locus-tag class description J151_00004 PF01527 Transposase J151_00006 PF02796 Helix-turn-helix domain of resolvase J151_00006 PF00239 Resolvase, N terminal domain J151_00018 PF07015 VirC1 protein J151_00022 PF03377 TAL effector repeat J151_00026 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system J151_00028 PF00239 Resolvase, N terminal domain J151_00028 PF02796 Helix-turn-helix domain of resolvase J151_00033 PF01526 Tn3 transposase DDE domain J151_00033 PF13700 Domain of unknown function (DUF4158) J151_00034 PF01526 Tn3 transposase DDE domain J151_00034 PF13700 Domain of unknown function (DUF4158) J151_00037 PF00239 Resolvase, N terminal domain J151_00037 PF02796 Helix-turn-helix domain of resolvase J151_00038 PF03377 TAL effector repeat J151_00042 PF13614 AAA domain J151_00050 PF13406 Transglycosylase SLT domain J151_00051 PF01526 Tn3 transposase DDE domain J151_00051 PF13700 Domain of unknown function (DUF4158) J151_00056 PF01527 Transposase J151_00057 PF03377 TAL effector repeat J151_00061 PF07015 VirC1 protein J151_00074 PF18272 single-stranded DNA binding TraI N-terminal subdomain J151_00074 PF07057 DNA helicase TraI J151_00074 PF18340 DNA relaxase TraI 2B/2B-like domain J151_00074 PF18272 single-stranded DNA binding TraI N-terminal subdomain J151_00074 PF07057 DNA helicase TraI J151_00074 PF08751 TrwC relaxase J151_00074 PF18340 DNA relaxase TraI 2B/2B-like domain J151_00074 PF08751 TrwC relaxase J151_00079 PF01464 Transglycosylase SLT domain J151_00080 PF00437 Type II/IV secretion system protein J151_00081 PF03743 Bacterial conjugation TrbI-like protein J151_00082 PF03524 Conjugal transfer protein J151_00094 PF01527 Transposase J151_00097 PF08535 KorB domain J151_00097 PF06613 KorB C-terminal beta-barrel domain J151_00097 PF02195 ParB-like nuclease domain J151_00098 PF13614 AAA domain J151_00103 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin J151_00104 PF00239 Resolvase, N terminal domain J151_00104 PF02796 Helix-turn-helix domain of resolvase J151_00105 PF13276 HTH-like domain J151_00105 PF00665 Integrase core domain J151_00105 PF13333 Integrase core domain J151_00107 PF03377 TAL effector repeat J151_00108 PF13700 Domain of unknown function (DUF4158) J151_00108 PF01526 Tn3 transposase DDE domain J151_00109 PF13700 Domain of unknown function (DUF4158) J151_00109 PF01526 Tn3 transposase DDE domain J151_00112 PF00239 Resolvase, N terminal domain J151_00112 PF02796 Helix-turn-helix domain of resolvase J151_00113 PF11638 DnaA N-terminal domain J151_00113 PF00308 Bacterial dnaA protein J151_00113 PF08299 Bacterial dnaA protein helix-turn-helix J151_00114 PF02768 DNA polymerase III beta subunit, C-terminal domain J151_00114 PF02767 DNA polymerase III beta subunit, central domain J151_00114 PF00712 DNA polymerase III beta subunit, N-terminal domain J151_00115 PF02463 RecF/RecN/SMC N terminal domain J151_00117 PF18053 DNA gyrase B subunit insert domain J151_00117 PF00986 DNA gyrase B subunit, carboxyl terminus J151_00117 PF00204 DNA gyrase B J151_00117 PF01751 Toprim domain J151_00117 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_00119 PF01435 Peptidase family M48 J151_00121 PF03544 Gram-negative bacterial TonB protein C-terminal J151_00122 PF01618 MotA/TolQ/ExbB proton channel family J151_00123 PF02472 Biopolymer transport protein ExbD/TolR J151_00124 PF02472 Biopolymer transport protein ExbD/TolR J151_00125 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ J151_00127 PF13091 PLD-like domain J151_00127 PF13396 Phospholipase_D-nuclease N-terminal J151_00130 PF04055 Radical SAM superfamily J151_00132 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) J151_00135 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J151_00135 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J151_00136 PF03572 Peptidase family S41 J151_00136 PF13180 PDZ domain J151_00137 PF01551 Peptidase family M23 J151_00139 PF04389 Peptidase family M28 J151_00141 PF00150 Cellulase (glycosyl hydrolase family 5) J151_00142 PF00150 Cellulase (glycosyl hydrolase family 5) J151_00143 PF00150 Cellulase (glycosyl hydrolase family 5) J151_00144 PF08240 Alcohol dehydrogenase GroES-like domain J151_00144 PF00107 Zinc-binding dehydrogenase J151_00145 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J151_00145 PF07992 Pyridine nucleotide-disulphide oxidoreductase J151_00146 PF00310 Glutamine amidotransferases class-II J151_00146 PF04898 Glutamate synthase central domain J151_00146 PF01493 GXGXG motif J151_00146 PF01645 Conserved region in glutamate synthase J151_00150 PF01804 Penicillin amidase J151_00152 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J151_00152 PF03466 LysR substrate binding domain J151_00155 PF02397 Bacterial sugar transferase J151_00156 PF02350 UDP-N-acetylglucosamine 2-epimerase J151_00158 PF03808 Glycosyl transferase WecB/TagA/CpsF family J151_00159 PF00534 Glycosyl transferases group 1 J151_00159 PF13439 Glycosyltransferase Family 4 J151_00163 PF00733 Asparagine synthase J151_00163 PF13537 Glutamine amidotransferase domain J151_00166 PF16363 GDP-mannose 4,6 dehydratase J151_00169 PF00005 ABC transporter J151_00169 PF00664 ABC transporter transmembrane region J151_00171 PF00733 Asparagine synthase J151_00171 PF13537 Glutamine amidotransferase domain J151_00176 PF00685 Sulfotransferase domain J151_00193 PF00271 Helicase conserved C-terminal domain J151_00193 PF09369 Domain of unknown function (DUF1998) J151_00193 PF00270 DEAD/DEAH box helicase J151_00194 PF03006 Haemolysin-III related J151_00197 PF00106 short chain dehydrogenase J151_00199 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J151_00199 PF03466 LysR substrate binding domain J151_00203 PF02525 Flavodoxin-like fold J151_00205 PF01527 Transposase J151_00214 PF05532 CsbD-like J151_00218 PF16485 Protealysin propeptide J151_00218 PF02868 Thermolysin metallopeptidase, alpha-helical domain J151_00218 PF01447 Thermolysin metallopeptidase, catalytic domain J151_00220 PF13344 Haloacid dehalogenase-like hydrolase J151_00220 PF00293 NUDIX domain J151_00223 PF00085 Thioredoxin J151_00224 PF08946 Osmosensory transporter coiled coil J151_00224 PF00083 Sugar (and other) transporter J151_00232 PF07726 ATPase family associated with various cellular activities (AAA) J151_00232 PF17863 AAA lid domain J151_00238 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain J151_00239 PF00155 Aminotransferase class I and II J151_00240 PF07715 TonB-dependent Receptor Plug Domain J151_00240 PF00593 TonB dependent receptor J151_00242 PF07883 Cupin domain J151_00243 PF00171 Aldehyde dehydrogenase family J151_00247 PF02735 Ku70/Ku80 beta-barrel domain J151_00248 PF01070 FMN-dependent dehydrogenase J151_00249 PF00144 Beta-lactamase J151_00250 PF07730 Histidine kinase J151_00251 PF00072 Response regulator receiver domain J151_00251 PF00196 Bacterial regulatory proteins, luxR family J151_00255 PF00486 Transcriptional regulatory protein, C terminal J151_00255 PF18500 CadC C-terminal domain 1 J151_00256 PF12241 Trans-2-enoyl-CoA reductase catalytic region J151_00256 PF07055 Enoyl reductase FAD binding domain J151_00256 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase J151_00258 PF00294 pfkB family carbohydrate kinase J151_00269 PF01527 Transposase J151_00270 PF13333 Integrase core domain J151_00270 PF13276 HTH-like domain J151_00270 PF00665 Integrase core domain J151_00271 PF00128 Alpha amylase, catalytic domain J151_00271 PF11896 Domain of unknown function (DUF3416) J151_00272 PF00128 Alpha amylase, catalytic domain J151_00272 PF16657 Maltogenic Amylase, C-terminal domain J151_00273 PF02806 Alpha amylase, C-terminal all-beta domain J151_00273 PF00128 Alpha amylase, catalytic domain J151_00273 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J151_00275 PF00248 Aldo/keto reductase family J151_00276 PF00135 Carboxylesterase family J151_00277 PF13472 GDSL-like Lipase/Acylhydrolase family J151_00277 PF07859 alpha/beta hydrolase fold J151_00279 PF03480 Bacterial extracellular solute-binding protein, family 7 J151_00281 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J151_00282 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J151_00282 PF04616 Glycosyl hydrolases family 43 J151_00283 PF00356 Bacterial regulatory proteins, lacI family J151_00284 PF04962 KduI/IolB family J151_00287 PF00657 GDSL-like Lipase/Acylhydrolase J151_00290 PF00351 Biopterin-dependent aromatic amino acid hydroxylase J151_00291 PF01037 Lrp/AsnC ligand binding domain J151_00292 PF07660 Secretin and TonB N terminus short domain J151_00292 PF07715 TonB-dependent Receptor Plug Domain J151_00292 PF00593 TonB dependent receptor J151_00293 PF01734 Patatin-like phospholipase J151_00295 PF00005 ABC transporter J151_00298 PF00005 ABC transporter J151_00299 PF00528 Binding-protein-dependent transport system inner membrane component J151_00301 PF12867 DinB superfamily J151_00301 PF03781 Sulfatase-modifying factor enzyme 1 J151_00304 PF01381 Helix-turn-helix J151_00308 PF10609 NUBPL iron-transfer P-loop NTPase J151_00308 PF01883 Iron-sulfur cluster assembly protein J151_00311 PF13091 PLD-like domain J151_00312 PF03061 Thioesterase superfamily J151_00318 PF00107 Zinc-binding dehydrogenase J151_00318 PF08240 Alcohol dehydrogenase GroES-like domain J151_00320 PF02673 Bacitracin resistance protein BacA J151_00321 PF03951 Glutamine synthetase, beta-Grasp domain J151_00321 PF00120 Glutamine synthetase, catalytic domain J151_00322 PF00543 Nitrogen regulatory protein P-II J151_00323 PF00909 Ammonium Transporter Family J151_00324 PF00989 PAS fold J151_00324 PF00512 His Kinase A (phospho-acceptor) domain J151_00324 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_00325 PF02954 Bacterial regulatory protein, Fis family J151_00325 PF00158 Sigma-54 interaction domain J151_00325 PF00072 Response regulator receiver domain J151_00326 PF00080 Copper/zinc superoxide dismutase (SODC) J151_00327 PF00080 Copper/zinc superoxide dismutase (SODC) J151_00328 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J151_00330 PF02803 Thiolase, C-terminal domain J151_00330 PF00108 Thiolase, N-terminal domain J151_00337 PF00581 Rhodanese-like domain J151_00338 PF02556 Preprotein translocase subunit SecB J151_00339 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus J151_00339 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus J151_00341 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J151_00341 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J151_00341 PF00205 Thiamine pyrophosphate enzyme, central domain J151_00342 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_00343 PF02954 Bacterial regulatory protein, Fis family J151_00343 PF00072 Response regulator receiver domain J151_00343 PF00158 Sigma-54 interaction domain J151_00346 PF07690 Major Facilitator Superfamily J151_00347 PF00588 SpoU rRNA Methylase family J151_00350 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J151_00350 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J151_00351 PF13784 Fic/DOC family N-terminal J151_00351 PF02661 Fic/DOC family J151_00352 PF00561 alpha/beta hydrolase fold J151_00353 PF03692 Putative zinc- or iron-chelating domain J151_00354 PF00501 AMP-binding enzyme J151_00356 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family J151_00358 PF01820 D-ala D-ala ligase N-terminus J151_00358 PF07478 D-ala D-ala ligase C-terminus J151_00360 PF03109 ABC1 family J151_00362 PF00849 RNA pseudouridylate synthase J151_00364 PF00472 RF-1 domain J151_00366 PF01112 Asparaginase J151_00367 PF01432 Peptidase family M3 J151_00368 PF12706 Beta-lactamase superfamily domain J151_00371 PF12833 Helix-turn-helix domain J151_00372 PF00999 Sodium/hydrogen exchanger family J151_00373 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J151_00373 PF03466 LysR substrate binding domain J151_00374 PF01274 Malate synthase J151_00375 PF00463 Isocitrate lyase family J151_00376 PF00990 Diguanylate cyclase, GGDEF domain J151_00381 PF00326 Prolyl oligopeptidase family J151_00382 PF00289 Biotin carboxylase, N-terminal domain J151_00382 PF00364 Biotin-requiring enzyme J151_00382 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J151_00382 PF02785 Biotin carboxylase C-terminal domain J151_00383 PF01039 Carboxyl transferase domain J151_00384 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J151_00384 PF02770 Acyl-CoA dehydrogenase, middle domain J151_00384 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J151_00395 PF02492 CobW/HypB/UreG, nucleotide-binding domain J151_00395 PF07683 Cobalamin synthesis protein cobW C-terminal domain J151_00399 PF03969 AFG1-like ATPase J151_00400 PF01047 MarR family J151_00401 PF02566 OsmC-like protein J151_00406 PF16884 N-terminal domain of oxidoreductase J151_00406 PF00107 Zinc-binding dehydrogenase J151_00409 PF00849 RNA pseudouridylate synthase J151_00410 PF00593 TonB dependent receptor J151_00412 PF00271 Helicase conserved C-terminal domain J151_00412 PF04408 Helicase associated domain (HA2) J151_00412 PF00270 DEAD/DEAH box helicase J151_00412 PF08482 ATP-dependent helicase C-terminal J151_00413 PF07308 Protein of unknown function (DUF1456) J151_00414 PF00576 HIUase/Transthyretin family J151_00415 PF13454 FAD-NAD(P)-binding J151_00416 PF01014 Uricase J151_00416 PF09349 OHCU decarboxylase J151_00419 PF00266 Aminotransferase class-V J151_00420 PF07687 Peptidase dimerisation domain J151_00420 PF01546 Peptidase family M20/M25/M40 J151_00421 PF03466 LysR substrate binding domain J151_00421 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J151_00422 PF07690 Major Facilitator Superfamily J151_00425 PF01425 Amidase J151_00426 PF01156 Inosine-uridine preferring nucleoside hydrolase J151_00428 PF00860 Permease family J151_00429 PF00111 2Fe-2S iron-sulfur cluster binding domain J151_00430 PF00355 Rieske [2Fe-2S] domain J151_00431 PF03466 LysR substrate binding domain J151_00431 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J151_00432 PF01026 TatD related DNase J151_00435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J151_00435 PF03466 LysR substrate binding domain J151_00436 PF07690 Major Facilitator Superfamily J151_00439 PF02146 Sir2 family J151_00440 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J151_00441 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J151_00441 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J151_00443 PF00551 Formyl transferase J151_00444 PF00072 Response regulator receiver domain J151_00444 PF00486 Transcriptional regulatory protein, C terminal J151_00445 PF00672 HAMP domain J151_00445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_00445 PF00512 His Kinase A (phospho-acceptor) domain J151_00446 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J151_00446 PF00529 HlyD membrane-fusion protein of T1SS J151_00447 PF00873 AcrB/AcrD/AcrF family J151_00448 PF02321 Outer membrane efflux protein J151_00450 PF02219 Methylenetetrahydrofolate reductase J151_00451 PF02677 Epoxyqueuosine reductase QueH J151_00452 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J151_00452 PF03466 LysR substrate binding domain J151_00453 PF03358 NADPH-dependent FMN reductase J151_00455 PF08267 Cobalamin-independent synthase, N-terminal domain J151_00455 PF01717 Cobalamin-independent synthase, Catalytic domain J151_00456 PF03812 2-keto-3-deoxygluconate permease J151_00458 PF05368 NmrA-like family J151_00459 PF01638 HxlR-like helix-turn-helix J151_00463 PF13276 HTH-like domain J151_00463 PF00665 Integrase core domain J151_00463 PF13333 Integrase core domain J151_00464 PF01527 Transposase J151_00465 PF13495 Phage integrase, N-terminal SAM-like domain J151_00465 PF00589 Phage integrase family J151_00466 PF00920 Dehydratase family J151_00469 PF00132 Bacterial transferase hexapeptide (six repeats) J151_00470 PF07690 Major Facilitator Superfamily J151_00471 PF01966 HD domain J151_00471 PF11871 Domain of unknown function (DUF3391) J151_00475 PF00171 Aldehyde dehydrogenase family J151_00477 PF01494 FAD binding domain J151_00480 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J151_00480 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J151_00481 PF00230 Major intrinsic protein J151_00482 PF01266 FAD dependent oxidoreductase J151_00482 PF16901 C-terminal domain of alpha-glycerophosphate oxidase J151_00483 PF08220 DeoR-like helix-turn-helix domain J151_00483 PF00455 DeoR C terminal sensor domain J151_00485 PF00355 Rieske [2Fe-2S] domain J151_00486 PF01144 Coenzyme A transferase J151_00487 PF01144 Coenzyme A transferase J151_00488 PF02803 Thiolase, C-terminal domain J151_00488 PF00108 Thiolase, N-terminal domain J151_00489 PF00775 Dioxygenase J151_00489 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal J151_00491 PF10397 Adenylosuccinate lyase C-terminus J151_00491 PF00206 Lyase J151_00492 PF12146 Serine aminopeptidase, S33 J151_00493 PF02627 Carboxymuconolactone decarboxylase family J151_00495 PF01614 Bacterial transcriptional regulator J151_00495 PF09339 IclR helix-turn-helix domain J151_00497 PF07859 alpha/beta hydrolase fold J151_00498 PF10677 Protein of unknown function (DUF2490) J151_00499 PF01134 Glucose inhibited division protein A J151_00499 PF13932 GidA associated domain J151_00501 PF00291 Pyridoxal-phosphate dependent enzyme J151_00505 PF13649 Methyltransferase domain J151_00507 PF12697 Alpha/beta hydrolase family J151_00509 PF00155 Aminotransferase class I and II J151_00510 PF04055 Radical SAM superfamily J151_00510 PF06968 Biotin and Thiamin Synthesis associated domain J151_00512 PF01040 UbiA prenyltransferase family J151_00516 PF05819 NolX protein J151_00524 PF01313 Bacterial export proteins, family 3 J151_00525 PF00813 FliP family J151_00528 PF00771 FHIPEP family J151_00529 PF01312 FlhB HrpN YscU SpaS Family J151_00532 PF01514 Secretory protein of YscJ/FliF family J151_00535 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J151_00535 PF02874 ATP synthase alpha/beta family, beta-barrel domain J151_00535 PF18269 T3SS EscN ATPase C-terminal domain J151_00537 PF01311 Bacterial export proteins, family 1 J151_00540 PF01464 Transglycosylase SLT domain J151_00543 PF12794 Mechanosensitive ion channel inner membrane domain 1 J151_00543 PF00924 Mechanosensitive ion channel J151_00543 PF12795 Mechanosensitive ion channel porin domain J151_00544 PF00884 Sulfatase J151_00545 PF03109 ABC1 family J151_00546 PF05661 Protein of unknown function (DUF808) J151_00547 PF00072 Response regulator receiver domain J151_00547 PF00990 Diguanylate cyclase, GGDEF domain J151_00548 PF08323 Starch synthase catalytic domain J151_00548 PF00534 Glycosyl transferases group 1 J151_00549 PF02806 Alpha amylase, C-terminal all-beta domain J151_00549 PF00128 Alpha amylase, catalytic domain J151_00549 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J151_00550 PF00128 Alpha amylase, catalytic domain J151_00550 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J151_00550 PF11941 Domain of unknown function (DUF3459) J151_00551 PF02446 4-alpha-glucanotransferase J151_00552 PF00128 Alpha amylase, catalytic domain J151_00554 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J151_00554 PF00128 Alpha amylase, catalytic domain J151_00555 PF13460 NAD(P)H-binding J151_00558 PF06903 VirK protein J151_00559 PF02321 Outer membrane efflux protein J151_00562 PF00873 AcrB/AcrD/AcrF family J151_00565 PF00270 DEAD/DEAH box helicase J151_00565 PF00271 Helicase conserved C-terminal domain J151_00567 PF02817 e3 binding domain J151_00567 PF00364 Biotin-requiring enzyme J151_00567 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J151_00569 PF02780 Transketolase, C-terminal domain J151_00569 PF02779 Transketolase, pyrimidine binding domain J151_00570 PF00676 Dehydrogenase E1 component J151_00572 PF03301 Tryptophan 2,3-dioxygenase J151_00573 PF00854 POT family J151_00575 PF01047 MarR family J151_00576 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J151_00577 PF04209 homogentisate 1,2-dioxygenase J151_00580 PF03334 Na+/H+ antiporter subunit J151_00581 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) J151_00583 PF00361 Proton-conducting membrane transporter J151_00584 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J151_00585 PF13244 Domain of unknown function (DUF4040) J151_00585 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter J151_00585 PF00361 Proton-conducting membrane transporter J151_00585 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J151_00588 PF01483 Proprotein convertase P-domain J151_00588 PF07504 Fungalysin/Thermolysin Propeptide Motif J151_00588 PF02868 Thermolysin metallopeptidase, alpha-helical domain J151_00588 PF01447 Thermolysin metallopeptidase, catalytic domain J151_00589 PF00182 Chitinase class I J151_00593 PF01259 SAICAR synthetase J151_00594 PF00226 DnaJ domain J151_00594 PF05099 Tellurite resistance protein TerB J151_00596 PF00834 Ribulose-phosphate 3 epimerase family J151_00597 PF00583 Acetyltransferase (GNAT) family J151_00598 PF00781 Diacylglycerol kinase catalytic domain J151_00599 PF04715 Anthranilate synthase component I, N terminal region J151_00599 PF00425 chorismate binding enzyme J151_00601 PF00117 Glutamine amidotransferase class-I J151_00603 PF00591 Glycosyl transferase family, a/b domain J151_00603 PF02885 Glycosyl transferase family, helical bundle domain J151_00604 PF00218 Indole-3-glycerol phosphate synthase J151_00606 PF00325 Bacterial regulatory proteins, crp family J151_00606 PF00027 Cyclic nucleotide-binding domain J151_00607 PF02675 S-adenosylmethionine decarboxylase J151_00608 PF00893 Small Multidrug Resistance protein J151_00609 PF03232 Ubiquinone biosynthesis protein COQ7 J151_00610 PF00572 Ribosomal protein L13 J151_00611 PF00380 Ribosomal protein S9/S16 J151_00614 PF00293 NUDIX domain J151_00615 PF00210 Ferritin-like domain J151_00616 PF00512 His Kinase A (phospho-acceptor) domain J151_00616 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J151_00616 PF00672 HAMP domain J151_00616 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_00616 PF00072 Response regulator receiver domain J151_00616 PF01627 Hpt domain J151_00617 PF00486 Transcriptional regulatory protein, C terminal J151_00617 PF00072 Response regulator receiver domain J151_00621 PF01521 Iron-sulphur cluster biosynthesis J151_00624 PF09297 NADH pyrophosphatase zinc ribbon domain J151_00624 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain J151_00624 PF00293 NUDIX domain J151_00625 PF03186 CobD/Cbib protein J151_00625 PF17113 Regulatory signalling modulator protein AmpE J151_00628 PF07690 Major Facilitator Superfamily J151_00629 PF03466 LysR substrate binding domain J151_00629 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J151_00630 PF07690 Major Facilitator Superfamily J151_00631 PF12805 FUSC-like inner membrane protein yccS J151_00632 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain J151_00632 PF02843 Phosphoribosylglycinamide synthetase, C domain J151_00632 PF02844 Phosphoribosylglycinamide synthetase, N domain J151_00634 PF01808 AICARFT/IMPCHase bienzyme J151_00634 PF02142 MGS-like domain J151_00635 PF01066 CDP-alcohol phosphatidyltransferase J151_00636 PF12146 Serine aminopeptidase, S33 J151_00636 PF12147 Putative methyltransferase J151_00637 PF00782 Dual specificity phosphatase, catalytic domain J151_00643 PF02954 Bacterial regulatory protein, Fis family J151_00646 PF01381 Helix-turn-helix J151_00651 PF00289 Biotin carboxylase, N-terminal domain J151_00651 PF02785 Biotin carboxylase C-terminal domain J151_00651 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J151_00653 PF00364 Biotin-requiring enzyme J151_00654 PF01220 Dehydroquinase class II J151_00655 PF02683 Cytochrome C biogenesis protein transmembrane region J151_00655 PF11412 Disulphide bond corrector protein DsbC J151_00656 PF03091 CutA1 divalent ion tolerance protein J151_00659 PF01852 START domain J151_00661 PF00106 short chain dehydrogenase J151_00662 PF04231 Endonuclease I J151_00663 PF00166 Chaperonin 10 Kd subunit J151_00664 PF00118 TCP-1/cpn60 chaperonin family J151_00666 PF07715 TonB-dependent Receptor Plug Domain J151_00666 PF00593 TonB dependent receptor J151_00667 PF00793 DAHP synthetase I family J151_00670 PF08450 SMP-30/Gluconolactonase/LRE-like region J151_00672 PF03710 Glutamate-ammonia ligase adenylyltransferase J151_00672 PF08335 GlnD PII-uridylyltransferase J151_00673 PF02592 Putative vitamin uptake transporter J151_00676 PF00881 Nitroreductase family J151_00677 PF04264 YceI-like domain J151_00681 PF16957 Malonate decarboxylase, alpha subunit, transporter J151_00682 PF06857 Malonate decarboxylase delta subunit (MdcD) J151_00683 PF01039 Carboxyl transferase domain J151_00685 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG J151_00686 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase J151_00688 PF00698 Acyl transferase domain J151_00690 PF00392 Bacterial regulatory proteins, gntR family J151_00690 PF07729 FCD domain J151_00691 PF13419 Haloacid dehalogenase-like hydrolase J151_00697 PF07745 Glycosyl hydrolase family 53 J151_00698 PF00456 Transketolase, thiamine diphosphate binding domain J151_00698 PF17831 Pyruvate dehydrogenase E1 component middle domain J151_00699 PF00665 Integrase core domain J151_00699 PF13276 HTH-like domain J151_00699 PF13333 Integrase core domain J151_00700 PF01527 Transposase J151_00701 PF00106 short chain dehydrogenase J151_00704 PF00106 short chain dehydrogenase J151_00706 PF13409 Glutathione S-transferase, N-terminal domain J151_00711 PF03176 MMPL family J151_00711 PF12823 Domain of unknown function (DUF3817) J151_00712 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J151_00712 PF00326 Prolyl oligopeptidase family J151_00713 PF07759 Protein of unknown function (DUF1615) J151_00714 PF00990 Diguanylate cyclase, GGDEF domain J151_00714 PF05230 MASE2 domain J151_00718 PF00892 EamA-like transporter family J151_00719 PF00497 Bacterial extracellular solute-binding proteins, family 3 J151_00722 PF00324 Amino acid permease J151_00724 PF01544 CorA-like Mg2+ transporter protein J151_00726 PF01204 Trehalase J151_00728 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J151_00728 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J151_00733 PF00563 EAL domain J151_00733 PF08447 PAS fold J151_00733 PF08448 PAS fold J151_00733 PF00990 Diguanylate cyclase, GGDEF domain J151_00734 PF02203 Tar ligand binding domain homologue J151_00734 PF00672 HAMP domain J151_00734 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J151_00735 PF00150 Cellulase (glycosyl hydrolase family 5) J151_00735 PF00553 Cellulose binding domain J151_00736 PF01740 STAS domain J151_00736 PF00916 Sulfate permease family J151_00737 PF08448 PAS fold J151_00737 PF00990 Diguanylate cyclase, GGDEF domain J151_00740 PF13632 Glycosyl transferase family group 2 J151_00742 PF07694 5TMR of 5TMR-LYT J151_00742 PF06580 Histidine kinase J151_00743 PF04397 LytTr DNA-binding domain J151_00743 PF00072 Response regulator receiver domain J151_00744 PF03900 Porphobilinogen deaminase, C-terminal domain J151_00744 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain J151_00749 PF00326 Prolyl oligopeptidase family J151_00749 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J151_00751 PF00155 Aminotransferase class I and II J151_00752 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J151_00752 PF00326 Prolyl oligopeptidase family J151_00753 PF04304 Protein of unknown function (DUF454) J151_00755 PF01678 Diaminopimelate epimerase J151_00757 PF02899 Phage integrase, N-terminal SAM-like domain J151_00757 PF00589 Phage integrase family J151_00758 PF00227 Proteasome subunit J151_00759 PF00004 ATPase family associated with various cellular activities (AAA) J151_00759 PF10431 C-terminal, D2-small domain, of ClpB protein J151_00759 PF07724 AAA domain (Cdc48 subfamily) J151_00761 PF13673 Acetyltransferase (GNAT) domain J151_00762 PF13533 Biotin-lipoyl like J151_00764 PF01209 ubiE/COQ5 methyltransferase family J151_00765 PF00563 EAL domain J151_00765 PF03707 Bacterial signalling protein N terminal repeat J151_00765 PF00990 Diguanylate cyclase, GGDEF domain J151_00766 PF01433 Peptidase family M1 domain J151_00766 PF11838 ERAP1-like C-terminal domain J151_00769 PF13360 PQQ-like domain J151_00770 PF00497 Bacterial extracellular solute-binding proteins, family 3 J151_00773 PF08240 Alcohol dehydrogenase GroES-like domain J151_00773 PF00107 Zinc-binding dehydrogenase J151_00775 PF00158 Sigma-54 interaction domain J151_00775 PF02954 Bacterial regulatory protein, Fis family J151_00775 PF01590 GAF domain J151_00776 PF00294 pfkB family carbohydrate kinase J151_00778 PF04085 rod shape-determining protein MreC J151_00780 PF03717 Penicillin-binding Protein dimerisation domain J151_00780 PF00905 Penicillin binding protein transpeptidase domain J151_00781 PF01098 Cell cycle protein J151_00782 PF00295 Glycosyl hydrolases family 28 J151_00783 PF13406 Transglycosylase SLT domain J151_00784 PF05036 Sporulation related domain J151_00784 PF03330 Lytic transglycolase J151_00785 PF00768 D-alanyl-D-alanine carboxypeptidase J151_00785 PF07943 Penicillin-binding protein 5, C-terminal domain J151_00787 PF04359 Protein of unknown function (DUF493) J151_00788 PF03099 Biotin/lipoate A/B protein ligase family J151_00789 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family J151_00789 PF04055 Radical SAM superfamily J151_00790 PF17804 Tail specific protease N-terminal domain J151_00790 PF00595 PDZ domain J151_00790 PF11818 C-terminal domain of tail specific protease (DUF3340) J151_00790 PF03572 Peptidase family S41 J151_00792 PF03466 LysR substrate binding domain J151_00792 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J151_00794 PF01467 Cytidylyltransferase-like J151_00794 PF00293 NUDIX domain J151_00801 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain J151_00801 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J151_00802 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J151_00802 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J151_00803 PF04972 BON domain J151_00804 PF00360 Phytochrome region J151_00804 PF08446 PAS fold J151_00804 PF00512 His Kinase A (phospho-acceptor) domain J151_00804 PF01590 GAF domain J151_00804 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_00805 PF00072 Response regulator receiver domain J151_00806 PF00512 His Kinase A (phospho-acceptor) domain J151_00806 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_00807 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J151_00808 PF00106 short chain dehydrogenase J151_00816 PF00263 Bacterial type II and III secretion system protein J151_00816 PF03958 Bacterial type II/III secretion system short domain J151_00817 PF00437 Type II/IV secretion system protein J151_00818 PF00482 Type II secretion system (T2SS), protein F J151_00819 PF07963 Prokaryotic N-terminal methylation motif J151_00819 PF08334 Type II secretion system (T2SS), protein G J151_00820 PF12019 Type II transport protein GspH J151_00820 PF07963 Prokaryotic N-terminal methylation motif J151_00822 PF07963 Prokaryotic N-terminal methylation motif J151_00822 PF11612 Type II secretion system (T2SS), protein J J151_00823 PF03934 Type II secretion system (T2SS), protein K J151_00829 PF02837 Glycosyl hydrolases family 2, sugar binding domain J151_00829 PF00703 Glycosyl hydrolases family 2 J151_00829 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J151_00829 PF16355 Domain of unknown function (DUF4982) J151_00829 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 J151_00834 PF07690 Major Facilitator Superfamily J151_00835 PF00356 Bacterial regulatory proteins, lacI family J151_00836 PF01380 SIS domain J151_00837 PF01979 Amidohydrolase family J151_00839 PF01966 HD domain J151_00839 PF12627 Probable RNA and SrmB- binding site of polymerase A J151_00839 PF01743 Poly A polymerase head domain J151_00840 PF00732 GMC oxidoreductase J151_00840 PF05199 GMC oxidoreductase J151_00841 PF00171 Aldehyde dehydrogenase family J151_00842 PF02028 BCCT, betaine/carnitine/choline family transporter J151_00844 PF01323 DSBA-like thioredoxin domain J151_00847 PF00034 Cytochrome c J151_00848 PF01926 50S ribosome-binding GTPase J151_00849 PF10996 Beta-Casp domain J151_00849 PF00753 Metallo-beta-lactamase superfamily J151_00849 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain J151_00851 PF04107 Glutamate-cysteine ligase family 2(GCS2) J151_00852 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_00852 PF00672 HAMP domain J151_00852 PF00512 His Kinase A (phospho-acceptor) domain J151_00853 PF00072 Response regulator receiver domain J151_00853 PF00486 Transcriptional regulatory protein, C terminal J151_00856 PF02583 Metal-sensitive transcriptional repressor J151_00857 PF08240 Alcohol dehydrogenase GroES-like domain J151_00857 PF00107 Zinc-binding dehydrogenase J151_00858 PF04828 Glutathione-dependent formaldehyde-activating enzyme J151_00859 PF00756 Putative esterase J151_00860 PF00155 Aminotransferase class I and II J151_00860 PF00392 Bacterial regulatory proteins, gntR family J151_00861 PF02567 Phenazine biosynthesis-like protein J151_00862 PF00892 EamA-like transporter family J151_00864 PF12848 ABC transporter J151_00864 PF00005 ABC transporter J151_00866 PF00464 Serine hydroxymethyltransferase J151_00867 PF03477 ATP cone domain J151_00869 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J151_00869 PF01872 RibD C-terminal domain J151_00872 PF00677 Lumazine binding domain J151_00873 PF00925 GTP cyclohydrolase II J151_00873 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J151_00874 PF00885 6,7-dimethyl-8-ribityllumazine synthase J151_00875 PF01029 NusB family J151_00876 PF00586 AIR synthase related protein, N-terminal domain J151_00876 PF02769 AIR synthase related protein, C-terminal domain J151_00880 PF03814 Potassium-transporting ATPase A subunit J151_00882 PF02669 K+-transporting ATPase, c chain J151_00883 PF13493 Domain of unknown function (DUF4118) J151_00883 PF13492 GAF domain J151_00883 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_00883 PF00512 His Kinase A (phospho-acceptor) domain J151_00883 PF02702 Osmosensitive K+ channel His kinase sensor domain J151_00884 PF00072 Response regulator receiver domain J151_00884 PF00486 Transcriptional regulatory protein, C terminal J151_00887 PF01565 FAD binding domain J151_00887 PF02913 FAD linked oxidases, C-terminal domain J151_00888 PF04307 LexA-binding, inner membrane-associated putative hydrolase J151_00889 PF02021 Uncharacterised protein family UPF0102 J151_00891 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J151_00896 PF02381 MraZ protein, putative antitoxin-like J151_00897 PF01795 MraW methylase family J151_00898 PF04999 Cell division protein FtsL J151_00899 PF03717 Penicillin-binding Protein dimerisation domain J151_00899 PF00905 Penicillin binding protein transpeptidase domain J151_00900 PF08245 Mur ligase middle domain J151_00900 PF02875 Mur ligase family, glutamate ligase domain J151_00900 PF01225 Mur ligase family, catalytic domain J151_00901 PF02875 Mur ligase family, glutamate ligase domain J151_00901 PF01225 Mur ligase family, catalytic domain J151_00901 PF08245 Mur ligase middle domain J151_00902 PF00953 Glycosyl transferase family 4 J151_00903 PF01098 Cell cycle protein J151_00904 PF04101 Glycosyltransferase family 28 C-terminal domain J151_00904 PF03033 Glycosyltransferase family 28 N-terminal domain J151_00905 PF08245 Mur ligase middle domain J151_00905 PF02875 Mur ligase family, glutamate ligase domain J151_00905 PF01225 Mur ligase family, catalytic domain J151_00906 PF01820 D-ala D-ala ligase N-terminus J151_00906 PF07478 D-ala D-ala ligase C-terminus J151_00907 PF03799 Cell division protein FtsQ J151_00907 PF08478 POTRA domain, FtsQ-type J151_00908 PF02491 SHS2 domain inserted in FTSA J151_00909 PF00091 Tubulin/FtsZ family, GTPase domain J151_00909 PF12327 FtsZ family, C-terminal domain J151_00910 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase J151_00912 PF01551 Peptidase family M23 J151_00912 PF08525 Opacity-associated protein A N-terminal motif J151_00912 PF01476 LysM domain J151_00913 PF02810 SEC-C motif J151_00913 PF01043 SecA preprotein cross-linking domain J151_00913 PF07516 SecA Wing and Scaffold domain J151_00913 PF07517 SecA DEAD-like domain J151_00914 PF00293 NUDIX domain J151_00916 PF02219 Methylenetetrahydrofolate reductase J151_00919 PF08240 Alcohol dehydrogenase GroES-like domain J151_00919 PF00107 Zinc-binding dehydrogenase J151_00919 PF16197 Ketoacyl-synthetase C-terminal extension J151_00919 PF00109 Beta-ketoacyl synthase, N-terminal domain J151_00919 PF08659 KR domain J151_00919 PF00550 Phosphopantetheine attachment site J151_00919 PF00698 Acyl transferase domain J151_00919 PF14765 Polyketide synthase dehydratase J151_00919 PF02801 Beta-ketoacyl synthase, C-terminal domain J151_00920 PF09286 Pro-kumamolisin, activation domain J151_00920 PF00082 Subtilase family J151_00922 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J151_00923 PF00128 Alpha amylase, catalytic domain J151_00929 PF13649 Methyltransferase domain J151_00930 PF05221 S-adenosyl-L-homocysteine hydrolase J151_00930 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain J151_00933 PF00311 Phosphoenolpyruvate carboxylase J151_00938 PF00328 Histidine phosphatase superfamily (branch 2) J151_00939 PF02773 S-adenosylmethionine synthetase, C-terminal domain J151_00939 PF02772 S-adenosylmethionine synthetase, central domain J151_00939 PF00438 S-adenosylmethionine synthetase, N-terminal domain J151_00941 PF13649 Methyltransferase domain J151_00942 PF01207 Dihydrouridine synthase (Dus) J151_00945 PF00294 pfkB family carbohydrate kinase J151_00946 PF01773 Na+ dependent nucleoside transporter N-terminus J151_00946 PF07662 Na+ dependent nucleoside transporter C-terminus J151_00946 PF07670 Nucleoside recognition J151_00947 PF00248 Aldo/keto reductase family J151_00949 PF00593 TonB dependent receptor J151_00949 PF07715 TonB-dependent Receptor Plug Domain J151_00954 PF00528 Binding-protein-dependent transport system inner membrane component J151_00955 PF00005 ABC transporter J151_00957 PF02668 Taurine catabolism dioxygenase TauD, TfdA family J151_00959 PF00005 ABC transporter J151_00960 PF13472 GDSL-like Lipase/Acylhydrolase family J151_00961 PF00486 Transcriptional regulatory protein, C terminal J151_00961 PF00072 Response regulator receiver domain J151_00962 PF08521 Two-component sensor kinase N-terminal J151_00962 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_00962 PF00512 His Kinase A (phospho-acceptor) domain J151_00964 PF01219 Prokaryotic diacylglycerol kinase J151_00968 PF01790 Prolipoprotein diacylglyceryl transferase J151_00969 PF00303 Thymidylate synthase J151_00971 PF00186 Dihydrofolate reductase J151_00972 PF00158 Sigma-54 interaction domain J151_00973 PF08028 Acyl-CoA dehydrogenase, C-terminal domain J151_00973 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J151_00974 PF00005 ABC transporter J151_00975 PF00528 Binding-protein-dependent transport system inner membrane component J151_00977 PF00296 Luciferase-like monooxygenase J151_00978 PF03358 NADPH-dependent FMN reductase J151_00982 PF00296 Luciferase-like monooxygenase J151_00983 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J151_00984 PF00528 Binding-protein-dependent transport system inner membrane component J151_00987 PF00005 ABC transporter J151_00987 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J151_00988 PF00149 Calcineurin-like phosphoesterase J151_00989 PF04379 ApaG domain J151_00990 PF00398 Ribosomal RNA adenine dimethylase J151_00991 PF04166 Pyridoxal phosphate biosynthetic protein PdxA J151_00992 PF09312 SurA N-terminal domain J151_00992 PF00639 PPIC-type PPIASE domain J151_00993 PF03968 OstA-like protein J151_00993 PF04453 LPS transport system D J151_00996 PF00850 Histone deacetylase domain J151_00997 PF01923 Cobalamin adenosyltransferase J151_00999 PF01494 FAD binding domain J151_01000 PF01494 FAD binding domain J151_01004 PF07729 FCD domain J151_01004 PF00392 Bacterial regulatory proteins, gntR family J151_01005 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J151_01006 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit J151_01006 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J151_01007 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J151_01007 PF03466 LysR substrate binding domain J151_01008 PF13193 AMP-binding enzyme C-terminal domain J151_01008 PF00501 AMP-binding enzyme J151_01009 PF00171 Aldehyde dehydrogenase family J151_01010 PF00378 Enoyl-CoA hydratase/isomerase J151_01014 PF08450 SMP-30/Gluconolactonase/LRE-like region J151_01015 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J151_01015 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J151_01016 PF18125 RlmM ferredoxin-like domain J151_01016 PF01728 FtsJ-like methyltransferase J151_01019 PF00892 EamA-like transporter family J151_01020 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain J151_01020 PF00749 tRNA synthetases class I (E and Q), catalytic domain J151_01023 PF00072 Response regulator receiver domain J151_01023 PF00990 Diguanylate cyclase, GGDEF domain J151_01024 PF00512 His Kinase A (phospho-acceptor) domain J151_01024 PF01627 Hpt domain J151_01024 PF00072 Response regulator receiver domain J151_01024 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J151_01024 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_01024 PF00672 HAMP domain J151_01025 PF00072 Response regulator receiver domain J151_01025 PF00196 Bacterial regulatory proteins, luxR family J151_01027 PF01625 Peptide methionine sulfoxide reductase J151_01029 PF00923 Transaldolase/Fructose-6-phosphate aldolase J151_01030 PF14760 Rnk N-terminus J151_01030 PF01272 Transcription elongation factor, GreA/GreB, C-term J151_01031 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J151_01031 PF03466 LysR substrate binding domain J151_01032 PF13192 Thioredoxin domain J151_01032 PF07992 Pyridine nucleotide-disulphide oxidoreductase J151_01033 PF00578 AhpC/TSA family J151_01033 PF10417 C-terminal domain of 1-Cys peroxiredoxin J151_01034 PF17827 PrmC N-terminal domain J151_01034 PF05175 Methyltransferase small domain J151_01035 PF00561 alpha/beta hydrolase fold J151_01037 PF00293 NUDIX domain J151_01038 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J151_01038 PF01612 3'-5' exonuclease J151_01038 PF00476 DNA polymerase family A J151_01038 PF01367 5'-3' exonuclease, C-terminal SAM fold J151_01044 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch J151_01044 PF05222 Alanine dehydrogenase/PNT, N-terminal domain J151_01044 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J151_01049 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch J151_01050 PF02233 NAD(P) transhydrogenase beta subunit J151_01053 PF01063 Amino-transferase class IV J151_01054 PF00082 Subtilase family J151_01054 PF04151 Bacterial pre-peptidase C-terminal domain J151_01055 PF00082 Subtilase family J151_01055 PF04151 Bacterial pre-peptidase C-terminal domain J151_01056 PF00082 Subtilase family J151_01056 PF04151 Bacterial pre-peptidase C-terminal domain J151_01057 PF04073 Aminoacyl-tRNA editing domain J151_01059 PF17189 Glycosyl hydrolase family 30 beta sandwich domain J151_01059 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain J151_01062 PF03358 NADPH-dependent FMN reductase J151_01063 PF03631 Virulence factor BrkB J151_01064 PF08534 Redoxin J151_01065 PF00708 Acylphosphatase J151_01067 PF03976 Polyphosphate kinase 2 (PPK2) J151_01068 PF00994 Probable molybdopterin binding domain J151_01070 PF00472 RF-1 domain J151_01070 PF03462 PCRF domain J151_01071 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain J151_01071 PF01488 Shikimate / quinate 5-dehydrogenase J151_01071 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain J151_01073 PF03550 Outer membrane lipoprotein LolB J151_01074 PF08544 GHMP kinases C terminal J151_01074 PF00288 GHMP kinases N terminal domain J151_01076 PF14572 Phosphoribosyl synthetase-associated domain J151_01076 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase J151_01077 PF01386 Ribosomal L25p family J151_01077 PF14693 Ribosomal protein TL5, C-terminal domain J151_01078 PF01195 Peptidyl-tRNA hydrolase J151_01079 PF06071 Protein of unknown function (DUF933) J151_01079 PF01926 50S ribosome-binding GTPase J151_01083 PF03143 Elongation factor Tu C-terminal domain J151_01083 PF03144 Elongation factor Tu domain 2 J151_01083 PF00009 Elongation factor Tu GTP binding domain J151_01085 PF00584 SecE/Sec61-gamma subunits of protein translocation complex J151_01086 PF00467 KOW motif J151_01086 PF02357 Transcription termination factor nusG J151_01087 PF03946 Ribosomal protein L11, N-terminal domain J151_01087 PF00298 Ribosomal protein L11, RNA binding domain J151_01088 PF00687 Ribosomal protein L1p/L10e family J151_01089 PF00466 Ribosomal protein L10 J151_01090 PF00542 Ribosomal protein L7/L12 C-terminal domain J151_01090 PF16320 Ribosomal protein L7/L12 dimerisation domain J151_01092 PF04560 RNA polymerase Rpb2, domain 7 J151_01092 PF00562 RNA polymerase Rpb2, domain 6 J151_01092 PF04563 RNA polymerase beta subunit J151_01092 PF04561 RNA polymerase Rpb2, domain 2 J151_01092 PF04565 RNA polymerase Rpb2, domain 3 J151_01092 PF10385 RNA polymerase beta subunit external 1 domain J151_01093 PF04998 RNA polymerase Rpb1, domain 5 J151_01093 PF04997 RNA polymerase Rpb1, domain 1 J151_01093 PF05000 RNA polymerase Rpb1, domain 4 J151_01093 PF04983 RNA polymerase Rpb1, domain 3 J151_01093 PF00623 RNA polymerase Rpb1, domain 2 J151_01094 PF00164 Ribosomal protein S12/S23 J151_01095 PF00177 Ribosomal protein S7p/S5e J151_01096 PF03764 Elongation factor G, domain IV J151_01096 PF03144 Elongation factor Tu domain 2 J151_01096 PF00009 Elongation factor Tu GTP binding domain J151_01096 PF00679 Elongation factor G C-terminus J151_01096 PF14492 Elongation Factor G, domain II J151_01097 PF03143 Elongation factor Tu C-terminal domain J151_01097 PF03144 Elongation factor Tu domain 2 J151_01097 PF00009 Elongation factor Tu GTP binding domain J151_01098 PF00338 Ribosomal protein S10p/S20e J151_01099 PF00297 Ribosomal protein L3 J151_01100 PF00573 Ribosomal protein L4/L1 family J151_01101 PF00276 Ribosomal protein L23 J151_01102 PF03947 Ribosomal Proteins L2, C-terminal domain J151_01102 PF00181 Ribosomal Proteins L2, RNA binding domain J151_01103 PF00203 Ribosomal protein S19 J151_01104 PF00237 Ribosomal protein L22p/L17e J151_01105 PF00189 Ribosomal protein S3, C-terminal domain J151_01105 PF07650 KH domain J151_01106 PF00252 Ribosomal protein L16p/L10e J151_01107 PF00831 Ribosomal L29 protein J151_01108 PF00366 Ribosomal protein S17 J151_01109 PF00238 Ribosomal protein L14p/L23e J151_01110 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 J151_01110 PF00467 KOW motif J151_01111 PF00673 ribosomal L5P family C-terminus J151_01111 PF00281 Ribosomal protein L5 J151_01112 PF00253 Ribosomal protein S14p/S29e J151_01113 PF00410 Ribosomal protein S8 J151_01114 PF00347 Ribosomal protein L6 J151_01115 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast J151_01116 PF03719 Ribosomal protein S5, C-terminal domain J151_01116 PF00333 Ribosomal protein S5, N-terminal domain J151_01117 PF00327 Ribosomal protein L30p/L7e J151_01118 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A J151_01119 PF00344 SecY translocase J151_01120 PF00416 Ribosomal protein S13/S18 J151_01121 PF00411 Ribosomal protein S11 J151_01122 PF00163 Ribosomal protein S4/S9 N-terminal domain J151_01122 PF01479 S4 domain J151_01123 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain J151_01123 PF01000 RNA polymerase Rpb3/RpoA insert domain J151_01123 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain J151_01124 PF01196 Ribosomal protein L17 J151_01125 PF02600 Disulfide bond formation protein DsbB J151_01127 PF01474 Class-II DAHP synthetase family J151_01129 PF01425 Amidase J151_01132 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J151_01133 PF00056 lactate/malate dehydrogenase, NAD binding domain J151_01133 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain J151_01134 PF00043 Glutathione S-transferase, C-terminal domain J151_01134 PF02798 Glutathione S-transferase, N-terminal domain J151_01136 PF07992 Pyridine nucleotide-disulphide oxidoreductase J151_01136 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J151_01137 PF00107 Zinc-binding dehydrogenase J151_01137 PF08240 Alcohol dehydrogenase GroES-like domain J151_01138 PF00691 OmpA family J151_01138 PF05736 OprF membrane domain J151_01140 PF00849 RNA pseudouridylate synthase J151_01142 PF00155 Aminotransferase class I and II J151_01144 PF00528 Binding-protein-dependent transport system inner membrane component J151_01145 PF00528 Binding-protein-dependent transport system inner membrane component J151_01146 PF12857 TOBE-like domain J151_01146 PF17850 CysA C-terminal regulatory domain J151_01146 PF00005 ABC transporter J151_01148 PF08240 Alcohol dehydrogenase GroES-like domain J151_01148 PF00107 Zinc-binding dehydrogenase J151_01150 PF05506 Domain of unknown function (DUF756) J151_01150 PF04185 Phosphoesterase family J151_01151 PF10459 Peptidase S46 J151_01152 PF10459 Peptidase S46 J151_01153 PF00300 Histidine phosphatase superfamily (branch 1) J151_01154 PF02875 Mur ligase family, glutamate ligase domain J151_01154 PF08245 Mur ligase middle domain J151_01157 PF00156 Phosphoribosyl transferase domain J151_01158 PF04305 Protein of unknown function (DUF455) J151_01162 PF00149 Calcineurin-like phosphoesterase J151_01164 PF01569 PAP2 superfamily J151_01165 PF13439 Glycosyltransferase Family 4 J151_01165 PF00534 Glycosyl transferases group 1 J151_01166 PF02541 Ppx/GppA phosphatase family J151_01167 PF02503 Polyphosphate kinase middle domain J151_01167 PF13089 Polyphosphate kinase N-terminal domain J151_01167 PF17941 Polyphosphate kinase C-terminal domain 1 J151_01167 PF13090 Polyphosphate kinase C-terminal domain 2 J151_01168 PF11808 Phosphate regulon sensor protein PhoR J151_01168 PF00989 PAS fold J151_01168 PF00512 His Kinase A (phospho-acceptor) domain J151_01168 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_01169 PF00072 Response regulator receiver domain J151_01169 PF00486 Transcriptional regulatory protein, C terminal J151_01170 PF01435 Peptidase family M48 J151_01170 PF13181 Tetratricopeptide repeat J151_01171 PF00462 Glutaredoxin J151_01173 PF00180 Isocitrate/isopropylmalate dehydrogenase J151_01180 PF01527 Transposase J151_01203 PF01527 Transposase J151_01204 PF13333 Integrase core domain J151_01204 PF00665 Integrase core domain J151_01204 PF13276 HTH-like domain J151_01207 PF00989 PAS fold J151_01207 PF00512 His Kinase A (phospho-acceptor) domain J151_01207 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_01210 PF05698 Bacterial trigger factor protein (TF) C-terminus J151_01210 PF05697 Bacterial trigger factor protein (TF) J151_01211 PF00574 Clp protease J151_01212 PF07724 AAA domain (Cdc48 subfamily) J151_01212 PF10431 C-terminal, D2-small domain, of ClpB protein J151_01212 PF06689 ClpX C4-type zinc finger J151_01213 PF05362 Lon protease (S16) C-terminal proteolytic domain J151_01213 PF00004 ATPase family associated with various cellular activities (AAA) J151_01213 PF02190 ATP-dependent protease La (LON) substrate-binding domain J151_01214 PF00216 Bacterial DNA-binding protein J151_01220 PF01476 LysM domain J151_01220 PF05257 CHAP domain J151_01221 PF00753 Metallo-beta-lactamase superfamily J151_01221 PF16123 Hydroxyacylglutathione hydrolase C-terminus J151_01223 PF00075 RNase H J151_01224 PF00929 Exonuclease J151_01228 PF01075 Glycosyltransferase family 9 (heptosyltransferase) J151_01230 PF00753 Metallo-beta-lactamase superfamily J151_01230 PF12706 Beta-lactamase superfamily domain J151_01231 PF06463 Molybdenum Cofactor Synthesis C J151_01231 PF04055 Radical SAM superfamily J151_01232 PF01967 MoaC family J151_01233 PF02597 ThiS family J151_01234 PF02391 MoaE protein J151_01237 PF01527 Transposase J151_01244 PF12170 DNA polymerase III tau subunit V interacting with alpha J151_01244 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding J151_01244 PF12169 DNA polymerase III subunits gamma and tau domain III J151_01245 PF02575 YbaB/EbfC DNA-binding family J151_01246 PF13662 Toprim domain J151_01246 PF02132 RecR protein J151_01247 PF01230 HIT domain J151_01249 PF13559 Domain of unknown function (DUF4129) J151_01249 PF11992 Domain of unknown function (DUF3488) J151_01249 PF01841 Transglutaminase-like superfamily J151_01251 PF17863 AAA lid domain J151_01251 PF07726 ATPase family associated with various cellular activities (AAA) J151_01255 PF02545 Maf-like protein J151_01256 PF02620 Large ribosomal RNA subunit accumulation protein YceD J151_01257 PF01783 Ribosomal L32p protein family J151_01258 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J151_01258 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J151_01260 PF00698 Acyl transferase domain J151_01262 PF00550 Phosphopantetheine attachment site J151_01263 PF00109 Beta-ketoacyl synthase, N-terminal domain J151_01263 PF02801 Beta-ketoacyl synthase, C-terminal domain J151_01264 PF04715 Anthranilate synthase component I, N terminal region J151_01264 PF00425 chorismate binding enzyme J151_01265 PF02618 YceG-like family J151_01266 PF09115 DNA polymerase III, delta subunit, C terminal J151_01270 PF02954 Bacterial regulatory protein, Fis family J151_01270 PF06506 Propionate catabolism activator J151_01270 PF00158 Sigma-54 interaction domain J151_01272 PF00285 Citrate synthase, C-terminal domain J151_01273 PF00330 Aconitase family (aconitate hydratase) J151_01273 PF00694 Aconitase C-terminal domain J151_01274 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH J151_01276 PF04303 PrpF protein J151_01277 PF07715 TonB-dependent Receptor Plug Domain J151_01277 PF00593 TonB dependent receptor J151_01279 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain J151_01279 PF17962 Bacterial macroglobulin domain 6 J151_01279 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain J151_01279 PF07703 Alpha-2-macroglobulin bait region domain J151_01279 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain J151_01279 PF01835 MG2 domain J151_01279 PF11974 Bacterial alpha-2-macroglobulin MG3 domain J151_01279 PF00207 Alpha-2-macroglobulin family J151_01282 PF00912 Transglycosylase J151_01282 PF00905 Penicillin binding protein transpeptidase domain J151_01282 PF06832 Penicillin-Binding Protein C-terminus Family J151_01284 PF08534 Redoxin J151_01286 PF01556 DnaJ C terminal domain J151_01286 PF00226 DnaJ domain J151_01288 PF00072 Response regulator receiver domain J151_01290 PF01145 SPFH domain / Band 7 family J151_01290 PF12221 Bacterial membrane protein N terminal J151_01291 PF01145 SPFH domain / Band 7 family J151_01293 PF00709 Adenylosuccinate synthetase J151_01294 PF01433 Peptidase family M1 domain J151_01294 PF11838 ERAP1-like C-terminal domain J151_01297 PF00440 Bacterial regulatory proteins, tetR family J151_01310 PF13456 Reverse transcriptase-like J151_01310 PF00300 Histidine phosphatase superfamily (branch 1) J151_01311 PF01256 Carbohydrate kinase J151_01313 PF00723 Glycosyl hydrolases family 15 J151_01315 PF07971 Glycosyl hydrolase family 92 J151_01315 PF17678 Glycosyl hydrolase family 92 N-terminal domain J151_01319 PF07992 Pyridine nucleotide-disulphide oxidoreductase J151_01323 PF17755 UvrA DNA-binding domain J151_01324 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J151_01324 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J151_01325 PF03450 CO dehydrogenase flavoprotein C-terminal domain J151_01325 PF00941 FAD binding domain in molybdopterin dehydrogenase J151_01326 PF00111 2Fe-2S iron-sulfur cluster binding domain J151_01326 PF01799 [2Fe-2S] binding domain J151_01333 PF01726 LexA DNA binding domain J151_01333 PF00717 Peptidase S24-like J151_01336 PF14579 Helix-hairpin-helix motif J151_01336 PF07733 Bacterial DNA polymerase III alpha NTPase domain J151_01336 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J151_01336 PF02811 PHP domain J151_01337 PF00326 Prolyl oligopeptidase family J151_01339 PF03169 OPT oligopeptide transporter protein J151_01342 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J151_01342 PF00326 Prolyl oligopeptidase family J151_01342 PF07676 WD40-like Beta Propeller Repeat J151_01345 PF12833 Helix-turn-helix domain J151_01345 PF02311 AraC-like ligand binding domain J151_01350 PF06628 Catalase-related immune-responsive J151_01350 PF18011 C-terminal domain found in long catalases J151_01350 PF00199 Catalase J151_01351 PF00248 Aldo/keto reductase family J151_01352 PF00135 Carboxylesterase family J151_01353 PF02347 Glycine cleavage system P-protein J151_01356 PF07690 Major Facilitator Superfamily J151_01359 PF08019 Phosphoethanolamine transferase EptA/EptB J151_01359 PF00884 Sulfatase J151_01362 PF00072 Response regulator receiver domain J151_01362 PF00486 Transcriptional regulatory protein, C terminal J151_01363 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_01363 PF00512 His Kinase A (phospho-acceptor) domain J151_01363 PF08521 Two-component sensor kinase N-terminal J151_01365 PF03776 Septum formation topological specificity factor MinE J151_01366 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J151_01367 PF03775 Septum formation inhibitor MinC, C-terminal domain J151_01367 PF05209 Septum formation inhibitor MinC, N-terminal domain J151_01369 PF07730 Histidine kinase J151_01370 PF00196 Bacterial regulatory proteins, luxR family J151_01370 PF00072 Response regulator receiver domain J151_01373 PF00730 HhH-GPD superfamily base excision DNA repair protein J151_01378 PF02222 ATP-grasp domain J151_01380 PF04377 Arginine-tRNA-protein transferase, C terminus J151_01380 PF04376 Arginine-tRNA-protein transferase, N terminus J151_01386 PF00378 Enoyl-CoA hydratase/isomerase J151_01389 PF00005 ABC transporter J151_01389 PF17755 UvrA DNA-binding domain J151_01389 PF17760 UvrA interaction domain J151_01390 PF00829 Ribosomal prokaryotic L21 protein J151_01391 PF01016 Ribosomal L27 protein J151_01392 PF01018 GTP1/OBG J151_01392 PF01926 50S ribosome-binding GTPase J151_01393 PF01649 Ribosomal protein S20 J151_01394 PF03023 Lipid II flippase MurJ J151_01395 PF06574 FAD synthetase J151_01395 PF01687 Riboflavin kinase J151_01396 PF00133 tRNA synthetases class I (I, L, M and V) J151_01396 PF08264 Anticodon-binding domain of tRNA J151_01396 PF06827 Zinc finger found in FPG and IleRS J151_01397 PF01252 Signal peptidase (SPase) II J151_01398 PF02401 LytB protein J151_01400 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J151_01400 PF06481 COX Aromatic Rich Motif J151_01401 PF00115 Cytochrome C and Quinol oxidase polypeptide I J151_01402 PF00510 Cytochrome c oxidase subunit III J151_01403 PF03626 Prokaryotic Cytochrome C oxidase subunit IV J151_01405 PF18073 Rubredoxin metal binding domain J151_01406 PF05656 Protein of unknown function (DUF805) J151_01408 PF12833 Helix-turn-helix domain J151_01409 PF00183 Hsp90 protein J151_01409 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_01411 PF01740 STAS domain J151_01411 PF08678 Rsbr N terminal J151_01412 PF01740 STAS domain J151_01413 PF13581 Histidine kinase-like ATPase domain J151_01415 PF01627 Hpt domain J151_01415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_01415 PF17149 Periplasmic sensor domain found in signal transduction proteins J151_01415 PF00512 His Kinase A (phospho-acceptor) domain J151_01415 PF00072 Response regulator receiver domain J151_01415 PF00672 HAMP domain J151_01416 PF13188 PAS domain J151_01416 PF08448 PAS fold J151_01416 PF00512 His Kinase A (phospho-acceptor) domain J151_01416 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_01416 PF00072 Response regulator receiver domain J151_01417 PF04616 Glycosyl hydrolases family 43 J151_01417 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J151_01418 PF07715 TonB-dependent Receptor Plug Domain J151_01418 PF00593 TonB dependent receptor J151_01419 PF00085 Thioredoxin J151_01420 PF07237 Protein of unknown function (DUF1428) J151_01421 PF00512 His Kinase A (phospho-acceptor) domain J151_01421 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_01421 PF13492 GAF domain J151_01421 PF13493 Domain of unknown function (DUF4118) J151_01421 PF02702 Osmosensitive K+ channel His kinase sensor domain J151_01422 PF01339 CheB methylesterase J151_01423 PF01739 CheR methyltransferase, SAM binding domain J151_01423 PF03705 CheR methyltransferase, all-alpha domain J151_01424 PF00672 HAMP domain J151_01424 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J151_01424 PF00072 Response regulator receiver domain J151_01424 PF01627 Hpt domain J151_01424 PF00512 His Kinase A (phospho-acceptor) domain J151_01424 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_01425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_01425 PF13426 PAS domain J151_01425 PF00072 Response regulator receiver domain J151_01426 PF00072 Response regulator receiver domain J151_01427 PF00722 Glycosyl hydrolases family 16 J151_01428 PF06964 Alpha-L-arabinofuranosidase C-terminal domain J151_01429 PF01263 Aldose 1-epimerase J151_01430 PF01578 Cytochrome C assembly protein J151_01431 PF02881 SRP54-type protein, helical bundle domain J151_01431 PF02978 Signal peptide binding domain J151_01431 PF00448 SRP54-type protein, GTPase domain J151_01432 PF03060 Nitronate monooxygenase J151_01433 PF01063 Amino-transferase class IV J151_01434 PF00886 Ribosomal protein S16 J151_01435 PF05239 PRC-barrel domain J151_01435 PF01782 RimM N-terminal domain J151_01436 PF01746 tRNA (Guanine-1)-methyltransferase J151_01437 PF01245 Ribosomal protein L19 J151_01438 PF01554 MatE J151_01439 PF01554 MatE J151_01442 PF01479 S4 domain J151_01443 PF00141 Peroxidase J151_01445 PF00488 MutS domain V J151_01445 PF05188 MutS domain II J151_01445 PF05192 MutS domain III J151_01445 PF01624 MutS domain I J151_01445 PF05190 MutS family domain IV J151_01448 PF03527 RHS protein J151_01448 PF05593 RHS Repeat J151_01452 PF00703 Glycosyl hydrolases family 2 J151_01452 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 J151_01452 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J151_01452 PF16355 Domain of unknown function (DUF4982) J151_01452 PF02837 Glycosyl hydrolases family 2, sugar binding domain J151_01453 PF07745 Glycosyl hydrolase family 53 J151_01455 PF01381 Helix-turn-helix J151_01455 PF06114 IrrE N-terminal-like domain J151_01455 PF09856 Predicted transcriptional regulator (DUF2083) J151_01456 PF00171 Aldehyde dehydrogenase family J151_01457 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J151_01457 PF02770 Acyl-CoA dehydrogenase, middle domain J151_01457 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J151_01458 PF00378 Enoyl-CoA hydratase/isomerase J151_01459 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J151_01459 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J151_01459 PF00378 Enoyl-CoA hydratase/isomerase J151_01460 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J151_01460 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J151_01461 PF01545 Cation efflux family J151_01462 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J151_01462 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J151_01462 PF00378 Enoyl-CoA hydratase/isomerase J151_01463 PF04542 Sigma-70 region 2 J151_01463 PF08281 Sigma-70, region 4 J151_01465 PF13180 PDZ domain J151_01466 PF06421 GTP-binding protein LepA C-terminus J151_01466 PF00679 Elongation factor G C-terminus J151_01466 PF00009 Elongation factor Tu GTP binding domain J151_01466 PF03144 Elongation factor Tu domain 2 J151_01467 PF10502 Signal peptidase, peptidase S26 J151_01469 PF00035 Double-stranded RNA binding motif J151_01469 PF14622 Ribonuclease-III-like J151_01470 PF01926 50S ribosome-binding GTPase J151_01470 PF07650 KH domain J151_01471 PF11967 Recombination protein O N terminal J151_01471 PF02565 Recombination protein O C terminal J151_01473 PF05958 tRNA (Uracil-5-)-methyltransferase J151_01475 PF01323 DSBA-like thioredoxin domain J151_01476 PF01593 Flavin containing amine oxidoreductase J151_01477 PF04244 Deoxyribodipyrimidine photo-lyase-related protein J151_01478 PF00933 Glycosyl hydrolase family 3 N terminal domain J151_01480 PF01048 Phosphorylase superfamily J151_01481 PF00313 'Cold-shock' DNA-binding domain J151_01482 PF01494 FAD binding domain J151_01484 PF08494 DEAD/H associated J151_01484 PF00270 DEAD/DEAH box helicase J151_01484 PF00271 Helicase conserved C-terminal domain J151_01485 PF04679 ATP dependent DNA ligase C terminal region J151_01485 PF04675 DNA ligase N terminus J151_01485 PF01068 ATP dependent DNA ligase domain J151_01487 PF04679 ATP dependent DNA ligase C terminal region J151_01487 PF04675 DNA ligase N terminus J151_01487 PF01068 ATP dependent DNA ligase domain J151_01490 PF00072 Response regulator receiver domain J151_01490 PF00990 Diguanylate cyclase, GGDEF domain J151_01493 PF02803 Thiolase, C-terminal domain J151_01493 PF00108 Thiolase, N-terminal domain J151_01494 PF00082 Subtilase family J151_01494 PF12951 Passenger-associated-transport-repeat J151_01494 PF03797 Autotransporter beta-domain J151_01495 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J151_01495 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain J151_01497 PF01863 Protein of unknown function DUF45 J151_01498 PF07043 Protein of unknown function (DUF1328) J151_01500 PF01258 Prokaryotic dksA/traR C4-type zinc finger J151_01504 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J151_01506 PF08274 PhnA Zinc-Ribbon J151_01506 PF03831 PhnA domain J151_01507 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J151_01508 PF07690 Major Facilitator Superfamily J151_01515 PF03706 Lysylphosphatidylglycerol synthase TM region J151_01515 PF09924 Uncharacterised conserved protein (DUF2156) J151_01518 PF01042 Endoribonuclease L-PSP J151_01527 PF04545 Sigma-70, region 4 J151_01527 PF04542 Sigma-70 region 2 J151_01530 PF04060 Putative Fe-S cluster J151_01532 PF01588 Putative tRNA binding domain J151_01532 PF09334 tRNA synthetases class I (M) J151_01535 PF13732 Domain of unknown function (DUF4162) J151_01535 PF00005 ABC transporter J151_01536 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J151_01537 PF00324 Amino acid permease J151_01538 PF02574 Homocysteine S-methyltransferase J151_01540 PF02592 Putative vitamin uptake transporter J151_01544 PF03551 Transcriptional regulator PadR-like family J151_01551 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit J151_01552 PF14579 Helix-hairpin-helix motif J151_01552 PF01336 OB-fold nucleic acid binding domain J151_01552 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J151_01552 PF07733 Bacterial DNA polymerase III alpha NTPase domain J151_01552 PF02811 PHP domain J151_01553 PF01351 Ribonuclease HII J151_01554 PF02684 Lipid-A-disaccharide synthetase J151_01555 PF00132 Bacterial transferase hexapeptide (six repeats) J151_01555 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 J151_01556 PF07977 FabA-like domain J151_01557 PF00132 Bacterial transferase hexapeptide (six repeats) J151_01557 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD J151_01559 PF07244 Surface antigen variable number repeat J151_01559 PF01103 Surface antigen J151_01560 PF02163 Peptidase family M50 J151_01560 PF17820 PDZ domain J151_01561 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain J151_01561 PF13288 DXP reductoisomerase C-terminal domain J151_01561 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase J151_01563 PF01255 Putative undecaprenyl diphosphate synthase J151_01564 PF01765 Ribosome recycling factor J151_01565 PF00696 Amino acid kinase family J151_01566 PF00990 Diguanylate cyclase, GGDEF domain J151_01566 PF00072 Response regulator receiver domain J151_01567 PF00889 Elongation factor TS J151_01568 PF00318 Ribosomal protein S2 J151_01575 PF00557 Metallopeptidase family M24 J151_01576 PF01909 Nucleotidyltransferase domain J151_01576 PF01966 HD domain J151_01576 PF08335 GlnD PII-uridylyltransferase J151_01577 PF14602 Hexapeptide repeat of succinyl-transferase J151_01577 PF00132 Bacterial transferase hexapeptide (six repeats) J151_01577 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal J151_01578 PF03960 ArsC family J151_01579 PF01546 Peptidase family M20/M25/M40 J151_01579 PF07687 Peptidase dimerisation domain J151_01580 PF13537 Glutamine amidotransferase domain J151_01580 PF00733 Asparagine synthase J151_01582 PF00593 TonB dependent receptor J151_01582 PF07715 TonB-dependent Receptor Plug Domain J151_01584 PF01804 Penicillin amidase J151_01585 PF00210 Ferritin-like domain J151_01586 PF05724 Thiopurine S-methyltransferase (TPMT) J151_01588 PF03989 DNA gyrase C-terminal domain, beta-propeller J151_01588 PF00521 DNA gyrase/topoisomerase IV, subunit A J151_01591 PF02321 Outer membrane efflux protein J151_01592 PF00529 HlyD membrane-fusion protein of T1SS J151_01592 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J151_01593 PF07690 Major Facilitator Superfamily J151_01595 PF00933 Glycosyl hydrolase family 3 N terminal domain J151_01595 PF01915 Glycosyl hydrolase family 3 C-terminal domain J151_01595 PF14310 Fibronectin type III-like domain J151_01597 PF00854 POT family J151_01602 PF12802 MarR family J151_01603 PF01432 Peptidase family M3 J151_01604 PF00255 Glutathione peroxidase J151_01605 PF00970 Oxidoreductase FAD-binding domain J151_01605 PF00175 Oxidoreductase NAD-binding domain J151_01606 PF00005 ABC transporter J151_01607 PF05683 Fumarase C-terminus J151_01607 PF05681 Fumarate hydratase (Fumerase) J151_01609 PF00484 Carbonic anhydrase J151_01610 PF02253 Phospholipase A1 J151_01612 PF00313 'Cold-shock' DNA-binding domain J151_01615 PF00899 ThiF family J151_01616 PF01026 TatD related DNase J151_01619 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J151_01619 PF02770 Acyl-CoA dehydrogenase, middle domain J151_01619 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J151_01621 PF00043 Glutathione S-transferase, C-terminal domain J151_01621 PF02798 Glutathione S-transferase, N-terminal domain J151_01622 PF13537 Glutamine amidotransferase domain J151_01622 PF00733 Asparagine synthase J151_01623 PF03358 NADPH-dependent FMN reductase J151_01624 PF00772 DnaB-like helicase N terminal domain J151_01624 PF03796 DnaB-like helicase C terminal domain J151_01625 PF00875 DNA photolyase J151_01625 PF03441 FAD binding domain of DNA photolyase J151_01626 PF00691 OmpA family J151_01626 PF05736 OprF membrane domain J151_01628 PF03466 LysR substrate binding domain J151_01628 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J151_01631 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J151_01631 PF00529 HlyD membrane-fusion protein of T1SS J151_01632 PF00873 AcrB/AcrD/AcrF family J151_01633 PF00106 short chain dehydrogenase J151_01634 PF02321 Outer membrane efflux protein J151_01635 PF00990 Diguanylate cyclase, GGDEF domain J151_01635 PF08448 PAS fold J151_01637 PF00990 Diguanylate cyclase, GGDEF domain J151_01654 PF01527 Transposase J151_01663 PF00082 Subtilase family J151_01664 PF01668 SmpB protein J151_01665 PF03364 Polyketide cyclase / dehydrase and lipid transport J151_01666 PF03658 RnfH family Ubiquitin J151_01667 PF04355 SmpA / OmlA family J151_01668 PF01475 Ferric uptake regulator family J151_01669 PF02463 RecF/RecN/SMC N terminal domain J151_01670 PF01628 HrcA protein C terminal domain J151_01670 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding J151_01671 PF01025 GrpE J151_01672 PF00012 Hsp70 protein J151_01673 PF00226 DnaJ domain J151_01673 PF00684 DnaJ central domain J151_01673 PF01556 DnaJ C terminal domain J151_01675 PF08543 Phosphomethylpyrimidine kinase J151_01680 PF03412 Peptidase C39 family J151_01680 PF00005 ABC transporter J151_01680 PF00664 ABC transporter transmembrane region J151_01681 PF03466 LysR substrate binding domain J151_01681 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J151_01682 PF00664 ABC transporter transmembrane region J151_01682 PF00005 ABC transporter J151_01683 PF01205 Uncharacterized protein family UPF0029 J151_01684 PF03641 Possible lysine decarboxylase J151_01685 PF07992 Pyridine nucleotide-disulphide oxidoreductase J151_01685 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J151_01686 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J151_01686 PF02817 e3 binding domain J151_01686 PF00364 Biotin-requiring enzyme J151_01687 PF00676 Dehydrogenase E1 component J151_01687 PF16870 2-oxoglutarate dehydrogenase C-terminal J151_01687 PF02779 Transketolase, pyrimidine binding domain J151_01687 PF16078 2-oxoglutarate dehydrogenase N-terminus J151_01689 PF08007 Cupin superfamily protein J151_01691 PF00206 Lyase J151_01691 PF08328 Adenylosuccinate lyase C-terminal J151_01693 PF01595 Cyclin M transmembrane N-terminal domain J151_01693 PF00571 CBS domain J151_01693 PF03471 Transporter associated domain J151_01694 PF00206 Lyase J151_01694 PF10415 Fumarase C C-terminus J151_01699 PF00005 ABC transporter J151_01700 PF00392 Bacterial regulatory proteins, gntR family J151_01702 PF00255 Glutathione peroxidase J151_01703 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J151_01703 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J151_01704 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J151_01704 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J151_01704 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J151_01705 PF04102 SlyX J151_01708 PF00356 Bacterial regulatory proteins, lacI family J151_01709 PF07690 Major Facilitator Superfamily J151_01710 PF00294 pfkB family carbohydrate kinase J151_01712 PF00809 Pterin binding enzyme J151_01712 PF02607 B12 binding domain J151_01712 PF02574 Homocysteine S-methyltransferase J151_01712 PF02965 Vitamin B12 dependent methionine synthase, activation domain J151_01712 PF02310 B12 binding domain J151_01713 PF02574 Homocysteine S-methyltransferase J151_01713 PF00809 Pterin binding enzyme J151_01714 PF01209 ubiE/COQ5 methyltransferase family J151_01715 PF02770 Acyl-CoA dehydrogenase, middle domain J151_01715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J151_01715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J151_01718 PF00575 S1 RNA binding domain J151_01718 PF08461 Ribonuclease R winged-helix domain J151_01718 PF17876 Cold shock domain J151_01718 PF08206 Ribonuclease B OB domain J151_01718 PF00773 RNB domain J151_01720 PF00588 SpoU rRNA Methylase family J151_01720 PF08032 RNA 2'-O ribose methyltransferase substrate binding J151_01721 PF07694 5TMR of 5TMR-LYT J151_01721 PF00990 Diguanylate cyclase, GGDEF domain J151_01722 PF00929 Exonuclease J151_01724 PF01895 PhoU domain J151_01725 PF00005 ABC transporter J151_01726 PF00528 Binding-protein-dependent transport system inner membrane component J151_01727 PF00528 Binding-protein-dependent transport system inner membrane component J151_01728 PF12849 PBP superfamily domain J151_01729 PF12849 PBP superfamily domain J151_01732 PF00484 Carbonic anhydrase J151_01733 PF01740 STAS domain J151_01733 PF00916 Sulfate permease family J151_01734 PF00633 Helix-hairpin-helix motif J151_01734 PF10576 Iron-sulfur binding domain of endonuclease III J151_01734 PF00730 HhH-GPD superfamily base excision DNA repair protein J151_01736 PF00378 Enoyl-CoA hydratase/isomerase J151_01737 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J151_01737 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J151_01738 PF00293 NUDIX domain J151_01739 PF00581 Rhodanese-like domain J151_01746 PF01170 Putative RNA methylase family UPF0020 J151_01746 PF10672 S-adenosylmethionine-dependent methyltransferase J151_01746 PF02926 THUMP domain J151_01747 PF01513 ATP-NAD kinase J151_01751 PF08411 Exonuclease C-terminal J151_01751 PF00929 Exonuclease J151_01752 PF01494 FAD binding domain J151_01753 PF00266 Aminotransferase class-V J151_01755 PF06052 3-hydroxyanthranilic acid dioxygenase J151_01756 PF00484 Carbonic anhydrase J151_01765 PF00196 Bacterial regulatory proteins, luxR family J151_01765 PF00072 Response regulator receiver domain J151_01768 PF04299 Putative FMN-binding domain J151_01772 PF00152 tRNA synthetases class II (D, K and N) J151_01772 PF01336 OB-fold nucleic acid binding domain J151_01773 PF01521 Iron-sulphur cluster biosynthesis J151_01774 PF01250 Ribosomal protein S6 J151_01775 PF01084 Ribosomal protein S18 J151_01776 PF01281 Ribosomal protein L9, N-terminal domain J151_01776 PF03948 Ribosomal protein L9, C-terminal domain J151_01777 PF02463 RecF/RecN/SMC N terminal domain J151_01778 PF04354 ZipA, C-terminal FtsZ-binding domain J151_01780 PF00155 Aminotransferase class I and II J151_01781 PF00533 BRCA1 C Terminus (BRCT) domain J151_01781 PF12826 Helix-hairpin-helix motif J151_01781 PF03119 NAD-dependent DNA ligase C4 zinc finger domain J151_01781 PF01653 NAD-dependent DNA ligase adenylation domain J151_01781 PF03120 NAD-dependent DNA ligase OB-fold domain J151_01782 PF00152 tRNA synthetases class II (D, K and N) J151_01784 PF01008 Initiation factor 2 subunit family J151_01785 PF03989 DNA gyrase C-terminal domain, beta-propeller J151_01785 PF00521 DNA gyrase/topoisomerase IV, subunit A J151_01786 PF13360 PQQ-like domain J151_01788 PF17392 Urocanase C-terminal domain J151_01788 PF17391 Urocanase N-terminal domain J151_01788 PF01175 Urocanase Rossmann-like domain J151_01790 PF00221 Aromatic amino acid lyase J151_01791 PF07969 Amidohydrolase family J151_01793 PF07702 UTRA domain J151_01793 PF00392 Bacterial regulatory proteins, gntR family J151_01799 PF01794 Ferric reductase like transmembrane component J151_01800 PF00174 Oxidoreductase molybdopterin binding domain J151_01801 PF00266 Aminotransferase class-V J151_01802 PF01842 ACT domain J151_01802 PF01817 Chorismate mutase type II J151_01802 PF00800 Prephenate dehydratase J151_01803 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J151_01805 PF03544 Gram-negative bacterial TonB protein C-terminal J151_01806 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J151_01806 PF02403 Seryl-tRNA synthetase N-terminal domain J151_01807 PF02525 Flavodoxin-like fold J151_01808 PF03466 LysR substrate binding domain J151_01808 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J151_01813 PF01527 Transposase J151_01814 PF13276 HTH-like domain J151_01814 PF00665 Integrase core domain J151_01814 PF13333 Integrase core domain J151_01819 PF02203 Tar ligand binding domain homologue J151_01819 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J151_01819 PF00672 HAMP domain J151_01822 PF13188 PAS domain J151_01822 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_01822 PF00072 Response regulator receiver domain J151_01822 PF00512 His Kinase A (phospho-acceptor) domain J151_01822 PF08448 PAS fold J151_01823 PF00072 Response regulator receiver domain J151_01823 PF00486 Transcriptional regulatory protein, C terminal J151_01824 PF06745 KaiC J151_01825 PF00072 Response regulator receiver domain J151_01825 PF13426 PAS domain J151_01825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_01827 PF03918 Cytochrome C biogenesis protein J151_01828 PF08534 Redoxin J151_01829 PF01578 Cytochrome C assembly protein J151_01829 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal J151_01830 PF03100 CcmE J151_01832 PF01578 Cytochrome C assembly protein J151_01833 PF00082 Subtilase family J151_01835 PF04542 Sigma-70 region 2 J151_01835 PF08281 Sigma-70, region 4 J151_01838 PF00034 Cytochrome c J151_01841 PF05523 WxcM-like, C-terminal J151_01845 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J151_01846 PF01943 Polysaccharide biosynthesis protein J151_01847 PF00535 Glycosyl transferase family 2 J151_01850 PF08241 Methyltransferase domain J151_01854 PF13579 Glycosyl transferase 4-like domain J151_01854 PF00534 Glycosyl transferases group 1 J151_01857 PF00005 ABC transporter J151_01858 PF00664 ABC transporter transmembrane region J151_01858 PF00005 ABC transporter J151_01859 PF07690 Major Facilitator Superfamily J151_01860 PF00296 Luciferase-like monooxygenase J151_01863 PF03471 Transporter associated domain J151_01863 PF01595 Cyclin M transmembrane N-terminal domain J151_01863 PF00571 CBS domain J151_01865 PF01384 Phosphate transporter family J151_01868 PF01751 Toprim domain J151_01868 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_01868 PF00986 DNA gyrase B subunit, carboxyl terminus J151_01868 PF00204 DNA gyrase B J151_01870 PF06418 CTP synthase N-terminus J151_01870 PF00117 Glutamine amidotransferase class-I J151_01871 PF00793 DAHP synthetase I family J151_01873 PF00113 Enolase, C-terminal TIM barrel domain J151_01873 PF03952 Enolase, N-terminal domain J151_01874 PF04977 Septum formation initiator J151_01875 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase J151_01876 PF02542 YgbB family J151_01877 PF01142 tRNA pseudouridine synthase D (TruD) J151_01878 PF01713 Smr domain J151_01879 PF01975 Survival protein SurE J151_01881 PF09335 SNARE associated Golgi protein J151_01882 PF01476 LysM domain J151_01882 PF01551 Peptidase family M23 J151_01884 PF04430 Protein of unknown function (DUF498/DUF598) J151_01885 PF01985 CRS1 / YhbY (CRM) domain J151_01886 PF01728 FtsJ-like methyltransferase J151_01887 PF01434 Peptidase family M41 J151_01887 PF06480 FtsH Extracellular J151_01887 PF17862 AAA+ lid domain J151_01887 PF00004 ATPase family associated with various cellular activities (AAA) J151_01888 PF00809 Pterin binding enzyme J151_01890 PF17209 Hfq protein J151_01891 PF16360 GTP-binding GTPase Middle Region J151_01891 PF01926 50S ribosome-binding GTPase J151_01891 PF13167 GTP-binding GTPase N-terminal J151_01892 PF02464 Competence-damaged protein J151_01893 PF03109 ABC1 family J151_01894 PF01726 LexA DNA binding domain J151_01894 PF00717 Peptidase S24-like J151_01895 PF00154 recA bacterial DNA recombination protein J151_01896 PF02631 RecX family J151_01897 PF02272 DHHA1 domain J151_01897 PF01411 tRNA synthetases class II (A) J151_01897 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J151_01898 PF02599 Global regulator protein family J151_01900 PF08447 PAS fold J151_01900 PF13426 PAS domain J151_01900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J151_01901 PF02678 Pirin J151_01901 PF17954 Quercetinase C-terminal cupin domain J151_01902 PF03466 LysR substrate binding domain J151_01902 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J151_01907 PF08543 Phosphomethylpyrimidine kinase J151_01907 PF02581 Thiamine monophosphate synthase J151_01910 PF02562 PhoH-like protein J151_01910 PF13638 PIN domain J151_01911 PF00578 AhpC/TSA family J151_01914 PF00701 Dihydrodipicolinate synthetase family J151_01916 PF00037 4Fe-4S binding domain J151_01916 PF11953 Domain of unknown function (DUF3470) J151_01917 PF05035 2-keto-3-deoxy-galactonokinase J151_01918 PF08450 SMP-30/Gluconolactonase/LRE-like region J151_01919 PF13378 Enolase C-terminal domain-like J151_01919 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J151_01920 PF01081 KDPG and KHG aldolase J151_01922 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J151_01922 PF03466 LysR substrate binding domain J151_01925 PF03442 Carbohydrate binding domain X2 J151_01925 PF00942 Cellulose binding domain J151_01928 PF17137 Domain of unknown function (DUF5110) J151_01928 PF01055 Glycosyl hydrolases family 31 J151_01928 PF16338 Domain of unknown function (DUF4968) J151_01930 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J151_01930 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J151_01932 PF00083 Sugar (and other) transporter J151_01935 PF01520 N-acetylmuramoyl-L-alanine amidase J151_01936 PF02649 Type I GTP cyclohydrolase folE2 J151_01940 PF12627 Probable RNA and SrmB- binding site of polymerase A J151_01940 PF01743 Poly A polymerase head domain J151_01940 PF12626 Polymerase A arginine-rich C-terminus J151_01941 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J151_01942 PF02548 Ketopantoate hydroxymethyltransferase J151_01943 PF02569 Pantoate-beta-alanine ligase J151_01944 PF02261 Aspartate decarboxylase J151_01945 PF00342 Phosphoglucose isomerase J151_01949 PF00933 Glycosyl hydrolase family 3 N terminal domain J151_01949 PF14310 Fibronectin type III-like domain J151_01949 PF01915 Glycosyl hydrolase family 3 C-terminal domain J151_01950 PF00474 Sodium:solute symporter family J151_01951 PF00990 Diguanylate cyclase, GGDEF domain J151_01951 PF01590 GAF domain J151_01951 PF00563 EAL domain J151_01951 PF00360 Phytochrome region J151_01952 PF00150 Cellulase (glycosyl hydrolase family 5) J151_01952 PF02013 Cellulose or protein binding domain J151_01953 PF00072 Response regulator receiver domain J151_01955 PF04551 GcpE protein J151_01956 PF01569 PAP2 superfamily J151_01957 PF07690 Major Facilitator Superfamily J151_01958 PF01177 Asp/Glu/Hydantoin racemase J151_01959 PF00892 EamA-like transporter family J151_01960 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain J151_01960 PF01565 FAD binding domain J151_01961 PF01180 Dihydroorotate dehydrogenase J151_01964 PF00171 Aldehyde dehydrogenase family J151_01967 PF00535 Glycosyl transferase family 2 J151_01968 PF14883 Hypothetical glycosyl hydrolase family 13 J151_01968 PF01522 Polysaccharide deacetylase J151_01970 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB J151_01970 PF08479 POTRA domain, ShlB-type J151_01970 PF17287 POTRA domain J151_01971 PF05594 Haemagluttinin repeat J151_01971 PF04829 Pre-toxin domain with VENN motif J151_01971 PF13332 Hemagglutinin repeat J151_01972 PF04829 Pre-toxin domain with VENN motif J151_01972 PF13332 Hemagglutinin repeat J151_01972 PF05594 Haemagluttinin repeat J151_01974 PF13332 Hemagglutinin repeat J151_01974 PF05860 haemagglutination activity domain J151_01974 PF05594 Haemagluttinin repeat J151_01974 PF13018 Extended Signal Peptide of Type V secretion system J151_01974 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain J151_01976 PF00696 Amino acid kinase family J151_01976 PF01842 ACT domain J151_01976 PF13840 ACT domain J151_01976 PF00742 Homoserine dehydrogenase J151_01976 PF03447 Homoserine dehydrogenase, NAD binding domain J151_01977 PF00288 GHMP kinases N terminal domain J151_01977 PF08544 GHMP kinases C terminal J151_01979 PF14821 Threonine synthase N terminus J151_01979 PF00291 Pyridoxal-phosphate dependent enzyme J151_01981 PF00027 Cyclic nucleotide-binding domain J151_01981 PF13545 Crp-like helix-turn-helix domain J151_01982 PF03129 Anticodon binding domain J151_01982 PF13393 Histidyl-tRNA synthetase J151_01984 PF01634 ATP phosphoribosyltransferase J151_01984 PF08029 HisG, C-terminal domain J151_01985 PF00815 Histidinol dehydrogenase J151_01986 PF00155 Aminotransferase class I and II J151_01987 PF00475 Imidazoleglycerol-phosphate dehydratase J151_01988 PF00117 Glutamine amidotransferase class-I J151_01989 PF00977 Histidine biosynthesis protein J151_01990 PF00977 Histidine biosynthesis protein J151_01991 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase J151_01991 PF01502 Phosphoribosyl-AMP cyclohydrolase J151_01995 PF03079 ARD/ARD' family J151_01996 PF00596 Class II Aldolase and Adducin N-terminal domain J151_01997 PF13520 Amino acid permease J151_01998 PF13520 Amino acid permease J151_02000 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J151_02000 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J151_02000 PF01842 ACT domain J151_02001 PF01565 FAD binding domain J151_02001 PF02913 FAD linked oxidases, C-terminal domain J151_02005 PF01132 Elongation factor P (EF-P) OB domain J151_02005 PF08207 Elongation factor P (EF-P) KOW-like domain J151_02005 PF09285 Elongation factor P, C-terminal J151_02006 PF00106 short chain dehydrogenase J151_02007 PF00682 HMGL-like J151_02009 PF00378 Enoyl-CoA hydratase/isomerase J151_02011 PF02421 Ferrous iron transport protein B J151_02011 PF07670 Nucleoside recognition J151_02011 PF07664 Ferrous iron transport protein B C terminus J151_02014 PF00155 Aminotransferase class I and II J151_02015 PF03475 3-alpha domain J151_02015 PF03473 MOSC domain J151_02016 PF01113 Dihydrodipicolinate reductase, N-terminus J151_02016 PF05173 Dihydrodipicolinate reductase, C-terminus J151_02017 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain J151_02017 PF00117 Glutamine amidotransferase class-I J151_02019 PF02142 MGS-like domain J151_02019 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J151_02019 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J151_02020 PF03449 Transcription elongation factor, N-terminal J151_02020 PF01272 Transcription elongation factor, GreA/GreB, C-term J151_02022 PF02272 DHHA1 domain J151_02022 PF17768 RecJ OB domain J151_02022 PF01368 DHH family J151_02030 PF04397 LytTr DNA-binding domain J151_02030 PF00072 Response regulator receiver domain J151_02031 PF00472 RF-1 domain J151_02031 PF03462 PCRF domain J151_02032 PF01336 OB-fold nucleic acid binding domain J151_02032 PF00152 tRNA synthetases class II (D, K and N) J151_02033 PF00072 Response regulator receiver domain J151_02034 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_02034 PF01627 Hpt domain J151_02034 PF00512 His Kinase A (phospho-acceptor) domain J151_02034 PF00072 Response regulator receiver domain J151_02035 PF00378 Enoyl-CoA hydratase/isomerase J151_02036 PF00501 AMP-binding enzyme J151_02036 PF13193 AMP-binding enzyme C-terminal domain J151_02038 PF00694 Aconitase C-terminal domain J151_02038 PF00330 Aconitase family (aconitate hydratase) J151_02041 PF00330 Aconitase family (aconitate hydratase) J151_02041 PF06434 Aconitate hydratase 2 N-terminus J151_02041 PF11791 Aconitate B N-terminal domain J151_02042 PF00561 alpha/beta hydrolase fold J151_02043 PF03707 Bacterial signalling protein N terminal repeat J151_02043 PF00990 Diguanylate cyclase, GGDEF domain J151_02043 PF00563 EAL domain J151_02044 PF01339 CheB methylesterase J151_02044 PF00072 Response regulator receiver domain J151_02045 PF03975 CheD chemotactic sensory transduction J151_02046 PF01739 CheR methyltransferase, SAM binding domain J151_02046 PF03705 CheR methyltransferase, all-alpha domain J151_02047 PF02203 Tar ligand binding domain homologue J151_02047 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J151_02047 PF00672 HAMP domain J151_02048 PF02203 Tar ligand binding domain homologue J151_02048 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J151_02048 PF00672 HAMP domain J151_02049 PF00672 HAMP domain J151_02049 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J151_02049 PF02203 Tar ligand binding domain homologue J151_02050 PF02203 Tar ligand binding domain homologue J151_02050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J151_02050 PF00672 HAMP domain J151_02051 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J151_02051 PF02203 Tar ligand binding domain homologue J151_02051 PF00672 HAMP domain J151_02052 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J151_02052 PF00672 HAMP domain J151_02053 PF02203 Tar ligand binding domain homologue J151_02053 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J151_02053 PF00672 HAMP domain J151_02055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J151_02055 PF00672 HAMP domain J151_02055 PF02203 Tar ligand binding domain homologue J151_02056 PF00672 HAMP domain J151_02056 PF17200 Single Cache domain 2 J151_02056 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J151_02056 PF17200 Single Cache domain 2 J151_02056 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J151_02056 PF00672 HAMP domain J151_02058 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J151_02058 PF00672 HAMP domain J151_02058 PF02203 Tar ligand binding domain homologue J151_02059 PF01584 CheW-like domain J151_02059 PF01627 Hpt domain J151_02059 PF02895 Signal transducing histidine kinase, homodimeric domain J151_02059 PF09078 CheY binding J151_02059 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_02060 PF00072 Response regulator receiver domain J151_02062 PF01584 CheW-like domain J151_02063 PF13614 AAA domain J151_02064 PF00691 OmpA family J151_02064 PF13677 Membrane MotB of proton-channel complex MotA/MotB J151_02065 PF01618 MotA/TolQ/ExbB proton channel family J151_02068 PF03793 PASTA domain J151_02068 PF00069 Protein kinase domain J151_02078 PF01527 Transposase J151_02084 PF04055 Radical SAM superfamily J151_02084 PF13186 Iron-sulfur cluster-binding domain J151_02087 PF01627 Hpt domain J151_02087 PF02895 Signal transducing histidine kinase, homodimeric domain J151_02087 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_02087 PF01584 CheW-like domain J151_02087 PF07194 P2 response regulator binding domain J151_02088 PF04344 Chemotaxis phosphatase, CheZ J151_02089 PF00072 Response regulator receiver domain J151_02090 PF04542 Sigma-70 region 2 J151_02090 PF04539 Sigma-70 region 3 J151_02090 PF04545 Sigma-70, region 4 J151_02091 PF10609 NUBPL iron-transfer P-loop NTPase J151_02092 PF00448 SRP54-type protein, GTPase domain J151_02093 PF00771 FHIPEP family J151_02094 PF01312 FlhB HrpN YscU SpaS Family J151_02095 PF00563 EAL domain J151_02095 PF00990 Diguanylate cyclase, GGDEF domain J151_02095 PF03707 Bacterial signalling protein N terminal repeat J151_02096 PF00990 Diguanylate cyclase, GGDEF domain J151_02096 PF03707 Bacterial signalling protein N terminal repeat J151_02096 PF00563 EAL domain J151_02096 PF13188 PAS domain J151_02097 PF03707 Bacterial signalling protein N terminal repeat J151_02097 PF00563 EAL domain J151_02097 PF00990 Diguanylate cyclase, GGDEF domain J151_02097 PF13188 PAS domain J151_02098 PF01311 Bacterial export proteins, family 1 J151_02099 PF01313 Bacterial export proteins, family 3 J151_02101 PF00813 FliP family J151_02102 PF04347 Flagellar biosynthesis protein, FliO J151_02103 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J151_02104 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J151_02104 PF02154 Flagellar motor switch protein FliM J151_02108 PF18269 T3SS EscN ATPase C-terminal domain J151_02108 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J151_02110 PF01706 FliG C-terminal domain J151_02110 PF14842 FliG N-terminal domain J151_02110 PF14841 FliG middle domain J151_02111 PF01514 Secretory protein of YscJ/FliF family J151_02111 PF08345 Flagellar M-ring protein C-terminal J151_02112 PF02049 Flagellar hook-basal body complex protein FliE J151_02113 PF00534 Glycosyl transferases group 1 J151_02113 PF00535 Glycosyl transferase family 2 J151_02121 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J151_02121 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J151_02123 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J151_02124 PF00158 Sigma-54 interaction domain J151_02124 PF02954 Bacterial regulatory protein, Fis family J151_02124 PF00072 Response regulator receiver domain J151_02125 PF00072 Response regulator receiver domain J151_02125 PF01339 CheB methylesterase J151_02126 PF00309 Sigma-54 factor, Activator interacting domain (AID) J151_02126 PF04963 Sigma-54 factor, core binding domain J151_02126 PF04552 Sigma-54, DNA binding domain J151_02127 PF00072 Response regulator receiver domain J151_02127 PF00196 Bacterial regulatory proteins, luxR family J151_02130 PF02561 Flagellar protein FliS J151_02131 PF07196 Flagellin hook IN motif J151_02131 PF02465 Flagellar hook-associated protein 2 N-terminus J151_02131 PF07195 Flagellar hook-associated protein 2 C-terminus J151_02132 PF00700 Bacterial flagellin C-terminal helical region J151_02132 PF00669 Bacterial flagellin N-terminal helical region J151_02133 PF00700 Bacterial flagellin C-terminal helical region J151_02133 PF00669 Bacterial flagellin N-terminal helical region J151_02134 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J151_02134 PF07196 Flagellin hook IN motif J151_02135 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase J151_02135 PF10135 Rod binding protein J151_02136 PF02119 Flagellar P-ring protein J151_02137 PF02107 Flagellar L-ring protein J151_02138 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J151_02138 PF00460 Flagella basal body rod protein J151_02139 PF00460 Flagella basal body rod protein J151_02139 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J151_02140 PF00460 Flagella basal body rod protein J151_02140 PF07559 Flagellar basal body protein FlaE J151_02140 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J151_02141 PF03963 Flagellar hook capping protein - N-terminal region J151_02142 PF00460 Flagella basal body rod protein J151_02142 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J151_02144 PF00072 Response regulator receiver domain J151_02144 PF01584 CheW-like domain J151_02148 PF00512 His Kinase A (phospho-acceptor) domain J151_02148 PF00989 PAS fold J151_02148 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_02148 PF13426 PAS domain J151_02148 PF13188 PAS domain J151_02149 PF03707 Bacterial signalling protein N terminal repeat J151_02149 PF00563 EAL domain J151_02149 PF00990 Diguanylate cyclase, GGDEF domain J151_02150 PF07730 Histidine kinase J151_02150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_02151 PF00990 Diguanylate cyclase, GGDEF domain J151_02151 PF00563 EAL domain J151_02151 PF03707 Bacterial signalling protein N terminal repeat J151_02153 PF12729 Four helix bundle sensory module for signal transduction J151_02153 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J151_02153 PF00672 HAMP domain J151_02154 PF04356 Protein of unknown function (DUF489) J151_02156 PF00293 NUDIX domain J151_02157 PF02617 ATP-dependent Clp protease adaptor protein ClpS J151_02158 PF02861 Clp amino terminal domain, pathogenicity island component J151_02158 PF17871 AAA lid domain J151_02158 PF00004 ATPase family associated with various cellular activities (AAA) J151_02158 PF10431 C-terminal, D2-small domain, of ClpB protein J151_02158 PF07724 AAA domain (Cdc48 subfamily) J151_02159 PF01176 Translation initiation factor 1A / IF-1 J151_02160 PF03588 Leucyl/phenylalanyl-tRNA protein transferase J151_02162 PF07992 Pyridine nucleotide-disulphide oxidoreductase J151_02163 PF17854 FtsK alpha domain J151_02163 PF13491 4TM region of DNA translocase FtsK/SpoIIIE J151_02163 PF01580 FtsK/SpoIIIE family J151_02163 PF09397 Ftsk gamma domain J151_02165 PF03548 Outer membrane lipoprotein carrier protein LolA J151_02167 PF12002 MgsA AAA+ ATPase C terminal J151_02167 PF16193 AAA C-terminal domain J151_02167 PF00004 ATPase family associated with various cellular activities (AAA) J151_02169 PF02537 CrcB-like protein, Camphor Resistance (CrcB) J151_02171 PF02803 Thiolase, C-terminal domain J151_02171 PF00108 Thiolase, N-terminal domain J151_02172 PF00378 Enoyl-CoA hydratase/isomerase J151_02172 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J151_02172 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J151_02174 PF00334 Nucleoside diphosphate kinase J151_02175 PF04055 Radical SAM superfamily J151_02177 PF13464 Domain of unknown function (DUF4115) J151_02179 PF13360 PQQ-like domain J151_02179 PF01011 PQQ enzyme repeat J151_02180 PF01926 50S ribosome-binding GTPase J151_02180 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal J151_02181 PF03454 MoeA C-terminal region (domain IV) J151_02181 PF00994 Probable molybdopterin binding domain J151_02181 PF03453 MoeA N-terminal region (domain I and II) J151_02182 PF00899 ThiF family J151_02187 PF00107 Zinc-binding dehydrogenase J151_02187 PF13823 Alcohol dehydrogenase GroES-associated J151_02187 PF08240 Alcohol dehydrogenase GroES-like domain J151_02189 PF03372 Endonuclease/Exonuclease/phosphatase family J151_02191 PF00994 Probable molybdopterin binding domain J151_02191 PF03453 MoeA N-terminal region (domain I and II) J151_02191 PF03454 MoeA C-terminal region (domain IV) J151_02192 PF12804 MobA-like NTP transferase domain J151_02194 PF00561 alpha/beta hydrolase fold J151_02195 PF01566 Natural resistance-associated macrophage protein J151_02196 PF02742 Iron dependent repressor, metal binding and dimerisation domain J151_02196 PF01325 Iron dependent repressor, N-terminal DNA binding domain J151_02197 PF14437 MafB19-like deaminase J151_02198 PF00929 Exonuclease J151_02199 PF00924 Mechanosensitive ion channel J151_02199 PF05552 Conserved TM helix J151_02200 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain J151_02200 PF00391 PEP-utilising enzyme, mobile domain J151_02200 PF02896 PEP-utilising enzyme, TIM barrel domain J151_02201 PF03618 Kinase/pyrophosphorylase J151_02205 PF01066 CDP-alcohol phosphatidyltransferase J151_02207 PF00561 alpha/beta hydrolase fold J151_02210 PF00355 Rieske [2Fe-2S] domain J151_02210 PF01266 FAD dependent oxidoreductase J151_02212 PF17674 HHH domain J151_02212 PF09371 Tex-like protein N-terminal domain J151_02212 PF16921 Tex protein YqgF-like domain J151_02212 PF00575 S1 RNA binding domain J151_02213 PF00512 His Kinase A (phospho-acceptor) domain J151_02213 PF00072 Response regulator receiver domain J151_02213 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_02213 PF09308 LuxQ, periplasmic J151_02221 PF00034 Cytochrome c J151_02223 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J151_02224 PF00873 AcrB/AcrD/AcrF family J151_02225 PF00873 AcrB/AcrD/AcrF family J151_02226 PF01081 KDPG and KHG aldolase J151_02227 PF00920 Dehydratase family J151_02228 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase J151_02229 PF02685 Glucokinase J151_02230 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J151_02230 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J151_02231 PF00005 ABC transporter J151_02231 PF17912 MalK OB fold domain J151_02234 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J151_02235 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J151_02236 PF00890 FAD binding domain J151_02236 PF02910 Fumarate reductase flavoprotein C-term J151_02238 PF13085 2Fe-2S iron-sulfur cluster binding domain J151_02239 PF03937 Flavinator of succinate dehydrogenase J151_02241 PF12704 MacB-like periplasmic core domain J151_02241 PF02687 FtsX-like permease family J151_02242 PF00005 ABC transporter J151_02244 PF03772 Competence protein J151_02244 PF00753 Metallo-beta-lactamase superfamily J151_02245 PF01618 MotA/TolQ/ExbB proton channel family J151_02247 PF00664 ABC transporter transmembrane region J151_02247 PF00005 ABC transporter J151_02248 PF02606 Tetraacyldisaccharide-1-P 4'-kinase J151_02249 PF02348 Cytidylyltransferase J151_02250 PF01451 Low molecular weight phosphotyrosine protein phosphatase J151_02252 PF08459 UvrC Helix-hairpin-helix N-terminal J151_02252 PF02151 UvrB/uvrC motif J151_02252 PF01541 GIY-YIG catalytic domain J151_02253 PF01066 CDP-alcohol phosphatidyltransferase J151_02257 PF00550 Phosphopantetheine attachment site J151_02257 PF00668 Condensation domain J151_02257 PF13193 AMP-binding enzyme C-terminal domain J151_02257 PF00501 AMP-binding enzyme J151_02258 PF00975 Thioesterase domain J151_02258 PF00501 AMP-binding enzyme J151_02258 PF13193 AMP-binding enzyme C-terminal domain J151_02258 PF00550 Phosphopantetheine attachment site J151_02258 PF00668 Condensation domain J151_02260 PF01527 Transposase J151_02262 PF01527 Transposase J151_02263 PF00589 Phage integrase family J151_02265 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J151_02265 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J151_02265 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J151_02267 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J151_02270 PF00072 Response regulator receiver domain J151_02270 PF00196 Bacterial regulatory proteins, luxR family J151_02271 PF12111 Polyribonucleotide phosphorylase C terminal J151_02271 PF00575 S1 RNA binding domain J151_02271 PF10150 Ribonuclease E/G family J151_02272 PF00849 RNA pseudouridylate synthase J151_02272 PF01479 S4 domain J151_02273 PF11737 Protein of unknown function (DUF3300) J151_02274 PF02535 ZIP Zinc transporter J151_02276 PF01329 Pterin 4 alpha carbinolamine dehydratase J151_02277 PF01106 NifU-like domain J151_02288 PF00106 short chain dehydrogenase J151_02293 PF01527 Transposase J151_02294 PF01494 FAD binding domain J151_02295 PF09335 SNARE associated Golgi protein J151_02297 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J151_02298 PF07995 Glucose / Sorbosone dehydrogenase J151_02300 PF00144 Beta-lactamase J151_02301 PF04397 LytTr DNA-binding domain J151_02301 PF00072 Response regulator receiver domain J151_02302 PF07694 5TMR of 5TMR-LYT J151_02302 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_02302 PF06580 Histidine kinase J151_02304 PF00082 Subtilase family J151_02304 PF03797 Autotransporter beta-domain J151_02305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J151_02306 PF00873 AcrB/AcrD/AcrF family J151_02308 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_02308 PF13426 PAS domain J151_02308 PF08448 PAS fold J151_02308 PF00512 His Kinase A (phospho-acceptor) domain J151_02308 PF00072 Response regulator receiver domain J151_02309 PF00072 Response regulator receiver domain J151_02309 PF00196 Bacterial regulatory proteins, luxR family J151_02310 PF12951 Passenger-associated-transport-repeat J151_02310 PF12951 Passenger-associated-transport-repeat J151_02311 PF00563 EAL domain J151_02311 PF08448 PAS fold J151_02311 PF08447 PAS fold J151_02311 PF00990 Diguanylate cyclase, GGDEF domain J151_02314 PF05974 Domain of unknown function (DUF892) J151_02316 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J151_02318 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J151_02318 PF14824 Sirohaem biosynthesis protein central J151_02318 PF10414 Sirohaem synthase dimerisation region J151_02321 PF05977 Transmembrane secretion effector J151_02322 PF07969 Amidohydrolase family J151_02324 PF00857 Isochorismatase family J151_02327 PF00196 Bacterial regulatory proteins, luxR family J151_02327 PF00072 Response regulator receiver domain J151_02330 PF03466 LysR substrate binding domain J151_02330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J151_02331 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus J151_02331 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J151_02331 PF00361 Proton-conducting membrane transporter J151_02332 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) J151_02334 PF01527 Transposase J151_02335 PF01381 Helix-turn-helix J151_02336 PF05284 Protein of unknown function (DUF736) J151_02337 PF04002 RadC-like JAB domain J151_02342 PF00589 Phage integrase family J151_02342 PF13356 Arm DNA-binding domain J151_02345 PF07715 TonB-dependent Receptor Plug Domain J151_02345 PF00593 TonB dependent receptor J151_02349 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin J151_02354 PF07715 TonB-dependent Receptor Plug Domain J151_02354 PF00593 TonB dependent receptor J151_02357 PF10947 Protein of unknown function (DUF2628) J151_02359 PF00722 Glycosyl hydrolases family 16 J151_02359 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) J151_02364 PF03412 Peptidase C39 family J151_02364 PF00005 ABC transporter J151_02364 PF00664 ABC transporter transmembrane region J151_02366 PF13614 AAA domain J151_02374 PF01751 Toprim domain J151_02374 PF01131 DNA topoisomerase J151_02375 PF00145 C-5 cytosine-specific DNA methylase J151_02387 PF17761 DUF1016 N-terminal domain J151_02387 PF06250 YhcG PDDEXK nuclease domain J151_02388 PF01527 Transposase J151_02390 PF00892 EamA-like transporter family J151_02391 PF00892 EamA-like transporter family J151_02393 PF02525 Flavodoxin-like fold J151_02394 PF00043 Glutathione S-transferase, C-terminal domain J151_02394 PF02798 Glutathione S-transferase, N-terminal domain J151_02395 PF05544 Proline racemase J151_02396 PF03358 NADPH-dependent FMN reductase J151_02398 PF07690 Major Facilitator Superfamily J151_02399 PF02311 AraC-like ligand binding domain J151_02399 PF12833 Helix-turn-helix domain J151_02430 PF00580 UvrD/REP helicase N-terminal domain J151_02430 PF13361 UvrD-like helicase C-terminal domain J151_02430 PF12462 DNA helicase IV / RNA helicase N terminal J151_02445 PF03466 LysR substrate binding domain J151_02445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J151_02446 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J151_02446 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J151_02447 PF03401 Tripartite tricarboxylate transporter family receptor J151_02451 PF04002 RadC-like JAB domain J151_02458 PF13356 Arm DNA-binding domain J151_02458 PF00589 Phage integrase family J151_02459 PF02540 NAD synthase J151_02459 PF00958 GMP synthase C terminal domain J151_02459 PF00117 Glutamine amidotransferase class-I J151_02460 PF00478 IMP dehydrogenase / GMP reductase domain J151_02460 PF00571 CBS domain J151_02461 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain J151_02461 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain J151_02463 PF00999 Sodium/hydrogen exchanger family J151_02463 PF02254 TrkA-N domain J151_02464 PF00483 Nucleotidyl transferase J151_02465 PF02719 Polysaccharide biosynthesis protein J151_02466 PF00953 Glycosyl transferase family 4 J151_02467 PF18073 Rubredoxin metal binding domain J151_02469 PF00216 Bacterial DNA-binding protein J151_02470 PF00575 S1 RNA binding domain J151_02471 PF02224 Cytidylate kinase J151_02472 PF00444 Ribosomal protein L36 J151_02475 PF04371 Porphyromonas-type peptidyl-arginine deiminase J151_02476 PF00795 Carbon-nitrogen hydrolase J151_02481 PF00528 Binding-protein-dependent transport system inner membrane component J151_02482 PF00528 Binding-protein-dependent transport system inner membrane component J151_02486 PF00356 Bacterial regulatory proteins, lacI family J151_02488 PF03795 YCII-related domain J151_02489 PF02616 Segregation and condensation protein ScpA J151_02490 PF04079 Segregation and condensation complex subunit ScpB J151_02491 PF00849 RNA pseudouridylate synthase J151_02491 PF01479 S4 domain J151_02494 PF00795 Carbon-nitrogen hydrolase J151_02495 PF00155 Aminotransferase class I and II J151_02496 PF00005 ABC transporter J151_02497 PF03379 CcmB protein J151_02498 PF01578 Cytochrome C assembly protein J151_02500 PF03100 CcmE J151_02501 PF01578 Cytochrome C assembly protein J151_02501 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal J151_02502 PF08534 Redoxin J151_02503 PF03918 Cytochrome C biogenesis protein J151_02505 PF00561 alpha/beta hydrolase fold J151_02506 PF00313 'Cold-shock' DNA-binding domain J151_02507 PF00005 ABC transporter J151_02507 PF00664 ABC transporter transmembrane region J151_02508 PF00664 ABC transporter transmembrane region J151_02508 PF00005 ABC transporter J151_02509 PF01654 Cytochrome bd terminal oxidase subunit I J151_02510 PF02322 Cytochrome bd terminal oxidase subunit II J151_02514 PF02129 X-Pro dipeptidyl-peptidase (S15 family) J151_02514 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain J151_02515 PF00171 Aldehyde dehydrogenase family J151_02516 PF00696 Amino acid kinase family J151_02516 PF01472 PUA domain J151_02518 PF00206 Lyase J151_02519 PF01118 Semialdehyde dehydrogenase, NAD binding domain J151_02521 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase J151_02521 PF00696 Amino acid kinase family J151_02524 PF00764 Arginosuccinate synthase J151_02525 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J151_02525 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J151_02527 PF09190 DALR domain J151_02527 PF01406 tRNA synthetases class I (C) catalytic domain J151_02528 PF02657 Fe-S metabolism associated domain J151_02530 PF01258 Prokaryotic dksA/traR C4-type zinc finger J151_02531 PF01809 Putative membrane protein insertion efficiency factor J151_02532 PF01979 Amidohydrolase family J151_02533 PF08460 Bacterial SH3 domain J151_02533 PF01551 Peptidase family M23 J151_02536 PF06751 Ethanolamine ammonia lyase large subunit (EutB) J151_02537 PF05985 Ethanolamine ammonia-lyase light chain (EutC) J151_02539 PF00753 Metallo-beta-lactamase superfamily J151_02543 PF01527 Transposase J151_02546 PF00295 Glycosyl hydrolases family 28 J151_02548 PF13419 Haloacid dehalogenase-like hydrolase J151_02550 PF01979 Amidohydrolase family J151_02552 PF09285 Elongation factor P, C-terminal J151_02552 PF08207 Elongation factor P (EF-P) KOW-like domain J151_02552 PF01132 Elongation factor P (EF-P) OB domain J151_02553 PF04055 Radical SAM superfamily J151_02554 PF00563 EAL domain J151_02554 PF03707 Bacterial signalling protein N terminal repeat J151_02554 PF13188 PAS domain J151_02554 PF00990 Diguanylate cyclase, GGDEF domain J151_02556 PF00588 SpoU rRNA Methylase family J151_02557 PF00459 Inositol monophosphatase family J151_02558 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J151_02558 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J151_02559 PF00545 ribonuclease J151_02562 PF00271 Helicase conserved C-terminal domain J151_02562 PF00270 DEAD/DEAH box helicase J151_02562 PF03880 DbpA RNA binding domain J151_02563 PF00156 Phosphoribosyl transferase domain J151_02564 PF02696 Uncharacterized ACR, YdiU/UPF0061 family J151_02565 PF00135 Carboxylesterase family J151_02566 PF14497 Glutathione S-transferase, C-terminal domain J151_02566 PF02798 Glutathione S-transferase, N-terminal domain J151_02567 PF00313 'Cold-shock' DNA-binding domain J151_02568 PF07152 YaeQ protein J151_02570 PF00072 Response regulator receiver domain J151_02570 PF00563 EAL domain J151_02570 PF00990 Diguanylate cyclase, GGDEF domain J151_02571 PF01435 Peptidase family M48 J151_02572 PF00749 tRNA synthetases class I (E and Q), catalytic domain J151_02573 PF00106 short chain dehydrogenase J151_02574 PF05233 PHB accumulation regulatory domain J151_02574 PF07879 PHB/PHA accumulation regulator DNA-binding domain J151_02577 PF01119 DNA mismatch repair protein, C-terminal domain J151_02577 PF08676 MutL C terminal dimerisation domain J151_02578 PF01520 N-acetylmuramoyl-L-alanine amidase J151_02578 PF11741 AMIN domain J151_02579 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE J151_02580 PF01256 Carbohydrate kinase J151_02580 PF03853 YjeF-related protein N-terminus J151_02581 PF08331 Domain of unknown function (DUF1730) J151_02582 PF13742 OB-fold nucleic acid binding domain J151_02582 PF02601 Exonuclease VII, large subunit J151_02584 PF03781 Sulfatase-modifying factor enzyme 1 J151_02585 PF01612 3'-5' exonuclease J151_02585 PF00570 HRDC domain J151_02587 PF13298 DNA polymerase Ligase (LigD) J151_02587 PF01068 ATP dependent DNA ligase domain J151_02587 PF04679 ATP dependent DNA ligase C terminal region J151_02591 PF00589 Phage integrase family J151_02595 PF05598 Transposase domain (DUF772) J151_02597 PF01527 Transposase J151_02601 PF14850 DNA-binding domain of Proline dehydrogenase J151_02601 PF00171 Aldehyde dehydrogenase family J151_02601 PF01619 Proline dehydrogenase J151_02601 PF18327 Proline utilization A proline dehydrogenase N-terminal domain J151_02603 PF01527 Transposase J151_02605 PF13276 HTH-like domain J151_02605 PF13333 Integrase core domain J151_02605 PF00665 Integrase core domain J151_02607 PF02796 Helix-turn-helix domain of resolvase J151_02607 PF00239 Resolvase, N terminal domain J151_02610 PF02384 N-6 DNA Methylase J151_02611 PF09572 XamI restriction endonuclease J151_02623 PF01584 CheW-like domain J151_02624 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J151_02624 PF00672 HAMP domain J151_02624 PF12729 Four helix bundle sensory module for signal transduction J151_02625 PF02245 Methylpurine-DNA glycosylase (MPG) J151_02626 PF00271 Helicase conserved C-terminal domain J151_02626 PF08494 DEAD/H associated J151_02626 PF00270 DEAD/DEAH box helicase J151_02629 PF04386 Stringent starvation protein B J151_02630 PF00043 Glutathione S-transferase, C-terminal domain J151_02630 PF02798 Glutathione S-transferase, N-terminal domain J151_02631 PF02167 Cytochrome C1 family J151_02632 PF00033 Cytochrome b/b6/petB J151_02632 PF00032 Cytochrome b(C-terminal)/b6/petD J151_02633 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal J151_02633 PF00355 Rieske [2Fe-2S] domain J151_02634 PF01464 Transglycosylase SLT domain J151_02637 PF04055 Radical SAM superfamily J151_02637 PF01938 TRAM domain J151_02637 PF00919 Uncharacterized protein family UPF0004 J151_02638 PF02562 PhoH-like protein J151_02640 PF02130 Uncharacterized protein family UPF0054 J151_02642 PF03471 Transporter associated domain J151_02642 PF00571 CBS domain J151_02645 PF00171 Aldehyde dehydrogenase family J151_02646 PF00528 Binding-protein-dependent transport system inner membrane component J151_02647 PF00528 Binding-protein-dependent transport system inner membrane component J151_02648 PF00005 ABC transporter J151_02648 PF08402 TOBE domain J151_02649 PF02321 Outer membrane efflux protein J151_02650 PF07690 Major Facilitator Superfamily J151_02651 PF13533 Biotin-lipoyl like J151_02652 PF13416 Bacterial extracellular solute-binding protein J151_02653 PF00202 Aminotransferase class-III J151_02654 PF00120 Glutamine synthetase, catalytic domain J151_02655 PF07722 Peptidase C26 J151_02656 PF00120 Glutamine synthetase, catalytic domain J151_02657 PF01266 FAD dependent oxidoreductase J151_02658 PF00990 Diguanylate cyclase, GGDEF domain J151_02658 PF00072 Response regulator receiver domain J151_02659 PF01814 Hemerythrin HHE cation binding domain J151_02660 PF07690 Major Facilitator Superfamily J151_02660 PF00083 Sugar (and other) transporter J151_02662 PF00384 Molybdopterin oxidoreductase J151_02663 PF02634 FdhD/NarQ family J151_02664 PF07690 Major Facilitator Superfamily J151_02665 PF00202 Aminotransferase class-III J151_02667 PF04286 Protein of unknown function (DUF445) J151_02668 PF00072 Response regulator receiver domain J151_02668 PF01627 Hpt domain J151_02668 PF00512 His Kinase A (phospho-acceptor) domain J151_02668 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_02668 PF00672 HAMP domain J151_02668 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J151_02669 PF00072 Response regulator receiver domain J151_02670 PF07690 Major Facilitator Superfamily J151_02671 PF05088 Bacterial NAD-glutamate dehydrogenase J151_02673 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J151_02673 PF00529 HlyD membrane-fusion protein of T1SS J151_02674 PF00873 AcrB/AcrD/AcrF family J151_02675 PF00356 Bacterial regulatory proteins, lacI family J151_02676 PF02896 PEP-utilising enzyme, TIM barrel domain J151_02676 PF00381 PTS HPr component phosphorylation site J151_02676 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J151_02676 PF00391 PEP-utilising enzyme, mobile domain J151_02676 PF05524 PEP-utilising enzyme, N-terminal J151_02677 PF00294 pfkB family carbohydrate kinase J151_02678 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J151_02686 PF02355 Protein export membrane protein J151_02686 PF07549 SecD/SecF GG Motif J151_02687 PF02355 Protein export membrane protein J151_02687 PF13721 SecD export protein N-terminal TM region J151_02687 PF07549 SecD/SecF GG Motif J151_02688 PF02699 Preprotein translocase subunit J151_02689 PF01702 Queuine tRNA-ribosyltransferase J151_02690 PF02547 Queuosine biosynthesis protein J151_02699 PF02927 Cellulase N-terminal ig-like domain J151_02699 PF00759 Glycosyl hydrolase family 9 J151_02701 PF00037 4Fe-4S binding domain J151_02704 PF01467 Cytidylyltransferase-like J151_02706 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_02706 PF00183 Hsp90 protein J151_02710 PF00593 TonB dependent receptor J151_02710 PF07715 TonB-dependent Receptor Plug Domain J151_02712 PF04616 Glycosyl hydrolases family 43 J151_02713 PF07532 Bacterial Ig-like domain (group 4) J151_02714 PF07715 TonB-dependent Receptor Plug Domain J151_02714 PF00593 TonB dependent receptor J151_02716 PF00082 Subtilase family J151_02716 PF09286 Pro-kumamolisin, activation domain J151_02722 PF13520 Amino acid permease J151_02725 PF00557 Metallopeptidase family M24 J151_02725 PF01321 Creatinase/Prolidase N-terminal domain J151_02726 PF00171 Aldehyde dehydrogenase family J151_02727 PF00701 Dihydrodipicolinate synthetase family J151_02728 PF04324 BFD-like [2Fe-2S] binding domain J151_02728 PF07992 Pyridine nucleotide-disulphide oxidoreductase J151_02730 PF01266 FAD dependent oxidoreductase J151_02731 PF05544 Proline racemase J151_02733 PF00448 SRP54-type protein, GTPase domain J151_02733 PF02881 SRP54-type protein, helical bundle domain J151_02734 PF00633 Helix-hairpin-helix motif J151_02734 PF10576 Iron-sulfur binding domain of endonuclease III J151_02734 PF14815 NUDIX domain J151_02734 PF00730 HhH-GPD superfamily base excision DNA repair protein J151_02735 PF04362 Bacterial Fe(2+) trafficking J151_02736 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_02736 PF13426 PAS domain J151_02736 PF00072 Response regulator receiver domain J151_02742 PF08212 Lipocalin-like domain J151_02744 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J151_02744 PF12806 Acetyl-CoA dehydrogenase C-terminal like J151_02744 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J151_02744 PF02770 Acyl-CoA dehydrogenase, middle domain J151_02746 PF02779 Transketolase, pyrimidine binding domain J151_02746 PF02780 Transketolase, C-terminal domain J151_02746 PF13292 1-deoxy-D-xylulose-5-phosphate synthase J151_02750 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family J151_02751 PF16123 Hydroxyacylglutathione hydrolase C-terminus J151_02751 PF00753 Metallo-beta-lactamase superfamily J151_02752 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J151_02752 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J151_02755 PF03808 Glycosyl transferase WecB/TagA/CpsF family J151_02758 PF14667 Polysaccharide biosynthesis C-terminal domain J151_02760 PF00534 Glycosyl transferases group 1 J151_02760 PF13439 Glycosyltransferase Family 4 J151_02764 PF02397 Bacterial sugar transferase J151_02768 PF13411 MerR HTH family regulatory protein J151_02769 PF00216 Bacterial DNA-binding protein J151_02770 PF03147 Ferredoxin-fold anticodon binding domain J151_02770 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain J151_02770 PF03484 tRNA synthetase B5 domain J151_02770 PF03483 B3/4 domain J151_02770 PF01588 Putative tRNA binding domain J151_02771 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain J151_02771 PF01409 tRNA synthetases class II core domain (F) J151_02772 PF00453 Ribosomal protein L20 J151_02773 PF01632 Ribosomal protein L35 J151_02775 PF05198 Translation initiation factor IF-3, N-terminal domain J151_02775 PF00707 Translation initiation factor IF-3, C-terminal domain J151_02776 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J151_02776 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J151_02776 PF03129 Anticodon binding domain J151_02776 PF02824 TGS domain J151_02777 PF00356 Bacterial regulatory proteins, lacI family J151_02778 PF00686 Starch binding domain J151_02778 PF00128 Alpha amylase, catalytic domain J151_02779 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J151_02781 PF10566 Glycoside hydrolase 97 J151_02781 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation J151_02781 PF14508 Glycosyl-hydrolase 97 N-terminal J151_02785 PF00128 Alpha amylase, catalytic domain J151_02787 PF01527 Transposase J151_02796 PF03135 CagE, TrbE, VirB family, component of type IV transporter system J151_02799 PF01464 Transglycosylase SLT domain J151_02800 PF00437 Type II/IV secretion system protein J151_02801 PF03743 Bacterial conjugation TrbI-like protein J151_02805 PF02534 Type IV secretory system Conjugative DNA transfer J151_02808 PF12344 Ultra-violet resistance protein B J151_02808 PF04851 Type III restriction enzyme, res subunit J151_02808 PF00271 Helicase conserved C-terminal domain J151_02808 PF17757 UvrB interaction domain J151_02808 PF02151 UvrB/uvrC motif J151_02816 PF01527 Transposase J151_02825 PF01555 DNA methylase J151_02835 PF00182 Chitinase class I J151_02846 PF01527 Transposase J151_02847 PF07963 Prokaryotic N-terminal methylation motif J151_02847 PF00114 Pilin (bacterial filament) J151_02848 PF05567 Neisseria PilC beta-propeller domain J151_02851 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_02851 PF07694 5TMR of 5TMR-LYT J151_02851 PF06580 Histidine kinase J151_02852 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases J151_02852 PF03641 Possible lysine decarboxylase J151_02852 PF11892 Domain of unknown function (DUF3412) J151_02853 PF00593 TonB dependent receptor J151_02854 PF01914 MarC family integral membrane protein J151_02856 PF00462 Glutaredoxin J151_02857 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J151_02857 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J151_02858 PF02222 ATP-grasp domain J151_02858 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain J151_02859 PF00731 AIR carboxylase J151_02861 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain J151_02861 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain J151_02863 PF03725 3' exoribonuclease family, domain 2 J151_02863 PF00575 S1 RNA binding domain J151_02863 PF01138 3' exoribonuclease family, domain 1 J151_02863 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain J151_02863 PF00013 KH domain J151_02864 PF00312 Ribosomal protein S15 J151_02865 PF01509 TruB family pseudouridylate synthase (N terminal domain) J151_02865 PF09157 Pseudouridine synthase II TruB, C-terminal J151_02865 PF16198 tRNA pseudouridylate synthase B C-terminal domain J151_02866 PF02033 Ribosome-binding factor A J151_02867 PF11987 Translation-initiation factor 2 J151_02867 PF04760 Translation initiation factor IF-2, N-terminal region J151_02867 PF00009 Elongation factor Tu GTP binding domain J151_02867 PF08364 Bacterial translation initiation factor IF-2 associated region J151_02868 PF08529 NusA N-terminal domain J151_02868 PF13184 NusA-like KH domain J151_02868 PF00575 S1 RNA binding domain J151_02869 PF02576 RimP N-terminal domain J151_02869 PF17384 RimP C-terminal SH3 domain J151_02871 PF00361 Proton-conducting membrane transporter J151_02872 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus J151_02872 PF00361 Proton-conducting membrane transporter J151_02873 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J151_02873 PF00361 Proton-conducting membrane transporter J151_02874 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J151_02875 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 J151_02876 PF12838 4Fe-4S dicluster domain J151_02877 PF00146 NADH dehydrogenase J151_02878 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal J151_02878 PF00384 Molybdopterin oxidoreductase J151_02878 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J151_02879 PF10531 SLBB domain J151_02879 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J151_02879 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J151_02881 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit J151_02882 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit J151_02883 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit J151_02884 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 J151_02887 PF00121 Triosephosphate isomerase J151_02888 PF00106 short chain dehydrogenase J151_02891 PF03707 Bacterial signalling protein N terminal repeat J151_02891 PF00990 Diguanylate cyclase, GGDEF domain J151_02891 PF00563 EAL domain J151_02894 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J151_02894 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J151_02894 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J151_02894 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J151_02895 PF01039 Carboxyl transferase domain J151_02895 PF17848 Acetyl-coA carboxylase zinc finger domain J151_02896 PF00290 Tryptophan synthase alpha chain J151_02898 PF00291 Pyridoxal-phosphate dependent enzyme J151_02899 PF03466 LysR substrate binding domain J151_02899 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J151_02900 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase J151_02901 PF01416 tRNA pseudouridine synthase J151_02905 PF02774 Semialdehyde dehydrogenase, dimerisation domain J151_02905 PF01118 Semialdehyde dehydrogenase, NAD binding domain J151_02906 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J151_02906 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J151_02907 PF01264 Chorismate synthase J151_02908 PF05175 Methyltransferase small domain J151_02909 PF02630 SCO1/SenC J151_02910 PF02666 Phosphatidylserine decarboxylase J151_02912 PF05872 Bacterial protein of unknown function (DUF853) J151_02913 PF00293 NUDIX domain J151_02916 PF03449 Transcription elongation factor, N-terminal J151_02916 PF01272 Transcription elongation factor, GreA/GreB, C-term J151_02917 PF04055 Radical SAM superfamily J151_02917 PF18693 TRAM domain J151_02917 PF00919 Uncharacterized protein family UPF0004 J151_02918 PF01738 Dienelactone hydrolase family J151_02922 PF00692 dUTPase J151_02923 PF10609 NUBPL iron-transfer P-loop NTPase J151_02924 PF07715 TonB-dependent Receptor Plug Domain J151_02924 PF00593 TonB dependent receptor J151_02927 PF01431 Peptidase family M13 J151_02927 PF05649 Peptidase family M13 J151_02928 PF01431 Peptidase family M13 J151_02928 PF05649 Peptidase family M13 J151_02931 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J151_02932 PF07992 Pyridine nucleotide-disulphide oxidoreductase J151_02932 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J151_02933 PF01266 FAD dependent oxidoreductase J151_02934 PF04235 Protein of unknown function (DUF418) J151_02935 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J151_02936 PF00877 NlpC/P60 family J151_02937 PF00877 NlpC/P60 family J151_02940 PF00375 Sodium:dicarboxylate symporter family J151_02941 PF00245 Alkaline phosphatase J151_02942 PF09179 TilS substrate binding domain J151_02942 PF11734 TilS substrate C-terminal domain J151_02942 PF01171 PP-loop family J151_02943 PF02609 Exonuclease VII small subunit J151_02944 PF00348 Polyprenyl synthetase J151_02945 PF14521 Lysine-specific metallo-endopeptidase J151_02947 PF01523 Putative modulator of DNA gyrase J151_02948 PF04751 Protein of unknown function (DUF615) J151_02949 PF01523 Putative modulator of DNA gyrase J151_02951 PF13116 Protein of unknown function J151_02951 PF13502 AsmA-like C-terminal region J151_02952 PF10150 Ribonuclease E/G family J151_02952 PF00575 S1 RNA binding domain J151_02953 PF02545 Maf-like protein J151_02954 PF04402 Protein of unknown function (DUF541) J151_02957 PF02590 Predicted SPOUT methyltransferase J151_02960 PF01467 Cytidylyltransferase-like J151_02963 PF00133 tRNA synthetases class I (I, L, M and V) J151_02963 PF13603 Leucyl-tRNA synthetase, Domain 2 J151_02963 PF08264 Anticodon-binding domain of tRNA J151_02965 PF00085 Thioredoxin J151_02970 PF04070 Domain of unknown function (DUF378) J151_02971 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J151_02973 PF03466 LysR substrate binding domain J151_02973 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J151_02978 PF00664 ABC transporter transmembrane region J151_02978 PF00005 ABC transporter J151_02981 PF00873 AcrB/AcrD/AcrF family J151_02984 PF02321 Outer membrane efflux protein J151_02985 PF00486 Transcriptional regulatory protein, C terminal J151_02985 PF00072 Response regulator receiver domain J151_02986 PF00672 HAMP domain J151_02986 PF00512 His Kinase A (phospho-acceptor) domain J151_02986 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_02987 PF00999 Sodium/hydrogen exchanger family J151_02988 PF00144 Beta-lactamase J151_02989 PF03737 Aldolase/RraA J151_02992 PF00990 Diguanylate cyclase, GGDEF domain J151_02992 PF00072 Response regulator receiver domain J151_02993 PF01479 S4 domain J151_02993 PF00849 RNA pseudouridylate synthase J151_02994 PF00563 EAL domain J151_02994 PF00990 Diguanylate cyclase, GGDEF domain J151_02994 PF08448 PAS fold J151_02995 PF03880 DbpA RNA binding domain J151_02995 PF00270 DEAD/DEAH box helicase J151_02995 PF00271 Helicase conserved C-terminal domain J151_03005 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J151_03005 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J151_03007 PF00654 Voltage gated chloride channel J151_03008 PF08240 Alcohol dehydrogenase GroES-like domain J151_03008 PF00107 Zinc-binding dehydrogenase J151_03011 PF00593 TonB dependent receptor J151_03011 PF07715 TonB-dependent Receptor Plug Domain J151_03013 PF01483 Proprotein convertase P-domain J151_03013 PF00082 Subtilase family J151_03016 PF01483 Proprotein convertase P-domain J151_03016 PF00082 Subtilase family J151_03018 PF00248 Aldo/keto reductase family J151_03019 PF07690 Major Facilitator Superfamily J151_03020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J151_03020 PF03466 LysR substrate binding domain J151_03022 PF12833 Helix-turn-helix domain J151_03022 PF06719 AraC-type transcriptional regulator N-terminus J151_03024 PF16859 Tetracyclin repressor-like, C-terminal domain J151_03024 PF00440 Bacterial regulatory proteins, tetR family J151_03025 PF02321 Outer membrane efflux protein J151_03026 PF00873 AcrB/AcrD/AcrF family J151_03027 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J151_03027 PF00529 HlyD membrane-fusion protein of T1SS J151_03029 PF01475 Ferric uptake regulator family J151_03030 PF00749 tRNA synthetases class I (E and Q), catalytic domain J151_03035 PF06123 Inner membrane protein CreD J151_03037 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_03037 PF00672 HAMP domain J151_03037 PF00512 His Kinase A (phospho-acceptor) domain J151_03038 PF00072 Response regulator receiver domain J151_03038 PF00486 Transcriptional regulatory protein, C terminal J151_03039 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ J151_03041 PF00270 DEAD/DEAH box helicase J151_03041 PF03461 TRCF domain J151_03041 PF00271 Helicase conserved C-terminal domain J151_03041 PF17757 UvrB interaction domain J151_03041 PF02559 CarD-like/TRCF domain J151_03048 PF01584 CheW-like domain J151_03048 PF09078 CheY binding J151_03048 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_03048 PF01627 Hpt domain J151_03048 PF02895 Signal transducing histidine kinase, homodimeric domain J151_03049 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J151_03049 PF00672 HAMP domain J151_03049 PF02203 Tar ligand binding domain homologue J151_03050 PF01584 CheW-like domain J151_03051 PF00563 EAL domain J151_03051 PF13426 PAS domain J151_03051 PF00990 Diguanylate cyclase, GGDEF domain J151_03052 PF01739 CheR methyltransferase, SAM binding domain J151_03052 PF03705 CheR methyltransferase, all-alpha domain J151_03053 PF01339 CheB methylesterase J151_03053 PF00072 Response regulator receiver domain J151_03054 PF13091 PLD-like domain J151_03055 PF01431 Peptidase family M13 J151_03055 PF05649 Peptidase family M13 J151_03057 PF00300 Histidine phosphatase superfamily (branch 1) J151_03058 PF04493 Endonuclease V J151_03060 PF05726 Pirin C-terminal cupin domain J151_03060 PF02678 Pirin J151_03063 PF05726 Pirin C-terminal cupin domain J151_03063 PF02678 Pirin J151_03064 PF02554 Carbon starvation protein CstA J151_03064 PF13722 5TM C-terminal transporter carbon starvation CstA J151_03065 PF04328 Selenoprotein, putative J151_03074 PF01527 Transposase J151_03076 PF02625 XdhC and CoxI family J151_03076 PF13478 XdhC Rossmann domain J151_03077 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J151_03077 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J151_03078 PF00941 FAD binding domain in molybdopterin dehydrogenase J151_03078 PF03450 CO dehydrogenase flavoprotein C-terminal domain J151_03079 PF10518 TAT (twin-arginine translocation) pathway signal sequence J151_03079 PF00111 2Fe-2S iron-sulfur cluster binding domain J151_03079 PF01799 [2Fe-2S] binding domain J151_03080 PF00550 Phosphopantetheine attachment site J151_03080 PF08240 Alcohol dehydrogenase GroES-like domain J151_03080 PF08659 KR domain J151_03080 PF00109 Beta-ketoacyl synthase, N-terminal domain J151_03080 PF16197 Ketoacyl-synthetase C-terminal extension J151_03080 PF02801 Beta-ketoacyl synthase, C-terminal domain J151_03080 PF08990 Erythronolide synthase docking J151_03080 PF14765 Polyketide synthase dehydratase J151_03080 PF00698 Acyl transferase domain J151_03080 PF09277 Erythronolide synthase, docking J151_03081 PF00563 EAL domain J151_03081 PF01590 GAF domain J151_03081 PF00990 Diguanylate cyclase, GGDEF domain J151_03081 PF00360 Phytochrome region J151_03084 PF02384 N-6 DNA Methylase J151_03084 PF12161 HsdM N-terminal domain J151_03090 PF00436 Single-strand binding protein family J151_03091 PF00348 Polyprenyl synthetase J151_03093 PF08245 Mur ligase middle domain J151_03093 PF02875 Mur ligase family, glutamate ligase domain J151_03096 PF01842 ACT domain J151_03096 PF00696 Amino acid kinase family J151_03097 PF02567 Phenazine biosynthesis-like protein J151_03098 PF02567 Phenazine biosynthesis-like protein J151_03100 PF02566 OsmC-like protein J151_03101 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J151_03101 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J151_03102 PF03652 Holliday junction resolvase J151_03103 PF02622 Uncharacterized ACR, COG1678 J151_03104 PF13673 Acetyltransferase (GNAT) domain J151_03104 PF00117 Glutamine amidotransferase class-I J151_03104 PF03352 Methyladenine glycosylase J151_03104 PF13302 Acetyltransferase (GNAT) domain J151_03104 PF00958 GMP synthase C terminal domain J151_03107 PF03211 Pectate lyase J151_03108 PF00437 Type II/IV secretion system protein J151_03109 PF00437 Type II/IV secretion system protein J151_03110 PF01168 Alanine racemase, N-terminal domain J151_03111 PF14748 Pyrroline-5-carboxylate reductase dimerisation J151_03111 PF03807 NADP oxidoreductase coenzyme F420-dependent J151_03113 PF01551 Peptidase family M23 J151_03117 PF01965 DJ-1/PfpI family J151_03119 PF02082 Transcriptional regulator J151_03120 PF01458 Uncharacterized protein family (UPF0051) J151_03121 PF00005 ABC transporter J151_03122 PF01458 Uncharacterized protein family (UPF0051) J151_03123 PF00266 Aminotransferase class-V J151_03125 PF00355 Rieske [2Fe-2S] domain J151_03126 PF00593 TonB dependent receptor J151_03126 PF07715 TonB-dependent Receptor Plug Domain J151_03127 PF18331 PKHD-type hydroxylase C-terminal domain J151_03127 PF13640 2OG-Fe(II) oxygenase superfamily J151_03132 PF02424 ApbE family J151_03133 PF00175 Oxidoreductase NAD-binding domain J151_03133 PF00258 Flavodoxin J151_03133 PF00667 FAD binding domain J151_03137 PF01546 Peptidase family M20/M25/M40 J151_03137 PF07687 Peptidase dimerisation domain J151_03139 PF01636 Phosphotransferase enzyme family J151_03140 PF00483 Nucleotidyl transferase J151_03141 PF00308 Bacterial dnaA protein J151_03142 PF01594 AI-2E family transporter J151_03144 PF02769 AIR synthase related protein, C-terminal domain J151_03144 PF00586 AIR synthase related protein, N-terminal domain J151_03146 PF00551 Formyl transferase J151_03150 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J151_03151 PF01722 BolA-like protein J151_03152 PF01380 SIS domain J151_03152 PF00571 CBS domain J151_03155 PF03968 OstA-like protein J151_03156 PF00005 ABC transporter J151_03157 PF00309 Sigma-54 factor, Activator interacting domain (AID) J151_03157 PF04963 Sigma-54 factor, core binding domain J151_03157 PF04552 Sigma-54, DNA binding domain J151_03158 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J151_03159 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J151_03160 PF02603 HPr Serine kinase N terminus J151_03160 PF07475 HPr Serine kinase C-terminal domain J151_03161 PF03668 P-loop ATPase protein family J151_03163 PF00381 PTS HPr component phosphorylation site J151_03164 PF00391 PEP-utilising enzyme, mobile domain J151_03164 PF02896 PEP-utilising enzyme, TIM barrel domain J151_03164 PF05524 PEP-utilising enzyme, N-terminal J151_03165 PF01769 Divalent cation transporter J151_03165 PF00571 CBS domain J151_03165 PF03448 MgtE intracellular N domain J151_03166 PF00756 Putative esterase J151_03167 PF02322 Cytochrome bd terminal oxidase subunit II J151_03168 PF01654 Cytochrome bd terminal oxidase subunit I J151_03170 PF00324 Amino acid permease J151_03171 PF00544 Pectate lyase J151_03172 PF00561 alpha/beta hydrolase fold J151_03173 PF00196 Bacterial regulatory proteins, luxR family J151_03174 PF00324 Amino acid permease J151_03179 PF12706 Beta-lactamase superfamily domain J151_03180 PF04820 Tryptophan halogenase J151_03185 PF09278 MerR, DNA binding J151_03185 PF00376 MerR family regulatory protein J151_03186 PF07690 Major Facilitator Superfamily J151_03188 PF03738 Glutathionylspermidine synthase preATP-grasp J151_03193 PF04012 PspA/IM30 family J151_03195 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region J151_03195 PF01243 Pyridoxamine 5'-phosphate oxidase J151_03196 PF01202 Shikimate kinase J151_03197 PF01761 3-dehydroquinate synthase J151_03199 PF01208 Uroporphyrinogen decarboxylase (URO-D) J151_03212 PF00158 Sigma-54 interaction domain J151_03212 PF01590 GAF domain J151_03212 PF02954 Bacterial regulatory protein, Fis family J151_03213 PF07690 Major Facilitator Superfamily J151_03214 PF17149 Periplasmic sensor domain found in signal transduction proteins J151_03214 PF00672 HAMP domain J151_03214 PF00072 Response regulator receiver domain J151_03214 PF01627 Hpt domain J151_03214 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_03214 PF00512 His Kinase A (phospho-acceptor) domain J151_03215 PF01627 Hpt domain J151_03215 PF00512 His Kinase A (phospho-acceptor) domain J151_03215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_03215 PF00672 HAMP domain J151_03215 PF00072 Response regulator receiver domain J151_03215 PF17149 Periplasmic sensor domain found in signal transduction proteins J151_03217 PF00512 His Kinase A (phospho-acceptor) domain J151_03217 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_03217 PF01627 Hpt domain J151_03217 PF00072 Response regulator receiver domain J151_03218 PF04264 YceI-like domain J151_03222 PF03313 Serine dehydratase alpha chain J151_03222 PF03315 Serine dehydratase beta chain J151_03223 PF12697 Alpha/beta hydrolase family J151_03224 PF03447 Homoserine dehydrogenase, NAD binding domain J151_03224 PF00742 Homoserine dehydrogenase J151_03224 PF00696 Amino acid kinase family J151_03225 PF01053 Cys/Met metabolism PLP-dependent enzyme J151_03226 PF00561 alpha/beta hydrolase fold J151_03228 PF01476 LysM domain J151_03228 PF08525 Opacity-associated protein A N-terminal motif J151_03228 PF01551 Peptidase family M23 J151_03229 PF16658 Class II release factor RF3, C-terminal domain J151_03229 PF00009 Elongation factor Tu GTP binding domain J151_03230 PF03006 Haemolysin-III related J151_03231 PF05170 AsmA family J151_03232 PF00571 CBS domain J151_03232 PF00478 IMP dehydrogenase / GMP reductase domain J151_03233 PF00535 Glycosyl transferase family 2 J151_03234 PF00912 Transglycosylase J151_03235 PF01430 Hsp33 protein J151_03237 PF07715 TonB-dependent Receptor Plug Domain J151_03237 PF00593 TonB dependent receptor J151_03239 PF00440 Bacterial regulatory proteins, tetR family J151_03240 PF00561 alpha/beta hydrolase fold J151_03241 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J151_03241 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J151_03241 PF09317 Domain of unknown function (DUF1974) J151_03246 PF01597 Glycine cleavage H-protein J151_03247 PF01571 Aminomethyltransferase folate-binding domain J151_03247 PF08669 Glycine cleavage T-protein C-terminal barrel domain J151_03249 PF16200 C-terminal region of band_7 J151_03249 PF01145 SPFH domain / Band 7 family J151_03250 PF02694 Uncharacterised BCR, YnfA/UPF0060 family J151_03251 PF03819 MazG nucleotide pyrophosphohydrolase domain J151_03252 PF00459 Inositol monophosphatase family J151_03253 PF00293 NUDIX domain J151_03254 PF00202 Aminotransferase class-III J151_03255 PF04452 RNA methyltransferase J151_03256 PF02685 Glucokinase J151_03259 PF01476 LysM domain J151_03259 PF00704 Glycosyl hydrolases family 18 J151_03260 PF07691 PA14 domain J151_03260 PF02838 Glycosyl hydrolase family 20, domain 2 J151_03260 PF00728 Glycosyl hydrolase family 20, catalytic domain J151_03262 PF00933 Glycosyl hydrolase family 3 N terminal domain J151_03262 PF07691 PA14 domain J151_03262 PF14310 Fibronectin type III-like domain J151_03262 PF01915 Glycosyl hydrolase family 3 C-terminal domain J151_03264 PF01301 Glycosyl hydrolases family 35 J151_03265 PF13520 Amino acid permease J151_03267 PF11975 Family 4 glycosyl hydrolase C-terminal domain J151_03267 PF02056 Family 4 glycosyl hydrolase J151_03269 PF07971 Glycosyl hydrolase family 92 J151_03269 PF17678 Glycosyl hydrolase family 92 N-terminal domain J151_03270 PF01301 Glycosyl hydrolases family 35 J151_03276 PF03932 CutC family J151_03277 PF01112 Asparaginase J151_03278 PF13302 Acetyltransferase (GNAT) domain J151_03281 PF01584 CheW-like domain J151_03281 PF00072 Response regulator receiver domain J151_03281 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_03281 PF01627 Hpt domain J151_03282 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J151_03282 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term J151_03284 PF00072 Response regulator receiver domain J151_03285 PF00072 Response regulator receiver domain J151_03286 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain J151_03286 PF02951 Prokaryotic glutathione synthetase, N-terminal domain J151_03288 PF03747 ADP-ribosylglycohydrolase J151_03289 PF00814 Glycoprotease family J151_03290 PF13307 Helicase C-terminal domain J151_03290 PF04851 Type III restriction enzyme, res subunit J151_03292 PF00905 Penicillin binding protein transpeptidase domain J151_03292 PF14814 Bifunctional transglycosylase second domain J151_03292 PF00912 Transglycosylase J151_03293 PF00535 Glycosyl transferase family 2 J151_03295 PF04607 Region found in RelA / SpoT proteins J151_03295 PF02824 TGS domain J151_03295 PF13291 ACT domain J151_03296 PF12706 Beta-lactamase superfamily domain J151_03297 PF03070 TENA/THI-4/PQQC family J151_03298 PF05402 Coenzyme PQQ synthesis protein D (PqqD) J151_03299 PF13186 Iron-sulfur cluster-binding domain J151_03299 PF04055 Radical SAM superfamily J151_03302 PF02685 Glucokinase J151_03304 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold J151_03304 PF00270 DEAD/DEAH box helicase J151_03304 PF00271 Helicase conserved C-terminal domain J151_03304 PF04408 Helicase associated domain (HA2) J151_03304 PF11898 Domain of unknown function (DUF3418) J151_03305 PF00210 Ferritin-like domain J151_03306 PF00271 Helicase conserved C-terminal domain J151_03306 PF00570 HRDC domain J151_03306 PF16124 RecQ zinc-binding J151_03306 PF09382 RQC domain J151_03306 PF00270 DEAD/DEAH box helicase J151_03313 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J151_03313 PF00672 HAMP domain J151_03313 PF02203 Tar ligand binding domain homologue J151_03317 PF13581 Histidine kinase-like ATPase domain J151_03317 PF07536 HWE histidine kinase J151_03317 PF13426 PAS domain J151_03318 PF06508 Queuosine biosynthesis protein QueC J151_03320 PF04055 Radical SAM superfamily J151_03322 PF00691 OmpA family J151_03323 PF04052 TolB amino-terminal domain J151_03323 PF07676 WD40-like Beta Propeller Repeat J151_03325 PF02472 Biopolymer transport protein ExbD/TolR J151_03326 PF01618 MotA/TolQ/ExbB proton channel family J151_03327 PF03061 Thioesterase superfamily J151_03328 PF05491 RuvB C-terminal winged helix domain J151_03328 PF05496 Holliday junction DNA helicase RuvB P-loop domain J151_03328 PF17864 RuvB AAA lid domain J151_03330 PF02705 K+ potassium transporter J151_03331 PF01330 RuvA N terminal domain J151_03331 PF07499 RuvA, C-terminal domain J151_03332 PF02075 Crossover junction endodeoxyribonuclease RuvC J151_03333 PF01709 Transcriptional regulator J151_03336 PF00152 tRNA synthetases class II (D, K and N) J151_03336 PF02938 GAD domain J151_03336 PF01336 OB-fold nucleic acid binding domain J151_03339 PF07690 Major Facilitator Superfamily J151_03342 PF04185 Phosphoesterase family J151_03342 PF05506 Domain of unknown function (DUF756) J151_03345 PF03466 LysR substrate binding domain J151_03345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J151_03347 PF00005 ABC transporter J151_03347 PF12848 ABC transporter J151_03348 PF00593 TonB dependent receptor J151_03348 PF07715 TonB-dependent Receptor Plug Domain J151_03350 PF00593 TonB dependent receptor J151_03350 PF07715 TonB-dependent Receptor Plug Domain J151_03351 PF07715 TonB-dependent Receptor Plug Domain J151_03351 PF00593 TonB dependent receptor J151_03352 PF00067 Cytochrome P450 J151_03353 PF02254 TrkA-N domain J151_03353 PF00999 Sodium/hydrogen exchanger family J151_03358 PF00593 TonB dependent receptor J151_03358 PF07660 Secretin and TonB N terminus short domain J151_03358 PF07715 TonB-dependent Receptor Plug Domain J151_03360 PF06276 Ferric iron reductase FhuF-like transporter J151_03360 PF04183 IucA / IucC family J151_03361 PF07690 Major Facilitator Superfamily J151_03363 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J151_03363 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J151_03366 PF02654 Cobalamin-5-phosphate synthase J151_03368 PF02277 Phosphoribosyltransferase J151_03369 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase J151_03370 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J151_03370 PF07685 CobB/CobQ-like glutamine amidotransferase domain J151_03371 PF00155 Aminotransferase class I and II J151_03373 PF03186 CobD/Cbib protein J151_03373 PF17113 Regulatory signalling modulator protein AmpE J151_03374 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP J151_03374 PF12557 Cob(I)alamin adenosyltransferase N terminal J151_03377 PF07715 TonB-dependent Receptor Plug Domain J151_03377 PF00593 TonB dependent receptor J151_03379 PF17871 AAA lid domain J151_03379 PF07724 AAA domain (Cdc48 subfamily) J151_03379 PF00004 ATPase family associated with various cellular activities (AAA) J151_03379 PF10431 C-terminal, D2-small domain, of ClpB protein J151_03379 PF02861 Clp amino terminal domain, pathogenicity island component J151_03380 PF00005 ABC transporter J151_03381 PF00528 Binding-protein-dependent transport system inner membrane component J151_03382 PF09084 NMT1/THI5 like J151_03383 PF00248 Aldo/keto reductase family J151_03385 PF07715 TonB-dependent Receptor Plug Domain J151_03385 PF00593 TonB dependent receptor J151_03386 PF01541 GIY-YIG catalytic domain J151_03393 PF00593 TonB dependent receptor J151_03393 PF07715 TonB-dependent Receptor Plug Domain J151_03394 PF02358 Trehalose-phosphatase J151_03395 PF00723 Glycosyl hydrolases family 15 J151_03396 PF00982 Glycosyltransferase family 20 J151_03397 PF01011 PQQ enzyme repeat J151_03398 PF00672 HAMP domain J151_03398 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J151_03398 PF02203 Tar ligand binding domain homologue J151_03399 PF04134 Protein of unknown function, DUF393 J151_03402 PF00849 RNA pseudouridylate synthase J151_03403 PF13525 Outer membrane lipoprotein J151_03405 PF00795 Carbon-nitrogen hydrolase J151_03405 PF02540 NAD synthase J151_03407 PF01527 Transposase J151_03411 PF13406 Transglycosylase SLT domain J151_03412 PF01526 Tn3 transposase DDE domain J151_03412 PF13700 Domain of unknown function (DUF4158) J151_03416 PF01129 NAD:arginine ADP-ribosyltransferase J151_03421 PF00549 CoA-ligase J151_03421 PF02629 CoA binding domain J151_03422 PF00549 CoA-ligase J151_03422 PF08442 ATP-grasp domain J151_03423 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_03423 PF00512 His Kinase A (phospho-acceptor) domain J151_03424 PF00158 Sigma-54 interaction domain J151_03424 PF00072 Response regulator receiver domain J151_03424 PF02954 Bacterial regulatory protein, Fis family J151_03426 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J151_03426 PF00437 Type II/IV secretion system protein J151_03427 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J151_03427 PF00437 Type II/IV secretion system protein J151_03428 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J151_03428 PF00437 Type II/IV secretion system protein J151_03429 PF00114 Pilin (bacterial filament) J151_03429 PF07963 Prokaryotic N-terminal methylation motif J151_03430 PF07963 Prokaryotic N-terminal methylation motif J151_03430 PF00114 Pilin (bacterial filament) J151_03431 PF00482 Type II secretion system (T2SS), protein F J151_03432 PF06750 Bacterial Peptidase A24 N-terminal domain J151_03432 PF01478 Type IV leader peptidase family J151_03433 PF01121 Dephospho-CoA kinase J151_03436 PF01527 Transposase J151_03437 PF13276 HTH-like domain J151_03437 PF13333 Integrase core domain J151_03437 PF00665 Integrase core domain J151_03438 PF00989 PAS fold J151_03438 PF16736 Single Cache-like J151_03438 PF00512 His Kinase A (phospho-acceptor) domain J151_03438 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_03439 PF00072 Response regulator receiver domain J151_03439 PF00486 Transcriptional regulatory protein, C terminal J151_03441 PF18030 RimK PreATP-grasp domain J151_03441 PF08443 RimK-like ATP-grasp domain J151_03442 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J151_03442 PF00128 Alpha amylase, catalytic domain J151_03455 PF04002 RadC-like JAB domain J151_03460 PF00072 Response regulator receiver domain J151_03460 PF13426 PAS domain J151_03460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_03461 PF00072 Response regulator receiver domain J151_03461 PF13426 PAS domain J151_03461 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_03467 PF01527 Transposase J151_03476 PF13188 PAS domain J151_03476 PF00072 Response regulator receiver domain J151_03476 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_03476 PF00512 His Kinase A (phospho-acceptor) domain J151_03476 PF08448 PAS fold J151_03480 PF13676 TIR domain J151_03484 PF03797 Autotransporter beta-domain J151_03484 PF00657 GDSL-like Lipase/Acylhydrolase J151_03486 PF05690 Thiazole biosynthesis protein ThiG J151_03487 PF02390 Putative methyltransferase J151_03488 PF03600 Citrate transporter J151_03488 PF02080 TrkA-C domain J151_03491 PF01557 Fumarylacetoacetate (FAA) hydrolase family J151_03492 PF01741 Large-conductance mechanosensitive channel, MscL J151_03494 PF00356 Bacterial regulatory proteins, lacI family J151_03496 PF02837 Glycosyl hydrolases family 2, sugar binding domain J151_03496 PF00703 Glycosyl hydrolases family 2 J151_03496 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain J151_03497 PF10566 Glycoside hydrolase 97 J151_03497 PF14508 Glycosyl-hydrolase 97 N-terminal J151_03497 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation J151_03499 PF00135 Carboxylesterase family J151_03500 PF00588 SpoU rRNA Methylase family J151_03500 PF08032 RNA 2'-O ribose methyltransferase substrate binding J151_03502 PF01433 Peptidase family M1 domain J151_03502 PF11838 ERAP1-like C-terminal domain J151_03505 PF01527 Transposase J151_03511 PF00873 AcrB/AcrD/AcrF family J151_03512 PF00529 HlyD membrane-fusion protein of T1SS J151_03512 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J151_03513 PF00009 Elongation factor Tu GTP binding domain J151_03514 PF01507 Phosphoadenosine phosphosulfate reductase family J151_03515 PF00667 FAD binding domain J151_03515 PF00175 Oxidoreductase NAD-binding domain J151_03515 PF00258 Flavodoxin J151_03516 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J151_03516 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J151_03517 PF01507 Phosphoadenosine phosphosulfate reductase family J151_03521 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_03521 PF01627 Hpt domain J151_03521 PF00512 His Kinase A (phospho-acceptor) domain J151_03521 PF00072 Response regulator receiver domain J151_03523 PF03466 LysR substrate binding domain J151_03523 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J151_03524 PF10414 Sirohaem synthase dimerisation region J151_03524 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J151_03524 PF14824 Sirohaem biosynthesis protein central J151_03525 PF00291 Pyridoxal-phosphate dependent enzyme J151_03527 PF01661 Macro domain J151_03528 PF00274 Fructose-bisphosphate aldolase class-I J151_03529 PF00224 Pyruvate kinase, barrel domain J151_03529 PF02887 Pyruvate kinase, alpha/beta domain J151_03531 PF00162 Phosphoglycerate kinase J151_03536 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J151_03536 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J151_03538 PF03922 OmpW family J151_03539 PF03922 OmpW family J151_03541 PF04273 Putative phosphatase (DUF442) J151_03541 PF00753 Metallo-beta-lactamase superfamily J151_03543 PF00528 Binding-protein-dependent transport system inner membrane component J151_03544 PF03459 TOBE domain J151_03544 PF00005 ABC transporter J151_03551 PF03734 L,D-transpeptidase catalytic domain J151_03551 PF01476 LysM domain J151_03552 PF01551 Peptidase family M23 J151_03552 PF04225 Opacity-associated protein A LysM-like domain J151_03554 PF00593 TonB dependent receptor J151_03554 PF07715 TonB-dependent Receptor Plug Domain J151_03555 PF12146 Serine aminopeptidase, S33 J151_03556 PF00456 Transketolase, thiamine diphosphate binding domain J151_03556 PF02780 Transketolase, C-terminal domain J151_03556 PF02779 Transketolase, pyrimidine binding domain J151_03557 PF00375 Sodium:dicarboxylate symporter family J151_03559 PF07584 Aerotolerance regulator N-terminal J151_03559 PF00092 von Willebrand factor type A domain J151_03563 PF17863 AAA lid domain J151_03563 PF07726 ATPase family associated with various cellular activities (AAA) J151_03565 PF07660 Secretin and TonB N terminus short domain J151_03565 PF03958 Bacterial type II/III secretion system short domain J151_03565 PF00263 Bacterial type II and III secretion system protein J151_03565 PF11741 AMIN domain J151_03570 PF00905 Penicillin binding protein transpeptidase domain J151_03570 PF00912 Transglycosylase J151_03570 PF17092 Penicillin-binding protein OB-like domain J151_03573 PF00285 Citrate synthase, C-terminal domain J151_03574 PF01197 Ribosomal protein L31 J151_03575 PF01156 Inosine-uridine preferring nucleoside hydrolase J151_03576 PF00271 Helicase conserved C-terminal domain J151_03576 PF17191 RecG wedge domain J151_03576 PF00270 DEAD/DEAH box helicase J151_03577 PF01042 Endoribonuclease L-PSP J151_03578 PF04607 Region found in RelA / SpoT proteins J151_03578 PF02824 TGS domain J151_03578 PF13291 ACT domain J151_03579 PF01192 RNA polymerase Rpb6 J151_03580 PF00625 Guanylate kinase J151_03581 PF08340 Domain of unknown function (DUF1732) J151_03581 PF03755 YicC-like family, N-terminal region J151_03582 PF03725 3' exoribonuclease family, domain 2 J151_03582 PF01138 3' exoribonuclease family, domain 1 J151_03584 PF01725 Ham1 family J151_03585 PF06969 HemN C-terminal domain J151_03585 PF04055 Radical SAM superfamily J151_03588 PF00557 Metallopeptidase family M24 J151_03590 PF05195 Aminopeptidase P, N-terminal domain J151_03590 PF00557 Metallopeptidase family M24 J151_03591 PF03695 Uncharacterised protein family (UPF0149) J151_03593 PF05164 Cell division protein ZapA J151_03595 PF01812 5-formyltetrahydrofolate cyclo-ligase family J151_03597 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) J151_03599 PF13369 Transglutaminase-like superfamily J151_03600 PF00301 Rubredoxin J151_03601 PF02581 Thiamine monophosphate synthase J151_03604 PF00202 Aminotransferase class-III J151_03605 PF00196 Bacterial regulatory proteins, luxR family J151_03605 PF17874 MalT-like TPR region J151_03606 PF00127 Copper binding proteins, plastocyanin/azurin family J151_03607 PF00155 Aminotransferase class I and II J151_03609 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J151_03609 PF00034 Cytochrome c J151_03610 PF01593 Flavin containing amine oxidoreductase J151_03613 PF00202 Aminotransferase class-III J151_03614 PF00027 Cyclic nucleotide-binding domain J151_03614 PF00520 Ion transport protein J151_03617 PF01569 PAP2 superfamily J151_03618 PF01062 Bestrophin, RFP-TM, chloride channel J151_03620 PF08245 Mur ligase middle domain J151_03620 PF02875 Mur ligase family, glutamate ligase domain J151_03620 PF01225 Mur ligase family, catalytic domain J151_03622 PF00365 Phosphofructokinase J151_03624 PF03030 Inorganic H+ pyrophosphatase J151_03626 PF00719 Inorganic pyrophosphatase J151_03628 PF00593 TonB dependent receptor J151_03628 PF07715 TonB-dependent Receptor Plug Domain J151_03629 PF12833 Helix-turn-helix domain J151_03630 PF07676 WD40-like Beta Propeller Repeat J151_03630 PF04052 TolB amino-terminal domain J151_03631 PF18500 CadC C-terminal domain 1 J151_03631 PF00486 Transcriptional regulatory protein, C terminal J151_03632 PF01964 Radical SAM ThiC family J151_03632 PF13667 ThiC-associated domain J151_03634 PF07715 TonB-dependent Receptor Plug Domain J151_03634 PF00593 TonB dependent receptor J151_03635 PF02203 Tar ligand binding domain homologue J151_03635 PF00672 HAMP domain J151_03635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J151_03637 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain J151_03637 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain J151_03638 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J151_03638 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J151_03638 PF00205 Thiamine pyrophosphate enzyme, central domain J151_03640 PF00291 Pyridoxal-phosphate dependent enzyme J151_03641 PF00682 HMGL-like J151_03641 PF08502 LeuA allosteric (dimerisation) domain J151_03642 PF00180 Isocitrate/isopropylmalate dehydrogenase J151_03643 PF00694 Aconitase C-terminal domain J151_03644 PF00330 Aconitase family (aconitate hydratase) J151_03645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J151_03646 PF00990 Diguanylate cyclase, GGDEF domain J151_03646 PF17151 Periplasmic sensor domain J151_03649 PF02321 Outer membrane efflux protein J151_03650 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) J151_03651 PF03279 Bacterial lipid A biosynthesis acyltransferase J151_03656 PF03949 Malic enzyme, NAD binding domain J151_03656 PF01515 Phosphate acetyl/butaryl transferase J151_03656 PF00390 Malic enzyme, N-terminal domain J151_03657 PF00375 Sodium:dicarboxylate symporter family J151_03659 PF02743 Cache domain J151_03659 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_03659 PF00512 His Kinase A (phospho-acceptor) domain J151_03660 PF07690 Major Facilitator Superfamily J151_03662 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J151_03662 PF03466 LysR substrate binding domain J151_03663 PF00248 Aldo/keto reductase family J151_03667 PF00196 Bacterial regulatory proteins, luxR family J151_03667 PF00072 Response regulator receiver domain J151_03669 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_03669 PF08521 Two-component sensor kinase N-terminal J151_03669 PF00512 His Kinase A (phospho-acceptor) domain J151_03670 PF00486 Transcriptional regulatory protein, C terminal J151_03670 PF00072 Response regulator receiver domain J151_03672 PF03600 Citrate transporter J151_03674 PF00106 short chain dehydrogenase J151_03675 PF00356 Bacterial regulatory proteins, lacI family J151_03678 PF00128 Alpha amylase, catalytic domain J151_03681 PF03193 RsgA GTPase J151_03685 PF07715 TonB-dependent Receptor Plug Domain J151_03685 PF00593 TonB dependent receptor J151_03686 PF01522 Polysaccharide deacetylase J151_03687 PF00462 Glutaredoxin J151_03690 PF01527 Transposase J151_03695 PF02645 Uncharacterised protein, DegV family COG1307 J151_03696 PF01327 Polypeptide deformylase J151_03697 PF03960 ArsC family J151_03700 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) J151_03701 PF01270 Glycosyl hydrolases family 8 J151_03702 PF03170 Bacterial cellulose synthase subunit J151_03703 PF03552 Cellulose synthase J151_03703 PF07238 PilZ domain J151_03703 PF00535 Glycosyl transferase family 2 J151_03707 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family J151_03707 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain J151_03715 PF07715 TonB-dependent Receptor Plug Domain J151_03715 PF00593 TonB dependent receptor J151_03717 PF00392 Bacterial regulatory proteins, gntR family J151_03717 PF07702 UTRA domain J151_03719 PF00263 Bacterial type II and III secretion system protein J151_03719 PF03958 Bacterial type II/III secretion system short domain J151_03721 PF10741 Type II secretion system (T2SS), protein M subtype b J151_03722 PF05137 Fimbrial assembly protein (PilN) J151_03723 PF03934 Type II secretion system (T2SS), protein K J151_03725 PF07963 Prokaryotic N-terminal methylation motif J151_03726 PF12019 Type II transport protein GspH J151_03727 PF08334 Type II secretion system (T2SS), protein G J151_03728 PF00482 Type II secretion system (T2SS), protein F J151_03729 PF00437 Type II/IV secretion system protein J151_03729 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J151_03730 PF00082 Subtilase family J151_03730 PF04151 Bacterial pre-peptidase C-terminal domain J151_03731 PF13018 Extended Signal Peptide of Type V secretion system J151_03731 PF03895 YadA-like membrane anchor domain J151_03731 PF05662 Coiled stalk of trimeric autotransporter adhesin J151_03731 PF05658 Head domain of trimeric autotransporter adhesin J151_03732 PF00082 Subtilase family J151_03732 PF04151 Bacterial pre-peptidase C-terminal domain J151_03733 PF05658 Head domain of trimeric autotransporter adhesin J151_03733 PF05662 Coiled stalk of trimeric autotransporter adhesin J151_03733 PF13018 Extended Signal Peptide of Type V secretion system J151_03733 PF03895 YadA-like membrane anchor domain J151_03734 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain J151_03734 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal J151_03734 PF02769 AIR synthase related protein, C-terminal domain J151_03735 PF10411 Disulfide bond isomerase protein N-terminus J151_03735 PF13098 Thioredoxin-like domain J151_03736 PF02899 Phage integrase, N-terminal SAM-like domain J151_03736 PF00589 Phage integrase family J151_03739 PF03739 Lipopolysaccharide export system permease LptF/LptG J151_03741 PF02789 Cytosol aminopeptidase family, N-terminal domain J151_03741 PF00883 Cytosol aminopeptidase family, catalytic domain J151_03744 PF00133 tRNA synthetases class I (I, L, M and V) J151_03744 PF08264 Anticodon-binding domain of tRNA J151_03744 PF10458 Valyl tRNA synthetase tRNA binding arm J151_03745 PF00593 TonB dependent receptor J151_03745 PF07715 TonB-dependent Receptor Plug Domain J151_03746 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain J151_03746 PF01464 Transglycosylase SLT domain J151_03747 PF00544 Pectate lyase J151_03750 PF01066 CDP-alcohol phosphatidyltransferase J151_03752 PF04073 Aminoacyl-tRNA editing domain J151_03752 PF03129 Anticodon binding domain J151_03752 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J151_03753 PF00816 H-NS histone family J151_03755 PF02405 Permease MlaE J151_03756 PF00005 ABC transporter J151_03757 PF03886 ABC-type transport auxiliary lipoprotein component J151_03757 PF02470 MlaD protein J151_03761 PF14307 Glycosyltransferase WbsX J151_03761 PF05045 Rhamnan synthesis protein F J151_03762 PF01144 Coenzyme A transferase J151_03763 PF01144 Coenzyme A transferase J151_03764 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J151_03764 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J151_03764 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J151_03764 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J151_03765 PF01050 Mannose-6-phosphate isomerase J151_03765 PF00483 Nucleotidyl transferase J151_03766 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J151_03766 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J151_03766 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J151_03767 PF04321 RmlD substrate binding domain J151_03768 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase J151_03769 PF00483 Nucleotidyl transferase J151_03770 PF16363 GDP-mannose 4,6 dehydratase J151_03771 PF01012 Electron transfer flavoprotein domain J151_03772 PF00766 Electron transfer flavoprotein FAD-binding domain J151_03772 PF01012 Electron transfer flavoprotein domain J151_03774 PF01040 UbiA prenyltransferase family J151_03775 PF04030 D-arabinono-1,4-lactone oxidase J151_03775 PF01565 FAD binding domain J151_03776 PF00106 short chain dehydrogenase J151_03778 PF01370 NAD dependent epimerase/dehydratase family J151_03779 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J151_03779 PF07992 Pyridine nucleotide-disulphide oxidoreductase J151_03784 PF00535 Glycosyl transferase family 2 J151_03786 PF00005 ABC transporter J151_03786 PF14524 Wzt C-terminal domain J151_03788 PF01053 Cys/Met metabolism PLP-dependent enzyme J151_03789 PF00571 CBS domain J151_03789 PF00291 Pyridoxal-phosphate dependent enzyme J151_03793 PF00437 Type II/IV secretion system protein J151_03794 PF14497 Glutathione S-transferase, C-terminal domain J151_03794 PF02798 Glutathione S-transferase, N-terminal domain J151_03796 PF00271 Helicase conserved C-terminal domain J151_03796 PF00270 DEAD/DEAH box helicase J151_03799 PF00593 TonB dependent receptor J151_03799 PF07715 TonB-dependent Receptor Plug Domain J151_03800 PF01242 6-pyruvoyl tetrahydropterin synthase J151_03803 PF13185 GAF domain J151_03805 PF00756 Putative esterase J151_03806 PF07715 TonB-dependent Receptor Plug Domain J151_03806 PF00593 TonB dependent receptor J151_03807 PF13419 Haloacid dehalogenase-like hydrolase J151_03808 PF00817 impB/mucB/samB family J151_03808 PF11799 impB/mucB/samB family C-terminal domain J151_03809 PF07977 FabA-like domain J151_03810 PF00109 Beta-ketoacyl synthase, N-terminal domain J151_03810 PF02801 Beta-ketoacyl synthase, C-terminal domain J151_03812 PF01432 Peptidase family M3 J151_03815 PF07732 Multicopper oxidase J151_03815 PF07731 Multicopper oxidase J151_03815 PF00394 Multicopper oxidase J151_03816 PF05275 Copper resistance protein B precursor (CopB) J151_03817 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J151_03823 PF01380 SIS domain J151_03824 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J151_03825 PF02687 FtsX-like permease family J151_03825 PF00005 ABC transporter J151_03825 PF12704 MacB-like periplasmic core domain J151_03826 PF12704 MacB-like periplasmic core domain J151_03826 PF02687 FtsX-like permease family J151_03826 PF00005 ABC transporter J151_03827 PF12704 MacB-like periplasmic core domain J151_03827 PF02687 FtsX-like permease family J151_03829 PF00158 Sigma-54 interaction domain J151_03829 PF00072 Response regulator receiver domain J151_03830 PF12804 MobA-like NTP transferase domain J151_03830 PF00132 Bacterial transferase hexapeptide (six repeats) J151_03830 PF14602 Hexapeptide repeat of succinyl-transferase J151_03833 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain J151_03833 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain J151_03834 PF02874 ATP synthase alpha/beta family, beta-barrel domain J151_03834 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J151_03835 PF00231 ATP synthase J151_03836 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J151_03836 PF02874 ATP synthase alpha/beta family, beta-barrel domain J151_03836 PF00306 ATP synthase alpha/beta chain, C terminal domain J151_03837 PF00213 ATP synthase delta (OSCP) subunit J151_03838 PF00430 ATP synthase B/B' CF(0) J151_03839 PF00137 ATP synthase subunit C J151_03840 PF00119 ATP synthase A chain J151_03844 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J151_03844 PF07992 Pyridine nucleotide-disulphide oxidoreductase J151_03846 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J151_03846 PF00364 Biotin-requiring enzyme J151_03846 PF02817 e3 binding domain J151_03852 PF03180 NLPA lipoprotein J151_03853 PF00528 Binding-protein-dependent transport system inner membrane component J151_03854 PF09383 NIL domain J151_03854 PF00005 ABC transporter J151_03855 PF00892 EamA-like transporter family J151_03856 PF04461 Protein of unknown function (DUF520) J151_03858 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_03858 PF00512 His Kinase A (phospho-acceptor) domain J151_03858 PF01627 Hpt domain J151_03858 PF00989 PAS fold J151_03858 PF00072 Response regulator receiver domain J151_03858 PF18415 Histidine kinase receptor ArcB trans-membrane domain J151_03862 PF13419 Haloacid dehalogenase-like hydrolase J151_03863 PF01479 S4 domain J151_03863 PF00849 RNA pseudouridylate synthase J151_03864 PF05175 Methyltransferase small domain J151_03864 PF08468 Methyltransferase small domain N-terminal J151_03866 PF07995 Glucose / Sorbosone dehydrogenase J151_03868 PF00512 His Kinase A (phospho-acceptor) domain J151_03868 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_03868 PF00989 PAS fold J151_03872 PF00842 Alanine racemase, C-terminal domain J151_03872 PF01168 Alanine racemase, N-terminal domain J151_03873 PF01266 FAD dependent oxidoreductase J151_03874 PF01037 Lrp/AsnC ligand binding domain J151_03876 PF01641 SelR domain J151_03878 PF01618 MotA/TolQ/ExbB proton channel family J151_03879 PF13677 Membrane MotB of proton-channel complex MotA/MotB J151_03879 PF00691 OmpA family J151_03884 PF01061 ABC-2 type transporter J151_03885 PF00005 ABC transporter J151_03886 PF00999 Sodium/hydrogen exchanger family J151_03887 PF02469 Fasciclin domain J151_03888 PF03167 Uracil DNA glycosylase superfamily J151_03890 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J151_03892 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J151_03892 PF03466 LysR substrate binding domain J151_03893 PF03358 NADPH-dependent FMN reductase J151_03894 PF00248 Aldo/keto reductase family J151_03896 PF01431 Peptidase family M13 J151_03896 PF05649 Peptidase family M13 J151_03900 PF13520 Amino acid permease J151_03902 PF00072 Response regulator receiver domain J151_03902 PF04397 LytTr DNA-binding domain J151_03903 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_03903 PF06580 Histidine kinase J151_03903 PF02743 Cache domain J151_03903 PF00672 HAMP domain J151_03906 PF05974 Domain of unknown function (DUF892) J151_03907 PF05067 Manganese containing catalase J151_03910 PF08448 PAS fold J151_03910 PF01739 CheR methyltransferase, SAM binding domain J151_03910 PF01339 CheB methylesterase J151_03910 PF03705 CheR methyltransferase, all-alpha domain J151_03913 PF00158 Sigma-54 interaction domain J151_03913 PF02954 Bacterial regulatory protein, Fis family J151_03913 PF00072 Response regulator receiver domain J151_03915 PF01654 Cytochrome bd terminal oxidase subunit I J151_03916 PF02322 Cytochrome bd terminal oxidase subunit II J151_03920 PF16363 GDP-mannose 4,6 dehydratase J151_03922 PF03275 UDP-galactopyranose mutase J151_03924 PF00664 ABC transporter transmembrane region J151_03924 PF00005 ABC transporter J151_03927 PF08240 Alcohol dehydrogenase GroES-like domain J151_03927 PF13823 Alcohol dehydrogenase GroES-associated J151_03927 PF00107 Zinc-binding dehydrogenase J151_03936 PF07715 TonB-dependent Receptor Plug Domain J151_03936 PF00593 TonB dependent receptor J151_03939 PF00005 ABC transporter J151_03941 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J151_03941 PF03466 LysR substrate binding domain J151_03942 PF01042 Endoribonuclease L-PSP J151_03944 PF01527 Transposase J151_03948 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J151_03948 PF02203 Tar ligand binding domain homologue J151_03948 PF00672 HAMP domain J151_03951 PF03466 LysR substrate binding domain J151_03951 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J151_03952 PF02525 Flavodoxin-like fold J151_03961 PF00557 Metallopeptidase family M24 J151_03966 PF04545 Sigma-70, region 4 J151_03966 PF00140 Sigma-70 factor, region 1.2 J151_03966 PF04542 Sigma-70 region 2 J151_03966 PF03979 Sigma-70 factor, region 1.1 J151_03966 PF04546 Sigma-70, non-essential region J151_03966 PF04539 Sigma-70 region 3 J151_03967 PF02580 D-Tyr-tRNA(Tyr) deacylase J151_03968 PF03279 Bacterial lipid A biosynthesis acyltransferase J151_03970 PF00925 GTP cyclohydrolase II J151_03974 PF00535 Glycosyl transferase family 2 J151_03977 PF01189 16S rRNA methyltransferase RsmB/F J151_03977 PF01029 NusB family J151_03978 PF02911 Formyl transferase, C-terminal domain J151_03978 PF00551 Formyl transferase J151_03979 PF01327 Polypeptide deformylase J151_03980 PF01476 LysM domain J151_03981 PF02481 DNA recombination-mediator protein A J151_03981 PF17782 DprA winged helix domain J151_03982 PF04361 Protein of unknown function (DUF494) J151_03983 PF00114 Pilin (bacterial filament) J151_03983 PF07963 Prokaryotic N-terminal methylation motif J151_03985 PF01751 Toprim domain J151_03985 PF01131 DNA topoisomerase J151_03985 PF13368 Topoisomerase C-terminal repeat J151_03986 PF01300 Telomere recombination J151_03991 PF01343 Peptidase family S49 J151_03992 PF01554 MatE J151_03996 PF17764 3′ DNA-binding domain (3′BD) J151_03996 PF00270 DEAD/DEAH box helicase J151_03996 PF18074 Primosomal protein N C-terminal domain J151_03996 PF18319 PriA DNA helicase Cys-rich region (CRR) domain J151_03996 PF00271 Helicase conserved C-terminal domain J151_03997 PF13417 Glutathione S-transferase, N-terminal domain J151_03997 PF00043 Glutathione S-transferase, C-terminal domain J151_04000 PF07992 Pyridine nucleotide-disulphide oxidoreductase J151_04001 PF03458 UPF0126 domain J151_04002 PF04545 Sigma-70, region 4 J151_04002 PF04542 Sigma-70 region 2 J151_04003 PF03167 Uracil DNA glycosylase superfamily J151_04004 PF00072 Response regulator receiver domain J151_04004 PF01339 CheB methylesterase J151_04005 PF18075 FtsX extracellular domain J151_04006 PF00005 ABC transporter J151_04007 PF12300 ATP-dependent RNA helicase RhlB J151_04007 PF00270 DEAD/DEAH box helicase J151_04007 PF00271 Helicase conserved C-terminal domain J151_04008 PF00085 Thioredoxin J151_04009 PF07498 Rho termination factor, N-terminal domain J151_04009 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J151_04009 PF07497 Rho termination factor, RNA-binding domain J151_04010 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) J151_04011 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J151_04011 PF03466 LysR substrate binding domain J151_04013 PF03971 Monomeric isocitrate dehydrogenase J151_04016 PF09704 CRISPR-associated protein (Cas_Cas5) J151_04021 PF01867 CRISPR associated protein Cas1 J151_04022 PF09827 CRISPR associated protein Cas2 J151_04024 PF04972 BON domain J151_04024 PF01476 LysM domain J151_04025 PF14489 QueF-like protein J151_04025 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term J151_04026 PF01546 Peptidase family M20/M25/M40 J151_04026 PF07687 Peptidase dimerisation domain J151_04027 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J151_04028 PF00873 AcrB/AcrD/AcrF family J151_04029 PF00873 AcrB/AcrD/AcrF family J151_04030 PF07063 Domain of unknown function (DUF1338) J151_04038 PF01427 D-ala-D-ala dipeptidase J151_04039 PF01510 N-acetylmuramoyl-L-alanine amidase J151_04041 PF13378 Enolase C-terminal domain-like J151_04041 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J151_04043 PF13520 Amino acid permease J151_04046 PF05360 yiaA/B two helix domain J151_04047 PF07995 Glucose / Sorbosone dehydrogenase J151_04048 PF14310 Fibronectin type III-like domain J151_04048 PF00933 Glycosyl hydrolase family 3 N terminal domain J151_04048 PF01915 Glycosyl hydrolase family 3 C-terminal domain J151_04049 PF02152 Dihydroneopterin aldolase J151_04050 PF00814 Glycoprotease family J151_04051 PF01165 Ribosomal protein S21 J151_04052 PF09424 Yqey-like protein J151_04053 PF03631 Virulence factor BrkB J151_04054 PF01807 CHC2 zinc finger J151_04054 PF08275 DNA primase catalytic core, N-terminal domain J151_04054 PF08278 DNA primase DnaG DnaB-binding J151_04054 PF10410 DnaB-helicase binding domain of primase J151_04055 PF13593 SBF-like CPA transporter family (DUF4137) J151_04057 PF01040 UbiA prenyltransferase family J151_04062 PF00510 Cytochrome c oxidase subunit III J151_04063 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 J151_04065 PF00115 Cytochrome C and Quinol oxidase polypeptide I J151_04066 PF02790 Cytochrome C oxidase subunit II, transmembrane domain J151_04066 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J151_04068 PF18327 Proline utilization A proline dehydrogenase N-terminal domain J151_04068 PF14850 DNA-binding domain of Proline dehydrogenase J151_04068 PF01619 Proline dehydrogenase J151_04068 PF00171 Aldehyde dehydrogenase family J151_04076 PF00579 tRNA synthetases class I (W and Y) J151_04077 PF01551 Peptidase family M23 J151_04077 PF04225 Opacity-associated protein A LysM-like domain J151_04078 PF03702 Anhydro-N-acetylmuramic acid kinase J151_04080 PF07690 Major Facilitator Superfamily J151_04081 PF03372 Endonuclease/Exonuclease/phosphatase family J151_04082 PF00156 Phosphoribosyl transferase domain J151_04084 PF13614 AAA domain J151_04085 PF02195 ParB-like nuclease domain J151_04085 PF17762 HTH domain found in ParB protein J151_04087 PF01370 NAD dependent epimerase/dehydratase family J151_04088 PF00535 Glycosyl transferase family 2 J151_04091 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J151_04091 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J151_04091 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J151_04091 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J151_04092 PF00692 dUTPase J151_04093 PF04127 DNA / pantothenate metabolism flavoprotein J151_04093 PF02441 Flavoprotein J151_04094 PF04002 RadC-like JAB domain J151_04095 PF00750 tRNA synthetases class I (R) J151_04095 PF03485 Arginyl tRNA synthetase N terminal domain J151_04095 PF05746 DALR anticodon binding domain J151_04098 PF00106 short chain dehydrogenase J151_04099 PF01757 Acyltransferase family J151_04100 PF03033 Glycosyltransferase family 28 N-terminal domain J151_04101 PF00668 Condensation domain J151_04101 PF13193 AMP-binding enzyme C-terminal domain J151_04101 PF00975 Thioesterase domain J151_04101 PF00501 AMP-binding enzyme J151_04101 PF00550 Phosphopantetheine attachment site J151_04102 PF17810 Arginine decarboxylase helical bundle domain J151_04102 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J151_04102 PF17944 Arginine decarboxylase C-terminal helical extension J151_04103 PF17284 Spermidine synthase tetramerisation domain J151_04108 PF00543 Nitrogen regulatory protein P-II J151_04109 PF04380 Membrane fusogenic activity J151_04110 PF01078 Magnesium chelatase, subunit ChlI J151_04110 PF13335 Magnesium chelatase, subunit ChlI C-terminal J151_04116 PF13683 Integrase core domain J151_04116 PF13276 HTH-like domain J151_04120 PF13361 UvrD-like helicase C-terminal domain J151_04120 PF00580 UvrD/REP helicase N-terminal domain J151_04120 PF00570 HRDC domain J151_04123 PF01527 Transposase J151_04124 PF02463 RecF/RecN/SMC N terminal domain J151_04133 PF01078 Magnesium chelatase, subunit ChlI J151_04133 PF13335 Magnesium chelatase, subunit ChlI C-terminal J151_04136 PF12792 CSS motif domain associated with EAL J151_04136 PF00563 EAL domain J151_04137 PF00487 Fatty acid desaturase J151_04138 PF00175 Oxidoreductase NAD-binding domain J151_04138 PF00111 2Fe-2S iron-sulfur cluster binding domain J151_04138 PF00970 Oxidoreductase FAD-binding domain J151_04139 PF00440 Bacterial regulatory proteins, tetR family J151_04145 PF01139 tRNA-splicing ligase RtcB J151_04153 PF08338 Domain of unknown function (DUF1731) J151_04153 PF01370 NAD dependent epimerase/dehydratase family J151_04154 PF00486 Transcriptional regulatory protein, C terminal J151_04154 PF00072 Response regulator receiver domain J151_04155 PF00512 His Kinase A (phospho-acceptor) domain J151_04155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_04155 PF08521 Two-component sensor kinase N-terminal J151_04159 PF00595 PDZ domain J151_04163 PF01594 AI-2E family transporter J151_04164 PF13419 Haloacid dehalogenase-like hydrolase J151_04165 PF00883 Cytosol aminopeptidase family, catalytic domain J151_04165 PF02789 Cytosol aminopeptidase family, N-terminal domain J151_04167 PF04542 Sigma-70 region 2 J151_04167 PF08281 Sigma-70, region 4 J151_04168 PF00199 Catalase J151_04171 PF00072 Response regulator receiver domain J151_04171 PF00196 Bacterial regulatory proteins, luxR family J151_04172 PF07730 Histidine kinase J151_04173 PF13533 Biotin-lipoyl like J151_04174 PF00005 ABC transporter J151_04178 PF00892 EamA-like transporter family J151_04179 PF00892 EamA-like transporter family J151_04180 PF00892 EamA-like transporter family J151_04183 PF00753 Metallo-beta-lactamase superfamily J151_04184 PF00579 tRNA synthetases class I (W and Y) J151_04185 PF05532 CsbD-like J151_04188 PF00491 Arginase family J151_04193 PF02223 Thymidylate kinase J151_04196 PF03309 Type III pantothenate kinase J151_04197 PF03099 Biotin/lipoate A/B protein ligase family J151_04197 PF08279 HTH domain J151_04197 PF02237 Biotin protein ligase C terminal domain J151_04199 PF06167 Glucose-regulated metallo-peptidase M90 J151_04202 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_04202 PF00512 His Kinase A (phospho-acceptor) domain J151_04202 PF00672 HAMP domain J151_04203 PF00072 Response regulator receiver domain J151_04203 PF00486 Transcriptional regulatory protein, C terminal J151_04205 PF01207 Dihydrouridine synthase (Dus) J151_04208 PF00199 Catalase J151_04208 PF06628 Catalase-related immune-responsive J151_04209 PF13307 Helicase C-terminal domain J151_04209 PF06733 DEAD_2 J151_04212 PF08501 Shikimate dehydrogenase substrate binding domain J151_04212 PF01488 Shikimate / quinate 5-dehydrogenase J151_04212 PF18317 Shikimate 5'-dehydrogenase C-terminal domain J151_04214 PF00258 Flavodoxin J151_04214 PF00667 FAD binding domain J151_04214 PF00175 Oxidoreductase NAD-binding domain J151_04216 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J151_04216 PF03466 LysR substrate binding domain J151_04218 PF00490 Delta-aminolevulinic acid dehydratase J151_04222 PF00326 Prolyl oligopeptidase family J151_04222 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J151_04223 PF02798 Glutathione S-transferase, N-terminal domain J151_04223 PF00043 Glutathione S-transferase, C-terminal domain J151_04227 PF04820 Tryptophan halogenase J151_04230 PF00005 ABC transporter J151_04232 PF01381 Helix-turn-helix J151_04234 PF01229 Glycosyl hydrolases family 39 J151_04235 PF02583 Metal-sensitive transcriptional repressor J151_04236 PF01545 Cation efflux family J151_04236 PF16916 Dimerisation domain of Zinc Transporter J151_04238 PF00593 TonB dependent receptor J151_04238 PF07715 TonB-dependent Receptor Plug Domain J151_04240 PF12833 Helix-turn-helix domain J151_04240 PF01965 DJ-1/PfpI family J151_04241 PF00111 2Fe-2S iron-sulfur cluster binding domain J151_04241 PF00175 Oxidoreductase NAD-binding domain J151_04241 PF00970 Oxidoreductase FAD-binding domain J151_04242 PF00005 ABC transporter J151_04243 PF01061 ABC-2 type transporter J151_04246 PF08546 Ketopantoate reductase PanE/ApbA C terminal J151_04246 PF02558 Ketopantoate reductase PanE/ApbA J151_04252 PF00268 Ribonucleotide reductase, small chain J151_04253 PF00317 Ribonucleotide reductase, all-alpha domain J151_04253 PF02867 Ribonucleotide reductase, barrel domain J151_04253 PF03477 ATP cone domain J151_04255 PF13607 Succinyl-CoA ligase like flavodoxin domain J151_04255 PF13380 CoA binding domain J151_04255 PF00583 Acetyltransferase (GNAT) family J151_04256 PF00571 CBS domain J151_04256 PF03448 MgtE intracellular N domain J151_04256 PF01769 Divalent cation transporter J151_04257 PF00194 Eukaryotic-type carbonic anhydrase J151_04258 PF00999 Sodium/hydrogen exchanger family J151_04258 PF02254 TrkA-N domain J151_04259 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J151_04259 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J151_04260 PF00723 Glycosyl hydrolases family 15 J151_04263 PF05166 YcgL domain J151_04264 PF02801 Beta-ketoacyl synthase, C-terminal domain J151_04264 PF00109 Beta-ketoacyl synthase, N-terminal domain J151_04266 PF00535 Glycosyl transferase family 2 J151_04277 PF07977 FabA-like domain J151_04278 PF01553 Acyltransferase J151_04280 PF00550 Phosphopantetheine attachment site J151_04281 PF04820 Tryptophan halogenase J151_04285 PF07676 WD40-like Beta Propeller Repeat J151_04285 PF00326 Prolyl oligopeptidase family J151_04288 PF01218 Coproporphyrinogen III oxidase J151_04289 PF00476 DNA polymerase family A J151_04289 PF01612 3'-5' exonuclease J151_04289 PF01367 5'-3' exonuclease, C-terminal SAM fold J151_04289 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J151_04295 PF03793 PASTA domain J151_04295 PF00069 Protein kinase domain J151_04303 PF04717 Type VI secretion system, phage-baseplate injector J151_04306 PF00069 Protein kinase domain J151_04306 PF03793 PASTA domain J151_04308 PF04542 Sigma-70 region 2 J151_04308 PF08281 Sigma-70, region 4 J151_04311 PF00328 Histidine phosphatase superfamily (branch 2) J151_04318 PF07724 AAA domain (Cdc48 subfamily) J151_04318 PF00004 ATPase family associated with various cellular activities (AAA) J151_04318 PF10431 C-terminal, D2-small domain, of ClpB protein J151_04318 PF17871 AAA lid domain J151_04323 PF05638 Type VI secretion system effector, Hcp J151_04328 PF12464 Maltose acetyltransferase J151_04328 PF14602 Hexapeptide repeat of succinyl-transferase J151_04329 PF00580 UvrD/REP helicase N-terminal domain J151_04329 PF13361 UvrD-like helicase C-terminal domain J151_04331 PF13396 Phospholipase_D-nuclease N-terminal J151_04331 PF13091 PLD-like domain J151_04332 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J151_04332 PF03466 LysR substrate binding domain J151_04333 PF03737 Aldolase/RraA J151_04334 PF04303 PrpF protein J151_04335 PF04909 Amidohydrolase J151_04336 PF00471 Ribosomal protein L33 J151_04337 PF00830 Ribosomal L28 family J151_04338 PF00873 AcrB/AcrD/AcrF family J151_04339 PF13533 Biotin-lipoyl like J151_04343 PF02527 rRNA small subunit methyltransferase G J151_04344 PF09423 PhoD-like phosphatase J151_04344 PF16655 PhoD-like phosphatase, N-terminal domain J151_04346 PF09423 PhoD-like phosphatase J151_04346 PF16655 PhoD-like phosphatase, N-terminal domain J151_04347 PF01648 4'-phosphopantetheinyl transferase superfamily J151_04348 PF04226 Transglycosylase associated protein J151_04350 PF03372 Endonuclease/Exonuclease/phosphatase family J151_04352 PF00480 ROK family J151_04354 PF09312 SurA N-terminal domain J151_04356 PF00474 Sodium:solute symporter family J151_04357 PF04341 Protein of unknown function, DUF485 J151_04359 PF00501 AMP-binding enzyme J151_04359 PF16177 Acetyl-coenzyme A synthetase N-terminus J151_04359 PF13193 AMP-binding enzyme C-terminal domain J151_04360 PF00072 Response regulator receiver domain J151_04360 PF00196 Bacterial regulatory proteins, luxR family J151_04365 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J151_04365 PF04616 Glycosyl hydrolases family 43 J151_04366 PF00248 Aldo/keto reductase family J151_04369 PF01557 Fumarylacetoacetate (FAA) hydrolase family J151_04370 PF13378 Enolase C-terminal domain-like J151_04370 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J151_04372 PF05336 L-rhamnose mutarotase J151_04373 PF07690 Major Facilitator Superfamily J151_04374 PF01614 Bacterial transcriptional regulator J151_04374 PF09339 IclR helix-turn-helix domain J151_04375 PF02659 Putative manganese efflux pump J151_04376 PF00512 His Kinase A (phospho-acceptor) domain J151_04376 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_04378 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain J151_04378 PF06165 Glycosyltransferase family 36 J151_04381 PF13570 PQQ-like domain J151_04381 PF13360 PQQ-like domain J151_04381 PF01011 PQQ enzyme repeat J151_04385 PF04357 TamB, inner membrane protein subunit of TAM complex J151_04386 PF01103 Surface antigen J151_04386 PF17243 POTRA domain TamA domain 1 J151_04389 PF01527 Transposase J151_04391 PF03412 Peptidase C39 family J151_04391 PF00664 ABC transporter transmembrane region J151_04391 PF00005 ABC transporter J151_04393 PF02092 Glycyl-tRNA synthetase beta subunit J151_04393 PF05746 DALR anticodon binding domain J151_04394 PF02091 Glycyl-tRNA synthetase alpha subunit J151_04395 PF00437 Type II/IV secretion system protein J151_04395 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J151_04397 PF00117 Glutamine amidotransferase class-I J151_04397 PF00958 GMP synthase C terminal domain J151_04399 PF00902 Sec-independent protein translocase protein (TatC) J151_04400 PF02416 mttA/Hcf106 family J151_04401 PF02416 mttA/Hcf106 family J151_04403 PF00762 Ferrochelatase J151_04404 PF12697 Alpha/beta hydrolase family J151_04406 PF04381 Putative exonuclease, RdgC J151_04407 PF01171 PP-loop family J151_04409 PF00356 Bacterial regulatory proteins, lacI family J151_04410 PF07488 Glycosyl hydrolase family 67 middle domain J151_04410 PF03648 Glycosyl hydrolase family 67 N-terminus J151_04410 PF07477 Glycosyl hydrolase family 67 C-terminus J151_04412 PF13378 Enolase C-terminal domain-like J151_04412 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J151_04413 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J151_04413 PF04616 Glycosyl hydrolases family 43 J151_04414 PF14310 Fibronectin type III-like domain J151_04414 PF00933 Glycosyl hydrolase family 3 N terminal domain J151_04414 PF01915 Glycosyl hydrolase family 3 C-terminal domain J151_04414 PF07691 PA14 domain J151_04415 PF08125 Mannitol dehydrogenase C-terminal domain J151_04415 PF01232 Mannitol dehydrogenase Rossmann domain J151_04420 PF00171 Aldehyde dehydrogenase family J151_04423 PF00202 Aminotransferase class-III J151_04424 PF00202 Aminotransferase class-III J151_04426 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J151_04426 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J151_04429 PF08450 SMP-30/Gluconolactonase/LRE-like region J151_04430 PF00331 Glycosyl hydrolase family 10 J151_04431 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J151_04431 PF00703 Glycosyl hydrolases family 2 J151_04431 PF02837 Glycosyl hydrolases family 2, sugar binding domain J151_04431 PF16355 Domain of unknown function (DUF4982) J151_04431 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 J151_04432 PF02614 Glucuronate isomerase J151_04433 PF00331 Glycosyl hydrolase family 10 J151_04433 PF03422 Carbohydrate binding module (family 6) J151_04433 PF00553 Cellulose binding domain J151_04435 PF00331 Glycosyl hydrolase family 10 J151_04435 PF03422 Carbohydrate binding module (family 6) J151_04435 PF00553 Cellulose binding domain J151_04439 PF04616 Glycosyl hydrolases family 43 J151_04449 PF02801 Beta-ketoacyl synthase, C-terminal domain J151_04449 PF08659 KR domain J151_04449 PF08240 Alcohol dehydrogenase GroES-like domain J151_04449 PF00109 Beta-ketoacyl synthase, N-terminal domain J151_04449 PF16197 Ketoacyl-synthetase C-terminal extension J151_04449 PF00107 Zinc-binding dehydrogenase J151_04449 PF00698 Acyl transferase domain J151_04449 PF14765 Polyketide synthase dehydratase J151_04449 PF00550 Phosphopantetheine attachment site J151_04450 PF01553 Acyltransferase J151_04452 PF00356 Bacterial regulatory proteins, lacI family J151_04455 PF04820 Tryptophan halogenase J151_04456 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family J151_04457 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) J151_04459 PF04337 Protein of unknown function, DUF480 J151_04462 PF13361 UvrD-like helicase C-terminal domain J151_04462 PF00580 UvrD/REP helicase N-terminal domain J151_04463 PF00265 Thymidine kinase J151_04464 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J151_04464 PF01590 GAF domain J151_04464 PF08446 PAS fold J151_04464 PF00360 Phytochrome region J151_04464 PF00512 His Kinase A (phospho-acceptor) domain J151_04465 PF04349 Periplasmic glucan biosynthesis protein, MdoG J151_04467 PF06827 Zinc finger found in FPG and IleRS J151_04467 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J151_04467 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J151_04474 PF03594 Benzoate membrane transport protein J151_04475 PF13426 PAS domain J151_04475 PF08446 PAS fold J151_04475 PF01590 GAF domain J151_04475 PF00360 Phytochrome region J151_04476 PF01126 Heme oxygenase J151_04477 PF07690 Major Facilitator Superfamily J151_04478 PF01263 Aldose 1-epimerase J151_04480 PF02810 SEC-C motif J151_04481 PF01925 Sulfite exporter TauE/SafE J151_04485 PF01227 GTP cyclohydrolase I J151_04487 PF07869 Protein of unknown function (DUF1656) J151_04488 PF00529 HlyD membrane-fusion protein of T1SS J151_04488 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J151_04489 PF02321 Outer membrane efflux protein J151_04490 PF04632 Fusaric acid resistance protein family J151_04491 PF00083 Sugar (and other) transporter J151_04492 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family J151_04493 PF13091 PLD-like domain J151_04493 PF13396 Phospholipase_D-nuclease N-terminal J151_04498 PF01850 PIN domain J151_04503 PF00849 RNA pseudouridylate synthase J151_04505 PF01527 Transposase J151_04509 PF00289 Biotin carboxylase, N-terminal domain J151_04509 PF02785 Biotin carboxylase C-terminal domain J151_04509 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J151_04510 PF01425 Amidase J151_04517 PF13538 UvrD-like helicase C-terminal domain J151_04520 PF12705 PD-(D/E)XK nuclease superfamily J151_04520 PF13361 UvrD-like helicase C-terminal domain J151_04520 PF00580 UvrD/REP helicase N-terminal domain J151_04521 PF17946 RecC C-terminal domain J151_04523 PF00005 ABC transporter J151_04524 PF02405 Permease MlaE J151_04525 PF02470 MlaD protein J151_04526 PF05494 MlaC protein J151_04528 PF04333 MlaA lipoprotein J151_04530 PF00255 Glutathione peroxidase J151_04532 PF02646 RmuC family J151_04533 PF00107 Zinc-binding dehydrogenase J151_04533 PF08240 Alcohol dehydrogenase GroES-like domain J151_04534 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J151_04534 PF03466 LysR substrate binding domain J151_04536 PF13417 Glutathione S-transferase, N-terminal domain J151_04536 PF00043 Glutathione S-transferase, C-terminal domain J151_04538 PF13520 Amino acid permease J151_04539 PF07971 Glycosyl hydrolase family 92 J151_04539 PF17678 Glycosyl hydrolase family 92 N-terminal domain J151_04540 PF10947 Protein of unknown function (DUF2628) J151_04541 PF00990 Diguanylate cyclase, GGDEF domain J151_04542 PF05651 Putative sugar diacid recognition J151_04542 PF17853 GGDEF-like domain J151_04542 PF13556 PucR C-terminal helix-turn-helix domain J151_04543 PF02595 Glycerate kinase family J151_04544 PF07690 Major Facilitator Superfamily J151_04547 PF17785 PUA-like domain J151_04547 PF10672 S-adenosylmethionine-dependent methyltransferase J151_04549 PF03741 Integral membrane protein TerC family J151_04550 PF01694 Rhomboid family J151_04551 PF03009 Glycerophosphoryl diester phosphodiesterase family J151_04553 PF01569 PAP2 superfamily J151_04554 PF12631 MnmE helical domain J151_04554 PF01926 50S ribosome-binding GTPase J151_04554 PF10396 GTP-binding protein TrmE N-terminus J151_04555 PF01522 Polysaccharide deacetylase J151_04556 PF14849 YidC periplasmic domain J151_04556 PF02096 60Kd inner membrane protein J151_04557 PF00825 Ribonuclease P J151_04558 PF00468 Ribosomal protein L34