locus-tag	class	description
CAB38_00030	COG0583	DNA-binding transcription factor activity
CAB38_00035	COG1132	(ABC) transporter
CAB38_00070	COG2850	peptidyl-arginine hydroxylation
CAB38_00090	COG1253	flavin adenine dinucleotide binding
CAB38_00120	COG1131	(ABC) transporter
CAB38_00125	COG1725	Transcriptional regulator
CAB38_00135	COG0386	Belongs to the glutathione peroxidase family
CAB38_00150	COG2900	Belongs to the SlyX family
CAB38_00175	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CAB38_00190	COG1410	methionine synthase
CAB38_00190	COG0646	methionine synthase
CAB38_00195	COG0646	methionine synthase
CAB38_00195	COG1410	methionine synthase
CAB38_00200	COG2226	methyltransferase
CAB38_00205	COG1960	acyl-CoA dehydrogenase activity
CAB38_00210	COG1960	acyl-CoA dehydrogenase activity
CAB38_00230	COG0557	exoribonuclease II activity
CAB38_00240	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CAB38_00245	COG3706	GGDEF domain
CAB38_00250	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CAB38_00260	COG0704	Plays a role in the regulation of phosphate uptake
CAB38_00265	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
CAB38_00270	COG0581	inorganic phosphate transmembrane transporter activity
CAB38_00275	COG0573	inorganic phosphate transmembrane transporter activity
CAB38_00280	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CAB38_00305	COG0659	secondary active sulfate transmembrane transporter activity
CAB38_00310	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CAB38_00320	COG1024	Enoyl-CoA hydratase
CAB38_00330	COG0494	nUDIX hydrolase
CAB38_00375	COG0116	Belongs to the methyltransferase superfamily
CAB38_00375	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
CAB38_00380	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
CAB38_00405	COG2925	Exonuclease
CAB38_00415	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CAB38_00420	COG3844	kynureninase activity
CAB38_00430	COG0662	Cupin 2, conserved barrel domain protein
CAB38_00435	COG0288	reversible hydration of carbon dioxide
CAB38_00500	COG2808	Putative FMN-binding domain
CAB38_00520	COG0017	Asparaginyl-tRNA synthetase
CAB38_00530	COG0316	Belongs to the HesB IscA family
CAB38_00535	COG0360	Binds together with S18 to 16S ribosomal RNA
CAB38_00540	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CAB38_00545	COG0359	binds to the 23S rRNA
CAB38_00555	COG3115	cell septum assembly
CAB38_00565	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CAB38_00570	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
CAB38_00575	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
CAB38_00590	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
CAB38_00600	COG4993	Dehydrogenase
CAB38_00610	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
CAB38_00620	COG2986	histidine ammonia-lyase
CAB38_00625	COG1228	amidohydrolase
CAB38_00665	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
CAB38_00670	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CAB38_00675	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
CAB38_00680	COG1605	Chorismate mutase
CAB38_00680	COG0077	Prephenate dehydratase
CAB38_00685	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
CAB38_00700	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
CAB38_00705	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
CAB38_00710	COG0583	DNA-binding transcription factor activity
CAB38_00735	COG0840	transmembrane signaling receptor activity
CAB38_00770	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
CAB38_00775	COG0784	Response regulator, receiver
CAB38_00775	COG4191	Histidine kinase
CAB38_00790	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CAB38_00800	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
CAB38_00810	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CAB38_00825	COG1595	DNA-templated transcription, initiation
CAB38_00880	COG2244	polysaccharide biosynthetic process
CAB38_00915	COG2264	protein methyltransferase activity
CAB38_00940	COG1136	(ABC) transporter
CAB38_00945	COG1132	(ABC) transporter
CAB38_00950	COG0477	Major facilitator Superfamily
CAB38_00955	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CAB38_00970	COG1253	flavin adenine dinucleotide binding
CAB38_00985	COG0306	phosphate transporter
CAB38_01010	COG0504	CTP synthase activity
CAB38_01015	COG2877	3-deoxy-8-phosphooctulonate synthase activity
CAB38_01025	COG0148	phosphopyruvate hydratase activity
CAB38_01030	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
CAB38_01035	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
CAB38_01040	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
CAB38_01045	COG0585	pseudouridine synthase activity
CAB38_01050	COG2840	Smr protein MutS2
CAB38_01055	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
CAB38_01060	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CAB38_01065	COG1238	metal cluster binding
CAB38_01080	COG1534	Rna-binding protein
CAB38_01085	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
CAB38_01095	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
CAB38_01100	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
CAB38_01110	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CAB38_01115	COG1546	Belongs to the CinA family
CAB38_01125	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CAB38_01130	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
CAB38_01140	COG2137	regulation of response to DNA damage stimulus
CAB38_01145	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CAB38_01150	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
CAB38_01170	COG1741	Belongs to the pirin family
CAB38_01175	COG0583	DNA-binding transcription factor activity
CAB38_01200	COG0351	phosphomethylpyrimidine kinase
CAB38_01215	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
CAB38_01220	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
CAB38_01235	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CAB38_01245	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
CAB38_01250	COG3734	2-keto-3-deoxy-galactonokinase
CAB38_01260	COG4948	Mandelate Racemase Muconate Lactonizing
CAB38_01265	COG0800	Aldolase
CAB38_01305	COG1501	Belongs to the glycosyl hydrolase 31 family
CAB38_01315	COG1070	Carbohydrate kinase
CAB38_01320	COG2115	Belongs to the xylose isomerase family
CAB38_01325	COG0477	Major facilitator Superfamily
CAB38_01345	COG0860	N-Acetylmuramoyl-L-alanine amidase
CAB38_01350	COG1469	GTP cyclohydrolase I activity
CAB38_01370	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
CAB38_01375	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
CAB38_01380	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
CAB38_01385	COG0166	Belongs to the GPI family
CAB38_01410	COG1472	Belongs to the glycosyl hydrolase 3 family
CAB38_01425	COG5001	Diguanylate cyclase
CAB38_01425	COG4251	negative regulation of phosphorylation
CAB38_01425	COG2203	Gaf domain
CAB38_01425	COG3706	GGDEF domain
CAB38_01435	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
CAB38_01440	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
CAB38_01455	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
CAB38_01460	COG0671	phosphoesterase, PA-phosphatase related
CAB38_01490	COG0812	UDP-N-acetylmuramate dehydrogenase activity
CAB38_01495	COG0167	dihydroorotate dehydrogenase activity
CAB38_01515	COG1012	belongs to the aldehyde dehydrogenase family
CAB38_01555	COG0326	Molecular chaperone. Has ATPase activity
CAB38_01560	COG0742	ribosomal rna small subunit methyltransferase
CAB38_01565	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
CAB38_01580	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
CAB38_01585	COG0405	Gamma-glutamyltransferase
CAB38_01590	COG3291	Pkd domain containing protein
CAB38_01595	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
CAB38_01635	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
CAB38_01640	COG0343	queuine tRNA-ribosyltransferase activity
CAB38_01645	COG1862	Preprotein translocase
CAB38_01655	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CAB38_01700	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CAB38_01700	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CAB38_01705	COG1105	Belongs to the carbohydrate kinase PfkB family
CAB38_01710	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
CAB38_01710	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CAB38_01715	COG1609	Transcriptional regulator
CAB38_01725	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CAB38_01730	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CAB38_01740	COG2902	Dehydrogenase
CAB38_01775	COG1238	metal cluster binding
CAB38_01825	COG1073	alpha beta
CAB38_01825	COG2226	methyltransferase
CAB38_01915	COG3590	peptidase
CAB38_01925	COG3590	peptidase
CAB38_01950	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CAB38_01955	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CAB38_01960	COG2311	Membrane
CAB38_01965	COG1047	Peptidyl-prolyl cis-trans
CAB38_01970	COG0791	NLP P60 protein
CAB38_01975	COG0791	NLP P60 protein
CAB38_01985	COG4106	trans-aconitate 2-methyltransferase activity
CAB38_01990	COG1301	dicarboxylic acid transport
CAB38_01995	COG1785	Belongs to the alkaline phosphatase family
CAB38_02005	COG0037	tRNA processing
CAB38_02010	COG1722	exodeoxyribonuclease VII activity
CAB38_02015	COG0142	geranyltranstransferase activity
CAB38_02045	COG3318	Belongs to the UPF0149 family
CAB38_02045	COG3012	SEC-C Motif Domain Protein
CAB38_02060	COG0312	modulator of DNA gyrase
CAB38_02065	COG3028	Belongs to the UPF0307 family
CAB38_02070	COG0312	modulator of DNA gyrase
CAB38_02080	COG3164	Protein of unknown function
CAB38_02085	COG1530	ribonuclease E activity
CAB38_02090	COG0424	maF-like protein
CAB38_02095	COG2968	Membrane
CAB38_02115	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
CAB38_02130	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
CAB38_02145	COG0495	leucyl-tRNA aminoacylation
CAB38_02155	COG3118	belongs to the thioredoxin family
CAB38_02195	COG2155	Conserved Protein
CAB38_02240	COG1132	(ABC) transporter
CAB38_02270	COG1538	Outer membrane efflux protein
CAB38_02275	COG0745	RESPONSE REGULATOR receiver
CAB38_02280	COG5000	phosphorelay sensor kinase activity
CAB38_02280	COG5002	protein histidine kinase activity
CAB38_02285	COG0475	glutathione-regulated potassium exporter activity
CAB38_02295	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
CAB38_02320	COG1187	pseudouridine synthase activity
CAB38_02325	COG5001	Diguanylate cyclase
CAB38_02325	COG5002	protein histidine kinase activity
CAB38_02460	COG2814	Major facilitator Superfamily
CAB38_02465	COG0583	DNA-binding transcription factor activity
CAB38_02475	COG2207	Transcriptional regulator
CAB38_02495	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CAB38_02510	COG0735	belongs to the Fur family
CAB38_02515	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CAB38_02540	COG4452	Inner membrane protein CreD
CAB38_02550	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
CAB38_02555	COG2205	protein histidine kinase activity
CAB38_02560	COG0745	RESPONSE REGULATOR receiver
CAB38_02565	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
CAB38_02575	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CAB38_02585	COG0643	Histidine kinase
CAB38_02585	COG2198	Histidine kinase
CAB38_02590	COG0840	transmembrane signaling receptor activity
CAB38_02595	COG0835	chemotaxis
CAB38_02600	COG2199	diguanylate cyclase activity
CAB38_02600	COG2200	EAL domain
CAB38_02600	COG2202	Pas domain
CAB38_02605	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CAB38_02610	COG2201	protein-glutamate methylesterase activity
CAB38_02615	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CAB38_02640	COG0588	phosphoglycerate mutase activity
CAB38_02645	COG1515	deoxyribonuclease V activity
CAB38_02655	COG1741	Belongs to the pirin family
CAB38_02670	COG1741	Belongs to the pirin family
CAB38_02685	COG2879	small protein
CAB38_02735	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
CAB38_02740	COG1529	Aldehyde oxidase and xanthine dehydrogenase
CAB38_02745	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
CAB38_02750	COG2080	2 iron, 2 sulfur cluster binding
CAB38_02755	COG3321	synthase
CAB38_02755	COG0604	alcohol dehydrogenase
CAB38_02755	COG1028	Short-chain dehydrogenase reductase Sdr
CAB38_02760	COG4251	negative regulation of phosphorylation
CAB38_02760	COG5001	Diguanylate cyclase
CAB38_02760	COG2203	Gaf domain
CAB38_02760	COG3706	GGDEF domain
CAB38_02765	COG0629	single-stranded DNA binding
CAB38_02770	COG0142	geranyltranstransferase activity
CAB38_02785	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
CAB38_02800	COG0527	aspartate kinase activity
CAB38_02805	COG0384	phenazine biosynthesis protein PhzF
CAB38_02810	COG0384	phenazine biosynthesis protein PhzF
CAB38_02820	COG1764	response to oxidative stress
CAB38_02825	COG0540	Belongs to the ATCase OTCase family
CAB38_02830	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
CAB38_02835	COG1678	Uncharacterized ACR, COG1678
CAB38_02845	COG0519	Catalyzes the synthesis of GMP from XMP
CAB38_02855	COG5297	Belongs to the glycosyl hydrolase family 6
CAB38_02870	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
CAB38_02885	COG0739	heme binding
CAB38_02905	COG0693	protein deglycase activity
CAB38_02915	COG1959	2 iron, 2 sulfur cluster binding
CAB38_02920	COG0719	Fe-S assembly protein
CAB38_02925	COG0396	ATPase activity
CAB38_02930	COG0719	Fe-S assembly protein
CAB38_02935	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CAB38_02945	COG2146	nitrite reductase [NAD(P)H] activity
CAB38_02950	COG4774	siderophore transport
CAB38_02955	COG3128	pkhd-type hydroxylase
CAB38_02980	COG1477	protein flavinylation
CAB38_02985	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
CAB38_03000	COG1555	photosystem II stabilization
CAB38_03015	COG3178	'Phosphotransferase
CAB38_03020	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
CAB38_03030	COG0628	permease
CAB38_03040	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
CAB38_03050	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CAB38_03070	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CAB38_03075	COG0271	Belongs to the BolA IbaG family
CAB38_03085	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
CAB38_03095	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
CAB38_03100	COG1137	ATPase activity
CAB38_03115	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CAB38_03120	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
CAB38_03125	COG1660	Displays ATPase and GTPase activities
CAB38_03135	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CAB38_03140	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CAB38_03150	COG2239	Acts as a magnesium transporter
CAB38_03165	COG1294	oxidase, subunit
CAB38_03170	COG1271	oxidase subunit
CAB38_03190	COG1113	amino acid transport
CAB38_03220	COG2197	response regulator
CAB38_03225	COG0531	amino acid
CAB38_03255	COG1234	tRNA 3'-trailer cleavage
CAB38_03280	COG2814	Major facilitator Superfamily
CAB38_03290	COG0754	glutathionylspermidine amidase activity
CAB38_03315	COG1842	Phage shock protein A
CAB38_03325	COG0259	pyridoxamine-phosphate oxidase activity
CAB38_03330	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
CAB38_03335	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
CAB38_03345	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
CAB38_03350	COG0477	Major facilitator Superfamily
CAB38_03370	COG0784	Response regulator, receiver
CAB38_03370	COG2198	Histidine kinase
CAB38_03370	COG2205	protein histidine kinase activity
CAB38_03375	COG2353	YceI-like domain
CAB38_03395	COG1760	l-serine dehydratase
CAB38_03410	COG0460	homoserine dehydrogenase
CAB38_03410	COG0527	aspartate kinase activity
CAB38_03415	COG0626	cystathionine gamma-synthase activity
CAB38_03420	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CAB38_03425	COG0739	heme binding
CAB38_03430	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
CAB38_03435	COG1272	protein, Hemolysin III
CAB38_03440	COG2982	Protein involved in outer membrane biogenesis
CAB38_03445	COG0516	GMP reductase activity
CAB38_03445	COG0517	IMP dehydrogenase activity
CAB38_03450	COG0463	Glycosyl transferase, family 2
CAB38_03455	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CAB38_03460	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
CAB38_03470	COG4771	TonB-dependent receptor
CAB38_03485	COG1309	transcriptional regulator
CAB38_03495	COG1960	acyl-CoA dehydrogenase activity
CAB38_03520	COG0509	glycine decarboxylation via glycine cleavage system
CAB38_03525	COG0404	The glycine cleavage system catalyzes the degradation of glycine
CAB38_03545	COG1742	UPF0060 membrane protein
CAB38_03550	COG3956	TIGRFAM MazG family protein
CAB38_03560	COG0494	nUDIX hydrolase
CAB38_03570	COG1385	rRNA (uridine-N3-)-methyltransferase activity
CAB38_03575	COG0837	glucose binding
CAB38_03590	COG1388	LysM domain
CAB38_03590	COG3858	chitin binding
CAB38_03605	COG1472	Belongs to the glycosyl hydrolase 3 family
CAB38_03640	COG3537	Alpha-1,2-mannosidase
CAB38_03680	COG3142	Participates in the control of copper homeostasis
CAB38_03685	COG1446	asparaginase
CAB38_03715	COG0643	Histidine kinase
CAB38_03715	COG2198	Histidine kinase
CAB38_03715	COG0784	Response regulator, receiver
CAB38_03720	COG0840	transmembrane signaling receptor activity
CAB38_03725	COG0835	chemotaxis
CAB38_03740	COG0189	ligase activity
CAB38_03750	COG1397	ADP-ribosylglycohydrolase
CAB38_03760	COG1199	ATP-dependent helicase activity
CAB38_03770	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CAB38_03775	COG1215	transferase activity, transferring glycosyl groups
CAB38_03790	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CAB38_03800	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
CAB38_03805	COG5424	Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ
CAB38_03810	COG0535	radical SAM domain protein
CAB38_03815	COG0535	radical SAM domain protein
CAB38_03840	COG1643	Atp-dependent helicase
CAB38_03845	COG0783	Belongs to the Dps family
CAB38_03855	COG0514	ATP-dependent DNA helicase (RecQ)
CAB38_03890	COG0840	transmembrane signaling receptor activity
CAB38_03910	COG3920	Histidine kinase
CAB38_03915	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
CAB38_03925	COG0602	queuosine metabolic process
CAB38_03935	COG2885	chlorophyll binding
CAB38_03940	COG0823	Involved in the tonB-independent uptake of proteins
CAB38_03950	COG0848	biopolymer transport protein
CAB38_03960	COG0824	Thioesterase
CAB38_03965	COG2255	four-way junction helicase activity
CAB38_03975	COG3158	transport of potassium into the cell
CAB38_03980	COG0632	four-way junction helicase activity
CAB38_03985	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
CAB38_03990	COG0217	transcriptional regulatory protein
CAB38_04005	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
CAB38_04020	COG0477	Major facilitator Superfamily
CAB38_04065	COG0488	(ABC) transporter
CAB38_04105	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CAB38_04105	COG4651	solute:proton antiporter activity
CAB38_04130	COG4772	TonB-dependent receptor
CAB38_04140	COG4264	IucA IucC family
CAB38_04155	COG0019	diaminopimelate decarboxylase activity
CAB38_04185	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
CAB38_04195	COG1492	cobalamin metabolic process
CAB38_04225	COG4206	TonB-dependent receptor
CAB38_04230	COG0542	response to heat
CAB38_04235	COG1116	anion transmembrane transporter activity
CAB38_04240	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CAB38_04245	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CAB38_04255	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CAB38_04260	COG4771	TonB-dependent receptor
CAB38_04270	COG2827	Endonuclease containing a URI domain
CAB38_04315	COG1877	trehalose-phosphatase activity
CAB38_04320	COG3387	PFAM Glycoside hydrolase 15-related
CAB38_04340	COG0840	transmembrane signaling receptor activity
CAB38_04345	COG3011	Protein conserved in bacteria
CAB38_04360	COG0564	pseudouridine synthase activity
CAB38_04365	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CAB38_04375	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
CAB38_04375	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CAB38_04385	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CAB38_04390	COG0045	succinate-CoA ligase (ADP-forming) activity
CAB38_04435	COG1459	type II secretion system
CAB38_04440	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
CAB38_04445	COG0237	dephospho-CoA kinase activity
CAB38_04485	COG5002	protein histidine kinase activity
CAB38_04490	COG0745	RESPONSE REGULATOR receiver
CAB38_04500	COG0189	ligase activity
CAB38_04545	COG2022	thiamine diphosphate biosynthetic process
CAB38_04555	COG0220	tRNA (guanine-N7-)-methyltransferase activity
CAB38_04560	COG0471	metal ion transport
CAB38_04560	COG3273	potassium ion transport
CAB38_04585	COG1970	mechanosensitive ion channel activity
CAB38_04595	COG1609	Transcriptional regulator
CAB38_04605	COG3250	beta-galactosidase activity
CAB38_04610	COG4948	Mandelate Racemase Muconate Lactonizing
CAB38_04625	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CAB38_04675	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CAB38_04680	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CAB38_04685	COG0529	Catalyzes the synthesis of activated sulfate
CAB38_04685	COG2895	sulfate adenylyltransferase (ATP) activity
CAB38_04690	COG0175	sulfate reduction
CAB38_04700	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CAB38_04705	COG0175	sulfate reduction
CAB38_04725	COG2205	protein histidine kinase activity
CAB38_04725	COG2198	Histidine kinase
CAB38_04725	COG0784	Response regulator, receiver
CAB38_04745	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
CAB38_04745	COG1648	precorrin-2 dehydrogenase activity
CAB38_04760	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
CAB38_04765	COG3588	fructose-bisphosphate aldolase
CAB38_04770	COG0469	pyruvate kinase activity
CAB38_04780	COG0126	phosphoglycerate kinase activity
CAB38_04805	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CAB38_04900	COG3077	Addiction module antitoxin, RelB DinJ family
CAB38_04905	COG3041	Addiction module toxin RelE StbE family
CAB38_04930	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
CAB38_04935	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
CAB38_04945	COG0165	Argininosuccinate lyase
CAB38_04950	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
CAB38_04960	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
CAB38_04965	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CAB38_04975	COG0137	argininosuccinate synthase activity
CAB38_04980	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CAB38_04990	COG0215	cysteine-tRNA ligase activity
CAB38_04995	COG2166	iron-sulfur cluster assembly
CAB38_05010	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
CAB38_05015	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
CAB38_05045	COG4302	ethanolamine ammonia-lyase activity
CAB38_05115	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CAB38_05120	COG0402	S-adenosylhomocysteine deaminase activity
CAB38_05130	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CAB38_05135	COG1509	lysine 2,3-aminomutase activity
CAB38_05140	COG5001	Diguanylate cyclase
CAB38_05140	COG3300	MHYT domain
CAB38_05155	COG0483	inositol monophosphate 1-phosphatase activity
CAB38_05160	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CAB38_05185	COG0513	Belongs to the DEAD box helicase family
CAB38_05190	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CAB38_05195	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
CAB38_05205	COG0625	glutathione transferase activity
CAB38_05215	COG4681	YaeQ
CAB38_05275	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
CAB38_05290	COG1914	H( )-stimulated, divalent metal cation uptake system
CAB38_05310	COG2814	Major facilitator Superfamily
CAB38_05335	COG1335	isochorismatase
CAB38_05350	COG2197	response regulator
CAB38_05370	COG0583	DNA-binding transcription factor activity
CAB38_05375	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CAB38_05380	COG3002	Belongs to the UPF0753 family
CAB38_05385	COG0518	GMP synthase (glutamine-hydrolyzing) activity
CAB38_05385	COG0519	Catalyzes the synthesis of GMP from XMP
CAB38_05395	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
CAB38_05405	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CAB38_05405	COG0475	glutathione-regulated potassium exporter activity
CAB38_05415	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CAB38_05425	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CAB38_05430	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
CAB38_05440	COG0776	regulation of translation
CAB38_05445	COG0539	negative regulation of cytoplasmic translation
CAB38_05450	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
CAB38_05470	COG2957	Belongs to the agmatine deiminase family
CAB38_05475	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CAB38_05500	COG0395	ABC-type sugar transport system, permease component
CAB38_05505	COG1175	transmembrane transport
CAB38_05535	COG2350	Protein conserved in bacteria
CAB38_05540	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
CAB38_05545	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
CAB38_05550	COG1187	pseudouridine synthase activity
CAB38_05570	COG0436	Aminotransferase
CAB38_05575	COG4133	protoheme IX ABC transporter activity
CAB38_05595	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
CAB38_05600	COG1138	Cytochrome C-type biogenesis protein
CAB38_05620	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CAB38_05625	COG1278	Cold shock
CAB38_05630	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
CAB38_05635	COG4988	ABC transporter
CAB38_05655	COG3344	reverse transcriptase
CAB38_05670	COG0732	type I restriction modification DNA specificity domain
CAB38_05700	COG1309	transcriptional regulator
CAB38_05705	COG1028	Short-chain dehydrogenase reductase Sdr
CAB38_05715	COG0308	aminopeptidase N
CAB38_05720	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
CAB38_05730	COG0330	HflC and HflK could
CAB38_05735	COG0330	HflC and HflK could
CAB38_05755	COG0678	peroxiredoxin activity
CAB38_05765	COG4953	penicillin-binding protein 1C
CAB38_05785	COG2373	Large extracellular alpha-helical protein
CAB38_05820	COG3609	addiction module antidote protein, CC2985 family
CAB38_05840	COG3829	transcription factor binding
CAB38_05865	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CAB38_05870	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CAB38_05885	COG1028	Short-chain dehydrogenase reductase Sdr
CAB38_05900	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CAB38_05905	COG0333	Belongs to the bacterial ribosomal protein bL32 family
CAB38_05910	COG1399	metal-binding, possibly nucleic acid-binding protein
CAB38_05915	COG0424	maF-like protein
CAB38_06000	COG0531	amino acid
CAB38_06020	COG0006	proline dipeptidase activity
CAB38_06030	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CAB38_06045	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CAB38_06050	COG3938	Belongs to the proline racemase family
CAB38_06060	COG0552	protein localization to endoplasmic reticulum
CAB38_06070	COG1194	a g-specific adenine glycosylase
CAB38_06075	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
CAB38_06080	COG0784	Response regulator, receiver
CAB38_06080	COG4191	Histidine kinase
CAB38_06125	COG3040	lipid binding
CAB38_06140	COG1960	acyl-CoA dehydrogenase activity
CAB38_06150	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
CAB38_06170	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CAB38_06175	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CAB38_06180	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CAB38_06205	COG0438	transferase activity, transferring glycosyl groups
CAB38_06215	COG0438	transferase activity, transferring glycosyl groups
CAB38_06220	COG0438	transferase activity, transferring glycosyl groups
CAB38_06270	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CAB38_06270	COG0072	phenylalanine-tRNA ligase activity
CAB38_06275	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
CAB38_06290	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
CAB38_06295	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CAB38_06365	COG2948	multi-organism process
CAB38_06385	COG3505	Type IV secretory pathway VirD4
CAB38_06400	COG0556	nucleotide-excision repair
CAB38_06460	COG1611	Belongs to the LOG family
CAB38_06475	COG2095	MarC family integral membrane protein
CAB38_06485	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
CAB38_06520	COG1185	polyribonucleotide nucleotidyltransferase activity
CAB38_06525	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
CAB38_06530	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
CAB38_06535	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
CAB38_06540	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
CAB38_06545	COG0195	Participates in both transcription termination and antitermination
CAB38_06550	COG0779	Required for maturation of 30S ribosomal subunits
CAB38_06560	COG1007	ATP synthesis coupled electron transport
CAB38_06580	COG0839	Belongs to the complex I subunit 6 family
CAB38_06585	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CAB38_06590	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
CAB38_06600	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
CAB38_06605	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
CAB38_06610	COG0649	NAD binding
CAB38_06615	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CAB38_06620	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CAB38_06625	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CAB38_06640	COG0149	triose-phosphate isomerase activity
CAB38_06645	COG0300	oxidoreductase activity
CAB38_06675	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CAB38_06680	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
CAB38_06685	COG0159	tryptophan synthase activity
CAB38_06695	COG0133	tryptophan synthase activity
CAB38_06705	COG0135	phosphoribosylanthranilate isomerase activity
CAB38_06710	COG0101	tRNA pseudouridine synthase activity
CAB38_06730	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CAB38_06735	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CAB38_06740	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
CAB38_06745	COG2890	protein-(glutamine-N5) methyltransferase activity
CAB38_06755	COG0688	phosphatidylethanolamine metabolic process
CAB38_06770	COG0433	COG0433 Predicted ATPase
CAB38_06775	COG0494	nUDIX hydrolase
CAB38_06795	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CAB38_06800	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CAB38_06815	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CAB38_06845	COG4695	Portal protein
CAB38_06890	COG3179	chitinase
CAB38_07085	COG0717	Belongs to the dCTP deaminase family
CAB38_07095	COG0489	protein tyrosine kinase activity
CAB38_07130	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
CAB38_07140	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
CAB38_07160	COG0534	Mate efflux family protein
CAB38_07165	COG0335	large ribosomal subunit rRNA binding
CAB38_07170	COG0336	Belongs to the RNA methyltransferase TrmD family
CAB38_07175	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
CAB38_07180	COG0228	four-way junction DNA binding
CAB38_07185	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CAB38_07195	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CAB38_07200	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CAB38_07240	COG4999	Histidine kinase
CAB38_07240	COG3850	Histidine kinase
CAB38_07240	COG3437	response regulator, receiver
CAB38_07240	COG2205	protein histidine kinase activity
CAB38_07245	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CAB38_07255	COG2205	protein histidine kinase activity
CAB38_07260	COG5507	3-demethylubiquinone-9 3-methyltransferase
CAB38_07270	COG4771	TonB-dependent receptor
CAB38_07295	COG2172	sigma factor antagonist activity
CAB38_07300	COG1366	Belongs to the anti-sigma-factor antagonist family
CAB38_07305	COG1366	Belongs to the anti-sigma-factor antagonist family
CAB38_07315	COG0326	Molecular chaperone. Has ATPase activity
CAB38_07320	COG2207	Transcriptional regulator
CAB38_07330	COG3152	Membrane
CAB38_07345	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
CAB38_07350	COG1845	cytochrome c oxidase, subunit III
CAB38_07355	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CAB38_07370	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
CAB38_07375	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
CAB38_07380	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
CAB38_07385	COG0196	riboflavin kinase activity
CAB38_07395	COG0268	Binds directly to 16S ribosomal RNA
CAB38_07400	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
CAB38_07405	COG0211	Belongs to the bacterial ribosomal protein bL27 family
CAB38_07410	COG0261	This protein binds to 23S rRNA in the presence of protein L20
CAB38_07415	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CAB38_07420	COG0824	Thioesterase
CAB38_07470	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
CAB38_07480	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
CAB38_07510	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
CAB38_07525	COG2197	response regulator
CAB38_07530	COG4585	Histidine kinase
CAB38_07545	COG0850	regulation of cytokinetic process
CAB38_07550	COG2894	cell division
CAB38_07555	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
CAB38_07565	COG0642	Histidine kinase
CAB38_07570	COG0745	RESPONSE REGULATOR receiver
CAB38_07585	COG2194	sulfuric ester hydrolase activity
CAB38_07600	COG2814	Major facilitator Superfamily
CAB38_07605	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
CAB38_07605	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
CAB38_07615	COG0656	L-ascorbic acid biosynthetic process
CAB38_07620	COG0753	catalase activity
CAB38_07645	COG1917	Cupin 2, conserved barrel domain protein
CAB38_07645	COG2207	Transcriptional regulator
CAB38_07685	COG1297	OPT oligopeptide transporter protein
CAB38_07705	COG0587	DNA-directed DNA polymerase activity
CAB38_07720	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CAB38_07755	COG2080	2 iron, 2 sulfur cluster binding
CAB38_07760	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
CAB38_07765	COG1529	Aldehyde oxidase and xanthine dehydrogenase
CAB38_07820	COG0492	ferredoxin-NADP+ reductase activity
CAB38_07830	COG1028	Short-chain dehydrogenase reductase Sdr
CAB38_07835	COG3537	Alpha-1,2-mannosidase
CAB38_07845	COG1028	Short-chain dehydrogenase reductase Sdr
CAB38_07850	COG3387	PFAM Glycoside hydrolase 15-related
CAB38_07900	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
CAB38_07935	COG0436	Aminotransferase
CAB38_07965	COG0726	polysaccharide deacetylase
CAB38_07970	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
CAB38_07985	COG3964	amidohydrolase
CAB38_07990	COG0402	S-adenosylhomocysteine deaminase activity
CAB38_08025	COG1307	EDD domain protein, DegV family
CAB38_08030	COG0242	peptide deformylase activity
CAB38_08165	COG1450	Type ii and iii secretion system protein
CAB38_08180	COG3166	PFAM Fimbrial assembly family protein
CAB38_08185	COG3156	type II secretion system protein K
CAB38_08190	COG4795	General secretion pathway protein
CAB38_08195	COG2165	general secretion pathway protein
CAB38_08200	COG4970	Tfp pilus assembly protein FimT
CAB38_08205	COG2165	general secretion pathway protein
CAB38_08210	COG1459	type II secretion system
CAB38_08220	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CAB38_08225	COG1404	Belongs to the peptidase S8 family
CAB38_08230	COG5295	Hep Hag repeat protein
CAB38_08235	COG1404	Belongs to the peptidase S8 family
CAB38_08240	COG5295	Hep Hag repeat protein
CAB38_08245	COG0047	phosphoribosylformylglycinamidine synthase activity
CAB38_08245	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CAB38_08255	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CAB38_08265	COG4974	Belongs to the 'phage' integrase family
CAB38_08280	COG0795	lipopolysaccharide-transporting ATPase activity
CAB38_08290	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
CAB38_08305	COG0525	valine-tRNA ligase activity
CAB38_08325	COG0741	lytic transglycosylase activity
CAB38_08345	COG1183	phosphatidylcholine synthase activity
CAB38_08355	COG0442	prolyl-tRNA aminoacylation
CAB38_08370	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
CAB38_08375	COG1127	ABC transporter
CAB38_08380	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
CAB38_08380	COG3218	ABC-type transport auxiliary lipoprotein component
CAB38_08415	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CAB38_08420	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
CAB38_08420	COG0662	Cupin 2, conserved barrel domain protein
CAB38_08450	COG2086	electron transfer activity
CAB38_08465	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
CAB38_08465	COG0546	phosphoglycolate phosphatase activity
CAB38_08470	COG0277	FAD linked oxidase domain protein
CAB38_08485	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CAB38_08535	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CAB38_08545	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CAB38_08550	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CAB38_08555	COG2390	Transcriptional regulator
CAB38_08570	COG3659	wide pore channel activity
CAB38_08590	COG1028	Short-chain dehydrogenase reductase Sdr
CAB38_08595	COG1070	Carbohydrate kinase
CAB38_08605	COG0194	GDP metabolic process
CAB38_08610	COG1561	YicC-like family, N-terminal region
CAB38_08615	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
CAB38_08625	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
CAB38_08630	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CAB38_08645	COG0006	proline dipeptidase activity
CAB38_08655	COG0006	proline dipeptidase activity
CAB38_08660	COG3079	Belongs to the UPF0149 family
CAB38_08680	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CAB38_08690	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
CAB38_08700	COG2912	Transglutaminase-like superfamily
CAB38_08705	COG1773	rubredoxin
CAB38_08710	COG0352	thiamine-phosphate diphosphorylase activity
CAB38_08725	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
CAB38_08740	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CAB38_08770	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CAB38_08775	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CAB38_08785	COG1028	Short-chain dehydrogenase reductase Sdr
CAB38_08795	COG0671	phosphoesterase, PA-phosphatase related
CAB38_08800	COG3781	membrane
CAB38_08810	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CAB38_08815	COG0563	adenylate kinase activity
CAB38_08840	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
CAB38_08850	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
CAB38_08880	COG3710	Transcriptional regulator
CAB38_08885	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
CAB38_08900	COG0840	transmembrane signaling receptor activity
CAB38_08910	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
CAB38_08930	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CAB38_08935	COG0473	3-isopropylmalate dehydrogenase activity
CAB38_08940	COG0066	3-isopropylmalate dehydratase activity
CAB38_08945	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
CAB38_08965	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CAB38_08970	COG1538	Outer membrane efflux protein
CAB38_08975	COG1519	Transferase
CAB38_08980	COG1560	Kdo2-lipid A biosynthetic process
CAB38_09005	COG0280	phosphate acetyltransferase
CAB38_09005	COG0281	malic enzyme
CAB38_09010	COG1301	dicarboxylic acid transport
CAB38_09040	COG0583	DNA-binding transcription factor activity
CAB38_09045	COG0667	Aldo Keto reductase
CAB38_09065	COG2197	response regulator
CAB38_09080	COG0642	Histidine kinase
CAB38_09100	COG2851	Citrate transporter
CAB38_09105	COG1028	Short-chain dehydrogenase reductase Sdr
CAB38_09110	COG1609	Transcriptional regulator
CAB38_09115	COG2211	Major facilitator Superfamily
CAB38_09140	COG1162	GTPase activity
CAB38_09160	COG1132	(ABC) transporter
CAB38_09185	COG1063	alcohol dehydrogenase
CAB38_09260	COG0251	oxidation-reduction process
CAB38_09275	COG0840	transmembrane signaling receptor activity
CAB38_09290	COG0583	DNA-binding transcription factor activity
CAB38_09360	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CAB38_09365	COG1490	D-aminoacyl-tRNA deacylase activity
CAB38_09370	COG1560	Kdo2-lipid A biosynthetic process
CAB38_09425	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CAB38_09425	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CAB38_09430	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CAB38_09435	COG0242	peptide deformylase activity
CAB38_09440	COG1652	LysM domain
CAB38_09445	COG0758	DNA mediated transformation
CAB38_09465	COG1754	DNA topoisomerase type I activity
CAB38_09465	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CAB38_09470	COG0009	L-threonylcarbamoyladenylate synthase
CAB38_09485	COG1028	Short-chain dehydrogenase reductase Sdr
CAB38_09500	COG0616	signal peptide processing
CAB38_09505	COG0534	Mate efflux family protein
CAB38_09525	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CAB38_09530	COG0625	glutathione transferase activity
CAB38_09545	COG1252	NADH dehydrogenase
CAB38_09550	COG2860	membrane
CAB38_09555	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CAB38_09560	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
CAB38_09565	COG3437	response regulator, receiver
CAB38_09570	COG2177	Part of the ABC transporter FtsEX involved in
CAB38_09575	COG2884	Cell division ATP-binding protein ftsE
CAB38_09580	COG0513	Belongs to the DEAD box helicase family
CAB38_09585	COG3118	belongs to the thioredoxin family
CAB38_09590	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CAB38_09595	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
CAB38_09600	COG0583	DNA-binding transcription factor activity
CAB38_09645	COG1518	maintenance of DNA repeat elements
CAB38_09650	COG1343	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
CAB38_09660	COG1652	LysM domain
CAB38_09665	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
CAB38_09665	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
CAB38_09670	COG1473	amidohydrolase
CAB38_09675	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CAB38_09680	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CAB38_09690	COG5383	Protein conserved in bacteria
CAB38_09740	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
CAB38_09745	COG3023	N-Acetylmuramoyl-L-alanine amidase
CAB38_09755	COG4948	Mandelate Racemase Muconate Lactonizing
CAB38_09765	COG0531	amino acid
CAB38_09780	COG4682	membrane
CAB38_09785	COG2133	pyrroloquinoline quinone binding
CAB38_09795	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
CAB38_09800	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
CAB38_09810	COG1610	YqeY-like protein
CAB38_09820	COG1295	ribonuclease BN
CAB38_09825	COG0358	DNA primase activity
CAB38_09840	COG0109	protoheme IX farnesyltransferase activity
CAB38_09870	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
CAB38_09885	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
CAB38_09925	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CAB38_09930	COG0739	heme binding
CAB38_09935	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
CAB38_09945	COG2211	Major facilitator Superfamily
CAB38_09950	COG0708	Exodeoxyribonuclease III
CAB38_09955	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CAB38_09965	COG1192	Involved in chromosome partitioning
CAB38_09970	COG1475	DNA binding
CAB38_09990	COG0463	Glycosyl transferase, family 2
CAB38_10010	COG0756	dUTP diphosphatase activity
CAB38_10015	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CAB38_10020	COG2003	Belongs to the UPF0758 family
CAB38_10025	COG0018	arginyl-trna synthetase
CAB38_10040	COG4221	oxidoreductase activity
CAB38_10045	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
CAB38_10045	COG2755	lipolytic protein G-D-S-L family
CAB38_10055	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CAB38_10060	COG1166	arginine decarboxylase activity
CAB38_10065	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
CAB38_10110	COG2960	long-chain fatty acid transporting porin activity
CAB38_10115	COG0606	chelatase, subunit chli
CAB38_10130	COG4943	cyclic-guanylate-specific phosphodiesterase activity
CAB38_10165	COG1690	Belongs to the RtcB family
CAB38_10205	COG0745	RESPONSE REGULATOR receiver
CAB38_10210	COG0642	Histidine kinase
CAB38_10240	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CAB38_10270	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CAB38_10275	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
CAB38_10290	COG0753	catalase activity
CAB38_10315	COG2197	response regulator
CAB38_10320	COG4585	Histidine kinase
CAB38_10325	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CAB38_10330	COG1136	(ABC) transporter
CAB38_10355	COG0697	spore germination
CAB38_10375	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CAB38_10380	COG0180	Tryptophanyl-tRNA synthetase
CAB38_10385	COG3237	CsbD-like
CAB38_10430	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CAB38_10480	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
CAB38_10485	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
CAB38_10485	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
CAB38_10515	COG2205	protein histidine kinase activity
CAB38_10520	COG0745	RESPONSE REGULATOR receiver
CAB38_10530	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CAB38_10560	COG1199	ATP-dependent helicase activity
CAB38_10575	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CAB38_10640	COG0625	glutathione transferase activity
CAB38_10680	COG4555	ABC transporter
CAB38_10690	COG1476	TRANSCRIPTIONal
CAB38_10735	COG0633	Ferredoxin
CAB38_10735	COG0543	2 iron, 2 sulfur cluster binding
CAB38_10740	COG1131	(ABC) transporter
CAB38_10745	COG0842	Transport permease protein
CAB38_10755	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CAB38_10790	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CAB38_10800	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CAB38_10815	COG1042	CoA-binding domain protein
CAB38_10815	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CAB38_10815	COG0045	succinate-CoA ligase (ADP-forming) activity
CAB38_10820	COG2239	Acts as a magnesium transporter
CAB38_10840	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CAB38_10845	COG3387	PFAM Glycoside hydrolase 15-related
CAB38_10860	COG3100	YcgL domain-containing protein
CAB38_10865	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CAB38_10875	COG0463	Glycosyl transferase, family 2
CAB38_10885	COG1028	Short-chain dehydrogenase reductase Sdr
CAB38_10925	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CAB38_10940	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CAB38_10970	COG4946	Tricorn protease homolog
CAB38_10970	COG1506	peptidase
CAB38_10970	COG0823	Involved in the tonB-independent uptake of proteins
CAB38_10990	COG0408	coproporphyrinogen oxidase activity
CAB38_11030	COG0515	serine threonine protein kinase
CAB38_11035	COG0631	protein serine/threonine phosphatase activity
CAB38_11070	COG3501	Rhs element vgr protein
CAB38_11230	COG0210	DNA helicase
CAB38_11245	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CAB38_11255	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
CAB38_11270	COG2159	amidohydrolase
CAB38_11300	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CAB38_11320	COG0357	Ribosomal RNA small subunit methyltransferase G
CAB38_11325	COG3540	Alkaline phosphatase
CAB38_11335	COG2091	lysine biosynthetic process via aminoadipic acid
CAB38_11350	COG0708	Exodeoxyribonuclease III
CAB38_11355	COG1846	Transcriptional regulator
CAB38_11355	COG1940	carbohydrate kinase activity
CAB38_11365	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CAB38_11375	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CAB38_11380	COG3162	membrane
CAB38_11390	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CAB38_11420	COG3507	Belongs to the glycosyl hydrolase 43 family
CAB38_11440	COG1028	Short-chain dehydrogenase reductase Sdr
CAB38_11445	COG0179	Fumarylacetoacetate (FAA) hydrolase
CAB38_11455	COG4948	Mandelate Racemase Muconate Lactonizing
CAB38_11460	COG3254	rhamnose metabolic process
CAB38_11465	COG0738	Major facilitator superfamily
CAB38_11470	COG1414	Transcriptional regulator
CAB38_11480	COG1971	Probably functions as a manganese efflux pump
CAB38_11485	COG2205	protein histidine kinase activity
CAB38_11500	COG3459	Glycosyltransferase 36 associated
CAB38_11505	COG2211	Major facilitator Superfamily
CAB38_11510	COG3265	gluconokinase activity
CAB38_11520	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CAB38_11540	COG2911	Protein conserved in bacteria
CAB38_11545	COG0729	surface antigen
CAB38_11595	COG0752	glycyl-tRNA synthetase alpha subunit
CAB38_11615	COG0518	GMP synthase (glutamine-hydrolyzing) activity
CAB38_11615	COG0519	Catalyzes the synthesis of GMP from XMP
CAB38_11625	COG0805	protein transport
CAB38_11630	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CAB38_11635	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CAB38_11645	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
CAB38_11670	COG2974	May be involved in recombination
CAB38_11675	COG0037	tRNA processing
CAB38_11685	COG2115	Belongs to the xylose isomerase family
CAB38_11705	COG4948	Mandelate Racemase Muconate Lactonizing
CAB38_11715	COG1472	Belongs to the glycosyl hydrolase 3 family
CAB38_11775	COG3002	Belongs to the UPF0753 family
CAB38_11840	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
CAB38_11890	COG3012	SEC-C Motif Domain Protein
CAB38_11890	COG3318	Belongs to the UPF0149 family
CAB38_11910	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
CAB38_11920	COG3132	Protein of unknown function, DUF480
CAB38_11930	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
CAB38_11935	COG0284	orotidine-5'-phosphate decarboxylase activity
CAB38_11970	COG2937	Belongs to the GPAT DAPAT family
CAB38_12005	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
CAB38_12090	COG0366	Alpha amylase catalytic
CAB38_12095	COG0366	Alpha amylase catalytic
CAB38_12100	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
CAB38_12120	COG0657	acetylesterase activity
CAB38_12120	COG2755	lipolytic protein G-D-S-L family
CAB38_12130	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
CAB38_12145	COG3507	Belongs to the glycosyl hydrolase 43 family
CAB38_12150	COG1609	Transcriptional regulator
CAB38_12160	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
CAB38_12165	COG1028	Short-chain dehydrogenase reductase Sdr
CAB38_12175	COG2755	lipolytic protein G-D-S-L family
CAB38_12190	COG3186	Phenylalanine-4-hydroxylase
CAB38_12195	COG1522	sequence-specific DNA binding
CAB38_12205	COG1752	Esterase of the alpha-beta hydrolase superfamily
CAB38_12215	COG1119	ATPase activity
CAB38_12230	COG1125	glycine betaine transport
CAB38_12245	COG1262	PFAM Formylglycine-generating sulfatase enzyme
CAB38_12280	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
CAB38_12310	COG0210	DNA helicase
CAB38_12330	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
CAB38_12360	COG3135	benzoate transporter
CAB38_12380	COG0676	glucose-6-phosphate 1-epimerase activity
CAB38_12390	COG3012	SEC-C Motif Domain Protein
CAB38_12395	COG0730	response to heat
CAB38_12415	COG0302	gtp cyclohydrolase
CAB38_12430	COG1566	PFAM secretion protein HlyD family protein
CAB38_12440	COG1289	transmembrane transporter activity
CAB38_12445	COG0477	Major facilitator Superfamily
CAB38_12455	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CAB38_12475	COG4691	Plasmid stability protein
CAB38_12480	COG1487	ribonuclease activity
CAB38_12500	COG1028	Short-chain dehydrogenase reductase Sdr
CAB38_12510	COG1309	transcriptional regulator
CAB38_12550	COG0564	pseudouridine synthase activity
CAB38_12600	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
CAB38_12650	COG0070	glutamate synthase
CAB38_12650	COG0067	glutamate synthase
CAB38_12650	COG0069	glutamate synthase activity
CAB38_12655	COG0493	'glutamate synthase
CAB38_12660	COG1064	alcohol dehydrogenase
CAB38_12670	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
CAB38_12680	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
CAB38_12690	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
CAB38_12700	COG2234	aminopeptidase activity
CAB38_12710	COG4942	peptidase
CAB38_12715	COG0793	Belongs to the peptidase S41A family
CAB38_12770	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CAB38_12780	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
CAB38_12810	COG0501	Belongs to the peptidase M48B family
CAB38_12820	COG0187	DNA topoisomerase II activity
CAB38_12825	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CAB38_12835	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
CAB38_12845	COG0594	ribonuclease P activity
CAB38_12850	COG0706	membrane insertase activity
CAB38_12855	COG0726	polysaccharide deacetylase
CAB38_12860	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
CAB38_12875	COG0584	glycerophosphoryl diester phosphodiesterase
CAB38_12890	COG0861	Integral membrane protein TerC family
CAB38_12900	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
CAB38_12945	COG0531	amino acid
CAB38_12955	COG0625	glutathione transferase activity
CAB38_12970	COG0583	DNA-binding transcription factor activity
CAB38_12975	COG0604	alcohol dehydrogenase
CAB38_12980	COG1322	Protein conserved in bacteria
CAB38_12990	COG0386	Belongs to the glutathione peroxidase family
CAB38_13000	COG2853	Lipoprotein
CAB38_13015	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
CAB38_13020	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
CAB38_13025	COG1127	ABC transporter
CAB38_13040	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
CAB38_13045	COG1074	ATP-dependent DNA helicase activity
CAB38_13065	COG3039	Transposase
CAB38_13120	COG0297	glycogen (starch) synthase activity
CAB38_13120	COG0438	transferase activity, transferring glycosyl groups
CAB38_13170	COG1132	(ABC) transporter
CAB38_13200	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
CAB38_13300	COG1205	dead DEAH box helicase
CAB38_13300	COG1111	helicase
CAB38_13305	COG1272	protein, Hemolysin III
CAB38_13325	COG0300	oxidoreductase activity
CAB38_13330	COG1028	Short-chain dehydrogenase reductase Sdr
CAB38_13345	COG2249	NAD(P)H dehydrogenase (quinone) activity
CAB38_13370	COG3237	CsbD-like
CAB38_13420	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CAB38_13430	COG0477	Major facilitator Superfamily
CAB38_13470	COG0714	Associated with various cellular activities
CAB38_13500	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
CAB38_13510	COG4772	TonB-dependent receptor
CAB38_13520	COG0662	Cupin 2, conserved barrel domain protein
CAB38_13590	COG0489	protein tyrosine kinase activity
CAB38_13595	COG2062	phosphohistidine phosphatase, SixA
CAB38_13605	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CAB38_13655	COG1968	undecaprenyl-diphosphatase activity
CAB38_13665	COG0174	glutamine synthetase
CAB38_13670	COG0347	Belongs to the P(II) protein family
CAB38_13675	COG0004	ammonium transporteR
CAB38_13680	COG3852	Histidine kinase
CAB38_13685	COG2204	response regulator
CAB38_13690	COG2032	superoxide dismutase activity
CAB38_13695	COG2032	superoxide dismutase activity
CAB38_13710	COG0183	Belongs to the thiolase family
CAB38_13745	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CAB38_13750	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
CAB38_13755	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
CAB38_13815	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CAB38_13820	COG4786	Flagellar basal body rod
CAB38_13825	COG4786	Flagellar basal body rod
CAB38_13840	COG1706	bacterial-type flagellum-dependent cell motility
CAB38_13855	COG1677	Flagellar hook-basal body complex protein FliE
CAB38_13860	COG1766	The M ring may be actively involved in energy transduction
CAB38_13875	COG1157	protein secretion by the type III secretion system
CAB38_13900	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
CAB38_13935	COG0028	Belongs to the TPP enzyme family
CAB38_13940	COG2205	protein histidine kinase activity
CAB38_13965	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
CAB38_13980	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CAB38_13990	COG0596	Alpha beta hydrolase
CAB38_13995	COG0727	PFAM Uncharacterised protein family (UPF0153)
CAB38_14000	COG0318	PFAM AMP-dependent synthetase and ligase
CAB38_14005	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CAB38_14020	COG1181	Belongs to the D-alanine--D-alanine ligase family
CAB38_14030	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
CAB38_14040	COG0564	pseudouridine synthase activity
CAB38_14060	COG1446	asparaginase
CAB38_14065	COG0339	signal peptide processing
CAB38_14095	COG0475	glutathione-regulated potassium exporter activity
CAB38_14100	COG0583	DNA-binding transcription factor activity
CAB38_14105	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
CAB38_14110	COG2224	Isocitrate lyase
CAB38_14115	COG3706	GGDEF domain
CAB38_14150	COG4770	biotin carboxylase activity
CAB38_14155	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
CAB38_14160	COG1960	acyl-CoA dehydrogenase activity
CAB38_14165	COG1309	transcriptional regulator
CAB38_14220	COG0523	cobalamin synthesis protein
CAB38_14240	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
CAB38_14245	COG1846	Transcriptional regulator
CAB38_14250	COG1764	response to oxidative stress
CAB38_14280	COG2130	NADP-dependent
CAB38_14295	COG1187	pseudouridine synthase activity
CAB38_14315	COG4807	Protein conserved in bacteria
CAB38_14320	COG2351	hydroxyisourate hydrolase activity
CAB38_14325	COG2072	flavoprotein involved in K transport
CAB38_14345	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
CAB38_14380	COG1957	nucleoside hydrolase
CAB38_14390	COG2252	PERMEase
CAB38_14415	COG0084	hydrolase, TatD family'
CAB38_14435	COG0583	DNA-binding transcription factor activity
CAB38_14440	COG2814	Major facilitator Superfamily
CAB38_14455	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CAB38_14460	COG1902	pentaerythritol trinitrate reductase activity
CAB38_14480	COG0745	RESPONSE REGULATOR receiver
CAB38_14485	COG2205	protein histidine kinase activity
CAB38_14490	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CAB38_14515	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
CAB38_14520	COG0583	DNA-binding transcription factor activity
CAB38_14555	COG0702	epimerase
CAB38_14560	COG1733	regulation of RNA biosynthetic process
CAB38_14605	COG0129	dihydroxy-acid dehydratase activity
CAB38_14620	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
CAB38_14680	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CAB38_14685	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CAB38_14715	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
CAB38_14720	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
CAB38_14730	COG3485	protocatechuate 3,4-dioxygenase
CAB38_14745	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CAB38_14750	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CAB38_14760	COG1414	Transcriptional regulator
CAB38_14780	COG0445	tRNA wobble uridine modification
CAB38_14825	COG2267	carboxylic ester hydrolase activity
CAB38_14840	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
CAB38_14845	COG1040	competence protein
CAB38_14850	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
CAB38_14940	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CAB38_15010	COG1511	domain protein
CAB38_15010	COG3264	Mechanosensitive ion channel
CAB38_15015	COG1368	sulfuric ester hydrolase activity
CAB38_15025	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
CAB38_15030	COG2354	Protein conserved in bacteria
CAB38_15040	COG0297	glycogen (starch) synthase activity
CAB38_15045	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
CAB38_15050	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
CAB38_15075	COG0702	epimerase
CAB38_15080	COG1028	Short-chain dehydrogenase reductase Sdr
CAB38_15115	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CAB38_15120	COG1028	Short-chain dehydrogenase reductase Sdr
CAB38_15135	COG0513	Belongs to the DEAD box helicase family
CAB38_15155	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CAB38_15165	COG3483	tryptophan 2,3-dioxygenase activity
CAB38_15170	COG3104	oligopeptide transport
CAB38_15195	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
CAB38_15215	COG1320	monovalent cation:proton antiporter activity
CAB38_15220	COG2212	antiporter activity
CAB38_15230	COG0651	ATP synthesis coupled electron transport
CAB38_15235	COG1006	Multisubunit Na H antiporter MnhC subunit
CAB38_15240	COG2111	Na H antiporter
CAB38_15240	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CAB38_15265	COG3179	chitinase
CAB38_15285	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
CAB38_15290	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
CAB38_15305	COG0456	acetyltransferase
CAB38_15310	COG1597	lipid kinase activity
CAB38_15335	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CAB38_15340	COG0134	indole-3-glycerol-phosphate synthase activity
CAB38_15350	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CAB38_15355	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
CAB38_15365	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
CAB38_15375	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
CAB38_15390	COG1051	belongs to the nudix hydrolase family
CAB38_15430	COG0316	Belongs to the HesB IscA family
CAB38_15450	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
CAB38_15470	COG2814	Major facilitator Superfamily
CAB38_15480	COG2814	Major facilitator Superfamily
CAB38_15485	COG1289	transmembrane transporter activity
CAB38_15495	COG0151	Belongs to the GarS family
CAB38_15505	COG0138	bifunctional purine biosynthesis protein purh
CAB38_15510	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CAB38_15515	COG2267	carboxylic ester hydrolase activity
CAB38_15520	COG0671	phosphoesterase, PA-phosphatase related
CAB38_15520	COG2453	phosphatase
CAB38_15545	COG4589	Belongs to the CDS family
CAB38_15550	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
CAB38_15575	COG2264	protein methyltransferase activity
CAB38_15595	COG0439	Biotin carboxylase
CAB38_15605	COG0511	ligase activity, forming carbon-carbon bonds
CAB38_15610	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
CAB38_15620	COG1324	tolerance protein
CAB38_15650	COG0300	oxidoreductase activity
CAB38_15660	COG2356	endonuclease I
CAB38_15670	COG0459	protein refolding
CAB38_15685	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CAB38_15700	COG3386	PFAM SMP-30 Gluconolaconase
CAB38_15710	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
CAB38_15715	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
CAB38_15735	COG0778	Nitroreductase
CAB38_15740	COG2353	YceI-like domain
CAB38_15770	COG3052	prosthetic group binding
CAB38_15805	COG1802	Transcriptional regulator
CAB38_15930	COG4221	oxidoreductase activity
CAB38_15945	COG4221	oxidoreductase activity
CAB38_15960	COG0435	Glutathione S-transferase
CAB38_15985	COG2409	Drug exporters of the RND superfamily
CAB38_15995	COG1506	peptidase
CAB38_15995	COG0823	Involved in the tonB-independent uptake of proteins
CAB38_16015	COG3706	GGDEF domain
CAB38_16040	COG0697	spore germination
CAB38_16055	COG1113	amino acid transport
CAB38_16075	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
CAB38_16125	COG5001	Diguanylate cyclase
CAB38_16135	COG0840	transmembrane signaling receptor activity
CAB38_16140	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
CAB38_16140	COG5297	Belongs to the glycosyl hydrolase family 6
CAB38_16145	COG0659	secondary active sulfate transmembrane transporter activity
CAB38_16155	COG3706	GGDEF domain
CAB38_16175	COG2943	transferase activity, transferring hexosyl groups
CAB38_16185	COG3275	phosphorelay sensor kinase activity
CAB38_16195	COG0181	hydroxymethylbilane synthase activity
CAB38_16235	COG1505	serine-type exopeptidase activity
CAB38_16255	COG2832	Protein of unknown function (DUF454)
CAB38_16265	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
CAB38_16275	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
CAB38_16280	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
CAB38_16285	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
CAB38_16310	COG2226	methyltransferase
CAB38_16315	COG2199	diguanylate cyclase activity
CAB38_16320	COG0308	aminopeptidase N
CAB38_16365	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CAB38_16370	COG1028	Short-chain dehydrogenase reductase Sdr
CAB38_16390	COG1294	oxidase, subunit
CAB38_16395	COG1271	oxidase subunit
CAB38_16445	COG3546	catalase activity
CAB38_16450	COG3685	Protein conserved in bacteria
CAB38_16475	COG2972	Histidine kinase
CAB38_16490	COG0531	amino acid
CAB38_16510	COG3590	peptidase
CAB38_16525	COG0667	Aldo Keto reductase
CAB38_16535	COG0583	DNA-binding transcription factor activity
CAB38_16545	COG3384	dioxygenase
CAB38_16555	COG1573	uracil-dna glycosylase
CAB38_16560	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
CAB38_16570	COG0025	NhaP-type Na H and K H
CAB38_16575	COG1131	(ABC) transporter
CAB38_16580	COG0842	Transport permease protein
CAB38_16640	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CAB38_16645	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CAB38_16665	COG2202	Pas domain
CAB38_16665	COG2205	protein histidine kinase activity
CAB38_16685	COG2813	Specifically methylates the guanine in position
CAB38_16690	COG1187	pseudouridine synthase activity
CAB38_16695	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CAB38_16720	COG0784	Response regulator, receiver
CAB38_16720	COG2198	Histidine kinase
CAB38_16720	COG5002	protein histidine kinase activity
CAB38_16730	COG1666	GTP binding
CAB38_16735	COG0697	spore germination
CAB38_16740	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CAB38_16745	COG2011	ABC-type metal ion transport system permease component
CAB38_16790	COG0508	dehydrogenase complex catalyzes the overall conversion of
CAB38_16800	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CAB38_16820	COG0356	it plays a direct role in the translocation of protons across the membrane
CAB38_16830	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
CAB38_16835	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CAB38_16840	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
CAB38_16845	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
CAB38_16850	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
CAB38_16855	COG0355	proton-transporting ATP synthase activity, rotational mechanism
CAB38_16870	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CAB38_16875	COG4191	Histidine kinase
CAB38_16890	COG0577	efflux transmembrane transporter activity
CAB38_16895	COG0577	efflux transmembrane transporter activity
CAB38_16900	COG1136	(ABC) transporter
CAB38_16900	COG4591	ABC-type transport system involved in lipoprotein release permease component
CAB38_16905	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CAB38_16910	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CAB38_16965	COG0339	signal peptide processing
CAB38_16980	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CAB38_16985	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CAB38_17000	COG2819	hydrolase of the alpha beta superfamily
CAB38_17010	COG1956	GAF domain-containing protein
CAB38_17020	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
CAB38_17030	COG0720	synthase
CAB38_17040	COG4206	TonB-dependent receptor
CAB38_17050	COG0513	Belongs to the DEAD box helicase family
CAB38_17065	COG0625	glutathione transferase activity
CAB38_17095	COG0626	cystathionine gamma-synthase activity
CAB38_17115	COG1216	Glycosyl transferase, family 2
CAB38_17115	COG0438	transferase activity, transferring glycosyl groups
CAB38_17135	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
CAB38_17165	COG0714	Associated with various cellular activities
CAB38_17185	COG2304	oxidoreductase activity
CAB38_17200	COG1301	dicarboxylic acid transport
CAB38_17205	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CAB38_17210	COG0596	Alpha beta hydrolase
CAB38_17215	COG4773	Receptor
CAB38_17225	COG0739	heme binding
CAB38_17230	COG1376	ErfK ybiS ycfS ynhG family protein
CAB38_17265	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
CAB38_17270	COG4149	molybdate abc transporter
CAB38_17275	COG0725	ABC transporter, periplasmic molybdate-binding protein
CAB38_17280	COG3453	Protein conserved in bacteria
CAB38_17280	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CAB38_17290	COG3047	cAMP biosynthetic process
CAB38_17295	COG3047	cAMP biosynthetic process
CAB38_17360	COG2010	Cytochrome c
CAB38_17380	COG3284	Transcriptional regulator
CAB38_17385	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CAB38_17390	COG1077	Cell shape determining protein MreB Mrl
CAB38_17395	COG1792	Involved in formation and maintenance of cell shape
CAB38_17410	COG0772	Belongs to the SEDS family
CAB38_17420	COG2951	lytic endotransglycosylase activity
CAB38_17425	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CAB38_17435	COG1686	Belongs to the peptidase S11 family
CAB38_17445	COG2921	Belongs to the UPF0250 family
CAB38_17450	COG0321	lipoyl(octanoyl) transferase activity
CAB38_17455	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
CAB38_17470	COG0583	DNA-binding transcription factor activity
CAB38_17480	COG1056	cytidyltransferase-related domain
CAB38_17480	COG1051	belongs to the nudix hydrolase family
CAB38_17515	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
CAB38_17520	COG0673	inositol 2-dehydrogenase activity
CAB38_17525	COG2823	Periplasmic or secreted lipoprotein
CAB38_17530	COG4251	negative regulation of phosphorylation
CAB38_17535	COG0784	Response regulator, receiver
CAB38_17540	COG4191	Histidine kinase
CAB38_17545	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
CAB38_17605	COG1459	type II secretion system
CAB38_17625	COG4795	General secretion pathway protein
CAB38_17655	COG3250	beta-galactosidase activity
CAB38_17670	COG2188	Transcriptional regulator
CAB38_17680	COG1609	Transcriptional regulator
CAB38_17685	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CAB38_17690	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CAB38_17700	COG0617	tRNA 3'-terminal CCA addition
CAB38_17705	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
CAB38_17710	COG1012	belongs to the aldehyde dehydrogenase family
CAB38_17745	COG0218	Necessary for normal cell division and for the maintenance of normal septation
CAB38_17750	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
CAB38_17770	COG2205	protein histidine kinase activity
CAB38_17775	COG0745	RESPONSE REGULATOR receiver
CAB38_17800	COG3791	Glutathione-dependent formaldehyde-activating
CAB38_17815	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CAB38_17825	COG0697	spore germination
CAB38_17835	COG0488	(ABC) transporter
CAB38_17845	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
CAB38_17850	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
CAB38_17860	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CAB38_17860	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CAB38_17880	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
CAB38_17885	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CAB38_17890	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
CAB38_17915	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
CAB38_17920	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
CAB38_17925	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
CAB38_17930	COG2205	protein histidine kinase activity
CAB38_17935	COG0745	RESPONSE REGULATOR receiver
CAB38_17960	COG0277	FAD linked oxidase domain protein
CAB38_17965	COG1988	membrane-bound metal-dependent
CAB38_17970	COG0792	nuclease activity
CAB38_18010	COG0275	rRNA processing
CAB38_18015	COG3116	cell division
CAB38_18025	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CAB38_18030	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
CAB38_18035	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CAB38_18045	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CAB38_18050	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CAB38_18055	COG1181	Belongs to the D-alanine--D-alanine ligase family
CAB38_18060	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
CAB38_18075	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
CAB38_18090	COG0653	protein targeting
CAB38_18095	COG0494	nUDIX hydrolase
CAB38_18105	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
CAB38_18120	COG1028	Short-chain dehydrogenase reductase Sdr
CAB38_18120	COG3321	synthase
CAB38_18120	COG0604	alcohol dehydrogenase
CAB38_18155	COG0366	Alpha amylase catalytic
CAB38_18190	COG2226	methyltransferase
CAB38_18195	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
CAB38_18205	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
CAB38_18255	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
CAB38_18265	COG4106	trans-aconitate 2-methyltransferase activity
CAB38_18270	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CAB38_18280	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CAB38_18285	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CAB38_18295	COG0667	Aldo Keto reductase
CAB38_18305	COG4771	TonB-dependent receptor
CAB38_18325	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CAB38_18330	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
CAB38_18340	COG2175	clavaminate synthase activity
CAB38_18350	COG4181	ATPase activity
CAB38_18365	COG0642	Histidine kinase
CAB38_18385	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
CAB38_18410	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
CAB38_18415	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
CAB38_18430	COG3829	transcription factor binding
CAB38_18440	COG1116	anion transmembrane transporter activity
CAB38_18445	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CAB38_18455	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CAB38_18460	COG0431	NADPH-dependent FMN reductase
CAB38_18485	COG0747	negative chemotaxis
CAB38_18505	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
CAB38_18510	COG2967	ApaG domain
CAB38_18515	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
CAB38_18520	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
CAB38_18525	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CAB38_18530	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
CAB38_18535	COG0123	including yeast histone deacetylase and acetoin utilization protein
CAB38_18540	COG2096	Adenosyltransferase
CAB38_18555	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CAB38_18560	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CAB38_18590	COG3384	dioxygenase
CAB38_18595	COG0583	DNA-binding transcription factor activity
CAB38_18600	COG0318	PFAM AMP-dependent synthetase and ligase
CAB38_18610	COG1024	Enoyl-CoA hydratase
CAB38_18630	COG3386	PFAM SMP-30 Gluconolaconase
CAB38_18645	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
CAB38_18665	COG0697	spore germination
CAB38_18675	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CAB38_18710	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CAB38_18720	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CAB38_18725	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CAB38_18735	COG0583	DNA-binding transcription factor activity
CAB38_18740	COG3634	alkyl hydroperoxide reductase activity
CAB38_18750	COG2890	protein-(glutamine-N5) methyltransferase activity
CAB38_18770	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CAB38_18770	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CAB38_18800	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
CAB38_18820	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
CAB38_18840	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CAB38_18850	COG1404	Belongs to the peptidase S8 family
CAB38_18860	COG1404	Belongs to the peptidase S8 family
CAB38_18865	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CAB38_18890	COG1295	ribonuclease BN
CAB38_18895	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CAB38_18900	COG1254	Belongs to the acylphosphatase family
CAB38_18930	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
CAB38_18935	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
CAB38_18945	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
CAB38_18950	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
CAB38_18960	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CAB38_18965	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
CAB38_18970	COG0193	aminoacyl-tRNA hydrolase activity
CAB38_18975	COG0012	GTP binding
CAB38_18995	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CAB38_19010	COG0250	Participates in transcription elongation, termination and antitermination
CAB38_19015	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
CAB38_19020	COG0081	regulation of translation
CAB38_19025	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
CAB38_19030	COG0222	ribosome binding
CAB38_19035	COG0085	RNA polymerase activity
CAB38_19040	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CAB38_19045	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
CAB38_19050	COG0049	tRNA binding
CAB38_19055	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CAB38_19060	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CAB38_19065	COG0051	transcription antitermination factor activity, RNA binding
CAB38_19070	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
CAB38_19075	COG0088	Forms part of the polypeptide exit tunnel
CAB38_19080	COG0089	rRNA binding
CAB38_19085	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
CAB38_19090	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
CAB38_19100	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
CAB38_19105	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
CAB38_19110	COG0255	Belongs to the universal ribosomal protein uL29 family
CAB38_19115	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
CAB38_19125	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
CAB38_19130	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
CAB38_19140	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
CAB38_19145	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
CAB38_19150	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
CAB38_19160	COG1841	ribosomal large subunit assembly
CAB38_19165	COG0200	Binds to the 23S rRNA
CAB38_19170	COG0201	protein transport
CAB38_19195	COG0203	ribosomal protein L17
CAB38_19200	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
CAB38_19220	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
CAB38_19230	COG0154	amidase activity
CAB38_19245	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CAB38_19250	COG0039	L-malate dehydrogenase activity
CAB38_19255	COG0625	glutathione transferase activity
CAB38_19275	COG1902	pentaerythritol trinitrate reductase activity
CAB38_19275	COG0446	pyridine nucleotide-disulphide oxidoreductase
CAB38_19280	COG0604	alcohol dehydrogenase
CAB38_19310	COG0156	8-amino-7-oxononanoate synthase activity
CAB38_19315	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
CAB38_19320	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
CAB38_19325	COG4208	sulfate ABC transporter
CAB38_19330	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
CAB38_19340	COG1063	alcohol dehydrogenase
CAB38_19375	COG0406	alpha-ribazole phosphatase activity
CAB38_19385	COG0285	dihydrofolate synthase activity
CAB38_19405	COG2833	Protein of unknown function (DUF455)
CAB38_19425	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CAB38_19430	COG0671	phosphoesterase, PA-phosphatase related
CAB38_19435	COG0438	transferase activity, transferring glycosyl groups
CAB38_19445	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
CAB38_19460	COG4783	chaperone-mediated protein folding
CAB38_19475	COG0473	3-isopropylmalate dehydrogenase activity
CAB38_19505	COG3852	Histidine kinase
CAB38_19515	COG0544	peptidyl-prolyl cis-trans isomerase activity
CAB38_19525	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
CAB38_19550	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CAB38_19560	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CAB38_19570	COG0328	RNA-DNA hybrid ribonuclease activity
CAB38_19575	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CAB38_19580	COG0631	protein serine/threonine phosphatase activity
CAB38_19595	COG0859	PFAM glycosyl transferase family 9
CAB38_19600	COG3642	lipopolysaccharide core region biosynthetic process
CAB38_19605	COG1234	tRNA 3'-trailer cleavage
CAB38_19610	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CAB38_19615	COG0315	cyclic pyranopterin monophosphate synthase activity
CAB38_19620	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
CAB38_19625	COG0314	molybdopterin synthase activity
CAB38_19645	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
CAB38_19650	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
CAB38_19655	COG0537	adenosine 5'-monophosphoramidase activity
CAB38_19675	COG0714	Associated with various cellular activities
CAB38_19765	COG1215	transferase activity, transferring glycosyl groups
CAB38_19770	COG1649	PFAM Uncharacterised BCR, COG1649
CAB38_19770	COG0726	polysaccharide deacetylase
CAB38_19865	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CAB38_19870	COG0124	histidyl-tRNA synthetase
CAB38_19880	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
CAB38_19885	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
CAB38_19890	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CAB38_19895	COG0131	Imidazoleglycerol-phosphate dehydratase
CAB38_19895	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
CAB38_19900	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
CAB38_19905	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
CAB38_19910	COG0107	imidazoleglycerol-phosphate synthase activity
CAB38_19915	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
CAB38_19915	COG0140	phosphoribosyl-ATP diphosphatase activity
CAB38_19930	COG4229	Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene)
CAB38_19935	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
CAB38_19940	COG0235	Class ii aldolase
CAB38_19945	COG0531	amino acid
CAB38_19950	COG0531	amino acid
CAB38_19960	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CAB38_19965	COG0277	FAD linked oxidase domain protein
CAB38_19985	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CAB38_20035	COG2258	MOSC domain
CAB38_20040	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
CAB38_20045	COG0505	Belongs to the CarA family
CAB38_20055	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
CAB38_20060	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CAB38_20070	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
CAB38_20120	COG3279	Response regulator of the LytR AlgR family
CAB38_20130	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
CAB38_20140	COG2205	protein histidine kinase activity
CAB38_20140	COG0784	Response regulator, receiver
CAB38_20140	COG2198	Histidine kinase
CAB38_20145	COG1024	Enoyl-CoA hydratase
CAB38_20180	COG0318	PFAM AMP-dependent synthetase and ligase
CAB38_20210	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CAB38_20220	COG2201	protein-glutamate methylesterase activity
CAB38_20225	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
CAB38_20235	COG0840	transmembrane signaling receptor activity
CAB38_20245	COG0835	chemotaxis
CAB38_20260	COG0840	transmembrane signaling receptor activity
CAB38_20265	COG0840	transmembrane signaling receptor activity
CAB38_20270	COG0840	transmembrane signaling receptor activity
CAB38_20275	COG0840	transmembrane signaling receptor activity
CAB38_20280	COG0840	transmembrane signaling receptor activity
CAB38_20290	COG0840	transmembrane signaling receptor activity
CAB38_20295	COG0840	transmembrane signaling receptor activity
CAB38_20315	COG0840	transmembrane signaling receptor activity
CAB38_20320	COG0840	transmembrane signaling receptor activity
CAB38_20335	COG0840	transmembrane signaling receptor activity
CAB38_20350	COG0840	transmembrane signaling receptor activity
CAB38_20355	COG2198	Histidine kinase
CAB38_20355	COG0643	Histidine kinase
CAB38_20360	COG0745	RESPONSE REGULATOR receiver
CAB38_20370	COG0835	chemotaxis
CAB38_20380	COG1360	Flagellar Motor Protein
CAB38_20385	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
CAB38_20425	COG0641	radical SAM
CAB38_20440	COG0643	Histidine kinase
CAB38_20440	COG0784	Response regulator, receiver
CAB38_20440	COG2198	Histidine kinase
CAB38_20470	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CAB38_20495	COG3300	MHYT domain
CAB38_20495	COG5001	Diguanylate cyclase
CAB38_20500	COG1684	flagellar biosynthetic protein fliR
CAB38_20520	COG3190	flagellar
CAB38_20570	COG1677	Flagellar hook-basal body complex protein FliE
CAB38_20615	COG1028	Short-chain dehydrogenase reductase Sdr
CAB38_20620	COG1028	Short-chain dehydrogenase reductase Sdr
CAB38_20625	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CAB38_20655	COG2201	protein-glutamate methylesterase activity
CAB38_20685	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
CAB38_20690	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CAB38_20695	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CAB38_20705	COG3951	Flagellar rod assembly protein muramidase FlgJ
CAB38_20705	COG1705	Flagellar rod assembly protein muramidase FlgJ
CAB38_20710	COG1706	bacterial-type flagellum-dependent cell motility
CAB38_20715	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
CAB38_20730	COG4787	bacterial-type flagellum-dependent cell motility
CAB38_20740	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
CAB38_20745	COG1558	bacterial-type flagellum-dependent cell motility
CAB38_20755	COG0835	chemotaxis
CAB38_20755	COG0784	Response regulator, receiver
CAB38_20775	COG5002	protein histidine kinase activity
CAB38_20805	COG2915	High frequency lysogenization protein hflD homolog
CAB38_20810	COG0482	sulfurtransferase activity
CAB38_20825	COG0542	response to heat
CAB38_20835	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
CAB38_20845	COG0492	ferredoxin-NADP+ reductase activity
CAB38_20850	COG1674	ftsk spoiiie
CAB38_20860	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
CAB38_20870	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
CAB38_20875	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CAB38_20885	COG0183	Belongs to the thiolase family
CAB38_20890	COG1024	Enoyl-CoA hydratase
CAB38_20890	COG1250	3-hydroxyacyl-CoA dehydrogenase
CAB38_20905	COG0820	rRNA (adenine-C2-)-methyltransferase activity
CAB38_20915	COG1426	Protein conserved in bacteria
CAB38_20925	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CAB38_20930	COG1160	GTP binding
CAB38_20935	COG0303	'Molybdopterin
CAB38_20945	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CAB38_20985	COG0708	Exodeoxyribonuclease III
CAB38_20995	COG0303	'Molybdopterin
CAB38_21000	COG0746	molybdenum cofactor guanylyltransferase activity
CAB38_21010	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
CAB38_21010	COG1648	precorrin-2 dehydrogenase activity
CAB38_21050	COG3685	Protein conserved in bacteria
CAB38_21085	COG4566	intracellular signal transduction
CAB38_21105	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CAB38_21135	COG0477	Major facilitator Superfamily
CAB38_21145	COG5002	protein histidine kinase activity
CAB38_21145	COG0784	Response regulator, receiver
CAB38_21145	COG2205	protein histidine kinase activity
CAB38_21150	COG2733	membrane
CAB38_21175	COG2223	nitrite transmembrane transporter activity
CAB38_21180	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
CAB38_21185	COG0243	molybdopterin cofactor binding
CAB38_21195	COG0477	Major facilitator Superfamily
CAB38_21200	COG2703	oxygen carrier activity
CAB38_21210	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CAB38_21215	COG0174	glutamine synthetase
CAB38_21220	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
CAB38_21235	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
CAB38_21255	COG3842	ATPase activity
CAB38_21260	COG1176	ABC-type spermidine putrescine transport system, permease component I
CAB38_21265	COG1177	transmembrane transport
CAB38_21270	COG1012	belongs to the aldehyde dehydrogenase family
CAB38_21285	COG4535	Mg2 and Co2 transporter CorC
CAB38_21295	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
CAB38_21305	COG1702	phosphate starvation-inducible protein PhoH
CAB38_21310	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CAB38_21325	COG0741	lytic transglycosylase activity
CAB38_21335	COG0723	plastoquinol--plastocyanin reductase activity
CAB38_21340	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
CAB38_21345	COG2857	Cytochrome c1
CAB38_21350	COG0625	glutathione transferase activity
CAB38_21355	COG2969	positive regulation of protein catabolic process
CAB38_21375	COG1201	RNA secondary structure unwinding
CAB38_21380	COG2094	Belongs to the DNA glycosylase MPG family
CAB38_21385	COG0840	transmembrane signaling receptor activity
CAB38_21390	COG0835	chemotaxis
CAB38_21430	COG1262	PFAM Formylglycine-generating sulfatase enzyme
CAB38_21445	COG1570	exodeoxyribonuclease VII activity
CAB38_21450	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
CAB38_21455	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
CAB38_21455	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
CAB38_21460	COG0802	atpase or kinase
CAB38_21465	COG0860	N-Acetylmuramoyl-L-alanine amidase
CAB38_21470	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
CAB38_21495	COG1028	Short-chain dehydrogenase reductase Sdr
CAB38_21500	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CAB38_21590	COG4456	Virulence-associated protein
CAB38_21610	COG0668	transmembrane transport
CAB38_21620	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
CAB38_21635	COG1028	Short-chain dehydrogenase reductase Sdr
CAB38_21640	COG1183	phosphatidylcholine synthase activity
CAB38_21650	COG3243	poly(R)-hydroxyalkanoic acid synthase
CAB38_21665	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CAB38_21665	COG0723	plastoquinol--plastocyanin reductase activity
CAB38_21675	COG2183	response to ionizing radiation
CAB38_21680	COG0784	Response regulator, receiver
CAB38_21680	COG2205	protein histidine kinase activity
CAB38_21755	COG0800	Aldolase
CAB38_21760	COG0129	dihydroxy-acid dehydratase activity
CAB38_21765	COG0363	glucosamine-6-phosphate deaminase activity
CAB38_21770	COG0837	glucose binding
CAB38_21775	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CAB38_21800	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
CAB38_21820	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
CAB38_21830	COG4591	ABC-type transport system involved in lipoprotein release permease component
CAB38_21835	COG1136	(ABC) transporter
CAB38_21850	COG0811	peptide transport
CAB38_21860	COG1132	(ABC) transporter
CAB38_21865	COG1663	tetraacyldisaccharide 4'-kinase activity
CAB38_21870	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
CAB38_21875	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CAB38_21885	COG0322	excinuclease ABC activity
CAB38_21890	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CAB38_21955	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CAB38_21980	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
CAB38_22010	COG1530	ribonuclease E activity
CAB38_22020	COG3064	Membrane
CAB38_22025	COG0428	transporter
CAB38_22035	COG2154	pterin-4-alpha-carbinolamine dehydratase
CAB38_22040	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
CAB38_22040	COG0316	Belongs to the HesB IscA family
CAB38_22085	COG3209	COG3209 Rhs family protein
CAB38_22090	COG3209	COG3209 Rhs family protein
CAB38_22135	COG3250	beta-galactosidase activity
CAB38_22140	COG3867	Arabinogalactan endo-beta-1,4-galactanase
CAB38_22160	COG1960	acyl-CoA dehydrogenase activity
CAB38_22165	COG1024	Enoyl-CoA hydratase
CAB38_22205	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CAB38_22210	COG0481	GTPase activity
CAB38_22225	COG0571	ribonuclease III activity
CAB38_22230	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CAB38_22245	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CAB38_22255	COG2954	triphosphatase activity
CAB38_22260	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
CAB38_22265	COG3380	Catalyzes the oxidation of the 1,2-dihydro- and 1,6- dihydro- isomeric forms of beta-NAD(P) back to beta-NAD(P) . May serve to protect primary metabolism dehydrogenases from inhibition by the 1,2-dihydro- and 1,6-dihydro-beta-NAD(P) isomers
CAB38_22270	COG3046	protein related to deoxyribodipyrimidine photolyase
CAB38_22275	COG1472	Belongs to the glycosyl hydrolase 3 family
CAB38_22285	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
CAB38_22295	COG1278	Cold shock
CAB38_22300	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CAB38_22310	COG1201	RNA secondary structure unwinding
CAB38_22315	COG1793	dna ligase
CAB38_22325	COG1793	dna ligase
CAB38_22325	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
CAB38_22355	COG0183	Belongs to the thiolase family
CAB38_22380	COG1451	nucleotide metabolic process
CAB38_22385	COG5487	UPF0391 membrane protein
CAB38_22395	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CAB38_22415	COG1047	Peptidyl-prolyl cis-trans
CAB38_22425	COG2824	Alkylphosphonate utilization operon protein PhnA
CAB38_22440	COG2814	Major facilitator Superfamily
CAB38_22470	COG0392	lysyltransferase activity
CAB38_22470	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
CAB38_22480	COG0251	oxidation-reduction process
CAB38_22485	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CAB38_22500	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CAB38_22525	COG1595	DNA-templated transcription, initiation
CAB38_22545	COG2878	Part of a membrane complex involved in electron transport
CAB38_22555	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CAB38_22555	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CAB38_22570	COG1131	(ABC) transporter
CAB38_22575	COG0346	lactoylglutathione lyase activity
CAB38_22580	COG0833	amino acid
CAB38_22585	COG2040	homocysteine
CAB38_22595	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
CAB38_22615	COG1695	Transcriptional regulator
CAB38_22650	COG0825	malonyl-CoA metabolic process
CAB38_22660	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CAB38_22665	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CAB38_22670	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CAB38_22675	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CAB38_22680	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CAB38_22695	COG0750	zinc metalloprotease
CAB38_22700	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
CAB38_22705	COG0575	Belongs to the CDS family
CAB38_22710	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CAB38_22715	COG0233	cytoplasmic translational termination
CAB38_22720	COG0528	UMP kinase activity
CAB38_22730	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
CAB38_22735	COG0052	Belongs to the universal ribosomal protein uS2 family
CAB38_22775	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
CAB38_22785	COG1393	Belongs to the ArsC family
CAB38_22790	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CAB38_22795	COG0367	asparagine synthase
CAB38_22805	COG4774	siderophore transport
CAB38_22850	COG1566	PFAM secretion protein HlyD family protein
CAB38_22855	COG2814	Major facilitator Superfamily
CAB38_22910	COG0339	signal peptide processing
CAB38_22920	COG0386	Belongs to the glutathione peroxidase family
CAB38_22980	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
CAB38_22985	COG0084	hydrolase, TatD family'
CAB38_23000	COG1960	acyl-CoA dehydrogenase activity
CAB38_23020	COG0367	asparagine synthase
CAB38_23030	COG0305	Participates in initiation and elongation during chromosome replication
CAB38_23035	COG0415	Belongs to the DNA photolyase family
CAB38_23055	COG0583	DNA-binding transcription factor activity
CAB38_23095	COG3706	GGDEF domain
CAB38_23105	COG3706	GGDEF domain
CAB38_23135	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
CAB38_23150	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CAB38_23160	COG0497	DNA recombination
CAB38_23165	COG1420	regulation of RNA biosynthetic process
CAB38_23170	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
CAB38_23175	COG0443	Heat shock 70 kDa protein
CAB38_23180	COG0484	heat shock protein binding