locus-tag class description CAI14_00005 PF00213 ATP synthase delta (OSCP) subunit CAI14_00010 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CAI14_00010 PF00306 ATP synthase alpha/beta chain, C terminal domain CAI14_00010 PF02874 ATP synthase alpha/beta family, beta-barrel domain CAI14_00015 PF00231 ATP synthase CAI14_00020 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CAI14_00020 PF02874 ATP synthase alpha/beta family, beta-barrel domain CAI14_00025 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CAI14_00025 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CAI14_00040 PF00132 Bacterial transferase hexapeptide (six repeats) CAI14_00040 PF14602 Hexapeptide repeat of succinyl-transferase CAI14_00040 PF12804 MobA-like NTP transferase domain CAI14_00045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_00045 PF00512 His Kinase A (phospho-acceptor) domain CAI14_00050 PF00158 Sigma-54 interaction domain CAI14_00050 PF02954 Bacterial regulatory protein, Fis family CAI14_00050 PF00072 Response regulator receiver domain CAI14_00060 PF02687 FtsX-like permease family CAI14_00060 PF12704 MacB-like periplasmic core domain CAI14_00065 PF02687 FtsX-like permease family CAI14_00065 PF12704 MacB-like periplasmic core domain CAI14_00070 PF00005 ABC transporter CAI14_00070 PF02687 FtsX-like permease family CAI14_00070 PF12704 MacB-like periplasmic core domain CAI14_00075 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CAI14_00080 PF01380 SIS domain CAI14_00110 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CAI14_00115 PF05275 Copper resistance protein B precursor (CopB) CAI14_00120 PF07732 Multicopper oxidase CAI14_00120 PF07731 Multicopper oxidase CAI14_00120 PF00394 Multicopper oxidase CAI14_00135 PF01432 Peptidase family M3 CAI14_00145 PF02801 Beta-ketoacyl synthase, C-terminal domain CAI14_00145 PF00109 Beta-ketoacyl synthase, N-terminal domain CAI14_00150 PF07977 FabA-like domain CAI14_00155 PF00817 impB/mucB/samB family CAI14_00155 PF11799 impB/mucB/samB family C-terminal domain CAI14_00160 PF13419 Haloacid dehalogenase-like hydrolase CAI14_00165 PF00593 TonB dependent receptor CAI14_00165 PF07715 TonB-dependent Receptor Plug Domain CAI14_00170 PF00756 Putative esterase CAI14_00180 PF13185 GAF domain CAI14_00200 PF01242 6-pyruvoyl tetrahydropterin synthase CAI14_00210 PF07715 TonB-dependent Receptor Plug Domain CAI14_00210 PF00593 TonB dependent receptor CAI14_00220 PF00270 DEAD/DEAH box helicase CAI14_00220 PF00271 Helicase conserved C-terminal domain CAI14_00235 PF02798 Glutathione S-transferase, N-terminal domain CAI14_00235 PF14497 Glutathione S-transferase, C-terminal domain CAI14_00240 PF00437 Type II/IV secretion system protein CAI14_00260 PF00291 Pyridoxal-phosphate dependent enzyme CAI14_00260 PF00571 CBS domain CAI14_00265 PF01053 Cys/Met metabolism PLP-dependent enzyme CAI14_00275 PF00005 ABC transporter CAI14_00275 PF14524 Wzt C-terminal domain CAI14_00285 PF00535 Glycosyl transferase family 2 CAI14_00320 PF01370 NAD dependent epimerase/dehydratase family CAI14_00330 PF00106 short chain dehydrogenase CAI14_00335 PF01565 FAD binding domain CAI14_00335 PF04030 D-arabinono-1,4-lactone oxidase CAI14_00340 PF01040 UbiA prenyltransferase family CAI14_00350 PF00766 Electron transfer flavoprotein FAD-binding domain CAI14_00350 PF01012 Electron transfer flavoprotein domain CAI14_00355 PF01012 Electron transfer flavoprotein domain CAI14_00360 PF16363 GDP-mannose 4,6 dehydratase CAI14_00365 PF00483 Nucleotidyl transferase CAI14_00370 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CAI14_00375 PF04321 RmlD substrate binding domain CAI14_00380 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CAI14_00380 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CAI14_00380 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CAI14_00385 PF01050 Mannose-6-phosphate isomerase CAI14_00385 PF00483 Nucleotidyl transferase CAI14_00390 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CAI14_00390 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CAI14_00390 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CAI14_00390 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CAI14_00395 PF01144 Coenzyme A transferase CAI14_00400 PF01144 Coenzyme A transferase CAI14_00405 PF05045 Rhamnan synthesis protein F CAI14_00405 PF14307 Glycosyltransferase WbsX CAI14_00425 PF03886 ABC-type transport auxiliary lipoprotein component CAI14_00425 PF02470 MlaD protein CAI14_00430 PF00005 ABC transporter CAI14_00435 PF02405 Permease MlaE CAI14_00445 PF00816 H-NS histone family CAI14_00450 PF04073 Aminoacyl-tRNA editing domain CAI14_00450 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CAI14_00450 PF03129 Anticodon binding domain CAI14_00460 PF01066 CDP-alcohol phosphatidyltransferase CAI14_00475 PF00544 Pectate lyase CAI14_00480 PF01464 Transglycosylase SLT domain CAI14_00485 PF07715 TonB-dependent Receptor Plug Domain CAI14_00485 PF00593 TonB dependent receptor CAI14_00500 PF10458 Valyl tRNA synthetase tRNA binding arm CAI14_00500 PF00133 tRNA synthetases class I (I, L, M and V) CAI14_00500 PF08264 Anticodon-binding domain of tRNA CAI14_00515 PF02789 Cytosol aminopeptidase family, N-terminal domain CAI14_00515 PF00883 Cytosol aminopeptidase family, catalytic domain CAI14_00525 PF03739 Lipopolysaccharide export system permease LptF/LptG CAI14_00540 PF02899 Phage integrase, N-terminal SAM-like domain CAI14_00540 PF00589 Phage integrase family CAI14_00550 PF10411 Disulfide bond isomerase protein N-terminus CAI14_00550 PF13098 Thioredoxin-like domain CAI14_00560 PF02769 AIR synthase related protein, C-terminal domain CAI14_00560 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CAI14_00560 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CAI14_00570 PF00082 Subtilase family CAI14_00570 PF04151 Bacterial pre-peptidase C-terminal domain CAI14_00575 PF05658 Head domain of trimeric autotransporter adhesin CAI14_00575 PF03895 YadA-like membrane anchor domain CAI14_00575 PF05662 Coiled stalk of trimeric autotransporter adhesin CAI14_00575 PF13018 Extended Signal Peptide of Type V secretion system CAI14_00580 PF00082 Subtilase family CAI14_00580 PF04151 Bacterial pre-peptidase C-terminal domain CAI14_00585 PF00437 Type II/IV secretion system protein CAI14_00585 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CAI14_00595 PF00482 Type II secretion system (T2SS), protein F CAI14_00600 PF08334 Type II secretion system (T2SS), protein G CAI14_00605 PF12019 Type II transport protein GspH CAI14_00610 PF07963 Prokaryotic N-terminal methylation motif CAI14_00620 PF03934 Type II secretion system (T2SS), protein K CAI14_00625 PF05137 Fimbrial assembly protein (PilN) CAI14_00630 PF10741 Type II secretion system (T2SS), protein M subtype b CAI14_00640 PF00263 Bacterial type II and III secretion system protein CAI14_00640 PF03958 Bacterial type II/III secretion system short domain CAI14_00655 PF00392 Bacterial regulatory proteins, gntR family CAI14_00655 PF07702 UTRA domain CAI14_00665 PF07715 TonB-dependent Receptor Plug Domain CAI14_00665 PF00593 TonB dependent receptor CAI14_00720 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CAI14_00720 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CAI14_00735 PF03552 Cellulose synthase CAI14_00735 PF07238 PilZ domain CAI14_00735 PF00535 Glycosyl transferase family 2 CAI14_00740 PF03170 Bacterial cellulose synthase subunit CAI14_00745 PF01270 Glycosyl hydrolases family 8 CAI14_00750 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) CAI14_00780 PF01327 Polypeptide deformylase CAI14_00785 PF02645 Uncharacterised protein, DegV family COG1307 CAI14_00820 PF01979 Amidohydrolase family CAI14_00825 PF01979 Amidohydrolase family CAI14_00840 PF00462 Glutaredoxin CAI14_00845 PF01522 Polysaccharide deacetylase CAI14_00875 PF00155 Aminotransferase class I and II CAI14_00880 PF00664 ABC transporter transmembrane region CAI14_00880 PF00005 ABC transporter CAI14_00880 PF03412 Peptidase C39 family CAI14_00895 PF01121 Dephospho-CoA kinase CAI14_00900 PF01478 Type IV leader peptidase family CAI14_00900 PF06750 Bacterial Peptidase A24 N-terminal domain CAI14_00905 PF00482 Type II secretion system (T2SS), protein F CAI14_00910 PF00114 Pilin (bacterial filament) CAI14_00910 PF07963 Prokaryotic N-terminal methylation motif CAI14_00915 PF07963 Prokaryotic N-terminal methylation motif CAI14_00915 PF00114 Pilin (bacterial filament) CAI14_00920 PF00437 Type II/IV secretion system protein CAI14_00920 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CAI14_00930 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CAI14_00930 PF00437 Type II/IV secretion system protein CAI14_00940 PF02954 Bacterial regulatory protein, Fis family CAI14_00940 PF00072 Response regulator receiver domain CAI14_00940 PF00158 Sigma-54 interaction domain CAI14_00945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_00945 PF00512 His Kinase A (phospho-acceptor) domain CAI14_00950 PF08442 ATP-grasp domain CAI14_00950 PF00549 CoA-ligase CAI14_00955 PF02629 CoA binding domain CAI14_00955 PF00549 CoA-ligase CAI14_00965 PF00795 Carbon-nitrogen hydrolase CAI14_00965 PF02540 NAD synthase CAI14_00975 PF13525 Outer membrane lipoprotein CAI14_00980 PF00849 RNA pseudouridylate synthase CAI14_00995 PF04134 Protein of unknown function, DUF393 CAI14_01000 PF00672 HAMP domain CAI14_01000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAI14_01000 PF02203 Tar ligand binding domain homologue CAI14_01010 PF01011 PQQ enzyme repeat CAI14_01015 PF00982 Glycosyltransferase family 20 CAI14_01020 PF00723 Glycosyl hydrolases family 15 CAI14_01025 PF02358 Trehalose-phosphatase CAI14_01035 PF00593 TonB dependent receptor CAI14_01035 PF07715 TonB-dependent Receptor Plug Domain CAI14_01070 PF01541 GIY-YIG catalytic domain CAI14_01080 PF00593 TonB dependent receptor CAI14_01080 PF07715 TonB-dependent Receptor Plug Domain CAI14_01085 PF00296 Luciferase-like monooxygenase CAI14_01090 PF00248 Aldo/keto reductase family CAI14_01095 PF09084 NMT1/THI5 like CAI14_01100 PF00528 Binding-protein-dependent transport system inner membrane component CAI14_01105 PF00005 ABC transporter CAI14_01110 PF17871 AAA lid domain CAI14_01110 PF00004 ATPase family associated with various cellular activities (AAA) CAI14_01110 PF10431 C-terminal, D2-small domain, of ClpB protein CAI14_01110 PF02861 Clp amino terminal domain, pathogenicity island component CAI14_01110 PF07724 AAA domain (Cdc48 subfamily) CAI14_01115 PF07715 TonB-dependent Receptor Plug Domain CAI14_01115 PF00593 TonB dependent receptor CAI14_01130 PF12557 Cob(I)alamin adenosyltransferase N terminal CAI14_01130 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CAI14_01140 PF00155 Aminotransferase class I and II CAI14_01145 PF07685 CobB/CobQ-like glutamine amidotransferase domain CAI14_01145 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CAI14_01150 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CAI14_01155 PF02277 Phosphoribosyltransferase CAI14_01185 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CAI14_01185 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CAI14_01195 PF07690 Major Facilitator Superfamily CAI14_01200 PF04183 IucA / IucC family CAI14_01200 PF06276 Ferric iron reductase FhuF-like transporter CAI14_01210 PF07660 Secretin and TonB N terminus short domain CAI14_01210 PF00593 TonB dependent receptor CAI14_01210 PF07715 TonB-dependent Receptor Plug Domain CAI14_01235 PF02254 TrkA-N domain CAI14_01235 PF00999 Sodium/hydrogen exchanger family CAI14_01245 PF00067 Cytochrome P450 CAI14_01250 PF07715 TonB-dependent Receptor Plug Domain CAI14_01250 PF00593 TonB dependent receptor CAI14_01270 PF00593 TonB dependent receptor CAI14_01270 PF07715 TonB-dependent Receptor Plug Domain CAI14_01275 PF00005 ABC transporter CAI14_01275 PF12848 ABC transporter CAI14_01285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAI14_01285 PF03466 LysR substrate binding domain CAI14_01305 PF05506 Domain of unknown function (DUF756) CAI14_01305 PF04185 Phosphoesterase family CAI14_01315 PF07690 Major Facilitator Superfamily CAI14_01330 PF01336 OB-fold nucleic acid binding domain CAI14_01330 PF00152 tRNA synthetases class II (D, K and N) CAI14_01330 PF02938 GAD domain CAI14_01345 PF01709 Transcriptional regulator CAI14_01350 PF02075 Crossover junction endodeoxyribonuclease RuvC CAI14_01355 PF07499 RuvA, C-terminal domain CAI14_01355 PF01330 RuvA N terminal domain CAI14_01360 PF02705 K+ potassium transporter CAI14_01370 PF05491 RuvB C-terminal winged helix domain CAI14_01370 PF05496 Holliday junction DNA helicase RuvB P-loop domain CAI14_01370 PF17864 RuvB AAA lid domain CAI14_01375 PF03061 Thioesterase superfamily CAI14_01380 PF01618 MotA/TolQ/ExbB proton channel family CAI14_01385 PF02472 Biopolymer transport protein ExbD/TolR CAI14_01395 PF04052 TolB amino-terminal domain CAI14_01395 PF07676 WD40-like Beta Propeller Repeat CAI14_01400 PF00691 OmpA family CAI14_01410 PF04055 Radical SAM superfamily CAI14_01420 PF06508 Queuosine biosynthesis protein QueC CAI14_01425 PF13426 PAS domain CAI14_01425 PF07536 HWE histidine kinase CAI14_01425 PF13581 Histidine kinase-like ATPase domain CAI14_01445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAI14_01445 PF02203 Tar ligand binding domain homologue CAI14_01445 PF00672 HAMP domain CAI14_01480 PF00270 DEAD/DEAH box helicase CAI14_01480 PF00271 Helicase conserved C-terminal domain CAI14_01480 PF00570 HRDC domain CAI14_01480 PF09382 RQC domain CAI14_01480 PF16124 RecQ zinc-binding CAI14_01490 PF00210 Ferritin-like domain CAI14_01495 PF00270 DEAD/DEAH box helicase CAI14_01495 PF04408 Helicase associated domain (HA2) CAI14_01495 PF00271 Helicase conserved C-terminal domain CAI14_01495 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CAI14_01495 PF11898 Domain of unknown function (DUF3418) CAI14_01525 PF13186 Iron-sulfur cluster-binding domain CAI14_01525 PF04055 Radical SAM superfamily CAI14_01530 PF05402 Coenzyme PQQ synthesis protein D (PqqD) CAI14_01535 PF03070 TENA/THI-4/PQQC family CAI14_01540 PF12706 Beta-lactamase superfamily domain CAI14_01545 PF08042 PqqA family CAI14_01550 PF02824 TGS domain CAI14_01550 PF13291 ACT domain CAI14_01550 PF04607 Region found in RelA / SpoT proteins CAI14_01570 PF00535 Glycosyl transferase family 2 CAI14_01575 PF00912 Transglycosylase CAI14_01575 PF00905 Penicillin binding protein transpeptidase domain CAI14_01575 PF14814 Bifunctional transglycosylase second domain CAI14_01585 PF04851 Type III restriction enzyme, res subunit CAI14_01585 PF13307 Helicase C-terminal domain CAI14_01590 PF00814 Glycoprotease family CAI14_01595 PF03747 ADP-ribosylglycohydrolase CAI14_01605 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CAI14_01605 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CAI14_01610 PF00072 Response regulator receiver domain CAI14_01615 PF00072 Response regulator receiver domain CAI14_01620 PF01584 CheW-like domain CAI14_01625 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CAI14_01625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAI14_01630 PF01627 Hpt domain CAI14_01630 PF02895 Signal transducing histidine kinase, homodimeric domain CAI14_01630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_01630 PF01584 CheW-like domain CAI14_01630 PF00072 Response regulator receiver domain CAI14_01645 PF13302 Acetyltransferase (GNAT) domain CAI14_01660 PF01112 Asparaginase CAI14_01665 PF03932 CutC family CAI14_01700 PF01301 Glycosyl hydrolases family 35 CAI14_01705 PF17678 Glycosyl hydrolase family 92 N-terminal domain CAI14_01705 PF07971 Glycosyl hydrolase family 92 CAI14_01735 PF03412 Peptidase C39 family CAI14_01735 PF00005 ABC transporter CAI14_01735 PF00664 ABC transporter transmembrane region CAI14_01740 PF07691 PA14 domain CAI14_01740 PF01915 Glycosyl hydrolase family 3 C-terminal domain CAI14_01740 PF00933 Glycosyl hydrolase family 3 N terminal domain CAI14_01740 PF14310 Fibronectin type III-like domain CAI14_01755 PF01476 LysM domain CAI14_01755 PF00704 Glycosyl hydrolases family 18 CAI14_01770 PF02685 Glucokinase CAI14_01775 PF04452 RNA methyltransferase CAI14_01780 PF00202 Aminotransferase class-III CAI14_01785 PF00293 NUDIX domain CAI14_01790 PF00459 Inositol monophosphatase family CAI14_01795 PF03819 MazG nucleotide pyrophosphohydrolase domain CAI14_01800 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CAI14_01825 PF01571 Aminomethyltransferase folate-binding domain CAI14_01825 PF08669 Glycine cleavage T-protein C-terminal barrel domain CAI14_01830 PF01597 Glycine cleavage H-protein CAI14_01855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CAI14_01855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CAI14_01855 PF09317 Domain of unknown function (DUF1974) CAI14_01860 PF00561 alpha/beta hydrolase fold CAI14_01865 PF00440 Bacterial regulatory proteins, tetR family CAI14_01880 PF00593 TonB dependent receptor CAI14_01880 PF07715 TonB-dependent Receptor Plug Domain CAI14_01890 PF01430 Hsp33 protein CAI14_01895 PF00912 Transglycosylase CAI14_01900 PF00535 Glycosyl transferase family 2 CAI14_01905 PF00478 IMP dehydrogenase / GMP reductase domain CAI14_01905 PF00571 CBS domain CAI14_01910 PF05170 AsmA family CAI14_01915 PF03006 Haemolysin-III related CAI14_01920 PF00009 Elongation factor Tu GTP binding domain CAI14_01920 PF16658 Class II release factor RF3, C-terminal domain CAI14_01925 PF08525 Opacity-associated protein A N-terminal motif CAI14_01925 PF01476 LysM domain CAI14_01925 PF01551 Peptidase family M23 CAI14_01930 PF00561 alpha/beta hydrolase fold CAI14_01935 PF01053 Cys/Met metabolism PLP-dependent enzyme CAI14_01940 PF00696 Amino acid kinase family CAI14_01940 PF00742 Homoserine dehydrogenase CAI14_01940 PF03447 Homoserine dehydrogenase, NAD binding domain CAI14_01950 PF12697 Alpha/beta hydrolase family CAI14_01955 PF03315 Serine dehydratase beta chain CAI14_01955 PF03313 Serine dehydratase alpha chain CAI14_01975 PF04264 YceI-like domain CAI14_01980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_01980 PF00512 His Kinase A (phospho-acceptor) domain CAI14_01980 PF00072 Response regulator receiver domain CAI14_01980 PF01627 Hpt domain CAI14_01990 PF00512 His Kinase A (phospho-acceptor) domain CAI14_01990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_01990 PF01627 Hpt domain CAI14_01990 PF00072 Response regulator receiver domain CAI14_01990 PF17149 Periplasmic sensor domain found in signal transduction proteins CAI14_01990 PF00672 HAMP domain CAI14_01995 PF01627 Hpt domain CAI14_01995 PF00072 Response regulator receiver domain CAI14_01995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_01995 PF00672 HAMP domain CAI14_01995 PF17149 Periplasmic sensor domain found in signal transduction proteins CAI14_01995 PF00512 His Kinase A (phospho-acceptor) domain CAI14_02000 PF07690 Major Facilitator Superfamily CAI14_02005 PF01208 Uroporphyrinogen decarboxylase (URO-D) CAI14_02015 PF01761 3-dehydroquinate synthase CAI14_02020 PF01202 Shikimate kinase CAI14_02025 PF01243 Pyridoxamine 5'-phosphate oxidase CAI14_02025 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CAI14_02035 PF04012 PspA/IM30 family CAI14_02060 PF03738 Glutathionylspermidine synthase preATP-grasp CAI14_02070 PF07690 Major Facilitator Superfamily CAI14_02075 PF00376 MerR family regulatory protein CAI14_02075 PF09278 MerR, DNA binding CAI14_02135 PF12706 Beta-lactamase superfamily domain CAI14_02165 PF00324 Amino acid permease CAI14_02170 PF00196 Bacterial regulatory proteins, luxR family CAI14_02180 PF00561 alpha/beta hydrolase fold CAI14_02190 PF00544 Pectate lyase CAI14_02200 PF00324 Amino acid permease CAI14_02220 PF01654 Cytochrome bd terminal oxidase subunit I CAI14_02225 PF02322 Cytochrome bd terminal oxidase subunit II CAI14_02235 PF00756 Putative esterase CAI14_02240 PF01769 Divalent cation transporter CAI14_02240 PF03448 MgtE intracellular N domain CAI14_02240 PF00571 CBS domain CAI14_02250 PF05524 PEP-utilising enzyme, N-terminal CAI14_02250 PF02896 PEP-utilising enzyme, TIM barrel domain CAI14_02250 PF00391 PEP-utilising enzyme, mobile domain CAI14_02255 PF00381 PTS HPr component phosphorylation site CAI14_02265 PF03668 P-loop ATPase protein family CAI14_02270 PF02603 HPr Serine kinase N terminus CAI14_02270 PF07475 HPr Serine kinase C-terminal domain CAI14_02275 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CAI14_02280 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CAI14_02285 PF00309 Sigma-54 factor, Activator interacting domain (AID) CAI14_02285 PF04552 Sigma-54, DNA binding domain CAI14_02285 PF04963 Sigma-54 factor, core binding domain CAI14_02290 PF00005 ABC transporter CAI14_02295 PF03968 OstA-like protein CAI14_02310 PF01380 SIS domain CAI14_02310 PF00571 CBS domain CAI14_02315 PF01722 BolA-like protein CAI14_02320 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CAI14_02340 PF00551 Formyl transferase CAI14_02350 PF00586 AIR synthase related protein, N-terminal domain CAI14_02350 PF02769 AIR synthase related protein, C-terminal domain CAI14_02360 PF01594 AI-2E family transporter CAI14_02365 PF00308 Bacterial dnaA protein CAI14_02370 PF00483 Nucleotidyl transferase CAI14_02375 PF01636 Phosphotransferase enzyme family CAI14_02405 PF00667 FAD binding domain CAI14_02405 PF00175 Oxidoreductase NAD-binding domain CAI14_02405 PF00258 Flavodoxin CAI14_02410 PF02424 ApbE family CAI14_02435 PF13640 2OG-Fe(II) oxygenase superfamily CAI14_02435 PF18331 PKHD-type hydroxylase C-terminal domain CAI14_02440 PF00593 TonB dependent receptor CAI14_02440 PF07715 TonB-dependent Receptor Plug Domain CAI14_02445 PF00355 Rieske [2Fe-2S] domain CAI14_02455 PF00266 Aminotransferase class-V CAI14_02460 PF01458 Uncharacterized protein family (UPF0051) CAI14_02465 PF00005 ABC transporter CAI14_02470 PF01458 Uncharacterized protein family (UPF0051) CAI14_02475 PF02082 Transcriptional regulator CAI14_02485 PF01965 DJ-1/PfpI family CAI14_02505 PF01551 Peptidase family M23 CAI14_02515 PF14748 Pyrroline-5-carboxylate reductase dimerisation CAI14_02515 PF03807 NADP oxidoreductase coenzyme F420-dependent CAI14_02520 PF01168 Alanine racemase, N-terminal domain CAI14_02525 PF00437 Type II/IV secretion system protein CAI14_02530 PF00437 Type II/IV secretion system protein CAI14_02535 PF03211 Pectate lyase CAI14_02545 PF00958 GMP synthase C terminal domain CAI14_02545 PF00117 Glutamine amidotransferase class-I CAI14_02545 PF03352 Methyladenine glycosylase CAI14_02545 PF13302 Acetyltransferase (GNAT) domain CAI14_02545 PF13673 Acetyltransferase (GNAT) domain CAI14_02555 PF02622 Uncharacterized ACR, COG1678 CAI14_02560 PF03652 Holliday junction resolvase CAI14_02565 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CAI14_02565 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CAI14_02570 PF02566 OsmC-like protein CAI14_02585 PF02567 Phenazine biosynthesis-like protein CAI14_02590 PF01842 ACT domain CAI14_02590 PF00696 Amino acid kinase family CAI14_02605 PF08245 Mur ligase middle domain CAI14_02605 PF02875 Mur ligase family, glutamate ligase domain CAI14_02620 PF00348 Polyprenyl synthetase CAI14_02625 PF00436 Single-strand binding protein family CAI14_02630 PF00563 EAL domain CAI14_02630 PF01590 GAF domain CAI14_02630 PF00990 Diguanylate cyclase, GGDEF domain CAI14_02630 PF00360 Phytochrome region CAI14_02635 PF00698 Acyl transferase domain CAI14_02635 PF16197 Ketoacyl-synthetase C-terminal extension CAI14_02635 PF00109 Beta-ketoacyl synthase, N-terminal domain CAI14_02635 PF02801 Beta-ketoacyl synthase, C-terminal domain CAI14_02635 PF08659 KR domain CAI14_02635 PF00550 Phosphopantetheine attachment site CAI14_02635 PF14765 Polyketide synthase dehydratase CAI14_02635 PF00107 Zinc-binding dehydrogenase CAI14_02635 PF08240 Alcohol dehydrogenase GroES-like domain CAI14_02640 PF00111 2Fe-2S iron-sulfur cluster binding domain CAI14_02640 PF01799 [2Fe-2S] binding domain CAI14_02640 PF10518 TAT (twin-arginine translocation) pathway signal sequence CAI14_02645 PF03450 CO dehydrogenase flavoprotein C-terminal domain CAI14_02645 PF00941 FAD binding domain in molybdopterin dehydrogenase CAI14_02650 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CAI14_02650 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CAI14_02655 PF13478 XdhC Rossmann domain CAI14_02655 PF02625 XdhC and CoxI family CAI14_02705 PF04328 Selenoprotein, putative CAI14_02710 PF02554 Carbon starvation protein CstA CAI14_02710 PF13722 5TM C-terminal transporter carbon starvation CstA CAI14_02715 PF02678 Pirin CAI14_02715 PF05726 Pirin C-terminal cupin domain CAI14_02740 PF04493 Endonuclease V CAI14_02745 PF00300 Histidine phosphatase superfamily (branch 1) CAI14_02780 PF01790 Prolipoprotein diacylglyceryl transferase CAI14_02785 PF00303 Thymidylate synthase CAI14_02795 PF00186 Dihydrofolate reductase CAI14_02800 PF00158 Sigma-54 interaction domain CAI14_02805 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CAI14_02805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CAI14_02810 PF00005 ABC transporter CAI14_02815 PF00528 Binding-protein-dependent transport system inner membrane component CAI14_02825 PF00296 Luciferase-like monooxygenase CAI14_02830 PF03358 NADPH-dependent FMN reductase CAI14_02850 PF00296 Luciferase-like monooxygenase CAI14_02855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CAI14_02860 PF00528 Binding-protein-dependent transport system inner membrane component CAI14_02870 PF00005 ABC transporter CAI14_02870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CAI14_02875 PF00149 Calcineurin-like phosphoesterase CAI14_02880 PF04379 ApaG domain CAI14_02885 PF00398 Ribosomal RNA adenine dimethylase CAI14_02890 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CAI14_02895 PF00639 PPIC-type PPIASE domain CAI14_02895 PF09312 SurA N-terminal domain CAI14_02900 PF04453 LPS transport system D CAI14_02900 PF03968 OstA-like protein CAI14_02905 PF00850 Histone deacetylase domain CAI14_02910 PF01923 Cobalamin adenosyltransferase CAI14_02925 PF01494 FAD binding domain CAI14_02930 PF01494 FAD binding domain CAI14_02950 PF07729 FCD domain CAI14_02950 PF00392 Bacterial regulatory proteins, gntR family CAI14_02955 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CAI14_02960 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit CAI14_02960 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CAI14_02965 PF03466 LysR substrate binding domain CAI14_02965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAI14_02970 PF00501 AMP-binding enzyme CAI14_02970 PF13193 AMP-binding enzyme C-terminal domain CAI14_02975 PF00171 Aldehyde dehydrogenase family CAI14_02980 PF00378 Enoyl-CoA hydratase/isomerase CAI14_03000 PF08450 SMP-30/Gluconolactonase/LRE-like region CAI14_03005 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CAI14_03005 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CAI14_03015 PF18125 RlmM ferredoxin-like domain CAI14_03015 PF01728 FtsJ-like methyltransferase CAI14_03035 PF00892 EamA-like transporter family CAI14_03045 PF00749 tRNA synthetases class I (E and Q), catalytic domain CAI14_03045 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CAI14_03060 PF00072 Response regulator receiver domain CAI14_03060 PF00990 Diguanylate cyclase, GGDEF domain CAI14_03065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_03065 PF00672 HAMP domain CAI14_03065 PF00072 Response regulator receiver domain CAI14_03065 PF00512 His Kinase A (phospho-acceptor) domain CAI14_03065 PF01627 Hpt domain CAI14_03065 PF17149 Periplasmic sensor domain found in signal transduction proteins CAI14_03080 PF01625 Peptide methionine sulfoxide reductase CAI14_03090 PF00923 Transaldolase/Fructose-6-phosphate aldolase CAI14_03095 PF01272 Transcription elongation factor, GreA/GreB, C-term CAI14_03095 PF14760 Rnk N-terminus CAI14_03105 PF03466 LysR substrate binding domain CAI14_03105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAI14_03110 PF13192 Thioredoxin domain CAI14_03110 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAI14_03115 PF00578 AhpC/TSA family CAI14_03115 PF10417 C-terminal domain of 1-Cys peroxiredoxin CAI14_03120 PF05175 Methyltransferase small domain CAI14_03120 PF17827 PrmC N-terminal domain CAI14_03125 PF00561 alpha/beta hydrolase fold CAI14_03135 PF00293 NUDIX domain CAI14_03140 PF01612 3'-5' exonuclease CAI14_03140 PF00476 DNA polymerase family A CAI14_03140 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CAI14_03140 PF01367 5'-3' exonuclease, C-terminal SAM fold CAI14_03170 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CAI14_03170 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CAI14_03170 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CAI14_03190 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CAI14_03195 PF02233 NAD(P) transhydrogenase beta subunit CAI14_03210 PF01063 Amino-transferase class IV CAI14_03220 PF04151 Bacterial pre-peptidase C-terminal domain CAI14_03220 PF00082 Subtilase family CAI14_03230 PF00082 Subtilase family CAI14_03230 PF04151 Bacterial pre-peptidase C-terminal domain CAI14_03235 PF04073 Aminoacyl-tRNA editing domain CAI14_03245 PF17189 Glycosyl hydrolase family 30 beta sandwich domain CAI14_03245 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain CAI14_03255 PF03358 NADPH-dependent FMN reductase CAI14_03260 PF03631 Virulence factor BrkB CAI14_03270 PF00708 Acylphosphatase CAI14_03280 PF03976 Polyphosphate kinase 2 (PPK2) CAI14_03300 PF00472 RF-1 domain CAI14_03300 PF03462 PCRF domain CAI14_03305 PF01488 Shikimate / quinate 5-dehydrogenase CAI14_03305 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CAI14_03305 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CAI14_03315 PF03550 Outer membrane lipoprotein LolB CAI14_03320 PF00288 GHMP kinases N terminal domain CAI14_03320 PF08544 GHMP kinases C terminal CAI14_03330 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CAI14_03330 PF14572 Phosphoribosyl synthetase-associated domain CAI14_03335 PF01386 Ribosomal L25p family CAI14_03335 PF14693 Ribosomal protein TL5, C-terminal domain CAI14_03340 PF01195 Peptidyl-tRNA hydrolase CAI14_03345 PF01926 50S ribosome-binding GTPase CAI14_03345 PF06071 Protein of unknown function (DUF933) CAI14_03365 PF00009 Elongation factor Tu GTP binding domain CAI14_03365 PF03144 Elongation factor Tu domain 2 CAI14_03365 PF03143 Elongation factor Tu C-terminal domain CAI14_03375 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CAI14_03380 PF02357 Transcription termination factor nusG CAI14_03380 PF00467 KOW motif CAI14_03385 PF03946 Ribosomal protein L11, N-terminal domain CAI14_03385 PF00298 Ribosomal protein L11, RNA binding domain CAI14_03390 PF00687 Ribosomal protein L1p/L10e family CAI14_03395 PF00466 Ribosomal protein L10 CAI14_03400 PF16320 Ribosomal protein L7/L12 dimerisation domain CAI14_03400 PF00542 Ribosomal protein L7/L12 C-terminal domain CAI14_03405 PF04563 RNA polymerase beta subunit CAI14_03405 PF04561 RNA polymerase Rpb2, domain 2 CAI14_03405 PF04565 RNA polymerase Rpb2, domain 3 CAI14_03405 PF10385 RNA polymerase beta subunit external 1 domain CAI14_03405 PF04560 RNA polymerase Rpb2, domain 7 CAI14_03405 PF00562 RNA polymerase Rpb2, domain 6 CAI14_03410 PF04998 RNA polymerase Rpb1, domain 5 CAI14_03410 PF04997 RNA polymerase Rpb1, domain 1 CAI14_03410 PF00623 RNA polymerase Rpb1, domain 2 CAI14_03410 PF04983 RNA polymerase Rpb1, domain 3 CAI14_03410 PF05000 RNA polymerase Rpb1, domain 4 CAI14_03415 PF00164 Ribosomal protein S12/S23 CAI14_03420 PF00177 Ribosomal protein S7p/S5e CAI14_03425 PF14492 Elongation Factor G, domain II CAI14_03425 PF03144 Elongation factor Tu domain 2 CAI14_03425 PF00009 Elongation factor Tu GTP binding domain CAI14_03425 PF03764 Elongation factor G, domain IV CAI14_03425 PF00679 Elongation factor G C-terminus CAI14_03430 PF03143 Elongation factor Tu C-terminal domain CAI14_03430 PF03144 Elongation factor Tu domain 2 CAI14_03430 PF00009 Elongation factor Tu GTP binding domain CAI14_03435 PF00338 Ribosomal protein S10p/S20e CAI14_03440 PF00297 Ribosomal protein L3 CAI14_03445 PF00573 Ribosomal protein L4/L1 family CAI14_03450 PF00276 Ribosomal protein L23 CAI14_03455 PF00181 Ribosomal Proteins L2, RNA binding domain CAI14_03455 PF03947 Ribosomal Proteins L2, C-terminal domain CAI14_03460 PF00203 Ribosomal protein S19 CAI14_03465 PF00237 Ribosomal protein L22p/L17e CAI14_03470 PF00189 Ribosomal protein S3, C-terminal domain CAI14_03470 PF07650 KH domain CAI14_03475 PF00252 Ribosomal protein L16p/L10e CAI14_03480 PF00831 Ribosomal L29 protein CAI14_03485 PF00366 Ribosomal protein S17 CAI14_03490 PF00238 Ribosomal protein L14p/L23e CAI14_03495 PF00467 KOW motif CAI14_03495 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CAI14_03500 PF00673 ribosomal L5P family C-terminus CAI14_03500 PF00281 Ribosomal protein L5 CAI14_03505 PF00253 Ribosomal protein S14p/S29e CAI14_03510 PF00410 Ribosomal protein S8 CAI14_03515 PF00347 Ribosomal protein L6 CAI14_03520 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CAI14_03525 PF03719 Ribosomal protein S5, C-terminal domain CAI14_03525 PF00333 Ribosomal protein S5, N-terminal domain CAI14_03530 PF00327 Ribosomal protein L30p/L7e CAI14_03535 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CAI14_03540 PF00344 SecY translocase CAI14_03545 PF00416 Ribosomal protein S13/S18 CAI14_03550 PF00411 Ribosomal protein S11 CAI14_03555 PF00163 Ribosomal protein S4/S9 N-terminal domain CAI14_03555 PF01479 S4 domain CAI14_03560 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CAI14_03560 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CAI14_03560 PF01000 RNA polymerase Rpb3/RpoA insert domain CAI14_03565 PF01196 Ribosomal protein L17 CAI14_03570 PF02600 Disulfide bond formation protein DsbB CAI14_03590 PF01474 Class-II DAHP synthetase family CAI14_03600 PF01425 Amidase CAI14_03615 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CAI14_03620 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CAI14_03620 PF00056 lactate/malate dehydrogenase, NAD binding domain CAI14_03630 PF00043 Glutathione S-transferase, C-terminal domain CAI14_03630 PF02798 Glutathione S-transferase, N-terminal domain CAI14_03650 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAI14_03650 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CAI14_03665 PF00691 OmpA family CAI14_03665 PF05736 OprF membrane domain CAI14_03675 PF00849 RNA pseudouridylate synthase CAI14_03685 PF00155 Aminotransferase class I and II CAI14_03695 PF00528 Binding-protein-dependent transport system inner membrane component CAI14_03700 PF00528 Binding-protein-dependent transport system inner membrane component CAI14_03705 PF12857 TOBE-like domain CAI14_03705 PF17850 CysA C-terminal regulatory domain CAI14_03705 PF00005 ABC transporter CAI14_03715 PF08240 Alcohol dehydrogenase GroES-like domain CAI14_03715 PF00107 Zinc-binding dehydrogenase CAI14_03745 PF10459 Peptidase S46 CAI14_03750 PF00300 Histidine phosphatase superfamily (branch 1) CAI14_03760 PF08245 Mur ligase middle domain CAI14_03760 PF02875 Mur ligase family, glutamate ligase domain CAI14_03775 PF00156 Phosphoribosyl transferase domain CAI14_03780 PF04305 Protein of unknown function (DUF455) CAI14_03800 PF00149 Calcineurin-like phosphoesterase CAI14_03805 PF01569 PAP2 superfamily CAI14_03810 PF00534 Glycosyl transferases group 1 CAI14_03810 PF13439 Glycosyltransferase Family 4 CAI14_03815 PF02541 Ppx/GppA phosphatase family CAI14_03820 PF17941 Polyphosphate kinase C-terminal domain 1 CAI14_03820 PF02503 Polyphosphate kinase middle domain CAI14_03820 PF13090 Polyphosphate kinase C-terminal domain 2 CAI14_03820 PF13089 Polyphosphate kinase N-terminal domain CAI14_03825 PF11808 Phosphate regulon sensor protein PhoR CAI14_03825 PF00989 PAS fold CAI14_03825 PF00512 His Kinase A (phospho-acceptor) domain CAI14_03825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_03830 PF00486 Transcriptional regulatory protein, C terminal CAI14_03830 PF00072 Response regulator receiver domain CAI14_03835 PF01435 Peptidase family M48 CAI14_03835 PF13181 Tetratricopeptide repeat CAI14_03840 PF00462 Glutaredoxin CAI14_03850 PF00180 Isocitrate/isopropylmalate dehydrogenase CAI14_03880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_03880 PF00512 His Kinase A (phospho-acceptor) domain CAI14_03880 PF00989 PAS fold CAI14_03890 PF05698 Bacterial trigger factor protein (TF) C-terminus CAI14_03890 PF05697 Bacterial trigger factor protein (TF) CAI14_03895 PF00574 Clp protease CAI14_03900 PF10431 C-terminal, D2-small domain, of ClpB protein CAI14_03900 PF06689 ClpX C4-type zinc finger CAI14_03900 PF07724 AAA domain (Cdc48 subfamily) CAI14_03905 PF02190 ATP-dependent protease La (LON) substrate-binding domain CAI14_03905 PF00004 ATPase family associated with various cellular activities (AAA) CAI14_03905 PF05362 Lon protease (S16) C-terminal proteolytic domain CAI14_03910 PF00216 Bacterial DNA-binding protein CAI14_03930 PF05257 CHAP domain CAI14_03930 PF01476 LysM domain CAI14_03935 PF16123 Hydroxyacylglutathione hydrolase C-terminus CAI14_03935 PF00753 Metallo-beta-lactamase superfamily CAI14_03945 PF00075 RNase H CAI14_03950 PF00929 Exonuclease CAI14_03970 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CAI14_03980 PF12706 Beta-lactamase superfamily domain CAI14_03980 PF00753 Metallo-beta-lactamase superfamily CAI14_03985 PF06463 Molybdenum Cofactor Synthesis C CAI14_03985 PF04055 Radical SAM superfamily CAI14_03990 PF01967 MoaC family CAI14_03995 PF02597 ThiS family CAI14_04000 PF02391 MoaE protein CAI14_04015 PF12169 DNA polymerase III subunits gamma and tau domain III CAI14_04015 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CAI14_04015 PF12170 DNA polymerase III tau subunit V interacting with alpha CAI14_04020 PF02575 YbaB/EbfC DNA-binding family CAI14_04025 PF13662 Toprim domain CAI14_04025 PF02132 RecR protein CAI14_04030 PF01230 HIT domain CAI14_04040 PF01841 Transglutaminase-like superfamily CAI14_04040 PF13559 Domain of unknown function (DUF4129) CAI14_04040 PF11992 Domain of unknown function (DUF3488) CAI14_04050 PF07726 ATPase family associated with various cellular activities (AAA) CAI14_04050 PF17863 AAA lid domain CAI14_04080 PF02545 Maf-like protein CAI14_04085 PF02620 Large ribosomal RNA subunit accumulation protein YceD CAI14_04090 PF01783 Ribosomal L32p protein family CAI14_04095 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CAI14_04095 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CAI14_04105 PF00698 Acyl transferase domain CAI14_04115 PF00550 Phosphopantetheine attachment site CAI14_04120 PF00109 Beta-ketoacyl synthase, N-terminal domain CAI14_04120 PF02801 Beta-ketoacyl synthase, C-terminal domain CAI14_04125 PF00425 chorismate binding enzyme CAI14_04125 PF04715 Anthranilate synthase component I, N terminal region CAI14_04130 PF02618 YceG-like family CAI14_04135 PF09115 DNA polymerase III, delta subunit, C terminal CAI14_04155 PF02954 Bacterial regulatory protein, Fis family CAI14_04155 PF06506 Propionate catabolism activator CAI14_04155 PF00158 Sigma-54 interaction domain CAI14_04165 PF00285 Citrate synthase, C-terminal domain CAI14_04170 PF00694 Aconitase C-terminal domain CAI14_04170 PF00330 Aconitase family (aconitate hydratase) CAI14_04175 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH CAI14_04190 PF04303 PrpF protein CAI14_04195 PF00593 TonB dependent receptor CAI14_04195 PF07715 TonB-dependent Receptor Plug Domain CAI14_04210 PF00207 Alpha-2-macroglobulin family CAI14_04210 PF07703 Alpha-2-macroglobulin bait region domain CAI14_04210 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain CAI14_04210 PF11974 Bacterial alpha-2-macroglobulin MG3 domain CAI14_04210 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain CAI14_04210 PF17962 Bacterial macroglobulin domain 6 CAI14_04210 PF01835 MG2 domain CAI14_04210 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain CAI14_04230 PF06832 Penicillin-Binding Protein C-terminus Family CAI14_04230 PF00912 Transglycosylase CAI14_04230 PF00905 Penicillin binding protein transpeptidase domain CAI14_04240 PF08534 Redoxin CAI14_04250 PF00226 DnaJ domain CAI14_04250 PF01556 DnaJ C terminal domain CAI14_04255 PF00072 Response regulator receiver domain CAI14_04260 PF01145 SPFH domain / Band 7 family CAI14_04260 PF12221 Bacterial membrane protein N terminal CAI14_04265 PF01145 SPFH domain / Band 7 family CAI14_04275 PF00709 Adenylosuccinate synthetase CAI14_04280 PF01433 Peptidase family M1 domain CAI14_04280 PF11838 ERAP1-like C-terminal domain CAI14_04290 PF00440 Bacterial regulatory proteins, tetR family CAI14_04320 PF01420 Type I restriction modification DNA specificity domain CAI14_04335 PF02384 N-6 DNA Methylase CAI14_04345 PF08463 EcoEI R protein C-terminal CAI14_04345 PF00271 Helicase conserved C-terminal domain CAI14_04345 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CAI14_04345 PF04851 Type III restriction enzyme, res subunit CAI14_04380 PF13456 Reverse transcriptase-like CAI14_04380 PF00300 Histidine phosphatase superfamily (branch 1) CAI14_04385 PF01256 Carbohydrate kinase CAI14_04395 PF00723 Glycosyl hydrolases family 15 CAI14_04410 PF17678 Glycosyl hydrolase family 92 N-terminal domain CAI14_04410 PF07971 Glycosyl hydrolase family 92 CAI14_04415 PF00106 short chain dehydrogenase CAI14_04425 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAI14_04445 PF17755 UvrA DNA-binding domain CAI14_04485 PF02311 AraC-like ligand binding domain CAI14_04485 PF12833 Helix-turn-helix domain CAI14_04510 PF00199 Catalase CAI14_04510 PF06628 Catalase-related immune-responsive CAI14_04510 PF18011 C-terminal domain found in long catalases CAI14_04515 PF00248 Aldo/keto reductase family CAI14_04520 PF00135 Carboxylesterase family CAI14_04525 PF02347 Glycine cleavage system P-protein CAI14_04530 PF07690 Major Facilitator Superfamily CAI14_04545 PF08019 Phosphoethanolamine transferase EptA/EptB CAI14_04545 PF00884 Sulfatase CAI14_04560 PF00072 Response regulator receiver domain CAI14_04560 PF00486 Transcriptional regulatory protein, C terminal CAI14_04565 PF00512 His Kinase A (phospho-acceptor) domain CAI14_04565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_04565 PF08521 Two-component sensor kinase N-terminal CAI14_04575 PF03776 Septum formation topological specificity factor MinE CAI14_04580 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CAI14_04585 PF03775 Septum formation inhibitor MinC, C-terminal domain CAI14_04585 PF05209 Septum formation inhibitor MinC, N-terminal domain CAI14_04600 PF07730 Histidine kinase CAI14_04605 PF00072 Response regulator receiver domain CAI14_04605 PF00196 Bacterial regulatory proteins, luxR family CAI14_04620 PF00730 HhH-GPD superfamily base excision DNA repair protein CAI14_04650 PF02222 ATP-grasp domain CAI14_04660 PF04377 Arginine-tRNA-protein transferase, C terminus CAI14_04660 PF04376 Arginine-tRNA-protein transferase, N terminus CAI14_04700 PF00378 Enoyl-CoA hydratase/isomerase CAI14_04715 PF00005 ABC transporter CAI14_04715 PF17755 UvrA DNA-binding domain CAI14_04715 PF17760 UvrA interaction domain CAI14_04720 PF00829 Ribosomal prokaryotic L21 protein CAI14_04725 PF01016 Ribosomal L27 protein CAI14_04730 PF01018 GTP1/OBG CAI14_04730 PF01926 50S ribosome-binding GTPase CAI14_04735 PF01649 Ribosomal protein S20 CAI14_04740 PF03023 Lipid II flippase MurJ CAI14_04745 PF06574 FAD synthetase CAI14_04745 PF01687 Riboflavin kinase CAI14_04750 PF06827 Zinc finger found in FPG and IleRS CAI14_04750 PF00133 tRNA synthetases class I (I, L, M and V) CAI14_04750 PF08264 Anticodon-binding domain of tRNA CAI14_04755 PF01252 Signal peptidase (SPase) II CAI14_04760 PF02401 LytB protein CAI14_04770 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CAI14_04770 PF06481 COX Aromatic Rich Motif CAI14_04775 PF00115 Cytochrome C and Quinol oxidase polypeptide I CAI14_04780 PF00510 Cytochrome c oxidase subunit III CAI14_04785 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CAI14_04795 PF18073 Rubredoxin metal binding domain CAI14_04800 PF05656 Protein of unknown function (DUF805) CAI14_04810 PF12833 Helix-turn-helix domain CAI14_04815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_04815 PF00183 Hsp90 protein CAI14_04825 PF08678 Rsbr N terminal CAI14_04825 PF01740 STAS domain CAI14_04830 PF01740 STAS domain CAI14_04835 PF13581 Histidine kinase-like ATPase domain CAI14_04845 PF00672 HAMP domain CAI14_04845 PF01627 Hpt domain CAI14_04845 PF17149 Periplasmic sensor domain found in signal transduction proteins CAI14_04845 PF00512 His Kinase A (phospho-acceptor) domain CAI14_04845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_04845 PF00072 Response regulator receiver domain CAI14_04855 PF04616 Glycosyl hydrolases family 43 CAI14_04855 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CAI14_04860 PF00593 TonB dependent receptor CAI14_04860 PF07715 TonB-dependent Receptor Plug Domain CAI14_04865 PF00085 Thioredoxin CAI14_04870 PF07237 Protein of unknown function (DUF1428) CAI14_04875 PF13493 Domain of unknown function (DUF4118) CAI14_04875 PF00512 His Kinase A (phospho-acceptor) domain CAI14_04875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_04875 PF13492 GAF domain CAI14_04875 PF02702 Osmosensitive K+ channel His kinase sensor domain CAI14_04880 PF01339 CheB methylesterase CAI14_04885 PF01739 CheR methyltransferase, SAM binding domain CAI14_04885 PF03705 CheR methyltransferase, all-alpha domain CAI14_04890 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CAI14_04890 PF00072 Response regulator receiver domain CAI14_04890 PF01627 Hpt domain CAI14_04890 PF00512 His Kinase A (phospho-acceptor) domain CAI14_04890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_04890 PF00672 HAMP domain CAI14_04910 PF00072 Response regulator receiver domain CAI14_04920 PF06964 Alpha-L-arabinofuranosidase C-terminal domain CAI14_04925 PF01263 Aldose 1-epimerase CAI14_04930 PF01578 Cytochrome C assembly protein CAI14_04935 PF02978 Signal peptide binding domain CAI14_04935 PF02881 SRP54-type protein, helical bundle domain CAI14_04935 PF00448 SRP54-type protein, GTPase domain CAI14_04940 PF03060 Nitronate monooxygenase CAI14_04945 PF01063 Amino-transferase class IV CAI14_04950 PF00886 Ribosomal protein S16 CAI14_04955 PF05239 PRC-barrel domain CAI14_04955 PF01782 RimM N-terminal domain CAI14_04960 PF01746 tRNA (Guanine-1)-methyltransferase CAI14_04965 PF01245 Ribosomal protein L19 CAI14_04970 PF01554 MatE CAI14_04985 PF01479 S4 domain CAI14_04990 PF00141 Peroxidase CAI14_05000 PF01624 MutS domain I CAI14_05000 PF05188 MutS domain II CAI14_05000 PF05190 MutS family domain IV CAI14_05000 PF00488 MutS domain V CAI14_05000 PF05192 MutS domain III CAI14_05020 PF07715 TonB-dependent Receptor Plug Domain CAI14_05020 PF00593 TonB dependent receptor CAI14_05025 PF10609 NUBPL iron-transfer P-loop NTPase CAI14_05035 PF00692 dUTPase CAI14_05055 PF01738 Dienelactone hydrolase family CAI14_05240 PF00182 Chitinase class I CAI14_05295 PF01555 DNA methylase CAI14_05315 PF00817 impB/mucB/samB family CAI14_05315 PF13438 Domain of unknown function (DUF4113) CAI14_05315 PF11798 IMS family HHH motif CAI14_05315 PF11799 impB/mucB/samB family C-terminal domain CAI14_05320 PF00717 Peptidase S24-like CAI14_05330 PF18693 TRAM domain CAI14_05330 PF00919 Uncharacterized protein family UPF0004 CAI14_05330 PF04055 Radical SAM superfamily CAI14_05335 PF03449 Transcription elongation factor, N-terminal CAI14_05335 PF01272 Transcription elongation factor, GreA/GreB, C-term CAI14_05355 PF00293 NUDIX domain CAI14_05360 PF05872 Bacterial protein of unknown function (DUF853) CAI14_05375 PF02666 Phosphatidylserine decarboxylase CAI14_05380 PF02630 SCO1/SenC CAI14_05385 PF05175 Methyltransferase small domain CAI14_05390 PF01264 Chorismate synthase CAI14_05395 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CAI14_05395 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CAI14_05400 PF02774 Semialdehyde dehydrogenase, dimerisation domain CAI14_05400 PF01118 Semialdehyde dehydrogenase, NAD binding domain CAI14_05420 PF01416 tRNA pseudouridine synthase CAI14_05425 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CAI14_05430 PF03466 LysR substrate binding domain CAI14_05430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAI14_05435 PF00291 Pyridoxal-phosphate dependent enzyme CAI14_05445 PF00290 Tryptophan synthase alpha chain CAI14_05450 PF17848 Acetyl-coA carboxylase zinc finger domain CAI14_05450 PF01039 Carboxyl transferase domain CAI14_05455 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CAI14_05455 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CAI14_05455 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CAI14_05455 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CAI14_05470 PF00563 EAL domain CAI14_05470 PF00990 Diguanylate cyclase, GGDEF domain CAI14_05470 PF03707 Bacterial signalling protein N terminal repeat CAI14_05485 PF00106 short chain dehydrogenase CAI14_05490 PF00121 Triosephosphate isomerase CAI14_05505 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CAI14_05510 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CAI14_05515 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CAI14_05520 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CAI14_05530 PF10531 SLBB domain CAI14_05530 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CAI14_05530 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CAI14_05535 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal CAI14_05535 PF00384 Molybdopterin oxidoreductase CAI14_05535 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CAI14_05540 PF00146 NADH dehydrogenase CAI14_05545 PF12838 4Fe-4S dicluster domain CAI14_05550 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CAI14_05555 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CAI14_05560 PF00361 Proton-conducting membrane transporter CAI14_05560 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CAI14_05565 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus CAI14_05565 PF00361 Proton-conducting membrane transporter CAI14_05570 PF00361 Proton-conducting membrane transporter CAI14_05580 PF17384 RimP C-terminal SH3 domain CAI14_05580 PF02576 RimP N-terminal domain CAI14_05585 PF13184 NusA-like KH domain CAI14_05585 PF00575 S1 RNA binding domain CAI14_05585 PF08529 NusA N-terminal domain CAI14_05590 PF08364 Bacterial translation initiation factor IF-2 associated region CAI14_05590 PF00009 Elongation factor Tu GTP binding domain CAI14_05590 PF11987 Translation-initiation factor 2 CAI14_05590 PF04760 Translation initiation factor IF-2, N-terminal region CAI14_05595 PF02033 Ribosome-binding factor A CAI14_05600 PF09157 Pseudouridine synthase II TruB, C-terminal CAI14_05600 PF16198 tRNA pseudouridylate synthase B C-terminal domain CAI14_05600 PF01509 TruB family pseudouridylate synthase (N terminal domain) CAI14_05605 PF00312 Ribosomal protein S15 CAI14_05610 PF00013 KH domain CAI14_05610 PF00575 S1 RNA binding domain CAI14_05610 PF03725 3' exoribonuclease family, domain 2 CAI14_05610 PF01138 3' exoribonuclease family, domain 1 CAI14_05610 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CAI14_05620 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CAI14_05620 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CAI14_05630 PF00731 AIR carboxylase CAI14_05635 PF02222 ATP-grasp domain CAI14_05635 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CAI14_05640 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CAI14_05640 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CAI14_05645 PF00462 Glutaredoxin CAI14_05655 PF01914 MarC family integral membrane protein CAI14_05665 PF00593 TonB dependent receptor CAI14_05670 PF03641 Possible lysine decarboxylase CAI14_05670 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases CAI14_05670 PF11892 Domain of unknown function (DUF3412) CAI14_05675 PF07963 Prokaryotic N-terminal methylation motif CAI14_05675 PF00114 Pilin (bacterial filament) CAI14_05695 PF05567 Neisseria PilC beta-propeller domain CAI14_05725 PF04851 Type III restriction enzyme, res subunit CAI14_05725 PF02151 UvrB/uvrC motif CAI14_05725 PF12344 Ultra-violet resistance protein B CAI14_05725 PF17757 UvrB interaction domain CAI14_05725 PF00271 Helicase conserved C-terminal domain CAI14_05745 PF02534 Type IV secretory system Conjugative DNA transfer CAI14_05765 PF03743 Bacterial conjugation TrbI-like protein CAI14_05785 PF01464 Transglycosylase SLT domain CAI14_05810 PF00356 Bacterial regulatory proteins, lacI family CAI14_05815 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CAI14_05815 PF02824 TGS domain CAI14_05815 PF03129 Anticodon binding domain CAI14_05815 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CAI14_05820 PF05198 Translation initiation factor IF-3, N-terminal domain CAI14_05820 PF00707 Translation initiation factor IF-3, C-terminal domain CAI14_05825 PF01632 Ribosomal protein L35 CAI14_05830 PF00453 Ribosomal protein L20 CAI14_05835 PF01409 tRNA synthetases class II core domain (F) CAI14_05835 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CAI14_05840 PF01588 Putative tRNA binding domain CAI14_05840 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CAI14_05840 PF03484 tRNA synthetase B5 domain CAI14_05840 PF03483 B3/4 domain CAI14_05840 PF03147 Ferredoxin-fold anticodon binding domain CAI14_05845 PF00216 Bacterial DNA-binding protein CAI14_05850 PF13411 MerR HTH family regulatory protein CAI14_05870 PF02397 Bacterial sugar transferase CAI14_05890 PF00534 Glycosyl transferases group 1 CAI14_05890 PF13439 Glycosyltransferase Family 4 CAI14_05900 PF14667 Polysaccharide biosynthesis C-terminal domain CAI14_05915 PF03808 Glycosyl transferase WecB/TagA/CpsF family CAI14_05930 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CAI14_05930 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CAI14_05935 PF00753 Metallo-beta-lactamase superfamily CAI14_05935 PF16123 Hydroxyacylglutathione hydrolase C-terminus CAI14_05940 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family CAI14_05960 PF02779 Transketolase, pyrimidine binding domain CAI14_05960 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CAI14_05960 PF02780 Transketolase, C-terminal domain CAI14_05970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CAI14_05970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CAI14_05970 PF02770 Acyl-CoA dehydrogenase, middle domain CAI14_05970 PF12806 Acetyl-CoA dehydrogenase C-terminal like CAI14_05985 PF08212 Lipocalin-like domain CAI14_06030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_06030 PF00072 Response regulator receiver domain CAI14_06030 PF13426 PAS domain CAI14_06035 PF04362 Bacterial Fe(2+) trafficking CAI14_06040 PF00633 Helix-hairpin-helix motif CAI14_06040 PF10576 Iron-sulfur binding domain of endonuclease III CAI14_06040 PF14815 NUDIX domain CAI14_06040 PF00730 HhH-GPD superfamily base excision DNA repair protein CAI14_06050 PF00448 SRP54-type protein, GTPase domain CAI14_06050 PF02881 SRP54-type protein, helical bundle domain CAI14_06060 PF05544 Proline racemase CAI14_06065 PF01266 FAD dependent oxidoreductase CAI14_06075 PF04324 BFD-like [2Fe-2S] binding domain CAI14_06075 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAI14_06080 PF00701 Dihydrodipicolinate synthetase family CAI14_06085 PF00171 Aldehyde dehydrogenase family CAI14_06090 PF01321 Creatinase/Prolidase N-terminal domain CAI14_06090 PF00557 Metallopeptidase family M24 CAI14_06105 PF13520 Amino acid permease CAI14_06145 PF00593 TonB dependent receptor CAI14_06145 PF07715 TonB-dependent Receptor Plug Domain CAI14_06155 PF07532 Bacterial Ig-like domain (group 4) CAI14_06220 PF02794 RTX toxin acyltransferase family CAI14_06250 PF14883 Hypothetical glycosyl hydrolase family 13 CAI14_06250 PF01522 Polysaccharide deacetylase CAI14_06260 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CAI14_06260 PF17287 POTRA domain CAI14_06260 PF08479 POTRA domain, ShlB-type CAI14_06310 PF05860 haemagglutination activity domain CAI14_06310 PF13332 Hemagglutinin repeat CAI14_06310 PF05594 Haemagluttinin repeat CAI14_06310 PF13018 Extended Signal Peptide of Type V secretion system CAI14_06310 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain CAI14_06320 PF03447 Homoserine dehydrogenase, NAD binding domain CAI14_06320 PF00742 Homoserine dehydrogenase CAI14_06320 PF13840 ACT domain CAI14_06320 PF00696 Amino acid kinase family CAI14_06320 PF01842 ACT domain CAI14_06325 PF00288 GHMP kinases N terminal domain CAI14_06325 PF08544 GHMP kinases C terminal CAI14_06335 PF14821 Threonine synthase N terminus CAI14_06335 PF00291 Pyridoxal-phosphate dependent enzyme CAI14_06345 PF00027 Cyclic nucleotide-binding domain CAI14_06345 PF13545 Crp-like helix-turn-helix domain CAI14_06350 PF03129 Anticodon binding domain CAI14_06350 PF13393 Histidyl-tRNA synthetase CAI14_06360 PF08029 HisG, C-terminal domain CAI14_06360 PF01634 ATP phosphoribosyltransferase CAI14_06365 PF00815 Histidinol dehydrogenase CAI14_06370 PF00155 Aminotransferase class I and II CAI14_06375 PF00475 Imidazoleglycerol-phosphate dehydratase CAI14_06380 PF00117 Glutamine amidotransferase class-I CAI14_06385 PF00977 Histidine biosynthesis protein CAI14_06390 PF00977 Histidine biosynthesis protein CAI14_06395 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CAI14_06395 PF01502 Phosphoribosyl-AMP cyclohydrolase CAI14_06415 PF03079 ARD/ARD' family CAI14_06420 PF00596 Class II Aldolase and Adducin N-terminal domain CAI14_06425 PF13520 Amino acid permease CAI14_06430 PF13520 Amino acid permease CAI14_06440 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CAI14_06440 PF01842 ACT domain CAI14_06440 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CAI14_06445 PF01565 FAD binding domain CAI14_06445 PF02913 FAD linked oxidases, C-terminal domain CAI14_06465 PF09285 Elongation factor P, C-terminal CAI14_06465 PF01132 Elongation factor P (EF-P) OB domain CAI14_06465 PF08207 Elongation factor P (EF-P) KOW-like domain CAI14_06470 PF00106 short chain dehydrogenase CAI14_06475 PF00682 HMGL-like CAI14_06485 PF00378 Enoyl-CoA hydratase/isomerase CAI14_06495 PF07670 Nucleoside recognition CAI14_06495 PF02421 Ferrous iron transport protein B CAI14_06495 PF07664 Ferrous iron transport protein B C terminus CAI14_06515 PF03475 3-alpha domain CAI14_06515 PF03473 MOSC domain CAI14_06520 PF05173 Dihydrodipicolinate reductase, C-terminus CAI14_06520 PF01113 Dihydrodipicolinate reductase, N-terminus CAI14_06525 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CAI14_06525 PF00117 Glutamine amidotransferase class-I CAI14_06535 PF02142 MGS-like domain CAI14_06535 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CAI14_06535 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CAI14_06540 PF01272 Transcription elongation factor, GreA/GreB, C-term CAI14_06540 PF03449 Transcription elongation factor, N-terminal CAI14_06550 PF02272 DHHA1 domain CAI14_06550 PF01368 DHH family CAI14_06550 PF17768 RecJ OB domain CAI14_06600 PF04397 LytTr DNA-binding domain CAI14_06600 PF00072 Response regulator receiver domain CAI14_06610 PF01336 OB-fold nucleic acid binding domain CAI14_06610 PF00152 tRNA synthetases class II (D, K and N) CAI14_06615 PF00072 Response regulator receiver domain CAI14_06620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_06620 PF00512 His Kinase A (phospho-acceptor) domain CAI14_06620 PF01627 Hpt domain CAI14_06620 PF00072 Response regulator receiver domain CAI14_06625 PF00378 Enoyl-CoA hydratase/isomerase CAI14_06660 PF00501 AMP-binding enzyme CAI14_06660 PF13193 AMP-binding enzyme C-terminal domain CAI14_06670 PF00330 Aconitase family (aconitate hydratase) CAI14_06670 PF00694 Aconitase C-terminal domain CAI14_06685 PF06434 Aconitate hydratase 2 N-terminus CAI14_06685 PF11791 Aconitate B N-terminal domain CAI14_06685 PF00330 Aconitase family (aconitate hydratase) CAI14_06690 PF00561 alpha/beta hydrolase fold CAI14_06695 PF03707 Bacterial signalling protein N terminal repeat CAI14_06695 PF00563 EAL domain CAI14_06695 PF00990 Diguanylate cyclase, GGDEF domain CAI14_06700 PF00072 Response regulator receiver domain CAI14_06700 PF01339 CheB methylesterase CAI14_06705 PF03975 CheD chemotactic sensory transduction CAI14_06710 PF03705 CheR methyltransferase, all-alpha domain CAI14_06710 PF01739 CheR methyltransferase, SAM binding domain CAI14_06715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAI14_06715 PF00672 HAMP domain CAI14_06715 PF02203 Tar ligand binding domain homologue CAI14_06725 PF01584 CheW-like domain CAI14_06730 PF07317 Flagellar regulator YcgR CAI14_06730 PF07238 PilZ domain CAI14_06740 PF00672 HAMP domain CAI14_06740 PF02203 Tar ligand binding domain homologue CAI14_06740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAI14_06745 PF02203 Tar ligand binding domain homologue CAI14_06745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAI14_06745 PF00672 HAMP domain CAI14_06750 PF02203 Tar ligand binding domain homologue CAI14_06750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAI14_06750 PF00672 HAMP domain CAI14_06755 PF02203 Tar ligand binding domain homologue CAI14_06755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAI14_06755 PF00672 HAMP domain CAI14_06760 PF02203 Tar ligand binding domain homologue CAI14_06760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAI14_06760 PF00672 HAMP domain CAI14_06770 PF02203 Tar ligand binding domain homologue CAI14_06770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAI14_06770 PF00672 HAMP domain CAI14_06775 PF00672 HAMP domain CAI14_06775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAI14_06775 PF02203 Tar ligand binding domain homologue CAI14_06785 PF00672 HAMP domain CAI14_06785 PF02203 Tar ligand binding domain homologue CAI14_06785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAI14_06790 PF02203 Tar ligand binding domain homologue CAI14_06790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAI14_06790 PF00672 HAMP domain CAI14_06805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAI14_06805 PF02203 Tar ligand binding domain homologue CAI14_06805 PF00672 HAMP domain CAI14_06810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAI14_06810 PF08269 Cache domain CAI14_06810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAI14_06810 PF08269 Cache domain CAI14_06820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAI14_06820 PF00672 HAMP domain CAI14_06820 PF02203 Tar ligand binding domain homologue CAI14_06825 PF02895 Signal transducing histidine kinase, homodimeric domain CAI14_06825 PF09078 CheY binding CAI14_06825 PF01584 CheW-like domain CAI14_06825 PF01627 Hpt domain CAI14_06825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_06830 PF00072 Response regulator receiver domain CAI14_06840 PF01584 CheW-like domain CAI14_06845 PF13614 AAA domain CAI14_06850 PF00691 OmpA family CAI14_06850 PF13677 Membrane MotB of proton-channel complex MotA/MotB CAI14_06855 PF01618 MotA/TolQ/ExbB proton channel family CAI14_06895 PF04055 Radical SAM superfamily CAI14_06895 PF13186 Iron-sulfur cluster-binding domain CAI14_06905 PF00072 Response regulator receiver domain CAI14_06905 PF01584 CheW-like domain CAI14_06905 PF02895 Signal transducing histidine kinase, homodimeric domain CAI14_06905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_06905 PF01627 Hpt domain CAI14_06910 PF04344 Chemotaxis phosphatase, CheZ CAI14_06915 PF00072 Response regulator receiver domain CAI14_06920 PF04545 Sigma-70, region 4 CAI14_06920 PF04539 Sigma-70 region 3 CAI14_06920 PF04542 Sigma-70 region 2 CAI14_06925 PF10609 NUBPL iron-transfer P-loop NTPase CAI14_06930 PF00448 SRP54-type protein, GTPase domain CAI14_06935 PF00771 FHIPEP family CAI14_06940 PF01312 FlhB HrpN YscU SpaS Family CAI14_06960 PF00563 EAL domain CAI14_06960 PF03707 Bacterial signalling protein N terminal repeat CAI14_06960 PF13188 PAS domain CAI14_06960 PF00990 Diguanylate cyclase, GGDEF domain CAI14_06965 PF01311 Bacterial export proteins, family 1 CAI14_06970 PF01313 Bacterial export proteins, family 3 CAI14_06975 PF00813 FliP family CAI14_06985 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CAI14_06990 PF02154 Flagellar motor switch protein FliM CAI14_06990 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CAI14_07010 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CAI14_07010 PF18269 T3SS EscN ATPase C-terminal domain CAI14_07020 PF14841 FliG middle domain CAI14_07020 PF14842 FliG N-terminal domain CAI14_07020 PF01706 FliG C-terminal domain CAI14_07025 PF08345 Flagellar M-ring protein C-terminal CAI14_07025 PF01514 Secretory protein of YscJ/FliF family CAI14_07030 PF02049 Flagellar hook-basal body complex protein FliE CAI14_07035 PF00534 Glycosyl transferases group 1 CAI14_07035 PF00535 Glycosyl transferase family 2 CAI14_07120 PF06490 Flagellar regulatory protein FleQ CAI14_07120 PF02954 Bacterial regulatory protein, Fis family CAI14_07120 PF00158 Sigma-54 interaction domain CAI14_07125 PF00072 Response regulator receiver domain CAI14_07125 PF01339 CheB methylesterase CAI14_07130 PF04552 Sigma-54, DNA binding domain CAI14_07130 PF04963 Sigma-54 factor, core binding domain CAI14_07130 PF00309 Sigma-54 factor, Activator interacting domain (AID) CAI14_07135 PF00072 Response regulator receiver domain CAI14_07135 PF00196 Bacterial regulatory proteins, luxR family CAI14_07150 PF02561 Flagellar protein FliS CAI14_07155 PF02465 Flagellar hook-associated protein 2 N-terminus CAI14_07155 PF07195 Flagellar hook-associated protein 2 C-terminus CAI14_07155 PF07196 Flagellin hook IN motif CAI14_07160 PF00669 Bacterial flagellin N-terminal helical region CAI14_07160 PF00700 Bacterial flagellin C-terminal helical region CAI14_07165 PF00669 Bacterial flagellin N-terminal helical region CAI14_07165 PF00700 Bacterial flagellin C-terminal helical region CAI14_07170 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CAI14_07170 PF07196 Flagellin hook IN motif CAI14_07175 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CAI14_07175 PF10135 Rod binding protein CAI14_07180 PF02119 Flagellar P-ring protein CAI14_07185 PF02107 Flagellar L-ring protein CAI14_07190 PF00460 Flagella basal body rod protein CAI14_07190 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CAI14_07200 PF00460 Flagella basal body rod protein CAI14_07200 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CAI14_07210 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CAI14_07210 PF07559 Flagellar basal body protein FlaE CAI14_07210 PF00460 Flagella basal body rod protein CAI14_07215 PF03963 Flagellar hook capping protein - N-terminal region CAI14_07220 PF00460 Flagella basal body rod protein CAI14_07220 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CAI14_07230 PF00072 Response regulator receiver domain CAI14_07230 PF01584 CheW-like domain CAI14_07250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_07250 PF00512 His Kinase A (phospho-acceptor) domain CAI14_07250 PF00989 PAS fold CAI14_07250 PF13188 PAS domain CAI14_07250 PF13426 PAS domain CAI14_07255 PF00563 EAL domain CAI14_07255 PF03707 Bacterial signalling protein N terminal repeat CAI14_07255 PF00990 Diguanylate cyclase, GGDEF domain CAI14_07260 PF07730 Histidine kinase CAI14_07260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_07275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAI14_07275 PF00672 HAMP domain CAI14_07275 PF12729 Four helix bundle sensory module for signal transduction CAI14_07280 PF04356 Protein of unknown function (DUF489) CAI14_07290 PF00293 NUDIX domain CAI14_07295 PF02617 ATP-dependent Clp protease adaptor protein ClpS CAI14_07300 PF07724 AAA domain (Cdc48 subfamily) CAI14_07300 PF10431 C-terminal, D2-small domain, of ClpB protein CAI14_07300 PF02861 Clp amino terminal domain, pathogenicity island component CAI14_07300 PF17871 AAA lid domain CAI14_07300 PF00004 ATPase family associated with various cellular activities (AAA) CAI14_07305 PF01176 Translation initiation factor 1A / IF-1 CAI14_07310 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CAI14_07320 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAI14_07325 PF09397 Ftsk gamma domain CAI14_07325 PF01580 FtsK/SpoIIIE family CAI14_07325 PF17854 FtsK alpha domain CAI14_07325 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CAI14_07335 PF03548 Outer membrane lipoprotein carrier protein LolA CAI14_07345 PF00004 ATPase family associated with various cellular activities (AAA) CAI14_07345 PF16193 AAA C-terminal domain CAI14_07345 PF12002 MgsA AAA+ ATPase C terminal CAI14_07350 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CAI14_07360 PF02803 Thiolase, C-terminal domain CAI14_07360 PF00108 Thiolase, N-terminal domain CAI14_07365 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CAI14_07365 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CAI14_07365 PF00378 Enoyl-CoA hydratase/isomerase CAI14_07375 PF00334 Nucleoside diphosphate kinase CAI14_07380 PF04055 Radical SAM superfamily CAI14_07390 PF13464 Domain of unknown function (DUF4115) CAI14_07400 PF01011 PQQ enzyme repeat CAI14_07400 PF13360 PQQ-like domain CAI14_07405 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CAI14_07405 PF01926 50S ribosome-binding GTPase CAI14_07410 PF03453 MoeA N-terminal region (domain I and II) CAI14_07410 PF03454 MoeA C-terminal region (domain IV) CAI14_07410 PF00994 Probable molybdopterin binding domain CAI14_07420 PF00899 ThiF family CAI14_07450 PF00107 Zinc-binding dehydrogenase CAI14_07450 PF08240 Alcohol dehydrogenase GroES-like domain CAI14_07450 PF13823 Alcohol dehydrogenase GroES-associated CAI14_07460 PF03372 Endonuclease/Exonuclease/phosphatase family CAI14_07475 PF12804 MobA-like NTP transferase domain CAI14_07485 PF10414 Sirohaem synthase dimerisation region CAI14_07485 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CAI14_07485 PF14824 Sirohaem biosynthesis protein central CAI14_07525 PF05974 Domain of unknown function (DUF892) CAI14_07555 PF00072 Response regulator receiver domain CAI14_07555 PF00196 Bacterial regulatory proteins, luxR family CAI14_07560 PF00072 Response regulator receiver domain CAI14_07560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_07560 PF00512 His Kinase A (phospho-acceptor) domain CAI14_07560 PF13426 PAS domain CAI14_07560 PF08448 PAS fold CAI14_07570 PF00873 AcrB/AcrD/AcrF family CAI14_07575 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CAI14_07575 PF00529 HlyD membrane-fusion protein of T1SS CAI14_07585 PF00082 Subtilase family CAI14_07585 PF03797 Autotransporter beta-domain CAI14_07605 PF07690 Major Facilitator Superfamily CAI14_07610 PF00072 Response regulator receiver domain CAI14_07615 PF00072 Response regulator receiver domain CAI14_07615 PF01627 Hpt domain CAI14_07615 PF00512 His Kinase A (phospho-acceptor) domain CAI14_07615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_07615 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CAI14_07615 PF00672 HAMP domain CAI14_07620 PF04286 Protein of unknown function (DUF445) CAI14_07630 PF00202 Aminotransferase class-III CAI14_07645 PF07690 Major Facilitator Superfamily CAI14_07650 PF02634 FdhD/NarQ family CAI14_07655 PF00384 Molybdopterin oxidoreductase CAI14_07665 PF07690 Major Facilitator Superfamily CAI14_07665 PF00083 Sugar (and other) transporter CAI14_07670 PF01814 Hemerythrin HHE cation binding domain CAI14_07675 PF00072 Response regulator receiver domain CAI14_07675 PF00990 Diguanylate cyclase, GGDEF domain CAI14_07680 PF01266 FAD dependent oxidoreductase CAI14_07685 PF00120 Glutamine synthetase, catalytic domain CAI14_07690 PF07722 Peptidase C26 CAI14_07695 PF00120 Glutamine synthetase, catalytic domain CAI14_07700 PF00202 Aminotransferase class-III CAI14_07705 PF13416 Bacterial extracellular solute-binding protein CAI14_07710 PF13533 Biotin-lipoyl like CAI14_07715 PF07690 Major Facilitator Superfamily CAI14_07720 PF02321 Outer membrane efflux protein CAI14_07725 PF08402 TOBE domain CAI14_07725 PF00005 ABC transporter CAI14_07730 PF00528 Binding-protein-dependent transport system inner membrane component CAI14_07735 PF00528 Binding-protein-dependent transport system inner membrane component CAI14_07740 PF00171 Aldehyde dehydrogenase family CAI14_07755 PF00571 CBS domain CAI14_07755 PF03471 Transporter associated domain CAI14_07765 PF02130 Uncharacterized protein family UPF0054 CAI14_07775 PF02562 PhoH-like protein CAI14_07780 PF04055 Radical SAM superfamily CAI14_07780 PF01938 TRAM domain CAI14_07780 PF00919 Uncharacterized protein family UPF0004 CAI14_07795 PF01464 Transglycosylase SLT domain CAI14_07810 PF00033 Cytochrome b/b6/petB CAI14_07810 PF00032 Cytochrome b(C-terminal)/b6/petD CAI14_07815 PF02167 Cytochrome C1 family CAI14_07820 PF02798 Glutathione S-transferase, N-terminal domain CAI14_07820 PF00043 Glutathione S-transferase, C-terminal domain CAI14_07825 PF04386 Stringent starvation protein B CAI14_07845 PF00271 Helicase conserved C-terminal domain CAI14_07845 PF00270 DEAD/DEAH box helicase CAI14_07845 PF08494 DEAD/H associated CAI14_07850 PF02245 Methylpurine-DNA glycosylase (MPG) CAI14_07855 PF02743 Cache domain CAI14_07855 PF00672 HAMP domain CAI14_07855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAI14_07860 PF01584 CheW-like domain CAI14_07890 PF00570 HRDC domain CAI14_07890 PF01612 3'-5' exonuclease CAI14_07900 PF03781 Sulfatase-modifying factor enzyme 1 CAI14_07915 PF02601 Exonuclease VII, large subunit CAI14_07915 PF13742 OB-fold nucleic acid binding domain CAI14_07920 PF08331 Domain of unknown function (DUF1730) CAI14_07925 PF01256 Carbohydrate kinase CAI14_07925 PF03853 YjeF-related protein N-terminus CAI14_07930 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CAI14_07935 PF11741 AMIN domain CAI14_07935 PF01520 N-acetylmuramoyl-L-alanine amidase CAI14_07940 PF01119 DNA mismatch repair protein, C-terminal domain CAI14_07940 PF08676 MutL C terminal dimerisation domain CAI14_07960 PF05233 PHB accumulation regulatory domain CAI14_07960 PF07879 PHB/PHA accumulation regulator DNA-binding domain CAI14_07970 PF00749 tRNA synthetases class I (E and Q), catalytic domain CAI14_07980 PF00239 Resolvase, N terminal domain CAI14_07980 PF02796 Helix-turn-helix domain of resolvase CAI14_08020 PF07152 YaeQ protein CAI14_08025 PF00313 'Cold-shock' DNA-binding domain CAI14_08030 PF14497 Glutathione S-transferase, C-terminal domain CAI14_08030 PF02798 Glutathione S-transferase, N-terminal domain CAI14_08040 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CAI14_08045 PF00156 Phosphoribosyl transferase domain CAI14_08050 PF03880 DbpA RNA binding domain CAI14_08050 PF00270 DEAD/DEAH box helicase CAI14_08050 PF00271 Helicase conserved C-terminal domain CAI14_08070 PF00545 ribonuclease CAI14_08075 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CAI14_08075 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CAI14_08080 PF00459 Inositol monophosphatase family CAI14_08085 PF00588 SpoU rRNA Methylase family CAI14_08095 PF00563 EAL domain CAI14_08095 PF13188 PAS domain CAI14_08095 PF03707 Bacterial signalling protein N terminal repeat CAI14_08095 PF00990 Diguanylate cyclase, GGDEF domain CAI14_08100 PF04055 Radical SAM superfamily CAI14_08105 PF01132 Elongation factor P (EF-P) OB domain CAI14_08105 PF08207 Elongation factor P (EF-P) KOW-like domain CAI14_08105 PF09285 Elongation factor P, C-terminal CAI14_08115 PF01979 Amidohydrolase family CAI14_08125 PF13419 Haloacid dehalogenase-like hydrolase CAI14_08135 PF00295 Glycosyl hydrolases family 28 CAI14_08180 PF00753 Metallo-beta-lactamase superfamily CAI14_08190 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CAI14_08195 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CAI14_08220 PF01979 Amidohydrolase family CAI14_08225 PF01809 Putative membrane protein insertion efficiency factor CAI14_08230 PF01258 Prokaryotic dksA/traR C4-type zinc finger CAI14_08240 PF02657 Fe-S metabolism associated domain CAI14_08245 PF01406 tRNA synthetases class I (C) catalytic domain CAI14_08245 PF09190 DALR domain CAI14_08255 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CAI14_08255 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CAI14_08260 PF00764 Arginosuccinate synthase CAI14_08270 PF01546 Peptidase family M20/M25/M40 CAI14_08270 PF07687 Peptidase dimerisation domain CAI14_08275 PF00696 Amino acid kinase family CAI14_08275 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase CAI14_08285 PF01118 Semialdehyde dehydrogenase, NAD binding domain CAI14_08290 PF00206 Lyase CAI14_08300 PF01472 PUA domain CAI14_08300 PF00696 Amino acid kinase family CAI14_08305 PF00171 Aldehyde dehydrogenase family CAI14_08315 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CAI14_08315 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CAI14_08330 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CAI14_08340 PF02322 Cytochrome bd terminal oxidase subunit II CAI14_08345 PF01654 Cytochrome bd terminal oxidase subunit I CAI14_08350 PF00664 ABC transporter transmembrane region CAI14_08350 PF00005 ABC transporter CAI14_08355 PF00664 ABC transporter transmembrane region CAI14_08355 PF00005 ABC transporter CAI14_08360 PF00313 'Cold-shock' DNA-binding domain CAI14_08365 PF00561 alpha/beta hydrolase fold CAI14_08375 PF03918 Cytochrome C biogenesis protein CAI14_08380 PF08534 Redoxin CAI14_08385 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CAI14_08385 PF01578 Cytochrome C assembly protein CAI14_08390 PF03100 CcmE CAI14_08400 PF01578 Cytochrome C assembly protein CAI14_08405 PF03379 CcmB protein CAI14_08410 PF00005 ABC transporter CAI14_08415 PF00155 Aminotransferase class I and II CAI14_08420 PF00795 Carbon-nitrogen hydrolase CAI14_08435 PF00849 RNA pseudouridylate synthase CAI14_08435 PF01479 S4 domain CAI14_08440 PF04079 Segregation and condensation complex subunit ScpB CAI14_08445 PF02616 Segregation and condensation protein ScpA CAI14_08450 PF03795 YCII-related domain CAI14_08460 PF00356 Bacterial regulatory proteins, lacI family CAI14_08480 PF00528 Binding-protein-dependent transport system inner membrane component CAI14_08485 PF00528 Binding-protein-dependent transport system inner membrane component CAI14_08510 PF00795 Carbon-nitrogen hydrolase CAI14_08515 PF04371 Porphyromonas-type peptidyl-arginine deiminase CAI14_08530 PF00444 Ribosomal protein L36 CAI14_08535 PF02224 Cytidylate kinase CAI14_08540 PF00575 S1 RNA binding domain CAI14_08545 PF00216 Bacterial DNA-binding protein CAI14_08555 PF18073 Rubredoxin metal binding domain CAI14_08560 PF00953 Glycosyl transferase family 4 CAI14_08565 PF02719 Polysaccharide biosynthesis protein CAI14_08570 PF00483 Nucleotidyl transferase CAI14_08580 PF00999 Sodium/hydrogen exchanger family CAI14_08580 PF02254 TrkA-N domain CAI14_08590 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CAI14_08590 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CAI14_08595 PF00571 CBS domain CAI14_08595 PF00478 IMP dehydrogenase / GMP reductase domain CAI14_08600 PF00117 Glutamine amidotransferase class-I CAI14_08600 PF02540 NAD synthase CAI14_08600 PF00958 GMP synthase C terminal domain CAI14_08605 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) CAI14_08610 PF00361 Proton-conducting membrane transporter CAI14_08610 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus CAI14_08610 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CAI14_08615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAI14_08615 PF03466 LysR substrate binding domain CAI14_08635 PF00196 Bacterial regulatory proteins, luxR family CAI14_08635 PF00072 Response regulator receiver domain CAI14_08650 PF00857 Isochorismatase family CAI14_08675 PF05977 Transmembrane secretion effector CAI14_08690 PF00561 alpha/beta hydrolase fold CAI14_08695 PF01566 Natural resistance-associated macrophage protein CAI14_08700 PF01325 Iron dependent repressor, N-terminal DNA binding domain CAI14_08700 PF02742 Iron dependent repressor, metal binding and dimerisation domain CAI14_08705 PF14437 MafB19-like deaminase CAI14_08710 PF00929 Exonuclease CAI14_08740 PF00239 Resolvase, N terminal domain CAI14_08740 PF02796 Helix-turn-helix domain of resolvase CAI14_08825 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CAI14_08850 PF05552 Conserved TM helix CAI14_08850 PF00924 Mechanosensitive ion channel CAI14_08855 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CAI14_08855 PF00391 PEP-utilising enzyme, mobile domain CAI14_08855 PF02896 PEP-utilising enzyme, TIM barrel domain CAI14_08860 PF03618 Kinase/pyrophosphorylase CAI14_08880 PF01066 CDP-alcohol phosphatidyltransferase CAI14_08890 PF00561 alpha/beta hydrolase fold CAI14_08905 PF01266 FAD dependent oxidoreductase CAI14_08905 PF00355 Rieske [2Fe-2S] domain CAI14_08915 PF17674 HHH domain CAI14_08915 PF09371 Tex-like protein N-terminal domain CAI14_08915 PF16921 Tex protein YqgF-like domain CAI14_08915 PF00575 S1 RNA binding domain CAI14_08920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_08920 PF00072 Response regulator receiver domain CAI14_08920 PF00512 His Kinase A (phospho-acceptor) domain CAI14_08920 PF09308 LuxQ, periplasmic CAI14_08965 PF00034 Cytochrome c CAI14_08980 PF00873 AcrB/AcrD/AcrF family CAI14_08985 PF00873 AcrB/AcrD/AcrF family CAI14_08995 PF01081 KDPG and KHG aldolase CAI14_09000 PF00920 Dehydratase family CAI14_09005 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CAI14_09010 PF02685 Glucokinase CAI14_09015 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CAI14_09015 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CAI14_09020 PF00005 ABC transporter CAI14_09020 PF17912 MalK OB fold domain CAI14_09035 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CAI14_09040 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CAI14_09045 PF02910 Fumarate reductase flavoprotein C-term CAI14_09045 PF00890 FAD binding domain CAI14_09055 PF13085 2Fe-2S iron-sulfur cluster binding domain CAI14_09055 PF13237 4Fe-4S dicluster domain CAI14_09060 PF03937 Flavinator of succinate dehydrogenase CAI14_09070 PF12704 MacB-like periplasmic core domain CAI14_09070 PF02687 FtsX-like permease family CAI14_09075 PF00005 ABC transporter CAI14_09085 PF00753 Metallo-beta-lactamase superfamily CAI14_09085 PF03772 Competence protein CAI14_09090 PF01618 MotA/TolQ/ExbB proton channel family CAI14_09100 PF00664 ABC transporter transmembrane region CAI14_09100 PF00005 ABC transporter CAI14_09105 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CAI14_09110 PF02348 Cytidylyltransferase CAI14_09115 PF01451 Low molecular weight phosphotyrosine protein phosphatase CAI14_09125 PF02151 UvrB/uvrC motif CAI14_09125 PF01541 GIY-YIG catalytic domain CAI14_09125 PF08459 UvrC Helix-hairpin-helix N-terminal CAI14_09130 PF01066 CDP-alcohol phosphatidyltransferase CAI14_09210 PF00668 Condensation domain CAI14_09210 PF13193 AMP-binding enzyme C-terminal domain CAI14_09210 PF00501 AMP-binding enzyme CAI14_09210 PF00975 Thioesterase domain CAI14_09210 PF00550 Phosphopantetheine attachment site CAI14_09225 PF01648 4'-phosphopantetheinyl transferase superfamily CAI14_09225 PF17837 4'-phosphopantetheinyl transferase N-terminal domain CAI14_09235 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CAI14_09235 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CAI14_09235 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CAI14_09245 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CAI14_09260 PF00196 Bacterial regulatory proteins, luxR family CAI14_09260 PF00072 Response regulator receiver domain CAI14_09265 PF12111 Polyribonucleotide phosphorylase C terminal CAI14_09265 PF10150 Ribonuclease E/G family CAI14_09265 PF00575 S1 RNA binding domain CAI14_09270 PF00849 RNA pseudouridylate synthase CAI14_09270 PF01479 S4 domain CAI14_09275 PF11737 Protein of unknown function (DUF3300) CAI14_09280 PF02535 ZIP Zinc transporter CAI14_09290 PF01329 Pterin 4 alpha carbinolamine dehydratase CAI14_09295 PF01106 NifU-like domain CAI14_09310 PF01526 Tn3 transposase DDE domain CAI14_09310 PF13700 Domain of unknown function (DUF4158) CAI14_09385 PF12697 Alpha/beta hydrolase family CAI14_09385 PF08241 Methyltransferase domain CAI14_09420 PF00106 short chain dehydrogenase CAI14_09425 PF00881 Nitroreductase family CAI14_09435 PF01494 FAD binding domain CAI14_09440 PF09335 SNARE associated Golgi protein CAI14_09475 PF05088 Bacterial NAD-glutamate dehydrogenase CAI14_09485 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CAI14_09485 PF00529 HlyD membrane-fusion protein of T1SS CAI14_09490 PF00873 AcrB/AcrD/AcrF family CAI14_09500 PF00356 Bacterial regulatory proteins, lacI family CAI14_09505 PF00381 PTS HPr component phosphorylation site CAI14_09505 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CAI14_09505 PF05524 PEP-utilising enzyme, N-terminal CAI14_09505 PF02896 PEP-utilising enzyme, TIM barrel domain CAI14_09505 PF00391 PEP-utilising enzyme, mobile domain CAI14_09510 PF00294 pfkB family carbohydrate kinase CAI14_09515 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CAI14_09560 PF07549 SecD/SecF GG Motif CAI14_09560 PF02355 Protein export membrane protein CAI14_09565 PF02355 Protein export membrane protein CAI14_09565 PF07549 SecD/SecF GG Motif CAI14_09565 PF13721 SecD export protein N-terminal TM region CAI14_09570 PF02699 Preprotein translocase subunit CAI14_09575 PF01702 Queuine tRNA-ribosyltransferase CAI14_09580 PF02547 Queuosine biosynthesis protein CAI14_09625 PF00759 Glycosyl hydrolase family 9 CAI14_09625 PF02927 Cellulase N-terminal ig-like domain CAI14_09635 PF00037 4Fe-4S binding domain CAI14_09650 PF01467 Cytidylyltransferase-like CAI14_09660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_09660 PF00183 Hsp90 protein CAI14_09690 PF00171 Aldehyde dehydrogenase family CAI14_09710 PF01180 Dihydroorotate dehydrogenase CAI14_09715 PF01565 FAD binding domain CAI14_09715 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CAI14_09730 PF07690 Major Facilitator Superfamily CAI14_09745 PF01569 PAP2 superfamily CAI14_09765 PF00072 Response regulator receiver domain CAI14_09770 PF02013 Cellulose or protein binding domain CAI14_09770 PF00150 Cellulase (glycosyl hydrolase family 5) CAI14_09780 PF00563 EAL domain CAI14_09780 PF01590 GAF domain CAI14_09780 PF00990 Diguanylate cyclase, GGDEF domain CAI14_09780 PF00360 Phytochrome region CAI14_09795 PF14310 Fibronectin type III-like domain CAI14_09795 PF01915 Glycosyl hydrolase family 3 C-terminal domain CAI14_09795 PF00933 Glycosyl hydrolase family 3 N terminal domain CAI14_09825 PF02261 Aspartate decarboxylase CAI14_09830 PF02569 Pantoate-beta-alanine ligase CAI14_09835 PF02548 Ketopantoate hydroxymethyltransferase CAI14_09840 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CAI14_09845 PF12627 Probable RNA and SrmB- binding site of polymerase A CAI14_09845 PF12626 Polymerase A arginine-rich C-terminus CAI14_09845 PF01743 Poly A polymerase head domain CAI14_09855 PF02649 Type I GTP cyclohydrolase folE2 CAI14_09860 PF01520 N-acetylmuramoyl-L-alanine amidase CAI14_09880 PF00083 Sugar (and other) transporter CAI14_09890 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CAI14_09890 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CAI14_09900 PF16338 Domain of unknown function (DUF4968) CAI14_09900 PF01055 Glycosyl hydrolases family 31 CAI14_09900 PF17137 Domain of unknown function (DUF5110) CAI14_09915 PF03442 Carbohydrate binding domain X2 CAI14_09915 PF00942 Cellulose binding domain CAI14_09930 PF03466 LysR substrate binding domain CAI14_09930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAI14_09940 PF01081 KDPG and KHG aldolase CAI14_09945 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CAI14_09945 PF13378 Enolase C-terminal domain-like CAI14_09950 PF08450 SMP-30/Gluconolactonase/LRE-like region CAI14_09955 PF05035 2-keto-3-deoxy-galactonokinase CAI14_09960 PF11953 Domain of unknown function (DUF3470) CAI14_09960 PF00037 4Fe-4S binding domain CAI14_09970 PF00701 Dihydrodipicolinate synthetase family CAI14_09985 PF00578 AhpC/TSA family CAI14_09990 PF13638 PIN domain CAI14_09990 PF02562 PhoH-like protein CAI14_10005 PF08543 Phosphomethylpyrimidine kinase CAI14_10030 PF03466 LysR substrate binding domain CAI14_10030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAI14_10035 PF17954 Quercetinase C-terminal cupin domain CAI14_10035 PF02678 Pirin CAI14_10040 PF08447 PAS fold CAI14_10040 PF13426 PAS domain CAI14_10040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAI14_10055 PF02599 Global regulator protein family CAI14_10060 PF01411 tRNA synthetases class II (A) CAI14_10060 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CAI14_10060 PF02272 DHHA1 domain CAI14_10065 PF02631 RecX family CAI14_10075 PF00154 recA bacterial DNA recombination protein CAI14_10080 PF00717 Peptidase S24-like CAI14_10080 PF01726 LexA DNA binding domain CAI14_10085 PF03109 ABC1 family CAI14_10090 PF02464 Competence-damaged protein CAI14_10095 PF01926 50S ribosome-binding GTPase CAI14_10095 PF13167 GTP-binding GTPase N-terminal CAI14_10095 PF16360 GTP-binding GTPase Middle Region CAI14_10100 PF17209 Hfq protein CAI14_10110 PF00809 Pterin binding enzyme CAI14_10115 PF01434 Peptidase family M41 CAI14_10115 PF06480 FtsH Extracellular CAI14_10115 PF00004 ATPase family associated with various cellular activities (AAA) CAI14_10115 PF17862 AAA+ lid domain CAI14_10120 PF01728 FtsJ-like methyltransferase CAI14_10125 PF01985 CRS1 / YhbY (CRM) domain CAI14_10130 PF04430 Protein of unknown function (DUF498/DUF598) CAI14_10135 PF01476 LysM domain CAI14_10135 PF01551 Peptidase family M23 CAI14_10140 PF09335 SNARE associated Golgi protein CAI14_10150 PF01975 Survival protein SurE CAI14_10155 PF01713 Smr domain CAI14_10160 PF01142 tRNA pseudouridine synthase D (TruD) CAI14_10165 PF02542 YgbB family CAI14_10170 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CAI14_10175 PF04977 Septum formation initiator CAI14_10180 PF03952 Enolase, N-terminal domain CAI14_10180 PF00113 Enolase, C-terminal TIM barrel domain CAI14_10190 PF00793 DAHP synthetase I family CAI14_10195 PF06418 CTP synthase N-terminus CAI14_10195 PF00117 Glutamine amidotransferase class-I CAI14_10205 PF00204 DNA gyrase B CAI14_10205 PF00986 DNA gyrase B subunit, carboxyl terminus CAI14_10205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_10205 PF01751 Toprim domain CAI14_10220 PF01384 Phosphate transporter family CAI14_10235 PF01595 Cyclin M transmembrane N-terminal domain CAI14_10235 PF03471 Transporter associated domain CAI14_10235 PF00571 CBS domain CAI14_10250 PF00296 Luciferase-like monooxygenase CAI14_10255 PF07690 Major Facilitator Superfamily CAI14_10260 PF00664 ABC transporter transmembrane region CAI14_10260 PF00005 ABC transporter CAI14_10265 PF00005 ABC transporter CAI14_10305 PF08241 Methyltransferase domain CAI14_10320 PF00535 Glycosyl transferase family 2 CAI14_10325 PF01943 Polysaccharide biosynthesis protein CAI14_10330 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CAI14_10350 PF05523 WxcM-like, C-terminal CAI14_10365 PF00034 Cytochrome c CAI14_10380 PF04542 Sigma-70 region 2 CAI14_10380 PF08281 Sigma-70, region 4 CAI14_10390 PF00082 Subtilase family CAI14_10395 PF01578 Cytochrome C assembly protein CAI14_10405 PF03100 CcmE CAI14_10410 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CAI14_10410 PF01578 Cytochrome C assembly protein CAI14_10415 PF08534 Redoxin CAI14_10420 PF03918 Cytochrome C biogenesis protein CAI14_10430 PF00072 Response regulator receiver domain CAI14_10430 PF13426 PAS domain CAI14_10430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_10435 PF06745 KaiC CAI14_10445 PF00512 His Kinase A (phospho-acceptor) domain CAI14_10445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_10445 PF00672 HAMP domain CAI14_10445 PF01627 Hpt domain CAI14_10445 PF00072 Response regulator receiver domain CAI14_10445 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CAI14_10450 PF08448 PAS fold CAI14_10450 PF13188 PAS domain CAI14_10450 PF00512 His Kinase A (phospho-acceptor) domain CAI14_10450 PF00072 Response regulator receiver domain CAI14_10450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_10465 PF01494 FAD binding domain CAI14_10470 PF02203 Tar ligand binding domain homologue CAI14_10470 PF00672 HAMP domain CAI14_10470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAI14_10495 PF03466 LysR substrate binding domain CAI14_10495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAI14_10500 PF02525 Flavodoxin-like fold CAI14_10505 PF02403 Seryl-tRNA synthetase N-terminal domain CAI14_10505 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CAI14_10520 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CAI14_10525 PF01842 ACT domain CAI14_10525 PF01817 Chorismate mutase type II CAI14_10525 PF00800 Prephenate dehydratase CAI14_10530 PF00266 Aminotransferase class-V CAI14_10535 PF00174 Oxidoreductase molybdopterin binding domain CAI14_10540 PF01794 Ferric reductase like transmembrane component CAI14_10565 PF07702 UTRA domain CAI14_10565 PF00392 Bacterial regulatory proteins, gntR family CAI14_10580 PF07969 Amidohydrolase family CAI14_10585 PF00221 Aromatic amino acid lyase CAI14_10595 PF01175 Urocanase Rossmann-like domain CAI14_10595 PF17392 Urocanase C-terminal domain CAI14_10595 PF17391 Urocanase N-terminal domain CAI14_10610 PF13360 PQQ-like domain CAI14_10615 PF00521 DNA gyrase/topoisomerase IV, subunit A CAI14_10615 PF03989 DNA gyrase C-terminal domain, beta-propeller CAI14_10620 PF01008 Initiation factor 2 subunit family CAI14_10635 PF00152 tRNA synthetases class II (D, K and N) CAI14_10640 PF00533 BRCA1 C Terminus (BRCT) domain CAI14_10640 PF01653 NAD-dependent DNA ligase adenylation domain CAI14_10640 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CAI14_10640 PF12826 Helix-hairpin-helix motif CAI14_10640 PF03120 NAD-dependent DNA ligase OB-fold domain CAI14_10645 PF00155 Aminotransferase class I and II CAI14_10655 PF04354 ZipA, C-terminal FtsZ-binding domain CAI14_10660 PF02463 RecF/RecN/SMC N terminal domain CAI14_10665 PF03948 Ribosomal protein L9, C-terminal domain CAI14_10665 PF01281 Ribosomal protein L9, N-terminal domain CAI14_10670 PF01084 Ribosomal protein S18 CAI14_10675 PF01250 Ribosomal protein S6 CAI14_10680 PF01521 Iron-sulphur cluster biosynthesis CAI14_10690 PF01336 OB-fold nucleic acid binding domain CAI14_10690 PF00152 tRNA synthetases class II (D, K and N) CAI14_10710 PF04299 Putative FMN-binding domain CAI14_10730 PF00196 Bacterial regulatory proteins, luxR family CAI14_10730 PF00072 Response regulator receiver domain CAI14_10775 PF00484 Carbonic anhydrase CAI14_10780 PF06052 3-hydroxyanthranilic acid dioxygenase CAI14_10790 PF00266 Aminotransferase class-V CAI14_10795 PF01494 FAD binding domain CAI14_10805 PF00929 Exonuclease CAI14_10805 PF08411 Exonuclease C-terminal CAI14_10830 PF01513 ATP-NAD kinase CAI14_10835 PF10672 S-adenosylmethionine-dependent methyltransferase CAI14_10835 PF01170 Putative RNA methylase family UPF0020 CAI14_10835 PF02926 THUMP domain CAI14_10875 PF00581 Rhodanese-like domain CAI14_10880 PF00293 NUDIX domain CAI14_10885 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CAI14_10885 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CAI14_10890 PF00378 Enoyl-CoA hydratase/isomerase CAI14_10900 PF00633 Helix-hairpin-helix motif CAI14_10900 PF00730 HhH-GPD superfamily base excision DNA repair protein CAI14_10900 PF10576 Iron-sulfur binding domain of endonuclease III CAI14_10905 PF00916 Sulfate permease family CAI14_10905 PF01740 STAS domain CAI14_10925 PF12849 PBP superfamily domain CAI14_10930 PF12849 PBP superfamily domain CAI14_10935 PF00528 Binding-protein-dependent transport system inner membrane component CAI14_10940 PF00528 Binding-protein-dependent transport system inner membrane component CAI14_10945 PF00005 ABC transporter CAI14_10950 PF01895 PhoU domain CAI14_10960 PF00929 Exonuclease CAI14_10965 PF07694 5TMR of 5TMR-LYT CAI14_10965 PF00990 Diguanylate cyclase, GGDEF domain CAI14_10970 PF08032 RNA 2'-O ribose methyltransferase substrate binding CAI14_10970 PF00588 SpoU rRNA Methylase family CAI14_10980 PF17876 Cold shock domain CAI14_10980 PF08206 Ribonuclease B OB domain CAI14_10980 PF08461 Ribonuclease R winged-helix domain CAI14_10980 PF00575 S1 RNA binding domain CAI14_10980 PF00773 RNB domain CAI14_11000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CAI14_11000 PF02770 Acyl-CoA dehydrogenase, middle domain CAI14_11000 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CAI14_11005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CAI14_11005 PF02770 Acyl-CoA dehydrogenase, middle domain CAI14_11005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CAI14_11010 PF01209 ubiE/COQ5 methyltransferase family CAI14_11015 PF02574 Homocysteine S-methyltransferase CAI14_11015 PF00809 Pterin binding enzyme CAI14_11040 PF00294 pfkB family carbohydrate kinase CAI14_11045 PF07690 Major Facilitator Superfamily CAI14_11050 PF00356 Bacterial regulatory proteins, lacI family CAI14_11065 PF04102 SlyX CAI14_11070 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CAI14_11070 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CAI14_11070 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CAI14_11075 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CAI14_11075 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CAI14_11080 PF00255 Glutathione peroxidase CAI14_11090 PF00392 Bacterial regulatory proteins, gntR family CAI14_11095 PF00005 ABC transporter CAI14_11120 PF00206 Lyase CAI14_11120 PF10415 Fumarase C C-terminus CAI14_11125 PF00571 CBS domain CAI14_11125 PF03471 Transporter associated domain CAI14_11125 PF01595 Cyclin M transmembrane N-terminal domain CAI14_11135 PF08328 Adenylosuccinate lyase C-terminal CAI14_11135 PF00206 Lyase CAI14_11155 PF16870 2-oxoglutarate dehydrogenase C-terminal CAI14_11155 PF00676 Dehydrogenase E1 component CAI14_11155 PF16078 2-oxoglutarate dehydrogenase N-terminus CAI14_11155 PF02779 Transketolase, pyrimidine binding domain CAI14_11160 PF02817 e3 binding domain CAI14_11160 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CAI14_11160 PF00364 Biotin-requiring enzyme CAI14_11165 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CAI14_11165 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAI14_11170 PF03641 Possible lysine decarboxylase CAI14_11175 PF01205 Uncharacterized protein family UPF0029 CAI14_11180 PF00664 ABC transporter transmembrane region CAI14_11180 PF00005 ABC transporter CAI14_11185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAI14_11185 PF03466 LysR substrate binding domain CAI14_11190 PF00664 ABC transporter transmembrane region CAI14_11190 PF00005 ABC transporter CAI14_11190 PF03412 Peptidase C39 family CAI14_11215 PF08543 Phosphomethylpyrimidine kinase CAI14_11225 PF01556 DnaJ C terminal domain CAI14_11225 PF00684 DnaJ central domain CAI14_11225 PF00226 DnaJ domain CAI14_11230 PF00012 Hsp70 protein CAI14_11235 PF01025 GrpE CAI14_11240 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding CAI14_11240 PF01628 HrcA protein C terminal domain CAI14_11245 PF02463 RecF/RecN/SMC N terminal domain CAI14_11250 PF01475 Ferric uptake regulator family CAI14_11255 PF04355 SmpA / OmlA family CAI14_11260 PF03658 RnfH family Ubiquitin CAI14_11265 PF03364 Polyketide cyclase / dehydrase and lipid transport CAI14_11270 PF01668 SmpB protein CAI14_11275 PF00082 Subtilase family CAI14_11300 PF00990 Diguanylate cyclase, GGDEF domain CAI14_11310 PF00990 Diguanylate cyclase, GGDEF domain CAI14_11310 PF08448 PAS fold CAI14_11320 PF02321 Outer membrane efflux protein CAI14_11325 PF00106 short chain dehydrogenase CAI14_11330 PF00873 AcrB/AcrD/AcrF family CAI14_11335 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CAI14_11350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAI14_11350 PF03466 LysR substrate binding domain CAI14_11360 PF05736 OprF membrane domain CAI14_11360 PF00691 OmpA family CAI14_11370 PF00875 DNA photolyase CAI14_11370 PF03441 FAD binding domain of DNA photolyase CAI14_11375 PF03796 DnaB-like helicase C terminal domain CAI14_11375 PF00772 DnaB-like helicase N terminal domain CAI14_11380 PF03358 NADPH-dependent FMN reductase CAI14_11385 PF00733 Asparagine synthase CAI14_11385 PF13537 Glutamine amidotransferase domain CAI14_11395 PF00043 Glutathione S-transferase, C-terminal domain CAI14_11395 PF02798 Glutathione S-transferase, N-terminal domain CAI14_11405 PF02770 Acyl-CoA dehydrogenase, middle domain CAI14_11405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CAI14_11405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CAI14_11420 PF01026 TatD related DNase CAI14_11425 PF00899 ThiF family CAI14_11440 PF00313 'Cold-shock' DNA-binding domain CAI14_11450 PF02253 Phospholipase A1 CAI14_11455 PF00484 Carbonic anhydrase CAI14_11470 PF05683 Fumarase C-terminus CAI14_11470 PF05681 Fumarate hydratase (Fumerase) CAI14_11475 PF00005 ABC transporter CAI14_11480 PF00970 Oxidoreductase FAD-binding domain CAI14_11480 PF00175 Oxidoreductase NAD-binding domain CAI14_11485 PF00255 Glutathione peroxidase CAI14_11495 PF01432 Peptidase family M3 CAI14_11500 PF12802 MarR family CAI14_11525 PF00854 POT family CAI14_11540 PF00933 Glycosyl hydrolase family 3 N terminal domain CAI14_11540 PF14310 Fibronectin type III-like domain CAI14_11540 PF01915 Glycosyl hydrolase family 3 C-terminal domain CAI14_11550 PF07690 Major Facilitator Superfamily CAI14_11555 PF00529 HlyD membrane-fusion protein of T1SS CAI14_11555 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CAI14_11560 PF02321 Outer membrane efflux protein CAI14_11575 PF03989 DNA gyrase C-terminal domain, beta-propeller CAI14_11575 PF00521 DNA gyrase/topoisomerase IV, subunit A CAI14_11590 PF00210 Ferritin-like domain CAI14_11595 PF01804 Penicillin amidase CAI14_11600 PF07715 TonB-dependent Receptor Plug Domain CAI14_11600 PF00593 TonB dependent receptor CAI14_11610 PF13537 Glutamine amidotransferase domain CAI14_11610 PF00733 Asparagine synthase CAI14_11615 PF07687 Peptidase dimerisation domain CAI14_11615 PF01546 Peptidase family M20/M25/M40 CAI14_11620 PF03960 ArsC family CAI14_11625 PF00132 Bacterial transferase hexapeptide (six repeats) CAI14_11625 PF14602 Hexapeptide repeat of succinyl-transferase CAI14_11625 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CAI14_11630 PF01909 Nucleotidyltransferase domain CAI14_11630 PF01966 HD domain CAI14_11630 PF08335 GlnD PII-uridylyltransferase CAI14_11635 PF00557 Metallopeptidase family M24 CAI14_11670 PF00318 Ribosomal protein S2 CAI14_11675 PF00889 Elongation factor TS CAI14_11680 PF00072 Response regulator receiver domain CAI14_11680 PF00990 Diguanylate cyclase, GGDEF domain CAI14_11685 PF00696 Amino acid kinase family CAI14_11690 PF01765 Ribosome recycling factor CAI14_11695 PF01255 Putative undecaprenyl diphosphate synthase CAI14_11705 PF13288 DXP reductoisomerase C-terminal domain CAI14_11705 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CAI14_11705 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CAI14_11710 PF02163 Peptidase family M50 CAI14_11710 PF17820 PDZ domain CAI14_11715 PF07244 Surface antigen variable number repeat CAI14_11715 PF01103 Surface antigen CAI14_11725 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CAI14_11725 PF00132 Bacterial transferase hexapeptide (six repeats) CAI14_11730 PF07977 FabA-like domain CAI14_11735 PF00132 Bacterial transferase hexapeptide (six repeats) CAI14_11735 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CAI14_11740 PF02684 Lipid-A-disaccharide synthetase CAI14_11745 PF01351 Ribonuclease HII CAI14_11750 PF07733 Bacterial DNA polymerase III alpha NTPase domain CAI14_11750 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CAI14_11750 PF14579 Helix-hairpin-helix motif CAI14_11750 PF02811 PHP domain CAI14_11750 PF01336 OB-fold nucleic acid binding domain CAI14_11755 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CAI14_11790 PF03551 Transcriptional regulator PadR-like family CAI14_11810 PF02592 Putative vitamin uptake transporter CAI14_11820 PF02574 Homocysteine S-methyltransferase CAI14_11825 PF00324 Amino acid permease CAI14_11830 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CAI14_11835 PF13732 Domain of unknown function (DUF4162) CAI14_11835 PF00005 ABC transporter CAI14_11850 PF01588 Putative tRNA binding domain CAI14_11850 PF09334 tRNA synthetases class I (M) CAI14_11860 PF04060 Putative Fe-S cluster CAI14_11880 PF04542 Sigma-70 region 2 CAI14_11880 PF04545 Sigma-70, region 4 CAI14_11925 PF01042 Endoribonuclease L-PSP CAI14_11935 PF03706 Lysylphosphatidylglycerol synthase TM region CAI14_11935 PF09924 Uncharacterised conserved protein (DUF2156) CAI14_11965 PF07690 Major Facilitator Superfamily CAI14_11980 PF03831 PhnA domain CAI14_11980 PF08274 PhnA Zinc-Ribbon CAI14_11990 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CAI14_12010 PF01258 Prokaryotic dksA/traR C4-type zinc finger CAI14_12020 PF07043 Protein of unknown function (DUF1328) CAI14_12025 PF01863 Protein of unknown function DUF45 CAI14_12040 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CAI14_12040 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CAI14_12050 PF00108 Thiolase, N-terminal domain CAI14_12050 PF02803 Thiolase, C-terminal domain CAI14_12080 PF04679 ATP dependent DNA ligase C terminal region CAI14_12080 PF01068 ATP dependent DNA ligase domain CAI14_12080 PF04675 DNA ligase N terminus CAI14_12090 PF04679 ATP dependent DNA ligase C terminal region CAI14_12090 PF04675 DNA ligase N terminus CAI14_12090 PF01068 ATP dependent DNA ligase domain CAI14_12095 PF00271 Helicase conserved C-terminal domain CAI14_12095 PF08494 DEAD/H associated CAI14_12095 PF00270 DEAD/DEAH box helicase CAI14_12110 PF00313 'Cold-shock' DNA-binding domain CAI14_12120 PF01048 Phosphorylase superfamily CAI14_12130 PF00933 Glycosyl hydrolase family 3 N terminal domain CAI14_12135 PF04244 Deoxyribodipyrimidine photo-lyase-related protein CAI14_12140 PF01593 Flavin containing amine oxidoreductase CAI14_12145 PF01323 DSBA-like thioredoxin domain CAI14_12150 PF01928 CYTH domain CAI14_12160 PF05958 tRNA (Uracil-5-)-methyltransferase CAI14_12170 PF11967 Recombination protein O N terminal CAI14_12170 PF02565 Recombination protein O C terminal CAI14_12175 PF01926 50S ribosome-binding GTPase CAI14_12175 PF07650 KH domain CAI14_12180 PF14622 Ribonuclease-III-like CAI14_12180 PF00035 Double-stranded RNA binding motif CAI14_12190 PF10502 Signal peptidase, peptidase S26 CAI14_12195 PF00679 Elongation factor G C-terminus CAI14_12195 PF06421 GTP-binding protein LepA C-terminus CAI14_12195 PF03144 Elongation factor Tu domain 2 CAI14_12195 PF00009 Elongation factor Tu GTP binding domain CAI14_12200 PF13180 PDZ domain CAI14_12210 PF08281 Sigma-70, region 4 CAI14_12210 PF04542 Sigma-70 region 2 CAI14_12215 PF00378 Enoyl-CoA hydratase/isomerase CAI14_12215 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CAI14_12215 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CAI14_12220 PF01545 Cation efflux family CAI14_12230 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CAI14_12230 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CAI14_12230 PF00378 Enoyl-CoA hydratase/isomerase CAI14_12235 PF00378 Enoyl-CoA hydratase/isomerase CAI14_12240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CAI14_12240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CAI14_12240 PF02770 Acyl-CoA dehydrogenase, middle domain CAI14_12245 PF00171 Aldehyde dehydrogenase family CAI14_12250 PF06114 IrrE N-terminal-like domain CAI14_12250 PF09856 Predicted transcriptional regulator (DUF2083) CAI14_12250 PF01381 Helix-turn-helix CAI14_12260 PF07745 Glycosyl hydrolase family 53 CAI14_12265 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CAI14_12265 PF00703 Glycosyl hydrolases family 2 CAI14_12265 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 CAI14_12265 PF16355 Domain of unknown function (DUF4982) CAI14_12265 PF02837 Glycosyl hydrolases family 2, sugar binding domain CAI14_12285 PF13683 Integrase core domain CAI14_12285 PF13276 HTH-like domain CAI14_12310 PF03527 RHS protein CAI14_12310 PF05593 RHS Repeat CAI14_12315 PF05593 RHS Repeat CAI14_12315 PF03527 RHS protein CAI14_12350 PF01526 Tn3 transposase DDE domain CAI14_12350 PF13700 Domain of unknown function (DUF4158) CAI14_12370 PF05649 Peptidase family M13 CAI14_12370 PF01431 Peptidase family M13 CAI14_12380 PF01431 Peptidase family M13 CAI14_12380 PF05649 Peptidase family M13 CAI14_12395 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CAI14_12405 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CAI14_12405 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAI14_12410 PF01266 FAD dependent oxidoreductase CAI14_12415 PF04235 Protein of unknown function (DUF418) CAI14_12420 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CAI14_12425 PF00877 NlpC/P60 family CAI14_12430 PF00877 NlpC/P60 family CAI14_12445 PF00375 Sodium:dicarboxylate symporter family CAI14_12450 PF00245 Alkaline phosphatase CAI14_12460 PF01171 PP-loop family CAI14_12460 PF09179 TilS substrate binding domain CAI14_12460 PF11734 TilS substrate C-terminal domain CAI14_12465 PF02609 Exonuclease VII small subunit CAI14_12470 PF00348 Polyprenyl synthetase CAI14_12515 PF01523 Putative modulator of DNA gyrase CAI14_12520 PF04751 Protein of unknown function (DUF615) CAI14_12525 PF01523 Putative modulator of DNA gyrase CAI14_12535 PF13502 AsmA-like C-terminal region CAI14_12535 PF13116 Protein of unknown function CAI14_12540 PF00575 S1 RNA binding domain CAI14_12540 PF10150 Ribonuclease E/G family CAI14_12545 PF02545 Maf-like protein CAI14_12550 PF04402 Protein of unknown function (DUF541) CAI14_12570 PF02590 Predicted SPOUT methyltransferase CAI14_12585 PF01467 Cytidylyltransferase-like CAI14_12600 PF08264 Anticodon-binding domain of tRNA CAI14_12600 PF13603 Leucyl-tRNA synthetase, Domain 2 CAI14_12600 PF00133 tRNA synthetases class I (I, L, M and V) CAI14_12610 PF00085 Thioredoxin CAI14_12650 PF04070 Domain of unknown function (DUF378) CAI14_12655 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CAI14_12695 PF00664 ABC transporter transmembrane region CAI14_12695 PF00005 ABC transporter CAI14_12710 PF00873 AcrB/AcrD/AcrF family CAI14_12725 PF02321 Outer membrane efflux protein CAI14_12730 PF00486 Transcriptional regulatory protein, C terminal CAI14_12730 PF00072 Response regulator receiver domain CAI14_12735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_12735 PF00672 HAMP domain CAI14_12735 PF00512 His Kinase A (phospho-acceptor) domain CAI14_12740 PF00999 Sodium/hydrogen exchanger family CAI14_12745 PF00144 Beta-lactamase CAI14_12750 PF03737 Aldolase/RraA CAI14_12770 PF00072 Response regulator receiver domain CAI14_12770 PF00990 Diguanylate cyclase, GGDEF domain CAI14_12775 PF00849 RNA pseudouridylate synthase CAI14_12775 PF01479 S4 domain CAI14_12780 PF00563 EAL domain CAI14_12780 PF08448 PAS fold CAI14_12780 PF00990 Diguanylate cyclase, GGDEF domain CAI14_12785 PF00270 DEAD/DEAH box helicase CAI14_12785 PF00271 Helicase conserved C-terminal domain CAI14_12785 PF03880 DbpA RNA binding domain CAI14_12830 PF00730 HhH-GPD superfamily base excision DNA repair protein CAI14_12830 PF06029 AlkA N-terminal domain CAI14_12835 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CAI14_12835 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CAI14_12845 PF00654 Voltage gated chloride channel CAI14_12870 PF07715 TonB-dependent Receptor Plug Domain CAI14_12870 PF00593 TonB dependent receptor CAI14_12880 PF01483 Proprotein convertase P-domain CAI14_12880 PF00082 Subtilase family CAI14_12890 PF01483 Proprotein convertase P-domain CAI14_12890 PF00082 Subtilase family CAI14_12915 PF07690 Major Facilitator Superfamily CAI14_12945 PF02321 Outer membrane efflux protein CAI14_12950 PF00873 AcrB/AcrD/AcrF family CAI14_12955 PF00529 HlyD membrane-fusion protein of T1SS CAI14_12955 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CAI14_12965 PF01475 Ferric uptake regulator family CAI14_12970 PF00749 tRNA synthetases class I (E and Q), catalytic domain CAI14_12995 PF06123 Inner membrane protein CreD CAI14_13005 PF01790 Prolipoprotein diacylglyceryl transferase CAI14_13020 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CAI14_13030 PF17757 UvrB interaction domain CAI14_13030 PF03461 TRCF domain CAI14_13030 PF00271 Helicase conserved C-terminal domain CAI14_13030 PF00270 DEAD/DEAH box helicase CAI14_13030 PF02559 CarD-like/TRCF domain CAI14_13045 PF09078 CheY binding CAI14_13045 PF01627 Hpt domain CAI14_13045 PF01584 CheW-like domain CAI14_13045 PF02895 Signal transducing histidine kinase, homodimeric domain CAI14_13045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_13050 PF00672 HAMP domain CAI14_13050 PF02203 Tar ligand binding domain homologue CAI14_13050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAI14_13055 PF01584 CheW-like domain CAI14_13060 PF13426 PAS domain CAI14_13060 PF00990 Diguanylate cyclase, GGDEF domain CAI14_13060 PF00563 EAL domain CAI14_13065 PF03705 CheR methyltransferase, all-alpha domain CAI14_13065 PF01739 CheR methyltransferase, SAM binding domain CAI14_13070 PF01339 CheB methylesterase CAI14_13070 PF00072 Response regulator receiver domain CAI14_13075 PF13091 PLD-like domain CAI14_13090 PF01219 Prokaryotic diacylglycerol kinase CAI14_13115 PF00072 Response regulator receiver domain CAI14_13115 PF00486 Transcriptional regulatory protein, C terminal CAI14_13120 PF13472 GDSL-like Lipase/Acylhydrolase family CAI14_13125 PF00005 ABC transporter CAI14_13135 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CAI14_13145 PF00005 ABC transporter CAI14_13150 PF00528 Binding-protein-dependent transport system inner membrane component CAI14_13170 PF00593 TonB dependent receptor CAI14_13170 PF07715 TonB-dependent Receptor Plug Domain CAI14_13180 PF00248 Aldo/keto reductase family CAI14_13190 PF01773 Na+ dependent nucleoside transporter N-terminus CAI14_13190 PF07670 Nucleoside recognition CAI14_13190 PF07662 Na+ dependent nucleoside transporter C-terminus CAI14_13195 PF00294 pfkB family carbohydrate kinase CAI14_13205 PF01207 Dihydrouridine synthase (Dus) CAI14_13210 PF13649 Methyltransferase domain CAI14_13220 PF00438 S-adenosylmethionine synthetase, N-terminal domain CAI14_13220 PF02772 S-adenosylmethionine synthetase, central domain CAI14_13220 PF02773 S-adenosylmethionine synthetase, C-terminal domain CAI14_13225 PF00328 Histidine phosphatase superfamily (branch 2) CAI14_13270 PF00311 Phosphoenolpyruvate carboxylase CAI14_13280 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CAI14_13280 PF05221 S-adenosyl-L-homocysteine hydrolase CAI14_13285 PF13649 Methyltransferase domain CAI14_13295 PF00685 Sulfotransferase domain CAI14_13320 PF00128 Alpha amylase, catalytic domain CAI14_13325 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CAI14_13345 PF09286 Pro-kumamolisin, activation domain CAI14_13345 PF00082 Subtilase family CAI14_13350 PF00107 Zinc-binding dehydrogenase CAI14_13350 PF16197 Ketoacyl-synthetase C-terminal extension CAI14_13350 PF00550 Phosphopantetheine attachment site CAI14_13350 PF14765 Polyketide synthase dehydratase CAI14_13350 PF00698 Acyl transferase domain CAI14_13350 PF08659 KR domain CAI14_13350 PF02801 Beta-ketoacyl synthase, C-terminal domain CAI14_13350 PF08240 Alcohol dehydrogenase GroES-like domain CAI14_13350 PF00109 Beta-ketoacyl synthase, N-terminal domain CAI14_13365 PF02219 Methylenetetrahydrofolate reductase CAI14_13375 PF00293 NUDIX domain CAI14_13380 PF02810 SEC-C motif CAI14_13380 PF07517 SecA DEAD-like domain CAI14_13380 PF01043 SecA preprotein cross-linking domain CAI14_13380 PF07516 SecA Wing and Scaffold domain CAI14_13395 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CAI14_13400 PF00091 Tubulin/FtsZ family, GTPase domain CAI14_13400 PF12327 FtsZ family, C-terminal domain CAI14_13405 PF02491 SHS2 domain inserted in FTSA CAI14_13410 PF08478 POTRA domain, FtsQ-type CAI14_13410 PF03799 Cell division protein FtsQ CAI14_13415 PF01820 D-ala D-ala ligase N-terminus CAI14_13415 PF07478 D-ala D-ala ligase C-terminus CAI14_13420 PF01225 Mur ligase family, catalytic domain CAI14_13420 PF02875 Mur ligase family, glutamate ligase domain CAI14_13420 PF08245 Mur ligase middle domain CAI14_13425 PF03033 Glycosyltransferase family 28 N-terminal domain CAI14_13425 PF04101 Glycosyltransferase family 28 C-terminal domain CAI14_13430 PF01098 Cell cycle protein CAI14_13435 PF00953 Glycosyl transferase family 4 CAI14_13440 PF02875 Mur ligase family, glutamate ligase domain CAI14_13440 PF08245 Mur ligase middle domain CAI14_13440 PF01225 Mur ligase family, catalytic domain CAI14_13445 PF08245 Mur ligase middle domain CAI14_13445 PF01225 Mur ligase family, catalytic domain CAI14_13445 PF02875 Mur ligase family, glutamate ligase domain CAI14_13450 PF03717 Penicillin-binding Protein dimerisation domain CAI14_13450 PF00905 Penicillin binding protein transpeptidase domain CAI14_13455 PF04999 Cell division protein FtsL CAI14_13460 PF01795 MraW methylase family CAI14_13465 PF02381 MraZ protein, putative antitoxin-like CAI14_13490 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CAI14_13500 PF02021 Uncharacterised protein family UPF0102 CAI14_13505 PF04307 LexA-binding, inner membrane-associated putative hydrolase CAI14_13510 PF02913 FAD linked oxidases, C-terminal domain CAI14_13510 PF01565 FAD binding domain CAI14_13540 PF00486 Transcriptional regulatory protein, C terminal CAI14_13540 PF00072 Response regulator receiver domain CAI14_13545 PF13492 GAF domain CAI14_13545 PF02702 Osmosensitive K+ channel His kinase sensor domain CAI14_13545 PF00512 His Kinase A (phospho-acceptor) domain CAI14_13545 PF13493 Domain of unknown function (DUF4118) CAI14_13545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_13550 PF02669 K+-transporting ATPase, c chain CAI14_13560 PF03814 Potassium-transporting ATPase A subunit CAI14_13585 PF02769 AIR synthase related protein, C-terminal domain CAI14_13585 PF00586 AIR synthase related protein, N-terminal domain CAI14_13590 PF01029 NusB family CAI14_13595 PF00885 6,7-dimethyl-8-ribityllumazine synthase CAI14_13600 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CAI14_13600 PF00925 GTP cyclohydrolase II CAI14_13605 PF00677 Lumazine binding domain CAI14_13615 PF01872 RibD C-terminal domain CAI14_13615 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CAI14_13625 PF03477 ATP cone domain CAI14_13630 PF00464 Serine hydroxymethyltransferase CAI14_13640 PF00005 ABC transporter CAI14_13640 PF12848 ABC transporter CAI14_13650 PF00892 EamA-like transporter family CAI14_13655 PF02567 Phenazine biosynthesis-like protein CAI14_13660 PF00155 Aminotransferase class I and II CAI14_13660 PF00392 Bacterial regulatory proteins, gntR family CAI14_13670 PF00756 Putative esterase CAI14_13675 PF04828 Glutathione-dependent formaldehyde-activating enzyme CAI14_13680 PF08240 Alcohol dehydrogenase GroES-like domain CAI14_13680 PF00107 Zinc-binding dehydrogenase CAI14_13685 PF02583 Metal-sensitive transcriptional repressor CAI14_13700 PF00486 Transcriptional regulatory protein, C terminal CAI14_13700 PF00072 Response regulator receiver domain CAI14_13705 PF00512 His Kinase A (phospho-acceptor) domain CAI14_13705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_13705 PF00672 HAMP domain CAI14_13710 PF04107 Glutamate-cysteine ligase family 2(GCS2) CAI14_13725 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CAI14_13725 PF00753 Metallo-beta-lactamase superfamily CAI14_13725 PF10996 Beta-Casp domain CAI14_13730 PF01926 50S ribosome-binding GTPase CAI14_13735 PF00034 Cytochrome c CAI14_13760 PF02028 BCCT, betaine/carnitine/choline family transporter CAI14_13765 PF00171 Aldehyde dehydrogenase family CAI14_13770 PF00732 GMC oxidoreductase CAI14_13770 PF05199 GMC oxidoreductase CAI14_13775 PF12627 Probable RNA and SrmB- binding site of polymerase A CAI14_13775 PF01966 HD domain CAI14_13775 PF01743 Poly A polymerase head domain CAI14_13785 PF01979 Amidohydrolase family CAI14_13790 PF01380 SIS domain CAI14_13795 PF00356 Bacterial regulatory proteins, lacI family CAI14_13800 PF07690 Major Facilitator Superfamily CAI14_13805 PF07702 UTRA domain CAI14_13805 PF00392 Bacterial regulatory proteins, gntR family CAI14_13820 PF02837 Glycosyl hydrolases family 2, sugar binding domain CAI14_13820 PF00703 Glycosyl hydrolases family 2 CAI14_13820 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 CAI14_13820 PF16355 Domain of unknown function (DUF4982) CAI14_13820 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CAI14_13845 PF03934 Type II secretion system (T2SS), protein K CAI14_13850 PF11612 Type II secretion system (T2SS), protein J CAI14_13850 PF07963 Prokaryotic N-terminal methylation motif CAI14_13855 PF07963 Prokaryotic N-terminal methylation motif CAI14_13855 PF02501 Type II secretion system (T2SS), protein I CAI14_13860 PF12019 Type II transport protein GspH CAI14_13860 PF07963 Prokaryotic N-terminal methylation motif CAI14_13865 PF07963 Prokaryotic N-terminal methylation motif CAI14_13865 PF08334 Type II secretion system (T2SS), protein G CAI14_13870 PF00482 Type II secretion system (T2SS), protein F CAI14_13875 PF00437 Type II/IV secretion system protein CAI14_13880 PF03958 Bacterial type II/III secretion system short domain CAI14_13880 PF00263 Bacterial type II and III secretion system protein CAI14_13925 PF00106 short chain dehydrogenase CAI14_13930 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CAI14_13935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_13935 PF00512 His Kinase A (phospho-acceptor) domain CAI14_13940 PF00072 Response regulator receiver domain CAI14_13945 PF00512 His Kinase A (phospho-acceptor) domain CAI14_13945 PF08446 PAS fold CAI14_13945 PF00360 Phytochrome region CAI14_13945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_13945 PF01590 GAF domain CAI14_13950 PF04972 BON domain CAI14_13955 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CAI14_13955 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CAI14_13960 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CAI14_13960 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CAI14_13995 PF00293 NUDIX domain CAI14_13995 PF01467 Cytidylyltransferase-like CAI14_14005 PF03466 LysR substrate binding domain CAI14_14005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAI14_14015 PF00595 PDZ domain CAI14_14015 PF11818 C-terminal domain of tail specific protease (DUF3340) CAI14_14015 PF17804 Tail specific protease N-terminal domain CAI14_14015 PF03572 Peptidase family S41 CAI14_14020 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CAI14_14020 PF04055 Radical SAM superfamily CAI14_14025 PF03099 Biotin/lipoate A/B protein ligase family CAI14_14030 PF04359 Protein of unknown function (DUF493) CAI14_14040 PF07943 Penicillin-binding protein 5, C-terminal domain CAI14_14040 PF00768 D-alanyl-D-alanine carboxypeptidase CAI14_14050 PF03330 Lytic transglycolase CAI14_14050 PF05036 Sporulation related domain CAI14_14055 PF13406 Transglycosylase SLT domain CAI14_14060 PF00295 Glycosyl hydrolases family 28 CAI14_14065 PF01098 Cell cycle protein CAI14_14070 PF03717 Penicillin-binding Protein dimerisation domain CAI14_14070 PF00905 Penicillin binding protein transpeptidase domain CAI14_14080 PF04085 rod shape-determining protein MreC CAI14_14090 PF00294 pfkB family carbohydrate kinase CAI14_14095 PF02954 Bacterial regulatory protein, Fis family CAI14_14095 PF00158 Sigma-54 interaction domain CAI14_14095 PF01590 GAF domain CAI14_14105 PF00107 Zinc-binding dehydrogenase CAI14_14105 PF08240 Alcohol dehydrogenase GroES-like domain CAI14_14115 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CAI14_14115 PF00034 Cytochrome c CAI14_14115 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CAI14_14210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_14210 PF00989 PAS fold CAI14_14210 PF16736 Single Cache-like CAI14_14210 PF00512 His Kinase A (phospho-acceptor) domain CAI14_14215 PF00486 Transcriptional regulatory protein, C terminal CAI14_14215 PF00072 Response regulator receiver domain CAI14_14225 PF18030 RimK PreATP-grasp domain CAI14_14225 PF08443 RimK-like ATP-grasp domain CAI14_14230 PF00128 Alpha amylase, catalytic domain CAI14_14230 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CAI14_14260 PF03797 Autotransporter beta-domain CAI14_14260 PF00657 GDSL-like Lipase/Acylhydrolase CAI14_14270 PF05690 Thiazole biosynthesis protein ThiG CAI14_14280 PF02390 Putative methyltransferase CAI14_14285 PF03600 Citrate transporter CAI14_14285 PF02080 TrkA-C domain CAI14_14305 PF01557 Fumarylacetoacetate (FAA) hydrolase family CAI14_14310 PF01741 Large-conductance mechanosensitive channel, MscL CAI14_14320 PF00356 Bacterial regulatory proteins, lacI family CAI14_14330 PF00703 Glycosyl hydrolases family 2 CAI14_14330 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain CAI14_14330 PF02837 Glycosyl hydrolases family 2, sugar binding domain CAI14_14335 PF10566 Glycoside hydrolase 97 CAI14_14335 PF14508 Glycosyl-hydrolase 97 N-terminal CAI14_14335 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation CAI14_14345 PF00135 Carboxylesterase family CAI14_14350 PF00588 SpoU rRNA Methylase family CAI14_14350 PF08032 RNA 2'-O ribose methyltransferase substrate binding CAI14_14400 PF00873 AcrB/AcrD/AcrF family CAI14_14405 PF00529 HlyD membrane-fusion protein of T1SS CAI14_14405 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CAI14_14410 PF00009 Elongation factor Tu GTP binding domain CAI14_14415 PF01507 Phosphoadenosine phosphosulfate reductase family CAI14_14420 PF00667 FAD binding domain CAI14_14420 PF00258 Flavodoxin CAI14_14420 PF00175 Oxidoreductase NAD-binding domain CAI14_14425 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CAI14_14425 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CAI14_14430 PF01507 Phosphoadenosine phosphosulfate reductase family CAI14_14450 PF00512 His Kinase A (phospho-acceptor) domain CAI14_14450 PF01627 Hpt domain CAI14_14450 PF00072 Response regulator receiver domain CAI14_14450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_14465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAI14_14465 PF03466 LysR substrate binding domain CAI14_14470 PF10414 Sirohaem synthase dimerisation region CAI14_14470 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CAI14_14470 PF14824 Sirohaem biosynthesis protein central CAI14_14475 PF00291 Pyridoxal-phosphate dependent enzyme CAI14_14485 PF01661 Macro domain CAI14_14490 PF00274 Fructose-bisphosphate aldolase class-I CAI14_14495 PF02887 Pyruvate kinase, alpha/beta domain CAI14_14495 PF00224 Pyruvate kinase, barrel domain CAI14_14505 PF00162 Phosphoglycerate kinase CAI14_14530 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CAI14_14530 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CAI14_14545 PF03922 OmpW family CAI14_14550 PF03922 OmpW family CAI14_14560 PF04273 Putative phosphatase (DUF442) CAI14_14560 PF00753 Metallo-beta-lactamase superfamily CAI14_14570 PF00528 Binding-protein-dependent transport system inner membrane component CAI14_14575 PF03459 TOBE domain CAI14_14575 PF00005 ABC transporter CAI14_14610 PF01476 LysM domain CAI14_14610 PF03734 L,D-transpeptidase catalytic domain CAI14_14620 PF04225 Opacity-associated protein A LysM-like domain CAI14_14620 PF01551 Peptidase family M23 CAI14_14630 PF07715 TonB-dependent Receptor Plug Domain CAI14_14630 PF00593 TonB dependent receptor CAI14_14635 PF12146 Serine aminopeptidase, S33 CAI14_14640 PF00456 Transketolase, thiamine diphosphate binding domain CAI14_14640 PF02780 Transketolase, C-terminal domain CAI14_14640 PF02779 Transketolase, pyrimidine binding domain CAI14_14645 PF00375 Sodium:dicarboxylate symporter family CAI14_14660 PF07584 Aerotolerance regulator N-terminal CAI14_14660 PF00092 von Willebrand factor type A domain CAI14_14680 PF07726 ATPase family associated with various cellular activities (AAA) CAI14_14680 PF17863 AAA lid domain CAI14_14710 PF00905 Penicillin binding protein transpeptidase domain CAI14_14710 PF17092 Penicillin-binding protein OB-like domain CAI14_14710 PF00912 Transglycosylase CAI14_14725 PF00285 Citrate synthase, C-terminal domain CAI14_14730 PF01197 Ribosomal protein L31 CAI14_14735 PF01156 Inosine-uridine preferring nucleoside hydrolase CAI14_14740 PF00271 Helicase conserved C-terminal domain CAI14_14740 PF00270 DEAD/DEAH box helicase CAI14_14740 PF17191 RecG wedge domain CAI14_14745 PF01042 Endoribonuclease L-PSP CAI14_14750 PF02824 TGS domain CAI14_14750 PF04607 Region found in RelA / SpoT proteins CAI14_14750 PF13291 ACT domain CAI14_14755 PF13419 Haloacid dehalogenase-like hydrolase CAI14_14760 PF04198 Putative sugar-binding domain CAI14_14775 PF04966 Carbohydrate-selective porin, OprB family CAI14_14780 PF00528 Binding-protein-dependent transport system inner membrane component CAI14_14785 PF00528 Binding-protein-dependent transport system inner membrane component CAI14_14790 PF00005 ABC transporter CAI14_14790 PF08402 TOBE domain CAI14_14800 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CAI14_14800 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CAI14_14805 PF01192 RNA polymerase Rpb6 CAI14_14810 PF00625 Guanylate kinase CAI14_14815 PF03755 YicC-like family, N-terminal region CAI14_14815 PF08340 Domain of unknown function (DUF1732) CAI14_14820 PF01138 3' exoribonuclease family, domain 1 CAI14_14820 PF03725 3' exoribonuclease family, domain 2 CAI14_14830 PF01725 Ham1 family CAI14_14835 PF04055 Radical SAM superfamily CAI14_14835 PF06969 HemN C-terminal domain CAI14_14850 PF00557 Metallopeptidase family M24 CAI14_14860 PF00557 Metallopeptidase family M24 CAI14_14860 PF05195 Aminopeptidase P, N-terminal domain CAI14_14865 PF03695 Uncharacterised protein family (UPF0149) CAI14_14875 PF05164 Cell division protein ZapA CAI14_14885 PF01812 5-formyltetrahydrofolate cyclo-ligase family CAI14_14895 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CAI14_14905 PF13369 Transglutaminase-like superfamily CAI14_14910 PF00301 Rubredoxin CAI14_14915 PF02581 Thiamine monophosphate synthase CAI14_14930 PF00202 Aminotransferase class-III CAI14_14935 PF00196 Bacterial regulatory proteins, luxR family CAI14_14935 PF17874 MalT-like TPR region CAI14_14940 PF00127 Copper binding proteins, plastocyanin/azurin family CAI14_14945 PF00155 Aminotransferase class I and II CAI14_14955 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CAI14_14955 PF00034 Cytochrome c CAI14_14960 PF01593 Flavin containing amine oxidoreductase CAI14_14975 PF00202 Aminotransferase class-III CAI14_14980 PF00027 Cyclic nucleotide-binding domain CAI14_14980 PF00520 Ion transport protein CAI14_15000 PF01569 PAP2 superfamily CAI14_15005 PF01062 Bestrophin, RFP-TM, chloride channel CAI14_15015 PF08245 Mur ligase middle domain CAI14_15015 PF01225 Mur ligase family, catalytic domain CAI14_15015 PF02875 Mur ligase family, glutamate ligase domain CAI14_15045 PF03030 Inorganic H+ pyrophosphatase CAI14_15055 PF00719 Inorganic pyrophosphatase CAI14_15080 PF12833 Helix-turn-helix domain CAI14_15085 PF18500 CadC C-terminal domain 1 CAI14_15085 PF00486 Transcriptional regulatory protein, C terminal CAI14_15090 PF01964 Radical SAM ThiC family CAI14_15090 PF13667 ThiC-associated domain CAI14_15100 PF00593 TonB dependent receptor CAI14_15100 PF07715 TonB-dependent Receptor Plug Domain CAI14_15105 PF00672 HAMP domain CAI14_15105 PF02203 Tar ligand binding domain homologue CAI14_15105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAI14_15115 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CAI14_15115 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CAI14_15120 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CAI14_15120 PF00205 Thiamine pyrophosphate enzyme, central domain CAI14_15120 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CAI14_15130 PF00291 Pyridoxal-phosphate dependent enzyme CAI14_15135 PF00682 HMGL-like CAI14_15135 PF08502 LeuA allosteric (dimerisation) domain CAI14_15140 PF00180 Isocitrate/isopropylmalate dehydrogenase CAI14_15145 PF00694 Aconitase C-terminal domain CAI14_15150 PF00330 Aconitase family (aconitate hydratase) CAI14_15155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAI14_15160 PF00990 Diguanylate cyclase, GGDEF domain CAI14_15160 PF17151 Periplasmic sensor domain CAI14_15175 PF02321 Outer membrane efflux protein CAI14_15180 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CAI14_15185 PF03279 Bacterial lipid A biosynthesis acyltransferase CAI14_15210 PF01515 Phosphate acetyl/butaryl transferase CAI14_15210 PF03949 Malic enzyme, NAD binding domain CAI14_15210 PF00390 Malic enzyme, N-terminal domain CAI14_15215 PF00375 Sodium:dicarboxylate symporter family CAI14_15225 PF02743 Cache domain CAI14_15225 PF00512 His Kinase A (phospho-acceptor) domain CAI14_15225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_15235 PF07690 Major Facilitator Superfamily CAI14_15245 PF03466 LysR substrate binding domain CAI14_15245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAI14_15255 PF00248 Aldo/keto reductase family CAI14_15275 PF00196 Bacterial regulatory proteins, luxR family CAI14_15275 PF00072 Response regulator receiver domain CAI14_15290 PF08521 Two-component sensor kinase N-terminal CAI14_15290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_15290 PF00512 His Kinase A (phospho-acceptor) domain CAI14_15295 PF00072 Response regulator receiver domain CAI14_15295 PF00486 Transcriptional regulatory protein, C terminal CAI14_15310 PF03600 Citrate transporter CAI14_15315 PF00106 short chain dehydrogenase CAI14_15320 PF00356 Bacterial regulatory proteins, lacI family CAI14_15335 PF00128 Alpha amylase, catalytic domain CAI14_15350 PF03193 RsgA GTPase CAI14_15385 PF01433 Peptidase family M1 domain CAI14_15385 PF11838 ERAP1-like C-terminal domain CAI14_15390 PF00990 Diguanylate cyclase, GGDEF domain CAI14_15390 PF17156 Gammaproteobacterial periplasmic sensor domain CAI14_15395 PF01209 ubiE/COQ5 methyltransferase family CAI14_15405 PF13533 Biotin-lipoyl like CAI14_15410 PF13673 Acetyltransferase (GNAT) domain CAI14_15420 PF07724 AAA domain (Cdc48 subfamily) CAI14_15420 PF10431 C-terminal, D2-small domain, of ClpB protein CAI14_15420 PF00004 ATPase family associated with various cellular activities (AAA) CAI14_15425 PF00227 Proteasome subunit CAI14_15430 PF00589 Phage integrase family CAI14_15430 PF02899 Phage integrase, N-terminal SAM-like domain CAI14_15440 PF01678 Diaminopimelate epimerase CAI14_15450 PF04304 Protein of unknown function (DUF454) CAI14_15455 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CAI14_15455 PF00326 Prolyl oligopeptidase family CAI14_15460 PF00155 Aminotransferase class I and II CAI14_15470 PF00326 Prolyl oligopeptidase family CAI14_15470 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CAI14_15510 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CAI14_15510 PF03900 Porphobilinogen deaminase, C-terminal domain CAI14_15515 PF04397 LytTr DNA-binding domain CAI14_15515 PF00072 Response regulator receiver domain CAI14_15520 PF06580 Histidine kinase CAI14_15520 PF07694 5TMR of 5TMR-LYT CAI14_15530 PF13632 Glycosyl transferase family group 2 CAI14_15550 PF08448 PAS fold CAI14_15550 PF00990 Diguanylate cyclase, GGDEF domain CAI14_15560 PF00916 Sulfate permease family CAI14_15560 PF01740 STAS domain CAI14_15565 PF00553 Cellulose binding domain CAI14_15565 PF00150 Cellulase (glycosyl hydrolase family 5) CAI14_15570 PF00672 HAMP domain CAI14_15570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAI14_15570 PF02203 Tar ligand binding domain homologue CAI14_15580 PF08448 PAS fold CAI14_15580 PF08447 PAS fold CAI14_15580 PF00563 EAL domain CAI14_15580 PF00990 Diguanylate cyclase, GGDEF domain CAI14_15630 PF01204 Trehalase CAI14_15640 PF01544 CorA-like Mg2+ transporter protein CAI14_15650 PF00324 Amino acid permease CAI14_15660 PF00497 Bacterial extracellular solute-binding proteins, family 3 CAI14_15665 PF00892 EamA-like transporter family CAI14_15690 PF00990 Diguanylate cyclase, GGDEF domain CAI14_15690 PF05230 MASE2 domain CAI14_15700 PF07759 Protein of unknown function (DUF1615) CAI14_15710 PF00326 Prolyl oligopeptidase family CAI14_15710 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CAI14_15720 PF03176 MMPL family CAI14_15720 PF12823 Domain of unknown function (DUF3817) CAI14_15745 PF13409 Glutathione S-transferase, N-terminal domain CAI14_15760 PF00106 short chain dehydrogenase CAI14_15775 PF00106 short chain dehydrogenase CAI14_15810 PF17831 Pyruvate dehydrogenase E1 component middle domain CAI14_15810 PF00456 Transketolase, thiamine diphosphate binding domain CAI14_15815 PF07745 Glycosyl hydrolase family 53 CAI14_15845 PF13419 Haloacid dehalogenase-like hydrolase CAI14_15850 PF07729 FCD domain CAI14_15850 PF00392 Bacterial regulatory proteins, gntR family CAI14_15870 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG CAI14_15880 PF01039 Carboxyl transferase domain CAI14_15885 PF06857 Malonate decarboxylase delta subunit (MdcD) CAI14_15890 PF16957 Malonate decarboxylase, alpha subunit, transporter CAI14_15915 PF04264 YceI-like domain CAI14_15920 PF00881 Nitroreductase family CAI14_15940 PF02592 Putative vitamin uptake transporter CAI14_15945 PF08335 GlnD PII-uridylyltransferase CAI14_15945 PF03710 Glutamate-ammonia ligase adenylyltransferase CAI14_15955 PF08450 SMP-30/Gluconolactonase/LRE-like region CAI14_15970 PF00793 DAHP synthetase I family CAI14_15975 PF00593 TonB dependent receptor CAI14_15975 PF07715 TonB-dependent Receptor Plug Domain CAI14_15985 PF00118 TCP-1/cpn60 chaperonin family CAI14_15990 PF00166 Chaperonin 10 Kd subunit CAI14_15995 PF04231 Endonuclease I CAI14_16005 PF00106 short chain dehydrogenase CAI14_16020 PF01852 START domain CAI14_16035 PF03091 CutA1 divalent ion tolerance protein CAI14_16040 PF11412 Disulphide bond corrector protein DsbC CAI14_16040 PF02683 Cytochrome C biogenesis protein transmembrane region CAI14_16045 PF01220 Dehydroquinase class II CAI14_16050 PF00364 Biotin-requiring enzyme CAI14_16060 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CAI14_16060 PF00289 Biotin carboxylase, N-terminal domain CAI14_16060 PF02785 Biotin carboxylase C-terminal domain CAI14_16090 PF01381 Helix-turn-helix CAI14_16105 PF02954 Bacterial regulatory protein, Fis family CAI14_16135 PF00782 Dual specificity phosphatase, catalytic domain CAI14_16140 PF12146 Serine aminopeptidase, S33 CAI14_16140 PF12147 Putative methyltransferase CAI14_16145 PF01066 CDP-alcohol phosphatidyltransferase CAI14_16150 PF01808 AICARFT/IMPCHase bienzyme CAI14_16150 PF02142 MGS-like domain CAI14_16160 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CAI14_16160 PF02844 Phosphoribosylglycinamide synthetase, N domain CAI14_16160 PF02843 Phosphoribosylglycinamide synthetase, C domain CAI14_16170 PF12805 FUSC-like inner membrane protein yccS CAI14_16175 PF07690 Major Facilitator Superfamily CAI14_16180 PF03466 LysR substrate binding domain CAI14_16180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAI14_16185 PF07690 Major Facilitator Superfamily CAI14_16205 PF03186 CobD/Cbib protein CAI14_16205 PF17113 Regulatory signalling modulator protein AmpE CAI14_16210 PF09297 NADH pyrophosphatase zinc ribbon domain CAI14_16210 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain CAI14_16210 PF00293 NUDIX domain CAI14_16225 PF01521 Iron-sulphur cluster biosynthesis CAI14_16245 PF00486 Transcriptional regulatory protein, C terminal CAI14_16245 PF00072 Response regulator receiver domain CAI14_16250 PF00672 HAMP domain CAI14_16250 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CAI14_16250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_16250 PF00072 Response regulator receiver domain CAI14_16250 PF00512 His Kinase A (phospho-acceptor) domain CAI14_16250 PF01627 Hpt domain CAI14_16255 PF00210 Ferritin-like domain CAI14_16265 PF00293 NUDIX domain CAI14_16280 PF00380 Ribosomal protein S9/S16 CAI14_16285 PF00572 Ribosomal protein L13 CAI14_16290 PF03232 Ubiquinone biosynthesis protein COQ7 CAI14_16295 PF00893 Small Multidrug Resistance protein CAI14_16300 PF02675 S-adenosylmethionine decarboxylase CAI14_16305 PF00325 Bacterial regulatory proteins, crp family CAI14_16305 PF00027 Cyclic nucleotide-binding domain CAI14_16315 PF00218 Indole-3-glycerol phosphate synthase CAI14_16320 PF00591 Glycosyl transferase family, a/b domain CAI14_16320 PF02885 Glycosyl transferase family, helical bundle domain CAI14_16330 PF00117 Glutamine amidotransferase class-I CAI14_16340 PF00425 chorismate binding enzyme CAI14_16340 PF04715 Anthranilate synthase component I, N terminal region CAI14_16345 PF00781 Diacylglycerol kinase catalytic domain CAI14_16350 PF00583 Acetyltransferase (GNAT) family CAI14_16355 PF00834 Ribulose-phosphate 3 epimerase family CAI14_16365 PF05099 Tellurite resistance protein TerB CAI14_16365 PF00226 DnaJ domain CAI14_16370 PF01259 SAICAR synthetase CAI14_16390 PF00182 Chitinase class I CAI14_16400 PF01447 Thermolysin metallopeptidase, catalytic domain CAI14_16400 PF02868 Thermolysin metallopeptidase, alpha-helical domain CAI14_16400 PF01483 Proprotein convertase P-domain CAI14_16400 PF07504 Fungalysin/Thermolysin Propeptide Motif CAI14_16415 PF13244 Domain of unknown function (DUF4040) CAI14_16415 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CAI14_16415 PF00361 Proton-conducting membrane transporter CAI14_16415 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CAI14_16420 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CAI14_16425 PF00361 Proton-conducting membrane transporter CAI14_16435 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CAI14_16440 PF03334 Na+/H+ antiporter subunit CAI14_16460 PF04209 homogentisate 1,2-dioxygenase CAI14_16470 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CAI14_16475 PF01047 MarR family CAI14_16485 PF00854 POT family CAI14_16490 PF03301 Tryptophan 2,3-dioxygenase CAI14_16505 PF00676 Dehydrogenase E1 component CAI14_16510 PF02779 Transketolase, pyrimidine binding domain CAI14_16510 PF02780 Transketolase, C-terminal domain CAI14_16520 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CAI14_16520 PF00364 Biotin-requiring enzyme CAI14_16520 PF02817 e3 binding domain CAI14_16525 PF00270 DEAD/DEAH box helicase CAI14_16525 PF00271 Helicase conserved C-terminal domain CAI14_16545 PF00873 AcrB/AcrD/AcrF family CAI14_16560 PF02321 Outer membrane efflux protein CAI14_16565 PF06903 VirK protein CAI14_16585 PF13460 NAD(P)H-binding CAI14_16590 PF00128 Alpha amylase, catalytic domain CAI14_16590 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CAI14_16600 PF00128 Alpha amylase, catalytic domain CAI14_16605 PF02446 4-alpha-glucanotransferase CAI14_16610 PF00128 Alpha amylase, catalytic domain CAI14_16610 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CAI14_16610 PF11941 Domain of unknown function (DUF3459) CAI14_16615 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CAI14_16615 PF00128 Alpha amylase, catalytic domain CAI14_16615 PF02806 Alpha amylase, C-terminal all-beta domain CAI14_16620 PF08323 Starch synthase catalytic domain CAI14_16620 PF00534 Glycosyl transferases group 1 CAI14_16625 PF00072 Response regulator receiver domain CAI14_16625 PF00990 Diguanylate cyclase, GGDEF domain CAI14_16630 PF05661 Protein of unknown function (DUF808) CAI14_16635 PF03109 ABC1 family CAI14_16645 PF00884 Sulfatase CAI14_16650 PF12794 Mechanosensitive ion channel inner membrane domain 1 CAI14_16650 PF12795 Mechanosensitive ion channel porin domain CAI14_16650 PF00924 Mechanosensitive ion channel CAI14_16665 PF01464 Transglycosylase SLT domain CAI14_16675 PF00263 Bacterial type II and III secretion system protein CAI14_16675 PF03958 Bacterial type II/III secretion system short domain CAI14_16680 PF01311 Bacterial export proteins, family 1 CAI14_16690 PF02874 ATP synthase alpha/beta family, beta-barrel domain CAI14_16690 PF18269 T3SS EscN ATPase C-terminal domain CAI14_16690 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CAI14_16705 PF01514 Secretory protein of YscJ/FliF family CAI14_16720 PF01312 FlhB HrpN YscU SpaS Family CAI14_16725 PF00771 FHIPEP family CAI14_16740 PF00813 FliP family CAI14_16745 PF01313 Bacterial export proteins, family 3 CAI14_16780 PF05819 NolX protein CAI14_16810 PF01040 UbiA prenyltransferase family CAI14_16820 PF04055 Radical SAM superfamily CAI14_16820 PF06968 Biotin and Thiamin Synthesis associated domain CAI14_16825 PF00155 Aminotransferase class I and II CAI14_16835 PF12697 Alpha/beta hydrolase family CAI14_16845 PF13649 Methyltransferase domain CAI14_16865 PF00291 Pyridoxal-phosphate dependent enzyme CAI14_16875 PF01134 Glucose inhibited division protein A CAI14_16875 PF13932 GidA associated domain CAI14_16880 PF10677 Protein of unknown function (DUF2490) CAI14_16885 PF07859 alpha/beta hydrolase fold CAI14_16895 PF09339 IclR helix-turn-helix domain CAI14_16895 PF01614 Bacterial transcriptional regulator CAI14_16905 PF02627 Carboxymuconolactone decarboxylase family CAI14_16910 PF12146 Serine aminopeptidase, S33 CAI14_16915 PF10397 Adenylosuccinate lyase C-terminus CAI14_16915 PF00206 Lyase CAI14_16925 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal CAI14_16925 PF00775 Dioxygenase CAI14_16930 PF02803 Thiolase, C-terminal domain CAI14_16930 PF00108 Thiolase, N-terminal domain CAI14_16935 PF01144 Coenzyme A transferase CAI14_16940 PF01144 Coenzyme A transferase CAI14_16945 PF00355 Rieske [2Fe-2S] domain CAI14_16950 PF00970 Oxidoreductase FAD-binding domain CAI14_16950 PF00111 2Fe-2S iron-sulfur cluster binding domain CAI14_16960 PF00455 DeoR C terminal sensor domain CAI14_16960 PF08220 DeoR-like helix-turn-helix domain CAI14_16965 PF01266 FAD dependent oxidoreductase CAI14_16965 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CAI14_16970 PF00230 Major intrinsic protein CAI14_16975 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CAI14_16975 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CAI14_16985 PF01494 FAD binding domain CAI14_16995 PF00171 Aldehyde dehydrogenase family CAI14_17020 PF11871 Domain of unknown function (DUF3391) CAI14_17020 PF01966 HD domain CAI14_17025 PF07690 Major Facilitator Superfamily CAI14_17035 PF00132 Bacterial transferase hexapeptide (six repeats) CAI14_17050 PF00920 Dehydratase family CAI14_17065 PF05598 Transposase domain (DUF772) CAI14_17095 PF01638 HxlR-like helix-turn-helix CAI14_17100 PF05368 NmrA-like family CAI14_17115 PF03812 2-keto-3-deoxygluconate permease CAI14_17120 PF01717 Cobalamin-independent synthase, Catalytic domain CAI14_17120 PF08267 Cobalamin-independent synthase, N-terminal domain CAI14_17130 PF03358 NADPH-dependent FMN reductase CAI14_17135 PF03466 LysR substrate binding domain CAI14_17135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAI14_17140 PF02677 Epoxyqueuosine reductase QueH CAI14_17155 PF02321 Outer membrane efflux protein CAI14_17160 PF00873 AcrB/AcrD/AcrF family CAI14_17165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CAI14_17165 PF00529 HlyD membrane-fusion protein of T1SS CAI14_17170 PF00512 His Kinase A (phospho-acceptor) domain CAI14_17170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_17170 PF00672 HAMP domain CAI14_17175 PF00072 Response regulator receiver domain CAI14_17175 PF00486 Transcriptional regulatory protein, C terminal CAI14_17180 PF00551 Formyl transferase CAI14_17190 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CAI14_17190 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CAI14_17195 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CAI14_17200 PF02146 Sir2 family CAI14_17215 PF07690 Major Facilitator Superfamily CAI14_17220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAI14_17220 PF03466 LysR substrate binding domain CAI14_17240 PF01026 TatD related DNase CAI14_17245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAI14_17245 PF03466 LysR substrate binding domain CAI14_17250 PF00355 Rieske [2Fe-2S] domain CAI14_17255 PF00111 2Fe-2S iron-sulfur cluster binding domain CAI14_17265 PF00860 Permease family CAI14_17275 PF01156 Inosine-uridine preferring nucleoside hydrolase CAI14_17280 PF01425 Amidase CAI14_17295 PF07690 Major Facilitator Superfamily CAI14_17300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAI14_17300 PF03466 LysR substrate binding domain CAI14_17305 PF07687 Peptidase dimerisation domain CAI14_17305 PF01546 Peptidase family M20/M25/M40 CAI14_17310 PF00266 Aminotransferase class-V CAI14_17325 PF09349 OHCU decarboxylase CAI14_17325 PF01014 Uricase CAI14_17330 PF13454 FAD-NAD(P)-binding CAI14_17335 PF00576 HIUase/Transthyretin family CAI14_17340 PF07308 Protein of unknown function (DUF1456) CAI14_17345 PF00270 DEAD/DEAH box helicase CAI14_17345 PF08482 ATP-dependent helicase C-terminal CAI14_17345 PF00271 Helicase conserved C-terminal domain CAI14_17345 PF04408 Helicase associated domain (HA2) CAI14_17360 PF00849 RNA pseudouridylate synthase CAI14_17370 PF00248 Aldo/keto reductase family CAI14_17375 PF16884 N-terminal domain of oxidoreductase CAI14_17375 PF00107 Zinc-binding dehydrogenase CAI14_17405 PF02566 OsmC-like protein CAI14_17410 PF01047 MarR family CAI14_17415 PF03969 AFG1-like ATPase CAI14_17435 PF07683 Cobalamin synthesis protein cobW C-terminal domain CAI14_17435 PF02492 CobW/HypB/UreG, nucleotide-binding domain CAI14_17490 PF17932 Tetracyclin repressor-like, C-terminal domain CAI14_17490 PF00440 Bacterial regulatory proteins, tetR family CAI14_17495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CAI14_17495 PF02770 Acyl-CoA dehydrogenase, middle domain CAI14_17495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CAI14_17500 PF01039 Carboxyl transferase domain CAI14_17505 PF00289 Biotin carboxylase, N-terminal domain CAI14_17505 PF00364 Biotin-requiring enzyme CAI14_17505 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CAI14_17505 PF18140 Propionyl-coenzyme A carboxylase BT domain CAI14_17505 PF02785 Biotin carboxylase C-terminal domain CAI14_17540 PF00990 Diguanylate cyclase, GGDEF domain CAI14_17545 PF00463 Isocitrate lyase family CAI14_17550 PF01274 Malate synthase CAI14_17555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAI14_17555 PF03466 LysR substrate binding domain CAI14_17560 PF00999 Sodium/hydrogen exchanger family CAI14_17565 PF12833 Helix-turn-helix domain CAI14_17585 PF12706 Beta-lactamase superfamily domain CAI14_17590 PF01432 Peptidase family M3 CAI14_17595 PF01112 Asparaginase CAI14_17605 PF00472 RF-1 domain CAI14_17615 PF00849 RNA pseudouridylate synthase CAI14_17625 PF03109 ABC1 family CAI14_17650 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family CAI14_17655 PF00501 AMP-binding enzyme CAI14_17660 PF03692 Putative zinc- or iron-chelating domain CAI14_17665 PF00561 alpha/beta hydrolase fold CAI14_17670 PF13784 Fic/DOC family N-terminal CAI14_17670 PF02661 Fic/DOC family CAI14_17675 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CAI14_17675 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CAI14_17690 PF00588 SpoU rRNA Methylase family CAI14_17695 PF07690 Major Facilitator Superfamily CAI14_17710 PF02954 Bacterial regulatory protein, Fis family CAI14_17710 PF00158 Sigma-54 interaction domain CAI14_17710 PF00072 Response regulator receiver domain CAI14_17715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_17720 PF00205 Thiamine pyrophosphate enzyme, central domain CAI14_17720 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CAI14_17720 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CAI14_17725 PF00140 Sigma-70 factor, region 1.2 CAI14_17725 PF04542 Sigma-70 region 2 CAI14_17725 PF04539 Sigma-70 region 3 CAI14_17725 PF04545 Sigma-70, region 4 CAI14_17730 PF00813 FliP family CAI14_17740 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CAI14_17750 PF07559 Flagellar basal body protein FlaE CAI14_17750 PF00460 Flagella basal body rod protein CAI14_17750 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CAI14_17755 PF03963 Flagellar hook capping protein - N-terminal region CAI14_17780 PF02874 ATP synthase alpha/beta family, beta-barrel domain CAI14_17780 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CAI14_17780 PF18269 T3SS EscN ATPase C-terminal domain CAI14_17795 PF08345 Flagellar M-ring protein C-terminal CAI14_17795 PF01514 Secretory protein of YscJ/FliF family CAI14_17800 PF02049 Flagellar hook-basal body complex protein FliE CAI14_17815 PF02119 Flagellar P-ring protein CAI14_17830 PF00460 Flagella basal body rod protein CAI14_17830 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CAI14_17835 PF00460 Flagella basal body rod protein CAI14_17835 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CAI14_17840 PF00771 FHIPEP family CAI14_17845 PF01312 FlhB HrpN YscU SpaS Family CAI14_17855 PF01313 Bacterial export proteins, family 3 CAI14_17900 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CAI14_17900 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CAI14_17905 PF02556 Preprotein translocase subunit SecB CAI14_17910 PF00581 Rhodanese-like domain CAI14_17945 PF02803 Thiolase, C-terminal domain CAI14_17945 PF00108 Thiolase, N-terminal domain CAI14_17960 PF00080 Copper/zinc superoxide dismutase (SODC) CAI14_17965 PF00080 Copper/zinc superoxide dismutase (SODC) CAI14_17970 PF00158 Sigma-54 interaction domain CAI14_17970 PF00072 Response regulator receiver domain CAI14_17970 PF02954 Bacterial regulatory protein, Fis family CAI14_17975 PF00512 His Kinase A (phospho-acceptor) domain CAI14_17975 PF00989 PAS fold CAI14_17975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_17980 PF00909 Ammonium Transporter Family CAI14_17985 PF00543 Nitrogen regulatory protein P-II CAI14_17990 PF00120 Glutamine synthetase, catalytic domain CAI14_17990 PF03951 Glutamine synthetase, beta-Grasp domain CAI14_18000 PF02673 Bacitracin resistance protein BacA CAI14_18010 PF08240 Alcohol dehydrogenase GroES-like domain CAI14_18010 PF00107 Zinc-binding dehydrogenase CAI14_18040 PF03061 Thioesterase superfamily CAI14_18045 PF13091 PLD-like domain CAI14_18060 PF01883 Iron-sulfur cluster assembly protein CAI14_18060 PF10609 NUBPL iron-transfer P-loop NTPase CAI14_18115 PF03781 Sulfatase-modifying factor enzyme 1 CAI14_18115 PF12867 DinB superfamily CAI14_18125 PF00528 Binding-protein-dependent transport system inner membrane component CAI14_18130 PF00005 ABC transporter CAI14_18145 PF00005 ABC transporter CAI14_18155 PF01734 Patatin-like phospholipase CAI14_18160 PF07660 Secretin and TonB N terminus short domain CAI14_18160 PF00593 TonB dependent receptor CAI14_18160 PF07715 TonB-dependent Receptor Plug Domain CAI14_18165 PF01037 Lrp/AsnC ligand binding domain CAI14_18170 PF00351 Biopterin-dependent aromatic amino acid hydroxylase CAI14_18185 PF00657 GDSL-like Lipase/Acylhydrolase CAI14_18200 PF04962 KduI/IolB family CAI14_18215 PF00356 Bacterial regulatory proteins, lacI family CAI14_18220 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CAI14_18220 PF04616 Glycosyl hydrolases family 43 CAI14_18225 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CAI14_18235 PF03480 Bacterial extracellular solute-binding protein, family 7 CAI14_18245 PF13472 GDSL-like Lipase/Acylhydrolase family CAI14_18245 PF07859 alpha/beta hydrolase fold CAI14_18250 PF00135 Carboxylesterase family CAI14_18255 PF00248 Aldo/keto reductase family CAI14_18265 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CAI14_18265 PF02806 Alpha amylase, C-terminal all-beta domain CAI14_18265 PF00128 Alpha amylase, catalytic domain CAI14_18270 PF16657 Maltogenic Amylase, C-terminal domain CAI14_18270 PF00128 Alpha amylase, catalytic domain CAI14_18275 PF00128 Alpha amylase, catalytic domain CAI14_18275 PF11896 Domain of unknown function (DUF3416) CAI14_18350 PF00294 pfkB family carbohydrate kinase CAI14_18360 PF12241 Trans-2-enoyl-CoA reductase catalytic region CAI14_18360 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase CAI14_18360 PF07055 Enoyl reductase FAD binding domain CAI14_18390 PF08659 KR domain CAI14_18390 PF14765 Polyketide synthase dehydratase CAI14_18390 PF00550 Phosphopantetheine attachment site CAI14_18390 PF00107 Zinc-binding dehydrogenase CAI14_18390 PF02801 Beta-ketoacyl synthase, C-terminal domain CAI14_18390 PF00109 Beta-ketoacyl synthase, N-terminal domain CAI14_18390 PF16197 Ketoacyl-synthetase C-terminal extension CAI14_18390 PF08240 Alcohol dehydrogenase GroES-like domain CAI14_18390 PF00698 Acyl transferase domain CAI14_18395 PF01553 Acyltransferase CAI14_18410 PF00356 Bacterial regulatory proteins, lacI family CAI14_18425 PF04820 Tryptophan halogenase CAI14_18430 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CAI14_18435 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) CAI14_18445 PF04337 Protein of unknown function, DUF480 CAI14_18455 PF13302 Acetyltransferase (GNAT) domain CAI14_18460 PF00580 UvrD/REP helicase N-terminal domain CAI14_18460 PF13361 UvrD-like helicase C-terminal domain CAI14_18480 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CAI14_18480 PF06827 Zinc finger found in FPG and IleRS CAI14_18480 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CAI14_18510 PF00579 tRNA synthetases class I (W and Y) CAI14_18515 PF01551 Peptidase family M23 CAI14_18515 PF04225 Opacity-associated protein A LysM-like domain CAI14_18520 PF03702 Anhydro-N-acetylmuramic acid kinase CAI14_18530 PF07690 Major Facilitator Superfamily CAI14_18535 PF03372 Endonuclease/Exonuclease/phosphatase family CAI14_18540 PF00156 Phosphoribosyl transferase domain CAI14_18550 PF13614 AAA domain CAI14_18555 PF02195 ParB-like nuclease domain CAI14_18555 PF17762 HTH domain found in ParB protein CAI14_18570 PF01370 NAD dependent epimerase/dehydratase family CAI14_18575 PF00535 Glycosyl transferase family 2 CAI14_18590 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CAI14_18590 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CAI14_18590 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CAI14_18590 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CAI14_18595 PF00692 dUTPase CAI14_18600 PF02441 Flavoprotein CAI14_18600 PF04127 DNA / pantothenate metabolism flavoprotein CAI14_18605 PF04002 RadC-like JAB domain CAI14_18610 PF00750 tRNA synthetases class I (R) CAI14_18610 PF05746 DALR anticodon binding domain CAI14_18610 PF03485 Arginyl tRNA synthetase N terminal domain CAI14_18625 PF00106 short chain dehydrogenase CAI14_18630 PF01757 Acyltransferase family CAI14_18635 PF03033 Glycosyltransferase family 28 N-terminal domain CAI14_18640 PF13193 AMP-binding enzyme C-terminal domain CAI14_18640 PF00975 Thioesterase domain CAI14_18640 PF00668 Condensation domain CAI14_18640 PF00550 Phosphopantetheine attachment site CAI14_18640 PF00501 AMP-binding enzyme CAI14_18645 PF17810 Arginine decarboxylase helical bundle domain CAI14_18645 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CAI14_18645 PF17944 Arginine decarboxylase C-terminal helical extension CAI14_18650 PF17284 Spermidine synthase tetramerisation domain CAI14_18690 PF00543 Nitrogen regulatory protein P-II CAI14_18695 PF04380 Membrane fusogenic activity CAI14_18700 PF13335 Magnesium chelatase, subunit ChlI C-terminal CAI14_18700 PF01078 Magnesium chelatase, subunit ChlI CAI14_18715 PF00563 EAL domain CAI14_18715 PF12792 CSS motif domain associated with EAL CAI14_18720 PF00487 Fatty acid desaturase CAI14_18725 PF00111 2Fe-2S iron-sulfur cluster binding domain CAI14_18725 PF00970 Oxidoreductase FAD-binding domain CAI14_18725 PF00175 Oxidoreductase NAD-binding domain CAI14_18730 PF00440 Bacterial regulatory proteins, tetR family CAI14_18750 PF01139 tRNA-splicing ligase RtcB CAI14_18785 PF01370 NAD dependent epimerase/dehydratase family CAI14_18785 PF08338 Domain of unknown function (DUF1731) CAI14_18790 PF00072 Response regulator receiver domain CAI14_18790 PF00486 Transcriptional regulatory protein, C terminal CAI14_18795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_18795 PF08521 Two-component sensor kinase N-terminal CAI14_18795 PF00512 His Kinase A (phospho-acceptor) domain CAI14_18825 PF00595 PDZ domain CAI14_18845 PF01594 AI-2E family transporter CAI14_18850 PF13419 Haloacid dehalogenase-like hydrolase CAI14_18855 PF00883 Cytosol aminopeptidase family, catalytic domain CAI14_18855 PF02789 Cytosol aminopeptidase family, N-terminal domain CAI14_18870 PF00199 Catalase CAI14_18895 PF00072 Response regulator receiver domain CAI14_18895 PF00196 Bacterial regulatory proteins, luxR family CAI14_18900 PF07730 Histidine kinase CAI14_18905 PF13533 Biotin-lipoyl like CAI14_18910 PF00005 ABC transporter CAI14_18935 PF00892 EamA-like transporter family CAI14_18940 PF00892 EamA-like transporter family CAI14_18960 PF00753 Metallo-beta-lactamase superfamily CAI14_18965 PF00579 tRNA synthetases class I (W and Y) CAI14_18970 PF05532 CsbD-like CAI14_18985 PF00491 Arginase family CAI14_19015 PF02223 Thymidylate kinase CAI14_19065 PF03309 Type III pantothenate kinase CAI14_19070 PF08279 HTH domain CAI14_19070 PF03099 Biotin/lipoate A/B protein ligase family CAI14_19070 PF02237 Biotin protein ligase C terminal domain CAI14_19085 PF06167 Glucose-regulated metallo-peptidase M90 CAI14_19100 PF00512 His Kinase A (phospho-acceptor) domain CAI14_19100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_19100 PF00672 HAMP domain CAI14_19105 PF00072 Response regulator receiver domain CAI14_19105 PF00486 Transcriptional regulatory protein, C terminal CAI14_19115 PF01207 Dihydrouridine synthase (Dus) CAI14_19135 PF06628 Catalase-related immune-responsive CAI14_19135 PF00199 Catalase CAI14_19145 PF13307 Helicase C-terminal domain CAI14_19145 PF06733 DEAD_2 CAI14_19160 PF08501 Shikimate dehydrogenase substrate binding domain CAI14_19160 PF01488 Shikimate / quinate 5-dehydrogenase CAI14_19160 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CAI14_19170 PF00667 FAD binding domain CAI14_19170 PF00175 Oxidoreductase NAD-binding domain CAI14_19170 PF00258 Flavodoxin CAI14_19180 PF03466 LysR substrate binding domain CAI14_19180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAI14_19195 PF00490 Delta-aminolevulinic acid dehydratase CAI14_19225 PF02798 Glutathione S-transferase, N-terminal domain CAI14_19225 PF00043 Glutathione S-transferase, C-terminal domain CAI14_19265 PF00005 ABC transporter CAI14_19275 PF01381 Helix-turn-helix CAI14_19285 PF01229 Glycosyl hydrolases family 39 CAI14_19290 PF02583 Metal-sensitive transcriptional repressor CAI14_19295 PF01545 Cation efflux family CAI14_19295 PF16916 Dimerisation domain of Zinc Transporter CAI14_19305 PF00593 TonB dependent receptor CAI14_19305 PF07715 TonB-dependent Receptor Plug Domain CAI14_19315 PF12833 Helix-turn-helix domain CAI14_19315 PF01965 DJ-1/PfpI family CAI14_19320 PF00970 Oxidoreductase FAD-binding domain CAI14_19320 PF00175 Oxidoreductase NAD-binding domain CAI14_19320 PF00111 2Fe-2S iron-sulfur cluster binding domain CAI14_19325 PF00005 ABC transporter CAI14_19330 PF01061 ABC-2 type transporter CAI14_19340 PF08546 Ketopantoate reductase PanE/ApbA C terminal CAI14_19340 PF02558 Ketopantoate reductase PanE/ApbA CAI14_19375 PF00268 Ribonucleotide reductase, small chain CAI14_19385 PF03477 ATP cone domain CAI14_19385 PF02867 Ribonucleotide reductase, barrel domain CAI14_19385 PF00317 Ribonucleotide reductase, all-alpha domain CAI14_19400 PF13607 Succinyl-CoA ligase like flavodoxin domain CAI14_19400 PF00583 Acetyltransferase (GNAT) family CAI14_19400 PF13380 CoA binding domain CAI14_19410 PF00194 Eukaryotic-type carbonic anhydrase CAI14_19415 PF02254 TrkA-N domain CAI14_19415 PF00999 Sodium/hydrogen exchanger family CAI14_19425 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CAI14_19425 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CAI14_19430 PF00723 Glycosyl hydrolases family 15 CAI14_19445 PF05166 YcgL domain CAI14_19450 PF02801 Beta-ketoacyl synthase, C-terminal domain CAI14_19450 PF00109 Beta-ketoacyl synthase, N-terminal domain CAI14_19510 PF07977 FabA-like domain CAI14_19515 PF01553 Acyltransferase CAI14_19525 PF00550 Phosphopantetheine attachment site CAI14_19530 PF04820 Tryptophan halogenase CAI14_19555 PF00326 Prolyl oligopeptidase family CAI14_19555 PF07676 WD40-like Beta Propeller Repeat CAI14_19575 PF01218 Coproporphyrinogen III oxidase CAI14_19585 PF00476 DNA polymerase family A CAI14_19585 PF01367 5'-3' exonuclease, C-terminal SAM fold CAI14_19585 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CAI14_19585 PF01612 3'-5' exonuclease CAI14_19655 PF04717 Type VI secretion system, phage-baseplate injector CAI14_19670 PF00069 Protein kinase domain CAI14_19670 PF03793 PASTA domain CAI14_19680 PF08281 Sigma-70, region 4 CAI14_19680 PF04542 Sigma-70 region 2 CAI14_19700 PF00328 Histidine phosphatase superfamily (branch 2) CAI14_19770 PF05638 Type VI secretion system effector, Hcp CAI14_19805 PF12464 Maltose acetyltransferase CAI14_19805 PF14602 Hexapeptide repeat of succinyl-transferase CAI14_19815 PF13361 UvrD-like helicase C-terminal domain CAI14_19815 PF00580 UvrD/REP helicase N-terminal domain CAI14_19830 PF13396 Phospholipase_D-nuclease N-terminal CAI14_19830 PF13091 PLD-like domain CAI14_19835 PF03466 LysR substrate binding domain CAI14_19835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAI14_19840 PF03737 Aldolase/RraA CAI14_19845 PF04303 PrpF protein CAI14_19855 PF04909 Amidohydrolase CAI14_19860 PF00471 Ribosomal protein L33 CAI14_19865 PF00830 Ribosomal L28 family CAI14_19870 PF00873 AcrB/AcrD/AcrF family CAI14_19885 PF13533 Biotin-lipoyl like CAI14_19905 PF02527 rRNA small subunit methyltransferase G CAI14_19910 PF09423 PhoD-like phosphatase CAI14_19910 PF16655 PhoD-like phosphatase, N-terminal domain CAI14_19915 PF09423 PhoD-like phosphatase CAI14_19915 PF16655 PhoD-like phosphatase, N-terminal domain CAI14_19920 PF01648 4'-phosphopantetheinyl transferase superfamily CAI14_19925 PF04226 Transglycosylase associated protein CAI14_19935 PF03372 Endonuclease/Exonuclease/phosphatase family CAI14_19940 PF00480 ROK family CAI14_19950 PF09312 SurA N-terminal domain CAI14_19950 PF00639 PPIC-type PPIASE domain CAI14_19960 PF00474 Sodium:solute symporter family CAI14_19965 PF04341 Protein of unknown function, DUF485 CAI14_19975 PF00501 AMP-binding enzyme CAI14_19975 PF13193 AMP-binding enzyme C-terminal domain CAI14_19975 PF16177 Acetyl-coenzyme A synthetase N-terminus CAI14_19985 PF00196 Bacterial regulatory proteins, luxR family CAI14_19985 PF00072 Response regulator receiver domain CAI14_20015 PF04616 Glycosyl hydrolases family 43 CAI14_20015 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CAI14_20025 PF00248 Aldo/keto reductase family CAI14_20040 PF01557 Fumarylacetoacetate (FAA) hydrolase family CAI14_20050 PF13378 Enolase C-terminal domain-like CAI14_20050 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CAI14_20055 PF05336 L-rhamnose mutarotase CAI14_20060 PF07690 Major Facilitator Superfamily CAI14_20065 PF09339 IclR helix-turn-helix domain CAI14_20065 PF01614 Bacterial transcriptional regulator CAI14_20075 PF02659 Putative manganese efflux pump CAI14_20080 PF00512 His Kinase A (phospho-acceptor) domain CAI14_20080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_20095 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain CAI14_20095 PF06165 Glycosyltransferase family 36 CAI14_20115 PF01011 PQQ enzyme repeat CAI14_20115 PF13360 PQQ-like domain CAI14_20115 PF13570 PQQ-like domain CAI14_20135 PF04357 TamB, inner membrane protein subunit of TAM complex CAI14_20140 PF01103 Surface antigen CAI14_20140 PF17243 POTRA domain TamA domain 1 CAI14_20185 PF02092 Glycyl-tRNA synthetase beta subunit CAI14_20185 PF05746 DALR anticodon binding domain CAI14_20190 PF02091 Glycyl-tRNA synthetase alpha subunit CAI14_20210 PF00117 Glutamine amidotransferase class-I CAI14_20210 PF00958 GMP synthase C terminal domain CAI14_20220 PF00902 Sec-independent protein translocase protein (TatC) CAI14_20225 PF02416 mttA/Hcf106 family CAI14_20230 PF02416 mttA/Hcf106 family CAI14_20240 PF00762 Ferrochelatase CAI14_20245 PF12697 Alpha/beta hydrolase family CAI14_20265 PF04381 Putative exonuclease, RdgC CAI14_20270 PF01171 PP-loop family CAI14_20285 PF00356 Bacterial regulatory proteins, lacI family CAI14_20300 PF13378 Enolase C-terminal domain-like CAI14_20300 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CAI14_20305 PF04616 Glycosyl hydrolases family 43 CAI14_20305 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CAI14_20310 PF14310 Fibronectin type III-like domain CAI14_20310 PF00933 Glycosyl hydrolase family 3 N terminal domain CAI14_20310 PF01915 Glycosyl hydrolase family 3 C-terminal domain CAI14_20310 PF07691 PA14 domain CAI14_20315 PF08125 Mannitol dehydrogenase C-terminal domain CAI14_20315 PF01232 Mannitol dehydrogenase Rossmann domain CAI14_20360 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) CAI14_20415 PF00239 Resolvase, N terminal domain CAI14_20415 PF02796 Helix-turn-helix domain of resolvase CAI14_20465 PF03695 Uncharacterised protein family (UPF0149) CAI14_20465 PF02810 SEC-C motif CAI14_20485 PF02796 Helix-turn-helix domain of resolvase CAI14_20485 PF00239 Resolvase, N terminal domain CAI14_20505 PF07883 Cupin domain CAI14_20520 PF00155 Aminotransferase class I and II CAI14_20525 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CAI14_20555 PF17863 AAA lid domain CAI14_20555 PF07726 ATPase family associated with various cellular activities (AAA) CAI14_20595 PF00083 Sugar (and other) transporter CAI14_20595 PF08946 Osmosensory transporter coiled coil CAI14_20605 PF00085 Thioredoxin CAI14_20620 PF13344 Haloacid dehalogenase-like hydrolase CAI14_20620 PF00293 NUDIX domain CAI14_20630 PF16485 Protealysin propeptide CAI14_20630 PF01447 Thermolysin metallopeptidase, catalytic domain CAI14_20630 PF02868 Thermolysin metallopeptidase, alpha-helical domain CAI14_20650 PF05532 CsbD-like CAI14_20675 PF02525 Flavodoxin-like fold CAI14_20695 PF00106 short chain dehydrogenase CAI14_20715 PF03006 Haemolysin-III related CAI14_20720 PF00270 DEAD/DEAH box helicase CAI14_20720 PF00271 Helicase conserved C-terminal domain CAI14_20720 PF09369 Domain of unknown function (DUF1998) CAI14_20815 PF00685 Sulfotransferase domain CAI14_20820 PF02603 HPr Serine kinase N terminus CAI14_20820 PF07475 HPr Serine kinase C-terminal domain CAI14_20835 PF13537 Glutamine amidotransferase domain CAI14_20835 PF00733 Asparagine synthase CAI14_20850 PF00005 ABC transporter CAI14_20850 PF00664 ABC transporter transmembrane region CAI14_20865 PF16363 GDP-mannose 4,6 dehydratase CAI14_20900 PF00534 Glycosyl transferases group 1 CAI14_20900 PF13439 Glycosyltransferase Family 4 CAI14_20925 PF02350 UDP-N-acetylglucosamine 2-epimerase CAI14_20930 PF02397 Bacterial sugar transferase CAI14_20950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAI14_20950 PF03466 LysR substrate binding domain CAI14_20980 PF04898 Glutamate synthase central domain CAI14_20980 PF01493 GXGXG motif CAI14_20980 PF01645 Conserved region in glutamate synthase CAI14_20980 PF00310 Glutamine amidotransferases class-II CAI14_20985 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CAI14_20985 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAI14_20990 PF00107 Zinc-binding dehydrogenase CAI14_20990 PF08240 Alcohol dehydrogenase GroES-like domain CAI14_21000 PF00150 Cellulase (glycosyl hydrolase family 5) CAI14_21010 PF00150 Cellulase (glycosyl hydrolase family 5) CAI14_21020 PF00150 Cellulase (glycosyl hydrolase family 5) CAI14_21030 PF04389 Peptidase family M28 CAI14_21040 PF01551 Peptidase family M23 CAI14_21045 PF03572 Peptidase family S41 CAI14_21045 PF13180 PDZ domain CAI14_21050 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CAI14_21050 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CAI14_21065 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CAI14_21100 PF13396 Phospholipase_D-nuclease N-terminal CAI14_21100 PF13091 PLD-like domain CAI14_21110 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CAI14_21115 PF02472 Biopolymer transport protein ExbD/TolR CAI14_21120 PF02472 Biopolymer transport protein ExbD/TolR CAI14_21125 PF01618 MotA/TolQ/ExbB proton channel family CAI14_21140 PF01435 Peptidase family M48 CAI14_21150 PF18053 DNA gyrase B subunit insert domain CAI14_21150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_21150 PF01751 Toprim domain CAI14_21150 PF00204 DNA gyrase B CAI14_21150 PF00986 DNA gyrase B subunit, carboxyl terminus CAI14_21155 PF02463 RecF/RecN/SMC N terminal domain CAI14_21160 PF02768 DNA polymerase III beta subunit, C-terminal domain CAI14_21160 PF00712 DNA polymerase III beta subunit, N-terminal domain CAI14_21160 PF02767 DNA polymerase III beta subunit, central domain CAI14_21165 PF11638 DnaA N-terminal domain CAI14_21165 PF08299 Bacterial dnaA protein helix-turn-helix CAI14_21165 PF00308 Bacterial dnaA protein CAI14_21170 PF00468 Ribosomal protein L34 CAI14_21175 PF00825 Ribonuclease P CAI14_21180 PF02096 60Kd inner membrane protein CAI14_21180 PF14849 YidC periplasmic domain CAI14_21185 PF01522 Polysaccharide deacetylase CAI14_21190 PF10396 GTP-binding protein TrmE N-terminus CAI14_21190 PF01926 50S ribosome-binding GTPase CAI14_21190 PF12631 MnmE helical domain CAI14_21195 PF01569 PAP2 superfamily CAI14_21205 PF03009 Glycerophosphoryl diester phosphodiesterase family CAI14_21210 PF01694 Rhomboid family CAI14_21220 PF03741 Integral membrane protein TerC family CAI14_21230 PF10672 S-adenosylmethionine-dependent methyltransferase CAI14_21230 PF17785 PUA-like domain CAI14_21260 PF10947 Protein of unknown function (DUF2628) CAI14_21275 PF13520 Amino acid permease CAI14_21285 PF13417 Glutathione S-transferase, N-terminal domain CAI14_21285 PF00043 Glutathione S-transferase, C-terminal domain CAI14_21300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAI14_21300 PF03466 LysR substrate binding domain CAI14_21305 PF00107 Zinc-binding dehydrogenase CAI14_21305 PF08240 Alcohol dehydrogenase GroES-like domain CAI14_21310 PF02646 RmuC family CAI14_21320 PF00255 Glutathione peroxidase CAI14_21330 PF04333 MlaA lipoprotein CAI14_21340 PF05494 MlaC protein CAI14_21345 PF02470 MlaD protein CAI14_21350 PF02405 Permease MlaE CAI14_21355 PF00005 ABC transporter CAI14_21370 PF17946 RecC C-terminal domain CAI14_21375 PF12705 PD-(D/E)XK nuclease superfamily CAI14_21375 PF00580 UvrD/REP helicase N-terminal domain CAI14_21375 PF13361 UvrD-like helicase C-terminal domain CAI14_21380 PF13538 UvrD-like helicase C-terminal domain CAI14_21395 PF05598 Transposase domain (DUF772) CAI14_21395 PF01609 Transposase DDE domain CAI14_21430 PF01425 Amidase CAI14_21435 PF02785 Biotin carboxylase C-terminal domain CAI14_21435 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CAI14_21435 PF00364 Biotin-requiring enzyme CAI14_21435 PF00289 Biotin carboxylase, N-terminal domain CAI14_21470 PF00849 RNA pseudouridylate synthase CAI14_21540 PF01850 PIN domain CAI14_21565 PF13091 PLD-like domain CAI14_21565 PF13396 Phospholipase_D-nuclease N-terminal CAI14_21570 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family CAI14_21575 PF00083 Sugar (and other) transporter CAI14_21580 PF04632 Fusaric acid resistance protein family CAI14_21585 PF02321 Outer membrane efflux protein CAI14_21590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CAI14_21590 PF00529 HlyD membrane-fusion protein of T1SS CAI14_21595 PF07869 Protein of unknown function (DUF1656) CAI14_21605 PF01227 GTP cyclohydrolase I CAI14_21625 PF01925 Sulfite exporter TauE/SafE CAI14_21630 PF02810 SEC-C motif CAI14_21640 PF01263 Aldose 1-epimerase CAI14_21655 PF01126 Heme oxygenase CAI14_21660 PF00360 Phytochrome region CAI14_21660 PF08446 PAS fold CAI14_21660 PF13426 PAS domain CAI14_21660 PF01590 GAF domain CAI14_21665 PF03594 Benzoate membrane transport protein CAI14_21695 PF01619 Proline dehydrogenase CAI14_21695 PF14850 DNA-binding domain of Proline dehydrogenase CAI14_21695 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CAI14_21695 PF00171 Aldehyde dehydrogenase family CAI14_21705 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CAI14_21705 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CAI14_21710 PF00115 Cytochrome C and Quinol oxidase polypeptide I CAI14_21720 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 CAI14_21725 PF00510 Cytochrome c oxidase subunit III CAI14_21750 PF01040 UbiA prenyltransferase family CAI14_21760 PF13593 SBF-like CPA transporter family (DUF4137) CAI14_21765 PF01807 CHC2 zinc finger CAI14_21765 PF10410 DnaB-helicase binding domain of primase CAI14_21765 PF08275 DNA primase catalytic core, N-terminal domain CAI14_21765 PF08278 DNA primase DnaG DnaB-binding CAI14_21770 PF03631 Virulence factor BrkB CAI14_21780 PF09424 Yqey-like protein CAI14_21785 PF01165 Ribosomal protein S21 CAI14_21790 PF00814 Glycoprotease family CAI14_21795 PF02152 Dihydroneopterin aldolase CAI14_21800 PF01915 Glycosyl hydrolase family 3 C-terminal domain CAI14_21800 PF14310 Fibronectin type III-like domain CAI14_21800 PF00933 Glycosyl hydrolase family 3 N terminal domain CAI14_21805 PF07995 Glucose / Sorbosone dehydrogenase CAI14_21810 PF05360 yiaA/B two helix domain CAI14_21825 PF13520 Amino acid permease CAI14_21835 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CAI14_21835 PF13378 Enolase C-terminal domain-like CAI14_21845 PF01510 N-acetylmuramoyl-L-alanine amidase CAI14_21850 PF01427 D-ala-D-ala dipeptidase CAI14_21900 PF07063 Domain of unknown function (DUF1338) CAI14_21905 PF00873 AcrB/AcrD/AcrF family CAI14_21910 PF00873 AcrB/AcrD/AcrF family CAI14_21915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CAI14_21920 PF01546 Peptidase family M20/M25/M40 CAI14_21920 PF07687 Peptidase dimerisation domain CAI14_21925 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CAI14_21925 PF14489 QueF-like protein CAI14_21930 PF04972 BON domain CAI14_21930 PF01476 LysM domain CAI14_21940 PF09827 CRISPR associated protein Cas2 CAI14_21945 PF01867 CRISPR associated protein Cas1 CAI14_21965 PF09704 CRISPR-associated protein (Cas_Cas5) CAI14_21980 PF03971 Monomeric isocitrate dehydrogenase CAI14_21990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAI14_21990 PF03466 LysR substrate binding domain CAI14_21995 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) CAI14_22000 PF07497 Rho termination factor, RNA-binding domain CAI14_22000 PF07498 Rho termination factor, N-terminal domain CAI14_22000 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CAI14_22005 PF00085 Thioredoxin CAI14_22010 PF12300 ATP-dependent RNA helicase RhlB CAI14_22010 PF00271 Helicase conserved C-terminal domain CAI14_22010 PF00270 DEAD/DEAH box helicase CAI14_22015 PF00005 ABC transporter CAI14_22020 PF18075 FtsX extracellular domain CAI14_22025 PF00072 Response regulator receiver domain CAI14_22030 PF03167 Uracil DNA glycosylase superfamily CAI14_22035 PF04542 Sigma-70 region 2 CAI14_22035 PF04545 Sigma-70, region 4 CAI14_22045 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAI14_22060 PF00043 Glutathione S-transferase, C-terminal domain CAI14_22060 PF13417 Glutathione S-transferase, N-terminal domain CAI14_22065 PF17764 3′ DNA-binding domain (3′BD) CAI14_22065 PF00270 DEAD/DEAH box helicase CAI14_22065 PF18074 Primosomal protein N C-terminal domain CAI14_22065 PF00271 Helicase conserved C-terminal domain CAI14_22065 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CAI14_22085 PF01554 MatE CAI14_22090 PF01343 Peptidase family S49 CAI14_22115 PF01300 Telomere recombination CAI14_22120 PF01131 DNA topoisomerase CAI14_22120 PF01751 Toprim domain CAI14_22120 PF13368 Topoisomerase C-terminal repeat CAI14_22130 PF07963 Prokaryotic N-terminal methylation motif CAI14_22130 PF00114 Pilin (bacterial filament) CAI14_22135 PF04361 Protein of unknown function (DUF494) CAI14_22140 PF02481 DNA recombination-mediator protein A CAI14_22140 PF17782 DprA winged helix domain CAI14_22145 PF01476 LysM domain CAI14_22150 PF01327 Polypeptide deformylase CAI14_22155 PF00551 Formyl transferase CAI14_22155 PF02911 Formyl transferase, C-terminal domain CAI14_22160 PF01029 NusB family CAI14_22160 PF01189 16S rRNA methyltransferase RsmB/F CAI14_22175 PF00535 Glycosyl transferase family 2 CAI14_22195 PF00925 GTP cyclohydrolase II CAI14_22215 PF03279 Bacterial lipid A biosynthesis acyltransferase CAI14_22220 PF02580 D-Tyr-tRNA(Tyr) deacylase CAI14_22225 PF04542 Sigma-70 region 2 CAI14_22225 PF04546 Sigma-70, non-essential region CAI14_22225 PF03979 Sigma-70 factor, region 1.1 CAI14_22225 PF04545 Sigma-70, region 4 CAI14_22225 PF00140 Sigma-70 factor, region 1.2 CAI14_22225 PF04539 Sigma-70 region 3 CAI14_22300 PF02525 Flavodoxin-like fold CAI14_22305 PF03466 LysR substrate binding domain CAI14_22305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAI14_22320 PF02203 Tar ligand binding domain homologue CAI14_22320 PF00672 HAMP domain CAI14_22320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAI14_22335 PF01042 Endoribonuclease L-PSP CAI14_22340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAI14_22340 PF03466 LysR substrate binding domain CAI14_22350 PF00005 ABC transporter CAI14_22365 PF07715 TonB-dependent Receptor Plug Domain CAI14_22365 PF00593 TonB dependent receptor CAI14_22410 PF00107 Zinc-binding dehydrogenase CAI14_22410 PF13823 Alcohol dehydrogenase GroES-associated CAI14_22410 PF08240 Alcohol dehydrogenase GroES-like domain CAI14_22435 PF00664 ABC transporter transmembrane region CAI14_22435 PF00005 ABC transporter CAI14_22455 PF03275 UDP-galactopyranose mutase CAI14_22465 PF16363 GDP-mannose 4,6 dehydratase CAI14_22490 PF02322 Cytochrome bd terminal oxidase subunit II CAI14_22495 PF01654 Cytochrome bd terminal oxidase subunit I CAI14_22510 PF02954 Bacterial regulatory protein, Fis family CAI14_22510 PF00072 Response regulator receiver domain CAI14_22510 PF00158 Sigma-54 interaction domain CAI14_22525 PF01339 CheB methylesterase CAI14_22525 PF01739 CheR methyltransferase, SAM binding domain CAI14_22525 PF03705 CheR methyltransferase, all-alpha domain CAI14_22525 PF08448 PAS fold CAI14_22545 PF05067 Manganese containing catalase CAI14_22550 PF05974 Domain of unknown function (DUF892) CAI14_22575 PF02743 Cache domain CAI14_22575 PF00672 HAMP domain CAI14_22575 PF06580 Histidine kinase CAI14_22575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_22580 PF04397 LytTr DNA-binding domain CAI14_22580 PF00072 Response regulator receiver domain CAI14_22590 PF13520 Amino acid permease CAI14_22610 PF01431 Peptidase family M13 CAI14_22610 PF05649 Peptidase family M13 CAI14_22615 PF00535 Glycosyl transferase family 2 CAI14_22625 PF00248 Aldo/keto reductase family CAI14_22630 PF03358 NADPH-dependent FMN reductase CAI14_22645 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CAI14_22655 PF03167 Uracil DNA glycosylase superfamily CAI14_22660 PF02469 Fasciclin domain CAI14_22670 PF00999 Sodium/hydrogen exchanger family CAI14_22675 PF00005 ABC transporter CAI14_22680 PF01061 ABC-2 type transporter CAI14_22710 PF13677 Membrane MotB of proton-channel complex MotA/MotB CAI14_22710 PF00691 OmpA family CAI14_22715 PF01618 MotA/TolQ/ExbB proton channel family CAI14_22725 PF01641 SelR domain CAI14_22735 PF01037 Lrp/AsnC ligand binding domain CAI14_22740 PF01266 FAD dependent oxidoreductase CAI14_22745 PF00842 Alanine racemase, C-terminal domain CAI14_22745 PF01168 Alanine racemase, N-terminal domain CAI14_22765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_22765 PF00512 His Kinase A (phospho-acceptor) domain CAI14_22765 PF00989 PAS fold CAI14_22785 PF05175 Methyltransferase small domain CAI14_22785 PF08468 Methyltransferase small domain N-terminal CAI14_22790 PF00849 RNA pseudouridylate synthase CAI14_22790 PF01479 S4 domain CAI14_22795 PF13419 Haloacid dehalogenase-like hydrolase CAI14_22820 PF00989 PAS fold CAI14_22820 PF00512 His Kinase A (phospho-acceptor) domain CAI14_22820 PF18415 Histidine kinase receptor ArcB trans-membrane domain CAI14_22820 PF01627 Hpt domain CAI14_22820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAI14_22820 PF00072 Response regulator receiver domain CAI14_22830 PF04461 Protein of unknown function (DUF520) CAI14_22835 PF00892 EamA-like transporter family CAI14_22845 PF00528 Binding-protein-dependent transport system inner membrane component CAI14_22850 PF03180 NLPA lipoprotein CAI14_22890 PF02817 e3 binding domain CAI14_22890 PF00364 Biotin-requiring enzyme CAI14_22890 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CAI14_22900 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CAI14_22900 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAI14_22920 PF00119 ATP synthase A chain CAI14_22925 PF00137 ATP synthase subunit C CAI14_22930 PF00430 ATP synthase B/B' CF(0) CAI14_22980 PF13614 AAA domain CAI14_23080 PF04610 TrbL/VirB6 plasmid conjugal transfer protein CAI14_23090 PF03524 Conjugal transfer protein CAI14_23095 PF03743 Bacterial conjugation TrbI-like protein CAI14_23100 PF00437 Type II/IV secretion system protein CAI14_23105 PF01464 Transglycosylase SLT domain CAI14_23130 PF08751 TrwC relaxase CAI14_23130 PF18340 DNA relaxase TraI 2B/2B-like domain CAI14_23130 PF07057 DNA helicase TraI CAI14_23130 PF18272 single-stranded DNA binding TraI N-terminal subdomain CAI14_23190 PF07015 VirC1 protein CAI14_23315 PF01850 PIN domain CAI14_23350 PF11740 Plasmid replication region DNA-binding N-term CAI14_23360 PF02534 Type IV secretory system Conjugative DNA transfer CAI14_23365 PF06412 Conjugal transfer protein TraD CAI14_23370 PF07820 TraC-like protein CAI14_23375 PF01443 Viral (Superfamily 1) RNA helicase CAI14_23375 PF03389 MobA/MobL family CAI14_23375 PF17841 BID domain of Bartonella effector protein (Bep) CAI14_23390 PF13180 PDZ domain CAI14_23390 PF00595 PDZ domain CAI14_23430 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CAI14_23430 PF01619 Proline dehydrogenase CAI14_23430 PF14850 DNA-binding domain of Proline dehydrogenase CAI14_23430 PF00171 Aldehyde dehydrogenase family CAI14_23455 PF00145 C-5 cytosine-specific DNA methylase CAI14_23475 PF01526 Tn3 transposase DDE domain CAI14_23475 PF13700 Domain of unknown function (DUF4158) CAI14_23505 PF13614 AAA domain CAI14_23520 PF02796 Helix-turn-helix domain of resolvase CAI14_23520 PF00239 Resolvase, N terminal domain CAI14_23565 PF01936 NYN domain CAI14_23565 PF09722 Protein of unknown function (DUF2384) CAI14_23635 PF01619 Proline dehydrogenase CAI14_23635 PF14850 DNA-binding domain of Proline dehydrogenase CAI14_23635 PF00171 Aldehyde dehydrogenase family CAI14_23635 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CAI14_23650 PF03695 Uncharacterised protein family (UPF0149) CAI14_23650 PF02810 SEC-C motif CAI14_23670 PF05394 Avirulence protein