locus-tag class description CAB38_00025 PF00664 ABC transporter transmembrane region CAB38_00025 PF03412 Peptidase C39 family CAB38_00025 PF00005 ABC transporter CAB38_00030 PF03466 LysR substrate binding domain CAB38_00030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB38_00035 PF00664 ABC transporter transmembrane region CAB38_00035 PF00005 ABC transporter CAB38_00040 PF01205 Uncharacterized protein family UPF0029 CAB38_00045 PF03641 Possible lysine decarboxylase CAB38_00050 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAB38_00050 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CAB38_00055 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CAB38_00055 PF00364 Biotin-requiring enzyme CAB38_00055 PF02817 e3 binding domain CAB38_00060 PF16870 2-oxoglutarate dehydrogenase C-terminal CAB38_00060 PF16078 2-oxoglutarate dehydrogenase N-terminus CAB38_00060 PF02779 Transketolase, pyrimidine binding domain CAB38_00060 PF00676 Dehydrogenase E1 component CAB38_00070 PF08007 Cupin superfamily protein CAB38_00080 PF00206 Lyase CAB38_00080 PF08328 Adenylosuccinate lyase C-terminal CAB38_00090 PF01595 Cyclin M transmembrane N-terminal domain CAB38_00090 PF03471 Transporter associated domain CAB38_00090 PF00571 CBS domain CAB38_00095 PF00206 Lyase CAB38_00095 PF10415 Fumarase C C-terminus CAB38_00120 PF00005 ABC transporter CAB38_00125 PF00392 Bacterial regulatory proteins, gntR family CAB38_00135 PF00255 Glutathione peroxidase CAB38_00140 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CAB38_00140 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CAB38_00145 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CAB38_00145 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CAB38_00145 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CAB38_00150 PF04102 SlyX CAB38_00165 PF00356 Bacterial regulatory proteins, lacI family CAB38_00170 PF07690 Major Facilitator Superfamily CAB38_00175 PF00294 pfkB family carbohydrate kinase CAB38_00190 PF02607 B12 binding domain CAB38_00190 PF02310 B12 binding domain CAB38_00190 PF02574 Homocysteine S-methyltransferase CAB38_00190 PF02965 Vitamin B12 dependent methionine synthase, activation domain CAB38_00190 PF00809 Pterin binding enzyme CAB38_00195 PF02574 Homocysteine S-methyltransferase CAB38_00195 PF00809 Pterin binding enzyme CAB38_00200 PF01209 ubiE/COQ5 methyltransferase family CAB38_00205 PF02770 Acyl-CoA dehydrogenase, middle domain CAB38_00205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CAB38_00205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CAB38_00210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CAB38_00210 PF02770 Acyl-CoA dehydrogenase, middle domain CAB38_00210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CAB38_00230 PF00773 RNB domain CAB38_00230 PF17876 Cold shock domain CAB38_00230 PF08461 Ribonuclease R winged-helix domain CAB38_00230 PF00575 S1 RNA binding domain CAB38_00230 PF08206 Ribonuclease B OB domain CAB38_00240 PF08032 RNA 2'-O ribose methyltransferase substrate binding CAB38_00240 PF00588 SpoU rRNA Methylase family CAB38_00245 PF00990 Diguanylate cyclase, GGDEF domain CAB38_00245 PF07694 5TMR of 5TMR-LYT CAB38_00250 PF00929 Exonuclease CAB38_00260 PF01895 PhoU domain CAB38_00265 PF00005 ABC transporter CAB38_00270 PF00528 Binding-protein-dependent transport system inner membrane component CAB38_00275 PF00528 Binding-protein-dependent transport system inner membrane component CAB38_00280 PF12849 PBP superfamily domain CAB38_00285 PF12849 PBP superfamily domain CAB38_00305 PF01740 STAS domain CAB38_00305 PF00916 Sulfate permease family CAB38_00310 PF00730 HhH-GPD superfamily base excision DNA repair protein CAB38_00310 PF10576 Iron-sulfur binding domain of endonuclease III CAB38_00310 PF00633 Helix-hairpin-helix motif CAB38_00320 PF00378 Enoyl-CoA hydratase/isomerase CAB38_00325 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CAB38_00325 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CAB38_00330 PF00293 NUDIX domain CAB38_00335 PF00581 Rhodanese-like domain CAB38_00375 PF01170 Putative RNA methylase family UPF0020 CAB38_00375 PF02926 THUMP domain CAB38_00375 PF10672 S-adenosylmethionine-dependent methyltransferase CAB38_00380 PF01513 ATP-NAD kinase CAB38_00405 PF08411 Exonuclease C-terminal CAB38_00405 PF00929 Exonuclease CAB38_00415 PF01494 FAD binding domain CAB38_00420 PF00266 Aminotransferase class-V CAB38_00430 PF06052 3-hydroxyanthranilic acid dioxygenase CAB38_00435 PF00484 Carbonic anhydrase CAB38_00480 PF00196 Bacterial regulatory proteins, luxR family CAB38_00480 PF00072 Response regulator receiver domain CAB38_00500 PF04299 Putative FMN-binding domain CAB38_00520 PF01336 OB-fold nucleic acid binding domain CAB38_00520 PF00152 tRNA synthetases class II (D, K and N) CAB38_00530 PF01521 Iron-sulphur cluster biosynthesis CAB38_00535 PF01250 Ribosomal protein S6 CAB38_00540 PF01084 Ribosomal protein S18 CAB38_00545 PF01281 Ribosomal protein L9, N-terminal domain CAB38_00545 PF03948 Ribosomal protein L9, C-terminal domain CAB38_00550 PF02463 RecF/RecN/SMC N terminal domain CAB38_00555 PF04354 ZipA, C-terminal FtsZ-binding domain CAB38_00565 PF00155 Aminotransferase class I and II CAB38_00570 PF12826 Helix-hairpin-helix motif CAB38_00570 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CAB38_00570 PF03120 NAD-dependent DNA ligase OB-fold domain CAB38_00570 PF01653 NAD-dependent DNA ligase adenylation domain CAB38_00570 PF00533 BRCA1 C Terminus (BRCT) domain CAB38_00575 PF00152 tRNA synthetases class II (D, K and N) CAB38_00590 PF01008 Initiation factor 2 subunit family CAB38_00600 PF13360 PQQ-like domain CAB38_00610 PF17392 Urocanase C-terminal domain CAB38_00610 PF17391 Urocanase N-terminal domain CAB38_00610 PF01175 Urocanase Rossmann-like domain CAB38_00620 PF00221 Aromatic amino acid lyase CAB38_00625 PF07969 Amidohydrolase family CAB38_00640 PF07702 UTRA domain CAB38_00640 PF00392 Bacterial regulatory proteins, gntR family CAB38_00665 PF01794 Ferric reductase like transmembrane component CAB38_00670 PF00174 Oxidoreductase molybdopterin binding domain CAB38_00675 PF00266 Aminotransferase class-V CAB38_00680 PF01842 ACT domain CAB38_00680 PF00800 Prephenate dehydratase CAB38_00680 PF01817 Chorismate mutase type II CAB38_00685 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CAB38_00695 PF03544 Gram-negative bacterial TonB protein C-terminal CAB38_00700 PF02403 Seryl-tRNA synthetase N-terminal domain CAB38_00700 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CAB38_00705 PF02525 Flavodoxin-like fold CAB38_00710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB38_00710 PF03466 LysR substrate binding domain CAB38_00735 PF02203 Tar ligand binding domain homologue CAB38_00735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAB38_00735 PF00672 HAMP domain CAB38_00740 PF01494 FAD binding domain CAB38_00755 PF00512 His Kinase A (phospho-acceptor) domain CAB38_00755 PF00072 Response regulator receiver domain CAB38_00755 PF08448 PAS fold CAB38_00755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_00755 PF13188 PAS domain CAB38_00760 PF00512 His Kinase A (phospho-acceptor) domain CAB38_00760 PF00072 Response regulator receiver domain CAB38_00760 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CAB38_00760 PF00672 HAMP domain CAB38_00760 PF01627 Hpt domain CAB38_00760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_00770 PF06745 KaiC CAB38_00775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_00775 PF13426 PAS domain CAB38_00775 PF00072 Response regulator receiver domain CAB38_00785 PF03918 Cytochrome C biogenesis protein CAB38_00790 PF08534 Redoxin CAB38_00795 PF01578 Cytochrome C assembly protein CAB38_00795 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CAB38_00800 PF03100 CcmE CAB38_00810 PF01578 Cytochrome C assembly protein CAB38_00815 PF00082 Subtilase family CAB38_00825 PF04542 Sigma-70 region 2 CAB38_00825 PF08281 Sigma-70, region 4 CAB38_00840 PF00034 Cytochrome c CAB38_00855 PF05523 WxcM-like, C-terminal CAB38_00875 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CAB38_00880 PF01943 Polysaccharide biosynthesis protein CAB38_00885 PF00535 Glycosyl transferase family 2 CAB38_00900 PF08241 Methyltransferase domain CAB38_00940 PF00005 ABC transporter CAB38_00945 PF00005 ABC transporter CAB38_00945 PF00664 ABC transporter transmembrane region CAB38_00950 PF07690 Major Facilitator Superfamily CAB38_00955 PF00296 Luciferase-like monooxygenase CAB38_00970 PF01595 Cyclin M transmembrane N-terminal domain CAB38_00970 PF03471 Transporter associated domain CAB38_00970 PF00571 CBS domain CAB38_00985 PF01384 Phosphate transporter family CAB38_01000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_01000 PF00986 DNA gyrase B subunit, carboxyl terminus CAB38_01000 PF00204 DNA gyrase B CAB38_01000 PF01751 Toprim domain CAB38_01010 PF00117 Glutamine amidotransferase class-I CAB38_01010 PF06418 CTP synthase N-terminus CAB38_01015 PF00793 DAHP synthetase I family CAB38_01025 PF03952 Enolase, N-terminal domain CAB38_01025 PF00113 Enolase, C-terminal TIM barrel domain CAB38_01030 PF04977 Septum formation initiator CAB38_01035 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CAB38_01040 PF02542 YgbB family CAB38_01045 PF01142 tRNA pseudouridine synthase D (TruD) CAB38_01050 PF01713 Smr domain CAB38_01055 PF01975 Survival protein SurE CAB38_01065 PF09335 SNARE associated Golgi protein CAB38_01070 PF01476 LysM domain CAB38_01070 PF01551 Peptidase family M23 CAB38_01075 PF04430 Protein of unknown function (DUF498/DUF598) CAB38_01080 PF01985 CRS1 / YhbY (CRM) domain CAB38_01085 PF01728 FtsJ-like methyltransferase CAB38_01090 PF00004 ATPase family associated with various cellular activities (AAA) CAB38_01090 PF17862 AAA+ lid domain CAB38_01090 PF06480 FtsH Extracellular CAB38_01090 PF01434 Peptidase family M41 CAB38_01095 PF00809 Pterin binding enzyme CAB38_01105 PF17209 Hfq protein CAB38_01110 PF13167 GTP-binding GTPase N-terminal CAB38_01110 PF01926 50S ribosome-binding GTPase CAB38_01110 PF16360 GTP-binding GTPase Middle Region CAB38_01115 PF02464 Competence-damaged protein CAB38_01120 PF03109 ABC1 family CAB38_01125 PF00717 Peptidase S24-like CAB38_01125 PF01726 LexA DNA binding domain CAB38_01130 PF00154 recA bacterial DNA recombination protein CAB38_01140 PF02631 RecX family CAB38_01145 PF01411 tRNA synthetases class II (A) CAB38_01145 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CAB38_01145 PF02272 DHHA1 domain CAB38_01150 PF02599 Global regulator protein family CAB38_01165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAB38_01165 PF08447 PAS fold CAB38_01165 PF13426 PAS domain CAB38_01170 PF17954 Quercetinase C-terminal cupin domain CAB38_01170 PF02678 Pirin CAB38_01175 PF03466 LysR substrate binding domain CAB38_01175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB38_01200 PF08543 Phosphomethylpyrimidine kinase CAB38_01215 PF02562 PhoH-like protein CAB38_01215 PF13638 PIN domain CAB38_01220 PF00578 AhpC/TSA family CAB38_01235 PF00701 Dihydrodipicolinate synthetase family CAB38_01245 PF11953 Domain of unknown function (DUF3470) CAB38_01245 PF00037 4Fe-4S binding domain CAB38_01250 PF05035 2-keto-3-deoxy-galactonokinase CAB38_01255 PF08450 SMP-30/Gluconolactonase/LRE-like region CAB38_01260 PF13378 Enolase C-terminal domain-like CAB38_01260 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CAB38_01265 PF01081 KDPG and KHG aldolase CAB38_01275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB38_01275 PF03466 LysR substrate binding domain CAB38_01290 PF00942 Cellulose binding domain CAB38_01290 PF03442 Carbohydrate binding domain X2 CAB38_01305 PF17137 Domain of unknown function (DUF5110) CAB38_01305 PF01055 Glycosyl hydrolases family 31 CAB38_01305 PF16338 Domain of unknown function (DUF4968) CAB38_01315 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CAB38_01315 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CAB38_01325 PF00083 Sugar (and other) transporter CAB38_01345 PF01520 N-acetylmuramoyl-L-alanine amidase CAB38_01350 PF02649 Type I GTP cyclohydrolase folE2 CAB38_01360 PF12626 Polymerase A arginine-rich C-terminus CAB38_01360 PF01743 Poly A polymerase head domain CAB38_01360 PF12627 Probable RNA and SrmB- binding site of polymerase A CAB38_01365 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CAB38_01370 PF02548 Ketopantoate hydroxymethyltransferase CAB38_01375 PF02569 Pantoate-beta-alanine ligase CAB38_01380 PF02261 Aspartate decarboxylase CAB38_01385 PF00342 Phosphoglucose isomerase CAB38_01410 PF00933 Glycosyl hydrolase family 3 N terminal domain CAB38_01410 PF01915 Glycosyl hydrolase family 3 C-terminal domain CAB38_01410 PF14310 Fibronectin type III-like domain CAB38_01425 PF00360 Phytochrome region CAB38_01425 PF00990 Diguanylate cyclase, GGDEF domain CAB38_01425 PF01590 GAF domain CAB38_01425 PF00563 EAL domain CAB38_01435 PF02013 Cellulose or protein binding domain CAB38_01435 PF00150 Cellulase (glycosyl hydrolase family 5) CAB38_01440 PF00072 Response regulator receiver domain CAB38_01455 PF04551 GcpE protein CAB38_01460 PF01569 PAP2 superfamily CAB38_01475 PF07690 Major Facilitator Superfamily CAB38_01490 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CAB38_01490 PF01565 FAD binding domain CAB38_01495 PF01180 Dihydroorotate dehydrogenase CAB38_01515 PF00171 Aldehyde dehydrogenase family CAB38_01535 PF02534 Type IV secretory system Conjugative DNA transfer CAB38_01555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_01555 PF00183 Hsp90 protein CAB38_01565 PF01467 Cytidylyltransferase-like CAB38_01580 PF00037 4Fe-4S binding domain CAB38_01590 PF00759 Glycosyl hydrolase family 9 CAB38_01590 PF02927 Cellulase N-terminal ig-like domain CAB38_01635 PF02547 Queuosine biosynthesis protein CAB38_01640 PF01702 Queuine tRNA-ribosyltransferase CAB38_01645 PF02699 Preprotein translocase subunit CAB38_01650 PF07549 SecD/SecF GG Motif CAB38_01650 PF02355 Protein export membrane protein CAB38_01650 PF13721 SecD export protein N-terminal TM region CAB38_01655 PF02355 Protein export membrane protein CAB38_01655 PF07549 SecD/SecF GG Motif CAB38_01700 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CAB38_01705 PF00294 pfkB family carbohydrate kinase CAB38_01710 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CAB38_01710 PF05524 PEP-utilising enzyme, N-terminal CAB38_01710 PF02896 PEP-utilising enzyme, TIM barrel domain CAB38_01710 PF00391 PEP-utilising enzyme, mobile domain CAB38_01710 PF00381 PTS HPr component phosphorylation site CAB38_01715 PF00356 Bacterial regulatory proteins, lacI family CAB38_01725 PF00873 AcrB/AcrD/AcrF family CAB38_01730 PF00529 HlyD membrane-fusion protein of T1SS CAB38_01730 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CAB38_01740 PF05088 Bacterial NAD-glutamate dehydrogenase CAB38_01775 PF09335 SNARE associated Golgi protein CAB38_01780 PF01494 FAD binding domain CAB38_01790 PF00881 Nitroreductase family CAB38_01825 PF08241 Methyltransferase domain CAB38_01825 PF12697 Alpha/beta hydrolase family CAB38_01915 PF01431 Peptidase family M13 CAB38_01915 PF05649 Peptidase family M13 CAB38_01925 PF05649 Peptidase family M13 CAB38_01925 PF01431 Peptidase family M13 CAB38_01940 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CAB38_01950 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CAB38_01950 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAB38_01955 PF01266 FAD dependent oxidoreductase CAB38_01960 PF04235 Protein of unknown function (DUF418) CAB38_01965 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CAB38_01970 PF00877 NlpC/P60 family CAB38_01975 PF00877 NlpC/P60 family CAB38_01990 PF00375 Sodium:dicarboxylate symporter family CAB38_01995 PF00245 Alkaline phosphatase CAB38_02005 PF09179 TilS substrate binding domain CAB38_02005 PF11734 TilS substrate C-terminal domain CAB38_02005 PF01171 PP-loop family CAB38_02010 PF02609 Exonuclease VII small subunit CAB38_02015 PF00348 Polyprenyl synthetase CAB38_02045 PF03695 Uncharacterised protein family (UPF0149) CAB38_02045 PF02810 SEC-C motif CAB38_02060 PF01523 Putative modulator of DNA gyrase CAB38_02065 PF04751 Protein of unknown function (DUF615) CAB38_02070 PF01523 Putative modulator of DNA gyrase CAB38_02080 PF13502 AsmA-like C-terminal region CAB38_02080 PF13116 Protein of unknown function CAB38_02085 PF10150 Ribonuclease E/G family CAB38_02085 PF00575 S1 RNA binding domain CAB38_02090 PF02545 Maf-like protein CAB38_02095 PF04402 Protein of unknown function (DUF541) CAB38_02115 PF02590 Predicted SPOUT methyltransferase CAB38_02130 PF01467 Cytidylyltransferase-like CAB38_02145 PF08264 Anticodon-binding domain of tRNA CAB38_02145 PF13603 Leucyl-tRNA synthetase, Domain 2 CAB38_02145 PF00133 tRNA synthetases class I (I, L, M and V) CAB38_02155 PF00085 Thioredoxin CAB38_02195 PF04070 Domain of unknown function (DUF378) CAB38_02200 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CAB38_02210 PF03466 LysR substrate binding domain CAB38_02210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB38_02240 PF00005 ABC transporter CAB38_02240 PF00664 ABC transporter transmembrane region CAB38_02255 PF00873 AcrB/AcrD/AcrF family CAB38_02270 PF02321 Outer membrane efflux protein CAB38_02275 PF00486 Transcriptional regulatory protein, C terminal CAB38_02275 PF00072 Response regulator receiver domain CAB38_02280 PF00512 His Kinase A (phospho-acceptor) domain CAB38_02280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_02280 PF00672 HAMP domain CAB38_02285 PF00999 Sodium/hydrogen exchanger family CAB38_02290 PF00144 Beta-lactamase CAB38_02295 PF03737 Aldolase/RraA CAB38_02315 PF00072 Response regulator receiver domain CAB38_02315 PF00990 Diguanylate cyclase, GGDEF domain CAB38_02320 PF00849 RNA pseudouridylate synthase CAB38_02320 PF01479 S4 domain CAB38_02325 PF00563 EAL domain CAB38_02325 PF00990 Diguanylate cyclase, GGDEF domain CAB38_02325 PF08448 PAS fold CAB38_02330 PF03880 DbpA RNA binding domain CAB38_02330 PF00270 DEAD/DEAH box helicase CAB38_02330 PF00271 Helicase conserved C-terminal domain CAB38_02380 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CAB38_02380 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CAB38_02390 PF00654 Voltage gated chloride channel CAB38_02415 PF00593 TonB dependent receptor CAB38_02415 PF07715 TonB-dependent Receptor Plug Domain CAB38_02425 PF01483 Proprotein convertase P-domain CAB38_02425 PF00082 Subtilase family CAB38_02435 PF01483 Proprotein convertase P-domain CAB38_02435 PF00082 Subtilase family CAB38_02460 PF07690 Major Facilitator Superfamily CAB38_02465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB38_02465 PF03466 LysR substrate binding domain CAB38_02475 PF12833 Helix-turn-helix domain CAB38_02475 PF06719 AraC-type transcriptional regulator N-terminus CAB38_02490 PF02321 Outer membrane efflux protein CAB38_02495 PF00873 AcrB/AcrD/AcrF family CAB38_02500 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CAB38_02500 PF00529 HlyD membrane-fusion protein of T1SS CAB38_02510 PF01475 Ferric uptake regulator family CAB38_02515 PF00749 tRNA synthetases class I (E and Q), catalytic domain CAB38_02540 PF06123 Inner membrane protein CreD CAB38_02550 PF01790 Prolipoprotein diacylglyceryl transferase CAB38_02555 PF00512 His Kinase A (phospho-acceptor) domain CAB38_02555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_02555 PF00672 HAMP domain CAB38_02560 PF00072 Response regulator receiver domain CAB38_02560 PF00486 Transcriptional regulatory protein, C terminal CAB38_02565 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CAB38_02575 PF03461 TRCF domain CAB38_02575 PF02559 CarD-like/TRCF domain CAB38_02575 PF17757 UvrB interaction domain CAB38_02575 PF00271 Helicase conserved C-terminal domain CAB38_02575 PF00270 DEAD/DEAH box helicase CAB38_02585 PF09078 CheY binding CAB38_02585 PF02895 Signal transducing histidine kinase, homodimeric domain CAB38_02585 PF01627 Hpt domain CAB38_02585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_02585 PF01584 CheW-like domain CAB38_02590 PF00672 HAMP domain CAB38_02590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAB38_02590 PF02203 Tar ligand binding domain homologue CAB38_02595 PF01584 CheW-like domain CAB38_02600 PF00990 Diguanylate cyclase, GGDEF domain CAB38_02600 PF13426 PAS domain CAB38_02600 PF00563 EAL domain CAB38_02605 PF03705 CheR methyltransferase, all-alpha domain CAB38_02605 PF01739 CheR methyltransferase, SAM binding domain CAB38_02610 PF00072 Response regulator receiver domain CAB38_02610 PF01339 CheB methylesterase CAB38_02615 PF13091 PLD-like domain CAB38_02640 PF00300 Histidine phosphatase superfamily (branch 1) CAB38_02645 PF04493 Endonuclease V CAB38_02655 PF05726 Pirin C-terminal cupin domain CAB38_02655 PF02678 Pirin CAB38_02670 PF05726 Pirin C-terminal cupin domain CAB38_02670 PF02678 Pirin CAB38_02685 PF04328 Selenoprotein, putative CAB38_02735 PF02625 XdhC and CoxI family CAB38_02735 PF13478 XdhC Rossmann domain CAB38_02740 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CAB38_02740 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CAB38_02745 PF00941 FAD binding domain in molybdopterin dehydrogenase CAB38_02745 PF03450 CO dehydrogenase flavoprotein C-terminal domain CAB38_02750 PF10518 TAT (twin-arginine translocation) pathway signal sequence CAB38_02750 PF01799 [2Fe-2S] binding domain CAB38_02750 PF00111 2Fe-2S iron-sulfur cluster binding domain CAB38_02755 PF00107 Zinc-binding dehydrogenase CAB38_02755 PF08240 Alcohol dehydrogenase GroES-like domain CAB38_02755 PF08659 KR domain CAB38_02755 PF14765 Polyketide synthase dehydratase CAB38_02755 PF00698 Acyl transferase domain CAB38_02755 PF02801 Beta-ketoacyl synthase, C-terminal domain CAB38_02755 PF00550 Phosphopantetheine attachment site CAB38_02755 PF16197 Ketoacyl-synthetase C-terminal extension CAB38_02755 PF00109 Beta-ketoacyl synthase, N-terminal domain CAB38_02760 PF01590 GAF domain CAB38_02760 PF00360 Phytochrome region CAB38_02760 PF00990 Diguanylate cyclase, GGDEF domain CAB38_02760 PF00563 EAL domain CAB38_02765 PF00436 Single-strand binding protein family CAB38_02770 PF00348 Polyprenyl synthetase CAB38_02785 PF08245 Mur ligase middle domain CAB38_02785 PF02875 Mur ligase family, glutamate ligase domain CAB38_02800 PF00696 Amino acid kinase family CAB38_02800 PF01842 ACT domain CAB38_02805 PF02567 Phenazine biosynthesis-like protein CAB38_02810 PF02567 Phenazine biosynthesis-like protein CAB38_02820 PF02566 OsmC-like protein CAB38_02825 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CAB38_02825 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CAB38_02830 PF03652 Holliday junction resolvase CAB38_02835 PF02622 Uncharacterized ACR, COG1678 CAB38_02845 PF13673 Acetyltransferase (GNAT) domain CAB38_02845 PF00117 Glutamine amidotransferase class-I CAB38_02845 PF13302 Acetyltransferase (GNAT) domain CAB38_02845 PF03352 Methyladenine glycosylase CAB38_02845 PF00958 GMP synthase C terminal domain CAB38_02855 PF03211 Pectate lyase CAB38_02860 PF00437 Type II/IV secretion system protein CAB38_02865 PF00437 Type II/IV secretion system protein CAB38_02870 PF01168 Alanine racemase, N-terminal domain CAB38_02875 PF03807 NADP oxidoreductase coenzyme F420-dependent CAB38_02875 PF14748 Pyrroline-5-carboxylate reductase dimerisation CAB38_02885 PF01551 Peptidase family M23 CAB38_02905 PF01965 DJ-1/PfpI family CAB38_02915 PF02082 Transcriptional regulator CAB38_02920 PF01458 Uncharacterized protein family (UPF0051) CAB38_02925 PF00005 ABC transporter CAB38_02930 PF01458 Uncharacterized protein family (UPF0051) CAB38_02935 PF00266 Aminotransferase class-V CAB38_02945 PF00355 Rieske [2Fe-2S] domain CAB38_02950 PF00593 TonB dependent receptor CAB38_02950 PF07715 TonB-dependent Receptor Plug Domain CAB38_02955 PF13640 2OG-Fe(II) oxygenase superfamily CAB38_02955 PF18331 PKHD-type hydroxylase C-terminal domain CAB38_02980 PF02424 ApbE family CAB38_02985 PF00258 Flavodoxin CAB38_02985 PF00667 FAD binding domain CAB38_02985 PF00175 Oxidoreductase NAD-binding domain CAB38_03015 PF01636 Phosphotransferase enzyme family CAB38_03020 PF00483 Nucleotidyl transferase CAB38_03025 PF00308 Bacterial dnaA protein CAB38_03030 PF01594 AI-2E family transporter CAB38_03040 PF02769 AIR synthase related protein, C-terminal domain CAB38_03040 PF00586 AIR synthase related protein, N-terminal domain CAB38_03050 PF00551 Formyl transferase CAB38_03070 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CAB38_03075 PF01722 BolA-like protein CAB38_03080 PF01380 SIS domain CAB38_03080 PF00571 CBS domain CAB38_03095 PF03968 OstA-like protein CAB38_03100 PF00005 ABC transporter CAB38_03105 PF04963 Sigma-54 factor, core binding domain CAB38_03105 PF00309 Sigma-54 factor, Activator interacting domain (AID) CAB38_03105 PF04552 Sigma-54, DNA binding domain CAB38_03110 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CAB38_03115 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CAB38_03120 PF02603 HPr Serine kinase N terminus CAB38_03120 PF07475 HPr Serine kinase C-terminal domain CAB38_03125 PF03668 P-loop ATPase protein family CAB38_03135 PF00381 PTS HPr component phosphorylation site CAB38_03140 PF00391 PEP-utilising enzyme, mobile domain CAB38_03140 PF02896 PEP-utilising enzyme, TIM barrel domain CAB38_03140 PF05524 PEP-utilising enzyme, N-terminal CAB38_03150 PF00571 CBS domain CAB38_03150 PF01769 Divalent cation transporter CAB38_03150 PF03448 MgtE intracellular N domain CAB38_03155 PF00756 Putative esterase CAB38_03165 PF02322 Cytochrome bd terminal oxidase subunit II CAB38_03170 PF01654 Cytochrome bd terminal oxidase subunit I CAB38_03190 PF00324 Amino acid permease CAB38_03200 PF00544 Pectate lyase CAB38_03210 PF00561 alpha/beta hydrolase fold CAB38_03220 PF00196 Bacterial regulatory proteins, luxR family CAB38_03225 PF00324 Amino acid permease CAB38_03255 PF12706 Beta-lactamase superfamily domain CAB38_03275 PF09278 MerR, DNA binding CAB38_03275 PF00376 MerR family regulatory protein CAB38_03280 PF07690 Major Facilitator Superfamily CAB38_03290 PF03738 Glutathionylspermidine synthase preATP-grasp CAB38_03315 PF04012 PspA/IM30 family CAB38_03325 PF01243 Pyridoxamine 5'-phosphate oxidase CAB38_03325 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CAB38_03330 PF01202 Shikimate kinase CAB38_03335 PF01761 3-dehydroquinate synthase CAB38_03345 PF01208 Uroporphyrinogen decarboxylase (URO-D) CAB38_03350 PF07690 Major Facilitator Superfamily CAB38_03355 PF00672 HAMP domain CAB38_03355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_03355 PF00072 Response regulator receiver domain CAB38_03355 PF01627 Hpt domain CAB38_03355 PF17149 Periplasmic sensor domain found in signal transduction proteins CAB38_03355 PF00512 His Kinase A (phospho-acceptor) domain CAB38_03360 PF01627 Hpt domain CAB38_03360 PF00072 Response regulator receiver domain CAB38_03360 PF00512 His Kinase A (phospho-acceptor) domain CAB38_03360 PF17149 Periplasmic sensor domain found in signal transduction proteins CAB38_03360 PF00672 HAMP domain CAB38_03360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_03370 PF00512 His Kinase A (phospho-acceptor) domain CAB38_03370 PF01627 Hpt domain CAB38_03370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_03370 PF00072 Response regulator receiver domain CAB38_03375 PF04264 YceI-like domain CAB38_03395 PF03313 Serine dehydratase alpha chain CAB38_03395 PF03315 Serine dehydratase beta chain CAB38_03400 PF12697 Alpha/beta hydrolase family CAB38_03410 PF03447 Homoserine dehydrogenase, NAD binding domain CAB38_03410 PF00742 Homoserine dehydrogenase CAB38_03410 PF00696 Amino acid kinase family CAB38_03415 PF01053 Cys/Met metabolism PLP-dependent enzyme CAB38_03420 PF00561 alpha/beta hydrolase fold CAB38_03425 PF01476 LysM domain CAB38_03425 PF08525 Opacity-associated protein A N-terminal motif CAB38_03425 PF01551 Peptidase family M23 CAB38_03430 PF16658 Class II release factor RF3, C-terminal domain CAB38_03430 PF00009 Elongation factor Tu GTP binding domain CAB38_03435 PF03006 Haemolysin-III related CAB38_03440 PF05170 AsmA family CAB38_03445 PF00478 IMP dehydrogenase / GMP reductase domain CAB38_03445 PF00571 CBS domain CAB38_03450 PF00535 Glycosyl transferase family 2 CAB38_03455 PF00912 Transglycosylase CAB38_03460 PF01430 Hsp33 protein CAB38_03470 PF07715 TonB-dependent Receptor Plug Domain CAB38_03470 PF00593 TonB dependent receptor CAB38_03485 PF00440 Bacterial regulatory proteins, tetR family CAB38_03490 PF00561 alpha/beta hydrolase fold CAB38_03495 PF09317 Domain of unknown function (DUF1974) CAB38_03495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CAB38_03495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CAB38_03520 PF01597 Glycine cleavage H-protein CAB38_03525 PF01571 Aminomethyltransferase folate-binding domain CAB38_03525 PF08669 Glycine cleavage T-protein C-terminal barrel domain CAB38_03545 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CAB38_03550 PF03819 MazG nucleotide pyrophosphohydrolase domain CAB38_03555 PF00459 Inositol monophosphatase family CAB38_03560 PF00293 NUDIX domain CAB38_03565 PF00202 Aminotransferase class-III CAB38_03570 PF04452 RNA methyltransferase CAB38_03575 PF02685 Glucokinase CAB38_03590 PF00704 Glycosyl hydrolases family 18 CAB38_03590 PF01476 LysM domain CAB38_03605 PF14310 Fibronectin type III-like domain CAB38_03605 PF07691 PA14 domain CAB38_03605 PF01915 Glycosyl hydrolase family 3 C-terminal domain CAB38_03605 PF00933 Glycosyl hydrolase family 3 N terminal domain CAB38_03610 PF00005 ABC transporter CAB38_03610 PF03412 Peptidase C39 family CAB38_03610 PF00664 ABC transporter transmembrane region CAB38_03640 PF17678 Glycosyl hydrolase family 92 N-terminal domain CAB38_03640 PF07971 Glycosyl hydrolase family 92 CAB38_03645 PF01301 Glycosyl hydrolases family 35 CAB38_03680 PF03932 CutC family CAB38_03685 PF01112 Asparaginase CAB38_03700 PF13302 Acetyltransferase (GNAT) domain CAB38_03715 PF02895 Signal transducing histidine kinase, homodimeric domain CAB38_03715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_03715 PF01627 Hpt domain CAB38_03715 PF00072 Response regulator receiver domain CAB38_03715 PF01584 CheW-like domain CAB38_03720 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CAB38_03720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAB38_03725 PF01584 CheW-like domain CAB38_03730 PF00072 Response regulator receiver domain CAB38_03735 PF00072 Response regulator receiver domain CAB38_03740 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CAB38_03740 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CAB38_03750 PF03747 ADP-ribosylglycohydrolase CAB38_03755 PF00814 Glycoprotease family CAB38_03760 PF13307 Helicase C-terminal domain CAB38_03760 PF04851 Type III restriction enzyme, res subunit CAB38_03770 PF14814 Bifunctional transglycosylase second domain CAB38_03770 PF00905 Penicillin binding protein transpeptidase domain CAB38_03770 PF00912 Transglycosylase CAB38_03775 PF00535 Glycosyl transferase family 2 CAB38_03790 PF13291 ACT domain CAB38_03790 PF02824 TGS domain CAB38_03790 PF04607 Region found in RelA / SpoT proteins CAB38_03795 PF08042 PqqA family CAB38_03800 PF12706 Beta-lactamase superfamily domain CAB38_03805 PF03070 TENA/THI-4/PQQC family CAB38_03810 PF05402 Coenzyme PQQ synthesis protein D (PqqD) CAB38_03815 PF13186 Iron-sulfur cluster-binding domain CAB38_03815 PF04055 Radical SAM superfamily CAB38_03840 PF04408 Helicase associated domain (HA2) CAB38_03840 PF00270 DEAD/DEAH box helicase CAB38_03840 PF11898 Domain of unknown function (DUF3418) CAB38_03840 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CAB38_03840 PF00271 Helicase conserved C-terminal domain CAB38_03845 PF00210 Ferritin-like domain CAB38_03855 PF00271 Helicase conserved C-terminal domain CAB38_03855 PF00270 DEAD/DEAH box helicase CAB38_03855 PF00570 HRDC domain CAB38_03855 PF09382 RQC domain CAB38_03855 PF16124 RecQ zinc-binding CAB38_03890 PF02203 Tar ligand binding domain homologue CAB38_03890 PF00672 HAMP domain CAB38_03890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAB38_03910 PF07536 HWE histidine kinase CAB38_03910 PF13426 PAS domain CAB38_03910 PF13581 Histidine kinase-like ATPase domain CAB38_03915 PF06508 Queuosine biosynthesis protein QueC CAB38_03925 PF04055 Radical SAM superfamily CAB38_03935 PF00691 OmpA family CAB38_03940 PF04052 TolB amino-terminal domain CAB38_03940 PF07676 WD40-like Beta Propeller Repeat CAB38_03950 PF02472 Biopolymer transport protein ExbD/TolR CAB38_03955 PF01618 MotA/TolQ/ExbB proton channel family CAB38_03960 PF03061 Thioesterase superfamily CAB38_03965 PF05491 RuvB C-terminal winged helix domain CAB38_03965 PF17864 RuvB AAA lid domain CAB38_03965 PF05496 Holliday junction DNA helicase RuvB P-loop domain CAB38_03975 PF02705 K+ potassium transporter CAB38_03980 PF07499 RuvA, C-terminal domain CAB38_03980 PF01330 RuvA N terminal domain CAB38_03985 PF02075 Crossover junction endodeoxyribonuclease RuvC CAB38_03990 PF01709 Transcriptional regulator CAB38_04005 PF01336 OB-fold nucleic acid binding domain CAB38_04005 PF00152 tRNA synthetases class II (D, K and N) CAB38_04005 PF02938 GAD domain CAB38_04020 PF07690 Major Facilitator Superfamily CAB38_04035 PF05506 Domain of unknown function (DUF756) CAB38_04035 PF04185 Phosphoesterase family CAB38_04055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB38_04055 PF03466 LysR substrate binding domain CAB38_04065 PF12848 ABC transporter CAB38_04065 PF00005 ABC transporter CAB38_04070 PF00593 TonB dependent receptor CAB38_04070 PF07715 TonB-dependent Receptor Plug Domain CAB38_04085 PF07715 TonB-dependent Receptor Plug Domain CAB38_04085 PF00593 TonB dependent receptor CAB38_04090 PF00593 TonB dependent receptor CAB38_04090 PF07715 TonB-dependent Receptor Plug Domain CAB38_04095 PF00067 Cytochrome P450 CAB38_04105 PF00999 Sodium/hydrogen exchanger family CAB38_04105 PF02254 TrkA-N domain CAB38_04130 PF00593 TonB dependent receptor CAB38_04130 PF07660 Secretin and TonB N terminus short domain CAB38_04130 PF07715 TonB-dependent Receptor Plug Domain CAB38_04140 PF06276 Ferric iron reductase FhuF-like transporter CAB38_04140 PF04183 IucA / IucC family CAB38_04145 PF07690 Major Facilitator Superfamily CAB38_04155 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CAB38_04155 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CAB38_04185 PF02277 Phosphoribosyltransferase CAB38_04190 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CAB38_04195 PF07685 CobB/CobQ-like glutamine amidotransferase domain CAB38_04195 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CAB38_04200 PF00155 Aminotransferase class I and II CAB38_04210 PF12557 Cob(I)alamin adenosyltransferase N terminal CAB38_04210 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CAB38_04225 PF07715 TonB-dependent Receptor Plug Domain CAB38_04225 PF00593 TonB dependent receptor CAB38_04230 PF17871 AAA lid domain CAB38_04230 PF02861 Clp amino terminal domain, pathogenicity island component CAB38_04230 PF10431 C-terminal, D2-small domain, of ClpB protein CAB38_04230 PF07724 AAA domain (Cdc48 subfamily) CAB38_04230 PF00004 ATPase family associated with various cellular activities (AAA) CAB38_04235 PF00005 ABC transporter CAB38_04240 PF00528 Binding-protein-dependent transport system inner membrane component CAB38_04245 PF09084 NMT1/THI5 like CAB38_04255 PF00296 Luciferase-like monooxygenase CAB38_04260 PF00593 TonB dependent receptor CAB38_04260 PF07715 TonB-dependent Receptor Plug Domain CAB38_04270 PF01541 GIY-YIG catalytic domain CAB38_04305 PF00593 TonB dependent receptor CAB38_04305 PF07715 TonB-dependent Receptor Plug Domain CAB38_04315 PF02358 Trehalose-phosphatase CAB38_04320 PF00723 Glycosyl hydrolases family 15 CAB38_04325 PF00982 Glycosyltransferase family 20 CAB38_04330 PF01011 PQQ enzyme repeat CAB38_04340 PF00672 HAMP domain CAB38_04340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAB38_04340 PF02203 Tar ligand binding domain homologue CAB38_04345 PF04134 Protein of unknown function, DUF393 CAB38_04360 PF00849 RNA pseudouridylate synthase CAB38_04365 PF13525 Outer membrane lipoprotein CAB38_04375 PF02540 NAD synthase CAB38_04375 PF00795 Carbon-nitrogen hydrolase CAB38_04385 PF00549 CoA-ligase CAB38_04385 PF02629 CoA binding domain CAB38_04390 PF08442 ATP-grasp domain CAB38_04390 PF00549 CoA-ligase CAB38_04395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_04395 PF00512 His Kinase A (phospho-acceptor) domain CAB38_04400 PF00158 Sigma-54 interaction domain CAB38_04400 PF00072 Response regulator receiver domain CAB38_04400 PF02954 Bacterial regulatory protein, Fis family CAB38_04410 PF00437 Type II/IV secretion system protein CAB38_04410 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CAB38_04420 PF00437 Type II/IV secretion system protein CAB38_04420 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CAB38_04425 PF00114 Pilin (bacterial filament) CAB38_04425 PF07963 Prokaryotic N-terminal methylation motif CAB38_04430 PF00114 Pilin (bacterial filament) CAB38_04430 PF07963 Prokaryotic N-terminal methylation motif CAB38_04435 PF00482 Type II secretion system (T2SS), protein F CAB38_04440 PF01478 Type IV leader peptidase family CAB38_04440 PF06750 Bacterial Peptidase A24 N-terminal domain CAB38_04445 PF01121 Dephospho-CoA kinase CAB38_04485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_04485 PF00512 His Kinase A (phospho-acceptor) domain CAB38_04485 PF00989 PAS fold CAB38_04485 PF16736 Single Cache-like CAB38_04490 PF00486 Transcriptional regulatory protein, C terminal CAB38_04490 PF00072 Response regulator receiver domain CAB38_04500 PF18030 RimK PreATP-grasp domain CAB38_04500 PF08443 RimK-like ATP-grasp domain CAB38_04505 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CAB38_04505 PF00128 Alpha amylase, catalytic domain CAB38_04535 PF00657 GDSL-like Lipase/Acylhydrolase CAB38_04535 PF03797 Autotransporter beta-domain CAB38_04545 PF05690 Thiazole biosynthesis protein ThiG CAB38_04555 PF02390 Putative methyltransferase CAB38_04560 PF03600 Citrate transporter CAB38_04560 PF02080 TrkA-C domain CAB38_04580 PF01557 Fumarylacetoacetate (FAA) hydrolase family CAB38_04585 PF01741 Large-conductance mechanosensitive channel, MscL CAB38_04595 PF00356 Bacterial regulatory proteins, lacI family CAB38_04605 PF00703 Glycosyl hydrolases family 2 CAB38_04605 PF02837 Glycosyl hydrolases family 2, sugar binding domain CAB38_04605 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain CAB38_04610 PF10566 Glycoside hydrolase 97 CAB38_04610 PF14508 Glycosyl-hydrolase 97 N-terminal CAB38_04610 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation CAB38_04620 PF00135 Carboxylesterase family CAB38_04625 PF00588 SpoU rRNA Methylase family CAB38_04625 PF08032 RNA 2'-O ribose methyltransferase substrate binding CAB38_04675 PF00873 AcrB/AcrD/AcrF family CAB38_04680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CAB38_04680 PF00529 HlyD membrane-fusion protein of T1SS CAB38_04685 PF00009 Elongation factor Tu GTP binding domain CAB38_04690 PF01507 Phosphoadenosine phosphosulfate reductase family CAB38_04700 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CAB38_04700 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CAB38_04705 PF01507 Phosphoadenosine phosphosulfate reductase family CAB38_04725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_04725 PF00072 Response regulator receiver domain CAB38_04725 PF01627 Hpt domain CAB38_04725 PF00512 His Kinase A (phospho-acceptor) domain CAB38_04740 PF03466 LysR substrate binding domain CAB38_04740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB38_04745 PF14824 Sirohaem biosynthesis protein central CAB38_04745 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CAB38_04745 PF10414 Sirohaem synthase dimerisation region CAB38_04750 PF00291 Pyridoxal-phosphate dependent enzyme CAB38_04760 PF01661 Macro domain CAB38_04765 PF00274 Fructose-bisphosphate aldolase class-I CAB38_04770 PF00224 Pyruvate kinase, barrel domain CAB38_04770 PF02887 Pyruvate kinase, alpha/beta domain CAB38_04780 PF00162 Phosphoglycerate kinase CAB38_04805 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CAB38_04805 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CAB38_04855 PF03389 MobA/MobL family CAB38_04900 PF04221 RelB antitoxin CAB38_04905 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ CAB38_04910 PF00589 Phage integrase family CAB38_04920 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CAB38_04920 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CAB38_04930 PF00171 Aldehyde dehydrogenase family CAB38_04935 PF01472 PUA domain CAB38_04935 PF00696 Amino acid kinase family CAB38_04945 PF00206 Lyase CAB38_04950 PF01118 Semialdehyde dehydrogenase, NAD binding domain CAB38_04960 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase CAB38_04960 PF00696 Amino acid kinase family CAB38_04965 PF01546 Peptidase family M20/M25/M40 CAB38_04965 PF07687 Peptidase dimerisation domain CAB38_04975 PF00764 Arginosuccinate synthase CAB38_04980 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CAB38_04980 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CAB38_04990 PF09190 DALR domain CAB38_04990 PF01406 tRNA synthetases class I (C) catalytic domain CAB38_04995 PF02657 Fe-S metabolism associated domain CAB38_05005 PF01258 Prokaryotic dksA/traR C4-type zinc finger CAB38_05010 PF01809 Putative membrane protein insertion efficiency factor CAB38_05015 PF01979 Amidohydrolase family CAB38_05040 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CAB38_05045 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CAB38_05055 PF00753 Metallo-beta-lactamase superfamily CAB38_05100 PF00295 Glycosyl hydrolases family 28 CAB38_05110 PF13419 Haloacid dehalogenase-like hydrolase CAB38_05120 PF01979 Amidohydrolase family CAB38_05130 PF08207 Elongation factor P (EF-P) KOW-like domain CAB38_05130 PF01132 Elongation factor P (EF-P) OB domain CAB38_05130 PF09285 Elongation factor P, C-terminal CAB38_05135 PF04055 Radical SAM superfamily CAB38_05140 PF00563 EAL domain CAB38_05140 PF13188 PAS domain CAB38_05140 PF03707 Bacterial signalling protein N terminal repeat CAB38_05140 PF00990 Diguanylate cyclase, GGDEF domain CAB38_05150 PF00588 SpoU rRNA Methylase family CAB38_05155 PF00459 Inositol monophosphatase family CAB38_05160 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CAB38_05160 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CAB38_05165 PF00545 ribonuclease CAB38_05185 PF00271 Helicase conserved C-terminal domain CAB38_05185 PF03880 DbpA RNA binding domain CAB38_05185 PF00270 DEAD/DEAH box helicase CAB38_05190 PF00156 Phosphoribosyl transferase domain CAB38_05195 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CAB38_05200 PF00135 Carboxylesterase family CAB38_05205 PF02798 Glutathione S-transferase, N-terminal domain CAB38_05205 PF14497 Glutathione S-transferase, C-terminal domain CAB38_05210 PF00313 'Cold-shock' DNA-binding domain CAB38_05215 PF07152 YaeQ protein CAB38_05275 PF00929 Exonuclease CAB38_05280 PF14437 MafB19-like deaminase CAB38_05285 PF02742 Iron dependent repressor, metal binding and dimerisation domain CAB38_05285 PF01325 Iron dependent repressor, N-terminal DNA binding domain CAB38_05290 PF01566 Natural resistance-associated macrophage protein CAB38_05295 PF00561 alpha/beta hydrolase fold CAB38_05310 PF05977 Transmembrane secretion effector CAB38_05335 PF00857 Isochorismatase family CAB38_05350 PF00196 Bacterial regulatory proteins, luxR family CAB38_05350 PF00072 Response regulator receiver domain CAB38_05370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB38_05370 PF03466 LysR substrate binding domain CAB38_05375 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CAB38_05375 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus CAB38_05375 PF00361 Proton-conducting membrane transporter CAB38_05380 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) CAB38_05385 PF00117 Glutamine amidotransferase class-I CAB38_05385 PF02540 NAD synthase CAB38_05385 PF00958 GMP synthase C terminal domain CAB38_05390 PF00478 IMP dehydrogenase / GMP reductase domain CAB38_05390 PF00571 CBS domain CAB38_05395 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CAB38_05395 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CAB38_05405 PF00999 Sodium/hydrogen exchanger family CAB38_05405 PF02254 TrkA-N domain CAB38_05415 PF00483 Nucleotidyl transferase CAB38_05420 PF02719 Polysaccharide biosynthesis protein CAB38_05425 PF00953 Glycosyl transferase family 4 CAB38_05430 PF18073 Rubredoxin metal binding domain CAB38_05440 PF00216 Bacterial DNA-binding protein CAB38_05445 PF00575 S1 RNA binding domain CAB38_05450 PF02224 Cytidylate kinase CAB38_05455 PF00444 Ribosomal protein L36 CAB38_05470 PF04371 Porphyromonas-type peptidyl-arginine deiminase CAB38_05475 PF00795 Carbon-nitrogen hydrolase CAB38_05500 PF00528 Binding-protein-dependent transport system inner membrane component CAB38_05505 PF00528 Binding-protein-dependent transport system inner membrane component CAB38_05525 PF00356 Bacterial regulatory proteins, lacI family CAB38_05535 PF03795 YCII-related domain CAB38_05540 PF02616 Segregation and condensation protein ScpA CAB38_05545 PF04079 Segregation and condensation complex subunit ScpB CAB38_05550 PF01479 S4 domain CAB38_05550 PF00849 RNA pseudouridylate synthase CAB38_05565 PF00795 Carbon-nitrogen hydrolase CAB38_05570 PF00155 Aminotransferase class I and II CAB38_05575 PF00005 ABC transporter CAB38_05580 PF03379 CcmB protein CAB38_05585 PF01578 Cytochrome C assembly protein CAB38_05595 PF03100 CcmE CAB38_05600 PF01578 Cytochrome C assembly protein CAB38_05600 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CAB38_05605 PF08534 Redoxin CAB38_05610 PF03918 Cytochrome C biogenesis protein CAB38_05620 PF00561 alpha/beta hydrolase fold CAB38_05625 PF00313 'Cold-shock' DNA-binding domain CAB38_05630 PF00664 ABC transporter transmembrane region CAB38_05630 PF00005 ABC transporter CAB38_05635 PF00664 ABC transporter transmembrane region CAB38_05635 PF00005 ABC transporter CAB38_05640 PF01654 Cytochrome bd terminal oxidase subunit I CAB38_05655 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CAB38_05665 PF05598 Transposase domain (DUF772) CAB38_05670 PF01420 Type I restriction modification DNA specificity domain CAB38_05700 PF00440 Bacterial regulatory proteins, tetR family CAB38_05715 PF11838 ERAP1-like C-terminal domain CAB38_05715 PF01433 Peptidase family M1 domain CAB38_05720 PF00709 Adenylosuccinate synthetase CAB38_05730 PF01145 SPFH domain / Band 7 family CAB38_05735 PF12221 Bacterial membrane protein N terminal CAB38_05735 PF01145 SPFH domain / Band 7 family CAB38_05740 PF00072 Response regulator receiver domain CAB38_05745 PF00226 DnaJ domain CAB38_05745 PF01556 DnaJ C terminal domain CAB38_05755 PF08534 Redoxin CAB38_05765 PF00912 Transglycosylase CAB38_05765 PF00905 Penicillin binding protein transpeptidase domain CAB38_05765 PF06832 Penicillin-Binding Protein C-terminus Family CAB38_05785 PF00207 Alpha-2-macroglobulin family CAB38_05785 PF07703 Alpha-2-macroglobulin bait region domain CAB38_05785 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain CAB38_05785 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain CAB38_05785 PF11974 Bacterial alpha-2-macroglobulin MG3 domain CAB38_05785 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain CAB38_05785 PF17962 Bacterial macroglobulin domain 6 CAB38_05785 PF01835 MG2 domain CAB38_05800 PF00593 TonB dependent receptor CAB38_05800 PF07715 TonB-dependent Receptor Plug Domain CAB38_05805 PF04303 PrpF protein CAB38_05820 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH CAB38_05825 PF00694 Aconitase C-terminal domain CAB38_05825 PF00330 Aconitase family (aconitate hydratase) CAB38_05830 PF00285 Citrate synthase, C-terminal domain CAB38_05840 PF06506 Propionate catabolism activator CAB38_05840 PF02954 Bacterial regulatory protein, Fis family CAB38_05840 PF00158 Sigma-54 interaction domain CAB38_05860 PF09115 DNA polymerase III, delta subunit, C terminal CAB38_05865 PF02618 YceG-like family CAB38_05870 PF04715 Anthranilate synthase component I, N terminal region CAB38_05870 PF00425 chorismate binding enzyme CAB38_05875 PF02801 Beta-ketoacyl synthase, C-terminal domain CAB38_05875 PF00109 Beta-ketoacyl synthase, N-terminal domain CAB38_05880 PF00550 Phosphopantetheine attachment site CAB38_05890 PF00698 Acyl transferase domain CAB38_05900 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CAB38_05900 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CAB38_05905 PF01783 Ribosomal L32p protein family CAB38_05910 PF02620 Large ribosomal RNA subunit accumulation protein YceD CAB38_05915 PF02545 Maf-like protein CAB38_05960 PF07715 TonB-dependent Receptor Plug Domain CAB38_05960 PF00593 TonB dependent receptor CAB38_06000 PF13520 Amino acid permease CAB38_06020 PF00557 Metallopeptidase family M24 CAB38_06020 PF01321 Creatinase/Prolidase N-terminal domain CAB38_06025 PF00171 Aldehyde dehydrogenase family CAB38_06030 PF00701 Dihydrodipicolinate synthetase family CAB38_06035 PF04324 BFD-like [2Fe-2S] binding domain CAB38_06035 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAB38_06045 PF01266 FAD dependent oxidoreductase CAB38_06050 PF05544 Proline racemase CAB38_06060 PF00448 SRP54-type protein, GTPase domain CAB38_06060 PF02881 SRP54-type protein, helical bundle domain CAB38_06070 PF00730 HhH-GPD superfamily base excision DNA repair protein CAB38_06070 PF00633 Helix-hairpin-helix motif CAB38_06070 PF10576 Iron-sulfur binding domain of endonuclease III CAB38_06070 PF14815 NUDIX domain CAB38_06075 PF04362 Bacterial Fe(2+) trafficking CAB38_06080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_06080 PF13426 PAS domain CAB38_06080 PF00072 Response regulator receiver domain CAB38_06125 PF08212 Lipocalin-like domain CAB38_06140 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CAB38_06140 PF12806 Acetyl-CoA dehydrogenase C-terminal like CAB38_06140 PF02770 Acyl-CoA dehydrogenase, middle domain CAB38_06140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CAB38_06150 PF02780 Transketolase, C-terminal domain CAB38_06150 PF02779 Transketolase, pyrimidine binding domain CAB38_06150 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CAB38_06170 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family CAB38_06175 PF00753 Metallo-beta-lactamase superfamily CAB38_06175 PF16123 Hydroxyacylglutathione hydrolase C-terminus CAB38_06180 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CAB38_06180 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CAB38_06195 PF03808 Glycosyl transferase WecB/TagA/CpsF family CAB38_06210 PF14667 Polysaccharide biosynthesis C-terminal domain CAB38_06220 PF13439 Glycosyltransferase Family 4 CAB38_06220 PF00534 Glycosyl transferases group 1 CAB38_06240 PF02397 Bacterial sugar transferase CAB38_06260 PF13411 MerR HTH family regulatory protein CAB38_06265 PF00216 Bacterial DNA-binding protein CAB38_06270 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CAB38_06270 PF01588 Putative tRNA binding domain CAB38_06270 PF03147 Ferredoxin-fold anticodon binding domain CAB38_06270 PF03484 tRNA synthetase B5 domain CAB38_06270 PF03483 B3/4 domain CAB38_06275 PF01409 tRNA synthetases class II core domain (F) CAB38_06275 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CAB38_06280 PF00453 Ribosomal protein L20 CAB38_06285 PF01632 Ribosomal protein L35 CAB38_06290 PF05198 Translation initiation factor IF-3, N-terminal domain CAB38_06290 PF00707 Translation initiation factor IF-3, C-terminal domain CAB38_06295 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CAB38_06295 PF03129 Anticodon binding domain CAB38_06295 PF02824 TGS domain CAB38_06295 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CAB38_06300 PF00356 Bacterial regulatory proteins, lacI family CAB38_06345 PF03135 CagE, TrbE, VirB family, component of type IV transporter system CAB38_06365 PF03743 Bacterial conjugation TrbI-like protein CAB38_06385 PF02534 Type IV secretory system Conjugative DNA transfer CAB38_06400 PF04851 Type III restriction enzyme, res subunit CAB38_06400 PF17757 UvrB interaction domain CAB38_06400 PF12344 Ultra-violet resistance protein B CAB38_06400 PF00271 Helicase conserved C-terminal domain CAB38_06400 PF02151 UvrB/uvrC motif CAB38_06435 PF05567 Neisseria PilC beta-propeller domain CAB38_06455 PF07963 Prokaryotic N-terminal methylation motif CAB38_06455 PF00114 Pilin (bacterial filament) CAB38_06460 PF03641 Possible lysine decarboxylase CAB38_06460 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases CAB38_06460 PF11892 Domain of unknown function (DUF3412) CAB38_06465 PF00593 TonB dependent receptor CAB38_06475 PF01914 MarC family integral membrane protein CAB38_06485 PF00462 Glutaredoxin CAB38_06490 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CAB38_06490 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CAB38_06495 PF02222 ATP-grasp domain CAB38_06495 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CAB38_06500 PF00731 AIR carboxylase CAB38_06510 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CAB38_06510 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CAB38_06520 PF00575 S1 RNA binding domain CAB38_06520 PF01138 3' exoribonuclease family, domain 1 CAB38_06520 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CAB38_06520 PF00013 KH domain CAB38_06520 PF03725 3' exoribonuclease family, domain 2 CAB38_06525 PF00312 Ribosomal protein S15 CAB38_06530 PF16198 tRNA pseudouridylate synthase B C-terminal domain CAB38_06530 PF01509 TruB family pseudouridylate synthase (N terminal domain) CAB38_06530 PF09157 Pseudouridine synthase II TruB, C-terminal CAB38_06535 PF02033 Ribosome-binding factor A CAB38_06540 PF11987 Translation-initiation factor 2 CAB38_06540 PF00009 Elongation factor Tu GTP binding domain CAB38_06540 PF08364 Bacterial translation initiation factor IF-2 associated region CAB38_06540 PF04760 Translation initiation factor IF-2, N-terminal region CAB38_06545 PF13184 NusA-like KH domain CAB38_06545 PF08529 NusA N-terminal domain CAB38_06545 PF00575 S1 RNA binding domain CAB38_06550 PF02576 RimP N-terminal domain CAB38_06550 PF17384 RimP C-terminal SH3 domain CAB38_06560 PF00361 Proton-conducting membrane transporter CAB38_06565 PF00361 Proton-conducting membrane transporter CAB38_06565 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus CAB38_06570 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CAB38_06570 PF00361 Proton-conducting membrane transporter CAB38_06575 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CAB38_06580 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CAB38_06585 PF12838 4Fe-4S dicluster domain CAB38_06590 PF00146 NADH dehydrogenase CAB38_06595 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal CAB38_06595 PF00384 Molybdopterin oxidoreductase CAB38_06595 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CAB38_06600 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CAB38_06600 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CAB38_06600 PF10531 SLBB domain CAB38_06610 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CAB38_06615 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CAB38_06620 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CAB38_06625 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CAB38_06640 PF00121 Triosephosphate isomerase CAB38_06645 PF00106 short chain dehydrogenase CAB38_06660 PF03707 Bacterial signalling protein N terminal repeat CAB38_06660 PF00990 Diguanylate cyclase, GGDEF domain CAB38_06660 PF00563 EAL domain CAB38_06675 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CAB38_06675 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CAB38_06675 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CAB38_06675 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CAB38_06680 PF01039 Carboxyl transferase domain CAB38_06680 PF17848 Acetyl-coA carboxylase zinc finger domain CAB38_06685 PF00290 Tryptophan synthase alpha chain CAB38_06695 PF00291 Pyridoxal-phosphate dependent enzyme CAB38_06700 PF03466 LysR substrate binding domain CAB38_06700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB38_06705 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CAB38_06710 PF01416 tRNA pseudouridine synthase CAB38_06730 PF02774 Semialdehyde dehydrogenase, dimerisation domain CAB38_06730 PF01118 Semialdehyde dehydrogenase, NAD binding domain CAB38_06735 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CAB38_06735 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CAB38_06740 PF01264 Chorismate synthase CAB38_06745 PF05175 Methyltransferase small domain CAB38_06750 PF02630 SCO1/SenC CAB38_06755 PF02666 Phosphatidylserine decarboxylase CAB38_06770 PF05872 Bacterial protein of unknown function (DUF853) CAB38_06775 PF00293 NUDIX domain CAB38_06795 PF03449 Transcription elongation factor, N-terminal CAB38_06795 PF01272 Transcription elongation factor, GreA/GreB, C-term CAB38_06800 PF18693 TRAM domain CAB38_06800 PF04055 Radical SAM superfamily CAB38_06800 PF00919 Uncharacterized protein family UPF0004 CAB38_06810 PF00717 Peptidase S24-like CAB38_06815 PF11798 IMS family HHH motif CAB38_06815 PF11799 impB/mucB/samB family C-terminal domain CAB38_06815 PF13438 Domain of unknown function (DUF4113) CAB38_06815 PF00817 impB/mucB/samB family CAB38_06835 PF01555 DNA methylase CAB38_06890 PF00182 Chitinase class I CAB38_07065 PF01738 Dienelactone hydrolase family CAB38_07085 PF00692 dUTPase CAB38_07095 PF10609 NUBPL iron-transfer P-loop NTPase CAB38_07100 PF07715 TonB-dependent Receptor Plug Domain CAB38_07100 PF00593 TonB dependent receptor CAB38_07130 PF05188 MutS domain II CAB38_07130 PF05192 MutS domain III CAB38_07130 PF05190 MutS family domain IV CAB38_07130 PF00488 MutS domain V CAB38_07130 PF01624 MutS domain I CAB38_07140 PF00141 Peroxidase CAB38_07145 PF01479 S4 domain CAB38_07160 PF01554 MatE CAB38_07165 PF01245 Ribosomal protein L19 CAB38_07170 PF01746 tRNA (Guanine-1)-methyltransferase CAB38_07175 PF05239 PRC-barrel domain CAB38_07175 PF01782 RimM N-terminal domain CAB38_07180 PF00886 Ribosomal protein S16 CAB38_07185 PF01063 Amino-transferase class IV CAB38_07195 PF00448 SRP54-type protein, GTPase domain CAB38_07195 PF02881 SRP54-type protein, helical bundle domain CAB38_07195 PF02978 Signal peptide binding domain CAB38_07200 PF01578 Cytochrome C assembly protein CAB38_07205 PF01263 Aldose 1-epimerase CAB38_07210 PF06964 Alpha-L-arabinofuranosidase C-terminal domain CAB38_07220 PF00072 Response regulator receiver domain CAB38_07240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_07240 PF00512 His Kinase A (phospho-acceptor) domain CAB38_07240 PF01627 Hpt domain CAB38_07240 PF00072 Response regulator receiver domain CAB38_07240 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CAB38_07240 PF00672 HAMP domain CAB38_07245 PF01739 CheR methyltransferase, SAM binding domain CAB38_07245 PF03705 CheR methyltransferase, all-alpha domain CAB38_07250 PF01339 CheB methylesterase CAB38_07255 PF13493 Domain of unknown function (DUF4118) CAB38_07255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_07255 PF00512 His Kinase A (phospho-acceptor) domain CAB38_07255 PF02702 Osmosensitive K+ channel His kinase sensor domain CAB38_07255 PF13492 GAF domain CAB38_07260 PF07237 Protein of unknown function (DUF1428) CAB38_07265 PF00085 Thioredoxin CAB38_07270 PF07715 TonB-dependent Receptor Plug Domain CAB38_07270 PF00593 TonB dependent receptor CAB38_07275 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CAB38_07275 PF04616 Glycosyl hydrolases family 43 CAB38_07285 PF01627 Hpt domain CAB38_07285 PF00072 Response regulator receiver domain CAB38_07285 PF00512 His Kinase A (phospho-acceptor) domain CAB38_07285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_07285 PF17149 Periplasmic sensor domain found in signal transduction proteins CAB38_07285 PF00672 HAMP domain CAB38_07295 PF13581 Histidine kinase-like ATPase domain CAB38_07300 PF01740 STAS domain CAB38_07305 PF08678 Rsbr N terminal CAB38_07305 PF01740 STAS domain CAB38_07315 PF00183 Hsp90 protein CAB38_07315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_07320 PF12833 Helix-turn-helix domain CAB38_07330 PF05656 Protein of unknown function (DUF805) CAB38_07335 PF18073 Rubredoxin metal binding domain CAB38_07345 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CAB38_07350 PF00510 Cytochrome c oxidase subunit III CAB38_07355 PF00115 Cytochrome C and Quinol oxidase polypeptide I CAB38_07360 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CAB38_07360 PF06481 COX Aromatic Rich Motif CAB38_07370 PF02401 LytB protein CAB38_07375 PF01252 Signal peptidase (SPase) II CAB38_07380 PF08264 Anticodon-binding domain of tRNA CAB38_07380 PF00133 tRNA synthetases class I (I, L, M and V) CAB38_07380 PF06827 Zinc finger found in FPG and IleRS CAB38_07385 PF01687 Riboflavin kinase CAB38_07385 PF06574 FAD synthetase CAB38_07390 PF03023 Lipid II flippase MurJ CAB38_07395 PF01649 Ribosomal protein S20 CAB38_07400 PF01018 GTP1/OBG CAB38_07400 PF01926 50S ribosome-binding GTPase CAB38_07405 PF01016 Ribosomal L27 protein CAB38_07410 PF00829 Ribosomal prokaryotic L21 protein CAB38_07415 PF17755 UvrA DNA-binding domain CAB38_07415 PF17760 UvrA interaction domain CAB38_07415 PF00005 ABC transporter CAB38_07430 PF00378 Enoyl-CoA hydratase/isomerase CAB38_07470 PF04376 Arginine-tRNA-protein transferase, N terminus CAB38_07470 PF04377 Arginine-tRNA-protein transferase, C terminus CAB38_07480 PF02222 ATP-grasp domain CAB38_07510 PF00730 HhH-GPD superfamily base excision DNA repair protein CAB38_07525 PF00072 Response regulator receiver domain CAB38_07525 PF00196 Bacterial regulatory proteins, luxR family CAB38_07530 PF07730 Histidine kinase CAB38_07545 PF03775 Septum formation inhibitor MinC, C-terminal domain CAB38_07545 PF05209 Septum formation inhibitor MinC, N-terminal domain CAB38_07550 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CAB38_07555 PF03776 Septum formation topological specificity factor MinE CAB38_07565 PF00512 His Kinase A (phospho-acceptor) domain CAB38_07565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_07565 PF08521 Two-component sensor kinase N-terminal CAB38_07570 PF00072 Response regulator receiver domain CAB38_07570 PF00486 Transcriptional regulatory protein, C terminal CAB38_07585 PF08019 Phosphoethanolamine transferase EptA/EptB CAB38_07585 PF00884 Sulfatase CAB38_07600 PF07690 Major Facilitator Superfamily CAB38_07605 PF02347 Glycine cleavage system P-protein CAB38_07610 PF00135 Carboxylesterase family CAB38_07615 PF00248 Aldo/keto reductase family CAB38_07620 PF18011 C-terminal domain found in long catalases CAB38_07620 PF00199 Catalase CAB38_07620 PF06628 Catalase-related immune-responsive CAB38_07645 PF12833 Helix-turn-helix domain CAB38_07645 PF02311 AraC-like ligand binding domain CAB38_07685 PF03169 OPT oligopeptide transporter protein CAB38_07695 PF00326 Prolyl oligopeptidase family CAB38_07705 PF07733 Bacterial DNA polymerase III alpha NTPase domain CAB38_07705 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CAB38_07705 PF14579 Helix-hairpin-helix motif CAB38_07705 PF02811 PHP domain CAB38_07720 PF01726 LexA DNA binding domain CAB38_07720 PF00717 Peptidase S24-like CAB38_07755 PF00111 2Fe-2S iron-sulfur cluster binding domain CAB38_07755 PF01799 [2Fe-2S] binding domain CAB38_07760 PF00941 FAD binding domain in molybdopterin dehydrogenase CAB38_07760 PF03450 CO dehydrogenase flavoprotein C-terminal domain CAB38_07765 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CAB38_07765 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CAB38_07800 PF17755 UvrA DNA-binding domain CAB38_07820 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAB38_07830 PF00106 short chain dehydrogenase CAB38_07835 PF17678 Glycosyl hydrolase family 92 N-terminal domain CAB38_07835 PF07971 Glycosyl hydrolase family 92 CAB38_07850 PF00723 Glycosyl hydrolases family 15 CAB38_07865 PF13456 Reverse transcriptase-like CAB38_07865 PF00300 Histidine phosphatase superfamily (branch 1) CAB38_07900 PF04851 Type III restriction enzyme, res subunit CAB38_07900 PF08463 EcoEI R protein C-terminal CAB38_07900 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CAB38_07900 PF00271 Helicase conserved C-terminal domain CAB38_07910 PF02384 N-6 DNA Methylase CAB38_07920 PF05598 Transposase domain (DUF772) CAB38_07930 PF00664 ABC transporter transmembrane region CAB38_07930 PF03412 Peptidase C39 family CAB38_07930 PF00005 ABC transporter CAB38_07935 PF00155 Aminotransferase class I and II CAB38_07965 PF01522 Polysaccharide deacetylase CAB38_07970 PF00462 Glutaredoxin CAB38_07985 PF01979 Amidohydrolase family CAB38_07990 PF01979 Amidohydrolase family CAB38_08025 PF02645 Uncharacterised protein, DegV family COG1307 CAB38_08030 PF01327 Polypeptide deformylase CAB38_08165 PF00263 Bacterial type II and III secretion system protein CAB38_08165 PF03958 Bacterial type II/III secretion system short domain CAB38_08175 PF10741 Type II secretion system (T2SS), protein M subtype b CAB38_08180 PF05137 Fimbrial assembly protein (PilN) CAB38_08185 PF03934 Type II secretion system (T2SS), protein K CAB38_08195 PF07963 Prokaryotic N-terminal methylation motif CAB38_08200 PF12019 Type II transport protein GspH CAB38_08205 PF08334 Type II secretion system (T2SS), protein G CAB38_08210 PF00482 Type II secretion system (T2SS), protein F CAB38_08220 PF00437 Type II/IV secretion system protein CAB38_08220 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CAB38_08225 PF00082 Subtilase family CAB38_08225 PF04151 Bacterial pre-peptidase C-terminal domain CAB38_08230 PF05662 Coiled stalk of trimeric autotransporter adhesin CAB38_08230 PF05658 Head domain of trimeric autotransporter adhesin CAB38_08230 PF13018 Extended Signal Peptide of Type V secretion system CAB38_08230 PF03895 YadA-like membrane anchor domain CAB38_08235 PF00082 Subtilase family CAB38_08235 PF04151 Bacterial pre-peptidase C-terminal domain CAB38_08240 PF05658 Head domain of trimeric autotransporter adhesin CAB38_08240 PF05662 Coiled stalk of trimeric autotransporter adhesin CAB38_08240 PF03895 YadA-like membrane anchor domain CAB38_08240 PF13018 Extended Signal Peptide of Type V secretion system CAB38_08245 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CAB38_08245 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CAB38_08245 PF02769 AIR synthase related protein, C-terminal domain CAB38_08255 PF10411 Disulfide bond isomerase protein N-terminus CAB38_08255 PF13098 Thioredoxin-like domain CAB38_08265 PF02899 Phage integrase, N-terminal SAM-like domain CAB38_08265 PF00589 Phage integrase family CAB38_08280 PF03739 Lipopolysaccharide export system permease LptF/LptG CAB38_08290 PF00883 Cytosol aminopeptidase family, catalytic domain CAB38_08290 PF02789 Cytosol aminopeptidase family, N-terminal domain CAB38_08305 PF10458 Valyl tRNA synthetase tRNA binding arm CAB38_08305 PF00133 tRNA synthetases class I (I, L, M and V) CAB38_08305 PF08264 Anticodon-binding domain of tRNA CAB38_08320 PF00593 TonB dependent receptor CAB38_08320 PF07715 TonB-dependent Receptor Plug Domain CAB38_08325 PF01464 Transglycosylase SLT domain CAB38_08330 PF00544 Pectate lyase CAB38_08345 PF01066 CDP-alcohol phosphatidyltransferase CAB38_08355 PF03129 Anticodon binding domain CAB38_08355 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CAB38_08355 PF04073 Aminoacyl-tRNA editing domain CAB38_08360 PF00816 H-NS histone family CAB38_08370 PF02405 Permease MlaE CAB38_08375 PF00005 ABC transporter CAB38_08380 PF03886 ABC-type transport auxiliary lipoprotein component CAB38_08380 PF02470 MlaD protein CAB38_08400 PF05045 Rhamnan synthesis protein F CAB38_08400 PF14307 Glycosyltransferase WbsX CAB38_08405 PF01144 Coenzyme A transferase CAB38_08410 PF01144 Coenzyme A transferase CAB38_08415 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CAB38_08415 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CAB38_08415 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CAB38_08415 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CAB38_08420 PF01050 Mannose-6-phosphate isomerase CAB38_08420 PF00483 Nucleotidyl transferase CAB38_08425 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CAB38_08425 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CAB38_08425 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CAB38_08430 PF04321 RmlD substrate binding domain CAB38_08435 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CAB38_08440 PF00483 Nucleotidyl transferase CAB38_08445 PF16363 GDP-mannose 4,6 dehydratase CAB38_08450 PF01012 Electron transfer flavoprotein domain CAB38_08455 PF00766 Electron transfer flavoprotein FAD-binding domain CAB38_08455 PF01012 Electron transfer flavoprotein domain CAB38_08465 PF01040 UbiA prenyltransferase family CAB38_08470 PF01565 FAD binding domain CAB38_08470 PF04030 D-arabinono-1,4-lactone oxidase CAB38_08475 PF00106 short chain dehydrogenase CAB38_08485 PF01370 NAD dependent epimerase/dehydratase family CAB38_08520 PF00285 Citrate synthase, C-terminal domain CAB38_08525 PF01197 Ribosomal protein L31 CAB38_08530 PF01156 Inosine-uridine preferring nucleoside hydrolase CAB38_08535 PF00271 Helicase conserved C-terminal domain CAB38_08535 PF17191 RecG wedge domain CAB38_08535 PF00270 DEAD/DEAH box helicase CAB38_08540 PF01042 Endoribonuclease L-PSP CAB38_08545 PF04607 Region found in RelA / SpoT proteins CAB38_08545 PF02824 TGS domain CAB38_08545 PF13291 ACT domain CAB38_08550 PF13419 Haloacid dehalogenase-like hydrolase CAB38_08555 PF04198 Putative sugar-binding domain CAB38_08570 PF04966 Carbohydrate-selective porin, OprB family CAB38_08575 PF00528 Binding-protein-dependent transport system inner membrane component CAB38_08580 PF00528 Binding-protein-dependent transport system inner membrane component CAB38_08585 PF08402 TOBE domain CAB38_08585 PF00005 ABC transporter CAB38_08595 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CAB38_08595 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CAB38_08600 PF01192 RNA polymerase Rpb6 CAB38_08605 PF00625 Guanylate kinase CAB38_08610 PF03755 YicC-like family, N-terminal region CAB38_08610 PF08340 Domain of unknown function (DUF1732) CAB38_08615 PF01138 3' exoribonuclease family, domain 1 CAB38_08615 PF03725 3' exoribonuclease family, domain 2 CAB38_08625 PF01725 Ham1 family CAB38_08630 PF04055 Radical SAM superfamily CAB38_08630 PF06969 HemN C-terminal domain CAB38_08645 PF00557 Metallopeptidase family M24 CAB38_08655 PF05195 Aminopeptidase P, N-terminal domain CAB38_08655 PF00557 Metallopeptidase family M24 CAB38_08660 PF03695 Uncharacterised protein family (UPF0149) CAB38_08670 PF05164 Cell division protein ZapA CAB38_08680 PF01812 5-formyltetrahydrofolate cyclo-ligase family CAB38_08690 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CAB38_08700 PF13369 Transglutaminase-like superfamily CAB38_08705 PF00301 Rubredoxin CAB38_08710 PF02581 Thiamine monophosphate synthase CAB38_08725 PF00202 Aminotransferase class-III CAB38_08730 PF17874 MalT-like TPR region CAB38_08730 PF00196 Bacterial regulatory proteins, luxR family CAB38_08735 PF00127 Copper binding proteins, plastocyanin/azurin family CAB38_08740 PF00155 Aminotransferase class I and II CAB38_08750 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CAB38_08750 PF00034 Cytochrome c CAB38_08755 PF01593 Flavin containing amine oxidoreductase CAB38_08770 PF00202 Aminotransferase class-III CAB38_08775 PF00520 Ion transport protein CAB38_08775 PF00027 Cyclic nucleotide-binding domain CAB38_08795 PF01569 PAP2 superfamily CAB38_08800 PF01062 Bestrophin, RFP-TM, chloride channel CAB38_08810 PF02875 Mur ligase family, glutamate ligase domain CAB38_08810 PF08245 Mur ligase middle domain CAB38_08810 PF01225 Mur ligase family, catalytic domain CAB38_08840 PF03030 Inorganic H+ pyrophosphatase CAB38_08850 PF00719 Inorganic pyrophosphatase CAB38_08875 PF12833 Helix-turn-helix domain CAB38_08880 PF18500 CadC C-terminal domain 1 CAB38_08880 PF00486 Transcriptional regulatory protein, C terminal CAB38_08885 PF01964 Radical SAM ThiC family CAB38_08885 PF13667 ThiC-associated domain CAB38_08895 PF00593 TonB dependent receptor CAB38_08895 PF07715 TonB-dependent Receptor Plug Domain CAB38_08900 PF00672 HAMP domain CAB38_08900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAB38_08900 PF02203 Tar ligand binding domain homologue CAB38_08910 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CAB38_08910 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CAB38_08915 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CAB38_08915 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CAB38_08915 PF00205 Thiamine pyrophosphate enzyme, central domain CAB38_08925 PF00291 Pyridoxal-phosphate dependent enzyme CAB38_08930 PF00682 HMGL-like CAB38_08930 PF08502 LeuA allosteric (dimerisation) domain CAB38_08935 PF00180 Isocitrate/isopropylmalate dehydrogenase CAB38_08940 PF00694 Aconitase C-terminal domain CAB38_08945 PF00330 Aconitase family (aconitate hydratase) CAB38_08950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB38_08955 PF00990 Diguanylate cyclase, GGDEF domain CAB38_08955 PF17151 Periplasmic sensor domain CAB38_08970 PF02321 Outer membrane efflux protein CAB38_08975 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CAB38_08980 PF03279 Bacterial lipid A biosynthesis acyltransferase CAB38_09005 PF03949 Malic enzyme, NAD binding domain CAB38_09005 PF00390 Malic enzyme, N-terminal domain CAB38_09005 PF01515 Phosphate acetyl/butaryl transferase CAB38_09010 PF00375 Sodium:dicarboxylate symporter family CAB38_09030 PF07690 Major Facilitator Superfamily CAB38_09040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB38_09040 PF03466 LysR substrate binding domain CAB38_09045 PF00248 Aldo/keto reductase family CAB38_09065 PF00196 Bacterial regulatory proteins, luxR family CAB38_09065 PF00072 Response regulator receiver domain CAB38_09080 PF00512 His Kinase A (phospho-acceptor) domain CAB38_09080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_09080 PF08521 Two-component sensor kinase N-terminal CAB38_09085 PF00072 Response regulator receiver domain CAB38_09085 PF00486 Transcriptional regulatory protein, C terminal CAB38_09100 PF03600 Citrate transporter CAB38_09105 PF00106 short chain dehydrogenase CAB38_09110 PF00356 Bacterial regulatory proteins, lacI family CAB38_09125 PF00128 Alpha amylase, catalytic domain CAB38_09140 PF03193 RsgA GTPase CAB38_09160 PF00005 ABC transporter CAB38_09160 PF00664 ABC transporter transmembrane region CAB38_09185 PF08240 Alcohol dehydrogenase GroES-like domain CAB38_09185 PF13823 Alcohol dehydrogenase GroES-associated CAB38_09185 PF00107 Zinc-binding dehydrogenase CAB38_09230 PF07715 TonB-dependent Receptor Plug Domain CAB38_09230 PF00593 TonB dependent receptor CAB38_09245 PF00005 ABC transporter CAB38_09255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB38_09255 PF03466 LysR substrate binding domain CAB38_09260 PF01042 Endoribonuclease L-PSP CAB38_09275 PF00672 HAMP domain CAB38_09275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAB38_09275 PF02203 Tar ligand binding domain homologue CAB38_09290 PF03466 LysR substrate binding domain CAB38_09290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB38_09360 PF00140 Sigma-70 factor, region 1.2 CAB38_09360 PF04546 Sigma-70, non-essential region CAB38_09360 PF04542 Sigma-70 region 2 CAB38_09360 PF04539 Sigma-70 region 3 CAB38_09360 PF04545 Sigma-70, region 4 CAB38_09360 PF03979 Sigma-70 factor, region 1.1 CAB38_09365 PF02580 D-Tyr-tRNA(Tyr) deacylase CAB38_09370 PF03279 Bacterial lipid A biosynthesis acyltransferase CAB38_09390 PF00925 GTP cyclohydrolase II CAB38_09410 PF00535 Glycosyl transferase family 2 CAB38_09425 PF01029 NusB family CAB38_09425 PF01189 16S rRNA methyltransferase RsmB/F CAB38_09430 PF00551 Formyl transferase CAB38_09430 PF02911 Formyl transferase, C-terminal domain CAB38_09435 PF01327 Polypeptide deformylase CAB38_09440 PF01476 LysM domain CAB38_09445 PF17782 DprA winged helix domain CAB38_09445 PF02481 DNA recombination-mediator protein A CAB38_09450 PF04361 Protein of unknown function (DUF494) CAB38_09455 PF00114 Pilin (bacterial filament) CAB38_09455 PF07963 Prokaryotic N-terminal methylation motif CAB38_09465 PF01131 DNA topoisomerase CAB38_09465 PF01751 Toprim domain CAB38_09465 PF13368 Topoisomerase C-terminal repeat CAB38_09470 PF01300 Telomere recombination CAB38_09500 PF01343 Peptidase family S49 CAB38_09505 PF01554 MatE CAB38_09525 PF17764 3′ DNA-binding domain (3′BD) CAB38_09525 PF00271 Helicase conserved C-terminal domain CAB38_09525 PF00270 DEAD/DEAH box helicase CAB38_09525 PF18074 Primosomal protein N C-terminal domain CAB38_09525 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CAB38_09530 PF00043 Glutathione S-transferase, C-terminal domain CAB38_09530 PF13417 Glutathione S-transferase, N-terminal domain CAB38_09545 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAB38_09550 PF03458 UPF0126 domain CAB38_09555 PF04542 Sigma-70 region 2 CAB38_09555 PF04545 Sigma-70, region 4 CAB38_09560 PF03167 Uracil DNA glycosylase superfamily CAB38_09565 PF00072 Response regulator receiver domain CAB38_09570 PF18075 FtsX extracellular domain CAB38_09575 PF00005 ABC transporter CAB38_09580 PF00270 DEAD/DEAH box helicase CAB38_09580 PF00271 Helicase conserved C-terminal domain CAB38_09580 PF12300 ATP-dependent RNA helicase RhlB CAB38_09585 PF00085 Thioredoxin CAB38_09590 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CAB38_09590 PF07498 Rho termination factor, N-terminal domain CAB38_09590 PF07497 Rho termination factor, RNA-binding domain CAB38_09595 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) CAB38_09600 PF03466 LysR substrate binding domain CAB38_09600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB38_09610 PF03971 Monomeric isocitrate dehydrogenase CAB38_09625 PF09704 CRISPR-associated protein (Cas_Cas5) CAB38_09645 PF01867 CRISPR associated protein Cas1 CAB38_09650 PF09827 CRISPR associated protein Cas2 CAB38_09660 PF01476 LysM domain CAB38_09660 PF04972 BON domain CAB38_09665 PF14489 QueF-like protein CAB38_09665 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CAB38_09670 PF01546 Peptidase family M20/M25/M40 CAB38_09670 PF07687 Peptidase dimerisation domain CAB38_09675 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CAB38_09680 PF00873 AcrB/AcrD/AcrF family CAB38_09685 PF00873 AcrB/AcrD/AcrF family CAB38_09690 PF07063 Domain of unknown function (DUF1338) CAB38_09740 PF01427 D-ala-D-ala dipeptidase CAB38_09745 PF01510 N-acetylmuramoyl-L-alanine amidase CAB38_09755 PF13378 Enolase C-terminal domain-like CAB38_09755 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CAB38_09765 PF13520 Amino acid permease CAB38_09780 PF05360 yiaA/B two helix domain CAB38_09785 PF07995 Glucose / Sorbosone dehydrogenase CAB38_09790 PF14310 Fibronectin type III-like domain CAB38_09790 PF00933 Glycosyl hydrolase family 3 N terminal domain CAB38_09790 PF01915 Glycosyl hydrolase family 3 C-terminal domain CAB38_09795 PF02152 Dihydroneopterin aldolase CAB38_09800 PF00814 Glycoprotease family CAB38_09805 PF01165 Ribosomal protein S21 CAB38_09810 PF09424 Yqey-like protein CAB38_09820 PF03631 Virulence factor BrkB CAB38_09825 PF01807 CHC2 zinc finger CAB38_09825 PF08275 DNA primase catalytic core, N-terminal domain CAB38_09825 PF08278 DNA primase DnaG DnaB-binding CAB38_09825 PF10410 DnaB-helicase binding domain of primase CAB38_09830 PF13593 SBF-like CPA transporter family (DUF4137) CAB38_09840 PF01040 UbiA prenyltransferase family CAB38_09865 PF00510 Cytochrome c oxidase subunit III CAB38_09870 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 CAB38_09880 PF00115 Cytochrome C and Quinol oxidase polypeptide I CAB38_09885 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CAB38_09885 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CAB38_09895 PF01619 Proline dehydrogenase CAB38_09895 PF14850 DNA-binding domain of Proline dehydrogenase CAB38_09895 PF00171 Aldehyde dehydrogenase family CAB38_09895 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CAB38_09925 PF00579 tRNA synthetases class I (W and Y) CAB38_09930 PF04225 Opacity-associated protein A LysM-like domain CAB38_09930 PF01551 Peptidase family M23 CAB38_09935 PF03702 Anhydro-N-acetylmuramic acid kinase CAB38_09945 PF07690 Major Facilitator Superfamily CAB38_09950 PF03372 Endonuclease/Exonuclease/phosphatase family CAB38_09955 PF00156 Phosphoribosyl transferase domain CAB38_09965 PF13614 AAA domain CAB38_09970 PF17762 HTH domain found in ParB protein CAB38_09970 PF02195 ParB-like nuclease domain CAB38_09985 PF01370 NAD dependent epimerase/dehydratase family CAB38_09990 PF00535 Glycosyl transferase family 2 CAB38_10005 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CAB38_10005 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CAB38_10005 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CAB38_10005 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CAB38_10010 PF00692 dUTPase CAB38_10015 PF04127 DNA / pantothenate metabolism flavoprotein CAB38_10015 PF02441 Flavoprotein CAB38_10020 PF04002 RadC-like JAB domain CAB38_10025 PF00750 tRNA synthetases class I (R) CAB38_10025 PF05746 DALR anticodon binding domain CAB38_10025 PF03485 Arginyl tRNA synthetase N terminal domain CAB38_10040 PF00106 short chain dehydrogenase CAB38_10045 PF01757 Acyltransferase family CAB38_10050 PF03033 Glycosyltransferase family 28 N-terminal domain CAB38_10055 PF00975 Thioesterase domain CAB38_10055 PF00501 AMP-binding enzyme CAB38_10055 PF00550 Phosphopantetheine attachment site CAB38_10055 PF13193 AMP-binding enzyme C-terminal domain CAB38_10055 PF00668 Condensation domain CAB38_10060 PF17810 Arginine decarboxylase helical bundle domain CAB38_10060 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CAB38_10060 PF17944 Arginine decarboxylase C-terminal helical extension CAB38_10065 PF17284 Spermidine synthase tetramerisation domain CAB38_10105 PF00543 Nitrogen regulatory protein P-II CAB38_10110 PF04380 Membrane fusogenic activity CAB38_10115 PF13335 Magnesium chelatase, subunit ChlI C-terminal CAB38_10115 PF01078 Magnesium chelatase, subunit ChlI CAB38_10130 PF00563 EAL domain CAB38_10130 PF12792 CSS motif domain associated with EAL CAB38_10135 PF00487 Fatty acid desaturase CAB38_10140 PF00111 2Fe-2S iron-sulfur cluster binding domain CAB38_10140 PF00175 Oxidoreductase NAD-binding domain CAB38_10140 PF00970 Oxidoreductase FAD-binding domain CAB38_10145 PF00440 Bacterial regulatory proteins, tetR family CAB38_10165 PF01139 tRNA-splicing ligase RtcB CAB38_10205 PF00486 Transcriptional regulatory protein, C terminal CAB38_10205 PF00072 Response regulator receiver domain CAB38_10210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_10210 PF00512 His Kinase A (phospho-acceptor) domain CAB38_10210 PF08521 Two-component sensor kinase N-terminal CAB38_10240 PF00595 PDZ domain CAB38_10265 PF01594 AI-2E family transporter CAB38_10270 PF13419 Haloacid dehalogenase-like hydrolase CAB38_10275 PF02789 Cytosol aminopeptidase family, N-terminal domain CAB38_10275 PF00883 Cytosol aminopeptidase family, catalytic domain CAB38_10290 PF00199 Catalase CAB38_10315 PF00196 Bacterial regulatory proteins, luxR family CAB38_10315 PF00072 Response regulator receiver domain CAB38_10320 PF07730 Histidine kinase CAB38_10325 PF13533 Biotin-lipoyl like CAB38_10330 PF00005 ABC transporter CAB38_10350 PF00892 EamA-like transporter family CAB38_10355 PF00892 EamA-like transporter family CAB38_10375 PF00753 Metallo-beta-lactamase superfamily CAB38_10380 PF00579 tRNA synthetases class I (W and Y) CAB38_10385 PF05532 CsbD-like CAB38_10400 PF00491 Arginase family CAB38_10430 PF02223 Thymidylate kinase CAB38_10480 PF03309 Type III pantothenate kinase CAB38_10485 PF03099 Biotin/lipoate A/B protein ligase family CAB38_10485 PF02237 Biotin protein ligase C terminal domain CAB38_10485 PF08279 HTH domain CAB38_10500 PF06167 Glucose-regulated metallo-peptidase M90 CAB38_10515 PF00512 His Kinase A (phospho-acceptor) domain CAB38_10515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_10515 PF00672 HAMP domain CAB38_10520 PF00072 Response regulator receiver domain CAB38_10520 PF00486 Transcriptional regulatory protein, C terminal CAB38_10530 PF01207 Dihydrouridine synthase (Dus) CAB38_10550 PF00199 Catalase CAB38_10550 PF06628 Catalase-related immune-responsive CAB38_10560 PF13307 Helicase C-terminal domain CAB38_10560 PF06733 DEAD_2 CAB38_10575 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CAB38_10575 PF01488 Shikimate / quinate 5-dehydrogenase CAB38_10575 PF08501 Shikimate dehydrogenase substrate binding domain CAB38_10585 PF00667 FAD binding domain CAB38_10585 PF00258 Flavodoxin CAB38_10585 PF00175 Oxidoreductase NAD-binding domain CAB38_10595 PF03466 LysR substrate binding domain CAB38_10595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB38_10610 PF00490 Delta-aminolevulinic acid dehydratase CAB38_10635 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CAB38_10635 PF00326 Prolyl oligopeptidase family CAB38_10640 PF00043 Glutathione S-transferase, C-terminal domain CAB38_10640 PF02798 Glutathione S-transferase, N-terminal domain CAB38_10665 PF04820 Tryptophan halogenase CAB38_10680 PF00005 ABC transporter CAB38_10690 PF01381 Helix-turn-helix CAB38_10700 PF01229 Glycosyl hydrolases family 39 CAB38_10705 PF02583 Metal-sensitive transcriptional repressor CAB38_10710 PF16916 Dimerisation domain of Zinc Transporter CAB38_10710 PF01545 Cation efflux family CAB38_10720 PF07715 TonB-dependent Receptor Plug Domain CAB38_10720 PF00593 TonB dependent receptor CAB38_10730 PF12833 Helix-turn-helix domain CAB38_10730 PF01965 DJ-1/PfpI family CAB38_10735 PF00175 Oxidoreductase NAD-binding domain CAB38_10735 PF00970 Oxidoreductase FAD-binding domain CAB38_10735 PF00111 2Fe-2S iron-sulfur cluster binding domain CAB38_10740 PF00005 ABC transporter CAB38_10745 PF01061 ABC-2 type transporter CAB38_10755 PF08546 Ketopantoate reductase PanE/ApbA C terminal CAB38_10755 PF02558 Ketopantoate reductase PanE/ApbA CAB38_10790 PF00268 Ribonucleotide reductase, small chain CAB38_10800 PF02867 Ribonucleotide reductase, barrel domain CAB38_10800 PF00317 Ribonucleotide reductase, all-alpha domain CAB38_10800 PF03477 ATP cone domain CAB38_10815 PF00583 Acetyltransferase (GNAT) family CAB38_10815 PF13380 CoA binding domain CAB38_10815 PF13607 Succinyl-CoA ligase like flavodoxin domain CAB38_10820 PF00571 CBS domain CAB38_10820 PF03448 MgtE intracellular N domain CAB38_10820 PF01769 Divalent cation transporter CAB38_10825 PF00194 Eukaryotic-type carbonic anhydrase CAB38_10830 PF02254 TrkA-N domain CAB38_10830 PF00999 Sodium/hydrogen exchanger family CAB38_10840 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CAB38_10840 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CAB38_10845 PF00723 Glycosyl hydrolases family 15 CAB38_10860 PF05166 YcgL domain CAB38_10865 PF02801 Beta-ketoacyl synthase, C-terminal domain CAB38_10865 PF00109 Beta-ketoacyl synthase, N-terminal domain CAB38_10875 PF00535 Glycosyl transferase family 2 CAB38_10925 PF07977 FabA-like domain CAB38_10930 PF01553 Acyltransferase CAB38_10940 PF00550 Phosphopantetheine attachment site CAB38_10945 PF04820 Tryptophan halogenase CAB38_10970 PF07676 WD40-like Beta Propeller Repeat CAB38_10970 PF00326 Prolyl oligopeptidase family CAB38_10990 PF01218 Coproporphyrinogen III oxidase CAB38_11000 PF00476 DNA polymerase family A CAB38_11000 PF01612 3'-5' exonuclease CAB38_11000 PF01367 5'-3' exonuclease, C-terminal SAM fold CAB38_11000 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CAB38_11030 PF00069 Protein kinase domain CAB38_11070 PF04717 Type VI secretion system, phage-baseplate injector CAB38_11085 PF00069 Protein kinase domain CAB38_11085 PF03793 PASTA domain CAB38_11095 PF08281 Sigma-70, region 4 CAB38_11095 PF04542 Sigma-70 region 2 CAB38_11115 PF00328 Histidine phosphatase superfamily (branch 2) CAB38_11160 PF00004 ATPase family associated with various cellular activities (AAA) CAB38_11160 PF07724 AAA domain (Cdc48 subfamily) CAB38_11160 PF17871 AAA lid domain CAB38_11160 PF10431 C-terminal, D2-small domain, of ClpB protein CAB38_11185 PF05638 Type VI secretion system effector, Hcp CAB38_11220 PF14602 Hexapeptide repeat of succinyl-transferase CAB38_11220 PF12464 Maltose acetyltransferase CAB38_11230 PF13361 UvrD-like helicase C-terminal domain CAB38_11230 PF00580 UvrD/REP helicase N-terminal domain CAB38_11245 PF13091 PLD-like domain CAB38_11245 PF13396 Phospholipase_D-nuclease N-terminal CAB38_11255 PF03737 Aldolase/RraA CAB38_11260 PF04303 PrpF protein CAB38_11270 PF04909 Amidohydrolase CAB38_11275 PF00471 Ribosomal protein L33 CAB38_11280 PF00830 Ribosomal L28 family CAB38_11285 PF00873 AcrB/AcrD/AcrF family CAB38_11300 PF13533 Biotin-lipoyl like CAB38_11320 PF02527 rRNA small subunit methyltransferase G CAB38_11325 PF16655 PhoD-like phosphatase, N-terminal domain CAB38_11325 PF09423 PhoD-like phosphatase CAB38_11330 PF16655 PhoD-like phosphatase, N-terminal domain CAB38_11330 PF09423 PhoD-like phosphatase CAB38_11335 PF01648 4'-phosphopantetheinyl transferase superfamily CAB38_11340 PF04226 Transglycosylase associated protein CAB38_11350 PF03372 Endonuclease/Exonuclease/phosphatase family CAB38_11355 PF00480 ROK family CAB38_11365 PF00639 PPIC-type PPIASE domain CAB38_11365 PF09312 SurA N-terminal domain CAB38_11375 PF00474 Sodium:solute symporter family CAB38_11380 PF04341 Protein of unknown function, DUF485 CAB38_11390 PF00501 AMP-binding enzyme CAB38_11390 PF13193 AMP-binding enzyme C-terminal domain CAB38_11390 PF16177 Acetyl-coenzyme A synthetase N-terminus CAB38_11420 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CAB38_11420 PF04616 Glycosyl hydrolases family 43 CAB38_11430 PF00248 Aldo/keto reductase family CAB38_11445 PF01557 Fumarylacetoacetate (FAA) hydrolase family CAB38_11455 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CAB38_11455 PF13378 Enolase C-terminal domain-like CAB38_11460 PF05336 L-rhamnose mutarotase CAB38_11465 PF07690 Major Facilitator Superfamily CAB38_11470 PF01614 Bacterial transcriptional regulator CAB38_11470 PF09339 IclR helix-turn-helix domain CAB38_11480 PF02659 Putative manganese efflux pump CAB38_11485 PF00512 His Kinase A (phospho-acceptor) domain CAB38_11485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_11500 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain CAB38_11500 PF06165 Glycosyltransferase family 36 CAB38_11520 PF01011 PQQ enzyme repeat CAB38_11520 PF13570 PQQ-like domain CAB38_11520 PF13360 PQQ-like domain CAB38_11540 PF04357 TamB, inner membrane protein subunit of TAM complex CAB38_11545 PF01103 Surface antigen CAB38_11545 PF17243 POTRA domain TamA domain 1 CAB38_11590 PF02092 Glycyl-tRNA synthetase beta subunit CAB38_11590 PF05746 DALR anticodon binding domain CAB38_11595 PF02091 Glycyl-tRNA synthetase alpha subunit CAB38_11615 PF00117 Glutamine amidotransferase class-I CAB38_11615 PF00958 GMP synthase C terminal domain CAB38_11625 PF00902 Sec-independent protein translocase protein (TatC) CAB38_11630 PF02416 mttA/Hcf106 family CAB38_11635 PF02416 mttA/Hcf106 family CAB38_11645 PF00762 Ferrochelatase CAB38_11650 PF12697 Alpha/beta hydrolase family CAB38_11670 PF04381 Putative exonuclease, RdgC CAB38_11675 PF01171 PP-loop family CAB38_11690 PF00356 Bacterial regulatory proteins, lacI family CAB38_11705 PF13378 Enolase C-terminal domain-like CAB38_11705 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CAB38_11710 PF04616 Glycosyl hydrolases family 43 CAB38_11710 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CAB38_11715 PF07691 PA14 domain CAB38_11715 PF01915 Glycosyl hydrolase family 3 C-terminal domain CAB38_11715 PF00933 Glycosyl hydrolase family 3 N terminal domain CAB38_11715 PF14310 Fibronectin type III-like domain CAB38_11775 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) CAB38_11810 PF09722 Protein of unknown function (DUF2384) CAB38_11810 PF01936 NYN domain CAB38_11840 PF00239 Resolvase, N terminal domain CAB38_11840 PF02796 Helix-turn-helix domain of resolvase CAB38_11890 PF02810 SEC-C motif CAB38_11890 PF03695 Uncharacterised protein family (UPF0149) CAB38_11910 PF02796 Helix-turn-helix domain of resolvase CAB38_11910 PF00239 Resolvase, N terminal domain CAB38_11920 PF04337 Protein of unknown function, DUF480 CAB38_11930 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) CAB38_11935 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CAB38_11940 PF04820 Tryptophan halogenase CAB38_11955 PF00356 Bacterial regulatory proteins, lacI family CAB38_11970 PF01553 Acyltransferase CAB38_11975 PF14765 Polyketide synthase dehydratase CAB38_11975 PF00550 Phosphopantetheine attachment site CAB38_11975 PF08659 KR domain CAB38_11975 PF02801 Beta-ketoacyl synthase, C-terminal domain CAB38_11975 PF00109 Beta-ketoacyl synthase, N-terminal domain CAB38_11975 PF16197 Ketoacyl-synthetase C-terminal extension CAB38_11975 PF08240 Alcohol dehydrogenase GroES-like domain CAB38_11975 PF00698 Acyl transferase domain CAB38_11975 PF00107 Zinc-binding dehydrogenase CAB38_12005 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase CAB38_12005 PF07055 Enoyl reductase FAD binding domain CAB38_12005 PF12241 Trans-2-enoyl-CoA reductase catalytic region CAB38_12015 PF00294 pfkB family carbohydrate kinase CAB38_12090 PF00128 Alpha amylase, catalytic domain CAB38_12090 PF11896 Domain of unknown function (DUF3416) CAB38_12095 PF00128 Alpha amylase, catalytic domain CAB38_12095 PF16657 Maltogenic Amylase, C-terminal domain CAB38_12100 PF00128 Alpha amylase, catalytic domain CAB38_12100 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CAB38_12100 PF02806 Alpha amylase, C-terminal all-beta domain CAB38_12110 PF00248 Aldo/keto reductase family CAB38_12115 PF00135 Carboxylesterase family CAB38_12120 PF07859 alpha/beta hydrolase fold CAB38_12120 PF13472 GDSL-like Lipase/Acylhydrolase family CAB38_12130 PF03480 Bacterial extracellular solute-binding protein, family 7 CAB38_12140 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CAB38_12145 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CAB38_12145 PF04616 Glycosyl hydrolases family 43 CAB38_12150 PF00356 Bacterial regulatory proteins, lacI family CAB38_12160 PF04962 KduI/IolB family CAB38_12175 PF00657 GDSL-like Lipase/Acylhydrolase CAB38_12190 PF00351 Biopterin-dependent aromatic amino acid hydroxylase CAB38_12195 PF01037 Lrp/AsnC ligand binding domain CAB38_12200 PF00593 TonB dependent receptor CAB38_12200 PF07715 TonB-dependent Receptor Plug Domain CAB38_12200 PF07660 Secretin and TonB N terminus short domain CAB38_12205 PF01734 Patatin-like phospholipase CAB38_12215 PF00005 ABC transporter CAB38_12230 PF00005 ABC transporter CAB38_12235 PF00528 Binding-protein-dependent transport system inner membrane component CAB38_12245 PF12867 DinB superfamily CAB38_12245 PF03781 Sulfatase-modifying factor enzyme 1 CAB38_12280 PF02796 Helix-turn-helix domain of resolvase CAB38_12280 PF00239 Resolvase, N terminal domain CAB38_12305 PF13302 Acetyltransferase (GNAT) domain CAB38_12310 PF00580 UvrD/REP helicase N-terminal domain CAB38_12310 PF13361 UvrD-like helicase C-terminal domain CAB38_12330 PF06827 Zinc finger found in FPG and IleRS CAB38_12330 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CAB38_12330 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CAB38_12360 PF03594 Benzoate membrane transport protein CAB38_12370 PF01126 Heme oxygenase CAB38_12375 PF07690 Major Facilitator Superfamily CAB38_12380 PF01263 Aldose 1-epimerase CAB38_12390 PF02810 SEC-C motif CAB38_12395 PF01925 Sulfite exporter TauE/SafE CAB38_12415 PF01227 GTP cyclohydrolase I CAB38_12425 PF07869 Protein of unknown function (DUF1656) CAB38_12430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CAB38_12430 PF00529 HlyD membrane-fusion protein of T1SS CAB38_12435 PF02321 Outer membrane efflux protein CAB38_12440 PF04632 Fusaric acid resistance protein family CAB38_12445 PF00083 Sugar (and other) transporter CAB38_12450 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family CAB38_12455 PF13091 PLD-like domain CAB38_12455 PF13396 Phospholipase_D-nuclease N-terminal CAB38_12480 PF01850 PIN domain CAB38_12550 PF00849 RNA pseudouridylate synthase CAB38_12595 PF02350 UDP-N-acetylglucosamine 2-epimerase CAB38_12600 PF02397 Bacterial sugar transferase CAB38_12620 PF03466 LysR substrate binding domain CAB38_12620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB38_12650 PF01645 Conserved region in glutamate synthase CAB38_12650 PF00310 Glutamine amidotransferases class-II CAB38_12650 PF01493 GXGXG motif CAB38_12650 PF04898 Glutamate synthase central domain CAB38_12655 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAB38_12655 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CAB38_12660 PF00107 Zinc-binding dehydrogenase CAB38_12660 PF08240 Alcohol dehydrogenase GroES-like domain CAB38_12670 PF00150 Cellulase (glycosyl hydrolase family 5) CAB38_12680 PF00150 Cellulase (glycosyl hydrolase family 5) CAB38_12690 PF00150 Cellulase (glycosyl hydrolase family 5) CAB38_12700 PF04389 Peptidase family M28 CAB38_12710 PF01551 Peptidase family M23 CAB38_12715 PF13180 PDZ domain CAB38_12715 PF03572 Peptidase family S41 CAB38_12720 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CAB38_12720 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CAB38_12735 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CAB38_12770 PF13396 Phospholipase_D-nuclease N-terminal CAB38_12770 PF13091 PLD-like domain CAB38_12780 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CAB38_12785 PF02472 Biopolymer transport protein ExbD/TolR CAB38_12790 PF02472 Biopolymer transport protein ExbD/TolR CAB38_12795 PF01618 MotA/TolQ/ExbB proton channel family CAB38_12800 PF03544 Gram-negative bacterial TonB protein C-terminal CAB38_12810 PF01435 Peptidase family M48 CAB38_12820 PF18053 DNA gyrase B subunit insert domain CAB38_12820 PF00986 DNA gyrase B subunit, carboxyl terminus CAB38_12820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_12820 PF01751 Toprim domain CAB38_12820 PF00204 DNA gyrase B CAB38_12825 PF02463 RecF/RecN/SMC N terminal domain CAB38_12830 PF02768 DNA polymerase III beta subunit, C-terminal domain CAB38_12830 PF00712 DNA polymerase III beta subunit, N-terminal domain CAB38_12830 PF02767 DNA polymerase III beta subunit, central domain CAB38_12835 PF08299 Bacterial dnaA protein helix-turn-helix CAB38_12835 PF11638 DnaA N-terminal domain CAB38_12835 PF00308 Bacterial dnaA protein CAB38_12840 PF00468 Ribosomal protein L34 CAB38_12845 PF00825 Ribonuclease P CAB38_12850 PF14849 YidC periplasmic domain CAB38_12850 PF02096 60Kd inner membrane protein CAB38_12855 PF01522 Polysaccharide deacetylase CAB38_12860 PF12631 MnmE helical domain CAB38_12860 PF01926 50S ribosome-binding GTPase CAB38_12860 PF10396 GTP-binding protein TrmE N-terminus CAB38_12865 PF01569 PAP2 superfamily CAB38_12875 PF03009 Glycerophosphoryl diester phosphodiesterase family CAB38_12880 PF01694 Rhomboid family CAB38_12890 PF03741 Integral membrane protein TerC family CAB38_12900 PF10672 S-adenosylmethionine-dependent methyltransferase CAB38_12900 PF17785 PUA-like domain CAB38_12925 PF05598 Transposase domain (DUF772) CAB38_12930 PF10947 Protein of unknown function (DUF2628) CAB38_12945 PF13520 Amino acid permease CAB38_12955 PF00043 Glutathione S-transferase, C-terminal domain CAB38_12955 PF13417 Glutathione S-transferase, N-terminal domain CAB38_12970 PF03466 LysR substrate binding domain CAB38_12970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB38_12975 PF00107 Zinc-binding dehydrogenase CAB38_12975 PF08240 Alcohol dehydrogenase GroES-like domain CAB38_12980 PF02646 RmuC family CAB38_12990 PF00255 Glutathione peroxidase CAB38_13000 PF04333 MlaA lipoprotein CAB38_13010 PF05494 MlaC protein CAB38_13015 PF02470 MlaD protein CAB38_13020 PF02405 Permease MlaE CAB38_13025 PF00005 ABC transporter CAB38_13040 PF17946 RecC C-terminal domain CAB38_13045 PF13361 UvrD-like helicase C-terminal domain CAB38_13045 PF00580 UvrD/REP helicase N-terminal domain CAB38_13045 PF12705 PD-(D/E)XK nuclease superfamily CAB38_13050 PF13538 UvrD-like helicase C-terminal domain CAB38_13065 PF01609 Transposase DDE domain CAB38_13065 PF05598 Transposase domain (DUF772) CAB38_13100 PF01425 Amidase CAB38_13105 PF00289 Biotin carboxylase, N-terminal domain CAB38_13105 PF00364 Biotin-requiring enzyme CAB38_13105 PF02785 Biotin carboxylase C-terminal domain CAB38_13105 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CAB38_13120 PF13439 Glycosyltransferase Family 4 CAB38_13120 PF00534 Glycosyl transferases group 1 CAB38_13155 PF16363 GDP-mannose 4,6 dehydratase CAB38_13170 PF00664 ABC transporter transmembrane region CAB38_13170 PF00005 ABC transporter CAB38_13185 PF00733 Asparagine synthase CAB38_13185 PF13537 Glutamine amidotransferase domain CAB38_13200 PF07475 HPr Serine kinase C-terminal domain CAB38_13200 PF02603 HPr Serine kinase N terminus CAB38_13205 PF00685 Sulfotransferase domain CAB38_13300 PF00270 DEAD/DEAH box helicase CAB38_13300 PF09369 Domain of unknown function (DUF1998) CAB38_13300 PF00271 Helicase conserved C-terminal domain CAB38_13305 PF03006 Haemolysin-III related CAB38_13325 PF00106 short chain dehydrogenase CAB38_13345 PF02525 Flavodoxin-like fold CAB38_13370 PF05532 CsbD-like CAB38_13390 PF16485 Protealysin propeptide CAB38_13390 PF02868 Thermolysin metallopeptidase, alpha-helical domain CAB38_13390 PF01447 Thermolysin metallopeptidase, catalytic domain CAB38_13400 PF13344 Haloacid dehalogenase-like hydrolase CAB38_13400 PF00293 NUDIX domain CAB38_13420 PF00085 Thioredoxin CAB38_13430 PF00083 Sugar (and other) transporter CAB38_13430 PF08946 Osmosensory transporter coiled coil CAB38_13470 PF17863 AAA lid domain CAB38_13470 PF07726 ATPase family associated with various cellular activities (AAA) CAB38_13500 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CAB38_13505 PF00155 Aminotransferase class I and II CAB38_13510 PF00593 TonB dependent receptor CAB38_13510 PF07715 TonB-dependent Receptor Plug Domain CAB38_13520 PF07883 Cupin domain CAB38_13590 PF01883 Iron-sulfur cluster assembly protein CAB38_13590 PF10609 NUBPL iron-transfer P-loop NTPase CAB38_13605 PF13091 PLD-like domain CAB38_13615 PF03061 Thioesterase superfamily CAB38_13645 PF08240 Alcohol dehydrogenase GroES-like domain CAB38_13645 PF00107 Zinc-binding dehydrogenase CAB38_13655 PF02673 Bacitracin resistance protein BacA CAB38_13665 PF00120 Glutamine synthetase, catalytic domain CAB38_13665 PF03951 Glutamine synthetase, beta-Grasp domain CAB38_13670 PF00543 Nitrogen regulatory protein P-II CAB38_13675 PF00909 Ammonium Transporter Family CAB38_13680 PF00989 PAS fold CAB38_13680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_13680 PF00512 His Kinase A (phospho-acceptor) domain CAB38_13685 PF00158 Sigma-54 interaction domain CAB38_13685 PF00072 Response regulator receiver domain CAB38_13685 PF02954 Bacterial regulatory protein, Fis family CAB38_13690 PF00080 Copper/zinc superoxide dismutase (SODC) CAB38_13695 PF00080 Copper/zinc superoxide dismutase (SODC) CAB38_13710 PF00108 Thiolase, N-terminal domain CAB38_13710 PF02803 Thiolase, C-terminal domain CAB38_13745 PF00581 Rhodanese-like domain CAB38_13750 PF02556 Preprotein translocase subunit SecB CAB38_13755 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CAB38_13755 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CAB38_13800 PF01313 Bacterial export proteins, family 3 CAB38_13815 PF00771 FHIPEP family CAB38_13820 PF00460 Flagella basal body rod protein CAB38_13820 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CAB38_13825 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CAB38_13825 PF00460 Flagella basal body rod protein CAB38_13840 PF02119 Flagellar P-ring protein CAB38_13855 PF02049 Flagellar hook-basal body complex protein FliE CAB38_13860 PF01514 Secretory protein of YscJ/FliF family CAB38_13860 PF08345 Flagellar M-ring protein C-terminal CAB38_13875 PF18269 T3SS EscN ATPase C-terminal domain CAB38_13875 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CAB38_13875 PF02874 ATP synthase alpha/beta family, beta-barrel domain CAB38_13900 PF03963 Flagellar hook capping protein - N-terminal region CAB38_13905 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CAB38_13905 PF07559 Flagellar basal body protein FlaE CAB38_13905 PF00460 Flagella basal body rod protein CAB38_13915 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CAB38_13925 PF00813 FliP family CAB38_13930 PF04545 Sigma-70, region 4 CAB38_13930 PF04539 Sigma-70 region 3 CAB38_13930 PF04542 Sigma-70 region 2 CAB38_13930 PF00140 Sigma-70 factor, region 1.2 CAB38_13935 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CAB38_13935 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CAB38_13935 PF00205 Thiamine pyrophosphate enzyme, central domain CAB38_13940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_13945 PF00072 Response regulator receiver domain CAB38_13945 PF00158 Sigma-54 interaction domain CAB38_13945 PF02954 Bacterial regulatory protein, Fis family CAB38_13960 PF07690 Major Facilitator Superfamily CAB38_13965 PF00588 SpoU rRNA Methylase family CAB38_13980 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CAB38_13980 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CAB38_13985 PF13784 Fic/DOC family N-terminal CAB38_13985 PF02661 Fic/DOC family CAB38_13990 PF00561 alpha/beta hydrolase fold CAB38_13995 PF03692 Putative zinc- or iron-chelating domain CAB38_14000 PF00501 AMP-binding enzyme CAB38_14005 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family CAB38_14020 PF07478 D-ala D-ala ligase C-terminus CAB38_14020 PF01820 D-ala D-ala ligase N-terminus CAB38_14030 PF03109 ABC1 family CAB38_14040 PF00849 RNA pseudouridylate synthase CAB38_14050 PF00472 RF-1 domain CAB38_14060 PF01112 Asparaginase CAB38_14065 PF01432 Peptidase family M3 CAB38_14070 PF12706 Beta-lactamase superfamily domain CAB38_14090 PF12833 Helix-turn-helix domain CAB38_14095 PF00999 Sodium/hydrogen exchanger family CAB38_14100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB38_14100 PF03466 LysR substrate binding domain CAB38_14105 PF01274 Malate synthase CAB38_14110 PF00463 Isocitrate lyase family CAB38_14115 PF00990 Diguanylate cyclase, GGDEF domain CAB38_14150 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CAB38_14150 PF18140 Propionyl-coenzyme A carboxylase BT domain CAB38_14150 PF02785 Biotin carboxylase C-terminal domain CAB38_14150 PF00289 Biotin carboxylase, N-terminal domain CAB38_14150 PF00364 Biotin-requiring enzyme CAB38_14155 PF01039 Carboxyl transferase domain CAB38_14160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CAB38_14160 PF02770 Acyl-CoA dehydrogenase, middle domain CAB38_14160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CAB38_14165 PF17932 Tetracyclin repressor-like, C-terminal domain CAB38_14165 PF00440 Bacterial regulatory proteins, tetR family CAB38_14220 PF02492 CobW/HypB/UreG, nucleotide-binding domain CAB38_14220 PF07683 Cobalamin synthesis protein cobW C-terminal domain CAB38_14240 PF03969 AFG1-like ATPase CAB38_14245 PF01047 MarR family CAB38_14250 PF02566 OsmC-like protein CAB38_14280 PF16884 N-terminal domain of oxidoreductase CAB38_14280 PF00107 Zinc-binding dehydrogenase CAB38_14285 PF00248 Aldo/keto reductase family CAB38_14295 PF00849 RNA pseudouridylate synthase CAB38_14315 PF07308 Protein of unknown function (DUF1456) CAB38_14320 PF00576 HIUase/Transthyretin family CAB38_14325 PF13454 FAD-NAD(P)-binding CAB38_14330 PF09349 OHCU decarboxylase CAB38_14330 PF01014 Uricase CAB38_14345 PF00266 Aminotransferase class-V CAB38_14350 PF07687 Peptidase dimerisation domain CAB38_14350 PF01546 Peptidase family M20/M25/M40 CAB38_14355 PF03466 LysR substrate binding domain CAB38_14355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB38_14360 PF07690 Major Facilitator Superfamily CAB38_14375 PF01425 Amidase CAB38_14380 PF01156 Inosine-uridine preferring nucleoside hydrolase CAB38_14390 PF00860 Permease family CAB38_14400 PF00111 2Fe-2S iron-sulfur cluster binding domain CAB38_14405 PF00355 Rieske [2Fe-2S] domain CAB38_14410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB38_14410 PF03466 LysR substrate binding domain CAB38_14415 PF01026 TatD related DNase CAB38_14435 PF03466 LysR substrate binding domain CAB38_14435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB38_14440 PF07690 Major Facilitator Superfamily CAB38_14455 PF02146 Sir2 family CAB38_14460 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CAB38_14465 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CAB38_14465 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CAB38_14475 PF00551 Formyl transferase CAB38_14480 PF00486 Transcriptional regulatory protein, C terminal CAB38_14480 PF00072 Response regulator receiver domain CAB38_14485 PF00512 His Kinase A (phospho-acceptor) domain CAB38_14485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_14485 PF00672 HAMP domain CAB38_14490 PF00529 HlyD membrane-fusion protein of T1SS CAB38_14490 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CAB38_14495 PF00873 AcrB/AcrD/AcrF family CAB38_14500 PF02321 Outer membrane efflux protein CAB38_14515 PF02677 Epoxyqueuosine reductase QueH CAB38_14520 PF03466 LysR substrate binding domain CAB38_14520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB38_14525 PF03358 NADPH-dependent FMN reductase CAB38_14535 PF08267 Cobalamin-independent synthase, N-terminal domain CAB38_14535 PF01717 Cobalamin-independent synthase, Catalytic domain CAB38_14540 PF03812 2-keto-3-deoxygluconate permease CAB38_14555 PF05368 NmrA-like family CAB38_14560 PF01638 HxlR-like helix-turn-helix CAB38_14605 PF00920 Dehydratase family CAB38_14620 PF00132 Bacterial transferase hexapeptide (six repeats) CAB38_14630 PF07690 Major Facilitator Superfamily CAB38_14635 PF11871 Domain of unknown function (DUF3391) CAB38_14635 PF01966 HD domain CAB38_14660 PF00171 Aldehyde dehydrogenase family CAB38_14670 PF01494 FAD binding domain CAB38_14680 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CAB38_14680 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CAB38_14685 PF00230 Major intrinsic protein CAB38_14690 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CAB38_14690 PF01266 FAD dependent oxidoreductase CAB38_14695 PF00455 DeoR C terminal sensor domain CAB38_14695 PF08220 DeoR-like helix-turn-helix domain CAB38_14705 PF00970 Oxidoreductase FAD-binding domain CAB38_14705 PF00111 2Fe-2S iron-sulfur cluster binding domain CAB38_14710 PF00355 Rieske [2Fe-2S] domain CAB38_14715 PF01144 Coenzyme A transferase CAB38_14720 PF01144 Coenzyme A transferase CAB38_14725 PF00108 Thiolase, N-terminal domain CAB38_14725 PF02803 Thiolase, C-terminal domain CAB38_14730 PF00775 Dioxygenase CAB38_14730 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal CAB38_14740 PF10397 Adenylosuccinate lyase C-terminus CAB38_14740 PF00206 Lyase CAB38_14745 PF12146 Serine aminopeptidase, S33 CAB38_14750 PF02627 Carboxymuconolactone decarboxylase family CAB38_14760 PF09339 IclR helix-turn-helix domain CAB38_14760 PF01614 Bacterial transcriptional regulator CAB38_14770 PF07859 alpha/beta hydrolase fold CAB38_14775 PF10677 Protein of unknown function (DUF2490) CAB38_14780 PF13932 GidA associated domain CAB38_14780 PF01134 Glucose inhibited division protein A CAB38_14790 PF00291 Pyridoxal-phosphate dependent enzyme CAB38_14815 PF13649 Methyltransferase domain CAB38_14825 PF12697 Alpha/beta hydrolase family CAB38_14840 PF04055 Radical SAM superfamily CAB38_14840 PF06968 Biotin and Thiamin Synthesis associated domain CAB38_14850 PF01040 UbiA prenyltransferase family CAB38_14880 PF05819 NolX protein CAB38_14915 PF01313 Bacterial export proteins, family 3 CAB38_14920 PF00813 FliP family CAB38_14935 PF00771 FHIPEP family CAB38_14940 PF01312 FlhB HrpN YscU SpaS Family CAB38_14955 PF01514 Secretory protein of YscJ/FliF family CAB38_14970 PF18269 T3SS EscN ATPase C-terminal domain CAB38_14970 PF02874 ATP synthase alpha/beta family, beta-barrel domain CAB38_14970 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CAB38_14980 PF01311 Bacterial export proteins, family 1 CAB38_14985 PF03958 Bacterial type II/III secretion system short domain CAB38_14985 PF00263 Bacterial type II and III secretion system protein CAB38_14995 PF01464 Transglycosylase SLT domain CAB38_15010 PF12795 Mechanosensitive ion channel porin domain CAB38_15010 PF00924 Mechanosensitive ion channel CAB38_15010 PF12794 Mechanosensitive ion channel inner membrane domain 1 CAB38_15015 PF00884 Sulfatase CAB38_15025 PF03109 ABC1 family CAB38_15030 PF05661 Protein of unknown function (DUF808) CAB38_15035 PF00990 Diguanylate cyclase, GGDEF domain CAB38_15035 PF00072 Response regulator receiver domain CAB38_15040 PF00534 Glycosyl transferases group 1 CAB38_15040 PF08323 Starch synthase catalytic domain CAB38_15045 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CAB38_15045 PF00128 Alpha amylase, catalytic domain CAB38_15045 PF02806 Alpha amylase, C-terminal all-beta domain CAB38_15050 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CAB38_15050 PF11941 Domain of unknown function (DUF3459) CAB38_15050 PF00128 Alpha amylase, catalytic domain CAB38_15055 PF02446 4-alpha-glucanotransferase CAB38_15060 PF00128 Alpha amylase, catalytic domain CAB38_15070 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CAB38_15070 PF00128 Alpha amylase, catalytic domain CAB38_15075 PF13460 NAD(P)H-binding CAB38_15095 PF06903 VirK protein CAB38_15100 PF02321 Outer membrane efflux protein CAB38_15115 PF00873 AcrB/AcrD/AcrF family CAB38_15135 PF00271 Helicase conserved C-terminal domain CAB38_15135 PF00270 DEAD/DEAH box helicase CAB38_15140 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CAB38_15140 PF00364 Biotin-requiring enzyme CAB38_15140 PF02817 e3 binding domain CAB38_15150 PF02779 Transketolase, pyrimidine binding domain CAB38_15150 PF02780 Transketolase, C-terminal domain CAB38_15155 PF00676 Dehydrogenase E1 component CAB38_15165 PF03301 Tryptophan 2,3-dioxygenase CAB38_15170 PF00854 POT family CAB38_15180 PF01047 MarR family CAB38_15185 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CAB38_15195 PF04209 homogentisate 1,2-dioxygenase CAB38_15215 PF03334 Na+/H+ antiporter subunit CAB38_15220 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CAB38_15230 PF00361 Proton-conducting membrane transporter CAB38_15235 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CAB38_15240 PF13244 Domain of unknown function (DUF4040) CAB38_15240 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CAB38_15240 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CAB38_15240 PF00361 Proton-conducting membrane transporter CAB38_15255 PF02868 Thermolysin metallopeptidase, alpha-helical domain CAB38_15255 PF07504 Fungalysin/Thermolysin Propeptide Motif CAB38_15255 PF01483 Proprotein convertase P-domain CAB38_15255 PF01447 Thermolysin metallopeptidase, catalytic domain CAB38_15265 PF00182 Chitinase class I CAB38_15285 PF01259 SAICAR synthetase CAB38_15290 PF00226 DnaJ domain CAB38_15290 PF05099 Tellurite resistance protein TerB CAB38_15300 PF00834 Ribulose-phosphate 3 epimerase family CAB38_15305 PF00583 Acetyltransferase (GNAT) family CAB38_15310 PF00781 Diacylglycerol kinase catalytic domain CAB38_15315 PF00425 chorismate binding enzyme CAB38_15315 PF04715 Anthranilate synthase component I, N terminal region CAB38_15325 PF00117 Glutamine amidotransferase class-I CAB38_15335 PF02885 Glycosyl transferase family, helical bundle domain CAB38_15335 PF00591 Glycosyl transferase family, a/b domain CAB38_15340 PF00218 Indole-3-glycerol phosphate synthase CAB38_15350 PF00325 Bacterial regulatory proteins, crp family CAB38_15350 PF00027 Cyclic nucleotide-binding domain CAB38_15355 PF02675 S-adenosylmethionine decarboxylase CAB38_15360 PF00893 Small Multidrug Resistance protein CAB38_15365 PF03232 Ubiquinone biosynthesis protein COQ7 CAB38_15370 PF00572 Ribosomal protein L13 CAB38_15375 PF00380 Ribosomal protein S9/S16 CAB38_15390 PF00293 NUDIX domain CAB38_15400 PF00210 Ferritin-like domain CAB38_15405 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CAB38_15405 PF01627 Hpt domain CAB38_15405 PF00672 HAMP domain CAB38_15405 PF00072 Response regulator receiver domain CAB38_15405 PF00512 His Kinase A (phospho-acceptor) domain CAB38_15405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_15410 PF00072 Response regulator receiver domain CAB38_15410 PF00486 Transcriptional regulatory protein, C terminal CAB38_15430 PF01521 Iron-sulphur cluster biosynthesis CAB38_15445 PF09297 NADH pyrophosphatase zinc ribbon domain CAB38_15445 PF00293 NUDIX domain CAB38_15445 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain CAB38_15450 PF03186 CobD/Cbib protein CAB38_15450 PF17113 Regulatory signalling modulator protein AmpE CAB38_15470 PF07690 Major Facilitator Superfamily CAB38_15475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB38_15475 PF03466 LysR substrate binding domain CAB38_15480 PF07690 Major Facilitator Superfamily CAB38_15485 PF12805 FUSC-like inner membrane protein yccS CAB38_15495 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CAB38_15495 PF02843 Phosphoribosylglycinamide synthetase, C domain CAB38_15495 PF02844 Phosphoribosylglycinamide synthetase, N domain CAB38_15505 PF01808 AICARFT/IMPCHase bienzyme CAB38_15505 PF02142 MGS-like domain CAB38_15510 PF01066 CDP-alcohol phosphatidyltransferase CAB38_15515 PF12147 Putative methyltransferase CAB38_15515 PF12146 Serine aminopeptidase, S33 CAB38_15520 PF00782 Dual specificity phosphatase, catalytic domain CAB38_15550 PF02954 Bacterial regulatory protein, Fis family CAB38_15565 PF01381 Helix-turn-helix CAB38_15595 PF00289 Biotin carboxylase, N-terminal domain CAB38_15595 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CAB38_15595 PF02785 Biotin carboxylase C-terminal domain CAB38_15605 PF00364 Biotin-requiring enzyme CAB38_15610 PF01220 Dehydroquinase class II CAB38_15615 PF02683 Cytochrome C biogenesis protein transmembrane region CAB38_15615 PF11412 Disulphide bond corrector protein DsbC CAB38_15620 PF03091 CutA1 divalent ion tolerance protein CAB38_15635 PF01852 START domain CAB38_15650 PF00106 short chain dehydrogenase CAB38_15660 PF04231 Endonuclease I CAB38_15665 PF00166 Chaperonin 10 Kd subunit CAB38_15670 PF00118 TCP-1/cpn60 chaperonin family CAB38_15680 PF07715 TonB-dependent Receptor Plug Domain CAB38_15680 PF00593 TonB dependent receptor CAB38_15685 PF00793 DAHP synthetase I family CAB38_15700 PF08450 SMP-30/Gluconolactonase/LRE-like region CAB38_15710 PF08335 GlnD PII-uridylyltransferase CAB38_15710 PF03710 Glutamate-ammonia ligase adenylyltransferase CAB38_15715 PF02592 Putative vitamin uptake transporter CAB38_15735 PF00881 Nitroreductase family CAB38_15740 PF04264 YceI-like domain CAB38_15765 PF16957 Malonate decarboxylase, alpha subunit, transporter CAB38_15770 PF06857 Malonate decarboxylase delta subunit (MdcD) CAB38_15775 PF01039 Carboxyl transferase domain CAB38_15785 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG CAB38_15805 PF00392 Bacterial regulatory proteins, gntR family CAB38_15805 PF07729 FCD domain CAB38_15810 PF13419 Haloacid dehalogenase-like hydrolase CAB38_15840 PF07745 Glycosyl hydrolase family 53 CAB38_15845 PF17831 Pyruvate dehydrogenase E1 component middle domain CAB38_15845 PF00456 Transketolase, thiamine diphosphate binding domain CAB38_15855 PF05598 Transposase domain (DUF772) CAB38_15930 PF00106 short chain dehydrogenase CAB38_15945 PF00106 short chain dehydrogenase CAB38_15960 PF13409 Glutathione S-transferase, N-terminal domain CAB38_15985 PF03176 MMPL family CAB38_15985 PF12823 Domain of unknown function (DUF3817) CAB38_15995 PF00326 Prolyl oligopeptidase family CAB38_15995 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CAB38_16005 PF07759 Protein of unknown function (DUF1615) CAB38_16015 PF00990 Diguanylate cyclase, GGDEF domain CAB38_16015 PF05230 MASE2 domain CAB38_16040 PF00892 EamA-like transporter family CAB38_16045 PF00497 Bacterial extracellular solute-binding proteins, family 3 CAB38_16055 PF00324 Amino acid permease CAB38_16065 PF01544 CorA-like Mg2+ transporter protein CAB38_16075 PF01204 Trehalase CAB38_16125 PF00990 Diguanylate cyclase, GGDEF domain CAB38_16125 PF08447 PAS fold CAB38_16125 PF00563 EAL domain CAB38_16125 PF08448 PAS fold CAB38_16135 PF00672 HAMP domain CAB38_16135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAB38_16135 PF02203 Tar ligand binding domain homologue CAB38_16140 PF00150 Cellulase (glycosyl hydrolase family 5) CAB38_16140 PF00553 Cellulose binding domain CAB38_16145 PF00916 Sulfate permease family CAB38_16145 PF01740 STAS domain CAB38_16155 PF00990 Diguanylate cyclase, GGDEF domain CAB38_16155 PF08448 PAS fold CAB38_16175 PF13632 Glycosyl transferase family group 2 CAB38_16185 PF06580 Histidine kinase CAB38_16185 PF07694 5TMR of 5TMR-LYT CAB38_16190 PF00072 Response regulator receiver domain CAB38_16190 PF04397 LytTr DNA-binding domain CAB38_16195 PF03900 Porphobilinogen deaminase, C-terminal domain CAB38_16195 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CAB38_16235 PF00326 Prolyl oligopeptidase family CAB38_16235 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CAB38_16245 PF00155 Aminotransferase class I and II CAB38_16250 PF00326 Prolyl oligopeptidase family CAB38_16250 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CAB38_16255 PF04304 Protein of unknown function (DUF454) CAB38_16265 PF01678 Diaminopimelate epimerase CAB38_16275 PF02899 Phage integrase, N-terminal SAM-like domain CAB38_16275 PF00589 Phage integrase family CAB38_16280 PF00227 Proteasome subunit CAB38_16285 PF07724 AAA domain (Cdc48 subfamily) CAB38_16285 PF10431 C-terminal, D2-small domain, of ClpB protein CAB38_16285 PF00004 ATPase family associated with various cellular activities (AAA) CAB38_16295 PF13673 Acetyltransferase (GNAT) domain CAB38_16300 PF13533 Biotin-lipoyl like CAB38_16310 PF01209 ubiE/COQ5 methyltransferase family CAB38_16315 PF00990 Diguanylate cyclase, GGDEF domain CAB38_16315 PF17156 Gammaproteobacterial periplasmic sensor domain CAB38_16320 PF01433 Peptidase family M1 domain CAB38_16320 PF11838 ERAP1-like C-terminal domain CAB38_16355 PF03275 UDP-galactopyranose mutase CAB38_16365 PF16363 GDP-mannose 4,6 dehydratase CAB38_16390 PF02322 Cytochrome bd terminal oxidase subunit II CAB38_16395 PF01654 Cytochrome bd terminal oxidase subunit I CAB38_16410 PF00158 Sigma-54 interaction domain CAB38_16410 PF02954 Bacterial regulatory protein, Fis family CAB38_16410 PF00072 Response regulator receiver domain CAB38_16425 PF01739 CheR methyltransferase, SAM binding domain CAB38_16425 PF03705 CheR methyltransferase, all-alpha domain CAB38_16425 PF08448 PAS fold CAB38_16425 PF01339 CheB methylesterase CAB38_16445 PF05067 Manganese containing catalase CAB38_16450 PF05974 Domain of unknown function (DUF892) CAB38_16475 PF00672 HAMP domain CAB38_16475 PF02743 Cache domain CAB38_16475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_16475 PF06580 Histidine kinase CAB38_16480 PF00072 Response regulator receiver domain CAB38_16480 PF04397 LytTr DNA-binding domain CAB38_16490 PF13520 Amino acid permease CAB38_16510 PF01431 Peptidase family M13 CAB38_16510 PF05649 Peptidase family M13 CAB38_16515 PF00535 Glycosyl transferase family 2 CAB38_16525 PF00248 Aldo/keto reductase family CAB38_16530 PF03358 NADPH-dependent FMN reductase CAB38_16535 PF03466 LysR substrate binding domain CAB38_16535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB38_16545 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CAB38_16555 PF03167 Uracil DNA glycosylase superfamily CAB38_16560 PF02469 Fasciclin domain CAB38_16570 PF00999 Sodium/hydrogen exchanger family CAB38_16575 PF00005 ABC transporter CAB38_16580 PF01061 ABC-2 type transporter CAB38_16610 PF00691 OmpA family CAB38_16610 PF13677 Membrane MotB of proton-channel complex MotA/MotB CAB38_16615 PF01618 MotA/TolQ/ExbB proton channel family CAB38_16635 PF01037 Lrp/AsnC ligand binding domain CAB38_16640 PF01266 FAD dependent oxidoreductase CAB38_16645 PF00842 Alanine racemase, C-terminal domain CAB38_16645 PF01168 Alanine racemase, N-terminal domain CAB38_16665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_16665 PF00989 PAS fold CAB38_16665 PF00512 His Kinase A (phospho-acceptor) domain CAB38_16685 PF05175 Methyltransferase small domain CAB38_16685 PF08468 Methyltransferase small domain N-terminal CAB38_16690 PF01479 S4 domain CAB38_16690 PF00849 RNA pseudouridylate synthase CAB38_16695 PF13419 Haloacid dehalogenase-like hydrolase CAB38_16720 PF00989 PAS fold CAB38_16720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_16720 PF00072 Response regulator receiver domain CAB38_16720 PF00512 His Kinase A (phospho-acceptor) domain CAB38_16720 PF18415 Histidine kinase receptor ArcB trans-membrane domain CAB38_16720 PF01627 Hpt domain CAB38_16730 PF04461 Protein of unknown function (DUF520) CAB38_16735 PF00892 EamA-like transporter family CAB38_16740 PF00005 ABC transporter CAB38_16740 PF09383 NIL domain CAB38_16745 PF00528 Binding-protein-dependent transport system inner membrane component CAB38_16750 PF03180 NLPA lipoprotein CAB38_16790 PF00364 Biotin-requiring enzyme CAB38_16790 PF02817 e3 binding domain CAB38_16790 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CAB38_16800 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CAB38_16800 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAB38_16820 PF00119 ATP synthase A chain CAB38_16825 PF00137 ATP synthase subunit C CAB38_16830 PF00430 ATP synthase B/B' CF(0) CAB38_16835 PF00213 ATP synthase delta (OSCP) subunit CAB38_16840 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CAB38_16840 PF00306 ATP synthase alpha/beta chain, C terminal domain CAB38_16840 PF02874 ATP synthase alpha/beta family, beta-barrel domain CAB38_16845 PF00231 ATP synthase CAB38_16850 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CAB38_16850 PF02874 ATP synthase alpha/beta family, beta-barrel domain CAB38_16855 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CAB38_16855 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CAB38_16870 PF00132 Bacterial transferase hexapeptide (six repeats) CAB38_16870 PF12804 MobA-like NTP transferase domain CAB38_16870 PF14602 Hexapeptide repeat of succinyl-transferase CAB38_16875 PF00512 His Kinase A (phospho-acceptor) domain CAB38_16875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_16880 PF02954 Bacterial regulatory protein, Fis family CAB38_16880 PF00072 Response regulator receiver domain CAB38_16880 PF00158 Sigma-54 interaction domain CAB38_16890 PF12704 MacB-like periplasmic core domain CAB38_16890 PF02687 FtsX-like permease family CAB38_16895 PF12704 MacB-like periplasmic core domain CAB38_16895 PF02687 FtsX-like permease family CAB38_16900 PF02687 FtsX-like permease family CAB38_16900 PF00005 ABC transporter CAB38_16900 PF12704 MacB-like periplasmic core domain CAB38_16905 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CAB38_16910 PF01380 SIS domain CAB38_16940 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CAB38_16945 PF05275 Copper resistance protein B precursor (CopB) CAB38_16950 PF07732 Multicopper oxidase CAB38_16950 PF00394 Multicopper oxidase CAB38_16950 PF07731 Multicopper oxidase CAB38_16965 PF01432 Peptidase family M3 CAB38_16975 PF00109 Beta-ketoacyl synthase, N-terminal domain CAB38_16975 PF02801 Beta-ketoacyl synthase, C-terminal domain CAB38_16980 PF07977 FabA-like domain CAB38_16985 PF11799 impB/mucB/samB family C-terminal domain CAB38_16985 PF00817 impB/mucB/samB family CAB38_16990 PF13419 Haloacid dehalogenase-like hydrolase CAB38_16995 PF00593 TonB dependent receptor CAB38_16995 PF07715 TonB-dependent Receptor Plug Domain CAB38_17000 PF00756 Putative esterase CAB38_17010 PF13185 GAF domain CAB38_17030 PF01242 6-pyruvoyl tetrahydropterin synthase CAB38_17040 PF07715 TonB-dependent Receptor Plug Domain CAB38_17040 PF00593 TonB dependent receptor CAB38_17050 PF00271 Helicase conserved C-terminal domain CAB38_17050 PF00270 DEAD/DEAH box helicase CAB38_17065 PF02798 Glutathione S-transferase, N-terminal domain CAB38_17065 PF14497 Glutathione S-transferase, C-terminal domain CAB38_17070 PF00437 Type II/IV secretion system protein CAB38_17090 PF00291 Pyridoxal-phosphate dependent enzyme CAB38_17090 PF00571 CBS domain CAB38_17095 PF01053 Cys/Met metabolism PLP-dependent enzyme CAB38_17105 PF14524 Wzt C-terminal domain CAB38_17105 PF00005 ABC transporter CAB38_17115 PF00535 Glycosyl transferase family 2 CAB38_17135 PF00912 Transglycosylase CAB38_17135 PF00905 Penicillin binding protein transpeptidase domain CAB38_17135 PF17092 Penicillin-binding protein OB-like domain CAB38_17160 PF07660 Secretin and TonB N terminus short domain CAB38_17160 PF03958 Bacterial type II/III secretion system short domain CAB38_17160 PF00263 Bacterial type II and III secretion system protein CAB38_17160 PF11741 AMIN domain CAB38_17165 PF17863 AAA lid domain CAB38_17165 PF07726 ATPase family associated with various cellular activities (AAA) CAB38_17185 PF07584 Aerotolerance regulator N-terminal CAB38_17185 PF00092 von Willebrand factor type A domain CAB38_17200 PF00375 Sodium:dicarboxylate symporter family CAB38_17205 PF02779 Transketolase, pyrimidine binding domain CAB38_17205 PF00456 Transketolase, thiamine diphosphate binding domain CAB38_17205 PF02780 Transketolase, C-terminal domain CAB38_17210 PF12146 Serine aminopeptidase, S33 CAB38_17215 PF07715 TonB-dependent Receptor Plug Domain CAB38_17215 PF00593 TonB dependent receptor CAB38_17225 PF01551 Peptidase family M23 CAB38_17225 PF04225 Opacity-associated protein A LysM-like domain CAB38_17230 PF01476 LysM domain CAB38_17230 PF03734 L,D-transpeptidase catalytic domain CAB38_17265 PF03459 TOBE domain CAB38_17265 PF00005 ABC transporter CAB38_17270 PF00528 Binding-protein-dependent transport system inner membrane component CAB38_17280 PF00753 Metallo-beta-lactamase superfamily CAB38_17280 PF04273 Putative phosphatase (DUF442) CAB38_17290 PF03922 OmpW family CAB38_17295 PF03922 OmpW family CAB38_17360 PF00034 Cytochrome c CAB38_17360 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CAB38_17360 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CAB38_17370 PF00107 Zinc-binding dehydrogenase CAB38_17370 PF08240 Alcohol dehydrogenase GroES-like domain CAB38_17380 PF00158 Sigma-54 interaction domain CAB38_17380 PF02954 Bacterial regulatory protein, Fis family CAB38_17380 PF01590 GAF domain CAB38_17385 PF00294 pfkB family carbohydrate kinase CAB38_17395 PF04085 rod shape-determining protein MreC CAB38_17405 PF00905 Penicillin binding protein transpeptidase domain CAB38_17405 PF03717 Penicillin-binding Protein dimerisation domain CAB38_17410 PF01098 Cell cycle protein CAB38_17415 PF00295 Glycosyl hydrolases family 28 CAB38_17420 PF13406 Transglycosylase SLT domain CAB38_17425 PF05036 Sporulation related domain CAB38_17425 PF03330 Lytic transglycolase CAB38_17435 PF07943 Penicillin-binding protein 5, C-terminal domain CAB38_17435 PF00768 D-alanyl-D-alanine carboxypeptidase CAB38_17445 PF04359 Protein of unknown function (DUF493) CAB38_17450 PF03099 Biotin/lipoate A/B protein ligase family CAB38_17455 PF04055 Radical SAM superfamily CAB38_17455 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CAB38_17460 PF17804 Tail specific protease N-terminal domain CAB38_17460 PF11818 C-terminal domain of tail specific protease (DUF3340) CAB38_17460 PF00595 PDZ domain CAB38_17460 PF03572 Peptidase family S41 CAB38_17470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB38_17470 PF03466 LysR substrate binding domain CAB38_17480 PF01467 Cytidylyltransferase-like CAB38_17480 PF00293 NUDIX domain CAB38_17515 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CAB38_17515 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CAB38_17520 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CAB38_17520 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CAB38_17525 PF04972 BON domain CAB38_17530 PF08446 PAS fold CAB38_17530 PF00512 His Kinase A (phospho-acceptor) domain CAB38_17530 PF00360 Phytochrome region CAB38_17530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_17530 PF01590 GAF domain CAB38_17535 PF00072 Response regulator receiver domain CAB38_17540 PF00512 His Kinase A (phospho-acceptor) domain CAB38_17540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_17545 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CAB38_17595 PF00263 Bacterial type II and III secretion system protein CAB38_17595 PF03958 Bacterial type II/III secretion system short domain CAB38_17600 PF00437 Type II/IV secretion system protein CAB38_17605 PF00482 Type II secretion system (T2SS), protein F CAB38_17610 PF08334 Type II secretion system (T2SS), protein G CAB38_17610 PF07963 Prokaryotic N-terminal methylation motif CAB38_17615 PF12019 Type II transport protein GspH CAB38_17615 PF07963 Prokaryotic N-terminal methylation motif CAB38_17620 PF02501 Type II secretion system (T2SS), protein I CAB38_17620 PF07963 Prokaryotic N-terminal methylation motif CAB38_17625 PF11612 Type II secretion system (T2SS), protein J CAB38_17625 PF07963 Prokaryotic N-terminal methylation motif CAB38_17630 PF03934 Type II secretion system (T2SS), protein K CAB38_17655 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CAB38_17655 PF02837 Glycosyl hydrolases family 2, sugar binding domain CAB38_17655 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 CAB38_17655 PF16355 Domain of unknown function (DUF4982) CAB38_17655 PF00703 Glycosyl hydrolases family 2 CAB38_17670 PF00392 Bacterial regulatory proteins, gntR family CAB38_17670 PF07702 UTRA domain CAB38_17675 PF07690 Major Facilitator Superfamily CAB38_17680 PF00356 Bacterial regulatory proteins, lacI family CAB38_17685 PF01380 SIS domain CAB38_17690 PF01979 Amidohydrolase family CAB38_17700 PF01966 HD domain CAB38_17700 PF01743 Poly A polymerase head domain CAB38_17700 PF12627 Probable RNA and SrmB- binding site of polymerase A CAB38_17705 PF00732 GMC oxidoreductase CAB38_17705 PF05199 GMC oxidoreductase CAB38_17710 PF00171 Aldehyde dehydrogenase family CAB38_17740 PF00034 Cytochrome c CAB38_17745 PF01926 50S ribosome-binding GTPase CAB38_17750 PF00753 Metallo-beta-lactamase superfamily CAB38_17750 PF10996 Beta-Casp domain CAB38_17750 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CAB38_17765 PF04107 Glutamate-cysteine ligase family 2(GCS2) CAB38_17770 PF00512 His Kinase A (phospho-acceptor) domain CAB38_17770 PF00672 HAMP domain CAB38_17770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_17775 PF00486 Transcriptional regulatory protein, C terminal CAB38_17775 PF00072 Response regulator receiver domain CAB38_17790 PF02583 Metal-sensitive transcriptional repressor CAB38_17795 PF08240 Alcohol dehydrogenase GroES-like domain CAB38_17795 PF00107 Zinc-binding dehydrogenase CAB38_17800 PF04828 Glutathione-dependent formaldehyde-activating enzyme CAB38_17805 PF00756 Putative esterase CAB38_17815 PF00155 Aminotransferase class I and II CAB38_17815 PF00392 Bacterial regulatory proteins, gntR family CAB38_17820 PF02567 Phenazine biosynthesis-like protein CAB38_17825 PF00892 EamA-like transporter family CAB38_17835 PF00005 ABC transporter CAB38_17835 PF12848 ABC transporter CAB38_17845 PF00464 Serine hydroxymethyltransferase CAB38_17850 PF03477 ATP cone domain CAB38_17860 PF01872 RibD C-terminal domain CAB38_17860 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CAB38_17870 PF00677 Lumazine binding domain CAB38_17875 PF00925 GTP cyclohydrolase II CAB38_17875 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CAB38_17880 PF00885 6,7-dimethyl-8-ribityllumazine synthase CAB38_17885 PF01029 NusB family CAB38_17890 PF02769 AIR synthase related protein, C-terminal domain CAB38_17890 PF00586 AIR synthase related protein, N-terminal domain CAB38_17915 PF03814 Potassium-transporting ATPase A subunit CAB38_17925 PF02669 K+-transporting ATPase, c chain CAB38_17930 PF13492 GAF domain CAB38_17930 PF02702 Osmosensitive K+ channel His kinase sensor domain CAB38_17930 PF00512 His Kinase A (phospho-acceptor) domain CAB38_17930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_17930 PF13493 Domain of unknown function (DUF4118) CAB38_17935 PF00072 Response regulator receiver domain CAB38_17935 PF00486 Transcriptional regulatory protein, C terminal CAB38_17950 PF05598 Transposase domain (DUF772) CAB38_17960 PF02913 FAD linked oxidases, C-terminal domain CAB38_17960 PF01565 FAD binding domain CAB38_17965 PF04307 LexA-binding, inner membrane-associated putative hydrolase CAB38_17970 PF02021 Uncharacterised protein family UPF0102 CAB38_17980 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CAB38_18005 PF02381 MraZ protein, putative antitoxin-like CAB38_18010 PF01795 MraW methylase family CAB38_18015 PF04999 Cell division protein FtsL CAB38_18020 PF03717 Penicillin-binding Protein dimerisation domain CAB38_18020 PF00905 Penicillin binding protein transpeptidase domain CAB38_18025 PF08245 Mur ligase middle domain CAB38_18025 PF02875 Mur ligase family, glutamate ligase domain CAB38_18025 PF01225 Mur ligase family, catalytic domain CAB38_18030 PF01225 Mur ligase family, catalytic domain CAB38_18030 PF02875 Mur ligase family, glutamate ligase domain CAB38_18030 PF08245 Mur ligase middle domain CAB38_18035 PF00953 Glycosyl transferase family 4 CAB38_18040 PF01098 Cell cycle protein CAB38_18045 PF04101 Glycosyltransferase family 28 C-terminal domain CAB38_18045 PF03033 Glycosyltransferase family 28 N-terminal domain CAB38_18050 PF02875 Mur ligase family, glutamate ligase domain CAB38_18050 PF01225 Mur ligase family, catalytic domain CAB38_18050 PF08245 Mur ligase middle domain CAB38_18055 PF07478 D-ala D-ala ligase C-terminus CAB38_18055 PF01820 D-ala D-ala ligase N-terminus CAB38_18060 PF08478 POTRA domain, FtsQ-type CAB38_18060 PF03799 Cell division protein FtsQ CAB38_18065 PF02491 SHS2 domain inserted in FTSA CAB38_18070 PF00091 Tubulin/FtsZ family, GTPase domain CAB38_18070 PF12327 FtsZ family, C-terminal domain CAB38_18075 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CAB38_18090 PF07517 SecA DEAD-like domain CAB38_18090 PF02810 SEC-C motif CAB38_18090 PF07516 SecA Wing and Scaffold domain CAB38_18090 PF01043 SecA preprotein cross-linking domain CAB38_18095 PF00293 NUDIX domain CAB38_18105 PF02219 Methylenetetrahydrofolate reductase CAB38_18120 PF00698 Acyl transferase domain CAB38_18120 PF08240 Alcohol dehydrogenase GroES-like domain CAB38_18120 PF00107 Zinc-binding dehydrogenase CAB38_18120 PF16197 Ketoacyl-synthetase C-terminal extension CAB38_18120 PF00109 Beta-ketoacyl synthase, N-terminal domain CAB38_18120 PF02801 Beta-ketoacyl synthase, C-terminal domain CAB38_18120 PF08659 KR domain CAB38_18120 PF00550 Phosphopantetheine attachment site CAB38_18120 PF14765 Polyketide synthase dehydratase CAB38_18125 PF09286 Pro-kumamolisin, activation domain CAB38_18125 PF00082 Subtilase family CAB38_18150 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CAB38_18155 PF00128 Alpha amylase, catalytic domain CAB38_18180 PF00685 Sulfotransferase domain CAB38_18190 PF13649 Methyltransferase domain CAB38_18195 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CAB38_18195 PF05221 S-adenosyl-L-homocysteine hydrolase CAB38_18205 PF00311 Phosphoenolpyruvate carboxylase CAB38_18250 PF00328 Histidine phosphatase superfamily (branch 2) CAB38_18255 PF00438 S-adenosylmethionine synthetase, N-terminal domain CAB38_18255 PF02773 S-adenosylmethionine synthetase, C-terminal domain CAB38_18255 PF02772 S-adenosylmethionine synthetase, central domain CAB38_18265 PF13649 Methyltransferase domain CAB38_18270 PF01207 Dihydrouridine synthase (Dus) CAB38_18280 PF00294 pfkB family carbohydrate kinase CAB38_18285 PF07662 Na+ dependent nucleoside transporter C-terminus CAB38_18285 PF07670 Nucleoside recognition CAB38_18285 PF01773 Na+ dependent nucleoside transporter N-terminus CAB38_18295 PF00248 Aldo/keto reductase family CAB38_18305 PF00593 TonB dependent receptor CAB38_18305 PF07715 TonB-dependent Receptor Plug Domain CAB38_18325 PF00528 Binding-protein-dependent transport system inner membrane component CAB38_18330 PF00005 ABC transporter CAB38_18340 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CAB38_18350 PF00005 ABC transporter CAB38_18355 PF13472 GDSL-like Lipase/Acylhydrolase family CAB38_18360 PF00486 Transcriptional regulatory protein, C terminal CAB38_18360 PF00072 Response regulator receiver domain CAB38_18365 PF00512 His Kinase A (phospho-acceptor) domain CAB38_18365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_18365 PF08521 Two-component sensor kinase N-terminal CAB38_18385 PF01219 Prokaryotic diacylglycerol kinase CAB38_18410 PF01790 Prolipoprotein diacylglyceryl transferase CAB38_18415 PF00303 Thymidylate synthase CAB38_18425 PF00186 Dihydrofolate reductase CAB38_18430 PF00158 Sigma-54 interaction domain CAB38_18435 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CAB38_18435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CAB38_18440 PF00005 ABC transporter CAB38_18445 PF00528 Binding-protein-dependent transport system inner membrane component CAB38_18455 PF00296 Luciferase-like monooxygenase CAB38_18460 PF03358 NADPH-dependent FMN reductase CAB38_18480 PF00296 Luciferase-like monooxygenase CAB38_18485 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CAB38_18490 PF00528 Binding-protein-dependent transport system inner membrane component CAB38_18500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CAB38_18500 PF00005 ABC transporter CAB38_18505 PF00149 Calcineurin-like phosphoesterase CAB38_18510 PF04379 ApaG domain CAB38_18515 PF00398 Ribosomal RNA adenine dimethylase CAB38_18520 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CAB38_18525 PF00639 PPIC-type PPIASE domain CAB38_18525 PF09312 SurA N-terminal domain CAB38_18530 PF04453 LPS transport system D CAB38_18530 PF03968 OstA-like protein CAB38_18535 PF00850 Histone deacetylase domain CAB38_18540 PF01923 Cobalamin adenosyltransferase CAB38_18555 PF01494 FAD binding domain CAB38_18560 PF01494 FAD binding domain CAB38_18580 PF00392 Bacterial regulatory proteins, gntR family CAB38_18580 PF07729 FCD domain CAB38_18585 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CAB38_18590 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CAB38_18590 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit CAB38_18595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB38_18595 PF03466 LysR substrate binding domain CAB38_18600 PF13193 AMP-binding enzyme C-terminal domain CAB38_18600 PF00501 AMP-binding enzyme CAB38_18605 PF00171 Aldehyde dehydrogenase family CAB38_18610 PF00378 Enoyl-CoA hydratase/isomerase CAB38_18630 PF08450 SMP-30/Gluconolactonase/LRE-like region CAB38_18635 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CAB38_18635 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CAB38_18645 PF18125 RlmM ferredoxin-like domain CAB38_18645 PF01728 FtsJ-like methyltransferase CAB38_18665 PF00892 EamA-like transporter family CAB38_18675 PF00749 tRNA synthetases class I (E and Q), catalytic domain CAB38_18675 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CAB38_18690 PF00072 Response regulator receiver domain CAB38_18690 PF00990 Diguanylate cyclase, GGDEF domain CAB38_18695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_18695 PF00512 His Kinase A (phospho-acceptor) domain CAB38_18695 PF17149 Periplasmic sensor domain found in signal transduction proteins CAB38_18695 PF00072 Response regulator receiver domain CAB38_18695 PF01627 Hpt domain CAB38_18695 PF00672 HAMP domain CAB38_18710 PF01625 Peptide methionine sulfoxide reductase CAB38_18720 PF00923 Transaldolase/Fructose-6-phosphate aldolase CAB38_18725 PF01272 Transcription elongation factor, GreA/GreB, C-term CAB38_18725 PF14760 Rnk N-terminus CAB38_18735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB38_18735 PF03466 LysR substrate binding domain CAB38_18740 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAB38_18740 PF13192 Thioredoxin domain CAB38_18745 PF10417 C-terminal domain of 1-Cys peroxiredoxin CAB38_18745 PF00578 AhpC/TSA family CAB38_18750 PF17827 PrmC N-terminal domain CAB38_18750 PF05175 Methyltransferase small domain CAB38_18755 PF00561 alpha/beta hydrolase fold CAB38_18765 PF00293 NUDIX domain CAB38_18770 PF00476 DNA polymerase family A CAB38_18770 PF01367 5'-3' exonuclease, C-terminal SAM fold CAB38_18770 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CAB38_18770 PF01612 3'-5' exonuclease CAB38_18800 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CAB38_18800 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CAB38_18800 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CAB38_18820 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CAB38_18825 PF02233 NAD(P) transhydrogenase beta subunit CAB38_18840 PF01063 Amino-transferase class IV CAB38_18850 PF00082 Subtilase family CAB38_18850 PF04151 Bacterial pre-peptidase C-terminal domain CAB38_18860 PF00082 Subtilase family CAB38_18860 PF04151 Bacterial pre-peptidase C-terminal domain CAB38_18865 PF04073 Aminoacyl-tRNA editing domain CAB38_18875 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain CAB38_18875 PF17189 Glycosyl hydrolase family 30 beta sandwich domain CAB38_18885 PF03358 NADPH-dependent FMN reductase CAB38_18890 PF03631 Virulence factor BrkB CAB38_18895 PF08534 Redoxin CAB38_18900 PF00708 Acylphosphatase CAB38_18910 PF03976 Polyphosphate kinase 2 (PPK2) CAB38_18930 PF00472 RF-1 domain CAB38_18930 PF03462 PCRF domain CAB38_18935 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CAB38_18935 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CAB38_18935 PF01488 Shikimate / quinate 5-dehydrogenase CAB38_18945 PF03550 Outer membrane lipoprotein LolB CAB38_18950 PF00288 GHMP kinases N terminal domain CAB38_18950 PF08544 GHMP kinases C terminal CAB38_18960 PF14572 Phosphoribosyl synthetase-associated domain CAB38_18960 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CAB38_18965 PF14693 Ribosomal protein TL5, C-terminal domain CAB38_18965 PF01386 Ribosomal L25p family CAB38_18970 PF01195 Peptidyl-tRNA hydrolase CAB38_18975 PF06071 Protein of unknown function (DUF933) CAB38_18975 PF01926 50S ribosome-binding GTPase CAB38_18995 PF03143 Elongation factor Tu C-terminal domain CAB38_18995 PF03144 Elongation factor Tu domain 2 CAB38_18995 PF00009 Elongation factor Tu GTP binding domain CAB38_19005 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CAB38_19010 PF00467 KOW motif CAB38_19010 PF02357 Transcription termination factor nusG CAB38_19015 PF00298 Ribosomal protein L11, RNA binding domain CAB38_19015 PF03946 Ribosomal protein L11, N-terminal domain CAB38_19020 PF00687 Ribosomal protein L1p/L10e family CAB38_19025 PF00466 Ribosomal protein L10 CAB38_19030 PF16320 Ribosomal protein L7/L12 dimerisation domain CAB38_19030 PF00542 Ribosomal protein L7/L12 C-terminal domain CAB38_19035 PF04561 RNA polymerase Rpb2, domain 2 CAB38_19035 PF04560 RNA polymerase Rpb2, domain 7 CAB38_19035 PF04563 RNA polymerase beta subunit CAB38_19035 PF10385 RNA polymerase beta subunit external 1 domain CAB38_19035 PF04565 RNA polymerase Rpb2, domain 3 CAB38_19035 PF00562 RNA polymerase Rpb2, domain 6 CAB38_19040 PF05000 RNA polymerase Rpb1, domain 4 CAB38_19040 PF04983 RNA polymerase Rpb1, domain 3 CAB38_19040 PF00623 RNA polymerase Rpb1, domain 2 CAB38_19040 PF04998 RNA polymerase Rpb1, domain 5 CAB38_19040 PF04997 RNA polymerase Rpb1, domain 1 CAB38_19045 PF00164 Ribosomal protein S12/S23 CAB38_19050 PF00177 Ribosomal protein S7p/S5e CAB38_19055 PF14492 Elongation Factor G, domain II CAB38_19055 PF03764 Elongation factor G, domain IV CAB38_19055 PF03144 Elongation factor Tu domain 2 CAB38_19055 PF00009 Elongation factor Tu GTP binding domain CAB38_19055 PF00679 Elongation factor G C-terminus CAB38_19060 PF00009 Elongation factor Tu GTP binding domain CAB38_19060 PF03144 Elongation factor Tu domain 2 CAB38_19060 PF03143 Elongation factor Tu C-terminal domain CAB38_19065 PF00338 Ribosomal protein S10p/S20e CAB38_19070 PF00297 Ribosomal protein L3 CAB38_19075 PF00573 Ribosomal protein L4/L1 family CAB38_19080 PF00276 Ribosomal protein L23 CAB38_19085 PF00181 Ribosomal Proteins L2, RNA binding domain CAB38_19085 PF03947 Ribosomal Proteins L2, C-terminal domain CAB38_19090 PF00203 Ribosomal protein S19 CAB38_19095 PF00237 Ribosomal protein L22p/L17e CAB38_19100 PF07650 KH domain CAB38_19100 PF00189 Ribosomal protein S3, C-terminal domain CAB38_19105 PF00252 Ribosomal protein L16p/L10e CAB38_19110 PF00831 Ribosomal L29 protein CAB38_19115 PF00366 Ribosomal protein S17 CAB38_19120 PF00238 Ribosomal protein L14p/L23e CAB38_19125 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CAB38_19125 PF00467 KOW motif CAB38_19130 PF00673 ribosomal L5P family C-terminus CAB38_19130 PF00281 Ribosomal protein L5 CAB38_19135 PF00253 Ribosomal protein S14p/S29e CAB38_19140 PF00410 Ribosomal protein S8 CAB38_19145 PF00347 Ribosomal protein L6 CAB38_19150 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CAB38_19155 PF00333 Ribosomal protein S5, N-terminal domain CAB38_19155 PF03719 Ribosomal protein S5, C-terminal domain CAB38_19160 PF00327 Ribosomal protein L30p/L7e CAB38_19165 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CAB38_19170 PF00344 SecY translocase CAB38_19175 PF00416 Ribosomal protein S13/S18 CAB38_19180 PF00411 Ribosomal protein S11 CAB38_19185 PF01479 S4 domain CAB38_19185 PF00163 Ribosomal protein S4/S9 N-terminal domain CAB38_19190 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CAB38_19190 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CAB38_19190 PF01000 RNA polymerase Rpb3/RpoA insert domain CAB38_19195 PF01196 Ribosomal protein L17 CAB38_19200 PF02600 Disulfide bond formation protein DsbB CAB38_19220 PF01474 Class-II DAHP synthetase family CAB38_19230 PF01425 Amidase CAB38_19245 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CAB38_19250 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CAB38_19250 PF00056 lactate/malate dehydrogenase, NAD binding domain CAB38_19255 PF00043 Glutathione S-transferase, C-terminal domain CAB38_19255 PF02798 Glutathione S-transferase, N-terminal domain CAB38_19275 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CAB38_19275 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAB38_19280 PF00107 Zinc-binding dehydrogenase CAB38_19280 PF08240 Alcohol dehydrogenase GroES-like domain CAB38_19290 PF05736 OprF membrane domain CAB38_19290 PF00691 OmpA family CAB38_19300 PF00849 RNA pseudouridylate synthase CAB38_19310 PF00155 Aminotransferase class I and II CAB38_19320 PF00528 Binding-protein-dependent transport system inner membrane component CAB38_19325 PF00528 Binding-protein-dependent transport system inner membrane component CAB38_19330 PF00005 ABC transporter CAB38_19330 PF17850 CysA C-terminal regulatory domain CAB38_19330 PF12857 TOBE-like domain CAB38_19340 PF08240 Alcohol dehydrogenase GroES-like domain CAB38_19340 PF00107 Zinc-binding dehydrogenase CAB38_19370 PF10459 Peptidase S46 CAB38_19375 PF00300 Histidine phosphatase superfamily (branch 1) CAB38_19385 PF02875 Mur ligase family, glutamate ligase domain CAB38_19385 PF08245 Mur ligase middle domain CAB38_19400 PF00156 Phosphoribosyl transferase domain CAB38_19405 PF04305 Protein of unknown function (DUF455) CAB38_19425 PF00149 Calcineurin-like phosphoesterase CAB38_19430 PF01569 PAP2 superfamily CAB38_19435 PF13439 Glycosyltransferase Family 4 CAB38_19435 PF00534 Glycosyl transferases group 1 CAB38_19440 PF02541 Ppx/GppA phosphatase family CAB38_19445 PF17941 Polyphosphate kinase C-terminal domain 1 CAB38_19445 PF13090 Polyphosphate kinase C-terminal domain 2 CAB38_19445 PF13089 Polyphosphate kinase N-terminal domain CAB38_19445 PF02503 Polyphosphate kinase middle domain CAB38_19450 PF00512 His Kinase A (phospho-acceptor) domain CAB38_19450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_19450 PF11808 Phosphate regulon sensor protein PhoR CAB38_19450 PF00989 PAS fold CAB38_19455 PF00072 Response regulator receiver domain CAB38_19455 PF00486 Transcriptional regulatory protein, C terminal CAB38_19460 PF01435 Peptidase family M48 CAB38_19460 PF13181 Tetratricopeptide repeat CAB38_19465 PF00462 Glutaredoxin CAB38_19475 PF00180 Isocitrate/isopropylmalate dehydrogenase CAB38_19505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_19505 PF00512 His Kinase A (phospho-acceptor) domain CAB38_19505 PF00989 PAS fold CAB38_19515 PF05697 Bacterial trigger factor protein (TF) CAB38_19515 PF05698 Bacterial trigger factor protein (TF) C-terminus CAB38_19520 PF00574 Clp protease CAB38_19525 PF07724 AAA domain (Cdc48 subfamily) CAB38_19525 PF10431 C-terminal, D2-small domain, of ClpB protein CAB38_19525 PF06689 ClpX C4-type zinc finger CAB38_19530 PF05362 Lon protease (S16) C-terminal proteolytic domain CAB38_19530 PF00004 ATPase family associated with various cellular activities (AAA) CAB38_19530 PF02190 ATP-dependent protease La (LON) substrate-binding domain CAB38_19535 PF00216 Bacterial DNA-binding protein CAB38_19555 PF01476 LysM domain CAB38_19555 PF05257 CHAP domain CAB38_19560 PF00753 Metallo-beta-lactamase superfamily CAB38_19560 PF16123 Hydroxyacylglutathione hydrolase C-terminus CAB38_19570 PF00075 RNase H CAB38_19575 PF00929 Exonuclease CAB38_19595 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CAB38_19605 PF12706 Beta-lactamase superfamily domain CAB38_19605 PF00753 Metallo-beta-lactamase superfamily CAB38_19610 PF04055 Radical SAM superfamily CAB38_19610 PF06463 Molybdenum Cofactor Synthesis C CAB38_19615 PF01967 MoaC family CAB38_19620 PF02597 ThiS family CAB38_19625 PF02391 MoaE protein CAB38_19640 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CAB38_19640 PF12170 DNA polymerase III tau subunit V interacting with alpha CAB38_19640 PF12169 DNA polymerase III subunits gamma and tau domain III CAB38_19645 PF02575 YbaB/EbfC DNA-binding family CAB38_19650 PF13662 Toprim domain CAB38_19650 PF02132 RecR protein CAB38_19655 PF01230 HIT domain CAB38_19665 PF01841 Transglutaminase-like superfamily CAB38_19665 PF11992 Domain of unknown function (DUF3488) CAB38_19665 PF13559 Domain of unknown function (DUF4129) CAB38_19675 PF07726 ATPase family associated with various cellular activities (AAA) CAB38_19675 PF17863 AAA lid domain CAB38_19735 PF02794 RTX toxin acyltransferase family CAB38_19765 PF00535 Glycosyl transferase family 2 CAB38_19770 PF14883 Hypothetical glycosyl hydrolase family 13 CAB38_19770 PF01522 Polysaccharide deacetylase CAB38_19780 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CAB38_19780 PF17287 POTRA domain CAB38_19780 PF08479 POTRA domain, ShlB-type CAB38_19830 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain CAB38_19830 PF13332 Hemagglutinin repeat CAB38_19830 PF05860 haemagglutination activity domain CAB38_19830 PF13018 Extended Signal Peptide of Type V secretion system CAB38_19830 PF05594 Haemagluttinin repeat CAB38_19840 PF03447 Homoserine dehydrogenase, NAD binding domain CAB38_19840 PF13840 ACT domain CAB38_19840 PF00696 Amino acid kinase family CAB38_19840 PF01842 ACT domain CAB38_19840 PF00742 Homoserine dehydrogenase CAB38_19845 PF00288 GHMP kinases N terminal domain CAB38_19845 PF08544 GHMP kinases C terminal CAB38_19855 PF00291 Pyridoxal-phosphate dependent enzyme CAB38_19855 PF14821 Threonine synthase N terminus CAB38_19865 PF13545 Crp-like helix-turn-helix domain CAB38_19865 PF00027 Cyclic nucleotide-binding domain CAB38_19870 PF13393 Histidyl-tRNA synthetase CAB38_19870 PF03129 Anticodon binding domain CAB38_19880 PF08029 HisG, C-terminal domain CAB38_19880 PF01634 ATP phosphoribosyltransferase CAB38_19885 PF00815 Histidinol dehydrogenase CAB38_19890 PF00155 Aminotransferase class I and II CAB38_19895 PF00475 Imidazoleglycerol-phosphate dehydratase CAB38_19900 PF00117 Glutamine amidotransferase class-I CAB38_19905 PF00977 Histidine biosynthesis protein CAB38_19910 PF00977 Histidine biosynthesis protein CAB38_19915 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CAB38_19915 PF01502 Phosphoribosyl-AMP cyclohydrolase CAB38_19935 PF03079 ARD/ARD' family CAB38_19940 PF00596 Class II Aldolase and Adducin N-terminal domain CAB38_19945 PF13520 Amino acid permease CAB38_19950 PF13520 Amino acid permease CAB38_19960 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CAB38_19960 PF01842 ACT domain CAB38_19960 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CAB38_19965 PF01565 FAD binding domain CAB38_19965 PF02913 FAD linked oxidases, C-terminal domain CAB38_19985 PF08207 Elongation factor P (EF-P) KOW-like domain CAB38_19985 PF01132 Elongation factor P (EF-P) OB domain CAB38_19985 PF09285 Elongation factor P, C-terminal CAB38_19990 PF00106 short chain dehydrogenase CAB38_19995 PF00682 HMGL-like CAB38_20005 PF00378 Enoyl-CoA hydratase/isomerase CAB38_20015 PF07664 Ferrous iron transport protein B C terminus CAB38_20015 PF07670 Nucleoside recognition CAB38_20015 PF02421 Ferrous iron transport protein B CAB38_20035 PF03473 MOSC domain CAB38_20035 PF03475 3-alpha domain CAB38_20040 PF01113 Dihydrodipicolinate reductase, N-terminus CAB38_20040 PF05173 Dihydrodipicolinate reductase, C-terminus CAB38_20045 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CAB38_20045 PF00117 Glutamine amidotransferase class-I CAB38_20055 PF02142 MGS-like domain CAB38_20055 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CAB38_20055 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CAB38_20060 PF03449 Transcription elongation factor, N-terminal CAB38_20060 PF01272 Transcription elongation factor, GreA/GreB, C-term CAB38_20070 PF01368 DHH family CAB38_20070 PF02272 DHHA1 domain CAB38_20070 PF17768 RecJ OB domain CAB38_20120 PF04397 LytTr DNA-binding domain CAB38_20120 PF00072 Response regulator receiver domain CAB38_20130 PF00152 tRNA synthetases class II (D, K and N) CAB38_20130 PF01336 OB-fold nucleic acid binding domain CAB38_20135 PF00072 Response regulator receiver domain CAB38_20140 PF00512 His Kinase A (phospho-acceptor) domain CAB38_20140 PF00072 Response regulator receiver domain CAB38_20140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_20140 PF01627 Hpt domain CAB38_20145 PF00378 Enoyl-CoA hydratase/isomerase CAB38_20180 PF00501 AMP-binding enzyme CAB38_20180 PF13193 AMP-binding enzyme C-terminal domain CAB38_20190 PF00694 Aconitase C-terminal domain CAB38_20190 PF00330 Aconitase family (aconitate hydratase) CAB38_20205 PF11791 Aconitate B N-terminal domain CAB38_20205 PF00330 Aconitase family (aconitate hydratase) CAB38_20205 PF06434 Aconitate hydratase 2 N-terminus CAB38_20210 PF00561 alpha/beta hydrolase fold CAB38_20215 PF00990 Diguanylate cyclase, GGDEF domain CAB38_20215 PF03707 Bacterial signalling protein N terminal repeat CAB38_20215 PF00563 EAL domain CAB38_20220 PF00072 Response regulator receiver domain CAB38_20220 PF01339 CheB methylesterase CAB38_20225 PF03975 CheD chemotactic sensory transduction CAB38_20230 PF03705 CheR methyltransferase, all-alpha domain CAB38_20230 PF01739 CheR methyltransferase, SAM binding domain CAB38_20235 PF02203 Tar ligand binding domain homologue CAB38_20235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAB38_20235 PF00672 HAMP domain CAB38_20245 PF01584 CheW-like domain CAB38_20250 PF07317 Flagellar regulator YcgR CAB38_20250 PF07238 PilZ domain CAB38_20260 PF00672 HAMP domain CAB38_20260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAB38_20260 PF02203 Tar ligand binding domain homologue CAB38_20265 PF02203 Tar ligand binding domain homologue CAB38_20265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAB38_20265 PF00672 HAMP domain CAB38_20270 PF00672 HAMP domain CAB38_20270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAB38_20270 PF02203 Tar ligand binding domain homologue CAB38_20275 PF02203 Tar ligand binding domain homologue CAB38_20275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAB38_20275 PF00672 HAMP domain CAB38_20280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAB38_20280 PF02203 Tar ligand binding domain homologue CAB38_20280 PF00672 HAMP domain CAB38_20290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAB38_20290 PF02203 Tar ligand binding domain homologue CAB38_20290 PF00672 HAMP domain CAB38_20295 PF00672 HAMP domain CAB38_20295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAB38_20295 PF02203 Tar ligand binding domain homologue CAB38_20305 PF05598 Transposase domain (DUF772) CAB38_20315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAB38_20315 PF02203 Tar ligand binding domain homologue CAB38_20315 PF00672 HAMP domain CAB38_20320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAB38_20320 PF00672 HAMP domain CAB38_20320 PF02203 Tar ligand binding domain homologue CAB38_20335 PF00672 HAMP domain CAB38_20335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAB38_20335 PF02203 Tar ligand binding domain homologue CAB38_20340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAB38_20340 PF08269 Cache domain CAB38_20340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAB38_20340 PF08269 Cache domain CAB38_20350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAB38_20350 PF00672 HAMP domain CAB38_20350 PF02203 Tar ligand binding domain homologue CAB38_20355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_20355 PF01627 Hpt domain CAB38_20355 PF09078 CheY binding CAB38_20355 PF02895 Signal transducing histidine kinase, homodimeric domain CAB38_20355 PF01584 CheW-like domain CAB38_20360 PF00072 Response regulator receiver domain CAB38_20370 PF01584 CheW-like domain CAB38_20375 PF13614 AAA domain CAB38_20380 PF13677 Membrane MotB of proton-channel complex MotA/MotB CAB38_20380 PF00691 OmpA family CAB38_20385 PF01618 MotA/TolQ/ExbB proton channel family CAB38_20425 PF04055 Radical SAM superfamily CAB38_20425 PF13186 Iron-sulfur cluster-binding domain CAB38_20440 PF01584 CheW-like domain CAB38_20440 PF02895 Signal transducing histidine kinase, homodimeric domain CAB38_20440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_20440 PF01627 Hpt domain CAB38_20440 PF00072 Response regulator receiver domain CAB38_20445 PF04344 Chemotaxis phosphatase, CheZ CAB38_20450 PF00072 Response regulator receiver domain CAB38_20455 PF04539 Sigma-70 region 3 CAB38_20455 PF04542 Sigma-70 region 2 CAB38_20455 PF04545 Sigma-70, region 4 CAB38_20460 PF10609 NUBPL iron-transfer P-loop NTPase CAB38_20470 PF00771 FHIPEP family CAB38_20475 PF01312 FlhB HrpN YscU SpaS Family CAB38_20495 PF00563 EAL domain CAB38_20495 PF03707 Bacterial signalling protein N terminal repeat CAB38_20495 PF13188 PAS domain CAB38_20495 PF00990 Diguanylate cyclase, GGDEF domain CAB38_20500 PF01311 Bacterial export proteins, family 1 CAB38_20505 PF01313 Bacterial export proteins, family 3 CAB38_20515 PF00813 FliP family CAB38_20520 PF04347 Flagellar biosynthesis protein, FliO CAB38_20525 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CAB38_20530 PF02154 Flagellar motor switch protein FliM CAB38_20530 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CAB38_20550 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CAB38_20550 PF18269 T3SS EscN ATPase C-terminal domain CAB38_20560 PF01706 FliG C-terminal domain CAB38_20560 PF14841 FliG middle domain CAB38_20560 PF14842 FliG N-terminal domain CAB38_20565 PF08345 Flagellar M-ring protein C-terminal CAB38_20565 PF01514 Secretory protein of YscJ/FliF family CAB38_20570 PF02049 Flagellar hook-basal body complex protein FliE CAB38_20575 PF00534 Glycosyl transferases group 1 CAB38_20575 PF00535 Glycosyl transferase family 2 CAB38_20625 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CAB38_20625 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CAB38_20650 PF02954 Bacterial regulatory protein, Fis family CAB38_20650 PF00158 Sigma-54 interaction domain CAB38_20650 PF06490 Flagellar regulatory protein FleQ CAB38_20655 PF00072 Response regulator receiver domain CAB38_20655 PF01339 CheB methylesterase CAB38_20660 PF04963 Sigma-54 factor, core binding domain CAB38_20660 PF04552 Sigma-54, DNA binding domain CAB38_20660 PF00309 Sigma-54 factor, Activator interacting domain (AID) CAB38_20665 PF00196 Bacterial regulatory proteins, luxR family CAB38_20665 PF00072 Response regulator receiver domain CAB38_20680 PF02561 Flagellar protein FliS CAB38_20685 PF02465 Flagellar hook-associated protein 2 N-terminus CAB38_20685 PF07196 Flagellin hook IN motif CAB38_20685 PF07195 Flagellar hook-associated protein 2 C-terminus CAB38_20690 PF00669 Bacterial flagellin N-terminal helical region CAB38_20690 PF00700 Bacterial flagellin C-terminal helical region CAB38_20695 PF00669 Bacterial flagellin N-terminal helical region CAB38_20695 PF00700 Bacterial flagellin C-terminal helical region CAB38_20700 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CAB38_20700 PF07196 Flagellin hook IN motif CAB38_20705 PF10135 Rod binding protein CAB38_20705 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CAB38_20710 PF02119 Flagellar P-ring protein CAB38_20715 PF02107 Flagellar L-ring protein CAB38_20720 PF00460 Flagella basal body rod protein CAB38_20720 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CAB38_20730 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CAB38_20730 PF00460 Flagella basal body rod protein CAB38_20735 PF07559 Flagellar basal body protein FlaE CAB38_20735 PF00460 Flagella basal body rod protein CAB38_20735 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CAB38_20740 PF03963 Flagellar hook capping protein - N-terminal region CAB38_20745 PF00460 Flagella basal body rod protein CAB38_20745 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CAB38_20755 PF01584 CheW-like domain CAB38_20755 PF00072 Response regulator receiver domain CAB38_20775 PF13426 PAS domain CAB38_20775 PF13188 PAS domain CAB38_20775 PF00989 PAS fold CAB38_20775 PF00512 His Kinase A (phospho-acceptor) domain CAB38_20775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_20780 PF00990 Diguanylate cyclase, GGDEF domain CAB38_20780 PF03707 Bacterial signalling protein N terminal repeat CAB38_20780 PF00563 EAL domain CAB38_20785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_20785 PF07730 Histidine kinase CAB38_20790 PF00563 EAL domain CAB38_20790 PF00990 Diguanylate cyclase, GGDEF domain CAB38_20790 PF03707 Bacterial signalling protein N terminal repeat CAB38_20800 PF00672 HAMP domain CAB38_20800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAB38_20800 PF12729 Four helix bundle sensory module for signal transduction CAB38_20805 PF04356 Protein of unknown function (DUF489) CAB38_20815 PF00293 NUDIX domain CAB38_20820 PF02617 ATP-dependent Clp protease adaptor protein ClpS CAB38_20825 PF10431 C-terminal, D2-small domain, of ClpB protein CAB38_20825 PF02861 Clp amino terminal domain, pathogenicity island component CAB38_20825 PF17871 AAA lid domain CAB38_20825 PF07724 AAA domain (Cdc48 subfamily) CAB38_20825 PF00004 ATPase family associated with various cellular activities (AAA) CAB38_20830 PF01176 Translation initiation factor 1A / IF-1 CAB38_20835 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CAB38_20845 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAB38_20850 PF09397 Ftsk gamma domain CAB38_20850 PF17854 FtsK alpha domain CAB38_20850 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CAB38_20850 PF01580 FtsK/SpoIIIE family CAB38_20860 PF03548 Outer membrane lipoprotein carrier protein LolA CAB38_20870 PF12002 MgsA AAA+ ATPase C terminal CAB38_20870 PF16193 AAA C-terminal domain CAB38_20870 PF00004 ATPase family associated with various cellular activities (AAA) CAB38_20875 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CAB38_20885 PF02803 Thiolase, C-terminal domain CAB38_20885 PF00108 Thiolase, N-terminal domain CAB38_20890 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CAB38_20890 PF00378 Enoyl-CoA hydratase/isomerase CAB38_20890 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CAB38_20900 PF00334 Nucleoside diphosphate kinase CAB38_20905 PF04055 Radical SAM superfamily CAB38_20915 PF13464 Domain of unknown function (DUF4115) CAB38_20925 PF01011 PQQ enzyme repeat CAB38_20925 PF13360 PQQ-like domain CAB38_20930 PF01926 50S ribosome-binding GTPase CAB38_20930 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CAB38_20935 PF00994 Probable molybdopterin binding domain CAB38_20935 PF03454 MoeA C-terminal region (domain IV) CAB38_20935 PF03453 MoeA N-terminal region (domain I and II) CAB38_20945 PF00899 ThiF family CAB38_20975 PF08240 Alcohol dehydrogenase GroES-like domain CAB38_20975 PF13823 Alcohol dehydrogenase GroES-associated CAB38_20975 PF00107 Zinc-binding dehydrogenase CAB38_20985 PF03372 Endonuclease/Exonuclease/phosphatase family CAB38_20995 PF03454 MoeA C-terminal region (domain IV) CAB38_20995 PF00994 Probable molybdopterin binding domain CAB38_20995 PF03453 MoeA N-terminal region (domain I and II) CAB38_21000 PF12804 MobA-like NTP transferase domain CAB38_21010 PF10414 Sirohaem synthase dimerisation region CAB38_21010 PF14824 Sirohaem biosynthesis protein central CAB38_21010 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CAB38_21050 PF05974 Domain of unknown function (DUF892) CAB38_21085 PF00072 Response regulator receiver domain CAB38_21085 PF00196 Bacterial regulatory proteins, luxR family CAB38_21090 PF13426 PAS domain CAB38_21090 PF00512 His Kinase A (phospho-acceptor) domain CAB38_21090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_21090 PF08448 PAS fold CAB38_21090 PF00072 Response regulator receiver domain CAB38_21100 PF00873 AcrB/AcrD/AcrF family CAB38_21105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CAB38_21105 PF00529 HlyD membrane-fusion protein of T1SS CAB38_21115 PF00082 Subtilase family CAB38_21115 PF03797 Autotransporter beta-domain CAB38_21135 PF07690 Major Facilitator Superfamily CAB38_21140 PF00072 Response regulator receiver domain CAB38_21145 PF00072 Response regulator receiver domain CAB38_21145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_21145 PF00672 HAMP domain CAB38_21145 PF01627 Hpt domain CAB38_21145 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CAB38_21145 PF00512 His Kinase A (phospho-acceptor) domain CAB38_21150 PF04286 Protein of unknown function (DUF445) CAB38_21160 PF00202 Aminotransferase class-III CAB38_21175 PF07690 Major Facilitator Superfamily CAB38_21180 PF02634 FdhD/NarQ family CAB38_21185 PF00384 Molybdopterin oxidoreductase CAB38_21195 PF07690 Major Facilitator Superfamily CAB38_21195 PF00083 Sugar (and other) transporter CAB38_21200 PF01814 Hemerythrin HHE cation binding domain CAB38_21205 PF00072 Response regulator receiver domain CAB38_21205 PF00990 Diguanylate cyclase, GGDEF domain CAB38_21210 PF01266 FAD dependent oxidoreductase CAB38_21215 PF00120 Glutamine synthetase, catalytic domain CAB38_21220 PF07722 Peptidase C26 CAB38_21225 PF00120 Glutamine synthetase, catalytic domain CAB38_21230 PF00202 Aminotransferase class-III CAB38_21235 PF13416 Bacterial extracellular solute-binding protein CAB38_21240 PF13533 Biotin-lipoyl like CAB38_21245 PF07690 Major Facilitator Superfamily CAB38_21250 PF02321 Outer membrane efflux protein CAB38_21255 PF00005 ABC transporter CAB38_21255 PF08402 TOBE domain CAB38_21260 PF00528 Binding-protein-dependent transport system inner membrane component CAB38_21265 PF00528 Binding-protein-dependent transport system inner membrane component CAB38_21270 PF00171 Aldehyde dehydrogenase family CAB38_21285 PF00571 CBS domain CAB38_21285 PF03471 Transporter associated domain CAB38_21295 PF02130 Uncharacterized protein family UPF0054 CAB38_21305 PF02562 PhoH-like protein CAB38_21310 PF00919 Uncharacterized protein family UPF0004 CAB38_21310 PF01938 TRAM domain CAB38_21310 PF04055 Radical SAM superfamily CAB38_21325 PF01464 Transglycosylase SLT domain CAB38_21335 PF00355 Rieske [2Fe-2S] domain CAB38_21335 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CAB38_21340 PF00032 Cytochrome b(C-terminal)/b6/petD CAB38_21340 PF00033 Cytochrome b/b6/petB CAB38_21345 PF02167 Cytochrome C1 family CAB38_21350 PF02798 Glutathione S-transferase, N-terminal domain CAB38_21350 PF00043 Glutathione S-transferase, C-terminal domain CAB38_21355 PF04386 Stringent starvation protein B CAB38_21375 PF08494 DEAD/H associated CAB38_21375 PF00270 DEAD/DEAH box helicase CAB38_21375 PF00271 Helicase conserved C-terminal domain CAB38_21380 PF02245 Methylpurine-DNA glycosylase (MPG) CAB38_21385 PF02743 Cache domain CAB38_21385 PF00672 HAMP domain CAB38_21385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAB38_21390 PF01584 CheW-like domain CAB38_21420 PF01612 3'-5' exonuclease CAB38_21420 PF00570 HRDC domain CAB38_21430 PF03781 Sulfatase-modifying factor enzyme 1 CAB38_21445 PF02601 Exonuclease VII, large subunit CAB38_21445 PF13742 OB-fold nucleic acid binding domain CAB38_21450 PF08331 Domain of unknown function (DUF1730) CAB38_21455 PF01256 Carbohydrate kinase CAB38_21455 PF03853 YjeF-related protein N-terminus CAB38_21460 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CAB38_21465 PF01520 N-acetylmuramoyl-L-alanine amidase CAB38_21465 PF11741 AMIN domain CAB38_21470 PF08676 MutL C terminal dimerisation domain CAB38_21470 PF01119 DNA mismatch repair protein, C-terminal domain CAB38_21490 PF05233 PHB accumulation regulatory domain CAB38_21490 PF07879 PHB/PHA accumulation regulator DNA-binding domain CAB38_21495 PF00106 short chain dehydrogenase CAB38_21500 PF00749 tRNA synthetases class I (E and Q), catalytic domain CAB38_21510 PF00072 Response regulator receiver domain CAB38_21510 PF00990 Diguanylate cyclase, GGDEF domain CAB38_21510 PF00563 EAL domain CAB38_21590 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CAB38_21610 PF05552 Conserved TM helix CAB38_21610 PF00924 Mechanosensitive ion channel CAB38_21615 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CAB38_21615 PF00391 PEP-utilising enzyme, mobile domain CAB38_21615 PF02896 PEP-utilising enzyme, TIM barrel domain CAB38_21620 PF03618 Kinase/pyrophosphorylase CAB38_21640 PF01066 CDP-alcohol phosphatidyltransferase CAB38_21650 PF00561 alpha/beta hydrolase fold CAB38_21665 PF00355 Rieske [2Fe-2S] domain CAB38_21665 PF01266 FAD dependent oxidoreductase CAB38_21675 PF17674 HHH domain CAB38_21675 PF00575 S1 RNA binding domain CAB38_21675 PF09371 Tex-like protein N-terminal domain CAB38_21675 PF16921 Tex protein YqgF-like domain CAB38_21680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB38_21680 PF00072 Response regulator receiver domain CAB38_21680 PF00512 His Kinase A (phospho-acceptor) domain CAB38_21680 PF09308 LuxQ, periplasmic CAB38_21725 PF00034 Cytochrome c CAB38_21735 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CAB38_21740 PF00873 AcrB/AcrD/AcrF family CAB38_21745 PF00873 AcrB/AcrD/AcrF family CAB38_21755 PF01081 KDPG and KHG aldolase CAB38_21760 PF00920 Dehydratase family CAB38_21765 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CAB38_21770 PF02685 Glucokinase CAB38_21775 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CAB38_21775 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CAB38_21780 PF17912 MalK OB fold domain CAB38_21780 PF00005 ABC transporter CAB38_21795 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CAB38_21800 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CAB38_21805 PF00890 FAD binding domain CAB38_21805 PF02910 Fumarate reductase flavoprotein C-term CAB38_21815 PF13237 4Fe-4S dicluster domain CAB38_21815 PF13085 2Fe-2S iron-sulfur cluster binding domain CAB38_21820 PF03937 Flavinator of succinate dehydrogenase CAB38_21830 PF02687 FtsX-like permease family CAB38_21830 PF12704 MacB-like periplasmic core domain CAB38_21835 PF00005 ABC transporter CAB38_21845 PF03772 Competence protein CAB38_21845 PF00753 Metallo-beta-lactamase superfamily CAB38_21850 PF01618 MotA/TolQ/ExbB proton channel family CAB38_21860 PF00005 ABC transporter CAB38_21860 PF00664 ABC transporter transmembrane region CAB38_21865 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CAB38_21870 PF02348 Cytidylyltransferase CAB38_21875 PF01451 Low molecular weight phosphotyrosine protein phosphatase CAB38_21885 PF02151 UvrB/uvrC motif CAB38_21885 PF01541 GIY-YIG catalytic domain CAB38_21885 PF08459 UvrC Helix-hairpin-helix N-terminal CAB38_21890 PF01066 CDP-alcohol phosphatidyltransferase CAB38_21955 PF00975 Thioesterase domain CAB38_21955 PF00550 Phosphopantetheine attachment site CAB38_21955 PF00668 Condensation domain CAB38_21955 PF13193 AMP-binding enzyme C-terminal domain CAB38_21955 PF00501 AMP-binding enzyme CAB38_21970 PF01648 4'-phosphopantetheinyl transferase superfamily CAB38_21970 PF17837 4'-phosphopantetheinyl transferase N-terminal domain CAB38_21980 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CAB38_21980 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CAB38_21980 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CAB38_21990 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CAB38_22005 PF00072 Response regulator receiver domain CAB38_22005 PF00196 Bacterial regulatory proteins, luxR family CAB38_22010 PF00575 S1 RNA binding domain CAB38_22010 PF10150 Ribonuclease E/G family CAB38_22010 PF12111 Polyribonucleotide phosphorylase C terminal CAB38_22015 PF01479 S4 domain CAB38_22015 PF00849 RNA pseudouridylate synthase CAB38_22020 PF11737 Protein of unknown function (DUF3300) CAB38_22025 PF02535 ZIP Zinc transporter CAB38_22035 PF01329 Pterin 4 alpha carbinolamine dehydratase CAB38_22040 PF01106 NifU-like domain CAB38_22050 PF13700 Domain of unknown function (DUF4158) CAB38_22050 PF01526 Tn3 transposase DDE domain CAB38_22085 PF03527 RHS protein CAB38_22085 PF05593 RHS Repeat CAB38_22090 PF05593 RHS Repeat CAB38_22090 PF03527 RHS protein CAB38_22115 PF13276 HTH-like domain CAB38_22115 PF13683 Integrase core domain CAB38_22135 PF02837 Glycosyl hydrolases family 2, sugar binding domain CAB38_22135 PF00703 Glycosyl hydrolases family 2 CAB38_22135 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 CAB38_22135 PF16355 Domain of unknown function (DUF4982) CAB38_22135 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CAB38_22140 PF07745 Glycosyl hydrolase family 53 CAB38_22150 PF01381 Helix-turn-helix CAB38_22150 PF06114 IrrE N-terminal-like domain CAB38_22150 PF09856 Predicted transcriptional regulator (DUF2083) CAB38_22155 PF00171 Aldehyde dehydrogenase family CAB38_22160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CAB38_22160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CAB38_22160 PF02770 Acyl-CoA dehydrogenase, middle domain CAB38_22165 PF00378 Enoyl-CoA hydratase/isomerase CAB38_22170 PF00378 Enoyl-CoA hydratase/isomerase CAB38_22170 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CAB38_22170 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CAB38_22180 PF01545 Cation efflux family CAB38_22190 PF00378 Enoyl-CoA hydratase/isomerase CAB38_22190 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CAB38_22190 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CAB38_22195 PF08281 Sigma-70, region 4 CAB38_22195 PF04542 Sigma-70 region 2 CAB38_22205 PF13180 PDZ domain CAB38_22210 PF06421 GTP-binding protein LepA C-terminus CAB38_22210 PF03144 Elongation factor Tu domain 2 CAB38_22210 PF00679 Elongation factor G C-terminus CAB38_22210 PF00009 Elongation factor Tu GTP binding domain CAB38_22215 PF10502 Signal peptidase, peptidase S26 CAB38_22225 PF00035 Double-stranded RNA binding motif CAB38_22225 PF14622 Ribonuclease-III-like CAB38_22230 PF01926 50S ribosome-binding GTPase CAB38_22230 PF07650 KH domain CAB38_22245 PF05958 tRNA (Uracil-5-)-methyltransferase CAB38_22255 PF01928 CYTH domain CAB38_22260 PF01323 DSBA-like thioredoxin domain CAB38_22265 PF01593 Flavin containing amine oxidoreductase CAB38_22270 PF04244 Deoxyribodipyrimidine photo-lyase-related protein CAB38_22275 PF00933 Glycosyl hydrolase family 3 N terminal domain CAB38_22285 PF01048 Phosphorylase superfamily CAB38_22295 PF00313 'Cold-shock' DNA-binding domain CAB38_22300 PF01494 FAD binding domain CAB38_22310 PF08494 DEAD/H associated CAB38_22310 PF00271 Helicase conserved C-terminal domain CAB38_22310 PF00270 DEAD/DEAH box helicase CAB38_22315 PF04679 ATP dependent DNA ligase C terminal region CAB38_22315 PF01068 ATP dependent DNA ligase domain CAB38_22315 PF04675 DNA ligase N terminus CAB38_22325 PF04675 DNA ligase N terminus CAB38_22325 PF01068 ATP dependent DNA ligase domain CAB38_22325 PF04679 ATP dependent DNA ligase C terminal region CAB38_22355 PF02803 Thiolase, C-terminal domain CAB38_22355 PF00108 Thiolase, N-terminal domain CAB38_22365 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CAB38_22365 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CAB38_22380 PF01863 Protein of unknown function DUF45 CAB38_22385 PF07043 Protein of unknown function (DUF1328) CAB38_22395 PF01258 Prokaryotic dksA/traR C4-type zinc finger CAB38_22415 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CAB38_22425 PF08274 PhnA Zinc-Ribbon CAB38_22425 PF03831 PhnA domain CAB38_22440 PF07690 Major Facilitator Superfamily CAB38_22470 PF09924 Uncharacterised conserved protein (DUF2156) CAB38_22470 PF03706 Lysylphosphatidylglycerol synthase TM region CAB38_22480 PF01042 Endoribonuclease L-PSP CAB38_22525 PF04545 Sigma-70, region 4 CAB38_22525 PF04542 Sigma-70 region 2 CAB38_22545 PF04060 Putative Fe-S cluster CAB38_22555 PF01588 Putative tRNA binding domain CAB38_22555 PF09334 tRNA synthetases class I (M) CAB38_22570 PF13732 Domain of unknown function (DUF4162) CAB38_22570 PF00005 ABC transporter CAB38_22575 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CAB38_22580 PF00324 Amino acid permease CAB38_22585 PF02574 Homocysteine S-methyltransferase CAB38_22595 PF02592 Putative vitamin uptake transporter CAB38_22615 PF03551 Transcriptional regulator PadR-like family CAB38_22650 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CAB38_22655 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CAB38_22655 PF07733 Bacterial DNA polymerase III alpha NTPase domain CAB38_22655 PF14579 Helix-hairpin-helix motif CAB38_22655 PF02811 PHP domain CAB38_22655 PF01336 OB-fold nucleic acid binding domain CAB38_22660 PF01351 Ribonuclease HII CAB38_22665 PF02684 Lipid-A-disaccharide synthetase CAB38_22670 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CAB38_22670 PF00132 Bacterial transferase hexapeptide (six repeats) CAB38_22675 PF07977 FabA-like domain CAB38_22680 PF00132 Bacterial transferase hexapeptide (six repeats) CAB38_22680 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CAB38_22690 PF01103 Surface antigen CAB38_22690 PF07244 Surface antigen variable number repeat CAB38_22695 PF02163 Peptidase family M50 CAB38_22695 PF17820 PDZ domain CAB38_22700 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CAB38_22700 PF13288 DXP reductoisomerase C-terminal domain CAB38_22700 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CAB38_22710 PF01255 Putative undecaprenyl diphosphate synthase CAB38_22715 PF01765 Ribosome recycling factor CAB38_22720 PF00696 Amino acid kinase family CAB38_22725 PF00072 Response regulator receiver domain CAB38_22725 PF00990 Diguanylate cyclase, GGDEF domain CAB38_22730 PF00889 Elongation factor TS CAB38_22735 PF00318 Ribosomal protein S2 CAB38_22770 PF00557 Metallopeptidase family M24 CAB38_22775 PF01966 HD domain CAB38_22775 PF01909 Nucleotidyltransferase domain CAB38_22775 PF08335 GlnD PII-uridylyltransferase CAB38_22780 PF00132 Bacterial transferase hexapeptide (six repeats) CAB38_22780 PF14602 Hexapeptide repeat of succinyl-transferase CAB38_22780 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CAB38_22785 PF03960 ArsC family CAB38_22790 PF07687 Peptidase dimerisation domain CAB38_22790 PF01546 Peptidase family M20/M25/M40 CAB38_22795 PF13537 Glutamine amidotransferase domain CAB38_22795 PF00733 Asparagine synthase CAB38_22805 PF00593 TonB dependent receptor CAB38_22805 PF07715 TonB-dependent Receptor Plug Domain CAB38_22810 PF01804 Penicillin amidase CAB38_22815 PF00210 Ferritin-like domain CAB38_22830 PF03989 DNA gyrase C-terminal domain, beta-propeller CAB38_22830 PF00521 DNA gyrase/topoisomerase IV, subunit A CAB38_22845 PF02321 Outer membrane efflux protein CAB38_22850 PF00529 HlyD membrane-fusion protein of T1SS CAB38_22850 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CAB38_22855 PF07690 Major Facilitator Superfamily CAB38_22865 PF01915 Glycosyl hydrolase family 3 C-terminal domain CAB38_22865 PF00933 Glycosyl hydrolase family 3 N terminal domain CAB38_22865 PF14310 Fibronectin type III-like domain CAB38_22905 PF12802 MarR family CAB38_22910 PF01432 Peptidase family M3 CAB38_22920 PF00255 Glutathione peroxidase CAB38_22925 PF00175 Oxidoreductase NAD-binding domain CAB38_22925 PF00970 Oxidoreductase FAD-binding domain CAB38_22930 PF00005 ABC transporter CAB38_22935 PF05681 Fumarate hydratase (Fumerase) CAB38_22935 PF05683 Fumarase C-terminus CAB38_22950 PF00484 Carbonic anhydrase CAB38_22955 PF02253 Phospholipase A1 CAB38_22965 PF00313 'Cold-shock' DNA-binding domain CAB38_22980 PF00899 ThiF family CAB38_22985 PF01026 TatD related DNase CAB38_23000 PF02770 Acyl-CoA dehydrogenase, middle domain CAB38_23000 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CAB38_23000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CAB38_23010 PF02798 Glutathione S-transferase, N-terminal domain CAB38_23010 PF00043 Glutathione S-transferase, C-terminal domain CAB38_23020 PF00733 Asparagine synthase CAB38_23020 PF13537 Glutamine amidotransferase domain CAB38_23025 PF03358 NADPH-dependent FMN reductase CAB38_23030 PF00772 DnaB-like helicase N terminal domain CAB38_23030 PF03796 DnaB-like helicase C terminal domain CAB38_23035 PF00875 DNA photolyase CAB38_23035 PF03441 FAD binding domain of DNA photolyase CAB38_23045 PF00691 OmpA family CAB38_23045 PF05736 OprF membrane domain CAB38_23055 PF03466 LysR substrate binding domain CAB38_23055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB38_23070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CAB38_23075 PF00873 AcrB/AcrD/AcrF family CAB38_23080 PF00106 short chain dehydrogenase CAB38_23085 PF02321 Outer membrane efflux protein CAB38_23095 PF08448 PAS fold CAB38_23095 PF00990 Diguanylate cyclase, GGDEF domain CAB38_23105 PF00990 Diguanylate cyclase, GGDEF domain CAB38_23135 PF01668 SmpB protein CAB38_23140 PF03364 Polyketide cyclase / dehydrase and lipid transport CAB38_23145 PF03658 RnfH family Ubiquitin CAB38_23150 PF04355 SmpA / OmlA family CAB38_23155 PF01475 Ferric uptake regulator family CAB38_23160 PF02463 RecF/RecN/SMC N terminal domain CAB38_23165 PF01628 HrcA protein C terminal domain CAB38_23165 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding CAB38_23170 PF01025 GrpE CAB38_23175 PF00012 Hsp70 protein CAB38_23180 PF00226 DnaJ domain CAB38_23180 PF01556 DnaJ C terminal domain CAB38_23180 PF00684 DnaJ central domain CAB38_23190 PF08543 Phosphomethylpyrimidine kinase