN78_08625 f9f7b96af38795a09ec6249b8eeb9f9d 435 Gene3D G3DSA:3.20.20.140 85 366 1.8E-71 T 13-10-2018 BEN78_08625 f9f7b96af38795a09ec6249b8eeb9f9d 435 Gene3D G3DSA:2.30.40.10 34 400 1.8E-71 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BEN78_08625 f9f7b96af38795a09ec6249b8eeb9f9d 435 SUPERFAMILY SSF51338 29 414 3.93E-22 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BEN78_08625 f9f7b96af38795a09ec6249b8eeb9f9d 435 SUPERFAMILY SSF51556 245 370 9.83E-9 T 13-10-2018 IPR032466 Metal-dependent hydrolase BEN78_08625 f9f7b96af38795a09ec6249b8eeb9f9d 435 Pfam PF01979 Amidohydrolase family 285 386 4.6E-9 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BEN78_13060 c148182a64ce67d2f93c106f683d4d97 118 Gene3D G3DSA:3.40.30.10 3 118 1.7E-46 T 13-10-2018 BEN78_13060 c148182a64ce67d2f93c106f683d4d97 118 Pfam PF03960 ArsC family 8 114 1.1E-17 T 13-10-2018 IPR006660 Arsenate reductase-like BEN78_13060 c148182a64ce67d2f93c106f683d4d97 118 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 7 117 1.3E-42 T 13-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 BEN78_13060 c148182a64ce67d2f93c106f683d4d97 118 SUPERFAMILY SSF52833 6 117 1.91E-34 T 13-10-2018 IPR036249 Thioredoxin-like superfamily BEN78_16430 99d66a1368f353306ea2d5c5e58a1380 207 PIRSF PIRSF035170 4 206 4.0E-51 T 13-10-2018 IPR009218 Predicted HD phosphohydrolase BEN78_16430 99d66a1368f353306ea2d5c5e58a1380 207 Gene3D G3DSA:1.10.3210.10 11 133 7.3E-7 T 13-10-2018 BEN78_16430 99d66a1368f353306ea2d5c5e58a1380 207 SUPERFAMILY SSF109604 17 184 2.45E-16 T 13-10-2018 BEN78_12830 045e5b2d81f93cce85090cbe3f6cdeb9 422 SUPERFAMILY SSF51197 8 244 2.33E-19 T 13-10-2018 BEN78_12830 045e5b2d81f93cce85090cbe3f6cdeb9 422 Gene3D G3DSA:2.60.120.650 8 235 2.5E-18 T 13-10-2018 BEN78_12830 045e5b2d81f93cce85090cbe3f6cdeb9 422 Pfam PF08007 Cupin superfamily protein 150 235 7.9E-6 T 13-10-2018 IPR003347 JmjC domain BEN78_15875 f46cccf0543d146f94fccd74916956b3 145 Pfam PF01042 Endoribonuclease L-PSP 9 137 6.4E-29 T 13-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 BEN78_15875 f46cccf0543d146f94fccd74916956b3 145 SUPERFAMILY SSF55298 6 138 1.88E-35 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BEN78_15875 f46cccf0543d146f94fccd74916956b3 145 Gene3D G3DSA:3.30.1330.40 1 143 1.2E-43 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BEN78_14995 88e5d1d29d25d2839e3c669398516e80 360 ProSitePatterns PS00770 Aminotransferases class-IV signature. 235 265 - T 13-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 BEN78_14995 88e5d1d29d25d2839e3c669398516e80 360 Gene3D G3DSA:3.30.470.10 27 355 1.9E-131 T 13-10-2018 BEN78_14995 88e5d1d29d25d2839e3c669398516e80 360 PIRSF PIRSF006468 3 360 6.4E-131 T 13-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 BEN78_14995 88e5d1d29d25d2839e3c669398516e80 360 SUPERFAMILY SSF56752 8 356 1.05E-112 T 13-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 BEN78_14995 88e5d1d29d25d2839e3c669398516e80 360 Pfam PF01063 Amino-transferase class IV 72 313 4.8E-32 T 13-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 BEN78_14995 88e5d1d29d25d2839e3c669398516e80 360 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 46 358 3.6E-129 T 13-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 BEN78_14995 88e5d1d29d25d2839e3c669398516e80 360 Gene3D G3DSA:3.20.10.10 173 342 1.9E-131 T 13-10-2018 BEN78_14905 23d98294b6e980c30a1e8a879e097714 672 SUPERFAMILY SSF56601 70 384 1.35E-78 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BEN78_14905 23d98294b6e980c30a1e8a879e097714 672 Gene3D G3DSA:3.40.710.10 62 401 5.4E-79 T 13-10-2018 BEN78_14905 23d98294b6e980c30a1e8a879e097714 672 Pfam PF00144 Beta-lactamase 71 389 2.1E-63 T 13-10-2018 IPR001466 Beta-lactamase-related BEN78_08670 fcd73faab833e24d4a865210e1f77925 377 Pfam PF10933 Protein of unknown function (DUF2827) 14 372 3.3E-137 T 13-10-2018 IPR021234 Protein of unknown function DUF2827 BEN78_04880 91b27f0b7b8944b7321bbbb33f907cc8 294 Gene3D G3DSA:1.20.120.80 78 294 3.6E-66 T 13-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_04880 91b27f0b7b8944b7321bbbb33f907cc8 294 Pfam PF00510 Cytochrome c oxidase subunit III 14 293 1.8E-55 T 13-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_04880 91b27f0b7b8944b7321bbbb33f907cc8 294 SUPERFAMILY SSF81452 11 293 1.47E-80 T 13-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_04880 91b27f0b7b8944b7321bbbb33f907cc8 294 Gene3D G3DSA:1.10.287.70 1 77 2.1E-18 T 13-10-2018 BEN78_15855 534d15f40cc8cc525608ddae17769ab9 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 5.6E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_15855 534d15f40cc8cc525608ddae17769ab9 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 5.6E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_15855 534d15f40cc8cc525608ddae17769ab9 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 5.6E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_15855 534d15f40cc8cc525608ddae17769ab9 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 5.6E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_15855 534d15f40cc8cc525608ddae17769ab9 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 5.6E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_15855 534d15f40cc8cc525608ddae17769ab9 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 5.6E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_15855 534d15f40cc8cc525608ddae17769ab9 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 256 7.6E-36 T 13-10-2018 BEN78_15855 534d15f40cc8cc525608ddae17769ab9 261 SUPERFAMILY SSF51735 1 259 1.48E-59 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_15855 534d15f40cc8cc525608ddae17769ab9 261 Gene3D G3DSA:3.40.50.720 1 260 5.6E-62 T 13-10-2018 BEN78_15340 bc926f4cecff58356284cec995114c29 225 SUPERFAMILY SSF103088 110 223 5.76E-40 T 13-10-2018 IPR036737 OmpA-like domain superfamily BEN78_15340 bc926f4cecff58356284cec995114c29 225 Pfam PF00691 OmpA family 119 214 2.8E-24 T 13-10-2018 IPR006665 OmpA-like domain BEN78_15340 bc926f4cecff58356284cec995114c29 225 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 165 182 4.3E-8 T 13-10-2018 BEN78_15340 bc926f4cecff58356284cec995114c29 225 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 183 202 4.3E-8 T 13-10-2018 BEN78_15340 bc926f4cecff58356284cec995114c29 225 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 203 223 4.3E-8 T 13-10-2018 BEN78_15340 bc926f4cecff58356284cec995114c29 225 Gene3D G3DSA:3.30.1330.60 83 224 1.3E-49 T 13-10-2018 IPR036737 OmpA-like domain superfamily BEN78_15340 bc926f4cecff58356284cec995114c29 225 Pfam PF13488 Glycine zipper 44 89 2.0E-11 T 13-10-2018 IPR039567 Glycine zipper domain BEN78_15340 bc926f4cecff58356284cec995114c29 225 PRINTS PR01021 OMPA domain signature 165 181 3.0E-17 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BEN78_15340 bc926f4cecff58356284cec995114c29 225 PRINTS PR01021 OMPA domain signature 120 142 3.0E-17 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BEN78_15340 bc926f4cecff58356284cec995114c29 225 PRINTS PR01021 OMPA domain signature 150 165 3.0E-17 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BEN78_00740 1e4d94d34980af34af54148044a21f34 147 Pfam PF03918 Cytochrome C biogenesis protein 21 136 1.7E-45 T 13-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family BEN78_00740 1e4d94d34980af34af54148044a21f34 147 Gene3D G3DSA:1.10.8.640 26 111 8.8E-31 T 13-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily BEN78_10060 797dcb64dbaef4b40f873b806fedc5f4 289 SUPERFAMILY SSF74653 171 284 7.85E-20 T 13-10-2018 BEN78_10060 797dcb64dbaef4b40f873b806fedc5f4 289 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 205 280 2.1E-15 T 13-10-2018 IPR006260 TonB/TolA, C-terminal BEN78_10060 797dcb64dbaef4b40f873b806fedc5f4 289 Gene3D G3DSA:3.30.1150.10 93 281 1.2E-20 T 13-10-2018 BEN78_10060 797dcb64dbaef4b40f873b806fedc5f4 289 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 203 271 2.2E-15 T 13-10-2018 IPR037682 TonB, C-terminal GO:0055085 BEN78_11195 eed39b83b6558d52f48c9a5bf2a0a793 130 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 11 127 2.8E-54 T 13-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_11195 eed39b83b6558d52f48c9a5bf2a0a793 130 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 130 32.423 T 13-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 BEN78_11195 eed39b83b6558d52f48c9a5bf2a0a793 130 Gene3D G3DSA:3.30.420.80 2 130 1.3E-53 T 13-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 BEN78_11195 eed39b83b6558d52f48c9a5bf2a0a793 130 ProSitePatterns PS00054 Ribosomal protein S11 signature. 98 120 - T 13-10-2018 IPR018102 Ribosomal S11, conserved site BEN78_11195 eed39b83b6558d52f48c9a5bf2a0a793 130 PIRSF PIRSF002131 1 130 2.4E-52 T 13-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 BEN78_11195 eed39b83b6558d52f48c9a5bf2a0a793 130 Pfam PF00411 Ribosomal protein S11 20 129 2.5E-49 T 13-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 BEN78_11195 eed39b83b6558d52f48c9a5bf2a0a793 130 SUPERFAMILY SSF53137 17 130 4.36E-46 T 13-10-2018 BEN78_10695 16d81d3c5136d66585eac53f53c112af 357 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 7 355 50.423 T 13-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 BEN78_10695 16d81d3c5136d66585eac53f53c112af 357 Gene3D G3DSA:3.20.20.210 1 357 1.7E-154 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 BEN78_10695 16d81d3c5136d66585eac53f53c112af 357 SUPERFAMILY SSF51726 4 356 1.92E-119 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 BEN78_10695 16d81d3c5136d66585eac53f53c112af 357 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 6 354 8.0E-141 T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 BEN78_10695 16d81d3c5136d66585eac53f53c112af 357 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 10 352 6.4E-130 T 13-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 BEN78_10695 16d81d3c5136d66585eac53f53c112af 357 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 23 32 - T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 BEN78_10695 16d81d3c5136d66585eac53f53c112af 357 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 143 159 - T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 BEN78_01810 afe805496048634a0fc9572ed0b99f56 145 Gene3D G3DSA:3.40.630.30 3 145 1.8E-39 T 13-10-2018 BEN78_01810 afe805496048634a0fc9572ed0b99f56 145 SUPERFAMILY SSF55729 2 141 3.43E-26 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN78_01810 afe805496048634a0fc9572ed0b99f56 145 Pfam PF13673 Acetyltransferase (GNAT) domain 47 130 2.2E-15 T 13-10-2018 IPR000182 GNAT domain BEN78_00340 50aad812e815966a2ec7e54a034c90f4 435 PIRSF PIRSF003095 1 434 2.1E-105 T 13-10-2018 IPR005215 Trigger factor GO:0015031 BEN78_00340 50aad812e815966a2ec7e54a034c90f4 435 Hamap MF_00303 Trigger factor [tig]. 1 421 18.231 T 13-10-2018 IPR005215 Trigger factor GO:0015031 BEN78_00340 50aad812e815966a2ec7e54a034c90f4 435 Gene3D G3DSA:3.30.70.1050 1 114 3.3E-34 T 13-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 BEN78_00340 50aad812e815966a2ec7e54a034c90f4 435 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 6.7E-35 T 13-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 BEN78_00340 50aad812e815966a2ec7e54a034c90f4 435 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 416 5.6E-37 T 13-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 BEN78_00340 50aad812e815966a2ec7e54a034c90f4 435 Gene3D G3DSA:1.10.3120.10 119 419 3.5E-72 T 13-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 BEN78_00340 50aad812e815966a2ec7e54a034c90f4 435 SUPERFAMILY SSF109998 248 431 1.44E-36 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily BEN78_00340 50aad812e815966a2ec7e54a034c90f4 435 Gene3D G3DSA:3.10.50.40 150 246 3.5E-72 T 13-10-2018 BEN78_00340 50aad812e815966a2ec7e54a034c90f4 435 SUPERFAMILY SSF54534 132 247 3.93E-17 T 13-10-2018 BEN78_00340 50aad812e815966a2ec7e54a034c90f4 435 SUPERFAMILY SSF102735 1 130 1.83E-32 T 13-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 BEN78_00340 50aad812e815966a2ec7e54a034c90f4 435 TIGRFAM TIGR00115 tig: trigger factor 11 414 2.8E-110 T 13-10-2018 IPR005215 Trigger factor GO:0015031 BEN78_16125 d09b9a56c4f3d679cce16173bd7c2250 291 PRINTS PR00069 Aldo-keto reductase signature 150 167 2.2E-9 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BEN78_16125 d09b9a56c4f3d679cce16173bd7c2250 291 PRINTS PR00069 Aldo-keto reductase signature 49 73 2.2E-9 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BEN78_16125 d09b9a56c4f3d679cce16173bd7c2250 291 PRINTS PR00069 Aldo-keto reductase signature 220 244 2.2E-9 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BEN78_16125 d09b9a56c4f3d679cce16173bd7c2250 291 PRINTS PR00069 Aldo-keto reductase signature 114 132 2.2E-9 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BEN78_16125 d09b9a56c4f3d679cce16173bd7c2250 291 Gene3D G3DSA:3.20.20.100 9 290 3.7E-61 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BEN78_16125 d09b9a56c4f3d679cce16173bd7c2250 291 SUPERFAMILY SSF51430 14 287 2.1E-62 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BEN78_16125 d09b9a56c4f3d679cce16173bd7c2250 291 Pfam PF00248 Aldo/keto reductase family 19 287 3.5E-45 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain BEN78_11565 5a601601a352a875eb4e16ca863fddaf 331 SUPERFAMILY SSF53474 48 330 1.98E-61 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_11565 5a601601a352a875eb4e16ca863fddaf 331 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 106 1.4E-14 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN78_11565 5a601601a352a875eb4e16ca863fddaf 331 PRINTS PR00111 Alpha/beta hydrolase fold signature 259 273 1.4E-14 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN78_11565 5a601601a352a875eb4e16ca863fddaf 331 PRINTS PR00111 Alpha/beta hydrolase fold signature 136 149 1.4E-14 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN78_11565 5a601601a352a875eb4e16ca863fddaf 331 PRINTS PR00111 Alpha/beta hydrolase fold signature 150 163 1.4E-14 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN78_11565 5a601601a352a875eb4e16ca863fddaf 331 Gene3D G3DSA:3.40.50.1820 20 330 6.1E-89 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_11565 5a601601a352a875eb4e16ca863fddaf 331 Pfam PF00561 alpha/beta hydrolase fold 68 172 6.5E-22 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN78_13075 5466afaa6fb80c8b1a9ad245d146efe4 366 Pfam PF13378 Enolase C-terminal domain-like 145 355 2.9E-50 T 13-10-2018 IPR029065 Enolase C-terminal domain-like BEN78_13075 5466afaa6fb80c8b1a9ad245d146efe4 366 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 11 124 2.9E-19 T 13-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain BEN78_13075 5466afaa6fb80c8b1a9ad245d146efe4 366 Gene3D G3DSA:3.30.390.10 1 355 5.4E-115 T 13-10-2018 IPR029017 Enolase-like, N-terminal BEN78_13075 5466afaa6fb80c8b1a9ad245d146efe4 366 SMART SM00922 142 240 1.3E-24 T 13-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal BEN78_13075 5466afaa6fb80c8b1a9ad245d146efe4 366 SUPERFAMILY SSF51604 112 356 2.1E-68 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily BEN78_13075 5466afaa6fb80c8b1a9ad245d146efe4 366 SUPERFAMILY SSF54826 1 125 1.77E-33 T 13-10-2018 BEN78_13075 5466afaa6fb80c8b1a9ad245d146efe4 366 Gene3D G3DSA:3.20.20.120 116 354 5.4E-115 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily BEN78_08475 bdcdeed2febe17f425242911bb046d14 193 Gene3D G3DSA:3.20.19.10 1 171 7.7E-63 T 13-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 BEN78_08475 bdcdeed2febe17f425242911bb046d14 193 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 10 182 1.6E-56 T 13-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 BEN78_08475 bdcdeed2febe17f425242911bb046d14 193 SUPERFAMILY SSF52016 11 178 2.94E-51 T 13-10-2018 BEN78_08475 bdcdeed2febe17f425242911bb046d14 193 Pfam PF00694 Aconitase C-terminal domain 14 123 2.9E-25 T 13-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 BEN78_06510 9ddf018dd2777dba1fc2eee539c751dc 318 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 155 2.4E-35 T 13-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain BEN78_06510 9ddf018dd2777dba1fc2eee539c751dc 318 SUPERFAMILY SSF48179 185 308 3.74E-23 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BEN78_06510 9ddf018dd2777dba1fc2eee539c751dc 318 Gene3D G3DSA:1.10.1040.10 186 315 4.5E-21 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BEN78_06510 9ddf018dd2777dba1fc2eee539c751dc 318 SUPERFAMILY SSF51735 1 139 1.43E-11 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_06510 9ddf018dd2777dba1fc2eee539c751dc 318 Gene3D G3DSA:3.40.50.720 1 182 6.1E-48 T 13-10-2018 BEN78_06510 9ddf018dd2777dba1fc2eee539c751dc 318 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 302 7.3E-57 T 13-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 BEN78_06510 9ddf018dd2777dba1fc2eee539c751dc 318 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 185 304 3.9E-22 T 13-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain BEN78_09095 3ebbb115802c382c97829e57c650a2d7 72 SUPERFAMILY SSF54534 2 68 1.44E-15 T 13-10-2018 BEN78_09095 3ebbb115802c382c97829e57c650a2d7 72 Gene3D G3DSA:3.10.50.30 1 71 3.3E-20 T 13-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 BEN78_09095 3ebbb115802c382c97829e57c650a2d7 72 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 1 68 1.1E-17 T 13-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 BEN78_04100 62b0fb63c02f832ac3a2d4065ac4eaf4 265 Hamap MF_01393 ATP synthase subunit a [atpB]. 13 265 15.189 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_04100 62b0fb63c02f832ac3a2d4065ac4eaf4 265 Pfam PF00119 ATP synthase A chain 38 259 3.5E-55 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_04100 62b0fb63c02f832ac3a2d4065ac4eaf4 265 SUPERFAMILY SSF81336 87 259 7.32E-39 T 13-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_04100 62b0fb63c02f832ac3a2d4065ac4eaf4 265 PRINTS PR00123 ATP synthase A subunit signature 245 260 2.5E-13 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_04100 62b0fb63c02f832ac3a2d4065ac4eaf4 265 PRINTS PR00123 ATP synthase A subunit signature 192 214 2.5E-13 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_04100 62b0fb63c02f832ac3a2d4065ac4eaf4 265 PRINTS PR00123 ATP synthase A subunit signature 95 111 2.5E-13 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_04100 62b0fb63c02f832ac3a2d4065ac4eaf4 265 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 33 259 6.3E-42 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_04100 62b0fb63c02f832ac3a2d4065ac4eaf4 265 ProSitePatterns PS00449 ATP synthase a subunit signature. 195 204 - T 13-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_04100 62b0fb63c02f832ac3a2d4065ac4eaf4 265 Gene3D G3DSA:1.20.120.220 86 265 9.1E-53 T 13-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_12315 50e45b6a2a9973ee39ca514957bf75bd 231 Gene3D G3DSA:3.10.50.40 129 231 7.3E-7 T 13-10-2018 BEN78_12315 50e45b6a2a9973ee39ca514957bf75bd 231 SUPERFAMILY SSF54534 33 205 1.16E-21 T 13-10-2018 BEN78_12315 50e45b6a2a9973ee39ca514957bf75bd 231 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 21 136 9.1E-27 T 13-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 BEN78_12315 50e45b6a2a9973ee39ca514957bf75bd 231 Gene3D G3DSA:1.10.287.460 21 128 2.5E-24 T 13-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 BEN78_05790 069ce3a9064f8f300f58dd67d5dac29a 397 SUPERFAMILY SSF52540 63 236 3.99E-7 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_05790 069ce3a9064f8f300f58dd67d5dac29a 397 Pfam PF03969 AFG1-like ATPase 121 393 1.4E-98 T 13-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 BEN78_05790 069ce3a9064f8f300f58dd67d5dac29a 397 Pfam PF03969 AFG1-like ATPase 7 91 6.9E-15 T 13-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 BEN78_05790 069ce3a9064f8f300f58dd67d5dac29a 397 Gene3D G3DSA:3.40.50.300 23 221 2.3E-11 T 13-10-2018 BEN78_05350 73eae23f4b4b0c5dce4cdf88651946d0 262 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 77 257 1.5E-7 T 13-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 BEN78_05350 73eae23f4b4b0c5dce4cdf88651946d0 262 SUPERFAMILY SSF56529 5 262 1.14E-71 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 BEN78_05350 73eae23f4b4b0c5dce4cdf88651946d0 262 Gene3D G3DSA:3.90.850.10 1 262 2.0E-77 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 BEN78_05350 73eae23f4b4b0c5dce4cdf88651946d0 262 TIGRFAM TIGR03218 catechol_dmpH: 4-oxalocrotonate decarboxylase 1 261 1.2E-114 T 13-10-2018 IPR017630 4-oxalocrotonate decarboxylase KEGG: 00362+4.1.1.77|KEGG: 00621+4.1.1.77|KEGG: 00622+4.1.1.77|MetaCyc: PWY-5419|MetaCyc: PWY-5644|MetaCyc: PWY-5645|MetaCyc: PWY-5647|MetaCyc: PWY-5654|MetaCyc: PWY-6210|MetaCyc: PWY-6214|MetaCyc: PWY-6336|MetaCyc: PWY-7006|MetaCyc: PWY-7009|MetaCyc: PWY-7480 BEN78_04580 bfd8d081ee34059f66f6129aa09f7bf4 275 Gene3D G3DSA:1.25.40.10 172 270 1.2E-10 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_04580 bfd8d081ee34059f66f6129aa09f7bf4 275 SUPERFAMILY SSF81901 33 254 2.88E-8 T 13-10-2018 BEN78_04580 bfd8d081ee34059f66f6129aa09f7bf4 275 SMART SM00671 184 219 0.0084 T 13-10-2018 IPR006597 Sel1-like repeat BEN78_03410 e5fcd49aa16be2cff75f48c14dbd495d 263 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 263 153.068 T 13-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 BEN78_03410 e5fcd49aa16be2cff75f48c14dbd495d 263 Gene3D G3DSA:3.30.360.110 44 88 1.8E-5 T 13-10-2018 BEN78_03410 e5fcd49aa16be2cff75f48c14dbd495d 263 Gene3D G3DSA:3.60.90.10 91 185 1.1E-7 T 13-10-2018 BEN78_03410 e5fcd49aa16be2cff75f48c14dbd495d 263 Pfam PF02675 S-adenosylmethionine decarboxylase 40 169 3.3E-32 T 13-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 BEN78_03410 e5fcd49aa16be2cff75f48c14dbd495d 263 PIRSF PIRSF001356 2 263 6.4E-143 T 13-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 BEN78_03410 e5fcd49aa16be2cff75f48c14dbd495d 263 SUPERFAMILY SSF56276 46 174 3.18E-24 T 13-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 BEN78_03410 e5fcd49aa16be2cff75f48c14dbd495d 263 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 7 261 4.8E-140 T 13-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 BEN78_12045 73365110cce936c8e45a7e6bd193febc 195 Pfam PF13740 ACT domain 23 96 1.4E-14 T 13-10-2018 BEN78_12045 73365110cce936c8e45a7e6bd193febc 195 Gene3D G3DSA:3.30.70.260 105 191 3.6E-16 T 13-10-2018 BEN78_12045 73365110cce936c8e45a7e6bd193febc 195 SUPERFAMILY SSF55021 106 194 6.34E-20 T 13-10-2018 BEN78_12045 73365110cce936c8e45a7e6bd193febc 195 SUPERFAMILY SSF55021 21 101 3.2E-8 T 13-10-2018 BEN78_12045 73365110cce936c8e45a7e6bd193febc 195 PIRSF PIRSF028103 20 195 1.1E-65 T 13-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 BEN78_12045 73365110cce936c8e45a7e6bd193febc 195 Gene3D G3DSA:3.30.70.260 36 102 4.9E-8 T 13-10-2018 BEN78_09165 eb0fa58a27ae523e17815599f2a857a2 160 Gene3D G3DSA:2.40.50.100 83 159 2.6E-30 T 13-10-2018 BEN78_09165 eb0fa58a27ae523e17815599f2a857a2 160 Pfam PF00364 Biotin-requiring enzyme 88 159 7.2E-21 T 13-10-2018 IPR000089 Biotin/lipoyl attachment BEN78_09165 eb0fa58a27ae523e17815599f2a857a2 160 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 89 102 1.1E-14 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 BEN78_09165 eb0fa58a27ae523e17815599f2a857a2 160 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 121 134 1.1E-14 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 BEN78_09165 eb0fa58a27ae523e17815599f2a857a2 160 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 106 120 1.1E-14 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 BEN78_09165 eb0fa58a27ae523e17815599f2a857a2 160 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 116 133 - T 13-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BEN78_09165 eb0fa58a27ae523e17815599f2a857a2 160 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 159 2.2E-53 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 BEN78_09165 eb0fa58a27ae523e17815599f2a857a2 160 SUPERFAMILY SSF51230 87 159 2.75E-23 T 13-10-2018 IPR011053 Single hybrid motif BEN78_08935 0e9cb6677097d3e88ff6f900a1b5eddf 161 Pfam PF04940 Sensors of blue-light using FAD 10 99 4.5E-22 T 13-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 BEN78_08935 0e9cb6677097d3e88ff6f900a1b5eddf 161 SMART SM01034 9 100 3.2E-24 T 13-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 BEN78_08935 0e9cb6677097d3e88ff6f900a1b5eddf 161 SUPERFAMILY SSF54975 9 125 1.37E-26 T 13-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 BEN78_08935 0e9cb6677097d3e88ff6f900a1b5eddf 161 Gene3D G3DSA:3.30.70.3200 3 146 5.9E-28 T 13-10-2018 BEN78_08480 08e8a98576b6499004f93865c37dcf3d 475 Pfam PF00330 Aconitase family (aconitate hydratase) 11 459 9.0E-140 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN78_08480 08e8a98576b6499004f93865c37dcf3d 475 Gene3D G3DSA:3.30.499.10 325 475 3.3E-48 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 BEN78_08480 08e8a98576b6499004f93865c37dcf3d 475 PRINTS PR00415 Aconitase family signature 218 231 5.7E-44 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN78_08480 08e8a98576b6499004f93865c37dcf3d 475 PRINTS PR00415 Aconitase family signature 204 217 5.7E-44 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN78_08480 08e8a98576b6499004f93865c37dcf3d 475 PRINTS PR00415 Aconitase family signature 345 356 5.7E-44 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN78_08480 08e8a98576b6499004f93865c37dcf3d 475 PRINTS PR00415 Aconitase family signature 142 157 5.7E-44 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN78_08480 08e8a98576b6499004f93865c37dcf3d 475 PRINTS PR00415 Aconitase family signature 91 104 5.7E-44 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN78_08480 08e8a98576b6499004f93865c37dcf3d 475 PRINTS PR00415 Aconitase family signature 295 309 5.7E-44 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN78_08480 08e8a98576b6499004f93865c37dcf3d 475 PRINTS PR00415 Aconitase family signature 401 414 5.7E-44 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN78_08480 08e8a98576b6499004f93865c37dcf3d 475 PRINTS PR00415 Aconitase family signature 117 125 5.7E-44 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN78_08480 08e8a98576b6499004f93865c37dcf3d 475 PRINTS PR00415 Aconitase family signature 128 141 5.7E-44 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN78_08480 08e8a98576b6499004f93865c37dcf3d 475 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 6 466 1.6E-189 T 13-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 BEN78_08480 08e8a98576b6499004f93865c37dcf3d 475 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 5 468 52.428 T 13-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 BEN78_08480 08e8a98576b6499004f93865c37dcf3d 475 ProSitePatterns PS00450 Aconitase family signature 1. 341 357 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 BEN78_08480 08e8a98576b6499004f93865c37dcf3d 475 Gene3D G3DSA:3.30.499.20 8 295 1.2E-94 T 13-10-2018 BEN78_08480 08e8a98576b6499004f93865c37dcf3d 475 SUPERFAMILY SSF53732 5 467 2.09E-149 T 13-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 BEN78_08480 08e8a98576b6499004f93865c37dcf3d 475 ProSitePatterns PS01244 Aconitase family signature 2. 401 414 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 BEN78_11605 76fdb0838a8b8796af063614ee27499d 212 SUPERFAMILY SSF50447 2 81 2.93E-14 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BEN78_11605 76fdb0838a8b8796af063614ee27499d 212 Pfam PF01411 tRNA synthetases class II (A) 14 85 1.3E-7 T 13-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 BEN78_11605 76fdb0838a8b8796af063614ee27499d 212 SMART SM00863 165 207 2.2E-5 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 BEN78_11605 76fdb0838a8b8796af063614ee27499d 212 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 177 205 1.2E-4 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 BEN78_11605 76fdb0838a8b8796af063614ee27499d 212 SUPERFAMILY SSF55186 83 209 3.01E-26 T 13-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 BEN78_11605 76fdb0838a8b8796af063614ee27499d 212 Gene3D G3DSA:3.30.980.10 83 211 2.3E-24 T 13-10-2018 BEN78_11605 76fdb0838a8b8796af063614ee27499d 212 Gene3D G3DSA:2.40.30.130 1 82 1.3E-14 T 13-10-2018 BEN78_05670 8764b1c149b69b6ed030d87511e526de 246 Gene3D G3DSA:3.40.50.880 16 241 4.3E-51 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN78_05670 8764b1c149b69b6ed030d87511e526de 246 SUPERFAMILY SSF52317 24 210 6.95E-38 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN78_05670 8764b1c149b69b6ed030d87511e526de 246 Pfam PF00117 Glutamine amidotransferase class-I 76 196 7.2E-17 T 13-10-2018 IPR017926 Glutamine amidotransferase BEN78_05670 8764b1c149b69b6ed030d87511e526de 246 PRINTS PR00096 Glutamine amidotransferase superfamily signature 183 196 9.6E-5 T 13-10-2018 BEN78_05670 8764b1c149b69b6ed030d87511e526de 246 PRINTS PR00096 Glutamine amidotransferase superfamily signature 92 103 9.6E-5 T 13-10-2018 BEN78_14920 7a289eeb6fddda65556936861bba306b 736 Pfam PF00593 TonB dependent receptor 305 735 1.2E-38 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_14920 7a289eeb6fddda65556936861bba306b 736 Gene3D G3DSA:2.40.170.20 48 736 4.5E-127 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_14920 7a289eeb6fddda65556936861bba306b 736 Pfam PF07715 TonB-dependent Receptor Plug Domain 57 168 2.9E-19 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_14920 7a289eeb6fddda65556936861bba306b 736 SUPERFAMILY SSF56935 35 736 1.41E-108 T 13-10-2018 BEN78_07485 7d763e7d7b3d3bf3c082888747faf1b5 524 SMART SM00228 188 267 8.5E-4 T 13-10-2018 IPR001478 PDZ domain GO:0005515 BEN78_07485 7d763e7d7b3d3bf3c082888747faf1b5 524 Pfam PF03572 Peptidase family S41 305 460 4.6E-24 T 13-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 BEN78_07485 7d763e7d7b3d3bf3c082888747faf1b5 524 Gene3D G3DSA:2.130.10.10 1 88 1.4E-5 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BEN78_07485 7d763e7d7b3d3bf3c082888747faf1b5 524 Gene3D G3DSA:3.30.750.44 106 176 3.1E-22 T 13-10-2018 BEN78_07485 7d763e7d7b3d3bf3c082888747faf1b5 524 SUPERFAMILY SSF50156 190 277 4.93E-16 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 BEN78_07485 7d763e7d7b3d3bf3c082888747faf1b5 524 Gene3D G3DSA:2.30.42.10 191 283 2.0E-11 T 13-10-2018 BEN78_07485 7d763e7d7b3d3bf3c082888747faf1b5 524 Pfam PF14685 Tricorn protease PDZ domain 191 275 3.8E-15 T 13-10-2018 IPR029414 Tricorn protease, PDZ domain BEN78_07485 7d763e7d7b3d3bf3c082888747faf1b5 524 Pfam PF14684 Tricorn protease C1 domain 108 176 1.8E-25 T 13-10-2018 IPR028204 Tricorn protease C1 domain BEN78_07485 7d763e7d7b3d3bf3c082888747faf1b5 524 Gene3D G3DSA:3.90.226.10 284 497 1.2E-60 T 13-10-2018 BEN78_07485 7d763e7d7b3d3bf3c082888747faf1b5 524 SMART SM00245 272 461 7.8E-5 T 13-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 BEN78_07485 7d763e7d7b3d3bf3c082888747faf1b5 524 SUPERFAMILY SSF52096 106 487 1.59E-61 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BEN78_03320 54b22fe68e774d1714ca9f865cef4abf 128 Pfam PF04138 GtrA-like protein 7 122 9.2E-17 T 13-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 BEN78_02125 8d2b107bf7ce6c6e13cad94cad83f716 260 Pfam PF01738 Dienelactone hydrolase family 37 254 7.0E-43 T 13-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 BEN78_02125 8d2b107bf7ce6c6e13cad94cad83f716 260 SUPERFAMILY SSF53474 26 255 2.7E-39 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_02125 8d2b107bf7ce6c6e13cad94cad83f716 260 Gene3D G3DSA:3.40.50.1820 15 256 4.2E-54 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_05595 a90191add1c2f3616fb17df0ba5acc16 193 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 178 2.0E-12 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BEN78_05595 a90191add1c2f3616fb17df0ba5acc16 193 SUPERFAMILY SSF88946 3 96 3.53E-5 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BEN78_05595 a90191add1c2f3616fb17df0ba5acc16 193 Gene3D G3DSA:1.10.10.10 115 181 1.4E-15 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_05595 a90191add1c2f3616fb17df0ba5acc16 193 Pfam PF07638 ECF sigma factor 1 178 1.5E-34 T 13-10-2018 IPR011517 RNA polymerase sigma-70 ECF-like BEN78_05595 a90191add1c2f3616fb17df0ba5acc16 193 TIGRFAM TIGR02999 Sig-70_X6: RNA polymerase sigma factor, TIGR02999 family 1 178 7.2E-48 T 13-10-2018 IPR011517 RNA polymerase sigma-70 ECF-like BEN78_05595 a90191add1c2f3616fb17df0ba5acc16 193 SUPERFAMILY SSF88659 121 178 2.24E-10 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN78_01765 67c4a349f2d485e2bbfd9521bdf96312 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.543 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 BEN78_01765 67c4a349f2d485e2bbfd9521bdf96312 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 13-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_01765 67c4a349f2d485e2bbfd9521bdf96312 65 Gene3D G3DSA:2.40.50.530 1 64 9.6E-22 T 13-10-2018 BEN78_01765 67c4a349f2d485e2bbfd9521bdf96312 65 SUPERFAMILY SSF143034 2 64 4.05E-23 T 13-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_01765 67c4a349f2d485e2bbfd9521bdf96312 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 2.6E-18 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 BEN78_01765 67c4a349f2d485e2bbfd9521bdf96312 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 2.6E-18 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 BEN78_01765 67c4a349f2d485e2bbfd9521bdf96312 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 2.6E-18 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 BEN78_01765 67c4a349f2d485e2bbfd9521bdf96312 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 2.0E-25 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 BEN78_01765 67c4a349f2d485e2bbfd9521bdf96312 65 Pfam PF01632 Ribosomal protein L35 2 62 1.5E-24 T 13-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_14605 c44e731fa0a25ca1e5e35a9b18b32827 377 Gene3D G3DSA:1.10.530.10 194 338 2.0E-46 T 13-10-2018 BEN78_14605 c44e731fa0a25ca1e5e35a9b18b32827 377 Pfam PF10135 Rod binding protein 38 84 7.8E-12 T 13-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal BEN78_14605 c44e731fa0a25ca1e5e35a9b18b32827 377 PRINTS PR01002 Flagellar protein FlgJ signature 16 39 7.1E-10 T 13-10-2018 BEN78_14605 c44e731fa0a25ca1e5e35a9b18b32827 377 PRINTS PR01002 Flagellar protein FlgJ signature 61 83 7.1E-10 T 13-10-2018 BEN78_14605 c44e731fa0a25ca1e5e35a9b18b32827 377 SMART SM00047 187 349 1.2E-40 T 13-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 BEN78_14605 c44e731fa0a25ca1e5e35a9b18b32827 377 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 204 337 3.8E-20 T 13-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 BEN78_14605 c44e731fa0a25ca1e5e35a9b18b32827 377 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 191 337 1.0E-57 T 13-10-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 BEN78_07675 fc44cc2b757b37c30eb34bad04647a78 263 SUPERFAMILY SSF117396 13 248 1.44E-70 T 13-10-2018 IPR036520 UPF0759 superfamily BEN78_07675 fc44cc2b757b37c30eb34bad04647a78 263 Gene3D G3DSA:3.20.20.410 6 249 8.8E-59 T 13-10-2018 IPR036520 UPF0759 superfamily BEN78_07675 fc44cc2b757b37c30eb34bad04647a78 263 Pfam PF01904 Protein of unknown function DUF72 34 245 1.1E-53 T 13-10-2018 IPR002763 Protein of unknown function DUF72 BEN78_09600 113993c5adb283652a544fd3e2a75e51 303 Gene3D G3DSA:2.70.70.10 149 299 1.5E-45 T 13-10-2018 IPR011055 Duplicated hybrid motif BEN78_09600 113993c5adb283652a544fd3e2a75e51 303 SUPERFAMILY SSF51261 161 295 2.98E-53 T 13-10-2018 IPR011055 Duplicated hybrid motif BEN78_09600 113993c5adb283652a544fd3e2a75e51 303 Pfam PF01551 Peptidase family M23 197 291 8.7E-32 T 13-10-2018 IPR016047 Peptidase M23 BEN78_10330 9dd507254069f8f7784762983694a123 745 Pfam PF00990 Diguanylate cyclase, GGDEF domain 579 736 5.1E-44 T 13-10-2018 IPR000160 GGDEF domain BEN78_10330 9dd507254069f8f7784762983694a123 745 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 576 739 2.0E-46 T 13-10-2018 IPR000160 GGDEF domain BEN78_10330 9dd507254069f8f7784762983694a123 745 SUPERFAMILY SSF55073 584 739 1.04E-46 T 13-10-2018 IPR029787 Nucleotide cyclase BEN78_10330 9dd507254069f8f7784762983694a123 745 SMART SM00267 568 740 8.3E-53 T 13-10-2018 IPR000160 GGDEF domain BEN78_10330 9dd507254069f8f7784762983694a123 745 Pfam PF07695 7TM diverse intracellular signalling 191 395 2.4E-9 T 13-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 BEN78_10330 9dd507254069f8f7784762983694a123 745 Gene3D G3DSA:3.30.70.270 573 742 1.7E-55 T 13-10-2018 BEN78_02160 19eb5d5d93f853092fed6c64737da1ba 133 Pfam PF00216 Bacterial DNA-binding protein 37 132 2.0E-16 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BEN78_02160 19eb5d5d93f853092fed6c64737da1ba 133 Gene3D G3DSA:4.10.520.10 35 133 8.1E-14 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 BEN78_02160 19eb5d5d93f853092fed6c64737da1ba 133 SMART SM00411 36 133 3.1E-9 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BEN78_02160 19eb5d5d93f853092fed6c64737da1ba 133 SUPERFAMILY SSF47729 36 132 1.91E-14 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 BEN78_07575 989a5dae7352bf6d06392e80cbfa4c52 264 Pfam PF02673 Bacitracin resistance protein BacA 7 254 4.3E-67 T 13-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 BEN78_07575 989a5dae7352bf6d06392e80cbfa4c52 264 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 2 260 15.777 T 13-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 BEN78_02570 064616481bb759bc9ccebaf52ac7f4ec 269 Gene3D G3DSA:1.10.575.10 23 267 3.9E-69 T 13-10-2018 IPR008947 Phospholipase C/P1 nuclease domain superfamily GO:0016788 BEN78_02570 064616481bb759bc9ccebaf52ac7f4ec 269 Pfam PF02265 S1/P1 Nuclease 23 264 1.0E-63 T 13-10-2018 IPR003154 S1/P1 nuclease GO:0003676|GO:0004519|GO:0006308 BEN78_02570 064616481bb759bc9ccebaf52ac7f4ec 269 SUPERFAMILY SSF48537 23 262 1.7E-57 T 13-10-2018 IPR008947 Phospholipase C/P1 nuclease domain superfamily GO:0016788 BEN78_09430 24eaecb23ee3eae40a0771171f194718 276 TIGRFAM TIGR02127 pyrF_sub2: orotidine 5'-phosphate decarboxylase 5 261 3.9E-72 T 13-10-2018 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN78_09430 24eaecb23ee3eae40a0771171f194718 276 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 92 105 - T 13-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BEN78_09430 24eaecb23ee3eae40a0771171f194718 276 Gene3D G3DSA:3.20.20.70 2 275 3.5E-103 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_09430 24eaecb23ee3eae40a0771171f194718 276 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 20 259 4.7E-32 T 13-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BEN78_09430 24eaecb23ee3eae40a0771171f194718 276 Hamap MF_01215 Orotidine 5'-phosphate decarboxylase [pyrF]. 4 274 33.876 T 13-10-2018 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN78_09430 24eaecb23ee3eae40a0771171f194718 276 SMART SM00934 19 261 4.4E-43 T 13-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BEN78_09430 24eaecb23ee3eae40a0771171f194718 276 SUPERFAMILY SSF51366 4 269 1.33E-73 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BEN78_02800 f7e99bb7fd455555fd99a28c12e53e24 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 63 79 1.5E-36 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BEN78_02800 f7e99bb7fd455555fd99a28c12e53e24 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 1.5E-36 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BEN78_02800 f7e99bb7fd455555fd99a28c12e53e24 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 109 128 1.5E-36 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BEN78_02800 f7e99bb7fd455555fd99a28c12e53e24 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 140 152 1.5E-36 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BEN78_02800 f7e99bb7fd455555fd99a28c12e53e24 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 85 101 1.5E-36 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BEN78_02800 f7e99bb7fd455555fd99a28c12e53e24 173 Gene3D G3DSA:3.30.420.10 4 159 5.8E-42 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BEN78_02800 f7e99bb7fd455555fd99a28c12e53e24 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 115 149 - T 13-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 BEN78_02800 f7e99bb7fd455555fd99a28c12e53e24 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 155 44.009 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BEN78_02800 f7e99bb7fd455555fd99a28c12e53e24 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 156 1.2E-49 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BEN78_02800 f7e99bb7fd455555fd99a28c12e53e24 173 SUPERFAMILY SSF53098 3 156 1.82E-45 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily BEN78_02800 f7e99bb7fd455555fd99a28c12e53e24 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 152 2.0E-46 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BEN78_01310 aa82291170f52fb43bc4e714affa8654 300 SUPERFAMILY SSF53300 83 233 5.78E-6 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BEN78_01310 aa82291170f52fb43bc4e714affa8654 300 Pfam PF01882 Protein of unknown function DUF58 47 135 3.3E-18 T 13-10-2018 IPR002881 Domain of unknown function DUF58 BEN78_07635 e2591b430f12dbb634b5b42fc4786357 720 SUPERFAMILY SSF52540 60 696 2.15E-17 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_07635 e2591b430f12dbb634b5b42fc4786357 720 SMART SM00491 570 701 1.2E-24 T 13-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 BEN78_07635 e2591b430f12dbb634b5b42fc4786357 720 Hamap MF_02205 ATP-dependent DNA helicase DinG [dinG]. 52 720 32.693 T 13-10-2018 IPR039000 ATP-dependent DNA helicase DinG GO:0004003 BEN78_07635 e2591b430f12dbb634b5b42fc4786357 720 Gene3D G3DSA:3.40.50.300 545 717 1.7E-27 T 13-10-2018 BEN78_07635 e2591b430f12dbb634b5b42fc4786357 720 Pfam PF13307 Helicase C-terminal domain 558 714 1.9E-30 T 13-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 BEN78_07490 5444647c0e43a707cbc1364d61f154ff 566 SUPERFAMILY SSF56235 29 566 1.22E-173 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BEN78_07490 5444647c0e43a707cbc1364d61f154ff 566 Gene3D G3DSA:3.60.20.40 375 566 6.0E-67 T 13-10-2018 BEN78_07490 5444647c0e43a707cbc1364d61f154ff 566 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 40 558 1.2E-112 T 13-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 BEN78_07490 5444647c0e43a707cbc1364d61f154ff 566 Pfam PF01019 Gamma-glutamyltranspeptidase 54 561 2.7E-154 T 13-10-2018 BEN78_07490 5444647c0e43a707cbc1364d61f154ff 566 Gene3D G3DSA:1.10.246.130 264 373 1.9E-37 T 13-10-2018 BEN78_07490 5444647c0e43a707cbc1364d61f154ff 566 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 248 264 5.7E-39 T 13-10-2018 BEN78_07490 5444647c0e43a707cbc1364d61f154ff 566 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 61 86 5.7E-39 T 13-10-2018 BEN78_07490 5444647c0e43a707cbc1364d61f154ff 566 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 277 296 5.7E-39 T 13-10-2018 BEN78_07490 5444647c0e43a707cbc1364d61f154ff 566 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 430 445 5.7E-39 T 13-10-2018 BEN78_07490 5444647c0e43a707cbc1364d61f154ff 566 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 454 471 5.7E-39 T 13-10-2018 BEN78_07490 5444647c0e43a707cbc1364d61f154ff 566 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 375 393 5.7E-39 T 13-10-2018 BEN78_07490 5444647c0e43a707cbc1364d61f154ff 566 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 399 417 5.7E-39 T 13-10-2018 BEN78_07490 5444647c0e43a707cbc1364d61f154ff 566 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 132 150 5.7E-39 T 13-10-2018 BEN78_07490 5444647c0e43a707cbc1364d61f154ff 566 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 150 169 5.7E-39 T 13-10-2018 BEN78_14895 a4f4277e4bed1b99d3d64128e84210a8 658 Pfam PF00144 Beta-lactamase 59 367 3.0E-66 T 13-10-2018 IPR001466 Beta-lactamase-related BEN78_14895 a4f4277e4bed1b99d3d64128e84210a8 658 SUPERFAMILY SSF56601 48 365 2.36E-77 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BEN78_14895 a4f4277e4bed1b99d3d64128e84210a8 658 Gene3D G3DSA:3.40.710.10 47 371 6.3E-84 T 13-10-2018 BEN78_06080 9ee790db19172f915285b00c7521555e 85 SUPERFAMILY SSF143120 1 74 2.09E-14 T 13-10-2018 IPR036165 YefM-like superfamily BEN78_06080 9ee790db19172f915285b00c7521555e 85 Gene3D G3DSA:3.40.1620.10 1 40 3.5E-5 T 13-10-2018 BEN78_06080 9ee790db19172f915285b00c7521555e 85 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 69 2.4E-13 T 13-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM BEN78_06080 9ee790db19172f915285b00c7521555e 85 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 5 55 5.3E-13 T 13-10-2018 BEN78_02315 c3ca9b858992f99e1f358991ce240d00 432 Pfam PF07670 Nucleoside recognition 97 196 3.8E-6 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 BEN78_02315 c3ca9b858992f99e1f358991ce240d00 432 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 12 85 1.6E-24 T 13-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 BEN78_02315 c3ca9b858992f99e1f358991ce240d00 432 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 208 427 9.5E-76 T 13-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 BEN78_10075 97aed6bea5ef9f10ae018281edf42805 121 Pfam PF00072 Response regulator receiver domain 4 115 3.4E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_10075 97aed6bea5ef9f10ae018281edf42805 121 SUPERFAMILY SSF52172 1 120 5.27E-36 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_10075 97aed6bea5ef9f10ae018281edf42805 121 Gene3D G3DSA:3.40.50.12740 1 121 5.7E-41 T 13-10-2018 BEN78_10075 97aed6bea5ef9f10ae018281edf42805 121 SMART SM00448 2 115 6.5E-35 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_13185 5d2f7f18b097ee92a52157dc1beb345e 252 Gene3D G3DSA:1.10.510.10 156 248 2.9E-9 T 13-10-2018 BEN78_13185 5d2f7f18b097ee92a52157dc1beb345e 252 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 45 244 1.4E-58 T 13-10-2018 BEN78_13185 5d2f7f18b097ee92a52157dc1beb345e 252 SUPERFAMILY SSF56112 48 206 1.89E-14 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily BEN78_13185 5d2f7f18b097ee92a52157dc1beb345e 252 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 10 246 33.8 T 13-10-2018 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 BEN78_09090 bf22ec30d0a760082ed91e49c9178460 200 Gene3D G3DSA:3.10.300.10 1 197 3.1E-61 T 13-10-2018 IPR036995 Methylpurine-DNA glycosylase superfamily GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 BEN78_09090 bf22ec30d0a760082ed91e49c9178460 200 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 4 188 1.9E-48 T 13-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 BEN78_09090 bf22ec30d0a760082ed91e49c9178460 200 SUPERFAMILY SSF50486 2 194 7.45E-61 T 13-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 BEN78_09090 bf22ec30d0a760082ed91e49c9178460 200 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 7 185 5.3E-57 T 13-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 BEN78_09090 bf22ec30d0a760082ed91e49c9178460 200 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 6 188 30.274 T 13-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 BEN78_04865 6e5cf185d8be0bb044775f732ec3322c 194 SUPERFAMILY SSF52833 66 191 7.44E-5 T 13-10-2018 IPR036249 Thioredoxin-like superfamily BEN78_13720 9c9ab563b6be5dfa197227e4093e704c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 1.4E-32 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_13720 9c9ab563b6be5dfa197227e4093e704c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 1.4E-32 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_13720 9c9ab563b6be5dfa197227e4093e704c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.4E-32 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_13720 9c9ab563b6be5dfa197227e4093e704c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.4E-32 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_13720 9c9ab563b6be5dfa197227e4093e704c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 1.4E-32 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_13720 9c9ab563b6be5dfa197227e4093e704c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.4E-32 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_13720 9c9ab563b6be5dfa197227e4093e704c 256 SUPERFAMILY SSF51735 7 251 1.2E-61 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_13720 9c9ab563b6be5dfa197227e4093e704c 256 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 193 0.003 T 13-10-2018 BEN78_13720 9c9ab563b6be5dfa197227e4093e704c 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 7.2E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_13720 9c9ab563b6be5dfa197227e4093e704c 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 7.2E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_13720 9c9ab563b6be5dfa197227e4093e704c 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 7.2E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_13720 9c9ab563b6be5dfa197227e4093e704c 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 249 1.3E-46 T 13-10-2018 BEN78_13720 9c9ab563b6be5dfa197227e4093e704c 256 Gene3D G3DSA:3.40.50.720 4 254 5.0E-74 T 13-10-2018 BEN78_13720 9c9ab563b6be5dfa197227e4093e704c 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BEN78_12965 776302a1fba63be0adc3ebe61cf00620 532 SUPERFAMILY SSF54106 263 308 7.46E-7 T 13-10-2018 BEN78_12965 776302a1fba63be0adc3ebe61cf00620 532 SUPERFAMILY SSF54001 146 225 1.08E-7 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BEN78_12965 776302a1fba63be0adc3ebe61cf00620 532 SMART SM00257 262 308 5.0E-9 T 13-10-2018 IPR018392 LysM domain BEN78_12965 776302a1fba63be0adc3ebe61cf00620 532 SMART SM00257 314 360 4.5E-10 T 13-10-2018 IPR018392 LysM domain BEN78_12965 776302a1fba63be0adc3ebe61cf00620 532 SMART SM00257 19 64 4.6E-12 T 13-10-2018 IPR018392 LysM domain BEN78_12965 776302a1fba63be0adc3ebe61cf00620 532 SUPERFAMILY SSF54106 20 64 2.09E-9 T 13-10-2018 BEN78_12965 776302a1fba63be0adc3ebe61cf00620 532 Pfam PF01476 LysM domain 20 64 1.2E-12 T 13-10-2018 IPR018392 LysM domain BEN78_12965 776302a1fba63be0adc3ebe61cf00620 532 Pfam PF01476 LysM domain 316 360 6.2E-10 T 13-10-2018 IPR018392 LysM domain BEN78_12965 776302a1fba63be0adc3ebe61cf00620 532 Pfam PF01476 LysM domain 264 308 2.3E-9 T 13-10-2018 IPR018392 LysM domain BEN78_12965 776302a1fba63be0adc3ebe61cf00620 532 TIGRFAM TIGR02594 TIGR02594: TIGR02594 family protein 102 231 1.3E-22 T 13-10-2018 IPR013423 Conserved hypothetical protein CHP02594 BEN78_12965 776302a1fba63be0adc3ebe61cf00620 532 Gene3D G3DSA:3.90.1720.10 105 241 5.6E-8 T 13-10-2018 BEN78_12965 776302a1fba63be0adc3ebe61cf00620 532 SUPERFAMILY SSF54106 313 360 7.72E-9 T 13-10-2018 BEN78_12965 776302a1fba63be0adc3ebe61cf00620 532 Gene3D G3DSA:3.10.350.10 9 78 4.9E-18 T 13-10-2018 IPR036779 LysM domain superfamily BEN78_12965 776302a1fba63be0adc3ebe61cf00620 532 Gene3D G3DSA:3.10.350.10 312 375 5.9E-14 T 13-10-2018 IPR036779 LysM domain superfamily BEN78_12965 776302a1fba63be0adc3ebe61cf00620 532 Gene3D G3DSA:3.10.350.10 251 311 2.2E-12 T 13-10-2018 IPR036779 LysM domain superfamily BEN78_10115 e9177253c67b90ac1df983c508f5c7f2 475 PIRSF PIRSF000521 37 441 1.1E-19 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BEN78_10115 e9177253c67b90ac1df983c508f5c7f2 475 SUPERFAMILY SSF53383 21 468 4.29E-115 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_10115 e9177253c67b90ac1df983c508f5c7f2 475 Gene3D G3DSA:3.90.1150.10 24 461 3.2E-147 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN78_10115 e9177253c67b90ac1df983c508f5c7f2 475 Pfam PF00202 Aminotransferase class-III 36 468 3.7E-104 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BEN78_10115 e9177253c67b90ac1df983c508f5c7f2 475 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 25 468 1.6E-156 T 13-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 BEN78_10115 e9177253c67b90ac1df983c508f5c7f2 475 Gene3D G3DSA:3.40.640.10 76 366 3.2E-147 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN78_14925 ddf5a6ccb80c1360b5b8db7618139e56 347 Gene3D G3DSA:3.40.50.720 17 139 2.8E-21 T 13-10-2018 BEN78_14925 ddf5a6ccb80c1360b5b8db7618139e56 347 Pfam PF07755 Domain of unknown function (DUF1611_C) P-loop domain 143 334 1.3E-70 T 13-10-2018 IPR035086 Domain of unknown function DUF1611, P-loop BEN78_14925 ddf5a6ccb80c1360b5b8db7618139e56 347 Gene3D G3DSA:3.40.50.300 140 346 3.1E-69 T 13-10-2018 BEN78_14925 ddf5a6ccb80c1360b5b8db7618139e56 347 Pfam PF17396 Domain of unknown function (DUF1611_N) Rossmann-like domain 52 137 3.9E-23 T 13-10-2018 IPR035402 Domain of unknown function DUF1611-N, Rossmann-like domain BEN78_14925 ddf5a6ccb80c1360b5b8db7618139e56 347 SUPERFAMILY SSF52540 12 344 5.31E-102 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_14925 ddf5a6ccb80c1360b5b8db7618139e56 347 PIRSF PIRSF026760 15 345 1.2E-88 T 13-10-2018 IPR011669 Uncharacterised conserved protein UCP026760 BEN78_02950 1eaf0112efb03268f194af6c335ee5fc 754 Gene3D G3DSA:2.40.170.20 50 754 6.1E-119 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_02950 1eaf0112efb03268f194af6c335ee5fc 754 SUPERFAMILY SSF56935 40 754 2.6E-100 T 13-10-2018 BEN78_02950 1eaf0112efb03268f194af6c335ee5fc 754 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 168 4.6E-12 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_02950 1eaf0112efb03268f194af6c335ee5fc 754 Pfam PF00593 TonB dependent receptor 264 748 8.2E-37 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_04260 93c6d6859501141cf55f0e4ace1078e4 330 SUPERFAMILY SSF141523 194 327 2.88E-27 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like BEN78_04260 93c6d6859501141cf55f0e4ace1078e4 330 Pfam PF01471 Putative peptidoglycan binding domain 57 108 8.1E-12 T 13-10-2018 IPR002477 Peptidoglycan binding-like BEN78_04260 93c6d6859501141cf55f0e4ace1078e4 330 SUPERFAMILY SSF47090 51 109 9.42E-13 T 13-10-2018 IPR036365 PGBD-like superfamily BEN78_04260 93c6d6859501141cf55f0e4ace1078e4 330 Gene3D G3DSA:1.10.101.10 48 121 1.9E-10 T 13-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 BEN78_04260 93c6d6859501141cf55f0e4ace1078e4 330 Gene3D G3DSA:2.40.440.10 137 330 1.2E-44 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like BEN78_04260 93c6d6859501141cf55f0e4ace1078e4 330 Pfam PF03734 L,D-transpeptidase catalytic domain 196 326 4.8E-17 T 13-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 BEN78_16335 1ffce510fc71900066cbaa9bdfa7509f 692 SUPERFAMILY SSF53474 455 667 8.7E-6 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_16335 1ffce510fc71900066cbaa9bdfa7509f 692 SUPERFAMILY SSF53474 335 530 7.23E-6 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_16335 1ffce510fc71900066cbaa9bdfa7509f 692 SUPERFAMILY SSF54001 57 261 2.0E-28 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BEN78_16335 1ffce510fc71900066cbaa9bdfa7509f 692 Pfam PF00112 Papain family cysteine protease 58 247 6.9E-9 T 13-10-2018 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 BEN78_16335 1ffce510fc71900066cbaa9bdfa7509f 692 Gene3D G3DSA:3.90.70.10 16 262 9.3E-57 T 13-10-2018 BEN78_08800 6af498f02904039fc9e35770ab120e26 461 Pfam PF07724 AAA domain (Cdc48 subfamily) 207 348 1.4E-38 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BEN78_08800 6af498f02904039fc9e35770ab120e26 461 SUPERFAMILY SSF52540 8 459 8.69E-87 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_08800 6af498f02904039fc9e35770ab120e26 461 SMART SM00382 54 355 2.7E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_08800 6af498f02904039fc9e35770ab120e26 461 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 58 145 4.5E-7 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BEN78_08800 6af498f02904039fc9e35770ab120e26 461 SMART SM01086 354 452 2.0E-23 T 13-10-2018 IPR019489 Clp ATPase, C-terminal BEN78_08800 6af498f02904039fc9e35770ab120e26 461 Gene3D G3DSA:1.10.8.60 354 458 4.8E-38 T 13-10-2018 BEN78_08800 6af498f02904039fc9e35770ab120e26 461 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 9 461 4.0E-202 T 13-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 BEN78_08800 6af498f02904039fc9e35770ab120e26 461 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 354 424 1.3E-6 T 13-10-2018 IPR019489 Clp ATPase, C-terminal BEN78_08800 6af498f02904039fc9e35770ab120e26 461 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 6 461 43.376 T 13-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 BEN78_03805 8bad5636ed2ad64f631bebb798df7d7a 295 Gene3D G3DSA:3.90.79.10 155 291 1.7E-33 T 13-10-2018 BEN78_03805 8bad5636ed2ad64f631bebb798df7d7a 295 SUPERFAMILY SSF55811 106 264 1.76E-42 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BEN78_03805 8bad5636ed2ad64f631bebb798df7d7a 295 Pfam PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain 38 119 6.6E-7 T 13-10-2018 IPR015375 NADH pyrophosphatase-like, N-terminal GO:0016787 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 BEN78_03805 8bad5636ed2ad64f631bebb798df7d7a 295 Gene3D G3DSA:3.90.79.20 31 153 7.2E-12 T 13-10-2018 BEN78_03805 8bad5636ed2ad64f631bebb798df7d7a 295 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 121 152 6.9E-9 T 13-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 BEN78_03805 8bad5636ed2ad64f631bebb798df7d7a 295 Pfam PF00293 NUDIX domain 157 265 2.1E-15 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BEN78_07765 3dbbbc450f034dfb862b8c4800e17a8e 273 Gene3D G3DSA:2.60.40.2600 126 266 2.3E-43 T 13-10-2018 BEN78_07765 3dbbbc450f034dfb862b8c4800e17a8e 273 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 177 225 - T 13-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_07765 3dbbbc450f034dfb862b8c4800e17a8e 273 SUPERFAMILY SSF49503 127 247 1.88E-37 T 13-10-2018 IPR008972 Cupredoxin BEN78_07765 3dbbbc450f034dfb862b8c4800e17a8e 273 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 158 227 2.4E-16 T 13-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_12775 97daabf06adb7c8a4503ab3a113bfba5 358 Pfam PF00146 NADH dehydrogenase 28 346 6.3E-121 T 13-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12775 97daabf06adb7c8a4503ab3a113bfba5 358 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 21 352 24.164 T 13-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12775 97daabf06adb7c8a4503ab3a113bfba5 358 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 226 239 - T 13-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12435 6dc91fbf1097b4747ca1944697589c74 395 Gene3D G3DSA:1.10.287.470 120 185 3.0E-6 T 13-10-2018 BEN78_12435 6dc91fbf1097b4747ca1944697589c74 395 Gene3D G3DSA:2.40.30.170 227 348 1.5E-34 T 13-10-2018 BEN78_12435 6dc91fbf1097b4747ca1944697589c74 395 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 57 287 2.3E-18 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BEN78_12435 6dc91fbf1097b4747ca1944697589c74 395 SUPERFAMILY SSF111369 57 181 1.57E-8 T 13-10-2018 BEN78_12435 6dc91fbf1097b4747ca1944697589c74 395 Pfam PF00529 HlyD membrane-fusion protein of T1SS 29 343 1.4E-13 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BEN78_12435 6dc91fbf1097b4747ca1944697589c74 395 Gene3D G3DSA:1.10.287.470 91 111 1.4E-9 T 13-10-2018 BEN78_12435 6dc91fbf1097b4747ca1944697589c74 395 Gene3D G3DSA:2.40.50.100 57 90 1.4E-9 T 13-10-2018 BEN78_12435 6dc91fbf1097b4747ca1944697589c74 395 SUPERFAMILY SSF111369 165 264 2.22E-11 T 13-10-2018 BEN78_06205 41bbe024e729dfcc67ce04b5c3c8d646 698 SUPERFAMILY SSF82171 58 367 1.96E-16 T 13-10-2018 BEN78_06205 41bbe024e729dfcc67ce04b5c3c8d646 698 Gene3D G3DSA:3.40.50.1820 372 669 2.1E-74 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_06205 41bbe024e729dfcc67ce04b5c3c8d646 698 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 513 533 4.6E-5 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BEN78_06205 41bbe024e729dfcc67ce04b5c3c8d646 698 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 455 479 4.6E-5 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BEN78_06205 41bbe024e729dfcc67ce04b5c3c8d646 698 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 591 613 4.6E-5 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BEN78_06205 41bbe024e729dfcc67ce04b5c3c8d646 698 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 483 502 4.6E-5 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BEN78_06205 41bbe024e729dfcc67ce04b5c3c8d646 698 Gene3D G3DSA:2.120.10.30 43 239 1.9E-12 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BEN78_06205 41bbe024e729dfcc67ce04b5c3c8d646 698 Pfam PF00326 Prolyl oligopeptidase family 447 659 3.8E-41 T 13-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 BEN78_06205 41bbe024e729dfcc67ce04b5c3c8d646 698 SUPERFAMILY SSF53474 397 658 1.09E-63 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_15120 9d8dec367284d8ce9191e04a66337747 446 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 10 111 1.2E-26 T 13-10-2018 IPR017508 HipA, N-terminal subdomain 1 BEN78_15120 9d8dec367284d8ce9191e04a66337747 446 Pfam PF07804 HipA-like C-terminal domain 159 410 4.2E-49 T 13-10-2018 IPR012893 HipA-like, C-terminal BEN78_15120 9d8dec367284d8ce9191e04a66337747 446 Pfam PF13657 HipA N-terminal domain 10 111 9.1E-22 T 13-10-2018 IPR017508 HipA, N-terminal subdomain 1 BEN78_06945 bd3cb4926a5a9aa56c986c8d20daa9d1 139 Gene3D G3DSA:3.30.10.10 72 138 1.2E-21 T 13-10-2018 BEN78_06945 bd3cb4926a5a9aa56c986c8d20daa9d1 139 Pfam PF11720 Peptidase inhibitor I78 family 75 139 8.4E-17 T 13-10-2018 IPR021719 Proteinase inhibitor I78 BEN78_07120 39d1dd455d7cc90561ec376c4c875858 90 Pfam PF02583 Metal-sensitive transcriptional repressor 7 86 5.9E-22 T 13-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 BEN78_07120 39d1dd455d7cc90561ec376c4c875858 90 Gene3D G3DSA:1.20.58.1000 1 90 5.6E-30 T 13-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily BEN78_01520 25eb9899fe6b18d10b338fe5794d936b 167 Pfam PF13560 Helix-turn-helix domain 6 62 4.2E-12 T 13-10-2018 BEN78_01520 25eb9899fe6b18d10b338fe5794d936b 167 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 21 47 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN78_01520 25eb9899fe6b18d10b338fe5794d936b 167 Gene3D G3DSA:1.10.260.40 3 67 4.6E-15 T 13-10-2018 BEN78_01520 25eb9899fe6b18d10b338fe5794d936b 167 SUPERFAMILY SSF47413 6 74 1.89E-13 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN78_01520 25eb9899fe6b18d10b338fe5794d936b 167 SMART SM00530 10 66 3.1E-8 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN78_10840 c66647e5ea8ba67344ce6d59a481da8f 157 Gene3D G3DSA:3.40.930.10 1 147 1.1E-37 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BEN78_10840 c66647e5ea8ba67344ce6d59a481da8f 157 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 13-10-2018 IPR002178 PTS EIIA type-2 domain BEN78_10840 c66647e5ea8ba67344ce6d59a481da8f 157 SUPERFAMILY SSF55804 1 146 3.53E-34 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BEN78_10840 c66647e5ea8ba67344ce6d59a481da8f 157 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 146 5.2E-28 T 13-10-2018 IPR002178 PTS EIIA type-2 domain BEN78_04505 61a26f93aa2ba29a59ef47b89372c7a9 786 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 183 6.4E-20 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_04505 61a26f93aa2ba29a59ef47b89372c7a9 786 SUPERFAMILY SSF56935 48 786 1.94E-82 T 13-10-2018 BEN78_04505 61a26f93aa2ba29a59ef47b89372c7a9 786 Pfam PF00593 TonB dependent receptor 393 783 2.2E-35 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_04505 61a26f93aa2ba29a59ef47b89372c7a9 786 Gene3D G3DSA:2.170.130.10 43 187 1.5E-27 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_04505 61a26f93aa2ba29a59ef47b89372c7a9 786 Gene3D G3DSA:2.40.170.20 188 786 2.2E-57 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_12380 9667d61ec4c6522cb119b45c11fd3608 162 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 6 162 16.636 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 BEN78_12380 9667d61ec4c6522cb119b45c11fd3608 162 TIGRFAM TIGR00077 lspA: signal peptidase II 9 162 6.9E-44 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 BEN78_12380 9667d61ec4c6522cb119b45c11fd3608 162 Pfam PF01252 Signal peptidase (SPase) II 15 156 2.2E-38 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 BEN78_12380 9667d61ec4c6522cb119b45c11fd3608 162 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 53 61 2.4E-15 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 BEN78_12380 9667d61ec4c6522cb119b45c11fd3608 162 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 137 153 2.4E-15 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 BEN78_12380 9667d61ec4c6522cb119b45c11fd3608 162 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 101 116 2.4E-15 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 BEN78_11535 8618690d15c91e6d1640da063f2eee6d 129 SUPERFAMILY SSF161084 7 128 1.44E-21 T 13-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily BEN78_11535 8618690d15c91e6d1640da063f2eee6d 129 Pfam PF01124 MAPEG family 11 126 1.4E-16 T 13-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein BEN78_11535 8618690d15c91e6d1640da063f2eee6d 129 Gene3D G3DSA:1.20.120.550 4 129 2.0E-16 T 13-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily BEN78_05590 07db878915b8d077d602a83b32b2535f 959 Gene3D G3DSA:3.30.200.20 89 178 1.4E-16 T 13-10-2018 BEN78_05590 07db878915b8d077d602a83b32b2535f 959 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 104 129 - T 13-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 BEN78_05590 07db878915b8d077d602a83b32b2535f 959 Gene3D G3DSA:1.10.510.10 186 380 5.5E-33 T 13-10-2018 BEN78_05590 07db878915b8d077d602a83b32b2535f 959 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 218 230 - T 13-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 BEN78_05590 07db878915b8d077d602a83b32b2535f 959 SMART SM00220 98 371 4.5E-27 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 BEN78_05590 07db878915b8d077d602a83b32b2535f 959 Pfam PF00069 Protein kinase domain 99 298 1.9E-32 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 BEN78_05590 07db878915b8d077d602a83b32b2535f 959 Gene3D G3DSA:1.25.40.10 604 771 1.0E-16 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_05590 07db878915b8d077d602a83b32b2535f 959 SUPERFAMILY SSF56112 93 299 2.16E-49 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily BEN78_05590 07db878915b8d077d602a83b32b2535f 959 SUPERFAMILY SSF48452 550 748 8.68E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_10295 15312a2863ad15662ebf821a206b59b4 313 Pfam PF05661 Protein of unknown function (DUF808) 4 296 3.8E-111 T 13-10-2018 IPR008526 Inner membrane protein YedI BEN78_10295 15312a2863ad15662ebf821a206b59b4 313 PIRSF PIRSF016660 1 308 5.8E-119 T 13-10-2018 IPR008526 Inner membrane protein YedI BEN78_13540 77538304dcddf7b472d4a198ba0768ac 296 Gene3D G3DSA:3.60.10.10 35 293 4.2E-82 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BEN78_13540 77538304dcddf7b472d4a198ba0768ac 296 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 56 283 4.6E-15 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase BEN78_13540 77538304dcddf7b472d4a198ba0768ac 296 SUPERFAMILY SSF56219 36 291 7.98E-39 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BEN78_13375 86b2b112de50afd5a82cd54b862bf761 410 Pfam PF13372 Alginate export 32 161 1.8E-7 T 13-10-2018 IPR025388 Alginate export domain BEN78_02820 07916cfead50c44083051156e39a30bb 141 Gene3D G3DSA:3.30.300.20 48 140 7.5E-33 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta BEN78_02820 07916cfead50c44083051156e39a30bb 141 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 7 139 1.6E-54 T 13-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 BEN78_02820 07916cfead50c44083051156e39a30bb 141 SUPERFAMILY SSF82784 1 139 7.59E-46 T 13-10-2018 IPR036102 OsmC/Ohr superfamily BEN78_02820 07916cfead50c44083051156e39a30bb 141 Pfam PF02566 OsmC-like protein 44 138 8.2E-18 T 13-10-2018 IPR003718 OsmC/Ohr family BEN78_02820 07916cfead50c44083051156e39a30bb 141 Gene3D G3DSA:2.20.25.10 1 47 1.0E-21 T 13-10-2018 BEN78_03595 2b0f0e541980f2c662d73fd8aded2d97 254 Gene3D G3DSA:3.40.50.720 2 252 2.1E-71 T 13-10-2018 BEN78_03595 2b0f0e541980f2c662d73fd8aded2d97 254 SUPERFAMILY SSF51735 10 252 1.78E-69 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_03595 2b0f0e541980f2c662d73fd8aded2d97 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 2.1E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_03595 2b0f0e541980f2c662d73fd8aded2d97 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 2.1E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_03595 2b0f0e541980f2c662d73fd8aded2d97 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.1E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_03595 2b0f0e541980f2c662d73fd8aded2d97 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 250 2.0E-51 T 13-10-2018 BEN78_03595 2b0f0e541980f2c662d73fd8aded2d97 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.2E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_03595 2b0f0e541980f2c662d73fd8aded2d97 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.2E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_03595 2b0f0e541980f2c662d73fd8aded2d97 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.2E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_03595 2b0f0e541980f2c662d73fd8aded2d97 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.2E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_03595 2b0f0e541980f2c662d73fd8aded2d97 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 1.2E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_03595 2b0f0e541980f2c662d73fd8aded2d97 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 1.2E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_09450 bdb411b23b4f6c005fb06a1cda4f8fe1 427 SUPERFAMILY SSF53383 6 426 2.36E-178 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN78_09450 bdb411b23b4f6c005fb06a1cda4f8fe1 427 Pfam PF00464 Serine hydroxymethyltransferase 9 396 8.4E-182 T 13-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 BEN78_09450 bdb411b23b4f6c005fb06a1cda4f8fe1 427 Gene3D G3DSA:3.90.1150.10 11 403 9.6E-184 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN78_09450 bdb411b23b4f6c005fb06a1cda4f8fe1 427 PIRSF PIRSF000412 3 427 4.1E-166 T 13-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 BEN78_09450 bdb411b23b4f6c005fb06a1cda4f8fe1 427 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 427 51.134 T 13-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 BEN78_09450 bdb411b23b4f6c005fb06a1cda4f8fe1 427 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 226 242 - T 13-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 BEN78_09450 bdb411b23b4f6c005fb06a1cda4f8fe1 427 Gene3D G3DSA:3.40.640.10 37 299 9.6E-184 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN78_04790 8a87db2c4b83dea80a6f673058eb8f8f 346 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 335 63.291 T 13-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 BEN78_04790 8a87db2c4b83dea80a6f673058eb8f8f 346 SUPERFAMILY SSF53067 3 127 1.88E-30 T 13-10-2018 BEN78_04790 8a87db2c4b83dea80a6f673058eb8f8f 346 Gene3D G3DSA:3.30.420.40 133 297 9.4E-124 T 13-10-2018 BEN78_04790 8a87db2c4b83dea80a6f673058eb8f8f 346 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 317 1.4E-129 T 13-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 BEN78_04790 8a87db2c4b83dea80a6f673058eb8f8f 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 80 100 1.1E-52 T 13-10-2018 IPR017861 Kae1/TsaD family BEN78_04790 8a87db2c4b83dea80a6f673058eb8f8f 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 135 147 1.1E-52 T 13-10-2018 IPR017861 Kae1/TsaD family BEN78_04790 8a87db2c4b83dea80a6f673058eb8f8f 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 267 276 1.1E-52 T 13-10-2018 IPR017861 Kae1/TsaD family BEN78_04790 8a87db2c4b83dea80a6f673058eb8f8f 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 158 179 1.1E-52 T 13-10-2018 IPR017861 Kae1/TsaD family BEN78_04790 8a87db2c4b83dea80a6f673058eb8f8f 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.1E-52 T 13-10-2018 IPR017861 Kae1/TsaD family BEN78_04790 8a87db2c4b83dea80a6f673058eb8f8f 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 101 120 1.1E-52 T 13-10-2018 IPR017861 Kae1/TsaD family BEN78_04790 8a87db2c4b83dea80a6f673058eb8f8f 346 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 310 1.2E-112 T 13-10-2018 IPR017861 Kae1/TsaD family BEN78_04790 8a87db2c4b83dea80a6f673058eb8f8f 346 SUPERFAMILY SSF53067 105 313 1.97E-40 T 13-10-2018 BEN78_04790 8a87db2c4b83dea80a6f673058eb8f8f 346 Pfam PF00814 Glycoprotease family 29 311 1.4E-100 T 13-10-2018 IPR000905 Gcp-like domain BEN78_04790 8a87db2c4b83dea80a6f673058eb8f8f 346 Gene3D G3DSA:3.30.420.40 3 319 9.4E-124 T 13-10-2018 BEN78_04790 8a87db2c4b83dea80a6f673058eb8f8f 346 ProSitePatterns PS01016 Glycoprotease family signature. 100 120 - T 13-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 BEN78_13120 8c8aefee9006cb7da00037b37ded0f37 403 SUPERFAMILY SSF54106 356 399 1.83E-9 T 13-10-2018 BEN78_13120 8c8aefee9006cb7da00037b37ded0f37 403 SUPERFAMILY SSF53955 106 247 2.39E-31 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily BEN78_13120 8c8aefee9006cb7da00037b37ded0f37 403 Pfam PF01464 Transglycosylase SLT domain 117 220 1.8E-21 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 BEN78_13120 8c8aefee9006cb7da00037b37ded0f37 403 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 127 155 - T 13-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 BEN78_13120 8c8aefee9006cb7da00037b37ded0f37 403 Gene3D G3DSA:1.10.530.10 108 259 7.3E-25 T 13-10-2018 BEN78_13120 8c8aefee9006cb7da00037b37ded0f37 403 Gene3D G3DSA:3.10.350.10 354 400 3.0E-13 T 13-10-2018 IPR036779 LysM domain superfamily BEN78_13120 8c8aefee9006cb7da00037b37ded0f37 403 SMART SM00257 356 400 2.6E-9 T 13-10-2018 IPR018392 LysM domain BEN78_13120 8c8aefee9006cb7da00037b37ded0f37 403 Pfam PF01476 LysM domain 357 399 6.9E-12 T 13-10-2018 IPR018392 LysM domain BEN78_04200 389e251082e9445c5872759396c5905a 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 8.5E-11 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BEN78_04200 389e251082e9445c5872759396c5905a 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 8.5E-11 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BEN78_04200 389e251082e9445c5872759396c5905a 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 8.5E-11 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BEN78_04200 389e251082e9445c5872759396c5905a 106 Pfam PF01022 Bacterial regulatory protein, arsR family 22 66 1.9E-11 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BEN78_04200 389e251082e9445c5872759396c5905a 106 SUPERFAMILY SSF46785 5 92 8.26E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_04200 389e251082e9445c5872759396c5905a 106 SMART SM00418 15 93 2.7E-22 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BEN78_04200 389e251082e9445c5872759396c5905a 106 Gene3D G3DSA:1.10.10.10 2 104 1.2E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_11370 47a9f59e130743e9efdf93254a8770ca 214 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 13-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 BEN78_11370 47a9f59e130743e9efdf93254a8770ca 214 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 198 3.9E-58 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 BEN78_11370 47a9f59e130743e9efdf93254a8770ca 214 Gene3D G3DSA:3.40.50.1240 1 211 2.5E-58 T 13-10-2018 IPR029033 Histidine phosphatase superfamily BEN78_11370 47a9f59e130743e9efdf93254a8770ca 214 SMART SM00855 2 158 1.2E-21 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 BEN78_11370 47a9f59e130743e9efdf93254a8770ca 214 SUPERFAMILY SSF53254 1 203 4.12E-56 T 13-10-2018 IPR029033 Histidine phosphatase superfamily BEN78_11370 47a9f59e130743e9efdf93254a8770ca 214 PIRSF PIRSF000709 1 177 2.7E-12 T 13-10-2018 BEN78_15305 51dfe23fab6f15d20d20dd60976b082a 275 Gene3D G3DSA:1.10.260.40 4 94 6.7E-19 T 13-10-2018 BEN78_15305 51dfe23fab6f15d20d20dd60976b082a 275 Pfam PF13413 Helix-turn-helix domain 18 76 4.0E-17 T 13-10-2018 BEN78_15305 51dfe23fab6f15d20d20dd60976b082a 275 Pfam PF13464 Domain of unknown function (DUF4115) 191 264 2.6E-16 T 13-10-2018 IPR025194 Domain of unknown function DUF4115 BEN78_05780 93f6188ac90946e84b3e79c7f8d73a69 570 SUPERFAMILY SSF56219 265 562 2.45E-29 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BEN78_05780 93f6188ac90946e84b3e79c7f8d73a69 570 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 276 531 3.5E-8 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase BEN78_05780 93f6188ac90946e84b3e79c7f8d73a69 570 Gene3D G3DSA:3.60.10.10 267 566 5.8E-27 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BEN78_10725 4fe57c91b24674568bdc304c2fd02a96 205 SUPERFAMILY SSF51735 1 204 2.53E-37 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_10725 4fe57c91b24674568bdc304c2fd02a96 205 Pfam PF13460 NAD(P)H-binding 8 189 5.6E-31 T 13-10-2018 IPR016040 NAD(P)-binding domain BEN78_10725 4fe57c91b24674568bdc304c2fd02a96 205 Gene3D G3DSA:3.40.50.720 3 204 3.3E-51 T 13-10-2018 BEN78_15940 fd98d5b317128c9425e3a37ccb29cdaf 519 Pfam PF16370 C terminal of Calcineurin-like phosphoesterase 332 501 2.5E-30 T 13-10-2018 IPR032288 Calcineurin-like phosphoesterase, C-terminal BEN78_15940 fd98d5b317128c9425e3a37ccb29cdaf 519 SUPERFAMILY SSF56300 122 380 5.91E-31 T 13-10-2018 BEN78_15940 fd98d5b317128c9425e3a37ccb29cdaf 519 SUPERFAMILY SSF117074 30 70 7.72E-6 T 13-10-2018 BEN78_15940 fd98d5b317128c9425e3a37ccb29cdaf 519 Gene3D G3DSA:3.60.21.10 120 401 5.4E-15 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like BEN78_10490 74cf7d88043b2dcd6a79c7ef9fc7dc91 115 Pfam PF09842 Predicted membrane protein (DUF2069) 12 101 2.8E-12 T 13-10-2018 IPR018643 Protein of unknown function DUF2069, membrane BEN78_16825 b5bef1e0c5af9524a5946a87e6bfa159 856 ProSitePatterns PS00211 ABC transporters family signature. 728 742 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN78_16825 b5bef1e0c5af9524a5946a87e6bfa159 856 ProSitePatterns PS00211 ABC transporters family signature. 375 389 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN78_16825 b5bef1e0c5af9524a5946a87e6bfa159 856 Gene3D G3DSA:1.20.1580.10 612 769 2.3E-126 T 13-10-2018 BEN78_16825 b5bef1e0c5af9524a5946a87e6bfa159 856 Pfam PF00005 ABC transporter 510 758 7.2E-6 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_16825 b5bef1e0c5af9524a5946a87e6bfa159 856 SUPERFAMILY SSF52540 506 811 4.09E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_16825 b5bef1e0c5af9524a5946a87e6bfa159 856 SUPERFAMILY SSF52540 16 457 5.05E-29 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_16825 b5bef1e0c5af9524a5946a87e6bfa159 856 Gene3D G3DSA:3.40.50.300 502 834 2.3E-126 T 13-10-2018 BEN78_02280 5b0df0113d215a05f5bbd18eedd80e1c 143 Pfam PF01957 NfeD-like C-terminal, partner-binding 8 141 2.4E-25 T 13-10-2018 IPR002810 NfeD-like, C-terminal domain BEN78_10870 c4d0c7f85c6b691b90f237177aea357f 183 Pfam PF08282 haloacid dehalogenase-like hydrolase 93 150 4.0E-6 T 13-10-2018 BEN78_10870 c4d0c7f85c6b691b90f237177aea357f 183 PIRSF PIRSF006118 7 180 9.9E-58 T 13-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 BEN78_10870 c4d0c7f85c6b691b90f237177aea357f 183 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 21 171 6.0E-34 T 13-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 BEN78_10870 c4d0c7f85c6b691b90f237177aea357f 183 SUPERFAMILY SSF56784 16 176 9.07E-37 T 13-10-2018 IPR036412 HAD-like superfamily BEN78_10870 c4d0c7f85c6b691b90f237177aea357f 183 Gene3D G3DSA:3.40.50.1000 2 179 2.8E-48 T 13-10-2018 IPR023214 HAD superfamily BEN78_03820 49e0996fbe5d8edc0d91c873507e8729 197 Pfam PF13548 Domain of unknown function (DUF4126) 8 174 5.4E-40 T 13-10-2018 IPR025196 Domain of unknown function DUF4126 BEN78_05985 07bc96653cdf2169e174f78dec73ebc5 417 Pfam PF13657 HipA N-terminal domain 16 127 6.4E-7 T 13-10-2018 IPR017508 HipA, N-terminal subdomain 1 BEN78_05985 07bc96653cdf2169e174f78dec73ebc5 417 Pfam PF07804 HipA-like C-terminal domain 182 390 5.6E-47 T 13-10-2018 IPR012893 HipA-like, C-terminal BEN78_03160 3c5df64146ae3f6445b2a89fb75e8984 1027 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 25 1027 8.1E-217 T 13-10-2018 IPR010104 Bacterial TonB-dependent receptor BEN78_03160 3c5df64146ae3f6445b2a89fb75e8984 1027 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 153 5.3E-15 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_03160 3c5df64146ae3f6445b2a89fb75e8984 1027 Gene3D G3DSA:2.170.130.10 18 158 7.2E-16 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_03160 3c5df64146ae3f6445b2a89fb75e8984 1027 Pfam PF00593 TonB dependent receptor 476 1026 1.7E-40 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_03160 3c5df64146ae3f6445b2a89fb75e8984 1027 SUPERFAMILY SSF56935 18 1027 2.59E-90 T 13-10-2018 BEN78_04595 7c911a2b55be953c07074c679895cab5 408 SMART SM01154 35 404 2.2E-124 T 13-10-2018 IPR012548 Protein of unknown function DUF1704 BEN78_04595 7c911a2b55be953c07074c679895cab5 408 Pfam PF08014 Domain of unknown function (DUF1704) 42 401 1.6E-113 T 13-10-2018 IPR012548 Protein of unknown function DUF1704 BEN78_04455 e1a7ac791c25eee66ef0f0bff1b2b6fc 678 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 151 5.0E-16 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_04455 e1a7ac791c25eee66ef0f0bff1b2b6fc 678 Pfam PF00593 TonB dependent receptor 368 677 1.5E-31 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_04455 e1a7ac791c25eee66ef0f0bff1b2b6fc 678 SUPERFAMILY SSF56935 25 677 1.32E-87 T 13-10-2018 BEN78_04455 e1a7ac791c25eee66ef0f0bff1b2b6fc 678 Gene3D G3DSA:2.40.170.20 165 677 3.9E-65 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_04455 e1a7ac791c25eee66ef0f0bff1b2b6fc 678 Gene3D G3DSA:2.170.130.10 30 157 8.4E-17 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_15040 a3f494ae8ff3afb23021c9637dc7241e 410 Pfam PF07690 Major Facilitator Superfamily 32 339 8.9E-24 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN78_15040 a3f494ae8ff3afb23021c9637dc7241e 410 SUPERFAMILY SSF103473 25 404 7.06E-42 T 13-10-2018 IPR036259 MFS transporter superfamily BEN78_15040 a3f494ae8ff3afb23021c9637dc7241e 410 Gene3D G3DSA:1.20.1250.20 24 403 1.2E-36 T 13-10-2018 BEN78_03450 29ba7284b7f15c25cbd9e13b133bad80 265 Pfam PF04402 Protein of unknown function (DUF541) 36 214 7.1E-27 T 13-10-2018 IPR007497 Protein of unknown function DUF541 BEN78_03450 29ba7284b7f15c25cbd9e13b133bad80 265 Gene3D G3DSA:3.30.110.170 36 194 1.9E-22 T 13-10-2018 BEN78_03450 29ba7284b7f15c25cbd9e13b133bad80 265 Gene3D G3DSA:3.30.70.2970 46 152 1.9E-22 T 13-10-2018 BEN78_12085 69ca019f32dcaf829d19c8b095310381 288 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 5 277 7.0E-87 T 13-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 BEN78_12085 69ca019f32dcaf829d19c8b095310381 288 Gene3D G3DSA:3.40.50.620 1 179 6.5E-69 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_12085 69ca019f32dcaf829d19c8b095310381 288 Pfam PF02569 Pantoate-beta-alanine ligase 5 277 1.1E-93 T 13-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 BEN78_12085 69ca019f32dcaf829d19c8b095310381 288 Gene3D G3DSA:3.30.1300.10 180 287 2.5E-27 T 13-10-2018 BEN78_12085 69ca019f32dcaf829d19c8b095310381 288 Hamap MF_00158 Pantothenate synthetase [panC]. 3 279 37.791 T 13-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 BEN78_12085 69ca019f32dcaf829d19c8b095310381 288 SUPERFAMILY SSF52374 4 279 1.29E-95 T 13-10-2018 BEN78_15735 01750c00b6ff9987e0b0b852ec7b588f 723 SUPERFAMILY SSF55486 44 709 9.43E-172 T 13-10-2018 BEN78_15735 01750c00b6ff9987e0b0b852ec7b588f 723 Pfam PF01432 Peptidase family M3 262 711 1.5E-121 T 13-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 BEN78_15735 01750c00b6ff9987e0b0b852ec7b588f 723 Gene3D G3DSA:1.10.1370.10 175 646 1.8E-238 T 13-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 BEN78_15735 01750c00b6ff9987e0b0b852ec7b588f 723 Gene3D G3DSA:1.10.1370.40 64 708 1.8E-238 T 13-10-2018 BEN78_02150 1758c326a89964c59db40f64ba323ca0 293 Pfam PF02567 Phenazine biosynthesis-like protein 9 271 4.7E-53 T 13-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 BEN78_02150 1758c326a89964c59db40f64ba323ca0 293 Gene3D G3DSA:3.10.310.10 8 285 1.6E-71 T 13-10-2018 BEN78_02150 1758c326a89964c59db40f64ba323ca0 293 Gene3D G3DSA:3.10.310.10 129 284 1.6E-71 T 13-10-2018 BEN78_02150 1758c326a89964c59db40f64ba323ca0 293 PIRSF PIRSF016184 1 292 6.0E-72 T 13-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 BEN78_02150 1758c326a89964c59db40f64ba323ca0 293 SUPERFAMILY SSF54506 4 290 3.4E-62 T 13-10-2018 BEN78_02150 1758c326a89964c59db40f64ba323ca0 293 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 5 275 1.1E-53 T 13-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 BEN78_05400 ba362c21142853a99ee92d830a8039e4 418 Gene3D G3DSA:3.40.50.460 139 385 1.1E-137 T 13-10-2018 BEN78_05400 ba362c21142853a99ee92d830a8039e4 418 PIRSF PIRSF036483 2 417 8.0E-198 T 13-10-2018 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00010+2.7.1.90|KEGG: 00030+2.7.1.90|KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 BEN78_05400 ba362c21142853a99ee92d830a8039e4 418 Gene3D G3DSA:3.40.50.450 6 398 1.1E-137 T 13-10-2018 BEN78_05400 ba362c21142853a99ee92d830a8039e4 418 SUPERFAMILY SSF53784 7 399 3.53E-99 T 13-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BEN78_05400 ba362c21142853a99ee92d830a8039e4 418 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 134 151 8.6E-11 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BEN78_05400 ba362c21142853a99ee92d830a8039e4 418 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 33 46 8.6E-11 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BEN78_05400 ba362c21142853a99ee92d830a8039e4 418 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 176 192 8.6E-11 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BEN78_05400 ba362c21142853a99ee92d830a8039e4 418 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 8 27 8.6E-11 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BEN78_05400 ba362c21142853a99ee92d830a8039e4 418 Pfam PF00365 Phosphofructokinase 10 321 1.0E-45 T 13-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BEN78_05400 ba362c21142853a99ee92d830a8039e4 418 Hamap MF_01978 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 3 398 43.766 T 13-10-2018 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00010+2.7.1.90|KEGG: 00030+2.7.1.90|KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 BEN78_00625 960748cdd0fa6a03e41886e9aa936022 402 TIGRFAM TIGR00261 traB: TraB family protein 24 397 4.8E-79 T 13-10-2018 IPR005230 Pheromone shutdown, TraB, bacterial/archaeal BEN78_00625 960748cdd0fa6a03e41886e9aa936022 402 Pfam PF01963 TraB family 17 238 6.3E-25 T 13-10-2018 IPR002816 Pheromone shutdown, TraB BEN78_16775 281a2482b915dcb0f2f61caedad538b1 264 SUPERFAMILY SSF56112 49 149 4.79E-8 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily BEN78_16775 281a2482b915dcb0f2f61caedad538b1 264 Gene3D G3DSA:1.10.510.10 89 200 2.6E-5 T 13-10-2018 BEN78_02695 5f57f2d6f81a52e93ef20c3c17e41d81 226 Pfam PF04055 Radical SAM superfamily 40 117 1.1E-13 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BEN78_02695 5f57f2d6f81a52e93ef20c3c17e41d81 226 SUPERFAMILY SSF102114 41 117 2.88E-15 T 13-10-2018 BEN78_02695 5f57f2d6f81a52e93ef20c3c17e41d81 226 TIGRFAM TIGR04349 rSAM_QueE_gams: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 17 226 8.0E-111 T 13-10-2018 IPR027621 Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE BEN78_02695 5f57f2d6f81a52e93ef20c3c17e41d81 226 PIRSF PIRSF000370 15 226 1.1E-65 T 13-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 BEN78_02695 5f57f2d6f81a52e93ef20c3c17e41d81 226 Gene3D G3DSA:3.20.20.70 17 220 3.4E-34 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_02695 5f57f2d6f81a52e93ef20c3c17e41d81 226 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 17 223 35.381 T 13-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 BEN78_02695 5f57f2d6f81a52e93ef20c3c17e41d81 226 Pfam PF13394 4Fe-4S single cluster domain 38 119 9.8E-10 T 13-10-2018 BEN78_08565 df165959478f882cf890ac73b92db7b4 371 SUPERFAMILY SSF109604 127 343 1.1E-37 T 13-10-2018 BEN78_08565 df165959478f882cf890ac73b92db7b4 371 Gene3D G3DSA:3.40.50.2300 15 120 1.0E-6 T 13-10-2018 BEN78_08565 df165959478f882cf890ac73b92db7b4 371 PIRSF PIRSF036883 1 367 1.8E-100 T 13-10-2018 IPR014626 Signal transduction response regulator with modified HD-GYP domain, putative BEN78_08565 df165959478f882cf890ac73b92db7b4 371 Pfam PF08668 HDOD domain 135 314 2.7E-26 T 13-10-2018 IPR013976 Metal-dependent hydrolase HDOD BEN78_08565 df165959478f882cf890ac73b92db7b4 371 SUPERFAMILY SSF52172 27 122 5.27E-8 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_08565 df165959478f882cf890ac73b92db7b4 371 Gene3D G3DSA:1.10.3210.10 121 357 1.9E-42 T 13-10-2018 BEN78_15550 b46d5ba24efe19e71a321ffca9f50840 309 SUPERFAMILY SSF103481 51 151 3.14E-14 T 13-10-2018 BEN78_15550 b46d5ba24efe19e71a321ffca9f50840 309 Pfam PF00892 EamA-like transporter family 159 280 3.1E-15 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BEN78_15550 b46d5ba24efe19e71a321ffca9f50840 309 Pfam PF00892 EamA-like transporter family 17 148 4.6E-16 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BEN78_15550 b46d5ba24efe19e71a321ffca9f50840 309 SUPERFAMILY SSF103481 191 287 4.05E-16 T 13-10-2018 BEN78_13495 51488dcdd812e352246e6c600e0bc97e 132 Gene3D G3DSA:3.10.450.50 2 129 1.6E-34 T 13-10-2018 BEN78_13495 51488dcdd812e352246e6c600e0bc97e 132 Pfam PF12893 Putative lumazine-binding 10 125 2.8E-35 T 13-10-2018 IPR039437 Putative lumazine-binding BEN78_13495 51488dcdd812e352246e6c600e0bc97e 132 SUPERFAMILY SSF54427 8 127 2.14E-36 T 13-10-2018 IPR032710 NTF2-like domain superfamily BEN78_07790 dea7bdfb13d5483b510880994eeb1273 142 Pfam PF13670 Peptidase propeptide and YPEB domain 9 77 6.5E-13 T 13-10-2018 IPR025711 PepSY domain BEN78_07790 dea7bdfb13d5483b510880994eeb1273 142 Pfam PF13670 Peptidase propeptide and YPEB domain 85 139 1.7E-11 T 13-10-2018 IPR025711 PepSY domain BEN78_08695 d9f7727b80dfdbdcb2f614226e80e699 394 Gene3D G3DSA:3.20.20.450 134 360 4.5E-17 T 13-10-2018 IPR035919 EAL domain superfamily BEN78_08695 d9f7727b80dfdbdcb2f614226e80e699 394 SUPERFAMILY SSF141868 189 310 1.19E-13 T 13-10-2018 IPR035919 EAL domain superfamily BEN78_08695 d9f7727b80dfdbdcb2f614226e80e699 394 Pfam PF00563 EAL domain 143 340 1.1E-14 T 13-10-2018 IPR001633 EAL domain BEN78_07020 54a11a18054ccd1aae3725ba2a97dcac 180 SUPERFAMILY SSF52309 38 137 5.04E-5 T 13-10-2018 BEN78_07020 54a11a18054ccd1aae3725ba2a97dcac 180 Pfam PF15891 Nucleoside 2-deoxyribosyltransferase like 38 141 1.4E-31 T 13-10-2018 IPR039470 Nucleoside 2-deoxyribosyltransferase-like BEN78_07020 54a11a18054ccd1aae3725ba2a97dcac 180 Gene3D G3DSA:3.40.50.450 19 170 7.0E-48 T 13-10-2018 BEN78_15050 a08c18cdd5d08b746d6222f65adeb438 486 Gene3D G3DSA:2.20.200.10 109 354 1.6E-105 T 13-10-2018 BEN78_15050 a08c18cdd5d08b746d6222f65adeb438 486 Pfam PF02321 Outer membrane efflux protein 284 463 5.9E-21 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BEN78_15050 a08c18cdd5d08b746d6222f65adeb438 486 Pfam PF02321 Outer membrane efflux protein 72 253 1.6E-25 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BEN78_15050 a08c18cdd5d08b746d6222f65adeb438 486 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 20 463 1.7E-86 T 13-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 BEN78_15050 a08c18cdd5d08b746d6222f65adeb438 486 Gene3D G3DSA:1.20.1600.10 62 464 1.6E-105 T 13-10-2018 BEN78_15050 a08c18cdd5d08b746d6222f65adeb438 486 SUPERFAMILY SSF56954 14 463 7.19E-84 T 13-10-2018 BEN78_13580 fcab59543ee1bd54fe971dcd132f42b2 174 Pfam PF11259 Protein of unknown function (DUF3060) 115 170 1.2E-8 T 13-10-2018 IPR021417 Protein of unknown function DUF3060 BEN78_15350 edb74c2edc105bf5e431cd007252c7ec 146 Gene3D G3DSA:3.90.1010.10 11 145 1.9E-45 T 13-10-2018 BEN78_15350 edb74c2edc105bf5e431cd007252c7ec 146 SUPERFAMILY SSF82649 16 143 1.31E-40 T 13-10-2018 BEN78_15350 edb74c2edc105bf5e431cd007252c7ec 146 Pfam PF02657 Fe-S metabolism associated domain 21 138 5.4E-42 T 13-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like BEN78_06870 e5f28b58189f48c5d0480e630102749a 560 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 5 446 3.7E-173 T 13-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 BEN78_06870 e5f28b58189f48c5d0480e630102749a 560 Pfam PF03109 ABC1 family 110 231 3.7E-28 T 13-10-2018 IPR004147 UbiB domain BEN78_06870 e5f28b58189f48c5d0480e630102749a 560 SUPERFAMILY SSF56112 92 437 9.04E-33 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily BEN78_00430 58f512b1425eaed765ea47ee0575f73e 414 Gene3D G3DSA:3.40.50.2000 17 209 8.4E-28 T 13-10-2018 BEN78_00430 58f512b1425eaed765ea47ee0575f73e 414 SUPERFAMILY SSF53756 21 391 7.54E-71 T 13-10-2018 BEN78_00430 58f512b1425eaed765ea47ee0575f73e 414 Gene3D G3DSA:3.40.50.2000 210 376 4.1E-35 T 13-10-2018 BEN78_00430 58f512b1425eaed765ea47ee0575f73e 414 Pfam PF13692 Glycosyl transferases group 1 225 360 4.1E-25 T 13-10-2018 BEN78_00430 58f512b1425eaed765ea47ee0575f73e 414 Pfam PF13439 Glycosyltransferase Family 4 34 201 2.6E-22 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 BEN78_03855 e5f1459400ead9b1afb033e0ad4970a8 715 Pfam PF00326 Prolyl oligopeptidase family 489 704 1.5E-66 T 13-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 BEN78_03855 e5f1459400ead9b1afb033e0ad4970a8 715 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 499 523 4.1E-49 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BEN78_03855 e5f1459400ead9b1afb033e0ad4970a8 715 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 527 546 4.1E-49 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BEN78_03855 e5f1459400ead9b1afb033e0ad4970a8 715 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 615 630 4.1E-49 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BEN78_03855 e5f1459400ead9b1afb033e0ad4970a8 715 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 473 491 4.1E-49 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BEN78_03855 e5f1459400ead9b1afb033e0ad4970a8 715 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 633 655 4.1E-49 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BEN78_03855 e5f1459400ead9b1afb033e0ad4970a8 715 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 557 577 4.1E-49 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BEN78_03855 e5f1459400ead9b1afb033e0ad4970a8 715 Gene3D G3DSA:3.40.50.1820 34 699 2.6E-258 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_03855 e5f1459400ead9b1afb033e0ad4970a8 715 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 15 431 4.5E-117 T 13-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 BEN78_03855 e5f1459400ead9b1afb033e0ad4970a8 715 SUPERFAMILY SSF53474 441 703 7.67E-43 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_03855 e5f1459400ead9b1afb033e0ad4970a8 715 SUPERFAMILY SSF50993 11 435 4.97E-85 T 13-10-2018 BEN78_03855 e5f1459400ead9b1afb033e0ad4970a8 715 Gene3D G3DSA:2.130.10.120 85 432 2.6E-258 T 13-10-2018 BEN78_16235 be90128feb4400e94d36f32768d15304 401 Pfam PF00089 Trypsin 231 377 2.4E-7 T 13-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 BEN78_16235 be90128feb4400e94d36f32768d15304 401 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 340 351 - T 13-10-2018 IPR033116 Serine proteases, trypsin family, serine active site BEN78_16235 be90128feb4400e94d36f32768d15304 401 SUPERFAMILY SSF54806 127 199 7.85E-8 T 13-10-2018 IPR037295 Alpha-lytic protease prodomain BEN78_16235 be90128feb4400e94d36f32768d15304 401 Gene3D G3DSA:2.40.10.10 217 397 5.0E-62 T 13-10-2018 BEN78_16235 be90128feb4400e94d36f32768d15304 401 PRINTS PR00861 Alpha-lytic endopeptidase serine protease (S2A) signature 291 311 1.7E-32 T 13-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 BEN78_16235 be90128feb4400e94d36f32768d15304 401 PRINTS PR00861 Alpha-lytic endopeptidase serine protease (S2A) signature 312 329 1.7E-32 T 13-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 BEN78_16235 be90128feb4400e94d36f32768d15304 401 PRINTS PR00861 Alpha-lytic endopeptidase serine protease (S2A) signature 231 245 1.7E-32 T 13-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 BEN78_16235 be90128feb4400e94d36f32768d15304 401 PRINTS PR00861 Alpha-lytic endopeptidase serine protease (S2A) signature 356 370 1.7E-32 T 13-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 BEN78_16235 be90128feb4400e94d36f32768d15304 401 PRINTS PR00861 Alpha-lytic endopeptidase serine protease (S2A) signature 331 354 1.7E-32 T 13-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 BEN78_16235 be90128feb4400e94d36f32768d15304 401 SUPERFAMILY SSF54806 47 126 4.45E-7 T 13-10-2018 IPR037295 Alpha-lytic protease prodomain BEN78_16235 be90128feb4400e94d36f32768d15304 401 Gene3D G3DSA:2.40.10.10 278 386 5.0E-62 T 13-10-2018 BEN78_16235 be90128feb4400e94d36f32768d15304 401 PIRSF PIRSF001134 2 401 2.5E-91 T 13-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 BEN78_16235 be90128feb4400e94d36f32768d15304 401 Gene3D G3DSA:3.30.300.50 126 201 6.6E-26 T 13-10-2018 IPR035070 Streptogrisin prodomain BEN78_16235 be90128feb4400e94d36f32768d15304 401 SUPERFAMILY SSF50494 214 381 3.96E-27 T 13-10-2018 IPR009003 Peptidase S1, PA clan BEN78_16235 be90128feb4400e94d36f32768d15304 401 Pfam PF02983 Alpha-lytic protease prodomain 127 190 1.8E-9 T 13-10-2018 IPR004236 Peptidase S1A, alpha-lytic prodomain GO:0005576|GO:0006508|GO:0008236 BEN78_16235 be90128feb4400e94d36f32768d15304 401 Gene3D G3DSA:3.30.300.50 41 125 6.9E-25 T 13-10-2018 IPR035070 Streptogrisin prodomain BEN78_07585 c3730d1cf8c440b0bacf9d07559306cd 219 SUPERFAMILY SSF53271 4 213 1.84E-45 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like BEN78_07585 c3730d1cf8c440b0bacf9d07559306cd 219 Gene3D G3DSA:3.40.50.2020 1 216 1.7E-67 T 13-10-2018 BEN78_07585 c3730d1cf8c440b0bacf9d07559306cd 219 Pfam PF00156 Phosphoribosyl transferase domain 42 163 4.0E-14 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 BEN78_07585 c3730d1cf8c440b0bacf9d07559306cd 219 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 11 189 1.9E-56 T 13-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BEN78_07585 c3730d1cf8c440b0bacf9d07559306cd 219 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 219 30.74 T 13-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BEN78_16220 4602ed5c3186c2df5888bb8ecab28072 226 SUPERFAMILY SSF53335 33 223 1.27E-27 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_16220 4602ed5c3186c2df5888bb8ecab28072 226 Gene3D G3DSA:3.40.50.150 11 226 9.4E-36 T 13-10-2018 BEN78_16220 4602ed5c3186c2df5888bb8ecab28072 226 Pfam PF13649 Methyltransferase domain 50 143 1.2E-11 T 13-10-2018 BEN78_05080 d74e22a4f65cb6517e1cd7a49d1bef77 879 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 45 878 9.6E-210 T 13-10-2018 IPR010104 Bacterial TonB-dependent receptor BEN78_05080 d74e22a4f65cb6517e1cd7a49d1bef77 879 Pfam PF00593 TonB dependent receptor 411 878 2.8E-40 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_05080 d74e22a4f65cb6517e1cd7a49d1bef77 879 SUPERFAMILY SSF56935 39 878 4.48E-86 T 13-10-2018 BEN78_05080 d74e22a4f65cb6517e1cd7a49d1bef77 879 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 164 8.5E-13 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_05080 d74e22a4f65cb6517e1cd7a49d1bef77 879 Gene3D G3DSA:2.170.130.10 49 168 1.1E-10 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_04540 61f82375026ed53ecc6a7c8066b8a3fc 146 SMART SM00448 5 129 8.0E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_04540 61f82375026ed53ecc6a7c8066b8a3fc 146 SUPERFAMILY SSF52172 6 141 1.71E-31 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_04540 61f82375026ed53ecc6a7c8066b8a3fc 146 Pfam PF00072 Response regulator receiver domain 7 129 3.5E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_04540 61f82375026ed53ecc6a7c8066b8a3fc 146 Gene3D G3DSA:3.40.50.2300 4 146 1.5E-35 T 13-10-2018 BEN78_00955 843966c9a83286ea4e2cd2d1d99187a1 237 SUPERFAMILY SSF64005 1 216 3.4E-73 T 13-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 BEN78_00955 843966c9a83286ea4e2cd2d1d99187a1 237 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 166 183 - T 13-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 BEN78_00955 843966c9a83286ea4e2cd2d1d99187a1 237 Gene3D G3DSA:3.40.1180.10 1 221 2.3E-79 T 13-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 BEN78_00955 843966c9a83286ea4e2cd2d1d99187a1 237 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 1 221 33.631 T 13-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 BEN78_00955 843966c9a83286ea4e2cd2d1d99187a1 237 Pfam PF01255 Putative undecaprenyl diphosphate synthase 1 220 3.5E-70 T 13-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 BEN78_00955 843966c9a83286ea4e2cd2d1d99187a1 237 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 1 220 1.3E-74 T 13-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 BEN78_06465 ec72996413ff75c9836010f5d1479bf2 393 Pfam PF12698 ABC-2 family transporter protein 24 382 2.2E-23 T 13-10-2018 BEN78_07630 4dca715e8980f301fbc3812eefdb8a1e 291 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 7 264 1.5E-26 T 13-10-2018 IPR017039 Virulence factor BrkB BEN78_07630 4dca715e8980f301fbc3812eefdb8a1e 291 PIRSF PIRSF035875 4 284 8.7E-58 T 13-10-2018 IPR017039 Virulence factor BrkB BEN78_07630 4dca715e8980f301fbc3812eefdb8a1e 291 Pfam PF03631 Virulence factor BrkB 16 265 4.8E-49 T 13-10-2018 IPR017039 Virulence factor BrkB BEN78_08270 762d2534d5a9b48d63e465991273f36f 408 Gene3D G3DSA:1.20.1250.20 224 403 5.7E-16 T 13-10-2018 BEN78_08270 762d2534d5a9b48d63e465991273f36f 408 Gene3D G3DSA:1.20.1250.20 22 206 6.9E-20 T 13-10-2018 BEN78_08270 762d2534d5a9b48d63e465991273f36f 408 Pfam PF07690 Major Facilitator Superfamily 32 276 6.6E-22 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN78_08270 762d2534d5a9b48d63e465991273f36f 408 SUPERFAMILY SSF103473 1 401 1.7E-52 T 13-10-2018 IPR036259 MFS transporter superfamily BEN78_01540 a5526e261955af59c318fde9d3da2246 385 SUPERFAMILY SSF111369 54 291 5.89E-64 T 13-10-2018 BEN78_01540 a5526e261955af59c318fde9d3da2246 385 Gene3D G3DSA:1.10.287.470 100 166 2.8E-83 T 13-10-2018 BEN78_01540 a5526e261955af59c318fde9d3da2246 385 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 287 7.9E-13 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BEN78_01540 a5526e261955af59c318fde9d3da2246 385 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 363 5.0E-72 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BEN78_01540 a5526e261955af59c318fde9d3da2246 385 Gene3D G3DSA:2.40.50.100 65 209 2.8E-83 T 13-10-2018 BEN78_01540 a5526e261955af59c318fde9d3da2246 385 Gene3D G3DSA:2.40.30.170 53 297 2.8E-83 T 13-10-2018 BEN78_01540 a5526e261955af59c318fde9d3da2246 385 Gene3D G3DSA:2.40.420.20 298 363 2.8E-83 T 13-10-2018 BEN78_16795 f4769e9cc0ab0aa34eed46ad14dd00ec 192 Pfam PF02545 Maf-like protein 5 186 2.8E-44 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 BEN78_16795 f4769e9cc0ab0aa34eed46ad14dd00ec 192 Hamap MF_00528 Septum formation protein Maf [maf]. 4 191 28.128 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 BEN78_16795 f4769e9cc0ab0aa34eed46ad14dd00ec 192 SUPERFAMILY SSF52972 3 186 7.19E-55 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like BEN78_16795 f4769e9cc0ab0aa34eed46ad14dd00ec 192 PIRSF PIRSF006305 1 191 2.0E-39 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 BEN78_16795 f4769e9cc0ab0aa34eed46ad14dd00ec 192 TIGRFAM TIGR00172 maf: septum formation protein Maf 1 185 2.5E-45 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 BEN78_16795 f4769e9cc0ab0aa34eed46ad14dd00ec 192 Gene3D G3DSA:3.90.950.10 4 191 3.6E-56 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like BEN78_01795 bed76dc33d47a90fe0db7d00576386f7 369 Gene3D G3DSA:2.60.40.420 175 354 5.4E-50 T 13-10-2018 IPR008972 Cupredoxin BEN78_01795 bed76dc33d47a90fe0db7d00576386f7 369 SUPERFAMILY SSF49503 183 348 3.09E-70 T 13-10-2018 IPR008972 Cupredoxin BEN78_01795 bed76dc33d47a90fe0db7d00576386f7 369 Gene3D G3DSA:2.60.40.420 17 174 1.0E-38 T 13-10-2018 IPR008972 Cupredoxin BEN78_01795 bed76dc33d47a90fe0db7d00576386f7 369 Pfam PF00394 Multicopper oxidase 191 339 1.5E-16 T 13-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 BEN78_01795 bed76dc33d47a90fe0db7d00576386f7 369 SUPERFAMILY SSF49503 26 183 3.47E-37 T 13-10-2018 IPR008972 Cupredoxin BEN78_01795 bed76dc33d47a90fe0db7d00576386f7 369 Pfam PF07732 Multicopper oxidase 70 175 9.2E-10 T 13-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 BEN78_01795 bed76dc33d47a90fe0db7d00576386f7 369 TIGRFAM TIGR02376 Cu_nitrite_red: nitrite reductase, copper-containing 28 350 2.4E-150 T 13-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 BEN78_01795 bed76dc33d47a90fe0db7d00576386f7 369 PRINTS PR00695 Copper containing nitrite reductase signature 157 173 1.8E-56 T 13-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 BEN78_01795 bed76dc33d47a90fe0db7d00576386f7 369 PRINTS PR00695 Copper containing nitrite reductase signature 51 69 1.8E-56 T 13-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 BEN78_01795 bed76dc33d47a90fe0db7d00576386f7 369 PRINTS PR00695 Copper containing nitrite reductase signature 138 153 1.8E-56 T 13-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 BEN78_01795 bed76dc33d47a90fe0db7d00576386f7 369 PRINTS PR00695 Copper containing nitrite reductase signature 78 94 1.8E-56 T 13-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 BEN78_01795 bed76dc33d47a90fe0db7d00576386f7 369 PRINTS PR00695 Copper containing nitrite reductase signature 96 113 1.8E-56 T 13-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 BEN78_01795 bed76dc33d47a90fe0db7d00576386f7 369 PRINTS PR00695 Copper containing nitrite reductase signature 113 132 1.8E-56 T 13-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 BEN78_00050 a414c846358264a6a44efa477c6b46c6 269 Pfam PF01226 Formate/nitrite transporter 14 262 8.4E-65 T 13-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 BEN78_00050 a414c846358264a6a44efa477c6b46c6 269 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 82 91 - T 13-10-2018 IPR024002 Formate/nitrite transporter, conserved site BEN78_00050 a414c846358264a6a44efa477c6b46c6 269 Gene3D G3DSA:1.20.1080.10 5 256 1.5E-73 T 13-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 BEN78_00050 a414c846358264a6a44efa477c6b46c6 269 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 167 177 - T 13-10-2018 IPR024002 Formate/nitrite transporter, conserved site BEN78_02815 06c38bc17d3e82e3da7548b85acb2560 270 Gene3D G3DSA:1.10.10.60 160 221 2.9E-13 T 13-10-2018 BEN78_02815 06c38bc17d3e82e3da7548b85acb2560 270 SMART SM00342 178 260 2.5E-29 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BEN78_02815 06c38bc17d3e82e3da7548b85acb2560 270 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 215 256 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BEN78_02815 06c38bc17d3e82e3da7548b85acb2560 270 SUPERFAMILY SSF46689 162 212 1.06E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN78_02815 06c38bc17d3e82e3da7548b85acb2560 270 SUPERFAMILY SSF46689 214 263 2.93E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN78_02815 06c38bc17d3e82e3da7548b85acb2560 270 Gene3D G3DSA:1.10.10.60 222 266 8.1E-10 T 13-10-2018 BEN78_02815 06c38bc17d3e82e3da7548b85acb2560 270 Pfam PF12852 Cupin 29 147 1.1E-18 T 13-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain BEN78_02815 06c38bc17d3e82e3da7548b85acb2560 270 Pfam PF12833 Helix-turn-helix domain 184 261 3.1E-20 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BEN78_00115 4a2f9da09c9835617e40bb95d3071dc8 102 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 99 2.0E-17 T 13-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family BEN78_00115 4a2f9da09c9835617e40bb95d3071dc8 102 Gene3D G3DSA:3.30.2310.20 2 101 9.2E-13 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily BEN78_04435 798ce1168759668ffd2747020732dc34 1477 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1288 1351 1.8E-21 T 13-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 BEN78_04435 798ce1168759668ffd2747020732dc34 1477 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 819 857 1.9E-4 T 13-10-2018 IPR006530 YD repeat BEN78_04435 798ce1168759668ffd2747020732dc34 1477 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 540 562 0.0014 T 13-10-2018 IPR006530 YD repeat BEN78_04435 798ce1168759668ffd2747020732dc34 1477 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 862 897 0.0017 T 13-10-2018 IPR006530 YD repeat BEN78_04435 798ce1168759668ffd2747020732dc34 1477 Pfam PF05593 RHS Repeat 819 855 2.7E-7 T 13-10-2018 IPR031325 RHS repeat BEN78_04435 798ce1168759668ffd2747020732dc34 1477 Gene3D G3DSA:2.180.10.10 1095 1351 7.5E-24 T 13-10-2018 BEN78_04435 798ce1168759668ffd2747020732dc34 1477 Gene3D G3DSA:3.90.930.1 766 908 9.2E-10 T 13-10-2018 BEN78_04370 ca314c2bffca985e6fe219978bcacf0c 259 Gene3D G3DSA:3.60.10.10 1 256 3.7E-73 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BEN78_04370 ca314c2bffca985e6fe219978bcacf0c 259 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 248 5.2E-21 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase BEN78_04370 ca314c2bffca985e6fe219978bcacf0c 259 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 255 6.0E-79 T 13-10-2018 BEN78_04370 ca314c2bffca985e6fe219978bcacf0c 259 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 13-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 BEN78_04370 ca314c2bffca985e6fe219978bcacf0c 259 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 255 5.6E-73 T 13-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 BEN78_04370 ca314c2bffca985e6fe219978bcacf0c 259 SUPERFAMILY SSF56219 1 257 4.84E-77 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BEN78_10245 ca8399356d41d63f79c3ed9099b72f30 115 TIGRFAM TIGR02222 chap_CsaA: export-related chaperone protein CsaA 9 114 8.1E-47 T 13-10-2018 IPR008231 Probable chaperone CsaA BEN78_10245 ca8399356d41d63f79c3ed9099b72f30 115 Gene3D G3DSA:2.40.50.140 3 115 4.7E-33 T 13-10-2018 BEN78_10245 ca8399356d41d63f79c3ed9099b72f30 115 SUPERFAMILY SSF50249 7 114 4.9E-33 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN78_10245 ca8399356d41d63f79c3ed9099b72f30 115 Pfam PF01588 Putative tRNA binding domain 17 113 3.2E-16 T 13-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 BEN78_14300 3e2bcc950c3676c1636a052f27ae9ef0 369 Gene3D G3DSA:3.10.310.10 8 352 7.9E-121 T 13-10-2018 BEN78_14300 3e2bcc950c3676c1636a052f27ae9ef0 369 Gene3D G3DSA:3.10.310.10 170 338 7.9E-121 T 13-10-2018 BEN78_14300 3e2bcc950c3676c1636a052f27ae9ef0 369 SUPERFAMILY SSF54506 5 171 4.16E-64 T 13-10-2018 BEN78_14300 3e2bcc950c3676c1636a052f27ae9ef0 369 Pfam PF04303 PrpF protein 7 353 6.7E-133 T 13-10-2018 IPR007400 PrpF protein BEN78_14300 3e2bcc950c3676c1636a052f27ae9ef0 369 SUPERFAMILY SSF54506 175 354 4.39E-55 T 13-10-2018 BEN78_08025 a735396b834421f8539cd27ddf840f69 216 Pfam PF03350 Uncharacterized protein family, UPF0114 18 134 2.0E-40 T 13-10-2018 IPR005134 Uncharacterised protein family UPF0114 BEN78_08025 a735396b834421f8539cd27ddf840f69 216 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 15 206 1.7E-54 T 13-10-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria BEN78_08025 a735396b834421f8539cd27ddf840f69 216 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 213 78.302 T 13-10-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria BEN78_00370 6028c93d547f540381a31898ea851de7 165 Gene3D G3DSA:1.20.1260.10 1 165 3.1E-63 T 13-10-2018 IPR012347 Ferritin-like BEN78_00370 6028c93d547f540381a31898ea851de7 165 Pfam PF05974 Domain of unknown function (DUF892) 5 162 2.3E-60 T 13-10-2018 IPR010287 Domain of unknown function DUF892 BEN78_00370 6028c93d547f540381a31898ea851de7 165 SUPERFAMILY SSF47240 1 154 1.39E-54 T 13-10-2018 IPR009078 Ferritin-like superfamily BEN78_15675 499b6f9e7f1ead3b9c7855f28b91fe09 382 PRINTS PR01486 Bacterial phospholipase A1 protein signature 190 206 3.1E-29 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 BEN78_15675 499b6f9e7f1ead3b9c7855f28b91fe09 382 PRINTS PR01486 Bacterial phospholipase A1 protein signature 168 185 3.1E-29 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 BEN78_15675 499b6f9e7f1ead3b9c7855f28b91fe09 382 PRINTS PR01486 Bacterial phospholipase A1 protein signature 293 311 3.1E-29 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 BEN78_15675 499b6f9e7f1ead3b9c7855f28b91fe09 382 PRINTS PR01486 Bacterial phospholipase A1 protein signature 351 371 3.1E-29 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 BEN78_15675 499b6f9e7f1ead3b9c7855f28b91fe09 382 PRINTS PR01486 Bacterial phospholipase A1 protein signature 329 346 3.1E-29 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 BEN78_15675 499b6f9e7f1ead3b9c7855f28b91fe09 382 PRINTS PR01486 Bacterial phospholipase A1 protein signature 259 277 3.1E-29 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 BEN78_15675 499b6f9e7f1ead3b9c7855f28b91fe09 382 PRINTS PR01486 Bacterial phospholipase A1 protein signature 213 232 3.1E-29 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 BEN78_15675 499b6f9e7f1ead3b9c7855f28b91fe09 382 SUPERFAMILY SSF56931 118 382 7.59E-92 T 13-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 BEN78_15675 499b6f9e7f1ead3b9c7855f28b91fe09 382 Pfam PF02253 Phospholipase A1 116 378 1.0E-102 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 BEN78_15675 499b6f9e7f1ead3b9c7855f28b91fe09 382 Gene3D G3DSA:2.40.230.10 118 382 2.4E-90 T 13-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 BEN78_09225 2edcc7f4cea2d3659471256547491a0a 404 Gene3D G3DSA:3.50.50.60 30 383 5.5E-67 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_09225 2edcc7f4cea2d3659471256547491a0a 404 Pfam PF01266 FAD dependent oxidoreductase 30 380 1.1E-52 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 BEN78_09225 2edcc7f4cea2d3659471256547491a0a 404 Gene3D G3DSA:3.30.9.10 122 344 5.5E-67 T 13-10-2018 BEN78_09225 2edcc7f4cea2d3659471256547491a0a 404 SUPERFAMILY SSF51905 29 394 1.28E-32 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_05700 dd849ae414ff573122a2fddd837c69f6 434 SUPERFAMILY SSF50939 112 375 3.92E-10 T 13-10-2018 IPR036278 Sialidase superfamily KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 BEN78_05700 dd849ae414ff573122a2fddd837c69f6 434 Gene3D G3DSA:2.120.10.10 34 172 2.3E-5 T 13-10-2018 BEN78_12640 fc4195f1a520caf14c4c0cbfa90c3a24 282 Pfam PF02666 Phosphatidylserine decarboxylase 61 277 1.5E-49 T 13-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 BEN78_12640 fc4195f1a520caf14c4c0cbfa90c3a24 282 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 47 278 1.4E-60 T 13-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 BEN78_12640 fc4195f1a520caf14c4c0cbfa90c3a24 282 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 8 280 43.872 T 13-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 BEN78_16755 f827de09bf2c7fab4d36b879258db058 412 SMART SM00825 Beta-ketoacyl synthase 6 412 5.8E-15 T 13-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BEN78_16755 f827de09bf2c7fab4d36b879258db058 412 Gene3D G3DSA:3.40.47.10 257 401 2.8E-55 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 BEN78_16755 f827de09bf2c7fab4d36b879258db058 412 SUPERFAMILY SSF53901 214 411 1.29E-73 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 BEN78_16755 f827de09bf2c7fab4d36b879258db058 412 SUPERFAMILY SSF53901 3 252 1.08E-77 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 BEN78_16755 f827de09bf2c7fab4d36b879258db058 412 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 13-10-2018 IPR018201 Beta-ketoacyl synthase, active site BEN78_16755 f827de09bf2c7fab4d36b879258db058 412 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 1.4E-38 T 13-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal BEN78_16755 f827de09bf2c7fab4d36b879258db058 412 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 410 4.2E-199 T 13-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 BEN78_16755 f827de09bf2c7fab4d36b879258db058 412 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 2.1E-59 T 13-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal BEN78_16755 f827de09bf2c7fab4d36b879258db058 412 Gene3D G3DSA:3.40.47.10 1 255 7.8E-92 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 BEN78_16755 f827de09bf2c7fab4d36b879258db058 412 PIRSF PIRSF000447 1 412 1.1E-188 T 13-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 BEN78_01630 02be3400c58a3bebbfdc01c3390e0a90 84 SUPERFAMILY SSF54862 7 70 1.54E-18 T 13-10-2018 BEN78_01630 02be3400c58a3bebbfdc01c3390e0a90 84 Pfam PF00037 4Fe-4S binding domain 7 25 5.0E-5 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BEN78_01630 02be3400c58a3bebbfdc01c3390e0a90 84 Gene3D G3DSA:3.30.70.20 2 81 8.9E-31 T 13-10-2018 BEN78_01630 02be3400c58a3bebbfdc01c3390e0a90 84 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BEN78_15680 1570035fece1df5cf0bb169464379104 384 Pfam PF04116 Fatty acid hydroxylase superfamily 205 339 2.5E-27 T 13-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 BEN78_14360 55f18d24e4bb829f9aaec6acc1035a51 188 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 8 159 29.352 T 13-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 BEN78_14360 55f18d24e4bb829f9aaec6acc1035a51 188 SUPERFAMILY SSF64438 14 159 6.23E-50 T 13-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic BEN78_14360 55f18d24e4bb829f9aaec6acc1035a51 188 Pfam PF03975 CheD chemotactic sensory transduction 55 153 9.5E-33 T 13-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 BEN78_14360 55f18d24e4bb829f9aaec6acc1035a51 188 Gene3D G3DSA:3.30.1330.200 14 166 5.3E-50 T 13-10-2018 IPR038592 CheD-like superfamily BEN78_06270 851d14dcc0c4284b171774eb2c185919 447 TIGRFAM TIGR00836 amt: ammonium transporter 49 445 1.7E-132 T 13-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 BEN78_06270 851d14dcc0c4284b171774eb2c185919 447 Gene3D G3DSA:1.10.3430.10 28 447 4.0E-138 T 13-10-2018 IPR029020 Ammonium/urea transporter BEN78_06270 851d14dcc0c4284b171774eb2c185919 447 ProSitePatterns PS01219 Ammonium transporters signature. 203 228 - T 13-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 BEN78_06270 851d14dcc0c4284b171774eb2c185919 447 PRINTS PR00342 Rhesus blood group protein signature 328 346 2.9E-9 T 13-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 BEN78_06270 851d14dcc0c4284b171774eb2c185919 447 PRINTS PR00342 Rhesus blood group protein signature 145 161 2.9E-9 T 13-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 BEN78_06270 851d14dcc0c4284b171774eb2c185919 447 PRINTS PR00342 Rhesus blood group protein signature 273 295 2.9E-9 T 13-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 BEN78_06270 851d14dcc0c4284b171774eb2c185919 447 PRINTS PR00342 Rhesus blood group protein signature 242 260 2.9E-9 T 13-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 BEN78_06270 851d14dcc0c4284b171774eb2c185919 447 SUPERFAMILY SSF111352 45 426 9.94E-122 T 13-10-2018 BEN78_06270 851d14dcc0c4284b171774eb2c185919 447 Pfam PF00909 Ammonium Transporter Family 51 445 1.7E-119 T 13-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 BEN78_10260 673b86f3b257a4d56d155607de18e779 810 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 14 766 18.6 T 13-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 BEN78_10260 673b86f3b257a4d56d155607de18e779 810 Pfam PF03968 OstA-like protein 51 176 1.1E-4 T 13-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal BEN78_10260 673b86f3b257a4d56d155607de18e779 810 Pfam PF04453 Organic solvent tolerance protein 301 705 3.5E-85 T 13-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 BEN78_10045 93a20ae6f0e201c85714d43fce2ef7f8 234 Gene3D G3DSA:3.30.420.40 94 186 1.8E-66 T 13-10-2018 BEN78_10045 93a20ae6f0e201c85714d43fce2ef7f8 234 Pfam PF00814 Glycoprotease family 28 124 3.4E-24 T 13-10-2018 IPR000905 Gcp-like domain BEN78_10045 93a20ae6f0e201c85714d43fce2ef7f8 234 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 217 1.8E-54 T 13-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 BEN78_10045 93a20ae6f0e201c85714d43fce2ef7f8 234 SUPERFAMILY SSF53067 1 101 1.68E-27 T 13-10-2018 BEN78_10045 93a20ae6f0e201c85714d43fce2ef7f8 234 Gene3D G3DSA:3.30.420.40 3 217 1.8E-66 T 13-10-2018 BEN78_10045 93a20ae6f0e201c85714d43fce2ef7f8 234 SUPERFAMILY SSF53067 109 215 1.11E-19 T 13-10-2018 BEN78_08055 eadef39523c73766adc5b2f7493a70b8 97 Pfam PF11191 Protein of unknown function (DUF2782) 33 85 1.9E-13 T 13-10-2018 IPR021357 Protein of unknown function DUF2782 BEN78_08055 eadef39523c73766adc5b2f7493a70b8 97 Gene3D G3DSA:2.20.130.30 27 97 4.9E-17 T 13-10-2018 BEN78_14485 bf656212ff08e6bdd237f9818d7e529a 257 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 231 243 - T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BEN78_14485 bf656212ff08e6bdd237f9818d7e529a 257 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 54 63 2.4E-16 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BEN78_14485 bf656212ff08e6bdd237f9818d7e529a 257 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 114 126 2.4E-16 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BEN78_14485 bf656212ff08e6bdd237f9818d7e529a 257 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 244 254 2.4E-16 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BEN78_14485 bf656212ff08e6bdd237f9818d7e529a 257 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 154 166 2.4E-16 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BEN78_14485 bf656212ff08e6bdd237f9818d7e529a 257 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 126 140 2.4E-16 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BEN78_14485 bf656212ff08e6bdd237f9818d7e529a 257 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 176 188 2.4E-16 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BEN78_14485 bf656212ff08e6bdd237f9818d7e529a 257 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 228 253 6.0E-61 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BEN78_14485 bf656212ff08e6bdd237f9818d7e529a 257 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 183 203 6.0E-61 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BEN78_14485 bf656212ff08e6bdd237f9818d7e529a 257 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 56 75 6.0E-61 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BEN78_14485 bf656212ff08e6bdd237f9818d7e529a 257 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 95 114 6.0E-61 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BEN78_14485 bf656212ff08e6bdd237f9818d7e529a 257 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 204 225 6.0E-61 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BEN78_14485 bf656212ff08e6bdd237f9818d7e529a 257 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 75 95 6.0E-61 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BEN78_14485 bf656212ff08e6bdd237f9818d7e529a 257 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 58 254 4.3E-77 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BEN78_14485 bf656212ff08e6bdd237f9818d7e529a 257 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 183 198 - T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BEN78_14485 bf656212ff08e6bdd237f9818d7e529a 257 Pfam PF00813 FliP family 58 250 4.7E-73 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BEN78_13200 1ba1c264d439b5ff7fd2f11f2cd6ab73 127 Pfam PF14534 Domain of unknown function (DUF4440) 12 113 2.8E-13 T 13-10-2018 IPR027843 Domain of unknown function DUF4440 BEN78_13200 1ba1c264d439b5ff7fd2f11f2cd6ab73 127 Gene3D G3DSA:3.10.450.50 2 120 9.4E-18 T 13-10-2018 BEN78_13200 1ba1c264d439b5ff7fd2f11f2cd6ab73 127 SUPERFAMILY SSF54427 5 120 6.15E-19 T 13-10-2018 IPR032710 NTF2-like domain superfamily BEN78_14080 3c70b9772924df4a2d89e1cf0180cd5a 231 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 87 162 7.9E-14 T 13-10-2018 IPR032030 YscD, cytoplasmic domain BEN78_14080 3c70b9772924df4a2d89e1cf0180cd5a 231 SUPERFAMILY SSF49879 15 70 5.72E-5 T 13-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 BEN78_14080 3c70b9772924df4a2d89e1cf0180cd5a 231 SUPERFAMILY SSF49879 72 172 1.2E-20 T 13-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 BEN78_14080 3c70b9772924df4a2d89e1cf0180cd5a 231 SMART SM00240 101 151 3.0E-6 T 13-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 BEN78_14080 3c70b9772924df4a2d89e1cf0180cd5a 231 Gene3D G3DSA:2.60.200.20 59 177 2.8E-21 T 13-10-2018 BEN78_16580 4fa7cc5ec8592a437ee6e594daf928ed 549 Gene3D G3DSA:3.40.50.1220 180 330 1.7E-38 T 13-10-2018 BEN78_16580 4fa7cc5ec8592a437ee6e594daf928ed 549 Gene3D G3DSA:3.40.50.970 340 537 5.4E-50 T 13-10-2018 BEN78_16580 4fa7cc5ec8592a437ee6e594daf928ed 549 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 380 525 5.4E-35 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 BEN78_16580 4fa7cc5ec8592a437ee6e594daf928ed 549 SUPERFAMILY SSF52518 357 531 5.18E-51 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold BEN78_16580 4fa7cc5ec8592a437ee6e594daf928ed 549 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 3 169 2.6E-51 T 13-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 BEN78_16580 4fa7cc5ec8592a437ee6e594daf928ed 549 Gene3D G3DSA:3.40.50.970 1 176 2.5E-57 T 13-10-2018 BEN78_16580 4fa7cc5ec8592a437ee6e594daf928ed 549 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 187 320 5.7E-31 T 13-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 BEN78_16580 4fa7cc5ec8592a437ee6e594daf928ed 549 SUPERFAMILY SSF52518 2 180 2.22E-46 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold BEN78_16580 4fa7cc5ec8592a437ee6e594daf928ed 549 SUPERFAMILY SSF52467 155 340 3.07E-40 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily BEN78_07800 a02c1e5492930e0ef495bfb1f327e6da 125 ProSitePatterns PS00018 EF-hand calcium-binding domain. 108 120 - T 13-10-2018 IPR018247 EF-Hand 1, calcium-binding site BEN78_07800 a02c1e5492930e0ef495bfb1f327e6da 125 Gene3D G3DSA:1.10.238.10 75 125 9.0E-12 T 13-10-2018 BEN78_07800 a02c1e5492930e0ef495bfb1f327e6da 125 SUPERFAMILY SSF47473 69 124 5.96E-9 T 13-10-2018 IPR011992 EF-hand domain pair BEN78_07800 a02c1e5492930e0ef495bfb1f327e6da 125 Pfam PF13202 EF hand 77 93 7.5E-5 T 13-10-2018 IPR002048 EF-hand domain GO:0005509 BEN78_07800 a02c1e5492930e0ef495bfb1f327e6da 125 Pfam PF13202 EF hand 103 120 7.1E-6 T 13-10-2018 IPR002048 EF-hand domain GO:0005509 BEN78_07070 ed2876cace45c2312b0f62f54f9d1507 390 SUPERFAMILY SSF53335 80 385 7.84E-68 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_07070 ed2876cace45c2312b0f62f54f9d1507 390 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 175 312 1.6E-17 T 13-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 BEN78_07070 ed2876cace45c2312b0f62f54f9d1507 390 Gene3D G3DSA:3.40.50.150 179 389 6.1E-68 T 13-10-2018 BEN78_07070 ed2876cace45c2312b0f62f54f9d1507 390 SUPERFAMILY SSF88697 13 70 3.11E-11 T 13-10-2018 IPR015947 PUA-like superfamily BEN78_07070 ed2876cace45c2312b0f62f54f9d1507 390 Gene3D G3DSA:3.30.750.80 73 177 2.0E-24 T 13-10-2018 BEN78_07070 ed2876cace45c2312b0f62f54f9d1507 390 Gene3D G3DSA:2.30.130.10 10 72 3.0E-17 T 13-10-2018 IPR036974 PUA domain superfamily GO:0003723 BEN78_07555 c8e655c6e00ad5e15bcfc585998878f9 373 Gene3D G3DSA:3.40.50.1820 49 352 3.2E-27 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_07555 c8e655c6e00ad5e15bcfc585998878f9 373 Pfam PF12146 Serine aminopeptidase, S33 88 303 1.2E-12 T 13-10-2018 IPR022742 Serine aminopeptidase, S33 BEN78_07555 c8e655c6e00ad5e15bcfc585998878f9 373 SUPERFAMILY SSF53474 54 328 1.61E-30 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_07555 c8e655c6e00ad5e15bcfc585998878f9 373 PIRSF PIRSF005211 11 364 6.4E-66 T 13-10-2018 IPR012020 AB hydrolase 4 family BEN78_06470 fbe6151ac4d7322c304d46c3dd48c1bd 248 Pfam PF00005 ABC transporter 22 165 3.8E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_06470 fbe6151ac4d7322c304d46c3dd48c1bd 248 SUPERFAMILY SSF52540 2 228 1.71E-60 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_06470 fbe6151ac4d7322c304d46c3dd48c1bd 248 Gene3D G3DSA:3.40.50.300 1 245 9.9E-68 T 13-10-2018 BEN78_06470 fbe6151ac4d7322c304d46c3dd48c1bd 248 SMART SM00382 30 221 7.1E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_07850 ca8987aa013153cfe0444fb1dd05058d 455 SUPERFAMILY SSF51905 16 377 1.45E-41 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_07850 ca8987aa013153cfe0444fb1dd05058d 455 Pfam PF01494 FAD binding domain 16 361 8.5E-23 T 13-10-2018 IPR002938 FAD-binding domain GO:0071949 BEN78_07850 ca8987aa013153cfe0444fb1dd05058d 455 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 17 39 3.9E-8 T 13-10-2018 BEN78_07850 ca8987aa013153cfe0444fb1dd05058d 455 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 167 182 3.9E-8 T 13-10-2018 BEN78_07850 ca8987aa013153cfe0444fb1dd05058d 455 Gene3D G3DSA:3.50.50.60 14 424 1.9E-120 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_09440 4c3df0196227847d7fb48870b7c42558 190 SUPERFAMILY SSF52540 7 180 1.18E-15 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_09440 4c3df0196227847d7fb48870b7c42558 190 Pfam PF13238 AAA domain 9 109 1.0E-7 T 13-10-2018 BEN78_09440 4c3df0196227847d7fb48870b7c42558 190 Gene3D G3DSA:3.40.50.300 4 182 8.1E-14 T 13-10-2018 BEN78_11150 34f0f2dfee6399e7c56cf954e3a8108d 101 Gene3D G3DSA:4.10.830.10 41 101 2.0E-20 T 13-10-2018 BEN78_11150 34f0f2dfee6399e7c56cf954e3a8108d 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 1.3E-23 T 13-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_11150 34f0f2dfee6399e7c56cf954e3a8108d 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.95 T 13-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid BEN78_11150 34f0f2dfee6399e7c56cf954e3a8108d 101 SUPERFAMILY SSF57716 2 101 1.43E-35 T 13-10-2018 BEN78_11540 01e02cdb31566541d17422160b023a94 179 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 9 177 4.0E-55 T 13-10-2018 IPR006286 Deglycase PfpI BEN78_11540 01e02cdb31566541d17422160b023a94 179 Pfam PF01965 DJ-1/PfpI family 7 175 8.7E-54 T 13-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 BEN78_11540 01e02cdb31566541d17422160b023a94 179 SUPERFAMILY SSF52317 6 178 5.59E-51 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN78_11540 01e02cdb31566541d17422160b023a94 179 Gene3D G3DSA:3.40.50.880 1 179 4.3E-56 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN78_14280 ee9f1abbe66bf24e22853a150b29d783 305 Pfam PF00378 Enoyl-CoA hydratase/isomerase 80 218 1.4E-19 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 BEN78_14280 ee9f1abbe66bf24e22853a150b29d783 305 SUPERFAMILY SSF52096 77 247 5.36E-35 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BEN78_14280 ee9f1abbe66bf24e22853a150b29d783 305 Gene3D G3DSA:3.90.226.10 12 237 2.0E-72 T 13-10-2018 BEN78_03720 fe57108842eccad1538b65feafe30b44 586 Gene3D G3DSA:2.60.40.10 6 101 6.1E-21 T 13-10-2018 IPR013783 Immunoglobulin-like fold BEN78_03720 fe57108842eccad1538b65feafe30b44 586 TIGRFAM TIGR02402 trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase 21 551 8.0E-200 T 13-10-2018 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00500+3.2.1.141|MetaCyc: PWY-2661 BEN78_03720 fe57108842eccad1538b65feafe30b44 586 PIRSF PIRSF006337 7 574 6.6E-210 T 13-10-2018 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00500+3.2.1.141|MetaCyc: PWY-2661 BEN78_03720 fe57108842eccad1538b65feafe30b44 586 Pfam PF00128 Alpha amylase, catalytic domain 124 205 1.2E-10 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BEN78_03720 fe57108842eccad1538b65feafe30b44 586 Pfam PF00128 Alpha amylase, catalytic domain 228 346 2.3E-4 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BEN78_03720 fe57108842eccad1538b65feafe30b44 586 SUPERFAMILY SSF51445 92 506 1.81E-103 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily BEN78_03720 fe57108842eccad1538b65feafe30b44 586 SMART SM00642 113 465 5.9E-9 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BEN78_03720 fe57108842eccad1538b65feafe30b44 586 Gene3D G3DSA:1.10.10.760 433 477 3.6E-156 T 13-10-2018 BEN78_03720 fe57108842eccad1538b65feafe30b44 586 Gene3D G3DSA:3.20.20.80 105 505 3.6E-156 T 13-10-2018 BEN78_03720 fe57108842eccad1538b65feafe30b44 586 SUPERFAMILY SSF81296 5 95 1.57E-17 T 13-10-2018 IPR014756 Immunoglobulin E-set BEN78_12360 dda5c0499afbca18947843aa989baa12 90 SUPERFAMILY SSF46992 3 86 1.11E-30 T 13-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_12360 dda5c0499afbca18947843aa989baa12 90 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.723 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_12360 dda5c0499afbca18947843aa989baa12 90 Pfam PF01649 Ribosomal protein S20 2 84 2.4E-27 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_12360 dda5c0499afbca18947843aa989baa12 90 TIGRFAM TIGR00029 S20: ribosomal protein bS20 2 86 1.4E-27 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_12360 dda5c0499afbca18947843aa989baa12 90 Gene3D G3DSA:1.20.58.110 1 87 1.4E-28 T 13-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_12360 dda5c0499afbca18947843aa989baa12 90 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 89 1.0E-29 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_08990 bc444c4c4aa26ae7c18b0d3309b51d7a 409 Gene3D G3DSA:2.40.420.20 333 394 6.3E-11 T 13-10-2018 BEN78_08990 bc444c4c4aa26ae7c18b0d3309b51d7a 409 SUPERFAMILY SSF111369 74 322 6.15E-22 T 13-10-2018 BEN78_08990 bc444c4c4aa26ae7c18b0d3309b51d7a 409 Gene3D G3DSA:2.40.50.100 83 247 1.3E-51 T 13-10-2018 BEN78_08990 bc444c4c4aa26ae7c18b0d3309b51d7a 409 Gene3D G3DSA:2.40.30.170 248 322 1.3E-51 T 13-10-2018 BEN78_08990 bc444c4c4aa26ae7c18b0d3309b51d7a 409 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 74 407 1.3E-51 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BEN78_08990 bc444c4c4aa26ae7c18b0d3309b51d7a 409 Gene3D G3DSA:1.10.287.470 129 195 1.3E-51 T 13-10-2018 BEN78_08990 bc444c4c4aa26ae7c18b0d3309b51d7a 409 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 81 320 8.2E-22 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BEN78_15005 f9b7315ac31c1916ff421eef905894bc 330 Gene3D G3DSA:3.40.630.10 42 320 2.2E-60 T 13-10-2018 BEN78_15005 f9b7315ac31c1916ff421eef905894bc 330 SUPERFAMILY SSF53187 36 309 1.42E-52 T 13-10-2018 BEN78_15005 f9b7315ac31c1916ff421eef905894bc 330 Pfam PF04389 Peptidase family M28 116 304 9.5E-42 T 13-10-2018 IPR007484 Peptidase M28 BEN78_05490 89510825946e3ea5ba27847ef85be64c 221 Pfam PF02108 Flagellar assembly protein FliH 81 206 5.7E-10 T 13-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE BEN78_13420 bb22a1c419400dec2f114c79a732e83c 343 Gene3D G3DSA:3.10.520.20 17 331 5.9E-65 T 13-10-2018 BEN78_13420 bb22a1c419400dec2f114c79a732e83c 343 SUPERFAMILY SSF143631 23 323 1.96E-60 T 13-10-2018 IPR003374 ApbE-like superfamily BEN78_13420 bb22a1c419400dec2f114c79a732e83c 343 PIRSF PIRSF006268 1 327 5.5E-54 T 13-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 BEN78_13420 bb22a1c419400dec2f114c79a732e83c 343 Pfam PF02424 ApbE family 47 297 1.1E-56 T 13-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 BEN78_03330 03fccbb1224cb51f3eff82e19e1512ca 259 Pfam PF01061 ABC-2 type transporter 17 219 1.7E-14 T 13-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 BEN78_13320 9bf5b528cb05558058d772f3c2a3f203 277 Pfam PF04079 Segregation and condensation complex subunit ScpB 8 169 1.4E-50 T 13-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 BEN78_13320 9bf5b528cb05558058d772f3c2a3f203 277 SUPERFAMILY SSF46785 6 82 1.74E-14 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_13320 9bf5b528cb05558058d772f3c2a3f203 277 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 8 171 5.9E-35 T 13-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 BEN78_13320 9bf5b528cb05558058d772f3c2a3f203 277 SUPERFAMILY SSF46785 85 160 1.05E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_13320 9bf5b528cb05558058d772f3c2a3f203 277 Gene3D G3DSA:1.10.10.10 83 179 6.1E-33 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_13320 9bf5b528cb05558058d772f3c2a3f203 277 Gene3D G3DSA:1.10.10.10 2 82 7.7E-11 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_03905 e5b56aef4d390932497b7326a662cda2 632 Pfam PF13632 Glycosyl transferase family group 2 230 442 5.0E-17 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BEN78_03905 e5b56aef4d390932497b7326a662cda2 632 Gene3D G3DSA:3.90.550.10 130 357 4.9E-19 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_03905 e5b56aef4d390932497b7326a662cda2 632 SUPERFAMILY SSF53448 132 428 3.0E-26 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_11325 40b64f5d531b17744554764514510db9 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.2E-18 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_11325 40b64f5d531b17744554764514510db9 316 Gene3D G3DSA:3.40.190.10 93 293 2.8E-74 T 13-10-2018 BEN78_11325 40b64f5d531b17744554764514510db9 316 SUPERFAMILY SSF53850 90 299 1.99E-51 T 13-10-2018 BEN78_11325 40b64f5d531b17744554764514510db9 316 Gene3D G3DSA:1.10.10.10 2 88 3.4E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_11325 40b64f5d531b17744554764514510db9 316 SUPERFAMILY SSF46785 3 113 3.41E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_11325 40b64f5d531b17744554764514510db9 316 Gene3D G3DSA:3.40.190.10 164 266 2.8E-74 T 13-10-2018 BEN78_11325 40b64f5d531b17744554764514510db9 316 Pfam PF03466 LysR substrate binding domain 89 295 6.2E-53 T 13-10-2018 IPR005119 LysR, substrate-binding BEN78_16325 c94f46725ef4cf789117cdf6203b422e 130 SUPERFAMILY SSF47598 93 125 5.0E-5 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 BEN78_16325 c94f46725ef4cf789117cdf6203b422e 130 Gene3D G3DSA:3.30.160.250 1 85 7.2E-25 T 13-10-2018 BEN78_16325 c94f46725ef4cf789117cdf6203b422e 130 SUPERFAMILY SSF143100 1 65 1.44E-20 T 13-10-2018 IPR035069 TTHA1013/TTHA0281-like BEN78_16325 c94f46725ef4cf789117cdf6203b422e 130 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 3 126 6.2E-50 T 13-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system BEN78_03785 942bcafe54c58605103dbb67991c48c6 167 Pfam PF03061 Thioesterase superfamily 23 94 3.9E-19 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 BEN78_03785 942bcafe54c58605103dbb67991c48c6 167 Gene3D G3DSA:3.10.129.10 3 153 7.5E-59 T 13-10-2018 BEN78_03785 942bcafe54c58605103dbb67991c48c6 167 SUPERFAMILY SSF54637 6 153 6.34E-48 T 13-10-2018 IPR029069 HotDog domain superfamily BEN78_01435 679e6ef47c5c7aa0e8795815c53ade16 968 Gene3D G3DSA:2.170.130.10 44 187 9.9E-18 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_01435 679e6ef47c5c7aa0e8795815c53ade16 968 Pfam PF07715 TonB-dependent Receptor Plug Domain 71 183 1.4E-15 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_01435 679e6ef47c5c7aa0e8795815c53ade16 968 SUPERFAMILY SSF56935 41 968 5.86E-77 T 13-10-2018 BEN78_01435 679e6ef47c5c7aa0e8795815c53ade16 968 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 52 968 1.2E-207 T 13-10-2018 IPR010104 Bacterial TonB-dependent receptor BEN78_01435 679e6ef47c5c7aa0e8795815c53ade16 968 Gene3D G3DSA:2.40.170.20 338 968 1.5E-42 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_01435 679e6ef47c5c7aa0e8795815c53ade16 968 Pfam PF00593 TonB dependent receptor 468 965 6.1E-33 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_05685 31c581b9890271ed4571e0e69862b421 731 SUPERFAMILY SSF109604 344 495 4.5E-11 T 13-10-2018 BEN78_05685 31c581b9890271ed4571e0e69862b421 731 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 4 729 9.0E-193 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BEN78_05685 31c581b9890271ed4571e0e69862b421 731 Pfam PF05746 DALR anticodon binding domain 623 718 4.2E-7 T 13-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 BEN78_05685 31c581b9890271ed4571e0e69862b421 731 SMART SM00836 626 726 4.8E-4 T 13-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 BEN78_05685 31c581b9890271ed4571e0e69862b421 731 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 53 65 5.2E-29 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BEN78_05685 31c581b9890271ed4571e0e69862b421 731 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 319 335 5.2E-29 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BEN78_05685 31c581b9890271ed4571e0e69862b421 731 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 248 263 5.2E-29 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BEN78_05685 31c581b9890271ed4571e0e69862b421 731 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 8 21 5.2E-29 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BEN78_05685 31c581b9890271ed4571e0e69862b421 731 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 395 414 5.2E-29 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BEN78_05685 31c581b9890271ed4571e0e69862b421 731 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 4 729 23.46 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BEN78_05685 31c581b9890271ed4571e0e69862b421 731 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 7 591 4.9E-184 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BEN78_15100 a64bff2534150b649504ff25376b733a 413 Pfam PF03594 Benzoate membrane transport protein 18 389 1.5E-135 T 13-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 BEN78_15100 a64bff2534150b649504ff25376b733a 413 TIGRFAM TIGR00843 benE: benzoate transporter 16 390 5.1E-121 T 13-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 BEN78_06355 dc07efd9757b76dfebf915a4387e6492 255 Gene3D G3DSA:3.30.565.10 96 247 9.7E-33 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_06355 dc07efd9757b76dfebf915a4387e6492 255 SUPERFAMILY SSF55874 111 249 1.57E-33 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_06355 dc07efd9757b76dfebf915a4387e6492 255 PRINTS PR00344 Bacterial sensor protein C-terminal signature 193 203 2.6E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_06355 dc07efd9757b76dfebf915a4387e6492 255 PRINTS PR00344 Bacterial sensor protein C-terminal signature 232 245 2.6E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_06355 dc07efd9757b76dfebf915a4387e6492 255 PRINTS PR00344 Bacterial sensor protein C-terminal signature 208 226 2.6E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_06355 dc07efd9757b76dfebf915a4387e6492 255 PRINTS PR00344 Bacterial sensor protein C-terminal signature 175 189 2.6E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_06355 dc07efd9757b76dfebf915a4387e6492 255 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 136 246 4.4E-20 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_06355 dc07efd9757b76dfebf915a4387e6492 255 SMART SM00387 136 248 1.3E-28 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_06355 dc07efd9757b76dfebf915a4387e6492 255 SUPERFAMILY SSF47384 16 91 4.32E-9 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN78_06355 dc07efd9757b76dfebf915a4387e6492 255 Gene3D G3DSA:1.10.287.130 18 93 1.1E-7 T 13-10-2018 BEN78_02560 fa9915eb85f7e8a65a937b52a39abeee 334 Gene3D G3DSA:3.40.50.720 4 327 3.3E-149 T 13-10-2018 BEN78_02560 fa9915eb85f7e8a65a937b52a39abeee 334 PIRSF PIRSF000149 1 334 1.6E-129 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_02560 fa9915eb85f7e8a65a937b52a39abeee 334 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 2.1E-132 T 13-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_02560 fa9915eb85f7e8a65a937b52a39abeee 334 Gene3D G3DSA:3.30.360.10 151 316 3.3E-149 T 13-10-2018 BEN78_02560 fa9915eb85f7e8a65a937b52a39abeee 334 SUPERFAMILY SSF51735 3 168 7.53E-68 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_02560 fa9915eb85f7e8a65a937b52a39abeee 334 SMART SM00846 3 152 5.1E-98 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_02560 fa9915eb85f7e8a65a937b52a39abeee 334 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 13-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_02560 fa9915eb85f7e8a65a937b52a39abeee 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 111 124 1.2E-46 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_02560 fa9915eb85f7e8a65a937b52a39abeee 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 1.2E-46 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_02560 fa9915eb85f7e8a65a937b52a39abeee 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 1.2E-46 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_02560 fa9915eb85f7e8a65a937b52a39abeee 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 1.2E-46 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_02560 fa9915eb85f7e8a65a937b52a39abeee 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 1.2E-46 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_02560 fa9915eb85f7e8a65a937b52a39abeee 334 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 314 1.8E-65 T 13-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_02560 fa9915eb85f7e8a65a937b52a39abeee 334 SUPERFAMILY SSF55347 151 314 3.87E-74 T 13-10-2018 BEN78_02560 fa9915eb85f7e8a65a937b52a39abeee 334 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 104 5.8E-39 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN78_13360 c09d3d612760e4b020b6af49b89717ed 1039 SUPERFAMILY SSF48208 552 979 1.29E-39 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BEN78_13360 c09d3d612760e4b020b6af49b89717ed 1039 Gene3D G3DSA:2.60.120.430 13 170 1.1E-9 T 13-10-2018 BEN78_13360 c09d3d612760e4b020b6af49b89717ed 1039 Gene3D G3DSA:2.60.120.260 175 298 9.9E-21 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily BEN78_13360 c09d3d612760e4b020b6af49b89717ed 1039 SUPERFAMILY SSF49785 18 171 6.52E-21 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily BEN78_13360 c09d3d612760e4b020b6af49b89717ed 1039 SUPERFAMILY SSF49785 181 293 1.13E-16 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily BEN78_13360 c09d3d612760e4b020b6af49b89717ed 1039 Pfam PF00754 F5/8 type C domain 184 292 7.8E-15 T 13-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain BEN78_13360 c09d3d612760e4b020b6af49b89717ed 1039 Gene3D G3DSA:1.50.10.10 614 921 5.7E-20 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 BEN78_04705 0862c137bce60fb5b11a94bd167ec09c 431 Gene3D G3DSA:1.20.1250.20 12 230 2.3E-44 T 13-10-2018 BEN78_04705 0862c137bce60fb5b11a94bd167ec09c 431 SUPERFAMILY SSF103473 7 419 7.19E-31 T 13-10-2018 IPR036259 MFS transporter superfamily BEN78_04705 0862c137bce60fb5b11a94bd167ec09c 431 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 97 415 4.9E-118 T 13-10-2018 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0015757|GO:0016021|GO:1904659 BEN78_04705 0862c137bce60fb5b11a94bd167ec09c 431 Gene3D G3DSA:1.20.1250.20 236 423 3.8E-41 T 13-10-2018 BEN78_04705 0862c137bce60fb5b11a94bd167ec09c 431 Pfam PF07690 Major Facilitator Superfamily 22 380 2.5E-13 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN78_11305 1a4253f58f8bf77fb4e558015521ea33 682 Gene3D G3DSA:3.20.20.70 13 380 5.2E-114 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_11305 1a4253f58f8bf77fb4e558015521ea33 682 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 628 644 1.1E-12 T 13-10-2018 BEN78_11305 1a4253f58f8bf77fb4e558015521ea33 682 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 388 407 1.1E-12 T 13-10-2018 BEN78_11305 1a4253f58f8bf77fb4e558015521ea33 682 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 508 526 1.1E-12 T 13-10-2018 BEN78_11305 1a4253f58f8bf77fb4e558015521ea33 682 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 387 409 1.2E-5 T 13-10-2018 BEN78_11305 1a4253f58f8bf77fb4e558015521ea33 682 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 629 643 1.2E-5 T 13-10-2018 BEN78_11305 1a4253f58f8bf77fb4e558015521ea33 682 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 387 648 4.0E-21 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BEN78_11305 1a4253f58f8bf77fb4e558015521ea33 682 SUPERFAMILY SSF51971 344 527 1.47E-40 T 13-10-2018 BEN78_11305 1a4253f58f8bf77fb4e558015521ea33 682 Gene3D G3DSA:3.50.50.60 480 635 1.0E-111 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_11305 1a4253f58f8bf77fb4e558015521ea33 682 SUPERFAMILY SSF51395 11 370 2.25E-104 T 13-10-2018 BEN78_11305 1a4253f58f8bf77fb4e558015521ea33 682 Gene3D G3DSA:3.40.50.720 387 675 1.0E-111 T 13-10-2018 BEN78_11305 1a4253f58f8bf77fb4e558015521ea33 682 SUPERFAMILY SSF51905 471 660 1.94E-21 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_11305 1a4253f58f8bf77fb4e558015521ea33 682 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 17 340 1.2E-72 T 13-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 BEN78_07425 46658aa46a395b642836e6da04f59c4d 915 Pfam PF00593 TonB dependent receptor 358 914 2.8E-35 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_07425 46658aa46a395b642836e6da04f59c4d 915 Pfam PF07715 TonB-dependent Receptor Plug Domain 67 172 1.2E-17 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_07425 46658aa46a395b642836e6da04f59c4d 915 SUPERFAMILY SSF56935 46 915 3.41E-83 T 13-10-2018 BEN78_07425 46658aa46a395b642836e6da04f59c4d 915 Gene3D G3DSA:2.170.130.10 48 176 3.8E-27 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_10390 e6a9764c5bd7169f89f0c877f9688f03 195 Gene3D G3DSA:3.40.109.10 7 172 1.3E-31 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BEN78_10390 e6a9764c5bd7169f89f0c877f9688f03 195 Pfam PF00881 Nitroreductase family 14 171 8.6E-16 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 BEN78_10390 e6a9764c5bd7169f89f0c877f9688f03 195 PIRSF PIRSF000232 3 195 1.2E-53 T 13-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like BEN78_10390 e6a9764c5bd7169f89f0c877f9688f03 195 SUPERFAMILY SSF55469 7 186 1.44E-28 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BEN78_05860 9828aab1d5d50b1597d4a19338531f6d 270 Gene3D G3DSA:3.40.190.10 116 220 5.1E-92 T 13-10-2018 BEN78_05860 9828aab1d5d50b1597d4a19338531f6d 270 Gene3D G3DSA:3.40.190.10 37 268 5.1E-92 T 13-10-2018 BEN78_05860 9828aab1d5d50b1597d4a19338531f6d 270 Pfam PF03180 NLPA lipoprotein 35 270 4.3E-91 T 13-10-2018 IPR004872 Lipoprotein NlpA family BEN78_05860 9828aab1d5d50b1597d4a19338531f6d 270 PIRSF PIRSF002854 3 270 3.0E-95 T 13-10-2018 IPR004872 Lipoprotein NlpA family BEN78_05860 9828aab1d5d50b1597d4a19338531f6d 270 SUPERFAMILY SSF53850 35 270 1.63E-75 T 13-10-2018 BEN78_05145 eb09075bb56d918d2a97eb2f64cbec75 283 SUPERFAMILY SSF53335 69 271 1.47E-26 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_05145 eb09075bb56d918d2a97eb2f64cbec75 283 Gene3D G3DSA:3.40.50.150 104 272 1.1E-16 T 13-10-2018 BEN78_11040 80efae02daf4633eee02e8500f4a0b15 181 Pfam PF00466 Ribosomal protein L10 6 101 3.5E-23 T 13-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 BEN78_11040 80efae02daf4633eee02e8500f4a0b15 181 SUPERFAMILY SSF160369 4 160 1.57E-44 T 13-10-2018 BEN78_11040 80efae02daf4633eee02e8500f4a0b15 181 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 25.099 T 13-10-2018 IPR022973 Ribosomal protein L10 BEN78_11040 80efae02daf4633eee02e8500f4a0b15 181 Gene3D G3DSA:3.30.70.1730 1 124 1.0E-30 T 13-10-2018 BEN78_05730 b4cf8ea2230cc0055d12f977606e5b82 959 Pfam PF00593 TonB dependent receptor 401 957 2.0E-50 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_05730 b4cf8ea2230cc0055d12f977606e5b82 959 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 48 - T 13-10-2018 IPR010916 TonB box, conserved site BEN78_05730 b4cf8ea2230cc0055d12f977606e5b82 959 SUPERFAMILY SSF56935 29 959 5.8E-101 T 13-10-2018 BEN78_05730 b4cf8ea2230cc0055d12f977606e5b82 959 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 181 8.1E-25 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_05730 b4cf8ea2230cc0055d12f977606e5b82 959 Gene3D G3DSA:2.170.130.10 37 184 4.6E-38 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_05655 4dacdd8d678383b334b2b1ae6f2aeb38 252 Pfam PF00902 Sec-independent protein translocase protein (TatC) 16 226 1.0E-64 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BEN78_05655 4dacdd8d678383b334b2b1ae6f2aeb38 252 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 159 187 3.5E-42 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BEN78_05655 4dacdd8d678383b334b2b1ae6f2aeb38 252 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 108 134 3.5E-42 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BEN78_05655 4dacdd8d678383b334b2b1ae6f2aeb38 252 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 13 40 3.5E-42 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BEN78_05655 4dacdd8d678383b334b2b1ae6f2aeb38 252 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 90 108 3.5E-42 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BEN78_05655 4dacdd8d678383b334b2b1ae6f2aeb38 252 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 11 251 16.241 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BEN78_05655 4dacdd8d678383b334b2b1ae6f2aeb38 252 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 14 231 1.5E-64 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BEN78_05655 4dacdd8d678383b334b2b1ae6f2aeb38 252 ProSitePatterns PS01218 TatC family signature. 159 178 - T 13-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site BEN78_12165 1c5426049f91207b698b1b04d07975f8 208 SUPERFAMILY SSF51197 10 186 5.91E-40 T 13-10-2018 BEN78_12165 1c5426049f91207b698b1b04d07975f8 208 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 86 177 5.9E-16 T 13-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like BEN78_12165 1c5426049f91207b698b1b04d07975f8 208 Gene3D G3DSA:2.60.120.590 11 194 1.1E-37 T 13-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily BEN78_07065 295f71eda9ba91f2e96a824054588d1b 689 Gene3D G3DSA:2.120.10.30 31 139 8.6E-28 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BEN78_07065 295f71eda9ba91f2e96a824054588d1b 689 Gene3D G3DSA:2.120.10.30 140 250 2.9E-39 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BEN78_07065 295f71eda9ba91f2e96a824054588d1b 689 SUPERFAMILY SSF101898 59 340 5.75E-41 T 13-10-2018 BEN78_07065 295f71eda9ba91f2e96a824054588d1b 689 Pfam PF01436 NHL repeat 221 246 1.2E-6 T 13-10-2018 IPR001258 NHL repeat GO:0005515 BEN78_07065 295f71eda9ba91f2e96a824054588d1b 689 Pfam PF01436 NHL repeat 114 139 4.0E-5 T 13-10-2018 IPR001258 NHL repeat GO:0005515 BEN78_07065 295f71eda9ba91f2e96a824054588d1b 689 Gene3D G3DSA:2.40.10.500 265 350 9.0E-10 T 13-10-2018 BEN78_03240 fcf41d079524b88f2bfb51fdcd7c8917 418 Pfam PF12821 Threonine/Serine exporter, ThrE 288 409 1.5E-13 T 13-10-2018 IPR024528 Threonine/Serine exporter, ThrE BEN78_03240 fcf41d079524b88f2bfb51fdcd7c8917 418 Pfam PF06738 Putative threonine/serine exporter 19 262 8.8E-55 T 13-10-2018 IPR010619 Putative threonine/serine exporter BEN78_03380 44781102a31dbdfd26e618c91479dc1b 334 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 82 323 1.1E-35 T 13-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 BEN78_03380 44781102a31dbdfd26e618c91479dc1b 334 Gene3D G3DSA:3.90.850.10 1 329 1.1E-130 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 BEN78_03380 44781102a31dbdfd26e618c91479dc1b 334 SUPERFAMILY SSF56529 77 323 2.62E-54 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 BEN78_04410 beafa07ee7633e68c64126f641457400 434 Pfam PF02321 Outer membrane efflux protein 248 421 2.2E-14 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BEN78_04410 beafa07ee7633e68c64126f641457400 434 Pfam PF02321 Outer membrane efflux protein 101 222 5.1E-12 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BEN78_04410 beafa07ee7633e68c64126f641457400 434 Gene3D G3DSA:1.20.1600.10 19 429 7.1E-42 T 13-10-2018 BEN78_04410 beafa07ee7633e68c64126f641457400 434 SUPERFAMILY SSF56954 3 423 4.32E-50 T 13-10-2018 BEN78_14075 637fbe224ca4fc1e09cd29461a58b4c5 90 Pfam PF09650 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) 4 89 7.7E-31 T 13-10-2018 IPR013433 Putative polyhydroxyalkanoic acid system protein BEN78_14075 637fbe224ca4fc1e09cd29461a58b4c5 90 TIGRFAM TIGR02610 PHA_gran_rgn: putative polyhydroxyalkanoic acid system protein 1 89 1.3E-33 T 13-10-2018 IPR013433 Putative polyhydroxyalkanoic acid system protein BEN78_04905 3e23b09f6636f508c01fc189a69090e3 269 SUPERFAMILY SSF88713 65 255 1.11E-46 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 BEN78_04905 3e23b09f6636f508c01fc189a69090e3 269 Pfam PF01522 Polysaccharide deacetylase 73 193 1.2E-28 T 13-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 BEN78_04905 3e23b09f6636f508c01fc189a69090e3 269 Gene3D G3DSA:3.20.20.370 66 261 6.8E-47 T 13-10-2018 BEN78_16525 9d87702a85e59d7bb5aaba6a549c90c5 255 Hamap MF_00361 NAD kinase [nadK]. 5 255 20.093 T 13-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 BEN78_16525 9d87702a85e59d7bb5aaba6a549c90c5 255 Pfam PF01513 ATP-NAD kinase 32 219 1.7E-13 T 13-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 BEN78_16525 9d87702a85e59d7bb5aaba6a549c90c5 255 Gene3D G3DSA:3.40.50.10330 14 237 1.1E-36 T 13-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 BEN78_16525 9d87702a85e59d7bb5aaba6a549c90c5 255 SUPERFAMILY SSF111331 23 238 1.14E-51 T 13-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily BEN78_16525 9d87702a85e59d7bb5aaba6a549c90c5 255 Gene3D G3DSA:2.60.200.30 98 231 1.1E-36 T 13-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 BEN78_02240 8bed0d7d30c4e994eada05efd336ba9a 227 Gene3D G3DSA:2.60.120.10 16 126 3.8E-34 T 13-10-2018 IPR014710 RmlC-like jelly roll fold BEN78_02240 8bed0d7d30c4e994eada05efd336ba9a 227 SUPERFAMILY SSF51182 7 200 4.09E-42 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily BEN78_02240 8bed0d7d30c4e994eada05efd336ba9a 227 Pfam PF05962 HutD 13 198 9.4E-43 T 13-10-2018 IPR010282 Uncharacterised protein family HutD/Ves BEN78_02240 8bed0d7d30c4e994eada05efd336ba9a 227 Gene3D G3DSA:2.60.120.10 15 196 3.8E-34 T 13-10-2018 IPR014710 RmlC-like jelly roll fold BEN78_05855 daad05989a46796c28a6133658d8b250 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 41 225 3.0E-20 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN78_05855 daad05989a46796c28a6133658d8b250 225 SUPERFAMILY SSF161098 16 215 1.31E-39 T 13-10-2018 IPR035906 MetI-like superfamily BEN78_05855 daad05989a46796c28a6133658d8b250 225 Gene3D G3DSA:1.10.3720.10 13 224 2.7E-41 T 13-10-2018 IPR035906 MetI-like superfamily BEN78_01285 401cba7c8010f96a96aad04b4289558c 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 47 67 7.6E-5 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN78_01285 401cba7c8010f96a96aad04b4289558c 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 24 7.6E-5 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN78_01285 401cba7c8010f96a96aad04b4289558c 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 24 37 7.6E-5 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN78_01285 401cba7c8010f96a96aad04b4289558c 135 SUPERFAMILY SSF46955 12 122 6.23E-24 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily BEN78_01285 401cba7c8010f96a96aad04b4289558c 135 Pfam PF13411 MerR HTH family regulatory protein 13 75 4.7E-12 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN78_01285 401cba7c8010f96a96aad04b4289558c 135 SMART SM00422 12 80 1.3E-12 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN78_01285 401cba7c8010f96a96aad04b4289558c 135 Gene3D G3DSA:1.10.1660.10 5 131 1.6E-27 T 13-10-2018 BEN78_03245 85fd89a24cfe425c368809a83eee0ad6 369 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 128 365 1.2E-66 T 13-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria BEN78_03245 85fd89a24cfe425c368809a83eee0ad6 369 Pfam PF02405 Permease MlaE 153 361 1.6E-67 T 13-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 BEN78_16195 f694ef7189d97466499d0fad380eb28a 367 Gene3D G3DSA:3.20.20.140 27 365 4.4E-30 T 13-10-2018 BEN78_16195 f694ef7189d97466499d0fad380eb28a 367 Pfam PF04909 Amidohydrolase 115 362 2.7E-15 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BEN78_16195 f694ef7189d97466499d0fad380eb28a 367 SUPERFAMILY SSF51556 44 362 2.23E-19 T 13-10-2018 IPR032466 Metal-dependent hydrolase BEN78_04305 19e7943148cd327b2b643bac54163453 94 Pfam PF13223 Protein of unknown function (DUF4031) 3 80 3.6E-31 T 13-10-2018 IPR025109 Domain of unknown function DUF4031 BEN78_13830 46dcbfcd7ee37f11ad11f017930cf56e 509 Pfam PF13180 PDZ domain 297 387 1.0E-19 T 13-10-2018 IPR001478 PDZ domain GO:0005515 BEN78_13830 46dcbfcd7ee37f11ad11f017930cf56e 509 Pfam PF13180 PDZ domain 436 500 2.6E-8 T 13-10-2018 IPR001478 PDZ domain GO:0005515 BEN78_13830 46dcbfcd7ee37f11ad11f017930cf56e 509 Gene3D G3DSA:2.30.42.10 292 395 6.6E-26 T 13-10-2018 BEN78_13830 46dcbfcd7ee37f11ad11f017930cf56e 509 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 56 500 8.9E-140 T 13-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 BEN78_13830 46dcbfcd7ee37f11ad11f017930cf56e 509 Gene3D G3DSA:2.30.42.10 414 508 3.6E-17 T 13-10-2018 BEN78_13830 46dcbfcd7ee37f11ad11f017930cf56e 509 Gene3D G3DSA:2.40.10.120 54 289 6.0E-78 T 13-10-2018 BEN78_13830 46dcbfcd7ee37f11ad11f017930cf56e 509 SUPERFAMILY SSF50156 277 387 5.92E-23 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 BEN78_13830 46dcbfcd7ee37f11ad11f017930cf56e 509 SUPERFAMILY SSF50156 413 497 1.03E-13 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 BEN78_13830 46dcbfcd7ee37f11ad11f017930cf56e 509 Pfam PF13365 Trypsin-like peptidase domain 122 257 4.0E-36 T 13-10-2018 BEN78_13830 46dcbfcd7ee37f11ad11f017930cf56e 509 SUPERFAMILY SSF50494 53 288 8.08E-64 T 13-10-2018 IPR009003 Peptidase S1, PA clan BEN78_13830 46dcbfcd7ee37f11ad11f017930cf56e 509 PRINTS PR00834 HtrA/DegQ protease family signature 228 245 1.2E-48 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BEN78_13830 46dcbfcd7ee37f11ad11f017930cf56e 509 PRINTS PR00834 HtrA/DegQ protease family signature 250 267 1.2E-48 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BEN78_13830 46dcbfcd7ee37f11ad11f017930cf56e 509 PRINTS PR00834 HtrA/DegQ protease family signature 131 143 1.2E-48 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BEN78_13830 46dcbfcd7ee37f11ad11f017930cf56e 509 PRINTS PR00834 HtrA/DegQ protease family signature 152 172 1.2E-48 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BEN78_13830 46dcbfcd7ee37f11ad11f017930cf56e 509 PRINTS PR00834 HtrA/DegQ protease family signature 192 216 1.2E-48 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BEN78_13830 46dcbfcd7ee37f11ad11f017930cf56e 509 PRINTS PR00834 HtrA/DegQ protease family signature 336 348 1.2E-48 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BEN78_13830 46dcbfcd7ee37f11ad11f017930cf56e 509 SMART SM00228 414 495 5.5E-7 T 13-10-2018 IPR001478 PDZ domain GO:0005515 BEN78_13830 46dcbfcd7ee37f11ad11f017930cf56e 509 SMART SM00228 296 378 7.0E-14 T 13-10-2018 IPR001478 PDZ domain GO:0005515 BEN78_10745 9c6b687cb802eb8004da6938eaf091ac 376 SUPERFAMILY SSF52540 8 341 1.58E-69 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_10745 9c6b687cb802eb8004da6938eaf091ac 376 Pfam PF00437 Type II/IV secretion system protein 116 271 3.7E-33 T 13-10-2018 IPR001482 Type II/IV secretion system protein BEN78_10745 9c6b687cb802eb8004da6938eaf091ac 376 Gene3D G3DSA:3.40.50.300 104 357 2.4E-85 T 13-10-2018 BEN78_10745 9c6b687cb802eb8004da6938eaf091ac 376 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 7 347 2.0E-135 T 13-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 BEN78_10745 9c6b687cb802eb8004da6938eaf091ac 376 Gene3D G3DSA:3.30.450.90 2 102 1.2E-31 T 13-10-2018 BEN78_04670 bbe6703fa3cb9e6db540347c9dc068b3 278 Gene3D G3DSA:3.20.20.410 9 277 3.4E-49 T 13-10-2018 IPR036520 UPF0759 superfamily BEN78_04670 bbe6703fa3cb9e6db540347c9dc068b3 278 SUPERFAMILY SSF117396 15 274 1.22E-67 T 13-10-2018 IPR036520 UPF0759 superfamily BEN78_04670 bbe6703fa3cb9e6db540347c9dc068b3 278 Pfam PF01904 Protein of unknown function DUF72 32 272 2.4E-57 T 13-10-2018 IPR002763 Protein of unknown function DUF72 BEN78_00170 66b2f81fc84a7e8f15824595bc208940 294 Pfam PF01256 Carbohydrate kinase 35 288 8.4E-50 T 13-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 BEN78_00170 66b2f81fc84a7e8f15824595bc208940 294 SUPERFAMILY SSF53613 18 293 1.18E-59 T 13-10-2018 IPR029056 Ribokinase-like BEN78_00170 66b2f81fc84a7e8f15824595bc208940 294 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 10 292 19.45 T 13-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 BEN78_00170 66b2f81fc84a7e8f15824595bc208940 294 Gene3D G3DSA:3.40.1190.20 11 294 1.2E-71 T 13-10-2018 IPR029056 Ribokinase-like BEN78_00170 66b2f81fc84a7e8f15824595bc208940 294 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 29 293 5.1E-57 T 13-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 BEN78_15500 98c7d7efc20421559bcb03abda04ad5d 204 SUPERFAMILY SSF52540 48 162 9.03E-32 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_15500 98c7d7efc20421559bcb03abda04ad5d 204 PIRSF PIRSF037290 4 203 1.8E-74 T 13-10-2018 IPR017166 Uncharacterised conserved protein UCP037290 BEN78_15500 98c7d7efc20421559bcb03abda04ad5d 204 Gene3D G3DSA:3.40.50.300 49 161 2.6E-36 T 13-10-2018 BEN78_00780 4bf702dd89203f0badbf276fe4672aeb 67 Pfam PF04024 PspC domain 8 64 4.8E-18 T 13-10-2018 IPR007168 Phage shock protein, PspC, N-terminal BEN78_00070 8135bdf4b58b05385a2476c2d5f03ab9 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 2.4E-7 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN78_00070 8135bdf4b58b05385a2476c2d5f03ab9 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 2.4E-7 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN78_00070 8135bdf4b58b05385a2476c2d5f03ab9 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 68 6.1E-14 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN78_00070 8135bdf4b58b05385a2476c2d5f03ab9 199 Gene3D G3DSA:1.10.357.10 7 199 1.1E-27 T 13-10-2018 BEN78_00070 8135bdf4b58b05385a2476c2d5f03ab9 199 SUPERFAMILY SSF46689 10 76 1.8E-15 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN78_07735 09d702cde1be4690db7ea163a19b9f91 141 PIRSF PIRSF004638 1 127 2.2E-22 T 13-10-2018 IPR005265 Uncharacterised protein family UPF0093 BEN78_07735 09d702cde1be4690db7ea163a19b9f91 141 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 124 1.4E-18 T 13-10-2018 IPR005265 Uncharacterised protein family UPF0093 BEN78_02030 39958e47a30653af34f1241c45af10b1 288 Gene3D G3DSA:3.30.465.10 196 284 3.5E-26 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 BEN78_02030 39958e47a30653af34f1241c45af10b1 288 Gene3D G3DSA:3.10.580.10 52 195 2.6E-52 T 13-10-2018 BEN78_02030 39958e47a30653af34f1241c45af10b1 288 SMART SM01091 208 286 2.0E-24 T 13-10-2018 IPR005170 Transporter-associated domain BEN78_02030 39958e47a30653af34f1241c45af10b1 288 SUPERFAMILY SSF54631 67 202 2.53E-31 T 13-10-2018 BEN78_02030 39958e47a30653af34f1241c45af10b1 288 Pfam PF03471 Transporter associated domain 210 284 3.5E-18 T 13-10-2018 IPR005170 Transporter-associated domain BEN78_02030 39958e47a30653af34f1241c45af10b1 288 Pfam PF00571 CBS domain 70 125 3.2E-7 T 13-10-2018 IPR000644 CBS domain BEN78_02030 39958e47a30653af34f1241c45af10b1 288 Pfam PF00571 CBS domain 141 190 5.9E-5 T 13-10-2018 IPR000644 CBS domain BEN78_02030 39958e47a30653af34f1241c45af10b1 288 SMART SM00116 79 128 0.4 T 13-10-2018 IPR000644 CBS domain BEN78_02030 39958e47a30653af34f1241c45af10b1 288 SMART SM00116 142 190 4.0 T 13-10-2018 IPR000644 CBS domain BEN78_02030 39958e47a30653af34f1241c45af10b1 288 SUPERFAMILY SSF56176 207 285 9.54E-21 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BEN78_11610 251be15901142d971a321cd79edc1a17 73 SUPERFAMILY SSF55174 5 70 5.89E-18 T 13-10-2018 BEN78_11610 251be15901142d971a321cd79edc1a17 73 Pfam PF13275 S4 domain 7 71 5.7E-24 T 13-10-2018 BEN78_11610 251be15901142d971a321cd79edc1a17 73 Gene3D G3DSA:3.10.290.10 1 72 7.8E-25 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BEN78_02310 fb3579b33e6961ef2ed3a8d1ba4ad0de 321 Pfam PF00248 Aldo/keto reductase family 16 310 3.3E-68 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain BEN78_02310 fb3579b33e6961ef2ed3a8d1ba4ad0de 321 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 209 215 2.8E-11 T 13-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 BEN78_02310 fb3579b33e6961ef2ed3a8d1ba4ad0de 321 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 274 287 2.8E-11 T 13-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 BEN78_02310 fb3579b33e6961ef2ed3a8d1ba4ad0de 321 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 261 273 2.8E-11 T 13-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 BEN78_02310 fb3579b33e6961ef2ed3a8d1ba4ad0de 321 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 113 123 2.8E-11 T 13-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 BEN78_02310 fb3579b33e6961ef2ed3a8d1ba4ad0de 321 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 164 183 2.8E-11 T 13-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 BEN78_02310 fb3579b33e6961ef2ed3a8d1ba4ad0de 321 Gene3D G3DSA:3.20.20.100 1 321 7.5E-109 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BEN78_02310 fb3579b33e6961ef2ed3a8d1ba4ad0de 321 SUPERFAMILY SSF51430 1 319 1.57E-90 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BEN78_11615 b983da77806e43fdacd2455c720e0f08 364 Pfam PF01590 GAF domain 28 156 2.1E-12 T 13-10-2018 IPR003018 GAF domain GO:0005515 BEN78_11615 b983da77806e43fdacd2455c720e0f08 364 SMART SM00267 189 355 6.2E-52 T 13-10-2018 IPR000160 GGDEF domain BEN78_11615 b983da77806e43fdacd2455c720e0f08 364 Gene3D G3DSA:3.30.70.270 185 355 6.1E-54 T 13-10-2018 BEN78_11615 b983da77806e43fdacd2455c720e0f08 364 Gene3D G3DSA:3.30.450.40 14 170 2.5E-21 T 13-10-2018 IPR029016 GAF-like domain superfamily BEN78_11615 b983da77806e43fdacd2455c720e0f08 364 SUPERFAMILY SSF55781 28 168 1.94E-27 T 13-10-2018 BEN78_11615 b983da77806e43fdacd2455c720e0f08 364 SUPERFAMILY SSF55073 205 355 4.47E-44 T 13-10-2018 IPR029787 Nucleotide cyclase BEN78_11615 b983da77806e43fdacd2455c720e0f08 364 Pfam PF00990 Diguanylate cyclase, GGDEF domain 201 351 1.0E-39 T 13-10-2018 IPR000160 GGDEF domain BEN78_11615 b983da77806e43fdacd2455c720e0f08 364 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 196 353 1.5E-42 T 13-10-2018 IPR000160 GGDEF domain BEN78_11615 b983da77806e43fdacd2455c720e0f08 364 SMART SM00065 26 169 2.2E-9 T 13-10-2018 IPR003018 GAF domain GO:0005515 BEN78_13525 ae70b777756d851c61175881c86f1f82 154 Pfam PF00011 Hsp20/alpha crystallin family 30 139 1.4E-20 T 13-10-2018 IPR002068 Alpha crystallin/Hsp20 domain BEN78_13525 ae70b777756d851c61175881c86f1f82 154 Gene3D G3DSA:2.60.40.790 1 139 8.7E-33 T 13-10-2018 IPR008978 HSP20-like chaperone BEN78_13525 ae70b777756d851c61175881c86f1f82 154 SUPERFAMILY SSF49764 16 139 3.35E-33 T 13-10-2018 IPR008978 HSP20-like chaperone BEN78_10485 e94e4edbda2c79bdfc49beb69525b816 162 Pfam PF00710 Asparaginase, N-terminal 4 152 5.6E-24 T 13-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 BEN78_10485 e94e4edbda2c79bdfc49beb69525b816 162 SUPERFAMILY SSF53774 1 152 1.96E-33 T 13-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 BEN78_10485 e94e4edbda2c79bdfc49beb69525b816 162 Gene3D G3DSA:3.40.50.1170 2 161 2.4E-31 T 13-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 BEN78_10485 e94e4edbda2c79bdfc49beb69525b816 162 PRINTS PR00139 Asparaginase/glutaminase family signature 4 15 4.6E-6 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 BEN78_10485 e94e4edbda2c79bdfc49beb69525b816 162 PRINTS PR00139 Asparaginase/glutaminase family signature 75 93 4.6E-6 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 BEN78_14090 cdd9584351c91e1e3b1e5dc29c149f17 201 Pfam PF01794 Ferric reductase like transmembrane component 46 160 3.3E-17 T 13-10-2018 IPR013130 Ferric reductase transmembrane component-like domain BEN78_14090 cdd9584351c91e1e3b1e5dc29c149f17 201 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 2 199 22.313 T 13-10-2018 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 BEN78_02180 2c7b114e51c21b5bb4217c119c51fd69 164 Pfam PF07273 Protein of unknown function (DUF1439) 17 151 2.8E-8 T 13-10-2018 IPR010835 Protein of unknown function DUF1439 BEN78_01330 f568ca951908842fea057936e5c661b3 544 Gene3D G3DSA:3.30.2290.10 36 228 1.6E-15 T 13-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal BEN78_01330 f568ca951908842fea057936e5c661b3 544 Pfam PF01523 Putative modulator of DNA gyrase 59 385 6.3E-58 T 13-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 BEN78_01330 f568ca951908842fea057936e5c661b3 544 SUPERFAMILY SSF111283 42 537 1.09E-92 T 13-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 BEN78_07875 f585305d3cec2b7329ccd3c7bceaba90 326 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 34 298 2.2E-11 T 13-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 BEN78_07875 f585305d3cec2b7329ccd3c7bceaba90 326 PIRSF PIRSF028561 1 320 2.8E-124 T 13-10-2018 IPR014548 Predicted acyltransferase BEN78_01500 4463ff82f586384e0d9110cb39ab685d 274 Gene3D G3DSA:1.10.10.10 4 110 2.5E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_01500 4463ff82f586384e0d9110cb39ab685d 274 SMART SM00862 32 108 3.1E-17 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN78_01500 4463ff82f586384e0d9110cb39ab685d 274 Pfam PF00486 Transcriptional regulatory protein, C terminal 33 108 2.3E-16 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN78_01500 4463ff82f586384e0d9110cb39ab685d 274 SUPERFAMILY SSF46894 12 109 2.52E-18 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BEN78_07075 281d00417a28328f92a18a3ea16b4fd9 255 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 39 239 9.6E-11 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase BEN78_07075 281d00417a28328f92a18a3ea16b4fd9 255 SUPERFAMILY SSF56219 4 250 8.24E-30 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BEN78_07075 281d00417a28328f92a18a3ea16b4fd9 255 Gene3D G3DSA:3.60.10.10 7 251 1.2E-32 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BEN78_16805 da9990634f68df33cc7257bd57701174 596 Pfam PF05960 Bacterial protein of unknown function (DUF885) 74 581 1.3E-140 T 13-10-2018 IPR010281 Protein of unknown function DUF885 BEN78_04225 a958f228cff886292c6799306f941dea 232 Gene3D G3DSA:3.10.290.10 1 54 4.9E-8 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BEN78_04225 a958f228cff886292c6799306f941dea 232 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 13-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 BEN78_04225 a958f228cff886292c6799306f941dea 232 Pfam PF00849 RNA pseudouridylate synthase 61 193 1.7E-13 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN78_04225 a958f228cff886292c6799306f941dea 232 Gene3D G3DSA:3.30.70.1560 128 210 1.1E-48 T 13-10-2018 BEN78_04225 a958f228cff886292c6799306f941dea 232 Gene3D G3DSA:3.30.70.580 61 226 1.1E-48 T 13-10-2018 BEN78_04225 a958f228cff886292c6799306f941dea 232 SUPERFAMILY SSF55120 60 225 3.68E-38 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN78_04225 a958f228cff886292c6799306f941dea 232 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 64 223 1.6E-41 T 13-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 BEN78_13700 05b51ff78f9b8366d94b393a6d3d2867 99 TIGRFAM TIGR02448 TIGR02448: conserverd hypothetical protein 3 98 8.1E-29 T 13-10-2018 IPR012661 Conserved hypothetical protein CHP02448 BEN78_13700 05b51ff78f9b8366d94b393a6d3d2867 99 Pfam PF09498 Protein of unknown function (DUF2388) 29 98 9.7E-28 T 13-10-2018 IPR012661 Conserved hypothetical protein CHP02448 BEN78_08910 707ce6ac1c6123a7189893c9b8365e3d 369 Pfam PF01098 Cell cycle protein 25 363 1.7E-92 T 13-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN78_08910 707ce6ac1c6123a7189893c9b8365e3d 369 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 363 1.5E-113 T 13-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN78_08910 707ce6ac1c6123a7189893c9b8365e3d 369 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 14 368 25.622 T 13-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN78_04845 427d78e4e723381dccd5908bdba048c5 386 SUPERFAMILY SSF53067 80 359 8.2E-25 T 13-10-2018 BEN78_04845 427d78e4e723381dccd5908bdba048c5 386 Gene3D G3DSA:3.30.420.40 19 381 2.8E-122 T 13-10-2018 BEN78_04845 427d78e4e723381dccd5908bdba048c5 386 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 12 386 41.568 T 13-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 BEN78_04845 427d78e4e723381dccd5908bdba048c5 386 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 13 386 1.6E-140 T 13-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 BEN78_04845 427d78e4e723381dccd5908bdba048c5 386 Gene3D G3DSA:3.30.420.40 164 346 2.8E-122 T 13-10-2018 BEN78_10620 29072b359add6e7c0fe5cc1287a89016 84 Gene3D G3DSA:3.40.1620.10 1 50 1.3E-23 T 13-10-2018 BEN78_10620 29072b359add6e7c0fe5cc1287a89016 84 SUPERFAMILY SSF143120 1 49 2.09E-13 T 13-10-2018 IPR036165 YefM-like superfamily BEN78_10620 29072b359add6e7c0fe5cc1287a89016 84 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 61 1.6E-19 T 13-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM BEN78_10620 29072b359add6e7c0fe5cc1287a89016 84 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 3 54 2.7E-17 T 13-10-2018 BEN78_12575 23be756eb3416ce1e3e337873a19b357 284 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 20 265 9.5E-99 T 13-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 BEN78_12575 23be756eb3416ce1e3e337873a19b357 284 Hamap MF_02040 Iron-sulfur cluster carrier protein. 8 266 38.098 T 13-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein BEN78_12575 23be756eb3416ce1e3e337873a19b357 284 SUPERFAMILY SSF52540 22 266 1.52E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_12575 23be756eb3416ce1e3e337873a19b357 284 Gene3D G3DSA:3.40.50.300 14 262 7.1E-81 T 13-10-2018 BEN78_08305 6f886ec58c98e1d0521a3dc1fc028dd5 358 SMART SM01240 39 355 0.0098 T 13-10-2018 BEN78_08305 6f886ec58c98e1d0521a3dc1fc028dd5 358 Hamap MF_00354 Isopentenyl-diphosphate delta-isomerase [fni]. 13 351 39.013 T 13-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 BEN78_08305 6f886ec58c98e1d0521a3dc1fc028dd5 358 Gene3D G3DSA:3.20.20.70 12 353 2.4E-117 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_08305 6f886ec58c98e1d0521a3dc1fc028dd5 358 PIRSF PIRSF003314 11 353 5.1E-118 T 13-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 BEN78_08305 6f886ec58c98e1d0521a3dc1fc028dd5 358 TIGRFAM TIGR02151 IPP_isom_2: isopentenyl-diphosphate delta-isomerase, type 2 16 346 3.0E-113 T 13-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 BEN78_08305 6f886ec58c98e1d0521a3dc1fc028dd5 358 Pfam PF01070 FMN-dependent dehydrogenase 38 113 4.6E-6 T 13-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 BEN78_08305 6f886ec58c98e1d0521a3dc1fc028dd5 358 Pfam PF01070 FMN-dependent dehydrogenase 185 344 2.6E-14 T 13-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 BEN78_08305 6f886ec58c98e1d0521a3dc1fc028dd5 358 SUPERFAMILY SSF51395 37 349 4.89E-71 T 13-10-2018 BEN78_15125 3af6e1e68301c564f455e2e64c7f2f3f 86 Gene3D G3DSA:1.10.260.40 7 71 7.3E-16 T 13-10-2018 BEN78_15125 3af6e1e68301c564f455e2e64c7f2f3f 86 Pfam PF13560 Helix-turn-helix domain 13 68 3.5E-11 T 13-10-2018 BEN78_15125 3af6e1e68301c564f455e2e64c7f2f3f 86 SUPERFAMILY SSF47413 9 73 9.65E-17 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN78_15125 3af6e1e68301c564f455e2e64c7f2f3f 86 SMART SM00530 17 72 2.9E-7 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN78_04145 41b045a823521b15447a07e6dc9fdd46 538 Pfam PF00795 Carbon-nitrogen hydrolase 232 494 2.6E-28 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 BEN78_04145 41b045a823521b15447a07e6dc9fdd46 538 Pfam PF00583 Acetyltransferase (GNAT) family 51 140 1.2E-5 T 13-10-2018 IPR000182 GNAT domain BEN78_04145 41b045a823521b15447a07e6dc9fdd46 538 SUPERFAMILY SSF55729 11 195 2.59E-18 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN78_04145 41b045a823521b15447a07e6dc9fdd46 538 Gene3D G3DSA:3.60.110.10 229 520 4.0E-54 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily BEN78_04145 41b045a823521b15447a07e6dc9fdd46 538 Gene3D G3DSA:3.40.630.30 5 220 5.3E-49 T 13-10-2018 BEN78_04145 41b045a823521b15447a07e6dc9fdd46 538 SUPERFAMILY SSF56317 228 503 8.5E-56 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily BEN78_09620 9844bcab8789d7368670ab4741caf0a3 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 142 159 2.3E-20 T 13-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial BEN78_09620 9844bcab8789d7368670ab4741caf0a3 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 199 209 2.3E-20 T 13-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial BEN78_09620 9844bcab8789d7368670ab4741caf0a3 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 222 237 2.3E-20 T 13-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial BEN78_09620 9844bcab8789d7368670ab4741caf0a3 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 210 221 2.3E-20 T 13-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial BEN78_09620 9844bcab8789d7368670ab4741caf0a3 287 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 18 123 4.2E-36 T 13-10-2018 IPR010627 Peptidase A24A, N-terminal BEN78_09620 9844bcab8789d7368670ab4741caf0a3 287 Pfam PF01478 Type IV leader peptidase family 133 241 1.9E-22 T 13-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 BEN78_16015 b3d786ae01c80f3eff06288e8348b673 350 SUPERFAMILY SSF53067 158 315 3.15E-17 T 13-10-2018 BEN78_16015 b3d786ae01c80f3eff06288e8348b673 350 Pfam PF00480 ROK family 185 347 2.0E-5 T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BEN78_16015 b3d786ae01c80f3eff06288e8348b673 350 Gene3D G3DSA:3.30.420.40 183 346 2.8E-17 T 13-10-2018 BEN78_00055 0c94aef2d83edec8620f364516cc9cd5 402 SUPERFAMILY SSF56601 25 399 1.98E-88 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BEN78_00055 0c94aef2d83edec8620f364516cc9cd5 402 Pfam PF00144 Beta-lactamase 30 388 7.6E-66 T 13-10-2018 IPR001466 Beta-lactamase-related BEN78_00055 0c94aef2d83edec8620f364516cc9cd5 402 Gene3D G3DSA:3.40.710.10 11 401 2.2E-113 T 13-10-2018 BEN78_06520 94e5d6276c677ea382792393340d4eeb 230 SUPERFAMILY SSF55120 3 221 1.06E-54 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN78_06520 94e5d6276c677ea382792393340d4eeb 230 Pfam PF00849 RNA pseudouridylate synthase 12 162 4.8E-27 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN78_06520 94e5d6276c677ea382792393340d4eeb 230 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 51 65 - T 13-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN78_06520 94e5d6276c677ea382792393340d4eeb 230 Gene3D G3DSA:3.30.2350.10 1 214 9.6E-53 T 13-10-2018 BEN78_02465 bee2d4acc1de9950d4f0009402c445ec 116 Pfam PF00355 Rieske [2Fe-2S] domain 33 99 1.2E-10 T 13-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 BEN78_02465 bee2d4acc1de9950d4f0009402c445ec 116 Gene3D G3DSA:2.102.10.10 10 116 1.7E-16 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BEN78_02465 bee2d4acc1de9950d4f0009402c445ec 116 SUPERFAMILY SSF50022 29 115 1.44E-21 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BEN78_02775 26698105581a931d0c15803f9f4ee3f9 332 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 13-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 BEN78_02775 26698105581a931d0c15803f9f4ee3f9 332 Pfam PF01136 Peptidase family U32 75 328 9.2E-58 T 13-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 BEN78_02245 684acb11c6e41b91f5d461727ea699b1 117 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 28 90 4.6E-23 T 13-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain BEN78_02245 684acb11c6e41b91f5d461727ea699b1 117 SUPERFAMILY SSF47781 28 93 9.45E-25 T 13-10-2018 IPR010994 RuvA domain 2-like BEN78_02245 684acb11c6e41b91f5d461727ea699b1 117 Pfam PF12836 Helix-hairpin-helix motif 28 89 5.2E-21 T 13-10-2018 BEN78_02245 684acb11c6e41b91f5d461727ea699b1 117 Gene3D G3DSA:1.10.150.280 24 92 3.1E-18 T 13-10-2018 BEN78_11145 0c380689cc7dafb5ea2a079e0b40dcee 180 SUPERFAMILY SSF55282 4 180 3.06E-77 T 13-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11145 0c380689cc7dafb5ea2a079e0b40dcee 180 ProSitePatterns PS00358 Ribosomal protein L5 signature. 58 74 - T 13-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11145 0c380689cc7dafb5ea2a079e0b40dcee 180 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 2 180 43.867 T 13-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_11145 0c380689cc7dafb5ea2a079e0b40dcee 180 Pfam PF00673 ribosomal L5P family C-terminus 85 178 3.5E-41 T 13-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11145 0c380689cc7dafb5ea2a079e0b40dcee 180 Gene3D G3DSA:3.30.1440.10 1 180 1.1E-78 T 13-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11145 0c380689cc7dafb5ea2a079e0b40dcee 180 Pfam PF00281 Ribosomal protein L5 25 81 6.3E-27 T 13-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_11145 0c380689cc7dafb5ea2a079e0b40dcee 180 PIRSF PIRSF002161 1 180 2.1E-65 T 13-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_13455 8ec1ed9a1e134c79febf1596b34f2282 1170 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1153 4.6E-65 T 13-10-2018 IPR003395 RecF/RecN/SMC, N-terminal BEN78_13455 8ec1ed9a1e134c79febf1596b34f2282 1170 PIRSF PIRSF005719 1 1168 3.9E-260 T 13-10-2018 IPR024704 Structural maintenance of chromosomes protein BEN78_13455 8ec1ed9a1e134c79febf1596b34f2282 1170 Gene3D G3DSA:3.40.50.300 1008 1169 8.4E-43 T 13-10-2018 BEN78_13455 8ec1ed9a1e134c79febf1596b34f2282 1170 SUPERFAMILY SSF52540 1 1162 4.02E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_13455 8ec1ed9a1e134c79febf1596b34f2282 1170 SMART SM00968 521 622 4.5E-4 T 13-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 BEN78_13455 8ec1ed9a1e134c79febf1596b34f2282 1170 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1162 23.189 T 13-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 BEN78_13455 8ec1ed9a1e134c79febf1596b34f2282 1170 Gene3D G3DSA:3.40.50.300 1 216 8.8E-51 T 13-10-2018 BEN78_13455 8ec1ed9a1e134c79febf1596b34f2282 1170 SUPERFAMILY SSF75553 485 670 1.14E-11 T 13-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 BEN78_13455 8ec1ed9a1e134c79febf1596b34f2282 1170 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1160 0.0 T 13-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 BEN78_01230 a40fe57bdf562094cecf09a4110cba1c 409 Pfam PF04235 Protein of unknown function (DUF418) 236 397 2.0E-46 T 13-10-2018 IPR007349 Domain of unknown function DUF418 BEN78_08215 62021ee32ade9350c09844bb8d8cde55 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 34 90 8.3E-6 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BEN78_08215 62021ee32ade9350c09844bb8d8cde55 326 Gene3D G3DSA:3.90.180.10 20 323 6.8E-99 T 13-10-2018 BEN78_08215 62021ee32ade9350c09844bb8d8cde55 326 Pfam PF13602 Zinc-binding dehydrogenase 186 323 1.3E-27 T 13-10-2018 BEN78_08215 62021ee32ade9350c09844bb8d8cde55 326 SUPERFAMILY SSF51735 114 288 4.72E-46 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_08215 62021ee32ade9350c09844bb8d8cde55 326 SUPERFAMILY SSF50129 12 142 1.37E-34 T 13-10-2018 IPR011032 GroES-like superfamily BEN78_08215 62021ee32ade9350c09844bb8d8cde55 326 Gene3D G3DSA:3.40.50.720 123 262 6.8E-99 T 13-10-2018 BEN78_08215 62021ee32ade9350c09844bb8d8cde55 326 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 6 325 9.5E-125 T 13-10-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 BEN78_08215 62021ee32ade9350c09844bb8d8cde55 326 SMART SM00829 16 323 1.7E-35 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BEN78_02540 120335c2ee4e2a73acd6b9a3d7971355 214 Gene3D G3DSA:1.10.150.240 17 83 1.1E-58 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BEN78_02540 120335c2ee4e2a73acd6b9a3d7971355 214 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 184 6.2E-30 T 13-10-2018 BEN78_02540 120335c2ee4e2a73acd6b9a3d7971355 214 Gene3D G3DSA:3.40.50.1000 6 205 1.1E-58 T 13-10-2018 IPR023214 HAD superfamily BEN78_02540 120335c2ee4e2a73acd6b9a3d7971355 214 SUPERFAMILY SSF56784 4 212 7.07E-53 T 13-10-2018 IPR036412 HAD-like superfamily BEN78_13140 43c9f16b145eaed4108611c66497a199 237 SUPERFAMILY SSF53098 1 176 1.88E-51 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily BEN78_13140 43c9f16b145eaed4108611c66497a199 237 Pfam PF00929 Exonuclease 4 166 5.5E-32 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BEN78_13140 43c9f16b145eaed4108611c66497a199 237 SMART SM00479 2 175 8.7E-42 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BEN78_13140 43c9f16b145eaed4108611c66497a199 237 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 4 180 4.9E-54 T 13-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN78_13140 43c9f16b145eaed4108611c66497a199 237 Gene3D G3DSA:3.30.420.10 1 179 1.2E-52 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BEN78_13140 43c9f16b145eaed4108611c66497a199 237 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 229 3.4E-89 T 13-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN78_08060 d142ffa935464f0f22d938b7d2f9093c 554 Gene3D G3DSA:3.10.310.50 265 457 5.7E-13 T 13-10-2018 BEN78_08060 d142ffa935464f0f22d938b7d2f9093c 554 Pfam PF04536 TPM domain 277 363 8.5E-10 T 13-10-2018 IPR007621 TPM domain BEN78_14680 035ef69855e584ec2d5a6613cb2b2120 438 SUPERFAMILY SSF55785 91 209 4.65E-8 T 13-10-2018 IPR035965 PAS domain superfamily BEN78_14680 035ef69855e584ec2d5a6613cb2b2120 438 Pfam PF07730 Histidine kinase 240 305 2.7E-11 T 13-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 BEN78_14680 035ef69855e584ec2d5a6613cb2b2120 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 393 8.4E-6 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_14680 035ef69855e584ec2d5a6613cb2b2120 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 412 8.4E-6 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_14680 035ef69855e584ec2d5a6613cb2b2120 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 431 8.4E-6 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_14680 035ef69855e584ec2d5a6613cb2b2120 438 SUPERFAMILY SSF55874 316 431 3.01E-17 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_14680 035ef69855e584ec2d5a6613cb2b2120 438 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 345 432 1.4E-6 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_14680 035ef69855e584ec2d5a6613cb2b2120 438 Gene3D G3DSA:3.30.565.10 311 433 4.0E-32 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_14680 035ef69855e584ec2d5a6613cb2b2120 438 Gene3D G3DSA:3.30.450.20 90 209 4.6E-9 T 13-10-2018 BEN78_14680 035ef69855e584ec2d5a6613cb2b2120 438 SMART SM00387 343 434 1.5E-9 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_05630 619a2fd0c6e45013bf35e0cced8968d4 282 PRINTS PR00412 Epoxide hydrolase signature 50 65 2.6E-5 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BEN78_05630 619a2fd0c6e45013bf35e0cced8968d4 282 PRINTS PR00412 Epoxide hydrolase signature 110 123 2.6E-5 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BEN78_05630 619a2fd0c6e45013bf35e0cced8968d4 282 PRINTS PR00412 Epoxide hydrolase signature 257 279 2.6E-5 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BEN78_05630 619a2fd0c6e45013bf35e0cced8968d4 282 Gene3D G3DSA:3.40.50.1820 7 276 3.3E-57 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_05630 619a2fd0c6e45013bf35e0cced8968d4 282 Pfam PF12697 Alpha/beta hydrolase family 28 275 6.8E-19 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN78_05630 619a2fd0c6e45013bf35e0cced8968d4 282 PRINTS PR00111 Alpha/beta hydrolase fold signature 50 65 3.2E-6 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN78_05630 619a2fd0c6e45013bf35e0cced8968d4 282 PRINTS PR00111 Alpha/beta hydrolase fold signature 96 109 3.2E-6 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN78_05630 619a2fd0c6e45013bf35e0cced8968d4 282 PRINTS PR00111 Alpha/beta hydrolase fold signature 110 123 3.2E-6 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN78_05630 619a2fd0c6e45013bf35e0cced8968d4 282 SUPERFAMILY SSF53474 13 282 2.87E-48 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_09480 930acf4ce080371749cffc1c3b7ca8d6 154 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 15 142 3.2E-37 T 13-10-2018 IPR011605 NusB antitermination factor GO:0006353 BEN78_09480 930acf4ce080371749cffc1c3b7ca8d6 154 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 13 144 20.515 T 13-10-2018 IPR011605 NusB antitermination factor GO:0006353 BEN78_09480 930acf4ce080371749cffc1c3b7ca8d6 154 Gene3D G3DSA:1.10.940.10 9 147 2.4E-40 T 13-10-2018 IPR035926 NusB-like superfamily BEN78_09480 930acf4ce080371749cffc1c3b7ca8d6 154 Pfam PF01029 NusB family 17 140 6.3E-29 T 13-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 BEN78_09480 930acf4ce080371749cffc1c3b7ca8d6 154 SUPERFAMILY SSF48013 13 144 4.19E-37 T 13-10-2018 IPR035926 NusB-like superfamily BEN78_03465 177d0fa76379eff7c2629363fef20587 227 PIRSF PIRSF001461 1 226 2.0E-103 T 13-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 BEN78_03465 177d0fa76379eff7c2629363fef20587 227 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 BEN78_03465 177d0fa76379eff7c2629363fef20587 227 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 3.3E-91 T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 BEN78_03465 177d0fa76379eff7c2629363fef20587 227 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 6 216 2.2E-96 T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 BEN78_03465 177d0fa76379eff7c2629363fef20587 227 Gene3D G3DSA:3.20.20.70 5 222 1.2E-84 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_03465 177d0fa76379eff7c2629363fef20587 227 SUPERFAMILY SSF51366 4 220 1.75E-73 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BEN78_03465 177d0fa76379eff7c2629363fef20587 227 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 BEN78_01215 c433f112053bab49ea0a78ed25247f19 140 Pfam PF01850 PIN domain 1 124 1.4E-5 T 13-10-2018 IPR002716 PIN domain BEN78_01215 c433f112053bab49ea0a78ed25247f19 140 TIGRFAM TIGR00028 Mtu_PIN_fam: toxin-antitoxin system PIN domain toxin 1 124 1.5E-29 T 13-10-2018 IPR006226 PIN domain toxin GO:0016788 BEN78_01215 c433f112053bab49ea0a78ed25247f19 140 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 1 134 11.97 T 13-10-2018 IPR022907 VapC family GO:0004540 BEN78_01215 c433f112053bab49ea0a78ed25247f19 140 SUPERFAMILY SSF88723 1 125 2.39E-12 T 13-10-2018 IPR029060 PIN-like domain superfamily BEN78_08865 c9b17079020fb9ce4fa93eb5881e7f45 494 PIRSF PIRSF006603 7 468 1.1E-110 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BEN78_08865 c9b17079020fb9ce4fa93eb5881e7f45 494 Pfam PF01554 MatE 260 421 2.0E-23 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BEN78_08865 c9b17079020fb9ce4fa93eb5881e7f45 494 Pfam PF01554 MatE 31 191 5.0E-26 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BEN78_08865 c9b17079020fb9ce4fa93eb5881e7f45 494 TIGRFAM TIGR00797 matE: MATE efflux family protein 31 433 4.6E-66 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BEN78_01465 6a231b0b775419c9d458c96da19c8dd0 172 Pfam PF14317 YcxB-like protein 110 166 4.0E-12 T 13-10-2018 IPR025588 YcxB-like protein BEN78_01620 fc86af911090c3016b108d5f9653a253 134 Pfam PF01124 MAPEG family 7 124 4.8E-23 T 13-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein BEN78_01620 fc86af911090c3016b108d5f9653a253 134 Gene3D G3DSA:1.20.120.550 4 133 3.0E-21 T 13-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily BEN78_01620 fc86af911090c3016b108d5f9653a253 134 SUPERFAMILY SSF161084 6 128 7.32E-23 T 13-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily BEN78_14580 a695192df7f5beb95cf50ee1d3d3b548 465 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 224 446 3.5E-44 T 13-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 BEN78_14580 a695192df7f5beb95cf50ee1d3d3b548 465 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 13 121 6.4E-14 T 13-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 BEN78_13685 1b2725091ef56cb48926cc64a6797a0f 191 Pfam PF00293 NUDIX domain 54 166 2.0E-9 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BEN78_13685 1b2725091ef56cb48926cc64a6797a0f 191 Gene3D G3DSA:3.90.79.10 11 187 1.7E-40 T 13-10-2018 BEN78_13685 1b2725091ef56cb48926cc64a6797a0f 191 SUPERFAMILY SSF55811 45 167 8.53E-16 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BEN78_06580 9a91e24ca41ea861ee50a194de2a2bcb 158 Pfam PF04657 Putative inner membrane exporter, YdcZ 13 149 1.5E-39 T 13-10-2018 IPR006750 Putative inner membrane exporter, YdcZ BEN78_15460 77bfe773a02605c779632dd1057c368d 247 Gene3D G3DSA:3.40.50.720 1 245 9.4E-82 T 13-10-2018 BEN78_15460 77bfe773a02605c779632dd1057c368d 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BEN78_15460 77bfe773a02605c779632dd1057c368d 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 243 1.2E-63 T 13-10-2018 BEN78_15460 77bfe773a02605c779632dd1057c368d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 5.4E-48 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_15460 77bfe773a02605c779632dd1057c368d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 5.4E-48 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_15460 77bfe773a02605c779632dd1057c368d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 5.4E-48 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_15460 77bfe773a02605c779632dd1057c368d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 5.4E-48 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_15460 77bfe773a02605c779632dd1057c368d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 5.4E-48 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_15460 77bfe773a02605c779632dd1057c368d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.4E-48 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_15460 77bfe773a02605c779632dd1057c368d 247 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 6 245 1.1E-99 T 13-10-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 BEN78_15460 77bfe773a02605c779632dd1057c368d 247 SUPERFAMILY SSF51735 6 245 4.31E-81 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_15460 77bfe773a02605c779632dd1057c368d 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 184 1.5E-7 T 13-10-2018 BEN78_15460 77bfe773a02605c779632dd1057c368d 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 8.2E-15 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_15460 77bfe773a02605c779632dd1057c368d 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 8.2E-15 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_15460 77bfe773a02605c779632dd1057c368d 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 8.2E-15 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_16845 824159d3ce4fd71ea1675ade347f171c 296 Pfam PF02625 XdhC and CoxI family 1 52 4.7E-9 T 13-10-2018 IPR003777 XdhC- CoxI BEN78_16845 824159d3ce4fd71ea1675ade347f171c 296 Gene3D G3DSA:3.40.50.720 151 296 8.6E-25 T 13-10-2018 BEN78_16845 824159d3ce4fd71ea1675ade347f171c 296 Pfam PF13478 XdhC Rossmann domain 152 288 8.5E-22 T 13-10-2018 IPR027051 XdhC Rossmann domain BEN78_02745 850b9dc67d657d15d35ad6e29f5e4aa2 327 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 5 324 8.2E-135 T 13-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 BEN78_02745 850b9dc67d657d15d35ad6e29f5e4aa2 327 SUPERFAMILY SSF51679 3 323 1.96E-82 T 13-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 BEN78_02745 850b9dc67d657d15d35ad6e29f5e4aa2 327 Pfam PF00296 Luciferase-like monooxygenase 17 295 3.5E-36 T 13-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 BEN78_02745 850b9dc67d657d15d35ad6e29f5e4aa2 327 Gene3D G3DSA:3.20.20.30 1 327 2.8E-99 T 13-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 BEN78_01140 f9c17bcb208115897f7c0a47597fc2d9 237 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 109 116 - T 13-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 BEN78_01140 f9c17bcb208115897f7c0a47597fc2d9 237 Gene3D G3DSA:3.90.550.10 6 236 3.3E-66 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_01140 f9c17bcb208115897f7c0a47597fc2d9 237 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 10 231 1.1E-68 T 13-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 BEN78_01140 f9c17bcb208115897f7c0a47597fc2d9 237 SUPERFAMILY SSF53448 9 232 9.53E-52 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_01140 f9c17bcb208115897f7c0a47597fc2d9 237 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 10 233 1.6E-63 T 13-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 BEN78_01140 f9c17bcb208115897f7c0a47597fc2d9 237 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 8 233 40.176 T 13-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 BEN78_11785 6d9ae93eb2837aad0dcac99b909efa53 335 Pfam PF07007 Lysozyme inhibitor LprI 245 305 1.8E-4 T 13-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal BEN78_03505 62c27a20db0cd5ff52add931a1d6b8ab 509 Pfam PF00361 Proton-conducting membrane transporter 127 423 7.4E-35 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_03505 62c27a20db0cd5ff52add931a1d6b8ab 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 235 259 3.4E-9 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_03505 62c27a20db0cd5ff52add931a1d6b8ab 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 132 151 3.4E-9 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_03505 62c27a20db0cd5ff52add931a1d6b8ab 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 380 406 3.4E-9 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_03505 62c27a20db0cd5ff52add931a1d6b8ab 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 162 186 3.4E-9 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_05725 1c80874a3b75347aae1cd40ec4b5512c 415 Pfam PF01757 Acyltransferase family 4 373 4.6E-21 T 13-10-2018 IPR002656 Acyltransferase 3 GO:0016747 BEN78_05785 74a6a72107937e9e49eab97c5d849b64 221 Pfam PF12146 Serine aminopeptidase, S33 50 142 1.1E-7 T 13-10-2018 IPR022742 Serine aminopeptidase, S33 BEN78_05785 74a6a72107937e9e49eab97c5d849b64 221 Gene3D G3DSA:3.40.50.1820 2 220 7.9E-62 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_05785 74a6a72107937e9e49eab97c5d849b64 221 SUPERFAMILY SSF53474 11 209 1.77E-46 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_09895 5bb52c6446ee628252425e5d0cae191e 1372 SUPERFAMILY SSF101967 792 861 6.67E-5 T 13-10-2018 BEN78_09895 5bb52c6446ee628252425e5d0cae191e 1372 SUPERFAMILY SSF101967 1284 1364 2.75E-11 T 13-10-2018 BEN78_09895 5bb52c6446ee628252425e5d0cae191e 1372 Gene3D G3DSA:1.20.5.170 1182 1266 7.4E-14 T 13-10-2018 BEN78_09895 5bb52c6446ee628252425e5d0cae191e 1372 Gene3D G3DSA:1.20.5.170 1006 1099 7.9E-10 T 13-10-2018 BEN78_09895 5bb52c6446ee628252425e5d0cae191e 1372 Gene3D G3DSA:1.20.5.170 608 699 1.7E-20 T 13-10-2018 BEN78_09895 5bb52c6446ee628252425e5d0cae191e 1372 Gene3D G3DSA:1.20.5.170 897 986 2.1E-19 T 13-10-2018 BEN78_09895 5bb52c6446ee628252425e5d0cae191e 1372 Gene3D G3DSA:1.20.5.170 428 521 4.8E-9 T 13-10-2018 BEN78_09895 5bb52c6446ee628252425e5d0cae191e 1372 Gene3D G3DSA:1.20.5.170 717 810 3.4E-10 T 13-10-2018 BEN78_09895 5bb52c6446ee628252425e5d0cae191e 1372 Gene3D G3DSA:2.150.10.10 1283 1371 5.1E-13 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_09895 5bb52c6446ee628252425e5d0cae191e 1372 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 2.4E-8 T 13-10-2018 IPR024973 ESPR domain BEN78_09895 5bb52c6446ee628252425e5d0cae191e 1372 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 430 458 2.7E-4 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_09895 5bb52c6446ee628252425e5d0cae191e 1372 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1128 1157 1.0E-5 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_09895 5bb52c6446ee628252425e5d0cae191e 1372 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 609 651 3.8E-5 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_09895 5bb52c6446ee628252425e5d0cae191e 1372 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1008 1036 0.0022 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_09895 5bb52c6446ee628252425e5d0cae191e 1372 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 839 872 8.9E-7 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_09895 5bb52c6446ee628252425e5d0cae191e 1372 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 550 589 8.0E-7 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_09895 5bb52c6446ee628252425e5d0cae191e 1372 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 898 940 3.6E-5 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_09895 5bb52c6446ee628252425e5d0cae191e 1372 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1182 1216 0.081 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_09895 5bb52c6446ee628252425e5d0cae191e 1372 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 719 747 0.008 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_09895 5bb52c6446ee628252425e5d0cae191e 1372 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 371 411 1.7E-8 T 13-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BEN78_09895 5bb52c6446ee628252425e5d0cae191e 1372 Gene3D G3DSA:2.150.10.10 241 394 1.0E-23 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_09895 5bb52c6446ee628252425e5d0cae191e 1372 SUPERFAMILY SSF101967 248 392 1.44E-17 T 13-10-2018 BEN78_07920 fef0a9e328bad46ca409c0f438575d62 259 SUPERFAMILY SSF53901 31 176 1.85E-10 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 BEN78_07920 fef0a9e328bad46ca409c0f438575d62 259 Gene3D G3DSA:3.40.47.10 2 181 2.7E-6 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 BEN78_07920 fef0a9e328bad46ca409c0f438575d62 259 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 36 245 1.6E-31 T 13-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal BEN78_05180 7bfa9b57ef51fc1a09c1d7077402b655 192 Gene3D G3DSA:3.90.1720.10 26 182 2.6E-14 T 13-10-2018 BEN78_05180 7bfa9b57ef51fc1a09c1d7077402b655 192 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 28 157 1.1E-16 T 13-10-2018 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family BEN78_05180 7bfa9b57ef51fc1a09c1d7077402b655 192 SUPERFAMILY SSF54001 26 182 3.6E-27 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BEN78_10505 62cee14d88601d793ca1f04dba1345a3 184 ProSitePatterns PS00194 Thioredoxin family active site. 72 90 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 BEN78_10505 62cee14d88601d793ca1f04dba1345a3 184 Gene3D G3DSA:3.40.30.10 12 180 2.9E-34 T 13-10-2018 BEN78_10505 62cee14d88601d793ca1f04dba1345a3 184 Pfam PF00578 AhpC/TSA family 49 160 4.2E-14 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BEN78_10505 62cee14d88601d793ca1f04dba1345a3 184 SUPERFAMILY SSF52833 4 177 3.94E-31 T 13-10-2018 IPR036249 Thioredoxin-like superfamily BEN78_15200 0173e078cc4775d2879c8709e958bb0e 255 Pfam PF13391 HNH endonuclease 153 206 9.9E-6 T 13-10-2018 IPR003615 HNH nuclease BEN78_04680 0accdd9bd2dc475fd1e2006a3c0c5dd2 345 SUPERFAMILY SSF56112 29 314 3.5E-45 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily BEN78_04680 0accdd9bd2dc475fd1e2006a3c0c5dd2 345 Gene3D G3DSA:3.30.200.20 13 102 2.8E-18 T 13-10-2018 BEN78_04680 0accdd9bd2dc475fd1e2006a3c0c5dd2 345 Pfam PF01636 Phosphotransferase enzyme family 38 257 5.5E-27 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase BEN78_04680 0accdd9bd2dc475fd1e2006a3c0c5dd2 345 Gene3D G3DSA:3.90.1200.10 103 341 4.8E-66 T 13-10-2018 BEN78_07865 5bec188cbaee03cd0174bd143ce57657 236 Pfam PF01553 Acyltransferase 55 180 7.4E-26 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BEN78_07865 5bec188cbaee03cd0174bd143ce57657 236 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 59 180 6.0E-34 T 13-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 BEN78_07865 5bec188cbaee03cd0174bd143ce57657 236 SUPERFAMILY SSF69593 41 235 4.18E-42 T 13-10-2018 BEN78_07865 5bec188cbaee03cd0174bd143ce57657 236 SMART SM00563 69 183 9.9E-37 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BEN78_01835 e806f3ef94e61ebb4fe27315dead496f 543 Gene3D G3DSA:3.20.20.80 7 431 1.7E-84 T 13-10-2018 BEN78_01835 e806f3ef94e61ebb4fe27315dead496f 543 SMART SM00642 17 429 9.6E-24 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BEN78_01835 e806f3ef94e61ebb4fe27315dead496f 543 Pfam PF00128 Alpha amylase, catalytic domain 61 393 1.8E-37 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BEN78_01835 e806f3ef94e61ebb4fe27315dead496f 543 SUPERFAMILY SSF51445 7 438 4.15E-68 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily BEN78_11490 fafd6691782c22f294e0be796879c7b0 570 Gene3D G3DSA:3.80.10.10 287 438 1.5E-26 T 13-10-2018 IPR032675 Leucine-rich repeat domain superfamily BEN78_11490 fafd6691782c22f294e0be796879c7b0 570 Gene3D G3DSA:3.80.10.10 143 286 7.2E-28 T 13-10-2018 IPR032675 Leucine-rich repeat domain superfamily BEN78_11490 fafd6691782c22f294e0be796879c7b0 570 SUPERFAMILY SSF52058 146 353 1.04E-33 T 13-10-2018 BEN78_11490 fafd6691782c22f294e0be796879c7b0 570 Gene3D G3DSA:3.80.10.10 439 563 1.4E-18 T 13-10-2018 IPR032675 Leucine-rich repeat domain superfamily BEN78_11490 fafd6691782c22f294e0be796879c7b0 570 SUPERFAMILY SSF52058 323 553 9.52E-34 T 13-10-2018 BEN78_11490 fafd6691782c22f294e0be796879c7b0 570 Pfam PF12799 Leucine Rich repeats (2 copies) 297 338 2.9E-6 T 13-10-2018 IPR025875 Leucine rich repeat 4 BEN78_13425 bc3d0e45bb26c3b4680048b703cfe570 217 Pfam PF01081 KDPG and KHG aldolase 10 201 2.6E-67 T 13-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 BEN78_13425 bc3d0e45bb26c3b4680048b703cfe570 217 SUPERFAMILY SSF51569 6 211 1.03E-62 T 13-10-2018 BEN78_13425 bc3d0e45bb26c3b4680048b703cfe570 217 Gene3D G3DSA:3.20.20.70 1 214 3.9E-71 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_13425 bc3d0e45bb26c3b4680048b703cfe570 217 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 9 209 2.4E-75 T 13-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 BEN78_13425 bc3d0e45bb26c3b4680048b703cfe570 217 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 40 49 - T 13-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 BEN78_02510 3d91203acc7fe2513220262ec7a1da65 349 SUPERFAMILY SSF111369 36 252 1.29E-42 T 13-10-2018 BEN78_02510 3d91203acc7fe2513220262ec7a1da65 349 Gene3D G3DSA:1.10.287.470 81 140 1.5E-76 T 13-10-2018 BEN78_02510 3d91203acc7fe2513220262ec7a1da65 349 Gene3D G3DSA:2.40.30.170 35 256 1.5E-76 T 13-10-2018 BEN78_02510 3d91203acc7fe2513220262ec7a1da65 349 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 22 326 3.3E-74 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BEN78_02510 3d91203acc7fe2513220262ec7a1da65 349 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 33 246 1.5E-32 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BEN78_02510 3d91203acc7fe2513220262ec7a1da65 349 Gene3D G3DSA:2.40.50.100 46 174 1.5E-76 T 13-10-2018 BEN78_02510 3d91203acc7fe2513220262ec7a1da65 349 Gene3D G3DSA:2.40.420.20 257 325 1.5E-76 T 13-10-2018 BEN78_07935 30e93787f78f761220ad66e11b09e6e8 601 Pfam PF05960 Bacterial protein of unknown function (DUF885) 59 587 5.6E-85 T 13-10-2018 IPR010281 Protein of unknown function DUF885 BEN78_01325 5562769c66bd6bc0482dbb0ddbbe1e73 444 Pfam PF01523 Putative modulator of DNA gyrase 25 310 8.9E-50 T 13-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 BEN78_01325 5562769c66bd6bc0482dbb0ddbbe1e73 444 Gene3D G3DSA:3.30.2290.10 4 214 2.6E-15 T 13-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal BEN78_01325 5562769c66bd6bc0482dbb0ddbbe1e73 444 SUPERFAMILY SSF111283 9 438 4.58E-89 T 13-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 BEN78_15885 5f7765673d2b5d0964e4fe924759fdfc 336 Pfam PF04909 Amidohydrolase 4 330 9.4E-55 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BEN78_15885 5f7765673d2b5d0964e4fe924759fdfc 336 Gene3D G3DSA:3.20.20.140 2 333 7.4E-106 T 13-10-2018 BEN78_15885 5f7765673d2b5d0964e4fe924759fdfc 336 SUPERFAMILY SSF51556 3 333 6.49E-89 T 13-10-2018 IPR032466 Metal-dependent hydrolase BEN78_15925 69d2656bfb43e3a371d1374c428d2166 432 PIRSF PIRSF004640 22 427 4.6E-124 T 13-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 BEN78_15925 69d2656bfb43e3a371d1374c428d2166 432 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 28 417 3.2E-115 T 13-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 BEN78_15925 69d2656bfb43e3a371d1374c428d2166 432 Gene3D G3DSA:3.30.413.10 312 429 1.7E-35 T 13-10-2018 BEN78_15925 69d2656bfb43e3a371d1374c428d2166 432 Pfam PF04551 GcpE protein 31 418 6.7E-107 T 13-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 BEN78_15925 69d2656bfb43e3a371d1374c428d2166 432 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 26 420 28.679 T 13-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 BEN78_15925 69d2656bfb43e3a371d1374c428d2166 432 Gene3D G3DSA:3.20.20.20 25 311 1.4E-92 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BEN78_04610 f12db5a6899b877bceb7e31c87e0d740 209 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 12 191 3.8E-27 T 13-10-2018 IPR013830 SGNH hydrolase-type esterase domain BEN78_04610 f12db5a6899b877bceb7e31c87e0d740 209 Gene3D G3DSA:3.40.50.1110 9 203 8.2E-27 T 13-10-2018 IPR036514 SGNH hydrolase superfamily BEN78_04610 f12db5a6899b877bceb7e31c87e0d740 209 SUPERFAMILY SSF52266 6 200 4.89E-30 T 13-10-2018 BEN78_14515 82e76bdca23dd4bd93179c6753d446fe 148 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 5 139 1.4E-22 T 13-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 BEN78_14515 82e76bdca23dd4bd93179c6753d446fe 148 Pfam PF02050 Flagellar FliJ protein 19 137 2.9E-21 T 13-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 BEN78_14615 bed65018dc38709ce56a10ee6ff1db73 232 Hamap MF_00415 Flagellar L-ring protein [flgH]. 8 229 25.835 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BEN78_14615 bed65018dc38709ce56a10ee6ff1db73 232 PRINTS PR01008 Flagellar L-ring protein signature 208 222 1.1E-22 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BEN78_14615 bed65018dc38709ce56a10ee6ff1db73 232 PRINTS PR01008 Flagellar L-ring protein signature 72 84 1.1E-22 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BEN78_14615 bed65018dc38709ce56a10ee6ff1db73 232 PRINTS PR01008 Flagellar L-ring protein signature 192 206 1.1E-22 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BEN78_14615 bed65018dc38709ce56a10ee6ff1db73 232 PRINTS PR01008 Flagellar L-ring protein signature 145 160 1.1E-22 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BEN78_14615 bed65018dc38709ce56a10ee6ff1db73 232 PRINTS PR01008 Flagellar L-ring protein signature 171 187 1.1E-22 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BEN78_14615 bed65018dc38709ce56a10ee6ff1db73 232 Pfam PF02107 Flagellar L-ring protein 50 229 3.3E-57 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BEN78_08590 9ecf9964e5c692792ed7e81106057e6d 275 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN78_08590 9ecf9964e5c692792ed7e81106057e6d 275 Gene3D G3DSA:3.40.50.300 2 256 4.1E-56 T 13-10-2018 BEN78_08590 9ecf9964e5c692792ed7e81106057e6d 275 SUPERFAMILY SSF52540 8 245 3.85E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_08590 9ecf9964e5c692792ed7e81106057e6d 275 SMART SM00382 36 241 4.3E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_08590 9ecf9964e5c692792ed7e81106057e6d 275 Pfam PF00005 ABC transporter 27 184 3.4E-21 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_05225 ebfdc6e19ecadb1993c48b1788cd10a0 112 Gene3D G3DSA:3.30.310.50 17 112 3.9E-25 T 13-10-2018 BEN78_05225 ebfdc6e19ecadb1993c48b1788cd10a0 112 Pfam PF09981 Uncharacterized protein conserved in bacteria (DUF2218) 21 110 1.4E-20 T 13-10-2018 IPR014543 Uncharacterised conserved protein UCP028291 BEN78_07195 a8ca7b484fc9c0438116dfe7959e8fd3 207 Pfam PF02698 DUF218 domain 45 190 6.2E-32 T 13-10-2018 IPR003848 Domain of unknown function DUF218 BEN78_07195 a8ca7b484fc9c0438116dfe7959e8fd3 207 Gene3D G3DSA:3.40.50.620 90 173 1.1E-7 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_04785 4ce6cc45ed2597663d7e1b834d16b1fc 118 SMART SM00905 4 114 7.8E-47 T 13-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 BEN78_04785 4ce6cc45ed2597663d7e1b834d16b1fc 118 TIGRFAM TIGR00526 folB_dom: FolB domain 1 117 1.8E-31 T 13-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 BEN78_04785 4ce6cc45ed2597663d7e1b834d16b1fc 118 Pfam PF02152 Dihydroneopterin aldolase 4 113 1.4E-30 T 13-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 BEN78_04785 4ce6cc45ed2597663d7e1b834d16b1fc 118 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 114 9.9E-25 T 13-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 BEN78_04785 4ce6cc45ed2597663d7e1b834d16b1fc 118 SUPERFAMILY SSF55620 1 116 1.17E-35 T 13-10-2018 BEN78_04785 4ce6cc45ed2597663d7e1b834d16b1fc 118 Gene3D G3DSA:3.30.1130.10 1 117 3.5E-41 T 13-10-2018 BEN78_05195 63b66868ff97675df0406bad96b5c4e7 104 Pfam PF12823 Domain of unknown function (DUF3817) 6 93 2.8E-20 T 13-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane BEN78_05195 63b66868ff97675df0406bad96b5c4e7 104 TIGRFAM TIGR03954 integ_memb_HG: integral membrane protein 8 91 9.1E-22 T 13-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane BEN78_04075 2761c227725f349917303e502494626b 286 Gene3D G3DSA:1.10.287.80 6 282 5.0E-109 T 13-10-2018 BEN78_04075 2761c227725f349917303e502494626b 286 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.6E-36 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_04075 2761c227725f349917303e502494626b 286 PRINTS PR00126 ATP synthase gamma subunit signature 264 285 1.6E-36 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_04075 2761c227725f349917303e502494626b 286 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.6E-36 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_04075 2761c227725f349917303e502494626b 286 PRINTS PR00126 ATP synthase gamma subunit signature 233 252 1.6E-36 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_04075 2761c227725f349917303e502494626b 286 Gene3D G3DSA:3.40.1380.10 61 205 5.0E-109 T 13-10-2018 BEN78_04075 2761c227725f349917303e502494626b 286 Pfam PF00231 ATP synthase 5 285 2.8E-95 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_04075 2761c227725f349917303e502494626b 286 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 286 36.328 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_04075 2761c227725f349917303e502494626b 286 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 286 7.9E-104 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_04075 2761c227725f349917303e502494626b 286 SUPERFAMILY SSF52943 3 286 8.89E-93 T 13-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_04075 2761c227725f349917303e502494626b 286 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 272 285 - T 13-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN78_06860 bce7072b6abb5351824cc33316bfb84b 52 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 52 20.535 T 13-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 BEN78_06860 bce7072b6abb5351824cc33316bfb84b 52 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 5.4E-16 T 13-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 BEN78_06860 bce7072b6abb5351824cc33316bfb84b 52 PIRSF PIRSF036466 1 52 3.4E-22 T 13-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 BEN78_01840 af5363a2f25a96df6bac4e70e0377ff5 492 Gene3D G3DSA:1.20.1250.20 299 491 1.2E-12 T 13-10-2018 BEN78_01840 af5363a2f25a96df6bac4e70e0377ff5 492 Gene3D G3DSA:1.20.1250.20 10 209 1.8E-15 T 13-10-2018 BEN78_01840 af5363a2f25a96df6bac4e70e0377ff5 492 SUPERFAMILY SSF103473 11 489 9.59E-39 T 13-10-2018 IPR036259 MFS transporter superfamily BEN78_01840 af5363a2f25a96df6bac4e70e0377ff5 492 Pfam PF07690 Major Facilitator Superfamily 17 448 3.2E-20 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN78_15245 51a2a6e05a5354b7076580128c9c74fc 297 SUPERFAMILY SSF51735 129 289 1.71E-45 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_15245 51a2a6e05a5354b7076580128c9c74fc 297 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 11 127 4.1E-35 T 13-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BEN78_15245 51a2a6e05a5354b7076580128c9c74fc 297 SUPERFAMILY SSF53223 9 128 6.91E-37 T 13-10-2018 BEN78_15245 51a2a6e05a5354b7076580128c9c74fc 297 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 130 289 1.3E-62 T 13-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BEN78_15245 51a2a6e05a5354b7076580128c9c74fc 297 Hamap MF_01576 Bifunctional protein FolD [folD]. 9 291 36.514 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BEN78_15245 51a2a6e05a5354b7076580128c9c74fc 297 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 268 276 - T 13-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BEN78_15245 51a2a6e05a5354b7076580128c9c74fc 297 Gene3D G3DSA:3.40.50.10860 14 285 4.3E-100 T 13-10-2018 BEN78_15245 51a2a6e05a5354b7076580128c9c74fc 297 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 212 241 5.9E-81 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BEN78_15245 51a2a6e05a5354b7076580128c9c74fc 297 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 116 137 5.9E-81 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BEN78_15245 51a2a6e05a5354b7076580128c9c74fc 297 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 247 263 5.9E-81 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BEN78_15245 51a2a6e05a5354b7076580128c9c74fc 297 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 264 282 5.9E-81 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BEN78_15245 51a2a6e05a5354b7076580128c9c74fc 297 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 161 181 5.9E-81 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BEN78_15245 51a2a6e05a5354b7076580128c9c74fc 297 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 81 108 5.9E-81 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BEN78_15245 51a2a6e05a5354b7076580128c9c74fc 297 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 40 62 5.9E-81 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BEN78_15245 51a2a6e05a5354b7076580128c9c74fc 297 Gene3D G3DSA:3.40.50.720 12 267 4.3E-100 T 13-10-2018 BEN78_15245 51a2a6e05a5354b7076580128c9c74fc 297 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 82 107 - T 13-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BEN78_16770 3ddff3211055757eb3bbdc827bd5dfca 315 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 9 306 1.2E-37 T 13-10-2018 IPR020801 Polyketide synthase, acyl transferase domain BEN78_16770 3ddff3211055757eb3bbdc827bd5dfca 315 Pfam PF00698 Acyl transferase domain 8 284 7.2E-41 T 13-10-2018 IPR014043 Acyl transferase BEN78_16770 3ddff3211055757eb3bbdc827bd5dfca 315 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 5 293 2.3E-101 T 13-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 BEN78_16770 3ddff3211055757eb3bbdc827bd5dfca 315 Gene3D G3DSA:3.40.366.10 8 289 1.3E-97 T 13-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 BEN78_16770 3ddff3211055757eb3bbdc827bd5dfca 315 SUPERFAMILY SSF52151 6 311 4.97E-73 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BEN78_16770 3ddff3211055757eb3bbdc827bd5dfca 315 Gene3D G3DSA:3.30.70.250 127 200 1.3E-97 T 13-10-2018 BEN78_16770 3ddff3211055757eb3bbdc827bd5dfca 315 PIRSF PIRSF000446 3 312 1.0E-102 T 13-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 BEN78_16770 3ddff3211055757eb3bbdc827bd5dfca 315 SUPERFAMILY SSF55048 132 195 4.84E-16 T 13-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding BEN78_10450 84d2764b4277b85fc5ecbc4dae514aa3 426 Gene3D G3DSA:3.40.50.720 1 245 1.8E-37 T 13-10-2018 BEN78_10450 84d2764b4277b85fc5ecbc4dae514aa3 426 SUPERFAMILY SSF51735 2 261 2.78E-40 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_10450 84d2764b4277b85fc5ecbc4dae514aa3 426 Pfam PF13781 DoxX-like family 312 412 4.7E-28 T 13-10-2018 IPR025695 DoxX-like family BEN78_10450 84d2764b4277b85fc5ecbc4dae514aa3 426 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 197 2.2E-12 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 BEN78_09230 9ffe21d2700577c5c3b0d4dd31b37e5b 88 Pfam PF01541 GIY-YIG catalytic domain 7 76 3.4E-13 T 13-10-2018 IPR000305 GIY-YIG endonuclease BEN78_09230 9ffe21d2700577c5c3b0d4dd31b37e5b 88 Gene3D G3DSA:3.40.1440.10 2 88 2.5E-29 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 BEN78_09230 9ffe21d2700577c5c3b0d4dd31b37e5b 88 SUPERFAMILY SSF82771 6 77 3.53E-11 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 BEN78_15535 6a0a38e3f31bbe885360d542995ac9b9 88 Pfam PF13828 Domain of unknown function (DUF4190) 7 69 6.9E-23 T 13-10-2018 IPR025241 Domain of unknown function DUF4190 BEN78_08815 ac5e526029f67b4daf5240115c82bc62 373 Pfam PF13437 HlyD family secretion protein 230 348 1.9E-13 T 13-10-2018 BEN78_08815 ac5e526029f67b4daf5240115c82bc62 373 Gene3D G3DSA:2.40.30.170 244 365 7.8E-38 T 13-10-2018 BEN78_08815 ac5e526029f67b4daf5240115c82bc62 373 Gene3D G3DSA:1.10.287.470 126 230 9.0E-6 T 13-10-2018 BEN78_08815 ac5e526029f67b4daf5240115c82bc62 373 Pfam PF13533 Biotin-lipoyl like 63 110 3.0E-8 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain BEN78_08815 ac5e526029f67b4daf5240115c82bc62 373 SUPERFAMILY SSF111369 64 139 9.29E-9 T 13-10-2018 BEN78_08815 ac5e526029f67b4daf5240115c82bc62 373 SUPERFAMILY SSF111369 203 300 2.88E-12 T 13-10-2018 BEN78_08815 ac5e526029f67b4daf5240115c82bc62 373 Gene3D G3DSA:1.10.287.470 97 125 2.9E-12 T 13-10-2018 BEN78_08815 ac5e526029f67b4daf5240115c82bc62 373 Gene3D G3DSA:2.40.50.100 66 96 2.9E-12 T 13-10-2018 BEN78_15450 813cb3743a4675298147642856b03986 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BEN78_15450 813cb3743a4675298147642856b03986 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.9E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_15450 813cb3743a4675298147642856b03986 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.9E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_15450 813cb3743a4675298147642856b03986 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.9E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_15450 813cb3743a4675298147642856b03986 246 Pfam PF00106 short chain dehydrogenase 5 195 1.1E-61 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_15450 813cb3743a4675298147642856b03986 246 SUPERFAMILY SSF51735 4 244 1.68E-82 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_15450 813cb3743a4675298147642856b03986 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 4 244 1.5E-116 T 13-10-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 BEN78_15450 813cb3743a4675298147642856b03986 246 Gene3D G3DSA:3.40.50.720 1 244 5.0E-82 T 13-10-2018 BEN78_15450 813cb3743a4675298147642856b03986 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 183 1.9E-5 T 13-10-2018 BEN78_15450 813cb3743a4675298147642856b03986 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.1E-44 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_15450 813cb3743a4675298147642856b03986 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.1E-44 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_15450 813cb3743a4675298147642856b03986 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.1E-44 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_15450 813cb3743a4675298147642856b03986 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 1.1E-44 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_15450 813cb3743a4675298147642856b03986 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.1E-44 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_15450 813cb3743a4675298147642856b03986 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.1E-44 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN78_14915 eb31f05c9b97420107ec738518d2b09b 392 SUPERFAMILY SSF51556 52 386 2.42E-77 T 13-10-2018 IPR032466 Metal-dependent hydrolase BEN78_14915 eb31f05c9b97420107ec738518d2b09b 392 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 56 382 1.2E-82 T 13-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 BEN78_14915 eb31f05c9b97420107ec738518d2b09b 392 Gene3D G3DSA:3.20.20.140 51 386 2.1E-100 T 13-10-2018 BEN78_02415 1896d81f8748442420830671c32fe550 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 388 4.0E-5 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_02415 1896d81f8748442420830671c32fe550 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 425 4.0E-5 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_02415 1896d81f8748442420830671c32fe550 446 SMART SM00387 342 445 3.7E-24 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_02415 1896d81f8748442420830671c32fe550 446 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 350 441 3.3E-15 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_02415 1896d81f8748442420830671c32fe550 446 SMART SM00388 236 302 4.2E-18 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_02415 1896d81f8748442420830671c32fe550 446 Gene3D G3DSA:3.30.565.10 303 444 5.6E-25 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_02415 1896d81f8748442420830671c32fe550 446 SUPERFAMILY SSF47384 219 302 1.82E-16 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN78_02415 1896d81f8748442420830671c32fe550 446 Gene3D G3DSA:1.10.287.130 186 302 3.8E-20 T 13-10-2018 BEN78_02415 1896d81f8748442420830671c32fe550 446 SUPERFAMILY SSF55874 304 443 1.31E-26 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_02415 1896d81f8748442420830671c32fe550 446 Pfam PF00512 His Kinase A (phospho-acceptor) domain 238 302 1.5E-15 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_15060 c125dfbf8d2ed1028f72bcb4922bb903 64 Pfam PF07869 Protein of unknown function (DUF1656) 4 58 5.0E-21 T 13-10-2018 IPR012451 Protein of unknown function DUF1656 BEN78_14670 aacc2dd65cb1cc8ec0fe6403123c214a 389 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 279 383 3.0E-22 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_14670 aacc2dd65cb1cc8ec0fe6403123c214a 389 Gene3D G3DSA:3.30.565.10 239 387 3.0E-46 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_14670 aacc2dd65cb1cc8ec0fe6403123c214a 389 SUPERFAMILY SSF55874 225 385 1.44E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_14670 aacc2dd65cb1cc8ec0fe6403123c214a 389 Gene3D G3DSA:1.10.287.130 110 230 5.4E-24 T 13-10-2018 BEN78_14670 aacc2dd65cb1cc8ec0fe6403123c214a 389 SMART SM00387 276 384 4.7E-32 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN78_14670 aacc2dd65cb1cc8ec0fe6403123c214a 389 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 381 2.4E-19 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_14670 aacc2dd65cb1cc8ec0fe6403123c214a 389 PRINTS PR00344 Bacterial sensor protein C-terminal signature 313 327 2.4E-19 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_14670 aacc2dd65cb1cc8ec0fe6403123c214a 389 PRINTS PR00344 Bacterial sensor protein C-terminal signature 331 341 2.4E-19 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_14670 aacc2dd65cb1cc8ec0fe6403123c214a 389 PRINTS PR00344 Bacterial sensor protein C-terminal signature 344 362 2.4E-19 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN78_14670 aacc2dd65cb1cc8ec0fe6403123c214a 389 Pfam PF00512 His Kinase A (phospho-acceptor) domain 134 234 2.5E-9 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN78_14670 aacc2dd65cb1cc8ec0fe6403123c214a 389 SUPERFAMILY SSF47384 115 234 1.75E-7 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN78_02720 7e941f6122a883fde348ed1b982f03b9 332 SUPERFAMILY SSF74653 242 328 1.57E-11 T 13-10-2018 BEN78_02720 7e941f6122a883fde348ed1b982f03b9 332 Gene3D G3DSA:3.30.1150.10 204 332 3.2E-17 T 13-10-2018 BEN78_02720 7e941f6122a883fde348ed1b982f03b9 332 TIGRFAM TIGR02794 tolA_full: protein TolA 10 329 4.2E-25 T 13-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 BEN78_02720 7e941f6122a883fde348ed1b982f03b9 332 Pfam PF13103 TonB C terminal 244 326 4.4E-9 T 13-10-2018 BEN78_12245 0a58c6ee3df6b4344c6c0f26b26fc935 104 Gene3D G3DSA:1.10.3730.20 1 104 9.7E-32 T 13-10-2018 BEN78_12245 0a58c6ee3df6b4344c6c0f26b26fc935 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 1.6E-28 T 13-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 BEN78_12245 0a58c6ee3df6b4344c6c0f26b26fc935 104 SUPERFAMILY SSF103481 5 103 8.63E-19 T 13-10-2018 BEN78_09595 9e412ff0680ff7815f842ebdc00c5090 157 Pfam PF05258 Protein of unknown function (DUF721) 29 109 2.4E-10 T 13-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 BEN78_15380 2f363abc5ae97e96701c6f7938da5c20 271 Gene3D G3DSA:2.70.70.10 116 271 8.1E-46 T 13-10-2018 IPR011055 Duplicated hybrid motif BEN78_15380 2f363abc5ae97e96701c6f7938da5c20 271 Pfam PF01551 Peptidase family M23 170 265 3.7E-28 T 13-10-2018 IPR016047 Peptidase M23 BEN78_15380 2f363abc5ae97e96701c6f7938da5c20 271 SUPERFAMILY SSF51261 75 269 1.15E-50 T 13-10-2018 IPR011055 Duplicated hybrid motif BEN78_00200 4b83dcf53920654b30f26607d919e139 263 SMART SM00052 21 250 7.5E-25 T 13-10-2018 IPR001633 EAL domain BEN78_00200 4b83dcf53920654b30f26607d919e139 263 Gene3D G3DSA:3.20.20.450 22 256 4.7E-64 T 13-10-2018 IPR035919 EAL domain superfamily BEN78_00200 4b83dcf53920654b30f26607d919e139 263 Pfam PF00563 EAL domain 29 245 2.2E-47 T 13-10-2018 IPR001633 EAL domain BEN78_00200 4b83dcf53920654b30f26607d919e139 263 SUPERFAMILY SSF141868 29 246 4.97E-57 T 13-10-2018 IPR035919 EAL domain superfamily BEN78_06140 f5783e499cc87b594b41db09664b97a4 262 SUPERFAMILY SSF110997 185 259 4.84E-15 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 BEN78_06140 f5783e499cc87b594b41db09664b97a4 262 Pfam PF05036 Sporulation related domain 187 259 3.3E-14 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 BEN78_06140 f5783e499cc87b594b41db09664b97a4 262 Gene3D G3DSA:3.30.70.1070 182 260 1.9E-15 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 BEN78_12395 85f50cc49484aab94ccc327d813d116b 368 SUPERFAMILY SSF56059 150 328 4.8E-16 T 13-10-2018 BEN78_12395 85f50cc49484aab94ccc327d813d116b 368 Gene3D G3DSA:3.30.470.20 226 338 8.2E-10 T 13-10-2018 BEN78_09945 63cc81daa1d571e2dfbf0c3c98880347 224 Pfam PF04350 Pilus assembly protein, PilO 51 205 7.6E-50 T 13-10-2018 IPR007445 Pilus assembly protein, PilO BEN78_09945 63cc81daa1d571e2dfbf0c3c98880347 224 PIRSF PIRSF016482 2 220 3.6E-73 T 13-10-2018 IPR007445 Pilus assembly protein, PilO BEN78_09945 63cc81daa1d571e2dfbf0c3c98880347 224 Gene3D G3DSA:3.30.70.60 96 214 7.9E-33 T 13-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 BEN78_09945 63cc81daa1d571e2dfbf0c3c98880347 224 Gene3D G3DSA:1.10.287.540 59 95 4.1E-8 T 13-10-2018 BEN78_11165 43f67b3843e0d8d091e75a08518b21ee 118 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 4 118 5.8E-38 T 13-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_11165 43f67b3843e0d8d091e75a08518b21ee 118 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 4 118 4.1E-37 T 13-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_11165 43f67b3843e0d8d091e75a08518b21ee 118 Gene3D G3DSA:3.30.420.100 3 118 3.7E-42 T 13-10-2018 BEN78_11165 43f67b3843e0d8d091e75a08518b21ee 118 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 3 118 26.514 T 13-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN78_11165 43f67b3843e0d8d091e75a08518b21ee 118 SUPERFAMILY SSF53137 4 116 2.62E-50 T 13-10-2018 BEN78_11400 5703c91e3a114395b05b58d83d2a6d89 341 Pfam PF13575 Domain of unknown function (DUF4135) 110 327 2.5E-56 T 13-10-2018 IPR025410 Lantibiotic biosynthesis protein, dehydration domain BEN78_02875 065b6240df9dab8a5fe1a4f03fdb5a46 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.3E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_02875 065b6240df9dab8a5fe1a4f03fdb5a46 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.3E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_02875 065b6240df9dab8a5fe1a4f03fdb5a46 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.3E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_02875 065b6240df9dab8a5fe1a4f03fdb5a46 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 5.8E-21 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN78_02875 065b6240df9dab8a5fe1a4f03fdb5a46 304 Pfam PF03466 LysR substrate binding domain 91 286 3.2E-37 T 13-10-2018 IPR005119 LysR, substrate-binding BEN78_02875 065b6240df9dab8a5fe1a4f03fdb5a46 304 Gene3D G3DSA:3.40.190.10 163 257 3.4E-62 T 13-10-2018 BEN78_02875 065b6240df9dab8a5fe1a4f03fdb5a46 304 SUPERFAMILY SSF53850 93 287 9.46E-35 T 13-10-2018 BEN78_02875 065b6240df9dab8a5fe1a4f03fdb5a46 304 Gene3D G3DSA:3.40.190.10 99 283 3.4E-62 T 13-10-2018 BEN78_02875 065b6240df9dab8a5fe1a4f03fdb5a46 304 SUPERFAMILY SSF46785 4 86 2.1E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_02875 065b6240df9dab8a5fe1a4f03fdb5a46 304 Gene3D G3DSA:1.10.10.10 6 95 1.9E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_14015 99a952ed540ac83fb4ef49ab5059bb75 99 SUPERFAMILY SSF46785 1 74 3.23E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_14015 99a952ed540ac83fb4ef49ab5059bb75 99 Pfam PF12840 Helix-turn-helix domain 2 61 9.6E-16 T 13-10-2018 BEN78_14015 99a952ed540ac83fb4ef49ab5059bb75 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 5 20 1.3E-11 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BEN78_14015 99a952ed540ac83fb4ef49ab5059bb75 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 37 52 1.3E-11 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BEN78_14015 99a952ed540ac83fb4ef49ab5059bb75 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 24 35 1.3E-11 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BEN78_14015 99a952ed540ac83fb4ef49ab5059bb75 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 52 67 1.3E-11 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BEN78_14015 99a952ed540ac83fb4ef49ab5059bb75 99 Gene3D G3DSA:1.10.10.10 1 97 8.7E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_14015 99a952ed540ac83fb4ef49ab5059bb75 99 SMART SM00418 3 82 1.2E-18 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BEN78_04565 854ab79673db41a479a712c6fa28eed2 451 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 306 329 - T 13-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site BEN78_04565 854ab79673db41a479a712c6fa28eed2 451 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 13 439 37.78 T 13-10-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 BEN78_04565 854ab79673db41a479a712c6fa28eed2 451 Pfam PF00375 Sodium:dicarboxylate symporter family 20 412 1.4E-104 T 13-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BEN78_04565 854ab79673db41a479a712c6fa28eed2 451 Gene3D G3DSA:1.10.3860.10 11 426 5.6E-120 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BEN78_04565 854ab79673db41a479a712c6fa28eed2 451 PRINTS PR00173 Glutamate-aspartate symporter signature 203 222 2.3E-25 T 13-10-2018 BEN78_04565 854ab79673db41a479a712c6fa28eed2 451 PRINTS PR00173 Glutamate-aspartate symporter signature 18 38 2.3E-25 T 13-10-2018 BEN78_04565 854ab79673db41a479a712c6fa28eed2 451 PRINTS PR00173 Glutamate-aspartate symporter signature 156 178 2.3E-25 T 13-10-2018 BEN78_04565 854ab79673db41a479a712c6fa28eed2 451 PRINTS PR00173 Glutamate-aspartate symporter signature 338 357 2.3E-25 T 13-10-2018 BEN78_04565 854ab79673db41a479a712c6fa28eed2 451 PRINTS PR00173 Glutamate-aspartate symporter signature 85 110 2.3E-25 T 13-10-2018 BEN78_04565 854ab79673db41a479a712c6fa28eed2 451 PRINTS PR00173 Glutamate-aspartate symporter signature 303 329 2.3E-25 T 13-10-2018 BEN78_04565 854ab79673db41a479a712c6fa28eed2 451 SUPERFAMILY SSF118215 20 413 5.62E-116 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BEN78_04565 854ab79673db41a479a712c6fa28eed2 451 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 47 62 - T 13-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site BEN78_03715 d00d1fad0d8ac459729cbb3f8ea5678e 631 Pfam PF02446 4-alpha-glucanotransferase 304 611 9.3E-68 T 13-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 BEN78_03715 d00d1fad0d8ac459729cbb3f8ea5678e 631 Pfam PF02446 4-alpha-glucanotransferase 151 296 9.1E-9 T 13-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 BEN78_03715 d00d1fad0d8ac459729cbb3f8ea5678e 631 SUPERFAMILY SSF51445 144 623 7.03E-109 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily BEN78_03715 d00d1fad0d8ac459729cbb3f8ea5678e 631 Gene3D G3DSA:3.20.20.80 293 627 2.4E-83 T 13-10-2018 BEN78_10495 3d363798415227a9bdd1ec5fd34d2f66 197 Gene3D G3DSA:3.40.50.360 1 197 3.7E-62 T 13-10-2018 IPR029039 Flavoprotein-like superfamily BEN78_10495 3d363798415227a9bdd1ec5fd34d2f66 197 Pfam PF03358 NADPH-dependent FMN reductase 13 138 1.3E-9 T 13-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 BEN78_10495 3d363798415227a9bdd1ec5fd34d2f66 197 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 4 195 9.2E-49 T 13-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 BEN78_10495 3d363798415227a9bdd1ec5fd34d2f66 197 SUPERFAMILY SSF52218 1 195 1.31E-55 T 13-10-2018 IPR029039 Flavoprotein-like superfamily BEN78_09065 304f05a853eab6f74a3ed1d85a4375a3 538 Pfam PF00990 Diguanylate cyclase, GGDEF domain 372 529 5.4E-43 T 13-10-2018 IPR000160 GGDEF domain BEN78_09065 304f05a853eab6f74a3ed1d85a4375a3 538 Gene3D G3DSA:3.30.70.270 358 533 2.3E-53 T 13-10-2018 BEN78_09065 304f05a853eab6f74a3ed1d85a4375a3 538 SMART SM00267 361 533 7.9E-51 T 13-10-2018 IPR000160 GGDEF domain BEN78_09065 304f05a853eab6f74a3ed1d85a4375a3 538 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 370 532 1.9E-42 T 13-10-2018 IPR000160 GGDEF domain BEN78_09065 304f05a853eab6f74a3ed1d85a4375a3 538 SUPERFAMILY SSF55073 377 530 5.65E-44 T 13-10-2018 IPR029787 Nucleotide cyclase BEN78_09065 304f05a853eab6f74a3ed1d85a4375a3 538 Pfam PF07695 7TM diverse intracellular signalling 159 323 4.6E-7 T 13-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 BEN78_10200 f5be5eafae3bfeed77b813b63ccb77d5 126 Pfam PF01219 Prokaryotic diacylglycerol kinase 21 121 2.2E-33 T 13-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 BEN78_10200 f5be5eafae3bfeed77b813b63ccb77d5 126 Gene3D G3DSA:1.10.3830.10 9 125 5.5E-36 T 13-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 BEN78_11620 71db0609e1779bb8e9a9bfe561f12fc0 313 Pfam PF00892 EamA-like transporter family 146 287 1.5E-13 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BEN78_11620 71db0609e1779bb8e9a9bfe561f12fc0 313 Pfam PF00892 EamA-like transporter family 13 136 3.9E-9 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BEN78_11620 71db0609e1779bb8e9a9bfe561f12fc0 313 SUPERFAMILY SSF103481 205 287 8.5E-7 T 13-10-2018 BEN78_11620 71db0609e1779bb8e9a9bfe561f12fc0 313 SUPERFAMILY SSF103481 42 137 3.27E-7 T 13-10-2018 BEN78_02260 307d5442fcf6dfbafab51f8b6ce13121 234 SUPERFAMILY SSF53448 1 230 2.7E-52 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_02260 307d5442fcf6dfbafab51f8b6ce13121 234 Gene3D G3DSA:3.90.550.10 1 233 2.1E-55 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_02260 307d5442fcf6dfbafab51f8b6ce13121 234 Pfam PF00483 Nucleotidyl transferase 2 118 5.0E-15 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 BEN78_07870 dd8b4ea5773770227792076154258440 102 Gene3D G3DSA:3.10.129.10 2 101 1.1E-15 T 13-10-2018 BEN78_07870 dd8b4ea5773770227792076154258440 102 SUPERFAMILY SSF54637 6 99 1.64E-12 T 13-10-2018 IPR029069 HotDog domain superfamily BEN78_16310 1b159cf853a71f2dc4b36ba95d5da357 89 SUPERFAMILY SSF57997 31 82 1.18E-5 T 13-10-2018 BEN78_16310 1b159cf853a71f2dc4b36ba95d5da357 89 Gene3D G3DSA:3.90.20.10 24 85 2.4E-5 T 13-10-2018 BEN78_00110 72ed7772d11996309c54887cf0a79400 619 SUPERFAMILY SSF52540 226 383 9.19E-16 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_00110 72ed7772d11996309c54887cf0a79400 619 Pfam PF09848 Uncharacterized conserved protein (DUF2075) 264 609 5.3E-94 T 13-10-2018 IPR018647 Domain of unknown function DUF2075 BEN78_00110 72ed7772d11996309c54887cf0a79400 619 Gene3D G3DSA:3.40.50.300 212 423 5.1E-11 T 13-10-2018 BEN78_05035 6fb354d684619dc11bb21e452f762490 163 Pfam PF04892 VanZ like family 75 140 1.7E-10 T 13-10-2018 IPR006976 VanZ-like BEN78_01245 48633acf725cdd396599948d8e992175 211 Pfam PF00877 NlpC/P60 family 100 207 1.9E-31 T 13-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain BEN78_01245 48633acf725cdd396599948d8e992175 211 SUPERFAMILY SSF54001 82 209 7.36E-45 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BEN78_01245 48633acf725cdd396599948d8e992175 211 Gene3D G3DSA:3.90.1720.10 13 205 1.2E-45 T 13-10-2018 BEN78_01155 ab436baf6f6056f00d55fafc4c7cdca9 277 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 13 268 6.1E-128 T 13-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 BEN78_01155 ab436baf6f6056f00d55fafc4c7cdca9 277 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 8 270 53.064 T 13-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 BEN78_01155 ab436baf6f6056f00d55fafc4c7cdca9 277 SUPERFAMILY SSF51569 2 270 7.24E-107 T 13-10-2018 BEN78_01155 ab436baf6f6056f00d55fafc4c7cdca9 277 Gene3D G3DSA:3.20.20.70 3 276 1.5E-103 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_01155 ab436baf6f6056f00d55fafc4c7cdca9 277 Pfam PF00793 DAHP synthetase I family 8 267 7.0E-66 T 13-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 BEN78_04320 44ec3d388e990b228cd8921da04dda74 433 Pfam PF01882 Protein of unknown function DUF58 190 275 1.1E-22 T 13-10-2018 IPR002881 Domain of unknown function DUF58 BEN78_04320 44ec3d388e990b228cd8921da04dda74 433 SUPERFAMILY SSF53300 231 360 5.78E-5 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BEN78_04890 96ea0342ecd0cc2c0b1f5d7252b759ff 540 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 34 475 4.1E-147 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_04890 96ea0342ecd0cc2c0b1f5d7252b759ff 540 SUPERFAMILY SSF81442 22 528 7.59E-187 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_04890 96ea0342ecd0cc2c0b1f5d7252b759ff 540 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 253 307 - T 13-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_04890 96ea0342ecd0cc2c0b1f5d7252b759ff 540 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 26 527 4.8E-204 T 13-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 BEN78_04890 96ea0342ecd0cc2c0b1f5d7252b759ff 540 Gene3D G3DSA:1.20.210.10 11 531 2.3E-212 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_04890 96ea0342ecd0cc2c0b1f5d7252b759ff 540 PRINTS PR01165 Cytochrome c oxidase subunit I signature 356 374 3.4E-123 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_04890 96ea0342ecd0cc2c0b1f5d7252b759ff 540 PRINTS PR01165 Cytochrome c oxidase subunit I signature 72 95 3.4E-123 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_04890 96ea0342ecd0cc2c0b1f5d7252b759ff 540 PRINTS PR01165 Cytochrome c oxidase subunit I signature 171 189 3.4E-123 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_04890 96ea0342ecd0cc2c0b1f5d7252b759ff 540 PRINTS PR01165 Cytochrome c oxidase subunit I signature 200 219 3.4E-123 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_04890 96ea0342ecd0cc2c0b1f5d7252b759ff 540 PRINTS PR01165 Cytochrome c oxidase subunit I signature 99 123 3.4E-123 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_04890 96ea0342ecd0cc2c0b1f5d7252b759ff 540 PRINTS PR01165 Cytochrome c oxidase subunit I signature 321 342 3.4E-123 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_04890 96ea0342ecd0cc2c0b1f5d7252b759ff 540 PRINTS PR01165 Cytochrome c oxidase subunit I signature 25 50 3.4E-123 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_04890 96ea0342ecd0cc2c0b1f5d7252b759ff 540 PRINTS PR01165 Cytochrome c oxidase subunit I signature 297 312 3.4E-123 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_04890 96ea0342ecd0cc2c0b1f5d7252b759ff 540 PRINTS PR01165 Cytochrome c oxidase subunit I signature 384 403 3.4E-123 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_04890 96ea0342ecd0cc2c0b1f5d7252b759ff 540 PRINTS PR01165 Cytochrome c oxidase subunit I signature 434 455 3.4E-123 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_04890 96ea0342ecd0cc2c0b1f5d7252b759ff 540 PRINTS PR01165 Cytochrome c oxidase subunit I signature 142 154 3.4E-123 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_04890 96ea0342ecd0cc2c0b1f5d7252b759ff 540 PRINTS PR01165 Cytochrome c oxidase subunit I signature 251 272 3.4E-123 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_11470 e4c86830d52a536db3405648391d9388 425 Gene3D G3DSA:3.30.1360.180 258 359 3.7E-135 T 13-10-2018 BEN78_11470 e4c86830d52a536db3405648391d9388 425 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 45 362 1.1E-81 T 13-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 BEN78_11470 e4c86830d52a536db3405648391d9388 425 SUPERFAMILY SSF53649 35 402 8.0E-96 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BEN78_11470 e4c86830d52a536db3405648391d9388 425 Gene3D G3DSA:3.40.720.10 45 410 3.7E-135 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BEN78_14445 951dc8bbd753c857d7b92a1352257054 130 Pfam PF00072 Response regulator receiver domain 7 119 1.6E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_14445 951dc8bbd753c857d7b92a1352257054 130 Gene3D G3DSA:3.40.50.12740 4 129 1.4E-39 T 13-10-2018 BEN78_14445 951dc8bbd753c857d7b92a1352257054 130 SUPERFAMILY SSF52172 3 125 3.42E-38 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_14445 951dc8bbd753c857d7b92a1352257054 130 SMART SM00448 5 119 3.1E-35 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_02655 8834b2878bca5e67b01032dc58c38e92 354 SUPERFAMILY SSF56935 13 329 1.6E-6 T 13-10-2018 BEN78_07245 833495f92dae5b8bfa029d6fc431a94e 246 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN78_07245 833495f92dae5b8bfa029d6fc431a94e 246 SMART SM00382 26 220 3.6E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_07245 833495f92dae5b8bfa029d6fc431a94e 246 Pfam PF00005 ABC transporter 17 162 2.3E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_07245 833495f92dae5b8bfa029d6fc431a94e 246 SUPERFAMILY SSF52540 3 237 1.21E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_07245 833495f92dae5b8bfa029d6fc431a94e 246 Gene3D G3DSA:3.40.50.300 3 246 1.9E-74 T 13-10-2018 BEN78_03755 148d780c23f7a69671ab909a344a9edd 253 Pfam PF11906 Protein of unknown function (DUF3426) 109 251 6.5E-40 T 13-10-2018 IPR021834 Protein of unknown function DUF3426 BEN78_06995 482238f434de94c84bc0d2a90f57ca26 360 Pfam PF04333 MlaA lipoprotein 127 318 5.8E-72 T 13-10-2018 IPR007428 MlaA lipoprotein GO:0016020 BEN78_06995 482238f434de94c84bc0d2a90f57ca26 360 PRINTS PR01805 VacJ lipoprotein signature 232 249 4.4E-24 T 13-10-2018 IPR007428 MlaA lipoprotein GO:0016020 BEN78_06995 482238f434de94c84bc0d2a90f57ca26 360 PRINTS PR01805 VacJ lipoprotein signature 128 141 4.4E-24 T 13-10-2018 IPR007428 MlaA lipoprotein GO:0016020 BEN78_06995 482238f434de94c84bc0d2a90f57ca26 360 PRINTS PR01805 VacJ lipoprotein signature 145 161 4.4E-24 T 13-10-2018 IPR007428 MlaA lipoprotein GO:0016020 BEN78_06995 482238f434de94c84bc0d2a90f57ca26 360 PRINTS PR01805 VacJ lipoprotein signature 196 213 4.4E-24 T 13-10-2018 IPR007428 MlaA lipoprotein GO:0016020 BEN78_02555 9c63759dbdb81c42fd7c73e65bde0889 907 PIRSF PIRSF035905 505 724 3200.0 T 13-10-2018 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein BEN78_02555 9c63759dbdb81c42fd7c73e65bde0889 907 PIRSF PIRSF035905 711 905 1.0E-13 T 13-10-2018 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein BEN78_02555 9c63759dbdb81c42fd7c73e65bde0889 907 PIRSF PIRSF035905 2 553 3.8E-58 T 13-10-2018 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein BEN78_02555 9c63759dbdb81c42fd7c73e65bde0889 907 Pfam PF10101 Predicted membrane protein (DUF2339) 155 499 8.1E-102 T 13-10-2018 IPR019286 Protein of unknown function DUF2339, transmembrane BEN78_02555 9c63759dbdb81c42fd7c73e65bde0889 907 Pfam PF10101 Predicted membrane protein (DUF2339) 487 895 1.3E-39 T 13-10-2018 IPR019286 Protein of unknown function DUF2339, transmembrane BEN78_07040 ce56b0c7e8e84d57362133526d10624d 326 SUPERFAMILY SSF53474 31 319 1.35E-65 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_07040 ce56b0c7e8e84d57362133526d10624d 326 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 87 103 - T 13-10-2018 IPR002168 Lipase, GDXG, putative histidine active site GO:0016787 Reactome: R-HSA-163560 BEN78_07040 ce56b0c7e8e84d57362133526d10624d 326 Pfam PF07859 alpha/beta hydrolase fold 87 295 1.5E-59 T 13-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 BEN78_07040 ce56b0c7e8e84d57362133526d10624d 326 Gene3D G3DSA:3.40.50.1820 21 321 6.2E-79 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_15175 d408e04aa86f55d133ef18ba5087bda9 574 Pfam PF00733 Asparagine synthase 214 569 4.0E-24 T 13-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 BEN78_15175 d408e04aa86f55d133ef18ba5087bda9 574 Gene3D G3DSA:3.60.20.10 72 194 2.3E-7 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BEN78_15175 d408e04aa86f55d133ef18ba5087bda9 574 SUPERFAMILY SSF52402 204 549 3.96E-29 T 13-10-2018 BEN78_15175 d408e04aa86f55d133ef18ba5087bda9 574 PIRSF PIRSF001589 84 574 2.7E-32 T 13-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 BEN78_15175 d408e04aa86f55d133ef18ba5087bda9 574 SUPERFAMILY SSF56235 87 195 7.72E-6 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BEN78_02825 ebf33f519a998d5a72a8fe9846498c9f 185 Gene3D G3DSA:3.40.630.30 16 182 7.1E-37 T 13-10-2018 BEN78_02825 ebf33f519a998d5a72a8fe9846498c9f 185 Pfam PF00583 Acetyltransferase (GNAT) family 51 159 2.5E-12 T 13-10-2018 IPR000182 GNAT domain BEN78_02825 ebf33f519a998d5a72a8fe9846498c9f 185 SUPERFAMILY SSF55729 15 169 1.65E-27 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN78_15325 25c96ec1ab554f80fc6ead2424bab1b5 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 3.2E-14 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN78_15325 25c96ec1ab554f80fc6ead2424bab1b5 206 SUPERFAMILY SSF46689 7 76 4.41E-18 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN78_15325 25c96ec1ab554f80fc6ead2424bab1b5 206 SUPERFAMILY SSF48498 82 206 9.34E-25 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BEN78_15325 25c96ec1ab554f80fc6ead2424bab1b5 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 4.9E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN78_15325 25c96ec1ab554f80fc6ead2424bab1b5 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 4.9E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN78_15325 25c96ec1ab554f80fc6ead2424bab1b5 206 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 56 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BEN78_15325 25c96ec1ab554f80fc6ead2424bab1b5 206 Gene3D G3DSA:1.10.357.10 4 206 2.0E-57 T 13-10-2018 BEN78_07135 06dae1732369210ec26e4e87982d6e50 276 Pfam PF00756 Putative esterase 21 268 4.8E-68 T 13-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 BEN78_07135 06dae1732369210ec26e4e87982d6e50 276 Gene3D G3DSA:3.40.50.1820 1 275 3.1E-98 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_07135 06dae1732369210ec26e4e87982d6e50 276 SUPERFAMILY SSF53474 3 274 1.58E-93 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_07135 06dae1732369210ec26e4e87982d6e50 276 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 4 274 1.3E-130 T 13-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 BEN78_14735 565ecaab4c4575b117b40de6fa4f98d1 377 Gene3D G3DSA:3.40.630.30 173 316 2.0E-6 T 13-10-2018 BEN78_14735 565ecaab4c4575b117b40de6fa4f98d1 377 SUPERFAMILY SSF55729 175 351 3.04E-37 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN78_14735 565ecaab4c4575b117b40de6fa4f98d1 377 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 10 372 1.3E-138 T 13-10-2018 IPR007434 Peptidogalycan biosysnthesis/recognition BEN78_04245 fc2084aadcb35dd410fc5a565e7627bb 242 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN78_04245 fc2084aadcb35dd410fc5a565e7627bb 242 Gene3D G3DSA:3.40.50.300 17 242 4.5E-68 T 13-10-2018 BEN78_04245 fc2084aadcb35dd410fc5a565e7627bb 242 Pfam PF00005 ABC transporter 38 184 3.1E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_04245 fc2084aadcb35dd410fc5a565e7627bb 242 SUPERFAMILY SSF52540 19 237 1.23E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_04245 fc2084aadcb35dd410fc5a565e7627bb 242 SMART SM00382 47 235 2.8E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_05560 7ca19382c7f5691ea8f48e59602bea29 261 TIGRFAM TIGR01401 fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT 6 251 7.2E-65 T 13-10-2018 IPR006304 Type III secretion protein SpaR/YscT GO:0016021 BEN78_05560 7ca19382c7f5691ea8f48e59602bea29 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 1.9E-32 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BEN78_05560 7ca19382c7f5691ea8f48e59602bea29 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 18 39 1.9E-32 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BEN78_05560 7ca19382c7f5691ea8f48e59602bea29 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 79 98 1.9E-32 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BEN78_05560 7ca19382c7f5691ea8f48e59602bea29 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 1.9E-32 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BEN78_05560 7ca19382c7f5691ea8f48e59602bea29 261 Pfam PF01311 Bacterial export proteins, family 1 10 243 4.6E-57 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BEN78_16385 28028a1b5686701a28ca337479f10105 530 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 41 495 2.6E-132 T 13-10-2018 IPR003846 Uncharacterised protein family UPF0061 BEN78_16385 28028a1b5686701a28ca337479f10105 530 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 13 512 43.926 T 13-10-2018 IPR003846 Uncharacterised protein family UPF0061 BEN78_11545 8ce9d6ca0f2f85be03eb068520130fae 795 Pfam PF09369 Domain of unknown function (DUF1998) 661 767 3.5E-12 T 13-10-2018 IPR018973 DEAD/DEAH-box helicase, putative BEN78_11545 8ce9d6ca0f2f85be03eb068520130fae 795 Gene3D G3DSA:3.40.50.300 43 248 1.0E-44 T 13-10-2018 BEN78_11545 8ce9d6ca0f2f85be03eb068520130fae 795 SMART SM00490 311 399 2.7E-16 T 13-10-2018 IPR001650 Helicase, C-terminal BEN78_11545 8ce9d6ca0f2f85be03eb068520130fae 795 SUPERFAMILY SSF52540 74 405 9.77E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_11545 8ce9d6ca0f2f85be03eb068520130fae 795 SMART SM00487 58 255 1.3E-30 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN78_11545 8ce9d6ca0f2f85be03eb068520130fae 795 Pfam PF00271 Helicase conserved C-terminal domain 295 398 6.8E-15 T 13-10-2018 IPR001650 Helicase, C-terminal BEN78_11545 8ce9d6ca0f2f85be03eb068520130fae 795 Gene3D G3DSA:3.40.50.300 280 434 5.4E-25 T 13-10-2018 BEN78_11545 8ce9d6ca0f2f85be03eb068520130fae 795 Pfam PF00270 DEAD/DEAH box helicase 64 232 1.7E-27 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BEN78_03345 1e4877eaa17fc14ca23be9011f0f2c9d 551 Pfam PF09913 Predicted membrane protein (DUF2142) 60 358 3.4E-34 T 13-10-2018 IPR018674 Protein of unknown function DUF2142, membrane BEN78_15590 f1f79e35e8e471f0bfe1901080251e1c 129 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 81 94 - T 13-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BEN78_15590 f1f79e35e8e471f0bfe1901080251e1c 129 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 5 123 2.8E-38 T 13-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BEN78_15590 f1f79e35e8e471f0bfe1901080251e1c 129 PIRSF PIRSF000178 1 125 3.5E-40 T 13-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BEN78_15590 f1f79e35e8e471f0bfe1901080251e1c 129 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 3 119 1.4E-33 T 13-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BEN78_15590 f1f79e35e8e471f0bfe1901080251e1c 129 Gene3D G3DSA:1.20.1300.10 1 123 1.6E-37 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BEN78_15590 f1f79e35e8e471f0bfe1901080251e1c 129 SUPERFAMILY SSF81343 4 123 4.14E-36 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BEN78_15590 f1f79e35e8e471f0bfe1901080251e1c 129 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 6 30 - T 13-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BEN78_14025 d273adbe04a5c17315b94d621778368e 592 SUPERFAMILY SSF52540 343 590 2.4E-91 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_14025 d273adbe04a5c17315b94d621778368e 592 SMART SM00382 379 565 4.3E-21 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_14025 d273adbe04a5c17315b94d621778368e 592 Pfam PF00664 ABC transporter transmembrane region 38 299 6.2E-49 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BEN78_14025 d273adbe04a5c17315b94d621778368e 592 SUPERFAMILY SSF90123 23 333 3.4E-74 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BEN78_14025 d273adbe04a5c17315b94d621778368e 592 Pfam PF00005 ABC transporter 370 519 2.0E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_14025 d273adbe04a5c17315b94d621778368e 592 Gene3D G3DSA:3.40.50.300 345 591 8.6E-95 T 13-10-2018 BEN78_14025 d273adbe04a5c17315b94d621778368e 592 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 18 590 3.0E-262 T 13-10-2018 IPR011918 ABC transporter, ATP-binding/permease protein BEN78_14025 d273adbe04a5c17315b94d621778368e 592 ProSitePatterns PS00211 ABC transporters family signature. 491 505 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN78_14025 d273adbe04a5c17315b94d621778368e 592 Gene3D G3DSA:1.20.1560.10 18 339 1.0E-80 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BEN78_07725 6c8b3d0544419a919bfc9b98d39fb975 403 SUPERFAMILY SSF50182 181 246 1.73E-13 T 13-10-2018 IPR010920 LSM domain superfamily BEN78_07725 6c8b3d0544419a919bfc9b98d39fb975 403 Pfam PF00924 Mechanosensitive ion channel 141 333 2.8E-24 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 BEN78_01050 5eb2c4e46c4e1271af806bfa3147aae1 119 Pfam PF09685 Domain of unknown function (DUF4870) 16 118 2.6E-31 T 13-10-2018 IPR019109 Protein of unknown function DUF4870 BEN78_13015 16342dcc67d46f1088454cace857280d 267 Gene3D G3DSA:3.90.550.10 3 254 2.2E-82 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_13015 16342dcc67d46f1088454cace857280d 267 Pfam PF02348 Cytidylyltransferase 8 223 5.1E-46 T 13-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 BEN78_13015 16342dcc67d46f1088454cace857280d 267 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 5 253 38.399 T 13-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 BEN78_13015 16342dcc67d46f1088454cace857280d 267 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 7 245 9.2E-76 T 13-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 BEN78_13015 16342dcc67d46f1088454cace857280d 267 SUPERFAMILY SSF53448 7 252 3.75E-58 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_10895 2ccc8eeaf551fb3cc4c35a0a7d577f39 238 Pfam PF11306 Protein of unknown function (DUF3108) 21 236 1.3E-11 T 13-10-2018 IPR021457 Protein of unknown function DUF3108 BEN78_02005 df786c7947632f50373cdfb4abdbf33b 219 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 72 8.7E-12 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN78_02005 df786c7947632f50373cdfb4abdbf33b 219 SUPERFAMILY SSF48498 98 215 2.15E-11 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BEN78_02005 df786c7947632f50373cdfb4abdbf33b 219 Gene3D G3DSA:1.10.357.10 18 219 1.1E-48 T 13-10-2018 BEN78_02005 df786c7947632f50373cdfb4abdbf33b 219 SUPERFAMILY SSF46689 16 93 3.23E-14 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN78_09695 ddeaa8252700990927a5ca4716335621 233 PRINTS PR00783 Major intrinsic protein family signature 44 68 2.0E-50 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BEN78_09695 ddeaa8252700990927a5ca4716335621 233 PRINTS PR00783 Major intrinsic protein family signature 167 189 2.0E-50 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BEN78_09695 ddeaa8252700990927a5ca4716335621 233 PRINTS PR00783 Major intrinsic protein family signature 81 100 2.0E-50 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BEN78_09695 ddeaa8252700990927a5ca4716335621 233 PRINTS PR00783 Major intrinsic protein family signature 4 23 2.0E-50 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BEN78_09695 ddeaa8252700990927a5ca4716335621 233 PRINTS PR00783 Major intrinsic protein family signature 137 155 2.0E-50 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BEN78_09695 ddeaa8252700990927a5ca4716335621 233 PRINTS PR00783 Major intrinsic protein family signature 206 226 2.0E-50 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BEN78_09695 ddeaa8252700990927a5ca4716335621 233 Pfam PF00230 Major intrinsic protein 3 223 3.2E-46 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BEN78_09695 ddeaa8252700990927a5ca4716335621 233 TIGRFAM TIGR00861 MIP: MIP family channel proteins 8 222 9.2E-53 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BEN78_09695 ddeaa8252700990927a5ca4716335621 233 Gene3D G3DSA:1.20.1080.10 2 230 1.4E-74 T 13-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 BEN78_09695 ddeaa8252700990927a5ca4716335621 233 ProSitePatterns PS00221 MIP family signature. 62 70 - T 13-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 BEN78_09695 ddeaa8252700990927a5ca4716335621 233 SUPERFAMILY SSF81338 3 229 1.57E-59 T 13-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 BEN78_03210 6fd3946b7b0fcb5507e32de3042a3cfa 162 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 24 155 9.1E-39 T 13-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 BEN78_03210 6fd3946b7b0fcb5507e32de3042a3cfa 162 Gene3D G3DSA:3.40.630.30 15 160 1.8E-45 T 13-10-2018 BEN78_03210 6fd3946b7b0fcb5507e32de3042a3cfa 162 SUPERFAMILY SSF55729 16 159 3.09E-35 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN78_03210 6fd3946b7b0fcb5507e32de3042a3cfa 162 Pfam PF00583 Acetyltransferase (GNAT) family 32 133 1.2E-14 T 13-10-2018 IPR000182 GNAT domain BEN78_03155 fbabe1fe0e9c3d6ff9e7a826d52e9a56 1269 Gene3D G3DSA:2.60.120.200 21 242 3.5E-15 T 13-10-2018 BEN78_03155 fbabe1fe0e9c3d6ff9e7a826d52e9a56 1269 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 78 240 8.6E-10 T 13-10-2018 BEN78_03155 fbabe1fe0e9c3d6ff9e7a826d52e9a56 1269 SUPERFAMILY SSF49899 22 242 1.11E-16 T 13-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily BEN78_07505 af7f9d7ffa86a287c318014e2c822e11 197 SUPERFAMILY SSF46689 10 81 1.05E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN78_07505 af7f9d7ffa86a287c318014e2c822e11 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 30 63 5.8E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN78_07505 af7f9d7ffa86a287c318014e2c822e11 197 Gene3D G3DSA:1.10.10.60 9 58 9.7E-17 T 13-10-2018 BEN78_07505 af7f9d7ffa86a287c318014e2c822e11 197 Gene3D G3DSA:1.10.357.10 60 193 2.9E-24 T 13-10-2018 BEN78_13810 16e5449f4c3ad23de0c529f54d953521 192 SUPERFAMILY SSF48498 109 180 5.78E-5 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BEN78_13810 16e5449f4c3ad23de0c529f54d953521 192 Gene3D G3DSA:1.10.357.10 6 189 7.3E-45 T 13-10-2018 BEN78_13810 16e5449f4c3ad23de0c529f54d953521 192 SUPERFAMILY SSF46689 3 79 5.03E-19 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN78_13810 16e5449f4c3ad23de0c529f54d953521 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 5.1E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN78_13810 16e5449f4c3ad23de0c529f54d953521 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 5.1E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN78_13810 16e5449f4c3ad23de0c529f54d953521 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 2.5E-14 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN78_15825 7b5bf8fba3013a83a6e6ae3cb7b620d2 127 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 20 116 2.0E-33 T 13-10-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 BEN78_15825 7b5bf8fba3013a83a6e6ae3cb7b620d2 127 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 27 99 7.2E-17 T 13-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 BEN78_15760 63947fb6595bd7f396d67b464329a70c 205 Pfam PF01694 Rhomboid family 40 187 1.7E-27 T 13-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 BEN78_15760 63947fb6595bd7f396d67b464329a70c 205 SUPERFAMILY SSF144091 3 189 1.44E-35 T 13-10-2018 BEN78_15760 63947fb6595bd7f396d67b464329a70c 205 Gene3D G3DSA:1.20.1540.10 2 192 7.2E-27 T 13-10-2018 IPR035952 Rhomboid-like superfamily BEN78_16080 473fa58661f6820bee33b01593389cf8 73 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 47 5.1E-15 T 13-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type BEN78_16080 473fa58661f6820bee33b01593389cf8 73 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 3 45 4.5E-19 T 13-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type BEN78_07685 23675768d62a34418086fdb99752e106 203 Gene3D G3DSA:3.40.50.360 9 199 4.2E-15 T 13-10-2018 IPR029039 Flavoprotein-like superfamily BEN78_07685 23675768d62a34418086fdb99752e106 203 SUPERFAMILY SSF52218 9 195 2.72E-23 T 13-10-2018 IPR029039 Flavoprotein-like superfamily BEN78_07685 23675768d62a34418086fdb99752e106 203 Pfam PF03358 NADPH-dependent FMN reductase 17 157 2.9E-17 T 13-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 BEN78_09910 ce6b07cc9471f5715138563075deec8e 312 Gene3D G3DSA:3.90.245.10 6 312 1.2E-89 T 13-10-2018 IPR036452 Ribonucleoside hydrolase-like BEN78_09910 ce6b07cc9471f5715138563075deec8e 312 SUPERFAMILY SSF53590 5 310 4.19E-83 T 13-10-2018 IPR036452 Ribonucleoside hydrolase-like BEN78_09910 ce6b07cc9471f5715138563075deec8e 312 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 6 302 1.3E-76 T 13-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain BEN78_08965 41541b289260e7ddf211813b7884bd60 194 Gene3D G3DSA:3.90.550.10 1 188 1.3E-34 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_08965 41541b289260e7ddf211813b7884bd60 194 Pfam PF12804 MobA-like NTP transferase domain 1 158 6.4E-26 T 13-10-2018 IPR025877 MobA-like NTP transferase BEN78_08965 41541b289260e7ddf211813b7884bd60 194 SUPERFAMILY SSF53448 1 160 2.25E-19 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_00800 787d3e2efa8425007b65ce78f75f4c6c 206 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 63 85 - T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 BEN78_00800 787d3e2efa8425007b65ce78f75f4c6c 206 Gene3D G3DSA:1.20.120.1760 14 166 2.2E-13 T 13-10-2018 BEN78_00800 787d3e2efa8425007b65ce78f75f4c6c 206 Pfam PF01066 CDP-alcohol phosphatidyltransferase 15 85 7.6E-12 T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 BEN78_01995 4078ec323c6ffbb7e42dda77a4d70901 317 SUPERFAMILY SSF52540 11 230 4.99E-65 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_01995 4078ec323c6ffbb7e42dda77a4d70901 317 Gene3D G3DSA:3.40.50.300 3 242 4.8E-69 T 13-10-2018 BEN78_01995 4078ec323c6ffbb7e42dda77a4d70901 317 Pfam PF00005 ABC transporter 27 170 1.9E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_01995 4078ec323c6ffbb7e42dda77a4d70901 317 SMART SM00382 35 216 2.0E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_01995 4078ec323c6ffbb7e42dda77a4d70901 317 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN78_02975 66844cb0696af70d7543e635da530fcc 169 Pfam PF03703 Bacterial PH domain 77 155 3.9E-15 T 13-10-2018 IPR005182 Domain of unknown function DUF304 BEN78_09740 f18294e9f1dd6c002bb3ab63c28efb2e 92 Pfam PF07362 Post-segregation antitoxin CcdA 12 82 3.0E-27 T 13-10-2018 IPR009956 Post-segregation antitoxin CcdA BEN78_03025 657d0069c324fc07d51a0e716bc7d139 171 Hamap MF_00163 Peptide deformylase [def]. 2 166 29.436 T 13-10-2018 IPR023635 Peptide deformylase BEN78_03025 657d0069c324fc07d51a0e716bc7d139 171 PIRSF PIRSF004749 1 171 1.4E-52 T 13-10-2018 IPR023635 Peptide deformylase BEN78_03025 657d0069c324fc07d51a0e716bc7d139 171 Gene3D G3DSA:3.90.45.10 1 170 8.9E-57 T 13-10-2018 IPR036821 Peptide deformylase superfamily BEN78_03025 657d0069c324fc07d51a0e716bc7d139 171 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 6 164 4.8E-48 T 13-10-2018 IPR023635 Peptide deformylase BEN78_03025 657d0069c324fc07d51a0e716bc7d139 171 PRINTS PR01576 Peptide deformylase signature 93 104 1.6E-36 T 13-10-2018 IPR023635 Peptide deformylase BEN78_03025 657d0069c324fc07d51a0e716bc7d139 171 PRINTS PR01576 Peptide deformylase signature 36 65 1.6E-36 T 13-10-2018 IPR023635 Peptide deformylase BEN78_03025 657d0069c324fc07d51a0e716bc7d139 171 PRINTS PR01576 Peptide deformylase signature 105 123 1.6E-36 T 13-10-2018 IPR023635 Peptide deformylase BEN78_03025 657d0069c324fc07d51a0e716bc7d139 171 PRINTS PR01576 Peptide deformylase signature 124 153 1.6E-36 T 13-10-2018 IPR023635 Peptide deformylase BEN78_03025 657d0069c324fc07d51a0e716bc7d139 171 Pfam PF01327 Polypeptide deformylase 5 156 2.5E-46 T 13-10-2018 IPR023635 Peptide deformylase BEN78_03025 657d0069c324fc07d51a0e716bc7d139 171 SUPERFAMILY SSF56420 2 168 7.07E-58 T 13-10-2018 IPR036821 Peptide deformylase superfamily BEN78_11885 a47c8ea8cab9a069e37d2e5ac6a4819e 149 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 149 1.3E-38 T 13-10-2018 IPR005265 Uncharacterised protein family UPF0093 BEN78_11885 a47c8ea8cab9a069e37d2e5ac6a4819e 149 PIRSF PIRSF004638 1 149 2.9E-39 T 13-10-2018 IPR005265 Uncharacterised protein family UPF0093 BEN78_08585 8ed3e9815b51d77bb373c839095677b6 683 PIRSF PIRSF001265 1 683 5.7E-258 T 13-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BEN78_08585 8ed3e9815b51d77bb373c839095677b6 683 TIGRFAM TIGR01104 V_PPase: V-type H(+)-translocating pyrophosphatase 9 683 3.0E-265 T 13-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BEN78_08585 8ed3e9815b51d77bb373c839095677b6 683 Pfam PF03030 Inorganic H+ pyrophosphatase 16 678 3.5E-266 T 13-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BEN78_08585 8ed3e9815b51d77bb373c839095677b6 683 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 4 683 25.392 T 13-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BEN78_06395 4a56bab3c3b862be1bc40ef838c3d422 141 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 138 1.5E-28 T 13-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 BEN78_06395 4a56bab3c3b862be1bc40ef838c3d422 141 Gene3D G3DSA:3.30.420.270 65 134 5.7E-13 T 13-10-2018 BEN78_09950 41cd4195df8197b89a75bc4afeb69962 173 Gene3D G3DSA:2.30.30.830 78 171 8.4E-30 T 13-10-2018 BEN78_09950 41cd4195df8197b89a75bc4afeb69962 173 Pfam PF04351 Pilus assembly protein, PilP 31 170 1.5E-46 T 13-10-2018 IPR007446 Pilus assembly protein PilP BEN78_09950 41cd4195df8197b89a75bc4afeb69962 173 PIRSF PIRSF016481 1 173 9.6E-55 T 13-10-2018 IPR007446 Pilus assembly protein PilP BEN78_00150 a36cf74258d7268421315ade484cd19f 182 Pfam PF07152 YaeQ protein 1 173 3.7E-72 T 13-10-2018 IPR009822 YaeQ BEN78_00150 a36cf74258d7268421315ade484cd19f 182 Gene3D G3DSA:3.10.640.10 1 182 1.6E-76 T 13-10-2018 IPR038590 YaeQ superfamily BEN78_00150 a36cf74258d7268421315ade484cd19f 182 PIRSF PIRSF011484 1 179 5.3E-65 T 13-10-2018 IPR009822 YaeQ BEN78_00150 a36cf74258d7268421315ade484cd19f 182 SUPERFAMILY SSF52980 4 178 2.95E-68 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 BEN78_00150 a36cf74258d7268421315ade484cd19f 182 SMART SM01322 1 176 3.6E-106 T 13-10-2018 IPR009822 YaeQ BEN78_02705 3fed6ed24fbb1da388031ad44b35e35f 170 Pfam PF00691 OmpA family 66 161 5.4E-18 T 13-10-2018 IPR006665 OmpA-like domain BEN78_02705 3fed6ed24fbb1da388031ad44b35e35f 170 SUPERFAMILY SSF103088 49 166 7.98E-32 T 13-10-2018 IPR036737 OmpA-like domain superfamily BEN78_02705 3fed6ed24fbb1da388031ad44b35e35f 170 PRINTS PR01021 OMPA domain signature 112 128 2.9E-13 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BEN78_02705 3fed6ed24fbb1da388031ad44b35e35f 170 PRINTS PR01021 OMPA domain signature 67 89 2.9E-13 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BEN78_02705 3fed6ed24fbb1da388031ad44b35e35f 170 PRINTS PR01021 OMPA domain signature 97 112 2.9E-13 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BEN78_02705 3fed6ed24fbb1da388031ad44b35e35f 170 Gene3D G3DSA:3.30.1330.60 52 169 4.0E-34 T 13-10-2018 IPR036737 OmpA-like domain superfamily BEN78_02705 3fed6ed24fbb1da388031ad44b35e35f 170 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 2 167 28.26 T 13-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 BEN78_02705 3fed6ed24fbb1da388031ad44b35e35f 170 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 65 167 4.7E-41 T 13-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 BEN78_16055 d4d41f1a3fde4f32918db9086994d667 352 Pfam PF01263 Aldose 1-epimerase 89 345 2.4E-34 T 13-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 BEN78_16055 d4d41f1a3fde4f32918db9086994d667 352 SUPERFAMILY SSF74650 71 346 5.65E-56 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 BEN78_16055 d4d41f1a3fde4f32918db9086994d667 352 Gene3D G3DSA:2.70.98.10 80 349 3.3E-63 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 BEN78_16055 d4d41f1a3fde4f32918db9086994d667 352 PIRSF PIRSF016020 74 350 5.3E-37 T 13-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 BEN78_01900 4282a0c0416e62b2c59a0cd4ce845ed8 271 Pfam PF00756 Putative esterase 3 182 4.5E-9 T 13-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 BEN78_01900 4282a0c0416e62b2c59a0cd4ce845ed8 271 Gene3D G3DSA:3.40.50.1820 1 263 2.2E-62 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_01900 4282a0c0416e62b2c59a0cd4ce845ed8 271 SUPERFAMILY SSF53474 1 249 1.35E-48 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_08775 74551b0b4543f1c21be44412a1f0418e 223 Gene3D G3DSA:3.30.450.40 43 222 6.1E-43 T 13-10-2018 IPR029016 GAF-like domain superfamily BEN78_08775 74551b0b4543f1c21be44412a1f0418e 223 Pfam PF04340 Protein of unknown function, DUF484 3 222 5.3E-62 T 13-10-2018 IPR007435 Protein of unknown function DUF484 BEN78_03290 2e604a7bf6e7997845c8661b5c9a3329 300 SUPERFAMILY SSF51735 1 296 3.06E-97 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN78_03290 2e604a7bf6e7997845c8661b5c9a3329 300 Gene3D G3DSA:3.90.25.10 168 289 3.8E-107 T 13-10-2018 BEN78_03290 2e604a7bf6e7997845c8661b5c9a3329 300 Pfam PF04321 RmlD substrate binding domain 1 296 1.3E-107 T 13-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 BEN78_03290 2e604a7bf6e7997845c8661b5c9a3329 300 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 4 294 6.3E-110 T 13-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 BEN78_03290 2e604a7bf6e7997845c8661b5c9a3329 300 Gene3D G3DSA:3.40.50.720 4 283 3.8E-107 T 13-10-2018 BEN78_16750 9cba57e43d965ba65c0af7bad7d0abd8 455 Pfam PF09190 DALR domain 341 398 2.5E-10 T 13-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 BEN78_16750 9cba57e43d965ba65c0af7bad7d0abd8 455 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 3 454 2.1E-143 T 13-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 BEN78_16750 9cba57e43d965ba65c0af7bad7d0abd8 455 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 23 313 2.2E-109 T 13-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 BEN78_16750 9cba57e43d965ba65c0af7bad7d0abd8 455 Gene3D G3DSA:3.40.50.620 1 306 2.3E-117 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_16750 9cba57e43d965ba65c0af7bad7d0abd8 455 SMART SM00840 339 398 9.3E-10 T 13-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 BEN78_16750 9cba57e43d965ba65c0af7bad7d0abd8 455 Gene3D G3DSA:1.20.120.640 308 454 7.5E-33 T 13-10-2018 BEN78_16750 9cba57e43d965ba65c0af7bad7d0abd8 455 SUPERFAMILY SSF52374 4 314 4.29E-85 T 13-10-2018 BEN78_16750 9cba57e43d965ba65c0af7bad7d0abd8 455 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 3 455 35.94 T 13-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 BEN78_16750 9cba57e43d965ba65c0af7bad7d0abd8 455 SUPERFAMILY SSF47323 317 454 2.35E-28 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN78_16750 9cba57e43d965ba65c0af7bad7d0abd8 455 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 5.8E-29 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 BEN78_16750 9cba57e43d965ba65c0af7bad7d0abd8 455 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 62 71 5.8E-29 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 BEN78_16750 9cba57e43d965ba65c0af7bad7d0abd8 455 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 26 37 5.8E-29 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 BEN78_16750 9cba57e43d965ba65c0af7bad7d0abd8 455 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 5.8E-29 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 BEN78_05525 0877dae98af73dd6b37f35b588311a5c 100 Pfam PF04347 Flagellar biosynthesis protein, FliO 21 88 2.6E-10 T 13-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 BEN78_12255 0ae3d0975ade76a9410ab513ca0e2e52 231 TIGRFAM TIGR01298 RNaseT: ribonuclease T 18 214 1.6E-96 T 13-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 BEN78_12255 0ae3d0975ade76a9410ab513ca0e2e52 231 Gene3D G3DSA:3.30.420.10 18 218 1.1E-52 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BEN78_12255 0ae3d0975ade76a9410ab513ca0e2e52 231 Pfam PF00929 Exonuclease 28 202 2.2E-25 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BEN78_12255 0ae3d0975ade76a9410ab513ca0e2e52 231 SMART SM00479 26 211 3.1E-28 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BEN78_12255 0ae3d0975ade76a9410ab513ca0e2e52 231 SUPERFAMILY SSF53098 17 211 3.69E-53 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily BEN78_12255 0ae3d0975ade76a9410ab513ca0e2e52 231 Hamap MF_00157 Ribonuclease T [rnt]. 1 231 87.787 T 13-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 BEN78_07270 e5fecba813758f22c37f57a872becf7d 316 Pfam PF00248 Aldo/keto reductase family 15 313 3.7E-65 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain BEN78_07270 e5fecba813758f22c37f57a872becf7d 316 PRINTS PR00069 Aldo-keto reductase signature 139 156 8.5E-5 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BEN78_07270 e5fecba813758f22c37f57a872becf7d 316 PRINTS PR00069 Aldo-keto reductase signature 108 126 8.5E-5 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BEN78_07270 e5fecba813758f22c37f57a872becf7d 316 SUPERFAMILY SSF51430 1 314 1.96E-93 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BEN78_07270 e5fecba813758f22c37f57a872becf7d 316 Gene3D G3DSA:3.20.20.100 1 315 2.7E-104 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BEN78_12330 41c90c3b2903a29e59b580bf6b60f630 251 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 230 6.4E-39 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 BEN78_12330 41c90c3b2903a29e59b580bf6b60f630 251 SUPERFAMILY SSF52096 9 248 9.11E-53 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BEN78_12330 41c90c3b2903a29e59b580bf6b60f630 251 Gene3D G3DSA:3.90.226.10 1 226 1.3E-62 T 13-10-2018 BEN78_09680 2ab3601b0b24bdeff926b0eb7919f818 394 Pfam PF00563 EAL domain 142 341 1.2E-14 T 13-10-2018 IPR001633 EAL domain BEN78_09680 2ab3601b0b24bdeff926b0eb7919f818 394 SUPERFAMILY SSF141868 190 310 1.44E-13 T 13-10-2018 IPR035919 EAL domain superfamily BEN78_09680 2ab3601b0b24bdeff926b0eb7919f818 394 Gene3D G3DSA:3.20.20.450 134 360 8.2E-17 T 13-10-2018 IPR035919 EAL domain superfamily BEN78_03055 5f7e3cb4a6194af7c48f4393efd0a9b1 189 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 6 188 37.033 T 13-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 BEN78_03055 5f7e3cb4a6194af7c48f4393efd0a9b1 189 Gene3D G3DSA:3.90.870.10 2 188 1.4E-55 T 13-10-2018 BEN78_03055 5f7e3cb4a6194af7c48f4393efd0a9b1 189 Pfam PF01300 Telomere recombination 15 187 3.4E-41 T 13-10-2018 IPR006070 YrdC-like domain GO:0003725 BEN78_03055 5f7e3cb4a6194af7c48f4393efd0a9b1 189 SUPERFAMILY SSF55821 9 187 3.66E-50 T 13-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily BEN78_05070 94489604a8ae3ddc2b0aef8189cdfdd8 58 Pfam PF05532 CsbD-like 5 56 7.0E-16 T 13-10-2018 IPR008462 CsbD-like domain BEN78_05070 94489604a8ae3ddc2b0aef8189cdfdd8 58 SUPERFAMILY SSF69047 2 56 1.96E-12 T 13-10-2018 IPR036629 YjbJ superfamily BEN78_05070 94489604a8ae3ddc2b0aef8189cdfdd8 58 Gene3D G3DSA:1.10.1470.10 1 57 3.4E-10 T 13-10-2018 IPR036629 YjbJ superfamily BEN78_16165 3d26a5dbbeb1a28ddd5a348658e8b091 276 SUPERFAMILY SSF109709 143 204 9.29E-5 T 13-10-2018 BEN78_12260 c5a6115a5cec868030c9631486264dfd 234 PIRSF PIRSF003107 6 221 1.4E-56 T 13-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 BEN78_12260 c5a6115a5cec868030c9631486264dfd 234 SUPERFAMILY SSF109755 11 219 5.02E-63 T 13-10-2018 BEN78_12260 c5a6115a5cec868030c9631486264dfd 234 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 11 218 5.3E-61 T 13-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 BEN78_12260 c5a6115a5cec868030c9631486264dfd 234 Gene3D G3DSA:1.20.58.220 2 117 1.9E-30 T 13-10-2018 IPR038078 PhoU-like domain superfamily BEN78_12260 c5a6115a5cec868030c9631486264dfd 234 Pfam PF01895 PhoU domain 129 210 3.9E-17 T 13-10-2018 IPR026022 PhoU domain BEN78_12260 c5a6115a5cec868030c9631486264dfd 234 Pfam PF01895 PhoU domain 24 110 7.9E-20 T 13-10-2018 IPR026022 PhoU domain BEN78_12260 c5a6115a5cec868030c9631486264dfd 234 Gene3D G3DSA:1.20.58.220 118 226 1.0E-30 T 13-10-2018 IPR038078 PhoU-like domain superfamily BEN78_14880 c04e4a48f6c6039e7bfd4b5bfd8a0cee 187 Pfam PF00929 Exonuclease 12 173 1.5E-26 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BEN78_14880 c04e4a48f6c6039e7bfd4b5bfd8a0cee 187 Hamap MF_00045 Oligoribonuclease [orn]. 6 184 40.777 T 13-10-2018 IPR022894 Oligoribonuclease GO:0000175 BEN78_14880 c04e4a48f6c6039e7bfd4b5bfd8a0cee 187 Gene3D G3DSA:3.30.420.10 1 186 7.4E-70 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BEN78_14880 c04e4a48f6c6039e7bfd4b5bfd8a0cee 187 SUPERFAMILY SSF53098 7 182 8.6E-46 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily BEN78_14880 c04e4a48f6c6039e7bfd4b5bfd8a0cee 187 SMART SM00479 10 183 5.0E-14 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BEN78_07565 b9accc986d3f6ebaaef93028bcd0426d 205 SUPERFAMILY SSF49777 1 196 6.02E-43 T 13-10-2018 IPR036610 PEBP-like superfamily BEN78_07565 b9accc986d3f6ebaaef93028bcd0426d 205 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 74 192 6.1E-17 T 13-10-2018 IPR005247 YbhB/YbcL BEN78_07565 b9accc986d3f6ebaaef93028bcd0426d 205 Pfam PF01161 Phosphatidylethanolamine-binding protein 17 196 2.9E-36 T 13-10-2018 IPR008914 Phosphatidylethanolamine-binding protein BEN78_07565 b9accc986d3f6ebaaef93028bcd0426d 205 Gene3D G3DSA:3.90.280.10 1 197 4.2E-49 T 13-10-2018 IPR036610 PEBP-like superfamily BEN78_10690 63be9582d27c7ca05cc34040017353b3 366 Pfam PF05816 Toxic anion resistance protein (TelA) 48 360 2.0E-72 T 13-10-2018 IPR008863 Toxic anion resistance BEN78_10690 63be9582d27c7ca05cc34040017353b3 366 PIRSF PIRSF026508 1 364 4.0E-94 T 13-10-2018 IPR008863 Toxic anion resistance BEN78_02165 075e36c14bd2a4ea88360b30b27e17d3 212 SUPERFAMILY SSF158682 60 208 2.88E-23 T 13-10-2018 IPR029024 TerB-like BEN78_02165 075e36c14bd2a4ea88360b30b27e17d3 212 Pfam PF04391 Protein of unknown function (DUF533) 28 206 4.3E-56 T 13-10-2018 IPR007486 Inner membrane protein YebE BEN78_02165 075e36c14bd2a4ea88360b30b27e17d3 212 Gene3D G3DSA:1.10.3680.10 89 211 5.2E-9 T 13-10-2018 IPR029024 TerB-like BEN78_06110 438da891d60682b64338680fd3ae5944 460 Gene3D G3DSA:3.40.710.10 150 450 1.1E-57 T 13-10-2018 BEN78_06110 438da891d60682b64338680fd3ae5944 460 Pfam PF00144 Beta-lactamase 170 435 8.2E-24 T 13-10-2018 IPR001466 Beta-lactamase-related BEN78_06110 438da891d60682b64338680fd3ae5944 460 SUPERFAMILY SSF56601 143 459 2.47E-61 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BEN78_11955 4da8c059a97064bfdd58b0a5a78ce9cd 156 SUPERFAMILY SSF54637 3 144 2.71E-25 T 13-10-2018 IPR029069 HotDog domain superfamily BEN78_11955 4da8c059a97064bfdd58b0a5a78ce9cd 156 Pfam PF14539 Domain of unknown function (DUF4442) 6 143 1.2E-24 T 13-10-2018 IPR027961 Protein of unknown function DUF4442 BEN78_11955 4da8c059a97064bfdd58b0a5a78ce9cd 156 Gene3D G3DSA:3.10.129.10 4 151 7.1E-34 T 13-10-2018 BEN78_00435 1774a2d70f5fe6bad1b9b227544bef92 180 Pfam PF01569 PAP2 superfamily 67 174 1.8E-17 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BEN78_00435 1774a2d70f5fe6bad1b9b227544bef92 180 SUPERFAMILY SSF48317 5 177 1.7E-32 T 13-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily BEN78_00435 1774a2d70f5fe6bad1b9b227544bef92 180 Gene3D G3DSA:1.20.144.10 54 172 1.6E-15 T 13-10-2018 BEN78_00435 1774a2d70f5fe6bad1b9b227544bef92 180 SMART SM00014 63 172 1.2E-11 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BEN78_10085 604e3b002ef0ff709caf005ad34d08f3 673 Gene3D G3DSA:1.10.287.950 345 672 1.4E-66 T 13-10-2018 BEN78_10085 604e3b002ef0ff709caf005ad34d08f3 673 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 453 638 4.7E-42 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BEN78_10085 604e3b002ef0ff709caf005ad34d08f3 673 SMART SM00283 409 670 1.0E-86 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BEN78_10085 604e3b002ef0ff709caf005ad34d08f3 673 SUPERFAMILY SSF58104 371 671 1.96E-67 T 13-10-2018 BEN78_13855 01c2146558177f3341bfd87d8375e6b9 301 TIGRFAM TIGR00436 era: GTP-binding protein Era 12 282 2.0E-80 T 13-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_13855 01c2146558177f3341bfd87d8375e6b9 301 SUPERFAMILY SSF54814 185 299 5.23E-38 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 BEN78_13855 01c2146558177f3341bfd87d8375e6b9 301 Hamap MF_00367 GTPase Era [era]. 9 299 34.629 T 13-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_13855 01c2146558177f3341bfd87d8375e6b9 301 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 172 7.5E-27 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BEN78_13855 01c2146558177f3341bfd87d8375e6b9 301 Gene3D G3DSA:3.30.300.20 189 300 4.9E-38 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta BEN78_13855 01c2146558177f3341bfd87d8375e6b9 301 SUPERFAMILY SSF52540 14 208 2.32E-41 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_13855 01c2146558177f3341bfd87d8375e6b9 301 Pfam PF07650 KH domain 212 287 4.4E-18 T 13-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN78_13855 01c2146558177f3341bfd87d8375e6b9 301 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 63 78 6.4E-7 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 BEN78_13855 01c2146558177f3341bfd87d8375e6b9 301 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 14 34 6.4E-7 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 BEN78_13855 01c2146558177f3341bfd87d8375e6b9 301 Gene3D G3DSA:3.40.50.300 8 187 5.3E-46 T 13-10-2018 BEN78_13855 01c2146558177f3341bfd87d8375e6b9 301 Pfam PF01926 50S ribosome-binding GTPase 14 128 6.6E-23 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 BEN78_10105 c83bd834e15b78be6db0cf2f73013345 157 SMART SM00260 7 149 1.6E-5 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BEN78_10105 c83bd834e15b78be6db0cf2f73013345 157 Pfam PF01584 CheW-like domain 12 148 1.2E-14 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BEN78_10105 c83bd834e15b78be6db0cf2f73013345 157 SUPERFAMILY SSF50341 9 149 4.32E-12 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 BEN78_16130 4c518f8454f1f98d171f3f1b104ef18d 222 SUPERFAMILY SSF46689 14 88 2.49E-15 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN78_16130 4c518f8454f1f98d171f3f1b104ef18d 222 Gene3D G3DSA:1.10.357.10 21 209 1.6E-32 T 13-10-2018 BEN78_16130 4c518f8454f1f98d171f3f1b104ef18d 222 Pfam PF00440 Bacterial regulatory proteins, tetR family 29 71 5.6E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN78_00715 d2c34b8ec799d5c4ad2035812861240c 252 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 48 228 1.6E-71 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BEN78_00715 d2c34b8ec799d5c4ad2035812861240c 252 Pfam PF01578 Cytochrome C assembly protein 33 186 6.3E-31 T 13-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 BEN78_00715 d2c34b8ec799d5c4ad2035812861240c 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 48 65 2.5E-48 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BEN78_00715 d2c34b8ec799d5c4ad2035812861240c 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 124 144 2.5E-48 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BEN78_00715 d2c34b8ec799d5c4ad2035812861240c 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 65 85 2.5E-48 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BEN78_00715 d2c34b8ec799d5c4ad2035812861240c 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 159 185 2.5E-48 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BEN78_00715 d2c34b8ec799d5c4ad2035812861240c 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 207 231 2.5E-48 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BEN78_00715 d2c34b8ec799d5c4ad2035812861240c 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 103 123 2.5E-48 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BEN78_12700 e09ce18a0b054f139c31ff8b2be06a7d 268 SUPERFAMILY SSF51366 1 246 9.42E-85 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BEN78_12700 e09ce18a0b054f139c31ff8b2be06a7d 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 248 1.7E-73 T 13-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BEN78_12700 e09ce18a0b054f139c31ff8b2be06a7d 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 264 34.737 T 13-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BEN78_12700 e09ce18a0b054f139c31ff8b2be06a7d 268 Gene3D G3DSA:3.20.20.70 1 268 6.4E-98 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_12700 e09ce18a0b054f139c31ff8b2be06a7d 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 13-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BEN78_12700 e09ce18a0b054f139c31ff8b2be06a7d 268 Pfam PF00290 Tryptophan synthase alpha chain 8 249 1.7E-84 T 13-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BEN78_07750 61e8533b40979a7eb069989b62fb879f 179 PIRSF PIRSF029509 13 162 5.2E-36 T 13-10-2018 IPR016923 Uncharacterised conserved protein UCP029509, membrane BEN78_07750 61e8533b40979a7eb069989b62fb879f 179 Pfam PF09990 Predicted membrane protein (DUF2231) 58 157 1.6E-18 T 13-10-2018 IPR019251 Domain of unknown function DUF2231, transmembrane BEN78_02285 38ae84fcc613c2e61b4234916efcb591 320 Gene3D G3DSA:3.30.479.30 52 181 8.3E-42 T 13-10-2018 BEN78_02285 38ae84fcc613c2e61b4234916efcb591 320 Pfam PF01145 SPFH domain / Band 7 family 25 195 1.0E-32 T 13-10-2018 IPR001107 Band 7 domain BEN78_02285 38ae84fcc613c2e61b4234916efcb591 320 Pfam PF16200 C-terminal region of band_7 240 297 8.9E-10 T 13-10-2018 IPR032435 Band 7, C-terminal extension Reactome: R-HSA-8949664 BEN78_02285 38ae84fcc613c2e61b4234916efcb591 320 SMART SM00244 21 179 8.7E-53 T 13-10-2018 IPR001107 Band 7 domain BEN78_02285 38ae84fcc613c2e61b4234916efcb591 320 ProSitePatterns PS01270 Band 7 protein family signature. 135 163 - T 13-10-2018 IPR018080 Band 7/stomatin-like, conserved site BEN78_02285 38ae84fcc613c2e61b4234916efcb591 320 PRINTS PR00721 Stomatin signature 111 128 1.9E-32 T 13-10-2018 IPR001972 Stomatin family GO:0016020 BEN78_02285 38ae84fcc613c2e61b4234916efcb591 320 PRINTS PR00721 Stomatin signature 76 97 1.9E-32 T 13-10-2018 IPR001972 Stomatin family GO:0016020 BEN78_02285 38ae84fcc613c2e61b4234916efcb591 320 PRINTS PR00721 Stomatin signature 131 154 1.9E-32 T 13-10-2018 IPR001972 Stomatin family GO:0016020 BEN78_02285 38ae84fcc613c2e61b4234916efcb591 320 PRINTS PR00721 Stomatin signature 155 173 1.9E-32 T 13-10-2018 IPR001972 Stomatin family GO:0016020 BEN78_02285 38ae84fcc613c2e61b4234916efcb591 320 PRINTS PR00721 Stomatin signature 174 195 1.9E-32 T 13-10-2018 IPR001972 Stomatin family GO:0016020 BEN78_02285 38ae84fcc613c2e61b4234916efcb591 320 SUPERFAMILY SSF117892 52 186 6.54E-41 T 13-10-2018 IPR036013 Band 7/SPFH domain superfamily BEN78_03310 5c10afd444c5f2e75f37e197b7b8791f 248 PIRSF PIRSF000090 1 248 3.6E-81 T 13-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 BEN78_03310 5c10afd444c5f2e75f37e197b7b8791f 248 SUPERFAMILY SSF52402 1 243 9.94E-79 T 13-10-2018 BEN78_03310 5c10afd444c5f2e75f37e197b7b8791f 248 SMART SM00893 23 211 4.2E-58 T 13-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 BEN78_03310 5c10afd444c5f2e75f37e197b7b8791f 248 Pfam PF01012 Electron transfer flavoprotein domain 26 206 8.9E-43 T 13-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 BEN78_03310 5c10afd444c5f2e75f37e197b7b8791f 248 Gene3D G3DSA:3.40.50.620 1 248 1.7E-81 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN78_16565 9c2438842b0a5cb8e13a7d16fdb6ae4a 229 TIGRFAM TIGR01691 enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 2 224 5.5E-80 T 13-10-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 BEN78_16565 9c2438842b0a5cb8e13a7d16fdb6ae4a 229 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 101 192 6.0E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BEN78_16565 9c2438842b0a5cb8e13a7d16fdb6ae4a 229 Gene3D G3DSA:3.40.50.1000 2 204 2.8E-70 T 13-10-2018 IPR023214 HAD superfamily BEN78_16565 9c2438842b0a5cb8e13a7d16fdb6ae4a 229 SUPERFAMILY SSF56784 2 223 6.71E-56 T 13-10-2018 IPR036412 HAD-like superfamily BEN78_16565 9c2438842b0a5cb8e13a7d16fdb6ae4a 229 Gene3D G3DSA:1.10.720.60 13 95 2.8E-70 T 13-10-2018 BEN78_16565 9c2438842b0a5cb8e13a7d16fdb6ae4a 229 Hamap MF_01681 Enolase-phosphatase E1 [mtnC]. 1 225 39.185 T 13-10-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 BEN78_01080 af657e95b2662ca073a5af99f9690ad5 199 SUPERFAMILY SSF52972 1 184 3.47E-54 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like BEN78_01080 af657e95b2662ca073a5af99f9690ad5 199 Pfam PF02545 Maf-like protein 2 184 5.6E-51 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 BEN78_01080 af657e95b2662ca073a5af99f9690ad5 199 Hamap MF_00528 Septum formation protein Maf [maf]. 1 189 30.546 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 BEN78_01080 af657e95b2662ca073a5af99f9690ad5 199 Gene3D G3DSA:3.90.950.10 1 188 1.6E-62 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like BEN78_01080 af657e95b2662ca073a5af99f9690ad5 199 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 182 5.5E-47 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 BEN78_01080 af657e95b2662ca073a5af99f9690ad5 199 PIRSF PIRSF006305 1 190 2.0E-48 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 BEN78_13715 5fb3c27f1ec82fd975705bb8cf57f233 190 Pfam PF13650 Aspartyl protease 59 161 1.6E-9 T 13-10-2018 BEN78_13715 5fb3c27f1ec82fd975705bb8cf57f233 190 SUPERFAMILY SSF50630 55 170 9.76E-8 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily BEN78_13715 5fb3c27f1ec82fd975705bb8cf57f233 190 Gene3D G3DSA:2.40.70.10 44 187 3.5E-16 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily BEN78_01205 030ea420ba8572192f9433e17ff339f1 232 Pfam PF04450 Peptidase of plants and bacteria 36 221 3.1E-17 T 13-10-2018 IPR007541 Uncharacterised protein family, basic secretory protein BEN78_10950 136c899f84fa33b36b54f4a907efa54a 558 SMART SM00028 411 444 11.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN78_10950 136c899f84fa33b36b54f4a907efa54a 558 SMART SM00028 307 340 420.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN78_10950 136c899f84fa33b36b54f4a907efa54a 558 SMART SM00028 445 479 330.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN78_10950 136c899f84fa33b36b54f4a907efa54a 558 SMART SM00028 513 546 0.0027 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN78_10950 136c899f84fa33b36b54f4a907efa54a 558 Pfam PF13429 Tetratricopeptide repeat 404 534 2.1E-7 T 13-10-2018 BEN78_10950 136c899f84fa33b36b54f4a907efa54a 558 Gene3D G3DSA:1.25.40.10 385 554 4.3E-26 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_10950 136c899f84fa33b36b54f4a907efa54a 558 SUPERFAMILY SSF48452 397 547 9.87E-24 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_10950 136c899f84fa33b36b54f4a907efa54a 558 SUPERFAMILY SSF48452 171 365 4.45E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_10950 136c899f84fa33b36b54f4a907efa54a 558 Gene3D G3DSA:1.25.40.10 22 370 5.6E-20 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_12000 1f3ae2016cac3d160b509b89fefa2307 136 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 12 121 24.776 T 13-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS BEN78_12000 1f3ae2016cac3d160b509b89fefa2307 136 SUPERFAMILY SSF81301 22 124 2.62E-37 T 13-10-2018 BEN78_12000 1f3ae2016cac3d160b509b89fefa2307 136 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 23 120 3.9E-36 T 13-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS BEN78_12000 1f3ae2016cac3d160b509b89fefa2307 136 Pfam PF02410 Ribosomal silencing factor during starvation 26 120 5.7E-27 T 13-10-2018 BEN78_12000 1f3ae2016cac3d160b509b89fefa2307 136 Gene3D G3DSA:3.30.460.10 19 130 3.0E-37 T 13-10-2018 BEN78_05955 dfd677d476d94660e68435eec7936c2b 282 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 249 281 7.3E-9 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 BEN78_05955 dfd677d476d94660e68435eec7936c2b 282 Pfam PF04471 Restriction endonuclease 99 207 1.7E-25 T 13-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 BEN78_05955 dfd677d476d94660e68435eec7936c2b 282 SUPERFAMILY SSF52980 102 211 5.01E-24 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 BEN78_05955 dfd677d476d94660e68435eec7936c2b 282 SUPERFAMILY SSF57783 247 282 1.09E-5 T 13-10-2018 BEN78_05955 dfd677d476d94660e68435eec7936c2b 282 Gene3D G3DSA:3.40.1350.10 103 212 1.9E-6 T 13-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 BEN78_16020 bc0df7a84d03325afcaf95b1078f5ee7 101 Pfam PF03692 Putative zinc- or iron-chelating domain 7 77 1.5E-9 T 13-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein BEN78_03585 821949b8032cc060d2d59f750c585015 220 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 7 204 2.4E-6 T 13-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 BEN78_08575 e0484670d42a2afce10322e6f35943f2 520 Pfam PF14891 Effector protein 341 518 1.3E-46 T 13-10-2018 IPR028208 Effector protein NleD-like BEN78_08575 e0484670d42a2afce10322e6f35943f2 520 SUPERFAMILY SSF51120 189 319 2.41E-20 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BEN78_08575 e0484670d42a2afce10322e6f35943f2 520 Gene3D G3DSA:2.160.20.160 69 351 9.6E-23 T 13-10-2018 BEN78_08575 e0484670d42a2afce10322e6f35943f2 520 PRINTS PR00313 NodO calcium binding signature 161 172 1.9E-5 T 13-10-2018 BEN78_08575 e0484670d42a2afce10322e6f35943f2 520 PRINTS PR00313 NodO calcium binding signature 204 212 1.9E-5 T 13-10-2018 BEN78_08575 e0484670d42a2afce10322e6f35943f2 520 PRINTS PR00313 NodO calcium binding signature 259 268 1.9E-5 T 13-10-2018 BEN78_08575 e0484670d42a2afce10322e6f35943f2 520 PRINTS PR00313 NodO calcium binding signature 241 249 1.9E-5 T 13-10-2018 BEN78_05105 874220b944fd3b93f931f0f5a4e10727 547 PRINTS PR00744 Glycosyl hydrolase family 37 signature 520 533 8.5E-40 T 13-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 BEN78_05105 874220b944fd3b93f931f0f5a4e10727 547 PRINTS PR00744 Glycosyl hydrolase family 37 signature 197 215 8.5E-40 T 13-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 BEN78_05105 874220b944fd3b93f931f0f5a4e10727 547 PRINTS PR00744 Glycosyl hydrolase family 37 signature 305 322 8.5E-40 T 13-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 BEN78_05105 874220b944fd3b93f931f0f5a4e10727 547 PRINTS PR00744 Glycosyl hydrolase family 37 signature 337 354 8.5E-40 T 13-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 BEN78_05105 874220b944fd3b93f931f0f5a4e10727 547 PRINTS PR00744 Glycosyl hydrolase family 37 signature 443 459 8.5E-40 T 13-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 BEN78_05105 874220b944fd3b93f931f0f5a4e10727 547 PRINTS PR00744 Glycosyl hydrolase family 37 signature 271 288 8.5E-40 T 13-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 BEN78_05105 874220b944fd3b93f931f0f5a4e10727 547 ProSitePatterns PS00928 Trehalase signature 2. 450 459 - T 13-10-2018 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 BEN78_05105 874220b944fd3b93f931f0f5a4e10727 547 Gene3D G3DSA:1.50.10.10 49 545 4.6E-163 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 BEN78_05105 874220b944fd3b93f931f0f5a4e10727 547 SUPERFAMILY SSF48208 45 536 2.55E-148 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BEN78_05105 874220b944fd3b93f931f0f5a4e10727 547 Pfam PF01204 Trehalase 62 536 9.2E-150 T 13-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 BEN78_05105 874220b944fd3b93f931f0f5a4e10727 547 ProSitePatterns PS00927 Trehalase signature 1. 155 168 - T 13-10-2018 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 BEN78_07715 d31efa0b8281641d88341f5612f06b4f 362 SMART SM00749 220 283 1.4E-4 T 13-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria BEN78_07715 d31efa0b8281641d88341f5612f06b4f 362 Pfam PF04972 BON domain 215 282 8.4E-16 T 13-10-2018 IPR007055 BON domain BEN78_00985 c3be36399113c4657718ec21d0000ee0 151 Gene3D G3DSA:3.10.129.10 1 150 4.7E-55 T 13-10-2018 BEN78_00985 c3be36399113c4657718ec21d0000ee0 151 Pfam PF07977 FabA-like domain 18 140 3.2E-34 T 13-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BEN78_00985 c3be36399113c4657718ec21d0000ee0 151 SUPERFAMILY SSF54637 11 149 4.98E-43 T 13-10-2018 IPR029069 HotDog domain superfamily BEN78_00985 c3be36399113c4657718ec21d0000ee0 151 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 9 147 2.9E-55 T 13-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BEN78_00985 c3be36399113c4657718ec21d0000ee0 151 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 9 150 32.055 T 13-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BEN78_06965 96eaf59eaa081d4af26e071f0e2e51b3 670 Pfam PF12697 Alpha/beta hydrolase family 373 637 1.9E-6 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN78_06965 96eaf59eaa081d4af26e071f0e2e51b3 670 Gene3D G3DSA:3.40.50.1820 364 630 1.4E-24 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_06965 96eaf59eaa081d4af26e071f0e2e51b3 670 SUPERFAMILY SSF53474 366 637 1.17E-23 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_14175 46eee82d0b747a5099ba83d672671a99 144 Gene3D G3DSA:3.30.530.20 1 142 4.3E-29 T 13-10-2018 IPR023393 START-like domain superfamily BEN78_14175 46eee82d0b747a5099ba83d672671a99 144 SUPERFAMILY SSF55961 1 140 5.91E-34 T 13-10-2018 BEN78_14175 46eee82d0b747a5099ba83d672671a99 144 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 11 134 1.2E-27 T 13-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 BEN78_08090 fb464d48594999d665991900ffe69052 789 SUPERFAMILY SSF53474 532 789 2.18E-64 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_08090 fb464d48594999d665991900ffe69052 789 Gene3D G3DSA:2.140.10.30 331 527 4.9E-25 T 13-10-2018 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily BEN78_08090 fb464d48594999d665991900ffe69052 789 Gene3D G3DSA:2.120.10.30 31 179 1.1E-9 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BEN78_08090 fb464d48594999d665991900ffe69052 789 Gene3D G3DSA:3.40.50.1820 528 786 3.8E-66 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_08090 fb464d48594999d665991900ffe69052 789 SUPERFAMILY SSF82171 39 533 1.15E-41 T 13-10-2018 BEN78_08090 fb464d48594999d665991900ffe69052 789 Pfam PF00326 Prolyl oligopeptidase family 594 788 7.0E-44 T 13-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 BEN78_08090 fb464d48594999d665991900ffe69052 789 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 345 502 8.3E-14 T 13-10-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 BEN78_05555 d4ae2c293d0e46959f4da276061de89f 88 Pfam PF01313 Bacterial export proteins, family 3 4 75 5.6E-22 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BEN78_05555 d4ae2c293d0e46959f4da276061de89f 88 PIRSF PIRSF004669 2 87 4.3E-23 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BEN78_05555 d4ae2c293d0e46959f4da276061de89f 88 TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family 3 82 1.1E-27 T 13-10-2018 IPR006306 Type III secretion protein HrpO GO:0009306|GO:0016021 BEN78_05555 d4ae2c293d0e46959f4da276061de89f 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 52 74 3.6E-19 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BEN78_05555 d4ae2c293d0e46959f4da276061de89f 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 37 52 3.6E-19 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BEN78_05555 d4ae2c293d0e46959f4da276061de89f 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 16 37 3.6E-19 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BEN78_05040 5bd502ba85c3024e103eed99b0af19f7 362 Pfam PF00953 Glycosyl transferase family 4 80 239 1.4E-34 T 13-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 BEN78_05600 c70a8856e6a18acc74ab491f226f13e3 69 Pfam PF04325 Protein of unknown function (DUF465) 16 60 9.4E-13 T 13-10-2018 IPR007420 Protein of unknown function DUF465 BEN78_05600 c70a8856e6a18acc74ab491f226f13e3 69 Gene3D G3DSA:1.20.58.660 5 63 7.9E-6 T 13-10-2018 BEN78_10100 37bddafff2cccfa3ee029d4208893b60 209 Pfam PF01339 CheB methylesterase 30 109 5.3E-12 T 13-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 BEN78_10100 37bddafff2cccfa3ee029d4208893b60 209 Gene3D G3DSA:3.40.50.180 23 137 1.9E-13 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal BEN78_10100 37bddafff2cccfa3ee029d4208893b60 209 SUPERFAMILY SSF52738 25 194 1.05E-18 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal BEN78_15770 1f2a34ae44c3443d83c4132a56fe2702 593 SMART SM00631 43 274 7.7E-5 T 13-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 BEN78_15770 1f2a34ae44c3443d83c4132a56fe2702 593 Gene3D G3DSA:3.40.630.10 35 326 4.5E-29 T 13-10-2018 BEN78_15770 1f2a34ae44c3443d83c4132a56fe2702 593 Pfam PF00246 Zinc carboxypeptidase 49 223 1.8E-30 T 13-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 BEN78_15770 1f2a34ae44c3443d83c4132a56fe2702 593 SUPERFAMILY SSF53187 42 314 2.28E-46 T 13-10-2018 BEN78_01210 48892fc5d50d5630b5a4bdd30f71e864 76 SUPERFAMILY SSF47598 3 53 1.37E-5 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 BEN78_15135 a0dba0cb85b4899a106c1d1f419dcfb6 325 SMART SM00849 90 295 2.2E-16 T 13-10-2018 IPR001279 Metallo-beta-lactamase BEN78_15135 a0dba0cb85b4899a106c1d1f419dcfb6 325 Gene3D G3DSA:3.60.15.10 30 324 5.9E-88 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN78_15135 a0dba0cb85b4899a106c1d1f419dcfb6 325 SUPERFAMILY SSF56281 36 306 1.26E-43 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN78_15135 a0dba0cb85b4899a106c1d1f419dcfb6 325 Pfam PF00753 Metallo-beta-lactamase superfamily 89 277 1.2E-20 T 13-10-2018 IPR001279 Metallo-beta-lactamase BEN78_01550 636e68bc8ce00727bf1e3d3f0b7ad6e6 228 Pfam PF07077 Protein of unknown function (DUF1345) 50 219 6.6E-57 T 13-10-2018 IPR009781 Protein of unknown function DUF1345 BEN78_16005 b4a726f57384933d485f034a56b12c8e 81 Gene3D G3DSA:1.10.10.1130 1 78 3.9E-29 T 13-10-2018 BEN78_16005 b4a726f57384933d485f034a56b12c8e 81 Pfam PF10982 Protein of unknown function (DUF2789) 4 74 1.3E-29 T 13-10-2018 IPR021250 Protein of unknown function DUF2789 BEN78_02920 9d13380d69b8e3ea9e4303d250fa7c0e 596 Pfam PF00723 Glycosyl hydrolases family 15 222 526 5.2E-30 T 13-10-2018 IPR011613 GH15-like domain Reactome: R-HSA-70221 BEN78_02920 9d13380d69b8e3ea9e4303d250fa7c0e 596 Gene3D G3DSA:1.50.10.10 221 594 2.6E-78 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 BEN78_02920 9d13380d69b8e3ea9e4303d250fa7c0e 596 SUPERFAMILY SSF48208 207 593 4.82E-92 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BEN78_12675 224db64dbc86f55a1a1db11a37d44fc8 610 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 567 609 2.3E-14 T 13-10-2018 IPR020011 Motility protein FimV, C-terminal BEN78_12675 224db64dbc86f55a1a1db11a37d44fc8 610 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 232 305 8.1E-16 T 13-10-2018 IPR020012 Motility protein FimV, N-terminal BEN78_12675 224db64dbc86f55a1a1db11a37d44fc8 610 Gene3D G3DSA:1.20.58.2200 559 609 1.2E-11 T 13-10-2018 IPR038440 FimV, C-terminal domain superfamily BEN78_01350 e4014c0c1599bc26438624d5288f9f1b 964 Gene3D G3DSA:2.170.130.10 46 182 5.2E-12 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_01350 e4014c0c1599bc26438624d5288f9f1b 964 Pfam PF00593 TonB dependent receptor 438 963 1.8E-31 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_01350 e4014c0c1599bc26438624d5288f9f1b 964 Pfam PF07715 TonB-dependent Receptor Plug Domain 73 177 1.8E-11 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_01350 e4014c0c1599bc26438624d5288f9f1b 964 SUPERFAMILY SSF56935 44 964 6.07E-73 T 13-10-2018 BEN78_01350 e4014c0c1599bc26438624d5288f9f1b 964 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 54 964 1.7E-157 T 13-10-2018 IPR010104 Bacterial TonB-dependent receptor BEN78_06530 ae49694ff48b95407a6b5ddc23b55f96 202 SMART SM00563 51 164 6.6E-21 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BEN78_06530 ae49694ff48b95407a6b5ddc23b55f96 202 Pfam PF01553 Acyltransferase 55 160 3.7E-12 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BEN78_06530 ae49694ff48b95407a6b5ddc23b55f96 202 SUPERFAMILY SSF69593 6 185 2.62E-24 T 13-10-2018 BEN78_14420 515d476e9a70d7bc104e644b02d78c08 259 PIRSF PIRSF009320 1 80 1.8E-12 T 13-10-2018 BEN78_14420 515d476e9a70d7bc104e644b02d78c08 259 PIRSF PIRSF009320 86 247 2.3E-8 T 13-10-2018 BEN78_14420 515d476e9a70d7bc104e644b02d78c08 259 Gene3D G3DSA:3.40.50.300 1 256 2.2E-61 T 13-10-2018 BEN78_14420 515d476e9a70d7bc104e644b02d78c08 259 Pfam PF13614 AAA domain 1 172 6.9E-38 T 13-10-2018 IPR025669 AAA domain BEN78_14420 515d476e9a70d7bc104e644b02d78c08 259 SUPERFAMILY SSF52540 1 251 9.04E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_14740 0e063869b60acb888d0c95b4cbc1d2d6 401 Pfam PF10011 Predicted membrane protein (DUF2254) 1 353 3.3E-93 T 13-10-2018 IPR018723 Protein of unknown function DUF2254, membrane BEN78_02060 d9ad7e718f02a42dcdb06e7253edc26e 74 Pfam PF04328 Selenoprotein, putative 15 74 7.7E-25 T 13-10-2018 IPR007423 Selenoprotein, putative BEN78_06000 4e43b011d19b27223c8bfdcbc0a1b8b6 182 Pfam PF11162 Protein of unknown function (DUF2946) 61 176 8.0E-13 T 13-10-2018 IPR021333 Protein of unknown function DUF2946 BEN78_02250 9503d0c3e36caec12feb49d72ccc2ad6 506 Pfam PF01546 Peptidase family M20/M25/M40 95 476 4.1E-23 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 BEN78_02250 9503d0c3e36caec12feb49d72ccc2ad6 506 SUPERFAMILY SSF53187 14 477 7.18E-50 T 13-10-2018 BEN78_02250 9503d0c3e36caec12feb49d72ccc2ad6 506 Pfam PF07687 Peptidase dimerisation domain 207 377 9.3E-15 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain BEN78_02250 9503d0c3e36caec12feb49d72ccc2ad6 506 Gene3D G3DSA:3.40.630.10 2 226 6.2E-52 T 13-10-2018 BEN78_02250 9503d0c3e36caec12feb49d72ccc2ad6 506 Gene3D G3DSA:3.40.630.10 358 482 1.4E-22 T 13-10-2018 BEN78_09380 2e7874d7d9ae9c6854e8750850a9a12a 212 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site BEN78_09380 2e7874d7d9ae9c6854e8750850a9a12a 212 SUPERFAMILY SSF54523 8 121 8.37E-5 T 13-10-2018 BEN78_09380 2e7874d7d9ae9c6854e8750850a9a12a 212 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 28 5.6E-7 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site BEN78_09380 2e7874d7d9ae9c6854e8750850a9a12a 212 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 6.3E-6 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site BEN78_16345 8c2f8f983e137e910702f3dfc310db95 216 Pfam PF03942 DTW domain 5 184 1.2E-46 T 13-10-2018 IPR005636 DTW BEN78_16345 8c2f8f983e137e910702f3dfc310db95 216 SMART SM01144 2 189 7.5E-66 T 13-10-2018 IPR005636 DTW BEN78_01950 376e223b6d576205970e3fd4180fbb98 110 Pfam PF11743 Protein of unknown function (DUF3301) 8 100 8.7E-31 T 13-10-2018 IPR021732 Protein of unknown function DUF3301 BEN78_12930 92e39a0731ed251f4086509815f42b4a 181 SUPERFAMILY SSF53474 9 171 4.75E-22 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_12930 92e39a0731ed251f4086509815f42b4a 181 Pfam PF05728 Uncharacterised protein family (UPF0227) 16 114 2.2E-5 T 13-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA BEN78_12930 92e39a0731ed251f4086509815f42b4a 181 Gene3D G3DSA:3.40.50.1820 8 181 4.9E-41 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_14350 b2bdf282cef8fb49bbaaa35ae975c643 322 Pfam PF07920 Protein of unknown function (DUF1684) 169 297 1.2E-38 T 13-10-2018 IPR012467 Protein of unknown function DUF1684 BEN78_10980 4d4df477c1b68bc8355931e1030ad50e 194 Gene3D G3DSA:3.40.50.1470 2 194 1.6E-61 T 13-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 BEN78_10980 4d4df477c1b68bc8355931e1030ad50e 194 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 18 31 - T 13-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 BEN78_10980 4d4df477c1b68bc8355931e1030ad50e 194 SUPERFAMILY SSF53178 6 191 2.75E-65 T 13-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 BEN78_10980 4d4df477c1b68bc8355931e1030ad50e 194 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 5 183 34.304 T 13-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 BEN78_10980 4d4df477c1b68bc8355931e1030ad50e 194 Pfam PF01195 Peptidyl-tRNA hydrolase 7 189 2.9E-50 T 13-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 BEN78_10980 4d4df477c1b68bc8355931e1030ad50e 194 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 6 190 2.2E-59 T 13-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 BEN78_10765 95c467a6de47858da6e0a59092491492 179 Gene3D G3DSA:1.10.340.30 3 172 1.9E-43 T 13-10-2018 BEN78_10765 95c467a6de47858da6e0a59092491492 179 Pfam PF03352 Methyladenine glycosylase 12 125 2.2E-38 T 13-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 BEN78_10765 95c467a6de47858da6e0a59092491492 179 SUPERFAMILY SSF48150 4 171 7.22E-50 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 BEN78_01020 28f46c203ce18c160718085a40f8814e 353 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 3 337 2.1E-65 T 13-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 BEN78_01020 28f46c203ce18c160718085a40f8814e 353 SUPERFAMILY SSF51395 1 345 4.58E-116 T 13-10-2018 BEN78_01020 28f46c203ce18c160718085a40f8814e 353 Gene3D G3DSA:3.20.20.70 1 353 1.0E-123 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_14835 a55c366b7df9be5ed61d40bb9b1e28b9 382 Pfam PF05275 Copper resistance protein B precursor (CopB) 179 382 7.3E-77 T 13-10-2018 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 BEN78_14660 688950294cb5231e3f538c683458ae50 105 SUPERFAMILY SSF101498 24 98 1.2E-13 T 13-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily BEN78_14660 688950294cb5231e3f538c683458ae50 105 Pfam PF04316 Anti-sigma-28 factor, FlgM 44 98 3.3E-14 T 13-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal BEN78_14660 688950294cb5231e3f538c683458ae50 105 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 4 98 3.2E-20 T 13-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 BEN78_13535 887c5bd537ab44d8a74a4364a0c34d5c 886 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 45 884 2.4E-113 T 13-10-2018 IPR010104 Bacterial TonB-dependent receptor BEN78_13535 887c5bd537ab44d8a74a4364a0c34d5c 886 Gene3D G3DSA:2.170.130.10 37 176 3.5E-9 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_13535 887c5bd537ab44d8a74a4364a0c34d5c 886 Pfam PF07715 TonB-dependent Receptor Plug Domain 63 170 6.3E-9 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_13535 887c5bd537ab44d8a74a4364a0c34d5c 886 Pfam PF00593 TonB dependent receptor 455 883 2.0E-29 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_13535 887c5bd537ab44d8a74a4364a0c34d5c 886 SUPERFAMILY SSF56935 37 884 1.01E-60 T 13-10-2018 BEN78_04675 6705b22d2ed7a85b2d0a46874fab84bc 118 SUPERFAMILY SSF54593 9 118 1.32E-24 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN78_04675 6705b22d2ed7a85b2d0a46874fab84bc 118 Gene3D G3DSA:3.10.180.10 1 118 5.9E-22 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN78_04675 6705b22d2ed7a85b2d0a46874fab84bc 118 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 113 6.7E-6 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BEN78_15945 ea703cef0424dd02fdb01e239e5c6827 296 Pfam PF00849 RNA pseudouridylate synthase 97 244 1.2E-23 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN78_15945 ea703cef0424dd02fdb01e239e5c6827 296 SUPERFAMILY SSF55120 90 292 7.74E-48 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN78_15945 ea703cef0424dd02fdb01e239e5c6827 296 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 136 150 - T 13-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN78_15945 ea703cef0424dd02fdb01e239e5c6827 296 Gene3D G3DSA:3.30.2350.10 85 293 2.0E-40 T 13-10-2018 BEN78_10220 ef5739527d685d6f2a41264867d8a9c0 181 SUPERFAMILY SSF53597 19 180 5.13E-45 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 BEN78_10220 ef5739527d685d6f2a41264867d8a9c0 181 PRINTS PR00070 Dihydrofolate reductase signature 45 53 6.8E-10 T 13-10-2018 BEN78_10220 ef5739527d685d6f2a41264867d8a9c0 181 PRINTS PR00070 Dihydrofolate reductase signature 58 69 6.8E-10 T 13-10-2018 BEN78_10220 ef5739527d685d6f2a41264867d8a9c0 181 PRINTS PR00070 Dihydrofolate reductase signature 111 125 6.8E-10 T 13-10-2018 BEN78_10220 ef5739527d685d6f2a41264867d8a9c0 181 PRINTS PR00070 Dihydrofolate reductase signature 31 41 6.8E-10 T 13-10-2018 BEN78_10220 ef5739527d685d6f2a41264867d8a9c0 181 PIRSF PIRSF000194 15 181 2.7E-53 T 13-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 BEN78_10220 ef5739527d685d6f2a41264867d8a9c0 181 Pfam PF00186 Dihydrofolate reductase 20 180 3.0E-49 T 13-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 BEN78_10220 ef5739527d685d6f2a41264867d8a9c0 181 Gene3D G3DSA:3.40.430.10 19 181 5.5E-46 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 BEN78_02910 a25bbaf871cccd36aca3938ac5138ff4 241 Gene3D G3DSA:1.20.1050.10 86 204 1.3E-85 T 13-10-2018 BEN78_02910 a25bbaf871cccd36aca3938ac5138ff4 241 SUPERFAMILY SSF52833 1 82 8.34E-15 T 13-10-2018 IPR036249 Thioredoxin-like superfamily BEN78_02910 a25bbaf871cccd36aca3938ac5138ff4 241 SUPERFAMILY SSF47616 82 233 1.85E-21 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BEN78_02910 a25bbaf871cccd36aca3938ac5138ff4 241 Gene3D G3DSA:3.40.30.10 3 233 1.3E-85 T 13-10-2018 BEN78_02910 a25bbaf871cccd36aca3938ac5138ff4 241 Pfam PF14497 Glutathione S-transferase, C-terminal domain 109 214 2.4E-24 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal BEN78_03885 8f8cfcc39d7ff3b2383ebdc900031b02 227 Pfam PF04338 Protein of unknown function, DUF481 96 227 4.1E-16 T 13-10-2018 IPR007433 Protein of unknown function DUF481 BEN78_00665 d93a5025680e15b2fe3ff7ad2efb191b 113 Gene3D G3DSA:3.30.1360.20 20 113 6.0E-32 T 13-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 BEN78_00665 d93a5025680e15b2fe3ff7ad2efb191b 113 SUPERFAMILY SSF55248 21 112 1.1E-31 T 13-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 BEN78_00665 d93a5025680e15b2fe3ff7ad2efb191b 113 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 19 112 24.346 T 13-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 BEN78_00665 d93a5025680e15b2fe3ff7ad2efb191b 113 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 21 110 6.8E-28 T 13-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 BEN78_11670 795b222116c1777dfe964b52ae528fe4 284 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 35 2.5E-5 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site BEN78_07910 b20316529ec1915852172358a0aa83db 547 SUPERFAMILY SSF51905 14 401 4.54E-31 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_07910 b20316529ec1915852172358a0aa83db 547 Gene3D G3DSA:3.50.50.60 11 400 2.9E-86 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_07910 b20316529ec1915852172358a0aa83db 547 Pfam PF01494 FAD binding domain 14 219 9.9E-13 T 13-10-2018 IPR002938 FAD-binding domain GO:0071949 BEN78_10515 877cd7bbf1d495772d8343bceb977819 200 SUPERFAMILY SSF140478 28 185 3.66E-52 T 13-10-2018 IPR023353 LemA-like domain superfamily BEN78_10515 877cd7bbf1d495772d8343bceb977819 200 Gene3D G3DSA:1.20.1440.20 21 200 4.3E-60 T 13-10-2018 IPR023353 LemA-like domain superfamily BEN78_10515 877cd7bbf1d495772d8343bceb977819 200 Pfam PF04011 LemA family 10 200 4.0E-65 T 13-10-2018 IPR007156 LemA BEN78_12795 4c808f7b72d8b242d41a9aa75f15b8bb 712 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 115 135 1.2E-64 T 13-10-2018 BEN78_12795 4c808f7b72d8b242d41a9aa75f15b8bb 712 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 162 183 1.2E-64 T 13-10-2018 BEN78_12795 4c808f7b72d8b242d41a9aa75f15b8bb 712 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 87 112 1.2E-64 T 13-10-2018 BEN78_12795 4c808f7b72d8b242d41a9aa75f15b8bb 712 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 240 261 1.2E-64 T 13-10-2018 BEN78_12795 4c808f7b72d8b242d41a9aa75f15b8bb 712 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 437 456 1.2E-64 T 13-10-2018 BEN78_12795 4c808f7b72d8b242d41a9aa75f15b8bb 712 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 262 288 1.2E-64 T 13-10-2018 BEN78_12795 4c808f7b72d8b242d41a9aa75f15b8bb 712 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 330 342 1.2E-64 T 13-10-2018 BEN78_12795 4c808f7b72d8b242d41a9aa75f15b8bb 712 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 63 87 2.6E-13 T 13-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 BEN78_12795 4c808f7b72d8b242d41a9aa75f15b8bb 712 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 517 538 2.6E-13 T 13-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 BEN78_12795 4c808f7b72d8b242d41a9aa75f15b8bb 712 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 648 674 2.6E-13 T 13-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 BEN78_12795 4c808f7b72d8b242d41a9aa75f15b8bb 712 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 436 458 2.6E-13 T 13-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 BEN78_12795 4c808f7b72d8b242d41a9aa75f15b8bb 712 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 89 109 2.6E-13 T 13-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 BEN78_12795 4c808f7b72d8b242d41a9aa75f15b8bb 712 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 280 302 2.6E-13 T 13-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 BEN78_12795 4c808f7b72d8b242d41a9aa75f15b8bb 712 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 9 707 2.1E-235 T 13-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12795 4c808f7b72d8b242d41a9aa75f15b8bb 712 Pfam PF00361 Proton-conducting membrane transporter 139 423 5.0E-88 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_12795 4c808f7b72d8b242d41a9aa75f15b8bb 712 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 69 126 5.9E-25 T 13-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN78_02170 cdafa6321e48ab3860d65364279771c7 200 Gene3D G3DSA:2.70.70.10 32 194 1.8E-41 T 13-10-2018 IPR011055 Duplicated hybrid motif BEN78_02170 cdafa6321e48ab3860d65364279771c7 200 Pfam PF01551 Peptidase family M23 85 183 4.7E-21 T 13-10-2018 IPR016047 Peptidase M23 BEN78_02170 cdafa6321e48ab3860d65364279771c7 200 SUPERFAMILY SSF51261 58 187 1.83E-33 T 13-10-2018 IPR011055 Duplicated hybrid motif BEN78_00095 cf4b844264a2e14a227e16b5c65aacc3 100 Pfam PF04250 Protein of unknown function (DUF429) 1 87 8.9E-21 T 13-10-2018 IPR007362 Protein of unknown function DUF429 BEN78_01360 f5d104ee4c7e0a1f007956f2d1b83af9 744 Pfam PF05426 Alginate lyase 71 307 8.8E-21 T 13-10-2018 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 BEN78_01360 f5d104ee4c7e0a1f007956f2d1b83af9 744 Gene3D G3DSA:1.50.10.100 40 377 3.0E-112 T 13-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 BEN78_01360 f5d104ee4c7e0a1f007956f2d1b83af9 744 Pfam PF07940 Heparinase II/III-like protein 384 650 1.8E-37 T 13-10-2018 IPR012480 Heparinase II/III-like GO:0016829 BEN78_01360 f5d104ee4c7e0a1f007956f2d1b83af9 744 Gene3D G3DSA:2.70.98.70 380 734 1.4E-93 T 13-10-2018 BEN78_01360 f5d104ee4c7e0a1f007956f2d1b83af9 744 SUPERFAMILY SSF48230 79 319 1.01E-45 T 13-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 BEN78_16730 14be171422abfc16f71e3f147a68e3c1 368 Pfam PF01546 Peptidase family M20/M25/M40 68 362 7.7E-19 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 BEN78_16730 14be171422abfc16f71e3f147a68e3c1 368 Pfam PF07687 Peptidase dimerisation domain 164 270 3.5E-15 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain BEN78_16730 14be171422abfc16f71e3f147a68e3c1 368 Gene3D G3DSA:3.40.630.10 15 352 1.0E-113 T 13-10-2018 BEN78_16730 14be171422abfc16f71e3f147a68e3c1 368 SUPERFAMILY SSF53187 5 362 1.29E-34 T 13-10-2018 BEN78_16730 14be171422abfc16f71e3f147a68e3c1 368 Gene3D G3DSA:3.30.70.360 167 280 1.0E-113 T 13-10-2018 BEN78_16730 14be171422abfc16f71e3f147a68e3c1 368 SUPERFAMILY SSF55031 166 273 4.71E-11 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain BEN78_05950 b2fe16cd4fc536588f053b8eef7b5404 417 Gene3D G3DSA:2.40.10.10 291 403 3.2E-16 T 13-10-2018 BEN78_05950 b2fe16cd4fc536588f053b8eef7b5404 417 Gene3D G3DSA:2.40.10.10 222 415 3.2E-16 T 13-10-2018 BEN78_05950 b2fe16cd4fc536588f053b8eef7b5404 417 SUPERFAMILY SSF50494 222 408 4.62E-11 T 13-10-2018 IPR009003 Peptidase S1, PA clan BEN78_05950 b2fe16cd4fc536588f053b8eef7b5404 417 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 241 246 - T 13-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 BEN78_13950 dac270961edf6b1779561b8545546828 262 Pfam PF02525 Flavodoxin-like fold 1 213 7.8E-55 T 13-10-2018 IPR003680 Flavodoxin-like fold BEN78_13950 dac270961edf6b1779561b8545546828 262 SUPERFAMILY SSF52218 1 233 1.77E-68 T 13-10-2018 IPR029039 Flavoprotein-like superfamily BEN78_13950 dac270961edf6b1779561b8545546828 262 Gene3D G3DSA:3.40.50.360 1 254 1.2E-85 T 13-10-2018 IPR029039 Flavoprotein-like superfamily BEN78_04710 6e86330bcbd27c784f5a21ec095c689d 325 SUPERFAMILY SSF53067 5 323 1.34E-52 T 13-10-2018 BEN78_04710 6e86330bcbd27c784f5a21ec095c689d 325 Gene3D G3DSA:3.40.367.20 107 306 2.1E-90 T 13-10-2018 BEN78_04710 6e86330bcbd27c784f5a21ec095c689d 325 Gene3D G3DSA:3.30.420.40 6 317 2.1E-90 T 13-10-2018 BEN78_04710 6e86330bcbd27c784f5a21ec095c689d 325 Pfam PF02685 Glucokinase 6 320 1.1E-95 T 13-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 BEN78_02190 c9fc6f7e0348402f9bb9840645dd07ab 159 Pfam PF00856 SET domain 18 126 2.4E-20 T 13-10-2018 IPR001214 SET domain GO:0005515 BEN78_02190 c9fc6f7e0348402f9bb9840645dd07ab 159 SUPERFAMILY SSF82199 3 152 6.8E-43 T 13-10-2018 BEN78_02190 c9fc6f7e0348402f9bb9840645dd07ab 159 Gene3D G3DSA:2.170.270.10 1 159 1.0E-43 T 13-10-2018 BEN78_02190 c9fc6f7e0348402f9bb9840645dd07ab 159 SMART SM00317 7 132 1.9E-30 T 13-10-2018 IPR001214 SET domain GO:0005515 BEN78_04335 8c4dc954980cad8f3adf8826a9133c3a 533 Pfam PF13559 Domain of unknown function (DUF4129) 455 525 1.5E-9 T 13-10-2018 IPR025403 Domain of unknown function DUF4129 BEN78_06720 99c2948ea77a3b118ef84f874132f8f2 182 SUPERFAMILY SSF49329 51 179 3.4E-17 T 13-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BEN78_06720 99c2948ea77a3b118ef84f874132f8f2 182 Gene3D G3DSA:2.60.40.200 39 180 2.2E-17 T 13-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BEN78_06720 99c2948ea77a3b118ef84f874132f8f2 182 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 57 179 2.5E-12 T 13-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BEN78_11890 7e4859058a4de725d07427dfdb81c3e8 557 SMART SM00257 24 69 1.9E-10 T 13-10-2018 IPR018392 LysM domain BEN78_11890 7e4859058a4de725d07427dfdb81c3e8 557 Pfam PF01476 LysM domain 25 69 1.4E-9 T 13-10-2018 IPR018392 LysM domain BEN78_11890 7e4859058a4de725d07427dfdb81c3e8 557 Gene3D G3DSA:3.10.350.10 9 83 7.6E-14 T 13-10-2018 IPR036779 LysM domain superfamily BEN78_11890 7e4859058a4de725d07427dfdb81c3e8 557 SUPERFAMILY SSF54106 23 69 1.44E-8 T 13-10-2018 BEN78_16190 d77ca042f2132415e41b2a616a031516 698 Pfam PF02065 Melibiase 309 498 4.8E-13 T 13-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 BEN78_16190 d77ca042f2132415e41b2a616a031516 698 SUPERFAMILY SSF51445 299 523 2.7E-43 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily BEN78_16190 d77ca042f2132415e41b2a616a031516 698 Gene3D G3DSA:3.20.20.70 285 547 3.6E-41 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_16330 1d0e09fc1ef2620d1240a7b7db5a169c 383 Gene3D G3DSA:1.10.630.10 253 352 1.1E-20 T 13-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 BEN78_16330 1d0e09fc1ef2620d1240a7b7db5a169c 383 Pfam PF00067 Cytochrome P450 259 340 1.5E-15 T 13-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 BEN78_16330 1d0e09fc1ef2620d1240a7b7db5a169c 383 SUPERFAMILY SSF48264 5 343 4.71E-24 T 13-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 BEN78_03365 16fe5f67b3cbf949b29542d5342178cc 126 Pfam PF14346 Domain of unknown function (DUF4398) 20 119 8.4E-21 T 13-10-2018 IPR025511 Domain of unknown function DUF4398 BEN78_03365 16fe5f67b3cbf949b29542d5342178cc 126 Gene3D G3DSA:1.20.1270.390 28 125 7.8E-12 T 13-10-2018 BEN78_13180 d5a9b45d6dc66e717746f28cd326b245 347 Gene3D G3DSA:3.40.50.2000 1 151 2.4E-23 T 13-10-2018 BEN78_13180 d5a9b45d6dc66e717746f28cd326b245 347 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 295 2.4E-42 T 13-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 BEN78_13180 d5a9b45d6dc66e717746f28cd326b245 347 SUPERFAMILY SSF53756 1 340 1.15E-75 T 13-10-2018 BEN78_13180 d5a9b45d6dc66e717746f28cd326b245 347 Gene3D G3DSA:3.40.50.2000 158 333 9.2E-39 T 13-10-2018 BEN78_08680 b7805e1ebe18754d2df9d724cea4b7bf 377 Pfam PF10933 Protein of unknown function (DUF2827) 8 367 8.9E-139 T 13-10-2018 IPR021234 Protein of unknown function DUF2827 BEN78_05845 53bb0f02b3c3a9e77f0dc509f485d1bd 152 Gene3D G3DSA:1.10.10.10 22 92 2.6E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_05845 53bb0f02b3c3a9e77f0dc509f485d1bd 152 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 93 146 3.4E-12 T 13-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 BEN78_05845 53bb0f02b3c3a9e77f0dc509f485d1bd 152 Gene3D G3DSA:1.10.60.10 93 151 1.4E-23 T 13-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 BEN78_05845 53bb0f02b3c3a9e77f0dc509f485d1bd 152 SMART SM00529 54 152 4.6E-32 T 13-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 BEN78_05845 53bb0f02b3c3a9e77f0dc509f485d1bd 152 SUPERFAMILY SSF46785 46 116 2.4E-14 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_05845 53bb0f02b3c3a9e77f0dc509f485d1bd 152 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 33 90 7.2E-13 T 13-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 BEN78_15630 260e78a0d2df5510db7955cdb2ed1191 257 Pfam PF05433 Glycine zipper 2TM domain 108 148 1.6E-10 T 13-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 BEN78_05430 e89c44bd9a706a0c5ef18859b46acc35 304 SUPERFAMILY SSF56784 102 283 5.71E-32 T 13-10-2018 IPR036412 HAD-like superfamily BEN78_05430 e89c44bd9a706a0c5ef18859b46acc35 304 PIRSF PIRSF019271 1 304 2.7E-80 T 13-10-2018 IPR006423 5-nucleotidase lipoprotein e(P4) GO:0009279 BEN78_05430 e89c44bd9a706a0c5ef18859b46acc35 304 Gene3D G3DSA:3.40.50.1000 34 304 4.3E-75 T 13-10-2018 IPR023214 HAD superfamily BEN78_05430 e89c44bd9a706a0c5ef18859b46acc35 304 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 103 276 1.1E-39 T 13-10-2018 IPR005519 Acid phosphatase, class B-like BEN78_06505 e6d37f157c7957eba605f5c1e9a3adec 262 Pfam PF01061 ABC-2 type transporter 15 224 3.1E-34 T 13-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 BEN78_06505 e6d37f157c7957eba605f5c1e9a3adec 262 PIRSF PIRSF006648 1 259 6.5E-28 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 BEN78_04115 4fa341755fffb4413d6eb38e3f08ca50 509 Gene3D G3DSA:3.50.50.60 9 495 4.2E-176 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_04115 4fa341755fffb4413d6eb38e3f08ca50 509 PIRSF PIRSF011396 8 499 1.9E-179 T 13-10-2018 IPR033856 Flavin-dependent tryptophan halogenase BEN78_04115 4fa341755fffb4413d6eb38e3f08ca50 509 SUPERFAMILY SSF51905 12 411 3.67E-25 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN78_04115 4fa341755fffb4413d6eb38e3f08ca50 509 Pfam PF04820 Tryptophan halogenase 13 461 2.1E-186 T 13-10-2018 IPR006905 Flavin-dependent halogenase BEN78_15665 3375e01ac7e98e1f58b166ce757d8c96 166 Pfam PF04306 Protein of unknown function (DUF456) 23 163 1.8E-32 T 13-10-2018 IPR007403 Protein of unknown function DUF456 BEN78_07620 ed0696549f58afe077c09dfb755fa6c0 108 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 96 7.2E-18 T 13-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family BEN78_07620 ed0696549f58afe077c09dfb755fa6c0 108 Gene3D G3DSA:3.30.2310.20 1 101 1.4E-21 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily BEN78_09940 473f0795c5ad016557b085fc2a40fea8 201 Pfam PF05137 Fimbrial assembly protein (PilN) 100 177 8.2E-26 T 13-10-2018 IPR007813 Fimbrial assembly PilN BEN78_04685 5e49c2143f44a1ea1bdd93c0894760fc 335 Pfam PF16401 Domain of unknown function (DUF5009) 11 87 1.4E-6 T 13-10-2018 IPR032176 Domain of unknown function DUF5009 BEN78_13960 6cdfed2edb81ddc5d9bcca96174f66f2 623 Pfam PF07715 TonB-dependent Receptor Plug Domain 41 146 2.0E-28 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_13960 6cdfed2edb81ddc5d9bcca96174f66f2 623 SUPERFAMILY SSF56935 27 618 5.49E-113 T 13-10-2018 BEN78_13960 6cdfed2edb81ddc5d9bcca96174f66f2 623 Pfam PF00593 TonB dependent receptor 237 618 4.7E-46 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_13960 6cdfed2edb81ddc5d9bcca96174f66f2 623 Gene3D G3DSA:2.40.170.20 155 619 2.2E-110 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_13960 6cdfed2edb81ddc5d9bcca96174f66f2 623 Gene3D G3DSA:2.170.130.10 26 151 3.2E-34 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_13960 6cdfed2edb81ddc5d9bcca96174f66f2 623 TIGRFAM TIGR01779 TonB-B12: TonB-dependent vitamin B12 receptor 6 619 1.8E-185 T 13-10-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0015420|GO:0015889|GO:0016020 BEN78_08065 2c310e049e5e131d90febe507e51bc77 261 Pfam PF12412 Protein of unknown function (DUF3667) 64 103 3.2E-13 T 13-10-2018 IPR022134 Protein of unknown function DUF3667 BEN78_06885 df2bd69bfd86eba049b59eec05775bff 588 Pfam PF13205 Bacterial Ig-like domain 200 299 8.3E-9 T 13-10-2018 IPR032812 SbsA, Ig-like domain BEN78_06885 df2bd69bfd86eba049b59eec05775bff 588 Pfam PF04231 Endonuclease I 320 569 9.2E-34 T 13-10-2018 IPR007346 Endonuclease I GO:0004518 BEN78_06885 df2bd69bfd86eba049b59eec05775bff 588 SUPERFAMILY SSF54060 315 569 2.71E-39 T 13-10-2018 BEN78_15800 643141f5eadebe669758f34e59b7abfc 147 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.406 T 13-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 BEN78_15800 643141f5eadebe669758f34e59b7abfc 147 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 13-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 BEN78_15800 643141f5eadebe669758f34e59b7abfc 147 Gene3D G3DSA:3.30.70.60 1 92 1.3E-29 T 13-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 BEN78_15800 643141f5eadebe669758f34e59b7abfc 147 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 5.3E-32 T 13-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_15800 643141f5eadebe669758f34e59b7abfc 147 SUPERFAMILY SSF54995 1 103 1.57E-34 T 13-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_15800 643141f5eadebe669758f34e59b7abfc 147 Pfam PF01250 Ribosomal protein S6 3 91 1.9E-24 T 13-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN78_13365 1910b0c170ea55ad885b20b7a4196190 740 SUPERFAMILY SSF51445 32 357 1.26E-81 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily BEN78_13365 1910b0c170ea55ad885b20b7a4196190 740 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 102 335 4.1E-36 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BEN78_13365 1910b0c170ea55ad885b20b7a4196190 740 Gene3D G3DSA:3.20.20.300 23 342 7.2E-95 T 13-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 BEN78_13365 1910b0c170ea55ad885b20b7a4196190 740 Gene3D G3DSA:2.60.40.10 625 739 3.2E-24 T 13-10-2018 IPR013783 Immunoglobulin-like fold BEN78_13365 1910b0c170ea55ad885b20b7a4196190 740 Gene3D G3DSA:3.40.50.1700 361 624 1.3E-69 T 13-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 BEN78_13365 1910b0c170ea55ad885b20b7a4196190 740 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 373 622 7.8E-57 T 13-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 BEN78_13365 1910b0c170ea55ad885b20b7a4196190 740 SMART SM01217 655 723 1.3E-17 T 13-10-2018 IPR026891 Fibronectin type III-like domain BEN78_13365 1910b0c170ea55ad885b20b7a4196190 740 PRINTS PR00133 Glycosyl hydrolase family 3 signature 194 210 6.5E-25 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BEN78_13365 1910b0c170ea55ad885b20b7a4196190 740 PRINTS PR00133 Glycosyl hydrolase family 3 signature 264 282 6.5E-25 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BEN78_13365 1910b0c170ea55ad885b20b7a4196190 740 PRINTS PR00133 Glycosyl hydrolase family 3 signature 163 179 6.5E-25 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BEN78_13365 1910b0c170ea55ad885b20b7a4196190 740 PRINTS PR00133 Glycosyl hydrolase family 3 signature 87 103 6.5E-25 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BEN78_13365 1910b0c170ea55ad885b20b7a4196190 740 PRINTS PR00133 Glycosyl hydrolase family 3 signature 117 136 6.5E-25 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BEN78_13365 1910b0c170ea55ad885b20b7a4196190 740 SUPERFAMILY SSF52279 373 625 3.92E-51 T 13-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 BEN78_13365 1910b0c170ea55ad885b20b7a4196190 740 Pfam PF14310 Fibronectin type III-like domain 656 722 2.6E-14 T 13-10-2018 IPR026891 Fibronectin type III-like domain BEN78_07930 e16a0384fb0f8fd106fb1e70ac6a83f9 231 Pfam PF02698 DUF218 domain 62 192 1.4E-19 T 13-10-2018 IPR003848 Domain of unknown function DUF218 BEN78_00160 23ec641e450a312915c4154f4e052849 463 Pfam PF00171 Aldehyde dehydrogenase family 3 454 1.7E-138 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BEN78_00160 23ec641e450a312915c4154f4e052849 463 Gene3D G3DSA:3.40.309.10 234 423 7.1E-149 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BEN78_00160 23ec641e450a312915c4154f4e052849 463 Gene3D G3DSA:3.40.605.10 8 449 7.1E-149 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BEN78_00160 23ec641e450a312915c4154f4e052849 463 SUPERFAMILY SSF53720 3 457 3.53E-141 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BEN78_07085 c9d1133c79b7675ad3a652351854f9cc 206 Pfam PF13462 Thioredoxin 42 191 9.2E-11 T 13-10-2018 IPR012336 Thioredoxin-like fold BEN78_07085 c9d1133c79b7675ad3a652351854f9cc 206 PIRSF PIRSF001488 2 205 5.2E-25 T 13-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL BEN78_07085 c9d1133c79b7675ad3a652351854f9cc 206 Gene3D G3DSA:3.40.30.10 18 205 1.4E-45 T 13-10-2018 BEN78_07085 c9d1133c79b7675ad3a652351854f9cc 206 SUPERFAMILY SSF52833 20 198 1.19E-30 T 13-10-2018 IPR036249 Thioredoxin-like superfamily BEN78_16050 c3208e1cc6807a57bd70f71937649e9e 707 Gene3D G3DSA:3.40.390.10 70 707 5.0E-226 T 13-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 BEN78_16050 c3208e1cc6807a57bd70f71937649e9e 707 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 511 523 3.3E-21 T 13-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BEN78_16050 c3208e1cc6807a57bd70f71937649e9e 707 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 532 548 3.3E-21 T 13-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BEN78_16050 c3208e1cc6807a57bd70f71937649e9e 707 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 493 505 3.3E-21 T 13-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BEN78_16050 c3208e1cc6807a57bd70f71937649e9e 707 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 605 616 3.3E-21 T 13-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BEN78_16050 c3208e1cc6807a57bd70f71937649e9e 707 Pfam PF05649 Peptidase family M13 75 449 1.5E-91 T 13-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 BEN78_16050 c3208e1cc6807a57bd70f71937649e9e 707 Gene3D G3DSA:1.10.1380.10 101 488 5.0E-226 T 13-10-2018 BEN78_16050 c3208e1cc6807a57bd70f71937649e9e 707 Pfam PF01431 Peptidase family M13 501 704 3.7E-66 T 13-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BEN78_16050 c3208e1cc6807a57bd70f71937649e9e 707 SUPERFAMILY SSF55486 61 707 9.16E-194 T 13-10-2018 BEN78_08265 737dc31101ca15f21ade47867f0ad5a1 151 Gene3D G3DSA:3.40.630.30 3 147 2.4E-19 T 13-10-2018 BEN78_08265 737dc31101ca15f21ade47867f0ad5a1 151 SUPERFAMILY SSF55729 8 133 1.03E-20 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN78_08265 737dc31101ca15f21ade47867f0ad5a1 151 Pfam PF13673 Acetyltransferase (GNAT) domain 44 135 2.1E-10 T 13-10-2018 IPR000182 GNAT domain BEN78_16630 945fdad32aa39414b9b81881554d0e76 109 Gene3D G3DSA:1.10.1270.10 9 108 4.7E-30 T 13-10-2018 IPR038116 TrpR-like superfamily BEN78_16630 945fdad32aa39414b9b81881554d0e76 109 Pfam PF01371 Trp repressor protein 16 97 6.1E-26 T 13-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 BEN78_16630 945fdad32aa39414b9b81881554d0e76 109 SUPERFAMILY SSF48295 14 98 4.97E-23 T 13-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 BEN78_16630 945fdad32aa39414b9b81881554d0e76 109 PIRSF PIRSF012508 6 106 8.6E-30 T 13-10-2018 IPR013368 TrpR homologue YerC/YecD BEN78_16630 945fdad32aa39414b9b81881554d0e76 109 TIGRFAM TIGR02531 yecD_yerC: TrpR homolog YerC/YecD 16 100 2.0E-18 T 13-10-2018 IPR013368 TrpR homologue YerC/YecD BEN78_12790 eb91443791f3b8eac4103d7a8e1d0f45 108 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 14 103 7.4E-24 T 13-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like BEN78_12790 eb91443791f3b8eac4103d7a8e1d0f45 108 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 9 108 20.448 T 13-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 BEN78_07940 aba877de66131c0cadc0c9fc06e6bc65 150 Pfam PF08695 Cytochrome oxidase complex assembly protein 1 22 136 1.2E-15 T 13-10-2018 IPR014807 Cytochrome oxidase assembly protein 1 BEN78_13845 d42daa4cf8eba531535cb4f239044c43 126 Pfam PF16137 Domain of unknown function (DUF4845) 29 113 4.0E-25 T 13-10-2018 IPR032314 Protein of unknown function DUF4845 BEN78_02650 1f9d3fe94648faea3ed28d40ba92ea5c 488 SUPERFAMILY SSF141072 264 399 4.84E-7 T 13-10-2018 IPR038081 CalX-like domain superfamily BEN78_06050 5047f4a349278a403396d1647fd20a1e 96 SUPERFAMILY SSF81301 4 96 4.0E-17 T 13-10-2018 BEN78_06050 5047f4a349278a403396d1647fd20a1e 96 Gene3D G3DSA:3.30.460.10 2 96 4.4E-18 T 13-10-2018 BEN78_06050 5047f4a349278a403396d1647fd20a1e 96 Pfam PF01909 Nucleotidyltransferase domain 23 92 1.5E-5 T 13-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 BEN78_08750 34fc4095d5026bb9412e5add00f530b1 131 Pfam PF04304 Protein of unknown function (DUF454) 8 127 2.1E-36 T 13-10-2018 IPR007401 Protein of unknown function DUF454 BEN78_08750 34fc4095d5026bb9412e5add00f530b1 131 PIRSF PIRSF016789 7 131 8.5E-31 T 13-10-2018 IPR007401 Protein of unknown function DUF454 BEN78_02810 6984c6b67c4236f9e76291a644e85e80 207 SUPERFAMILY SSF53474 8 205 7.6E-24 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_02810 6984c6b67c4236f9e76291a644e85e80 207 Pfam PF12697 Alpha/beta hydrolase family 8 142 6.2E-8 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN78_08570 ba3dd8e112e8693251b79475e5c04936 177 Pfam PF00719 Inorganic pyrophosphatase 18 174 8.0E-53 T 13-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 BEN78_08570 ba3dd8e112e8693251b79475e5c04936 177 SUPERFAMILY SSF50324 4 175 5.49E-67 T 13-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 BEN78_08570 ba3dd8e112e8693251b79475e5c04936 177 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 35.998 T 13-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 BEN78_08570 ba3dd8e112e8693251b79475e5c04936 177 Gene3D G3DSA:3.90.80.10 1 175 1.5E-69 T 13-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 BEN78_02300 d890ef5423468b17611f13c95ba4c4f4 752 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 38 752 8.5E-113 T 13-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 BEN78_02300 d890ef5423468b17611f13c95ba4c4f4 752 Gene3D G3DSA:2.170.130.10 37 166 4.1E-36 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BEN78_02300 d890ef5423468b17611f13c95ba4c4f4 752 Gene3D G3DSA:2.40.170.20 180 752 1.8E-111 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_02300 d890ef5423468b17611f13c95ba4c4f4 752 SUPERFAMILY SSF56935 29 752 8.24E-119 T 13-10-2018 BEN78_02300 d890ef5423468b17611f13c95ba4c4f4 752 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 38 752 2.5E-132 T 13-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 BEN78_02300 d890ef5423468b17611f13c95ba4c4f4 752 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 161 7.1E-24 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_02300 d890ef5423468b17611f13c95ba4c4f4 752 Pfam PF00593 TonB dependent receptor 260 749 4.1E-63 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_09400 52789ed731196ae3ec8ff19aa7d81e2f 283 ProDom PD046566 PATHWAY N GENERAL SECRETION PRECURSOR SIGNAL MEMBRANE XPSN TRANSMEMBRANE INNER 1 165 5.0E-16 T 13-10-2018 BEN78_09350 62b0f1ebe59e4ebba7abb67194f16d9d 102 Pfam PF11804 Protein of unknown function (DUF3325) 7 91 2.7E-22 T 13-10-2018 IPR021762 Protein of unknown function DUF3325 BEN78_02325 898f633729f0dbbe7062497fce3324a5 140 Pfam PF16233 Domain of unknown function (DUF4893) 19 126 3.2E-16 T 13-10-2018 IPR032609 Protein of unknown function DUF4893 BEN78_15300 5aa9f2930a09df66dcda16fe92d6b15e 210 SUPERFAMILY SSF48452 61 180 1.92E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_15300 5aa9f2930a09df66dcda16fe92d6b15e 210 Gene3D G3DSA:1.25.40.10 33 204 1.1E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN78_15300 5aa9f2930a09df66dcda16fe92d6b15e 210 Pfam PF09976 Tetratricopeptide repeat-like domain 17 200 2.8E-34 T 13-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 BEN78_08095 58516d6fb761659e0e010b002b70b34e 465 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 6 435 1.7E-156 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 BEN78_08095 58516d6fb761659e0e010b002b70b34e 465 PIRSF PIRSF006446 1 457 7.2E-186 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 BEN78_11830 0dc9f1b74d5d2baeff1e60db229a1e7a 208 Gene3D G3DSA:1.20.58.220 14 208 5.7E-34 T 13-10-2018 IPR038078 PhoU-like domain superfamily BEN78_11830 0dc9f1b74d5d2baeff1e60db229a1e7a 208 Pfam PF01865 Protein of unknown function DUF47 60 197 2.6E-6 T 13-10-2018 IPR018445 Putative phosphate transport regulator BEN78_03800 05a2ea40d406d26a417c65460d14a376 137 Pfam PF10825 Protein of unknown function (DUF2752) 38 81 3.3E-18 T 13-10-2018 IPR021215 Protein of unknown function DUF2752 BEN78_08810 2efe6ce517ed1042ccf6d8c658b0360f 211 SUPERFAMILY SSF52540 2 153 3.35E-10 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_08810 2efe6ce517ed1042ccf6d8c658b0360f 211 Gene3D G3DSA:3.40.50.300 1 173 1.8E-13 T 13-10-2018 BEN78_13665 fcb07e76b1ba156b1bf72786a7e6fd56 469 SUPERFAMILY SSF51338 37 462 2.56E-15 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BEN78_13665 fcb07e76b1ba156b1bf72786a7e6fd56 469 Gene3D G3DSA:2.30.40.10 32 102 4.8E-5 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BEN78_13665 fcb07e76b1ba156b1bf72786a7e6fd56 469 Gene3D G3DSA:3.20.20.140 103 421 1.3E-57 T 13-10-2018 BEN78_13665 fcb07e76b1ba156b1bf72786a7e6fd56 469 Pfam PF01979 Amidohydrolase family 93 458 4.1E-18 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BEN78_13665 fcb07e76b1ba156b1bf72786a7e6fd56 469 SUPERFAMILY SSF51556 96 421 1.09E-45 T 13-10-2018 IPR032466 Metal-dependent hydrolase BEN78_02750 aaf646c734310e4fb2ae6829dab43e61 215 SUPERFAMILY SSF102114 10 193 6.8E-28 T 13-10-2018 BEN78_02750 aaf646c734310e4fb2ae6829dab43e61 215 Pfam PF04055 Radical SAM superfamily 17 148 9.8E-14 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BEN78_02750 aaf646c734310e4fb2ae6829dab43e61 215 Gene3D G3DSA:3.20.20.70 1 191 1.1E-33 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_02750 aaf646c734310e4fb2ae6829dab43e61 215 Pfam PF13353 4Fe-4S single cluster domain 13 87 1.1E-8 T 13-10-2018 BEN78_02750 aaf646c734310e4fb2ae6829dab43e61 215 TIGRFAM TIGR02495 NrdG2: anaerobic ribonucleoside-triphosphate reductase activating protein 2 185 2.6E-55 T 13-10-2018 IPR012840 Anaerobic ribonucleoside-triphosphate reductase activating protein BEN78_05385 e9efa41a50c5faa5f229e7b026c0d2ab 264 Pfam PF01614 Bacterial transcriptional regulator 137 257 1.9E-21 T 13-10-2018 IPR014757 Transcription regulator IclR, C-terminal BEN78_05385 e9efa41a50c5faa5f229e7b026c0d2ab 264 Pfam PF09339 IclR helix-turn-helix domain 22 69 2.5E-14 T 13-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 BEN78_05385 e9efa41a50c5faa5f229e7b026c0d2ab 264 Gene3D G3DSA:3.30.450.40 90 264 1.6E-43 T 13-10-2018 IPR029016 GAF-like domain superfamily BEN78_05385 e9efa41a50c5faa5f229e7b026c0d2ab 264 SUPERFAMILY SSF46785 19 88 2.55E-14 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN78_05385 e9efa41a50c5faa5f229e7b026c0d2ab 264 SUPERFAMILY SSF55781 81 261 2.09E-43 T 13-10-2018 BEN78_05385 e9efa41a50c5faa5f229e7b026c0d2ab 264 SMART SM00346 17 106 3.4E-18 T 13-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 BEN78_05385 e9efa41a50c5faa5f229e7b026c0d2ab 264 Gene3D G3DSA:1.10.10.10 16 89 1.6E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_03795 9a39a80cbc020c79af1a1450c73f0f7d 108 Pfam PF04505 Interferon-induced transmembrane protein 12 82 1.8E-18 T 13-10-2018 IPR007593 CD225/Dispanin family GO:0016021 BEN78_03425 85dc3a73c704343757e5c058c318f2fc 250 Pfam PF01925 Sulfite exporter TauE/SafE 11 241 4.3E-35 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 BEN78_10750 a4e05f4dff505779420019d696050017 259 Pfam PF01435 Peptidase family M48 102 256 9.1E-26 T 13-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 BEN78_10750 a4e05f4dff505779420019d696050017 259 Gene3D G3DSA:3.30.2010.10 75 158 5.4E-10 T 13-10-2018 BEN78_15470 46a25b1b392e38f5fc136e0f9e08111b 595 Pfam PF03781 Sulfatase-modifying factor enzyme 1 321 593 1.3E-63 T 13-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 BEN78_15470 46a25b1b392e38f5fc136e0f9e08111b 595 SUPERFAMILY SSF56436 320 595 6.59E-67 T 13-10-2018 IPR016187 C-type lectin fold BEN78_15470 46a25b1b392e38f5fc136e0f9e08111b 595 Gene3D G3DSA:3.90.1580.10 312 595 8.8E-68 T 13-10-2018 BEN78_09240 25b10830422571c324442984ab5a9f3a 384 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 13 148 4.9E-22 T 13-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN78_09240 25b10830422571c324442984ab5a9f3a 384 SUPERFAMILY SSF53756 13 368 6.81E-79 T 13-10-2018 BEN78_09240 25b10830422571c324442984ab5a9f3a 384 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 194 360 1.6E-28 T 13-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 BEN78_09240 25b10830422571c324442984ab5a9f3a 384 Gene3D G3DSA:3.40.50.2000 16 359 4.7E-78 T 13-10-2018 BEN78_09240 25b10830422571c324442984ab5a9f3a 384 Gene3D G3DSA:3.40.50.2000 172 353 4.7E-78 T 13-10-2018 BEN78_09240 25b10830422571c324442984ab5a9f3a 384 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 13 369 27.255 T 13-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN78_16800 11247f59a6d9b55388e91c88419ae0c9 444 Pfam PF05559 Protein of unknown function (DUF763) 6 360 6.6E-123 T 13-10-2018 IPR008482 Protein of unknown function DUF763 BEN78_05030 c06e4ff779c768cfcbd5e8d6fb19fd03 195 SUPERFAMILY SSF55729 32 192 1.37E-18 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN78_05030 c06e4ff779c768cfcbd5e8d6fb19fd03 195 Pfam PF00583 Acetyltransferase (GNAT) family 42 173 1.5E-10 T 13-10-2018 IPR000182 GNAT domain BEN78_12650 855a756f2d3e7a546bd0b83d25f8e96a 317 Gene3D G3DSA:1.10.8.10 8 97 5.4E-7 T 13-10-2018 BEN78_12650 855a756f2d3e7a546bd0b83d25f8e96a 317 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 196 202 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BEN78_12650 855a756f2d3e7a546bd0b83d25f8e96a 317 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 5 286 1.8E-112 T 13-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 BEN78_12650 855a756f2d3e7a546bd0b83d25f8e96a 317 PIRSF PIRSF037167 1 299 1.5E-118 T 13-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 BEN78_12650 855a756f2d3e7a546bd0b83d25f8e96a 317 Pfam PF05175 Methyltransferase small domain 126 209 4.3E-16 T 13-10-2018 IPR007848 Methyltransferase small domain GO:0008168 BEN78_12650 855a756f2d3e7a546bd0b83d25f8e96a 317 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 6 293 4.8E-67 T 13-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 BEN78_12650 855a756f2d3e7a546bd0b83d25f8e96a 317 Gene3D G3DSA:3.40.50.150 101 273 3.9E-42 T 13-10-2018 BEN78_12650 855a756f2d3e7a546bd0b83d25f8e96a 317 SUPERFAMILY SSF53335 8 285 1.63E-47 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_08235 a7261a0f05fe3547c3e321baf8986553 183 Pfam PF11655 Protein of unknown function (DUF2589) 7 162 1.3E-26 T 13-10-2018 IPR024510 Protein of unknown function DUF2589 BEN78_15985 5a7574720d372de0710da92a1330897a 95 Gene3D G3DSA:2.30.30.720 1 95 6.9E-30 T 13-10-2018 BEN78_15985 5a7574720d372de0710da92a1330897a 95 Pfam PF11607 Protein of unknown function (DUF3247) 1 91 5.5E-26 T 13-10-2018 IPR021649 Protein of unknown function DUF3247 BEN78_08315 6b21410a6667bcf25152cec0fe532ca1 328 Pfam PF06258 Mitochondrial fission ELM1 26 327 5.5E-80 T 13-10-2018 IPR009367 Mitochondrial fission protein ELM1-like BEN78_01705 81d94a6cbc3089bbb29162653cb80cdf 222 Pfam PF14279 HNH endonuclease 127 181 2.3E-14 T 13-10-2018 IPR029471 HNH endonuclease 5 BEN78_01705 81d94a6cbc3089bbb29162653cb80cdf 222 SMART SM00507 114 167 6.7E-8 T 13-10-2018 IPR003615 HNH nuclease BEN78_01705 81d94a6cbc3089bbb29162653cb80cdf 222 Gene3D G3DSA:3.30.40.60 99 199 1.4E-20 T 13-10-2018 BEN78_00620 6d495f7176e555179bc4a95816919b23 181 Pfam PF13420 Acetyltransferase (GNAT) domain 10 164 9.6E-27 T 13-10-2018 BEN78_00620 6d495f7176e555179bc4a95816919b23 181 Gene3D G3DSA:3.40.630.30 5 180 9.9E-52 T 13-10-2018 BEN78_00620 6d495f7176e555179bc4a95816919b23 181 SUPERFAMILY SSF55729 10 172 1.08E-32 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN78_06145 d1cc455a16e2e88219847dc5c67b1792 255 Gene3D G3DSA:3.10.450.50 209 251 1.1E-7 T 13-10-2018 BEN78_06145 d1cc455a16e2e88219847dc5c67b1792 255 Pfam PF03695 Uncharacterised protein family (UPF0149) 13 213 3.3E-16 T 13-10-2018 IPR011978 Uncharacterised protein family UPF0149 BEN78_06145 d1cc455a16e2e88219847dc5c67b1792 255 SUPERFAMILY SSF101327 12 199 2.22E-11 T 13-10-2018 IPR036255 YgfB-like superfamily BEN78_06145 d1cc455a16e2e88219847dc5c67b1792 255 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 11 95 1.9E-12 T 13-10-2018 IPR011978 Uncharacterised protein family UPF0149 BEN78_06145 d1cc455a16e2e88219847dc5c67b1792 255 Pfam PF02810 SEC-C motif 233 250 1.6E-8 T 13-10-2018 IPR004027 SEC-C motif BEN78_06145 d1cc455a16e2e88219847dc5c67b1792 255 SUPERFAMILY SSF103642 231 251 2.94E-7 T 13-10-2018 BEN78_00305 30ed82bafe4d9bc9111ab12a701f4cb2 194 Pfam PF09335 SNARE associated Golgi protein 38 156 4.3E-13 T 13-10-2018 IPR032816 SNARE associated Golgi protein BEN78_09130 3149f2d8925a7badb21be09216944d26 394 Pfam PF07995 Glucose / Sorbosone dehydrogenase 63 388 2.2E-135 T 13-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase BEN78_09130 3149f2d8925a7badb21be09216944d26 394 Gene3D G3DSA:2.120.10.30 55 392 4.0E-114 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BEN78_09130 3149f2d8925a7badb21be09216944d26 394 SUPERFAMILY SSF50952 61 392 3.27E-52 T 13-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 BEN78_13860 f5cd933e78e24974c2836681bd386c7b 135 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 23 108 6.6E-14 T 13-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 BEN78_13860 f5cd933e78e24974c2836681bd386c7b 135 Gene3D G3DSA:2.170.150.70 1 112 5.1E-14 T 13-10-2018 BEN78_13860 f5cd933e78e24974c2836681bd386c7b 135 SUPERFAMILY SSF51316 1 119 1.36E-32 T 13-10-2018 IPR011057 Mss4-like superfamily BEN78_11820 a7c9d18080ae72db80ce1993b9c401f0 212 Pfam PF06055 Exopolysaccharide synthesis, ExoD 17 194 2.6E-47 T 13-10-2018 IPR010331 Exopolysaccharide synthesis, ExoD BEN78_11820 a7c9d18080ae72db80ce1993b9c401f0 212 PIRSF PIRSF033239 5 209 1.9E-45 T 13-10-2018 IPR010331 Exopolysaccharide synthesis, ExoD BEN78_04265 df95f837be61efdbe791bdfaf5f868a8 211 Pfam PF13645 L,D-transpeptidase catalytic domain 27 193 1.9E-61 T 13-10-2018 IPR032676 Putative L,D-transpeptidase tautomerase BEN78_06985 e4bd7c7c9f478cf38702df162564fcaf 221 Pfam PF05494 MlaC protein 50 211 1.3E-39 T 13-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC BEN78_06985 e4bd7c7c9f478cf38702df162564fcaf 221 PIRSF PIRSF004649 8 221 1.4E-48 T 13-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC BEN78_06985 e4bd7c7c9f478cf38702df162564fcaf 221 Gene3D G3DSA:3.10.450.710 39 216 5.2E-39 T 13-10-2018 BEN78_05830 6ebffca8277f45092e311508ec658439 142 SUPERFAMILY SSF55729 4 135 1.69E-26 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN78_05830 6ebffca8277f45092e311508ec658439 142 Gene3D G3DSA:3.40.630.30 36 135 1.4E-25 T 13-10-2018 BEN78_05830 6ebffca8277f45092e311508ec658439 142 Pfam PF00583 Acetyltransferase (GNAT) family 36 113 2.3E-12 T 13-10-2018 IPR000182 GNAT domain BEN78_07095 13dcf0cb4048e9245d1ca125950fac51 209 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 12 199 26.59 T 13-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 BEN78_07095 13dcf0cb4048e9245d1ca125950fac51 209 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 9 195 9.5E-67 T 13-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 BEN78_07095 13dcf0cb4048e9245d1ca125950fac51 209 Gene3D G3DSA:3.40.50.300 2 202 1.3E-49 T 13-10-2018 BEN78_07095 13dcf0cb4048e9245d1ca125950fac51 209 SUPERFAMILY SSF52540 19 200 1.3E-33 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_07095 13dcf0cb4048e9245d1ca125950fac51 209 Pfam PF01926 50S ribosome-binding GTPase 27 146 2.2E-18 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 BEN78_07845 826f3b64e0a3dd95945476178a355a5e 343 Gene3D G3DSA:3.30.1330.40 220 341 8.1E-13 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BEN78_07845 826f3b64e0a3dd95945476178a355a5e 343 SUPERFAMILY SSF55298 239 338 2.36E-8 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BEN78_00240 bb11fa318ca84e6b56ca18160bfe47fe 63 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 4 59 9.4E-17 T 13-10-2018 IPR019201 Protein of unknown function DUF2065 BEN78_03900 ad4295e166d67f4c4092f4d35ca28fda 226 Gene3D G3DSA:3.40.50.1820 10 225 2.4E-63 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_03900 ad4295e166d67f4c4092f4d35ca28fda 226 SUPERFAMILY SSF53474 14 223 2.72E-50 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_03900 ad4295e166d67f4c4092f4d35ca28fda 226 Pfam PF02230 Phospholipase/Carboxylesterase 22 221 1.6E-46 T 13-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 BEN78_06610 bc5990cc78caa4bcce4268a017ac7d40 245 SMART SM00248 142 171 38.0 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 BEN78_06610 bc5990cc78caa4bcce4268a017ac7d40 245 SMART SM00248 42 71 250.0 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 BEN78_06610 bc5990cc78caa4bcce4268a017ac7d40 245 SMART SM00248 108 137 0.43 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 BEN78_06610 bc5990cc78caa4bcce4268a017ac7d40 245 SMART SM00248 175 204 0.71 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 BEN78_06610 bc5990cc78caa4bcce4268a017ac7d40 245 SMART SM00248 75 104 1.2 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 BEN78_06610 bc5990cc78caa4bcce4268a017ac7d40 245 Pfam PF13857 Ankyrin repeats (many copies) 162 212 3.3E-7 T 13-10-2018 BEN78_06610 bc5990cc78caa4bcce4268a017ac7d40 245 Gene3D G3DSA:1.25.40.20 15 219 1.7E-43 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily BEN78_06610 bc5990cc78caa4bcce4268a017ac7d40 245 Pfam PF12796 Ankyrin repeats (3 copies) 49 136 2.6E-11 T 13-10-2018 IPR020683 Ankyrin repeat-containing domain BEN78_06610 bc5990cc78caa4bcce4268a017ac7d40 245 SUPERFAMILY SSF48403 47 214 3.08E-38 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily BEN78_09515 ff3ec5c2a7e2011b44ad9e25ec797958 257 SUPERFAMILY SSF53474 17 253 2.49E-29 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_09515 ff3ec5c2a7e2011b44ad9e25ec797958 257 Gene3D G3DSA:3.40.50.1820 12 253 7.8E-26 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_09515 ff3ec5c2a7e2011b44ad9e25ec797958 257 Pfam PF12146 Serine aminopeptidase, S33 44 152 2.2E-7 T 13-10-2018 IPR022742 Serine aminopeptidase, S33 BEN78_00640 b4d62a83c5323723c6f7ace13daddd7a 374 Gene3D G3DSA:2.40.420.20 53 352 7.7E-70 T 13-10-2018 BEN78_00640 b4d62a83c5323723c6f7ace13daddd7a 374 SUPERFAMILY SSF111369 70 279 3.4E-35 T 13-10-2018 BEN78_00640 b4d62a83c5323723c6f7ace13daddd7a 374 Gene3D G3DSA:1.10.287.470 108 167 7.7E-70 T 13-10-2018 BEN78_00640 b4d62a83c5323723c6f7ace13daddd7a 374 Gene3D G3DSA:2.40.30.170 59 281 7.7E-70 T 13-10-2018 BEN78_00640 b4d62a83c5323723c6f7ace13daddd7a 374 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 50 354 6.9E-82 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BEN78_00640 b4d62a83c5323723c6f7ace13daddd7a 374 Gene3D G3DSA:2.40.50.100 74 206 7.7E-70 T 13-10-2018 BEN78_00640 b4d62a83c5323723c6f7ace13daddd7a 374 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 64 273 1.2E-24 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BEN78_02550 abed253c88b7d72eb1e2330edd4eecd0 450 Pfam PF13163 Protein of unknown function (DUF3999) 24 443 1.8E-107 T 13-10-2018 IPR025060 Protein of unknown function DUF3999 BEN78_02550 abed253c88b7d72eb1e2330edd4eecd0 450 SUPERFAMILY SSF49785 156 217 3.4E-5 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily BEN78_07890 c8d2c13354493cf215dbae90d4525444 144 SUPERFAMILY SSF54637 4 141 3.91E-10 T 13-10-2018 IPR029069 HotDog domain superfamily BEN78_07890 c8d2c13354493cf215dbae90d4525444 144 Gene3D G3DSA:3.10.129.10 1 143 4.4E-9 T 13-10-2018 BEN78_05755 07a38cb27d304d7a01eb4b516d90f544 448 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 22 448 2.2E-101 T 13-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) BEN78_05755 07a38cb27d304d7a01eb4b516d90f544 448 Gene3D G3DSA:2.40.160.60 30 448 1.2E-126 T 13-10-2018 BEN78_05755 07a38cb27d304d7a01eb4b516d90f544 448 SUPERFAMILY SSF56935 30 448 7.32E-87 T 13-10-2018 BEN78_03990 9ff787e6c4c15f5715a144f6a7694c7e 434 Pfam PF02687 FtsX-like permease family 338 425 1.3E-12 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BEN78_03990 9ff787e6c4c15f5715a144f6a7694c7e 434 Pfam PF12704 MacB-like periplasmic core domain 20 269 1.6E-22 T 13-10-2018 IPR025857 MacB-like periplasmic core domain BEN78_02980 5b5aa009ff9a6c669ea75c842ae378e6 516 Pfam PF03703 Bacterial PH domain 426 502 9.7E-12 T 13-10-2018 IPR005182 Domain of unknown function DUF304 BEN78_02980 5b5aa009ff9a6c669ea75c842ae378e6 516 Pfam PF03703 Bacterial PH domain 271 332 6.3E-11 T 13-10-2018 IPR005182 Domain of unknown function DUF304 BEN78_02980 5b5aa009ff9a6c669ea75c842ae378e6 516 Pfam PF03703 Bacterial PH domain 78 155 3.4E-21 T 13-10-2018 IPR005182 Domain of unknown function DUF304 BEN78_02980 5b5aa009ff9a6c669ea75c842ae378e6 516 PIRSF PIRSF026631 18 516 3.8E-96 T 13-10-2018 IPR014529 Uncharacterised conserved protein UCP026631 BEN78_15830 8007e6056fdfe6c488edc351cfadcee9 247 Pfam PF02104 SURF1 family 23 227 2.5E-38 T 13-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_13410 0293dc4b36cc164396cf09b1644fd136 169 Gene3D G3DSA:3.30.70.2060 52 110 7.7E-9 T 13-10-2018 BEN78_13410 0293dc4b36cc164396cf09b1644fd136 169 Gene3D G3DSA:3.30.70.2050 111 164 3.3E-10 T 13-10-2018 BEN78_13410 0293dc4b36cc164396cf09b1644fd136 169 Pfam PF05573 NosL 17 157 3.7E-45 T 13-10-2018 IPR008719 Nitrous oxide reductase accessory protein NosL BEN78_13410 0293dc4b36cc164396cf09b1644fd136 169 SUPERFAMILY SSF160387 54 168 2.28E-32 T 13-10-2018 BEN78_15485 afc381689e8a44f9c3e658fc8b22bd4a 58 Pfam PF12244 Protein of unknown function (DUF3606) 4 57 1.0E-24 T 13-10-2018 IPR022037 Protein of unknown function DUF3606 BEN78_01515 78f75ff63efabaf3cc7d03b37dbfb18b 224 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 22 177 1.7E-16 T 13-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system BEN78_15950 0a6f06f39431947dbc94ac23c1f45866 715 Gene3D G3DSA:2.40.10.10 626 691 7.6E-7 T 13-10-2018 BEN78_15950 0a6f06f39431947dbc94ac23c1f45866 715 Pfam PF10459 Peptidase S46 23 711 2.9E-217 T 13-10-2018 IPR019500 Peptidase S46 GO:0008239|GO:0070009 BEN78_15950 0a6f06f39431947dbc94ac23c1f45866 715 SUPERFAMILY SSF50494 46 698 6.65E-25 T 13-10-2018 IPR009003 Peptidase S1, PA clan BEN78_04915 d0d755e741b34d635b6bda48920b1d94 491 SMART SM00267 316 489 1.8E-41 T 13-10-2018 IPR000160 GGDEF domain BEN78_04915 d0d755e741b34d635b6bda48920b1d94 491 SUPERFAMILY SSF55073 335 487 1.8E-41 T 13-10-2018 IPR029787 Nucleotide cyclase BEN78_04915 d0d755e741b34d635b6bda48920b1d94 491 Pfam PF00990 Diguanylate cyclase, GGDEF domain 332 485 2.8E-35 T 13-10-2018 IPR000160 GGDEF domain BEN78_04915 d0d755e741b34d635b6bda48920b1d94 491 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 330 488 4.9E-39 T 13-10-2018 IPR000160 GGDEF domain BEN78_04915 d0d755e741b34d635b6bda48920b1d94 491 Gene3D G3DSA:3.30.70.270 329 491 8.8E-48 T 13-10-2018 BEN78_04730 dcfed14ec74ad96dd8b15c7f0d1ea43b 393 SUPERFAMILY SSF53335 22 378 2.32E-83 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN78_04730 dcfed14ec74ad96dd8b15c7f0d1ea43b 393 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 77 320 4.2E-46 T 13-10-2018 IPR003788 Protein arginine methyltransferase NDUFAF7 Reactome: R-HSA-6799198 BEN78_04730 dcfed14ec74ad96dd8b15c7f0d1ea43b 393 Gene3D G3DSA:3.40.50.12710 2 393 2.5E-110 T 13-10-2018 IPR038375 Protein arginine methyltransferase NDUFAF7 superfamily Reactome: R-HSA-6799198 BEN78_11655 b12742d9032f5dc260d6341ea4d894bd 339 Gene3D G3DSA:3.30.565.10 202 337 2.9E-14 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_11655 b12742d9032f5dc260d6341ea4d894bd 339 Pfam PF06580 Histidine kinase 149 226 1.4E-22 T 13-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 BEN78_11655 b12742d9032f5dc260d6341ea4d894bd 339 SUPERFAMILY SSF55874 202 336 1.46E-12 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_02790 eb9251469e8574af90540df309ce494b 618 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 1 618 33.286 T 13-10-2018 IPR023051 Potassium uptake protein, low affinity, Kup BEN78_02790 eb9251469e8574af90540df309ce494b 618 Pfam PF02705 K+ potassium transporter 7 538 2.5E-210 T 13-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 BEN78_13675 2ed68795b40bb93bc6766b1be3d5890a 364 Pfam PF02574 Homocysteine S-methyltransferase 21 348 8.8E-79 T 13-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 BEN78_13675 2ed68795b40bb93bc6766b1be3d5890a 364 Gene3D G3DSA:3.20.20.330 7 362 3.4E-122 T 13-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 BEN78_13675 2ed68795b40bb93bc6766b1be3d5890a 364 PIRSF PIRSF037505 79 359 1.0E-7 T 13-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 BEN78_13675 2ed68795b40bb93bc6766b1be3d5890a 364 SUPERFAMILY SSF82282 12 357 4.19E-98 T 13-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 BEN78_10510 807e5a3d34016b166fae2c6cf683c2c5 471 SUPERFAMILY SSF56601 87 425 4.1E-78 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BEN78_10510 807e5a3d34016b166fae2c6cf683c2c5 471 Pfam PF00144 Beta-lactamase 87 416 1.3E-68 T 13-10-2018 IPR001466 Beta-lactamase-related BEN78_10510 807e5a3d34016b166fae2c6cf683c2c5 471 Gene3D G3DSA:3.40.710.10 87 426 1.3E-81 T 13-10-2018 BEN78_13155 96e3eca5d941bd3a0cc8cd9d5df6ef82 114 Pfam PF00072 Response regulator receiver domain 6 85 3.8E-7 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_13155 96e3eca5d941bd3a0cc8cd9d5df6ef82 114 SUPERFAMILY SSF52172 1 110 5.69E-17 T 13-10-2018 IPR011006 CheY-like superfamily BEN78_13155 96e3eca5d941bd3a0cc8cd9d5df6ef82 114 SMART SM00448 4 112 2.2E-5 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN78_13155 96e3eca5d941bd3a0cc8cd9d5df6ef82 114 Gene3D G3DSA:3.40.50.2300 1 113 2.7E-33 T 13-10-2018 BEN78_09650 8fe7616ae28930fa3befdbe8ff040eed 263 Gene3D G3DSA:3.30.1450.10 64 145 2.1E-9 T 13-10-2018 IPR037873 BamE-like BEN78_09650 8fe7616ae28930fa3befdbe8ff040eed 263 Pfam PF04355 SmpA / OmlA family 65 134 5.2E-11 T 13-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 BEN78_06415 447acd7cbe3042fc5151693edada8042 268 Gene3D G3DSA:3.30.2010.10 54 141 6.4E-7 T 13-10-2018 BEN78_06415 447acd7cbe3042fc5151693edada8042 268 Pfam PF01435 Peptidase family M48 59 247 2.8E-38 T 13-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 BEN78_07080 68bce2ad5cd2cf888f9b342e48c3c177 268 SUPERFAMILY SSF52833 83 260 2.09E-36 T 13-10-2018 IPR036249 Thioredoxin-like superfamily BEN78_07080 68bce2ad5cd2cf888f9b342e48c3c177 268 Pfam PF13462 Thioredoxin 105 255 1.2E-8 T 13-10-2018 IPR012336 Thioredoxin-like fold BEN78_07080 68bce2ad5cd2cf888f9b342e48c3c177 268 Gene3D G3DSA:3.40.30.10 82 268 5.7E-46 T 13-10-2018 BEN78_07080 68bce2ad5cd2cf888f9b342e48c3c177 268 ProSitePatterns PS00194 Thioredoxin family active site. 108 126 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 BEN78_05380 1e06dcae6232029f01f437e1e8f30e47 223 SUPERFAMILY SSF51182 104 186 6.36E-6 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily BEN78_13750 f67c1820ef3b9b19416e787a59f0dd89 182 Pfam PF04519 Polymer-forming cytoskeletal 60 156 4.1E-23 T 13-10-2018 IPR007607 Bactofilin A/B BEN78_00520 969219ad07396dad38212fe6b89b05ae 183 Pfam PF05229 Spore Coat Protein U domain 33 180 4.1E-28 T 13-10-2018 IPR007893 Spore coat protein U BEN78_00520 969219ad07396dad38212fe6b89b05ae 183 SMART SM00972 122 180 1.8E-14 T 13-10-2018 IPR007893 Spore coat protein U BEN78_16060 e3e847d8f08da8cbb9291c9d18d2b6d9 452 Pfam PF00722 Glycosyl hydrolases family 16 66 272 4.4E-25 T 13-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 BEN78_16060 e3e847d8f08da8cbb9291c9d18d2b6d9 452 Gene3D G3DSA:2.60.120.200 23 278 2.5E-70 T 13-10-2018 BEN78_16060 e3e847d8f08da8cbb9291c9d18d2b6d9 452 Gene3D G3DSA:2.60.120.430 320 449 1.1E-8 T 13-10-2018 BEN78_16060 e3e847d8f08da8cbb9291c9d18d2b6d9 452 SUPERFAMILY SSF49899 22 275 8.8E-64 T 13-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily BEN78_03840 b20c05c40991483092a4ce2c5757ce35 69 Pfam PF04324 BFD-like [2Fe-2S] binding domain 3 51 5.6E-12 T 13-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain BEN78_03840 b20c05c40991483092a4ce2c5757ce35 69 Gene3D G3DSA:1.10.10.1100 1 55 1.9E-18 T 13-10-2018 BEN78_06545 39ce2955806c32cb4f1c55babd6b8ac7 138 Pfam PF14534 Domain of unknown function (DUF4440) 8 108 6.9E-9 T 13-10-2018 IPR027843 Domain of unknown function DUF4440 BEN78_06545 39ce2955806c32cb4f1c55babd6b8ac7 138 SUPERFAMILY SSF54427 6 119 7.21E-19 T 13-10-2018 IPR032710 NTF2-like domain superfamily BEN78_06545 39ce2955806c32cb4f1c55babd6b8ac7 138 Gene3D G3DSA:3.10.450.50 5 122 6.7E-20 T 13-10-2018 BEN78_09120 0f76b64f9a5c80a0cc9e1d08891397bf 172 Pfam PF00156 Phosphoribosyl transferase domain 30 150 9.7E-20 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 BEN78_09120 0f76b64f9a5c80a0cc9e1d08891397bf 172 Gene3D G3DSA:3.40.50.2020 1 170 2.9E-60 T 13-10-2018 BEN78_09120 0f76b64f9a5c80a0cc9e1d08891397bf 172 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 4 172 33.589 T 13-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 BEN78_09120 0f76b64f9a5c80a0cc9e1d08891397bf 172 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 7 165 3.6E-60 T 13-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 BEN78_09120 0f76b64f9a5c80a0cc9e1d08891397bf 172 SUPERFAMILY SSF53271 6 164 6.42E-49 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like BEN78_07470 858e5095b50dd6642494d399964b05aa 386 Pfam PF16113 Enoyl-CoA hydratase/isomerase 22 364 3.7E-111 T 13-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 BEN78_07470 858e5095b50dd6642494d399964b05aa 386 SUPERFAMILY SSF52096 20 351 8.36E-56 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BEN78_07470 858e5095b50dd6642494d399964b05aa 386 Gene3D G3DSA:3.90.226.10 7 383 2.3E-120 T 13-10-2018 BEN78_07030 590251b46b3dd60dfb7d53026bf26014 205 Pfam PF01810 LysE type translocator 18 204 1.0E-35 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 BEN78_07030 590251b46b3dd60dfb7d53026bf26014 205 PIRSF PIRSF006324 3 205 1.0E-49 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 BEN78_01065 934c0a89023e92a1213895904e9bbeb7 487 Pfam PF01523 Putative modulator of DNA gyrase 46 337 6.7E-70 T 13-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 BEN78_01065 934c0a89023e92a1213895904e9bbeb7 487 SUPERFAMILY SSF111283 29 485 1.83E-131 T 13-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 BEN78_01065 934c0a89023e92a1213895904e9bbeb7 487 PIRSF PIRSF004919 25 486 2.1E-132 T 13-10-2018 IPR025502 TldD BEN78_01065 934c0a89023e92a1213895904e9bbeb7 487 Gene3D G3DSA:3.30.2290.10 25 245 1.4E-22 T 13-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal BEN78_15035 236fa01021d7ccd07b45e71b86a4f1b2 211 SUPERFAMILY SSF48498 87 170 1.37E-10 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BEN78_15035 236fa01021d7ccd07b45e71b86a4f1b2 211 Gene3D G3DSA:1.10.357.10 62 200 8.5E-20 T 13-10-2018 BEN78_15035 236fa01021d7ccd07b45e71b86a4f1b2 211 SUPERFAMILY SSF46689 9 92 9.48E-18 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN78_15035 236fa01021d7ccd07b45e71b86a4f1b2 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 66 6.9E-15 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN78_15035 236fa01021d7ccd07b45e71b86a4f1b2 211 Gene3D G3DSA:1.10.10.60 9 61 6.1E-17 T 13-10-2018 BEN78_15035 236fa01021d7ccd07b45e71b86a4f1b2 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 1.9E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN78_15035 236fa01021d7ccd07b45e71b86a4f1b2 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 1.9E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN78_09310 5060752365897b8d7d6bc2252be0cca7 98 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 23 3.7E-11 T 13-10-2018 IPR024973 ESPR domain BEN78_12890 7a45615e69a3f8eed620ac1e5918f900 412 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 47 401 3.7E-22 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase BEN78_12890 7a45615e69a3f8eed620ac1e5918f900 412 Gene3D G3DSA:3.60.10.10 42 409 7.3E-21 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BEN78_12890 7a45615e69a3f8eed620ac1e5918f900 412 SUPERFAMILY SSF56219 43 408 2.28E-19 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BEN78_03125 e96e7a7509e414711becd13054bf2f89 428 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 416 3.1E-105 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit BEN78_03125 e96e7a7509e414711becd13054bf2f89 428 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 422 6.7E-121 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 BEN78_03125 e96e7a7509e414711becd13054bf2f89 428 PIRSF PIRSF006066 1 428 2.7E-138 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 BEN78_13520 1f75ec4dbadeb4bc2e028e5468ccb7c0 159 Pfam PF08534 Redoxin 5 155 3.1E-32 T 13-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 BEN78_13520 1f75ec4dbadeb4bc2e028e5468ccb7c0 159 SUPERFAMILY SSF52833 1 157 3.06E-38 T 13-10-2018 IPR036249 Thioredoxin-like superfamily BEN78_13520 1f75ec4dbadeb4bc2e028e5468ccb7c0 159 Gene3D G3DSA:3.40.30.10 1 159 3.4E-59 T 13-10-2018 BEN78_00770 49f40c0999c7a5910c9fec5814419c3b 256 Pfam PF05742 Transport and Golgi organisation 2 1 240 1.9E-49 T 13-10-2018 IPR008551 Transport and Golgi organisation protein 2 BEN78_06930 d9a9f105e265df06618a2c3efda18ded 132 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 8 130 27.205 T 13-10-2018 IPR023006 Uncharacterised protein family UPF0225 BEN78_06930 d9a9f105e265df06618a2c3efda18ded 132 SUPERFAMILY SSF54427 31 131 4.64E-32 T 13-10-2018 IPR032710 NTF2-like domain superfamily BEN78_06930 d9a9f105e265df06618a2c3efda18ded 132 Gene3D G3DSA:3.10.450.50 10 132 7.1E-34 T 13-10-2018 BEN78_08885 3502a4ac72cdcce0340e4670556c7022 315 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 47 71 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 BEN78_08885 3502a4ac72cdcce0340e4670556c7022 315 Gene3D G3DSA:3.40.1190.20 1 314 3.0E-106 T 13-10-2018 IPR029056 Ribokinase-like BEN78_08885 3502a4ac72cdcce0340e4670556c7022 315 Pfam PF00294 pfkB family carbohydrate kinase 36 290 1.7E-34 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB BEN78_08885 3502a4ac72cdcce0340e4670556c7022 315 SUPERFAMILY SSF53613 2 297 9.2E-64 T 13-10-2018 IPR029056 Ribokinase-like BEN78_04110 fb6b5e031253ccbbbad0265a9bcc1c06 308 SUPERFAMILY SSF56925 91 308 3.37E-6 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BEN78_04110 fb6b5e031253ccbbbad0265a9bcc1c06 308 Gene3D G3DSA:2.40.170.20 24 307 8.5E-6 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_00995 96e617f0259bf7d9bcd3731b013fd4c7 423 Pfam PF02684 Lipid-A-disaccharide synthetase 34 406 8.1E-107 T 13-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 BEN78_00995 96e617f0259bf7d9bcd3731b013fd4c7 423 Gene3D G3DSA:3.40.50.2000 202 389 3.1E-6 T 13-10-2018 BEN78_00995 96e617f0259bf7d9bcd3731b013fd4c7 423 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 31 410 41.057 T 13-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 BEN78_00995 96e617f0259bf7d9bcd3731b013fd4c7 423 SUPERFAMILY SSF53756 33 388 1.05E-33 T 13-10-2018 BEN78_00995 96e617f0259bf7d9bcd3731b013fd4c7 423 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 33 406 3.1E-110 T 13-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 BEN78_09285 d5277a203d1986411e78b4619595f451 369 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 7 366 1.1E-95 T 13-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 BEN78_09285 d5277a203d1986411e78b4619595f451 369 Pfam PF03739 Predicted permease YjgP/YjgQ family 11 366 9.2E-59 T 13-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 BEN78_08730 60502d58a97eedbc9c3969ba8f9c59d2 316 PIRSF PIRSF003097 19 310 2.1E-52 T 13-10-2018 IPR004513 Cell division protein FtsX GO:0016021 BEN78_01905 7e1e67040ee9da2609ae94d630146814 457 SUPERFAMILY SSF51004 209 426 4.71E-27 T 13-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily BEN78_01905 7e1e67040ee9da2609ae94d630146814 457 Gene3D G3DSA:2.130.10.10 135 453 1.1E-73 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BEN78_04655 aa48d440ac8871c0e402a31c628ffaee 177 SUPERFAMILY SSF53597 5 174 7.85E-33 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 BEN78_04655 aa48d440ac8871c0e402a31c628ffaee 177 Gene3D G3DSA:3.40.430.10 5 173 9.1E-39 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 BEN78_04655 aa48d440ac8871c0e402a31c628ffaee 177 Pfam PF01872 RibD C-terminal domain 8 166 7.5E-15 T 13-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 BEN78_05940 1b55adfe65b20366c358c298d4a5dad3 64 Pfam PF00403 Heavy-metal-associated domain 3 59 8.5E-13 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 BEN78_05940 1b55adfe65b20366c358c298d4a5dad3 64 SUPERFAMILY SSF55008 2 61 1.7E-14 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 BEN78_05940 1b55adfe65b20366c358c298d4a5dad3 64 Gene3D G3DSA:3.30.70.100 1 61 3.7E-18 T 13-10-2018 BEN78_12875 dda87e85311b0b12a4ba54adf4de6141 368 Gene3D G3DSA:3.30.470.20 208 318 4.5E-11 T 13-10-2018 BEN78_12875 dda87e85311b0b12a4ba54adf4de6141 368 SUPERFAMILY SSF56059 123 303 5.55E-18 T 13-10-2018 BEN78_02295 f6ee4a3a189317e178ba066f9d8e12c1 222 SUPERFAMILY SSF144064 21 117 9.16E-13 T 13-10-2018 BEN78_02295 f6ee4a3a189317e178ba066f9d8e12c1 222 Gene3D G3DSA:3.40.1570.10 19 116 2.8E-5 T 13-10-2018 BEN78_16045 98258e7168ee116cdf7a9757218d0017 434 Pfam PF02667 Short chain fatty acid transporter 1 433 2.2E-142 T 13-10-2018 IPR006160 Short chain fatty acid transporter AtoE BEN78_00900 65909b0a54744a17843fde776e557771 88 Gene3D G3DSA:1.20.1280.290 3 88 7.7E-10 T 13-10-2018 BEN78_05325 b64e8dec4620349cce6bff4f30d13b7f 168 Pfam PF11066 Protein of unknown function (DUF2867) 20 158 3.1E-32 T 13-10-2018 IPR021295 Protein of unknown function DUF2867 BEN78_06055 dde3dd8c13591c2d6eb8cb2e759da11d 137 SUPERFAMILY SSF52038 12 91 3.79E-10 T 13-10-2018 IPR035905 Barstar-like superfamily BEN78_06055 dde3dd8c13591c2d6eb8cb2e759da11d 137 Pfam PF01337 Barstar (barnase inhibitor) 14 81 8.5E-6 T 13-10-2018 IPR000468 Barstar (barnase inhibitor) BEN78_10805 5b136eaa59705d1aa1fea7fe5be9776a 212 Gene3D G3DSA:2.40.50.140 7 79 4.5E-12 T 13-10-2018 BEN78_10805 5b136eaa59705d1aa1fea7fe5be9776a 212 Pfam PF06961 Protein of unknown function (DUF1294) 135 189 1.5E-21 T 13-10-2018 IPR010718 Protein of unknown function DUF1294 BEN78_10805 5b136eaa59705d1aa1fea7fe5be9776a 212 SUPERFAMILY SSF50249 7 73 1.2E-9 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN78_10805 5b136eaa59705d1aa1fea7fe5be9776a 212 SMART SM00357 7 73 0.0025 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 BEN78_03995 ea4004cc111277e0c109fca96b015735 403 Pfam PF02687 FtsX-like permease family 310 396 1.5E-9 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BEN78_03995 ea4004cc111277e0c109fca96b015735 403 Pfam PF12704 MacB-like periplasmic core domain 30 245 5.6E-10 T 13-10-2018 IPR025857 MacB-like periplasmic core domain BEN78_01525 ba4b9abd04d860d6983c3c4622b34542 124 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 4 121 18.822 T 13-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 BEN78_01525 ba4b9abd04d860d6983c3c4622b34542 124 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 5 116 1.8E-22 T 13-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 BEN78_01525 ba4b9abd04d860d6983c3c4622b34542 124 TIGRFAM TIGR00494 crcB: protein CrcB 6 119 2.1E-26 T 13-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 BEN78_00885 5dacca30c2f49ed3575192d90e144628 262 Pfam PF06884 Protein of unknown function (DUF1264) 55 224 1.6E-60 T 13-10-2018 IPR010686 Oil body-associated protein-like BEN78_10675 c5294d53c7d4c34b00125190af55ff3d 661 SUPERFAMILY SSF117892 60 208 4.97E-9 T 13-10-2018 IPR036013 Band 7/SPFH domain superfamily BEN78_02495 4410c49952bbf49b8165360275c28b13 496 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 467 7.6E-135 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BEN78_02495 4410c49952bbf49b8165360275c28b13 496 PRINTS PR00175 Sodium/alanine symporter signature 196 214 4.2E-55 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BEN78_02495 4410c49952bbf49b8165360275c28b13 496 PRINTS PR00175 Sodium/alanine symporter signature 315 333 4.2E-55 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BEN78_02495 4410c49952bbf49b8165360275c28b13 496 PRINTS PR00175 Sodium/alanine symporter signature 436 456 4.2E-55 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BEN78_02495 4410c49952bbf49b8165360275c28b13 496 PRINTS PR00175 Sodium/alanine symporter signature 86 108 4.2E-55 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BEN78_02495 4410c49952bbf49b8165360275c28b13 496 PRINTS PR00175 Sodium/alanine symporter signature 224 243 4.2E-55 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BEN78_02495 4410c49952bbf49b8165360275c28b13 496 PRINTS PR00175 Sodium/alanine symporter signature 373 395 4.2E-55 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BEN78_02495 4410c49952bbf49b8165360275c28b13 496 Pfam PF01235 Sodium:alanine symporter family 51 479 7.3E-152 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BEN78_14565 da70ba0daa00d6f02b61e14b1252234f 189 Pfam PF16823 Atypical PilZ domain, cyclic di-GMP receptor 47 188 9.6E-41 T 13-10-2018 IPR031800 Cyclic di-GMP receptor, atypical PilZ domain BEN78_06085 e7e9d1f265534dd49b70751b1d9069e6 109 Gene3D G3DSA:3.30.2310.20 1 93 1.7E-19 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily BEN78_06085 e7e9d1f265534dd49b70751b1d9069e6 109 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 87 1.5E-18 T 13-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family BEN78_03975 e7c704a27e2142565dda3c459af502da 230 SMART SM00382 30 217 2.4E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_03975 e7c704a27e2142565dda3c459af502da 230 Gene3D G3DSA:3.40.50.300 1 227 1.0E-63 T 13-10-2018 BEN78_03975 e7c704a27e2142565dda3c459af502da 230 Pfam PF00005 ABC transporter 22 169 6.6E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_03975 e7c704a27e2142565dda3c459af502da 230 SUPERFAMILY SSF52540 1 221 4.2E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_03975 e7c704a27e2142565dda3c459af502da 230 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN78_03625 c7bd801b567671434feb6d8bb71a9039 52 Pfam PF08085 Entericidin EcnA/B family 22 42 2.0E-10 T 13-10-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 BEN78_12025 04f772f9ef6668f276bd60aabf855cb3 227 Pfam PF06912 Protein of unknown function (DUF1275) 13 207 1.5E-36 T 13-10-2018 IPR010699 Protein of unknown function DUF1275 BEN78_04380 ea72d20a4d27ff7130a396f85d410ccd 448 Gene3D G3DSA:3.30.300.30 344 445 1.0E-13 T 13-10-2018 BEN78_04380 ea72d20a4d27ff7130a396f85d410ccd 448 Pfam PF00501 AMP-binding enzyme 125 291 2.3E-17 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BEN78_04380 ea72d20a4d27ff7130a396f85d410ccd 448 SUPERFAMILY SSF56801 40 444 6.02E-47 T 13-10-2018 BEN78_04380 ea72d20a4d27ff7130a396f85d410ccd 448 Gene3D G3DSA:3.40.50.12780 103 343 1.2E-20 T 13-10-2018 BEN78_15615 abd4a3a8218b595521fcefeeb187390f 188 Pfam PF13302 Acetyltransferase (GNAT) domain 17 153 1.2E-28 T 13-10-2018 IPR000182 GNAT domain BEN78_15615 abd4a3a8218b595521fcefeeb187390f 188 Gene3D G3DSA:3.40.630.30 5 162 1.2E-41 T 13-10-2018 BEN78_15615 abd4a3a8218b595521fcefeeb187390f 188 SUPERFAMILY SSF55729 10 157 1.23E-36 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN78_16465 b11dd13bfe753d20c2777fa57c3bfb8a 195 SUPERFAMILY SSF46689 2 85 1.08E-19 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN78_16465 b11dd13bfe753d20c2777fa57c3bfb8a 195 SUPERFAMILY SSF48498 121 192 1.21E-5 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BEN78_16465 b11dd13bfe753d20c2777fa57c3bfb8a 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 3.3E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN78_16465 b11dd13bfe753d20c2777fa57c3bfb8a 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 3.3E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN78_16465 b11dd13bfe753d20c2777fa57c3bfb8a 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 2.1E-13 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN78_16465 b11dd13bfe753d20c2777fa57c3bfb8a 195 Gene3D G3DSA:1.10.357.10 1 194 2.0E-67 T 13-10-2018 BEN78_12125 ddb4e9a1b6f2136f03d455a4daa5231a 392 Pfam PF01963 TraB family 57 327 7.7E-66 T 13-10-2018 IPR002816 Pheromone shutdown, TraB BEN78_03000 a3a237d5b8a2ab75a3804122bd76df19 326 SUPERFAMILY SSF53756 14 304 1.88E-19 T 13-10-2018 BEN78_03000 a3a237d5b8a2ab75a3804122bd76df19 326 Pfam PF00534 Glycosyl transferases group 1 148 263 4.5E-10 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 BEN78_03000 a3a237d5b8a2ab75a3804122bd76df19 326 Gene3D G3DSA:3.40.50.2000 138 303 2.3E-16 T 13-10-2018 BEN78_15720 e4122bade52ca2656d7a1b545b3a329a 558 SUPERFAMILY SSF56112 87 308 6.32E-28 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily BEN78_15720 e4122bade52ca2656d7a1b545b3a329a 558 Pfam PF03109 ABC1 family 106 223 1.0E-33 T 13-10-2018 IPR004147 UbiB domain BEN78_11840 f0b5e1eaf2e4152c815a55b8212a2013 102 Gene3D G3DSA:1.10.10.10 1 102 4.8E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_11840 f0b5e1eaf2e4152c815a55b8212a2013 102 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 2 76 7.9E-17 T 13-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 BEN78_11840 f0b5e1eaf2e4152c815a55b8212a2013 102 SUPERFAMILY SSF46767 3 77 7.98E-17 T 13-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 BEN78_11480 cf57a11bef152bd8d97ff23ba8ed390a 253 Pfam PF06283 Trehalose utilisation 37 246 5.7E-62 T 13-10-2018 IPR029010 ThuA-like domain BEN78_11480 cf57a11bef152bd8d97ff23ba8ed390a 253 SUPERFAMILY SSF52317 37 249 3.89E-38 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN78_11480 cf57a11bef152bd8d97ff23ba8ed390a 253 Gene3D G3DSA:3.40.50.880 20 252 7.6E-69 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN78_00830 58e7e399f56bdc7959dde4b3e0d875e1 122 Pfam PF04241 Protein of unknown function (DUF423) 25 102 8.4E-6 T 13-10-2018 IPR006696 Protein of unknown function DUF423 BEN78_11225 fac38fc34ccc81a28717eaa5da6373b3 152 Pfam PF09900 Predicted membrane protein (DUF2127) 11 144 7.9E-35 T 13-10-2018 IPR021125 Protein of unknown function DUF2127 BEN78_16255 5f389625e28b1ff6f67aa04d354013bd 386 Pfam PF13421 SPFH domain-Band 7 family 58 286 4.0E-7 T 13-10-2018 IPR033880 SPFH domain, YdjI-like BEN78_04665 5e0d932df7c6add9a2580ae9be985625 287 SMART SM00849 54 243 1.0E-28 T 13-10-2018 IPR001279 Metallo-beta-lactamase BEN78_04665 5e0d932df7c6add9a2580ae9be985625 287 Pfam PF00753 Metallo-beta-lactamase superfamily 56 243 5.7E-28 T 13-10-2018 IPR001279 Metallo-beta-lactamase BEN78_04665 5e0d932df7c6add9a2580ae9be985625 287 SUPERFAMILY SSF56281 29 248 2.1E-45 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN78_04665 5e0d932df7c6add9a2580ae9be985625 287 Gene3D G3DSA:3.60.15.10 26 286 3.9E-78 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN78_03980 462f8e85aef9374f1aef3b26bfe10d6f 440 Pfam PF02687 FtsX-like permease family 344 433 1.7E-9 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BEN78_03980 462f8e85aef9374f1aef3b26bfe10d6f 440 Pfam PF12704 MacB-like periplasmic core domain 20 272 1.5E-20 T 13-10-2018 IPR025857 MacB-like periplasmic core domain BEN78_01425 8ae57d95251c216453e4c7b88b874dab 334 Pfam PF04616 Glycosyl hydrolases family 43 85 321 2.1E-25 T 13-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 BEN78_01425 8ae57d95251c216453e4c7b88b874dab 334 SUPERFAMILY SSF75005 16 331 1.23E-52 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BEN78_01425 8ae57d95251c216453e4c7b88b874dab 334 Gene3D G3DSA:2.115.10.20 6 332 4.8E-94 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BEN78_10170 b946df2ad43c6772a8fc84a085bccb92 412 Pfam PF02687 FtsX-like permease family 317 405 1.7E-11 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BEN78_10170 b946df2ad43c6772a8fc84a085bccb92 412 Pfam PF12704 MacB-like periplasmic core domain 21 250 1.4E-31 T 13-10-2018 IPR025857 MacB-like periplasmic core domain BEN78_09255 2e9f8cab0b049bd30e225b8e3def6658 269 Hamap MF_00548 Zinc transporter ZupT [zupT]. 9 268 34.047 T 13-10-2018 IPR023498 Zinc transporter ZupT BEN78_09255 2e9f8cab0b049bd30e225b8e3def6658 269 Pfam PF02535 ZIP Zinc transporter 121 261 3.2E-20 T 13-10-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 BEN78_14020 8df06d08bdbf0174a3640cffa2ebdeb7 491 Pfam PF11066 Protein of unknown function (DUF2867) 302 442 6.4E-22 T 13-10-2018 IPR021295 Protein of unknown function DUF2867 BEN78_11640 62f8ab046b9a49a538983cb1cd8c7d1e 199 Pfam PF01914 MarC family integral membrane protein 4 192 5.8E-47 T 13-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 BEN78_04015 6ae67a76f78e9ecc3e31e0f312a93703 396 Pfam PF02687 FtsX-like permease family 303 385 1.1E-9 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BEN78_04255 d1b59359bf9603f50a6c5071702b13f1 230 Pfam PF01551 Peptidase family M23 116 222 3.8E-20 T 13-10-2018 IPR016047 Peptidase M23 BEN78_04255 d1b59359bf9603f50a6c5071702b13f1 230 SUPERFAMILY SSF51261 79 227 9.94E-30 T 13-10-2018 IPR011055 Duplicated hybrid motif BEN78_04255 d1b59359bf9603f50a6c5071702b13f1 230 Gene3D G3DSA:2.70.70.10 90 229 6.6E-42 T 13-10-2018 IPR011055 Duplicated hybrid motif BEN78_08500 090900903d538689fa292f2b7d64f76a 78 SUPERFAMILY SSF55021 1 74 3.89E-6 T 13-10-2018 BEN78_08500 090900903d538689fa292f2b7d64f76a 78 Pfam PF13710 ACT domain 12 72 1.5E-16 T 13-10-2018 BEN78_05370 efdd4141ddada4fc0be1c2229e90bd0b 69 SUPERFAMILY SSF55331 2 60 1.03E-12 T 13-10-2018 IPR014347 Tautomerase/MIF superfamily BEN78_05370 efdd4141ddada4fc0be1c2229e90bd0b 69 Pfam PF01361 Tautomerase enzyme 2 58 8.1E-10 T 13-10-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 BEN78_05370 efdd4141ddada4fc0be1c2229e90bd0b 69 Gene3D G3DSA:3.30.429.10 1 63 1.3E-16 T 13-10-2018 IPR014347 Tautomerase/MIF superfamily BEN78_09375 3d10d1d85961f751e13e42f8b498e60c 146 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 33 1.0E-6 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site BEN78_09375 3d10d1d85961f751e13e42f8b498e60c 146 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site BEN78_09375 3d10d1d85961f751e13e42f8b498e60c 146 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 33 1.7E-4 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site BEN78_10140 5a08a10726c85c4a1e0f232168e35870 114 Pfam PF04342 Putative member of DMT superfamily (DUF486) 10 112 1.4E-44 T 13-10-2018 IPR007437 Protein of unknown function DUF486 BEN78_10140 5a08a10726c85c4a1e0f232168e35870 114 PIRSF PIRSF021239 4 114 1.9E-48 T 13-10-2018 IPR007437 Protein of unknown function DUF486 BEN78_05540 c9fafa6012e39df3a7dfe2b54716e67a 347 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 323 340 1.9E-8 T 13-10-2018 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 BEN78_05540 c9fafa6012e39df3a7dfe2b54716e67a 347 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 278 290 1.9E-8 T 13-10-2018 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 BEN78_05540 c9fafa6012e39df3a7dfe2b54716e67a 347 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 201 211 1.9E-8 T 13-10-2018 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 BEN78_05540 c9fafa6012e39df3a7dfe2b54716e67a 347 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 278 345 2.8E-13 T 13-10-2018 IPR001543 Surface presentation of antigen (SpoA) BEN78_05540 c9fafa6012e39df3a7dfe2b54716e67a 347 SUPERFAMILY SSF101801 276 346 1.07E-14 T 13-10-2018 IPR036429 SpoA-like superfamily BEN78_05540 c9fafa6012e39df3a7dfe2b54716e67a 347 Gene3D G3DSA:2.30.330.10 264 347 1.5E-21 T 13-10-2018 IPR036429 SpoA-like superfamily BEN78_05540 c9fafa6012e39df3a7dfe2b54716e67a 347 TIGRFAM TIGR02551 SpaO_YscQ: type III secretion apparatus protein, YscQ/HrcQ family 59 346 2.2E-33 T 13-10-2018 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO GO:0030254 BEN78_13070 578ba656ad0b53aa5d39347f21c2b5b5 159 SUPERFAMILY SSF55729 12 146 5.85E-23 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN78_13070 578ba656ad0b53aa5d39347f21c2b5b5 159 Pfam PF00583 Acetyltransferase (GNAT) family 80 141 4.2E-10 T 13-10-2018 IPR000182 GNAT domain BEN78_13070 578ba656ad0b53aa5d39347f21c2b5b5 159 Gene3D G3DSA:3.40.630.30 7 152 2.1E-32 T 13-10-2018 BEN78_10265 87b9ee8727aff47a3294dfe0c8597718 303 PRINTS PR01270 Histone deacetylase superfamily signature 231 241 3.1E-16 T 13-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 BEN78_10265 87b9ee8727aff47a3294dfe0c8597718 303 PRINTS PR01270 Histone deacetylase superfamily signature 151 166 3.1E-16 T 13-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 BEN78_10265 87b9ee8727aff47a3294dfe0c8597718 303 PRINTS PR01270 Histone deacetylase superfamily signature 117 140 3.1E-16 T 13-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 BEN78_10265 87b9ee8727aff47a3294dfe0c8597718 303 Pfam PF00850 Histone deacetylase domain 18 301 8.5E-81 T 13-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 BEN78_10265 87b9ee8727aff47a3294dfe0c8597718 303 SUPERFAMILY SSF52768 2 302 7.67E-100 T 13-10-2018 IPR023696 Ureohydrolase domain superfamily BEN78_10265 87b9ee8727aff47a3294dfe0c8597718 303 Gene3D G3DSA:3.40.800.20 3 303 4.3E-110 T 13-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 BEN78_10160 9735f97a7d36a4d97bf3ce39bed9678f 82 Gene3D G3DSA:2.40.420.20 17 76 3.0E-6 T 13-10-2018 BEN78_12550 67e936c527099c93907d5359e7244db3 166 SUPERFAMILY SSF142433 10 163 2.09E-55 T 13-10-2018 IPR036653 CinA-like, C-terminal BEN78_12550 67e936c527099c93907d5359e7244db3 166 Gene3D G3DSA:3.90.950.20 1 165 3.9E-60 T 13-10-2018 IPR036653 CinA-like, C-terminal BEN78_12550 67e936c527099c93907d5359e7244db3 166 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 18 162 1.1E-47 T 13-10-2018 IPR008136 CinA, C-terminal BEN78_12550 67e936c527099c93907d5359e7244db3 166 Pfam PF02464 Competence-damaged protein 11 164 4.2E-57 T 13-10-2018 IPR008136 CinA, C-terminal BEN78_00570 ae688e839b150e70676652863e38ffc4 328 Pfam PF00953 Glycosyl transferase family 4 72 209 4.7E-24 T 13-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 BEN78_04930 4bd3328f0319d121e293eadfc1b5dcc6 128 Gene3D G3DSA:3.40.960.10 14 113 9.6E-35 T 13-10-2018 BEN78_04930 4bd3328f0319d121e293eadfc1b5dcc6 128 SUPERFAMILY SSF52980 5 112 1.29E-22 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 BEN78_04930 4bd3328f0319d121e293eadfc1b5dcc6 128 Pfam PF04480 Protein of unknown function (DUF559) 7 110 7.5E-41 T 13-10-2018 IPR007569 Protein of unknown function DUF559 BEN78_05480 ed58dcfd06dfc5be8ea3d7e68627487d 160 Pfam PF16789 YscO-like protein 1 159 3.2E-17 T 13-10-2018 IPR031869 YscO-like protein BEN78_04450 0c01f36aa2cd476630dc42da547c3c53 466 Pfam PF03929 PepSY-associated TM region 19 408 9.2E-65 T 13-10-2018 IPR005625 PepSY-associated TM protein BEN78_10165 d4e5496ad0e629576eea1ccbe57e94b7 254 Pfam PF00005 ABC transporter 33 181 6.3E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN78_10165 d4e5496ad0e629576eea1ccbe57e94b7 254 SMART SM00382 42 229 1.5E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain BEN78_10165 d4e5496ad0e629576eea1ccbe57e94b7 254 Gene3D G3DSA:3.40.50.300 10 250 1.8E-72 T 13-10-2018 BEN78_10165 d4e5496ad0e629576eea1ccbe57e94b7 254 SUPERFAMILY SSF52540 12 234 1.06E-72 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_10165 d4e5496ad0e629576eea1ccbe57e94b7 254 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN78_13405 cd0c055d0b0c2212a2ff2943ab070e52 274 Pfam PF12679 ABC-2 family transporter protein 11 273 9.3E-38 T 13-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 BEN78_15140 42b3473a07bd823b99d8caa34db1ccb0 355 Gene3D G3DSA:3.40.710.10 1 343 1.8E-81 T 13-10-2018 BEN78_15140 42b3473a07bd823b99d8caa34db1ccb0 355 Pfam PF00144 Beta-lactamase 1 341 1.6E-65 T 13-10-2018 IPR001466 Beta-lactamase-related BEN78_15140 42b3473a07bd823b99d8caa34db1ccb0 355 SUPERFAMILY SSF56601 1 338 5.63E-76 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BEN78_01070 96a4f38fb715989a6a4004ed0b5e5790 1285 Pfam PF13502 AsmA-like C-terminal region 1021 1263 2.1E-53 T 13-10-2018 IPR032712 AsmA-like, C-terminal BEN78_01070 96a4f38fb715989a6a4004ed0b5e5790 1285 Pfam PF13116 Protein of unknown function 513 788 1.7E-35 T 13-10-2018 IPR025263 Domain of unknown function DUF3971 BEN78_01070 96a4f38fb715989a6a4004ed0b5e5790 1285 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 16 1271 1.2E-271 T 13-10-2018 IPR011836 Conserved hypothetical protein CHP02099 BEN78_00550 b94f5c9af34419cc76ca822af1af8b16 337 SUPERFAMILY SSF56059 92 273 1.96E-18 T 13-10-2018 BEN78_00550 b94f5c9af34419cc76ca822af1af8b16 337 Gene3D G3DSA:3.30.470.20 178 287 3.4E-13 T 13-10-2018 BEN78_10520 735590ebdd8e6f532a8c688be7dc824c 636 Gene3D G3DSA:3.30.2010.10 84 177 7.0E-32 T 13-10-2018 BEN78_10520 735590ebdd8e6f532a8c688be7dc824c 636 Pfam PF01435 Peptidase family M48 95 308 1.9E-28 T 13-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 BEN78_10520 735590ebdd8e6f532a8c688be7dc824c 636 SUPERFAMILY SSF51658 409 533 7.87E-5 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily BEN78_06585 fdeb1a1bf5aa61a8a27ad3468882b40f 259 Gene3D G3DSA:1.10.10.60 159 258 8.7E-16 T 13-10-2018 BEN78_06585 fdeb1a1bf5aa61a8a27ad3468882b40f 259 SMART SM00342 172 254 1.7E-9 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BEN78_06585 fdeb1a1bf5aa61a8a27ad3468882b40f 259 Pfam PF12833 Helix-turn-helix domain 178 255 3.3E-16 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BEN78_02335 1ea093bcfc5ac7a5d028ce0c7aa12ca0 349 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 182 1.5E-27 T 13-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase BEN78_04440 7652ddb8cb91ab1048c584f444c0945b 133 Pfam PF11162 Protein of unknown function (DUF2946) 12 130 4.2E-9 T 13-10-2018 IPR021333 Protein of unknown function DUF2946 BEN78_07140 d4521c677a344fecee1f728e492b8836 158 Gene3D G3DSA:3.30.1360.200 62 152 2.5E-6 T 13-10-2018 BEN78_01680 4bd2c4cc7cb90c40d79868d09995637e 68 Gene3D G3DSA:2.10.109.10 34 68 4.1E-8 T 13-10-2018 BEN78_04490 46c210f5c6d3cc6a9261de648c3e815d 223 Pfam PF13471 Transglutaminase-like superfamily 124 221 2.4E-18 T 13-10-2018 IPR032708 Microcin J25-processing protein McjB, C-terminal BEN78_06630 95fd96b0c3c615e60415e300ad959754 167 SUPERFAMILY SSF81342 1 160 4.16E-27 T 13-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 BEN78_06630 95fd96b0c3c615e60415e300ad959754 167 Pfam PF01292 Prokaryotic cytochrome b561 1 157 4.7E-19 T 13-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 BEN78_07305 bfe5a4200d1e6d92f9452de6565b489d 102 Pfam PF01230 HIT domain 14 91 1.1E-13 T 13-10-2018 IPR001310 Histidine triad (HIT) protein BEN78_07305 bfe5a4200d1e6d92f9452de6565b489d 102 SUPERFAMILY SSF54197 4 95 1.29E-22 T 13-10-2018 IPR036265 HIT-like superfamily BEN78_07305 bfe5a4200d1e6d92f9452de6565b489d 102 Gene3D G3DSA:3.30.428.10 1 100 2.1E-26 T 13-10-2018 IPR036265 HIT-like superfamily BEN78_06755 3a8509cd9b6e120173db44c4b7f5137b 155 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 14 147 3.5E-35 T 13-10-2018 IPR012660 Thioesterase, putative BEN78_06755 3a8509cd9b6e120173db44c4b7f5137b 155 SUPERFAMILY SSF54637 12 146 8.44E-29 T 13-10-2018 IPR029069 HotDog domain superfamily BEN78_06755 3a8509cd9b6e120173db44c4b7f5137b 155 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 15 146 8.2E-34 T 13-10-2018 IPR012660 Thioesterase, putative BEN78_06755 3a8509cd9b6e120173db44c4b7f5137b 155 Gene3D G3DSA:3.10.129.10 2 150 1.3E-38 T 13-10-2018 BEN78_04745 dd19b7c31c26951ad4c52c653eb47470 420 Gene3D G3DSA:3.40.50.2000 1 245 2.0E-25 T 13-10-2018 BEN78_04745 dd19b7c31c26951ad4c52c653eb47470 420 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 307 371 2.5E-7 T 13-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 BEN78_04745 dd19b7c31c26951ad4c52c653eb47470 420 SUPERFAMILY SSF53756 1 414 6.63E-52 T 13-10-2018 BEN78_04745 dd19b7c31c26951ad4c52c653eb47470 420 Gene3D G3DSA:3.40.50.2000 248 401 9.2E-20 T 13-10-2018 BEN78_02935 92da22fdd3017ac3d9a5090f90f1ce0b 120 Pfam PF13761 Domain of unknown function (DUF4166) 10 113 1.3E-10 T 13-10-2018 IPR025311 Domain of unknown function DUF4166 BEN78_02065 e1cc03d506dfa0e2ea2ef5d205350b87 399 Gene3D G3DSA:3.40.50.1820 223 392 1.3E-8 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_02065 e1cc03d506dfa0e2ea2ef5d205350b87 399 Pfam PF00561 alpha/beta hydrolase fold 36 167 1.7E-8 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN78_02065 e1cc03d506dfa0e2ea2ef5d205350b87 399 SUPERFAMILY SSF53474 8 390 1.42E-22 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_02065 e1cc03d506dfa0e2ea2ef5d205350b87 399 Pfam PF08386 TAP-like protein 324 395 1.6E-6 T 13-10-2018 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal BEN78_04495 657836cc9f7de73704304f5eed0b465b 579 SUPERFAMILY SSF52402 211 557 1.82E-26 T 13-10-2018 BEN78_04495 657836cc9f7de73704304f5eed0b465b 579 Pfam PF00733 Asparagine synthase 234 576 1.4E-20 T 13-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 BEN78_04495 657836cc9f7de73704304f5eed0b465b 579 SUPERFAMILY SSF56235 61 199 2.12E-7 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BEN78_15915 ea8e31baf71cda95adf849886c42d4fa 177 Pfam PF11159 Protein of unknown function (DUF2939) 13 104 5.2E-22 T 13-10-2018 IPR021330 Protein of unknown function DUF2939 BEN78_13210 e547dcfd184e007cb2ba014d7fdeb69a 80 Gene3D G3DSA:3.10.20.30 4 80 2.1E-19 T 13-10-2018 IPR012675 Beta-grasp domain superfamily BEN78_13210 e547dcfd184e007cb2ba014d7fdeb69a 80 SUPERFAMILY SSF54285 4 80 1.12E-15 T 13-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp BEN78_13210 e547dcfd184e007cb2ba014d7fdeb69a 80 Pfam PF02597 ThiS family 7 80 1.5E-14 T 13-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 BEN78_04300 287c5dbb184cd7852a920a348c116d81 370 SUPERFAMILY SSF56935 25 257 7.33E-9 T 13-10-2018 BEN78_00820 b18ad03e79b4aab23ac6ab7536c22ffd 273 Pfam PF02517 CAAX protease self-immunity 144 258 8.2E-15 T 13-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 BEN78_00535 98c3c2119bd08f4ec836ce3d4dffa04d 347 Pfam PF05229 Spore Coat Protein U domain 34 163 2.1E-6 T 13-10-2018 IPR007893 Spore coat protein U BEN78_00535 98c3c2119bd08f4ec836ce3d4dffa04d 347 Pfam PF05229 Spore Coat Protein U domain 204 343 1.5E-26 T 13-10-2018 IPR007893 Spore coat protein U BEN78_00535 98c3c2119bd08f4ec836ce3d4dffa04d 347 SMART SM00972 103 164 0.078 T 13-10-2018 IPR007893 Spore coat protein U BEN78_00535 98c3c2119bd08f4ec836ce3d4dffa04d 347 SMART SM00972 277 344 2.5E-7 T 13-10-2018 IPR007893 Spore coat protein U BEN78_09290 10920f009f8055d3f778e541fe3270b1 160 Pfam PF06271 RDD family 16 148 2.0E-22 T 13-10-2018 IPR010432 RDD BEN78_02760 540c9b67fd4813b4344c5d89dd13f42e 574 Gene3D G3DSA:3.20.70.20 44 573 2.8E-104 T 13-10-2018 BEN78_02760 540c9b67fd4813b4344c5d89dd13f42e 574 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 32 564 8.5E-172 T 13-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 BEN78_02760 540c9b67fd4813b4344c5d89dd13f42e 574 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 31 568 1.2E-136 T 13-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 BEN78_02760 540c9b67fd4813b4344c5d89dd13f42e 574 SUPERFAMILY SSF51998 32 565 4.88E-158 T 13-10-2018 BEN78_13825 36d0b654c9a7cdd027fabe73f604bc2d 319 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 24 100 2.7E-10 T 13-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 BEN78_13825 36d0b654c9a7cdd027fabe73f604bc2d 319 SUPERFAMILY SSF89069 23 89 3.27E-10 T 13-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 BEN78_13825 36d0b654c9a7cdd027fabe73f604bc2d 319 Gene3D G3DSA:1.10.10.880 22 90 1.4E-10 T 13-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 BEN78_08610 732c1d4cf9bd68846cc90e6175755062 459 SUPERFAMILY SSF56935 95 459 5.49E-23 T 13-10-2018 BEN78_14305 6789caa9dc2f50557e6490d6e68d0086 341 Gene3D G3DSA:3.40.190.10 34 331 8.0E-93 T 13-10-2018 BEN78_14305 6789caa9dc2f50557e6490d6e68d0086 341 SUPERFAMILY SSF53850 29 278 1.98E-35 T 13-10-2018 BEN78_14305 6789caa9dc2f50557e6490d6e68d0086 341 Gene3D G3DSA:3.40.190.10 112 223 8.0E-93 T 13-10-2018 BEN78_14305 6789caa9dc2f50557e6490d6e68d0086 341 Pfam PF09084 NMT1/THI5 like 40 261 2.8E-22 T 13-10-2018 IPR015168 SsuA/THI5-like BEN78_16400 0ef009faa97e103869693ec3f11a7189 251 Pfam PF00117 Glutamine amidotransferase class-I 23 180 1.6E-15 T 13-10-2018 IPR017926 Glutamine amidotransferase BEN78_16400 0ef009faa97e103869693ec3f11a7189 251 Gene3D G3DSA:3.40.50.880 2 235 8.7E-58 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN78_16400 0ef009faa97e103869693ec3f11a7189 251 SUPERFAMILY SSF52317 2 189 3.44E-43 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN78_07365 fe1802db2a8e8ba5282ee13d0318116a 733 SUPERFAMILY SSF56436 485 728 1.46E-45 T 13-10-2018 IPR016187 C-type lectin fold BEN78_07365 fe1802db2a8e8ba5282ee13d0318116a 733 Gene3D G3DSA:3.90.1580.10 484 728 4.5E-44 T 13-10-2018 BEN78_07365 fe1802db2a8e8ba5282ee13d0318116a 733 Pfam PF03781 Sulfatase-modifying factor enzyme 1 483 725 1.0E-35 T 13-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 BEN78_11675 ab53e2e56a0d2713b0e3fc2f4a88784f 186 Pfam PF13681 Type IV pilus assembly protein PilX C-term 105 178 1.5E-7 T 13-10-2018 IPR025205 PilX/PilW C-terminal domain BEN78_11675 ab53e2e56a0d2713b0e3fc2f4a88784f 186 Pfam PF14341 PilX N-terminal 15 65 3.2E-13 T 13-10-2018 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain BEN78_08755 1b7cbf04af567fb416ceb186eab129fc 144 SUPERFAMILY SSF160424 11 117 3.01E-8 T 13-10-2018 IPR036170 Probable antitoxin YezG superfamily BEN78_09280 5e48297f67fec87847bc9616a059c1e0 361 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 348 1.1E-64 T 13-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 BEN78_09280 5e48297f67fec87847bc9616a059c1e0 361 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 4 348 4.4E-102 T 13-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 BEN78_13345 50bd40e4919547ab4cd7e184808b372f 436 Pfam PF13416 Bacterial extracellular solute-binding protein 44 350 6.7E-41 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein BEN78_13345 50bd40e4919547ab4cd7e184808b372f 436 SUPERFAMILY SSF53850 30 408 5.76E-81 T 13-10-2018 BEN78_13345 50bd40e4919547ab4cd7e184808b372f 436 Gene3D G3DSA:3.40.190.10 43 370 3.5E-129 T 13-10-2018 BEN78_13345 50bd40e4919547ab4cd7e184808b372f 436 Gene3D G3DSA:3.40.190.10 143 407 3.5E-129 T 13-10-2018 BEN78_14525 b66456f813602feb50cea26ad0b8358e 206 PRINTS PR01003 Flagellar assembly protein FliH signature 54 72 4.4E-5 T 13-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 BEN78_14525 b66456f813602feb50cea26ad0b8358e 206 PRINTS PR01003 Flagellar assembly protein FliH signature 93 110 4.4E-5 T 13-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 BEN78_14525 b66456f813602feb50cea26ad0b8358e 206 PRINTS PR01003 Flagellar assembly protein FliH signature 134 161 4.4E-5 T 13-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 BEN78_14525 b66456f813602feb50cea26ad0b8358e 206 PRINTS PR01003 Flagellar assembly protein FliH signature 73 92 4.4E-5 T 13-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 BEN78_14525 b66456f813602feb50cea26ad0b8358e 206 Pfam PF02108 Flagellar assembly protein FliH 73 192 1.1E-19 T 13-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE BEN78_12160 28bfb20157c7cdc53be700a226e183e4 197 Gene3D G3DSA:3.40.30.10 46 188 1.2E-17 T 13-10-2018 BEN78_12160 28bfb20157c7cdc53be700a226e183e4 197 Pfam PF00578 AhpC/TSA family 48 163 8.2E-7 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BEN78_12160 28bfb20157c7cdc53be700a226e183e4 197 SUPERFAMILY SSF52833 41 184 3.29E-20 T 13-10-2018 IPR036249 Thioredoxin-like superfamily BEN78_00695 7f0313f6c1bd1defb77d8af5892b07fe 197 Pfam PF02630 SCO1/SenC 36 176 4.2E-31 T 13-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_00695 7f0313f6c1bd1defb77d8af5892b07fe 197 Gene3D G3DSA:3.40.30.10 33 188 5.6E-46 T 13-10-2018 BEN78_00695 7f0313f6c1bd1defb77d8af5892b07fe 197 SUPERFAMILY SSF52833 39 190 8.04E-41 T 13-10-2018 IPR036249 Thioredoxin-like superfamily BEN78_05345 1ed58084cdb355a62c5a6b1d16aa5a78 459 SUPERFAMILY SSF56935 96 459 5.19E-19 T 13-10-2018 BEN78_05345 1ed58084cdb355a62c5a6b1d16aa5a78 459 Pfam PF02530 Porin subfamily 99 349 7.5E-8 T 13-10-2018 IPR003684 Porin, alpha proteobacteria type GO:0015288|GO:0016020|GO:0055085 BEN78_16145 814c1d1fb1285e8166ed287bb4b7b999 229 Pfam PF13628 Domain of unknown function (DUF4142) 75 224 3.9E-21 T 13-10-2018 IPR025419 Domain of unknown function DUF4142 BEN78_16145 814c1d1fb1285e8166ed287bb4b7b999 229 Gene3D G3DSA:1.20.1260.10 84 225 3.5E-6 T 13-10-2018 IPR012347 Ferritin-like BEN78_08820 d458899ab34bf64832bd4cf03af9a7b8 405 Pfam PF06674 Protein of unknown function (DUF1176) 78 401 2.0E-67 T 13-10-2018 IPR009560 Protein of unknown function DUF1176 BEN78_07160 4e5d44df489bc693c4500eb6c55ff25c 332 Pfam PF13536 Putative multidrug resistance efflux transporter 47 307 5.8E-70 T 13-10-2018 IPR032713 Putative multidrug resistance efflux transporter BEN78_02010 04c7597f52a52270dca2cb50daaf8d17 326 Pfam PF02562 PhoH-like protein 111 314 4.7E-92 T 13-10-2018 IPR003714 PhoH-like protein GO:0005524 BEN78_02010 04c7597f52a52270dca2cb50daaf8d17 326 Gene3D G3DSA:3.40.50.300 108 314 2.8E-69 T 13-10-2018 BEN78_02010 04c7597f52a52270dca2cb50daaf8d17 326 SUPERFAMILY SSF52540 116 289 1.74E-35 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN78_03500 af7145ddd9e98c87e17c72efce8cdc2f 121 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 108 9.9E-23 T 13-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like BEN78_14795 dc32c727027cd7970aa294e97e049218 74 Pfam PF09954 Uncharacterized protein conserved in bacteria (DUF2188) 6 65 8.0E-26 T 13-10-2018 IPR018691 Protein of unknown function DUF2188 BEN78_14255 672b81d000a4e7024cae94d323a9923a 444 Gene3D G3DSA:2.60.120.380 246 337 3.5E-6 T 13-10-2018 BEN78_14255 672b81d000a4e7024cae94d323a9923a 444 Gene3D G3DSA:2.60.120.380 341 443 1.4E-6 T 13-10-2018 BEN78_14255 672b81d000a4e7024cae94d323a9923a 444 Gene3D G3DSA:2.60.120.380 20 131 3.7E-8 T 13-10-2018 BEN78_01605 3f99e107d81f652a537d6a3c9f1c5195 179 Pfam PF06042 Nucleotidyltransferase 14 173 1.4E-52 T 13-10-2018 IPR009267 Putative nucleotidyltransferase BEN78_16375 815ea0fc9a679caa346c136a4ba3476d 189 SUPERFAMILY SSF53955 28 188 5.25E-51 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily BEN78_16375 815ea0fc9a679caa346c136a4ba3476d 189 Pfam PF00182 Chitinase class I 42 150 1.0E-12 T 13-10-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 BEN78_16375 815ea0fc9a679caa346c136a4ba3476d 189 Gene3D G3DSA:1.10.530.70 26 189 4.5E-36 T 13-10-2018 BEN78_08155 55df17abdb2c1ecfadbb26cde2051102 206 Pfam PF11445 Protein of unknown function (DUF2894) 15 174 4.4E-38 T 13-10-2018 IPR021549 Protein of unknown function DUF2894 BEN78_09355 231390561fe5fe94c92d743da5ac2863 522 Pfam PF03929 PepSY-associated TM region 10 362 9.6E-60 T 13-10-2018 IPR005625 PepSY-associated TM protein BEN78_02035 d8c7f3fd2058ffea64add896fc6f9dd4 408 Pfam PF13387 Domain of unknown function (DUF4105) 44 175 2.2E-19 T 13-10-2018 IPR025178 Domain of unknown function DUF4105 BEN78_10395 f341574c0315d2e6c1b77844dc72e5e4 769 Pfam PF07793 Protein of unknown function (DUF1631) 18 753 7.0E-104 T 13-10-2018 IPR012434 Protein of unknown function DUF1631 BEN78_01910 0f036cc1b5285cd955abad8d8fb15a03 352 Pfam PF01497 Periplasmic binding protein 96 317 4.8E-16 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain BEN78_01910 0f036cc1b5285cd955abad8d8fb15a03 352 Gene3D G3DSA:3.40.50.1980 202 344 5.5E-30 T 13-10-2018 BEN78_01910 0f036cc1b5285cd955abad8d8fb15a03 352 SUPERFAMILY SSF53807 87 339 9.81E-29 T 13-10-2018 BEN78_01910 0f036cc1b5285cd955abad8d8fb15a03 352 Gene3D G3DSA:3.40.50.1980 85 201 2.5E-8 T 13-10-2018 BEN78_11435 0121d4e6a733c56af90d07c70066cb77 60 TIGRFAM TIGR04560 ribo_THX: ribosomal small subunit protein bTHX 1 24 4.8E-11 T 13-10-2018 IPR030826 30S ribosomal protein GO:0005840 BEN78_11435 0121d4e6a733c56af90d07c70066cb77 60 Pfam PF17067 Ribosomal protein S31e 2 39 3.1E-7 T 13-10-2018 IPR030826 30S ribosomal protein GO:0005840 BEN78_15290 18142004f4bb8269f72624d95d84a55e 397 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 32 343 1.5E-18 T 13-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 BEN78_15290 18142004f4bb8269f72624d95d84a55e 397 Gene3D G3DSA:3.20.20.80 24 369 2.0E-45 T 13-10-2018 BEN78_15290 18142004f4bb8269f72624d95d84a55e 397 SUPERFAMILY SSF51445 23 367 1.22E-48 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily BEN78_05625 93525e1b5272c689ced670a6f87f2b79 259 Pfam PF01863 Protein of unknown function DUF45 43 244 2.9E-46 T 13-10-2018 IPR002725 Protein of unknown function DUF45 BEN78_05625 93525e1b5272c689ced670a6f87f2b79 259 Gene3D G3DSA:3.30.2010.10 165 242 2.2E-16 T 13-10-2018 BEN78_04780 28b09be19604e0ac2c4e34c6e27d065d 433 SUPERFAMILY SSF50182 185 252 4.58E-11 T 13-10-2018 IPR010920 LSM domain superfamily BEN78_04780 28b09be19604e0ac2c4e34c6e27d065d 433 Pfam PF00924 Mechanosensitive ion channel 146 397 1.3E-44 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 BEN78_10900 815ccd7b80daa1d779f2d7b32943a18c 238 Pfam PF11306 Protein of unknown function (DUF3108) 21 234 6.9E-23 T 13-10-2018 IPR021457 Protein of unknown function DUF3108 BEN78_06190 522371967e97a26844a24835e2f9c76a 94 Pfam PF04380 Membrane fusogenic activity 2 77 2.3E-27 T 13-10-2018 IPR007475 Membrane fusogenic activity BEN78_10730 823313604e9db2653101bea0ce9ff972 155 Pfam PF14467 Domain of unknown function (DUF4426) 43 153 1.2E-14 T 13-10-2018 IPR025218 Domain of unknown function DUF4426 BEN78_10730 823313604e9db2653101bea0ce9ff972 155 Gene3D G3DSA:2.60.40.3340 36 154 7.6E-15 T 13-10-2018 BEN78_15465 3007179072e6888dc791569582e2dc0a 303 Pfam PF01435 Peptidase family M48 125 282 7.0E-32 T 13-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 BEN78_10175 9dda0b6ee93e505aef2bac5ea238390b 223 SUPERFAMILY SSF88946 22 89 2.04E-7 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BEN78_07600 db0430ccfcc3052dd53dc7fb1afade3c 440 Pfam PF07690 Major Facilitator Superfamily 40 381 6.8E-16 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN78_07600 db0430ccfcc3052dd53dc7fb1afade3c 440 Gene3D G3DSA:1.20.1250.20 12 208 1.9E-11 T 13-10-2018 BEN78_07600 db0430ccfcc3052dd53dc7fb1afade3c 440 SUPERFAMILY SSF103473 24 425 1.06E-32 T 13-10-2018 IPR036259 MFS transporter superfamily BEN78_07600 db0430ccfcc3052dd53dc7fb1afade3c 440 Gene3D G3DSA:1.20.1250.20 235 425 5.1E-12 T 13-10-2018 BEN78_06805 14b266845d0029ebb8886116a0ca6fa7 192 SUPERFAMILY SSF56935 16 128 2.38E-9 T 13-10-2018 BEN78_06805 14b266845d0029ebb8886116a0ca6fa7 192 Gene3D G3DSA:2.40.160.10 16 132 7.8E-10 T 13-10-2018 IPR023614 Porin domain superfamily BEN78_04010 27df1c2a4b9a573d4f4884f3525fa2a8 442 Pfam PF02687 FtsX-like permease family 346 435 1.8E-9 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BEN78_04010 27df1c2a4b9a573d4f4884f3525fa2a8 442 Pfam PF12704 MacB-like periplasmic core domain 21 222 1.4E-14 T 13-10-2018 IPR025857 MacB-like periplasmic core domain BEN78_10925 c033858771540edfe83b5a0ec7ae34d1 392 Pfam PF01594 AI-2E family transporter 20 350 4.3E-61 T 13-10-2018 IPR002549 Transmembrane protein TqsA-like BEN78_04995 fa321c20f5d7fa84b324ee7133f1b292 454 Pfam PF13440 Polysaccharide biosynthesis protein 30 327 1.1E-21 T 13-10-2018 BEN78_10575 22abe2748d57523cdde6f1e9e39112c8 659 Pfam PF05170 AsmA family 31 149 2.7E-15 T 13-10-2018 IPR007844 AsmA BEN78_10575 22abe2748d57523cdde6f1e9e39112c8 659 Pfam PF05170 AsmA family 223 558 8.3E-41 T 13-10-2018 IPR007844 AsmA BEN78_09705 687ede5f3d85b953efe0ee0facdcdb59 405 Pfam PF05990 Alpha/beta hydrolase of unknown function (DUF900) 122 224 7.8E-5 T 13-10-2018 IPR010297 Protein of unknown function DUF900, hydrolase-like BEN78_04830 904895005c3eb7809a362f2e139274c4 108 Pfam PF14216 Domain of unknown function (DUF4326) 28 94 3.9E-19 T 13-10-2018 IPR025475 Protein of unknown function DUF4326) BEN78_07515 6fcf84739f02ee243122ea437563d540 617 Pfam PF05569 BlaR1 peptidase M56 13 290 1.7E-55 T 13-10-2018 IPR008756 Peptidase M56 BEN78_07005 ff442a07562672cf6d27b627f7058f58 477 Gene3D G3DSA:1.20.120.20 93 232 8.5E-7 T 13-10-2018 BEN78_07005 ff442a07562672cf6d27b627f7058f58 477 Pfam PF02646 RmuC family 172 457 5.2E-77 T 13-10-2018 IPR003798 DNA recombination RmuC BEN78_07005 ff442a07562672cf6d27b627f7058f58 477 SUPERFAMILY SSF58113 49 213 3.66E-6 T 13-10-2018 BEN78_01820 e2d0bd1b811cf8ed2537f6b9bc2f0c87 147 PIRSF PIRSF015875 1 147 1.9E-49 T 13-10-2018 IPR007418 Protein of unknown function DUF474 BEN78_04005 35c3e7437519bfb3501169b33845adee 407 Pfam PF12704 MacB-like periplasmic core domain 77 252 1.7E-9 T 13-10-2018 IPR025857 MacB-like periplasmic core domain BEN78_04005 35c3e7437519bfb3501169b33845adee 407 Pfam PF02687 FtsX-like permease family 314 396 9.4E-8 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BEN78_02600 e621d40e1dd3a967ce189a29a0c07a48 511 Gene3D G3DSA:3.60.110.10 254 473 5.3E-26 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily BEN78_02600 e621d40e1dd3a967ce189a29a0c07a48 511 SUPERFAMILY SSF56317 265 465 2.62E-32 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily BEN78_02600 e621d40e1dd3a967ce189a29a0c07a48 511 Pfam PF00795 Carbon-nitrogen hydrolase 270 437 8.2E-12 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 BEN78_06785 17025feacbca60a11b4f2fcf3191b193 103 Pfam PF13698 Domain of unknown function (DUF4156) 22 101 3.6E-10 T 13-10-2018 IPR025294 Protein of unknown function DUF4156 BEN78_01940 29af6052fe2a1c297ff51ab7c9047194 93 Gene3D G3DSA:2.20.25.10 8 91 2.0E-29 T 13-10-2018 BEN78_01940 29af6052fe2a1c297ff51ab7c9047194 93 SUPERFAMILY SSF158997 2 79 3.01E-10 T 13-10-2018 BEN78_01940 29af6052fe2a1c297ff51ab7c9047194 93 Pfam PF03966 Trm112p-like protein 2 68 4.0E-9 T 13-10-2018 IPR005651 Trm112-like BEN78_07995 88a550093270a85114ab7bef1b799b90 887 Gene3D G3DSA:2.40.170.20 561 887 6.9E-48 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_07995 88a550093270a85114ab7bef1b799b90 887 Gene3D G3DSA:2.40.170.20 50 503 7.6E-62 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BEN78_07995 88a550093270a85114ab7bef1b799b90 887 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 164 2.1E-7 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain BEN78_07995 88a550093270a85114ab7bef1b799b90 887 SUPERFAMILY SSF56935 37 887 3.43E-82 T 13-10-2018 BEN78_07995 88a550093270a85114ab7bef1b799b90 887 Pfam PF00593 TonB dependent receptor 289 885 3.3E-25 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BEN78_14785 b7d66730eb42d3a4d92bc80cf9012002 289 Pfam PF06114 IrrE N-terminal-like domain 30 153 7.9E-16 T 13-10-2018 IPR010359 IrrE N-terminal-like domain BEN78_14785 b7d66730eb42d3a4d92bc80cf9012002 289 Gene3D G3DSA:3.40.390.50 2 116 1.5E-11 T 13-10-2018 BEN78_16140 3b1cef978420e86664d4d6c50e2c8671 186 Pfam PF04343 Protein of unknown function, DUF488 16 135 4.2E-29 T 13-10-2018 IPR007438 Protein of unknown function DUF488 BEN78_16140 3b1cef978420e86664d4d6c50e2c8671 186 PIRSF PIRSF024492 2 183 2.1E-55 T 13-10-2018 IPR014519 Uncharacterised conserved protein UCP024492 BEN78_13880 5c8602b4d0793dfd78fa4cf4cd1777e9 199 Pfam PF07027 Protein of unknown function (DUF1318) 104 199 2.7E-19 T 13-10-2018 IPR008309 Uncharacterised conserved protein UCP025560 BEN78_01965 44469d4ebdfe3b2901814d596e00af6f 247 Gene3D G3DSA:1.10.760.10 31 212 1.5E-27 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BEN78_01965 44469d4ebdfe3b2901814d596e00af6f 247 SUPERFAMILY SSF46626 33 211 6.26E-48 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BEN78_01965 44469d4ebdfe3b2901814d596e00af6f 247 PRINTS PR00603 Cytochrome C1 signature 47 66 6.1E-8 T 13-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 BEN78_01965 44469d4ebdfe3b2901814d596e00af6f 247 PRINTS PR00603 Cytochrome C1 signature 193 212 6.1E-8 T 13-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 BEN78_01965 44469d4ebdfe3b2901814d596e00af6f 247 PRINTS PR00603 Cytochrome C1 signature 212 227 6.1E-8 T 13-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 BEN78_01965 44469d4ebdfe3b2901814d596e00af6f 247 Pfam PF02167 Cytochrome C1 family 39 246 1.9E-26 T 13-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 BEN78_00190 aa56ee02689e732308918c6037ef4365 468 Pfam PF07995 Glucose / Sorbosone dehydrogenase 202 361 3.6E-9 T 13-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase BEN78_00190 aa56ee02689e732308918c6037ef4365 468 Gene3D G3DSA:2.120.10.30 70 435 2.2E-12 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BEN78_00190 aa56ee02689e732308918c6037ef4365 468 SUPERFAMILY SSF50952 64 435 7.19E-40 T 13-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 BEN78_12570 8b28d6a6bf9e269959325a4dace98292 147 Gene3D G3DSA:2.40.128.520 29 147 4.8E-17 T 13-10-2018 BEN78_12570 8b28d6a6bf9e269959325a4dace98292 147 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 31 146 2.8E-31 T 13-10-2018 IPR019223 Domain of unknown function DUF2147 BEN78_04205 97ee92cb3ffa674adc48327972d3983a 200 Pfam PF01965 DJ-1/PfpI family 3 177 8.1E-23 T 13-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 BEN78_04205 97ee92cb3ffa674adc48327972d3983a 200 Gene3D G3DSA:3.40.50.880 1 199 1.1E-63 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN78_04205 97ee92cb3ffa674adc48327972d3983a 200 SUPERFAMILY SSF52317 1 197 1.13E-50 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN78_15280 4c2d261c36232db10512b6df0663dc01 195 SUPERFAMILY SSF53448 14 187 2.39E-15 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_15280 4c2d261c36232db10512b6df0663dc01 195 Pfam PF12804 MobA-like NTP transferase domain 14 164 4.7E-19 T 13-10-2018 IPR025877 MobA-like NTP transferase BEN78_15280 4c2d261c36232db10512b6df0663dc01 195 Gene3D G3DSA:3.90.550.10 7 191 7.2E-34 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN78_10380 9e05b4b976496734dbb97dfe9900657a 188 SUPERFAMILY SSF55811 13 159 5.55E-29 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BEN78_10380 9e05b4b976496734dbb97dfe9900657a 188 Gene3D G3DSA:3.90.79.10 11 181 5.8E-34 T 13-10-2018 BEN78_10380 9e05b4b976496734dbb97dfe9900657a 188 Pfam PF00293 NUDIX domain 40 108 8.7E-9 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BEN78_05695 02a36a08bb8782513a0853da7461a92a 1304 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 971 1303 3.6E-51 T 13-10-2018 IPR007452 Translocation and assembly module TamB BEN78_06130 edf2684e3722233cec42ad1aa292bd5d 241 Pfam PF01925 Sulfite exporter TauE/SafE 2 234 1.1E-35 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 BEN78_16295 e635cc68ff2f84b64a623a4d92727dbe 122 SMART SM00507 26 81 0.0026 T 13-10-2018 IPR003615 HNH nuclease BEN78_16295 e635cc68ff2f84b64a623a4d92727dbe 122 Pfam PF01844 HNH endonuclease 38 86 8.7E-10 T 13-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 BEN78_01815 a6b0960be3627880e43404fcc0fcfb4d 761 SUPERFAMILY SSF81442 276 749 1.57E-75 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_01815 a6b0960be3627880e43404fcc0fcfb4d 761 Gene3D G3DSA:1.20.210.10 221 751 1.9E-167 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_01815 a6b0960be3627880e43404fcc0fcfb4d 761 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 282 724 3.9E-68 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_08660 885d48eb5c2ed59fa5afbcdae89ec582 261 Gene3D G3DSA:3.30.1450.10 64 145 2.1E-9 T 13-10-2018 IPR037873 BamE-like BEN78_08660 885d48eb5c2ed59fa5afbcdae89ec582 261 Pfam PF04355 SmpA / OmlA family 65 134 5.1E-11 T 13-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 BEN78_08170 c0a44885c3a93d68745c2f6278e248d8 244 Pfam PF11828 Protein of unknown function (DUF3348) 16 242 5.8E-73 T 13-10-2018 IPR021783 Protein of unknown function DUF3348 BEN78_04165 a413c476a1022b0418a3d51eb76ed89a 304 SUPERFAMILY SSF103481 52 147 3.27E-15 T 13-10-2018 BEN78_04165 a413c476a1022b0418a3d51eb76ed89a 304 Pfam PF00892 EamA-like transporter family 13 144 3.8E-14 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BEN78_04165 a413c476a1022b0418a3d51eb76ed89a 304 Pfam PF00892 EamA-like transporter family 157 283 1.3E-12 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BEN78_04165 a413c476a1022b0418a3d51eb76ed89a 304 SUPERFAMILY SSF103481 188 288 6.54E-13 T 13-10-2018 BEN78_10650 c24b98a68b36f4e0cf8ff39bd35d0c28 334 TIGRFAM TIGR04122 Xnuc_lig_assoc: putative exonuclease, DNA ligase-associated 9 333 7.7E-144 T 13-10-2018 IPR026360 Putative exonuclease, DNA ligase-associated BEN78_10650 c24b98a68b36f4e0cf8ff39bd35d0c28 334 SUPERFAMILY SSF56281 15 326 1.9E-54 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN78_10650 c24b98a68b36f4e0cf8ff39bd35d0c28 334 Gene3D G3DSA:3.60.15.10 65 198 2.5E-15 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN78_06095 faa361d8bdba1d52072d2d981c10b6dc 189 Pfam PF06693 Protein of unknown function (DUF1190) 30 187 2.8E-28 T 13-10-2018 IPR009576 Biofilm formation YgiB BEN78_02070 52d18215a3418609e3e67dddb75093a2 419 Pfam PF05684 Protein of unknown function (DUF819) 21 415 1.2E-113 T 13-10-2018 IPR008537 Protein of unknown function DUF819 BEN78_11735 fef1eb748bbc378a7558377e9a1df93c 309 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 50 275 1.9E-50 T 13-10-2018 IPR018713 Domain of unknown function DUF2236 BEN78_08840 3e73a8ea3a71630f82a2bc644822545e 248 Pfam PF04493 Endonuclease V 40 233 1.3E-68 T 13-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 BEN78_08840 3e73a8ea3a71630f82a2bc644822545e 248 Hamap MF_00801 Endonuclease V [nfi]. 29 242 34.466 T 13-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 BEN78_08840 3e73a8ea3a71630f82a2bc644822545e 248 Gene3D G3DSA:3.30.2170.10 28 240 1.1E-73 T 13-10-2018 BEN78_05160 bae38d3d95ffad795cd1fc246012990a 361 Pfam PF10005 zinc-ribbon domain 3 94 7.0E-33 T 13-10-2018 IPR011201 Zinc-ribbon domain, bacteria BEN78_05160 bae38d3d95ffad795cd1fc246012990a 361 Pfam PF15887 Putative zinc-binding metallo-peptidase 99 347 2.1E-107 T 13-10-2018 IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase BEN78_05160 bae38d3d95ffad795cd1fc246012990a 361 PIRSF PIRSF012641 1 360 8.0E-147 T 13-10-2018 IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase BEN78_13605 0f13a64fc33fa8048f91319537eb5959 283 Gene3D G3DSA:2.160.20.120 167 279 1.3E-8 T 13-10-2018 BEN78_16075 56b4be9b213cb4ae6e54871ba612aa49 240 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 10 212 5.6E-45 T 13-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain BEN78_08790 edcfe1ce2184646c7cfc6446331b0146 66 Pfam PF11278 Protein of unknown function (DUF3079) 1 49 2.9E-31 T 13-10-2018 IPR021430 Protein of unknown function DUF3079 BEN78_16815 5f8da56da7ecfcf064a9a55b1e1185a7 229 Pfam PF00648 Calpain family cysteine protease 68 218 1.1E-5 T 13-10-2018 IPR001300 Peptidase C2, calpain, catalytic domain GO:0004198|GO:0005622|GO:0006508 Reactome: R-HSA-1474228 BEN78_16815 5f8da56da7ecfcf064a9a55b1e1185a7 229 SUPERFAMILY SSF54001 2 208 8.05E-13 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BEN78_08595 b33b2bacd68abe7ba00ea80c3a6c18d4 402 Pfam PF00487 Fatty acid desaturase 17 228 1.7E-11 T 13-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 BEN78_08240 5e42372e70af3229d7d8428eedbf0abd 209 Pfam PF11655 Protein of unknown function (DUF2589) 16 195 8.6E-49 T 13-10-2018 IPR024510 Protein of unknown function DUF2589 BEN78_08240 5e42372e70af3229d7d8428eedbf0abd 209 ProDom PD104924 XAC1607 AF0417 8 205 3.0E-68 T 13-10-2018 BEN78_01805 bd3ba171506553df141215ff46617b89 413 Pfam PF05940 NnrS protein 19 407 1.7E-52 T 13-10-2018 IPR010266 NnrS BEN78_06345 f58490ac076cd984e635dcf174eda7ec 233 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 133 221 4.3E-7 T 13-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 BEN78_06390 6f19694a5d139892a71ac50d3fc695ad 136 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 134 7.9E-26 T 13-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 BEN78_10335 d3a670c8b31bdcb0837300f2db6b0b53 310 SUPERFAMILY SSF103481 213 299 8.11E-11 T 13-10-2018 BEN78_10335 d3a670c8b31bdcb0837300f2db6b0b53 310 Pfam PF00892 EamA-like transporter family 152 294 1.6E-13 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BEN78_10335 d3a670c8b31bdcb0837300f2db6b0b53 310 Pfam PF00892 EamA-like transporter family 12 139 9.3E-11 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BEN78_10335 d3a670c8b31bdcb0837300f2db6b0b53 310 SUPERFAMILY SSF103481 41 142 3.01E-14 T 13-10-2018 BEN78_16120 c5c8bac0475794f7bca9d98dcf4d77f4 155 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 9 154 31.462 T 13-10-2018 IPR003791 Protein of unknown function UPF0178 BEN78_16120 c5c8bac0475794f7bca9d98dcf4d77f4 155 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 25 152 5.8E-48 T 13-10-2018 IPR003791 Protein of unknown function UPF0178 BEN78_05085 adf8b2cd33cf4206df2ee8d39c46516e 421 Pfam PF07804 HipA-like C-terminal domain 168 381 2.3E-48 T 13-10-2018 IPR012893 HipA-like, C-terminal BEN78_15400 7690c79cd66b5ff16e7d215f76666055 221 SUPERFAMILY SSF48576 24 100 5.75E-6 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily BEN78_05620 52b086eafaa6c0e8932576c60c7b17f4 300 Pfam PF04381 Putative exonuclease, RdgC 1 295 5.8E-99 T 13-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 BEN78_05620 52b086eafaa6c0e8932576c60c7b17f4 300 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 299 36.176 T 13-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 BEN78_06160 a757d1cd116d411c1daf8193bccb45a3 618 Pfam PF01435 Peptidase family M48 146 332 2.9E-16 T 13-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 BEN78_03485 84d9c70d829443d367afa78af2d076f3 164 Pfam PF06127 Protein of unknown function (DUF962) 11 159 5.7E-24 T 13-10-2018 IPR009305 Protein of unknown function DUF962 BEN78_09395 69237cb73df2ea4d4155f0657ee63363 212 Pfam PF10741 Type II secretion system (T2SS), protein M subtype b 78 191 2.2E-25 T 13-10-2018 IPR034756 Type II secretion system (T2SS), protein M subtype b BEN78_08085 c406812aa0964c54b3701fcaa25b044c 162 Pfam PF10756 Bacterial PH domain 68 101 2.7E-6 T 13-10-2018 IPR019692 Protein of unknown function DUF2581 BEN78_06400 c36f635258654b3ff2fbcf998eaa4ea1 251 Pfam PF01618 MotA/TolQ/ExbB proton channel family 107 225 1.5E-36 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel BEN78_16500 8bcfb6f939050836819f619769c2dbd0 301 Pfam PF06189 5'-nucleotidase 38 299 3.2E-108 T 13-10-2018 IPR010394 5-nucleotidase GO:0000166|GO:0000287|GO:0005737|GO:0008253|GO:0009117 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821|Reactome: R-HSA-74259 BEN78_13650 a8d1f82932efc6e0ab504d4c8cd9465a 80 Pfam PF04102 SlyX 14 80 6.6E-18 T 13-10-2018 IPR007236 SlyX BEN78_13650 a8d1f82932efc6e0ab504d4c8cd9465a 80 Hamap MF_00715 Protein SlyX [slyX]. 13 80 14.605 T 13-10-2018 IPR007236 SlyX BEN78_13650 a8d1f82932efc6e0ab504d4c8cd9465a 80 Gene3D G3DSA:1.20.5.300 1 60 4.8E-13 T 13-10-2018 BEN78_13705 86332f96e6972c0cb7a9f73c19fe7ca9 616 Pfam PF13387 Domain of unknown function (DUF4105) 243 411 2.4E-29 T 13-10-2018 IPR025178 Domain of unknown function DUF4105 BEN78_13875 c61e6053726aae769d174b699876eb31 678 Pfam PF05359 Domain of Unknown Function (DUF748) 126 202 9.3E-6 T 13-10-2018 IPR008023 Protein of unknown function DUF748 BEN78_09655 aeedc1fc4f19e831ad644f3049505530 388 Pfam PF10933 Protein of unknown function (DUF2827) 3 376 1.1E-75 T 13-10-2018 IPR021234 Protein of unknown function DUF2827 BEN78_03940 9c16468931114f591c7817e22a997b9a 416 Pfam PF09983 Uncharacterized protein conserved in bacteria C-term(DUF2220) 238 392 3.0E-16 T 13-10-2018 IPR024534 Domain of unknown function DUF2220 BEN78_16790 4dee372bd462eb6967a5b12f04a92172 172 Pfam PF02620 Uncharacterized ACR, COG1399 62 167 5.5E-11 T 13-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD BEN78_04295 1ab181f29e58f651456b39b19879c37f 669 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 27 508 1.3E-200 T 13-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 BEN78_04295 1ab181f29e58f651456b39b19879c37f 669 ProSitePatterns PS01303 BCCT family of transporters signature. 327 336 - T 13-10-2018 IPR018093 BCCT transporter, conserved site BEN78_04295 1ab181f29e58f651456b39b19879c37f 669 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 65 508 1.9E-165 T 13-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 BEN78_00230 3d7f89370d87135cd5480e603c92cb6e 414 Pfam PF11153 Protein of unknown function (DUF2931) 73 263 2.3E-7 T 13-10-2018 IPR021326 Protein of unknown function DUF2931 BEN78_06760 5ba5a2cfb34e20a94e909c79e244ca49 142 Pfam PF03692 Putative zinc- or iron-chelating domain 4 96 3.3E-11 T 13-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein BEN78_01045 92d8a6185b2ef371b9a51572f4d6ce19 147 Pfam PF09685 Domain of unknown function (DUF4870) 16 146 3.9E-25 T 13-10-2018 IPR019109 Protein of unknown function DUF4870 BEN78_11590 3619f5a12a74cc8659300827ec7aca13 414 Pfam PF09972 Predicted membrane protein (DUF2207) 2 352 7.5E-26 T 13-10-2018 IPR018702 Protein of unknown function DUF2207, membrane BEN78_06015 55f22cf8110622a3e79ee7608db2289f 340 Pfam PF14094 Domain of unknown function (DUF4272) 130 336 1.0E-61 T 13-10-2018 IPR025368 Protein of unknown function DUF4272 BEN78_12145 40189518173c81a720c77fb83a28f962 182 SUPERFAMILY SSF81342 7 179 2.59E-23 T 13-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 BEN78_12145 40189518173c81a720c77fb83a28f962 182 Pfam PF01292 Prokaryotic cytochrome b561 11 179 4.9E-21 T 13-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 BEN78_12720 44441897638c2909c3bbce9ecc1c6d53 237 Pfam PF04338 Protein of unknown function, DUF481 32 237 1.6E-57 T 13-10-2018 IPR007433 Protein of unknown function DUF481 BEN78_03255 87ee51302f57d53c46c42e82ba3df7b9 308 Pfam PF02470 MlaD protein 48 115 8.0E-12 T 13-10-2018 IPR003399 Mce/MlaD BEN78_08165 18ef6ba56ba63d6d018406045819d127 783 Gene3D G3DSA:1.20.5.1230 277 472 8.4E-10 T 13-10-2018 BEN78_08165 18ef6ba56ba63d6d018406045819d127 783 Pfam PF05650 Domain of unknown function (DUF802) 410 462 3.3E-15 T 13-10-2018 IPR008520 Domain of unknown function DUF802 BEN78_08165 18ef6ba56ba63d6d018406045819d127 783 Pfam PF05650 Domain of unknown function (DUF802) 326 378 3.2E-14 T 13-10-2018 IPR008520 Domain of unknown function DUF802 BEN78_08165 18ef6ba56ba63d6d018406045819d127 783 Pfam PF05650 Domain of unknown function (DUF802) 465 517 8.6E-14 T 13-10-2018 IPR008520 Domain of unknown function DUF802 BEN78_06315 ee3c26adb600e5a588193d736a5daa94 400 SUPERFAMILY SSF55874 294 399 2.05E-10 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_06315 ee3c26adb600e5a588193d736a5daa94 400 Gene3D G3DSA:3.30.565.10 281 400 1.5E-22 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN78_06315 ee3c26adb600e5a588193d736a5daa94 400 Pfam PF07730 Histidine kinase 215 277 1.0E-12 T 13-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 BEN78_14865 09101f7755721f9cee45d1a80ca975c1 168 Pfam PF06853 Protein of unknown function (DUF1249) 30 145 8.6E-25 T 13-10-2018 IPR009659 Protein of unknown function DUF1249 BEN78_08275 5c1460461a202d4af90a0c80ae7e9d11 203 Pfam PF10755 Protein of unknown function (DUF2585) 44 190 8.1E-42 T 13-10-2018 IPR019691 Protein of unknown function DUF2585 GO:0005886 BEN78_13295 8e4616639a7d667c7c04ea4f178dbfd0 317 Pfam PF01882 Protein of unknown function DUF58 209 282 6.1E-13 T 13-10-2018 IPR002881 Domain of unknown function DUF58 BEN78_04860 dcde3754d78630807a5f800608ab5f39 399 Pfam PF02628 Cytochrome oxidase assembly protein 22 129 5.9E-22 T 13-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 BEN78_04860 dcde3754d78630807a5f800608ab5f39 399 Pfam PF02628 Cytochrome oxidase assembly protein 152 389 2.2E-42 T 13-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 BEN78_02450 81b0b3cbb9cace486161760fc1bcb042 266 Hamap MF_00443 Thiazole synthase [thiG]. 11 266 43.139 T 13-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 BEN78_02450 81b0b3cbb9cace486161760fc1bcb042 266 SUPERFAMILY SSF110399 12 252 6.93E-90 T 13-10-2018 BEN78_02450 81b0b3cbb9cace486161760fc1bcb042 266 Pfam PF05690 Thiazole biosynthesis protein ThiG 14 260 3.3E-113 T 13-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 BEN78_02450 81b0b3cbb9cace486161760fc1bcb042 266 Gene3D G3DSA:3.20.20.70 3 266 1.2E-121 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN78_07010 cf4bf10c5a85985a5c66798491a3811e 369 SUPERFAMILY SSF53474 44 365 1.52E-13 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN78_02970 479ad29d8bb392cc1a4092d40836c8e8 308 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 11 289 1.6E-41 T 13-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 BEN78_02970 479ad29d8bb392cc1a4092d40836c8e8 308 PIRSF PIRSF026649 1 299 5.7E-75 T 13-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 BEN78_06960 56cbf6badb2af7b537d9c77670b39082 354 Pfam PF13387 Domain of unknown function (DUF4105) 140 292 8.2E-47 T 13-10-2018 IPR025178 Domain of unknown function DUF4105 BEN78_08980 414cc9d34f58b9f4fdd332202284b6cb 388 Pfam PF12704 MacB-like periplasmic core domain 24 231 2.6E-9 T 13-10-2018 IPR025857 MacB-like periplasmic core domain BEN78_08980 414cc9d34f58b9f4fdd332202284b6cb 388 Pfam PF02687 FtsX-like permease family 291 380 2.5E-8 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BEN78_15780 f8ee9b547923f714a228eb21bb63b71b 117 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 9 100 4.4E-8 T 13-10-2018 IPR039366 YscW/ExsB BEN78_10435 0e7c93740e15fd7895bc332c53f3c2e1 249 Pfam PF01925 Sulfite exporter TauE/SafE 13 242 2.6E-32 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 BEN78_16160 de52498157290bd2e4b4844e237804a3 427 Pfam PF01757 Acyltransferase family 8 331 1.1E-12 T 13-10-2018 IPR002656 Acyltransferase 3 GO:0016747 BEN78_06170 0deeb26f5af1b74c6daa9f59a91bc065 104 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 4 99 1.4E-8 T 13-10-2018 IPR008407 Branched-chain amino acid transport, AzlD BEN78_09425 ef272b95e437befc17a66a2a1282b52d 247 Pfam PF12412 Protein of unknown function (DUF3667) 34 75 1.9E-11 T 13-10-2018 IPR022134 Protein of unknown function DUF3667 BEN78_10610 b5e4cf5b77d6b2eb1c416abc1763f79f 217 Pfam PF07481 Domain of Unknown Function (DUF1521) 6 156 3.9E-33 T 13-10-2018 IPR011086 Domain of unknown function DUF1521 BEN78_12980 c83891bed7ed62d4bc322bd6cac1e3c7 213 Pfam PF01618 MotA/TolQ/ExbB proton channel family 68 187 1.1E-27 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel BEN78_16435 00862ddffeb5b76c6dd8676381b66eeb 154 Pfam PF04657 Putative inner membrane exporter, YdcZ 9 145 6.3E-37 T 13-10-2018 IPR006750 Putative inner membrane exporter, YdcZ BEN78_09660 59bf5b3150d61570ca9308f6f92e98c3 377 Pfam PF10933 Protein of unknown function (DUF2827) 14 372 5.7E-137 T 13-10-2018 IPR021234 Protein of unknown function DUF2827 BEN78_03195 2b54f101a1687417246c58d5c06b0cae 363 Gene3D G3DSA:1.10.10.10 110 177 3.6E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN78_03195 2b54f101a1687417246c58d5c06b0cae 363 SUPERFAMILY SSF88659 127 172 1.21E-5 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN78_10320 2b42bd8ea83a6fbd120877427180f77d 183 Pfam PF02517 CAAX protease self-immunity 82 172 2.6E-16 T 13-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 BEN78_06975 3e0c213a7a09793579dc5822fe2c81e3 247 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 4 247 1.4E-66 T 13-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria BEN78_06975 3e0c213a7a09793579dc5822fe2c81e3 247 Pfam PF02405 Permease MlaE 33 243 2.2E-63 T 13-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 BEN78_14775 56d94f925bc31f2fe80cf4db61958674 141 Pfam PF13511 Domain of unknown function (DUF4124) 17 52 8.3E-6 T 13-10-2018 IPR025392 Domain of unknown function DUF4124 BEN78_10445 1338fc84ccefe0e656c9a7d7d2723b60 155 Pfam PF10027 Predicted integral membrane protein (DUF2269) 5 153 3.3E-58 T 13-10-2018 IPR018729 Protein of unknown function DUF2269, transmembrane BEN78_04340 c72b1f8cb96684681b374f2a01deccbc 333 Pfam PF01944 Stage II sporulation protein M 118 297 4.7E-31 T 13-10-2018 IPR002798 Stage II sporulation protein M-like BEN78_14430 5a372868845fa0acb438c167a8f2021a 246 Pfam PF01618 MotA/TolQ/ExbB proton channel family 102 215 1.8E-24 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel BEN78_03190 4da415411151b0765e3eda17f6784317 209 Pfam PF11304 Protein of unknown function (DUF3106) 32 115 6.1E-14 T 13-10-2018 IPR021455 Protein of unknown function DUF3106 BEN78_03385 d4d62eb519c09a18c96bb834853daaf1 244 Pfam PF10014 2OG-Fe dioxygenase 48 234 8.9E-63 T 13-10-2018 IPR018724 2OG-Fe dioxygenase BEN78_03385 d4d62eb519c09a18c96bb834853daaf1 244 Gene3D G3DSA:2.60.120.620 5 243 1.5E-82 T 13-10-2018 BEN78_08280 292c2a5023943f91041181de74f2a59f 170 Pfam PF04116 Fatty acid hydroxylase superfamily 11 145 9.7E-11 T 13-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 BEN78_05745 1377762a99463bb3a6b76347c5fe9625 260 Pfam PF01925 Sulfite exporter TauE/SafE 6 257 3.9E-46 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 BEN78_06325 8775bb00443fb92a362ac1b393f46c7f 504 Pfam PF03055 Retinal pigment epithelial membrane protein 52 501 2.4E-79 T 13-10-2018 IPR004294 Carotenoid oxygenase GO:0016702|GO:0055114 BEN78_04030 3103f0377b6af8de40d8e62ab80ae4b7 99 Pfam PF01402 Ribbon-helix-helix protein, copG family 9 46 1.2E-6 T 13-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 BEN78_07370 739d57a125eff49a86d2c7b9151bf1cc 618 Pfam PF07944 Beta-L-arabinofuranosidase, GH127 42 530 5.2E-77 T 13-10-2018 IPR012878 Beta-L-arabinofuranosidase, GH127 BEN78_07370 739d57a125eff49a86d2c7b9151bf1cc 618 SUPERFAMILY SSF48208 46 356 5.92E-15 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BEN78_12590 633722bb0d0e0adf037a4ca5641a1185 169 Pfam PF06271 RDD family 23 162 2.3E-20 T 13-10-2018 IPR010432 RDD BEN78_05980 49867a81d18612c96572aa9b32b6b7b8 184 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 6 184 7.3E-53 T 13-10-2018 IPR018636 Protein of unknown function DUF2058 BEN78_04180 0d45b6ce7a519b16e72f7f0af1617f84 384 Pfam PF07786 Protein of unknown function (DUF1624) 11 218 2.3E-16 T 13-10-2018 IPR012429 Domain of unknown function DUF1624 Reactome: R-HSA-2024096|Reactome: R-HSA-2206291|Reactome: R-HSA-6798695 BEN78_16275 d03b80668f5df06dc1437861d301d86b 314 Pfam PF08378 Nuclease-related domain 146 257 2.8E-14 T 13-10-2018 IPR011528 Nuclease-related domain, NERD BEN78_15170 d17b60de3095dda4678836d43203d96a 226 Pfam PF13471 Transglutaminase-like superfamily 112 224 1.1E-16 T 13-10-2018 IPR032708 Microcin J25-processing protein McjB, C-terminal BEN78_04870 20e596b67ef67f34c575284e6fdd0e07 245 Pfam PF02104 SURF1 family 17 229 7.8E-26 T 13-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN78_03185 acf98d0a86be8ff0d92eb1c368713e44 392 Pfam PF12412 Protein of unknown function (DUF3667) 74 117 2.3E-15 T 13-10-2018 IPR022134 Protein of unknown function DUF3667 BEN78_08665 fc28df171317d14b52216c3fee1aeae0 388 Pfam PF10933 Protein of unknown function (DUF2827) 3 376 2.0E-75 T 13-10-2018 IPR021234 Protein of unknown function DUF2827 BEN78_11430 d623789b67b99e4c3f3931836ef065bd 131 Pfam PF03203 MerC mercury resistance protein 12 123 4.3E-25 T 13-10-2018 IPR004891 Mercury transport protein MerC GO:0015097|GO:0015694|GO:0016020 BEN78_05025 ba8e210f5d6c68962043d71e715171c9 229 Pfam PF02397 Bacterial sugar transferase 3 196 8.0E-48 T 13-10-2018 IPR003362 Bacterial sugar transferase BEN78_06060 1a734502c2911f107089a0fa75a17710 339 Pfam PF13303 Phosphotransferase system, EIIC 21 335 1.0E-96 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BEN78_00930 2f686608c8eadfdf8d38491d010885e8 149 Gene3D G3DSA:3.30.450.20 11 121 8.4E-6 T 13-10-2018 BEN78_01725 edc3329cd8f0a1a2797dd391cca8164e 342 Pfam PF01963 TraB family 57 340 1.2E-23 T 13-10-2018 IPR002816 Pheromone shutdown, TraB BEN78_10920 86f89ca40dd4cc0e23f8a91fbe64688e 352 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 29 262 4.4E-63 T 13-10-2018 IPR018642 Protein of unknown function DUF2066