locus-tag class description DOO79_00020 IPR011051 RmlC-like cupin domain superfamily DOO79_00020 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related DOO79_00020 IPR014710 RmlC-like jelly roll fold DOO79_00050 IPR039653 Prenyltransferase DOO79_00050 IPR023214 HAD superfamily DOO79_00050 IPR036412 HAD-like superfamily DOO79_00050 IPR000537 UbiA prenyltransferase family DOO79_00055 IPR016169 FAD-binding, type PCMH, subdomain 2 DOO79_00055 IPR036318 FAD-binding, type PCMH-like superfamily DOO79_00055 IPR006094 FAD linked oxidase, N-terminal DOO79_00055 IPR007173 D-arabinono-1,4-lactone oxidase DOO79_00055 IPR016166 FAD-binding domain, PCMH-type DOO79_00060 IPR002347 Short-chain dehydrogenase/reductase SDR DOO79_00060 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOO79_00060 IPR036291 NAD(P)-binding domain superfamily DOO79_00070 IPR001509 NAD-dependent epimerase/dehydratase DOO79_00070 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase DOO79_00070 IPR036291 NAD(P)-binding domain superfamily DOO79_00105 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOO79_00105 IPR029044 Nucleotide-diphospho-sugar transferases DOO79_00105 IPR001173 Glycosyltransferase 2-like DOO79_00115 IPR003593 AAA+ ATPase domain DOO79_00115 IPR029439 Wzt, C-terminal DOO79_00115 IPR003439 ABC transporter-like DOO79_00115 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_00125 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme DOO79_00125 IPR015424 Pyridoxal phosphate-dependent transferase DOO79_00125 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOO79_00125 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOO79_00130 IPR005857 Cystathionine beta-synthase DOO79_00130 IPR000644 CBS domain DOO79_00130 IPR001926 Pyridoxal-phosphate dependent enzyme DOO79_00130 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DOO79_00150 IPR003593 AAA+ ATPase domain DOO79_00150 IPR001482 Type II/IV secretion system protein DOO79_00150 IPR006321 Pilus retraction protein PilT DOO79_00150 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_00155 IPR010987 Glutathione S-transferase, C-terminal-like DOO79_00155 IPR036249 Thioredoxin-like superfamily DOO79_00155 IPR034333 Glutathione S-transferases, class Zeta , N-terminal DOO79_00155 IPR034330 Glutathione S-transferases, class Zeta , C-terminal DOO79_00155 IPR005955 Glutathione S-transferases, class Zeta DOO79_00155 IPR004046 Glutathione S-transferase, C-terminal DOO79_00155 IPR004045 Glutathione S-transferase, N-terminal DOO79_00155 IPR040079 Glutathione Transferase family DOO79_00155 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DOO79_00170 IPR011545 DEAD/DEAH box helicase domain DOO79_00170 IPR028622 ATP-dependent RNA helicase RhlE DOO79_00170 IPR001650 Helicase, C-terminal DOO79_00170 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_00170 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DOO79_00170 IPR014014 RNA helicase, DEAD-box type, Q motif DOO79_00170 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOO79_00180 IPR010101 TonB-dependent vitamin B12 transporter BtuB DOO79_00180 IPR039426 Vitamin B12 transporter BtuB-like DOO79_00180 IPR012910 TonB-dependent receptor, plug domain DOO79_00180 IPR000531 TonB-dependent receptor-like, beta-barrel DOO79_00180 IPR010916 TonB box, conserved site DOO79_00180 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DOO79_00180 IPR010917 TonB-dependent receptor, conserved site DOO79_00180 IPR037066 TonB-dependent receptor, plug domain superfamily DOO79_00190 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily DOO79_00190 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family DOO79_00200 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_00200 IPR004472 Dethiobiotin synthase BioD DOO79_00210 IPR000614 Free Met sulfoxide reductase conserved site DOO79_00210 IPR003018 GAF domain DOO79_00210 IPR029016 GAF-like domain superfamily DOO79_00220 IPR029058 Alpha/Beta hydrolase fold DOO79_00220 IPR000801 Putative esterase DOO79_00225 IPR037066 TonB-dependent receptor, plug domain superfamily DOO79_00225 IPR039426 Vitamin B12 transporter BtuB-like DOO79_00225 IPR000531 TonB-dependent receptor-like, beta-barrel DOO79_00225 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DOO79_00225 IPR010917 TonB-dependent receptor, conserved site DOO79_00225 IPR010105 TonB-dependent siderophore receptor DOO79_00225 IPR012910 TonB-dependent receptor, plug domain DOO79_00230 IPR037512 Phosphoglycolate phosphatase, prokaryotic DOO79_00230 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DOO79_00230 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic DOO79_00230 IPR023214 HAD superfamily DOO79_00230 IPR041492 Haloacid dehalogenase-like hydrolase DOO79_00230 IPR006439 HAD hydrolase, subfamily IA DOO79_00230 IPR036412 HAD-like superfamily DOO79_00235 IPR017961 DNA polymerase, Y-family, little finger domain DOO79_00235 IPR001126 UmuC domain DOO79_00235 IPR036775 DNA polymerase, Y-family, little finger domain superfamily DOO79_00235 IPR022880 DNA polymerase IV DOO79_00240 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ DOO79_00240 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA DOO79_00240 IPR029069 HotDog domain superfamily DOO79_00245 IPR000794 Beta-ketoacyl synthase DOO79_00245 IPR018201 Beta-ketoacyl synthase, active site DOO79_00245 IPR014031 Beta-ketoacyl synthase, C-terminal DOO79_00245 IPR014030 Beta-ketoacyl synthase, N-terminal DOO79_00245 IPR016039 Thiolase-like DOO79_00245 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DOO79_00255 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 DOO79_00255 IPR001567 Peptidase M3A/M3B catalytic domain DOO79_00270 IPR001117 Multicopper oxidase, type 1 DOO79_00270 IPR011706 Multicopper oxidase, type 2 DOO79_00270 IPR011707 Multicopper oxidase, type 3 DOO79_00270 IPR008972 Cupredoxin DOO79_00270 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DOO79_00270 IPR006311 Twin-arginine translocation pathway, signal sequence DOO79_00270 IPR034279 Copper resistance protein, third cupredoxin domain DOO79_00270 IPR034282 Copper resistance protein CopA, second cupredoxin domain DOO79_00270 IPR002355 Multicopper oxidase, copper-binding site DOO79_00270 IPR006376 Copper-resistance protein CopA DOO79_00270 IPR034284 Copper resistance protein, first cupredoxin domain DOO79_00270 IPR033138 Multicopper oxidases, conserved site DOO79_00275 IPR007939 Copper resistance B precursor DOO79_00280 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOO79_00280 IPR018146 Glyoxalase I, conserved site DOO79_00280 IPR037523 Vicinal oxygen chelate (VOC) domain DOO79_00280 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DOO79_00280 IPR004361 Glyoxalase I DOO79_00310 IPR001347 Sugar isomerase (SIS) DOO79_00310 IPR035466 GlmS/AgaS, SIS domain 1 DOO79_00310 IPR017932 Glutamine amidotransferase type 2 domain DOO79_00310 IPR029055 Nucleophile aminohydrolases, N-terminal DOO79_00310 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising DOO79_00310 IPR035490 GlmS/FrlB, SIS domain 2 DOO79_00315 IPR006143 RND efflux pump, membrane fusion protein DOO79_00315 IPR030190 Macrolide export protein MacA DOO79_00315 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DOO79_00320 IPR017871 ABC transporter, conserved site DOO79_00320 IPR025857 MacB-like periplasmic core domain DOO79_00320 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_00320 IPR003593 AAA+ ATPase domain DOO79_00320 IPR003439 ABC transporter-like DOO79_00320 IPR003838 ABC transporter permease protein domain DOO79_00320 IPR017911 ABC transporter, macrolide export, ATP-binding domain DOO79_00325 IPR003838 ABC transporter permease protein domain DOO79_00325 IPR005085 Carbohydrate binding module family 25 DOO79_00325 IPR025857 MacB-like periplasmic core domain DOO79_00330 IPR003838 ABC transporter permease protein domain DOO79_00330 IPR005085 Carbohydrate binding module family 25 DOO79_00330 IPR025857 MacB-like periplasmic core domain DOO79_00340 IPR003593 AAA+ ATPase domain DOO79_00340 IPR011006 CheY-like superfamily DOO79_00340 IPR009057 Homeobox-like domain superfamily DOO79_00340 IPR002197 DNA binding HTH domain, Fis-type DOO79_00340 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_00340 IPR001789 Signal transduction response regulator, receiver domain DOO79_00340 IPR029995 Transcriptional activator SfnR/FlbD DOO79_00340 IPR025944 Sigma-54 interaction domain, conserved site DOO79_00340 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DOO79_00340 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DOO79_00340 IPR002078 RNA polymerase sigma factor 54 interaction domain DOO79_00345 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_00345 IPR029151 Periplasmic sensor-like domain superfamily DOO79_00345 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_00345 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOO79_00345 IPR005467 Histidine kinase domain DOO79_00345 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_00345 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_00350 IPR018357 Hexapeptide transferase, conserved site DOO79_00350 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase DOO79_00350 IPR038009 GlmU, C-terminal LbH domain DOO79_00350 IPR025877 MobA-like NTP transferase DOO79_00350 IPR029044 Nucleotide-diphospho-sugar transferases DOO79_00350 IPR011004 Trimeric LpxA-like superfamily DOO79_00350 IPR001451 Hexapeptide repeat DOO79_00365 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily DOO79_00365 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit DOO79_00365 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal DOO79_00365 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal DOO79_00365 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain DOO79_00370 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_00370 IPR003593 AAA+ ATPase domain DOO79_00370 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily DOO79_00370 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain DOO79_00370 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal DOO79_00370 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site DOO79_00370 IPR005722 ATP synthase, F1 complex, beta subunit DOO79_00370 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain DOO79_00375 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site DOO79_00375 IPR000131 ATP synthase, F1 complex, gamma subunit DOO79_00375 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily DOO79_00380 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain DOO79_00380 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily DOO79_00380 IPR000793 ATP synthase, alpha subunit, C-terminal DOO79_00380 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily DOO79_00380 IPR005294 ATP synthase, F1 complex, alpha subunit DOO79_00380 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_00380 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain DOO79_00380 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site DOO79_00380 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain DOO79_00380 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily DOO79_00385 IPR000711 ATPase, OSCP/delta subunit DOO79_00385 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily DOO79_00390 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast DOO79_00390 IPR005864 ATP synthase, F0 complex, subunit b, bacterial DOO79_00390 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily DOO79_00395 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast DOO79_00395 IPR035921 F/V-ATP synthase subunit C superfamily DOO79_00395 IPR002379 V-ATPase proteolipid subunit C-like domain DOO79_00395 IPR038662 F1F0 ATP synthase subunit C superfamily DOO79_00395 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site DOO79_00395 IPR000454 ATP synthase, F0 complex, subunit C DOO79_00400 IPR035908 ATP synthase, F0 complex, subunit A superfamily DOO79_00400 IPR023011 ATP synthase, F0 complex, subunit A, active site DOO79_00400 IPR000568 ATP synthase, F0 complex, subunit A DOO79_00420 IPR036188 FAD/NAD(P)-binding domain superfamily DOO79_00420 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site DOO79_00420 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DOO79_00420 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I DOO79_00420 IPR006258 Dihydrolipoamide dehydrogenase DOO79_00420 IPR023753 FAD/NAD(P)-binding domain DOO79_00420 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily DOO79_00430 IPR000089 Biotin/lipoyl attachment DOO79_00430 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex DOO79_00430 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain DOO79_00430 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily DOO79_00430 IPR036625 E3-binding domain superfamily DOO79_00430 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site DOO79_00430 IPR011053 Single hybrid motif DOO79_00430 IPR004167 Peripheral subunit-binding domain DOO79_00470 IPR004872 Lipoprotein NlpA family DOO79_00475 IPR035906 MetI-like superfamily DOO79_00475 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOO79_00480 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_00480 IPR018449 NIL domain DOO79_00480 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain DOO79_00480 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal DOO79_00480 IPR017871 ABC transporter, conserved site DOO79_00480 IPR003593 AAA+ ATPase domain DOO79_00480 IPR003439 ABC transporter-like DOO79_00480 IPR026253 Methionine import ATP-binding protein MetN DOO79_00485 IPR000620 EamA domain DOO79_00490 IPR036183 YajQ-like superfamily DOO79_00490 IPR007551 Protein of unknown function DUF520 DOO79_00490 IPR035571 UPF0234-like, C-terminal DOO79_00490 IPR035570 UPF0234, N-terminal DOO79_00500 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_00500 IPR011006 CheY-like superfamily DOO79_00500 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain DOO79_00500 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_00500 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOO79_00500 IPR040642 Histidine kinase receptor ArcB, transmembrane domain DOO79_00500 IPR005467 Histidine kinase domain DOO79_00500 IPR001789 Signal transduction response regulator, receiver domain DOO79_00500 IPR036641 HPT domain superfamily DOO79_00500 IPR000014 PAS domain DOO79_00500 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_00500 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB DOO79_00500 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily DOO79_00500 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_00500 IPR013767 PAS fold DOO79_00500 IPR035965 PAS domain superfamily DOO79_00500 IPR000700 PAS-associated, C-terminal DOO79_00520 IPR036291 NAD(P)-binding domain superfamily DOO79_00520 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOO79_00520 IPR002347 Short-chain dehydrogenase/reductase SDR DOO79_00525 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DOO79_00525 IPR006439 HAD hydrolase, subfamily IA DOO79_00525 IPR041492 Haloacid dehalogenase-like hydrolase DOO79_00525 IPR023214 HAD superfamily DOO79_00525 IPR036412 HAD-like superfamily DOO79_00530 IPR036986 RNA-binding S4 domain superfamily DOO79_00530 IPR006145 Pseudouridine synthase, RsuA/RluA DOO79_00530 IPR020103 Pseudouridine synthase, catalytic domain superfamily DOO79_00530 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site DOO79_00530 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F DOO79_00530 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain DOO79_00530 IPR002942 RNA-binding S4 domain DOO79_00535 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DOO79_00535 IPR013675 Methyltransferase small, N-terminal DOO79_00535 IPR023543 rRNA small subunit methyltransferase C DOO79_00535 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOO79_00535 IPR007848 Methyltransferase small domain DOO79_00555 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOO79_00555 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_00555 IPR005467 Histidine kinase domain DOO79_00555 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_00555 IPR000014 PAS domain DOO79_00555 IPR035965 PAS domain superfamily DOO79_00555 IPR013767 PAS fold DOO79_00555 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_00555 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_00575 IPR000821 Alanine racemase DOO79_00575 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal DOO79_00575 IPR001608 Alanine racemase, N-terminal DOO79_00575 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site DOO79_00575 IPR011079 Alanine racemase, C-terminal DOO79_00575 IPR029066 PLP-binding barrel DOO79_00580 IPR023080 D-amino acid dehydrogenase DadA DOO79_00580 IPR006076 FAD dependent oxidoreductase DOO79_00580 IPR036188 FAD/NAD(P)-binding domain superfamily DOO79_00585 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_00585 IPR011008 Dimeric alpha-beta barrel DOO79_00585 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DOO79_00585 IPR000485 AsnC-type HTH domain DOO79_00585 IPR011991 ArsR-like helix-turn-helix domain DOO79_00585 IPR036390 Winged helix DNA-binding domain superfamily DOO79_00585 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DOO79_00585 IPR019888 Transcription regulator AsnC-type DOO79_00605 IPR022522 Flagellar motor stator, MotA DOO79_00605 IPR002898 MotA/TolQ/ExbB proton channel DOO79_00605 IPR000540 Flagellar motor protein MotA, conserved site DOO79_00610 IPR025713 Motility protein B, N-terminal domain DOO79_00610 IPR006665 OmpA-like domain DOO79_00610 IPR036737 OmpA-like domain superfamily DOO79_00645 IPR013525 ABC-2 type transporter DOO79_00645 IPR000412 ABC-2 transporter DOO79_00655 IPR006153 Cation/H+ exchanger DOO79_00655 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria DOO79_00655 IPR038770 Sodium/solute symporter superfamily DOO79_00655 IPR018422 Cation/H+ exchanger, CPA1 family DOO79_00665 IPR000782 FAS1 domain DOO79_00665 IPR036378 FAS1 domain superfamily DOO79_00670 IPR005273 Uracil-DNA glycosylase family 4 DOO79_00670 IPR036895 Uracil-DNA glycosylase-like domain superfamily DOO79_00670 IPR005122 Uracil-DNA glycosylase-like DOO79_00680 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type DOO79_00680 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B DOO79_00695 IPR008254 Flavodoxin/nitric oxide synthase DOO79_00695 IPR005025 NADPH-dependent FMN reductase-like DOO79_00695 IPR029039 Flavoprotein-like superfamily DOO79_00700 IPR020471 Aldo/keto reductase DOO79_00700 IPR036812 NADP-dependent oxidoreductase domain superfamily DOO79_00700 IPR023210 NADP-dependent oxidoreductase domain DOO79_00710 IPR001173 Glycosyltransferase 2-like DOO79_00710 IPR029044 Nucleotide-diphospho-sugar transferases DOO79_00715 IPR000718 Peptidase M13 DOO79_00715 IPR008753 Peptidase M13, N-terminal domain DOO79_00715 IPR042089 Peptidase M13, domain 2 DOO79_00715 IPR018497 Peptidase M13, C-terminal domain DOO79_00715 IPR024079 Metallopeptidase, catalytic domain superfamily DOO79_00735 IPR002293 Amino acid/polyamine transporter I DOO79_00745 IPR007492 LytTR DNA-binding domain DOO79_00745 IPR001789 Signal transduction response regulator, receiver domain DOO79_00745 IPR011006 CheY-like superfamily DOO79_00750 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_00750 IPR033479 Double Cache domain 1 DOO79_00750 IPR005467 Histidine kinase domain DOO79_00750 IPR003660 HAMP domain DOO79_00750 IPR010559 Signal transduction histidine kinase, internal region DOO79_00750 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_00750 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_00775 IPR010287 Domain of unknown function DUF892 DOO79_00775 IPR012347 Ferritin-like DOO79_00775 IPR009078 Ferritin-like superfamily DOO79_00780 IPR007760 Manganese catalase DOO79_00780 IPR012347 Ferritin-like DOO79_00780 IPR009078 Ferritin-like superfamily DOO79_00780 IPR039377 Manganese catalase, ferritin-like di-iron-binding domain DOO79_00780 IPR027407 Manganese catalase, C-terminal DOO79_00800 IPR013656 PAS fold-4 DOO79_00800 IPR035965 PAS domain superfamily DOO79_00800 IPR000014 PAS domain DOO79_00800 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal DOO79_00800 IPR000780 MCP methyltransferase, CheR-type DOO79_00800 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal DOO79_00800 IPR035909 Methylesterase CheB, C-terminal DOO79_00800 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOO79_00800 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase DOO79_00815 IPR025944 Sigma-54 interaction domain, conserved site DOO79_00815 IPR003593 AAA+ ATPase domain DOO79_00815 IPR011006 CheY-like superfamily DOO79_00815 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DOO79_00815 IPR009057 Homeobox-like domain superfamily DOO79_00815 IPR002197 DNA binding HTH domain, Fis-type DOO79_00815 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_00815 IPR001789 Signal transduction response regulator, receiver domain DOO79_00815 IPR002078 RNA polymerase sigma factor 54 interaction domain DOO79_00815 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DOO79_00830 IPR002585 Cytochrome ubiquinol oxidase subunit 1 DOO79_00835 IPR003317 Cytochrome ubiquinol oxidase subunit 2 DOO79_00855 IPR002347 Short-chain dehydrogenase/reductase SDR DOO79_00855 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOO79_00855 IPR036291 NAD(P)-binding domain superfamily DOO79_00860 IPR005886 UDP-glucose 4-epimerase DOO79_00860 IPR036291 NAD(P)-binding domain superfamily DOO79_00860 IPR016040 NAD(P)-binding domain DOO79_00870 IPR015899 UDP-galactopyranose mutase, C-terminal DOO79_00870 IPR004379 UDP-galactopyranose mutase DOO79_00890 IPR039421 Type I protein exporter DOO79_00890 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_00890 IPR011527 ABC transporter type 1, transmembrane domain DOO79_00890 IPR036640 ABC transporter type 1, transmembrane domain superfamily DOO79_00890 IPR017871 ABC transporter, conserved site DOO79_00890 IPR003439 ABC transporter-like DOO79_00890 IPR003593 AAA+ ATPase domain DOO79_00915 IPR036291 NAD(P)-binding domain superfamily DOO79_00915 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site DOO79_00915 IPR027399 Alcohol dehydrogenase GroES-associated DOO79_00915 IPR013154 Alcohol dehydrogenase, N-terminal DOO79_00915 IPR013149 Alcohol dehydrogenase, C-terminal DOO79_00915 IPR011032 GroES-like superfamily DOO79_00960 IPR012910 TonB-dependent receptor, plug domain DOO79_00960 IPR039423 TonB-dependent receptor-like DOO79_00960 IPR010105 TonB-dependent siderophore receptor DOO79_00960 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DOO79_00960 IPR037066 TonB-dependent receptor, plug domain superfamily DOO79_00960 IPR000531 TonB-dependent receptor-like, beta-barrel DOO79_00975 IPR003593 AAA+ ATPase domain DOO79_00975 IPR017871 ABC transporter, conserved site DOO79_00975 IPR003439 ABC transporter-like DOO79_00975 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_00985 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_00985 IPR036390 Winged helix DNA-binding domain superfamily DOO79_00985 IPR005119 LysR, substrate-binding DOO79_00985 IPR000847 Transcription regulator HTH, LysR DOO79_00990 IPR038743 YjgH-like DOO79_00990 IPR006175 YjgF/YER057c/UK114 family DOO79_00990 IPR035959 RutC-like superfamily DOO79_01005 IPR004090 Chemotaxis methyl-accepting receptor DOO79_01005 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DOO79_01005 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DOO79_01005 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DOO79_01005 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DOO79_01005 IPR003660 HAMP domain DOO79_01020 IPR005119 LysR, substrate-binding DOO79_01020 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_01020 IPR000847 Transcription regulator HTH, LysR DOO79_01020 IPR036390 Winged helix DNA-binding domain superfamily DOO79_01025 IPR023048 NADH-azoreductase, FMN-dependent DOO79_01025 IPR003680 Flavodoxin-like fold DOO79_01025 IPR029039 Flavoprotein-like superfamily DOO79_01100 IPR000943 RNA polymerase sigma-70 DOO79_01100 IPR028630 RNA polymerase sigma factor RpoD DOO79_01100 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_01100 IPR014284 RNA polymerase sigma-70 like domain DOO79_01100 IPR009042 RNA polymerase sigma-70 region 1.2 DOO79_01100 IPR007627 RNA polymerase sigma-70 region 2 DOO79_01100 IPR007624 RNA polymerase sigma-70 region 3 DOO79_01100 IPR007630 RNA polymerase sigma-70 region 4 DOO79_01100 IPR007631 RNA polymerase sigma factor 70, non-essential domain DOO79_01100 IPR007127 RNA polymerase sigma factor 70, region 1.1 DOO79_01100 IPR042189 Sigma-70 factor, region 1.1 superfamily DOO79_01100 IPR013325 RNA polymerase sigma factor, region 2 DOO79_01100 IPR013324 RNA polymerase sigma factor, region 3/4-like DOO79_01100 IPR012760 RNA polymerase sigma factor RpoD, C-terminal DOO79_01105 IPR003732 D-aminoacyl-tRNA deacylase DTD DOO79_01105 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily DOO79_01110 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP DOO79_01110 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase DOO79_01110 IPR004960 Bacterial lipid A biosynthesis acyltransferase DOO79_01120 IPR016181 Acyl-CoA N-acyltransferase DOO79_01120 IPR000182 GNAT domain DOO79_01130 IPR032677 GTP cyclohydrolase II DOO79_01130 IPR000926 GTP cyclohydrolase II, RibA DOO79_01130 IPR036144 RibA-like superfamily DOO79_01150 IPR029044 Nucleotide-diphospho-sugar transferases DOO79_01150 IPR001173 Glycosyltransferase 2-like DOO79_01165 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOO79_01165 IPR004573 rRNA small subunit methyltransferase B DOO79_01165 IPR023267 RNA (C5-cytosine) methyltransferase DOO79_01165 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site DOO79_01165 IPR035926 NusB-like superfamily DOO79_01165 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type DOO79_01165 IPR006027 NusB/RsmB/TIM44 DOO79_01170 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain DOO79_01170 IPR001555 Phosphoribosylglycinamide formyltransferase, active site DOO79_01170 IPR037022 Formyl transferase, C-terminal domain superfamily DOO79_01170 IPR036477 Formyl transferase, N-terminal domain superfamily DOO79_01170 IPR002376 Formyl transferase, N-terminal DOO79_01170 IPR005793 Formyl transferase, C-terminal DOO79_01170 IPR005794 Methionyl-tRNA formyltransferase DOO79_01170 IPR011034 Formyl transferase-like, C-terminal domain superfamily DOO79_01175 IPR036821 Peptide deformylase superfamily DOO79_01175 IPR023635 Peptide deformylase DOO79_01180 IPR018392 LysM domain DOO79_01180 IPR036779 LysM domain superfamily DOO79_01185 IPR003488 DNA recombination-mediator protein A DOO79_01185 IPR041614 DprA, winged helix domain DOO79_01185 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_01190 IPR007456 Smg DOO79_01195 IPR012902 Prokaryotic N-terminal methylation site DOO79_01195 IPR001082 Fimbrial protein pilin DOO79_01205 IPR005733 DNA topoisomerase I, bacterial-type DOO79_01205 IPR028612 DNA topoisomerase I, type IA DOO79_01205 IPR025589 Topoisomerase C-terminal repeat DOO79_01205 IPR023405 DNA topoisomerase, type IA, core domain DOO79_01205 IPR034149 DNA topoisomerase 1, TOPRIM domain DOO79_01205 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 DOO79_01205 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 DOO79_01205 IPR013497 DNA topoisomerase, type IA, central DOO79_01205 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 DOO79_01205 IPR003601 DNA topoisomerase, type IA, domain 2 DOO79_01205 IPR000380 DNA topoisomerase, type IA DOO79_01205 IPR003602 DNA topoisomerase, type IA, DNA-binding domain DOO79_01205 IPR006171 TOPRIM domain DOO79_01205 IPR023406 DNA topoisomerase, type IA, active site DOO79_01210 IPR023535 Threonylcarbamoyl-AMP synthase DOO79_01210 IPR006070 YrdC-like domain DOO79_01210 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DOO79_01225 IPR002347 Short-chain dehydrogenase/reductase SDR DOO79_01225 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOO79_01225 IPR036291 NAD(P)-binding domain superfamily DOO79_01240 IPR004634 Peptidase S49, protease IV DOO79_01240 IPR029045 ClpP/crotonase-like domain superfamily DOO79_01240 IPR002142 Peptidase S49 DOO79_01240 IPR033854 Signal peptide peptidase A DOO79_01240 IPR004635 Peptidase S49, SppA DOO79_01245 IPR002528 Multi antimicrobial extrusion protein DOO79_01265 IPR001650 Helicase, C-terminal DOO79_01265 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOO79_01265 IPR041222 Primosomal protein N', 3' DNA-binding domain DOO79_01265 IPR011545 DEAD/DEAH box helicase domain DOO79_01265 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_01265 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain DOO79_01265 IPR041236 Primosomal protein N, C-terminal domain DOO79_01265 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily DOO79_01265 IPR005259 Primosomal protein N' DOO79_01270 IPR010987 Glutathione S-transferase, C-terminal-like DOO79_01270 IPR004046 Glutathione S-transferase, C-terminal DOO79_01270 IPR036249 Thioredoxin-like superfamily DOO79_01270 IPR004045 Glutathione S-transferase, N-terminal DOO79_01270 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DOO79_01285 IPR036188 FAD/NAD(P)-binding domain superfamily DOO79_01285 IPR023753 FAD/NAD(P)-binding domain DOO79_01295 IPR014284 RNA polymerase sigma-70 like domain DOO79_01295 IPR000943 RNA polymerase sigma-70 DOO79_01295 IPR007627 RNA polymerase sigma-70 region 2 DOO79_01295 IPR007630 RNA polymerase sigma-70 region 4 DOO79_01295 IPR013325 RNA polymerase sigma factor, region 2 DOO79_01295 IPR013324 RNA polymerase sigma factor, region 3/4-like DOO79_01295 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria DOO79_01295 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_01300 IPR018085 Uracil-DNA glycosylase, active site DOO79_01300 IPR002043 Uracil-DNA glycosylase family 1 DOO79_01300 IPR036895 Uracil-DNA glycosylase-like domain superfamily DOO79_01300 IPR005122 Uracil-DNA glycosylase-like DOO79_01305 IPR001789 Signal transduction response regulator, receiver domain DOO79_01305 IPR037522 HD-GYP domain DOO79_01305 IPR011006 CheY-like superfamily DOO79_01305 IPR003607 HD/PDEase domain DOO79_01310 IPR040690 FtsX, extracellular domain DOO79_01310 IPR004513 Cell division protein FtsX DOO79_01315 IPR017871 ABC transporter, conserved site DOO79_01315 IPR003439 ABC transporter-like DOO79_01315 IPR005286 Cell division protein FtsE, ATP-binding DOO79_01315 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_01315 IPR003593 AAA+ ATPase domain DOO79_01320 IPR014014 RNA helicase, DEAD-box type, Q motif DOO79_01320 IPR011545 DEAD/DEAH box helicase domain DOO79_01320 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOO79_01320 IPR001650 Helicase, C-terminal DOO79_01320 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_01320 IPR023554 ATP-dependent RNA helicase RhlB type DOO79_01320 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DOO79_01320 IPR022077 ATP-dependent RNA helicase RhlB DOO79_01325 IPR013766 Thioredoxin domain DOO79_01325 IPR036249 Thioredoxin-like superfamily DOO79_01325 IPR017937 Thioredoxin, conserved site DOO79_01325 IPR005746 Thioredoxin DOO79_01330 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_01330 IPR011112 Rho termination factor, N-terminal DOO79_01330 IPR011113 Rho termination factor, RNA-binding domain DOO79_01330 IPR004665 Transcription termination factor Rho DOO79_01330 IPR012340 Nucleic acid-binding, OB-fold DOO79_01330 IPR041703 Transcription termination factor Rho, ATP binding domain DOO79_01330 IPR011129 Cold shock domain DOO79_01330 IPR003593 AAA+ ATPase domain DOO79_01330 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain DOO79_01335 IPR010452 Isocitrate dehydrogenase kinasephosphatase DOO79_01340 IPR005119 LysR, substrate-binding DOO79_01340 IPR000847 Transcription regulator HTH, LysR DOO79_01340 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_01340 IPR036390 Winged helix DNA-binding domain superfamily DOO79_01350 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric DOO79_01365 IPR021124 CRISPR-associated protein, Cas5 DOO79_01365 IPR010155 CRISPR pre-crRNA endoribonuclease Cas5d DOO79_01365 IPR013422 CRISPR-associated protein Cas5, N-terminal DOO79_01385 IPR042211 CRISPR-associated endonuclease Cas1, N-terminal domain DOO79_01385 IPR019856 CRISPR-associated protein Cas1, DVULG subtype DOO79_01385 IPR002729 CRISPR-associated protein Cas1 DOO79_01385 IPR042206 CRISPR-associated endonuclease Cas1, C-terminal domain DOO79_01390 IPR021127 CRISPR-associated endonuclease Cas2 DOO79_01390 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 DOO79_01400 IPR007055 BON domain DOO79_01400 IPR018392 LysM domain DOO79_01400 IPR036779 LysM domain superfamily DOO79_01400 IPR014004 Transport-associated and nodulation domain, bacteria DOO79_01405 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 DOO79_01405 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF DOO79_01405 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal DOO79_01410 IPR011650 Peptidase M20, dimerisation domain DOO79_01410 IPR002933 Peptidase M20 DOO79_01410 IPR017439 Amidohydrolase DOO79_01410 IPR036264 Bacterial exopeptidase dimerisation domain DOO79_01415 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DOO79_01415 IPR022824 Multidrug resistance protein MdtA DOO79_01415 IPR006143 RND efflux pump, membrane fusion protein DOO79_01420 IPR001036 Acriflavin resistance protein DOO79_01420 IPR022831 Multidrug resistance protein MdtB DOO79_01420 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DOO79_01425 IPR023931 Multidrug resistance protein MdtC DOO79_01425 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DOO79_01425 IPR001036 Acriflavin resistance protein DOO79_01430 IPR009770 Domain of unknown function DUF1338 DOO79_01485 IPR000755 D-alanyl-D-alanine dipeptidase DOO79_01485 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily DOO79_01490 IPR002502 N-acetylmuramoyl-L-alanine amidase domain DOO79_01490 IPR036366 PGBD superfamily DOO79_01490 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily DOO79_01490 IPR036365 PGBD-like superfamily DOO79_01500 IPR036849 Enolase-like, C-terminal domain superfamily DOO79_01500 IPR029017 Enolase-like, N-terminal DOO79_01500 IPR034603 Dipeptide epimerase DOO79_01500 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain DOO79_01500 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DOO79_01500 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site DOO79_01500 IPR029065 Enolase C-terminal domain-like DOO79_01510 IPR004754 Amino acid antiporter DOO79_01510 IPR002293 Amino acid/polyamine transporter I DOO79_01525 IPR038972 Inner membrane protein YiaA-like DOO79_01525 IPR008024 YiaAB two helix DOO79_01530 IPR012938 Glucose/Sorbosone dehydrogenase DOO79_01530 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase DOO79_01530 IPR011042 Six-bladed beta-propeller, TolB-like DOO79_01535 IPR013783 Immunoglobulin-like fold DOO79_01535 IPR017853 Glycoside hydrolase superfamily DOO79_01535 IPR001764 Glycoside hydrolase, family 3, N-terminal DOO79_01535 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily DOO79_01535 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily DOO79_01535 IPR026891 Fibronectin type III-like domain DOO79_01535 IPR019800 Glycoside hydrolase, family 3, active site DOO79_01535 IPR002772 Glycoside hydrolase family 3 C-terminal domain DOO79_01540 IPR006156 Dihydroneopterin aldolase DOO79_01540 IPR006157 Dihydroneopterin aldolase/epimerase domain DOO79_01545 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD DOO79_01545 IPR017860 Peptidase M22, conserved site DOO79_01545 IPR017861 Kae1/TsaD family DOO79_01545 IPR000905 Gcp-like domain DOO79_01550 IPR038380 Ribosomal protein S21 superfamily DOO79_01550 IPR001911 Ribosomal protein S21 DOO79_01550 IPR018278 Ribosomal protein S21, conserved site DOO79_01555 IPR042184 YqeY/Aim41, N-terminal domain DOO79_01555 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 DOO79_01555 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like DOO79_01555 IPR019004 Uncharacterised protein YqeY/Aim41 DOO79_01565 IPR023679 Uncharacterised protein family UPF0761, bacterial DOO79_01565 IPR017039 Virulence factor BrkB DOO79_01570 IPR036977 DNA Primase, CHC2-type zinc finger DOO79_01570 IPR019475 DNA primase, DnaB-helicase binding domain DOO79_01570 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily DOO79_01570 IPR013264 DNA primase, catalytic core, N-terminal DOO79_01570 IPR034151 Bacterial DnaG primase, TOPRIM domain DOO79_01570 IPR030846 DNA primase DnaG, bacteria DOO79_01570 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal DOO79_01570 IPR013173 DNA primase DnaG, DnaB-binding domain DOO79_01570 IPR006295 DNA primase, DnaG DOO79_01570 IPR006171 TOPRIM domain DOO79_01570 IPR002694 Zinc finger, CHC2-type DOO79_01575 IPR016833 Putative sodium bile acid cotransporter DOO79_01575 IPR038770 Sodium/solute symporter superfamily DOO79_01585 IPR000537 UbiA prenyltransferase family DOO79_01585 IPR030470 UbiA prenyltransferase conserved site DOO79_01585 IPR006369 Protohaem IX farnesyltransferase DOO79_01610 IPR024791 Cytochrome c oxidase subunit III DOO79_01610 IPR033945 Cytochrome c oxidase subunit III domain DOO79_01610 IPR000298 Cytochrome c oxidase subunit III-like DOO79_01610 IPR035973 Cytochrome c oxidase subunit III-like superfamily DOO79_01610 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle DOO79_01615 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 DOO79_01615 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily DOO79_01625 IPR023616 Cytochrome c oxidase-like, subunit I domain DOO79_01625 IPR000883 Cytochrome c oxidase subunit I DOO79_01625 IPR036927 Cytochrome c oxidase-like, subunit I superfamily DOO79_01625 IPR033944 Cytochrome c oxidase subunit I domain DOO79_01625 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site DOO79_01625 IPR014241 Cytochrome c oxidase, subunit I bacterial type DOO79_01630 IPR014222 Cytochrome c oxidase, subunit II DOO79_01630 IPR034210 Cytochrome c oxidase subunit 2, C-terminal DOO79_01630 IPR002429 Cytochrome c oxidase subunit II-like C-terminal DOO79_01630 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain DOO79_01630 IPR001505 Copper centre Cu(A) DOO79_01630 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily DOO79_01630 IPR005728 Rickettsial palindromic element DOO79_01630 IPR008972 Cupredoxin DOO79_01640 IPR016162 Aldehyde dehydrogenase, N-terminal DOO79_01640 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DOO79_01640 IPR016160 Aldehyde dehydrogenase, cysteine active site DOO79_01640 IPR013321 Arc-type ribbon-helix-helix DOO79_01640 IPR025703 Bifunctional protein PutA DOO79_01640 IPR016163 Aldehyde dehydrogenase, C-terminal DOO79_01640 IPR016161 Aldehyde/histidinol dehydrogenase DOO79_01640 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 DOO79_01640 IPR015590 Aldehyde dehydrogenase domain DOO79_01640 IPR029041 FAD-linked oxidoreductase-like DOO79_01640 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain DOO79_01640 IPR024090 Proline dehydrogenase PutA, domain I DOO79_01640 IPR024089 Proline dehydrogenase PutA, domain I/II DOO79_01640 IPR024082 Proline dehydrogenase PutA, domain II DOO79_01640 IPR002872 Proline dehydrogenase domain DOO79_01640 IPR010985 Ribbon-helix-helix DOO79_01670 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 DOO79_01670 IPR002307 Tyrosine-tRNA ligase DOO79_01670 IPR036986 RNA-binding S4 domain superfamily DOO79_01670 IPR024088 Tyrosine-tRNA ligase, bacterial-type DOO79_01670 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOO79_01670 IPR002305 Aminoacyl-tRNA synthetase, class Ic DOO79_01670 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DOO79_01670 IPR002942 RNA-binding S4 domain DOO79_01675 IPR016047 Peptidase M23 DOO79_01675 IPR007340 Opacity-associated protein A DOO79_01675 IPR011055 Duplicated hybrid motif DOO79_01680 IPR005338 Anhydro-N-acetylmuramic acid kinase DOO79_01690 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 DOO79_01690 IPR036259 MFS transporter superfamily DOO79_01690 IPR020846 Major facilitator superfamily domain DOO79_01690 IPR011701 Major facilitator superfamily DOO79_01695 IPR020848 AP endonuclease 1, conserved site DOO79_01695 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DOO79_01695 IPR004808 AP endonuclease 1 DOO79_01695 IPR005135 Endonuclease/exonuclease/phosphatase DOO79_01695 IPR020847 AP endonuclease 1, binding site DOO79_01700 IPR029057 Phosphoribosyltransferase-like DOO79_01700 IPR000836 Phosphoribosyltransferase domain DOO79_01700 IPR004467 Orotate phosphoribosyl transferase domain DOO79_01700 IPR023031 Orotate phosphoribosyltransferase DOO79_01710 IPR025669 AAA domain DOO79_01710 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_01715 IPR036086 ParB/Sulfiredoxin superfamily DOO79_01715 IPR003115 ParB/Sulfiredoxin DOO79_01715 IPR004437 ParB/RepB/Spo0J partition protein DOO79_01715 IPR041468 ParB/Spo0J, HTH domain DOO79_01730 IPR036291 NAD(P)-binding domain superfamily DOO79_01730 IPR001509 NAD-dependent epimerase/dehydratase DOO79_01735 IPR001173 Glycosyltransferase 2-like DOO79_01735 IPR029044 Nucleotide-diphospho-sugar transferases DOO79_01750 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II DOO79_01750 IPR016066 Alpha-D-phosphohexomutase, conserved site DOO79_01750 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily DOO79_01750 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III DOO79_01750 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III DOO79_01750 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I DOO79_01750 IPR005841 Alpha-D-phosphohexomutase superfamily DOO79_01750 IPR005843 Alpha-D-phosphohexomutase, C-terminal DOO79_01755 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase DOO79_01755 IPR036157 dUTPase-like superfamily DOO79_01755 IPR029054 dUTPase-like DOO79_01755 IPR033704 dUTPase, trimeric DOO79_01760 IPR003382 Flavoprotein DOO79_01760 IPR035929 CoaB-like superfamily DOO79_01760 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC DOO79_01760 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal DOO79_01760 IPR036551 Flavin prenyltransferase-like DOO79_01765 IPR037518 MPN domain DOO79_01765 IPR010994 RuvA domain 2-like DOO79_01765 IPR020891 Uncharacterised protein family UPF0758, conserved site DOO79_01765 IPR001405 Uncharacterised protein family UPF0758 DOO79_01765 IPR025657 RadC-like JAB domain DOO79_01770 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DOO79_01770 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily DOO79_01770 IPR008909 DALR anticodon binding DOO79_01770 IPR035684 Arginyl-tRNA synthetase, catalytic core domain DOO79_01770 IPR005148 Arginyl tRNA synthetase N-terminal domain DOO79_01770 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOO79_01770 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding DOO79_01770 IPR001278 Arginine-tRNA ligase DOO79_01785 IPR036291 NAD(P)-binding domain superfamily DOO79_01785 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOO79_01785 IPR002347 Short-chain dehydrogenase/reductase SDR DOO79_01790 IPR036514 SGNH hydrolase superfamily DOO79_01790 IPR002656 Acyltransferase 3 DOO79_01800 IPR020845 AMP-binding, conserved site DOO79_01800 IPR025110 AMP-binding enzyme, C-terminal domain DOO79_01800 IPR036736 ACP-like superfamily DOO79_01800 IPR029058 Alpha/Beta hydrolase fold DOO79_01800 IPR010071 Amino acid adenylation domain DOO79_01800 IPR001242 Condensation domain DOO79_01800 IPR000873 AMP-dependent synthetase/ligase DOO79_01800 IPR020806 Polyketide synthase, phosphopantetheine-binding domain DOO79_01800 IPR009081 Phosphopantetheine binding ACP domain DOO79_01800 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily DOO79_01800 IPR042099 AMP-dependent synthetase-like superfamily DOO79_01800 IPR020802 Polyketide synthase, thioesterase domain DOO79_01800 IPR001031 Thioesterase DOO79_01805 IPR002985 Arginine decarboxylase DOO79_01805 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site DOO79_01805 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal DOO79_01805 IPR029066 PLP-binding barrel DOO79_01805 IPR040634 Arginine decarboxylase, helical bundle domain DOO79_01805 IPR041128 Arginine decarboxylase, C-terminal helical DOO79_01805 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal DOO79_01805 IPR000183 Ornithine/DAP/Arg decarboxylase DOO79_01810 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOO79_01810 IPR030374 Polyamine biosynthesis domain DOO79_01810 IPR035246 Spermidine synthase, tetramerisation domain DOO79_01810 IPR037163 Spermidine synthase, tetramerisation domain superfamily DOO79_01810 IPR030373 Polyamine biosynthesis domain, conserved site DOO79_01810 IPR001045 Spermidine/spermine synthases DOO79_01855 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DOO79_01855 IPR002332 Nitrogen regulatory protein P-II, urydylation site DOO79_01855 IPR017918 Nitrogen regulatory protein PII, conserved site DOO79_01855 IPR011322 Nitrogen regulatory PII-like, alpha/beta DOO79_01855 IPR002187 Nitrogen regulatory protein PII DOO79_01860 IPR007475 Ubiquinone biosynthesis accessory factor UbiK DOO79_01865 IPR020568 Ribosomal protein S5 domain 2-type fold DOO79_01865 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_01865 IPR000523 Magnesium chelatase ChlI domain DOO79_01865 IPR025158 Mg chelatase-related protein, C-terminal domain DOO79_01865 IPR004482 Mg chelatase-related protein DOO79_01865 IPR001208 MCM domain DOO79_01865 IPR003593 AAA+ ATPase domain DOO79_01865 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOO79_01880 IPR035919 EAL domain superfamily DOO79_01880 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain DOO79_01880 IPR001633 EAL domain DOO79_01885 IPR005804 Fatty acid desaturase domain DOO79_01890 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DOO79_01890 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase DOO79_01890 IPR017927 FAD-binding domain, ferredoxin reductase-type DOO79_01890 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain DOO79_01890 IPR012675 Beta-grasp domain superfamily DOO79_01890 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site DOO79_01890 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain DOO79_01890 IPR036010 2Fe-2S ferredoxin-like superfamily DOO79_01890 IPR001433 Oxidoreductase FAD/NAD(P)-binding DOO79_01890 IPR017938 Riboflavin synthase-like beta-barrel DOO79_01895 IPR009057 Homeobox-like domain superfamily DOO79_01895 IPR001647 DNA-binding HTH domain, TetR-type DOO79_01895 IPR023764 Transcriptional repressor HTH, FabR DOO79_01915 IPR036025 tRNA-splicing ligase RtcB-like superfamily DOO79_01915 IPR001233 tRNA-splicing ligase, RtcB DOO79_01950 IPR010099 Epimerase family protein SDR39U1 DOO79_01950 IPR036291 NAD(P)-binding domain superfamily DOO79_01950 IPR001509 NAD-dependent epimerase/dehydratase DOO79_01950 IPR013549 Domain of unknown function DUF1731 DOO79_01955 IPR039420 Transcriptional regulatory protein WalR-like DOO79_01955 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_01955 IPR011006 CheY-like superfamily DOO79_01955 IPR001867 OmpR/PhoB-type DNA-binding domain DOO79_01955 IPR001789 Signal transduction response regulator, receiver domain DOO79_01960 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOO79_01960 IPR013727 Two-component sensor kinase, N-terminal DOO79_01960 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_01960 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_01960 IPR005467 Histidine kinase domain DOO79_01960 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_01960 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_01990 IPR009003 Peptidase S1, PA clan DOO79_01990 IPR011782 Peptidase S1C, Do DOO79_01990 IPR036034 PDZ superfamily DOO79_01990 IPR001478 PDZ domain DOO79_01990 IPR001940 Peptidase S1C DOO79_02010 IPR002549 Transmembrane protein TqsA-like DOO79_02015 IPR010972 Beta-phosphoglucomutase DOO79_02015 IPR036412 HAD-like superfamily DOO79_02015 IPR006439 HAD hydrolase, subfamily IA DOO79_02015 IPR041492 Haloacid dehalogenase-like hydrolase DOO79_02015 IPR023214 HAD superfamily DOO79_02015 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DOO79_02015 IPR010976 Beta-phosphoglucomutase hydrolase DOO79_02020 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal DOO79_02020 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B DOO79_02020 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal DOO79_02020 IPR023042 Peptidase M17, leucine aminopeptidase DOO79_02035 IPR020835 Catalase superfamily DOO79_02035 IPR018028 Catalase, mono-functional, haem-containing DOO79_02035 IPR011614 Catalase core domain DOO79_02035 IPR024168 Catalase, SrpA-type, predicted DOO79_02060 IPR016032 Signal transduction response regulator, C-terminal effector DOO79_02060 IPR001789 Signal transduction response regulator, receiver domain DOO79_02060 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_02060 IPR011006 CheY-like superfamily DOO79_02060 IPR000792 Transcription regulator LuxR, C-terminal DOO79_02065 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain DOO79_02065 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_02070 IPR022824 Multidrug resistance protein MdtA DOO79_02070 IPR039562 Membrane fusion protein, biotin-lipoyl like domain DOO79_02070 IPR006143 RND efflux pump, membrane fusion protein DOO79_02075 IPR003593 AAA+ ATPase domain DOO79_02075 IPR017871 ABC transporter, conserved site DOO79_02075 IPR003439 ABC transporter-like DOO79_02075 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_02095 IPR004626 RarD protein DOO79_02095 IPR000620 EamA domain DOO79_02100 IPR004779 Carboxylate/Amino Acid/Amine Transporter DOO79_02100 IPR000620 EamA domain DOO79_02120 IPR001279 Metallo-beta-lactamase DOO79_02120 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOO79_02125 IPR036913 YegP-like superfamily DOO79_02125 IPR024109 Tryptophan-tRNA ligase, bacterial-type DOO79_02125 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOO79_02125 IPR002305 Aminoacyl-tRNA synthetase, class Ic DOO79_02125 IPR002306 Tryptophan-tRNA ligase DOO79_02130 IPR036629 YjbJ superfamily DOO79_02130 IPR008462 CsbD-like domain DOO79_02130 IPR026042 Stress response protein YjbJ DOO79_02145 IPR014033 Arginase DOO79_02145 IPR006035 Ureohydrolase DOO79_02145 IPR023696 Ureohydrolase domain superfamily DOO79_02145 IPR020855 Ureohydrolase, manganese-binding site DOO79_02175 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_02175 IPR018094 Thymidylate kinase DOO79_02175 IPR039430 Thymidylate kinase-like domain DOO79_02225 IPR004619 Type III pantothenate kinase DOO79_02230 IPR008988 Transcriptional repressor, C-terminal DOO79_02230 IPR013196 Helix-turn-helix, type 11 DOO79_02230 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain DOO79_02230 IPR003142 Biotin protein ligase, C-terminal DOO79_02230 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_02230 IPR036390 Winged helix DNA-binding domain superfamily DOO79_02230 IPR004408 Biotin--acetyl-CoA-carboxylase ligase DOO79_02230 IPR030855 Bifunctional ligase/repressor BirA DOO79_02230 IPR004409 Biotin operon repressor, helix-turn-helix domain DOO79_02245 IPR024079 Metallopeptidase, catalytic domain superfamily DOO79_02245 IPR010384 MtfA family DOO79_02245 IPR042252 MtfA, N-terminal DOO79_02260 IPR005467 Histidine kinase domain DOO79_02260 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_02260 IPR003660 HAMP domain DOO79_02260 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_02260 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_02260 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOO79_02260 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_02265 IPR011006 CheY-like superfamily DOO79_02265 IPR001789 Signal transduction response regulator, receiver domain DOO79_02265 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_02265 IPR001867 OmpR/PhoB-type DNA-binding domain DOO79_02265 IPR039420 Transcriptional regulatory protein WalR-like DOO79_02275 IPR018517 tRNA-dihydrouridine synthase, conserved site DOO79_02275 IPR013785 Aldolase-type TIM barrel DOO79_02275 IPR035587 DUS-like, FMN-binding domain DOO79_02275 IPR004653 tRNA-dihydrouridine(20/20a) synthase DOO79_02275 IPR001269 tRNA-dihydrouridine synthase DOO79_02295 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 DOO79_02295 IPR024708 Catalase active site DOO79_02295 IPR011614 Catalase core domain DOO79_02295 IPR020835 Catalase superfamily DOO79_02295 IPR010582 Catalase immune-responsive domain DOO79_02295 IPR002226 Catalase haem-binding site DOO79_02295 IPR037060 Catalase core domain superfamily DOO79_02295 IPR018028 Catalase, mono-functional, haem-containing DOO79_02305 IPR039000 ATP-dependent DNA helicase DinG DOO79_02305 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_02305 IPR001650 Helicase, C-terminal DOO79_02305 IPR006555 ATP-dependent helicase, C-terminal DOO79_02305 IPR010614 DEAD2 DOO79_02305 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type DOO79_02320 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase DOO79_02320 IPR022893 Shikimate dehydrogenase family DOO79_02320 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal DOO79_02320 IPR011342 Shikimate dehydrogenase DOO79_02320 IPR036291 NAD(P)-binding domain superfamily DOO79_02320 IPR041121 SDH, C-terminal DOO79_02330 IPR017927 FAD-binding domain, ferredoxin reductase-type DOO79_02330 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding DOO79_02330 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria DOO79_02330 IPR001094 Flavodoxin-like DOO79_02330 IPR008254 Flavodoxin/nitric oxide synthase DOO79_02330 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase DOO79_02330 IPR029039 Flavoprotein-like superfamily DOO79_02330 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily DOO79_02330 IPR001433 Oxidoreductase FAD/NAD(P)-binding DOO79_02330 IPR017938 Riboflavin synthase-like beta-barrel DOO79_02330 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain DOO79_02330 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DOO79_02340 IPR000847 Transcription regulator HTH, LysR DOO79_02340 IPR005119 LysR, substrate-binding DOO79_02340 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_02340 IPR036390 Winged helix DNA-binding domain superfamily DOO79_02355 IPR013785 Aldolase-type TIM barrel DOO79_02355 IPR030656 Delta-aminolevulinic acid dehydratase, active site DOO79_02355 IPR001731 Delta-aminolevulinic acid dehydratase DOO79_02380 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily DOO79_02380 IPR002469 Dipeptidylpeptidase IV, N-terminal domain DOO79_02380 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain DOO79_02380 IPR029058 Alpha/Beta hydrolase fold DOO79_02385 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DOO79_02385 IPR036249 Thioredoxin-like superfamily DOO79_02385 IPR010987 Glutathione S-transferase, C-terminal-like DOO79_02385 IPR004046 Glutathione S-transferase, C-terminal DOO79_02385 IPR004045 Glutathione S-transferase, N-terminal DOO79_02425 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_02425 IPR003593 AAA+ ATPase domain DOO79_02425 IPR003439 ABC transporter-like DOO79_02425 IPR017871 ABC transporter, conserved site DOO79_02435 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOO79_02435 IPR001387 Cro/C1-type helix-turn-helix domain DOO79_02445 IPR000514 Glycoside hydrolase, family 39 DOO79_02445 IPR017853 Glycoside hydrolase superfamily DOO79_02450 IPR003735 Metal-sensitive transcriptional repressor DOO79_02450 IPR038390 Metal-sensitive transcriptional repressor superfamily DOO79_02455 IPR027469 Cation efflux transmembrane domain superfamily DOO79_02455 IPR036837 Cation efflux protein, cytoplasmic domain superfamily DOO79_02455 IPR002524 Cation efflux protein DOO79_02455 IPR027470 Cation efflux protein, cytoplasmic domain DOO79_02465 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DOO79_02465 IPR012910 TonB-dependent receptor, plug domain DOO79_02465 IPR037066 TonB-dependent receptor, plug domain superfamily DOO79_02465 IPR039423 TonB-dependent receptor-like DOO79_02465 IPR010105 TonB-dependent siderophore receptor DOO79_02465 IPR000531 TonB-dependent receptor-like, beta-barrel DOO79_02475 IPR002818 DJ-1/PfpI DOO79_02475 IPR009057 Homeobox-like domain superfamily DOO79_02475 IPR029062 Class I glutamine amidotransferase-like DOO79_02475 IPR018062 HTH domain AraC-type, conserved site DOO79_02475 IPR018060 DNA binding HTH domain, AraC-type DOO79_02480 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase DOO79_02480 IPR017927 FAD-binding domain, ferredoxin reductase-type DOO79_02480 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain DOO79_02480 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site DOO79_02480 IPR012675 Beta-grasp domain superfamily DOO79_02480 IPR036010 2Fe-2S ferredoxin-like superfamily DOO79_02480 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain DOO79_02480 IPR017938 Riboflavin synthase-like beta-barrel DOO79_02480 IPR001433 Oxidoreductase FAD/NAD(P)-binding DOO79_02480 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DOO79_02485 IPR003593 AAA+ ATPase domain DOO79_02485 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_02485 IPR017871 ABC transporter, conserved site DOO79_02485 IPR003439 ABC transporter-like DOO79_02490 IPR000412 ABC-2 transporter DOO79_02490 IPR013525 ABC-2 type transporter DOO79_02500 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOO79_02500 IPR036291 NAD(P)-binding domain superfamily DOO79_02500 IPR013332 Ketopantoate reductase, N-terminal domain DOO79_02500 IPR013752 Ketopantoate reductase, C-terminal domain DOO79_02500 IPR003710 Ketopantoate reductase ApbA/PanE DOO79_02500 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DOO79_02535 IPR009078 Ferritin-like superfamily DOO79_02535 IPR000358 Ribonucleotide reductase small subunit family DOO79_02535 IPR033909 Ribonucleotide reductase small subunit DOO79_02535 IPR012348 Ribonucleotide reductase-like DOO79_02545 IPR039718 Ribonucleoside-diphosphate reductase large subunit DOO79_02545 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal DOO79_02545 IPR013509 Ribonucleotide reductase large subunit, N-terminal DOO79_02545 IPR000788 Ribonucleotide reductase large subunit, C-terminal DOO79_02545 IPR005144 ATP-cone domain DOO79_02545 IPR013346 Ribonucleotide reductase, class I , alpha subunit DOO79_02560 IPR016181 Acyl-CoA N-acyltransferase DOO79_02560 IPR011761 ATP-grasp fold DOO79_02560 IPR013815 ATP-grasp fold, subdomain 1 DOO79_02560 IPR003781 CoA-binding DOO79_02560 IPR000182 GNAT domain DOO79_02560 IPR036291 NAD(P)-binding domain superfamily DOO79_02560 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain DOO79_02560 IPR016102 Succinyl-CoA synthetase-like DOO79_02565 IPR000644 CBS domain DOO79_02565 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily DOO79_02565 IPR006667 SLC41 divalent cation transporters, integral membrane domain DOO79_02565 IPR006669 Magnesium transporter MgtE DOO79_02565 IPR038048 Magnesium transporter MgtE, transmembrane domain DOO79_02565 IPR038076 MgtE, N-terminal domain superfamily DOO79_02565 IPR006668 Magnesium transporter, MgtE intracellular domain DOO79_02570 IPR036398 Alpha carbonic anhydrase domain superfamily DOO79_02570 IPR023561 Carbonic anhydrase, alpha-class DOO79_02570 IPR001148 Alpha carbonic anhydrase domain DOO79_02570 IPR041891 Carbonic anhydrase, prokaryotic-like DOO79_02570 IPR018338 Carbonic anhydrase, alpha-class, conserved site DOO79_02575 IPR020884 Glutathione-regulated potassium-efflux system protein KefB DOO79_02575 IPR038770 Sodium/solute symporter superfamily DOO79_02575 IPR036291 NAD(P)-binding domain superfamily DOO79_02575 IPR003148 Regulator of K+ conductance, N-terminal DOO79_02575 IPR006153 Cation/H+ exchanger DOO79_02575 IPR004771 K+/H+ exchanger DOO79_02585 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal DOO79_02585 IPR001282 Glucose-6-phosphate dehydrogenase DOO79_02585 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding DOO79_02585 IPR019796 Glucose-6-phosphate dehydrogenase, active site DOO79_02585 IPR036291 NAD(P)-binding domain superfamily DOO79_02590 IPR008928 Six-hairpin glycosidase superfamily DOO79_02590 IPR011613 GH15-like domain DOO79_02590 IPR012341 Six-hairpin glycosidase-like superfamily DOO79_02605 IPR027354 YcgL domain DOO79_02605 IPR038068 YcgL-like superfamily DOO79_02610 IPR000794 Beta-ketoacyl synthase DOO79_02610 IPR018201 Beta-ketoacyl synthase, active site DOO79_02610 IPR014031 Beta-ketoacyl synthase, C-terminal DOO79_02610 IPR014030 Beta-ketoacyl synthase, N-terminal DOO79_02610 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DOO79_02610 IPR016039 Thiolase-like DOO79_02610 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 DOO79_02620 IPR039528 DPM1-like DOO79_02620 IPR029044 Nucleotide-diphospho-sugar transferases DOO79_02620 IPR001173 Glycosyltransferase 2-like DOO79_02630 IPR036291 NAD(P)-binding domain superfamily DOO79_02630 IPR002347 Short-chain dehydrogenase/reductase SDR DOO79_02630 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase DOO79_02630 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOO79_02670 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ DOO79_02670 IPR029069 HotDog domain superfamily DOO79_02670 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ DOO79_02675 IPR002123 Phospholipid/glycerol acyltransferase DOO79_02675 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase DOO79_02685 IPR003231 Acyl carrier protein (ACP) DOO79_02685 IPR036736 ACP-like superfamily DOO79_02685 IPR006162 Phosphopantetheine attachment site DOO79_02685 IPR009081 Phosphopantetheine binding ACP domain DOO79_02690 IPR036188 FAD/NAD(P)-binding domain superfamily DOO79_02690 IPR006905 Flavin-dependent halogenase DOO79_02695 IPR035959 RutC-like superfamily DOO79_02695 IPR031038 Chorismatase, FkbO/Hyg5 family DOO79_02715 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain DOO79_02715 IPR011659 WD40-like Beta Propeller DOO79_02715 IPR011042 Six-bladed beta-propeller, TolB-like DOO79_02715 IPR029058 Alpha/Beta hydrolase fold DOO79_02735 IPR001260 Coproporphyrinogen III oxidase, aerobic DOO79_02735 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily DOO79_02735 IPR018375 Coproporphyrinogen III oxidase, conserved site DOO79_02745 IPR029060 PIN-like domain superfamily DOO79_02745 IPR012337 Ribonuclease H-like superfamily DOO79_02745 IPR020045 DNA polymerase I-like, H3TH domain DOO79_02745 IPR018320 DNA polymerase 1 DOO79_02745 IPR001098 DNA-directed DNA polymerase, family A, palm domain DOO79_02745 IPR036397 Ribonuclease H superfamily DOO79_02745 IPR036279 5'-3' exonuclease, C-terminal domain superfamily DOO79_02745 IPR002421 5'-3' exonuclease, N-terminal DOO79_02745 IPR019760 DNA-directed DNA polymerase, family A, conserved site DOO79_02745 IPR002298 DNA polymerase A DOO79_02745 IPR002562 3'-5' exonuclease domain DOO79_02745 IPR008918 Helix-hairpin-helix motif, class 2 DOO79_02745 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal DOO79_02780 IPR015655 Protein phosphatase 2C family DOO79_02780 IPR036457 PPM-type phosphatase domain superfamily DOO79_02780 IPR001932 PPM-type phosphatase domain DOO79_02815 IPR006531 Gp5 N-terminal DOO79_02815 IPR037026 Vgr protein, OB-fold domain superfamily DOO79_02815 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein DOO79_02815 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset DOO79_02830 IPR017441 Protein kinase, ATP binding site DOO79_02830 IPR011009 Protein kinase-like domain superfamily DOO79_02830 IPR005543 PASTA domain DOO79_02830 IPR000719 Protein kinase domain DOO79_02830 IPR008271 Serine/threonine-protein kinase, active site DOO79_02840 IPR013325 RNA polymerase sigma factor, region 2 DOO79_02840 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 DOO79_02840 IPR007627 RNA polymerase sigma-70 region 2 DOO79_02840 IPR014284 RNA polymerase sigma-70 like domain DOO79_02840 IPR013324 RNA polymerase sigma factor, region 3/4-like DOO79_02840 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_02840 IPR039425 RNA polymerase sigma-70 like DOO79_02860 IPR029033 Histidine phosphatase superfamily DOO79_02860 IPR000560 Histidine phosphatase superfamily, clade-2 DOO79_02860 IPR033379 Histidine acid phosphatase active site DOO79_02930 IPR008514 Type VI secretion system effector, Hcp DOO79_02930 IPR036624 Hcp1-like superfamily DOO79_02965 IPR001451 Hexapeptide repeat DOO79_02965 IPR018357 Hexapeptide transferase, conserved site DOO79_02965 IPR024688 Maltose/galactoside acetyltransferase DOO79_02965 IPR011004 Trimeric LpxA-like superfamily DOO79_02975 IPR014016 UvrD-like helicase, ATP-binding domain DOO79_02975 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_02975 IPR000212 DNA helicase, UvrD/REP type DOO79_02975 IPR014017 UvrD-like DNA helicase, C-terminal DOO79_02975 IPR034739 UvrD/AddA helicase, N-terminal DOO79_02975 IPR013986 DExx box DNA helicase domain superfamily DOO79_02975 IPR005753 DNA helicase, ATP-dependent, UvrD type DOO79_02990 IPR022924 Cardiolipin synthase DOO79_02990 IPR027379 Cardiolipin synthase N-terminal DOO79_02990 IPR025202 Phospholipase D-like domain DOO79_02990 IPR001736 Phospholipase D/Transphosphatidylase DOO79_02990 IPR030874 Cardiolipin synthase, Firmicutes-type DOO79_02995 IPR000847 Transcription regulator HTH, LysR DOO79_02995 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_02995 IPR005119 LysR, substrate-binding DOO79_02995 IPR036390 Winged helix DNA-binding domain superfamily DOO79_03000 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily DOO79_03000 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein DOO79_03000 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase DOO79_03005 IPR007400 PrpF protein DOO79_03015 IPR032466 Metal-dependent hydrolase DOO79_03015 IPR032465 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase DOO79_03015 IPR006680 Amidohydrolase-related DOO79_03020 IPR001705 Ribosomal protein L33 DOO79_03020 IPR038584 Ribosomal protein L33 superfamily DOO79_03020 IPR018264 Ribosomal protein L33, conserved site DOO79_03020 IPR011332 Zinc-binding ribosomal protein DOO79_03025 IPR034704 L28p-like DOO79_03025 IPR026569 Ribosomal protein L28/L24 DOO79_03025 IPR037147 Ribosomal protein L28/L24 superfamily DOO79_03025 IPR001383 Ribosomal protein L28 DOO79_03030 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA DOO79_03030 IPR001036 Acriflavin resistance protein DOO79_03030 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DOO79_03045 IPR022824 Multidrug resistance protein MdtA DOO79_03045 IPR006143 RND efflux pump, membrane fusion protein DOO79_03045 IPR039562 Membrane fusion protein, biotin-lipoyl like domain DOO79_03065 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOO79_03065 IPR003682 rRNA small subunit methyltransferase G DOO79_03070 IPR018946 Alkaline phosphatase D-related DOO79_03070 IPR008963 Purple acid phosphatase-like, N-terminal DOO79_03070 IPR038607 PhoD-like superfamily DOO79_03070 IPR032093 Phospholipase D, N-terminal DOO79_03075 IPR032093 Phospholipase D, N-terminal DOO79_03075 IPR018946 Alkaline phosphatase D-related DOO79_03075 IPR008963 Purple acid phosphatase-like, N-terminal DOO79_03075 IPR006311 Twin-arginine translocation pathway, signal sequence DOO79_03075 IPR038607 PhoD-like superfamily DOO79_03080 IPR004568 Phosphopantetheine-protein transferase domain DOO79_03080 IPR008278 4'-phosphopantetheinyl transferase domain DOO79_03080 IPR037143 4'-phosphopantetheinyl transferase domain superfamily DOO79_03085 IPR007341 Transglycosylase-associated protein DOO79_03095 IPR020848 AP endonuclease 1, conserved site DOO79_03095 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DOO79_03095 IPR005135 Endonuclease/exonuclease/phosphatase DOO79_03095 IPR004808 AP endonuclease 1 DOO79_03095 IPR037493 Exodeoxyribonuclease III-like DOO79_03095 IPR020847 AP endonuclease 1, binding site DOO79_03100 IPR000600 ROK family DOO79_03100 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_03100 IPR036390 Winged helix DNA-binding domain superfamily DOO79_03110 IPR027304 Trigger factor/SurA domain superfamily DOO79_03110 IPR023034 Peptidyl-prolyl isomerase SurA DOO79_03110 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type DOO79_03110 IPR015391 SurA N-terminal DOO79_03110 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site DOO79_03120 IPR038377 Sodium/glucose symporter superfamily DOO79_03120 IPR001734 Sodium/solute symporter DOO79_03120 IPR018212 Sodium/solute symporter, conserved site DOO79_03120 IPR014083 Cation/acetate symporter ActP DOO79_03125 IPR007436 Protein of unknown function DUF485 DOO79_03135 IPR000873 AMP-dependent synthetase/ligase DOO79_03135 IPR020845 AMP-binding, conserved site DOO79_03135 IPR025110 AMP-binding enzyme, C-terminal domain DOO79_03135 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain DOO79_03135 IPR011904 Acetate-CoA ligase DOO79_03135 IPR042099 AMP-dependent synthetase-like superfamily DOO79_03145 IPR011006 CheY-like superfamily DOO79_03145 IPR000792 Transcription regulator LuxR, C-terminal DOO79_03145 IPR016032 Signal transduction response regulator, C-terminal effector DOO79_03145 IPR001789 Signal transduction response regulator, receiver domain DOO79_03175 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily DOO79_03175 IPR041542 Beta-xylosidase, C-terminal Concanavalin A-like domain DOO79_03175 IPR006710 Glycoside hydrolase, family 43 DOO79_03175 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOO79_03185 IPR023210 NADP-dependent oxidoreductase domain DOO79_03185 IPR036812 NADP-dependent oxidoreductase domain superfamily DOO79_03195 IPR036291 NAD(P)-binding domain superfamily DOO79_03195 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOO79_03195 IPR002347 Short-chain dehydrogenase/reductase SDR DOO79_03200 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily DOO79_03200 IPR011234 Fumarylacetoacetase-like, C-terminal DOO79_03210 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain DOO79_03210 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DOO79_03210 IPR034610 L-fuconate dehydratase DOO79_03210 IPR036849 Enolase-like, C-terminal domain superfamily DOO79_03210 IPR029017 Enolase-like, N-terminal DOO79_03210 IPR029065 Enolase C-terminal domain-like DOO79_03215 IPR008000 Rhamnose/fucose mutarotase DOO79_03215 IPR011008 Dimeric alpha-beta barrel DOO79_03220 IPR036259 MFS transporter superfamily DOO79_03220 IPR020846 Major facilitator superfamily domain DOO79_03220 IPR011701 Major facilitator superfamily DOO79_03220 IPR005275 L-fucose permease FucP DOO79_03225 IPR029016 GAF-like domain superfamily DOO79_03225 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_03225 IPR005471 Transcription regulator IclR, N-terminal DOO79_03225 IPR036390 Winged helix DNA-binding domain superfamily DOO79_03225 IPR014757 Transcription regulator IclR, C-terminal DOO79_03235 IPR022929 Putative manganese efflux pump MntP DOO79_03235 IPR003810 Putative manganese efflux pump DOO79_03240 IPR000700 PAS-associated, C-terminal DOO79_03240 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_03240 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOO79_03240 IPR005467 Histidine kinase domain DOO79_03240 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_03240 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_03240 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_03255 IPR010383 Glycosyl hydrolase 94 DOO79_03255 IPR033432 Glycosyl hydrolase 36, catalytic domain DOO79_03255 IPR037814 Cellobionic acid phosphorylase, N-terminal DOO79_03255 IPR011013 Galactose mutarotase-like domain superfamily DOO79_03255 IPR008928 Six-hairpin glycosidase superfamily DOO79_03255 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily DOO79_03255 IPR012341 Six-hairpin glycosidase-like superfamily DOO79_03260 IPR039672 Lactose permease-like DOO79_03260 IPR036259 MFS transporter superfamily DOO79_03260 IPR001927 Sodium:galactoside symporter DOO79_03260 IPR018043 Sodium:galactoside symporter, conserved site DOO79_03265 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_03265 IPR006001 Carbohydrate kinase, thermoresistant glucokinase DOO79_03295 IPR007452 Translocation and assembly module TamB DOO79_03300 IPR035243 TamA, POTRA domain 1 DOO79_03300 IPR000184 Bacterial surface antigen (D15) DOO79_03300 IPR039910 Surface antigen D15-like DOO79_03345 IPR006194 Glycine-tRNA synthetase, heterodimeric DOO79_03345 IPR015944 Glycine-tRNA ligase, beta subunit DOO79_03345 IPR008909 DALR anticodon binding DOO79_03350 IPR006194 Glycine-tRNA synthetase, heterodimeric DOO79_03350 IPR002310 Glycine-tRNA ligase, alpha subunit DOO79_03370 IPR029062 Class I glutamine amidotransferase-like DOO79_03370 IPR022955 GMP synthase DOO79_03370 IPR017926 Glutamine amidotransferase DOO79_03370 IPR025777 GMP synthetase ATP pyrophosphatase domain DOO79_03370 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOO79_03370 IPR004739 GMP synthase, glutamine amidotransferase DOO79_03370 IPR001674 GMP synthase, C-terminal DOO79_03380 IPR019820 Sec-independent periplasmic protein translocase, conserved site DOO79_03380 IPR002033 Sec-independent periplasmic protein translocase TatC DOO79_03385 IPR003369 Sec-independent protein translocase protein TatA/B/E DOO79_03385 IPR018448 Twin-arginine translocation protein TatB DOO79_03390 IPR006312 Sec-independent protein translocase protein TatA/E DOO79_03390 IPR003369 Sec-independent protein translocase protein TatA/B/E DOO79_03400 IPR033644 Ferrochelatase, C-terminal DOO79_03400 IPR033659 Ferrochelatase, N-terminal DOO79_03400 IPR001015 Ferrochelatase DOO79_03400 IPR019772 Ferrochelatase, active site DOO79_03405 IPR000639 Epoxide hydrolase-like DOO79_03405 IPR000073 Alpha/beta hydrolase fold-1 DOO79_03405 IPR029058 Alpha/Beta hydrolase fold DOO79_03425 IPR007476 Putative exonuclease, RdgC DOO79_03430 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOO79_03430 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase DOO79_03430 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal DOO79_03430 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type DOO79_03440 IPR036237 Xylose isomerase-like superfamily DOO79_03440 IPR013452 Xylose isomerase, bacterial-type DOO79_03440 IPR001998 Xylose isomerase DOO79_03445 IPR028082 Periplasmic binding protein-like I DOO79_03445 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOO79_03445 IPR000843 LacI-type HTH domain DOO79_03445 IPR006377 Catabolite control protein A DOO79_03460 IPR034589 D-mannonate dehydratase-like DOO79_03460 IPR029017 Enolase-like, N-terminal DOO79_03460 IPR029065 Enolase C-terminal domain-like DOO79_03460 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site DOO79_03460 IPR034593 Mandelate racemase-like DOO79_03460 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DOO79_03460 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain DOO79_03460 IPR036849 Enolase-like, C-terminal domain superfamily DOO79_03465 IPR041542 Beta-xylosidase, C-terminal Concanavalin A-like domain DOO79_03465 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily DOO79_03465 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOO79_03465 IPR006710 Glycoside hydrolase, family 43 DOO79_03470 IPR001764 Glycoside hydrolase, family 3, N-terminal DOO79_03470 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily DOO79_03470 IPR017853 Glycoside hydrolase superfamily DOO79_03470 IPR026891 Fibronectin type III-like domain DOO79_03470 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily DOO79_03470 IPR002772 Glycoside hydrolase family 3 C-terminal domain DOO79_03470 IPR037524 PA14/GLEYA domain DOO79_03470 IPR011658 PA14 domain DOO79_03470 IPR013783 Immunoglobulin-like fold DOO79_03475 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOO79_03475 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DOO79_03475 IPR000669 Mannitol dehydrogenase DOO79_03475 IPR013118 Mannitol dehydrogenase, C-terminal DOO79_03475 IPR013131 Mannitol dehydrogenase, N-terminal DOO79_03475 IPR023027 Mannitol dehydrogenase, conserved site DOO79_03475 IPR036291 NAD(P)-binding domain superfamily DOO79_03520 IPR018752 Uncharacterised protein family UPF0753 DOO79_03545 IPR005042 TAL effector repeat DOO79_03575 IPR006118 Recombinase, conserved site DOO79_03575 IPR009057 Homeobox-like domain superfamily DOO79_03575 IPR006119 Resolvase, N-terminal catalytic domain DOO79_03575 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily DOO79_03575 IPR006120 Resolvase, HTH domain DOO79_03625 IPR011978 Uncharacterised protein family UPF0149 DOO79_03625 IPR036255 YgfB-like superfamily DOO79_03625 IPR004027 SEC-C motif DOO79_03665 IPR014710 RmlC-like jelly roll fold DOO79_03665 IPR011051 RmlC-like cupin domain superfamily DOO79_03665 IPR019780 Germin, manganese binding site DOO79_03665 IPR013096 Cupin 2, conserved barrel DOO79_03680 IPR004839 Aminotransferase, class I/classII DOO79_03680 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOO79_03680 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOO79_03680 IPR015424 Pyridoxal phosphate-dependent transferase DOO79_03680 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site DOO79_03680 IPR000796 Aspartate/other aminotransferase DOO79_03685 IPR000146 Fructose-1,6-bisphosphatase class 1 DOO79_03685 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal DOO79_03685 IPR028343 Fructose-1,6-bisphosphatase DOO79_03715 IPR041628 ChlI/MoxR, AAA lid domain DOO79_03715 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_03715 IPR011703 ATPase, AAA-3 DOO79_03755 IPR004736 MFS transporter, metabolite:H symporter DOO79_03755 IPR020846 Major facilitator superfamily domain DOO79_03755 IPR005829 Sugar transporter, conserved site DOO79_03755 IPR015041 Osmosensory transporter coiled coil DOO79_03755 IPR036259 MFS transporter superfamily DOO79_03755 IPR036292 Proline/betaine transporter ProP, C-terminal DOO79_03755 IPR005828 Major facilitator, sugar transporter-like DOO79_03765 IPR013766 Thioredoxin domain DOO79_03765 IPR005746 Thioredoxin DOO79_03765 IPR036249 Thioredoxin-like superfamily DOO79_03765 IPR017937 Thioredoxin, conserved site DOO79_03780 IPR036412 HAD-like superfamily DOO79_03780 IPR006357 HAD-superfamily hydrolase, subfamily IIA DOO79_03780 IPR023214 HAD superfamily DOO79_03780 IPR020476 NUDIX hydrolase DOO79_03780 IPR020084 NUDIX hydrolase, conserved site DOO79_03780 IPR000086 NUDIX hydrolase domain DOO79_03780 IPR015797 NUDIX hydrolase-like domain superfamily DOO79_03790 IPR013856 Peptidase M4 domain DOO79_03790 IPR027268 Peptidase M4/M1, CTD superfamily DOO79_03790 IPR023612 Peptidase M4 DOO79_03790 IPR001570 Peptidase M4, C-terminal DOO79_03790 IPR032475 Protealysin, N-terminal propeptide DOO79_03810 IPR036629 YjbJ superfamily DOO79_03810 IPR008462 CsbD-like domain DOO79_03870 IPR020103 Pseudouridine synthase, catalytic domain superfamily DOO79_03870 IPR002942 RNA-binding S4 domain DOO79_03870 IPR006145 Pseudouridine synthase, RsuA/RluA DOO79_03870 IPR006225 Pseudouridine synthase, RluC/RluD DOO79_03870 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site DOO79_03910 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOO79_03910 IPR009057 Homeobox-like domain superfamily DOO79_03910 IPR001647 DNA-binding HTH domain, TetR-type DOO79_03920 IPR036291 NAD(P)-binding domain superfamily DOO79_03920 IPR002347 Short-chain dehydrogenase/reductase SDR DOO79_03930 IPR011053 Single hybrid motif DOO79_03930 IPR011054 Rudiment single hybrid motif DOO79_03930 IPR000089 Biotin/lipoyl attachment DOO79_03930 IPR005482 Biotin carboxylase, C-terminal DOO79_03930 IPR011761 ATP-grasp fold DOO79_03930 IPR005481 Biotin carboxylase-like, N-terminal domain DOO79_03930 IPR011764 Biotin carboxylation domain DOO79_03930 IPR016185 Pre-ATP-grasp domain superfamily DOO79_03930 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain DOO79_03930 IPR001882 Biotin-binding site DOO79_03935 IPR014085 Allophanate hydrolase DOO79_03935 IPR036928 Amidase signature (AS) superfamily DOO79_03935 IPR023631 Amidase signature domain DOO79_03970 IPR008490 Transposase InsH, N-terminal DOO79_03970 IPR002559 Transposase, IS4-like DOO79_03985 IPR006344 RecBCD enzyme subunit RecD DOO79_03985 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_03985 IPR027785 UvrD-like helicase C-terminal domain DOO79_03995 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_03995 IPR006697 RecBCD enzyme subunit RecC DOO79_03995 IPR041500 RecC, C-terminal DOO79_03995 IPR011335 Restriction endonuclease type II-like DOO79_03995 IPR013986 DExx box DNA helicase domain superfamily DOO79_04010 IPR003439 ABC transporter-like DOO79_04010 IPR003593 AAA+ ATPase domain DOO79_04010 IPR017871 ABC transporter, conserved site DOO79_04010 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl DOO79_04010 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_04015 IPR003453 ABC transport permease subunit MlaE, Proteobacteria DOO79_04015 IPR030802 ABC transporter permease MalE DOO79_04020 IPR003399 Mce/MlaD DOO79_04020 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD DOO79_04025 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC DOO79_04025 IPR042245 Tgt2/MlaC superfamily DOO79_04035 IPR007428 MlaA lipoprotein DOO79_04045 IPR029760 Glutathione peroxidase conserved site DOO79_04045 IPR036249 Thioredoxin-like superfamily DOO79_04045 IPR033674 Thioredoxin/glutathione peroxidase BtuE DOO79_04045 IPR000889 Glutathione peroxidase DOO79_04045 IPR029759 Glutathione peroxidase active site DOO79_04055 IPR003798 DNA recombination RmuC DOO79_04060 IPR013154 Alcohol dehydrogenase, N-terminal DOO79_04060 IPR013149 Alcohol dehydrogenase, C-terminal DOO79_04060 IPR036291 NAD(P)-binding domain superfamily DOO79_04060 IPR020843 Polyketide synthase, enoylreductase domain DOO79_04060 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site DOO79_04060 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 DOO79_04060 IPR011032 GroES-like superfamily DOO79_04065 IPR036390 Winged helix DNA-binding domain superfamily DOO79_04065 IPR000847 Transcription regulator HTH, LysR DOO79_04065 IPR005119 LysR, substrate-binding DOO79_04065 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_04080 IPR036249 Thioredoxin-like superfamily DOO79_04080 IPR010987 Glutathione S-transferase, C-terminal-like DOO79_04080 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DOO79_04080 IPR004046 Glutathione S-transferase, C-terminal DOO79_04080 IPR004045 Glutathione S-transferase, N-terminal DOO79_04090 IPR004758 Amino acid transporter DOO79_04090 IPR002293 Amino acid/polyamine transporter I DOO79_04105 IPR024399 Protein of unknown function DUF2628 DOO79_04135 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOO79_04135 IPR041532 RlmI, PUA-like domain DOO79_04135 IPR019614 S-adenosylmethionine-dependent methyltransferase DOO79_04135 IPR002478 PUA domain DOO79_04135 IPR015947 PUA-like superfamily DOO79_04135 IPR036974 PUA domain superfamily DOO79_04135 IPR023542 rRNA large subunit methyltransferase I DOO79_04145 IPR022369 Integral membrane protein TerC, riboswitch-linked DOO79_04145 IPR005496 Integral membrane protein TerC DOO79_04155 IPR022764 Peptidase S54, rhomboid domain DOO79_04155 IPR035952 Rhomboid-like superfamily DOO79_04160 IPR030395 Glycerophosphodiester phosphodiesterase domain DOO79_04160 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily DOO79_04170 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DOO79_04170 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily DOO79_04170 IPR018296 Acid phosphatase, class A, bacterial, conserved site DOO79_04170 IPR001011 Acid phosphatase, class A, bacterial DOO79_04175 IPR005225 Small GTP-binding protein domain DOO79_04175 IPR018948 GTP-binding protein TrmE, N-terminal DOO79_04175 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_04175 IPR004520 tRNA modification GTPase MnmE DOO79_04175 IPR025867 MnmE, helical domain DOO79_04175 IPR027368 tRNA modification GTPase MnmE domain 2 DOO79_04175 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 DOO79_04175 IPR031168 TrmE-type guanine nucleotide-binding domain DOO79_04175 IPR006073 GTP binding domain DOO79_04180 IPR002509 NodB homology domain DOO79_04180 IPR026402 Chitooligosaccharide deacetylase NodB DOO79_04180 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel DOO79_04185 IPR038221 YidC, periplasmic domain superfamily DOO79_04185 IPR019998 Membrane insertase YidC DOO79_04185 IPR028055 Membrane insertase YidC/Oxa1, C-terminal DOO79_04185 IPR028053 Membrane insertase YidC, N-terminal DOO79_04185 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 DOO79_04185 IPR038210 Membrane insertase YidC, periplasmic domain DOO79_04190 IPR000100 Ribonuclease P DOO79_04190 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOO79_04190 IPR020539 Ribonuclease P, conserved site DOO79_04190 IPR020568 Ribosomal protein S5 domain 2-type fold DOO79_04195 IPR000271 Ribosomal protein L34 DOO79_04195 IPR020939 Ribosomal protein L34, conserved site DOO79_04200 IPR001957 Chromosomal replication control, initiator DnaA DOO79_04200 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_04200 IPR038454 DnaA, N-terminal domain superfamily DOO79_04200 IPR024633 DnaA N-terminal domain DOO79_04200 IPR020591 Chromosomal replication control, initiator DnaA-like DOO79_04200 IPR013159 Chromosomal replication initiator, DnaA C-terminal DOO79_04200 IPR013317 Chromosomal replication initiator protein DnaA DOO79_04200 IPR018312 Chromosomal replication control, initiator DnaA, conserved site DOO79_04200 IPR003593 AAA+ ATPase domain DOO79_04200 IPR010921 Trp repressor/replication initiator DOO79_04205 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal DOO79_04205 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal DOO79_04205 IPR022637 DNA polymerase III, beta sliding clamp, central DOO79_04205 IPR001001 DNA polymerase III, beta sliding clamp DOO79_04210 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_04210 IPR001238 DNA-binding, RecF DOO79_04210 IPR003395 RecF/RecN/SMC, N-terminal DOO79_04210 IPR018078 DNA-binding, RecF, conserved site DOO79_04210 IPR042174 DNA-binding RecF, domain 2 DOO79_04215 IPR006171 TOPRIM domain DOO79_04215 IPR018522 DNA topoisomerase, type IIA, conserved site DOO79_04215 IPR034160 DNA gyrase subunit B, TOPRIM domain DOO79_04215 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal DOO79_04215 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 DOO79_04215 IPR001241 DNA topoisomerase, type IIA DOO79_04215 IPR013760 DNA topoisomerase, type IIA-like domain superfamily DOO79_04215 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOO79_04215 IPR002288 DNA gyrase B subunit, C-terminal DOO79_04215 IPR011557 DNA gyrase, subunit B DOO79_04215 IPR041423 DNA gyrase subunit B insert domain DOO79_04215 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_04215 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_04215 IPR020568 Ribosomal protein S5 domain 2-type fold DOO79_04225 IPR001915 Peptidase M48 DOO79_04240 IPR002898 MotA/TolQ/ExbB proton channel DOO79_04245 IPR003400 Biopolymer transport protein ExbD/TolR DOO79_04250 IPR003400 Biopolymer transport protein ExbD/TolR DOO79_04255 IPR013785 Aldolase-type TIM barrel DOO79_04255 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ DOO79_04255 IPR036130 Pyridoxine 5'-phosphate synthase DOO79_04265 IPR022924 Cardiolipin synthase DOO79_04265 IPR027379 Cardiolipin synthase N-terminal DOO79_04265 IPR025202 Phospholipase D-like domain DOO79_04265 IPR001736 Phospholipase D/Transphosphatidylase DOO79_04265 IPR030874 Cardiolipin synthase, Firmicutes-type DOO79_04300 IPR042117 OMPP1/FadL/TodX superfamily DOO79_04300 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) DOO79_04315 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DOO79_04315 IPR023756 Glyoxylate/hydroxypyruvate reductase B DOO79_04315 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DOO79_04315 IPR036291 NAD(P)-binding domain superfamily DOO79_04315 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain DOO79_04320 IPR005151 Tail specific protease DOO79_04320 IPR004447 C-terminal-processing peptidase S41A DOO79_04320 IPR036034 PDZ superfamily DOO79_04320 IPR029045 ClpP/crotonase-like domain superfamily DOO79_04320 IPR001478 PDZ domain DOO79_04325 IPR016047 Peptidase M23 DOO79_04325 IPR011055 Duplicated hybrid motif DOO79_04335 IPR007484 Peptidase M28 DOO79_04345 IPR001547 Glycoside hydrolase, family 5 DOO79_04345 IPR018087 Glycoside hydrolase, family 5, conserved site DOO79_04345 IPR017853 Glycoside hydrolase superfamily DOO79_04355 IPR017853 Glycoside hydrolase superfamily DOO79_04355 IPR018087 Glycoside hydrolase, family 5, conserved site DOO79_04355 IPR001547 Glycoside hydrolase, family 5 DOO79_04365 IPR017853 Glycoside hydrolase superfamily DOO79_04365 IPR018087 Glycoside hydrolase, family 5, conserved site DOO79_04365 IPR001547 Glycoside hydrolase, family 5 DOO79_04375 IPR020843 Polyketide synthase, enoylreductase domain DOO79_04375 IPR036291 NAD(P)-binding domain superfamily DOO79_04375 IPR013149 Alcohol dehydrogenase, C-terminal DOO79_04375 IPR013154 Alcohol dehydrogenase, N-terminal DOO79_04375 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site DOO79_04375 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DOO79_04375 IPR011032 GroES-like superfamily DOO79_04380 IPR023753 FAD/NAD(P)-binding domain DOO79_04380 IPR036188 FAD/NAD(P)-binding domain superfamily DOO79_04380 IPR028261 Dihydroprymidine dehydrogenase domain II DOO79_04380 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOO79_04380 IPR009051 Alpha-helical ferredoxin DOO79_04380 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 DOO79_04385 IPR029055 Nucleophile aminohydrolases, N-terminal DOO79_04385 IPR002932 Glutamate synthase domain DOO79_04385 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily DOO79_04385 IPR006982 Glutamate synthase, central-N DOO79_04385 IPR013785 Aldolase-type TIM barrel DOO79_04385 IPR017932 Glutamine amidotransferase type 2 domain DOO79_04385 IPR002489 Glutamate synthase, alpha subunit, C-terminal DOO79_04415 IPR005119 LysR, substrate-binding DOO79_04415 IPR036390 Winged helix DNA-binding domain superfamily DOO79_04415 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_04415 IPR000847 Transcription regulator HTH, LysR DOO79_04435 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ DOO79_04435 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase DOO79_04435 IPR003362 Bacterial sugar transferase DOO79_04440 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like DOO79_04440 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain DOO79_04465 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain DOO79_04465 IPR001296 Glycosyl transferase, family 1 DOO79_04500 IPR005886 UDP-glucose 4-epimerase DOO79_04500 IPR036291 NAD(P)-binding domain superfamily DOO79_04500 IPR016040 NAD(P)-binding domain DOO79_04515 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_04515 IPR003593 AAA+ ATPase domain DOO79_04515 IPR017871 ABC transporter, conserved site DOO79_04515 IPR003439 ABC transporter-like DOO79_04515 IPR036640 ABC transporter type 1, transmembrane domain superfamily DOO79_04515 IPR011917 ABC transporter, lipid A export, MsbA DOO79_04515 IPR011527 ABC transporter type 1, transmembrane domain DOO79_04530 IPR006426 Asparagine synthase, glutamine-hydrolyzing DOO79_04530 IPR001962 Asparagine synthase DOO79_04530 IPR029055 Nucleophile aminohydrolases, N-terminal DOO79_04530 IPR017932 Glutamine amidotransferase type 2 domain DOO79_04530 IPR033738 Asparagine synthase, N-terminal domain DOO79_04545 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily DOO79_04545 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal DOO79_04545 IPR011104 HPr kinase/phosphorylase, C-terminal DOO79_04545 IPR003755 HPr(Ser) kinase/phosphorylase DOO79_04550 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_04550 IPR000863 Sulfotransferase domain DOO79_04645 IPR011545 DEAD/DEAH box helicase domain DOO79_04645 IPR018973 DEAD/DEAH-box helicase, putative DOO79_04645 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_04645 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOO79_04645 IPR001650 Helicase, C-terminal DOO79_04650 IPR005744 Hly-III DOO79_04650 IPR004254 AdipoR/Haemolysin-III-related DOO79_04670 IPR002347 Short-chain dehydrogenase/reductase SDR DOO79_04670 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOO79_04670 IPR036291 NAD(P)-binding domain superfamily DOO79_04675 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOO79_04675 IPR036291 NAD(P)-binding domain superfamily DOO79_04675 IPR002347 Short-chain dehydrogenase/reductase SDR DOO79_04690 IPR029039 Flavoprotein-like superfamily DOO79_04690 IPR003680 Flavodoxin-like fold DOO79_04700 IPR029060 PIN-like domain superfamily DOO79_04700 IPR002716 PIN domain DOO79_04700 IPR022907 VapC family DOO79_04705 IPR010985 Ribbon-helix-helix DOO79_04705 IPR013321 Arc-type ribbon-helix-helix DOO79_04725 IPR030874 Cardiolipin synthase, Firmicutes-type DOO79_04725 IPR022924 Cardiolipin synthase DOO79_04725 IPR027379 Cardiolipin synthase N-terminal DOO79_04725 IPR025202 Phospholipase D-like domain DOO79_04725 IPR001736 Phospholipase D/Transphosphatidylase DOO79_04730 IPR042080 RNA 2'-phosphotransferase, N-terminal domain DOO79_04730 IPR022928 RNA 2'-phosphotransferase KptA, putative DOO79_04730 IPR042081 RNA 2'-phosphotransferase, C-terminal domain DOO79_04730 IPR002745 Phosphotransferase KptA/Tpt1 DOO79_04735 IPR020846 Major facilitator superfamily domain DOO79_04735 IPR005828 Major facilitator, sugar transporter-like DOO79_04735 IPR036259 MFS transporter superfamily DOO79_04735 IPR004736 MFS transporter, metabolite:H symporter DOO79_04735 IPR005829 Sugar transporter, conserved site DOO79_04740 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein DOO79_04745 IPR010131 RND efflux system, outer membrane lipoprotein, NodT DOO79_04745 IPR003423 Outer membrane efflux protein DOO79_04750 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DOO79_04750 IPR006143 RND efflux pump, membrane fusion protein DOO79_04755 IPR012451 Protein of unknown function DUF1656 DOO79_04765 IPR001474 GTP cyclohydrolase I DOO79_04765 IPR018234 GTP cyclohydrolase I, conserved site DOO79_04765 IPR020602 GTP cyclohydrolase I domain DOO79_04800 IPR014718 Glycoside hydrolase-type carbohydrate-binding DOO79_04800 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase DOO79_04800 IPR025532 Glucose-6-phosphate 1-epimerase DOO79_04800 IPR011013 Galactose mutarotase-like domain superfamily DOO79_04815 IPR016084 Haem oxygenase-like, multi-helical DOO79_04815 IPR016053 Haem oxygenase-like DOO79_04820 IPR035965 PAS domain superfamily DOO79_04820 IPR016132 Phytochrome chromophore attachment domain DOO79_04820 IPR001294 Phytochrome DOO79_04820 IPR000014 PAS domain DOO79_04820 IPR029016 GAF-like domain superfamily DOO79_04820 IPR003018 GAF domain DOO79_04820 IPR013515 Phytochrome, central region DOO79_04820 IPR013654 PAS fold-2 DOO79_04825 IPR004711 Benzoate transporter DOO79_04855 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain DOO79_04855 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site DOO79_04855 IPR020629 Formamidopyrimidine-DNA glycosylase DOO79_04855 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding DOO79_04855 IPR010663 Zinc finger, FPG/IleRS-type DOO79_04855 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type DOO79_04855 IPR035937 MutM-like, N-terminal DOO79_04855 IPR010979 Ribosomal protein S13-like, H2TH DOO79_04875 IPR013986 DExx box DNA helicase domain superfamily DOO79_04875 IPR014017 UvrD-like DNA helicase, C-terminal DOO79_04875 IPR000212 DNA helicase, UvrD/REP type DOO79_04875 IPR005752 ATP-dependent DNA helicase Rep DOO79_04875 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_04875 IPR014016 UvrD-like helicase, ATP-binding domain DOO79_04875 IPR034739 UvrD/AddA helicase, N-terminal DOO79_04880 IPR016181 Acyl-CoA N-acyltransferase DOO79_04880 IPR000182 GNAT domain DOO79_04890 IPR007432 Protein of unknown function DUF480 DOO79_04890 IPR036390 Winged helix DNA-binding domain superfamily DOO79_04890 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_04900 IPR005519 Acid phosphatase, class B-like DOO79_04900 IPR023214 HAD superfamily DOO79_04900 IPR036412 HAD-like superfamily DOO79_04900 IPR006423 5-nucleotidase lipoprotein e(P4) DOO79_04905 IPR001754 Orotidine 5'-phosphate decarboxylase domain DOO79_04905 IPR018089 Orotidine 5'-phosphate decarboxylase, active site DOO79_04905 IPR014732 Orotidine 5'-phosphate decarboxylase DOO79_04905 IPR011060 Ribulose-phosphate binding barrel DOO79_04905 IPR013785 Aldolase-type TIM barrel DOO79_04910 IPR006905 Flavin-dependent halogenase DOO79_04910 IPR033856 Flavin-dependent tryptophan halogenase DOO79_04910 IPR036188 FAD/NAD(P)-binding domain superfamily DOO79_04925 IPR006377 Catabolite control protein A DOO79_04925 IPR000843 LacI-type HTH domain DOO79_04925 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOO79_04925 IPR028082 Periplasmic binding protein-like I DOO79_04940 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase DOO79_04940 IPR041728 GPAT/DHAPAT, acyltransferase domain DOO79_04940 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB DOO79_04940 IPR002123 Phospholipid/glycerol acyltransferase DOO79_04945 IPR014030 Beta-ketoacyl synthase, N-terminal DOO79_04945 IPR006162 Phosphopantetheine attachment site DOO79_04945 IPR018201 Beta-ketoacyl synthase, active site DOO79_04945 IPR011032 GroES-like superfamily DOO79_04945 IPR013154 Alcohol dehydrogenase, N-terminal DOO79_04945 IPR013149 Alcohol dehydrogenase, C-terminal DOO79_04945 IPR014031 Beta-ketoacyl synthase, C-terminal DOO79_04945 IPR001227 Acyl transferase domain superfamily DOO79_04945 IPR032821 Ketoacyl-synthetase, C-terminal extension DOO79_04945 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding DOO79_04945 IPR009081 Phosphopantetheine binding ACP domain DOO79_04945 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DOO79_04945 IPR020806 Polyketide synthase, phosphopantetheine-binding domain DOO79_04945 IPR013968 Polyketide synthase, ketoreductase domain DOO79_04945 IPR020843 Polyketide synthase, enoylreductase domain DOO79_04945 IPR016039 Thiolase-like DOO79_04945 IPR014043 Acyl transferase DOO79_04945 IPR020807 Polyketide synthase, dehydratase domain DOO79_04945 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DOO79_04945 IPR036736 ACP-like superfamily DOO79_04945 IPR036291 NAD(P)-binding domain superfamily DOO79_04945 IPR042104 Polyketide synthase, dehydratase domain superfamily DOO79_04975 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative DOO79_04975 IPR010758 Trans-2-enoyl-CoA reductase DOO79_04975 IPR024906 Enoyl reductase FAD binding domain DOO79_04985 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site DOO79_04985 IPR029056 Ribokinase-like DOO79_04985 IPR002139 Ribokinase/fructokinase DOO79_04985 IPR011611 Carbohydrate kinase PfkB DOO79_05060 IPR006047 Glycosyl hydrolase, family 13, catalytic domain DOO79_05060 IPR013783 Immunoglobulin-like fold DOO79_05060 IPR017853 Glycoside hydrolase superfamily DOO79_05060 IPR013780 Glycosyl hydrolase, all-beta DOO79_05060 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S DOO79_05060 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase DOO79_05065 IPR017853 Glycoside hydrolase superfamily DOO79_05065 IPR006047 Glycosyl hydrolase, family 13, catalytic domain DOO79_05065 IPR013780 Glycosyl hydrolase, all-beta DOO79_05065 IPR012810 Trehalose synthase/alpha-amylase, N-terminal DOO79_05065 IPR032091 Maltogenic Amylase, C-terminal DOO79_05070 IPR017853 Glycoside hydrolase superfamily DOO79_05070 IPR014756 Immunoglobulin E-set DOO79_05070 IPR013780 Glycosyl hydrolase, all-beta DOO79_05070 IPR004193 Glycoside hydrolase, family 13, N-terminal DOO79_05070 IPR006047 Glycosyl hydrolase, family 13, catalytic domain DOO79_05070 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB DOO79_05070 IPR037439 1,4-alpha-glucan-branching enzyme DOO79_05070 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta DOO79_05070 IPR013783 Immunoglobulin-like fold DOO79_05080 IPR023210 NADP-dependent oxidoreductase domain DOO79_05080 IPR036812 NADP-dependent oxidoreductase domain superfamily DOO79_05085 IPR019826 Carboxylesterase type B, active site DOO79_05085 IPR029058 Alpha/Beta hydrolase fold DOO79_05085 IPR002018 Carboxylesterase, type B DOO79_05090 IPR036514 SGNH hydrolase superfamily DOO79_05090 IPR013830 SGNH hydrolase-type esterase domain DOO79_05090 IPR013094 Alpha/beta hydrolase fold-3 DOO79_05090 IPR029058 Alpha/Beta hydrolase fold DOO79_05100 IPR038404 TRAP transporter solute receptor DctP superfamily DOO79_05100 IPR004682 TRAP transporter solute receptor, DctP family DOO79_05100 IPR018389 TRAP transporter solute receptor DctP/TeaA DOO79_05110 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DOO79_05110 IPR004681 TRAP transporter large membrane protein DctM DOO79_05115 IPR006710 Glycoside hydrolase, family 43 DOO79_05115 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOO79_05115 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily DOO79_05115 IPR041542 Beta-xylosidase, C-terminal Concanavalin A-like domain DOO79_05120 IPR000843 LacI-type HTH domain DOO79_05120 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOO79_05120 IPR028082 Periplasmic binding protein-like I DOO79_05120 IPR023588 Transcription regulator HTH, PurR DOO79_05130 IPR014710 RmlC-like jelly roll fold DOO79_05130 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal DOO79_05130 IPR021120 KduI/IolB isomerase DOO79_05130 IPR007045 5-keto 4-deoxyuronate isomerase DOO79_05130 IPR011051 RmlC-like cupin domain superfamily DOO79_05135 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase DOO79_05135 IPR002347 Short-chain dehydrogenase/reductase SDR DOO79_05135 IPR036291 NAD(P)-binding domain superfamily DOO79_05135 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOO79_05145 IPR001087 GDSL lipase/esterase DOO79_05145 IPR036514 SGNH hydrolase superfamily DOO79_05145 IPR037459 Rhamnogalacturonan acetylesterase RhgT-like DOO79_05160 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site DOO79_05160 IPR005960 Phenylalanine-4-hydroxylase, monomeric form DOO79_05160 IPR036951 Aromatic amino acid hydroxylase superfamily DOO79_05160 IPR001273 Aromatic amino acid hydroxylase DOO79_05160 IPR019774 Aromatic amino acid hydroxylase, C-terminal DOO79_05160 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily DOO79_05165 IPR011008 Dimeric alpha-beta barrel DOO79_05165 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DOO79_05165 IPR036390 Winged helix DNA-binding domain superfamily DOO79_05165 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DOO79_05165 IPR019888 Transcription regulator AsnC-type DOO79_05165 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_05165 IPR000485 AsnC-type HTH domain DOO79_05170 IPR011662 Secretin/TonB, short N-terminal domain DOO79_05170 IPR039423 TonB-dependent receptor-like DOO79_05170 IPR000531 TonB-dependent receptor-like, beta-barrel DOO79_05170 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DOO79_05170 IPR010917 TonB-dependent receptor, conserved site DOO79_05170 IPR012910 TonB-dependent receptor, plug domain DOO79_05170 IPR037066 TonB-dependent receptor, plug domain superfamily DOO79_05170 IPR010105 TonB-dependent siderophore receptor DOO79_05175 IPR002641 Patatin-like phospholipase domain DOO79_05175 IPR001423 Lysophospholipase patatin, conserved site DOO79_05175 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DOO79_05185 IPR017871 ABC transporter, conserved site DOO79_05185 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_05185 IPR003439 ABC transporter-like DOO79_05185 IPR003593 AAA+ ATPase domain DOO79_05200 IPR003593 AAA+ ATPase domain DOO79_05200 IPR003439 ABC transporter-like DOO79_05200 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_05200 IPR017871 ABC transporter, conserved site DOO79_05205 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOO79_05205 IPR035906 MetI-like superfamily DOO79_05215 IPR016187 C-type lectin fold DOO79_05215 IPR024775 DinB-like domain DOO79_05215 IPR034660 DinB/YfiT-like putative metalloenzymes DOO79_05215 IPR017806 Ergothioneine biosynthesis protein EgtB DOO79_05215 IPR032890 Hercynine oxygenase, Actinobacteria DOO79_05215 IPR005532 Sulfatase-modifying factor enzyme DOO79_05215 IPR042095 Sulfatase-modifying factor enzyme superfamily DOO79_05270 IPR002744 MIP18 family-like DOO79_05270 IPR019591 Mrp/NBP35 ATP-binding protein DOO79_05270 IPR000808 Mrp, conserved site DOO79_05270 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_05270 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 DOO79_05270 IPR034904 Fe-S cluster assembly domain superfamily DOO79_05275 IPR029033 Histidine phosphatase superfamily DOO79_05275 IPR013078 Histidine phosphatase superfamily, clade-1 DOO79_05285 IPR025202 Phospholipase D-like domain DOO79_05285 IPR001736 Phospholipase D/Transphosphatidylase DOO79_05295 IPR006683 Thioesterase domain DOO79_05295 IPR029069 HotDog domain superfamily DOO79_05295 IPR003736 Phenylacetic acid degradation-related domain DOO79_05325 IPR013149 Alcohol dehydrogenase, C-terminal DOO79_05325 IPR013154 Alcohol dehydrogenase, N-terminal DOO79_05325 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site DOO79_05325 IPR011032 GroES-like superfamily DOO79_05325 IPR036291 NAD(P)-binding domain superfamily DOO79_05325 IPR020843 Polyketide synthase, enoylreductase domain DOO79_05335 IPR003824 Undecaprenyl-diphosphatase UppP DOO79_05345 IPR027303 Glutamine synthetase, glycine-rich site DOO79_05345 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain DOO79_05345 IPR027302 Glutamine synthetase, N-terminal conserved site DOO79_05345 IPR001637 Glutamine synthetase class-I, adenylation site DOO79_05345 IPR004809 Glutamine synthetase type I DOO79_05345 IPR036651 Glutamine synthetase, N-terminal domain superfamily DOO79_05345 IPR008147 Glutamine synthetase, beta-Grasp domain DOO79_05345 IPR008146 Glutamine synthetase, catalytic domain DOO79_05350 IPR002187 Nitrogen regulatory protein PII DOO79_05350 IPR002332 Nitrogen regulatory protein P-II, urydylation site DOO79_05350 IPR011322 Nitrogen regulatory PII-like, alpha/beta DOO79_05350 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DOO79_05350 IPR017918 Nitrogen regulatory protein PII, conserved site DOO79_05355 IPR018047 Ammonium transporter, conserved site DOO79_05355 IPR029020 Ammonium/urea transporter DOO79_05355 IPR001905 Ammonium transporter DOO79_05355 IPR024041 Ammonium transporter AmtB-like domain DOO79_05360 IPR013767 PAS fold DOO79_05360 IPR005467 Histidine kinase domain DOO79_05360 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_05360 IPR035965 PAS domain superfamily DOO79_05360 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOO79_05360 IPR000014 PAS domain DOO79_05360 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_05360 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_05360 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_05365 IPR002078 RNA polymerase sigma factor 54 interaction domain DOO79_05365 IPR010114 DNA-binding transcriptional regulator NtrC DOO79_05365 IPR025944 Sigma-54 interaction domain, conserved site DOO79_05365 IPR003593 AAA+ ATPase domain DOO79_05365 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DOO79_05365 IPR011006 CheY-like superfamily DOO79_05365 IPR002197 DNA binding HTH domain, Fis-type DOO79_05365 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_05365 IPR001789 Signal transduction response regulator, receiver domain DOO79_05365 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DOO79_05365 IPR009057 Homeobox-like domain superfamily DOO79_05370 IPR018152 Superoxide dismutase, copper/zinc, binding site DOO79_05370 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily DOO79_05370 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone DOO79_05370 IPR001424 Superoxide dismutase, copper/zinc binding domain DOO79_05375 IPR001424 Superoxide dismutase, copper/zinc binding domain DOO79_05375 IPR018152 Superoxide dismutase, copper/zinc, binding site DOO79_05375 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone DOO79_05375 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily DOO79_05390 IPR012806 Acetyl-CoA C-acyltransferase FadI DOO79_05390 IPR002155 Thiolase DOO79_05390 IPR016039 Thiolase-like DOO79_05390 IPR020610 Thiolase, active site DOO79_05390 IPR020617 Thiolase, C-terminal DOO79_05390 IPR020613 Thiolase, conserved site DOO79_05390 IPR020616 Thiolase, N-terminal DOO79_05425 IPR036873 Rhodanese-like domain superfamily DOO79_05425 IPR001763 Rhodanese-like domain DOO79_05430 IPR003708 Bacterial protein export chaperone SecB DOO79_05430 IPR035958 SecB-like superfamily DOO79_05435 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOO79_05435 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DOO79_05435 IPR036291 NAD(P)-binding domain superfamily DOO79_05435 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal DOO79_05435 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal DOO79_05435 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent DOO79_05480 IPR006305 Flagellar biosynthesis protein FliQ DOO79_05480 IPR002191 Bacterial export protein family 3 DOO79_05490 IPR029025 Type III secretion system substrate exporter, C-terminal DOO79_05490 IPR006136 Flagellar biosynthetic protein FlhB DOO79_05490 IPR006135 Type III secretion system substrate exporter DOO79_05495 IPR042193 FHIPEP, domain 3 DOO79_05495 IPR042194 FHIPEP, domain 1 DOO79_05495 IPR042196 FHIPEP, domain 4 DOO79_05495 IPR025505 FHIPEP conserved site DOO79_05495 IPR006301 Flagellar biosynthesis protein FlhA DOO79_05495 IPR001712 Type III secretion system FHIPEP DOO79_05500 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DOO79_05500 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DOO79_05500 IPR019776 Flagellar basal body rod protein, conserved site DOO79_05500 IPR001444 Flagellar basal body rod protein, N-terminal DOO79_05500 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like DOO79_05500 IPR012836 Flagellar basal-body rod FlgF DOO79_05505 IPR001444 Flagellar basal body rod protein, N-terminal DOO79_05505 IPR019776 Flagellar basal body rod protein, conserved site DOO79_05505 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like DOO79_05505 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DOO79_05505 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DOO79_05505 IPR012834 Flagellar basal-body rod FlgG DOO79_05520 IPR001782 Flagellar P-ring protein DOO79_05535 IPR001624 Flagellar hook-basal body complex protein FliE DOO79_05540 IPR006182 Secretory protein YscJ/FliF DOO79_05540 IPR000067 Flagellar M-ring protein FliF DOO79_05540 IPR013556 Flagellar M-ring C-terminal DOO79_05555 IPR003593 AAA+ ATPase domain DOO79_05555 IPR000225 Armadillo DOO79_05555 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site DOO79_05555 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain DOO79_05555 IPR032463 ATPase, type III secretion system, FliI DOO79_05555 IPR005714 ATPase, type III secretion system, FliI/YscN DOO79_05555 IPR022425 Flagellar export ATPase FliI, clade 2 DOO79_05555 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain DOO79_05555 IPR040627 T3SS EscN ATPase, C-terminal DOO79_05555 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_05580 IPR005648 Flagellar hook capping protein DOO79_05585 IPR019776 Flagellar basal body rod protein, conserved site DOO79_05585 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like DOO79_05585 IPR001444 Flagellar basal body rod protein, N-terminal DOO79_05585 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DOO79_05585 IPR011491 Flagellar hook protein FlgE DOO79_05585 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DOO79_05585 IPR037058 Flagellar hook protein FlgE superfamily DOO79_05595 IPR001543 Surface presentation of antigen (SpoA) DOO79_05595 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb DOO79_05595 IPR036429 SpoA-like superfamily DOO79_05595 IPR012826 Flagellar motor switch FliN DOO79_05605 IPR005838 Type III secretion system inner membrane P protein DOO79_05605 IPR005837 Flagellar transport protein FliP DOO79_05610 IPR007624 RNA polymerase sigma-70 region 3 DOO79_05610 IPR013325 RNA polymerase sigma factor, region 2 DOO79_05610 IPR007630 RNA polymerase sigma-70 region 4 DOO79_05610 IPR009042 RNA polymerase sigma-70 region 1.2 DOO79_05610 IPR000943 RNA polymerase sigma-70 DOO79_05610 IPR014284 RNA polymerase sigma-70 like domain DOO79_05610 IPR013324 RNA polymerase sigma factor, region 3/4-like DOO79_05610 IPR007627 RNA polymerase sigma-70 region 2 DOO79_05610 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_05615 IPR029035 DHS-like NAD/FAD-binding domain superfamily DOO79_05615 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain DOO79_05615 IPR012000 Thiamine pyrophosphate enzyme, central domain DOO79_05615 IPR000399 TPP-binding enzyme, conserved site DOO79_05615 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding DOO79_05615 IPR029061 Thiamin diphosphate-binding fold DOO79_05620 IPR012292 Globin/Protoglobin DOO79_05620 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_05620 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_05620 IPR009050 Globin-like superfamily DOO79_05620 IPR005467 Histidine kinase domain DOO79_05620 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_05620 IPR039379 Protoglobin, globin sensor domain DOO79_05620 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_05620 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOO79_05625 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_05625 IPR002197 DNA binding HTH domain, Fis-type DOO79_05625 IPR009057 Homeobox-like domain superfamily DOO79_05625 IPR011006 CheY-like superfamily DOO79_05625 IPR001789 Signal transduction response regulator, receiver domain DOO79_05625 IPR003593 AAA+ ATPase domain DOO79_05625 IPR002078 RNA polymerase sigma factor 54 interaction domain DOO79_05625 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DOO79_05625 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DOO79_05625 IPR025944 Sigma-54 interaction domain, conserved site DOO79_05625 IPR010114 DNA-binding transcriptional regulator NtrC DOO79_05640 IPR036259 MFS transporter superfamily DOO79_05640 IPR011701 Major facilitator superfamily DOO79_05640 IPR020846 Major facilitator superfamily domain DOO79_05645 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase DOO79_05645 IPR029028 Alpha/beta knot methyltransferases DOO79_05645 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DOO79_05645 IPR001537 tRNA/rRNA methyltransferase, SpoU type DOO79_05660 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal DOO79_05660 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DOO79_05660 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 DOO79_05660 IPR016039 Thiolase-like DOO79_05665 IPR036597 Fido-like domain superfamily DOO79_05665 IPR025758 Fic/DOC N-terminal DOO79_05665 IPR040198 Fido domain-containing protein DOO79_05665 IPR026287 Protein adenylyltransferase SoFic-like DOO79_05665 IPR003812 Fido domain DOO79_05670 IPR000639 Epoxide hydrolase-like DOO79_05670 IPR029058 Alpha/Beta hydrolase fold DOO79_05670 IPR000073 Alpha/beta hydrolase fold-1 DOO79_05675 IPR005358 Putative zinc- or iron-chelating domain containing protein DOO79_05680 IPR020845 AMP-binding, conserved site DOO79_05680 IPR000873 AMP-dependent synthetase/ligase DOO79_05680 IPR042099 AMP-dependent synthetase-like superfamily DOO79_05685 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase DOO79_05685 IPR036291 NAD(P)-binding domain superfamily DOO79_05700 IPR011127 D-alanine--D-alanine ligase, N-terminal domain DOO79_05700 IPR005905 D-alanine--D-alanine ligase DOO79_05700 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site DOO79_05700 IPR011761 ATP-grasp fold DOO79_05700 IPR016185 Pre-ATP-grasp domain superfamily DOO79_05700 IPR011095 D-alanine--D-alanine ligase, C-terminal DOO79_05700 IPR013815 ATP-grasp fold, subdomain 1 DOO79_05710 IPR011009 Protein kinase-like domain superfamily DOO79_05710 IPR010232 Probable protein kinase UbiB DOO79_05710 IPR004147 UbiB domain DOO79_05720 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site DOO79_05720 IPR020103 Pseudouridine synthase, catalytic domain superfamily DOO79_05720 IPR006145 Pseudouridine synthase, RsuA/RluA DOO79_05730 IPR000352 Peptide chain release factor class I DOO79_05740 IPR000246 Peptidase T2, asparaginase 2 DOO79_05740 IPR029055 Nucleophile aminohydrolases, N-terminal DOO79_05745 IPR001567 Peptidase M3A/M3B catalytic domain DOO79_05745 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 DOO79_05750 IPR001279 Metallo-beta-lactamase DOO79_05750 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D DOO79_05750 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOO79_05770 IPR018062 HTH domain AraC-type, conserved site DOO79_05770 IPR018060 DNA binding HTH domain, AraC-type DOO79_05775 IPR038770 Sodium/solute symporter superfamily DOO79_05775 IPR006153 Cation/H+ exchanger DOO79_05780 IPR036390 Winged helix DNA-binding domain superfamily DOO79_05780 IPR005119 LysR, substrate-binding DOO79_05780 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_05780 IPR000847 Transcription regulator HTH, LysR DOO79_05785 IPR019830 Malate synthase, conserved site DOO79_05785 IPR006252 Malate synthase A DOO79_05785 IPR001465 Malate synthase DOO79_05785 IPR011076 Malate synthase-like superfamily DOO79_05790 IPR039556 ICL/PEPM domain DOO79_05790 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site DOO79_05790 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DOO79_05790 IPR040442 Pyruvate kinase-like domain superfamily DOO79_05790 IPR006254 Isocitrate lyase DOO79_05795 IPR000160 GGDEF domain DOO79_05795 IPR009050 Globin-like superfamily DOO79_05795 IPR012292 Globin/Protoglobin DOO79_05795 IPR039435 Diguanylate cyclase DosC, globin sensor domain DOO79_05795 IPR029787 Nucleotide cyclase DOO79_05830 IPR041265 Propionyl-coenzyme A carboxylase, BT domain DOO79_05830 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain DOO79_05830 IPR011054 Rudiment single hybrid motif DOO79_05830 IPR005482 Biotin carboxylase, C-terminal DOO79_05830 IPR011764 Biotin carboxylation domain DOO79_05830 IPR001882 Biotin-binding site DOO79_05830 IPR005481 Biotin carboxylase-like, N-terminal domain DOO79_05830 IPR013815 ATP-grasp fold, subdomain 1 DOO79_05830 IPR011761 ATP-grasp fold DOO79_05830 IPR011053 Single hybrid motif DOO79_05830 IPR016185 Pre-ATP-grasp domain superfamily DOO79_05830 IPR000089 Biotin/lipoyl attachment DOO79_05835 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal DOO79_05835 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal DOO79_05835 IPR029045 ClpP/crotonase-like domain superfamily DOO79_05835 IPR034733 Acetyl-CoA carboxylase DOO79_05840 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DOO79_05840 IPR006089 Acyl-CoA dehydrogenase, conserved site DOO79_05840 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DOO79_05840 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DOO79_05840 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DOO79_05840 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DOO79_05840 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily DOO79_05845 IPR009057 Homeobox-like domain superfamily DOO79_05845 IPR001647 DNA-binding HTH domain, TetR-type DOO79_05845 IPR041490 HTH-type transcriptional repressor KstR2, C-terminal DOO79_05845 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOO79_05900 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DOO79_05900 IPR003495 CobW/HypB/UreG, nucleotide-binding domain DOO79_05900 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_05920 IPR005654 ATPase, AFG1-like DOO79_05920 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_05920 IPR030870 Cell division protein ZapE DOO79_05925 IPR036390 Winged helix DNA-binding domain superfamily DOO79_05925 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_05925 IPR000835 MarR-type HTH domain DOO79_05930 IPR036102 OsmC/Ohr superfamily DOO79_05930 IPR003718 OsmC/Ohr family DOO79_05930 IPR019953 Organic hydroperoxide resistance protein famiy DOO79_05930 IPR015946 K homology domain-like, alpha/beta DOO79_05960 IPR013149 Alcohol dehydrogenase, C-terminal DOO79_05960 IPR041694 Oxidoreductase, N-terminal domain DOO79_05960 IPR011032 GroES-like superfamily DOO79_05960 IPR036291 NAD(P)-binding domain superfamily DOO79_05960 IPR020843 Polyketide synthase, enoylreductase domain DOO79_05965 IPR036812 NADP-dependent oxidoreductase domain superfamily DOO79_05965 IPR023210 NADP-dependent oxidoreductase domain DOO79_05975 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site DOO79_05975 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F DOO79_05975 IPR006145 Pseudouridine synthase, RsuA/RluA DOO79_05975 IPR020103 Pseudouridine synthase, catalytic domain superfamily DOO79_05975 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain DOO79_05990 IPR010225 ATP-dependent helicase HrpB DOO79_05990 IPR007502 Helicase-associated domain DOO79_05990 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOO79_05990 IPR001650 Helicase, C-terminal DOO79_05990 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal DOO79_05990 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_05990 IPR011545 DEAD/DEAH box helicase domain DOO79_05995 IPR009921 Domain of unknown function DUF1456 DOO79_06000 IPR023419 Transthyretin, conserved site DOO79_06000 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily DOO79_06000 IPR023416 Transthyretin/hydroxyisourate hydrolase domain DOO79_06000 IPR014306 Hydroxyisourate hydrolase DOO79_06000 IPR023418 Transthyretin, thyroxine binding site DOO79_06000 IPR000895 Transthyretin/hydroxyisourate hydrolase DOO79_06005 IPR036188 FAD/NAD(P)-binding domain superfamily DOO79_06005 IPR038732 FAD-dependent urate hydroxylase HpyO, FAD/NAD(P)-binding domain DOO79_06010 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase DOO79_06010 IPR019842 Uricase, conserved site DOO79_06010 IPR002042 Uricase DOO79_06010 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 DOO79_06010 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily DOO79_06025 IPR000192 Aminotransferase class V domain DOO79_06025 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase DOO79_06025 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOO79_06025 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DOO79_06025 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOO79_06025 IPR015424 Pyridoxal phosphate-dependent transferase DOO79_06030 IPR036264 Bacterial exopeptidase dimerisation domain DOO79_06030 IPR002933 Peptidase M20 DOO79_06030 IPR011650 Peptidase M20, dimerisation domain DOO79_06030 IPR010158 Amidase, carbamoylase-type DOO79_06035 IPR005119 LysR, substrate-binding DOO79_06035 IPR000847 Transcription regulator HTH, LysR DOO79_06035 IPR036390 Winged helix DNA-binding domain superfamily DOO79_06035 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_06040 IPR011701 Major facilitator superfamily DOO79_06040 IPR036259 MFS transporter superfamily DOO79_06040 IPR020846 Major facilitator superfamily domain DOO79_06050 IPR029055 Nucleophile aminohydrolases, N-terminal DOO79_06055 IPR014087 1-carboxybiuret hydrolase, AtzE subunit DOO79_06055 IPR036928 Amidase signature (AS) superfamily DOO79_06055 IPR023631 Amidase signature domain DOO79_06055 IPR000120 Amidase DOO79_06060 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site DOO79_06060 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain DOO79_06060 IPR023186 Inosine/uridine-preferring nucleoside hydrolase DOO79_06060 IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA DOO79_06060 IPR036452 Ribonucleoside hydrolase-like DOO79_06070 IPR026033 Azaguanine-like transporters DOO79_06070 IPR006043 Xanthine/uracil/vitamin C permease DOO79_06080 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain DOO79_06080 IPR036010 2Fe-2S ferredoxin-like superfamily DOO79_06080 IPR017927 FAD-binding domain, ferredoxin reductase-type DOO79_06080 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site DOO79_06080 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DOO79_06080 IPR012675 Beta-grasp domain superfamily DOO79_06080 IPR017938 Riboflavin synthase-like beta-barrel DOO79_06080 IPR000951 Phthalate dioxygenase reductase DOO79_06085 IPR017941 Rieske [2Fe-2S] iron-sulphur domain DOO79_06085 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily DOO79_06090 IPR005119 LysR, substrate-binding DOO79_06090 IPR000847 Transcription regulator HTH, LysR DOO79_06090 IPR036390 Winged helix DNA-binding domain superfamily DOO79_06090 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_06095 IPR018228 Deoxyribonuclease, TatD-related, conserved site DOO79_06095 IPR024918 3'-5' ssDNA/RNA exonuclease TatD DOO79_06095 IPR001130 TatD family DOO79_06095 IPR032466 Metal-dependent hydrolase DOO79_06120 IPR011701 Major facilitator superfamily DOO79_06120 IPR020846 Major facilitator superfamily domain DOO79_06120 IPR036259 MFS transporter superfamily DOO79_06135 IPR029035 DHS-like NAD/FAD-binding domain superfamily DOO79_06135 IPR026590 Sirtuin family, catalytic core domain DOO79_06135 IPR003000 Sirtuin family DOO79_06135 IPR026591 Sirtuin, catalytic core small domain superfamily DOO79_06135 IPR026587 Sirtuin, class II DOO79_06140 IPR013785 Aldolase-type TIM barrel DOO79_06140 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal DOO79_06140 IPR023663 NADPH dehydrogenase DOO79_06145 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site DOO79_06145 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain DOO79_06145 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DOO79_06145 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding DOO79_06145 IPR036291 NAD(P)-binding domain superfamily DOO79_06145 IPR015815 3-hydroxyisobutyrate dehydrogenase-related DOO79_06145 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOO79_06155 IPR004810 Formyltetrahydrofolate deformylase DOO79_06155 IPR036477 Formyl transferase, N-terminal domain superfamily DOO79_06155 IPR002376 Formyl transferase, N-terminal DOO79_06155 IPR002912 ACT domain DOO79_06155 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain DOO79_06160 IPR011006 CheY-like superfamily DOO79_06160 IPR001789 Signal transduction response regulator, receiver domain DOO79_06160 IPR039420 Transcriptional regulatory protein WalR-like DOO79_06160 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_06160 IPR001867 OmpR/PhoB-type DNA-binding domain DOO79_06160 IPR016032 Signal transduction response regulator, C-terminal effector DOO79_06165 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_06165 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOO79_06165 IPR003660 HAMP domain DOO79_06165 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_06165 IPR005467 Histidine kinase domain DOO79_06165 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_06165 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_06170 IPR006143 RND efflux pump, membrane fusion protein DOO79_06170 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DOO79_06175 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 DOO79_06175 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DOO79_06175 IPR001036 Acriflavin resistance protein DOO79_06180 IPR010131 RND efflux system, outer membrane lipoprotein, NodT DOO79_06180 IPR003423 Outer membrane efflux protein DOO79_06195 IPR003828 Epoxyqueuosine reductase QueH DOO79_06200 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain DOO79_06200 IPR036390 Winged helix DNA-binding domain superfamily DOO79_06200 IPR000847 Transcription regulator HTH, LysR DOO79_06200 IPR005119 LysR, substrate-binding DOO79_06200 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_06205 IPR019912 FMN reductase, MsuE-like DOO79_06205 IPR029039 Flavoprotein-like superfamily DOO79_06205 IPR005025 NADPH-dependent FMN reductase-like DOO79_06215 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal DOO79_06215 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal DOO79_06215 IPR038071 UROD/MetE-like superfamily DOO79_06215 IPR006276 Cobalamin-independent methionine synthase DOO79_06220 IPR004684 2-keto-3-deoxygluconate permease DOO79_06220 IPR018395 2-keto-3-deoxygluconate permease, subgroup DOO79_06235 IPR008030 NmrA-like domain DOO79_06235 IPR036291 NAD(P)-binding domain superfamily DOO79_06240 IPR036390 Winged helix DNA-binding domain superfamily DOO79_06240 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_06240 IPR002577 Helix-turn-helix, HxlR type DOO79_06310 IPR005829 Sugar transporter, conserved site DOO79_06310 IPR011701 Major facilitator superfamily DOO79_06310 IPR020846 Major facilitator superfamily domain DOO79_06310 IPR036259 MFS transporter superfamily DOO79_06315 IPR006675 HDIG domain DOO79_06315 IPR021812 Protein of unknown function DUF3391 DOO79_06315 IPR003607 HD/PDEase domain DOO79_06315 IPR006674 HD domain DOO79_06315 IPR037522 HD-GYP domain DOO79_06335 IPR036291 NAD(P)-binding domain superfamily DOO79_06335 IPR002347 Short-chain dehydrogenase/reductase SDR DOO79_06340 IPR015590 Aldehyde dehydrogenase domain DOO79_06340 IPR016162 Aldehyde dehydrogenase, N-terminal DOO79_06340 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DOO79_06340 IPR016160 Aldehyde dehydrogenase, cysteine active site DOO79_06340 IPR016163 Aldehyde dehydrogenase, C-terminal DOO79_06340 IPR016161 Aldehyde/histidinol dehydrogenase DOO79_06350 IPR012733 4-hydroxybenzoate 3-monooxygenase DOO79_06350 IPR036188 FAD/NAD(P)-binding domain superfamily DOO79_06350 IPR002938 FAD-binding domain DOO79_06360 IPR018485 Carbohydrate kinase, FGGY, C-terminal DOO79_06360 IPR000577 Carbohydrate kinase, FGGY DOO79_06360 IPR018484 Carbohydrate kinase, FGGY, N-terminal DOO79_06360 IPR018483 Carbohydrate kinase, FGGY, conserved site DOO79_06360 IPR005999 Glycerol kinase DOO79_06365 IPR000425 Major intrinsic protein DOO79_06365 IPR023271 Aquaporin-like DOO79_06365 IPR022357 Major intrinsic protein, conserved site DOO79_06370 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily DOO79_06370 IPR031656 Alpha-glycerophosphate oxidase, C-terminal DOO79_06370 IPR036188 FAD/NAD(P)-binding domain superfamily DOO79_06370 IPR006076 FAD dependent oxidoreductase DOO79_06370 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase DOO79_06375 IPR014036 DeoR C-terminal sensor domain DOO79_06375 IPR037171 NagB/RpiA transferase-like DOO79_06375 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_06375 IPR018356 Transcription regulator, HTH DeoR-type, conserved site DOO79_06375 IPR001034 DeoR-type HTH domain DOO79_06375 IPR036390 Winged helix DNA-binding domain superfamily DOO79_06385 IPR012675 Beta-grasp domain superfamily DOO79_06385 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain DOO79_06385 IPR017927 FAD-binding domain, ferredoxin reductase-type DOO79_06385 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DOO79_06385 IPR000951 Phthalate dioxygenase reductase DOO79_06385 IPR017938 Riboflavin synthase-like beta-barrel DOO79_06385 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site DOO79_06385 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain DOO79_06385 IPR036010 2Fe-2S ferredoxin-like superfamily DOO79_06390 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily DOO79_06390 IPR017941 Rieske [2Fe-2S] iron-sulphur domain DOO79_06390 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site DOO79_06395 IPR037171 NagB/RpiA transferase-like DOO79_06395 IPR004165 Coenzyme A transferase family I DOO79_06400 IPR004165 Coenzyme A transferase family I DOO79_06400 IPR037171 NagB/RpiA transferase-like DOO79_06405 IPR020613 Thiolase, conserved site DOO79_06405 IPR020617 Thiolase, C-terminal DOO79_06405 IPR012793 Beta-ketoadipyl CoA thiolase DOO79_06405 IPR020616 Thiolase, N-terminal DOO79_06405 IPR016039 Thiolase-like DOO79_06405 IPR020615 Thiolase, acyl-enzyme intermediate active site DOO79_06405 IPR020610 Thiolase, active site DOO79_06405 IPR002155 Thiolase DOO79_06410 IPR015889 Intradiol ring-cleavage dioxygenase, core DOO79_06410 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal DOO79_06410 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit DOO79_06410 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal DOO79_06420 IPR020557 Fumarate lyase, conserved site DOO79_06420 IPR019468 Adenylosuccinate lyase C-terminal DOO79_06420 IPR024083 Fumarase/histidase, N-terminal DOO79_06420 IPR022761 Fumarate lyase, N-terminal DOO79_06420 IPR000362 Fumarate lyase family DOO79_06420 IPR008948 L-Aspartase-like DOO79_06420 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase DOO79_06425 IPR026968 3-oxoadipate enol-lactonase 1/2 DOO79_06425 IPR022742 Serine aminopeptidase, S33 DOO79_06425 IPR029058 Alpha/Beta hydrolase fold DOO79_06425 IPR000073 Alpha/beta hydrolase fold-1 DOO79_06430 IPR012788 4-carboxymuconolactone decarboxylase DOO79_06430 IPR003779 Carboxymuconolactone decarboxylase-like DOO79_06430 IPR029032 AhpD-like DOO79_06440 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_06440 IPR005471 Transcription regulator IclR, N-terminal DOO79_06440 IPR014757 Transcription regulator IclR, C-terminal DOO79_06440 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR DOO79_06440 IPR029016 GAF-like domain superfamily DOO79_06440 IPR036390 Winged helix DNA-binding domain superfamily DOO79_06450 IPR029058 Alpha/Beta hydrolase fold DOO79_06450 IPR013094 Alpha/beta hydrolase fold-3 DOO79_06455 IPR019619 Protein of unknown function DUF2490 DOO79_06460 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related DOO79_06460 IPR026904 GidA associated domain 3 DOO79_06460 IPR036188 FAD/NAD(P)-binding domain superfamily DOO79_06460 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG DOO79_06460 IPR020595 MnmG-related, conserved site DOO79_06470 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DOO79_06470 IPR005789 Threonine dehydratase, catabolic DOO79_06470 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site DOO79_06470 IPR001926 Pyridoxal-phosphate dependent enzyme DOO79_06490 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOO79_06490 IPR041698 Methyltransferase domain 25 DOO79_06490 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC DOO79_06495 IPR036291 NAD(P)-binding domain superfamily DOO79_06495 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOO79_06495 IPR002347 Short-chain dehydrogenase/reductase SDR DOO79_06500 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase DOO79_06500 IPR029058 Alpha/Beta hydrolase fold DOO79_06500 IPR000073 Alpha/beta hydrolase fold-1 DOO79_06510 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria DOO79_06510 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type DOO79_06510 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOO79_06510 IPR004839 Aminotransferase, class I/classII DOO79_06510 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOO79_06510 IPR015424 Pyridoxal phosphate-dependent transferase DOO79_06515 IPR010722 Biotin and thiamin synthesis-associated domain DOO79_06515 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB DOO79_06515 IPR024177 Biotin synthase DOO79_06515 IPR013785 Aldolase-type TIM barrel DOO79_06515 IPR006638 Elp3/MiaB/NifB DOO79_06515 IPR007197 Radical SAM DOO79_06520 IPR029057 Phosphoribosyltransferase-like DOO79_06520 IPR000836 Phosphoribosyltransferase domain DOO79_06520 IPR005222 Competence protein ComF DOO79_06525 IPR006370 4-hydroxybenzoate polyprenyltransferase-like DOO79_06525 IPR000537 UbiA prenyltransferase family DOO79_06525 IPR039653 Prenyltransferase DOO79_06525 IPR030470 UbiA prenyltransferase conserved site DOO79_06555 IPR008718 NolX DOO79_06590 IPR002191 Bacterial export protein family 3 DOO79_06590 IPR006305 Flagellar biosynthesis protein FliQ DOO79_06595 IPR005773 Yop virulence translocation protein R DOO79_06595 IPR005838 Type III secretion system inner membrane P protein DOO79_06610 IPR042194 FHIPEP, domain 1 DOO79_06610 IPR042193 FHIPEP, domain 3 DOO79_06610 IPR042196 FHIPEP, domain 4 DOO79_06610 IPR025505 FHIPEP conserved site DOO79_06610 IPR001712 Type III secretion system FHIPEP DOO79_06615 IPR006307 Type III exporter system, secretion apparatus protein BsaZ DOO79_06615 IPR006135 Type III secretion system substrate exporter DOO79_06615 IPR029025 Type III secretion system substrate exporter, C-terminal DOO79_06630 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ DOO79_06630 IPR006182 Secretory protein YscJ/FliF DOO79_06645 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain DOO79_06645 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site DOO79_06645 IPR003593 AAA+ ATPase domain DOO79_06645 IPR040627 T3SS EscN ATPase, C-terminal DOO79_06645 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_06645 IPR013380 ATPase, type III secretion system, H+-transporting DOO79_06645 IPR005714 ATPase, type III secretion system, FliI/YscN DOO79_06645 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain DOO79_06655 IPR002010 Type III secretion system inner membrane R protein DOO79_06655 IPR006304 Type III secretion protein SpaR/YscT DOO79_06660 IPR005644 NolW-like DOO79_06660 IPR004846 Type II/III secretion system DOO79_06660 IPR004845 Type II secretion system GspD, conserved site DOO79_06660 IPR003522 Type III secretion system outer membrane pore YscC/HrcC DOO79_06660 IPR038591 NolW-like superfamily DOO79_06670 IPR008258 Transglycosylase SLT domain 1 DOO79_06670 IPR023346 Lysozyme-like domain superfamily DOO79_06685 IPR023408 Mechanosensitive ion channel MscS domain superfamily DOO79_06685 IPR025692 Mechanosensitive ion channel inner membrane domain 1 DOO79_06685 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 DOO79_06685 IPR006686 Mechanosensitive ion channel MscS, conserved site DOO79_06685 IPR011066 Mechanosensitive ion channel MscS, C-terminal DOO79_06685 IPR006685 Mechanosensitive ion channel MscS DOO79_06685 IPR010920 LSM domain superfamily DOO79_06685 IPR024393 Mechanosensitive ion channel MscS, porin domain DOO79_06690 IPR020881 Phosphoglycerol transferase I DOO79_06690 IPR017850 Alkaline-phosphatase-like, core domain superfamily DOO79_06690 IPR000917 Sulfatase, N-terminal DOO79_06700 IPR011009 Protein kinase-like domain superfamily DOO79_06700 IPR004147 UbiB domain DOO79_06700 IPR000719 Protein kinase domain DOO79_06705 IPR008526 Inner membrane protein YedI DOO79_06710 IPR001789 Signal transduction response regulator, receiver domain DOO79_06710 IPR029787 Nucleotide cyclase DOO79_06710 IPR000160 GGDEF domain DOO79_06710 IPR011006 CheY-like superfamily DOO79_06715 IPR013534 Starch synthase, catalytic domain DOO79_06715 IPR011835 Bacterial/plant glycogen synthase DOO79_06715 IPR001296 Glycosyl transferase, family 1 DOO79_06720 IPR013780 Glycosyl hydrolase, all-beta DOO79_06720 IPR017853 Glycoside hydrolase superfamily DOO79_06720 IPR013783 Immunoglobulin-like fold DOO79_06720 IPR014756 Immunoglobulin E-set DOO79_06720 IPR006047 Glycosyl hydrolase, family 13, catalytic domain DOO79_06720 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB DOO79_06720 IPR004193 Glycoside hydrolase, family 13, N-terminal DOO79_06720 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta DOO79_06720 IPR037439 1,4-alpha-glucan-branching enzyme DOO79_06725 IPR013780 Glycosyl hydrolase, all-beta DOO79_06725 IPR012768 Malto-oligosyltrehalose trehalohydrolase DOO79_06725 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) DOO79_06725 IPR006047 Glycosyl hydrolase, family 13, catalytic domain DOO79_06725 IPR014756 Immunoglobulin E-set DOO79_06725 IPR013783 Immunoglobulin-like fold DOO79_06725 IPR017853 Glycoside hydrolase superfamily DOO79_06725 IPR004193 Glycoside hydrolase, family 13, N-terminal DOO79_06730 IPR017853 Glycoside hydrolase superfamily DOO79_06730 IPR003385 Glycoside hydrolase, family 77 DOO79_06735 IPR006047 Glycosyl hydrolase, family 13, catalytic domain DOO79_06735 IPR012767 Maltooligosyl trehalose synthase DOO79_06735 IPR017853 Glycoside hydrolase superfamily DOO79_06745 IPR013783 Immunoglobulin-like fold DOO79_06745 IPR014756 Immunoglobulin E-set DOO79_06745 IPR006047 Glycosyl hydrolase, family 13, catalytic domain DOO79_06745 IPR017853 Glycoside hydrolase superfamily DOO79_06745 IPR011837 Glycogen debranching enzyme, GlgX type DOO79_06745 IPR013780 Glycosyl hydrolase, all-beta DOO79_06745 IPR004193 Glycoside hydrolase, family 13, N-terminal DOO79_06750 IPR000534 Semialdehyde dehydrogenase, NAD-binding DOO79_06750 IPR016040 NAD(P)-binding domain DOO79_06750 IPR036291 NAD(P)-binding domain superfamily DOO79_06755 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOO79_06755 IPR036291 NAD(P)-binding domain superfamily DOO79_06755 IPR002347 Short-chain dehydrogenase/reductase SDR DOO79_06770 IPR010694 Uncharacterised protein family VirK DOO79_06775 IPR010131 RND efflux system, outer membrane lipoprotein, NodT DOO79_06775 IPR003423 Outer membrane efflux protein DOO79_06790 IPR001036 Acriflavin resistance protein DOO79_06790 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 DOO79_06790 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DOO79_06795 IPR036291 NAD(P)-binding domain superfamily DOO79_06795 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOO79_06795 IPR002347 Short-chain dehydrogenase/reductase SDR DOO79_06810 IPR014014 RNA helicase, DEAD-box type, Q motif DOO79_06810 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DOO79_06810 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_06810 IPR001650 Helicase, C-terminal DOO79_06810 IPR028622 ATP-dependent RNA helicase RhlE DOO79_06810 IPR011545 DEAD/DEAH box helicase domain DOO79_06810 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOO79_06815 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site DOO79_06815 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain DOO79_06815 IPR000089 Biotin/lipoyl attachment DOO79_06815 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily DOO79_06815 IPR004167 Peripheral subunit-binding domain DOO79_06815 IPR011053 Single hybrid motif DOO79_06815 IPR036625 E3-binding domain superfamily DOO79_06825 IPR029061 Thiamin diphosphate-binding fold DOO79_06825 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II DOO79_06825 IPR033248 Transketolase, C-terminal domain DOO79_06825 IPR005475 Transketolase-like, pyrimidine-binding domain DOO79_06830 IPR001017 Dehydrogenase, E1 component DOO79_06830 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha DOO79_06830 IPR029061 Thiamin diphosphate-binding fold DOO79_06845 IPR004981 Tryptophan 2,3-dioxygenase DOO79_06845 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like DOO79_06850 IPR005279 Dipeptide/tripeptide permease DOO79_06850 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site DOO79_06850 IPR036259 MFS transporter superfamily DOO79_06850 IPR000109 Proton-dependent oligopeptide transporter family DOO79_06850 IPR020846 Major facilitator superfamily domain DOO79_06860 IPR000835 MarR-type HTH domain DOO79_06860 IPR023187 Transcriptional regulator MarR-type, conserved site DOO79_06860 IPR036390 Winged helix DNA-binding domain superfamily DOO79_06860 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_06865 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal DOO79_06865 IPR005956 4-hydroxyphenylpyruvate dioxygenase DOO79_06865 IPR037523 Vicinal oxygen chelate (VOC) domain DOO79_06865 IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal DOO79_06865 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DOO79_06865 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOO79_06875 IPR005708 Homogentisate 1,2-dioxygenase DOO79_06875 IPR022950 Homogentisate 1,2-dioxygenase, bacterial DOO79_06875 IPR014710 RmlC-like jelly roll fold DOO79_06875 IPR011051 RmlC-like cupin domain superfamily DOO79_06895 IPR005133 Na+/H+ antiporter subunit G DOO79_06900 IPR007208 Na(+)/H(+) antiporter subunit F-like DOO79_06910 IPR004775 Na(+)/H(+) antiporter subunit D1 DOO79_06910 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit DOO79_06915 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like DOO79_06915 IPR006673 Mnh complex subunit C1 DOO79_06920 IPR005663 Monovalent cation proton antiporter subunit A DOO79_06920 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit DOO79_06920 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal DOO79_06920 IPR025383 Domain of unknown function DUF4040 DOO79_06920 IPR007182 Na+/H+ antiporter MnhB subunit-related protein DOO79_06920 IPR005281 Monovalent cation:proton antiporter, subunit B DOO79_06935 IPR027268 Peptidase M4/M1, CTD superfamily DOO79_06935 IPR015919 Cadherin-like superfamily DOO79_06935 IPR013856 Peptidase M4 domain DOO79_06935 IPR002884 P domain DOO79_06935 IPR013783 Immunoglobulin-like fold DOO79_06935 IPR001570 Peptidase M4, C-terminal DOO79_06935 IPR006644 Dystroglycan-type cadherin-like DOO79_06935 IPR023612 Peptidase M4 DOO79_06935 IPR011096 FTP domain DOO79_06935 IPR008979 Galactose-binding-like domain superfamily DOO79_06945 IPR023346 Lysozyme-like domain superfamily DOO79_06945 IPR000726 Glycoside hydrolase, family 19, catalytic DOO79_06965 IPR018236 SAICAR synthetase, conserved site DOO79_06965 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase DOO79_06965 IPR028923 SAICAR synthetase/ADE2, N-terminal DOO79_06970 IPR001623 DnaJ domain DOO79_06970 IPR023749 Co-chaperone DjlA DOO79_06970 IPR007791 Co-chaperone DjlA, N-terminal DOO79_06970 IPR036869 Chaperone J-domain superfamily DOO79_06970 IPR029024 TerB-like DOO79_06980 IPR000056 Ribulose-phosphate 3-epimerase-like DOO79_06980 IPR013785 Aldolase-type TIM barrel DOO79_06980 IPR011060 Ribulose-phosphate binding barrel DOO79_06980 IPR026019 Ribulose-phosphate 3-epimerase DOO79_06985 IPR000182 GNAT domain DOO79_06985 IPR016181 Acyl-CoA N-acyltransferase DOO79_06990 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily DOO79_06990 IPR022433 Lipid kinase YegS DOO79_06990 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal DOO79_06990 IPR005218 Diacylglycerol/lipid kinase DOO79_06990 IPR001206 Diacylglycerol kinase, catalytic domain DOO79_06995 IPR006805 Anthranilate synthase component I, N-terminal DOO79_06995 IPR005256 Anthranilate synthase component I, PabB-like DOO79_06995 IPR005801 ADC synthase DOO79_06995 IPR015890 Chorismate-utilising enzyme, C-terminal DOO79_06995 IPR019999 Anthranilate synthase component I-like DOO79_07005 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain DOO79_07005 IPR017926 Glutamine amidotransferase DOO79_07005 IPR029062 Class I glutamine amidotransferase-like DOO79_07015 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily DOO79_07015 IPR005940 Anthranilate phosphoribosyl transferase DOO79_07015 IPR000312 Glycosyl transferase, family 3 DOO79_07015 IPR017459 Glycosyl transferase family 3, N-terminal domain DOO79_07015 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily DOO79_07020 IPR001468 Indole-3-glycerol phosphate synthase, conserved site DOO79_07020 IPR013798 Indole-3-glycerol phosphate synthase DOO79_07020 IPR011060 Ribulose-phosphate binding barrel DOO79_07020 IPR013785 Aldolase-type TIM barrel DOO79_07030 IPR036390 Winged helix DNA-binding domain superfamily DOO79_07030 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_07030 IPR018335 Transcription regulator HTH, Crp-type, conserved site DOO79_07030 IPR014710 RmlC-like jelly roll fold DOO79_07030 IPR018490 Cyclic nucleotide-binding-like DOO79_07030 IPR000595 Cyclic nucleotide-binding domain DOO79_07030 IPR012318 Crp-type HTH domain DOO79_07035 IPR009165 S-adenosylmethionine decarboxylase, bacterial DOO79_07035 IPR016067 S-adenosylmethionine decarboxylase, core DOO79_07035 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic DOO79_07040 IPR000390 Small multidrug resistance protein family DOO79_07045 IPR012347 Ferritin-like DOO79_07045 IPR009078 Ferritin-like superfamily DOO79_07045 IPR011566 Ubiquinone biosynthesis protein Coq7 DOO79_07050 IPR005822 Ribosomal protein L13 DOO79_07050 IPR005823 Ribosomal protein L13, bacterial-type DOO79_07050 IPR023563 Ribosomal protein L13, conserved site DOO79_07050 IPR036899 Ribosomal protein L13 superfamily DOO79_07055 IPR020574 Ribosomal protein S9, conserved site DOO79_07055 IPR023035 Ribosomal protein S9, bacterial/plastid DOO79_07055 IPR000754 Ribosomal protein S9 DOO79_07055 IPR020568 Ribosomal protein S5 domain 2-type fold DOO79_07055 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOO79_07070 IPR020084 NUDIX hydrolase, conserved site DOO79_07070 IPR015797 NUDIX hydrolase-like domain superfamily DOO79_07070 IPR022927 RNA pyrophosphohydrolase RppH DOO79_07070 IPR000086 NUDIX hydrolase domain DOO79_07080 IPR008331 Ferritin/DPS protein domain DOO79_07080 IPR009078 Ferritin-like superfamily DOO79_07080 IPR009040 Ferritin-like diiron domain DOO79_07080 IPR012347 Ferritin-like DOO79_07080 IPR002024 Bacterioferritin DOO79_07085 IPR036641 HPT domain superfamily DOO79_07085 IPR003660 HAMP domain DOO79_07085 IPR011006 CheY-like superfamily DOO79_07085 IPR005467 Histidine kinase domain DOO79_07085 IPR001789 Signal transduction response regulator, receiver domain DOO79_07085 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOO79_07085 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain DOO79_07085 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_07085 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_07085 IPR019247 Histidine kinase BarA, N-terminal DOO79_07085 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_07085 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_07090 IPR001867 OmpR/PhoB-type DNA-binding domain DOO79_07090 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_07090 IPR039420 Transcriptional regulatory protein WalR-like DOO79_07090 IPR011006 CheY-like superfamily DOO79_07090 IPR001789 Signal transduction response regulator, receiver domain DOO79_07110 IPR016092 FeS cluster insertion protein DOO79_07110 IPR017870 FeS cluster insertion, C-terminal, conserved site DOO79_07110 IPR023063 FeS cluster insertion protein ErpA DOO79_07110 IPR035903 HesB-like domain superfamily DOO79_07110 IPR000361 FeS cluster biogenesis DOO79_07125 IPR015375 NADH pyrophosphatase-like, N-terminal DOO79_07125 IPR022925 NADH pyrophosphatase NudC DOO79_07125 IPR015797 NUDIX hydrolase-like domain superfamily DOO79_07125 IPR020084 NUDIX hydrolase, conserved site DOO79_07125 IPR000086 NUDIX hydrolase domain DOO79_07125 IPR015376 Zinc ribbon, NADH pyrophosphatase DOO79_07130 IPR031347 Protein AmpE DOO79_07130 IPR004485 Cobalamin biosynthesis CobD/CbiB DOO79_07150 IPR036259 MFS transporter superfamily DOO79_07150 IPR011701 Major facilitator superfamily DOO79_07150 IPR023727 Lysophospholipid transporter LplT DOO79_07155 IPR005119 LysR, substrate-binding DOO79_07155 IPR000847 Transcription regulator HTH, LysR DOO79_07155 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_07155 IPR036390 Winged helix DNA-binding domain superfamily DOO79_07160 IPR011701 Major facilitator superfamily DOO79_07160 IPR020846 Major facilitator superfamily domain DOO79_07160 IPR036259 MFS transporter superfamily DOO79_07165 IPR032692 Integral membrane protein YccS, N-terminal DOO79_07165 IPR010020 Integral membrane protein, YccS/YhfK DOO79_07165 IPR010019 Integral membrane protein, YccS DOO79_07175 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DOO79_07175 IPR020559 Phosphoribosylglycinamide synthetase, conserved site DOO79_07175 IPR011054 Rudiment single hybrid motif DOO79_07175 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal DOO79_07175 IPR011761 ATP-grasp fold DOO79_07175 IPR013815 ATP-grasp fold, subdomain 1 DOO79_07175 IPR016185 Pre-ATP-grasp domain superfamily DOO79_07175 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily DOO79_07175 IPR020560 Phosphoribosylglycinamide synthetase, C-domain DOO79_07175 IPR000115 Phosphoribosylglycinamide synthetase DOO79_07185 IPR011607 Methylglyoxal synthase-like domain DOO79_07185 IPR024051 AICAR transformylase, duplicated domain superfamily DOO79_07185 IPR016193 Cytidine deaminase-like DOO79_07185 IPR002695 Bifunctional purine biosynthesis protein PurH-like DOO79_07185 IPR036914 Methylglyoxal synthase-like domain superfamily DOO79_07190 IPR000462 CDP-alcohol phosphatidyltransferase DOO79_07195 IPR029058 Alpha/Beta hydrolase fold DOO79_07195 IPR022744 Methyltransferase domain, putative DOO79_07195 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOO79_07195 IPR022742 Serine aminopeptidase, S33 DOO79_07200 IPR020422 Dual specificity protein phosphatase domain DOO79_07200 IPR000340 Dual specificity phosphatase, catalytic domain DOO79_07200 IPR029021 Protein-tyrosine phosphatase-like DOO79_07200 IPR003595 Protein-tyrosine phosphatase, catalytic DOO79_07200 IPR000387 Tyrosine specific protein phosphatases domain DOO79_07200 IPR016130 Protein-tyrosine phosphatase, active site DOO79_07225 IPR000374 Phosphatidate cytidylyltransferase DOO79_07230 IPR002197 DNA binding HTH domain, Fis-type DOO79_07230 IPR005412 DNA-binding protein Fis DOO79_07230 IPR009057 Homeobox-like domain superfamily DOO79_07245 IPR001387 Cro/C1-type helix-turn-helix domain DOO79_07245 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOO79_07255 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOO79_07255 IPR004498 Ribosomal protein L11 methyltransferase DOO79_07275 IPR013815 ATP-grasp fold, subdomain 1 DOO79_07275 IPR011054 Rudiment single hybrid motif DOO79_07275 IPR011761 ATP-grasp fold DOO79_07275 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase DOO79_07275 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain DOO79_07275 IPR016185 Pre-ATP-grasp domain superfamily DOO79_07275 IPR005482 Biotin carboxylase, C-terminal DOO79_07275 IPR011764 Biotin carboxylation domain DOO79_07275 IPR005481 Biotin carboxylase-like, N-terminal domain DOO79_07285 IPR001249 Acetyl-CoA biotin carboxyl carrier DOO79_07285 IPR000089 Biotin/lipoyl attachment DOO79_07285 IPR011053 Single hybrid motif DOO79_07285 IPR001882 Biotin-binding site DOO79_07290 IPR001874 Dehydroquinase, class II DOO79_07290 IPR018509 Dehydroquinase, class II, conserved site DOO79_07290 IPR036441 Dehydroquinase, class II superfamily DOO79_07295 IPR036249 Thioredoxin-like superfamily DOO79_07295 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain DOO79_07295 IPR035671 DsbD gamma DOO79_07295 IPR013766 Thioredoxin domain DOO79_07295 IPR003834 Cytochrome C biogenesis protein, transmembrane domain DOO79_07295 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily DOO79_07295 IPR022910 Thiol:disulphide interchange protein DsbD DOO79_07300 IPR004323 Divalent ion tolerance protein, CutA DOO79_07300 IPR023700 Divalent cation tolerance protein CutA, Enterobacteria DOO79_07300 IPR011322 Nitrogen regulatory PII-like, alpha/beta DOO79_07300 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DOO79_07315 IPR002913 START domain DOO79_07315 IPR028347 START domain-containing protein DOO79_07315 IPR023393 START-like domain superfamily DOO79_07330 IPR036291 NAD(P)-binding domain superfamily DOO79_07330 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOO79_07330 IPR002347 Short-chain dehydrogenase/reductase SDR DOO79_07340 IPR007346 Endonuclease I DOO79_07345 IPR037124 GroES chaperonin superfamily DOO79_07345 IPR018369 Chaperonin GroES, conserved site DOO79_07345 IPR011032 GroES-like superfamily DOO79_07345 IPR020818 GroES chaperonin family DOO79_07350 IPR027413 GroEL-like equatorial domain superfamily DOO79_07350 IPR027409 GroEL-like apical domain superfamily DOO79_07350 IPR018370 Chaperonin Cpn60, conserved site DOO79_07350 IPR001844 Chaperonin Cpn60 DOO79_07350 IPR002423 Chaperonin Cpn60/TCP-1 family DOO79_07350 IPR027410 TCP-1-like chaperonin intermediate domain superfamily DOO79_07360 IPR000531 TonB-dependent receptor-like, beta-barrel DOO79_07360 IPR037066 TonB-dependent receptor, plug domain superfamily DOO79_07360 IPR012910 TonB-dependent receptor, plug domain DOO79_07360 IPR039426 Vitamin B12 transporter BtuB-like DOO79_07360 IPR010916 TonB box, conserved site DOO79_07360 IPR010101 TonB-dependent vitamin B12 transporter BtuB DOO79_07360 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DOO79_07360 IPR010917 TonB-dependent receptor, conserved site DOO79_07365 IPR013785 Aldolase-type TIM barrel DOO79_07365 IPR006218 DAHP synthetase I/KDSA DOO79_07365 IPR006219 DHAP synthase, class 1 DOO79_07380 IPR005511 Senescence marker protein-30 (SMP-30) DOO79_07380 IPR011042 Six-bladed beta-propeller, TolB-like DOO79_07380 IPR006311 Twin-arginine translocation pathway, signal sequence DOO79_07380 IPR013658 SMP-30/Gluconolactonase/LRE-like region DOO79_07395 IPR003744 Queuosine precursor transporter DOO79_07415 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE DOO79_07415 IPR000415 Nitroreductase-like DOO79_07415 IPR029479 Nitroreductase DOO79_07420 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily DOO79_07420 IPR023480 Uncharacterised protein family UPF0312/YceI DOO79_07420 IPR007372 Lipid/polyisoprenoid-binding, YceI-like DOO79_07445 IPR037171 NagB/RpiA transferase-like DOO79_07445 IPR005777 Acetyl-S-ACP:malonate ACP transferase DOO79_07450 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein DOO79_07450 IPR009662 Malonate decarboxylase delta subunit DOO79_07455 IPR034733 Acetyl-CoA carboxylase DOO79_07455 IPR029045 ClpP/crotonase-like domain superfamily DOO79_07455 IPR017556 Biotin-independent malonate decarboxylase, beta subunit DOO79_07455 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal DOO79_07465 IPR017557 Phosphoribosyl-dephospho-CoA transferase DOO79_07485 IPR011711 GntR, C-terminal DOO79_07485 IPR008920 Transcription regulator FadR/GntR, C-terminal DOO79_07485 IPR000524 Transcription regulator HTH, GntR DOO79_07485 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_07485 IPR036390 Winged helix DNA-binding domain superfamily DOO79_07485 IPR000485 AsnC-type HTH domain DOO79_07490 IPR006439 HAD hydrolase, subfamily IA DOO79_07490 IPR036412 HAD-like superfamily DOO79_07490 IPR041492 Haloacid dehalogenase-like hydrolase DOO79_07490 IPR037512 Phosphoglycolate phosphatase, prokaryotic DOO79_07490 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic DOO79_07490 IPR023214 HAD superfamily DOO79_07490 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DOO79_07520 IPR011683 Glycosyl hydrolase family 53 DOO79_07520 IPR017853 Glycoside hydrolase superfamily DOO79_07525 IPR041621 Pyruvate dehydrogenase E1 component, middle domain DOO79_07525 IPR029061 Thiamin diphosphate-binding fold DOO79_07525 IPR004660 Pyruvate dehydrogenase E1 component DOO79_07525 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal DOO79_07525 IPR005474 Transketolase, N-terminal DOO79_07525 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II DOO79_07560 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOO79_07560 IPR002347 Short-chain dehydrogenase/reductase SDR DOO79_07560 IPR036291 NAD(P)-binding domain superfamily DOO79_07575 IPR002347 Short-chain dehydrogenase/reductase SDR DOO79_07575 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOO79_07575 IPR036291 NAD(P)-binding domain superfamily DOO79_07590 IPR010987 Glutathione S-transferase, C-terminal-like DOO79_07590 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DOO79_07590 IPR004045 Glutathione S-transferase, N-terminal DOO79_07590 IPR016639 Glutathione S-transferase Omega/GSH DOO79_07590 IPR036249 Thioredoxin-like superfamily DOO79_07590 IPR040079 Glutathione Transferase family DOO79_07615 IPR000731 Sterol-sensing domain DOO79_07615 IPR023845 Domain of unknown function DUF3817, transmembrane DOO79_07615 IPR004869 Membrane transport protein MMPL domain DOO79_07625 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily DOO79_07625 IPR002469 Dipeptidylpeptidase IV, N-terminal domain DOO79_07625 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain DOO79_07625 IPR029058 Alpha/Beta hydrolase fold DOO79_07635 IPR011673 Protein of unknown function DUF1615 DOO79_07645 IPR007894 MASE2 DOO79_07645 IPR000160 GGDEF domain DOO79_07645 IPR029787 Nucleotide cyclase DOO79_07670 IPR000620 EamA domain DOO79_07675 IPR037298 Cyclohexadienyl dehydratase pheC DOO79_07675 IPR018313 Solute-binding protein family 3, conserved site DOO79_07675 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DOO79_07685 IPR004841 Amino acid permease/ SLC12A domain DOO79_07685 IPR004840 Amino acid permease, conserved site DOO79_07695 IPR004488 Magnesium/cobalt transport protein CorA DOO79_07695 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB DOO79_07705 IPR018232 Glycoside hydrolase, family 37, conserved site DOO79_07705 IPR008928 Six-hairpin glycosidase superfamily DOO79_07705 IPR012341 Six-hairpin glycosidase-like superfamily DOO79_07705 IPR001661 Glycoside hydrolase, family 37 DOO79_07705 IPR023720 Trehalase, periplasmic DOO79_07755 IPR001633 EAL domain DOO79_07755 IPR035919 EAL domain superfamily DOO79_07755 IPR013655 PAS fold-3 DOO79_07755 IPR029787 Nucleotide cyclase DOO79_07755 IPR001610 PAC motif DOO79_07755 IPR035965 PAS domain superfamily DOO79_07755 IPR000014 PAS domain DOO79_07755 IPR000700 PAS-associated, C-terminal DOO79_07755 IPR013656 PAS fold-4 DOO79_07755 IPR000160 GGDEF domain DOO79_07765 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DOO79_07765 IPR003660 HAMP domain DOO79_07765 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DOO79_07765 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DOO79_07765 IPR004090 Chemotaxis methyl-accepting receptor DOO79_07765 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DOO79_07770 IPR001919 Carbohydrate-binding type-2 domain DOO79_07770 IPR017853 Glycoside hydrolase superfamily DOO79_07770 IPR001547 Glycoside hydrolase, family 5 DOO79_07770 IPR018087 Glycoside hydrolase, family 5, conserved site DOO79_07770 IPR012291 CBM2, carbohydrate-binding domain superfamily DOO79_07770 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily DOO79_07775 IPR002645 STAS domain DOO79_07775 IPR036513 STAS domain superfamily DOO79_07775 IPR011547 SLC26A/SulP transporter domain DOO79_07775 IPR018045 Sulphate anion transporter, conserved site DOO79_07775 IPR001902 SLC26A/SulP transporter DOO79_07785 IPR013656 PAS fold-4 DOO79_07785 IPR035965 PAS domain superfamily DOO79_07785 IPR000700 PAS-associated, C-terminal DOO79_07785 IPR000014 PAS domain DOO79_07785 IPR029787 Nucleotide cyclase DOO79_07785 IPR000160 GGDEF domain DOO79_07805 IPR029044 Nucleotide-diphospho-sugar transferases DOO79_07805 IPR023725 Glucan biosynthesis glucosyltransferase H DOO79_07805 IPR001173 Glycosyltransferase 2-like DOO79_07815 IPR003018 GAF domain DOO79_07815 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region DOO79_07815 IPR010559 Signal transduction histidine kinase, internal region DOO79_07815 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_07820 IPR011006 CheY-like superfamily DOO79_07820 IPR001789 Signal transduction response regulator, receiver domain DOO79_07820 IPR007492 LytTR DNA-binding domain DOO79_07825 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site DOO79_07825 IPR022418 Porphobilinogen deaminase, C-terminal DOO79_07825 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily DOO79_07825 IPR022417 Porphobilinogen deaminase, N-terminal DOO79_07825 IPR000860 Porphobilinogen deaminase DOO79_07865 IPR002470 Peptidase S9A, prolyl oligopeptidase DOO79_07865 IPR023302 Peptidase S9A, N-terminal domain DOO79_07865 IPR029058 Alpha/Beta hydrolase fold DOO79_07865 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain DOO79_07875 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site DOO79_07875 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOO79_07875 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOO79_07875 IPR004839 Aminotransferase, class I/classII DOO79_07875 IPR015424 Pyridoxal phosphate-dependent transferase DOO79_07880 IPR002470 Peptidase S9A, prolyl oligopeptidase DOO79_07880 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain DOO79_07880 IPR023302 Peptidase S9A, N-terminal domain DOO79_07880 IPR029058 Alpha/Beta hydrolase fold DOO79_07885 IPR007401 Protein of unknown function DUF454 DOO79_07895 IPR018510 Diaminopimelate epimerase, active site DOO79_07895 IPR001653 Diaminopimelate epimerase, DapF DOO79_07905 IPR002104 Integrase, catalytic domain DOO79_07905 IPR011010 DNA breaking-rejoining enzyme, catalytic core DOO79_07905 IPR023009 Tyrosine recombinase XerC/XerD DOO79_07905 IPR013762 Integrase-like, catalytic domain superfamily DOO79_07905 IPR010998 Integrase/recombinase, N-terminal DOO79_07905 IPR004107 Integrase, SAM-like, N-terminal DOO79_07905 IPR011931 Tyrosine recombinase XerC DOO79_07910 IPR023333 Proteasome B-type subunit DOO79_07910 IPR001353 Proteasome, subunit alpha/beta DOO79_07910 IPR029055 Nucleophile aminohydrolases, N-terminal DOO79_07910 IPR022281 ATP-dependent protease, HslV subunit DOO79_07915 IPR004491 Heat shock protein HslU DOO79_07915 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_07915 IPR003593 AAA+ ATPase domain DOO79_07915 IPR003959 ATPase, AAA-type, core DOO79_07915 IPR019489 Clp ATPase, C-terminal DOO79_07925 IPR016181 Acyl-CoA N-acyltransferase DOO79_07925 IPR000182 GNAT domain DOO79_07930 IPR039562 Membrane fusion protein, biotin-lipoyl like domain DOO79_07940 IPR023576 UbiE/COQ5 methyltransferase, conserved site DOO79_07940 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOO79_07940 IPR004033 UbiE/COQ5 methyltransferase DOO79_07945 IPR033422 Gammaproteobacterial periplasmic sensor domain GAPES2 DOO79_07945 IPR029787 Nucleotide cyclase DOO79_07945 IPR000160 GGDEF domain DOO79_07950 IPR014782 Peptidase M1, membrane alanine aminopeptidase DOO79_07950 IPR042097 Aminopeptidase N-like , N-terminal DOO79_07950 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase DOO79_07950 IPR024571 ERAP1-like C-terminal domain DOO79_07950 IPR034016 Aminopeptidase N-type DOO79_07985 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain DOO79_07985 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_07985 IPR010914 RsgA GTPase domain DOO79_07985 IPR004881 Ribosome biogenesis GTPase RsgA DOO79_08000 IPR006047 Glycosyl hydrolase, family 13, catalytic domain DOO79_08000 IPR013780 Glycosyl hydrolase, all-beta DOO79_08000 IPR017853 Glycoside hydrolase superfamily DOO79_08010 IPR018043 Sodium:galactoside symporter, conserved site DOO79_08010 IPR039672 Lactose permease-like DOO79_08010 IPR036259 MFS transporter superfamily DOO79_08015 IPR000843 LacI-type HTH domain DOO79_08015 IPR023588 Transcription regulator HTH, PurR DOO79_08015 IPR028082 Periplasmic binding protein-like I DOO79_08015 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOO79_08020 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOO79_08020 IPR036291 NAD(P)-binding domain superfamily DOO79_08020 IPR002347 Short-chain dehydrogenase/reductase SDR DOO79_08020 IPR011283 Acetoacetyl-CoA reductase DOO79_08025 IPR004680 Citrate transporter-like domain DOO79_08025 IPR014738 Citrate transporter DOO79_08040 IPR001867 OmpR/PhoB-type DNA-binding domain DOO79_08040 IPR011006 CheY-like superfamily DOO79_08040 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_08040 IPR039420 Transcriptional regulatory protein WalR-like DOO79_08040 IPR001789 Signal transduction response regulator, receiver domain DOO79_08040 IPR016032 Signal transduction response regulator, C-terminal effector DOO79_08045 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_08045 IPR013727 Two-component sensor kinase, N-terminal DOO79_08045 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_08045 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOO79_08045 IPR005467 Histidine kinase domain DOO79_08045 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_08045 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_08060 IPR011006 CheY-like superfamily DOO79_08060 IPR016032 Signal transduction response regulator, C-terminal effector DOO79_08060 IPR000792 Transcription regulator LuxR, C-terminal DOO79_08060 IPR001789 Signal transduction response regulator, receiver domain DOO79_08080 IPR036812 NADP-dependent oxidoreductase domain superfamily DOO79_08080 IPR023210 NADP-dependent oxidoreductase domain DOO79_08090 IPR036390 Winged helix DNA-binding domain superfamily DOO79_08090 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_08090 IPR000847 Transcription regulator HTH, LysR DOO79_08090 IPR005119 LysR, substrate-binding DOO79_08100 IPR005829 Sugar transporter, conserved site DOO79_08100 IPR004736 MFS transporter, metabolite:H symporter DOO79_08100 IPR036259 MFS transporter superfamily DOO79_08100 IPR020846 Major facilitator superfamily domain DOO79_08100 IPR011701 Major facilitator superfamily DOO79_08110 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_08110 IPR029151 Periplasmic sensor-like domain superfamily DOO79_08110 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_08110 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOO79_08110 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_08110 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_08110 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) DOO79_08110 IPR033479 Double Cache domain 1 DOO79_08110 IPR005467 Histidine kinase domain DOO79_08120 IPR023954 C4-dicarboxylate transport protein DOO79_08120 IPR001991 Sodium:dicarboxylate symporter DOO79_08120 IPR018107 Sodium:dicarboxylate symporter, conserved site DOO79_08120 IPR036458 Sodium:dicarboxylate symporter superfamily DOO79_08125 IPR042112 Phosphate acetyltransferase, domain 2 DOO79_08125 IPR002505 Phosphate acetyl/butaryl transferase DOO79_08125 IPR037062 Malic enzyme, N-terminal domain superfamily DOO79_08125 IPR012188 NAD(P)-dependent malic enzyme DOO79_08125 IPR015884 Malic enzyme, conserved site DOO79_08125 IPR012301 Malic enzyme, N-terminal domain DOO79_08125 IPR036291 NAD(P)-binding domain superfamily DOO79_08125 IPR042113 Phosphate acetyltransferase, domain 1 DOO79_08125 IPR012302 Malic enzyme, NAD-binding DOO79_08150 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase DOO79_08150 IPR004960 Bacterial lipid A biosynthesis acyltransferase DOO79_08155 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal DOO79_08155 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily DOO79_08155 IPR039901 3-deoxy-D-manno-octulosonic acid transferase DOO79_08160 IPR010130 Type I secretion outer membrane protein, TolC DOO79_08160 IPR003423 Outer membrane efflux protein DOO79_08165 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOO79_08165 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase DOO79_08175 IPR033416 Periplasmic sensor domain CHASE7 DOO79_08175 IPR000160 GGDEF domain DOO79_08175 IPR029787 Nucleotide cyclase DOO79_08180 IPR000847 Transcription regulator HTH, LysR DOO79_08180 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_08180 IPR036390 Winged helix DNA-binding domain superfamily DOO79_08185 IPR018136 Aconitase family, 4Fe-4S cluster binding site DOO79_08185 IPR036008 Aconitase, iron-sulfur domain DOO79_08185 IPR033941 3-Isopropylmalate dehydratase, catalytic domain DOO79_08185 IPR004430 3-isopropylmalate dehydratase, large subunit DOO79_08185 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 DOO79_08185 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain DOO79_08190 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain DOO79_08190 IPR033940 3-isopropylmalate dehydratase, swivel domain DOO79_08190 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel DOO79_08190 IPR004431 3-isopropylmalate dehydratase, small subunit DOO79_08195 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site DOO79_08195 IPR024084 Isopropylmalate dehydrogenase-like domain DOO79_08195 IPR004429 Isopropylmalate dehydrogenase DOO79_08200 IPR013785 Aldolase-type TIM barrel DOO79_08200 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily DOO79_08200 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain DOO79_08200 IPR005671 2-isopropylmalate synthase, bacterial-type DOO79_08200 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site DOO79_08200 IPR000891 Pyruvate carboxyltransferase DOO79_08205 IPR001926 Pyridoxal-phosphate dependent enzyme DOO79_08205 IPR005789 Threonine dehydratase, catabolic DOO79_08205 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site DOO79_08205 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DOO79_08215 IPR029035 DHS-like NAD/FAD-binding domain superfamily DOO79_08215 IPR039368 Acetolactate synthase large subunit, TPP binding domain DOO79_08215 IPR000399 TPP-binding enzyme, conserved site DOO79_08215 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding DOO79_08215 IPR012846 Acetolactate synthase, large subunit, biosynthetic DOO79_08215 IPR029061 Thiamin diphosphate-binding fold DOO79_08215 IPR012000 Thiamine pyrophosphate enzyme, central domain DOO79_08215 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain DOO79_08220 IPR013116 Ketol-acid reductoisomerase, N-terminal DOO79_08220 IPR000506 Ketol-acid reductoisomerase, C-terminal DOO79_08220 IPR013023 Ketol-acid reductoisomerase DOO79_08220 IPR014359 Ketol-acid reductoisomerase, prokaryotic DOO79_08220 IPR036291 NAD(P)-binding domain superfamily DOO79_08220 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOO79_08230 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DOO79_08230 IPR004090 Chemotaxis methyl-accepting receptor DOO79_08230 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DOO79_08230 IPR003660 HAMP domain DOO79_08230 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DOO79_08230 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DOO79_08235 IPR039426 Vitamin B12 transporter BtuB-like DOO79_08235 IPR037066 TonB-dependent receptor, plug domain superfamily DOO79_08235 IPR000531 TonB-dependent receptor-like, beta-barrel DOO79_08235 IPR010916 TonB box, conserved site DOO79_08235 IPR010101 TonB-dependent vitamin B12 transporter BtuB DOO79_08235 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DOO79_08235 IPR010917 TonB-dependent receptor, conserved site DOO79_08235 IPR012910 TonB-dependent receptor, plug domain DOO79_08245 IPR037509 Phosphomethylpyrimidine synthase DOO79_08245 IPR038521 ThiC/Bza superfamily DOO79_08245 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B DOO79_08245 IPR025747 ThiC-associated domain DOO79_08250 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_08250 IPR016032 Signal transduction response regulator, C-terminal effector DOO79_08250 IPR040970 CadC C-terminal domain 1 DOO79_08250 IPR039420 Transcriptional regulatory protein WalR-like DOO79_08250 IPR001867 OmpR/PhoB-type DNA-binding domain DOO79_08250 IPR011990 Tetratricopeptide-like helical domain superfamily DOO79_08255 IPR018060 DNA binding HTH domain, AraC-type DOO79_08255 IPR029062 Class I glutamine amidotransferase-like DOO79_08255 IPR009057 Homeobox-like domain superfamily DOO79_08255 IPR018062 HTH domain AraC-type, conserved site DOO79_08255 IPR020449 Transcription regulator HTH, AraC- type DOO79_08280 IPR008162 Inorganic pyrophosphatase DOO79_08280 IPR036649 Inorganic pyrophosphatase superfamily DOO79_08290 IPR004131 Pyrophosphate-energised proton pump DOO79_08315 IPR033690 Adenylate kinase, conserved site DOO79_08315 IPR000850 Adenylate kinase/UMP-CMP kinase DOO79_08315 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_08320 IPR000713 Mur ligase, N-terminal catalytic domain DOO79_08320 IPR004101 Mur ligase, C-terminal DOO79_08320 IPR036615 Mur ligase, C-terminal domain superfamily DOO79_08320 IPR036565 Mur-like, catalytic domain superfamily DOO79_08320 IPR013221 Mur ligase, central DOO79_08320 IPR005757 Murein peptide ligase DOO79_08330 IPR021134 Bestrophin/UPF0187 DOO79_08335 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DOO79_08335 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily DOO79_08345 IPR036291 NAD(P)-binding domain superfamily DOO79_08345 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOO79_08345 IPR002347 Short-chain dehydrogenase/reductase SDR DOO79_08355 IPR028325 Voltage-gated potassium channel DOO79_08355 IPR014710 RmlC-like jelly roll fold DOO79_08355 IPR000595 Cyclic nucleotide-binding domain DOO79_08355 IPR018488 Cyclic nucleotide-binding, conserved site DOO79_08355 IPR005821 Ion transport domain DOO79_08355 IPR018490 Cyclic nucleotide-binding-like DOO79_08360 IPR004636 Acetylornithine/Succinylornithine transaminase family DOO79_08360 IPR015424 Pyridoxal phosphate-dependent transferase DOO79_08360 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOO79_08360 IPR005814 Aminotransferase class-III DOO79_08360 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOO79_08375 IPR014105 Carotenoid/retinoid oxidoreductase DOO79_08375 IPR036188 FAD/NAD(P)-binding domain superfamily DOO79_08375 IPR002937 Amine oxidase DOO79_08380 IPR009056 Cytochrome c-like domain DOO79_08380 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit DOO79_08380 IPR036909 Cytochrome c-like domain superfamily DOO79_08390 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOO79_08390 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOO79_08390 IPR015424 Pyridoxal phosphate-dependent transferase DOO79_08390 IPR004839 Aminotransferase, class I/classII DOO79_08390 IPR005861 Histidinol-phosphate aminotransferase family DOO79_08395 IPR014068 Azurin DOO79_08395 IPR008972 Cupredoxin DOO79_08395 IPR028871 Blue (type 1) copper protein, binding site DOO79_08395 IPR000923 Blue (type 1) copper domain DOO79_08400 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_08400 IPR000792 Transcription regulator LuxR, C-terminal DOO79_08400 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_08400 IPR023768 Transcriptional regulator HTH-type, MalT DOO79_08400 IPR041617 MalT-like TPR region DOO79_08400 IPR016032 Signal transduction response regulator, C-terminal effector DOO79_08400 IPR011990 Tetratricopeptide-like helical domain superfamily DOO79_08405 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOO79_08405 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOO79_08405 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase DOO79_08405 IPR015424 Pyridoxal phosphate-dependent transferase DOO79_08405 IPR005814 Aminotransferase class-III DOO79_08420 IPR034291 Thiamine phosphate synthase DOO79_08420 IPR022998 Thiamine phosphate synthase/TenI DOO79_08420 IPR036206 Thiamin phosphate synthase superfamily DOO79_08420 IPR013785 Aldolase-type TIM barrel DOO79_08425 IPR024934 Rubredoxin-like domain DOO79_08425 IPR024935 Rubredoxin domain DOO79_08425 IPR018527 Rubredoxin, iron-binding site DOO79_08425 IPR024922 Rubredoxin DOO79_08430 IPR032698 Protein SirB1, N-terminal DOO79_08430 IPR013026 Tetratricopeptide repeat-containing domain DOO79_08430 IPR019734 Tetratricopeptide repeat DOO79_08430 IPR011990 Tetratricopeptide-like helical domain superfamily DOO79_08440 IPR004788 Ribose 5-phosphate isomerase, type A DOO79_08440 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup DOO79_08440 IPR037171 NagB/RpiA transferase-like DOO79_08450 IPR002698 5-formyltetrahydrofolate cyclo-ligase DOO79_08450 IPR037171 NagB/RpiA transferase-like DOO79_08450 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily DOO79_08460 IPR036192 Cell division protein ZapA-like superfamily DOO79_08460 IPR007838 Cell division protein ZapA-like DOO79_08470 IPR036255 YgfB-like superfamily DOO79_08470 IPR011978 Uncharacterised protein family UPF0149 DOO79_08475 IPR000994 Peptidase M24 DOO79_08475 IPR036005 Creatinase/aminopeptidase-like DOO79_08475 IPR001714 Peptidase M24, methionine aminopeptidase DOO79_08475 IPR007865 Aminopeptidase P, N-terminal DOO79_08475 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site DOO79_08475 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DOO79_08485 IPR000994 Peptidase M24 DOO79_08485 IPR022846 Xaa-Pro dipeptidase DOO79_08485 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DOO79_08485 IPR036005 Creatinase/aminopeptidase-like DOO79_08485 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site DOO79_08500 IPR004559 Heme chaperone HemW-like DOO79_08500 IPR034505 Anaerobic coproporphyrinogen-III oxidase DOO79_08500 IPR006638 Elp3/MiaB/NifB DOO79_08500 IPR010723 HemN, C-terminal DOO79_08500 IPR007197 Radical SAM DOO79_08500 IPR023404 Radical SAM, alpha/beta horseshoe DOO79_08505 IPR029001 Inosine triphosphate pyrophosphatase-like DOO79_08505 IPR020922 dITP/XTP pyrophosphatase DOO79_08505 IPR002637 Ham1-like protein DOO79_08515 IPR015847 Exoribonuclease, phosphorolytic domain 2 DOO79_08515 IPR036345 Exoribonuclease, PH domain 2 superfamily DOO79_08515 IPR027408 PNPase/RNase PH domain superfamily DOO79_08515 IPR020568 Ribosomal protein S5 domain 2-type fold DOO79_08515 IPR002381 Ribonuclease PH, bacterial-type DOO79_08515 IPR018336 Ribonuclease PH, conserved site DOO79_08515 IPR001247 Exoribonuclease, phosphorolytic domain 1 DOO79_08520 IPR013551 Domain of unknown function DUF1732 DOO79_08520 IPR005229 Conserved hypothetical protein CHP00255 DOO79_08520 IPR013527 YicC-like, N-terminal DOO79_08525 IPR008145 Guanylate kinase/L-type calcium channel beta subunit DOO79_08525 IPR008144 Guanylate kinase-like domain DOO79_08525 IPR017665 Guanylate kinase DOO79_08525 IPR020590 Guanylate kinase, conserved site DOO79_08525 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_08530 IPR036161 RPB6/omega subunit-like superfamily DOO79_08530 IPR012293 RNA polymerase subunit, RPB6/omega DOO79_08530 IPR003716 DNA-directed RNA polymerase, omega subunit DOO79_08530 IPR006110 RNA polymerase, subunit omega/K/RPB6 DOO79_08535 IPR033676 Autoinducer-2 kinase DOO79_08535 IPR000577 Carbohydrate kinase, FGGY DOO79_08535 IPR018485 Carbohydrate kinase, FGGY, C-terminal DOO79_08535 IPR018484 Carbohydrate kinase, FGGY, N-terminal DOO79_08540 IPR002347 Short-chain dehydrogenase/reductase SDR DOO79_08540 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOO79_08540 IPR036291 NAD(P)-binding domain superfamily DOO79_08545 IPR003593 AAA+ ATPase domain DOO79_08545 IPR003439 ABC transporter-like DOO79_08545 IPR017871 ABC transporter, conserved site DOO79_08545 IPR008995 Molybdate/tungstate binding, C-terminal DOO79_08545 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_08545 IPR013611 Transport-associated OB, type 2 DOO79_08550 IPR035906 MetI-like superfamily DOO79_08550 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOO79_08555 IPR035906 MetI-like superfamily DOO79_08555 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOO79_08560 IPR007049 Carbohydrate-selective porin OprB DOO79_08560 IPR038673 Carbohydrate-selective porin OprB superfamily DOO79_08575 IPR037171 NagB/RpiA transferase-like DOO79_08575 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_08575 IPR007324 Sugar-binding domain, putative DOO79_08580 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DOO79_08580 IPR023214 HAD superfamily DOO79_08580 IPR041492 Haloacid dehalogenase-like hydrolase DOO79_08580 IPR006439 HAD hydrolase, subfamily IA DOO79_08580 IPR036412 HAD-like superfamily DOO79_08585 IPR002912 ACT domain DOO79_08585 IPR012675 Beta-grasp domain superfamily DOO79_08585 IPR003607 HD/PDEase domain DOO79_08585 IPR004811 RelA/SpoT family DOO79_08585 IPR007685 RelA/SpoT DOO79_08585 IPR004095 TGS DOO79_08585 IPR012676 TGS-like DOO79_08585 IPR033655 RelA, TGS domain DOO79_08590 IPR019897 RidA, conserved site DOO79_08590 IPR006175 YjgF/YER057c/UK114 family DOO79_08590 IPR035959 RutC-like superfamily DOO79_08590 IPR006056 RidA family DOO79_08595 IPR004609 ATP-dependent DNA helicase RecG DOO79_08595 IPR011545 DEAD/DEAH box helicase domain DOO79_08595 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOO79_08595 IPR001650 Helicase, C-terminal DOO79_08595 IPR012340 Nucleic acid-binding, OB-fold DOO79_08595 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_08595 IPR033454 RecG, wedge domain DOO79_08600 IPR036452 Ribonucleoside hydrolase-like DOO79_08600 IPR023186 Inosine/uridine-preferring nucleoside hydrolase DOO79_08600 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain DOO79_08600 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site DOO79_08600 IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA DOO79_08605 IPR034704 L28p-like DOO79_08605 IPR002150 Ribosomal protein L31 DOO79_08605 IPR027493 Ribosomal protein L31 type B DOO79_08605 IPR042105 Ribosomal protein L31 superfamily DOO79_08610 IPR036969 Citrate synthase superfamily DOO79_08610 IPR019810 Citrate synthase active site DOO79_08610 IPR024176 Citrate synthase, bacterial-type DOO79_08610 IPR002020 Citrate synthase DOO79_08610 IPR016143 Citrate synthase-like, small alpha subdomain DOO79_08610 IPR016142 Citrate synthase-like, large alpha subdomain DOO79_08610 IPR010953 Citrate synthase, type I DOO79_08625 IPR012338 Beta-lactamase/transpeptidase-like DOO79_08625 IPR031376 Penicillin-binding protein, OB-like domain DOO79_08625 IPR036950 Penicillin binding protein transglycosylase domain DOO79_08625 IPR023346 Lysozyme-like domain superfamily DOO79_08625 IPR001460 Penicillin-binding protein, transpeptidase DOO79_08625 IPR001264 Glycosyl transferase, family 51 DOO79_08655 IPR041628 ChlI/MoxR, AAA lid domain DOO79_08655 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_08655 IPR011703 ATPase, AAA-3 DOO79_08675 IPR024163 Aerotolerance regulator, N-terminal DOO79_08675 IPR022933 Uncharacterised protein family UPF0353 DOO79_08675 IPR002035 von Willebrand factor, type A DOO79_08675 IPR036465 von Willebrand factor A-like domain superfamily DOO79_08690 IPR036458 Sodium:dicarboxylate symporter superfamily DOO79_08690 IPR018107 Sodium:dicarboxylate symporter, conserved site DOO79_08690 IPR033380 Glutamate-aspartate symport protein GltP/GltT DOO79_08690 IPR034703 Proton/glutamate-aspartate symporter GltP DOO79_08690 IPR001991 Sodium:dicarboxylate symporter DOO79_08695 IPR020826 Transketolase binding site DOO79_08695 IPR033248 Transketolase, C-terminal domain DOO79_08695 IPR033247 Transketolase family DOO79_08695 IPR005478 Transketolase, bacterial-like DOO79_08695 IPR029061 Thiamin diphosphate-binding fold DOO79_08695 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II DOO79_08695 IPR005475 Transketolase-like, pyrimidine-binding domain DOO79_08695 IPR005474 Transketolase, N-terminal DOO79_08700 IPR002410 Peptidase S33 DOO79_08700 IPR022742 Serine aminopeptidase, S33 DOO79_08700 IPR029058 Alpha/Beta hydrolase fold DOO79_08705 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DOO79_08705 IPR010917 TonB-dependent receptor, conserved site DOO79_08705 IPR012910 TonB-dependent receptor, plug domain DOO79_08705 IPR010105 TonB-dependent siderophore receptor DOO79_08705 IPR037066 TonB-dependent receptor, plug domain superfamily DOO79_08705 IPR010916 TonB box, conserved site DOO79_08705 IPR039423 TonB-dependent receptor-like DOO79_08705 IPR000531 TonB-dependent receptor-like, beta-barrel DOO79_08715 IPR016047 Peptidase M23 DOO79_08715 IPR007340 Opacity-associated protein A DOO79_08715 IPR011055 Duplicated hybrid motif DOO79_08725 IPR038063 L,D-transpeptidase catalytic domain-like DOO79_08725 IPR005490 L,D-transpeptidase catalytic domain DOO79_08725 IPR018392 LysM domain DOO79_08725 IPR036779 LysM domain superfamily DOO79_08760 IPR017871 ABC transporter, conserved site DOO79_08760 IPR005116 Transport-associated OB, type 1 DOO79_08760 IPR003439 ABC transporter-like DOO79_08760 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_08760 IPR004606 Molybdenum-pterin binding DOO79_08760 IPR011868 Molybdate ABC transporter, ATP-binding protein DOO79_08760 IPR003593 AAA+ ATPase domain DOO79_08760 IPR015852 ABC transporter, molybdenum import, ModC DOO79_08760 IPR008995 Molybdate/tungstate binding, C-terminal DOO79_08765 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOO79_08765 IPR035906 MetI-like superfamily DOO79_08765 IPR011867 Molybdate ABC transporter, permease protein DOO79_08770 IPR005950 Molybdate ABC transporter, substrate-binding protein DOO79_08775 IPR005939 Beta-lactamase hydrolase-like DOO79_08775 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOO79_08775 IPR001279 Metallo-beta-lactamase DOO79_08775 IPR029021 Protein-tyrosine phosphatase-like DOO79_08785 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DOO79_08785 IPR005618 Outer membrane protein, OmpW DOO79_08790 IPR005618 Outer membrane protein, OmpW DOO79_08790 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DOO79_08800 IPR008490 Transposase InsH, N-terminal DOO79_08805 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family DOO79_08805 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site DOO79_08805 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain DOO79_08805 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I DOO79_08805 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain DOO79_08805 IPR036291 NAD(P)-binding domain superfamily DOO79_08830 IPR001576 Phosphoglycerate kinase DOO79_08830 IPR015911 Phosphoglycerate kinase, conserved site DOO79_08830 IPR015824 Phosphoglycerate kinase, N-terminal DOO79_08830 IPR036043 Phosphoglycerate kinase superfamily DOO79_08840 IPR018209 Pyruvate kinase, active site DOO79_08840 IPR015795 Pyruvate kinase, C-terminal DOO79_08840 IPR036918 Pyruvate kinase, C-terminal domain superfamily DOO79_08840 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DOO79_08840 IPR015793 Pyruvate kinase, barrel DOO79_08840 IPR040442 Pyruvate kinase-like domain superfamily DOO79_08840 IPR011037 Pyruvate kinase-like, insert domain superfamily DOO79_08840 IPR001697 Pyruvate kinase DOO79_08840 IPR015806 Pyruvate kinase, insert domain superfamily DOO79_08850 IPR000741 Fructose-bisphosphate aldolase, class-I DOO79_08850 IPR029768 Fructose-bisphosphate aldolase class-I active site DOO79_08850 IPR013785 Aldolase-type TIM barrel DOO79_08855 IPR002589 Macro domain DOO79_08865 IPR005859 Cysteine synthase CysK DOO79_08865 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site DOO79_08865 IPR001926 Pyridoxal-phosphate dependent enzyme DOO79_08865 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DOO79_08865 IPR005856 Cysteine synthase DOO79_08875 IPR005119 LysR, substrate-binding DOO79_08875 IPR000847 Transcription regulator HTH, LysR DOO79_08875 IPR036390 Winged helix DNA-binding domain superfamily DOO79_08875 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_08890 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_08890 IPR011006 CheY-like superfamily DOO79_08890 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_08890 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_08890 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOO79_08890 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_08890 IPR036641 HPT domain superfamily DOO79_08890 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain DOO79_08890 IPR001789 Signal transduction response regulator, receiver domain DOO79_08890 IPR005467 Histidine kinase domain DOO79_08910 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOO79_08910 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase DOO79_08910 IPR002500 Phosphoadenosine phosphosulphate reductase DOO79_08910 IPR011800 Phosphoadenosine phosphosulphate reductase CysH DOO79_08915 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site DOO79_08915 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain DOO79_08915 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain DOO79_08915 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit DOO79_08915 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily DOO79_08920 IPR001433 Oxidoreductase FAD/NAD(P)-binding DOO79_08920 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily DOO79_08920 IPR017938 Riboflavin synthase-like beta-barrel DOO79_08920 IPR029039 Flavoprotein-like superfamily DOO79_08920 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase DOO79_08920 IPR008254 Flavodoxin/nitric oxide synthase DOO79_08920 IPR001094 Flavodoxin-like DOO79_08920 IPR017927 FAD-binding domain, ferredoxin reductase-type DOO79_08920 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria DOO79_08920 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding DOO79_08920 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain DOO79_08920 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DOO79_08925 IPR002500 Phosphoadenosine phosphosulphate reductase DOO79_08925 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOO79_08925 IPR011784 Sulphate adenylyltransferase, small subunit DOO79_08930 IPR009000 Translation protein, beta-barrel domain superfamily DOO79_08930 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_08930 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain DOO79_08930 IPR011779 Sulphate adenylyltransferase, large subunit DOO79_08930 IPR000795 Transcription factor, GTP-binding domain DOO79_08930 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DOO79_08930 IPR031157 Tr-type G domain, conserved site DOO79_08930 IPR002891 Adenylyl-sulfate kinase DOO79_08935 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DOO79_08935 IPR006143 RND efflux pump, membrane fusion protein DOO79_08940 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DOO79_08940 IPR001036 Acriflavin resistance protein DOO79_08990 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted DOO79_08990 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DOO79_08990 IPR029028 Alpha/beta knot methyltransferases DOO79_08990 IPR029064 50S ribosomal protein L30e-like DOO79_08990 IPR004441 RNA methyltransferase TrmH family DOO79_08990 IPR001537 tRNA/rRNA methyltransferase, SpoU type DOO79_08990 IPR013123 RNA 2-O ribose methyltransferase, substrate binding DOO79_08995 IPR019819 Carboxylesterase type B, conserved site DOO79_08995 IPR000997 Cholinesterase DOO79_08995 IPR002018 Carboxylesterase, type B DOO79_08995 IPR029058 Alpha/Beta hydrolase fold DOO79_08995 IPR019826 Carboxylesterase type B, active site DOO79_09005 IPR029486 Glycosyl-hydrolase 97, N-terminal domain DOO79_09005 IPR017853 Glycoside hydrolase superfamily DOO79_09005 IPR013780 Glycosyl hydrolase, all-beta DOO79_09005 IPR013785 Aldolase-type TIM barrel DOO79_09005 IPR014718 Glycoside hydrolase-type carbohydrate-binding DOO79_09005 IPR029483 Glycosyl-hydrolase 97, C-terminal oligomerisation domain DOO79_09005 IPR019563 Glycosyl-hydrolase 97, catalytic domain DOO79_09010 IPR013783 Immunoglobulin-like fold DOO79_09010 IPR017853 Glycoside hydrolase superfamily DOO79_09010 IPR006104 Glycosyl hydrolases family 2, sugar binding domain DOO79_09010 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich DOO79_09010 IPR008979 Galactose-binding-like domain superfamily DOO79_09010 IPR028829 Exo-beta-D-glucosaminidase DOO79_09010 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily DOO79_09010 IPR041351 Exo-beta-D-glucosaminidase, Ig-fold domain DOO79_09020 IPR023588 Transcription regulator HTH, PurR DOO79_09020 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOO79_09020 IPR028082 Periplasmic binding protein-like I DOO79_09020 IPR000843 LacI-type HTH domain DOO79_09030 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L DOO79_09030 IPR036019 Gated mechanosensitive channel DOO79_09030 IPR019823 Large-conductance mechanosensitive channel, conserved site DOO79_09030 IPR001185 Large-conductance mechanosensitive channel DOO79_09035 IPR011234 Fumarylacetoacetase-like, C-terminal DOO79_09035 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily DOO79_09055 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily DOO79_09055 IPR006037 Regulator of K+ conductance, C-terminal DOO79_09055 IPR031312 Sodium/sulphate symporter, conserved site DOO79_09055 IPR004680 Citrate transporter-like domain DOO79_09060 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOO79_09060 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type DOO79_09070 IPR013785 Aldolase-type TIM barrel DOO79_09070 IPR033983 Thiazole synthase ThiG DOO79_09070 IPR008867 Thiazole synthase DOO79_09080 IPR036514 SGNH hydrolase superfamily DOO79_09080 IPR006315 Outer membrane autotransporter barrel DOO79_09080 IPR008265 Lipase, GDSL, active site DOO79_09080 IPR017186 Lipase, autotransporter EstA DOO79_09080 IPR001087 GDSL lipase/esterase DOO79_09080 IPR036709 Autotransporter beta-domain superfamily DOO79_09080 IPR005546 Autotransporter beta-domain DOO79_09110 IPR013783 Immunoglobulin-like fold DOO79_09110 IPR014756 Immunoglobulin E-set DOO79_09110 IPR013780 Glycosyl hydrolase, all-beta DOO79_09110 IPR004193 Glycoside hydrolase, family 13, N-terminal DOO79_09110 IPR006047 Glycosyl hydrolase, family 13, catalytic domain DOO79_09110 IPR011837 Glycogen debranching enzyme, GlgX type DOO79_09110 IPR017853 Glycoside hydrolase superfamily DOO79_09115 IPR013651 ATP-grasp fold, RimK-type DOO79_09115 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK DOO79_09115 IPR041107 RimK, PreATP-grasp domain DOO79_09115 IPR013815 ATP-grasp fold, subdomain 1 DOO79_09115 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX DOO79_09115 IPR011761 ATP-grasp fold DOO79_09125 IPR011006 CheY-like superfamily DOO79_09125 IPR001867 OmpR/PhoB-type DNA-binding domain DOO79_09125 IPR039420 Transcriptional regulatory protein WalR-like DOO79_09125 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_09125 IPR001789 Signal transduction response regulator, receiver domain DOO79_09130 IPR035965 PAS domain superfamily DOO79_09130 IPR000014 PAS domain DOO79_09130 IPR013767 PAS fold DOO79_09130 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOO79_09130 IPR005467 Histidine kinase domain DOO79_09130 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_09130 IPR031967 PhoR, single Cache-like domain DOO79_09130 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_09130 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_09130 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_09240 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal DOO79_09240 IPR009056 Cytochrome c-like domain DOO79_09240 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily DOO79_09240 IPR036909 Cytochrome c-like domain superfamily DOO79_09240 IPR004678 Cytochrome c oxidase cbb3-type, subunit III DOO79_09250 IPR036291 NAD(P)-binding domain superfamily DOO79_09250 IPR020843 Polyketide synthase, enoylreductase domain DOO79_09250 IPR014183 Alcohol dehydrogenase class III DOO79_09250 IPR013149 Alcohol dehydrogenase, C-terminal DOO79_09250 IPR013154 Alcohol dehydrogenase, N-terminal DOO79_09250 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site DOO79_09250 IPR011032 GroES-like superfamily DOO79_09260 IPR025944 Sigma-54 interaction domain, conserved site DOO79_09260 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DOO79_09260 IPR003593 AAA+ ATPase domain DOO79_09260 IPR003018 GAF domain DOO79_09260 IPR029016 GAF-like domain superfamily DOO79_09260 IPR009057 Homeobox-like domain superfamily DOO79_09260 IPR002197 DNA binding HTH domain, Fis-type DOO79_09260 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DOO79_09260 IPR002078 RNA polymerase sigma factor 54 interaction domain DOO79_09260 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_09265 IPR029056 Ribokinase-like DOO79_09265 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site DOO79_09265 IPR011611 Carbohydrate kinase PfkB DOO79_09270 IPR004753 Cell shape determining protein MreB DOO79_09275 IPR007221 Rod shape-determining protein MreC DOO79_09275 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 DOO79_09275 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 DOO79_09285 IPR017790 Penicillin-binding protein 2 DOO79_09285 IPR001460 Penicillin-binding protein, transpeptidase DOO79_09285 IPR036138 Penicillin-binding protein, dimerisation domain superfamily DOO79_09285 IPR005311 Penicillin-binding protein, dimerisation domain DOO79_09285 IPR012338 Beta-lactamase/transpeptidase-like DOO79_09290 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site DOO79_09290 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA DOO79_09290 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB DOO79_09295 IPR011050 Pectin lyase fold/virulence factor DOO79_09295 IPR000743 Glycoside hydrolase, family 28 DOO79_09295 IPR012334 Pectin lyase fold DOO79_09305 IPR023346 Lysozyme-like domain superfamily DOO79_09305 IPR011757 Lytic transglycosylase MltB DOO79_09305 IPR031304 Transglycosylase SLT domain 2 DOO79_09310 IPR034718 Endolytic peptidoglycan transglycosylase RlpA DOO79_09310 IPR009009 RlpA-like protein, double-psi beta-barrel domain DOO79_09310 IPR036908 RlpA-like domain superfamily DOO79_09310 IPR012997 Rare lipoprotein A DOO79_09310 IPR007730 Sporulation-like domain DOO79_09310 IPR036680 Sporulation-like domain superfamily DOO79_09320 IPR012338 Beta-lactamase/transpeptidase-like DOO79_09320 IPR015956 Penicillin-binding protein, C-terminal domain superfamily DOO79_09320 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal DOO79_09320 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily DOO79_09320 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A DOO79_09320 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal DOO79_09330 IPR007454 Uncharacterised protein family UPF0250 DOO79_09330 IPR027471 YbeD-like domain superfamily DOO79_09335 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain DOO79_09335 IPR000544 Octanoyltransferase DOO79_09335 IPR020605 Octanoyltransferase, conserved site DOO79_09340 IPR031691 Lipoyl synthase, N-terminal DOO79_09340 IPR003698 Lipoyl synthase DOO79_09340 IPR013785 Aldolase-type TIM barrel DOO79_09340 IPR007197 Radical SAM DOO79_09340 IPR006638 Elp3/MiaB/NifB DOO79_09345 IPR005151 Tail specific protease DOO79_09345 IPR020992 Tail specific protease, C-terminal DOO79_09345 IPR040573 Tail specific protease, N-terminal domain DOO79_09345 IPR036034 PDZ superfamily DOO79_09345 IPR001478 PDZ domain DOO79_09345 IPR029045 ClpP/crotonase-like domain superfamily DOO79_09345 IPR004447 C-terminal-processing peptidase S41A DOO79_09355 IPR000847 Transcription regulator HTH, LysR DOO79_09355 IPR036390 Winged helix DNA-binding domain superfamily DOO79_09355 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_09355 IPR005119 LysR, substrate-binding DOO79_09365 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOO79_09365 IPR000086 NUDIX hydrolase domain DOO79_09365 IPR004821 Cytidyltransferase-like domain DOO79_09365 IPR020084 NUDIX hydrolase, conserved site DOO79_09365 IPR015797 NUDIX hydrolase-like domain superfamily DOO79_09365 IPR041750 Bifunctional NMN adenylyltransferase/Nudix hydrolase, N-terminal NMNAT domain DOO79_09400 IPR036291 NAD(P)-binding domain superfamily DOO79_09400 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding DOO79_09400 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOO79_09400 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type DOO79_09400 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DOO79_09400 IPR006183 6-phosphogluconate dehydrogenase DOO79_09400 IPR006114 6-phosphogluconate dehydrogenase, C-terminal DOO79_09405 IPR036291 NAD(P)-binding domain superfamily DOO79_09405 IPR000683 Oxidoreductase, N-terminal DOO79_09405 IPR004104 Oxidoreductase, C-terminal DOO79_09410 IPR014004 Transport-associated and nodulation domain, bacteria DOO79_09410 IPR007055 BON domain DOO79_09415 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_09415 IPR016132 Phytochrome chromophore attachment domain DOO79_09415 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_09415 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_09415 IPR001294 Phytochrome DOO79_09415 IPR013515 Phytochrome, central region DOO79_09415 IPR013654 PAS fold-2 DOO79_09415 IPR003018 GAF domain DOO79_09415 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOO79_09415 IPR005467 Histidine kinase domain DOO79_09415 IPR035965 PAS domain superfamily DOO79_09415 IPR029016 GAF-like domain superfamily DOO79_09420 IPR011006 CheY-like superfamily DOO79_09420 IPR001789 Signal transduction response regulator, receiver domain DOO79_09425 IPR029151 Periplasmic sensor-like domain superfamily DOO79_09425 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_09425 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOO79_09425 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_09425 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_09425 IPR005467 Histidine kinase domain DOO79_09425 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_09430 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily DOO79_09430 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK DOO79_09435 IPR036291 NAD(P)-binding domain superfamily DOO79_09435 IPR002347 Short-chain dehydrogenase/reductase SDR DOO79_09435 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOO79_09435 IPR017711 Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase DOO79_09480 IPR013356 Type II secretion system GspD DOO79_09480 IPR001775 GspD/PilQ family DOO79_09480 IPR005644 NolW-like DOO79_09480 IPR004846 Type II/III secretion system DOO79_09480 IPR038591 NolW-like superfamily DOO79_09480 IPR004845 Type II secretion system GspD, conserved site DOO79_09485 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_09485 IPR001482 Type II/IV secretion system protein DOO79_09485 IPR037257 General secretory system II, protein E, N-terminal superfamily DOO79_09485 IPR042181 Type II secretion system, protein E, N-terminal DOO79_09485 IPR013369 Type II secretion system GspE DOO79_09490 IPR003004 GspF/PilC family DOO79_09490 IPR042094 Type II secretion system F domain superfamily DOO79_09490 IPR018076 Type II secretion system F domain DOO79_09490 IPR011850 General secretion pathway protein F DOO79_09490 IPR001992 Type II secretion system conserved site DOO79_09495 IPR000983 Bacterial general secretion pathway protein G-type pilin DOO79_09495 IPR010054 General secretion pathway protein G DOO79_09495 IPR012902 Prokaryotic N-terminal methylation site DOO79_09495 IPR013545 Type II secretion system protein G DOO79_09500 IPR002416 Type II secretion system protein H DOO79_09500 IPR012902 Prokaryotic N-terminal methylation site DOO79_09500 IPR022346 General secretion pathway, GspH DOO79_09505 IPR012902 Prokaryotic N-terminal methylation site DOO79_09505 IPR003413 Type II secretion system protein I domain DOO79_09505 IPR010052 Type II secretion system protein I DOO79_09510 IPR010055 Type II secretion system protein J DOO79_09510 IPR012902 Prokaryotic N-terminal methylation site DOO79_09515 IPR038072 GspK, central domain superfamily DOO79_09515 IPR005628 General secretion pathway protein K DOO79_09540 IPR008964 Invasin/intimin cell-adhesion fragments DOO79_09540 IPR013783 Immunoglobulin-like fold DOO79_09540 IPR017853 Glycoside hydrolase superfamily DOO79_09540 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily DOO79_09540 IPR006104 Glycosyl hydrolases family 2, sugar binding domain DOO79_09540 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich DOO79_09540 IPR006103 Glycoside hydrolase family 2, catalytic domain DOO79_09540 IPR023232 Glycoside hydrolase, family 2, active site DOO79_09540 IPR006101 Glycoside hydrolase, family 2 DOO79_09540 IPR040605 Glycoside hydrolase family 2, domain 5 DOO79_09540 IPR008979 Galactose-binding-like domain superfamily DOO79_09540 IPR032311 Domain of unknown function DUF4982 DOO79_09555 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DOO79_09555 IPR000524 Transcription regulator HTH, GntR DOO79_09555 IPR011663 UbiC transcription regulator-associated DOO79_09555 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_09555 IPR036390 Winged helix DNA-binding domain superfamily DOO79_09560 IPR011701 Major facilitator superfamily DOO79_09560 IPR005964 Bacterial glucose/galactose transporter DOO79_09560 IPR036259 MFS transporter superfamily DOO79_09565 IPR028082 Periplasmic binding protein-like I DOO79_09565 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOO79_09565 IPR000843 LacI-type HTH domain DOO79_09570 IPR001347 Sugar isomerase (SIS) DOO79_09570 IPR035490 GlmS/FrlB, SIS domain 2 DOO79_09570 IPR035466 GlmS/AgaS, SIS domain 1 DOO79_09570 IPR017932 Glutamine amidotransferase type 2 domain DOO79_09570 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising DOO79_09570 IPR029055 Nucleophile aminohydrolases, N-terminal DOO79_09575 IPR006680 Amidohydrolase-related DOO79_09575 IPR003764 N-acetylglucosamine-6-phosphate deacetylase DOO79_09575 IPR011059 Metal-dependent hydrolase, composite domain superfamily DOO79_09575 IPR032466 Metal-dependent hydrolase DOO79_09585 IPR003607 HD/PDEase domain DOO79_09585 IPR012006 tRNA nucleotidyltransferase, proteobacteria DOO79_09585 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain DOO79_09585 IPR006674 HD domain DOO79_09585 IPR002646 Poly A polymerase, head domain DOO79_09590 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal DOO79_09590 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal DOO79_09590 IPR012132 Glucose-methanol-choline oxidoreductase DOO79_09590 IPR011533 Oxygen-dependent choline dehydrogenase DOO79_09590 IPR036188 FAD/NAD(P)-binding domain superfamily DOO79_09590 IPR027424 Glucose Oxidase, domain 2 DOO79_09595 IPR011264 Betaine aldehyde dehydrogenase DOO79_09595 IPR015590 Aldehyde dehydrogenase domain DOO79_09595 IPR016162 Aldehyde dehydrogenase, N-terminal DOO79_09595 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DOO79_09595 IPR016160 Aldehyde dehydrogenase, cysteine active site DOO79_09595 IPR016161 Aldehyde/histidinol dehydrogenase DOO79_09595 IPR016163 Aldehyde dehydrogenase, C-terminal DOO79_09600 IPR018093 BCCT transporter, conserved site DOO79_09600 IPR000060 BCCT transporter family DOO79_09615 IPR001853 DSBA-like thioredoxin domain DOO79_09615 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL DOO79_09615 IPR036249 Thioredoxin-like superfamily DOO79_09615 IPR017937 Thioredoxin, conserved site DOO79_09615 IPR013766 Thioredoxin domain DOO79_09625 IPR024167 Cytochrome c4-like DOO79_09625 IPR009056 Cytochrome c-like domain DOO79_09625 IPR036909 Cytochrome c-like domain superfamily DOO79_09630 IPR006073 GTP binding domain DOO79_09630 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_09630 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC DOO79_09630 IPR030393 EngB-type guanine nucleotide-binding (G) domain DOO79_09635 IPR022712 Beta-Casp domain DOO79_09635 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain DOO79_09635 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOO79_09635 IPR001279 Metallo-beta-lactamase DOO79_09650 IPR035434 Glutamate--cysteine ligase, bacteria and plant DOO79_09650 IPR017809 Glutamate--cysteine ligase EgtA, Actinobacteria DOO79_09650 IPR006336 Glutamate--cysteine ligase, GCS2 DOO79_09650 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain DOO79_09655 IPR005467 Histidine kinase domain DOO79_09655 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_09655 IPR003660 HAMP domain DOO79_09655 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOO79_09655 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_09655 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_09655 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_09660 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_09660 IPR039420 Transcriptional regulatory protein WalR-like DOO79_09660 IPR011006 CheY-like superfamily DOO79_09660 IPR001867 OmpR/PhoB-type DNA-binding domain DOO79_09660 IPR016032 Signal transduction response regulator, C-terminal effector DOO79_09660 IPR001789 Signal transduction response regulator, receiver domain DOO79_09675 IPR038390 Metal-sensitive transcriptional repressor superfamily DOO79_09675 IPR003735 Metal-sensitive transcriptional repressor DOO79_09680 IPR013154 Alcohol dehydrogenase, N-terminal DOO79_09680 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site DOO79_09680 IPR014183 Alcohol dehydrogenase class III DOO79_09680 IPR011032 GroES-like superfamily DOO79_09680 IPR020843 Polyketide synthase, enoylreductase domain DOO79_09680 IPR036291 NAD(P)-binding domain superfamily DOO79_09680 IPR013149 Alcohol dehydrogenase, C-terminal DOO79_09685 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V DOO79_09685 IPR014185 Glutathione-dependent formaldehyde-activating enzyme DOO79_09685 IPR011057 Mss4-like superfamily DOO79_09690 IPR029058 Alpha/Beta hydrolase fold DOO79_09690 IPR000801 Putative esterase DOO79_09690 IPR014186 S-formylglutathione hydrolase DOO79_09700 IPR036390 Winged helix DNA-binding domain superfamily DOO79_09700 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOO79_09700 IPR000524 Transcription regulator HTH, GntR DOO79_09700 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOO79_09700 IPR015424 Pyridoxal phosphate-dependent transferase DOO79_09700 IPR004839 Aminotransferase, class I/classII DOO79_09700 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_09705 IPR003719 Phenazine biosynthesis PhzF protein DOO79_09710 IPR000620 EamA domain DOO79_09720 IPR003593 AAA+ ATPase domain DOO79_09720 IPR032781 ABC-transporter extension domain DOO79_09720 IPR003439 ABC transporter-like DOO79_09720 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_09720 IPR017871 ABC transporter, conserved site DOO79_09720 IPR022374 Energy-dependent translational throttle protein EttA DOO79_09730 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOO79_09730 IPR001085 Serine hydroxymethyltransferase DOO79_09730 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site DOO79_09730 IPR039429 Serine hydroxymethyltransferase-like domain DOO79_09730 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOO79_09730 IPR015424 Pyridoxal phosphate-dependent transferase DOO79_09735 IPR005144 ATP-cone domain DOO79_09735 IPR003796 Ribonucleotide reductase regulator NrdR-like DOO79_09745 IPR002125 Cytidine and deoxycytidylate deaminase domain DOO79_09745 IPR016192 APOBEC/CMP deaminase, zinc-binding DOO79_09745 IPR016193 Cytidine deaminase-like DOO79_09745 IPR024072 Dihydrofolate reductase-like domain superfamily DOO79_09745 IPR004794 Riboflavin biosynthesis protein RibD DOO79_09745 IPR011549 Riboflavin-specific deaminase, C-terminal DOO79_09745 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal DOO79_09755 IPR017938 Riboflavin synthase-like beta-barrel DOO79_09755 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily DOO79_09755 IPR001783 Lumazine-binding protein DOO79_09755 IPR026017 Lumazine-binding domain DOO79_09760 IPR036144 RibA-like superfamily DOO79_09760 IPR032677 GTP cyclohydrolase II DOO79_09760 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DOO79_09760 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB DOO79_09765 IPR034964 Lumazine synthase DOO79_09765 IPR002180 Lumazine/riboflavin synthase DOO79_09765 IPR036467 Lumazine/riboflavin synthase superfamily DOO79_09770 IPR035926 NusB-like superfamily DOO79_09770 IPR011605 NusB antitermination factor DOO79_09770 IPR006027 NusB/RsmB/TIM44 DOO79_09775 IPR036921 PurM-like, N-terminal domain superfamily DOO79_09775 IPR006283 Thiamine-monophosphate kinase DOO79_09775 IPR016188 PurM-like, N-terminal domain DOO79_09775 IPR036676 PurM-like, C-terminal domain superfamily DOO79_09775 IPR010918 PurM-like, C-terminal domain DOO79_09800 IPR023298 P-type ATPase, transmembrane domain superfamily DOO79_09800 IPR004623 Potassium-transporting ATPase A chain DOO79_09805 IPR023299 P-type ATPase, cytoplasmic domain N DOO79_09805 IPR023298 P-type ATPase, transmembrane domain superfamily DOO79_09805 IPR008250 P-type ATPase, A domain superfamily DOO79_09805 IPR006391 P-type ATPase, B chain, subfamily IA DOO79_09805 IPR001757 P-type ATPase DOO79_09805 IPR018303 P-type ATPase, phosphorylation site DOO79_09805 IPR036412 HAD-like superfamily DOO79_09810 IPR003820 Potassium-transporting ATPase C chain DOO79_09815 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal DOO79_09815 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_09815 IPR005467 Histidine kinase domain DOO79_09815 IPR025201 Sensor protein KdpD, transmembrane domain DOO79_09815 IPR038318 KdpD, transmembrane domain superfamily DOO79_09815 IPR029016 GAF-like domain superfamily DOO79_09815 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOO79_09815 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_09815 IPR003018 GAF domain DOO79_09815 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_09815 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_09820 IPR011006 CheY-like superfamily DOO79_09820 IPR001867 OmpR/PhoB-type DNA-binding domain DOO79_09820 IPR001789 Signal transduction response regulator, receiver domain DOO79_09820 IPR039420 Transcriptional regulatory protein WalR-like DOO79_09820 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_09850 IPR004113 FAD-linked oxidase, C-terminal DOO79_09850 IPR016164 FAD-linked oxidase-like, C-terminal DOO79_09850 IPR036318 FAD-binding, type PCMH-like superfamily DOO79_09850 IPR016166 FAD-binding domain, PCMH-type DOO79_09850 IPR004490 Glycolate oxidase subunit GlcD DOO79_09850 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 DOO79_09850 IPR006094 FAD linked oxidase, N-terminal DOO79_09855 IPR007404 LexA-binding, inner membrane-associated putative hydrolase DOO79_09860 IPR003509 Uncharacterised protein family UPF0102 DOO79_09860 IPR011335 Restriction endonuclease type II-like DOO79_09860 IPR011856 tRNA endonuclease-like domain superfamily DOO79_09870 IPR014777 Tetrapyrrole methylase, subdomain 1 DOO79_09870 IPR014776 Tetrapyrrole methylase, subdomain 2 DOO79_09870 IPR035996 Tetrapyrrole methylase superfamily DOO79_09870 IPR000878 Tetrapyrrole methylase DOO79_09870 IPR008189 rRNA small subunit methyltransferase I DOO79_09870 IPR018063 SAM-dependent methyltransferase RsmI, conserved site DOO79_09895 IPR003444 Transcriptional regulator MraZ DOO79_09895 IPR038619 MraZ superfamily DOO79_09895 IPR035644 MraZ, C-terminal DOO79_09895 IPR020603 MraZ domain DOO79_09895 IPR035642 MraZ, N-terminal DOO79_09895 IPR037914 SpoVT-AbrB domain superfamily DOO79_09895 IPR007159 SpoVT-AbrB domain DOO79_09900 IPR002903 Ribosomal RNA small subunit methyltransferase H DOO79_09900 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily DOO79_09900 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOO79_09905 IPR011922 Cell division protein FtsL DOO79_09910 IPR012338 Beta-lactamase/transpeptidase-like DOO79_09910 IPR001460 Penicillin-binding protein, transpeptidase DOO79_09910 IPR037532 Peptidoglycan D,D-transpeptidase FtsI DOO79_09910 IPR005311 Penicillin-binding protein, dimerisation domain DOO79_09910 IPR036138 Penicillin-binding protein, dimerisation domain superfamily DOO79_09915 IPR036565 Mur-like, catalytic domain superfamily DOO79_09915 IPR013221 Mur ligase, central DOO79_09915 IPR000713 Mur ligase, N-terminal catalytic domain DOO79_09915 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase DOO79_09915 IPR004101 Mur ligase, C-terminal DOO79_09915 IPR036615 Mur ligase, C-terminal domain superfamily DOO79_09915 IPR035911 MurE/MurF, N-terminal DOO79_09920 IPR036565 Mur-like, catalytic domain superfamily DOO79_09920 IPR004101 Mur ligase, C-terminal DOO79_09920 IPR036615 Mur ligase, C-terminal domain superfamily DOO79_09920 IPR013221 Mur ligase, central DOO79_09920 IPR000713 Mur ligase, N-terminal catalytic domain DOO79_09920 IPR035911 MurE/MurF, N-terminal DOO79_09920 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase DOO79_09925 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site DOO79_09925 IPR000715 Glycosyl transferase, family 4 DOO79_09925 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase DOO79_09930 IPR013437 Probable peptidoglycan glycosyltransferase FtsW DOO79_09930 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA DOO79_09935 IPR006009 N-acetylglucosaminyltransferase, MurG DOO79_09935 IPR007235 Glycosyl transferase, family 28, C-terminal DOO79_09935 IPR004276 Glycosyltransferase family 28, N-terminal domain DOO79_09940 IPR036615 Mur ligase, C-terminal domain superfamily DOO79_09940 IPR004101 Mur ligase, C-terminal DOO79_09940 IPR036565 Mur-like, catalytic domain superfamily DOO79_09940 IPR005758 UDP-N-acetylmuramate--L-alanine ligase DOO79_09940 IPR013221 Mur ligase, central DOO79_09940 IPR000713 Mur ligase, N-terminal catalytic domain DOO79_09945 IPR016185 Pre-ATP-grasp domain superfamily DOO79_09945 IPR011761 ATP-grasp fold DOO79_09945 IPR013815 ATP-grasp fold, subdomain 1 DOO79_09945 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site DOO79_09945 IPR005905 D-alanine--D-alanine ligase DOO79_09945 IPR011095 D-alanine--D-alanine ligase, C-terminal DOO79_09945 IPR011127 D-alanine--D-alanine ligase, N-terminal domain DOO79_09950 IPR013685 POTRA domain, FtsQ-type DOO79_09950 IPR005548 Cell division protein FtsQ/DivIB DOO79_09950 IPR026579 Cell division protein FtsQ DOO79_09950 IPR034746 POTRA domain DOO79_09955 IPR020823 Cell division protein FtsA DOO79_09955 IPR003494 SHS2 domain inserted in FtsA DOO79_09960 IPR008280 Tubulin/FtsZ, C-terminal DOO79_09960 IPR000158 Cell division protein FtsZ DOO79_09960 IPR020805 Cell division protein FtsZ, conserved site DOO79_09960 IPR024757 Cell division protein FtsZ, C-terminal DOO79_09960 IPR003008 Tubulin/FtsZ, GTPase domain DOO79_09960 IPR036525 Tubulin/FtsZ, GTPase domain superfamily DOO79_09960 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain DOO79_09965 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal DOO79_09965 IPR020568 Ribosomal protein S5 domain 2-type fold DOO79_09965 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase DOO79_09965 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal DOO79_09980 IPR036670 SecA, preprotein cross-linking domain superfamily DOO79_09980 IPR014018 SecA motor DEAD DOO79_09980 IPR011115 SecA DEAD-like, N-terminal DOO79_09980 IPR020937 SecA conserved site DOO79_09980 IPR000185 Protein translocase subunit SecA DOO79_09980 IPR011116 SecA Wing/Scaffold DOO79_09980 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_09980 IPR036266 SecA, Wing/Scaffold superfamily DOO79_09980 IPR011130 SecA, preprotein cross-linking domain DOO79_09980 IPR004027 SEC-C motif DOO79_09985 IPR015797 NUDIX hydrolase-like domain superfamily DOO79_09985 IPR020476 NUDIX hydrolase DOO79_09985 IPR020084 NUDIX hydrolase, conserved site DOO79_09985 IPR000086 NUDIX hydrolase domain DOO79_09995 IPR029041 FAD-linked oxidoreductase-like DOO79_09995 IPR004621 Eukaryotic-type methylenetetrahydrofolate reductase DOO79_09995 IPR003171 Methylenetetrahydrofolate reductase DOO79_09995 IPR004620 5,10-methylenetetrahydrofolate reductase DOO79_10010 IPR016039 Thiolase-like DOO79_10010 IPR020843 Polyketide synthase, enoylreductase domain DOO79_10010 IPR042104 Polyketide synthase, dehydratase domain superfamily DOO79_10010 IPR020807 Polyketide synthase, dehydratase domain DOO79_10010 IPR020806 Polyketide synthase, phosphopantetheine-binding domain DOO79_10010 IPR013968 Polyketide synthase, ketoreductase domain DOO79_10010 IPR014030 Beta-ketoacyl synthase, N-terminal DOO79_10010 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding DOO79_10010 IPR014031 Beta-ketoacyl synthase, C-terminal DOO79_10010 IPR018201 Beta-ketoacyl synthase, active site DOO79_10010 IPR011032 GroES-like superfamily DOO79_10010 IPR013154 Alcohol dehydrogenase, N-terminal DOO79_10010 IPR013149 Alcohol dehydrogenase, C-terminal DOO79_10010 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DOO79_10010 IPR014043 Acyl transferase DOO79_10010 IPR036291 NAD(P)-binding domain superfamily DOO79_10010 IPR036736 ACP-like superfamily DOO79_10010 IPR001227 Acyl transferase domain superfamily DOO79_10010 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DOO79_10010 IPR009081 Phosphopantetheine binding ACP domain DOO79_10010 IPR032821 Ketoacyl-synthetase, C-terminal extension DOO79_10015 IPR023828 Peptidase S8, subtilisin, Ser-active site DOO79_10015 IPR015366 Peptidase S53, activation domain DOO79_10015 IPR030400 Sedolisin domain DOO79_10015 IPR036852 Peptidase S8/S53 domain superfamily DOO79_10015 IPR000209 Peptidase S8/S53 domain DOO79_10035 IPR036291 NAD(P)-binding domain superfamily DOO79_10035 IPR000683 Oxidoreductase, N-terminal DOO79_10040 IPR006046 Alpha amylase DOO79_10040 IPR006047 Glycosyl hydrolase, family 13, catalytic domain DOO79_10040 IPR017853 Glycoside hydrolase superfamily DOO79_10065 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_10065 IPR000863 Sulfotransferase domain DOO79_10075 IPR041698 Methyltransferase domain 25 DOO79_10075 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOO79_10080 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DOO79_10080 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site DOO79_10080 IPR036291 NAD(P)-binding domain superfamily DOO79_10080 IPR000043 Adenosylhomocysteinase-like DOO79_10080 IPR042172 Adenosylhomocysteinase-like superfamily DOO79_10090 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type DOO79_10090 IPR021135 Phosphoenolpyruvate carboxylase DOO79_10090 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DOO79_10090 IPR033129 Phosphoenolpyruvate carboxylase, His active site DOO79_10090 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site DOO79_10135 IPR029033 Histidine phosphatase superfamily DOO79_10135 IPR000560 Histidine phosphatase superfamily, clade-2 DOO79_10135 IPR033379 Histidine acid phosphatase active site DOO79_10140 IPR002133 S-adenosylmethionine synthetase DOO79_10140 IPR022628 S-adenosylmethionine synthetase, N-terminal DOO79_10140 IPR022629 S-adenosylmethionine synthetase, central domain DOO79_10140 IPR022636 S-adenosylmethionine synthetase superfamily DOO79_10140 IPR022631 S-adenosylmethionine synthetase, conserved site DOO79_10140 IPR022630 S-adenosylmethionine synthetase, C-terminal DOO79_10150 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal DOO79_10150 IPR023506 Trans-aconitate 2-methyltransferase DOO79_10150 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOO79_10150 IPR041698 Methyltransferase domain 25 DOO79_10155 IPR035587 DUS-like, FMN-binding domain DOO79_10155 IPR013785 Aldolase-type TIM barrel DOO79_10155 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal DOO79_10155 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 DOO79_10155 IPR032887 tRNA-dihydrouridine synthase B DOO79_10155 IPR018517 tRNA-dihydrouridine synthase, conserved site DOO79_10155 IPR001269 tRNA-dihydrouridine synthase DOO79_10165 IPR011877 Ribokinase DOO79_10165 IPR002139 Ribokinase/fructokinase DOO79_10165 IPR029056 Ribokinase-like DOO79_10165 IPR011611 Carbohydrate kinase PfkB DOO79_10165 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site DOO79_10170 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial DOO79_10170 IPR002668 Concentrative nucleoside transporter N-terminal domain DOO79_10170 IPR011657 Concentrative nucleoside transporter C-terminal domain DOO79_10170 IPR008276 Concentrative nucleoside transporter DOO79_10170 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain DOO79_10180 IPR023210 NADP-dependent oxidoreductase domain DOO79_10180 IPR036812 NADP-dependent oxidoreductase domain superfamily DOO79_10190 IPR037066 TonB-dependent receptor, plug domain superfamily DOO79_10190 IPR010916 TonB box, conserved site DOO79_10190 IPR012910 TonB-dependent receptor, plug domain DOO79_10190 IPR010917 TonB-dependent receptor, conserved site DOO79_10190 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DOO79_10190 IPR039426 Vitamin B12 transporter BtuB-like DOO79_10190 IPR000531 TonB-dependent receptor-like, beta-barrel DOO79_10210 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOO79_10210 IPR035906 MetI-like superfamily DOO79_10215 IPR003593 AAA+ ATPase domain DOO79_10215 IPR003439 ABC transporter-like DOO79_10215 IPR017871 ABC transporter, conserved site DOO79_10215 IPR015859 ABC transporter, taurine import, TauD DOO79_10215 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_10225 IPR003819 TauD/TfdA-like domain DOO79_10225 IPR042098 Taurine dioxygenase TauD-like superfamily DOO79_10235 IPR003439 ABC transporter-like DOO79_10235 IPR003593 AAA+ ATPase domain DOO79_10235 IPR017871 ABC transporter, conserved site DOO79_10235 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_10240 IPR013830 SGNH hydrolase-type esterase domain DOO79_10240 IPR036514 SGNH hydrolase superfamily DOO79_10245 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_10245 IPR039420 Transcriptional regulatory protein WalR-like DOO79_10245 IPR001789 Signal transduction response regulator, receiver domain DOO79_10245 IPR016032 Signal transduction response regulator, C-terminal effector DOO79_10245 IPR001867 OmpR/PhoB-type DNA-binding domain DOO79_10245 IPR011006 CheY-like superfamily DOO79_10250 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_10250 IPR013727 Two-component sensor kinase, N-terminal DOO79_10250 IPR005467 Histidine kinase domain DOO79_10250 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOO79_10250 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_10250 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_10250 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_10270 IPR036945 Diacylglycerol kinase (DAGK) superfamily DOO79_10270 IPR000829 DAGK family DOO79_10270 IPR033718 Diacylglycerol kinase, prokaryotic DOO79_10285 IPR001736 Phospholipase D/Transphosphatidylase DOO79_10285 IPR030871 Cardiolipin synthase C DOO79_10285 IPR025202 Phospholipase D-like domain DOO79_10290 IPR011006 CheY-like superfamily DOO79_10290 IPR035909 Methylesterase CheB, C-terminal DOO79_10290 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type DOO79_10290 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase DOO79_10290 IPR001789 Signal transduction response regulator, receiver domain DOO79_10295 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOO79_10295 IPR000780 MCP methyltransferase, CheR-type DOO79_10295 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal DOO79_10295 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily DOO79_10295 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal DOO79_10295 IPR026024 Chemotaxis protein methyltransferase CheR DOO79_10300 IPR000160 GGDEF domain DOO79_10300 IPR000700 PAS-associated, C-terminal DOO79_10300 IPR035919 EAL domain superfamily DOO79_10300 IPR001633 EAL domain DOO79_10300 IPR012226 Diguanylate cyclase/phosphodiesterase DOO79_10300 IPR029787 Nucleotide cyclase DOO79_10300 IPR001610 PAC motif DOO79_10300 IPR000014 PAS domain DOO79_10300 IPR035965 PAS domain superfamily DOO79_10305 IPR039315 Chemotaxis protein CheW DOO79_10305 IPR002545 CheW-like domain DOO79_10305 IPR036061 CheW-like domain superfamily DOO79_10310 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DOO79_10310 IPR004090 Chemotaxis methyl-accepting receptor DOO79_10310 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DOO79_10310 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DOO79_10310 IPR003660 HAMP domain DOO79_10310 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DOO79_10315 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_10315 IPR036641 HPT domain superfamily DOO79_10315 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain DOO79_10315 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_10315 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_10315 IPR035891 CheY-binding domain of CheA DOO79_10315 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_10315 IPR005467 Histidine kinase domain DOO79_10315 IPR015162 CheY binding DOO79_10315 IPR036061 CheW-like domain superfamily DOO79_10315 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily DOO79_10315 IPR004105 Histidine kinase CheA-like, homodimeric domain DOO79_10315 IPR002545 CheW-like domain DOO79_10325 IPR011545 DEAD/DEAH box helicase domain DOO79_10325 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOO79_10325 IPR001650 Helicase, C-terminal DOO79_10325 IPR004576 Transcription-repair coupling factor DOO79_10325 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_10325 IPR037235 TRCF-like, C-terminal domain DOO79_10325 IPR005118 Transcription-repair-coupling factor, C-terminal domain DOO79_10325 IPR041471 UvrB, interaction domain DOO79_10325 IPR003711 CarD-like/TRCF domain DOO79_10325 IPR036101 CarD-like/TRCF domain superfamily DOO79_10335 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DOO79_10335 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOO79_10335 IPR007473 Ribosomal RNA large subunit methyltransferase J DOO79_10345 IPR003660 HAMP domain DOO79_10345 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_10345 IPR029151 Periplasmic sensor-like domain superfamily DOO79_10345 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOO79_10345 IPR005467 Histidine kinase domain DOO79_10345 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_10345 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_10345 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_10350 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt DOO79_10360 IPR010364 Uncharacterised protein family, inner membrane CreD DOO79_10385 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOO79_10385 IPR033910 Glutamyl-tRNA synthetase DOO79_10385 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding DOO79_10385 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain DOO79_10385 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 DOO79_10385 IPR000924 Glutamyl/glutaminyl-tRNA synthetase DOO79_10385 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial DOO79_10385 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DOO79_10390 IPR036390 Winged helix DNA-binding domain superfamily DOO79_10390 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_10390 IPR002481 Ferric-uptake regulator DOO79_10400 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DOO79_10400 IPR006143 RND efflux pump, membrane fusion protein DOO79_10405 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 DOO79_10405 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DOO79_10405 IPR001036 Acriflavin resistance protein DOO79_10410 IPR010131 RND efflux system, outer membrane lipoprotein, NodT DOO79_10410 IPR003423 Outer membrane efflux protein DOO79_10425 IPR009057 Homeobox-like domain superfamily DOO79_10425 IPR018060 DNA binding HTH domain, AraC-type DOO79_10425 IPR009594 Transcription regulator HTH, AraC, N-terminal DOO79_10435 IPR005119 LysR, substrate-binding DOO79_10435 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_10435 IPR036390 Winged helix DNA-binding domain superfamily DOO79_10435 IPR000847 Transcription regulator HTH, LysR DOO79_10440 IPR036259 MFS transporter superfamily DOO79_10440 IPR020846 Major facilitator superfamily domain DOO79_10440 IPR011701 Major facilitator superfamily DOO79_10465 IPR008979 Galactose-binding-like domain superfamily DOO79_10465 IPR015500 Peptidase S8, subtilisin-related DOO79_10465 IPR023828 Peptidase S8, subtilisin, Ser-active site DOO79_10465 IPR002884 P domain DOO79_10465 IPR000209 Peptidase S8/S53 domain DOO79_10465 IPR023827 Peptidase S8, subtilisin, Asp-active site DOO79_10465 IPR036852 Peptidase S8/S53 domain superfamily DOO79_10475 IPR036852 Peptidase S8/S53 domain superfamily DOO79_10475 IPR000209 Peptidase S8/S53 domain DOO79_10475 IPR002884 P domain DOO79_10475 IPR008979 Galactose-binding-like domain superfamily DOO79_10475 IPR015500 Peptidase S8, subtilisin-related DOO79_10475 IPR023827 Peptidase S8, subtilisin, Asp-active site DOO79_10475 IPR023828 Peptidase S8, subtilisin, Ser-active site DOO79_10485 IPR039426 Vitamin B12 transporter BtuB-like DOO79_10485 IPR012910 TonB-dependent receptor, plug domain DOO79_10485 IPR000531 TonB-dependent receptor-like, beta-barrel DOO79_10485 IPR037066 TonB-dependent receptor, plug domain superfamily DOO79_10510 IPR001807 Chloride channel, voltage gated DOO79_10510 IPR014743 Chloride channel, core DOO79_10510 IPR023861 Chloride channel, ClcA DOO79_10520 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_10520 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily DOO79_10520 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site DOO79_10520 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding DOO79_10520 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain DOO79_10520 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain DOO79_10520 IPR023546 Methylated-DNA--protein-cysteine methyltransferase DOO79_10525 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily DOO79_10525 IPR000035 Alkylbase DNA glycosidase, conserved site DOO79_10525 IPR011257 DNA glycosylase DOO79_10525 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal DOO79_10525 IPR003265 HhH-GPD domain DOO79_10525 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal DOO79_10570 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain DOO79_10570 IPR014014 RNA helicase, DEAD-box type, Q motif DOO79_10570 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DOO79_10570 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_10570 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily DOO79_10570 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOO79_10570 IPR028618 ATP-dependent RNA helicase DeaD DOO79_10570 IPR034415 CsdA, RNA recognition motif DOO79_10570 IPR011545 DEAD/DEAH box helicase domain DOO79_10570 IPR001650 Helicase, C-terminal DOO79_10575 IPR001633 EAL domain DOO79_10575 IPR035919 EAL domain superfamily DOO79_10575 IPR000160 GGDEF domain DOO79_10575 IPR035965 PAS domain superfamily DOO79_10575 IPR000014 PAS domain DOO79_10575 IPR013656 PAS fold-4 DOO79_10575 IPR029787 Nucleotide cyclase DOO79_10580 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site DOO79_10580 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain DOO79_10580 IPR020103 Pseudouridine synthase, catalytic domain superfamily DOO79_10580 IPR006145 Pseudouridine synthase, RsuA/RluA DOO79_10580 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F DOO79_10580 IPR036986 RNA-binding S4 domain superfamily DOO79_10580 IPR002942 RNA-binding S4 domain DOO79_10585 IPR011006 CheY-like superfamily DOO79_10585 IPR001789 Signal transduction response regulator, receiver domain DOO79_10585 IPR029787 Nucleotide cyclase DOO79_10585 IPR000160 GGDEF domain DOO79_10605 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein DOO79_10605 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily DOO79_10605 IPR010203 Regulator of ribonuclease activity A DOO79_10610 IPR001466 Beta-lactamase-related DOO79_10610 IPR012338 Beta-lactamase/transpeptidase-like DOO79_10615 IPR006153 Cation/H+ exchanger DOO79_10615 IPR038770 Sodium/solute symporter superfamily DOO79_10620 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_10620 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_10620 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_10620 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOO79_10620 IPR003660 HAMP domain DOO79_10620 IPR005467 Histidine kinase domain DOO79_10620 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_10625 IPR001867 OmpR/PhoB-type DNA-binding domain DOO79_10625 IPR011006 CheY-like superfamily DOO79_10625 IPR039420 Transcriptional regulatory protein WalR-like DOO79_10625 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_10625 IPR001789 Signal transduction response regulator, receiver domain DOO79_10630 IPR010131 RND efflux system, outer membrane lipoprotein, NodT DOO79_10630 IPR003423 Outer membrane efflux protein DOO79_10645 IPR001036 Acriflavin resistance protein DOO79_10645 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DOO79_10660 IPR003439 ABC transporter-like DOO79_10660 IPR003593 AAA+ ATPase domain DOO79_10660 IPR011527 ABC transporter type 1, transmembrane domain DOO79_10660 IPR039421 Type I protein exporter DOO79_10660 IPR017871 ABC transporter, conserved site DOO79_10660 IPR036640 ABC transporter type 1, transmembrane domain superfamily DOO79_10660 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_10700 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase DOO79_10700 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain DOO79_10700 IPR029000 Cyclophilin-like domain superfamily DOO79_10700 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site DOO79_10705 IPR007211 Protein of unknown function DUF378 DOO79_10745 IPR013766 Thioredoxin domain DOO79_10745 IPR036249 Thioredoxin-like superfamily DOO79_10745 IPR011990 Tetratricopeptide-like helical domain superfamily DOO79_10770 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase DOO79_10770 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOO79_10770 IPR004821 Cytidyltransferase-like domain DOO79_10775 IPR004394 Protein Iojap/ribosomal silencing factor RsfS DOO79_10785 IPR029028 Alpha/beta knot methyltransferases DOO79_10785 IPR003742 RNA methyltransferase RlmH DOO79_10785 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DOO79_10805 IPR007497 Protein of unknown function DUF541 DOO79_10810 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein DOO79_10810 IPR029001 Inosine triphosphate pyrophosphatase-like DOO79_10815 IPR012340 Nucleic acid-binding, OB-fold DOO79_10815 IPR004659 Ribonuclease E/G DOO79_10815 IPR003029 S1 domain DOO79_10815 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G DOO79_10815 IPR022967 RNA-binding domain, S1 DOO79_10820 IPR011836 Conserved hypothetical protein CHP02099 DOO79_10820 IPR032712 AsmA-like, C-terminal DOO79_10820 IPR025263 Domain of unknown function DUF3971 DOO79_10830 IPR025502 TldD DOO79_10830 IPR002510 Metalloprotease TldD/PmbA DOO79_10830 IPR036059 Metalloprotease TldD/PmbA superfamily DOO79_10830 IPR035068 Metalloprotease TldD/PmbA, N-terminal DOO79_10835 IPR023153 PSPTO4464-like domain superfamily DOO79_10835 IPR006839 Ribosome-associated, YjgA DOO79_10840 IPR002510 Metalloprotease TldD/PmbA DOO79_10840 IPR036059 Metalloprotease TldD/PmbA superfamily DOO79_10840 IPR035068 Metalloprotease TldD/PmbA, N-terminal DOO79_10855 IPR004027 SEC-C motif DOO79_10855 IPR011978 Uncharacterised protein family UPF0149 DOO79_10855 IPR036255 YgfB-like superfamily DOO79_10885 IPR000092 Polyprenyl synthetase DOO79_10885 IPR033749 Polyprenyl synthetase, conserved site DOO79_10885 IPR008949 Isoprenoid synthase domain superfamily DOO79_10890 IPR037004 Exonuclease VII, small subunit superfamily DOO79_10890 IPR003761 Exonuclease VII, small subunit DOO79_10895 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain DOO79_10895 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal DOO79_10895 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal DOO79_10895 IPR012094 tRNA(Ile)-lysidine synthase DOO79_10895 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal DOO79_10895 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOO79_10905 IPR001952 Alkaline phosphatase DOO79_10905 IPR018299 Alkaline phosphatase, active site DOO79_10905 IPR017850 Alkaline-phosphatase-like, core domain superfamily DOO79_10910 IPR001991 Sodium:dicarboxylate symporter DOO79_10910 IPR018107 Sodium:dicarboxylate symporter, conserved site DOO79_10910 IPR036458 Sodium:dicarboxylate symporter superfamily DOO79_10910 IPR033380 Glutamate-aspartate symport protein GltP/GltT DOO79_10915 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOO79_10915 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC DOO79_10925 IPR000064 Endopeptidase, NLPC/P60 domain DOO79_10925 IPR038765 Papain-like cysteine peptidase superfamily DOO79_10930 IPR000064 Endopeptidase, NLPC/P60 domain DOO79_10930 IPR038765 Papain-like cysteine peptidase superfamily DOO79_10935 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DOO79_10940 IPR007349 Domain of unknown function DUF418 DOO79_10945 IPR036188 FAD/NAD(P)-binding domain superfamily DOO79_10945 IPR023080 D-amino acid dehydrogenase DadA DOO79_10945 IPR006076 FAD dependent oxidoreductase DOO79_10950 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DOO79_10950 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site DOO79_10950 IPR006322 Glutathione reductase, eukaryote/bacterial DOO79_10950 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily DOO79_10950 IPR023753 FAD/NAD(P)-binding domain DOO79_10950 IPR036188 FAD/NAD(P)-binding domain superfamily DOO79_10950 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I DOO79_10955 IPR008490 Transposase InsH, N-terminal DOO79_10960 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_10960 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding DOO79_10960 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain DOO79_10975 IPR000718 Peptidase M13 DOO79_10975 IPR024079 Metallopeptidase, catalytic domain superfamily DOO79_10975 IPR018497 Peptidase M13, C-terminal domain DOO79_10975 IPR042089 Peptidase M13, domain 2 DOO79_10975 IPR008753 Peptidase M13, N-terminal domain DOO79_10985 IPR042089 Peptidase M13, domain 2 DOO79_10985 IPR018497 Peptidase M13, C-terminal domain DOO79_10985 IPR000718 Peptidase M13 DOO79_10985 IPR024079 Metallopeptidase, catalytic domain superfamily DOO79_10985 IPR008753 Peptidase M13, N-terminal domain DOO79_10990 IPR036188 FAD/NAD(P)-binding domain superfamily DOO79_11005 IPR002513 Tn3 transposase DDE domain DOO79_11005 IPR025296 Domain of unknown function DUF4158 DOO79_11045 IPR006530 YD repeat DOO79_11045 IPR031325 RHS repeat DOO79_11045 IPR001826 RHS protein DOO79_11045 IPR022385 Rhs repeat-associated core DOO79_11075 IPR025948 HTH-like domain DOO79_11075 IPR001584 Integrase, catalytic core DOO79_11075 IPR036397 Ribonuclease H superfamily DOO79_11075 IPR012337 Ribonuclease H-like superfamily DOO79_11095 IPR008979 Galactose-binding-like domain superfamily DOO79_11095 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily DOO79_11095 IPR032311 Domain of unknown function DUF4982 DOO79_11095 IPR017853 Glycoside hydrolase superfamily DOO79_11095 IPR013783 Immunoglobulin-like fold DOO79_11095 IPR006103 Glycoside hydrolase family 2, catalytic domain DOO79_11095 IPR023232 Glycoside hydrolase, family 2, active site DOO79_11095 IPR006101 Glycoside hydrolase, family 2 DOO79_11095 IPR040605 Glycoside hydrolase family 2, domain 5 DOO79_11095 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich DOO79_11095 IPR008964 Invasin/intimin cell-adhesion fragments DOO79_11095 IPR006104 Glycosyl hydrolases family 2, sugar binding domain DOO79_11100 IPR011683 Glycosyl hydrolase family 53 DOO79_11100 IPR017853 Glycoside hydrolase superfamily DOO79_11110 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOO79_11110 IPR018653 Domain of unknown function DUF2083,transcriptional regulator DOO79_11110 IPR026281 HTH-type transcriptional regulator RamB DOO79_11110 IPR010359 IrrE N-terminal-like domain DOO79_11110 IPR001387 Cro/C1-type helix-turn-helix domain DOO79_11115 IPR016161 Aldehyde/histidinol dehydrogenase DOO79_11115 IPR016163 Aldehyde dehydrogenase, C-terminal DOO79_11115 IPR016160 Aldehyde dehydrogenase, cysteine active site DOO79_11115 IPR010061 Methylmalonate-semialdehyde dehydrogenase DOO79_11115 IPR015590 Aldehyde dehydrogenase domain DOO79_11115 IPR016162 Aldehyde dehydrogenase, N-terminal DOO79_11120 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DOO79_11120 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily DOO79_11120 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DOO79_11120 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DOO79_11120 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DOO79_11120 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DOO79_11120 IPR006089 Acyl-CoA dehydrogenase, conserved site DOO79_11125 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site DOO79_11125 IPR001753 Enoyl-CoA hydratase/isomerase DOO79_11125 IPR014748 Enoyl-CoA hydratase, C-terminal DOO79_11125 IPR029045 ClpP/crotonase-like domain superfamily DOO79_11130 IPR001753 Enoyl-CoA hydratase/isomerase DOO79_11130 IPR029045 ClpP/crotonase-like domain superfamily DOO79_11130 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOO79_11130 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal DOO79_11130 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site DOO79_11130 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding DOO79_11130 IPR012802 Fatty oxidation complex, alpha subunit FadJ DOO79_11130 IPR036291 NAD(P)-binding domain superfamily DOO79_11130 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site DOO79_11140 IPR027469 Cation efflux transmembrane domain superfamily DOO79_11140 IPR002524 Cation efflux protein DOO79_11140 IPR036837 Cation efflux protein, cytoplasmic domain superfamily DOO79_11145 IPR036291 NAD(P)-binding domain superfamily DOO79_11145 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding DOO79_11145 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal DOO79_11145 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOO79_11145 IPR029045 ClpP/crotonase-like domain superfamily DOO79_11145 IPR001753 Enoyl-CoA hydratase/isomerase DOO79_11145 IPR012802 Fatty oxidation complex, alpha subunit FadJ DOO79_11150 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site DOO79_11150 IPR014286 RNA polymerase sigma-70 RpoE type DOO79_11150 IPR013325 RNA polymerase sigma factor, region 2 DOO79_11150 IPR013324 RNA polymerase sigma factor, region 3/4-like DOO79_11150 IPR039425 RNA polymerase sigma-70 like DOO79_11150 IPR014284 RNA polymerase sigma-70 like domain DOO79_11150 IPR007627 RNA polymerase sigma-70 region 2 DOO79_11150 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_11150 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 DOO79_11160 IPR009003 Peptidase S1, PA clan DOO79_11160 IPR011782 Peptidase S1C, Do DOO79_11160 IPR001478 PDZ domain DOO79_11160 IPR036034 PDZ superfamily DOO79_11160 IPR001940 Peptidase S1C DOO79_11165 IPR031157 Tr-type G domain, conserved site DOO79_11165 IPR006297 Elongation factor 4 DOO79_11165 IPR035647 EF-G domain III/V-like DOO79_11165 IPR035654 Elongation factor 4, domain IV DOO79_11165 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_11165 IPR013842 GTP-binding protein LepA, C-terminal DOO79_11165 IPR038363 LepA, C-terminal domain superfamily DOO79_11165 IPR000795 Transcription factor, GTP-binding domain DOO79_11165 IPR004161 Translation elongation factor EFTu-like, domain 2 DOO79_11165 IPR000640 Elongation factor EFG, domain V-like DOO79_11165 IPR005225 Small GTP-binding protein domain DOO79_11170 IPR000223 Peptidase S26A, signal peptidase I DOO79_11170 IPR019533 Peptidase S26 DOO79_11170 IPR019756 Peptidase S26A, signal peptidase I, serine active site DOO79_11170 IPR036286 LexA/Signal peptidase-like superfamily DOO79_11170 IPR019758 Peptidase S26A, signal peptidase I, conserved site DOO79_11170 IPR019757 Peptidase S26A, signal peptidase I, lysine active site DOO79_11180 IPR011907 Ribonuclease III DOO79_11180 IPR036389 Ribonuclease III, endonuclease domain superfamily DOO79_11180 IPR014720 Double-stranded RNA-binding domain DOO79_11180 IPR000999 Ribonuclease III domain DOO79_11185 IPR005662 GTP-binding protein Era DOO79_11185 IPR004044 K Homology domain, type 2 DOO79_11185 IPR006073 GTP binding domain DOO79_11185 IPR005225 Small GTP-binding protein domain DOO79_11185 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_11185 IPR009019 K homology domain superfamily, prokaryotic type DOO79_11185 IPR030388 Era-type guanine nucleotide-binding (G) domain DOO79_11185 IPR015946 K homology domain-like, alpha/beta DOO79_11190 IPR003717 Recombination protein O, RecO DOO79_11190 IPR012340 Nucleic acid-binding, OB-fold DOO79_11190 IPR022572 DNA replication/recombination mediator RecO, N-terminal DOO79_11190 IPR037278 ARFGAP/RecO-like zinc finger DOO79_11200 IPR012340 Nucleic acid-binding, OB-fold DOO79_11200 IPR010280 (Uracil-5)-methyltransferase family DOO79_11200 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOO79_11200 IPR002792 TRAM domain DOO79_11200 IPR030391 RNA methyltransferase TrmA, conserved site DOO79_11200 IPR030390 RNA methyltransferase TrmA, active site DOO79_11200 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD DOO79_11210 IPR033469 CYTH-like domain superfamily DOO79_11210 IPR023577 CYTH domain DOO79_11210 IPR012042 Inorganic triphosphatase NeuTTM/CthTTM-like DOO79_11215 IPR001853 DSBA-like thioredoxin domain DOO79_11215 IPR036249 Thioredoxin-like superfamily DOO79_11220 IPR036188 FAD/NAD(P)-binding domain superfamily DOO79_11220 IPR034721 Bacterial renalase DOO79_11220 IPR002937 Amine oxidase DOO79_11225 IPR007357 Deoxyribodipyrimidine photolyase-related protein DOO79_11225 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOO79_11225 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily DOO79_11230 IPR017853 Glycoside hydrolase superfamily DOO79_11230 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily DOO79_11230 IPR001764 Glycoside hydrolase, family 3, N-terminal DOO79_11230 IPR019800 Glycoside hydrolase, family 3, active site DOO79_11230 IPR022956 Beta-hexosaminidase, bacterial DOO79_11240 IPR035994 Nucleoside phosphorylase superfamily DOO79_11240 IPR000845 Nucleoside phosphorylase domain DOO79_11240 IPR018099 Purine phosphorylase, family 2, conserved site DOO79_11240 IPR010044 Methylthioadenosine phosphorylase (MTAP) DOO79_11250 IPR012156 Cold shock, CspA DOO79_11250 IPR011129 Cold shock domain DOO79_11250 IPR019844 Cold-shock (CSD) domain DOO79_11250 IPR002059 Cold-shock protein, DNA-binding DOO79_11250 IPR012340 Nucleic acid-binding, OB-fold DOO79_11265 IPR011545 DEAD/DEAH box helicase domain DOO79_11265 IPR003593 AAA+ ATPase domain DOO79_11265 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOO79_11265 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_11265 IPR013701 DEAD/H associated DOO79_11265 IPR001650 Helicase, C-terminal DOO79_11270 IPR012309 DNA ligase, ATP-dependent, C-terminal DOO79_11270 IPR012308 DNA ligase, ATP-dependent, N-terminal DOO79_11270 IPR036599 DNA ligase, ATP-dependent, N-terminal domain superfamily DOO79_11270 IPR012340 Nucleic acid-binding, OB-fold DOO79_11270 IPR000977 DNA ligase, ATP-dependent DOO79_11270 IPR016059 DNA ligase, ATP-dependent, conserved site DOO79_11270 IPR012310 DNA ligase, ATP-dependent, central DOO79_11270 IPR022865 DNA ligase, ATP-dependent, bacterial/archaeal DOO79_11280 IPR012308 DNA ligase, ATP-dependent, N-terminal DOO79_11280 IPR000977 DNA ligase, ATP-dependent DOO79_11280 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOO79_11280 IPR012309 DNA ligase, ATP-dependent, C-terminal DOO79_11280 IPR036599 DNA ligase, ATP-dependent, N-terminal domain superfamily DOO79_11280 IPR012310 DNA ligase, ATP-dependent, central DOO79_11280 IPR016059 DNA ligase, ATP-dependent, conserved site DOO79_11280 IPR012340 Nucleic acid-binding, OB-fold DOO79_11310 IPR020616 Thiolase, N-terminal DOO79_11310 IPR002155 Thiolase DOO79_11310 IPR016039 Thiolase-like DOO79_11310 IPR020615 Thiolase, acyl-enzyme intermediate active site DOO79_11310 IPR020610 Thiolase, active site DOO79_11310 IPR020617 Thiolase, C-terminal DOO79_11310 IPR020613 Thiolase, conserved site DOO79_11320 IPR033524 Leu/Phe/Val dehydrogenases active site DOO79_11320 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal DOO79_11320 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain DOO79_11320 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal DOO79_11320 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase DOO79_11320 IPR036291 NAD(P)-binding domain superfamily DOO79_11335 IPR002725 Protein of unknown function DUF45 DOO79_11340 IPR009760 Protein of unknown function DUF1328 DOO79_11350 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria DOO79_11350 IPR000962 Zinc finger, DksA/TraR C4-type DOO79_11350 IPR020458 Zinc finger, DksA/TraR C4-type conserved site DOO79_11370 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DOO79_11380 IPR004624 PhnA protein DOO79_11380 IPR013988 PhnA protein, C-terminal DOO79_11380 IPR013987 PhnA protein, N-terminal DOO79_11395 IPR036259 MFS transporter superfamily DOO79_11395 IPR011701 Major facilitator superfamily DOO79_11395 IPR020846 Major facilitator superfamily domain DOO79_11425 IPR016181 Acyl-CoA N-acyltransferase DOO79_11425 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD DOO79_11425 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal DOO79_11435 IPR019897 RidA, conserved site DOO79_11435 IPR035959 RutC-like superfamily DOO79_11435 IPR006175 YjgF/YER057c/UK114 family DOO79_11435 IPR035709 RutC family, YoaB-like DOO79_11440 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOO79_11440 IPR003333 Mycolic acid cyclopropane synthase DOO79_11455 IPR003333 Mycolic acid cyclopropane synthase DOO79_11455 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOO79_11480 IPR013324 RNA polymerase sigma factor, region 3/4-like DOO79_11480 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_11480 IPR007630 RNA polymerase sigma-70 region 4 DOO79_11480 IPR007627 RNA polymerase sigma-70 region 2 DOO79_11480 IPR014284 RNA polymerase sigma-70 like domain DOO79_11480 IPR013325 RNA polymerase sigma factor, region 2 DOO79_11480 IPR039425 RNA polymerase sigma-70 like DOO79_11500 IPR007202 4Fe-4S domain DOO79_11500 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOO79_11500 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOO79_11500 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB DOO79_11500 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria DOO79_11510 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal DOO79_11510 IPR023458 Methionine-tRNA ligase, type 1 DOO79_11510 IPR014758 Methionyl-tRNA synthetase DOO79_11510 IPR033911 Methioninyl-tRNA synthetase core domain DOO79_11510 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOO79_11510 IPR029038 Methionyl-tRNA synthetase, Zn-domain DOO79_11510 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding DOO79_11510 IPR002547 tRNA-binding domain DOO79_11510 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain DOO79_11510 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DOO79_11510 IPR015413 Methionyl/Leucyl tRNA synthetase DOO79_11510 IPR012340 Nucleic acid-binding, OB-fold DOO79_11525 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_11525 IPR025302 Domain of unknown function DUF4162 DOO79_11525 IPR017871 ABC transporter, conserved site DOO79_11525 IPR003439 ABC transporter-like DOO79_11525 IPR003593 AAA+ ATPase domain DOO79_11530 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DOO79_11530 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOO79_11530 IPR037478 YwkD-like domain DOO79_11530 IPR037523 Vicinal oxygen chelate (VOC) domain DOO79_11535 IPR004841 Amino acid permease/ SLC12A domain DOO79_11535 IPR004840 Amino acid permease, conserved site DOO79_11540 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT DOO79_11540 IPR036589 Homocysteine-binding domain superfamily DOO79_11540 IPR003726 Homocysteine-binding domain DOO79_11550 IPR003744 Queuosine precursor transporter DOO79_11570 IPR036390 Winged helix DNA-binding domain superfamily DOO79_11570 IPR011991 ArsR-like helix-turn-helix domain DOO79_11570 IPR005149 Transcription regulator PadR, N-terminal DOO79_11570 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_11605 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal DOO79_11605 IPR001095 Acetyl-CoA carboxylase, alpha subunit DOO79_11605 IPR029045 ClpP/crotonase-like domain superfamily DOO79_11610 IPR040982 DNA polymerase III alpha subunit finger domain DOO79_11610 IPR016195 Polymerase/histidinol phosphatase-like DOO79_11610 IPR004013 PHP domain DOO79_11610 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain DOO79_11610 IPR004805 DNA polymerase III, alpha subunit DOO79_11610 IPR012340 Nucleic acid-binding, OB-fold DOO79_11610 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type DOO79_11610 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain DOO79_11610 IPR003141 Polymerase/histidinol phosphatase, N-terminal DOO79_11610 IPR029460 DNA polymerase, helix-hairpin-helix motif DOO79_11615 IPR022898 Ribonuclease HII DOO79_11615 IPR001352 Ribonuclease HII/HIII DOO79_11615 IPR024567 Ribonuclease HII/HIII domain DOO79_11615 IPR036397 Ribonuclease H superfamily DOO79_11615 IPR012337 Ribonuclease H-like superfamily DOO79_11620 IPR003835 Glycosyl transferase, family 19 DOO79_11625 IPR011004 Trimeric LpxA-like superfamily DOO79_11625 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase DOO79_11625 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily DOO79_11625 IPR001451 Hexapeptide repeat DOO79_11625 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal DOO79_11630 IPR029069 HotDog domain superfamily DOO79_11630 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ DOO79_11630 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ DOO79_11635 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region DOO79_11635 IPR001451 Hexapeptide repeat DOO79_11635 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD DOO79_11635 IPR011004 Trimeric LpxA-like superfamily DOO79_11645 IPR034746 POTRA domain DOO79_11645 IPR039910 Surface antigen D15-like DOO79_11645 IPR010827 POTRA domain, BamA/TamA-like DOO79_11645 IPR000184 Bacterial surface antigen (D15) DOO79_11645 IPR023707 Outer membrane protein assembly factor BamA DOO79_11650 IPR008915 Peptidase M50 DOO79_11650 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase DOO79_11650 IPR036034 PDZ superfamily DOO79_11650 IPR041489 PDZ domain 6 DOO79_11650 IPR001478 PDZ domain DOO79_11655 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase DOO79_11655 IPR036291 NAD(P)-binding domain superfamily DOO79_11655 IPR036169 DXP reductoisomerase, C-terminal domain superfamily DOO79_11655 IPR026877 DXP reductoisomerase C-terminal domain DOO79_11655 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal DOO79_11655 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal DOO79_11660 IPR000374 Phosphatidate cytidylyltransferase DOO79_11665 IPR036424 Decaprenyl diphosphate synthase-like superfamily DOO79_11665 IPR001441 Decaprenyl diphosphate synthase-like DOO79_11665 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site DOO79_11670 IPR002661 Ribosome recycling factor DOO79_11670 IPR036191 RRF superfamily DOO79_11670 IPR023584 Ribosome recycling factor domain DOO79_11675 IPR015963 Uridylate kinase, bacteria DOO79_11675 IPR036393 Acetylglutamate kinase-like superfamily DOO79_11675 IPR001048 Aspartate/glutamate/uridylate kinase DOO79_11675 IPR011817 Uridylate kinase DOO79_11680 IPR000160 GGDEF domain DOO79_11680 IPR029787 Nucleotide cyclase DOO79_11680 IPR001789 Signal transduction response regulator, receiver domain DOO79_11680 IPR011006 CheY-like superfamily DOO79_11685 IPR018101 Translation elongation factor Ts, conserved site DOO79_11685 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation DOO79_11685 IPR009060 UBA-like superfamily DOO79_11685 IPR001816 Translation elongation factor EFTs/EF1B DOO79_11685 IPR036402 Elongation factor Ts, dimerisation domain superfamily DOO79_11690 IPR001865 Ribosomal protein S2 DOO79_11690 IPR018130 Ribosomal protein S2, conserved site DOO79_11690 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily DOO79_11690 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid DOO79_11725 IPR001714 Peptidase M24, methionine aminopeptidase DOO79_11725 IPR000994 Peptidase M24 DOO79_11725 IPR036005 Creatinase/aminopeptidase-like DOO79_11725 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 DOO79_11730 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase DOO79_11730 IPR003607 HD/PDEase domain DOO79_11730 IPR006674 HD domain DOO79_11730 IPR002912 ACT domain DOO79_11730 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme DOO79_11730 IPR002934 Polymerase, nucleotidyl transferase domain DOO79_11735 IPR011004 Trimeric LpxA-like superfamily DOO79_11735 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily DOO79_11735 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 DOO79_11735 IPR001451 Hexapeptide repeat DOO79_11735 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family DOO79_11740 IPR006504 Transcriptional regulator Spx/MgsR DOO79_11740 IPR036249 Thioredoxin-like superfamily DOO79_11740 IPR006660 Arsenate reductase-like DOO79_11745 IPR002933 Peptidase M20 DOO79_11745 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site DOO79_11745 IPR011650 Peptidase M20, dimerisation domain DOO79_11745 IPR036264 Bacterial exopeptidase dimerisation domain DOO79_11745 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria DOO79_11750 IPR033738 Asparagine synthase, N-terminal domain DOO79_11750 IPR029055 Nucleophile aminohydrolases, N-terminal DOO79_11750 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOO79_11750 IPR001962 Asparagine synthase DOO79_11750 IPR006426 Asparagine synthase, glutamine-hydrolyzing DOO79_11750 IPR017932 Glutamine amidotransferase type 2 domain DOO79_11760 IPR010105 TonB-dependent siderophore receptor DOO79_11760 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DOO79_11760 IPR030148 Catecholate siderophore receptor Fiu DOO79_11760 IPR012910 TonB-dependent receptor, plug domain DOO79_11760 IPR000531 TonB-dependent receptor-like, beta-barrel DOO79_11760 IPR037066 TonB-dependent receptor, plug domain superfamily DOO79_11760 IPR039423 TonB-dependent receptor-like DOO79_11765 IPR029055 Nucleophile aminohydrolases, N-terminal DOO79_11765 IPR014395 Penicillin/GL-7-ACA/AHL acylase DOO79_11765 IPR023343 Penicillin amidase type, domain 1 DOO79_11765 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase DOO79_11770 IPR008331 Ferritin/DPS protein domain DOO79_11770 IPR009078 Ferritin-like superfamily DOO79_11770 IPR009040 Ferritin-like diiron domain DOO79_11770 IPR012347 Ferritin-like DOO79_11770 IPR002024 Bacterioferritin DOO79_11785 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta DOO79_11785 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily DOO79_11785 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative DOO79_11785 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal DOO79_11785 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat DOO79_11785 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DOO79_11785 IPR013760 DNA topoisomerase, type IIA-like domain superfamily DOO79_11800 IPR010131 RND efflux system, outer membrane lipoprotein, NodT DOO79_11800 IPR003423 Outer membrane efflux protein DOO79_11805 IPR005694 Efflux pump membrane protein DOO79_11805 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DOO79_11810 IPR020846 Major facilitator superfamily domain DOO79_11810 IPR011701 Major facilitator superfamily DOO79_11810 IPR036259 MFS transporter superfamily DOO79_11810 IPR004638 Drug resistance transporter EmrB-like DOO79_11820 IPR013783 Immunoglobulin-like fold DOO79_11820 IPR017853 Glycoside hydrolase superfamily DOO79_11820 IPR026891 Fibronectin type III-like domain DOO79_11820 IPR002772 Glycoside hydrolase family 3 C-terminal domain DOO79_11820 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily DOO79_11820 IPR001764 Glycoside hydrolase, family 3, N-terminal DOO79_11820 IPR019800 Glycoside hydrolase, family 3, active site DOO79_11820 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily DOO79_11835 IPR005279 Dipeptide/tripeptide permease DOO79_11835 IPR020846 Major facilitator superfamily domain DOO79_11835 IPR036259 MFS transporter superfamily DOO79_11835 IPR000109 Proton-dependent oligopeptide transporter family DOO79_11835 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site DOO79_11860 IPR036390 Winged helix DNA-binding domain superfamily DOO79_11860 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_11860 IPR000835 MarR-type HTH domain DOO79_11860 IPR023187 Transcriptional regulator MarR-type, conserved site DOO79_11865 IPR001567 Peptidase M3A/M3B catalytic domain DOO79_11865 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 DOO79_11875 IPR036249 Thioredoxin-like superfamily DOO79_11875 IPR029760 Glutathione peroxidase conserved site DOO79_11875 IPR029759 Glutathione peroxidase active site DOO79_11875 IPR000889 Glutathione peroxidase DOO79_11880 IPR017938 Riboflavin synthase-like beta-barrel DOO79_11880 IPR001433 Oxidoreductase FAD/NAD(P)-binding DOO79_11880 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DOO79_11880 IPR033892 Ferredoxin--NADP reductase, bacteria DOO79_11880 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase DOO79_11880 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain DOO79_11880 IPR017927 FAD-binding domain, ferredoxin reductase-type DOO79_11885 IPR036640 ABC transporter type 1, transmembrane domain superfamily DOO79_11885 IPR017871 ABC transporter, conserved site DOO79_11885 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_11885 IPR039421 Type I protein exporter DOO79_11885 IPR011527 ABC transporter type 1, transmembrane domain DOO79_11885 IPR003439 ABC transporter-like DOO79_11885 IPR003593 AAA+ ATPase domain DOO79_11890 IPR020557 Fumarate lyase, conserved site DOO79_11890 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain DOO79_11890 IPR011167 Iron-dependent fumarate hydratase DOO79_11890 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain DOO79_11890 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily DOO79_11905 IPR001765 Carbonic anhydrase DOO79_11905 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site DOO79_11905 IPR036874 Carbonic anhydrase superfamily DOO79_11910 IPR036541 Phospholipase A1 superfamily DOO79_11910 IPR003187 Phospholipase A1 DOO79_11920 IPR019844 Cold-shock (CSD) domain DOO79_11920 IPR012340 Nucleic acid-binding, OB-fold DOO79_11920 IPR012156 Cold shock, CspA DOO79_11920 IPR011129 Cold shock domain DOO79_11920 IPR002059 Cold-shock protein, DNA-binding DOO79_11935 IPR035985 Ubiquitin-activating enzyme DOO79_11935 IPR000594 THIF-type NAD/FAD binding fold DOO79_11940 IPR001130 TatD family DOO79_11940 IPR032466 Metal-dependent hydrolase DOO79_11940 IPR015991 Uncharacterised hydrolase TatD-type DOO79_11940 IPR018228 Deoxyribonuclease, TatD-related, conserved site DOO79_11955 IPR006089 Acyl-CoA dehydrogenase, conserved site DOO79_11955 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DOO79_11955 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DOO79_11955 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DOO79_11955 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DOO79_11955 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily DOO79_11955 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DOO79_11965 IPR036249 Thioredoxin-like superfamily DOO79_11965 IPR010987 Glutathione S-transferase, C-terminal-like DOO79_11965 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DOO79_11965 IPR004045 Glutathione S-transferase, N-terminal DOO79_11965 IPR004046 Glutathione S-transferase, C-terminal DOO79_11975 IPR029055 Nucleophile aminohydrolases, N-terminal DOO79_11975 IPR017932 Glutamine amidotransferase type 2 domain DOO79_11975 IPR033738 Asparagine synthase, N-terminal domain DOO79_11975 IPR001962 Asparagine synthase DOO79_11975 IPR006426 Asparagine synthase, glutamine-hydrolyzing DOO79_11980 IPR029039 Flavoprotein-like superfamily DOO79_11980 IPR005025 NADPH-dependent FMN reductase-like DOO79_11985 IPR003593 AAA+ ATPase domain DOO79_11985 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily DOO79_11985 IPR007692 DNA helicase, DnaB type DOO79_11985 IPR007694 DNA helicase, DnaB-like, C-terminal DOO79_11985 IPR007693 DNA helicase, DnaB-like, N-terminal DOO79_11985 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_11985 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal DOO79_11990 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily DOO79_11990 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain DOO79_11990 IPR002081 Cryptochrome/DNA photolyase class 1 DOO79_11990 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal DOO79_11990 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOO79_11990 IPR006050 DNA photolyase, N-terminal DOO79_11990 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily DOO79_12000 IPR028974 TSP type-3 repeat DOO79_12000 IPR008722 Outer membrane porin F, N-terminal DOO79_12000 IPR036737 OmpA-like domain superfamily DOO79_12000 IPR006690 Outer membrane protein, OmpA-like, conserved site DOO79_12000 IPR006664 Outer membrane protein, bacterial DOO79_12000 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DOO79_12000 IPR006665 OmpA-like domain DOO79_12010 IPR005119 LysR, substrate-binding DOO79_12010 IPR000847 Transcription regulator HTH, LysR DOO79_12010 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_12010 IPR036390 Winged helix DNA-binding domain superfamily DOO79_12025 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DOO79_12025 IPR006143 RND efflux pump, membrane fusion protein DOO79_12030 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 DOO79_12030 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DOO79_12030 IPR001036 Acriflavin resistance protein DOO79_12035 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOO79_12035 IPR002347 Short-chain dehydrogenase/reductase SDR DOO79_12035 IPR036291 NAD(P)-binding domain superfamily DOO79_12040 IPR003423 Outer membrane efflux protein DOO79_12040 IPR010131 RND efflux system, outer membrane lipoprotein, NodT DOO79_12045 IPR013656 PAS fold-4 DOO79_12045 IPR000700 PAS-associated, C-terminal DOO79_12045 IPR029787 Nucleotide cyclase DOO79_12045 IPR035965 PAS domain superfamily DOO79_12045 IPR000160 GGDEF domain DOO79_12045 IPR000014 PAS domain DOO79_12055 IPR029787 Nucleotide cyclase DOO79_12055 IPR000160 GGDEF domain DOO79_12080 IPR000209 Peptidase S8/S53 domain DOO79_12080 IPR022398 Peptidase S8, subtilisin, His-active site DOO79_12080 IPR023827 Peptidase S8, subtilisin, Asp-active site DOO79_12080 IPR036852 Peptidase S8/S53 domain superfamily DOO79_12080 IPR015500 Peptidase S8, subtilisin-related DOO79_12080 IPR023828 Peptidase S8, subtilisin, Ser-active site DOO79_12085 IPR020081 SsrA-binding protein, conserved site DOO79_12085 IPR023620 Small protein B DOO79_12085 IPR000037 SsrA-binding protein DOO79_12090 IPR023393 START-like domain superfamily DOO79_12090 IPR005031 Coenzyme Q-binding protein COQ10, START domain DOO79_12095 IPR037021 RnfH superfamily DOO79_12095 IPR005346 RnfH protein DOO79_12095 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp DOO79_12100 IPR026592 Outer membrane protein assembly factor BamE DOO79_12100 IPR037873 BamE-like DOO79_12100 IPR007450 Lipoprotein SmpA/OmlA DOO79_12105 IPR036390 Winged helix DNA-binding domain superfamily DOO79_12105 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_12105 IPR002481 Ferric-uptake regulator DOO79_12110 IPR004604 DNA recombination/repair protein RecN DOO79_12110 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_12110 IPR003395 RecF/RecN/SMC, N-terminal DOO79_12115 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_12115 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal DOO79_12115 IPR002571 Heat-inducible transcription repressor HrcA DOO79_12115 IPR029016 GAF-like domain superfamily DOO79_12115 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily DOO79_12115 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain DOO79_12115 IPR036390 Winged helix DNA-binding domain superfamily DOO79_12120 IPR013805 GrpE nucleotide exchange factor, coiled-coil DOO79_12120 IPR000740 GrpE nucleotide exchange factor DOO79_12120 IPR009012 GrpE nucleotide exchange factor, head DOO79_12125 IPR012725 Chaperone DnaK DOO79_12125 IPR013126 Heat shock protein 70 family DOO79_12125 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily DOO79_12125 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily DOO79_12125 IPR018181 Heat shock protein 70, conserved site DOO79_12130 IPR012724 Chaperone DnaJ DOO79_12130 IPR001623 DnaJ domain DOO79_12130 IPR036869 Chaperone J-domain superfamily DOO79_12130 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily DOO79_12130 IPR002939 Chaperone DnaJ, C-terminal DOO79_12130 IPR001305 Heat shock protein DnaJ, cysteine-rich domain DOO79_12130 IPR008971 HSP40/DnaJ peptide-binding DOO79_12140 IPR029056 Ribokinase-like DOO79_12140 IPR004625 Pyridoxine kinase DOO79_12140 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase DOO79_12140 IPR023479 Pyridoxine/pyridoxal/pyridoxamine kinase DOO79_12165 IPR010132 ATPase, type I secretion system, HlyB DOO79_12165 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_12165 IPR005074 Peptidase C39, bacteriocin processing DOO79_12165 IPR017871 ABC transporter, conserved site DOO79_12165 IPR036640 ABC transporter type 1, transmembrane domain superfamily DOO79_12165 IPR039395 Peptidase C39-like A DOO79_12165 IPR039421 Type I protein exporter DOO79_12165 IPR011527 ABC transporter type 1, transmembrane domain DOO79_12165 IPR003593 AAA+ ATPase domain DOO79_12165 IPR003439 ABC transporter-like DOO79_12170 IPR036390 Winged helix DNA-binding domain superfamily DOO79_12170 IPR005119 LysR, substrate-binding DOO79_12170 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_12170 IPR000847 Transcription regulator HTH, LysR DOO79_12175 IPR017871 ABC transporter, conserved site DOO79_12175 IPR011527 ABC transporter type 1, transmembrane domain DOO79_12175 IPR003593 AAA+ ATPase domain DOO79_12175 IPR003439 ABC transporter-like DOO79_12175 IPR011917 ABC transporter, lipid A export, MsbA DOO79_12175 IPR036640 ABC transporter type 1, transmembrane domain superfamily DOO79_12175 IPR039421 Type I protein exporter DOO79_12175 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_12180 IPR023582 Impact family DOO79_12180 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site DOO79_12180 IPR001498 Impact, N-terminal DOO79_12180 IPR020568 Ribosomal protein S5 domain 2-type fold DOO79_12180 IPR036956 Impact, N-terminal domain superfamily DOO79_12180 IPR035647 EF-G domain III/V-like DOO79_12185 IPR031100 LOG family DOO79_12185 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG DOO79_12190 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily DOO79_12190 IPR006258 Dihydrolipoamide dehydrogenase DOO79_12190 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I DOO79_12190 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DOO79_12190 IPR036188 FAD/NAD(P)-binding domain superfamily DOO79_12190 IPR023753 FAD/NAD(P)-binding domain DOO79_12190 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site DOO79_12195 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain DOO79_12195 IPR036625 E3-binding domain superfamily DOO79_12195 IPR004167 Peripheral subunit-binding domain DOO79_12195 IPR011053 Single hybrid motif DOO79_12195 IPR006255 Dihydrolipoamide succinyltransferase DOO79_12195 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site DOO79_12195 IPR000089 Biotin/lipoyl attachment DOO79_12195 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily DOO79_12200 IPR005475 Transketolase-like, pyrimidine-binding domain DOO79_12200 IPR029061 Thiamin diphosphate-binding fold DOO79_12200 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily DOO79_12200 IPR001017 Dehydrogenase, E1 component DOO79_12200 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal DOO79_12200 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain DOO79_12200 IPR011603 2-oxoglutarate dehydrogenase E1 component DOO79_12210 IPR003347 JmjC domain DOO79_12210 IPR039994 JmjC domain-containing DOO79_12220 IPR000362 Fumarate lyase family DOO79_12220 IPR020557 Fumarate lyase, conserved site DOO79_12220 IPR024083 Fumarase/histidase, N-terminal DOO79_12220 IPR022761 Fumarate lyase, N-terminal DOO79_12220 IPR008948 L-Aspartase-like DOO79_12220 IPR004769 Adenylosuccinate lyase DOO79_12220 IPR013539 Adenylosuccinate lyase PurB, C-terminal DOO79_12230 IPR000644 CBS domain DOO79_12230 IPR002550 CNNM, transmembrane domain DOO79_12230 IPR036318 FAD-binding, type PCMH-like superfamily DOO79_12230 IPR005170 Transporter-associated domain DOO79_12230 IPR016169 FAD-binding, type PCMH, subdomain 2 DOO79_12235 IPR024083 Fumarase/histidase, N-terminal DOO79_12235 IPR018951 Fumarase C, C-terminal DOO79_12235 IPR020557 Fumarate lyase, conserved site DOO79_12235 IPR000362 Fumarate lyase family DOO79_12235 IPR005677 Fumarate hydratase, class II DOO79_12235 IPR008948 L-Aspartase-like DOO79_12235 IPR022761 Fumarate lyase, N-terminal DOO79_12260 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_12260 IPR003439 ABC transporter-like DOO79_12260 IPR003593 AAA+ ATPase domain DOO79_12265 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_12265 IPR000524 Transcription regulator HTH, GntR DOO79_12265 IPR036390 Winged helix DNA-binding domain superfamily DOO79_12275 IPR036249 Thioredoxin-like superfamily DOO79_12275 IPR029759 Glutathione peroxidase active site DOO79_12275 IPR000889 Glutathione peroxidase DOO79_12275 IPR029760 Glutathione peroxidase conserved site DOO79_12280 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal DOO79_12280 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DOO79_12280 IPR008104 Macrophage infectivity potentiator DOO79_12280 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily DOO79_12285 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOO79_12285 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type DOO79_12285 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal DOO79_12285 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation DOO79_12285 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily DOO79_12285 IPR017476 UDP-glucose/GDP-mannose dehydrogenase DOO79_12285 IPR036291 NAD(P)-binding domain superfamily DOO79_12285 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal DOO79_12290 IPR007236 SlyX DOO79_12305 IPR000843 LacI-type HTH domain DOO79_12305 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOO79_12305 IPR023588 Transcription regulator HTH, PurR DOO79_12305 IPR028082 Periplasmic binding protein-like I DOO79_12310 IPR036259 MFS transporter superfamily DOO79_12310 IPR005964 Bacterial glucose/galactose transporter DOO79_12310 IPR011701 Major facilitator superfamily DOO79_12315 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site DOO79_12315 IPR011611 Carbohydrate kinase PfkB DOO79_12315 IPR002139 Ribokinase/fructokinase DOO79_12315 IPR029056 Ribokinase-like DOO79_12340 IPR036589 Homocysteine-binding domain superfamily DOO79_12340 IPR000489 Pterin-binding domain DOO79_12340 IPR011005 Dihydropteroate synthase-like DOO79_12340 IPR003726 Homocysteine-binding domain DOO79_12345 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOO79_12345 IPR023576 UbiE/COQ5 methyltransferase, conserved site DOO79_12345 IPR004033 UbiE/COQ5 methyltransferase DOO79_12350 IPR006089 Acyl-CoA dehydrogenase, conserved site DOO79_12350 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DOO79_12350 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DOO79_12350 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DOO79_12350 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DOO79_12350 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily DOO79_12350 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DOO79_12355 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DOO79_12355 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DOO79_12355 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DOO79_12355 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DOO79_12355 IPR006089 Acyl-CoA dehydrogenase, conserved site DOO79_12355 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily DOO79_12355 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DOO79_12375 IPR004476 Ribonuclease II/ribonuclease R DOO79_12375 IPR012340 Nucleic acid-binding, OB-fold DOO79_12375 IPR001900 Ribonuclease II/R DOO79_12375 IPR013223 Ribonuclease B, N-terminal OB domain DOO79_12375 IPR040476 RNase II/RNase R, cold shock domain DOO79_12375 IPR011129 Cold shock domain DOO79_12375 IPR022966 Ribonuclease II/R, conserved site DOO79_12375 IPR011805 Ribonuclease R DOO79_12375 IPR003029 S1 domain DOO79_12375 IPR022967 RNA-binding domain, S1 DOO79_12375 IPR013668 Ribonuclease R winged-helix domain DOO79_12385 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB DOO79_12385 IPR029028 Alpha/beta knot methyltransferases DOO79_12385 IPR004441 RNA methyltransferase TrmH family DOO79_12385 IPR001537 tRNA/rRNA methyltransferase, SpoU type DOO79_12385 IPR013123 RNA 2-O ribose methyltransferase, substrate binding DOO79_12385 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DOO79_12385 IPR029064 50S ribosomal protein L30e-like DOO79_12390 IPR000160 GGDEF domain DOO79_12390 IPR029787 Nucleotide cyclase DOO79_12390 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region DOO79_12395 IPR005987 Ribonuclease T DOO79_12395 IPR012337 Ribonuclease H-like superfamily DOO79_12395 IPR036397 Ribonuclease H superfamily DOO79_12395 IPR013520 Exonuclease, RNase T/DNA polymerase III DOO79_12405 IPR028366 Phosphate transport system protein PhoU DOO79_12405 IPR038078 PhoU-like domain superfamily DOO79_12405 IPR026022 PhoU domain DOO79_12410 IPR015850 ABC transporter, phosphate import, PstB DOO79_12410 IPR017871 ABC transporter, conserved site DOO79_12410 IPR003439 ABC transporter-like DOO79_12410 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_12410 IPR005670 Phosphate transport system permease protein 1 DOO79_12410 IPR003593 AAA+ ATPase domain DOO79_12415 IPR035906 MetI-like superfamily DOO79_12415 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOO79_12415 IPR005672 Phosphate transport system permease protein PstA DOO79_12420 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOO79_12420 IPR011864 Phosphate ABC transporter, permease protein PstC DOO79_12420 IPR035906 MetI-like superfamily DOO79_12425 IPR024370 PBP domain DOO79_12425 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS DOO79_12430 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS DOO79_12430 IPR024370 PBP domain DOO79_12450 IPR011547 SLC26A/SulP transporter domain DOO79_12450 IPR036513 STAS domain superfamily DOO79_12450 IPR002645 STAS domain DOO79_12450 IPR001902 SLC26A/SulP transporter DOO79_12455 IPR011257 DNA glycosylase DOO79_12455 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif DOO79_12455 IPR004035 Endonuclease III, iron-sulphur binding site DOO79_12455 IPR004036 Endonuclease III-like, conserved site-2 DOO79_12455 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal DOO79_12455 IPR005759 Endonuclease III DOO79_12455 IPR000445 Helix-hairpin-helix motif DOO79_12455 IPR003265 HhH-GPD domain DOO79_12465 IPR014748 Enoyl-CoA hydratase, C-terminal DOO79_12465 IPR001753 Enoyl-CoA hydratase/isomerase DOO79_12465 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site DOO79_12465 IPR029045 ClpP/crotonase-like domain superfamily DOO79_12470 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily DOO79_12470 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal DOO79_12470 IPR008104 Macrophage infectivity potentiator DOO79_12470 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DOO79_12475 IPR015797 NUDIX hydrolase-like domain superfamily DOO79_12475 IPR000086 NUDIX hydrolase domain DOO79_12475 IPR023735 Uncharacterised nudix hydrolase NudL DOO79_12475 IPR000059 NUDIX hydrolase, NudL, conserved site DOO79_12480 IPR036873 Rhodanese-like domain superfamily DOO79_12480 IPR001763 Rhodanese-like domain DOO79_12525 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily DOO79_12525 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal DOO79_12525 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal DOO79_12525 IPR002504 NAD kinase DOO79_12550 IPR012337 Ribonuclease H-like superfamily DOO79_12550 IPR036397 Ribonuclease H superfamily DOO79_12550 IPR013620 Exodeoxyribonuclease I, C-terminal DOO79_12550 IPR034747 Exonuclease I, SH3-like domain DOO79_12550 IPR023607 Exodeoxyribonuclease I DOO79_12550 IPR034748 Exonuclease I, C-terminal alpha-helical domain DOO79_12550 IPR013520 Exonuclease, RNase T/DNA polymerase III DOO79_12550 IPR038649 Exonuclease I, SH3-like domain superfamily DOO79_12560 IPR027545 Kynurenine 3-monooxygenase DOO79_12560 IPR036188 FAD/NAD(P)-binding domain superfamily DOO79_12560 IPR002938 FAD-binding domain DOO79_12565 IPR015424 Pyridoxal phosphate-dependent transferase DOO79_12565 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOO79_12565 IPR010111 Kynureninase DOO79_12565 IPR000192 Aminotransferase class V domain DOO79_12565 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOO79_12575 IPR010329 3-hydroxyanthranilic acid dioxygenase DOO79_12575 IPR014710 RmlC-like jelly roll fold DOO79_12575 IPR011051 RmlC-like cupin domain superfamily DOO79_12580 IPR001765 Carbonic anhydrase DOO79_12580 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site DOO79_12580 IPR036874 Carbonic anhydrase superfamily DOO79_12625 IPR001789 Signal transduction response regulator, receiver domain DOO79_12625 IPR016032 Signal transduction response regulator, C-terminal effector DOO79_12625 IPR011006 CheY-like superfamily DOO79_12625 IPR000792 Transcription regulator LuxR, C-terminal DOO79_12645 IPR012349 FMN-binding split barrel DOO79_12645 IPR007396 Transcriptional regulator PAI 2-type DOO79_12665 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type DOO79_12665 IPR006195 Aminoacyl-tRNA synthetase, class II DOO79_12665 IPR012340 Nucleic acid-binding, OB-fold DOO79_12665 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb DOO79_12665 IPR004522 Asparagine-tRNA ligase DOO79_12665 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) DOO79_12675 IPR035903 HesB-like domain superfamily DOO79_12675 IPR017870 FeS cluster insertion, C-terminal, conserved site DOO79_12675 IPR016092 FeS cluster insertion protein DOO79_12675 IPR000361 FeS cluster biogenesis DOO79_12680 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 DOO79_12680 IPR035980 Ribosomal protein S6 superfamily DOO79_12680 IPR020814 Ribosomal protein S6, plastid/chloroplast DOO79_12680 IPR000529 Ribosomal protein S6 DOO79_12685 IPR001648 Ribosomal protein S18 DOO79_12685 IPR036870 Ribosomal protein S18 superfamily DOO79_12685 IPR018275 Ribosomal protein S18, conserved site DOO79_12690 IPR020070 Ribosomal protein L9, N-terminal DOO79_12690 IPR000244 Ribosomal protein L9 DOO79_12690 IPR020594 Ribosomal protein L9, bacteria/chloroplast DOO79_12690 IPR036935 Ribosomal protein L9, N-terminal domain superfamily DOO79_12690 IPR009027 Ribosomal protein L9/RNase H1, N-terminal DOO79_12690 IPR036791 Ribosomal protein L9, C-terminal domain superfamily DOO79_12690 IPR020069 Ribosomal protein L9, C-terminal DOO79_12695 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_12695 IPR036277 SMCs flexible hinge superfamily DOO79_12695 IPR010935 SMCs flexible hinge DOO79_12695 IPR003395 RecF/RecN/SMC, N-terminal DOO79_12695 IPR024704 Structural maintenance of chromosomes protein DOO79_12695 IPR011890 Structural maintenance of chromosomes protein, prokaryotic DOO79_12700 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily DOO79_12700 IPR007449 ZipA, C-terminal FtsZ-binding domain DOO79_12700 IPR011919 Cell division protein ZipA DOO79_12710 IPR015424 Pyridoxal phosphate-dependent transferase DOO79_12710 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOO79_12710 IPR005861 Histidinol-phosphate aminotransferase family DOO79_12710 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site DOO79_12710 IPR004839 Aminotransferase, class I/classII DOO79_12710 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOO79_12715 IPR012340 Nucleic acid-binding, OB-fold DOO79_12715 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type DOO79_12715 IPR013840 NAD-dependent DNA ligase, N-terminal DOO79_12715 IPR004150 NAD-dependent DNA ligase, OB-fold DOO79_12715 IPR013839 NAD-dependent DNA ligase, adenylation DOO79_12715 IPR001357 BRCT domain DOO79_12715 IPR018239 NAD-dependent DNA ligase, active site DOO79_12715 IPR001679 NAD-dependent DNA ligase DOO79_12715 IPR036420 BRCT domain superfamily DOO79_12715 IPR010994 RuvA domain 2-like DOO79_12715 IPR041663 DisA/LigA, helix-hairpin-helix motif DOO79_12720 IPR006195 Aminoacyl-tRNA synthetase, class II DOO79_12720 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal DOO79_12720 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) DOO79_12720 IPR004525 Elongation factor P--(R)-beta-lysine ligase DOO79_12735 IPR037171 NagB/RpiA transferase-like DOO79_12735 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal DOO79_12735 IPR011559 Initiation factor 2B alpha/beta/delta DOO79_12735 IPR005251 Methylthioribose-1-phosphate isomerase DOO79_12735 IPR000649 Initiation factor 2B-related DOO79_12740 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta DOO79_12740 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DOO79_12740 IPR013760 DNA topoisomerase, type IIA-like domain superfamily DOO79_12740 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat DOO79_12740 IPR005743 DNA gyrase, subunit A DOO79_12740 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily DOO79_12740 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal DOO79_12745 IPR002372 Pyrrolo-quinoline quinone repeat DOO79_12745 IPR017511 PQQ-dependent membrane bound dehydrogenase DOO79_12745 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DOO79_12745 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily DOO79_12755 IPR036190 Urocanase superfamily DOO79_12755 IPR035085 Urocanase, Rossmann-like domain DOO79_12755 IPR035400 Urocanase, N-terminal domain DOO79_12755 IPR023636 Urocanase conserved site DOO79_12755 IPR035401 Urocanase, C-terminal domain DOO79_12755 IPR023637 Urocanase DOO79_12755 IPR038364 Urocanase, central domain superfamily DOO79_12765 IPR024083 Fumarase/histidase, N-terminal DOO79_12765 IPR005921 Histidine ammonia-lyase DOO79_12765 IPR001106 Aromatic amino acid lyase DOO79_12765 IPR022313 Phenylalanine/histidine ammonia-lyases, active site DOO79_12765 IPR008948 L-Aspartase-like DOO79_12770 IPR032466 Metal-dependent hydrolase DOO79_12770 IPR013108 Amidohydrolase 3 DOO79_12770 IPR005920 Imidazolonepropionase DOO79_12770 IPR011059 Metal-dependent hydrolase, composite domain superfamily DOO79_12785 IPR036390 Winged helix DNA-binding domain superfamily DOO79_12785 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_12785 IPR011663 UbiC transcription regulator-associated DOO79_12785 IPR000524 Transcription regulator HTH, GntR DOO79_12785 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DOO79_12785 IPR010248 Histidine utilization repressor DOO79_12810 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ DOO79_12810 IPR013130 Ferric reductase transmembrane component-like domain DOO79_12815 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily DOO79_12815 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP DOO79_12815 IPR000572 Oxidoreductase, molybdopterin-binding domain DOO79_12820 IPR015424 Pyridoxal phosphate-dependent transferase DOO79_12820 IPR000192 Aminotransferase class V domain DOO79_12820 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOO79_12820 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOO79_12820 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DOO79_12820 IPR022278 Phosphoserine aminotransferase DOO79_12825 IPR001086 Prephenate dehydratase DOO79_12825 IPR018528 Prephenate dehydratase, conserved site DOO79_12825 IPR002701 Chorismate mutase II, prokaryotic-type DOO79_12825 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain DOO79_12825 IPR002912 ACT domain DOO79_12825 IPR036979 Chorismate mutase domain superfamily DOO79_12825 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase DOO79_12825 IPR036263 Chorismate mutase type II superfamily DOO79_12830 IPR001986 Enolpyruvate transferase domain DOO79_12830 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta DOO79_12830 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site DOO79_12830 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase DOO79_12830 IPR036968 Enolpyruvate transferase domain superfamily DOO79_12840 IPR037682 TonB, C-terminal DOO79_12840 IPR006260 TonB/TolA, C-terminal DOO79_12845 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm DOO79_12845 IPR006195 Aminoacyl-tRNA synthetase, class II DOO79_12845 IPR002317 Serine-tRNA ligase, type1 DOO79_12845 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) DOO79_12845 IPR015866 Serine-tRNA synthetase, type1, N-terminal DOO79_12845 IPR033729 Serine-tRNA ligase catalytic core domain DOO79_12845 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily DOO79_12850 IPR003680 Flavodoxin-like fold DOO79_12850 IPR023048 NADH-azoreductase, FMN-dependent DOO79_12850 IPR029039 Flavoprotein-like superfamily DOO79_12855 IPR036390 Winged helix DNA-binding domain superfamily DOO79_12855 IPR005119 LysR, substrate-binding DOO79_12855 IPR000847 Transcription regulator HTH, LysR DOO79_12855 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_12880 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DOO79_12880 IPR003660 HAMP domain DOO79_12880 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DOO79_12880 IPR004090 Chemotaxis methyl-accepting receptor DOO79_12880 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DOO79_12880 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DOO79_12885 IPR036188 FAD/NAD(P)-binding domain superfamily DOO79_12885 IPR002938 FAD-binding domain DOO79_12900 IPR000014 PAS domain DOO79_12900 IPR035965 PAS domain superfamily DOO79_12900 IPR013656 PAS fold-4 DOO79_12900 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOO79_12900 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_12900 IPR005467 Histidine kinase domain DOO79_12900 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_12900 IPR001789 Signal transduction response regulator, receiver domain DOO79_12900 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_12900 IPR011006 CheY-like superfamily DOO79_12900 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_12905 IPR019247 Histidine kinase BarA, N-terminal DOO79_12905 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain DOO79_12905 IPR001789 Signal transduction response regulator, receiver domain DOO79_12905 IPR011006 CheY-like superfamily DOO79_12905 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_12905 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_12905 IPR005467 Histidine kinase domain DOO79_12905 IPR003660 HAMP domain DOO79_12905 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_12905 IPR036641 HPT domain superfamily DOO79_12905 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_12905 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOO79_12915 IPR010624 KaiC domain DOO79_12915 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_12915 IPR014774 KaiC-like domain DOO79_12915 IPR030665 Circadian clock protein kinase KaiC DOO79_12915 IPR003593 AAA+ ATPase domain DOO79_12920 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOO79_12920 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_12920 IPR001610 PAC motif DOO79_12920 IPR000014 PAS domain DOO79_12920 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_12920 IPR000700 PAS-associated, C-terminal DOO79_12920 IPR005467 Histidine kinase domain DOO79_12920 IPR035965 PAS domain superfamily DOO79_12920 IPR011006 CheY-like superfamily DOO79_12920 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_12920 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_12920 IPR001789 Signal transduction response regulator, receiver domain DOO79_12930 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily DOO79_12930 IPR005616 CcmH/CycL/Ccl2/NrfF family DOO79_12935 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE DOO79_12935 IPR013740 Redoxin DOO79_12935 IPR036249 Thioredoxin-like superfamily DOO79_12935 IPR017937 Thioredoxin, conserved site DOO79_12935 IPR013766 Thioredoxin domain DOO79_12940 IPR003568 Cytochrome c-type biogenesis protein CcmF DOO79_12940 IPR003567 Cytochrome c-type biogenesis protein DOO79_12940 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal DOO79_12940 IPR002541 Cytochrome c assembly protein DOO79_12945 IPR004329 CcmE/CycJ protein DOO79_12945 IPR036127 CcmE-like superfamily DOO79_12955 IPR002541 Cytochrome c assembly protein DOO79_12955 IPR003557 Cytochrome c-type biogenesis protein CcmC DOO79_12960 IPR000209 Peptidase S8/S53 domain DOO79_12960 IPR034084 Thermitase-like, domain DOO79_12960 IPR023828 Peptidase S8, subtilisin, Ser-active site DOO79_12960 IPR036852 Peptidase S8/S53 domain superfamily DOO79_12960 IPR015500 Peptidase S8, subtilisin-related DOO79_12960 IPR023827 Peptidase S8, subtilisin, Asp-active site DOO79_12960 IPR022398 Peptidase S8, subtilisin, His-active site DOO79_12970 IPR013324 RNA polymerase sigma factor, region 3/4-like DOO79_12970 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_12970 IPR014284 RNA polymerase sigma-70 like domain DOO79_12970 IPR013325 RNA polymerase sigma factor, region 2 DOO79_12970 IPR014286 RNA polymerase sigma-70 RpoE type DOO79_12970 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 DOO79_12970 IPR039425 RNA polymerase sigma-70 like DOO79_12970 IPR007627 RNA polymerase sigma-70 region 2 DOO79_12970 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site DOO79_12985 IPR036909 Cytochrome c-like domain superfamily DOO79_12985 IPR002327 Cytochrome c, class IA/ IB DOO79_12985 IPR009056 Cytochrome c-like domain DOO79_13000 IPR011051 RmlC-like cupin domain superfamily DOO79_13000 IPR008894 WxcM-like, C-terminal DOO79_13000 IPR014710 RmlC-like jelly roll fold DOO79_13020 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOO79_13020 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOO79_13020 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DOO79_13020 IPR015424 Pyridoxal phosphate-dependent transferase DOO79_13025 IPR032896 Lipid III flippase WzxE DOO79_13025 IPR002797 Polysaccharide biosynthesis protein DOO79_13030 IPR029044 Nucleotide-diphospho-sugar transferases DOO79_13030 IPR001173 Glycosyltransferase 2-like DOO79_13045 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOO79_13045 IPR013216 Methyltransferase type 11 DOO79_13060 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOO79_13060 IPR004498 Ribosomal protein L11 methyltransferase DOO79_13085 IPR003439 ABC transporter-like DOO79_13085 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_13085 IPR015854 ABC transporter, lipoprotein release, LolD DOO79_13085 IPR003593 AAA+ ATPase domain DOO79_13085 IPR011924 Lipoprotein releasing system, ATP-binding protein DOO79_13085 IPR017871 ABC transporter, conserved site DOO79_13090 IPR003593 AAA+ ATPase domain DOO79_13090 IPR011527 ABC transporter type 1, transmembrane domain DOO79_13090 IPR036640 ABC transporter type 1, transmembrane domain superfamily DOO79_13090 IPR003439 ABC transporter-like DOO79_13090 IPR017871 ABC transporter, conserved site DOO79_13090 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_13090 IPR011917 ABC transporter, lipid A export, MsbA DOO79_13090 IPR039421 Type I protein exporter DOO79_13095 IPR036259 MFS transporter superfamily DOO79_13095 IPR020846 Major facilitator superfamily domain DOO79_13095 IPR011701 Major facilitator superfamily DOO79_13095 IPR005829 Sugar transporter, conserved site DOO79_13100 IPR011251 Luciferase-like domain DOO79_13100 IPR036661 Luciferase-like domain superfamily DOO79_13100 IPR019949 Luciferase family oxidoreductase, group 1 DOO79_13115 IPR002550 CNNM, transmembrane domain DOO79_13115 IPR036318 FAD-binding, type PCMH-like superfamily DOO79_13115 IPR000644 CBS domain DOO79_13115 IPR016169 FAD-binding, type PCMH, subdomain 2 DOO79_13115 IPR005170 Transporter-associated domain DOO79_13130 IPR001204 Phosphate transporter DOO79_13150 IPR020568 Ribosomal protein S5 domain 2-type fold DOO79_13150 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative DOO79_13150 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 DOO79_13150 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_13150 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_13150 IPR006171 TOPRIM domain DOO79_13150 IPR002288 DNA gyrase B subunit, C-terminal DOO79_13150 IPR018522 DNA topoisomerase, type IIA, conserved site DOO79_13150 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOO79_13150 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal DOO79_13150 IPR001241 DNA topoisomerase, type IIA DOO79_13150 IPR013760 DNA topoisomerase, type IIA-like domain superfamily DOO79_13160 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_13160 IPR029062 Class I glutamine amidotransferase-like DOO79_13160 IPR033828 CTP synthase GATase domain DOO79_13160 IPR004468 CTP synthase DOO79_13160 IPR017456 CTP synthase, N-terminal DOO79_13160 IPR017926 Glutamine amidotransferase DOO79_13165 IPR006218 DAHP synthetase I/KDSA DOO79_13165 IPR013785 Aldolase-type TIM barrel DOO79_13165 IPR006269 3-deoxy-8-phosphooctulonate synthase DOO79_13175 IPR020811 Enolase, N-terminal DOO79_13175 IPR000941 Enolase DOO79_13175 IPR036849 Enolase-like, C-terminal domain superfamily DOO79_13175 IPR020810 Enolase, C-terminal TIM barrel domain DOO79_13175 IPR029017 Enolase-like, N-terminal DOO79_13175 IPR020809 Enolase, conserved site DOO79_13180 IPR007060 Septum formation initiator FtsL/DivIC DOO79_13180 IPR023081 Cell division protein FtsB DOO79_13185 IPR034683 Cytidylyltransferase IspD/TarI DOO79_13185 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site DOO79_13185 IPR029044 Nucleotide-diphospho-sugar transferases DOO79_13185 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DOO79_13190 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase DOO79_13190 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site DOO79_13190 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily DOO79_13195 IPR042214 Pseudouridine synthase, TruD, catalytic domain DOO79_13195 IPR001656 Pseudouridine synthase, TruD DOO79_13195 IPR020103 Pseudouridine synthase, catalytic domain superfamily DOO79_13195 IPR020119 Pseudouridine synthase TruD, conserved site DOO79_13195 IPR011760 Pseudouridine synthase, TruD, insertion domain DOO79_13200 IPR036063 Smr domain superfamily DOO79_13200 IPR022990 Uncharacterised protein family UPF0115 DOO79_13200 IPR002625 Smr domain DOO79_13205 IPR036523 SurE-like phosphatase/nucleotidase superfamily DOO79_13205 IPR030048 Survival protein SurE DOO79_13205 IPR002828 Survival protein SurE-like phosphatase/nucleotidase DOO79_13210 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOO79_13210 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase DOO79_13215 IPR032816 SNARE associated Golgi protein DOO79_13220 IPR018392 LysM domain DOO79_13220 IPR016047 Peptidase M23 DOO79_13220 IPR036779 LysM domain superfamily DOO79_13220 IPR011055 Duplicated hybrid motif DOO79_13225 IPR007523 NDUFAF3/Mth938 domain-containing protein DOO79_13225 IPR036748 MTH938-like superfamily DOO79_13230 IPR001890 RNA-binding, CRM domain DOO79_13230 IPR035920 YhbY-like superfamily DOO79_13230 IPR017924 RNA-binding protein YhbY DOO79_13235 IPR002877 Ribosomal RNA methyltransferase FtsJ domain DOO79_13235 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOO79_13235 IPR015507 Ribosomal RNA large subunit methyltransferase E DOO79_13240 IPR003593 AAA+ ATPase domain DOO79_13240 IPR041569 AAA ATPase, AAA+ lid domain DOO79_13240 IPR005936 Peptidase, FtsH DOO79_13240 IPR003960 ATPase, AAA-type, conserved site DOO79_13240 IPR000642 Peptidase M41 DOO79_13240 IPR011546 Peptidase M41, FtsH extracellular DOO79_13240 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_13240 IPR037219 Peptidase M41-like DOO79_13240 IPR003959 ATPase, AAA-type, core DOO79_13245 IPR000489 Pterin-binding domain DOO79_13245 IPR011005 Dihydropteroate synthase-like DOO79_13245 IPR006390 Dihydropteroate synthase DOO79_13250 IPR039657 Dimethylallyltransferase DOO79_13250 IPR018022 IPP transferase DOO79_13250 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_13255 IPR010920 LSM domain superfamily DOO79_13255 IPR005001 RNA-binding protein Hfq DOO79_13260 IPR016496 GTPase HflX DOO79_13260 IPR025121 GTPase HflX, N-terminal DOO79_13260 IPR006073 GTP binding domain DOO79_13260 IPR035647 EF-G domain III/V-like DOO79_13260 IPR042108 GTPase HflX, N-terminal domain superfamily DOO79_13260 IPR030394 HflX-type guanine nucleotide-binding (G) domain DOO79_13260 IPR032305 GTP-binding protein, middle domain DOO79_13260 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_13265 IPR008136 CinA, C-terminal DOO79_13265 IPR036653 CinA-like, C-terminal DOO79_13270 IPR004147 UbiB domain DOO79_13270 IPR011009 Protein kinase-like domain superfamily DOO79_13270 IPR010232 Probable protein kinase UbiB DOO79_13275 IPR006200 Transcription regulator LexA DOO79_13275 IPR036390 Winged helix DNA-binding domain superfamily DOO79_13275 IPR006199 LexA repressor, DNA-binding domain DOO79_13275 IPR006197 Peptidase S24, LexA-like DOO79_13275 IPR015927 Peptidase S24/S26A/S26B/S26C DOO79_13275 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_13275 IPR036286 LexA/Signal peptidase-like superfamily DOO79_13275 IPR039418 LexA-like DOO79_13280 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface DOO79_13280 IPR020584 DNA recombination/repair protein RecA, conserved site DOO79_13280 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain DOO79_13280 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_13280 IPR013765 DNA recombination and repair protein RecA DOO79_13280 IPR023400 DNA recombination and repair protein RecA, C-terminal DOO79_13280 IPR003593 AAA+ ATPase domain DOO79_13290 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_13290 IPR003783 Regulatory protein RecX DOO79_13295 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily DOO79_13295 IPR002318 Alanine-tRNA ligase, class IIc DOO79_13295 IPR009000 Translation protein, beta-barrel domain superfamily DOO79_13295 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily DOO79_13295 IPR003156 DHHA1 domain DOO79_13295 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria DOO79_13295 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal DOO79_13295 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain DOO79_13295 IPR012947 Threonyl/alanyl tRNA synthetase, SAD DOO79_13300 IPR003751 Translational regulator CsrA DOO79_13300 IPR036107 Carbon storage regulator superfamily DOO79_13315 IPR004090 Chemotaxis methyl-accepting receptor DOO79_13315 IPR013655 PAS fold-3 DOO79_13315 IPR035965 PAS domain superfamily DOO79_13315 IPR000700 PAS-associated, C-terminal DOO79_13315 IPR000014 PAS domain DOO79_13315 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DOO79_13315 IPR001610 PAC motif DOO79_13320 IPR011051 RmlC-like cupin domain superfamily DOO79_13320 IPR014710 RmlC-like jelly roll fold DOO79_13320 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain DOO79_13320 IPR003829 Pirin, N-terminal domain DOO79_13320 IPR012093 Pirin DOO79_13325 IPR000847 Transcription regulator HTH, LysR DOO79_13325 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_13325 IPR005119 LysR, substrate-binding DOO79_13325 IPR036390 Winged helix DNA-binding domain superfamily DOO79_13350 IPR029056 Ribokinase-like DOO79_13350 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase DOO79_13350 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase DOO79_13365 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_13365 IPR029060 PIN-like domain superfamily DOO79_13365 IPR002716 PIN domain DOO79_13365 IPR003714 PhoH-like protein DOO79_13370 IPR013766 Thioredoxin domain DOO79_13370 IPR036249 Thioredoxin-like superfamily DOO79_13370 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant DOO79_13385 IPR002220 DapA-like DOO79_13385 IPR020624 Schiff base-forming aldolase, conserved site DOO79_13385 IPR020625 Schiff base-forming aldolase, active site DOO79_13385 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA DOO79_13385 IPR013785 Aldolase-type TIM barrel DOO79_13395 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOO79_13395 IPR022569 Ferredoxin, C-terminal DOO79_13395 IPR000813 7Fe ferredoxin DOO79_13395 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOO79_13400 IPR042258 2-keto-3-deoxy-galactonokinase, N-terminal DOO79_13400 IPR042257 2-keto-3-deoxy-galactonokinase, C-terminal domain DOO79_13400 IPR007729 2-keto-3-deoxy-galactonokinase DOO79_13405 IPR011042 Six-bladed beta-propeller, TolB-like DOO79_13405 IPR013658 SMP-30/Gluconolactonase/LRE-like region DOO79_13405 IPR005511 Senescence marker protein-30 (SMP-30) DOO79_13410 IPR029065 Enolase C-terminal domain-like DOO79_13410 IPR029017 Enolase-like, N-terminal DOO79_13410 IPR036849 Enolase-like, C-terminal domain superfamily DOO79_13410 IPR034593 Mandelate racemase-like DOO79_13410 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site DOO79_13410 IPR023592 D-galactonate dehydratase DOO79_13410 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain DOO79_13410 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DOO79_13415 IPR000887 KDPG/KHG aldolase DOO79_13415 IPR013785 Aldolase-type TIM barrel DOO79_13425 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_13425 IPR005119 LysR, substrate-binding DOO79_13425 IPR000847 Transcription regulator HTH, LysR DOO79_13425 IPR036390 Winged helix DNA-binding domain superfamily DOO79_13425 IPR037405 HTH-type transcriptional regulator GbpR, PBP2 domain DOO79_13440 IPR001956 Carbohydrate-binding module 3 DOO79_13440 IPR005102 Carbohydrate binding X2 domain DOO79_13440 IPR015943 WD40/YVTN repeat-like-containing domain superfamily DOO79_13440 IPR014756 Immunoglobulin E-set DOO79_13440 IPR013783 Immunoglobulin-like fold DOO79_13440 IPR036966 Carbohydrate-binding module 3 superfamily DOO79_13440 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily DOO79_13455 IPR013780 Glycosyl hydrolase, all-beta DOO79_13455 IPR000322 Glycoside hydrolase family 31 DOO79_13455 IPR037524 PA14/GLEYA domain DOO79_13455 IPR011013 Galactose mutarotase-like domain superfamily DOO79_13455 IPR032513 Alpha-glucosidase, domain of unknown function DUF4968 DOO79_13455 IPR033403 Domain of unknown function DUF5110 DOO79_13455 IPR017853 Glycoside hydrolase superfamily DOO79_13465 IPR006000 Xylulokinase DOO79_13465 IPR018484 Carbohydrate kinase, FGGY, N-terminal DOO79_13465 IPR000577 Carbohydrate kinase, FGGY DOO79_13465 IPR018485 Carbohydrate kinase, FGGY, C-terminal DOO79_13465 IPR018483 Carbohydrate kinase, FGGY, conserved site DOO79_13470 IPR001998 Xylose isomerase DOO79_13470 IPR036237 Xylose isomerase-like superfamily DOO79_13470 IPR013452 Xylose isomerase, bacterial-type DOO79_13475 IPR020846 Major facilitator superfamily domain DOO79_13475 IPR005828 Major facilitator, sugar transporter-like DOO79_13475 IPR036259 MFS transporter superfamily DOO79_13475 IPR003663 Sugar/inositol transporter DOO79_13475 IPR005829 Sugar transporter, conserved site DOO79_13495 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain DOO79_13495 IPR006311 Twin-arginine translocation pathway, signal sequence DOO79_13500 IPR003801 GTP cyclohydrolase FolE2/MptA DOO79_13500 IPR022838 GTP cyclohydrolase FolE2 DOO79_13510 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain DOO79_13510 IPR025866 Polymerase A arginine-rich C-terminal domain DOO79_13510 IPR002646 Poly A polymerase, head domain DOO79_13510 IPR010206 Poly(A) polymerase I DOO79_13515 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK DOO79_13515 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily DOO79_13520 IPR003700 Ketopantoate hydroxymethyltransferase DOO79_13520 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DOO79_13520 IPR040442 Pyruvate kinase-like domain superfamily DOO79_13525 IPR003721 Pantoate-beta-alanine ligase DOO79_13525 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOO79_13525 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain DOO79_13530 IPR003190 Aspartate decarboxylase DOO79_13530 IPR009010 Aspartate decarboxylase-like domain superfamily DOO79_13535 IPR035476 Phosphoglucose isomerase, SIS domain 1 DOO79_13535 IPR018189 Phosphoglucose isomerase, conserved site DOO79_13535 IPR023096 Phosphoglucose isomerase, C-terminal DOO79_13535 IPR001672 Phosphoglucose isomerase (PGI) DOO79_13535 IPR035482 Phosphoglucose isomerase, SIS domain 2 DOO79_13560 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily DOO79_13560 IPR017853 Glycoside hydrolase superfamily DOO79_13560 IPR002772 Glycoside hydrolase family 3 C-terminal domain DOO79_13560 IPR001764 Glycoside hydrolase, family 3, N-terminal DOO79_13560 IPR026891 Fibronectin type III-like domain DOO79_13560 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily DOO79_13560 IPR013783 Immunoglobulin-like fold DOO79_13575 IPR000160 GGDEF domain DOO79_13575 IPR001294 Phytochrome DOO79_13575 IPR016132 Phytochrome chromophore attachment domain DOO79_13575 IPR013515 Phytochrome, central region DOO79_13575 IPR029787 Nucleotide cyclase DOO79_13575 IPR029016 GAF-like domain superfamily DOO79_13575 IPR003018 GAF domain DOO79_13575 IPR035919 EAL domain superfamily DOO79_13575 IPR001633 EAL domain DOO79_13585 IPR017853 Glycoside hydrolase superfamily DOO79_13585 IPR036601 CBM10 superfamily DOO79_13585 IPR002883 CBM10/dockerin domain DOO79_13585 IPR018087 Glycoside hydrolase, family 5, conserved site DOO79_13585 IPR009031 Carbohydrate binding module family 10 DOO79_13585 IPR001547 Glycoside hydrolase, family 5 DOO79_13590 IPR011006 CheY-like superfamily DOO79_13590 IPR001789 Signal transduction response regulator, receiver domain DOO79_13605 IPR011005 Dihydropteroate synthase-like DOO79_13605 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial DOO79_13605 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type DOO79_13610 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DOO79_13610 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily DOO79_13625 IPR005829 Sugar transporter, conserved site DOO79_13625 IPR036259 MFS transporter superfamily DOO79_13625 IPR011701 Major facilitator superfamily DOO79_13625 IPR020846 Major facilitator superfamily domain DOO79_13640 IPR016167 FAD-binding, type PCMH, subdomain 1 DOO79_13640 IPR036318 FAD-binding, type PCMH-like superfamily DOO79_13640 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase DOO79_13640 IPR006094 FAD linked oxidase, N-terminal DOO79_13640 IPR016166 FAD-binding domain, PCMH-type DOO79_13640 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily DOO79_13640 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal DOO79_13640 IPR016169 FAD-binding, type PCMH, subdomain 2 DOO79_13645 IPR005719 Dihydroorotate dehydrogenase, class 2 DOO79_13645 IPR013785 Aldolase-type TIM barrel DOO79_13645 IPR005720 Dihydroorotate dehydrogenase domain DOO79_13645 IPR001295 Dihydroorotate dehydrogenase, conserved site DOO79_13645 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 DOO79_13665 IPR023510 Methylmalonate-semialdehyde dehydrogenase, Gram-positive bacteria DOO79_13665 IPR010061 Methylmalonate-semialdehyde dehydrogenase DOO79_13665 IPR016162 Aldehyde dehydrogenase, N-terminal DOO79_13665 IPR016160 Aldehyde dehydrogenase, cysteine active site DOO79_13665 IPR015590 Aldehyde dehydrogenase domain DOO79_13665 IPR016163 Aldehyde dehydrogenase, C-terminal DOO79_13665 IPR016161 Aldehyde/histidinol dehydrogenase DOO79_13690 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_13690 IPR020575 Heat shock protein Hsp90, N-terminal DOO79_13690 IPR001404 Heat shock protein Hsp90 family DOO79_13690 IPR037196 HSP90, C-terminal domain DOO79_13690 IPR020568 Ribosomal protein S5 domain 2-type fold DOO79_13690 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_13690 IPR019805 Heat shock protein Hsp90, conserved site DOO79_13695 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DOO79_13695 IPR004398 RNA methyltransferase, RsmD DOO79_13695 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOO79_13700 IPR001980 Phosphopantetheine adenylyltransferase DOO79_13700 IPR004821 Cytidyltransferase-like domain DOO79_13700 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOO79_13715 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOO79_13715 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOO79_13720 IPR000101 Gamma-glutamyltranspeptidase DOO79_13720 IPR029055 Nucleophile aminohydrolases, N-terminal DOO79_13725 IPR014756 Immunoglobulin E-set DOO79_13725 IPR013783 Immunoglobulin-like fold DOO79_13725 IPR018221 Glycoside hydrolase family 9, His active site DOO79_13725 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites DOO79_13725 IPR004197 Cellulase, Ig-like domain DOO79_13725 IPR001701 Glycoside hydrolase family 9 DOO79_13725 IPR008928 Six-hairpin glycosidase superfamily DOO79_13725 IPR012341 Six-hairpin glycosidase-like superfamily DOO79_13730 IPR005765 Uracil phosphoribosyl transferase DOO79_13730 IPR029057 Phosphoribosyltransferase-like DOO79_13730 IPR034332 Uracil phosphoribosyltransferase, bacterial-type DOO79_13730 IPR000836 Phosphoribosyltransferase domain DOO79_13770 IPR042118 QueA, domain 1 DOO79_13770 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA DOO79_13770 IPR042119 QueA, domain 2 DOO79_13770 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily DOO79_13775 IPR004803 tRNA-guanine transglycosylase DOO79_13775 IPR002616 tRNA-guanine(15) transglycosylase-like DOO79_13775 IPR036511 Queuine tRNA-ribosyltransferase-like DOO79_13780 IPR003849 Preprotein translocase YajC DOO79_13785 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site DOO79_13785 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial DOO79_13785 IPR005791 Protein translocase subunit SecD DOO79_13785 IPR027398 SecD export protein N-terminal TM domain DOO79_13785 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DOO79_13790 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site DOO79_13790 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial DOO79_13790 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DOO79_13790 IPR005665 Protein-export membrane protein SecF, bacterial DOO79_13830 IPR036095 PTS system IIB component-like superfamily DOO79_13830 IPR013011 Phosphotransferase system, EIIB component, type 2 DOO79_13830 IPR003501 Phosphotransferase system, EIIB component, type 2/3 DOO79_13830 IPR013014 Phosphotransferase system, EIIC component, type 2 DOO79_13830 IPR006327 Phosphotransferase system, fructose IIC component DOO79_13830 IPR003353 Phosphotransferase system, fructose-specific IIB subunit DOO79_13835 IPR022463 Fructose 1-phosphate kinase DOO79_13835 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site DOO79_13835 IPR029056 Ribokinase-like DOO79_13835 IPR017583 Tagatose/fructose phosphokinase DOO79_13835 IPR011611 Carbohydrate kinase PfkB DOO79_13840 IPR008279 PEP-utilising enzyme, mobile domain DOO79_13840 IPR018274 PEP-utilising enzyme, active site DOO79_13840 IPR000032 Phosphocarrier protein HPr-like DOO79_13840 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DOO79_13840 IPR023151 PEP-utilising enzyme, conserved site DOO79_13840 IPR036637 Phosphohistidine domain superfamily DOO79_13840 IPR016152 Phosphotransferase/anion transporter DOO79_13840 IPR006318 Phosphotransferase system, enzyme I-like DOO79_13840 IPR002178 PTS EIIA type-2 domain DOO79_13840 IPR008731 Phosphotransferase system, enzyme I N-terminal DOO79_13840 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site DOO79_13840 IPR002114 Phosphotransferase system, HPr serine phosphorylation site DOO79_13840 IPR036618 PtsI, HPr-binding domain superfamily DOO79_13840 IPR040442 Pyruvate kinase-like domain superfamily DOO79_13840 IPR035895 HPr-like superfamily DOO79_13840 IPR000121 PEP-utilising enzyme, C-terminal DOO79_13845 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOO79_13845 IPR000843 LacI-type HTH domain DOO79_13845 IPR012310 DNA ligase, ATP-dependent, central DOO79_13845 IPR028082 Periplasmic binding protein-like I DOO79_13855 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DOO79_13855 IPR001036 Acriflavin resistance protein DOO79_13855 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 DOO79_13860 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DOO79_13860 IPR006143 RND efflux pump, membrane fusion protein DOO79_13870 IPR036291 NAD(P)-binding domain superfamily DOO79_13870 IPR007780 NAD-glutamate dehydrogenase, bacteria DOO79_13870 IPR028971 NAD-glutamate dehydrogenase DOO79_13905 IPR032816 SNARE associated Golgi protein DOO79_13910 IPR002938 FAD-binding domain DOO79_13910 IPR036188 FAD/NAD(P)-binding domain superfamily DOO79_13920 IPR029479 Nitroreductase DOO79_13920 IPR000415 Nitroreductase-like DOO79_13920 IPR033878 Nitroreductase NfsB-like DOO79_13925 IPR036291 NAD(P)-binding domain superfamily DOO79_13925 IPR002347 Short-chain dehydrogenase/reductase SDR DOO79_13925 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOO79_13960 IPR029058 Alpha/Beta hydrolase fold DOO79_13960 IPR000073 Alpha/beta hydrolase fold-1 DOO79_13960 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC DOO79_13960 IPR013216 Methyltransferase type 11 DOO79_13960 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOO79_14040 IPR025296 Domain of unknown function DUF4158 DOO79_14040 IPR002513 Tn3 transposase DDE domain DOO79_14055 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal DOO79_14055 IPR035903 HesB-like domain superfamily DOO79_14055 IPR034904 Fe-S cluster assembly domain superfamily DOO79_14055 IPR017726 Fe/S biogenesis protein NfuA DOO79_14060 IPR001533 Pterin 4 alpha carbinolamine dehydratase DOO79_14060 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily DOO79_14070 IPR023498 Zinc transporter ZupT DOO79_14070 IPR003689 Zinc/iron permease DOO79_14075 IPR021728 Protein of unknown function DUF3300 DOO79_14080 IPR006225 Pseudouridine synthase, RluC/RluD DOO79_14080 IPR036986 RNA-binding S4 domain superfamily DOO79_14080 IPR006145 Pseudouridine synthase, RsuA/RluA DOO79_14080 IPR020103 Pseudouridine synthase, catalytic domain superfamily DOO79_14080 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site DOO79_14080 IPR002942 RNA-binding S4 domain DOO79_14085 IPR012340 Nucleic acid-binding, OB-fold DOO79_14085 IPR004659 Ribonuclease E/G DOO79_14085 IPR003029 S1 domain DOO79_14085 IPR021968 Polyribonucleotide phosphorylase C-terminal DOO79_14085 IPR022967 RNA-binding domain, S1 DOO79_14085 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G DOO79_14085 IPR028878 Ribonuclease E DOO79_14090 IPR016032 Signal transduction response regulator, C-terminal effector DOO79_14090 IPR000792 Transcription regulator LuxR, C-terminal DOO79_14090 IPR011006 CheY-like superfamily DOO79_14090 IPR001789 Signal transduction response regulator, receiver domain DOO79_14105 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DOO79_14115 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal DOO79_14115 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase DOO79_14115 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation DOO79_14115 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily DOO79_14115 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal DOO79_14115 IPR017476 UDP-glucose/GDP-mannose dehydrogenase DOO79_14115 IPR036291 NAD(P)-binding domain superfamily DOO79_14115 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOO79_14125 IPR003542 Enterobactin synthetase-like, component D DOO79_14125 IPR041354 4'-phosphopantetheinyl transferase, N-terminal domain DOO79_14125 IPR037143 4'-phosphopantetheinyl transferase domain superfamily DOO79_14125 IPR008278 4'-phosphopantetheinyl transferase domain DOO79_14140 IPR020806 Polyketide synthase, phosphopantetheine-binding domain DOO79_14140 IPR020802 Polyketide synthase, thioesterase domain DOO79_14140 IPR010071 Amino acid adenylation domain DOO79_14140 IPR029058 Alpha/Beta hydrolase fold DOO79_14140 IPR001242 Condensation domain DOO79_14140 IPR001031 Thioesterase DOO79_14140 IPR036736 ACP-like superfamily DOO79_14140 IPR025110 AMP-binding enzyme, C-terminal domain DOO79_14140 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily DOO79_14140 IPR042099 AMP-dependent synthetase-like superfamily DOO79_14140 IPR020845 AMP-binding, conserved site DOO79_14140 IPR000873 AMP-dependent synthetase/ligase DOO79_14140 IPR009081 Phosphopantetheine binding ACP domain DOO79_14220 IPR000462 CDP-alcohol phosphatidyltransferase DOO79_14220 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase DOO79_14220 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial DOO79_14225 IPR035901 GIY-YIG endonuclease superfamily DOO79_14225 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 DOO79_14225 IPR010994 RuvA domain 2-like DOO79_14225 IPR001943 UVR domain DOO79_14225 IPR001162 UvrC family homology region DOO79_14225 IPR038476 UvrC homology region 2 superfamily DOO79_14225 IPR000305 GIY-YIG endonuclease DOO79_14225 IPR004791 UvrABC system, subunit C DOO79_14225 IPR036876 UVR domain superfamily DOO79_14235 IPR036196 Phosphotyrosine protein phosphatase I superfamily DOO79_14235 IPR023485 Phosphotyrosine protein phosphatase I DOO79_14235 IPR017867 Protein-tyrosine phosphatase, low molecular weight DOO79_14240 IPR003329 Acylneuraminate cytidylyltransferase DOO79_14240 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase DOO79_14240 IPR029044 Nucleotide-diphospho-sugar transferases DOO79_14245 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_14245 IPR003758 Tetraacyldisaccharide 4'-kinase DOO79_14250 IPR003439 ABC transporter-like DOO79_14250 IPR017871 ABC transporter, conserved site DOO79_14250 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_14250 IPR003593 AAA+ ATPase domain DOO79_14250 IPR039421 Type I protein exporter DOO79_14250 IPR036640 ABC transporter type 1, transmembrane domain superfamily DOO79_14250 IPR011527 ABC transporter type 1, transmembrane domain DOO79_14250 IPR011917 ABC transporter, lipid A export, MsbA DOO79_14260 IPR002898 MotA/TolQ/ExbB proton channel DOO79_14265 IPR001279 Metallo-beta-lactamase DOO79_14265 IPR004797 Competence protein ComEC/Rec2 DOO79_14265 IPR004477 ComEC/Rec2-related protein DOO79_14265 IPR035681 ComA-like, MBL domain DOO79_14265 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOO79_14275 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_14275 IPR003439 ABC transporter-like DOO79_14275 IPR015854 ABC transporter, lipoprotein release, LolD DOO79_14275 IPR011924 Lipoprotein releasing system, ATP-binding protein DOO79_14275 IPR003593 AAA+ ATPase domain DOO79_14280 IPR003838 ABC transporter permease protein domain DOO79_14280 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E DOO79_14280 IPR025857 MacB-like periplasmic core domain DOO79_14290 IPR036714 Flavinator of succinate dehydrogenase superfamily DOO79_14290 IPR005631 Flavinator of succinate dehydrogenase DOO79_14295 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOO79_14295 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOO79_14295 IPR012675 Beta-grasp domain superfamily DOO79_14295 IPR009051 Alpha-helical ferredoxin DOO79_14295 IPR036010 2Fe-2S ferredoxin-like superfamily DOO79_14295 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein DOO79_14295 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain DOO79_14295 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site DOO79_14295 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal DOO79_14305 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site DOO79_14305 IPR036188 FAD/NAD(P)-binding domain superfamily DOO79_14305 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal DOO79_14305 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit DOO79_14305 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain DOO79_14305 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily DOO79_14305 IPR011281 Succinate dehydrogenase, flavoprotein subunit DOO79_14305 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily DOO79_14310 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit DOO79_14310 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit DOO79_14310 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor DOO79_14315 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit DOO79_14315 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site DOO79_14315 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit DOO79_14315 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit DOO79_14325 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal DOO79_14325 IPR017703 YgfZ/GcvT conserved site DOO79_14325 IPR023758 tRNA-modifying protein YgfZ DOO79_14330 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_14330 IPR003593 AAA+ ATPase domain DOO79_14330 IPR003439 ABC transporter-like DOO79_14330 IPR017871 ABC transporter, conserved site DOO79_14330 IPR008995 Molybdate/tungstate binding, C-terminal DOO79_14330 IPR040582 MalK, OB fold domain DOO79_14330 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC DOO79_14335 IPR001282 Glucose-6-phosphate dehydrogenase DOO79_14335 IPR019796 Glucose-6-phosphate dehydrogenase, active site DOO79_14335 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding DOO79_14335 IPR036291 NAD(P)-binding domain superfamily DOO79_14335 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal DOO79_14340 IPR003836 Glucokinase DOO79_14345 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase DOO79_14345 IPR039104 6-Phosphogluconolactonase DOO79_14345 IPR037171 NagB/RpiA transferase-like DOO79_14345 IPR005900 6-phosphogluconolactonase, DevB-type DOO79_14350 IPR037237 IlvD/EDD, N-terminal domain DOO79_14350 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site DOO79_14350 IPR042096 Dihydroxy-acid dehydratase, C-terminal DOO79_14350 IPR004786 6-phosphogluconate dehydratase DOO79_14350 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase DOO79_14355 IPR031338 KDPG/KHG aldolase, active site 2 DOO79_14355 IPR013785 Aldolase-type TIM barrel DOO79_14355 IPR000887 KDPG/KHG aldolase DOO79_14355 IPR031337 KDPG/KHG aldolase, active site 1 DOO79_14365 IPR001036 Acriflavin resistance protein DOO79_14365 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DOO79_14365 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 DOO79_14370 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DOO79_14370 IPR001036 Acriflavin resistance protein DOO79_14375 IPR006143 RND efflux pump, membrane fusion protein DOO79_14375 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DOO79_14385 IPR009056 Cytochrome c-like domain DOO79_14385 IPR036909 Cytochrome c-like domain superfamily DOO79_14430 IPR001789 Signal transduction response regulator, receiver domain DOO79_14430 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_14430 IPR029151 Periplasmic sensor-like domain superfamily DOO79_14430 IPR035965 PAS domain superfamily DOO79_14430 IPR011006 CheY-like superfamily DOO79_14430 IPR015387 LuxQ, periplasmic DOO79_14430 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_14430 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOO79_14430 IPR005467 Histidine kinase domain DOO79_14430 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_14430 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_14435 IPR041692 HHH domain 9 DOO79_14435 IPR022967 RNA-binding domain, S1 DOO79_14435 IPR003029 S1 domain DOO79_14435 IPR023323 Tex-like domain superfamily DOO79_14435 IPR012340 Nucleic acid-binding, OB-fold DOO79_14435 IPR037027 YqgF/RNase H-like domain superfamily DOO79_14435 IPR032639 Tex protein, YqgF-like domain DOO79_14435 IPR023319 Tex-like protein, HTH domain superfamily DOO79_14435 IPR018974 Tex-like protein, N-terminal DOO79_14435 IPR012337 Ribonuclease H-like superfamily DOO79_14435 IPR006641 YqgF/RNase H-like domain DOO79_14435 IPR010994 RuvA domain 2-like DOO79_14445 IPR006076 FAD dependent oxidoreductase DOO79_14445 IPR036188 FAD/NAD(P)-binding domain superfamily DOO79_14445 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily DOO79_14445 IPR017941 Rieske [2Fe-2S] iron-sulphur domain DOO79_14445 IPR005805 Rieske iron-sulphur protein, C-terminal DOO79_14445 IPR038010 YhfW, C-terminal Rieske domain DOO79_14460 IPR029058 Alpha/Beta hydrolase fold DOO79_14460 IPR000073 Alpha/beta hydrolase fold-1 DOO79_14460 IPR010125 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit DOO79_14470 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase DOO79_14470 IPR000462 CDP-alcohol phosphatidyltransferase DOO79_14475 IPR002347 Short-chain dehydrogenase/reductase SDR DOO79_14475 IPR011294 3-hydroxybutyrate dehydrogenase DOO79_14475 IPR036291 NAD(P)-binding domain superfamily DOO79_14475 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOO79_14490 IPR005177 Bifunctional kinase-pyrophosphorylase DOO79_14490 IPR026530 Phosphoenolpyruvate synthase regulatory protein DOO79_14495 IPR023151 PEP-utilising enzyme, conserved site DOO79_14495 IPR013815 ATP-grasp fold, subdomain 1 DOO79_14495 IPR008279 PEP-utilising enzyme, mobile domain DOO79_14495 IPR006319 Phosphoenolpyruvate synthase DOO79_14495 IPR018274 PEP-utilising enzyme, active site DOO79_14495 IPR000121 PEP-utilising enzyme, C-terminal DOO79_14495 IPR036637 Phosphohistidine domain superfamily DOO79_14495 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding DOO79_14495 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DOO79_14495 IPR040442 Pyruvate kinase-like domain superfamily DOO79_14500 IPR008910 Conserved TM helix DOO79_14500 IPR023408 Mechanosensitive ion channel MscS domain superfamily DOO79_14500 IPR006686 Mechanosensitive ion channel MscS, conserved site DOO79_14500 IPR011066 Mechanosensitive ion channel MscS, C-terminal DOO79_14500 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 DOO79_14500 IPR006685 Mechanosensitive ion channel MscS DOO79_14500 IPR010920 LSM domain superfamily DOO79_14505 IPR005042 TAL effector repeat DOO79_14520 IPR007159 SpoVT-AbrB domain DOO79_14520 IPR037914 SpoVT-AbrB domain superfamily DOO79_14585 IPR011978 Uncharacterised protein family UPF0149 DOO79_14585 IPR036255 YgfB-like superfamily DOO79_14585 IPR004027 SEC-C motif DOO79_14605 IPR006120 Resolvase, HTH domain DOO79_14605 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily DOO79_14605 IPR006119 Resolvase, N-terminal catalytic domain DOO79_14605 IPR006118 Recombinase, conserved site DOO79_14605 IPR009057 Homeobox-like domain superfamily DOO79_14635 IPR022894 Oligoribonuclease DOO79_14635 IPR013520 Exonuclease, RNase T/DNA polymerase III DOO79_14635 IPR012337 Ribonuclease H-like superfamily DOO79_14635 IPR036397 Ribonuclease H superfamily DOO79_14640 IPR002125 Cytidine and deoxycytidylate deaminase domain DOO79_14640 IPR016192 APOBEC/CMP deaminase, zinc-binding DOO79_14640 IPR028883 tRNA-specific adenosine deaminase DOO79_14640 IPR016193 Cytidine deaminase-like DOO79_14645 IPR036390 Winged helix DNA-binding domain superfamily DOO79_14645 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_14645 IPR022689 Iron dependent repressor DOO79_14645 IPR001367 Iron dependent repressor, metal binding and dimerisation domain DOO79_14645 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily DOO79_14645 IPR022687 DTXR-type HTH domain DOO79_14650 IPR001046 NRAMP family DOO79_14655 IPR000073 Alpha/beta hydrolase fold-1 DOO79_14655 IPR029058 Alpha/Beta hydrolase fold DOO79_14655 IPR000639 Epoxide hydrolase-like DOO79_14670 IPR036259 MFS transporter superfamily DOO79_14670 IPR020846 Major facilitator superfamily domain DOO79_14670 IPR010290 Transmembrane secretion effector DOO79_14695 IPR036380 Isochorismatase-like superfamily DOO79_14695 IPR000868 Isochorismatase-like DOO79_14710 IPR000792 Transcription regulator LuxR, C-terminal DOO79_14710 IPR011006 CheY-like superfamily DOO79_14710 IPR016032 Signal transduction response regulator, C-terminal effector DOO79_14710 IPR001789 Signal transduction response regulator, receiver domain DOO79_14730 IPR000847 Transcription regulator HTH, LysR DOO79_14730 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_14730 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain DOO79_14730 IPR005119 LysR, substrate-binding DOO79_14730 IPR036390 Winged helix DNA-binding domain superfamily DOO79_14735 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal DOO79_14735 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit DOO79_14735 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 DOO79_14735 IPR002128 NADH:ubiquinone/plastoquinone oxidoreductase, chloroplast chain 5, C-terminal DOO79_14735 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup DOO79_14740 IPR018752 Uncharacterised protein family UPF0753 DOO79_14745 IPR001674 GMP synthase, C-terminal DOO79_14745 IPR017926 Glutamine amidotransferase DOO79_14745 IPR029062 Class I glutamine amidotransferase-like DOO79_14745 IPR022310 NAD/GMP synthase DOO79_14745 IPR025777 GMP synthetase ATP pyrophosphatase domain DOO79_14745 IPR022955 GMP synthase DOO79_14745 IPR004739 GMP synthase, glutamine amidotransferase DOO79_14745 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOO79_14750 IPR005990 Inosine-5'-monophosphate dehydrogenase DOO79_14750 IPR015875 IMP dehydrogenase / GMP reductase, conserved site DOO79_14750 IPR001093 IMP dehydrogenase/GMP reductase DOO79_14750 IPR013785 Aldolase-type TIM barrel DOO79_14750 IPR000644 CBS domain DOO79_14755 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DOO79_14755 IPR036291 NAD(P)-binding domain superfamily DOO79_14755 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase DOO79_14755 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site DOO79_14755 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DOO79_14765 IPR036291 NAD(P)-binding domain superfamily DOO79_14765 IPR006153 Cation/H+ exchanger DOO79_14765 IPR004771 K+/H+ exchanger DOO79_14765 IPR003148 Regulator of K+ conductance, N-terminal DOO79_14765 IPR038770 Sodium/solute symporter superfamily DOO79_14775 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type DOO79_14775 IPR005835 Nucleotidyl transferase domain DOO79_14775 IPR029044 Nucleotide-diphospho-sugar transferases DOO79_14780 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain DOO79_14780 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOO79_14780 IPR036291 NAD(P)-binding domain superfamily DOO79_14785 IPR000715 Glycosyl transferase, family 4 DOO79_14790 IPR019734 Tetratricopeptide repeat DOO79_14790 IPR011990 Tetratricopeptide-like helical domain superfamily DOO79_14790 IPR013026 Tetratricopeptide repeat-containing domain DOO79_14790 IPR041166 LapB, rubredoxin metal binding domain DOO79_14790 IPR030865 Lipopolysaccharide assembly protein B DOO79_14800 IPR020816 Histone-like DNA-binding protein, conserved site DOO79_14800 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily DOO79_14800 IPR005685 Integration host factor, beta subunit DOO79_14800 IPR000119 Histone-like DNA-binding protein DOO79_14805 IPR003029 S1 domain DOO79_14805 IPR022967 RNA-binding domain, S1 DOO79_14805 IPR012340 Nucleic acid-binding, OB-fold DOO79_14805 IPR000110 Ribosomal protein S1 DOO79_14810 IPR003136 Cytidylate kinase DOO79_14810 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_14810 IPR011994 Cytidylate kinase domain DOO79_14815 IPR035977 Ribosomal protein L36 superfamily DOO79_14815 IPR000473 Ribosomal protein L36 DOO79_14830 IPR017754 Agmatine deiminase DOO79_14830 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type DOO79_14835 IPR003010 Carbon-nitrogen hydrolase DOO79_14835 IPR036526 Carbon-nitrogen hydrolase superfamily DOO79_14835 IPR001110 Uncharacterised protein family UPF0012, conserved site DOO79_14840 IPR016181 Acyl-CoA N-acyltransferase DOO79_14840 IPR000182 GNAT domain DOO79_14860 IPR035906 MetI-like superfamily DOO79_14860 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOO79_14865 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOO79_14865 IPR035906 MetI-like superfamily DOO79_14885 IPR028082 Periplasmic binding protein-like I DOO79_14885 IPR000843 LacI-type HTH domain DOO79_14885 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOO79_14895 IPR005545 YCII-related DOO79_14895 IPR011008 Dimeric alpha-beta barrel DOO79_14900 IPR003768 Segregation and condensation protein A DOO79_14905 IPR036390 Winged helix DNA-binding domain superfamily DOO79_14905 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_14905 IPR005234 Chromosome segregation/condensation protein ScpB DOO79_14910 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site DOO79_14910 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F DOO79_14910 IPR002942 RNA-binding S4 domain DOO79_14910 IPR020103 Pseudouridine synthase, catalytic domain superfamily DOO79_14910 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain DOO79_14910 IPR006145 Pseudouridine synthase, RsuA/RluA DOO79_14910 IPR036986 RNA-binding S4 domain superfamily DOO79_14925 IPR036526 Carbon-nitrogen hydrolase superfamily DOO79_14925 IPR003010 Carbon-nitrogen hydrolase DOO79_14925 IPR001110 Uncharacterised protein family UPF0012, conserved site DOO79_14930 IPR015424 Pyridoxal phosphate-dependent transferase DOO79_14930 IPR004839 Aminotransferase, class I/classII DOO79_14930 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOO79_14930 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOO79_14935 IPR017871 ABC transporter, conserved site DOO79_14935 IPR003439 ABC transporter-like DOO79_14935 IPR003593 AAA+ ATPase domain DOO79_14935 IPR005895 ABC transporter, haem export, CcmA DOO79_14935 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_14940 IPR003544 Cytochrome c-type biogenesis protein CcmB DOO79_14940 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria DOO79_14945 IPR002541 Cytochrome c assembly protein DOO79_14945 IPR003557 Cytochrome c-type biogenesis protein CcmC DOO79_14955 IPR036127 CcmE-like superfamily DOO79_14955 IPR004329 CcmE/CycJ protein DOO79_14960 IPR003567 Cytochrome c-type biogenesis protein DOO79_14960 IPR002541 Cytochrome c assembly protein DOO79_14960 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal DOO79_14960 IPR003568 Cytochrome c-type biogenesis protein CcmF DOO79_14965 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE DOO79_14965 IPR013740 Redoxin DOO79_14965 IPR017937 Thioredoxin, conserved site DOO79_14965 IPR013766 Thioredoxin domain DOO79_14965 IPR036249 Thioredoxin-like superfamily DOO79_14970 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily DOO79_14970 IPR005616 CcmH/CycL/Ccl2/NrfF family DOO79_14980 IPR008220 Homoserine/serine acetyltransferase MetX-like DOO79_14980 IPR000073 Alpha/beta hydrolase fold-1 DOO79_14980 IPR029058 Alpha/Beta hydrolase fold DOO79_14985 IPR002059 Cold-shock protein, DNA-binding DOO79_14985 IPR019844 Cold-shock (CSD) domain DOO79_14985 IPR012340 Nucleic acid-binding, OB-fold DOO79_14985 IPR011129 Cold shock domain DOO79_14985 IPR012156 Cold shock, CspA DOO79_14990 IPR003593 AAA+ ATPase domain DOO79_14990 IPR011527 ABC transporter type 1, transmembrane domain DOO79_14990 IPR017871 ABC transporter, conserved site DOO79_14990 IPR003439 ABC transporter-like DOO79_14990 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC DOO79_14990 IPR036640 ABC transporter type 1, transmembrane domain superfamily DOO79_14990 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_14995 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD DOO79_14995 IPR003593 AAA+ ATPase domain DOO79_14995 IPR011527 ABC transporter type 1, transmembrane domain DOO79_14995 IPR036640 ABC transporter type 1, transmembrane domain superfamily DOO79_14995 IPR017871 ABC transporter, conserved site DOO79_14995 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_14995 IPR003439 ABC transporter-like DOO79_14995 IPR039421 Type I protein exporter DOO79_15000 IPR002585 Cytochrome ubiquinol oxidase subunit 1 DOO79_15005 IPR003317 Cytochrome ubiquinol oxidase subunit 2 DOO79_15015 IPR000477 Reverse transcriptase domain DOO79_15030 IPR008979 Galactose-binding-like domain superfamily DOO79_15030 IPR005674 CocE/Serine esterase DOO79_15030 IPR029058 Alpha/Beta hydrolase fold DOO79_15030 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain DOO79_15030 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal DOO79_15040 IPR016163 Aldehyde dehydrogenase, C-terminal DOO79_15040 IPR016162 Aldehyde dehydrogenase, N-terminal DOO79_15040 IPR015590 Aldehyde dehydrogenase domain DOO79_15040 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site DOO79_15040 IPR000965 GPR domain DOO79_15040 IPR016161 Aldehyde/histidinol dehydrogenase DOO79_15040 IPR012134 Glutamate-5-semialdehyde dehydrogenase DOO79_15045 IPR015947 PUA-like superfamily DOO79_15045 IPR002478 PUA domain DOO79_15045 IPR019797 Glutamate 5-kinase, conserved site DOO79_15045 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase DOO79_15045 IPR036974 PUA domain superfamily DOO79_15045 IPR011529 Glutamate 5-kinase DOO79_15045 IPR041739 Glutamate-5-kinase domain DOO79_15045 IPR001048 Aspartate/glutamate/uridylate kinase DOO79_15045 IPR036393 Acetylglutamate kinase-like superfamily DOO79_15045 IPR001057 Glutamate/acetylglutamate kinase DOO79_15055 IPR000362 Fumarate lyase family DOO79_15055 IPR008948 L-Aspartase-like DOO79_15055 IPR020557 Fumarate lyase, conserved site DOO79_15055 IPR024083 Fumarase/histidase, N-terminal DOO79_15055 IPR022761 Fumarate lyase, N-terminal DOO79_15055 IPR009049 Argininosuccinate lyase DOO79_15060 IPR000534 Semialdehyde dehydrogenase, NAD-binding DOO79_15060 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site DOO79_15060 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 DOO79_15060 IPR036291 NAD(P)-binding domain superfamily DOO79_15070 IPR006855 Vertebrate-like NAGS Gcn5-related N-acetyltransferase (GNAT) domain DOO79_15070 IPR001048 Aspartate/glutamate/uridylate kinase DOO79_15070 IPR041734 N-Acetyl-L-glutamate kinase, fungal-type DOO79_15070 IPR011242 Acetylglutamate kinase ArgB, GNAT domain-containing DOO79_15070 IPR016181 Acyl-CoA N-acyltransferase DOO79_15070 IPR004662 Acetylglutamate kinase family DOO79_15070 IPR036393 Acetylglutamate kinase-like superfamily DOO79_15075 IPR036264 Bacterial exopeptidase dimerisation domain DOO79_15075 IPR011650 Peptidase M20, dimerisation domain DOO79_15075 IPR002933 Peptidase M20 DOO79_15075 IPR010169 Acetylornithine deacetylase ArgE DOO79_15085 IPR001518 Argininosuccinate synthase DOO79_15085 IPR018223 Argininosuccinate synthase, conserved site DOO79_15085 IPR023434 Argininosuccinate synthase, type 1 subfamily DOO79_15085 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOO79_15085 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body DOO79_15090 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding DOO79_15090 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain DOO79_15090 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily DOO79_15090 IPR006130 Aspartate/ornithine carbamoyltransferase DOO79_15100 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding DOO79_15100 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR DOO79_15100 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOO79_15100 IPR015803 Cysteine-tRNA ligase DOO79_15100 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase DOO79_15100 IPR032678 tRNA synthetases class I, catalytic domain DOO79_15105 IPR023939 Cysteine desulfuration protein SufE DOO79_15105 IPR003808 Fe-S metabolism associated domain, SufE-like DOO79_15115 IPR012784 RNA polymerase-binding transcription factor DksA DOO79_15115 IPR037187 DksA, N-terminal domain superfamily DOO79_15115 IPR020458 Zinc finger, DksA/TraR C4-type conserved site DOO79_15115 IPR000962 Zinc finger, DksA/TraR C4-type DOO79_15120 IPR002696 Putative membrane protein insertion efficiency factor DOO79_15125 IPR032466 Metal-dependent hydrolase DOO79_15125 IPR011059 Metal-dependent hydrolase, composite domain superfamily DOO79_15125 IPR002195 Dihydroorotase, conserved site DOO79_15125 IPR004722 Dihydroorotase DOO79_15125 IPR006680 Amidohydrolase-related DOO79_15150 IPR010628 Ethanolamine ammonia lyase large subunit DOO79_15150 IPR013785 Aldolase-type TIM barrel DOO79_15155 IPR042255 Ethanolamine ammonia-lyase light chain, N-terminal DOO79_15155 IPR042251 Ethanolamine ammonia-lyase light chain, C-terminal DOO79_15155 IPR009246 Ethanolamine ammonia-lyase light chain DOO79_15165 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOO79_15165 IPR001279 Metallo-beta-lactamase DOO79_15210 IPR011050 Pectin lyase fold/virulence factor DOO79_15210 IPR000743 Glycoside hydrolase, family 28 DOO79_15210 IPR012334 Pectin lyase fold DOO79_15220 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DOO79_15220 IPR036412 HAD-like superfamily DOO79_15220 IPR023214 HAD superfamily DOO79_15220 IPR006439 HAD hydrolase, subfamily IA DOO79_15220 IPR041492 Haloacid dehalogenase-like hydrolase DOO79_15220 IPR037512 Phosphoglycolate phosphatase, prokaryotic DOO79_15220 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic DOO79_15225 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOO79_15225 IPR010233 Ubiquinone biosynthesis O-methyltransferase DOO79_15230 IPR006680 Amidohydrolase-related DOO79_15230 IPR023512 Deaminase MtaD/DadD DOO79_15230 IPR011059 Metal-dependent hydrolase, composite domain superfamily DOO79_15230 IPR032466 Metal-dependent hydrolase DOO79_15240 IPR011768 Translation elongation factor P DOO79_15240 IPR013852 Translation elongation factor P/YeiP, conserved site DOO79_15240 IPR008991 Translation protein SH3-like domain superfamily DOO79_15240 IPR013185 Translation elongation factor, KOW-like DOO79_15240 IPR020599 Translation elongation factor P/YeiP DOO79_15240 IPR012340 Nucleic acid-binding, OB-fold DOO79_15240 IPR001059 Translation elongation factor P/YeiP, central DOO79_15240 IPR014722 Ribosomal protein L2, domain 2 DOO79_15240 IPR015365 Elongation factor P, C-terminal DOO79_15245 IPR013785 Aldolase-type TIM barrel DOO79_15245 IPR022462 Lysine-2,3-aminomutase-like DOO79_15245 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase DOO79_15245 IPR007197 Radical SAM DOO79_15250 IPR001633 EAL domain DOO79_15250 IPR035919 EAL domain superfamily DOO79_15250 IPR000160 GGDEF domain DOO79_15250 IPR005330 MHYT domain DOO79_15250 IPR035965 PAS domain superfamily DOO79_15250 IPR029787 Nucleotide cyclase DOO79_15250 IPR000014 PAS domain DOO79_15260 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DOO79_15260 IPR001537 tRNA/rRNA methyltransferase, SpoU type DOO79_15260 IPR004384 RNA methyltransferase TrmJ/LasT DOO79_15260 IPR029028 Alpha/beta knot methyltransferases DOO79_15265 IPR020583 Inositol monophosphatase, metal-binding site DOO79_15265 IPR000760 Inositol monophosphatase-like DOO79_15265 IPR020550 Inositol monophosphatase, conserved site DOO79_15265 IPR022337 Inositol monophosphatase, SuhB DOO79_15265 IPR033942 Inositol monophosphatase DOO79_15270 IPR019832 Manganese/iron superoxide dismutase, C-terminal DOO79_15270 IPR019833 Manganese/iron superoxide dismutase, binding site DOO79_15270 IPR019831 Manganese/iron superoxide dismutase, N-terminal DOO79_15270 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily DOO79_15270 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily DOO79_15270 IPR001189 Manganese/iron superoxide dismutase DOO79_15275 IPR000026 Guanine-specific ribonuclease N1/T1/U2 DOO79_15275 IPR016191 Ribonuclease/ribotoxin DOO79_15295 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain DOO79_15295 IPR014014 RNA helicase, DEAD-box type, Q motif DOO79_15295 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily DOO79_15295 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOO79_15295 IPR028619 ATP-dependent RNA helicase DbpA DOO79_15295 IPR011545 DEAD/DEAH box helicase domain DOO79_15295 IPR001650 Helicase, C-terminal DOO79_15295 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DOO79_15295 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_15300 IPR000836 Phosphoribosyltransferase domain DOO79_15300 IPR005764 Adenine phosphoribosyl transferase DOO79_15300 IPR029057 Phosphoribosyltransferase-like DOO79_15305 IPR003846 Protein adenylyltransferase SelO DOO79_15315 IPR034333 Glutathione S-transferases, class Zeta , N-terminal DOO79_15315 IPR034330 Glutathione S-transferases, class Zeta , C-terminal DOO79_15315 IPR036249 Thioredoxin-like superfamily DOO79_15315 IPR010987 Glutathione S-transferase, C-terminal-like DOO79_15315 IPR004046 Glutathione S-transferase, C-terminal DOO79_15315 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DOO79_15315 IPR040079 Glutathione Transferase family DOO79_15315 IPR005955 Glutathione S-transferases, class Zeta DOO79_15315 IPR004045 Glutathione S-transferase, N-terminal DOO79_15320 IPR012340 Nucleic acid-binding, OB-fold DOO79_15320 IPR011129 Cold shock domain DOO79_15320 IPR019844 Cold-shock (CSD) domain DOO79_15320 IPR002059 Cold-shock protein, DNA-binding DOO79_15320 IPR012156 Cold shock, CspA DOO79_15325 IPR038590 YaeQ superfamily DOO79_15325 IPR009822 YaeQ DOO79_15325 IPR011335 Restriction endonuclease type II-like DOO79_15330 IPR023166 HI0933-like insert domain superfamily DOO79_15330 IPR036188 FAD/NAD(P)-binding domain superfamily DOO79_15330 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like DOO79_15375 IPR000924 Glutamyl/glutaminyl-tRNA synthetase DOO79_15375 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain DOO79_15375 IPR022380 Glutamyl-Q tRNA(Asp) synthetase DOO79_15375 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOO79_15380 IPR002347 Short-chain dehydrogenase/reductase SDR DOO79_15380 IPR036291 NAD(P)-binding domain superfamily DOO79_15380 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOO79_15380 IPR011283 Acetoacetyl-CoA reductase DOO79_15385 IPR012909 PHA accumulation regulator DNA-binding, N-terminal DOO79_15385 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR DOO79_15385 IPR007897 PHB accumulation regulatory DOO79_15405 IPR042121 MutL, C-terminal domain, regulatory subdomain DOO79_15405 IPR042120 MutL, C-terminal domain, dimerisation subdomain DOO79_15405 IPR014790 MutL, C-terminal, dimerisation DOO79_15405 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms DOO79_15405 IPR020667 DNA mismatch repair protein, MutL DOO79_15405 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_15405 IPR037198 MutL, C-terminal domain superfamily DOO79_15405 IPR013507 DNA mismatch repair protein, S5 domain 2-like DOO79_15405 IPR020568 Ribosomal protein S5 domain 2-type fold DOO79_15405 IPR002099 DNA mismatch repair protein family, N-terminal DOO79_15405 IPR014762 DNA mismatch repair, conserved site DOO79_15405 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOO79_15410 IPR006311 Twin-arginine translocation pathway, signal sequence DOO79_15410 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain DOO79_15410 IPR021731 AMIN domain DOO79_15415 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_15415 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE DOO79_15420 IPR004443 YjeF N-terminal domain DOO79_15420 IPR036652 YjeF N-terminal domain superfamily DOO79_15420 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase DOO79_15420 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr DOO79_15420 IPR017953 Carbohydrate kinase, predicted, conserved site DOO79_15420 IPR029056 Ribokinase-like DOO79_15425 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOO79_15425 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOO79_15425 IPR013542 Domain of unknown function DUF1730 DOO79_15425 IPR004453 Epoxyqueuosine reductase QueG DOO79_15430 IPR020579 Exonuclease VII, large subunit, C-terminal DOO79_15430 IPR025824 OB-fold nucleic acid binding domain DOO79_15430 IPR003753 Exonuclease VII, large subunit DOO79_15445 IPR005532 Sulfatase-modifying factor enzyme DOO79_15445 IPR042095 Sulfatase-modifying factor enzyme superfamily DOO79_15445 IPR016187 C-type lectin fold DOO79_15455 IPR006292 Ribonuclease D DOO79_15455 IPR002121 HRDC domain DOO79_15455 IPR010997 HRDC-like superfamily DOO79_15455 IPR002562 3'-5' exonuclease domain DOO79_15455 IPR012337 Ribonuclease H-like superfamily DOO79_15455 IPR036397 Ribonuclease H superfamily DOO79_15485 IPR036061 CheW-like domain superfamily DOO79_15485 IPR002545 CheW-like domain DOO79_15485 IPR039315 Chemotaxis protein CheW DOO79_15490 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DOO79_15490 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DOO79_15490 IPR029151 Periplasmic sensor-like domain superfamily DOO79_15490 IPR033479 Double Cache domain 1 DOO79_15490 IPR003660 HAMP domain DOO79_15495 IPR011034 Formyl transferase-like, C-terminal domain superfamily DOO79_15495 IPR003180 Methylpurine-DNA glycosylase DOO79_15495 IPR036995 Methylpurine-DNA glycosylase superfamily DOO79_15500 IPR013701 DEAD/H associated DOO79_15500 IPR003593 AAA+ ATPase domain DOO79_15500 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_15500 IPR001650 Helicase, C-terminal DOO79_15500 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOO79_15500 IPR011545 DEAD/DEAH box helicase domain DOO79_15520 IPR036760 SspB-like superfamily DOO79_15520 IPR007481 Stringent starvation protein B DOO79_15525 IPR034341 Stringent starvation protein A, N-terminal DOO79_15525 IPR036249 Thioredoxin-like superfamily DOO79_15525 IPR004045 Glutathione S-transferase, N-terminal DOO79_15525 IPR004046 Glutathione S-transferase, C-terminal DOO79_15525 IPR040079 Glutathione Transferase family DOO79_15525 IPR010987 Glutathione S-transferase, C-terminal-like DOO79_15525 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DOO79_15530 IPR036909 Cytochrome c-like domain superfamily DOO79_15530 IPR002326 Cytochrome c1 DOO79_15530 IPR009056 Cytochrome c-like domain DOO79_15535 IPR016174 Di-haem cytochrome, transmembrane DOO79_15535 IPR030689 Cytochrome b DOO79_15535 IPR027387 Cytochrome b/b6-like domain superfamily DOO79_15535 IPR005797 Cytochrome b/b6, N-terminal DOO79_15535 IPR036150 Cytochrome b/b6, C-terminal domain superfamily DOO79_15535 IPR005798 Cytochrome b/b6, C-terminal DOO79_15550 IPR008258 Transglycosylase SLT domain 1 DOO79_15550 IPR000189 Prokaryotic transglycosylase, active site DOO79_15550 IPR023346 Lysozyme-like domain superfamily DOO79_15565 IPR020612 Methylthiotransferase, conserved site DOO79_15565 IPR002792 TRAM domain DOO79_15565 IPR023404 Radical SAM, alpha/beta horseshoe DOO79_15565 IPR006638 Elp3/MiaB/NifB DOO79_15565 IPR005839 Methylthiotransferase DOO79_15565 IPR013848 Methylthiotransferase, N-terminal DOO79_15565 IPR038135 Methylthiotransferase, N-terminal domain superfamily DOO79_15565 IPR007197 Radical SAM DOO79_15565 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB DOO79_15570 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_15570 IPR003714 PhoH-like protein DOO79_15580 IPR020549 Endoribonuclease YbeY, conserved site DOO79_15580 IPR023091 Metalloprotease catalytic domain superfamily, predicted DOO79_15580 IPR002036 Endoribonuclease YbeY DOO79_15590 IPR000644 CBS domain DOO79_15590 IPR036318 FAD-binding, type PCMH-like superfamily DOO79_15590 IPR005170 Transporter-associated domain DOO79_15590 IPR016169 FAD-binding, type PCMH, subdomain 2 DOO79_15605 IPR016162 Aldehyde dehydrogenase, N-terminal DOO79_15605 IPR016163 Aldehyde dehydrogenase, C-terminal DOO79_15605 IPR015590 Aldehyde dehydrogenase domain DOO79_15605 IPR016161 Aldehyde/histidinol dehydrogenase DOO79_15610 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOO79_15610 IPR035906 MetI-like superfamily DOO79_15615 IPR035906 MetI-like superfamily DOO79_15615 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOO79_15620 IPR003439 ABC transporter-like DOO79_15620 IPR017871 ABC transporter, conserved site DOO79_15620 IPR003593 AAA+ ATPase domain DOO79_15620 IPR008995 Molybdate/tungstate binding, C-terminal DOO79_15620 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_15620 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit DOO79_15620 IPR013611 Transport-associated OB, type 2 DOO79_15625 IPR003423 Outer membrane efflux protein DOO79_15625 IPR010131 RND efflux system, outer membrane lipoprotein, NodT DOO79_15630 IPR004638 Drug resistance transporter EmrB-like DOO79_15630 IPR020846 Major facilitator superfamily domain DOO79_15630 IPR036259 MFS transporter superfamily DOO79_15630 IPR011701 Major facilitator superfamily DOO79_15635 IPR039562 Membrane fusion protein, biotin-lipoyl like domain DOO79_15640 IPR006059 Bacterial extracellular solute-binding protein DOO79_15640 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein DOO79_15645 IPR005814 Aminotransferase class-III DOO79_15645 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOO79_15645 IPR015424 Pyridoxal phosphate-dependent transferase DOO79_15645 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOO79_15650 IPR008146 Glutamine synthetase, catalytic domain DOO79_15650 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain DOO79_15650 IPR036651 Glutamine synthetase, N-terminal domain superfamily DOO79_15655 IPR011697 Peptidase C26 DOO79_15655 IPR017926 Glutamine amidotransferase DOO79_15655 IPR029062 Class I glutamine amidotransferase-like DOO79_15660 IPR008146 Glutamine synthetase, catalytic domain DOO79_15660 IPR036651 Glutamine synthetase, N-terminal domain superfamily DOO79_15660 IPR027303 Glutamine synthetase, glycine-rich site DOO79_15660 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain DOO79_15665 IPR036188 FAD/NAD(P)-binding domain superfamily DOO79_15665 IPR006076 FAD dependent oxidoreductase DOO79_15670 IPR011006 CheY-like superfamily DOO79_15670 IPR029787 Nucleotide cyclase DOO79_15670 IPR001789 Signal transduction response regulator, receiver domain DOO79_15670 IPR000160 GGDEF domain DOO79_15675 IPR016131 Haemerythrin, iron-binding site DOO79_15675 IPR035938 Hemerythrin-like superfamily DOO79_15675 IPR012827 Haemerythrin, metal-binding domain DOO79_15675 IPR023504 Bacteriohemerythrin-like protein DOO79_15675 IPR012312 Haemerythrin-like DOO79_15680 IPR011701 Major facilitator superfamily DOO79_15680 IPR036259 MFS transporter superfamily DOO79_15680 IPR004736 MFS transporter, metabolite:H symporter DOO79_15680 IPR005828 Major facilitator, sugar transporter-like DOO79_15680 IPR020846 Major facilitator superfamily domain DOO79_15680 IPR005829 Sugar transporter, conserved site DOO79_15690 IPR037951 YdeP-like, MopB domain DOO79_15690 IPR041953 YdeP, molybdopterin-binding oxidoreductase-like domain DOO79_15690 IPR009010 Aspartate decarboxylase-like domain superfamily DOO79_15690 IPR006656 Molybdopterin oxidoreductase DOO79_15690 IPR010046 Oxidoreductase alpha (molybdopterin) subunit DOO79_15695 IPR016193 Cytidine deaminase-like DOO79_15695 IPR003786 Sulfur carrier protein FdhD DOO79_15700 IPR036259 MFS transporter superfamily DOO79_15700 IPR020846 Major facilitator superfamily domain DOO79_15700 IPR011701 Major facilitator superfamily DOO79_15715 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOO79_15715 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOO79_15715 IPR015424 Pyridoxal phosphate-dependent transferase DOO79_15715 IPR005814 Aminotransferase class-III DOO79_15725 IPR007383 Protein of unknown function DUF445 DOO79_15730 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_15730 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_15730 IPR036641 HPT domain superfamily DOO79_15730 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_15730 IPR001789 Signal transduction response regulator, receiver domain DOO79_15730 IPR011006 CheY-like superfamily DOO79_15730 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain DOO79_15730 IPR019247 Histidine kinase BarA, N-terminal DOO79_15730 IPR003660 HAMP domain DOO79_15730 IPR005467 Histidine kinase domain DOO79_15730 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_15730 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOO79_15735 IPR001789 Signal transduction response regulator, receiver domain DOO79_15735 IPR037522 HD-GYP domain DOO79_15735 IPR011006 CheY-like superfamily DOO79_15735 IPR003607 HD/PDEase domain DOO79_15740 IPR004638 Drug resistance transporter EmrB-like DOO79_15740 IPR020846 Major facilitator superfamily domain DOO79_15740 IPR011701 Major facilitator superfamily DOO79_15740 IPR036259 MFS transporter superfamily DOO79_15760 IPR036709 Autotransporter beta-domain superfamily DOO79_15760 IPR000209 Peptidase S8/S53 domain DOO79_15760 IPR036852 Peptidase S8/S53 domain superfamily DOO79_15760 IPR023828 Peptidase S8, subtilisin, Ser-active site DOO79_15760 IPR015500 Peptidase S8, subtilisin-related DOO79_15760 IPR034061 Autotransporter serine protease peptidase domain DOO79_15760 IPR005546 Autotransporter beta-domain DOO79_15770 IPR006143 RND efflux pump, membrane fusion protein DOO79_15770 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DOO79_15785 IPR011006 CheY-like superfamily DOO79_15785 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_15785 IPR005467 Histidine kinase domain DOO79_15785 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOO79_15785 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_15785 IPR001610 PAC motif DOO79_15785 IPR000014 PAS domain DOO79_15785 IPR000700 PAS-associated, C-terminal DOO79_15785 IPR035965 PAS domain superfamily DOO79_15785 IPR013656 PAS fold-4 DOO79_15785 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_15785 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_15785 IPR001789 Signal transduction response regulator, receiver domain DOO79_15790 IPR001789 Signal transduction response regulator, receiver domain DOO79_15790 IPR000792 Transcription regulator LuxR, C-terminal DOO79_15790 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_15790 IPR011006 CheY-like superfamily DOO79_15820 IPR010287 Domain of unknown function DUF892 DOO79_15820 IPR012347 Ferritin-like DOO79_15820 IPR009078 Ferritin-like superfamily DOO79_15860 IPR012409 Sirohaem synthase DOO79_15860 IPR000878 Tetrapyrrole methylase DOO79_15860 IPR035996 Tetrapyrrole methylase superfamily DOO79_15860 IPR014776 Tetrapyrrole methylase, subdomain 2 DOO79_15860 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site DOO79_15860 IPR028281 Siroheme synthase, central domain DOO79_15860 IPR006366 Uroporphyrin-III C-methyltransferase DOO79_15860 IPR014777 Tetrapyrrole methylase, subdomain 1 DOO79_15860 IPR019478 Sirohaem synthase, dimerisation domain DOO79_15860 IPR006367 Sirohaem synthase, N-terminal DOO79_15860 IPR036291 NAD(P)-binding domain superfamily DOO79_15870 IPR029044 Nucleotide-diphospho-sugar transferases DOO79_15870 IPR025877 MobA-like NTP transferase DOO79_15870 IPR013482 Molybdenum cofactor guanylyltransferase DOO79_15885 IPR037493 Exodeoxyribonuclease III-like DOO79_15885 IPR005135 Endonuclease/exonuclease/phosphatase DOO79_15885 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DOO79_15885 IPR020848 AP endonuclease 1, conserved site DOO79_15885 IPR020847 AP endonuclease 1, binding site DOO79_15885 IPR004808 AP endonuclease 1 DOO79_15895 IPR027399 Alcohol dehydrogenase GroES-associated DOO79_15895 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site DOO79_15895 IPR011032 GroES-like superfamily DOO79_15895 IPR036291 NAD(P)-binding domain superfamily DOO79_15895 IPR013154 Alcohol dehydrogenase, N-terminal DOO79_15895 IPR013149 Alcohol dehydrogenase, C-terminal DOO79_15925 IPR000594 THIF-type NAD/FAD binding fold DOO79_15925 IPR035985 Ubiquitin-activating enzyme DOO79_15935 IPR036688 MoeA, C-terminal, domain IV superfamily DOO79_15935 IPR005111 MoeA, C-terminal, domain IV DOO79_15935 IPR038987 Molybdopterin biosynthesis protein MoeA-like DOO79_15935 IPR008284 Molybdenum cofactor biosynthesis, conserved site DOO79_15935 IPR001453 MoaB/Mog domain DOO79_15935 IPR036425 MoaB/Mog-like domain superfamily DOO79_15935 IPR036135 MoeA, N-terminal and linker domain superfamily DOO79_15935 IPR005110 MoeA, N-terminal and linker domain DOO79_15940 IPR005225 Small GTP-binding protein domain DOO79_15940 IPR006073 GTP binding domain DOO79_15940 IPR032859 GTPase Der, C-terminal KH-domain-like DOO79_15940 IPR016484 GTP-binding protein EngA DOO79_15940 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_15940 IPR031166 EngA-type guanine nucleotide-binding (G) domain DOO79_15940 IPR015946 K homology domain-like, alpha/beta DOO79_15940 IPR003593 AAA+ ATPase domain DOO79_15945 IPR017687 Outer membrane protein assembly factor BamB DOO79_15945 IPR002372 Pyrrolo-quinoline quinone repeat DOO79_15945 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DOO79_15945 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily DOO79_15945 IPR015943 WD40/YVTN repeat-like-containing domain superfamily DOO79_15955 IPR023690 Cytoskeleton protein RodZ DOO79_15955 IPR001387 Cro/C1-type helix-turn-helix domain DOO79_15955 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOO79_15955 IPR025194 Domain of unknown function DUF4115 DOO79_15965 IPR013785 Aldolase-type TIM barrel DOO79_15965 IPR027492 Dual-specificity RNA methyltransferase RlmN DOO79_15965 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr DOO79_15965 IPR007197 Radical SAM DOO79_15965 IPR040072 Methyltransferase (Class A) DOO79_15970 IPR023005 Nucleoside diphosphate kinase, active site DOO79_15970 IPR001564 Nucleoside diphosphate kinase DOO79_15970 IPR036850 Nucleoside diphosphate kinase-like domain superfamily DOO79_15970 IPR034907 Nucleoside diphosphate kinase-like domain DOO79_15980 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding DOO79_15980 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DOO79_15980 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOO79_15980 IPR029045 ClpP/crotonase-like domain superfamily DOO79_15980 IPR001753 Enoyl-CoA hydratase/isomerase DOO79_15980 IPR036291 NAD(P)-binding domain superfamily DOO79_15980 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal DOO79_15985 IPR002155 Thiolase DOO79_15985 IPR020617 Thiolase, C-terminal DOO79_15985 IPR020615 Thiolase, acyl-enzyme intermediate active site DOO79_15985 IPR020610 Thiolase, active site DOO79_15985 IPR020613 Thiolase, conserved site DOO79_15985 IPR020616 Thiolase, N-terminal DOO79_15985 IPR016039 Thiolase-like DOO79_15995 IPR003691 Putative fluoride ion transporter CrcB DOO79_16000 IPR003593 AAA+ ATPase domain DOO79_16000 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal DOO79_16000 IPR021886 MgsA AAA+ ATPase C-terminal DOO79_16000 IPR032423 AAA C-terminal domain DOO79_16000 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_16000 IPR003959 ATPase, AAA-type, core DOO79_16010 IPR029046 Lipoprotein localisation LolA/LolB/LppX DOO79_16010 IPR004564 Outer membrane lipoprotein carrier protein LolA-like DOO79_16010 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria DOO79_16020 IPR002543 FtsK domain DOO79_16020 IPR041027 FtsK alpha domain DOO79_16020 IPR018541 FtsK gamma domain DOO79_16020 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_16020 IPR003593 AAA+ ATPase domain DOO79_16020 IPR036390 Winged helix DNA-binding domain superfamily DOO79_16020 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_16020 IPR025199 DNA translocase FtsK, 4TM region DOO79_16025 IPR023753 FAD/NAD(P)-binding domain DOO79_16025 IPR036188 FAD/NAD(P)-binding domain superfamily DOO79_16025 IPR005982 Thioredoxin reductase DOO79_16025 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site DOO79_16040 IPR004368 Translation initiation factor IF-1 DOO79_16040 IPR006196 RNA-binding domain, S1, IF1 type DOO79_16040 IPR022967 RNA-binding domain, S1 DOO79_16040 IPR012340 Nucleic acid-binding, OB-fold DOO79_16045 IPR036628 Clp, N-terminal domain superfamily DOO79_16045 IPR041546 ClpA/ClpB, AAA lid domain DOO79_16045 IPR028299 ClpA/B, conserved site 2 DOO79_16045 IPR018368 ClpA/B, conserved site 1 DOO79_16045 IPR003959 ATPase, AAA-type, core DOO79_16045 IPR019489 Clp ATPase, C-terminal DOO79_16045 IPR003593 AAA+ ATPase domain DOO79_16045 IPR004176 Clp, N-terminal DOO79_16045 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA DOO79_16045 IPR001270 ClpA/B family DOO79_16045 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_16050 IPR022935 ATP-dependent Clp protease adaptor protein ClpS DOO79_16050 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DOO79_16050 IPR003769 Adaptor protein ClpS, core DOO79_16055 IPR015797 NUDIX hydrolase-like domain superfamily DOO79_16055 IPR020084 NUDIX hydrolase, conserved site DOO79_16055 IPR000086 NUDIX hydrolase domain DOO79_16055 IPR033713 Phosphatase NudJ DOO79_16055 IPR020476 NUDIX hydrolase DOO79_16060 IPR023382 Adenine nucleotide alpha hydrolase-like domains DOO79_16060 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOO79_16060 IPR004506 tRNA-specific 2-thiouridylase DOO79_16065 IPR007451 High frequency lysogenization protein HflD DOO79_16065 IPR035932 HflD-like superfamily DOO79_16070 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DOO79_16070 IPR000727 Target SNARE coiled-coil homology domain DOO79_16070 IPR003660 HAMP domain DOO79_16070 IPR004090 Chemotaxis methyl-accepting receptor DOO79_16070 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DOO79_16085 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_16085 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_16085 IPR005467 Histidine kinase domain DOO79_16085 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_16085 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain DOO79_16085 IPR017203 Signal transduction histidine kinase, NreB DOO79_16090 IPR005330 MHYT domain DOO79_16090 IPR035919 EAL domain superfamily DOO79_16090 IPR029787 Nucleotide cyclase DOO79_16090 IPR000160 GGDEF domain DOO79_16090 IPR001633 EAL domain DOO79_16095 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_16095 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_16095 IPR005467 Histidine kinase domain DOO79_16095 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOO79_16095 IPR000014 PAS domain DOO79_16095 IPR035965 PAS domain superfamily DOO79_16095 IPR013767 PAS fold DOO79_16095 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_16095 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_16115 IPR002545 CheW-like domain DOO79_16115 IPR024181 Chemotaxis response regulator CheV DOO79_16115 IPR036061 CheW-like domain superfamily DOO79_16115 IPR011006 CheY-like superfamily DOO79_16115 IPR001789 Signal transduction response regulator, receiver domain DOO79_16120 IPR006300 Flagellar basal-body rod protein FlgB DOO79_16120 IPR019776 Flagellar basal body rod protein, conserved site DOO79_16125 IPR006299 Flagellar basal-body rod protein FlgC DOO79_16125 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DOO79_16125 IPR019776 Flagellar basal body rod protein, conserved site DOO79_16125 IPR001444 Flagellar basal body rod protein, N-terminal DOO79_16130 IPR005648 Flagellar hook capping protein DOO79_16135 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DOO79_16135 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like DOO79_16135 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DOO79_16135 IPR011491 Flagellar hook protein FlgE DOO79_16135 IPR001444 Flagellar basal body rod protein, N-terminal DOO79_16135 IPR019776 Flagellar basal body rod protein, conserved site DOO79_16135 IPR037058 Flagellar hook protein FlgE superfamily DOO79_16140 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like DOO79_16140 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DOO79_16140 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DOO79_16140 IPR019776 Flagellar basal body rod protein, conserved site DOO79_16140 IPR001444 Flagellar basal body rod protein, N-terminal DOO79_16150 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DOO79_16150 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like DOO79_16150 IPR019776 Flagellar basal body rod protein, conserved site DOO79_16150 IPR001444 Flagellar basal body rod protein, N-terminal DOO79_16150 IPR012834 Flagellar basal-body rod FlgG DOO79_16150 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DOO79_16155 IPR000527 Flagellar L-ring protein DOO79_16160 IPR001782 Flagellar P-ring protein DOO79_16165 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain DOO79_16165 IPR019301 Flagellar protein FlgJ, N-terminal DOO79_16165 IPR013377 Peptidoglycan hydrolase FlgJ DOO79_16170 IPR002371 Flagellar hook-associated protein 1 DOO79_16170 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DOO79_16170 IPR010810 Flagellin hook, IN motif DOO79_16175 IPR013384 Flagellar hook-associated protein 3 DOO79_16175 IPR001029 Flagellin, D0/D1 domain DOO79_16180 IPR001492 Flagellin DOO79_16180 IPR042187 Flagellin, C-terminal domain, subdomain 2 DOO79_16180 IPR001029 Flagellin, D0/D1 domain DOO79_16185 IPR010810 Flagellin hook, IN motif DOO79_16185 IPR040026 Flagellar hook-associated protein 2 DOO79_16185 IPR010809 Flagellar hook-associated protein 2, C-terminal DOO79_16185 IPR003481 Flagellar hook-associated protein 2, N-terminal DOO79_16190 IPR003713 Flagellar protein FliS DOO79_16190 IPR036584 Flagellar protein FliS superfamily DOO79_16205 IPR016032 Signal transduction response regulator, C-terminal effector DOO79_16205 IPR000792 Transcription regulator LuxR, C-terminal DOO79_16205 IPR011006 CheY-like superfamily DOO79_16205 IPR001789 Signal transduction response regulator, receiver domain DOO79_16210 IPR007046 RNA polymerase sigma factor 54, core-binding domain DOO79_16210 IPR000394 RNA polymerase sigma factor 54 DOO79_16210 IPR007634 RNA polymerase sigma factor 54, DNA-binding DOO79_16210 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily DOO79_16215 IPR001789 Signal transduction response regulator, receiver domain DOO79_16215 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase DOO79_16215 IPR011006 CheY-like superfamily DOO79_16215 IPR035909 Methylesterase CheB, C-terminal DOO79_16215 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type DOO79_16220 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DOO79_16220 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DOO79_16220 IPR003593 AAA+ ATPase domain DOO79_16220 IPR011006 CheY-like superfamily DOO79_16220 IPR010518 Flagellar regulatory FleQ DOO79_16220 IPR009057 Homeobox-like domain superfamily DOO79_16220 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_16220 IPR025944 Sigma-54 interaction domain, conserved site DOO79_16220 IPR002078 RNA polymerase sigma factor 54 interaction domain DOO79_16220 IPR002197 DNA binding HTH domain, Fis-type DOO79_16260 IPR002347 Short-chain dehydrogenase/reductase SDR DOO79_16260 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOO79_16260 IPR036291 NAD(P)-binding domain superfamily DOO79_16265 IPR002347 Short-chain dehydrogenase/reductase SDR DOO79_16265 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase DOO79_16265 IPR036291 NAD(P)-binding domain superfamily DOO79_16305 IPR001296 Glycosyl transferase, family 1 DOO79_16305 IPR001173 Glycosyltransferase 2-like DOO79_16305 IPR029044 Nucleotide-diphospho-sugar transferases DOO79_16310 IPR001624 Flagellar hook-basal body complex protein FliE DOO79_16315 IPR000067 Flagellar M-ring protein FliF DOO79_16315 IPR006182 Secretory protein YscJ/FliF DOO79_16315 IPR013556 Flagellar M-ring C-terminal DOO79_16320 IPR011002 Flagellar motor switch protein FliG, alpha-helical DOO79_16320 IPR032779 Flagellar motor switch protein FliG, middle domain DOO79_16320 IPR028263 Flagellar motor switch protein FliG, N-terminal domain DOO79_16320 IPR023087 Flagellar motor switch protein FliG, C-terminal DOO79_16320 IPR000090 Flagellar motor switch protein FliG DOO79_16330 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_16330 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site DOO79_16330 IPR003593 AAA+ ATPase domain DOO79_16330 IPR040627 T3SS EscN ATPase, C-terminal DOO79_16330 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain DOO79_16330 IPR020005 Flagellar export ATPase FliI, clade 1 DOO79_16330 IPR005714 ATPase, type III secretion system, FliI/YscN DOO79_16330 IPR032463 ATPase, type III secretion system, FliI DOO79_16350 IPR028976 CheC-like superfamily DOO79_16350 IPR001689 Flagellar motor switch protein FliM DOO79_16350 IPR036429 SpoA-like superfamily DOO79_16350 IPR001543 Surface presentation of antigen (SpoA) DOO79_16355 IPR001543 Surface presentation of antigen (SpoA) DOO79_16355 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb DOO79_16355 IPR012826 Flagellar motor switch FliN DOO79_16355 IPR036429 SpoA-like superfamily DOO79_16360 IPR022781 Flagellar biosynthesis protein, FliO DOO79_16365 IPR005838 Type III secretion system inner membrane P protein DOO79_16365 IPR005837 Flagellar transport protein FliP DOO79_16375 IPR002191 Bacterial export protein family 3 DOO79_16375 IPR006305 Flagellar biosynthesis protein FliQ DOO79_16380 IPR002010 Type III secretion system inner membrane R protein DOO79_16380 IPR006303 Flagellar biosynthesis protein FliR DOO79_16385 IPR035965 PAS domain superfamily DOO79_16385 IPR029787 Nucleotide cyclase DOO79_16385 IPR005330 MHYT domain DOO79_16385 IPR035919 EAL domain superfamily DOO79_16385 IPR001633 EAL domain DOO79_16385 IPR000014 PAS domain DOO79_16385 IPR000160 GGDEF domain DOO79_16405 IPR006136 Flagellar biosynthetic protein FlhB DOO79_16405 IPR006135 Type III secretion system substrate exporter DOO79_16405 IPR029025 Type III secretion system substrate exporter, C-terminal DOO79_16410 IPR042196 FHIPEP, domain 4 DOO79_16410 IPR042193 FHIPEP, domain 3 DOO79_16410 IPR042194 FHIPEP, domain 1 DOO79_16410 IPR025505 FHIPEP conserved site DOO79_16410 IPR006301 Flagellar biosynthesis protein FlhA DOO79_16410 IPR001712 Type III secretion system FHIPEP DOO79_16420 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 DOO79_16420 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_16420 IPR025501 ATP binding protein MinD DOO79_16425 IPR013324 RNA polymerase sigma factor, region 3/4-like DOO79_16425 IPR014284 RNA polymerase sigma-70 like domain DOO79_16425 IPR007627 RNA polymerase sigma-70 region 2 DOO79_16425 IPR000943 RNA polymerase sigma-70 DOO79_16425 IPR007624 RNA polymerase sigma-70 region 3 DOO79_16425 IPR007630 RNA polymerase sigma-70 region 4 DOO79_16425 IPR012845 RNA polymerase sigma factor, FliA/WhiG DOO79_16425 IPR013325 RNA polymerase sigma factor, region 2 DOO79_16425 IPR028617 RNA polymerase sigma factor FliA DOO79_16430 IPR011006 CheY-like superfamily DOO79_16430 IPR001789 Signal transduction response regulator, receiver domain DOO79_16435 IPR007439 Chemotaxis phosphatase, CheZ DOO79_16440 IPR001789 Signal transduction response regulator, receiver domain DOO79_16440 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain DOO79_16440 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_16440 IPR036641 HPT domain superfamily DOO79_16440 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_16440 IPR005467 Histidine kinase domain DOO79_16440 IPR011006 CheY-like superfamily DOO79_16440 IPR036061 CheW-like domain superfamily DOO79_16440 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily DOO79_16440 IPR004105 Histidine kinase CheA-like, homodimeric domain DOO79_16440 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_16440 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_16440 IPR002545 CheW-like domain DOO79_16455 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme DOO79_16455 IPR023885 4Fe4S-binding SPASM domain DOO79_16455 IPR013785 Aldolase-type TIM barrel DOO79_16455 IPR007197 Radical SAM DOO79_16490 IPR000540 Flagellar motor protein MotA, conserved site DOO79_16490 IPR002898 MotA/TolQ/ExbB proton channel DOO79_16495 IPR036737 OmpA-like domain superfamily DOO79_16495 IPR006665 OmpA-like domain DOO79_16495 IPR025713 Motility protein B, N-terminal domain DOO79_16500 IPR025669 AAA domain DOO79_16500 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_16515 IPR011006 CheY-like superfamily DOO79_16515 IPR001789 Signal transduction response regulator, receiver domain DOO79_16520 IPR004105 Histidine kinase CheA-like, homodimeric domain DOO79_16520 IPR036061 CheW-like domain superfamily DOO79_16520 IPR002545 CheW-like domain DOO79_16520 IPR036641 HPT domain superfamily DOO79_16520 IPR015162 CheY binding DOO79_16520 IPR035891 CheY-binding domain of CheA DOO79_16520 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_16520 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_16520 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain DOO79_16520 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_16520 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_16520 IPR005467 Histidine kinase domain DOO79_16520 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily DOO79_16525 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DOO79_16525 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DOO79_16525 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DOO79_16525 IPR003660 HAMP domain DOO79_16525 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DOO79_16525 IPR004090 Chemotaxis methyl-accepting receptor DOO79_16535 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DOO79_16535 IPR004010 Double Cache domain 2 DOO79_16535 IPR004010 Double Cache domain 2 DOO79_16535 IPR004090 Chemotaxis methyl-accepting receptor DOO79_16535 IPR033480 Single Cache domain 2 DOO79_16535 IPR000727 Target SNARE coiled-coil homology domain DOO79_16535 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DOO79_16535 IPR000727 Target SNARE coiled-coil homology domain DOO79_16535 IPR004090 Chemotaxis methyl-accepting receptor DOO79_16535 IPR003660 HAMP domain DOO79_16535 IPR033480 Single Cache domain 2 DOO79_16535 IPR003660 HAMP domain DOO79_16540 IPR003660 HAMP domain DOO79_16540 IPR004090 Chemotaxis methyl-accepting receptor DOO79_16540 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DOO79_16540 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DOO79_16540 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DOO79_16540 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DOO79_16555 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DOO79_16555 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DOO79_16555 IPR003660 HAMP domain DOO79_16555 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DOO79_16555 IPR004090 Chemotaxis methyl-accepting receptor DOO79_16555 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DOO79_16560 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DOO79_16560 IPR004090 Chemotaxis methyl-accepting receptor DOO79_16560 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DOO79_16560 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DOO79_16560 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DOO79_16560 IPR003660 HAMP domain DOO79_16570 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DOO79_16570 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DOO79_16570 IPR003660 HAMP domain DOO79_16570 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DOO79_16570 IPR004090 Chemotaxis methyl-accepting receptor DOO79_16570 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DOO79_16575 IPR004090 Chemotaxis methyl-accepting receptor DOO79_16575 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DOO79_16575 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DOO79_16575 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DOO79_16575 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DOO79_16575 IPR003660 HAMP domain DOO79_16585 IPR004090 Chemotaxis methyl-accepting receptor DOO79_16585 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DOO79_16585 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DOO79_16585 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DOO79_16585 IPR003660 HAMP domain DOO79_16585 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DOO79_16590 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DOO79_16590 IPR003660 HAMP domain DOO79_16590 IPR004090 Chemotaxis methyl-accepting receptor DOO79_16590 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DOO79_16590 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DOO79_16590 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DOO79_16595 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DOO79_16595 IPR003660 HAMP domain DOO79_16595 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DOO79_16595 IPR004090 Chemotaxis methyl-accepting receptor DOO79_16595 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DOO79_16595 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DOO79_16600 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DOO79_16600 IPR003660 HAMP domain DOO79_16600 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DOO79_16600 IPR004090 Chemotaxis methyl-accepting receptor DOO79_16600 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DOO79_16600 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DOO79_16605 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DOO79_16605 IPR003660 HAMP domain DOO79_16605 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DOO79_16605 IPR004090 Chemotaxis methyl-accepting receptor DOO79_16605 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DOO79_16605 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DOO79_16610 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal DOO79_16610 IPR023787 Type III secretion system flagellar brake protein YcgR DOO79_16610 IPR012349 FMN-binding split barrel DOO79_16610 IPR009875 PilZ domain DOO79_16615 IPR039315 Chemotaxis protein CheW DOO79_16615 IPR036061 CheW-like domain superfamily DOO79_16615 IPR002545 CheW-like domain DOO79_16625 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DOO79_16625 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DOO79_16625 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DOO79_16625 IPR003660 HAMP domain DOO79_16625 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DOO79_16625 IPR004090 Chemotaxis methyl-accepting receptor DOO79_16630 IPR000780 MCP methyltransferase, CheR-type DOO79_16630 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal DOO79_16630 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal DOO79_16630 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOO79_16630 IPR026024 Chemotaxis protein methyltransferase CheR DOO79_16630 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily DOO79_16635 IPR038592 CheD-like superfamily DOO79_16635 IPR005659 Chemoreceptor glutamine deamidase CheD DOO79_16635 IPR011324 Cytotoxic necrotizing factor-like, catalytic DOO79_16640 IPR035909 Methylesterase CheB, C-terminal DOO79_16640 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase DOO79_16640 IPR001789 Signal transduction response regulator, receiver domain DOO79_16640 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type DOO79_16640 IPR011006 CheY-like superfamily DOO79_16645 IPR000160 GGDEF domain DOO79_16645 IPR035919 EAL domain superfamily DOO79_16645 IPR005330 MHYT domain DOO79_16645 IPR001633 EAL domain DOO79_16645 IPR029787 Nucleotide cyclase DOO79_16650 IPR029058 Alpha/Beta hydrolase fold DOO79_16650 IPR019913 Pyrimidine utilisation protein RutD DOO79_16650 IPR000073 Alpha/beta hydrolase fold-1 DOO79_16655 IPR015929 Aconitase B, swivel DOO79_16655 IPR036288 Aconitase B, HEAT-like domain superfamily DOO79_16655 IPR015933 Aconitase B, HEAT-like domain DOO79_16655 IPR004406 Aconitase B DOO79_16655 IPR036008 Aconitase, iron-sulfur domain DOO79_16655 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 DOO79_16655 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain DOO79_16655 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel DOO79_16655 IPR018136 Aconitase family, 4Fe-4S cluster binding site DOO79_16655 IPR015932 Aconitase, domain 2 DOO79_16670 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel DOO79_16670 IPR006249 Aconitase/Iron-responsive element-binding protein 2 DOO79_16670 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 DOO79_16670 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain DOO79_16670 IPR036008 Aconitase, iron-sulfur domain DOO79_16670 IPR018136 Aconitase family, 4Fe-4S cluster binding site DOO79_16670 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain DOO79_16680 IPR020845 AMP-binding, conserved site DOO79_16680 IPR000873 AMP-dependent synthetase/ligase DOO79_16680 IPR025110 AMP-binding enzyme, C-terminal domain DOO79_16680 IPR042099 AMP-dependent synthetase-like superfamily DOO79_16715 IPR014748 Enoyl-CoA hydratase, C-terminal DOO79_16715 IPR029045 ClpP/crotonase-like domain superfamily DOO79_16715 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site DOO79_16715 IPR001753 Enoyl-CoA hydratase/isomerase DOO79_16720 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain DOO79_16720 IPR001789 Signal transduction response regulator, receiver domain DOO79_16720 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_16720 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_16720 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOO79_16720 IPR005467 Histidine kinase domain DOO79_16720 IPR011006 CheY-like superfamily DOO79_16720 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_16720 IPR036641 HPT domain superfamily DOO79_16720 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_16725 IPR011006 CheY-like superfamily DOO79_16725 IPR001789 Signal transduction response regulator, receiver domain DOO79_16725 IPR003607 HD/PDEase domain DOO79_16725 IPR037522 HD-GYP domain DOO79_16730 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal DOO79_16730 IPR006195 Aminoacyl-tRNA synthetase, class II DOO79_16730 IPR012340 Nucleic acid-binding, OB-fold DOO79_16730 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) DOO79_16730 IPR002313 Lysine-tRNA ligase, class II DOO79_16730 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type DOO79_16740 IPR001789 Signal transduction response regulator, receiver domain DOO79_16740 IPR007492 LytTR DNA-binding domain DOO79_16740 IPR011006 CheY-like superfamily DOO79_16790 IPR004610 Bacterial RecJ exonuclease DOO79_16790 IPR003156 DHHA1 domain DOO79_16790 IPR001667 DDH domain DOO79_16790 IPR041122 RecJ, OB domain DOO79_16790 IPR038763 DHH phosphoesterase superfamily DOO79_16800 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal DOO79_16800 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily DOO79_16800 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily DOO79_16800 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal DOO79_16800 IPR028624 Transcription elongation factor GreA/GreB DOO79_16800 IPR023459 Transcription elongation factor GreA/GreB family DOO79_16800 IPR018151 Transcription elongation factor, GreA/GreB, conserved site DOO79_16800 IPR006359 Transcription elongation factor GreA DOO79_16805 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain DOO79_16805 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain DOO79_16805 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily DOO79_16805 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain DOO79_16805 IPR006275 Carbamoyl-phosphate synthase, large subunit DOO79_16805 IPR011607 Methylglyoxal synthase-like domain DOO79_16805 IPR016185 Pre-ATP-grasp domain superfamily DOO79_16805 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain DOO79_16805 IPR011761 ATP-grasp fold DOO79_16805 IPR036914 Methylglyoxal synthase-like domain superfamily DOO79_16815 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily DOO79_16815 IPR006274 Carbamoyl-phosphate synthase, small subunit DOO79_16815 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain DOO79_16815 IPR017926 Glutamine amidotransferase DOO79_16815 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain DOO79_16815 IPR029062 Class I glutamine amidotransferase-like DOO79_16820 IPR023940 Dihydrodipicolinate reductase DOO79_16820 IPR022663 Dihydrodipicolinate reductase, C-terminal DOO79_16820 IPR000846 Dihydrodipicolinate reductase, N-terminal DOO79_16820 IPR022664 Dihydrodipicolinate reductase, conserved site DOO79_16820 IPR036291 NAD(P)-binding domain superfamily DOO79_16825 IPR011037 Pyruvate kinase-like, insert domain superfamily DOO79_16825 IPR005163 3-alpha domain DOO79_16825 IPR005302 Molybdenum cofactor sulfurase, C-terminal DOO79_16845 IPR003373 Ferrous iron transport protein B DOO79_16845 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_16845 IPR006073 GTP binding domain DOO79_16845 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain DOO79_16845 IPR011640 Ferrous iron transport protein B, C-terminal DOO79_16845 IPR030389 FeoB-type guanine nucleotide-binding (G) domain DOO79_16855 IPR001753 Enoyl-CoA hydratase/isomerase DOO79_16855 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site DOO79_16855 IPR029045 ClpP/crotonase-like domain superfamily DOO79_16855 IPR014748 Enoyl-CoA hydratase, C-terminal DOO79_16865 IPR000891 Pyruvate carboxyltransferase DOO79_16865 IPR013785 Aldolase-type TIM barrel DOO79_16865 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site DOO79_16870 IPR002347 Short-chain dehydrogenase/reductase SDR DOO79_16870 IPR036291 NAD(P)-binding domain superfamily DOO79_16870 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOO79_16875 IPR013852 Translation elongation factor P/YeiP, conserved site DOO79_16875 IPR008991 Translation protein SH3-like domain superfamily DOO79_16875 IPR011897 Translation elongation factor P-like, YeiP DOO79_16875 IPR013185 Translation elongation factor, KOW-like DOO79_16875 IPR020599 Translation elongation factor P/YeiP DOO79_16875 IPR014722 Ribosomal protein L2, domain 2 DOO79_16875 IPR012340 Nucleic acid-binding, OB-fold DOO79_16875 IPR015365 Elongation factor P, C-terminal DOO79_16875 IPR001059 Translation elongation factor P/YeiP, central DOO79_16895 IPR036318 FAD-binding, type PCMH-like superfamily DOO79_16895 IPR004490 Glycolate oxidase subunit GlcD DOO79_16895 IPR006094 FAD linked oxidase, N-terminal DOO79_16895 IPR004113 FAD-linked oxidase, C-terminal DOO79_16895 IPR016164 FAD-linked oxidase-like, C-terminal DOO79_16895 IPR016166 FAD-binding domain, PCMH-type DOO79_16895 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 DOO79_16900 IPR036291 NAD(P)-binding domain superfamily DOO79_16900 IPR002912 ACT domain DOO79_16900 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DOO79_16900 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DOO79_16900 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DOO79_16900 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain DOO79_16910 IPR002293 Amino acid/polyamine transporter I DOO79_16910 IPR004758 Amino acid transporter DOO79_16920 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DOO79_16920 IPR017722 Phosphonate utilization transcriptional regulator PhnR DOO79_16920 IPR000524 Transcription regulator HTH, GntR DOO79_16920 IPR011663 UbiC transcription regulator-associated DOO79_16920 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_16920 IPR036390 Winged helix DNA-binding domain superfamily DOO79_16985 IPR002293 Amino acid/polyamine transporter I DOO79_16985 IPR004758 Amino acid transporter DOO79_16990 IPR017714 Methylthioribulose-1-phosphate dehydratase DOO79_16990 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DOO79_16990 IPR001303 Class II aldolase/adducin N-terminal DOO79_16995 IPR004313 Acireductone dioxygenase ARD family DOO79_16995 IPR023956 Acireductone dioxygenase ARD, bacteria DOO79_16995 IPR014710 RmlC-like jelly roll fold DOO79_16995 IPR011051 RmlC-like cupin domain superfamily DOO79_17000 IPR023943 Enolase-phosphatase E1 DOO79_17000 IPR036412 HAD-like superfamily DOO79_17000 IPR006439 HAD hydrolase, subfamily IA DOO79_17000 IPR023214 HAD superfamily DOO79_17015 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase DOO79_17015 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain DOO79_17015 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily DOO79_17015 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like DOO79_17015 IPR023019 Histidine biosynthesis bifunctional protein HisIE DOO79_17020 IPR013785 Aldolase-type TIM barrel DOO79_17020 IPR006062 Histidine biosynthesis DOO79_17020 IPR004651 Histidine biosynthesis, HisF DOO79_17020 IPR011060 Ribulose-phosphate binding barrel DOO79_17025 IPR011060 Ribulose-phosphate binding barrel DOO79_17025 IPR013785 Aldolase-type TIM barrel DOO79_17025 IPR006062 Histidine biosynthesis DOO79_17025 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA DOO79_17025 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase DOO79_17030 IPR010139 Imidazole glycerol phosphate synthase, subunit H DOO79_17030 IPR029062 Class I glutamine amidotransferase-like DOO79_17030 IPR017926 Glutamine amidotransferase DOO79_17035 IPR020568 Ribosomal protein S5 domain 2-type fold DOO79_17035 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site DOO79_17035 IPR006549 HAD-superfamily hydrolase,subfamily IIIA DOO79_17035 IPR036412 HAD-like superfamily DOO79_17035 IPR000807 Imidazoleglycerol-phosphate dehydratase DOO79_17035 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily DOO79_17035 IPR023214 HAD superfamily DOO79_17035 IPR020566 Histidine biosynthesis bifunctional protein HisB DOO79_17035 IPR005954 Histidinol-phosphatase DOO79_17035 IPR006543 Histidinol-phosphate phosphatase DOO79_17040 IPR004839 Aminotransferase, class I/classII DOO79_17040 IPR005861 Histidinol-phosphate aminotransferase family DOO79_17040 IPR015424 Pyridoxal phosphate-dependent transferase DOO79_17040 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOO79_17040 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOO79_17045 IPR016161 Aldehyde/histidinol dehydrogenase DOO79_17045 IPR001692 Histidinol dehydrogenase, conserved site DOO79_17045 IPR022695 Histidinol dehydrogenase, monofunctional DOO79_17045 IPR012131 Histidinol dehydrogenase DOO79_17050 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DOO79_17050 IPR013820 ATP phosphoribosyltransferase, catalytic domain DOO79_17050 IPR001348 ATP phosphoribosyltransferase HisG DOO79_17050 IPR018198 ATP phosphoribosyltransferase, conserved site DOO79_17050 IPR013115 Histidine biosynthesis HisG, C-terminal DOO79_17050 IPR020621 ATP phosphoribosyltransferase HisG, long form DOO79_17060 IPR033656 Histidyl-anticodon-binding DOO79_17060 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain DOO79_17060 IPR015807 Histidine-tRNA ligase DOO79_17060 IPR036621 Anticodon-binding domain superfamily DOO79_17060 IPR006195 Aminoacyl-tRNA synthetase, class II DOO79_17060 IPR004154 Anticodon-binding DOO79_17060 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit DOO79_17065 IPR000595 Cyclic nucleotide-binding domain DOO79_17065 IPR036390 Winged helix DNA-binding domain superfamily DOO79_17065 IPR014710 RmlC-like jelly roll fold DOO79_17065 IPR018335 Transcription regulator HTH, Crp-type, conserved site DOO79_17065 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_17065 IPR012318 Crp-type HTH domain DOO79_17065 IPR018490 Cyclic nucleotide-binding-like DOO79_17075 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DOO79_17075 IPR004450 Threonine synthase-like DOO79_17075 IPR037158 Threonine synthase, N-terminal domain superfamily DOO79_17075 IPR029144 Threonine synthase, N-terminal DOO79_17075 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site DOO79_17075 IPR001926 Pyridoxal-phosphate dependent enzyme DOO79_17085 IPR036554 GHMP kinase, C-terminal domain superfamily DOO79_17085 IPR013750 GHMP kinase, C-terminal domain DOO79_17085 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOO79_17085 IPR020568 Ribosomal protein S5 domain 2-type fold DOO79_17085 IPR006204 GHMP kinase N-terminal domain DOO79_17085 IPR000870 Homoserine kinase DOO79_17090 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding DOO79_17090 IPR027795 CASTOR, ACT domain DOO79_17090 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I DOO79_17090 IPR001341 Aspartate kinase DOO79_17090 IPR036291 NAD(P)-binding domain superfamily DOO79_17090 IPR018042 Aspartate kinase, conserved site DOO79_17090 IPR036393 Acetylglutamate kinase-like superfamily DOO79_17090 IPR001048 Aspartate/glutamate/uridylate kinase DOO79_17090 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain DOO79_17090 IPR002912 ACT domain DOO79_17090 IPR001342 Homoserine dehydrogenase, catalytic DOO79_17090 IPR019811 Homoserine dehydrogenase, conserved site DOO79_17100 IPR024973 ESPR domain DOO79_17100 IPR011050 Pectin lyase fold/virulence factor DOO79_17100 IPR012334 Pectin lyase fold DOO79_17100 IPR025157 Hemagglutinin repeat DOO79_17100 IPR008638 Filamentous haemagglutinin, N-terminal DOO79_17100 IPR008619 Filamentous haemagglutinin repeat DOO79_17100 IPR033806 CDI toxin, Bp1026b-like DOO79_17100 IPR040559 tRNA nuclease CdiA, C-terminal DOO79_17150 IPR013686 Polypeptide-transport-associated, ShlB-type DOO79_17150 IPR005565 Haemolysin activator HlyB, C-terminal DOO79_17150 IPR027282 Two partner secretion pathway transporter DOO79_17150 IPR035251 ShlB, POTRA domain DOO79_17150 IPR034746 POTRA domain DOO79_17160 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB DOO79_17160 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal DOO79_17160 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel DOO79_17160 IPR002509 NodB homology domain DOO79_17190 IPR003996 RTX toxin-activating protein C, bacteria DOO79_17255 IPR006311 Twin-arginine translocation pathway, signal sequence DOO79_17255 IPR013783 Immunoglobulin-like fold DOO79_17255 IPR008979 Galactose-binding-like domain superfamily DOO79_17255 IPR011081 Bacterial Ig-related DOO79_17255 IPR012341 Six-hairpin glycosidase-like superfamily DOO79_17255 IPR008928 Six-hairpin glycosidase superfamily DOO79_17265 IPR037066 TonB-dependent receptor, plug domain superfamily DOO79_17265 IPR010916 TonB box, conserved site DOO79_17265 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DOO79_17265 IPR010917 TonB-dependent receptor, conserved site DOO79_17265 IPR000531 TonB-dependent receptor-like, beta-barrel DOO79_17265 IPR010101 TonB-dependent vitamin B12 transporter BtuB DOO79_17265 IPR012910 TonB-dependent receptor, plug domain DOO79_17265 IPR039426 Vitamin B12 transporter BtuB-like DOO79_17305 IPR002293 Amino acid/polyamine transporter I DOO79_17325 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DOO79_17325 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site DOO79_17325 IPR000587 Creatinase, N-terminal DOO79_17325 IPR001714 Peptidase M24, methionine aminopeptidase DOO79_17325 IPR036005 Creatinase/aminopeptidase-like DOO79_17325 IPR000994 Peptidase M24 DOO79_17330 IPR016161 Aldehyde/histidinol dehydrogenase DOO79_17330 IPR016163 Aldehyde dehydrogenase, C-terminal DOO79_17330 IPR016162 Aldehyde dehydrogenase, N-terminal DOO79_17330 IPR015590 Aldehyde dehydrogenase domain DOO79_17335 IPR002220 DapA-like DOO79_17335 IPR020625 Schiff base-forming aldolase, active site DOO79_17335 IPR020624 Schiff base-forming aldolase, conserved site DOO79_17335 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA DOO79_17335 IPR013785 Aldolase-type TIM barrel DOO79_17340 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily DOO79_17340 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B DOO79_17340 IPR036188 FAD/NAD(P)-binding domain superfamily DOO79_17340 IPR007419 BFD-like [2Fe-2S]-binding domain DOO79_17340 IPR023753 FAD/NAD(P)-binding domain DOO79_17350 IPR006076 FAD dependent oxidoreductase DOO79_17350 IPR012727 Glycine oxidase ThiO DOO79_17350 IPR036188 FAD/NAD(P)-binding domain superfamily DOO79_17355 IPR008794 Proline racemase family DOO79_17365 IPR036225 SRP/SRP receptor, N-terminal DOO79_17365 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain DOO79_17365 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_17365 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily DOO79_17365 IPR004390 Signal-recognition particle receptor FtsY DOO79_17365 IPR013822 Signal recognition particle SRP54, helical bundle DOO79_17365 IPR003593 AAA+ ATPase domain DOO79_17375 IPR003265 HhH-GPD domain DOO79_17375 IPR000445 Helix-hairpin-helix motif DOO79_17375 IPR004035 Endonuclease III, iron-sulphur binding site DOO79_17375 IPR005760 A/G-specific adenine glycosylase MutY DOO79_17375 IPR011257 DNA glycosylase DOO79_17375 IPR004036 Endonuclease III-like, conserved site-2 DOO79_17375 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif DOO79_17375 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal DOO79_17375 IPR029119 MutY, C-terminal DOO79_17375 IPR015797 NUDIX hydrolase-like domain superfamily DOO79_17380 IPR007457 Fe(II) trafficking protein YggX DOO79_17380 IPR036766 Fe(II) trafficking protein YggX superfamily DOO79_17385 IPR011006 CheY-like superfamily DOO79_17385 IPR000700 PAS-associated, C-terminal DOO79_17385 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_17385 IPR001789 Signal transduction response regulator, receiver domain DOO79_17385 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_17385 IPR035965 PAS domain superfamily DOO79_17385 IPR000014 PAS domain DOO79_17385 IPR001610 PAC motif DOO79_17385 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_17385 IPR005467 Histidine kinase domain DOO79_17385 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOO79_17385 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_17430 IPR000566 Lipocalin/cytosolic fatty-acid binding domain DOO79_17430 IPR012674 Calycin DOO79_17430 IPR022271 Lipocalin, ApoD type DOO79_17430 IPR002446 Lipocalin, bacterial DOO79_17430 IPR022272 Lipocalin family conserved site DOO79_17445 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DOO79_17445 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DOO79_17445 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily DOO79_17445 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DOO79_17445 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DOO79_17445 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DOO79_17445 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain DOO79_17455 IPR033248 Transketolase, C-terminal domain DOO79_17455 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II DOO79_17455 IPR020826 Transketolase binding site DOO79_17455 IPR005474 Transketolase, N-terminal DOO79_17455 IPR005475 Transketolase-like, pyrimidine-binding domain DOO79_17455 IPR005477 Deoxyxylulose-5-phosphate synthase DOO79_17455 IPR029061 Thiamin diphosphate-binding fold DOO79_17475 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase DOO79_17475 IPR036291 NAD(P)-binding domain superfamily DOO79_17480 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain DOO79_17480 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOO79_17480 IPR001279 Metallo-beta-lactamase DOO79_17480 IPR017782 Hydroxyacylglutathione hydrolase DOO79_17480 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain DOO79_17485 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DOO79_17485 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal DOO79_17485 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 DOO79_17485 IPR016039 Thiolase-like DOO79_17500 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase DOO79_17500 IPR004629 Glycosyl transferase WecB/TagA/CpsF DOO79_17515 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain DOO79_17525 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain DOO79_17525 IPR001296 Glycosyl transferase, family 1 DOO79_17545 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase DOO79_17545 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ DOO79_17545 IPR003362 Bacterial sugar transferase DOO79_17565 IPR000551 MerR-type HTH domain DOO79_17565 IPR009061 Putative DNA-binding domain superfamily DOO79_17570 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily DOO79_17570 IPR005684 Integration host factor, alpha subunit DOO79_17570 IPR000119 Histone-like DNA-binding protein DOO79_17570 IPR020816 Histone-like DNA-binding protein, conserved site DOO79_17575 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 DOO79_17575 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit DOO79_17575 IPR002547 tRNA-binding domain DOO79_17575 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain DOO79_17575 IPR005147 tRNA synthetase, B5-domain DOO79_17575 IPR012340 Nucleic acid-binding, OB-fold DOO79_17575 IPR005121 Ferrodoxin-fold anticodon-binding domain DOO79_17575 IPR009061 Putative DNA-binding domain superfamily DOO79_17575 IPR005146 B3/B4 tRNA-binding domain DOO79_17575 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain DOO79_17575 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily DOO79_17580 IPR006195 Aminoacyl-tRNA synthetase, class II DOO79_17580 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm DOO79_17580 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit DOO79_17580 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal DOO79_17580 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial DOO79_17580 IPR002319 Phenylalanyl-tRNA synthetase DOO79_17585 IPR035566 Ribosomal protein L20, C-terminal DOO79_17585 IPR005813 Ribosomal protein L20 DOO79_17590 IPR021137 Ribosomal protein L35 DOO79_17590 IPR018265 Ribosomal protein L35, conserved site DOO79_17590 IPR001706 Ribosomal protein L35, non-mitochondrial DOO79_17590 IPR037229 Ribosomal protein L35 superfamily DOO79_17595 IPR001288 Translation initiation factor 3 DOO79_17595 IPR019815 Translation initiation factor 3, C-terminal DOO79_17595 IPR019814 Translation initiation factor 3, N-terminal DOO79_17595 IPR019813 Translation initiation factor 3, conserved site DOO79_17595 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily DOO79_17595 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily DOO79_17600 IPR012676 TGS-like DOO79_17600 IPR006195 Aminoacyl-tRNA synthetase, class II DOO79_17600 IPR004154 Anticodon-binding DOO79_17600 IPR036621 Anticodon-binding domain superfamily DOO79_17600 IPR012675 Beta-grasp domain superfamily DOO79_17600 IPR004095 TGS DOO79_17600 IPR002320 Threonine-tRNA ligase, class IIa DOO79_17600 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) DOO79_17600 IPR033728 Threonine-tRNA ligase catalytic core domain DOO79_17600 IPR012947 Threonyl/alanyl tRNA synthetase, SAD DOO79_17600 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily DOO79_17605 IPR028082 Periplasmic binding protein-like I DOO79_17605 IPR000843 LacI-type HTH domain DOO79_17605 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOO79_17630 IPR023346 Lysozyme-like domain superfamily DOO79_17630 IPR008258 Transglycosylase SLT domain 1 DOO79_17650 IPR042217 Type IV secretion system, VirB10/TrbI DOO79_17650 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI DOO79_17670 IPR003688 Type IV secretion system protein TraG/VirD4 DOO79_17670 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_17685 IPR024759 UvrB, YAD/RRR-motif-containing domain DOO79_17685 IPR006935 Helicase/UvrB, N-terminal DOO79_17685 IPR036876 UVR domain superfamily DOO79_17685 IPR001943 UVR domain DOO79_17685 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_17685 IPR001650 Helicase, C-terminal DOO79_17685 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOO79_17685 IPR041471 UvrB, interaction domain DOO79_17685 IPR004807 UvrABC system, subunit B DOO79_17715 IPR008707 PilC beta-propeller domain DOO79_17715 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily DOO79_17735 IPR001082 Fimbrial protein pilin DOO79_17735 IPR012902 Prokaryotic N-terminal methylation site DOO79_17735 IPR000983 Bacterial general secretion pathway protein G-type pilin DOO79_17740 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal DOO79_17740 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily DOO79_17740 IPR031100 LOG family DOO79_17740 IPR021826 Domain of unknown function DUF3412 DOO79_17745 IPR039426 Vitamin B12 transporter BtuB-like DOO79_17745 IPR000531 TonB-dependent receptor-like, beta-barrel DOO79_17745 IPR013784 Carbohydrate-binding-like fold DOO79_17755 IPR002771 Multiple antibiotic resistance (MarC)-related DOO79_17765 IPR004480 Monothiol glutaredoxin-related DOO79_17765 IPR014434 Monothiol glutaredoxin DOO79_17765 IPR033658 Glutaredoxin, PICOT-like DOO79_17765 IPR002109 Glutaredoxin DOO79_17765 IPR036249 Thioredoxin-like superfamily DOO79_17770 IPR019833 Manganese/iron superoxide dismutase, binding site DOO79_17770 IPR019832 Manganese/iron superoxide dismutase, C-terminal DOO79_17770 IPR019831 Manganese/iron superoxide dismutase, N-terminal DOO79_17770 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily DOO79_17770 IPR001189 Manganese/iron superoxide dismutase DOO79_17770 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily DOO79_17775 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type DOO79_17775 IPR011761 ATP-grasp fold DOO79_17775 IPR013815 ATP-grasp fold, subdomain 1 DOO79_17775 IPR016185 Pre-ATP-grasp domain superfamily DOO79_17775 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit DOO79_17775 IPR011054 Rudiment single hybrid motif DOO79_17775 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain DOO79_17780 IPR035893 PurE domain superfamily DOO79_17780 IPR024694 PurE, prokaryotic type DOO79_17780 IPR000031 PurE domain DOO79_17780 IPR033747 Class I PurE DOO79_17790 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal DOO79_17790 IPR004393 Nicotinate-nucleotide pyrophosphorylase DOO79_17790 IPR013785 Aldolase-type TIM barrel DOO79_17790 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD DOO79_17790 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal DOO79_17790 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily DOO79_17790 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal DOO79_17800 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily DOO79_17800 IPR004088 K Homology domain, type 1 DOO79_17800 IPR036345 Exoribonuclease, PH domain 2 superfamily DOO79_17800 IPR015847 Exoribonuclease, phosphorolytic domain 2 DOO79_17800 IPR004087 K Homology domain DOO79_17800 IPR036612 K Homology domain, type 1 superfamily DOO79_17800 IPR022967 RNA-binding domain, S1 DOO79_17800 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain DOO79_17800 IPR027408 PNPase/RNase PH domain superfamily DOO79_17800 IPR012162 Polyribonucleotide nucleotidyltransferase DOO79_17800 IPR001247 Exoribonuclease, phosphorolytic domain 1 DOO79_17800 IPR020568 Ribosomal protein S5 domain 2-type fold DOO79_17800 IPR012340 Nucleic acid-binding, OB-fold DOO79_17800 IPR003029 S1 domain DOO79_17805 IPR000589 Ribosomal protein S15 DOO79_17805 IPR009068 S15/NS1, RNA-binding DOO79_17805 IPR005290 Ribosomal protein S15, bacterial-type DOO79_17810 IPR020103 Pseudouridine synthase, catalytic domain superfamily DOO79_17810 IPR002501 Pseudouridine synthase II, N-terminal DOO79_17810 IPR015947 PUA-like superfamily DOO79_17810 IPR014780 tRNA pseudouridine synthase II, TruB DOO79_17810 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal DOO79_17810 IPR032819 tRNA pseudouridylate synthase B, C-terminal DOO79_17815 IPR015946 K homology domain-like, alpha/beta DOO79_17815 IPR000238 Ribosome-binding factor A DOO79_17815 IPR023799 Ribosome-binding factor A domain superfamily DOO79_17815 IPR020053 Ribosome-binding factor A, conserved site DOO79_17820 IPR036925 Translation initiation factor IF-2, domain 3 superfamily DOO79_17820 IPR023115 Translation initiation factor IF- 2, domain 3 DOO79_17820 IPR015760 Translation initiation factor IF- 2 DOO79_17820 IPR000178 Translation initiation factor aIF-2, bacterial-like DOO79_17820 IPR000795 Transcription factor, GTP-binding domain DOO79_17820 IPR005225 Small GTP-binding protein domain DOO79_17820 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_17820 IPR006847 Translation initiation factor IF-2, N-terminal DOO79_17820 IPR013575 Initiation factor 2 associated domain, bacterial DOO79_17820 IPR009000 Translation protein, beta-barrel domain superfamily DOO79_17820 IPR009061 Putative DNA-binding domain superfamily DOO79_17825 IPR036555 NusA, N-terminal domain superfamily DOO79_17825 IPR030842 Transcription termination/antitermination protein NusA, bacterial DOO79_17825 IPR012340 Nucleic acid-binding, OB-fold DOO79_17825 IPR003029 S1 domain DOO79_17825 IPR013735 Transcription factor NusA, N-terminal DOO79_17825 IPR010214 Transcription termination factor NusA, C-terminal duplication DOO79_17825 IPR010213 Transcription termination factor NusA DOO79_17825 IPR009019 K homology domain superfamily, prokaryotic type DOO79_17825 IPR025249 KH domain, NusA-like DOO79_17825 IPR015946 K homology domain-like, alpha/beta DOO79_17825 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical DOO79_17825 IPR022967 RNA-binding domain, S1 DOO79_17830 IPR003728 Ribosome maturation factor RimP DOO79_17830 IPR035956 RimP, N-terminal domain superfamily DOO79_17830 IPR028989 Ribosome maturation factor RimP, N-terminal DOO79_17830 IPR028998 Ribosome maturation factor RimP, C-terminal DOO79_17830 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily DOO79_17840 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 DOO79_17840 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit DOO79_17845 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit DOO79_17845 IPR003918 NADH:ubiquinone oxidoreductase DOO79_17845 IPR010227 NADH-quinone oxidoreductase, chain M/4 DOO79_17845 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal DOO79_17850 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup DOO79_17850 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 DOO79_17850 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal DOO79_17850 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit DOO79_17855 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like DOO79_17855 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K DOO79_17860 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ DOO79_17860 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 DOO79_17865 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOO79_17865 IPR010226 NADH-quinone oxidoreductase, chain I DOO79_17865 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOO79_17870 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H DOO79_17870 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site DOO79_17875 IPR010228 NADH:ubiquinone oxidoreductase, subunit G DOO79_17875 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DOO79_17875 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal DOO79_17875 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding DOO79_17875 IPR036010 2Fe-2S ferredoxin-like superfamily DOO79_17875 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site DOO79_17875 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain DOO79_17875 IPR006656 Molybdopterin oxidoreductase DOO79_17880 IPR019554 Soluble ligand binding domain DOO79_17880 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily DOO79_17880 IPR011537 NADH ubiquinone oxidoreductase, F subunit DOO79_17880 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain DOO79_17880 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain DOO79_17880 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site DOO79_17880 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily DOO79_17885 IPR002023 NADH-quinone oxidoreductase subunit E-like DOO79_17885 IPR042128 NuoE domain DOO79_17885 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal DOO79_17885 IPR036249 Thioredoxin-like superfamily DOO79_17890 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H DOO79_17890 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily DOO79_17890 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site DOO79_17890 IPR029014 [NiFe]-hydrogenase, large subunit DOO79_17890 IPR001135 NADH-quinone oxidoreductase, subunit D DOO79_17895 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site DOO79_17895 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily DOO79_17895 IPR010218 NADH dehydrogenase, subunit C DOO79_17895 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit DOO79_17900 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit DOO79_17900 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit DOO79_17905 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 DOO79_17905 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid DOO79_17905 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily DOO79_17920 IPR013785 Aldolase-type TIM barrel DOO79_17920 IPR035990 Triosephosphate isomerase superfamily DOO79_17920 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic DOO79_17920 IPR000652 Triosephosphate isomerase DOO79_17920 IPR020861 Triosephosphate isomerase, active site DOO79_17925 IPR036291 NAD(P)-binding domain superfamily DOO79_17925 IPR002347 Short-chain dehydrogenase/reductase SDR DOO79_17925 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOO79_17940 IPR029787 Nucleotide cyclase DOO79_17940 IPR005330 MHYT domain DOO79_17940 IPR000160 GGDEF domain DOO79_17940 IPR035919 EAL domain superfamily DOO79_17940 IPR001633 EAL domain DOO79_17955 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily DOO79_17955 IPR016066 Alpha-D-phosphohexomutase, conserved site DOO79_17955 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III DOO79_17955 IPR005843 Alpha-D-phosphohexomutase, C-terminal DOO79_17955 IPR005841 Alpha-D-phosphohexomutase superfamily DOO79_17955 IPR006352 Phosphoglucosamine mutase, bacterial type DOO79_17955 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III DOO79_17955 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II DOO79_17955 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I DOO79_17960 IPR029045 ClpP/crotonase-like domain superfamily DOO79_17960 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit DOO79_17960 IPR034733 Acetyl-CoA carboxylase DOO79_17960 IPR041010 Acetyl-coA carboxylase zinc finger domain DOO79_17960 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal DOO79_17965 IPR013785 Aldolase-type TIM barrel DOO79_17965 IPR002028 Tryptophan synthase, alpha chain DOO79_17965 IPR018204 Tryptophan synthase, alpha chain, active site DOO79_17965 IPR011060 Ribulose-phosphate binding barrel DOO79_17975 IPR006653 Tryptophan synthase, beta chain, conserved site DOO79_17975 IPR001926 Pyridoxal-phosphate dependent enzyme DOO79_17975 IPR023026 Tryptophan synthase beta chain/beta chain-like DOO79_17975 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DOO79_17975 IPR006654 Tryptophan synthase, beta chain DOO79_17980 IPR037418 HTH-type transcriptional regulator TrpI, PBP2 DOO79_17980 IPR005119 LysR, substrate-binding DOO79_17980 IPR000847 Transcription regulator HTH, LysR DOO79_17980 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_17980 IPR036390 Winged helix DNA-binding domain superfamily DOO79_17985 IPR011060 Ribulose-phosphate binding barrel DOO79_17985 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) DOO79_17985 IPR013785 Aldolase-type TIM barrel DOO79_17990 IPR001406 Pseudouridine synthase I, TruA DOO79_17990 IPR020103 Pseudouridine synthase, catalytic domain superfamily DOO79_17990 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain DOO79_17990 IPR020095 Pseudouridine synthase I, TruA, C-terminal DOO79_18010 IPR012280 Semialdehyde dehydrogenase, dimerisation domain DOO79_18010 IPR000534 Semialdehyde dehydrogenase, NAD-binding DOO79_18010 IPR036291 NAD(P)-binding domain superfamily DOO79_18010 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type DOO79_18010 IPR012080 Aspartate-semialdehyde dehydrogenase DOO79_18015 IPR036291 NAD(P)-binding domain superfamily DOO79_18015 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain DOO79_18015 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DOO79_18015 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DOO79_18015 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DOO79_18020 IPR020541 Chorismate synthase, conserved site DOO79_18020 IPR000453 Chorismate synthase DOO79_18020 IPR035904 Chorismate synthase AroC superfamily DOO79_18025 IPR004556 Methyltransferase HemK-like DOO79_18025 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DOO79_18025 IPR007848 Methyltransferase small domain DOO79_18025 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase DOO79_18025 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOO79_18030 IPR036249 Thioredoxin-like superfamily DOO79_18030 IPR003782 Copper chaperone SCO1/SenC DOO79_18035 IPR003817 Phosphatidylserine decarboxylase-related DOO79_18035 IPR033177 Phosphatidylserine decarboxylase DOO79_18035 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 DOO79_18050 IPR033186 Helicase HerA-like C-terminal DOO79_18050 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_18055 IPR004385 Nucleoside diphosphate pyrophosphatase DOO79_18055 IPR015797 NUDIX hydrolase-like domain superfamily DOO79_18055 IPR000086 NUDIX hydrolase domain DOO79_18075 IPR028624 Transcription elongation factor GreA/GreB DOO79_18075 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily DOO79_18075 IPR018151 Transcription elongation factor, GreA/GreB, conserved site DOO79_18075 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal DOO79_18075 IPR023459 Transcription elongation factor GreA/GreB family DOO79_18075 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal DOO79_18075 IPR006358 Transcription elongation factor GreB DOO79_18075 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily DOO79_18080 IPR038135 Methylthiotransferase, N-terminal domain superfamily DOO79_18080 IPR020612 Methylthiotransferase, conserved site DOO79_18080 IPR005839 Methylthiotransferase DOO79_18080 IPR005840 Ribosomal protein S12 methylthiotransferase RimO DOO79_18080 IPR041582 RimO, TRAM domain DOO79_18080 IPR007197 Radical SAM DOO79_18080 IPR023404 Radical SAM, alpha/beta horseshoe DOO79_18080 IPR006638 Elp3/MiaB/NifB DOO79_18080 IPR002792 TRAM domain DOO79_18080 IPR013848 Methylthiotransferase, N-terminal DOO79_18090 IPR015927 Peptidase S24/S26A/S26B/S26C DOO79_18090 IPR006197 Peptidase S24, LexA-like DOO79_18090 IPR036286 LexA/Signal peptidase-like superfamily DOO79_18090 IPR039418 LexA-like DOO79_18095 IPR036775 DNA polymerase, Y-family, little finger domain superfamily DOO79_18095 IPR001126 UmuC domain DOO79_18095 IPR017961 DNA polymerase, Y-family, little finger domain DOO79_18095 IPR025188 Domain of unknown function DUF4113 DOO79_18095 IPR024728 DNA polymerase type-Y, HhH motif DOO79_18115 IPR001091 Restriction/modification DNA-methylase DOO79_18115 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOO79_18115 IPR002941 DNA methylase N-4/N-6 DOO79_18115 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DOO79_18125 IPR006430 Phage portal protein PBSX family DOO79_18125 IPR030935 Phage portal protein PBSX family, Proteobacteria DOO79_18170 IPR023346 Lysozyme-like domain superfamily DOO79_18170 IPR000726 Glycoside hydrolase, family 19, catalytic DOO79_18345 IPR002925 Dienelactone hydrolase DOO79_18345 IPR029058 Alpha/Beta hydrolase fold DOO79_18365 IPR033704 dUTPase, trimeric DOO79_18365 IPR036157 dUTPase-like superfamily DOO79_18365 IPR029054 dUTPase-like DOO79_18365 IPR011962 dCTP deaminase DOO79_18375 IPR000808 Mrp, conserved site DOO79_18375 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 DOO79_18375 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_18375 IPR019591 Mrp/NBP35 ATP-binding protein DOO79_18380 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DOO79_18380 IPR010917 TonB-dependent receptor, conserved site DOO79_18380 IPR037066 TonB-dependent receptor, plug domain superfamily DOO79_18380 IPR010916 TonB box, conserved site DOO79_18380 IPR000531 TonB-dependent receptor-like, beta-barrel DOO79_18380 IPR012910 TonB-dependent receptor, plug domain DOO79_18380 IPR039426 Vitamin B12 transporter BtuB-like DOO79_18380 IPR010101 TonB-dependent vitamin B12 transporter BtuB DOO79_18400 IPR007696 DNA mismatch repair protein MutS, core DOO79_18400 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_18400 IPR036678 MutS, connector domain superfamily DOO79_18400 IPR007860 DNA mismatch repair protein MutS, connector domain DOO79_18400 IPR036187 DNA mismatch repair protein MutS, core domain superfamily DOO79_18400 IPR005748 DNA mismatch repair protein MutS DOO79_18400 IPR007695 DNA mismatch repair protein MutS-like, N-terminal DOO79_18400 IPR000432 DNA mismatch repair protein MutS, C-terminal DOO79_18400 IPR007861 DNA mismatch repair protein MutS, clamp DOO79_18400 IPR016151 DNA mismatch repair protein MutS, N-terminal DOO79_18400 IPR017261 DNA mismatch repair protein MutS/MSH DOO79_18410 IPR000763 Catalase-peroxidase haem DOO79_18410 IPR002016 Haem peroxidase DOO79_18410 IPR010255 Haem peroxidase superfamily DOO79_18410 IPR019794 Peroxidase, active site DOO79_18410 IPR019793 Peroxidases heam-ligand binding site DOO79_18415 IPR025708 Heat shock protein 15 DOO79_18415 IPR036986 RNA-binding S4 domain superfamily DOO79_18415 IPR002942 RNA-binding S4 domain DOO79_18430 IPR002528 Multi antimicrobial extrusion protein DOO79_18435 IPR008991 Translation protein SH3-like domain superfamily DOO79_18435 IPR038657 Ribosomal protein L19 superfamily DOO79_18435 IPR001857 Ribosomal protein L19 DOO79_18435 IPR018257 Ribosomal protein L19, conserved site DOO79_18440 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain DOO79_18440 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DOO79_18440 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal DOO79_18440 IPR029028 Alpha/beta knot methyltransferases DOO79_18440 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria DOO79_18445 IPR002676 RimM, N-terminal DOO79_18445 IPR011033 PRC-barrel-like superfamily DOO79_18445 IPR027275 PRC-barrel domain DOO79_18445 IPR036976 RimM, N-terminal domain superfamily DOO79_18445 IPR009000 Translation protein, beta-barrel domain superfamily DOO79_18445 IPR011961 16S rRNA processing protein RimM DOO79_18450 IPR023803 Ribosomal protein S16 domain superfamily DOO79_18450 IPR020592 Ribosomal protein S16, conserved site DOO79_18450 IPR000307 Ribosomal protein S16 DOO79_18455 IPR018300 Aminotransferase, class IV, conserved site DOO79_18455 IPR005785 Branched-chain amino acid aminotransferase I DOO79_18455 IPR033939 Branched-chain aminotransferase DOO79_18455 IPR036038 Aminotransferase-like, PLP-dependent enzymes DOO79_18455 IPR001544 Aminotransferase class IV DOO79_18460 IPR013785 Aldolase-type TIM barrel DOO79_18460 IPR004136 Nitronate monooxygenase DOO79_18465 IPR013822 Signal recognition particle SRP54, helical bundle DOO79_18465 IPR004125 Signal recognition particle, SRP54 subunit, M-domain DOO79_18465 IPR004780 Signal recognition particle protein DOO79_18465 IPR022941 Signal recognition particle, SRP54 subunit DOO79_18465 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain DOO79_18465 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily DOO79_18465 IPR003593 AAA+ ATPase domain DOO79_18465 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_18465 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily DOO79_18470 IPR017562 Cytochrome c-type biogenesis protein CcsA DOO79_18470 IPR002541 Cytochrome c assembly protein DOO79_18475 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase DOO79_18475 IPR011013 Galactose mutarotase-like domain superfamily DOO79_18475 IPR014718 Glycoside hydrolase-type carbohydrate-binding DOO79_18475 IPR018052 Aldose 1-epimerase, conserved site DOO79_18475 IPR015443 Aldose 1-epimerase DOO79_18480 IPR013780 Glycosyl hydrolase, all-beta DOO79_18480 IPR010720 Alpha-L-arabinofuranosidase, C-terminal DOO79_18480 IPR017853 Glycoside hydrolase superfamily DOO79_18490 IPR001789 Signal transduction response regulator, receiver domain DOO79_18490 IPR011006 CheY-like superfamily DOO79_18510 IPR001789 Signal transduction response regulator, receiver domain DOO79_18510 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOO79_18510 IPR019247 Histidine kinase BarA, N-terminal DOO79_18510 IPR036641 HPT domain superfamily DOO79_18510 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_18510 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain DOO79_18510 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_18510 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_18510 IPR011006 CheY-like superfamily DOO79_18510 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_18510 IPR003660 HAMP domain DOO79_18510 IPR005467 Histidine kinase domain DOO79_18515 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOO79_18515 IPR000780 MCP methyltransferase, CheR-type DOO79_18515 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal DOO79_18515 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal DOO79_18520 IPR035909 Methylesterase CheB, C-terminal DOO79_18520 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase DOO79_18525 IPR038318 KdpD, transmembrane domain superfamily DOO79_18525 IPR003018 GAF domain DOO79_18525 IPR029016 GAF-like domain superfamily DOO79_18525 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_18525 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_18525 IPR005467 Histidine kinase domain DOO79_18525 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_18525 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOO79_18525 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal DOO79_18525 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_18525 IPR025201 Sensor protein KdpD, transmembrane domain DOO79_18530 IPR011008 Dimeric alpha-beta barrel DOO79_18530 IPR009874 Protein of unknown function DUF1428 DOO79_18535 IPR017937 Thioredoxin, conserved site DOO79_18535 IPR013766 Thioredoxin domain DOO79_18535 IPR036249 Thioredoxin-like superfamily DOO79_18535 IPR005746 Thioredoxin DOO79_18540 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DOO79_18540 IPR010105 TonB-dependent siderophore receptor DOO79_18540 IPR039426 Vitamin B12 transporter BtuB-like DOO79_18540 IPR000531 TonB-dependent receptor-like, beta-barrel DOO79_18540 IPR012910 TonB-dependent receptor, plug domain DOO79_18545 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily DOO79_18545 IPR041542 Beta-xylosidase, C-terminal Concanavalin A-like domain DOO79_18545 IPR006710 Glycoside hydrolase, family 43 DOO79_18545 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOO79_18555 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOO79_18555 IPR036641 HPT domain superfamily DOO79_18555 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_18555 IPR005467 Histidine kinase domain DOO79_18555 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_18555 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_18555 IPR003660 HAMP domain DOO79_18555 IPR011006 CheY-like superfamily DOO79_18555 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain DOO79_18555 IPR001789 Signal transduction response regulator, receiver domain DOO79_18555 IPR033414 Periplasmic sensor domain DOO79_18555 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_18565 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_18565 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_18570 IPR002645 STAS domain DOO79_18570 IPR036513 STAS domain superfamily DOO79_18575 IPR002645 STAS domain DOO79_18575 IPR036513 STAS domain superfamily DOO79_18575 IPR012292 Globin/Protoglobin DOO79_18575 IPR014792 RsbS co-antagonist protein RsbRA N-terminal domain DOO79_18585 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_18585 IPR020575 Heat shock protein Hsp90, N-terminal DOO79_18585 IPR020568 Ribosomal protein S5 domain 2-type fold DOO79_18585 IPR037196 HSP90, C-terminal domain DOO79_18585 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_18585 IPR001404 Heat shock protein Hsp90 family DOO79_18590 IPR018062 HTH domain AraC-type, conserved site DOO79_18590 IPR018060 DNA binding HTH domain, AraC-type DOO79_18600 IPR008523 Protein of unknown function DUF805 DOO79_18605 IPR020568 Ribosomal protein S5 domain 2-type fold DOO79_18605 IPR004504 DNA repair protein RadA DOO79_18605 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_18605 IPR041166 LapB, rubredoxin metal binding domain DOO79_18605 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain DOO79_18605 IPR003593 AAA+ ATPase domain DOO79_18605 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOO79_18615 IPR014210 Cytochrome o ubiquinol oxidase subunit IV DOO79_18615 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes DOO79_18620 IPR035973 Cytochrome c oxidase subunit III-like superfamily DOO79_18620 IPR024791 Cytochrome c oxidase subunit III DOO79_18620 IPR000298 Cytochrome c oxidase subunit III-like DOO79_18620 IPR033946 Ubiquinol oxidase subunit III domain DOO79_18620 IPR014206 Cytochrome o ubiquinol oxidase, subunit III DOO79_18620 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle DOO79_18625 IPR036927 Cytochrome c oxidase-like, subunit I superfamily DOO79_18625 IPR000883 Cytochrome c oxidase subunit I DOO79_18625 IPR014207 Cytochrome o ubiquinol oxidase, subunit I DOO79_18625 IPR023616 Cytochrome c oxidase-like, subunit I domain DOO79_18625 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site DOO79_18630 IPR006333 Cytochrome o ubiquinol oxidase subunit II DOO79_18630 IPR002429 Cytochrome c oxidase subunit II-like C-terminal DOO79_18630 IPR010514 COX aromatic rich motif DOO79_18630 IPR008972 Cupredoxin DOO79_18630 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain DOO79_18630 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain DOO79_18630 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily DOO79_18640 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase DOO79_18645 IPR001872 Peptidase A8, signal peptidase II DOO79_18650 IPR002301 Isoleucine-tRNA ligase DOO79_18650 IPR023585 Isoleucine-tRNA ligase, type 1 DOO79_18650 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding DOO79_18650 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain DOO79_18650 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding DOO79_18650 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain DOO79_18650 IPR002300 Aminoacyl-tRNA synthetase, class Ia DOO79_18650 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DOO79_18650 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOO79_18650 IPR010663 Zinc finger, FPG/IleRS-type DOO79_18655 IPR015864 FAD synthetase DOO79_18655 IPR023468 Riboflavin kinase DOO79_18655 IPR002606 Riboflavin kinase, bacterial DOO79_18655 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic DOO79_18655 IPR023465 Riboflavin kinase domain superfamily DOO79_18655 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOO79_18660 IPR004268 Peptidoglycan biosynthesis protein MurJ DOO79_18665 IPR002583 Ribosomal protein S20 DOO79_18665 IPR036510 Ribosomal protein S20 superfamily DOO79_18670 IPR035101 GTP-binding protein, Obg-type DOO79_18670 IPR006073 GTP binding domain DOO79_18670 IPR006169 GTP1/OBG domain DOO79_18670 IPR006074 GTP1/OBG, conserved site DOO79_18670 IPR014100 GTP-binding protein Obg/CgtA DOO79_18670 IPR036726 GTP1/OBG domain superfamily DOO79_18670 IPR031167 OBG-type guanine nucleotide-binding (G) domain DOO79_18670 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_18675 IPR018261 Ribosomal protein L27, conserved site DOO79_18675 IPR001684 Ribosomal protein L27 DOO79_18680 IPR001787 Ribosomal protein L21 DOO79_18680 IPR028909 Ribosomal protein L21-like DOO79_18680 IPR036164 L21-like superfamily DOO79_18680 IPR018258 Ribosomal protein L21, conserved site DOO79_18685 IPR003439 ABC transporter-like DOO79_18685 IPR004602 UvrABC system subunit A DOO79_18685 IPR041102 UvrA, interaction domain DOO79_18685 IPR041552 UvrA DNA-binding domain DOO79_18685 IPR017871 ABC transporter, conserved site DOO79_18685 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_18690 IPR029069 HotDog domain superfamily DOO79_18690 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family DOO79_18700 IPR001753 Enoyl-CoA hydratase/isomerase DOO79_18700 IPR029045 ClpP/crotonase-like domain superfamily DOO79_18740 IPR007471 N-end aminoacyl transferase, N-terminal DOO79_18740 IPR030700 N-end rule aminoacyl transferase DOO79_18740 IPR007472 N-end rule aminoacyl transferase, C-terminal DOO79_18740 IPR016181 Acyl-CoA N-acyltransferase DOO79_18740 IPR017138 Aspartate/glutamate leucyltransferase DOO79_18750 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase DOO79_18750 IPR016185 Pre-ATP-grasp domain superfamily DOO79_18750 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type DOO79_18750 IPR011761 ATP-grasp fold DOO79_18750 IPR011054 Rudiment single hybrid motif DOO79_18750 IPR013815 ATP-grasp fold, subdomain 1 DOO79_18780 IPR011257 DNA glycosylase DOO79_18780 IPR003265 HhH-GPD domain DOO79_18795 IPR000792 Transcription regulator LuxR, C-terminal DOO79_18795 IPR001789 Signal transduction response regulator, receiver domain DOO79_18795 IPR011006 CheY-like superfamily DOO79_18795 IPR016032 Signal transduction response regulator, C-terminal effector DOO79_18800 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_18800 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_18800 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain DOO79_18815 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal DOO79_18815 IPR013033 Septum formation inhibitor MinC DOO79_18815 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily DOO79_18815 IPR007874 Septum formation inhibitor MinC, N-terminal DOO79_18815 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily DOO79_18815 IPR005526 Septum formation inhibitor MinC, C-terminal DOO79_18820 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain DOO79_18820 IPR010223 ATP binding protein MinD, bacterial-type DOO79_18820 IPR025501 ATP binding protein MinD DOO79_18820 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_18825 IPR036707 Cell division topological specificity factor MinE superfamily DOO79_18825 IPR005527 Cell division topological specificity factor MinE DOO79_18835 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_18835 IPR005467 Histidine kinase domain DOO79_18835 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOO79_18835 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_18835 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_18835 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_18835 IPR003660 HAMP domain DOO79_18835 IPR013727 Two-component sensor kinase, N-terminal DOO79_18840 IPR039420 Transcriptional regulatory protein WalR-like DOO79_18840 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_18840 IPR001789 Signal transduction response regulator, receiver domain DOO79_18840 IPR001867 OmpR/PhoB-type DNA-binding domain DOO79_18840 IPR011006 CheY-like superfamily DOO79_18855 IPR017850 Alkaline-phosphatase-like, core domain superfamily DOO79_18855 IPR012549 Phosphoethanolamine transferase, N-terminal DOO79_18855 IPR040423 Phosphoethanolamine transferase DOO79_18855 IPR000917 Sulfatase, N-terminal DOO79_18870 IPR020846 Major facilitator superfamily domain DOO79_18870 IPR011701 Major facilitator superfamily DOO79_18870 IPR036259 MFS transporter superfamily DOO79_18870 IPR004734 Multidrug resistance protein DOO79_18870 IPR004812 Drug resistance transporter Bcr/CmlA subfamily DOO79_18875 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOO79_18875 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOO79_18875 IPR015424 Pyridoxal phosphate-dependent transferase DOO79_18875 IPR020581 Glycine cleavage system P protein DOO79_18875 IPR003437 Glycine dehydrogenase (decarboxylating) DOO79_18880 IPR019826 Carboxylesterase type B, active site DOO79_18880 IPR002018 Carboxylesterase, type B DOO79_18880 IPR029058 Alpha/Beta hydrolase fold DOO79_18885 IPR036812 NADP-dependent oxidoreductase domain superfamily DOO79_18885 IPR020471 Aldo/keto reductase DOO79_18885 IPR023210 NADP-dependent oxidoreductase domain DOO79_18890 IPR010582 Catalase immune-responsive domain DOO79_18890 IPR018028 Catalase, mono-functional, haem-containing DOO79_18890 IPR020835 Catalase superfamily DOO79_18890 IPR024708 Catalase active site DOO79_18890 IPR024712 Catalase, mono-functional, haem-containing, clade 2 DOO79_18890 IPR041399 Large catalase, C-terminal domain DOO79_18890 IPR011614 Catalase core domain DOO79_18890 IPR037060 Catalase core domain superfamily DOO79_18890 IPR002226 Catalase haem-binding site DOO79_18890 IPR029062 Class I glutamine amidotransferase-like DOO79_18915 IPR009057 Homeobox-like domain superfamily DOO79_18915 IPR037923 Transcription regulator HTH-like DOO79_18915 IPR018060 DNA binding HTH domain, AraC-type DOO79_18915 IPR014710 RmlC-like jelly roll fold DOO79_18915 IPR003313 AraC-type arabinose-binding/dimerisation domain DOO79_18955 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_18955 IPR017871 ABC transporter, conserved site DOO79_18955 IPR041552 UvrA DNA-binding domain DOO79_18975 IPR005982 Thioredoxin reductase DOO79_18975 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site DOO79_18975 IPR023753 FAD/NAD(P)-binding domain DOO79_18975 IPR036188 FAD/NAD(P)-binding domain superfamily DOO79_18985 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOO79_18985 IPR002347 Short-chain dehydrogenase/reductase SDR DOO79_18985 IPR036291 NAD(P)-binding domain superfamily DOO79_18990 IPR041371 Glycosyl hydrolase family 92 N-terminal domain DOO79_18990 IPR012939 Glycosyl hydrolase family 92 DOO79_18990 IPR008928 Six-hairpin glycosidase superfamily DOO79_18990 IPR014718 Glycoside hydrolase-type carbohydrate-binding DOO79_18990 IPR005887 Alpha-1,2-mannosidase, putative DOO79_19000 IPR036291 NAD(P)-binding domain superfamily DOO79_19000 IPR002347 Short-chain dehydrogenase/reductase SDR DOO79_19000 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOO79_19005 IPR011613 GH15-like domain DOO79_19005 IPR008928 Six-hairpin glycosidase superfamily DOO79_19005 IPR012341 Six-hairpin glycosidase-like superfamily DOO79_19015 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase DOO79_19015 IPR029056 Ribokinase-like DOO79_19020 IPR013078 Histidine phosphatase superfamily, clade-1 DOO79_19020 IPR012337 Ribonuclease H-like superfamily DOO79_19020 IPR036397 Ribonuclease H superfamily DOO79_19020 IPR014636 RNase H, phosphoglycerate mutase domain-containing DOO79_19020 IPR029033 Histidine phosphatase superfamily DOO79_19020 IPR002156 Ribonuclease H domain DOO79_19055 IPR013670 EcoEI R protein C-terminal domain DOO79_19055 IPR006935 Helicase/UvrB, N-terminal DOO79_19055 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOO79_19055 IPR001650 Helicase, C-terminal DOO79_19055 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_19055 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal DOO79_19065 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DOO79_19065 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOO79_19065 IPR003356 DNA methylase, adenine-specific DOO79_19065 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily DOO79_19075 IPR008490 Transposase InsH, N-terminal DOO79_19080 IPR000055 Restriction endonuclease, type I, HsdS DOO79_19110 IPR009057 Homeobox-like domain superfamily DOO79_19110 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOO79_19110 IPR001647 DNA-binding HTH domain, TetR-type DOO79_19110 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DOO79_19115 IPR036291 NAD(P)-binding domain superfamily DOO79_19115 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOO79_19115 IPR002347 Short-chain dehydrogenase/reductase SDR DOO79_19120 IPR042097 Aminopeptidase N-like , N-terminal DOO79_19120 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase DOO79_19120 IPR024571 ERAP1-like C-terminal domain DOO79_19120 IPR014782 Peptidase M1, membrane alanine aminopeptidase DOO79_19120 IPR034016 Aminopeptidase N-type DOO79_19125 IPR018220 Adenylosuccinate synthase, GTP-binding site DOO79_19125 IPR033128 Adenylosuccinate synthase, active site DOO79_19125 IPR042109 Adenylosuccinate synthetase, domain 1 DOO79_19125 IPR042110 Adenylosuccinate synthetase, domain 2 DOO79_19125 IPR042111 Adenylosuccinate synthetase, domain 3 DOO79_19125 IPR001114 Adenylosuccinate synthetase DOO79_19125 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_19135 IPR036013 Band 7/SPFH domain superfamily DOO79_19135 IPR001107 Band 7 domain DOO79_19135 IPR010200 HflC DOO79_19140 IPR010201 HflK DOO79_19140 IPR001107 Band 7 domain DOO79_19140 IPR036013 Band 7/SPFH domain superfamily DOO79_19140 IPR001972 Stomatin family DOO79_19140 IPR020980 Menbrane protein HflK, N-terminal DOO79_19145 IPR011006 CheY-like superfamily DOO79_19145 IPR001789 Signal transduction response regulator, receiver domain DOO79_19150 IPR002939 Chaperone DnaJ, C-terminal DOO79_19150 IPR036869 Chaperone J-domain superfamily DOO79_19150 IPR018253 DnaJ domain, conserved site DOO79_19150 IPR001623 DnaJ domain DOO79_19150 IPR023859 DNA-binding protein, curved-DNA DOO79_19150 IPR008971 HSP40/DnaJ peptide-binding DOO79_19160 IPR013766 Thioredoxin domain DOO79_19160 IPR036249 Thioredoxin-like superfamily DOO79_19160 IPR013740 Redoxin DOO79_19160 IPR037944 Peroxiredoxin-5-like DOO79_19170 IPR001460 Penicillin-binding protein, transpeptidase DOO79_19170 IPR023346 Lysozyme-like domain superfamily DOO79_19170 IPR001264 Glycosyl transferase, family 51 DOO79_19170 IPR011815 Penicillin-binding protein 1C DOO79_19170 IPR036950 Penicillin binding protein transglycosylase domain DOO79_19170 IPR009647 Penicillin-binding, C-terminal DOO79_19170 IPR012338 Beta-lactamase/transpeptidase-like DOO79_19190 IPR026284 Alpha-2-macroglobulin, bacteria DOO79_19190 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid DOO79_19190 IPR002890 Macroglobulin domain DOO79_19190 IPR001599 Alpha-2-macroglobulin DOO79_19190 IPR041246 Bacterial alpha-2-macroglobulin MG10 domain DOO79_19190 IPR041462 Bacterial Alpha-2-macroglobulin, MG6 domain DOO79_19190 IPR041203 Bacterial Alpha-2-macroglobulin, MG5 domain DOO79_19190 IPR040639 Alpha-2-macroglobulin, MG1 domain DOO79_19190 IPR011625 Alpha-2-macroglobulin, bait region domain DOO79_19190 IPR021868 Alpha-2-macroglobulin MG3 domain DOO79_19205 IPR039426 Vitamin B12 transporter BtuB-like DOO79_19205 IPR010105 TonB-dependent siderophore receptor DOO79_19205 IPR000531 TonB-dependent receptor-like, beta-barrel DOO79_19205 IPR012910 TonB-dependent receptor, plug domain DOO79_19205 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DOO79_19210 IPR007400 PrpF protein DOO79_19210 IPR012709 2-methyl-aconitate isomerase PrpF DOO79_19225 IPR022789 Antitoxin ParD DOO79_19225 IPR010985 Ribbon-helix-helix DOO79_19225 IPR038296 Antitoxin ParD superfamily DOO79_19230 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent DOO79_19230 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain DOO79_19230 IPR036008 Aconitase, iron-sulfur domain DOO79_19230 IPR006249 Aconitase/Iron-responsive element-binding protein 2 DOO79_19230 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 DOO79_19230 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain DOO79_19230 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel DOO79_19235 IPR016143 Citrate synthase-like, small alpha subdomain DOO79_19235 IPR024176 Citrate synthase, bacterial-type DOO79_19235 IPR036969 Citrate synthase superfamily DOO79_19235 IPR002020 Citrate synthase DOO79_19235 IPR016142 Citrate synthase-like, large alpha subdomain DOO79_19235 IPR011278 2-methylcitrate synthase/citrate synthase type I DOO79_19235 IPR019810 Citrate synthase active site DOO79_19240 IPR040442 Pyruvate kinase-like domain superfamily DOO79_19240 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DOO79_19240 IPR012695 2-methylisocitrate lyase DOO79_19240 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site DOO79_19240 IPR039556 ICL/PEPM domain DOO79_19245 IPR002197 DNA binding HTH domain, Fis-type DOO79_19245 IPR003593 AAA+ ATPase domain DOO79_19245 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_19245 IPR012704 Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR DOO79_19245 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal DOO79_19245 IPR002078 RNA polymerase sigma factor 54 interaction domain DOO79_19245 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DOO79_19245 IPR009057 Homeobox-like domain superfamily DOO79_19245 IPR025944 Sigma-54 interaction domain, conserved site DOO79_19265 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_19265 IPR015199 DNA polymerase III, delta subunit, C-terminal DOO79_19265 IPR004622 DNA polymerase III, delta prime subunit DOO79_19270 IPR003770 Endolytic murein transglycosylase DOO79_19275 IPR015890 Chorismate-utilising enzyme, C-terminal DOO79_19275 IPR019999 Anthranilate synthase component I-like DOO79_19275 IPR010118 Para-aminobenzoate synthase/anthranilate synthase, component I DOO79_19275 IPR005801 ADC synthase DOO79_19275 IPR006805 Anthranilate synthase component I, N-terminal DOO79_19280 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 DOO79_19280 IPR014030 Beta-ketoacyl synthase, N-terminal DOO79_19280 IPR016039 Thiolase-like DOO79_19280 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DOO79_19280 IPR014031 Beta-ketoacyl synthase, C-terminal DOO79_19280 IPR018201 Beta-ketoacyl synthase, active site DOO79_19280 IPR000794 Beta-ketoacyl synthase DOO79_19285 IPR009081 Phosphopantetheine binding ACP domain DOO79_19285 IPR003231 Acyl carrier protein (ACP) DOO79_19285 IPR006162 Phosphopantetheine attachment site DOO79_19285 IPR036736 ACP-like superfamily DOO79_19290 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase DOO79_19290 IPR036291 NAD(P)-binding domain superfamily DOO79_19290 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOO79_19290 IPR002347 Short-chain dehydrogenase/reductase SDR DOO79_19295 IPR001227 Acyl transferase domain superfamily DOO79_19295 IPR014043 Acyl transferase DOO79_19295 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DOO79_19295 IPR024925 Malonyl CoA-acyl carrier protein transacylase DOO79_19295 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type DOO79_19295 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding DOO79_19305 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DOO79_19305 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal DOO79_19305 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 DOO79_19305 IPR016039 Thiolase-like DOO79_19310 IPR002677 Ribosomal protein L32p DOO79_19310 IPR011332 Zinc-binding ribosomal protein DOO79_19315 IPR003772 Large ribosomal RNA subunit accumulation protein YceD DOO79_19315 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria DOO79_19320 IPR029001 Inosine triphosphate pyrophosphatase-like DOO79_19320 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein DOO79_19350 IPR011703 ATPase, AAA-3 DOO79_19350 IPR041628 ChlI/MoxR, AAA lid domain DOO79_19350 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_19360 IPR002931 Transglutaminase-like DOO79_19360 IPR025403 Domain of unknown function DUF4129 DOO79_19360 IPR021878 Protein-glutamine gamma-glutamyltransferase TgpA, N-terminal DOO79_19360 IPR038765 Papain-like cysteine peptidase superfamily DOO79_19370 IPR036265 HIT-like superfamily DOO79_19370 IPR001310 Histidine triad (HIT) protein DOO79_19370 IPR011146 HIT-like domain DOO79_19370 IPR019808 Histidine triad, conserved site DOO79_19375 IPR034137 RecR, TOPRIM domain DOO79_19375 IPR006171 TOPRIM domain DOO79_19375 IPR000093 DNA recombination protein RecR DOO79_19375 IPR023627 Recombination protein RecR DOO79_19375 IPR023628 Recombination protein RecR, C4-type zinc finger DOO79_19375 IPR015967 Recombination protein RecR, conserved site DOO79_19380 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily DOO79_19380 IPR004401 Nucleoid-associated protein YbaB/EbfC family DOO79_19385 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily DOO79_19385 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_19385 IPR021029 DNA polymerase III, tau subunit, domain V DOO79_19385 IPR012763 DNA polymerase III, subunit gamma/ tau DOO79_19385 IPR022754 DNA polymerase III, gamma subunit, domain III DOO79_19385 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV DOO79_19385 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal DOO79_19385 IPR003593 AAA+ ATPase domain DOO79_19385 IPR001270 ClpA/B family DOO79_19400 IPR003448 Molybdopterin biosynthesis MoaE DOO79_19400 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily DOO79_19405 IPR003749 Sulfur carrier ThiS/MoaD-like DOO79_19405 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp DOO79_19405 IPR012675 Beta-grasp domain superfamily DOO79_19410 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain DOO79_19410 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily DOO79_19410 IPR023045 Molybdenum cofactor biosynthesis C DOO79_19415 IPR010505 Molybdenum cofactor synthesis C-terminal DOO79_19415 IPR013785 Aldolase-type TIM barrel DOO79_19415 IPR006638 Elp3/MiaB/NifB DOO79_19415 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site DOO79_19415 IPR013483 Molybdenum cofactor biosynthesis protein A DOO79_19415 IPR007197 Radical SAM DOO79_19420 IPR013471 Ribonuclease Z/BN DOO79_19420 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOO79_19420 IPR001279 Metallo-beta-lactamase DOO79_19425 IPR022826 3-deoxy-D-manno-octulosonic acid kinase DOO79_19425 IPR011009 Protein kinase-like domain superfamily DOO79_19430 IPR002201 Glycosyl transferase, family 9 DOO79_19445 IPR015655 Protein phosphatase 2C family DOO79_19445 IPR001932 PPM-type phosphatase domain DOO79_19445 IPR036457 PPM-type phosphatase domain superfamily DOO79_19450 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain DOO79_19450 IPR006309 DNA polymerase 3, epsilon subunit DOO79_19450 IPR013520 Exonuclease, RNase T/DNA polymerase III DOO79_19450 IPR012337 Ribonuclease H-like superfamily DOO79_19450 IPR036397 Ribonuclease H superfamily DOO79_19455 IPR022892 Ribonuclease HI DOO79_19455 IPR012337 Ribonuclease H-like superfamily DOO79_19455 IPR036397 Ribonuclease H superfamily DOO79_19455 IPR002156 Ribonuclease H domain DOO79_19465 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain DOO79_19465 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain DOO79_19465 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOO79_19465 IPR001279 Metallo-beta-lactamase DOO79_19465 IPR017782 Hydroxyacylglutathione hydrolase DOO79_19470 IPR038765 Papain-like cysteine peptidase superfamily DOO79_19470 IPR036779 LysM domain superfamily DOO79_19470 IPR007921 CHAP domain DOO79_19470 IPR018392 LysM domain DOO79_19475 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site DOO79_19475 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type DOO79_19490 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily DOO79_19490 IPR020816 Histone-like DNA-binding protein, conserved site DOO79_19490 IPR000119 Histone-like DNA-binding protein DOO79_19495 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_19495 IPR003593 AAA+ ATPase domain DOO79_19495 IPR015947 PUA-like superfamily DOO79_19495 IPR027065 Lon protease DOO79_19495 IPR008269 Peptidase S16, Lon proteolytic domain DOO79_19495 IPR004815 Lon protease, bacterial/eukaryotic-type DOO79_19495 IPR027543 Lon protease, bacterial DOO79_19495 IPR003959 ATPase, AAA-type, core DOO79_19495 IPR008268 Peptidase S16, active site DOO79_19495 IPR003111 Lon, substrate-binding domain DOO79_19495 IPR020568 Ribosomal protein S5 domain 2-type fold DOO79_19495 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOO79_19500 IPR003959 ATPase, AAA-type, core DOO79_19500 IPR003593 AAA+ ATPase domain DOO79_19500 IPR038366 Zinc finger, ClpX C4-type superfamily DOO79_19500 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_19500 IPR019489 Clp ATPase, C-terminal DOO79_19500 IPR010603 Zinc finger, ClpX C4-type DOO79_19500 IPR004487 Clp protease, ATP-binding subunit ClpX DOO79_19505 IPR018215 ClpP, Ser active site DOO79_19505 IPR029045 ClpP/crotonase-like domain superfamily DOO79_19505 IPR033135 ClpP, histidine active site DOO79_19505 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA DOO79_19505 IPR001907 ATP-dependent Clp protease proteolytic subunit DOO79_19510 IPR027304 Trigger factor/SurA domain superfamily DOO79_19510 IPR037041 Trigger factor, C-terminal domain superfamily DOO79_19510 IPR008881 Trigger factor, ribosome-binding, bacterial DOO79_19510 IPR036611 Trigger factor ribosome-binding domain superfamily DOO79_19510 IPR005215 Trigger factor DOO79_19510 IPR008880 Trigger factor, C-terminal DOO79_19520 IPR005467 Histidine kinase domain DOO79_19520 IPR035965 PAS domain superfamily DOO79_19520 IPR013767 PAS fold DOO79_19520 IPR003660 HAMP domain DOO79_19520 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_19520 IPR000014 PAS domain DOO79_19520 IPR000700 PAS-associated, C-terminal DOO79_19520 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_19520 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_19520 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOO79_19520 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_19550 IPR024084 Isopropylmalate dehydrogenase-like domain DOO79_19560 IPR036249 Thioredoxin-like superfamily DOO79_19560 IPR011900 Glutaredoxin, GrxC DOO79_19560 IPR014025 Glutaredoxin subgroup DOO79_19560 IPR011767 Glutaredoxin active site DOO79_19560 IPR002109 Glutaredoxin DOO79_19565 IPR011990 Tetratricopeptide-like helical domain superfamily DOO79_19565 IPR013026 Tetratricopeptide repeat-containing domain DOO79_19565 IPR001915 Peptidase M48 DOO79_19565 IPR019734 Tetratricopeptide repeat DOO79_19565 IPR030873 Beta-barrel assembly-enhancing protease DOO79_19570 IPR001867 OmpR/PhoB-type DNA-binding domain DOO79_19570 IPR016032 Signal transduction response regulator, C-terminal effector DOO79_19570 IPR011006 CheY-like superfamily DOO79_19570 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB DOO79_19570 IPR001789 Signal transduction response regulator, receiver domain DOO79_19570 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_19570 IPR039420 Transcriptional regulatory protein WalR-like DOO79_19575 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_19575 IPR005467 Histidine kinase domain DOO79_19575 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOO79_19575 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_19575 IPR000014 PAS domain DOO79_19575 IPR035965 PAS domain superfamily DOO79_19575 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_19575 IPR013767 PAS fold DOO79_19575 IPR021766 Phosphate regulon sensor protein PhoR DOO79_19575 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_19575 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR DOO79_19580 IPR024953 Polyphosphate kinase middle domain DOO79_19580 IPR025200 Polyphosphate kinase C-terminal domain 2 DOO79_19580 IPR036830 Polyphosphate kinase middle domain superfamily DOO79_19580 IPR041108 Polyphosphate kinase, C-terminal domain 1 DOO79_19580 IPR025198 Polyphosphate kinase N-terminal domain DOO79_19580 IPR036832 Polyphosphate kinase N-terminal domain superfamily DOO79_19580 IPR003414 Polyphosphate kinase DOO79_19585 IPR003695 Ppx/GppA phosphatase DOO79_19585 IPR030673 Pyrophosphatase, GppA/Ppx-type DOO79_19585 IPR022371 Exopolyphosphatase DOO79_19590 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain DOO79_19590 IPR001296 Glycosyl transferase, family 1 DOO79_19595 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DOO79_19595 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily DOO79_19600 IPR029052 Metallo-dependent phosphatase-like DOO79_19600 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type DOO79_19600 IPR010138 UDP-2,3-diacylglucosamine hydrolase DOO79_19620 IPR009078 Ferritin-like superfamily DOO79_19620 IPR011197 Uncharacterised conserved protein UCP012318 DOO79_19620 IPR007402 Protein of unknown function DUF455 DOO79_19625 IPR029057 Phosphoribosyltransferase-like DOO79_19625 IPR017932 Glutamine amidotransferase type 2 domain DOO79_19625 IPR005854 Amidophosphoribosyltransferase DOO79_19625 IPR035584 Amidophosphoribosyltransferase, N-terminal DOO79_19625 IPR029055 Nucleophile aminohydrolases, N-terminal DOO79_19625 IPR000836 Phosphoribosyltransferase domain DOO79_19640 IPR013221 Mur ligase, central DOO79_19640 IPR004101 Mur ligase, C-terminal DOO79_19640 IPR036615 Mur ligase, C-terminal domain superfamily DOO79_19640 IPR036565 Mur-like, catalytic domain superfamily DOO79_19640 IPR018109 Folylpolyglutamate synthetase, conserved site DOO79_19640 IPR001645 Folylpolyglutamate synthetase DOO79_19650 IPR029033 Histidine phosphatase superfamily DOO79_19650 IPR013078 Histidine phosphatase superfamily, clade-1 DOO79_19655 IPR019500 Peptidase S46 DOO79_19655 IPR009003 Peptidase S1, PA clan DOO79_19685 IPR036291 NAD(P)-binding domain superfamily DOO79_19685 IPR020843 Polyketide synthase, enoylreductase domain DOO79_19685 IPR013154 Alcohol dehydrogenase, N-terminal DOO79_19685 IPR011032 GroES-like superfamily DOO79_19685 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site DOO79_19685 IPR013149 Alcohol dehydrogenase, C-terminal DOO79_19685 IPR004627 L-threonine 3-dehydrogenase DOO79_19695 IPR003593 AAA+ ATPase domain DOO79_19695 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal DOO79_19695 IPR003439 ABC transporter-like DOO79_19695 IPR017871 ABC transporter, conserved site DOO79_19695 IPR008995 Molybdate/tungstate binding, C-terminal DOO79_19695 IPR041193 CysA, C-terminal regulatory domain DOO79_19695 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_19695 IPR005666 Sulphate transport system permease protein 1 DOO79_19695 IPR024765 TOBE-like domain DOO79_19700 IPR005667 Sulphate ABC transporter permease protein 2 DOO79_19700 IPR035906 MetI-like superfamily DOO79_19700 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOO79_19700 IPR011866 Sulphate ABC transporter, permease protein CysW DOO79_19705 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOO79_19705 IPR011865 Sulphate ABC transporter, permease protein CysT DOO79_19705 IPR035906 MetI-like superfamily DOO79_19705 IPR005667 Sulphate ABC transporter permease protein 2 DOO79_19710 IPR005669 Thiosulphate/Sulfate-binding protein DOO79_19710 IPR000957 Sulphate/thiosulphate-binding, conserved site DOO79_19710 IPR034408 Sulphate/thiosulphate-binding site DOO79_19715 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOO79_19715 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site DOO79_19715 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOO79_19715 IPR004839 Aminotransferase, class I/classII DOO79_19715 IPR015424 Pyridoxal phosphate-dependent transferase DOO79_19715 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase DOO79_19725 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain DOO79_19725 IPR020103 Pseudouridine synthase, catalytic domain superfamily DOO79_19725 IPR006145 Pseudouridine synthase, RsuA/RluA DOO79_19725 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F DOO79_19725 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site DOO79_19735 IPR006690 Outer membrane protein, OmpA-like, conserved site DOO79_19735 IPR008722 Outer membrane porin F, N-terminal DOO79_19735 IPR006665 OmpA-like domain DOO79_19735 IPR036737 OmpA-like domain superfamily DOO79_19735 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DOO79_19735 IPR028974 TSP type-3 repeat DOO79_19735 IPR006664 Outer membrane protein, bacterial DOO79_19750 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal DOO79_19750 IPR013785 Aldolase-type TIM barrel DOO79_19750 IPR023753 FAD/NAD(P)-binding domain DOO79_19750 IPR036188 FAD/NAD(P)-binding domain superfamily DOO79_19770 IPR036249 Thioredoxin-like superfamily DOO79_19770 IPR004046 Glutathione S-transferase, C-terminal DOO79_19770 IPR004045 Glutathione S-transferase, N-terminal DOO79_19770 IPR040079 Glutathione Transferase family DOO79_19770 IPR010987 Glutathione S-transferase, C-terminal-like DOO79_19770 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DOO79_19780 IPR022383 Lactate/malate dehydrogenase, C-terminal DOO79_19780 IPR001557 L-lactate/malate dehydrogenase DOO79_19780 IPR001236 Lactate/malate dehydrogenase, N-terminal DOO79_19780 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal DOO79_19780 IPR010945 Malate dehydrogenase, type 2 DOO79_19780 IPR036291 NAD(P)-binding domain superfamily DOO79_19785 IPR029000 Cyclophilin-like domain superfamily DOO79_19785 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site DOO79_19785 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain DOO79_19800 IPR020556 Amidase, conserved site DOO79_19800 IPR023631 Amidase signature domain DOO79_19800 IPR036928 Amidase signature (AS) superfamily DOO79_19800 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit DOO79_19800 IPR000120 Amidase DOO79_19810 IPR013785 Aldolase-type TIM barrel DOO79_19810 IPR002480 DAHP synthetase, class II DOO79_19830 IPR003752 Disulphide bond formation protein DsbB/BdbC DOO79_19830 IPR023380 DsbB-like superfamily DOO79_19830 IPR022920 Disulphide bond formation protein DsbB DOO79_19835 IPR036373 Ribosomal protein L17 superfamily DOO79_19835 IPR000456 Ribosomal protein L17 DOO79_19840 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type DOO79_19840 IPR036643 DNA-directed RNA polymerase, insert domain superfamily DOO79_19840 IPR011773 DNA-directed RNA polymerase, alpha subunit DOO79_19840 IPR011262 DNA-directed RNA polymerase, insert domain DOO79_19840 IPR011260 RNA polymerase, alpha subunit, C-terminal DOO79_19840 IPR036603 RNA polymerase, RBP11-like subunit DOO79_19845 IPR002942 RNA-binding S4 domain DOO79_19845 IPR022801 Ribosomal protein S4/S9 DOO79_19845 IPR001912 Ribosomal protein S4/S9, N-terminal DOO79_19845 IPR005709 Ribosomal protein S4, bacterial-type DOO79_19845 IPR036986 RNA-binding S4 domain superfamily DOO79_19845 IPR018079 Ribosomal protein S4, conserved site DOO79_19850 IPR001971 Ribosomal protein S11 DOO79_19850 IPR019981 Ribosomal protein S11, bacterial-type DOO79_19850 IPR036967 Ribosomal protein S11 superfamily DOO79_19850 IPR018102 Ribosomal S11, conserved site DOO79_19855 IPR001892 Ribosomal protein S13 DOO79_19855 IPR027437 30s ribosomal protein S13, C-terminal DOO79_19855 IPR019980 Ribosomal protein S13, bacterial-type DOO79_19855 IPR018269 Ribosomal protein S13, conserved site DOO79_19855 IPR010979 Ribosomal protein S13-like, H2TH DOO79_19860 IPR023201 SecY domain superfamily DOO79_19860 IPR030659 SecY conserved site DOO79_19860 IPR026593 Protein translocase subunit SecY DOO79_19860 IPR002208 SecY/SEC61-alpha family DOO79_19865 IPR036227 Ribosomal L18e/L15P superfamily DOO79_19865 IPR030878 Ribosomal protein L15 DOO79_19865 IPR021131 Ribosomal protein L18e/L15P DOO79_19865 IPR005749 Ribosomal protein L15, bacterial-type DOO79_19865 IPR001196 Ribosomal protein L15, conserved site DOO79_19870 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain DOO79_19870 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily DOO79_19870 IPR005996 Ribosomal protein L30, bacterial-type DOO79_19875 IPR018192 Ribosomal protein S5, N-terminal, conserved site DOO79_19875 IPR013810 Ribosomal protein S5, N-terminal DOO79_19875 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOO79_19875 IPR005712 Ribosomal protein S5, bacterial-type DOO79_19875 IPR000851 Ribosomal protein S5 DOO79_19875 IPR020568 Ribosomal protein S5 domain 2-type fold DOO79_19875 IPR005324 Ribosomal protein S5, C-terminal DOO79_19880 IPR004389 Ribosomal protein L18, bacterial-type DOO79_19880 IPR005484 Ribosomal protein L18 DOO79_19885 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily DOO79_19885 IPR019906 Ribosomal protein L6, bacterial-type DOO79_19885 IPR002358 Ribosomal protein L6, conserved site DOO79_19885 IPR000702 Ribosomal protein L6 DOO79_19885 IPR020040 Ribosomal protein L6, alpha-beta domain DOO79_19890 IPR035987 Ribosomal protein S8 superfamily DOO79_19890 IPR000630 Ribosomal protein S8 DOO79_19895 IPR001209 Ribosomal protein S14 DOO79_19895 IPR023036 Ribosomal protein S14, bacterial/plastid DOO79_19900 IPR022803 Ribosomal protein L5 domain superfamily DOO79_19900 IPR031310 Ribosomal protein L5, N-terminal DOO79_19900 IPR002132 Ribosomal protein L5 DOO79_19900 IPR020930 Ribosomal protein L5, bacterial-type DOO79_19900 IPR031309 Ribosomal protein L5, C-terminal DOO79_19900 IPR020929 Ribosomal protein L5, conserved site DOO79_19905 IPR003256 Ribosomal protein L24 DOO79_19905 IPR005824 KOW DOO79_19905 IPR041988 Ribosomal Protein L26/L24, KOW domain DOO79_19905 IPR014722 Ribosomal protein L2, domain 2 DOO79_19905 IPR008991 Translation protein SH3-like domain superfamily DOO79_19910 IPR036853 Ribosomal protein L14 superfamily DOO79_19910 IPR005745 Ribosomal protein L14P, bacterial-type DOO79_19910 IPR019972 Ribosomal protein L14P, conserved site DOO79_19910 IPR000218 Ribosomal protein L14P DOO79_19915 IPR000266 Ribosomal protein S17/S11 DOO79_19915 IPR019984 30S ribosomal protein S17 DOO79_19915 IPR012340 Nucleic acid-binding, OB-fold DOO79_19920 IPR036049 Ribosomal protein L29/L35 superfamily DOO79_19920 IPR001854 Ribosomal protein L29/L35 DOO79_19925 IPR000114 Ribosomal protein L16 DOO79_19925 IPR036920 Ribosomal protein L10e/L16 superfamily DOO79_19925 IPR020798 Ribosomal protein L16, conserved site DOO79_19925 IPR016180 Ribosomal protein L10e/L16 DOO79_19930 IPR001351 Ribosomal protein S3, C-terminal DOO79_19930 IPR018280 Ribosomal protein S3, conserved site DOO79_19930 IPR036419 Ribosomal protein S3, C-terminal domain superfamily DOO79_19930 IPR015946 K homology domain-like, alpha/beta DOO79_19930 IPR004044 K Homology domain, type 2 DOO79_19930 IPR009019 K homology domain superfamily, prokaryotic type DOO79_19930 IPR005704 Ribosomal protein S3, bacterial-type DOO79_19930 IPR004087 K Homology domain DOO79_19935 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type DOO79_19935 IPR018260 Ribosomal protein L22/L17, conserved site DOO79_19935 IPR036394 Ribosomal protein L22/L17 superfamily DOO79_19935 IPR001063 Ribosomal protein L22/L17 DOO79_19940 IPR002222 Ribosomal protein S19/S15 DOO79_19940 IPR023575 Ribosomal protein S19, superfamily DOO79_19940 IPR020934 Ribosomal protein S19 conserved site DOO79_19940 IPR005732 Ribosomal protein S19, bacterial-type DOO79_19945 IPR014722 Ribosomal protein L2, domain 2 DOO79_19945 IPR008991 Translation protein SH3-like domain superfamily DOO79_19945 IPR014726 Ribosomal protein L2, domain 3 DOO79_19945 IPR012340 Nucleic acid-binding, OB-fold DOO79_19945 IPR022671 Ribosomal protein L2, conserved site DOO79_19945 IPR022669 Ribosomal protein L2, C-terminal DOO79_19945 IPR022666 Ribosomal Proteins L2, RNA binding domain DOO79_19945 IPR005880 Ribosomal protein L2, bacterial/organellar-type DOO79_19945 IPR002171 Ribosomal protein L2 DOO79_19950 IPR012678 Ribosomal protein L23/L15e core domain superfamily DOO79_19950 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily DOO79_19950 IPR013025 Ribosomal protein L25/L23 DOO79_19955 IPR013005 50S ribosomal protein uL4 DOO79_19955 IPR023574 Ribosomal protein L4 domain superfamily DOO79_19955 IPR002136 Ribosomal protein L4/L1e DOO79_19960 IPR000597 Ribosomal protein L3 DOO79_19960 IPR009000 Translation protein, beta-barrel domain superfamily DOO79_19960 IPR019926 Ribosomal protein L3, conserved site DOO79_19960 IPR019927 Ribosomal protein L3, bacterial/organelle-type DOO79_19965 IPR001848 Ribosomal protein S10 DOO79_19965 IPR018268 Ribosomal protein S10, conserved site DOO79_19965 IPR027486 Ribosomal protein S10 domain DOO79_19965 IPR036838 Ribosomal protein S10 domain superfamily DOO79_19970 IPR033720 Elongation factor Tu, domain 2 DOO79_19970 IPR005225 Small GTP-binding protein domain DOO79_19970 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal DOO79_19970 IPR009000 Translation protein, beta-barrel domain superfamily DOO79_19970 IPR000795 Transcription factor, GTP-binding domain DOO79_19970 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_19970 IPR031157 Tr-type G domain, conserved site DOO79_19970 IPR004161 Translation elongation factor EFTu-like, domain 2 DOO79_19970 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle DOO79_19970 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain DOO79_19970 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DOO79_19975 IPR035649 EFG, domain V DOO79_19975 IPR041095 Elongation Factor G, domain II DOO79_19975 IPR020568 Ribosomal protein S5 domain 2-type fold DOO79_19975 IPR005517 Translation elongation factor EFG/EF2, domain IV DOO79_19975 IPR004540 Translation elongation factor EFG/EF2 DOO79_19975 IPR009022 Elongation factor G, domain III DOO79_19975 IPR009000 Translation protein, beta-barrel domain superfamily DOO79_19975 IPR000795 Transcription factor, GTP-binding domain DOO79_19975 IPR005225 Small GTP-binding protein domain DOO79_19975 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOO79_19975 IPR035647 EF-G domain III/V-like DOO79_19975 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_19975 IPR031157 Tr-type G domain, conserved site DOO79_19975 IPR004161 Translation elongation factor EFTu-like, domain 2 DOO79_19975 IPR000640 Elongation factor EFG, domain V-like DOO79_19980 IPR023798 Ribosomal protein S7 domain DOO79_19980 IPR020606 Ribosomal protein S7, conserved site DOO79_19980 IPR005717 Ribosomal protein S7, bacterial/organellar-type DOO79_19980 IPR000235 Ribosomal protein S5/S7 DOO79_19980 IPR036823 Ribosomal protein S7 domain superfamily DOO79_19985 IPR012340 Nucleic acid-binding, OB-fold DOO79_19985 IPR006032 Ribosomal protein S12/S23 DOO79_19985 IPR005679 Ribosomal protein S12, bacterial-type DOO79_19990 IPR038120 RNA polymerase Rpb1, funnel domain superfamily DOO79_19990 IPR007081 RNA polymerase Rpb1, domain 5 DOO79_19990 IPR007066 RNA polymerase Rpb1, domain 3 DOO79_19990 IPR042102 RNA polymerase Rpb1, domain 3 superfamily DOO79_19990 IPR007080 RNA polymerase Rpb1, domain 1 DOO79_19990 IPR000722 RNA polymerase, alpha subunit DOO79_19990 IPR012754 DNA-directed RNA polymerase, subunit beta-prime DOO79_19990 IPR007083 RNA polymerase Rpb1, domain 4 DOO79_19990 IPR006592 RNA polymerase, N-terminal DOO79_19995 IPR037034 RNA polymerase Rpb2, domain 2 superfamily DOO79_19995 IPR007642 RNA polymerase Rpb2, domain 2 DOO79_19995 IPR007645 RNA polymerase Rpb2, domain 3 DOO79_19995 IPR007641 RNA polymerase Rpb2, domain 7 DOO79_19995 IPR007121 RNA polymerase, beta subunit, conserved site DOO79_19995 IPR042107 DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily DOO79_19995 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain DOO79_19995 IPR015712 DNA-directed RNA polymerase, subunit 2 DOO79_19995 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain DOO79_19995 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily DOO79_19995 IPR007644 RNA polymerase, beta subunit, protrusion DOO79_19995 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type DOO79_19995 IPR014724 RNA polymerase Rpb2, OB-fold DOO79_20000 IPR000206 Ribosomal protein L7/L12 DOO79_20000 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily DOO79_20000 IPR008932 Ribosomal protein L7/L12, oligomerisation DOO79_20000 IPR013823 Ribosomal protein L7/L12, C-terminal DOO79_20000 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DOO79_20005 IPR022973 Ribosomal protein L10 DOO79_20005 IPR001790 Ribosomal protein L10P DOO79_20010 IPR023673 Ribosomal protein L1, conserved site DOO79_20010 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich DOO79_20010 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein DOO79_20010 IPR023674 Ribosomal protein L1-like DOO79_20010 IPR005878 Ribosomal protein L1, bacterial-type DOO79_20010 IPR002143 Ribosomal protein L1 DOO79_20015 IPR020785 Ribosomal protein L11, conserved site DOO79_20015 IPR000911 Ribosomal protein L11/L12 DOO79_20015 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily DOO79_20015 IPR006519 Ribosomal protein L11, bacterial-type DOO79_20015 IPR020783 Ribosomal protein L11, C-terminal DOO79_20015 IPR036769 Ribosomal protein L11, C-terminal domain superfamily DOO79_20015 IPR020784 Ribosomal protein L11, N-terminal DOO79_20020 IPR008991 Translation protein SH3-like domain superfamily DOO79_20020 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site DOO79_20020 IPR001062 Transcription antitermination protein, NusG DOO79_20020 IPR006645 NusG, N-terminal DOO79_20020 IPR014722 Ribosomal protein L2, domain 2 DOO79_20020 IPR036735 NusG, N-terminal domain superfamily DOO79_20020 IPR005824 KOW DOO79_20025 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit DOO79_20025 IPR038379 SecE superfamily DOO79_20025 IPR005807 SecE subunit of protein translocation complex, bacterial-like DOO79_20035 IPR031157 Tr-type G domain, conserved site DOO79_20035 IPR009000 Translation protein, beta-barrel domain superfamily DOO79_20035 IPR000795 Transcription factor, GTP-binding domain DOO79_20035 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_20035 IPR005225 Small GTP-binding protein domain DOO79_20035 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle DOO79_20035 IPR033720 Elongation factor Tu, domain 2 DOO79_20035 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal DOO79_20035 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DOO79_20035 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain DOO79_20035 IPR004161 Translation elongation factor EFTu-like, domain 2 DOO79_20055 IPR012676 TGS-like DOO79_20055 IPR013029 YchF, C-terminal domain DOO79_20055 IPR023192 TGS-like domain superfamily DOO79_20055 IPR041706 YchF, N-terminal DOO79_20055 IPR004095 TGS DOO79_20055 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_20055 IPR006073 GTP binding domain DOO79_20055 IPR031167 OBG-type guanine nucleotide-binding (G) domain DOO79_20055 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 DOO79_20055 IPR012675 Beta-grasp domain superfamily DOO79_20060 IPR018171 Peptidyl-tRNA hydrolase, conserved site DOO79_20060 IPR001328 Peptidyl-tRNA hydrolase DOO79_20060 IPR036416 Peptidyl-tRNA hydrolase superfamily DOO79_20065 IPR001021 Ribosomal protein L25, long-form DOO79_20065 IPR020057 Ribosomal protein L25, beta domain DOO79_20065 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily DOO79_20065 IPR029751 Ribosomal protein L25 DOO79_20065 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal DOO79_20065 IPR020055 Ribosomal protein L25, short-form DOO79_20065 IPR037121 Ribosomal protein L25, C-terminal DOO79_20070 IPR000836 Phosphoribosyltransferase domain DOO79_20070 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain DOO79_20070 IPR029057 Phosphoribosyltransferase-like DOO79_20070 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site DOO79_20070 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type DOO79_20070 IPR005946 Ribose-phosphate pyrophosphokinase DOO79_20080 IPR036554 GHMP kinase, C-terminal domain superfamily DOO79_20080 IPR013750 GHMP kinase, C-terminal domain DOO79_20080 IPR020568 Ribosomal protein S5 domain 2-type fold DOO79_20080 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOO79_20080 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase DOO79_20080 IPR006204 GHMP kinase N-terminal domain DOO79_20085 IPR004565 Outer membrane lipoprotein LolB DOO79_20085 IPR029046 Lipoprotein localisation LolA/LolB/LppX DOO79_20090 IPR019734 Tetratricopeptide repeat DOO79_20090 IPR013026 Tetratricopeptide repeat-containing domain DOO79_20090 IPR011990 Tetratricopeptide-like helical domain superfamily DOO79_20095 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase DOO79_20095 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase DOO79_20095 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain DOO79_20095 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal DOO79_20095 IPR018214 Glutamyl-tRNA reductase, conserved site DOO79_20095 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily DOO79_20095 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily DOO79_20095 IPR036291 NAD(P)-binding domain superfamily DOO79_20100 IPR005139 Peptide chain release factor DOO79_20100 IPR004373 Peptide chain release factor 1 DOO79_20100 IPR000352 Peptide chain release factor class I DOO79_20120 IPR016898 Polyphosphate kinase 2 DOO79_20120 IPR022488 Polyphosphate kinase-2-related DOO79_20120 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_20120 IPR022486 Polyphosphate kinase 2, PA0141 DOO79_20130 IPR020456 Acylphosphatase DOO79_20130 IPR036046 Acylphosphatase-like domain superfamily DOO79_20130 IPR001792 Acylphosphatase-like domain DOO79_20140 IPR017039 Virulence factor BrkB DOO79_20140 IPR023679 Uncharacterised protein family UPF0761, bacterial DOO79_20145 IPR010089 Flavoprotein WrbA-like DOO79_20145 IPR001226 Flavodoxin, conserved site DOO79_20145 IPR029039 Flavoprotein-like superfamily DOO79_20145 IPR008254 Flavodoxin/nitric oxide synthase DOO79_20145 IPR005025 NADPH-dependent FMN reductase-like DOO79_20155 IPR013780 Glycosyl hydrolase, all-beta DOO79_20155 IPR033452 Glycosyl hydrolase family 30, beta sandwich domain DOO79_20155 IPR033453 Glycosyl hydrolase family 30, TIM-barrel domain DOO79_20155 IPR001139 Glycoside hydrolase family 30 DOO79_20155 IPR017853 Glycoside hydrolase superfamily DOO79_20165 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain DOO79_20165 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily DOO79_20165 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC DOO79_20170 IPR022398 Peptidase S8, subtilisin, His-active site DOO79_20170 IPR036852 Peptidase S8/S53 domain superfamily DOO79_20170 IPR000209 Peptidase S8/S53 domain DOO79_20170 IPR015500 Peptidase S8, subtilisin-related DOO79_20170 IPR034176 Peptidase MprA-like catalytic domain DOO79_20170 IPR007280 Peptidase, C-terminal, archaeal/bacterial DOO79_20170 IPR023827 Peptidase S8, subtilisin, Asp-active site DOO79_20170 IPR023828 Peptidase S8, subtilisin, Ser-active site DOO79_20180 IPR036852 Peptidase S8/S53 domain superfamily DOO79_20180 IPR023827 Peptidase S8, subtilisin, Asp-active site DOO79_20180 IPR022398 Peptidase S8, subtilisin, His-active site DOO79_20180 IPR007280 Peptidase, C-terminal, archaeal/bacterial DOO79_20180 IPR023828 Peptidase S8, subtilisin, Ser-active site DOO79_20180 IPR015500 Peptidase S8, subtilisin-related DOO79_20180 IPR000209 Peptidase S8/S53 domain DOO79_20180 IPR034176 Peptidase MprA-like catalytic domain DOO79_20190 IPR033939 Branched-chain aminotransferase DOO79_20190 IPR001544 Aminotransferase class IV DOO79_20190 IPR005786 Branched-chain amino acid aminotransferase II DOO79_20190 IPR018300 Aminotransferase, class IV, conserved site DOO79_20190 IPR036038 Aminotransferase-like, PLP-dependent enzymes DOO79_20205 IPR034300 NADP transhydrogenase beta-like domain DOO79_20205 IPR012136 NADP transhydrogenase, beta subunit DOO79_20205 IPR029035 DHS-like NAD/FAD-binding domain superfamily DOO79_20210 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal DOO79_20230 IPR026255 NAD(P) transhydrogenase, alpha subunit DOO79_20230 IPR036291 NAD(P)-binding domain superfamily DOO79_20230 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain DOO79_20230 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal DOO79_20230 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal DOO79_20230 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 DOO79_20230 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 DOO79_20260 IPR002562 3'-5' exonuclease domain DOO79_20260 IPR020045 DNA polymerase I-like, H3TH domain DOO79_20260 IPR018320 DNA polymerase 1 DOO79_20260 IPR036279 5'-3' exonuclease, C-terminal domain superfamily DOO79_20260 IPR008918 Helix-hairpin-helix motif, class 2 DOO79_20260 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal DOO79_20260 IPR002298 DNA polymerase A DOO79_20260 IPR002421 5'-3' exonuclease, N-terminal DOO79_20260 IPR001098 DNA-directed DNA polymerase, family A, palm domain DOO79_20260 IPR012337 Ribonuclease H-like superfamily DOO79_20260 IPR036397 Ribonuclease H superfamily DOO79_20260 IPR029060 PIN-like domain superfamily DOO79_20260 IPR019760 DNA-directed DNA polymerase, family A, conserved site DOO79_20265 IPR020084 NUDIX hydrolase, conserved site DOO79_20265 IPR004385 Nucleoside diphosphate pyrophosphatase DOO79_20265 IPR015797 NUDIX hydrolase-like domain superfamily DOO79_20265 IPR000086 NUDIX hydrolase domain DOO79_20275 IPR029058 Alpha/Beta hydrolase fold DOO79_20275 IPR000073 Alpha/beta hydrolase fold-1 DOO79_20275 IPR005944 Proline iminopeptidase DOO79_20275 IPR002410 Peptidase S33 DOO79_20280 IPR007848 Methyltransferase small domain DOO79_20280 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOO79_20280 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific DOO79_20280 IPR040758 Release factor glutamine methyltransferase, N-terminal domain DOO79_20280 IPR004556 Methyltransferase HemK-like DOO79_20280 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DOO79_20285 IPR036249 Thioredoxin-like superfamily DOO79_20285 IPR013766 Thioredoxin domain DOO79_20285 IPR019479 Peroxiredoxin, C-terminal DOO79_20285 IPR024706 Peroxiredoxin, AhpC-type DOO79_20285 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant DOO79_20285 IPR017559 Alkyl hydroperoxide reductase subunit C DOO79_20290 IPR023753 FAD/NAD(P)-binding domain DOO79_20290 IPR036188 FAD/NAD(P)-binding domain superfamily DOO79_20290 IPR012081 Alkyl hydroperoxide reductase subunit F DOO79_20290 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site DOO79_20290 IPR012336 Thioredoxin-like fold DOO79_20290 IPR002109 Glutaredoxin DOO79_20290 IPR036249 Thioredoxin-like superfamily DOO79_20295 IPR000847 Transcription regulator HTH, LysR DOO79_20295 IPR005119 LysR, substrate-binding DOO79_20295 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_20295 IPR036390 Winged helix DNA-binding domain superfamily DOO79_20305 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal DOO79_20305 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain DOO79_20305 IPR028625 Regulator of nucleoside diphosphate kinase DOO79_20305 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily DOO79_20305 IPR023459 Transcription elongation factor GreA/GreB family DOO79_20310 IPR013785 Aldolase-type TIM barrel DOO79_20310 IPR004730 Transaldolase type 1 DOO79_20310 IPR001585 Transaldolase/Fructose-6-phosphate aldolase DOO79_20310 IPR018225 Transaldolase, active site DOO79_20320 IPR002569 Peptide methionine sulphoxide reductase MsrA DOO79_20320 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily DOO79_20335 IPR001789 Signal transduction response regulator, receiver domain DOO79_20335 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain DOO79_20335 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_20335 IPR036641 HPT domain superfamily DOO79_20335 IPR003660 HAMP domain DOO79_20335 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_20335 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_20335 IPR005467 Histidine kinase domain DOO79_20335 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOO79_20335 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_20335 IPR033414 Periplasmic sensor domain DOO79_20335 IPR011006 CheY-like superfamily DOO79_20340 IPR011006 CheY-like superfamily DOO79_20340 IPR000160 GGDEF domain DOO79_20340 IPR029787 Nucleotide cyclase DOO79_20340 IPR001789 Signal transduction response regulator, receiver domain DOO79_20355 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOO79_20355 IPR000924 Glutamyl/glutaminyl-tRNA synthetase DOO79_20355 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain DOO79_20355 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain DOO79_20355 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily DOO79_20355 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DOO79_20355 IPR004514 Glutamine-tRNA synthetase DOO79_20355 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal DOO79_20355 IPR022861 Glutamine-tRNA ligase, bacterial DOO79_20355 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily DOO79_20365 IPR000620 EamA domain DOO79_20385 IPR011224 Ribosomal RNA large subunit methyltransferase M DOO79_20385 IPR040739 RlmM ferredoxin-like domain DOO79_20385 IPR002877 Ribosomal RNA methyltransferase FtsJ domain DOO79_20385 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOO79_20395 IPR036291 NAD(P)-binding domain superfamily DOO79_20395 IPR004104 Oxidoreductase, C-terminal DOO79_20395 IPR000683 Oxidoreductase, N-terminal DOO79_20400 IPR013658 SMP-30/Gluconolactonase/LRE-like region DOO79_20400 IPR011042 Six-bladed beta-propeller, TolB-like DOO79_20400 IPR006311 Twin-arginine translocation pathway, signal sequence DOO79_20400 IPR005511 Senescence marker protein-30 (SMP-30) DOO79_20420 IPR001753 Enoyl-CoA hydratase/isomerase DOO79_20420 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site DOO79_20420 IPR029045 ClpP/crotonase-like domain superfamily DOO79_20425 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DOO79_20425 IPR016163 Aldehyde dehydrogenase, C-terminal DOO79_20425 IPR016161 Aldehyde/histidinol dehydrogenase DOO79_20425 IPR015590 Aldehyde dehydrogenase domain DOO79_20425 IPR016162 Aldehyde dehydrogenase, N-terminal DOO79_20430 IPR025110 AMP-binding enzyme, C-terminal domain DOO79_20430 IPR020459 AMP-binding DOO79_20430 IPR020845 AMP-binding, conserved site DOO79_20430 IPR000873 AMP-dependent synthetase/ligase DOO79_20430 IPR042099 AMP-dependent synthetase-like superfamily DOO79_20435 IPR005119 LysR, substrate-binding DOO79_20435 IPR012787 Pca transcription factor PcaQ DOO79_20435 IPR000847 Transcription regulator HTH, LysR DOO79_20435 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_20435 IPR036390 Winged helix DNA-binding domain superfamily DOO79_20440 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B DOO79_20440 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit DOO79_20440 IPR036622 Dioxygenase LigAB, LigA subunit superfamily DOO79_20440 IPR034940 Gallate dioxygenase, C-terminal DOO79_20445 IPR034937 Protocatechuate 4,5-dioxygenase beta chain DOO79_20445 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B DOO79_20450 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_20450 IPR011711 GntR, C-terminal DOO79_20450 IPR000524 Transcription regulator HTH, GntR DOO79_20450 IPR008920 Transcription regulator FadR/GntR, C-terminal DOO79_20450 IPR036390 Winged helix DNA-binding domain superfamily DOO79_20470 IPR002938 FAD-binding domain DOO79_20470 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 DOO79_20470 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site DOO79_20470 IPR036188 FAD/NAD(P)-binding domain superfamily DOO79_20475 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site DOO79_20475 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 DOO79_20475 IPR002938 FAD-binding domain DOO79_20475 IPR036188 FAD/NAD(P)-binding domain superfamily DOO79_20475 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase DOO79_20490 IPR036451 Cobalamin adenosyltransferase-like superfamily DOO79_20490 IPR016030 Cobalamin adenosyltransferase-like DOO79_20490 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type DOO79_20495 IPR000286 Histone deacetylase family DOO79_20495 IPR023696 Ureohydrolase domain superfamily DOO79_20495 IPR037138 Histone deacetylase domain superfamily DOO79_20495 IPR023801 Histone deacetylase domain DOO79_20500 IPR007543 LptD, C-terminal DOO79_20500 IPR005653 Organic solvent tolerance-like, N-terminal DOO79_20500 IPR020889 LPS-assembly protein LptD DOO79_20505 IPR027304 Trigger factor/SurA domain superfamily DOO79_20505 IPR015391 SurA N-terminal DOO79_20505 IPR023034 Peptidyl-prolyl isomerase SurA DOO79_20505 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type DOO79_20510 IPR005255 PdxA family DOO79_20510 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase DOO79_20515 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOO79_20515 IPR011530 Ribosomal RNA adenine dimethylase DOO79_20515 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal DOO79_20515 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site DOO79_20515 IPR023165 rRNA adenine dimethylase-like DOO79_20515 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm DOO79_20520 IPR023065 Uncharacterised protein family ApaG DOO79_20520 IPR007474 ApaG domain DOO79_20520 IPR036767 ApaG domain superfamily DOO79_20525 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type DOO79_20525 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) DOO79_20525 IPR029052 Metallo-dependent phosphatase-like DOO79_20525 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase DOO79_20530 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_20530 IPR003593 AAA+ ATPase domain DOO79_20530 IPR003439 ABC transporter-like DOO79_20530 IPR017871 ABC transporter, conserved site DOO79_20530 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal DOO79_20540 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOO79_20540 IPR035906 MetI-like superfamily DOO79_20545 IPR030678 Peptide/nickel binding protein, MppA-type DOO79_20545 IPR039424 Solute-binding protein family 5 DOO79_20545 IPR023765 Solute-binding protein family 5, conserved site DOO79_20545 IPR000914 Solute-binding protein family 5 domain DOO79_20550 IPR036661 Luciferase-like domain superfamily DOO79_20550 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A DOO79_20550 IPR011251 Luciferase-like domain DOO79_20570 IPR029039 Flavoprotein-like superfamily DOO79_20570 IPR019912 FMN reductase, MsuE-like DOO79_20570 IPR005025 NADPH-dependent FMN reductase-like DOO79_20575 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent DOO79_20575 IPR011251 Luciferase-like domain DOO79_20575 IPR036661 Luciferase-like domain superfamily DOO79_20585 IPR035906 MetI-like superfamily DOO79_20585 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOO79_20590 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB DOO79_20590 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_20590 IPR017871 ABC transporter, conserved site DOO79_20590 IPR003439 ABC transporter-like DOO79_20590 IPR003593 AAA+ ATPase domain DOO79_20595 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily DOO79_20595 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DOO79_20595 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DOO79_20595 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DOO79_20595 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain DOO79_20600 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_20600 IPR009057 Homeobox-like domain superfamily DOO79_20600 IPR003593 AAA+ ATPase domain DOO79_20600 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DOO79_20600 IPR002078 RNA polymerase sigma factor 54 interaction domain DOO79_20600 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DOO79_20600 IPR029995 Transcriptional activator SfnR/FlbD DOO79_20600 IPR025944 Sigma-54 interaction domain, conserved site DOO79_20605 IPR012259 Dihydrofolate reductase DOO79_20605 IPR001796 Dihydrofolate reductase domain DOO79_20605 IPR017925 Dihydrofolate reductase conserved site DOO79_20605 IPR024072 Dihydrofolate reductase-like domain superfamily DOO79_20615 IPR020940 Thymidylate synthase, active site DOO79_20615 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain DOO79_20615 IPR000398 Thymidylate synthase DOO79_20615 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily DOO79_20620 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt DOO79_20650 IPR029033 Histidine phosphatase superfamily DOO79_20650 IPR013078 Histidine phosphatase superfamily, clade-1 DOO79_20650 IPR005952 Phosphoglycerate mutase 1 DOO79_20650 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site DOO79_20655 IPR007581 Endonuclease V DOO79_20665 IPR003829 Pirin, N-terminal domain DOO79_20665 IPR014710 RmlC-like jelly roll fold DOO79_20665 IPR012093 Pirin DOO79_20665 IPR008778 Pirin, C-terminal domain DOO79_20665 IPR011051 RmlC-like cupin domain superfamily DOO79_20680 IPR003829 Pirin, N-terminal domain DOO79_20680 IPR014710 RmlC-like jelly roll fold DOO79_20680 IPR008778 Pirin, C-terminal domain DOO79_20680 IPR012093 Pirin DOO79_20680 IPR011051 RmlC-like cupin domain superfamily DOO79_20685 IPR003706 CstA, N-terminal domain DOO79_20685 IPR025299 CstA, C-terminal domain DOO79_20690 IPR007423 Selenoprotein, putative DOO79_20710 IPR029058 Alpha/Beta hydrolase fold DOO79_20740 IPR027051 XdhC Rossmann domain DOO79_20740 IPR003777 XdhC- CoxI DOO79_20745 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding DOO79_20745 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily DOO79_20745 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily DOO79_20745 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead DOO79_20750 IPR005107 CO dehydrogenase flavoprotein, C-terminal DOO79_20750 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily DOO79_20750 IPR016166 FAD-binding domain, PCMH-type DOO79_20750 IPR036318 FAD-binding, type PCMH-like superfamily DOO79_20750 IPR002346 Molybdopterin dehydrogenase, FAD-binding DOO79_20750 IPR016169 FAD-binding, type PCMH, subdomain 2 DOO79_20755 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain DOO79_20755 IPR036010 2Fe-2S ferredoxin-like superfamily DOO79_20755 IPR036884 [2Fe-2S]-binding domain superfamily DOO79_20755 IPR002888 [2Fe-2S]-binding DOO79_20755 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DOO79_20755 IPR012675 Beta-grasp domain superfamily DOO79_20755 IPR006311 Twin-arginine translocation pathway, signal sequence DOO79_20755 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site DOO79_20760 IPR018201 Beta-ketoacyl synthase, active site DOO79_20760 IPR011032 GroES-like superfamily DOO79_20760 IPR014043 Acyl transferase DOO79_20760 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DOO79_20760 IPR013149 Alcohol dehydrogenase, C-terminal DOO79_20760 IPR042104 Polyketide synthase, dehydratase domain superfamily DOO79_20760 IPR013968 Polyketide synthase, ketoreductase domain DOO79_20760 IPR032821 Ketoacyl-synthetase, C-terminal extension DOO79_20760 IPR020843 Polyketide synthase, enoylreductase domain DOO79_20760 IPR020807 Polyketide synthase, dehydratase domain DOO79_20760 IPR014031 Beta-ketoacyl synthase, C-terminal DOO79_20760 IPR014030 Beta-ketoacyl synthase, N-terminal DOO79_20760 IPR013154 Alcohol dehydrogenase, N-terminal DOO79_20760 IPR009081 Phosphopantetheine binding ACP domain DOO79_20760 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding DOO79_20760 IPR036291 NAD(P)-binding domain superfamily DOO79_20760 IPR016039 Thiolase-like DOO79_20760 IPR020806 Polyketide synthase, phosphopantetheine-binding domain DOO79_20760 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DOO79_20760 IPR036736 ACP-like superfamily DOO79_20765 IPR001633 EAL domain DOO79_20765 IPR000160 GGDEF domain DOO79_20765 IPR003018 GAF domain DOO79_20765 IPR029016 GAF-like domain superfamily DOO79_20765 IPR029787 Nucleotide cyclase DOO79_20765 IPR001294 Phytochrome DOO79_20765 IPR035919 EAL domain superfamily DOO79_20765 IPR016132 Phytochrome chromophore attachment domain DOO79_20765 IPR013515 Phytochrome, central region DOO79_20770 IPR000424 Primosome PriB/single-strand DNA-binding DOO79_20770 IPR012340 Nucleic acid-binding, OB-fold DOO79_20770 IPR011344 Single-stranded DNA-binding protein DOO79_20775 IPR008949 Isoprenoid synthase domain superfamily DOO79_20775 IPR000092 Polyprenyl synthetase DOO79_20775 IPR033749 Polyprenyl synthetase, conserved site DOO79_20790 IPR013221 Mur ligase, central DOO79_20790 IPR036615 Mur ligase, C-terminal domain superfamily DOO79_20790 IPR004101 Mur ligase, C-terminal DOO79_20790 IPR018109 Folylpolyglutamate synthetase, conserved site DOO79_20790 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase DOO79_20790 IPR036565 Mur-like, catalytic domain superfamily DOO79_20805 IPR001341 Aspartate kinase DOO79_20805 IPR001048 Aspartate/glutamate/uridylate kinase DOO79_20805 IPR005260 Aspartate kinase, monofunctional class DOO79_20805 IPR018042 Aspartate kinase, conserved site DOO79_20805 IPR041745 Lysine-sensitive aspartokinase 3, N-terminal catalytic domain DOO79_20805 IPR036393 Acetylglutamate kinase-like superfamily DOO79_20805 IPR002912 ACT domain DOO79_20810 IPR003719 Phenazine biosynthesis PhzF protein DOO79_20825 IPR036102 OsmC/Ohr superfamily DOO79_20825 IPR003718 OsmC/Ohr family DOO79_20825 IPR019904 Peroxiredoxin OsmC DOO79_20825 IPR015946 K homology domain-like, alpha/beta DOO79_20830 IPR006130 Aspartate/ornithine carbamoyltransferase DOO79_20830 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily DOO79_20830 IPR002082 Aspartate carbamoyltransferase DOO79_20830 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding DOO79_20830 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain DOO79_20835 IPR037027 YqgF/RNase H-like domain superfamily DOO79_20835 IPR006641 YqgF/RNase H-like domain DOO79_20835 IPR012337 Ribonuclease H-like superfamily DOO79_20835 IPR005227 Putative pre-16S rRNA nuclease DOO79_20840 IPR003774 Protein of unknown function UPF0301 DOO79_20850 IPR016181 Acyl-CoA N-acyltransferase DOO79_20850 IPR000182 GNAT domain DOO79_20850 IPR005019 Methyladenine glycosylase DOO79_20850 IPR025777 GMP synthetase ATP pyrophosphatase domain DOO79_20850 IPR011257 DNA glycosylase DOO79_20850 IPR017926 Glutamine amidotransferase DOO79_20850 IPR001674 GMP synthase, C-terminal DOO79_20850 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOO79_20850 IPR029062 Class I glutamine amidotransferase-like DOO79_20860 IPR012334 Pectin lyase fold DOO79_20860 IPR011050 Pectin lyase fold/virulence factor DOO79_20860 IPR004898 Pectate lyase PlyH/PlyE-like DOO79_20865 IPR001482 Type II/IV secretion system protein DOO79_20865 IPR003593 AAA+ ATPase domain DOO79_20865 IPR006321 Pilus retraction protein PilT DOO79_20865 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_20870 IPR001482 Type II/IV secretion system protein DOO79_20870 IPR006321 Pilus retraction protein PilT DOO79_20870 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_20870 IPR003593 AAA+ ATPase domain DOO79_20875 IPR011078 Pyridoxal phosphate homeostasis protein DOO79_20875 IPR001608 Alanine racemase, N-terminal DOO79_20875 IPR029066 PLP-binding barrel DOO79_20880 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOO79_20880 IPR036291 NAD(P)-binding domain superfamily DOO79_20880 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal DOO79_20880 IPR000304 Pyrroline-5-carboxylate reductase DOO79_20880 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain DOO79_20890 IPR016047 Peptidase M23 DOO79_20890 IPR011055 Duplicated hybrid motif DOO79_20910 IPR006286 Deglycase PfpI DOO79_20910 IPR029062 Class I glutamine amidotransferase-like DOO79_20910 IPR002818 DJ-1/PfpI DOO79_20920 IPR036390 Winged helix DNA-binding domain superfamily DOO79_20920 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_20920 IPR000944 Transcription regulator Rrf2-type DOO79_20920 IPR030489 Transcription regulator Rrf2-type, conserved site DOO79_20925 IPR037284 SUF system FeS cluster assembly, SufBD superfamily DOO79_20925 IPR000825 SUF system FeS cluster assembly, SufBD DOO79_20925 IPR010231 SUF system FeS cluster assembly, SufB DOO79_20930 IPR003593 AAA+ ATPase domain DOO79_20930 IPR003439 ABC transporter-like DOO79_20930 IPR010230 FeS cluster assembly SUF system, ATPase SufC DOO79_20930 IPR017871 ABC transporter, conserved site DOO79_20930 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_20935 IPR037284 SUF system FeS cluster assembly, SufBD superfamily DOO79_20935 IPR011542 SUF system FeS cluster assembly, SufD DOO79_20935 IPR000825 SUF system FeS cluster assembly, SufBD DOO79_20940 IPR000192 Aminotransferase class V domain DOO79_20940 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOO79_20940 IPR015424 Pyridoxal phosphate-dependent transferase DOO79_20940 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DOO79_20940 IPR010970 Cysteine desulfurase, SufS DOO79_20940 IPR016454 Cysteine desulfurase DOO79_20940 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOO79_20950 IPR017941 Rieske [2Fe-2S] iron-sulphur domain DOO79_20950 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily DOO79_20955 IPR012910 TonB-dependent receptor, plug domain DOO79_20955 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DOO79_20955 IPR010105 TonB-dependent siderophore receptor DOO79_20955 IPR030148 Catecholate siderophore receptor Fiu DOO79_20955 IPR000531 TonB-dependent receptor-like, beta-barrel DOO79_20955 IPR010916 TonB box, conserved site DOO79_20955 IPR039423 TonB-dependent receptor-like DOO79_20955 IPR037066 TonB-dependent receptor, plug domain superfamily DOO79_20960 IPR041097 PKHD-type hydroxylase C-terminal domain DOO79_20960 IPR023550 PKHD-type hydroxylase DOO79_20960 IPR006620 Prolyl 4-hydroxylase, alpha subunit DOO79_20960 IPR005123 Oxoglutarate/iron-dependent dioxygenase DOO79_20985 IPR042159 Flavin-trafficking protein ApbE DOO79_20985 IPR024932 Flavin transferase ApbE DOO79_20985 IPR003374 ApbE-like superfamily DOO79_20990 IPR017938 Riboflavin synthase-like beta-barrel DOO79_20990 IPR029039 Flavoprotein-like superfamily DOO79_20990 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DOO79_20990 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily DOO79_20990 IPR017927 FAD-binding domain, ferredoxin reductase-type DOO79_20990 IPR001094 Flavodoxin-like DOO79_20990 IPR001433 Oxidoreductase FAD/NAD(P)-binding DOO79_20990 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria DOO79_20990 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding DOO79_20990 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain DOO79_20990 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase DOO79_20990 IPR008254 Flavodoxin/nitric oxide synthase DOO79_21005 IPR004509 Competence protein ComEA, helix-hairpin-helix domain DOO79_21005 IPR010994 RuvA domain 2-like DOO79_21020 IPR002575 Aminoglycoside phosphotransferase DOO79_21020 IPR011009 Protein kinase-like domain superfamily DOO79_21025 IPR005835 Nucleotidyl transferase domain DOO79_21025 IPR029044 Nucleotide-diphospho-sugar transferases DOO79_21030 IPR017788 DnaA regulatory inactivator Hda DOO79_21030 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae DOO79_21030 IPR020591 Chromosomal replication control, initiator DnaA-like DOO79_21030 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_21030 IPR013317 Chromosomal replication initiator protein DnaA DOO79_21035 IPR002549 Transmembrane protein TqsA-like DOO79_21045 IPR036921 PurM-like, N-terminal domain superfamily DOO79_21045 IPR016188 PurM-like, N-terminal domain DOO79_21045 IPR010918 PurM-like, C-terminal domain DOO79_21045 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase DOO79_21045 IPR036676 PurM-like, C-terminal domain superfamily DOO79_21055 IPR001555 Phosphoribosylglycinamide formyltransferase, active site DOO79_21055 IPR002376 Formyl transferase, N-terminal DOO79_21055 IPR004607 Phosphoribosylglycinamide formyltransferase DOO79_21055 IPR036477 Formyl transferase, N-terminal domain superfamily DOO79_21075 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta DOO79_21075 IPR036968 Enolpyruvate transferase domain superfamily DOO79_21075 IPR001986 Enolpyruvate transferase domain DOO79_21075 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase DOO79_21080 IPR036065 BolA-like superfamily DOO79_21080 IPR002634 BolA protein DOO79_21085 IPR000644 CBS domain DOO79_21085 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type DOO79_21085 IPR001347 Sugar isomerase (SIS) DOO79_21085 IPR035474 KpsF-like, SIS domain DOO79_21090 IPR010023 KdsC family DOO79_21090 IPR023214 HAD superfamily DOO79_21090 IPR036412 HAD-like superfamily DOO79_21100 IPR005653 Organic solvent tolerance-like, N-terminal DOO79_21100 IPR014340 Lipopolysaccharide export system protein LptA DOO79_21105 IPR003593 AAA+ ATPase domain DOO79_21105 IPR003439 ABC transporter-like DOO79_21105 IPR017871 ABC transporter, conserved site DOO79_21105 IPR030921 LPS export ABC transporter, ATP-binding protein LptB DOO79_21105 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_21110 IPR007634 RNA polymerase sigma factor 54, DNA-binding DOO79_21110 IPR007046 RNA polymerase sigma factor 54, core-binding domain DOO79_21110 IPR000394 RNA polymerase sigma factor 54 DOO79_21110 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily DOO79_21115 IPR036567 Ribosome hibernation promotion factor-like DOO79_21115 IPR003489 Ribosome hibernation promoting factor/RaiA DOO79_21120 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN DOO79_21120 IPR016152 Phosphotransferase/anion transporter DOO79_21120 IPR002178 PTS EIIA type-2 domain DOO79_21125 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal DOO79_21125 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily DOO79_21125 IPR003755 HPr(Ser) kinase/phosphorylase DOO79_21125 IPR011104 HPr kinase/phosphorylase, C-terminal DOO79_21130 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_21130 IPR005337 RapZ-like family DOO79_21140 IPR000032 Phosphocarrier protein HPr-like DOO79_21140 IPR035895 HPr-like superfamily DOO79_21140 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site DOO79_21140 IPR002114 Phosphotransferase system, HPr serine phosphorylation site DOO79_21145 IPR040442 Pyruvate kinase-like domain superfamily DOO79_21145 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DOO79_21145 IPR036618 PtsI, HPr-binding domain superfamily DOO79_21145 IPR008731 Phosphotransferase system, enzyme I N-terminal DOO79_21145 IPR024692 Phosphotransferase system, enzyme I DOO79_21145 IPR008279 PEP-utilising enzyme, mobile domain DOO79_21145 IPR036637 Phosphohistidine domain superfamily DOO79_21145 IPR023151 PEP-utilising enzyme, conserved site DOO79_21145 IPR000121 PEP-utilising enzyme, C-terminal DOO79_21145 IPR018274 PEP-utilising enzyme, active site DOO79_21145 IPR006318 Phosphotransferase system, enzyme I-like DOO79_21155 IPR038076 MgtE, N-terminal domain superfamily DOO79_21155 IPR000644 CBS domain DOO79_21155 IPR006668 Magnesium transporter, MgtE intracellular domain DOO79_21155 IPR006667 SLC41 divalent cation transporters, integral membrane domain DOO79_21155 IPR006669 Magnesium transporter MgtE DOO79_21155 IPR038048 Magnesium transporter MgtE, transmembrane domain DOO79_21155 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily DOO79_21160 IPR029058 Alpha/Beta hydrolase fold DOO79_21160 IPR000801 Putative esterase DOO79_21170 IPR003317 Cytochrome ubiquinol oxidase subunit 2 DOO79_21175 IPR002585 Cytochrome ubiquinol oxidase subunit 1 DOO79_21195 IPR004840 Amino acid permease, conserved site DOO79_21195 IPR004841 Amino acid permease/ SLC12A domain DOO79_21205 IPR012334 Pectin lyase fold DOO79_21205 IPR011050 Pectin lyase fold/virulence factor DOO79_21205 IPR002022 Pectate lyase DOO79_21215 IPR029058 Alpha/Beta hydrolase fold DOO79_21215 IPR000073 Alpha/beta hydrolase fold-1 DOO79_21215 IPR005945 Proline-specific peptidase DOO79_21215 IPR002410 Peptidase S33 DOO79_21225 IPR016032 Signal transduction response regulator, C-terminal effector DOO79_21225 IPR000792 Transcription regulator LuxR, C-terminal DOO79_21225 IPR011006 CheY-like superfamily DOO79_21230 IPR004841 Amino acid permease/ SLC12A domain DOO79_21250 IPR009003 Peptidase S1, PA clan DOO79_21260 IPR001279 Metallo-beta-lactamase DOO79_21260 IPR013471 Ribonuclease Z/BN DOO79_21260 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOO79_21320 IPR000551 MerR-type HTH domain DOO79_21320 IPR009061 Putative DNA-binding domain superfamily DOO79_21320 IPR010211 Redox-sensitive transcriptional activator SoxR DOO79_21320 IPR015358 Transcription regulator MerR, DNA binding DOO79_21325 IPR004638 Drug resistance transporter EmrB-like DOO79_21325 IPR011701 Major facilitator superfamily DOO79_21325 IPR036259 MFS transporter superfamily DOO79_21325 IPR020846 Major facilitator superfamily domain DOO79_21335 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain DOO79_21335 IPR016185 Pre-ATP-grasp domain superfamily DOO79_21360 IPR007157 PspA/IM30 DOO79_21370 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative DOO79_21370 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal DOO79_21370 IPR012349 FMN-binding split barrel DOO79_21370 IPR000659 Pyridoxamine 5'-phosphate oxidase DOO79_21370 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site DOO79_21375 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_21375 IPR023000 Shikimate kinase, conserved site DOO79_21375 IPR031322 Shikimate kinase/gluconokinase DOO79_21375 IPR000623 Shikimate kinase/Threonine synthase-like 1 DOO79_21380 IPR030963 3-dehydroquinate synthase family DOO79_21380 IPR016037 3-dehydroquinate synthase AroB DOO79_21380 IPR030960 3-dehydroquinate synthase domain DOO79_21390 IPR000257 Uroporphyrinogen decarboxylase (URO-D) DOO79_21390 IPR038071 UROD/MetE-like superfamily DOO79_21390 IPR006361 Uroporphyrinogen decarboxylase HemE DOO79_21395 IPR036259 MFS transporter superfamily DOO79_21395 IPR020846 Major facilitator superfamily domain DOO79_21395 IPR023721 Multidrug resistance protein MdtD DOO79_21395 IPR004638 Drug resistance transporter EmrB-like DOO79_21395 IPR011701 Major facilitator superfamily DOO79_21400 IPR033414 Periplasmic sensor domain DOO79_21400 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_21400 IPR011006 CheY-like superfamily DOO79_21400 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_21400 IPR036641 HPT domain superfamily DOO79_21400 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_21400 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOO79_21400 IPR003660 HAMP domain DOO79_21400 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain DOO79_21400 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_21400 IPR001789 Signal transduction response regulator, receiver domain DOO79_21400 IPR005467 Histidine kinase domain DOO79_21405 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOO79_21405 IPR036641 HPT domain superfamily DOO79_21405 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_21405 IPR011006 CheY-like superfamily DOO79_21405 IPR003660 HAMP domain DOO79_21405 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_21405 IPR005467 Histidine kinase domain DOO79_21405 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_21405 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain DOO79_21405 IPR001789 Signal transduction response regulator, receiver domain DOO79_21405 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_21405 IPR033414 Periplasmic sensor domain DOO79_21415 IPR001789 Signal transduction response regulator, receiver domain DOO79_21415 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_21415 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_21415 IPR036641 HPT domain superfamily DOO79_21415 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_21415 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_21415 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain DOO79_21415 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOO79_21415 IPR011006 CheY-like superfamily DOO79_21415 IPR005467 Histidine kinase domain DOO79_21420 IPR007372 Lipid/polyisoprenoid-binding, YceI-like DOO79_21420 IPR023480 Uncharacterised protein family UPF0312/YceI DOO79_21420 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily DOO79_21440 IPR029009 Allosteric substrate binding domain superfamily DOO79_21440 IPR005130 Serine dehydratase-like, alpha subunit DOO79_21440 IPR005131 Serine dehydratase beta chain DOO79_21440 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form DOO79_21445 IPR017727 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, BphD DOO79_21445 IPR029058 Alpha/Beta hydrolase fold DOO79_21445 IPR000073 Alpha/beta hydrolase fold-1 DOO79_21445 IPR000639 Epoxide hydrolase-like DOO79_21455 IPR001048 Aspartate/glutamate/uridylate kinase DOO79_21455 IPR036291 NAD(P)-binding domain superfamily DOO79_21455 IPR019811 Homoserine dehydrogenase, conserved site DOO79_21455 IPR001342 Homoserine dehydrogenase, catalytic DOO79_21455 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I DOO79_21455 IPR018042 Aspartate kinase, conserved site DOO79_21455 IPR001341 Aspartate kinase DOO79_21455 IPR036393 Acetylglutamate kinase-like superfamily DOO79_21455 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain DOO79_21455 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding DOO79_21460 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOO79_21460 IPR015424 Pyridoxal phosphate-dependent transferase DOO79_21460 IPR011821 O-succinylhomoserine (thiol)-lyase DOO79_21460 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme DOO79_21460 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOO79_21465 IPR000073 Alpha/beta hydrolase fold-1 DOO79_21465 IPR029058 Alpha/Beta hydrolase fold DOO79_21465 IPR008220 Homoserine/serine acetyltransferase MetX-like DOO79_21470 IPR016047 Peptidase M23 DOO79_21470 IPR013731 Opacity-associated protein A, N-terminal DOO79_21470 IPR018392 LysM domain DOO79_21470 IPR011055 Duplicated hybrid motif DOO79_21475 IPR032090 Peptide chain release factor 3, C-terminal DOO79_21475 IPR004548 Peptide chain release factor 3 DOO79_21475 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily DOO79_21475 IPR035647 EF-G domain III/V-like DOO79_21475 IPR031157 Tr-type G domain, conserved site DOO79_21475 IPR041732 Peptide chain release factor 3, GTP-binding domain DOO79_21475 IPR000795 Transcription factor, GTP-binding domain DOO79_21475 IPR009000 Translation protein, beta-barrel domain superfamily DOO79_21475 IPR005225 Small GTP-binding protein domain DOO79_21475 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_21480 IPR004254 AdipoR/Haemolysin-III-related DOO79_21480 IPR005744 Hly-III DOO79_21485 IPR007844 AsmA DOO79_21490 IPR005990 Inosine-5'-monophosphate dehydrogenase DOO79_21490 IPR000644 CBS domain DOO79_21490 IPR015875 IMP dehydrogenase / GMP reductase, conserved site DOO79_21490 IPR013785 Aldolase-type TIM barrel DOO79_21490 IPR001093 IMP dehydrogenase/GMP reductase DOO79_21495 IPR001173 Glycosyltransferase 2-like DOO79_21495 IPR029044 Nucleotide-diphospho-sugar transferases DOO79_21500 IPR001264 Glycosyl transferase, family 51 DOO79_21500 IPR036950 Penicillin binding protein transglycosylase domain DOO79_21500 IPR011812 Biosynthetic peptidoglycan transglycosylase DOO79_21500 IPR023346 Lysozyme-like domain superfamily DOO79_21505 IPR016154 Heat shock protein Hsp33, C-terminal DOO79_21505 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily DOO79_21505 IPR016153 Heat shock protein Hsp33, N-terminal DOO79_21505 IPR000397 Heat shock protein Hsp33 DOO79_21515 IPR010916 TonB box, conserved site DOO79_21515 IPR010917 TonB-dependent receptor, conserved site DOO79_21515 IPR012910 TonB-dependent receptor, plug domain DOO79_21515 IPR039426 Vitamin B12 transporter BtuB-like DOO79_21515 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DOO79_21515 IPR037066 TonB-dependent receptor, plug domain superfamily DOO79_21515 IPR000531 TonB-dependent receptor-like, beta-barrel DOO79_21530 IPR001647 DNA-binding HTH domain, TetR-type DOO79_21530 IPR009057 Homeobox-like domain superfamily DOO79_21530 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DOO79_21535 IPR000639 Epoxide hydrolase-like DOO79_21535 IPR000073 Alpha/beta hydrolase fold-1 DOO79_21535 IPR029058 Alpha/Beta hydrolase fold DOO79_21540 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type DOO79_21540 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DOO79_21540 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily DOO79_21540 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DOO79_21540 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DOO79_21540 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DOO79_21570 IPR017453 Glycine cleavage system H-protein, subgroup DOO79_21570 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site DOO79_21570 IPR000089 Biotin/lipoyl attachment DOO79_21570 IPR011053 Single hybrid motif DOO79_21570 IPR033753 Glycine cleavage system H-protein/Simiate DOO79_21570 IPR002930 Glycine cleavage system H-protein DOO79_21575 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 DOO79_21575 IPR022903 Glycine cleavage system T protein, bacteria DOO79_21575 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal DOO79_21575 IPR028896 Aminomethyltransferase-like DOO79_21575 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain DOO79_21575 IPR006223 Glycine cleavage system T protein DOO79_21575 IPR006222 Aminomethyltransferase, folate-binding domain DOO79_21595 IPR003844 Uncharacterised protein family UPF0060 DOO79_21600 IPR011551 NTP pyrophosphohydrolase MazG DOO79_21600 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core DOO79_21605 IPR020550 Inositol monophosphatase, conserved site DOO79_21605 IPR000760 Inositol monophosphatase-like DOO79_21605 IPR020583 Inositol monophosphatase, metal-binding site DOO79_21605 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ DOO79_21610 IPR015797 NUDIX hydrolase-like domain superfamily DOO79_21610 IPR020084 NUDIX hydrolase, conserved site DOO79_21610 IPR000086 NUDIX hydrolase domain DOO79_21615 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOO79_21615 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOO79_21615 IPR015424 Pyridoxal phosphate-dependent transferase DOO79_21615 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA DOO79_21615 IPR005814 Aminotransferase class-III DOO79_21620 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DOO79_21620 IPR006700 Ribosomal RNA small subunit methyltransferase E DOO79_21620 IPR029028 Alpha/beta knot methyltransferases DOO79_21620 IPR015947 PUA-like superfamily DOO79_21625 IPR003836 Glucokinase DOO79_21640 IPR011583 Chitinase II DOO79_21640 IPR036779 LysM domain superfamily DOO79_21640 IPR018392 LysM domain DOO79_21640 IPR041704 CFLE, GH18 catalytic domain DOO79_21640 IPR001223 Glycoside hydrolase family 18, catalytic domain DOO79_21640 IPR017853 Glycoside hydrolase superfamily DOO79_21640 IPR029070 Chitinase insertion domain superfamily DOO79_21655 IPR037524 PA14/GLEYA domain DOO79_21655 IPR011658 PA14 domain DOO79_21655 IPR002772 Glycoside hydrolase family 3 C-terminal domain DOO79_21655 IPR013783 Immunoglobulin-like fold DOO79_21655 IPR026891 Fibronectin type III-like domain DOO79_21655 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily DOO79_21655 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily DOO79_21655 IPR001764 Glycoside hydrolase, family 3, N-terminal DOO79_21655 IPR017853 Glycoside hydrolase superfamily DOO79_21660 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_21660 IPR003593 AAA+ ATPase domain DOO79_21660 IPR011527 ABC transporter type 1, transmembrane domain DOO79_21660 IPR036640 ABC transporter type 1, transmembrane domain superfamily DOO79_21660 IPR003439 ABC transporter-like DOO79_21660 IPR017871 ABC transporter, conserved site DOO79_21660 IPR039421 Type I protein exporter DOO79_21660 IPR005074 Peptidase C39, bacteriocin processing DOO79_21660 IPR033838 Colicin V processing peptidase DOO79_21690 IPR012939 Glycosyl hydrolase family 92 DOO79_21690 IPR014718 Glycoside hydrolase-type carbohydrate-binding DOO79_21690 IPR008928 Six-hairpin glycosidase superfamily DOO79_21690 IPR041371 Glycosyl hydrolase family 92 N-terminal domain DOO79_21690 IPR005887 Alpha-1,2-mannosidase, putative DOO79_21695 IPR019801 Glycoside hydrolase, family 35, conserved site DOO79_21695 IPR001944 Glycoside hydrolase, family 35 DOO79_21695 IPR031330 Glycoside hydrolase 35, catalytic domain DOO79_21695 IPR008979 Galactose-binding-like domain superfamily DOO79_21695 IPR026283 Beta-galactosidase 1-like DOO79_21695 IPR017853 Glycoside hydrolase superfamily DOO79_21730 IPR005627 Copper homeostasis protein CutC DOO79_21730 IPR036822 Copper homeostasis (CutC) domain superfamily DOO79_21730 IPR023648 Copper homeostasis CutC domain DOO79_21735 IPR000246 Peptidase T2, asparaginase 2 DOO79_21735 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DOO79_21735 IPR029055 Nucleophile aminohydrolases, N-terminal DOO79_21750 IPR000182 GNAT domain DOO79_21750 IPR016181 Acyl-CoA N-acyltransferase DOO79_21765 IPR002545 CheW-like domain DOO79_21765 IPR004105 Histidine kinase CheA-like, homodimeric domain DOO79_21765 IPR036061 CheW-like domain superfamily DOO79_21765 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily DOO79_21765 IPR005467 Histidine kinase domain DOO79_21765 IPR011006 CheY-like superfamily DOO79_21765 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_21765 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain DOO79_21765 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_21765 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_21765 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_21765 IPR001789 Signal transduction response regulator, receiver domain DOO79_21765 IPR036641 HPT domain superfamily DOO79_21770 IPR004090 Chemotaxis methyl-accepting receptor DOO79_21770 IPR029095 NarX-like, N-terminal DOO79_21770 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DOO79_21770 IPR003660 HAMP domain DOO79_21775 IPR036061 CheW-like domain superfamily DOO79_21775 IPR039315 Chemotaxis protein CheW DOO79_21775 IPR002545 CheW-like domain DOO79_21780 IPR011006 CheY-like superfamily DOO79_21780 IPR001789 Signal transduction response regulator, receiver domain DOO79_21785 IPR001789 Signal transduction response regulator, receiver domain DOO79_21785 IPR011006 CheY-like superfamily DOO79_21790 IPR011761 ATP-grasp fold DOO79_21790 IPR004218 Prokaryotic glutathione synthetase, ATP-binding DOO79_21790 IPR016185 Pre-ATP-grasp domain superfamily DOO79_21790 IPR004215 Prokaryotic glutathione synthetase, N-terminal DOO79_21790 IPR006284 Glutathione synthetase, prokaryotic DOO79_21790 IPR013815 ATP-grasp fold, subdomain 1 DOO79_21800 IPR005502 ADP-ribosylation/Crystallin J1 DOO79_21800 IPR036705 ADP-ribosylation/Crystallin J1 superfamily DOO79_21805 IPR000905 Gcp-like domain DOO79_21805 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB DOO79_21810 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type DOO79_21810 IPR006555 ATP-dependent helicase, C-terminal DOO79_21810 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_21810 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOO79_21810 IPR006935 Helicase/UvrB, N-terminal DOO79_21820 IPR012338 Beta-lactamase/transpeptidase-like DOO79_21820 IPR001264 Glycosyl transferase, family 51 DOO79_21820 IPR023346 Lysozyme-like domain superfamily DOO79_21820 IPR011813 Penicillin-binding protein 1B DOO79_21820 IPR001460 Penicillin-binding protein, transpeptidase DOO79_21820 IPR028166 Bifunctional transglycosylase second domain DOO79_21820 IPR036950 Penicillin binding protein transglycosylase domain DOO79_21825 IPR001173 Glycosyltransferase 2-like DOO79_21825 IPR029044 Nucleotide-diphospho-sugar transferases DOO79_21840 IPR007685 RelA/SpoT DOO79_21840 IPR002912 ACT domain DOO79_21840 IPR012675 Beta-grasp domain superfamily DOO79_21840 IPR003607 HD/PDEase domain DOO79_21840 IPR033655 RelA, TGS domain DOO79_21840 IPR004811 RelA/SpoT family DOO79_21840 IPR012676 TGS-like DOO79_21840 IPR004095 TGS DOO79_21845 IPR011725 Coenzyme PQQ biosynthesis protein A DOO79_21850 IPR011842 Coenzyme PQQ biosynthesis protein B DOO79_21850 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOO79_21850 IPR001279 Metallo-beta-lactamase DOO79_21855 IPR011845 Coenzyme PQQ biosynthesis protein C DOO79_21855 IPR039068 Pyrroloquinoline-quinone synthase-like DOO79_21855 IPR004305 Thiaminase-2/PQQC DOO79_21855 IPR016084 Haem oxygenase-like, multi-helical DOO79_21860 IPR041881 Coenzyme PQQ synthesis protein D superfamily DOO79_21860 IPR008792 Coenzyme PQQ synthesis protein D DOO79_21860 IPR022479 Coenzyme PQQ synthesis D, bacteria DOO79_21865 IPR007197 Radical SAM DOO79_21865 IPR017200 Coenzyme PQQ synthesis protein E DOO79_21865 IPR023885 4Fe4S-binding SPASM domain DOO79_21865 IPR013785 Aldolase-type TIM barrel DOO79_21865 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria DOO79_21890 IPR024590 RNA helicase HrpA, C-terminal DOO79_21890 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOO79_21890 IPR011709 Domain of unknown function DUF1605 DOO79_21890 IPR010222 RNA helicase HrpA DOO79_21890 IPR011545 DEAD/DEAH box helicase domain DOO79_21890 IPR003593 AAA+ ATPase domain DOO79_21890 IPR001650 Helicase, C-terminal DOO79_21890 IPR007502 Helicase-associated domain DOO79_21890 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_21895 IPR009078 Ferritin-like superfamily DOO79_21895 IPR002177 DNA-binding protein Dps DOO79_21895 IPR023188 DNA-binding protein Dps, conserved site DOO79_21895 IPR012347 Ferritin-like DOO79_21895 IPR008331 Ferritin/DPS protein domain DOO79_21905 IPR001650 Helicase, C-terminal DOO79_21905 IPR002121 HRDC domain DOO79_21905 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_21905 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain DOO79_21905 IPR018982 RQC domain DOO79_21905 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOO79_21905 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial DOO79_21905 IPR010997 HRDC-like superfamily DOO79_21905 IPR011545 DEAD/DEAH box helicase domain DOO79_21905 IPR004589 DNA helicase, ATP-dependent, RecQ type DOO79_21905 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_21940 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DOO79_21940 IPR004090 Chemotaxis methyl-accepting receptor DOO79_21940 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DOO79_21940 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DOO79_21940 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DOO79_21940 IPR003660 HAMP domain DOO79_21960 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_21960 IPR001610 PAC motif DOO79_21960 IPR000014 PAS domain DOO79_21960 IPR000700 PAS-associated, C-terminal DOO79_21960 IPR035965 PAS domain superfamily DOO79_21960 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_21960 IPR011102 Signal transduction histidine kinase, HWE region DOO79_21965 IPR018317 Queuosine biosynthesis protein QueC DOO79_21965 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOO79_21975 IPR007197 Radical SAM DOO79_21975 IPR024924 7-carboxy-7-deazaguanine synthase-like DOO79_21975 IPR013785 Aldolase-type TIM barrel DOO79_21985 IPR006664 Outer membrane protein, bacterial DOO79_21985 IPR006690 Outer membrane protein, OmpA-like, conserved site DOO79_21985 IPR006665 OmpA-like domain DOO79_21985 IPR036737 OmpA-like domain superfamily DOO79_21985 IPR039001 Peptidoglycan-associated lipoprotein DOO79_21985 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal DOO79_21990 IPR036752 TolB, N-terminal domain superfamily DOO79_21990 IPR007195 TolB, N-terminal DOO79_21990 IPR014167 Tol-Pal system protein TolB DOO79_21990 IPR011659 WD40-like Beta Propeller DOO79_21990 IPR011042 Six-bladed beta-propeller, TolB-like DOO79_22000 IPR014168 Tol-Pal system protein TolR DOO79_22000 IPR003400 Biopolymer transport protein ExbD/TolR DOO79_22005 IPR014163 Tol-Pal system, TolQ DOO79_22005 IPR002898 MotA/TolQ/ExbB proton channel DOO79_22010 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site DOO79_22010 IPR029069 HotDog domain superfamily DOO79_22010 IPR006683 Thioesterase domain DOO79_22010 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase DOO79_22010 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family DOO79_22015 IPR036390 Winged helix DNA-binding domain superfamily DOO79_22015 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_22015 IPR008823 RuvB C-terminal winged helix domain DOO79_22015 IPR008824 RuvB-like P-loop domain DOO79_22015 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_22015 IPR003593 AAA+ ATPase domain DOO79_22015 IPR041445 RuvB, AAA lid domain DOO79_22015 IPR004605 DNA helicase, Holliday junction RuvB-type DOO79_22025 IPR003855 Potassium transporter DOO79_22025 IPR023051 Potassium uptake protein, low affinity, Kup DOO79_22030 IPR036267 RuvA, C-terminal domain superfamily DOO79_22030 IPR012340 Nucleic acid-binding, OB-fold DOO79_22030 IPR000085 Bacterial DNA recombination protein RuvA DOO79_22030 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial DOO79_22030 IPR010994 RuvA domain 2-like DOO79_22030 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 DOO79_22030 IPR011114 Holliday junction DNA helicase RuvA, C-terminal DOO79_22035 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site DOO79_22035 IPR036397 Ribonuclease H superfamily DOO79_22035 IPR012337 Ribonuclease H-like superfamily DOO79_22035 IPR002176 Crossover junction endodeoxyribonuclease RuvC DOO79_22040 IPR017856 Integrase-like, N-terminal DOO79_22040 IPR002876 Transcriptional regulator TACO1-like DOO79_22040 IPR029072 YebC-like DOO79_22040 IPR026564 Transcriptional regulator TACO1-like, domain 3 DOO79_22055 IPR029351 GAD domain DOO79_22055 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb DOO79_22055 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type DOO79_22055 IPR004115 GAD-like domain superfamily DOO79_22055 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) DOO79_22055 IPR006195 Aminoacyl-tRNA synthetase, class II DOO79_22055 IPR004524 Aspartate-tRNA ligase, type 1 DOO79_22055 IPR012340 Nucleic acid-binding, OB-fold DOO79_22070 IPR011701 Major facilitator superfamily DOO79_22070 IPR036259 MFS transporter superfamily DOO79_22070 IPR020846 Major facilitator superfamily domain DOO79_22085 IPR017850 Alkaline-phosphatase-like, core domain superfamily DOO79_22085 IPR017767 Bacterial phospholipase C, phosphocholine-specific DOO79_22085 IPR007312 Phosphoesterase DOO79_22085 IPR008475 Bacterial phospholipase C, C-terminal domain DOO79_22085 IPR006311 Twin-arginine translocation pathway, signal sequence DOO79_22100 IPR012338 Beta-lactamase/transpeptidase-like DOO79_22100 IPR023650 Beta-lactamase, class-A active site DOO79_22100 IPR000871 Beta-lactamase, class-A DOO79_22100 IPR006311 Twin-arginine translocation pathway, signal sequence DOO79_22105 IPR037420 HTH-type transcriptional activator AmpR, PBP2 DOO79_22105 IPR036390 Winged helix DNA-binding domain superfamily DOO79_22105 IPR005119 LysR, substrate-binding DOO79_22105 IPR000847 Transcription regulator HTH, LysR DOO79_22105 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_22115 IPR032781 ABC-transporter extension domain DOO79_22115 IPR003439 ABC transporter-like DOO79_22115 IPR017871 ABC transporter, conserved site DOO79_22115 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_22115 IPR003593 AAA+ ATPase domain DOO79_22120 IPR000531 TonB-dependent receptor-like, beta-barrel DOO79_22120 IPR012910 TonB-dependent receptor, plug domain DOO79_22120 IPR010101 TonB-dependent vitamin B12 transporter BtuB DOO79_22120 IPR039426 Vitamin B12 transporter BtuB-like DOO79_22120 IPR037066 TonB-dependent receptor, plug domain superfamily DOO79_22120 IPR010916 TonB box, conserved site DOO79_22120 IPR010917 TonB-dependent receptor, conserved site DOO79_22120 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DOO79_22140 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DOO79_22140 IPR010917 TonB-dependent receptor, conserved site DOO79_22140 IPR010105 TonB-dependent siderophore receptor DOO79_22140 IPR037066 TonB-dependent receptor, plug domain superfamily DOO79_22140 IPR012910 TonB-dependent receptor, plug domain DOO79_22140 IPR039426 Vitamin B12 transporter BtuB-like DOO79_22140 IPR000531 TonB-dependent receptor-like, beta-barrel DOO79_22145 IPR002397 Cytochrome P450, B-class DOO79_22145 IPR017972 Cytochrome P450, conserved site DOO79_22145 IPR036396 Cytochrome P450 superfamily DOO79_22145 IPR001128 Cytochrome P450 DOO79_22155 IPR038770 Sodium/solute symporter superfamily DOO79_22155 IPR036291 NAD(P)-binding domain superfamily DOO79_22155 IPR006153 Cation/H+ exchanger DOO79_22155 IPR004771 K+/H+ exchanger DOO79_22155 IPR003148 Regulator of K+ conductance, N-terminal DOO79_22180 IPR010105 TonB-dependent siderophore receptor DOO79_22180 IPR010917 TonB-dependent receptor, conserved site DOO79_22180 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DOO79_22180 IPR000531 TonB-dependent receptor-like, beta-barrel DOO79_22180 IPR011662 Secretin/TonB, short N-terminal domain DOO79_22180 IPR037066 TonB-dependent receptor, plug domain superfamily DOO79_22180 IPR012910 TonB-dependent receptor, plug domain DOO79_22180 IPR010916 TonB box, conserved site DOO79_22190 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal DOO79_22190 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like DOO79_22190 IPR022770 Ferric iron reductase FhuF domain DOO79_22195 IPR020846 Major facilitator superfamily domain DOO79_22195 IPR036259 MFS transporter superfamily DOO79_22195 IPR023692 Multidrug resistance protein MdtG DOO79_22195 IPR011701 Major facilitator superfamily DOO79_22195 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG DOO79_22205 IPR000183 Ornithine/DAP/Arg decarboxylase DOO79_22205 IPR029066 PLP-binding barrel DOO79_22205 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal DOO79_22205 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal DOO79_22205 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal DOO79_22205 IPR022272 Lipocalin family conserved site DOO79_22205 IPR002433 Ornithine decarboxylase DOO79_22235 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily DOO79_22235 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal DOO79_22235 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic DOO79_22235 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like DOO79_22240 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase DOO79_22240 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_22245 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain DOO79_22245 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 DOO79_22245 IPR004459 Cobyric acid synthase CobQ DOO79_22245 IPR017929 CobB/CobQ glutamine amidotransferase DOO79_22245 IPR029062 Class I glutamine amidotransferase-like DOO79_22245 IPR011698 CobB/CobQ-like glutamine amidotransferase DOO79_22245 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_22250 IPR015424 Pyridoxal phosphate-dependent transferase DOO79_22250 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOO79_22250 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOO79_22250 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site DOO79_22250 IPR005860 L-threonine-O-3-phosphate decarboxylase DOO79_22250 IPR004839 Aminotransferase, class I/classII DOO79_22260 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR DOO79_22260 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain DOO79_22260 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_22275 IPR012910 TonB-dependent receptor, plug domain DOO79_22275 IPR037066 TonB-dependent receptor, plug domain superfamily DOO79_22275 IPR000531 TonB-dependent receptor-like, beta-barrel DOO79_22275 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DOO79_22275 IPR010101 TonB-dependent vitamin B12 transporter BtuB DOO79_22275 IPR039426 Vitamin B12 transporter BtuB-like DOO79_22280 IPR017730 Chaperonin ClpB DOO79_22280 IPR003593 AAA+ ATPase domain DOO79_22280 IPR004176 Clp, N-terminal DOO79_22280 IPR036628 Clp, N-terminal domain superfamily DOO79_22280 IPR001270 ClpA/B family DOO79_22280 IPR018368 ClpA/B, conserved site 1 DOO79_22280 IPR028299 ClpA/B, conserved site 2 DOO79_22280 IPR041546 ClpA/ClpB, AAA lid domain DOO79_22280 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_22280 IPR019489 Clp ATPase, C-terminal DOO79_22280 IPR003959 ATPase, AAA-type, core DOO79_22285 IPR017871 ABC transporter, conserved site DOO79_22285 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_22285 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB DOO79_22285 IPR003439 ABC transporter-like DOO79_22285 IPR003593 AAA+ ATPase domain DOO79_22290 IPR035906 MetI-like superfamily DOO79_22290 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOO79_22295 IPR010067 Aliphatic sulfonates-binding protein DOO79_22295 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DOO79_22295 IPR015168 SsuA/THI5-like DOO79_22300 IPR023210 NADP-dependent oxidoreductase domain DOO79_22300 IPR036812 NADP-dependent oxidoreductase domain superfamily DOO79_22305 IPR011251 Luciferase-like domain DOO79_22305 IPR036661 Luciferase-like domain superfamily DOO79_22305 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A DOO79_22310 IPR039426 Vitamin B12 transporter BtuB-like DOO79_22310 IPR012910 TonB-dependent receptor, plug domain DOO79_22310 IPR000531 TonB-dependent receptor-like, beta-barrel DOO79_22310 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DOO79_22310 IPR010105 TonB-dependent siderophore receptor DOO79_22320 IPR000305 GIY-YIG endonuclease DOO79_22320 IPR035901 GIY-YIG endonuclease superfamily DOO79_22355 IPR039426 Vitamin B12 transporter BtuB-like DOO79_22355 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DOO79_22355 IPR010916 TonB box, conserved site DOO79_22355 IPR000531 TonB-dependent receptor-like, beta-barrel DOO79_22355 IPR037066 TonB-dependent receptor, plug domain superfamily DOO79_22355 IPR012910 TonB-dependent receptor, plug domain DOO79_22355 IPR010101 TonB-dependent vitamin B12 transporter BtuB DOO79_22355 IPR010917 TonB-dependent receptor, conserved site DOO79_22365 IPR003337 Trehalose-phosphatase DOO79_22365 IPR023214 HAD superfamily DOO79_22365 IPR006379 HAD-superfamily hydrolase, subfamily IIB DOO79_22365 IPR036412 HAD-like superfamily DOO79_22370 IPR012341 Six-hairpin glycosidase-like superfamily DOO79_22370 IPR011613 GH15-like domain DOO79_22370 IPR008928 Six-hairpin glycosidase superfamily DOO79_22375 IPR001830 Glycosyl transferase, family 20 DOO79_22375 IPR012766 Alpha,alpha-trehalose-phosphate synthase DOO79_22380 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DOO79_22380 IPR017511 PQQ-dependent membrane bound dehydrogenase DOO79_22380 IPR002372 Pyrrolo-quinoline quinone repeat DOO79_22380 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily DOO79_22380 IPR001479 Quinoprotein dehydrogenase, conserved site DOO79_22390 IPR004090 Chemotaxis methyl-accepting receptor DOO79_22390 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DOO79_22390 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DOO79_22390 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DOO79_22390 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DOO79_22390 IPR003660 HAMP domain DOO79_22395 IPR007263 Protein of unknown function DUF393 DOO79_22410 IPR002942 RNA-binding S4 domain DOO79_22410 IPR006145 Pseudouridine synthase, RsuA/RluA DOO79_22410 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site DOO79_22410 IPR020103 Pseudouridine synthase, catalytic domain superfamily DOO79_22410 IPR006225 Pseudouridine synthase, RluC/RluD DOO79_22410 IPR036986 RNA-binding S4 domain superfamily DOO79_22415 IPR011990 Tetratricopeptide-like helical domain superfamily DOO79_22415 IPR017689 Outer membrane protein assembly factor BamD DOO79_22415 IPR039565 Outer membrane lipoprotein BamD-like DOO79_22425 IPR022310 NAD/GMP synthase DOO79_22425 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOO79_22425 IPR003694 NAD(+) synthetase DOO79_22425 IPR000132 Nitrilase/cyanide hydratase, conserved site DOO79_22425 IPR003010 Carbon-nitrogen hydrolase DOO79_22425 IPR036526 Carbon-nitrogen hydrolase superfamily DOO79_22425 IPR014445 Glutamine-dependent NAD(+) synthetase DOO79_22435 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site DOO79_22435 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site DOO79_22435 IPR003781 CoA-binding DOO79_22435 IPR005810 Succinyl-CoA ligase, alpha subunit DOO79_22435 IPR016102 Succinyl-CoA synthetase-like DOO79_22435 IPR036291 NAD(P)-binding domain superfamily DOO79_22435 IPR005811 ATP-citrate lyase/succinyl-CoA ligase DOO79_22440 IPR016102 Succinyl-CoA synthetase-like DOO79_22440 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type DOO79_22440 IPR013815 ATP-grasp fold, subdomain 1 DOO79_22440 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site DOO79_22440 IPR005809 Succinate--CoA synthetase, beta subunit DOO79_22440 IPR011761 ATP-grasp fold DOO79_22440 IPR005811 ATP-citrate lyase/succinyl-CoA ligase DOO79_22445 IPR003594 Histidine kinase/HSP90-like ATPase DOO79_22445 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOO79_22445 IPR000014 PAS domain DOO79_22445 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOO79_22445 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOO79_22445 IPR005467 Histidine kinase domain DOO79_22445 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOO79_22450 IPR025944 Sigma-54 interaction domain, conserved site DOO79_22450 IPR003593 AAA+ ATPase domain DOO79_22450 IPR011006 CheY-like superfamily DOO79_22450 IPR009057 Homeobox-like domain superfamily DOO79_22450 IPR002197 DNA binding HTH domain, Fis-type DOO79_22450 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DOO79_22450 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DOO79_22450 IPR002078 RNA polymerase sigma factor 54 interaction domain DOO79_22450 IPR001789 Signal transduction response regulator, receiver domain DOO79_22450 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_22460 IPR001482 Type II/IV secretion system protein DOO79_22460 IPR007831 General secretory system II, protein E, N-terminal DOO79_22460 IPR037257 General secretory system II, protein E, N-terminal superfamily DOO79_22460 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_22460 IPR013374 ATPase, type IV, pilus assembly, PilB DOO79_22460 IPR042181 Type II secretion system, protein E, N-terminal DOO79_22470 IPR001482 Type II/IV secretion system protein DOO79_22470 IPR013374 ATPase, type IV, pilus assembly, PilB DOO79_22470 IPR042181 Type II secretion system, protein E, N-terminal DOO79_22470 IPR037257 General secretory system II, protein E, N-terminal superfamily DOO79_22470 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_22470 IPR007831 General secretory system II, protein E, N-terminal DOO79_22475 IPR012902 Prokaryotic N-terminal methylation site DOO79_22475 IPR001082 Fimbrial protein pilin DOO79_22480 IPR012902 Prokaryotic N-terminal methylation site DOO79_22480 IPR001082 Fimbrial protein pilin DOO79_22485 IPR042094 Type II secretion system F domain superfamily DOO79_22485 IPR018076 Type II secretion system F domain DOO79_22485 IPR001992 Type II secretion system conserved site DOO79_22485 IPR003004 GspF/PilC family DOO79_22490 IPR000045 Prepilin type IV endopeptidase, peptidase domain DOO79_22490 IPR014032 Peptidase A24A, prepilin type IV, bacterial DOO79_22490 IPR010627 Peptidase A24A, N-terminal DOO79_22495 IPR001977 Dephospho-CoA kinase DOO79_22495 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_22505 IPR010129 Type I secretion membrane fusion protein, HlyD family DOO79_22505 IPR006144 Secretion protein HlyD, conserved site DOO79_22510 IPR011527 ABC transporter type 1, transmembrane domain DOO79_22510 IPR039395 Peptidase C39-like A DOO79_22510 IPR005074 Peptidase C39, bacteriocin processing DOO79_22510 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_22510 IPR010132 ATPase, type I secretion system, HlyB DOO79_22510 IPR003439 ABC transporter-like DOO79_22510 IPR036640 ABC transporter type 1, transmembrane domain superfamily DOO79_22510 IPR039421 Type I protein exporter DOO79_22510 IPR003593 AAA+ ATPase domain DOO79_22510 IPR017871 ABC transporter, conserved site DOO79_22515 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOO79_22515 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOO79_22515 IPR004839 Aminotransferase, class I/classII DOO79_22515 IPR015424 Pyridoxal phosphate-dependent transferase DOO79_22545 IPR002509 NodB homology domain DOO79_22545 IPR026402 Chitooligosaccharide deacetylase NodB DOO79_22545 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel DOO79_22550 IPR033658 Glutaredoxin, PICOT-like DOO79_22550 IPR002109 Glutaredoxin DOO79_22550 IPR014434 Monothiol glutaredoxin DOO79_22550 IPR004480 Monothiol glutaredoxin-related DOO79_22550 IPR036249 Thioredoxin-like superfamily DOO79_22565 IPR032466 Metal-dependent hydrolase DOO79_22565 IPR011059 Metal-dependent hydrolase, composite domain superfamily DOO79_22565 IPR006680 Amidohydrolase-related DOO79_22565 IPR020043 Deacetylase Atu3266-like DOO79_22570 IPR011059 Metal-dependent hydrolase, composite domain superfamily DOO79_22570 IPR032466 Metal-dependent hydrolase DOO79_22570 IPR006680 Amidohydrolase-related DOO79_22570 IPR023512 Deaminase MtaD/DadD DOO79_22605 IPR003797 DegV DOO79_22610 IPR036821 Peptide deformylase superfamily DOO79_22610 IPR023635 Peptide deformylase DOO79_22640 IPR003921 Cellulose synthase, subunit C DOO79_22640 IPR008410 Cellulose synthase operon C, C-terminal DOO79_22640 IPR011990 Tetratricopeptide-like helical domain superfamily DOO79_22640 IPR019734 Tetratricopeptide repeat DOO79_22640 IPR013026 Tetratricopeptide repeat-containing domain DOO79_22645 IPR012341 Six-hairpin glycosidase-like superfamily DOO79_22645 IPR002037 Glycoside hydrolase, family 8 DOO79_22645 IPR008928 Six-hairpin glycosidase superfamily DOO79_22650 IPR003920 Cellulose synthase, subunit B DOO79_22650 IPR018513 Cellulose synthase BcsB, bacterial DOO79_22650 IPR008979 Galactose-binding-like domain superfamily DOO79_22655 IPR029044 Nucleotide-diphospho-sugar transferases DOO79_22655 IPR009875 PilZ domain DOO79_22655 IPR001173 Glycosyltransferase 2-like DOO79_22655 IPR005150 Cellulose synthase DOO79_22655 IPR003919 Cellulose synthase, subunit A DOO79_22670 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal DOO79_22670 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain DOO79_22670 IPR006406 Nicotinate phosphoribosyltransferase DOO79_22670 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase DOO79_22670 IPR007229 Nicotinate phosphoribosyltransferase family DOO79_22710 IPR029044 Nucleotide-diphospho-sugar transferases DOO79_22725 IPR039423 TonB-dependent receptor-like DOO79_22725 IPR012910 TonB-dependent receptor, plug domain DOO79_22725 IPR030149 TonB-dependent siderophore receptor FcuA/FatA DOO79_22725 IPR010916 TonB box, conserved site DOO79_22725 IPR037066 TonB-dependent receptor, plug domain superfamily DOO79_22725 IPR000531 TonB-dependent receptor-like, beta-barrel DOO79_22725 IPR010105 TonB-dependent siderophore receptor DOO79_22725 IPR010917 TonB-dependent receptor, conserved site DOO79_22725 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DOO79_22735 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DOO79_22735 IPR036390 Winged helix DNA-binding domain superfamily DOO79_22735 IPR036388 Winged helix-like DNA-binding domain superfamily DOO79_22735 IPR011663 UbiC transcription regulator-associated DOO79_22735 IPR017722 Phosphonate utilization transcriptional regulator PhnR DOO79_22735 IPR000524 Transcription regulator HTH, GntR DOO79_22750 IPR001775 GspD/PilQ family DOO79_22750 IPR005644 NolW-like DOO79_22750 IPR038591 NolW-like superfamily DOO79_22750 IPR004846 Type II/III secretion system DOO79_22750 IPR013356 Type II secretion system GspD DOO79_22750 IPR004845 Type II secretion system GspD, conserved site DOO79_22760 IPR034756 Type II secretion system (T2SS), protein M subtype b DOO79_22765 IPR007813 Fimbrial assembly PilN DOO79_22770 IPR038072 GspK, central domain superfamily DOO79_22770 IPR005628 General secretion pathway protein K DOO79_22775 IPR012902 Prokaryotic N-terminal methylation site DOO79_22780 IPR012902 Prokaryotic N-terminal methylation site DOO79_22780 IPR010052 Type II secretion system protein I DOO79_22785 IPR022346 General secretion pathway, GspH DOO79_22785 IPR002416 Type II secretion system protein H DOO79_22790 IPR010054 General secretion pathway protein G DOO79_22790 IPR012902 Prokaryotic N-terminal methylation site DOO79_22790 IPR000983 Bacterial general secretion pathway protein G-type pilin DOO79_22790 IPR013545 Type II secretion system protein G DOO79_22795 IPR003004 GspF/PilC family DOO79_22795 IPR042094 Type II secretion system F domain superfamily DOO79_22795 IPR018076 Type II secretion system F domain DOO79_22795 IPR001992 Type II secretion system conserved site DOO79_22805 IPR007831 General secretory system II, protein E, N-terminal DOO79_22805 IPR001482 Type II/IV secretion system protein DOO79_22805 IPR042181 Type II secretion system, protein E, N-terminal DOO79_22805 IPR037257 General secretory system II, protein E, N-terminal superfamily DOO79_22805 IPR003593 AAA+ ATPase domain DOO79_22805 IPR013369 Type II secretion system GspE DOO79_22805 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_22810 IPR023827 Peptidase S8, subtilisin, Asp-active site DOO79_22810 IPR022398 Peptidase S8, subtilisin, His-active site DOO79_22810 IPR000209 Peptidase S8/S53 domain DOO79_22810 IPR034176 Peptidase MprA-like catalytic domain DOO79_22810 IPR036852 Peptidase S8/S53 domain superfamily DOO79_22810 IPR023828 Peptidase S8, subtilisin, Ser-active site DOO79_22810 IPR015500 Peptidase S8, subtilisin-related DOO79_22810 IPR007280 Peptidase, C-terminal, archaeal/bacterial DOO79_22815 IPR024973 ESPR domain DOO79_22815 IPR011049 Serralysin-like metalloprotease, C-terminal DOO79_22815 IPR008635 Coiled stalk of trimeric autotransporter adhesin DOO79_22815 IPR005594 YadA-like, C-terminal DOO79_22815 IPR008640 Head domain of trimeric autotransporter adhesin DOO79_22820 IPR022398 Peptidase S8, subtilisin, His-active site DOO79_22820 IPR023827 Peptidase S8, subtilisin, Asp-active site DOO79_22820 IPR023828 Peptidase S8, subtilisin, Ser-active site DOO79_22820 IPR036852 Peptidase S8/S53 domain superfamily DOO79_22820 IPR007280 Peptidase, C-terminal, archaeal/bacterial DOO79_22820 IPR034176 Peptidase MprA-like catalytic domain DOO79_22820 IPR015500 Peptidase S8, subtilisin-related DOO79_22820 IPR000209 Peptidase S8/S53 domain DOO79_22825 IPR005594 YadA-like, C-terminal DOO79_22825 IPR011049 Serralysin-like metalloprotease, C-terminal DOO79_22825 IPR024973 ESPR domain DOO79_22825 IPR008640 Head domain of trimeric autotransporter adhesin DOO79_22825 IPR008635 Coiled stalk of trimeric autotransporter adhesin DOO79_22830 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily DOO79_22830 IPR010073 Phosphoribosylformylglycinamidine synthase PurL DOO79_22830 IPR029062 Class I glutamine amidotransferase-like DOO79_22830 IPR036921 PurM-like, N-terminal domain superfamily DOO79_22830 IPR010918 PurM-like, C-terminal domain DOO79_22830 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain DOO79_22830 IPR017926 Glutamine amidotransferase DOO79_22830 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal DOO79_22830 IPR036676 PurM-like, C-terminal domain superfamily DOO79_22840 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily DOO79_22840 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal DOO79_22840 IPR033954 Disulphide bond isomerase, DsbC/G DOO79_22840 IPR012336 Thioredoxin-like fold DOO79_22840 IPR036249 Thioredoxin-like superfamily DOO79_22840 IPR017937 Thioredoxin, conserved site DOO79_22840 IPR013766 Thioredoxin domain DOO79_22850 IPR023009 Tyrosine recombinase XerC/XerD DOO79_22850 IPR011010 DNA breaking-rejoining enzyme, catalytic core DOO79_22850 IPR011932 Tyrosine recombinase XerD DOO79_22850 IPR010998 Integrase/recombinase, N-terminal DOO79_22850 IPR002104 Integrase, catalytic domain DOO79_22850 IPR004107 Integrase, SAM-like, N-terminal DOO79_22850 IPR013762 Integrase-like, catalytic domain superfamily DOO79_22865 IPR005495 Permease LptG/LptF-related DOO79_22865 IPR030923 LPS export ABC transporter permease LptG DOO79_22875 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B DOO79_22875 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal DOO79_22875 IPR023042 Peptidase M17, leucine aminopeptidase DOO79_22875 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal DOO79_22890 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm DOO79_22890 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily DOO79_22890 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding DOO79_22890 IPR002303 Valine-tRNA ligase DOO79_22890 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DOO79_22890 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm DOO79_22890 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain DOO79_22890 IPR002300 Aminoacyl-tRNA synthetase, class Ia DOO79_22890 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOO79_22890 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding DOO79_22890 IPR033705 Valyl tRNA synthetase, anticodon-binding domain DOO79_22905 IPR000531 TonB-dependent receptor-like, beta-barrel DOO79_22905 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DOO79_22905 IPR010916 TonB box, conserved site DOO79_22905 IPR037066 TonB-dependent receptor, plug domain superfamily DOO79_22905 IPR039426 Vitamin B12 transporter BtuB-like DOO79_22905 IPR010101 TonB-dependent vitamin B12 transporter BtuB DOO79_22905 IPR010917 TonB-dependent receptor, conserved site DOO79_22905 IPR012910 TonB-dependent receptor, plug domain DOO79_22910 IPR008258 Transglycosylase SLT domain 1 DOO79_22910 IPR023346 Lysozyme-like domain superfamily DOO79_22915 IPR002022 Pectate lyase DOO79_22915 IPR012334 Pectin lyase fold DOO79_22915 IPR011050 Pectin lyase fold/virulence factor DOO79_22930 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase DOO79_22930 IPR000462 CDP-alcohol phosphatidyltransferase DOO79_22940 IPR006195 Aminoacyl-tRNA synthetase, class II DOO79_22940 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain DOO79_22940 IPR004154 Anticodon-binding DOO79_22940 IPR036621 Anticodon-binding domain superfamily DOO79_22940 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) DOO79_22940 IPR033730 Prokaryote proline-tRNA ligase core domain DOO79_22940 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 DOO79_22940 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily DOO79_22940 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type DOO79_22940 IPR002316 Proline-tRNA ligase, class IIa DOO79_22945 IPR027444 Histone-like protein H-NS, C-terminal domain DOO79_22945 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily DOO79_22945 IPR001801 Histone-like protein H-NS DOO79_22955 IPR030802 ABC transporter permease MalE DOO79_22955 IPR003453 ABC transport permease subunit MlaE, Proteobacteria DOO79_22960 IPR017871 ABC transporter, conserved site DOO79_22960 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl DOO79_22960 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_22960 IPR003439 ABC transporter-like DOO79_22960 IPR003593 AAA+ ATPase domain DOO79_22965 IPR005586 ABC-type transport auxiliary lipoprotein component DOO79_22965 IPR003399 Mce/MlaD DOO79_22980 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase DOO79_22980 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOO79_22980 IPR036188 FAD/NAD(P)-binding domain superfamily DOO79_22985 IPR007739 Rhamnan synthesis F DOO79_22985 IPR032719 Glycosyltransferase WbsX DOO79_22990 IPR004164 Coenzyme A transferase active site DOO79_22990 IPR037171 NagB/RpiA transferase-like DOO79_22990 IPR004165 Coenzyme A transferase family I DOO79_22990 IPR012791 3-oxoacid CoA-transferase, subunit B DOO79_22995 IPR037171 NagB/RpiA transferase-like DOO79_22995 IPR012792 3-oxoacid CoA-transferase, subunit A DOO79_22995 IPR004163 Coenzyme A transferase binding site DOO79_22995 IPR004165 Coenzyme A transferase family I DOO79_23000 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III DOO79_23000 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I DOO79_23000 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II DOO79_23000 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III DOO79_23000 IPR005841 Alpha-D-phosphohexomutase superfamily DOO79_23000 IPR016066 Alpha-D-phosphohexomutase, conserved site DOO79_23000 IPR005843 Alpha-D-phosphohexomutase, C-terminal DOO79_23000 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily DOO79_23005 IPR005835 Nucleotidyl transferase domain DOO79_23005 IPR011051 RmlC-like cupin domain superfamily DOO79_23005 IPR014710 RmlC-like jelly roll fold DOO79_23005 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase DOO79_23005 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal DOO79_23005 IPR029044 Nucleotide-diphospho-sugar transferases DOO79_23010 IPR036291 NAD(P)-binding domain superfamily DOO79_23010 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOO79_23010 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type DOO79_23010 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal DOO79_23010 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation DOO79_23010 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily DOO79_23010 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal DOO79_23010 IPR017476 UDP-glucose/GDP-mannose dehydrogenase DOO79_23015 IPR005913 dTDP-4-dehydrorhamnose reductase family DOO79_23015 IPR029903 RmlD-like substrate binding domain DOO79_23015 IPR036291 NAD(P)-binding domain superfamily DOO79_23020 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related DOO79_23020 IPR014710 RmlC-like jelly roll fold DOO79_23020 IPR011051 RmlC-like cupin domain superfamily DOO79_23025 IPR029044 Nucleotide-diphospho-sugar transferases DOO79_23025 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form DOO79_23025 IPR005835 Nucleotidyl transferase domain DOO79_23030 IPR016040 NAD(P)-binding domain DOO79_23030 IPR005888 dTDP-glucose 4,6-dehydratase DOO79_23030 IPR036291 NAD(P)-binding domain superfamily DOO79_23035 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOO79_23035 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal DOO79_23035 IPR012255 Electron transfer flavoprotein, beta subunit DOO79_23035 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal DOO79_23035 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site DOO79_23040 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site DOO79_23040 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal DOO79_23040 IPR029035 DHS-like NAD/FAD-binding domain superfamily DOO79_23040 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal DOO79_23040 IPR001308 Electron transfer flavoprotein alpha subunit/FixB DOO79_23040 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOO79_23040 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal DOO79_23050 IPR039653 Prenyltransferase DOO79_23050 IPR023214 HAD superfamily DOO79_23050 IPR036412 HAD-like superfamily DOO79_23050 IPR000537 UbiA prenyltransferase family DOO79_23055 IPR016167 FAD-binding, type PCMH, subdomain 1 DOO79_23055 IPR007173 D-arabinono-1,4-lactone oxidase DOO79_23055 IPR016166 FAD-binding domain, PCMH-type DOO79_23055 IPR036318 FAD-binding, type PCMH-like superfamily DOO79_23055 IPR006094 FAD linked oxidase, N-terminal DOO79_23055 IPR016169 FAD-binding, type PCMH, subdomain 2 DOO79_23070 IPR036291 NAD(P)-binding domain superfamily DOO79_23070 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase DOO79_23070 IPR001509 NAD-dependent epimerase/dehydratase DOO79_23120 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_23120 IPR017871 ABC transporter, conserved site DOO79_23120 IPR003439 ABC transporter-like DOO79_23120 IPR003593 AAA+ ATPase domain DOO79_23200 IPR010985 Ribbon-helix-helix DOO79_23200 IPR013321 Arc-type ribbon-helix-helix DOO79_23210 IPR004027 SEC-C motif DOO79_23210 IPR011978 Uncharacterised protein family UPF0149 DOO79_23210 IPR036255 YgfB-like superfamily DOO79_23255 IPR009444 Conjugal transfer, TraD, alpha-type DOO79_23260 IPR012930 TraC-like DOO79_23265 IPR014136 Ti-type conjugative transfer relaxase TraA DOO79_23265 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_23265 IPR041533 Bartonella effector protein, BID domain DOO79_23265 IPR027351 (+) RNA virus helicase core domain DOO79_23265 IPR005053 MobA/MobL protein DOO79_23280 IPR001478 PDZ domain DOO79_23280 IPR036034 PDZ superfamily DOO79_23280 IPR009003 Peptidase S1, PA clan DOO79_23280 IPR011782 Peptidase S1C, Do DOO79_23280 IPR001940 Peptidase S1C DOO79_23300 IPR039052 Antitoxin PemI-like DOO79_23300 IPR037914 SpoVT-AbrB domain superfamily DOO79_23300 IPR007159 SpoVT-AbrB domain DOO79_23315 IPR008490 Transposase InsH, N-terminal DOO79_23320 IPR024089 Proline dehydrogenase PutA, domain I/II DOO79_23320 IPR016162 Aldehyde dehydrogenase, N-terminal DOO79_23320 IPR015590 Aldehyde dehydrogenase domain DOO79_23320 IPR024082 Proline dehydrogenase PutA, domain II DOO79_23320 IPR013321 Arc-type ribbon-helix-helix DOO79_23320 IPR025703 Bifunctional protein PutA DOO79_23320 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 DOO79_23320 IPR002872 Proline dehydrogenase domain DOO79_23320 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain DOO79_23320 IPR024090 Proline dehydrogenase PutA, domain I DOO79_23320 IPR010985 Ribbon-helix-helix DOO79_23320 IPR029041 FAD-linked oxidoreductase-like DOO79_23320 IPR016161 Aldehyde/histidinol dehydrogenase DOO79_23320 IPR016163 Aldehyde dehydrogenase, C-terminal DOO79_23320 IPR016160 Aldehyde dehydrogenase, cysteine active site DOO79_23320 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DOO79_23345 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOO79_23345 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site DOO79_23345 IPR001525 C-5 cytosine methyltransferase DOO79_23345 IPR018117 DNA methylase, C-5 cytosine-specific, active site DOO79_23365 IPR025296 Domain of unknown function DUF4158 DOO79_23365 IPR002513 Tn3 transposase DDE domain DOO79_23395 IPR025669 AAA domain DOO79_23395 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_23410 IPR006119 Resolvase, N-terminal catalytic domain DOO79_23410 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily DOO79_23410 IPR006120 Resolvase, HTH domain DOO79_23410 IPR006118 Recombinase, conserved site DOO79_23455 IPR021139 NYN domain, limkain-b1-type DOO79_23455 IPR024467 Domain of unknown function DUF2384 DOO79_23520 IPR010985 Ribbon-helix-helix DOO79_23520 IPR029041 FAD-linked oxidoreductase-like DOO79_23520 IPR013321 Arc-type ribbon-helix-helix DOO79_23520 IPR015590 Aldehyde dehydrogenase domain DOO79_23520 IPR002872 Proline dehydrogenase domain DOO79_23520 IPR016162 Aldehyde dehydrogenase, N-terminal DOO79_23520 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 DOO79_23520 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain DOO79_23520 IPR024090 Proline dehydrogenase PutA, domain I DOO79_23520 IPR016160 Aldehyde dehydrogenase, cysteine active site DOO79_23520 IPR016163 Aldehyde dehydrogenase, C-terminal DOO79_23520 IPR016161 Aldehyde/histidinol dehydrogenase DOO79_23520 IPR024089 Proline dehydrogenase PutA, domain I/II DOO79_23520 IPR024082 Proline dehydrogenase PutA, domain II DOO79_23520 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DOO79_23520 IPR025703 Bifunctional protein PutA DOO79_23535 IPR004027 SEC-C motif DOO79_23535 IPR036255 YgfB-like superfamily DOO79_23535 IPR011978 Uncharacterised protein family UPF0149 DOO79_23555 IPR036231 Avirulence B/C superfamily DOO79_23555 IPR008798 Avirulence B/C DOO79_23730 IPR007688 Plasmid conjugal transfer TrbL/VirB6 DOO79_23740 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily DOO79_23740 IPR014148 P-type conjugative transfer protein VirB9 DOO79_23740 IPR033645 VirB9/CagX/TrbG, C-terminal DOO79_23740 IPR010258 Conjugal transfer, TrbG/VirB9/CagX DOO79_23745 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI DOO79_23745 IPR042217 Type IV secretion system, VirB10/TrbI DOO79_23750 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DOO79_23750 IPR014155 Type IV secretion system protein VirB11 DOO79_23750 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_23750 IPR001482 Type II/IV secretion system protein DOO79_23755 IPR008258 Transglycosylase SLT domain 1 DOO79_23755 IPR023346 Lysozyme-like domain superfamily DOO79_23780 IPR014862 TrwC relaxase DOO79_23780 IPR040668 TraI, 2B/2B-like domain DOO79_23780 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_23780 IPR009767 DNA helicase, TraI type DOO79_23780 IPR014129 Conjugative transfer relaxase protein TraI DOO79_23780 IPR014059 Conjugative relaxase, N-terminal DOO79_23780 IPR040987 TraI, N-terminal subdomain DOO79_23840 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_23840 IPR009744 VirC1 DOO79_23895 IPR025669 AAA domain DOO79_23895 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOO79_23965 IPR010985 Ribbon-helix-helix DOO79_23965 IPR013321 Arc-type ribbon-helix-helix DOO79_23970 IPR002716 PIN domain DOO79_23970 IPR029060 PIN-like domain superfamily DOO79_23970 IPR022907 VapC family DOO79_23980 IPR004027 SEC-C motif DOO79_23980 IPR036255 YgfB-like superfamily DOO79_23980 IPR011978 Uncharacterised protein family UPF0149 DOO79_24025 IPR009444 Conjugal transfer, TraD, alpha-type