locus-tag class description XCAW_00001 PF11638 DnaA N-terminal domain XCAW_00001 PF00308 Bacterial dnaA protein XCAW_00001 PF08299 Bacterial dnaA protein helix-turn-helix XCAW_00002 PF02768 DNA polymerase III beta subunit, C-terminal domain XCAW_00002 PF02767 DNA polymerase III beta subunit, central domain XCAW_00002 PF00712 DNA polymerase III beta subunit, N-terminal domain XCAW_00005 PF02463 RecF/RecN/SMC N terminal domain XCAW_00006 PF00986 DNA gyrase B subunit, carboxyl terminus XCAW_00006 PF18053 DNA gyrase B subunit insert domain XCAW_00006 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_00006 PF01751 Toprim domain XCAW_00006 PF00204 DNA gyrase B XCAW_00008 PF01435 Peptidase family M48 XCAW_00010 PF03544 Gram-negative bacterial TonB protein C-terminal XCAW_00011 PF01618 MotA/TolQ/ExbB proton channel family XCAW_00012 PF02472 Biopolymer transport protein ExbD/TolR XCAW_00013 PF02472 Biopolymer transport protein ExbD/TolR XCAW_00014 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ XCAW_00016 PF13091 PLD-like domain XCAW_00016 PF13396 Phospholipase_D-nuclease N-terminal XCAW_00020 PF04055 Radical SAM superfamily XCAW_00022 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) XCAW_00025 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XCAW_00025 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XCAW_00026 PF13180 PDZ domain XCAW_00026 PF03572 Peptidase family S41 XCAW_00027 PF01551 Peptidase family M23 XCAW_00029 PF04389 Peptidase family M28 XCAW_00031 PF00150 Cellulase (glycosyl hydrolase family 5) XCAW_00032 PF00150 Cellulase (glycosyl hydrolase family 5) XCAW_00039 PF04616 Glycosyl hydrolases family 43 XCAW_00043 PF03422 Carbohydrate binding module (family 6) XCAW_00043 PF00331 Glycosyl hydrolase family 10 XCAW_00043 PF00553 Cellulose binding domain XCAW_00045 PF03422 Carbohydrate binding module (family 6) XCAW_00045 PF00553 Cellulose binding domain XCAW_00045 PF00331 Glycosyl hydrolase family 10 XCAW_00046 PF02614 Glucuronate isomerase XCAW_00047 PF00703 Glycosyl hydrolases family 2 XCAW_00047 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 XCAW_00047 PF02836 Glycosyl hydrolases family 2, TIM barrel domain XCAW_00047 PF16355 Domain of unknown function (DUF4982) XCAW_00047 PF02837 Glycosyl hydrolases family 2, sugar binding domain XCAW_00048 PF00331 Glycosyl hydrolase family 10 XCAW_00049 PF08450 SMP-30/Gluconolactonase/LRE-like region XCAW_00052 PF02782 FGGY family of carbohydrate kinases, C-terminal domain XCAW_00052 PF00370 FGGY family of carbohydrate kinases, N-terminal domain XCAW_00054 PF00202 Aminotransferase class-III XCAW_00057 PF00171 Aldehyde dehydrogenase family XCAW_00063 PF08125 Mannitol dehydrogenase C-terminal domain XCAW_00063 PF01232 Mannitol dehydrogenase Rossmann domain XCAW_00064 PF14310 Fibronectin type III-like domain XCAW_00064 PF00933 Glycosyl hydrolase family 3 N terminal domain XCAW_00064 PF01915 Glycosyl hydrolase family 3 C-terminal domain XCAW_00064 PF07691 PA14 domain XCAW_00065 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain XCAW_00065 PF04616 Glycosyl hydrolases family 43 XCAW_00066 PF13378 Enolase C-terminal domain-like XCAW_00066 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain XCAW_00068 PF03648 Glycosyl hydrolase family 67 N-terminus XCAW_00068 PF07477 Glycosyl hydrolase family 67 C-terminus XCAW_00068 PF07488 Glycosyl hydrolase family 67 middle domain XCAW_00069 PF00356 Bacterial regulatory proteins, lacI family XCAW_00071 PF01171 PP-loop family XCAW_00072 PF04381 Putative exonuclease, RdgC XCAW_00074 PF12697 Alpha/beta hydrolase family XCAW_00075 PF00762 Ferrochelatase XCAW_00077 PF02416 mttA/Hcf106 family XCAW_00078 PF02416 mttA/Hcf106 family XCAW_00079 PF00902 Sec-independent protein translocase protein (TatC) XCAW_00081 PF00958 GMP synthase C terminal domain XCAW_00081 PF00117 Glutamine amidotransferase class-I XCAW_00083 PF00437 Type II/IV secretion system protein XCAW_00083 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain XCAW_00084 PF02091 Glycyl-tRNA synthetase alpha subunit XCAW_00085 PF02092 Glycyl-tRNA synthetase beta subunit XCAW_00085 PF05746 DALR anticodon binding domain XCAW_00090 PF17243 POTRA domain TamA domain 1 XCAW_00090 PF01103 Surface antigen XCAW_00091 PF04357 TamB, inner membrane protein subunit of TAM complex XCAW_00095 PF13360 PQQ-like domain XCAW_00095 PF13570 PQQ-like domain XCAW_00095 PF01011 PQQ enzyme repeat XCAW_00099 PF06165 Glycosyltransferase family 36 XCAW_00099 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain XCAW_00102 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_00102 PF00512 His Kinase A (phospho-acceptor) domain XCAW_00103 PF02659 Putative manganese efflux pump XCAW_00104 PF01614 Bacterial transcriptional regulator XCAW_00104 PF09339 IclR helix-turn-helix domain XCAW_00105 PF07690 Major Facilitator Superfamily XCAW_00106 PF05336 L-rhamnose mutarotase XCAW_00107 PF13378 Enolase C-terminal domain-like XCAW_00107 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain XCAW_00108 PF01557 Fumarylacetoacetate (FAA) hydrolase family XCAW_00111 PF00248 Aldo/keto reductase family XCAW_00112 PF04616 Glycosyl hydrolases family 43 XCAW_00112 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain XCAW_00117 PF00072 Response regulator receiver domain XCAW_00117 PF00196 Bacterial regulatory proteins, luxR family XCAW_00118 PF13193 AMP-binding enzyme C-terminal domain XCAW_00118 PF16177 Acetyl-coenzyme A synthetase N-terminus XCAW_00118 PF00501 AMP-binding enzyme XCAW_00120 PF04341 Protein of unknown function, DUF485 XCAW_00121 PF00474 Sodium:solute symporter family XCAW_00123 PF09312 SurA N-terminal domain XCAW_00125 PF00480 ROK family XCAW_00126 PF03372 Endonuclease/Exonuclease/phosphatase family XCAW_00128 PF04226 Transglycosylase associated protein XCAW_00129 PF01648 4'-phosphopantetheinyl transferase superfamily XCAW_00130 PF16655 PhoD-like phosphatase, N-terminal domain XCAW_00130 PF09423 PhoD-like phosphatase XCAW_00131 PF09423 PhoD-like phosphatase XCAW_00131 PF16655 PhoD-like phosphatase, N-terminal domain XCAW_00132 PF02527 rRNA small subunit methyltransferase G XCAW_00136 PF13533 Biotin-lipoyl like XCAW_00138 PF00873 AcrB/AcrD/AcrF family XCAW_00139 PF00830 Ribosomal L28 family XCAW_00140 PF00471 Ribosomal protein L33 XCAW_00141 PF04909 Amidohydrolase XCAW_00142 PF04303 PrpF protein XCAW_00143 PF03737 Aldolase/RraA XCAW_00144 PF03466 LysR substrate binding domain XCAW_00144 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCAW_00145 PF13091 PLD-like domain XCAW_00145 PF13396 Phospholipase_D-nuclease N-terminal XCAW_00148 PF00580 UvrD/REP helicase N-terminal domain XCAW_00148 PF13361 UvrD-like helicase C-terminal domain XCAW_00149 PF14602 Hexapeptide repeat of succinyl-transferase XCAW_00149 PF12464 Maltose acetyltransferase XCAW_00154 PF05638 Type VI secretion system effector, Hcp XCAW_00159 PF17871 AAA lid domain XCAW_00159 PF00004 ATPase family associated with various cellular activities (AAA) XCAW_00159 PF07724 AAA domain (Cdc48 subfamily) XCAW_00159 PF10431 C-terminal, D2-small domain, of ClpB protein XCAW_00167 PF00328 Histidine phosphatase superfamily (branch 2) XCAW_00170 PF08281 Sigma-70, region 4 XCAW_00170 PF04542 Sigma-70 region 2 XCAW_00172 PF00069 Protein kinase domain XCAW_00172 PF03793 PASTA domain XCAW_00175 PF04717 Type VI secretion system, phage-baseplate injector XCAW_00183 PF03793 PASTA domain XCAW_00183 PF00069 Protein kinase domain XCAW_00189 PF01367 5'-3' exonuclease, C-terminal SAM fold XCAW_00189 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain XCAW_00189 PF00476 DNA polymerase family A XCAW_00189 PF01612 3'-5' exonuclease XCAW_00191 PF01218 Coproporphyrinogen III oxidase XCAW_00194 PF07676 WD40-like Beta Propeller Repeat XCAW_00194 PF00326 Prolyl oligopeptidase family XCAW_00198 PF04820 Tryptophan halogenase XCAW_00199 PF00550 Phosphopantetheine attachment site XCAW_00201 PF01553 Acyltransferase XCAW_00202 PF07977 FabA-like domain XCAW_00212 PF00535 Glycosyl transferase family 2 XCAW_00214 PF00109 Beta-ketoacyl synthase, N-terminal domain XCAW_00214 PF02801 Beta-ketoacyl synthase, C-terminal domain XCAW_00215 PF05166 YcgL domain XCAW_00218 PF00723 Glycosyl hydrolases family 15 XCAW_00219 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain XCAW_00219 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain XCAW_00220 PF02254 TrkA-N domain XCAW_00220 PF00999 Sodium/hydrogen exchanger family XCAW_00221 PF00194 Eukaryotic-type carbonic anhydrase XCAW_00223 PF03448 MgtE intracellular N domain XCAW_00223 PF00571 CBS domain XCAW_00223 PF01769 Divalent cation transporter XCAW_00224 PF13607 Succinyl-CoA ligase like flavodoxin domain XCAW_00224 PF13380 CoA binding domain XCAW_00224 PF00583 Acetyltransferase (GNAT) family XCAW_00227 PF02867 Ribonucleotide reductase, barrel domain XCAW_00227 PF00317 Ribonucleotide reductase, all-alpha domain XCAW_00227 PF03477 ATP cone domain XCAW_00228 PF00268 Ribonucleotide reductase, small chain XCAW_00234 PF08546 Ketopantoate reductase PanE/ApbA C terminal XCAW_00234 PF02558 Ketopantoate reductase PanE/ApbA XCAW_00235 PF01061 ABC-2 type transporter XCAW_00236 PF00005 ABC transporter XCAW_00237 PF00970 Oxidoreductase FAD-binding domain XCAW_00237 PF00175 Oxidoreductase NAD-binding domain XCAW_00237 PF00111 2Fe-2S iron-sulfur cluster binding domain XCAW_00238 PF12833 Helix-turn-helix domain XCAW_00238 PF01965 DJ-1/PfpI family XCAW_00240 PF00593 TonB dependent receptor XCAW_00240 PF07715 TonB-dependent Receptor Plug Domain XCAW_00242 PF16916 Dimerisation domain of Zinc Transporter XCAW_00242 PF01545 Cation efflux family XCAW_00243 PF02583 Metal-sensitive transcriptional repressor XCAW_00244 PF01229 Glycosyl hydrolases family 39 XCAW_00246 PF01381 Helix-turn-helix XCAW_00248 PF00005 ABC transporter XCAW_00251 PF04820 Tryptophan halogenase XCAW_00255 PF00043 Glutathione S-transferase, C-terminal domain XCAW_00255 PF02798 Glutathione S-transferase, N-terminal domain XCAW_00256 PF00326 Prolyl oligopeptidase family XCAW_00256 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region XCAW_00261 PF00490 Delta-aminolevulinic acid dehydratase XCAW_00263 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCAW_00263 PF03466 LysR substrate binding domain XCAW_00265 PF00258 Flavodoxin XCAW_00265 PF00175 Oxidoreductase NAD-binding domain XCAW_00265 PF00667 FAD binding domain XCAW_00267 PF18317 Shikimate 5'-dehydrogenase C-terminal domain XCAW_00267 PF08501 Shikimate dehydrogenase substrate binding domain XCAW_00267 PF01488 Shikimate / quinate 5-dehydrogenase XCAW_00270 PF06733 DEAD_2 XCAW_00270 PF13307 Helicase C-terminal domain XCAW_00271 PF00199 Catalase XCAW_00271 PF06628 Catalase-related immune-responsive XCAW_00275 PF01207 Dihydrouridine synthase (Dus) XCAW_00277 PF00072 Response regulator receiver domain XCAW_00277 PF00486 Transcriptional regulatory protein, C terminal XCAW_00278 PF00512 His Kinase A (phospho-acceptor) domain XCAW_00278 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_00278 PF00672 HAMP domain XCAW_00281 PF06167 Glucose-regulated metallo-peptidase M90 XCAW_00283 PF08279 HTH domain XCAW_00283 PF02237 Biotin protein ligase C terminal domain XCAW_00283 PF03099 Biotin/lipoate A/B protein ligase family XCAW_00284 PF03309 Type III pantothenate kinase XCAW_00287 PF02223 Thymidylate kinase XCAW_00292 PF00491 Arginase family XCAW_00296 PF05532 CsbD-like XCAW_00297 PF00579 tRNA synthetases class I (W and Y) XCAW_00298 PF00753 Metallo-beta-lactamase superfamily XCAW_00301 PF00892 EamA-like transporter family XCAW_00302 PF00892 EamA-like transporter family XCAW_00306 PF00005 ABC transporter XCAW_00307 PF13533 Biotin-lipoyl like XCAW_00308 PF07730 Histidine kinase XCAW_00309 PF00072 Response regulator receiver domain XCAW_00309 PF00196 Bacterial regulatory proteins, luxR family XCAW_00312 PF00199 Catalase XCAW_00313 PF04542 Sigma-70 region 2 XCAW_00313 PF08281 Sigma-70, region 4 XCAW_00315 PF02789 Cytosol aminopeptidase family, N-terminal domain XCAW_00315 PF00883 Cytosol aminopeptidase family, catalytic domain XCAW_00316 PF13419 Haloacid dehalogenase-like hydrolase XCAW_00317 PF01594 AI-2E family transporter XCAW_00321 PF00595 PDZ domain XCAW_00327 PF08521 Two-component sensor kinase N-terminal XCAW_00327 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_00327 PF00512 His Kinase A (phospho-acceptor) domain XCAW_00328 PF00072 Response regulator receiver domain XCAW_00328 PF00486 Transcriptional regulatory protein, C terminal XCAW_00329 PF08338 Domain of unknown function (DUF1731) XCAW_00329 PF01370 NAD dependent epimerase/dehydratase family XCAW_00337 PF01139 tRNA-splicing ligase RtcB XCAW_00340 PF00440 Bacterial regulatory proteins, tetR family XCAW_00341 PF00970 Oxidoreductase FAD-binding domain XCAW_00341 PF00175 Oxidoreductase NAD-binding domain XCAW_00341 PF00111 2Fe-2S iron-sulfur cluster binding domain XCAW_00342 PF00487 Fatty acid desaturase XCAW_00343 PF12792 CSS motif domain associated with EAL XCAW_00343 PF00563 EAL domain XCAW_00346 PF01078 Magnesium chelatase, subunit ChlI XCAW_00346 PF13335 Magnesium chelatase, subunit ChlI C-terminal XCAW_00347 PF04380 Membrane fusogenic activity XCAW_00348 PF00543 Nitrogen regulatory protein P-II XCAW_00354 PF17284 Spermidine synthase tetramerisation domain XCAW_00355 PF17944 Arginine decarboxylase C-terminal helical extension XCAW_00355 PF17810 Arginine decarboxylase helical bundle domain XCAW_00355 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain XCAW_00356 PF00550 Phosphopantetheine attachment site XCAW_00356 PF00501 AMP-binding enzyme XCAW_00356 PF13193 AMP-binding enzyme C-terminal domain XCAW_00356 PF00975 Thioesterase domain XCAW_00356 PF00668 Condensation domain XCAW_00358 PF03033 Glycosyltransferase family 28 N-terminal domain XCAW_00359 PF01757 Acyltransferase family XCAW_00360 PF00106 short chain dehydrogenase XCAW_00363 PF00750 tRNA synthetases class I (R) XCAW_00363 PF05746 DALR anticodon binding domain XCAW_00363 PF03485 Arginyl tRNA synthetase N terminal domain XCAW_00364 PF04002 RadC-like JAB domain XCAW_00365 PF02441 Flavoprotein XCAW_00365 PF04127 DNA / pantothenate metabolism flavoprotein XCAW_00366 PF00692 dUTPase XCAW_00367 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XCAW_00367 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XCAW_00367 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XCAW_00367 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XCAW_00370 PF00535 Glycosyl transferase family 2 XCAW_00371 PF01370 NAD dependent epimerase/dehydratase family XCAW_00373 PF02195 ParB-like nuclease domain XCAW_00373 PF17762 HTH domain found in ParB protein XCAW_00374 PF13614 AAA domain XCAW_00376 PF00156 Phosphoribosyl transferase domain XCAW_00377 PF03372 Endonuclease/Exonuclease/phosphatase family XCAW_00378 PF07690 Major Facilitator Superfamily XCAW_00380 PF03702 Anhydro-N-acetylmuramic acid kinase XCAW_00381 PF04225 Opacity-associated protein A LysM-like domain XCAW_00381 PF01551 Peptidase family M23 XCAW_00382 PF00579 tRNA synthetases class I (W and Y) XCAW_00388 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain XCAW_00388 PF06827 Zinc finger found in FPG and IleRS XCAW_00388 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain XCAW_00390 PF04349 Periplasmic glucan biosynthesis protein, MdoG XCAW_00391 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_00391 PF00360 Phytochrome region XCAW_00391 PF08446 PAS fold XCAW_00391 PF01590 GAF domain XCAW_00391 PF00512 His Kinase A (phospho-acceptor) domain XCAW_00392 PF00265 Thymidine kinase XCAW_00393 PF00580 UvrD/REP helicase N-terminal domain XCAW_00393 PF13361 UvrD-like helicase C-terminal domain XCAW_00396 PF04337 Protein of unknown function, DUF480 XCAW_00397 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) XCAW_00398 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family XCAW_00399 PF04820 Tryptophan halogenase XCAW_00402 PF00356 Bacterial regulatory proteins, lacI family XCAW_00404 PF01553 Acyltransferase XCAW_00405 PF08240 Alcohol dehydrogenase GroES-like domain XCAW_00405 PF16197 Ketoacyl-synthetase C-terminal extension XCAW_00405 PF02801 Beta-ketoacyl synthase, C-terminal domain XCAW_00405 PF00109 Beta-ketoacyl synthase, N-terminal domain XCAW_00405 PF08659 KR domain XCAW_00405 PF00550 Phosphopantetheine attachment site XCAW_00405 PF14765 Polyketide synthase dehydratase XCAW_00405 PF00698 Acyl transferase domain XCAW_00405 PF00107 Zinc-binding dehydrogenase XCAW_00411 PF00665 Integrase core domain XCAW_00411 PF02796 Helix-turn-helix domain of resolvase XCAW_00412 PF01695 IstB-like ATP binding protein XCAW_00414 PF00150 Cellulase (glycosyl hydrolase family 5) XCAW_00415 PF00107 Zinc-binding dehydrogenase XCAW_00415 PF08240 Alcohol dehydrogenase GroES-like domain XCAW_00416 PF07992 Pyridine nucleotide-disulphide oxidoreductase XCAW_00416 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster XCAW_00417 PF00310 Glutamine amidotransferases class-II XCAW_00417 PF04898 Glutamate synthase central domain XCAW_00417 PF01493 GXGXG motif XCAW_00417 PF01645 Conserved region in glutamate synthase XCAW_00421 PF01804 Penicillin amidase XCAW_00424 PF03466 LysR substrate binding domain XCAW_00424 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCAW_00428 PF02397 Bacterial sugar transferase XCAW_00429 PF02350 UDP-N-acetylglucosamine 2-epimerase XCAW_00431 PF03808 Glycosyl transferase WecB/TagA/CpsF family XCAW_00432 PF13439 Glycosyltransferase Family 4 XCAW_00432 PF00534 Glycosyl transferases group 1 XCAW_00438 PF13537 Glutamine amidotransferase domain XCAW_00438 PF00733 Asparagine synthase XCAW_00441 PF16363 GDP-mannose 4,6 dehydratase XCAW_00444 PF00664 ABC transporter transmembrane region XCAW_00444 PF00005 ABC transporter XCAW_00447 PF13537 Glutamine amidotransferase domain XCAW_00447 PF00733 Asparagine synthase XCAW_00452 PF00685 Sulfotransferase domain XCAW_00467 PF00271 Helicase conserved C-terminal domain XCAW_00467 PF00270 DEAD/DEAH box helicase XCAW_00467 PF09369 Domain of unknown function (DUF1998) XCAW_00468 PF03006 Haemolysin-III related XCAW_00470 PF00106 short chain dehydrogenase XCAW_00472 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCAW_00472 PF03466 LysR substrate binding domain XCAW_00476 PF02525 Flavodoxin-like fold XCAW_00478 PF01527 Transposase XCAW_00479 PF13333 Integrase core domain XCAW_00479 PF13276 HTH-like domain XCAW_00479 PF00665 Integrase core domain XCAW_00489 PF05532 CsbD-like XCAW_00493 PF02868 Thermolysin metallopeptidase, alpha-helical domain XCAW_00493 PF01447 Thermolysin metallopeptidase, catalytic domain XCAW_00493 PF16485 Protealysin propeptide XCAW_00495 PF13344 Haloacid dehalogenase-like hydrolase XCAW_00495 PF00293 NUDIX domain XCAW_00498 PF00085 Thioredoxin XCAW_00499 PF00083 Sugar (and other) transporter XCAW_00499 PF08946 Osmosensory transporter coiled coil XCAW_00507 PF17863 AAA lid domain XCAW_00507 PF07726 ATPase family associated with various cellular activities (AAA) XCAW_00513 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain XCAW_00514 PF00155 Aminotransferase class I and II XCAW_00515 PF00593 TonB dependent receptor XCAW_00515 PF07715 TonB-dependent Receptor Plug Domain XCAW_00517 PF07883 Cupin domain XCAW_00518 PF00171 Aldehyde dehydrogenase family XCAW_00522 PF02735 Ku70/Ku80 beta-barrel domain XCAW_00523 PF01070 FMN-dependent dehydrogenase XCAW_00524 PF00144 Beta-lactamase XCAW_00525 PF07730 Histidine kinase XCAW_00526 PF00196 Bacterial regulatory proteins, luxR family XCAW_00526 PF00072 Response regulator receiver domain XCAW_00530 PF00486 Transcriptional regulatory protein, C terminal XCAW_00530 PF18500 CadC C-terminal domain 1 XCAW_00531 PF12241 Trans-2-enoyl-CoA reductase catalytic region XCAW_00531 PF07055 Enoyl reductase FAD binding domain XCAW_00531 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase XCAW_00533 PF00294 pfkB family carbohydrate kinase XCAW_00546 PF01527 Transposase XCAW_00547 PF13276 HTH-like domain XCAW_00547 PF00665 Integrase core domain XCAW_00547 PF13333 Integrase core domain XCAW_00548 PF11896 Domain of unknown function (DUF3416) XCAW_00548 PF00128 Alpha amylase, catalytic domain XCAW_00549 PF00128 Alpha amylase, catalytic domain XCAW_00549 PF16657 Maltogenic Amylase, C-terminal domain XCAW_00550 PF02806 Alpha amylase, C-terminal all-beta domain XCAW_00550 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) XCAW_00550 PF00128 Alpha amylase, catalytic domain XCAW_00552 PF00248 Aldo/keto reductase family XCAW_00553 PF00135 Carboxylesterase family XCAW_00554 PF13472 GDSL-like Lipase/Acylhydrolase family XCAW_00554 PF07859 alpha/beta hydrolase fold XCAW_00556 PF03480 Bacterial extracellular solute-binding protein, family 7 XCAW_00558 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component XCAW_00559 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain XCAW_00559 PF04616 Glycosyl hydrolases family 43 XCAW_00560 PF00356 Bacterial regulatory proteins, lacI family XCAW_00562 PF04962 KduI/IolB family XCAW_00565 PF00657 GDSL-like Lipase/Acylhydrolase XCAW_00569 PF00351 Biopterin-dependent aromatic amino acid hydroxylase XCAW_00570 PF01037 Lrp/AsnC ligand binding domain XCAW_00571 PF00593 TonB dependent receptor XCAW_00571 PF07660 Secretin and TonB N terminus short domain XCAW_00571 PF07715 TonB-dependent Receptor Plug Domain XCAW_00573 PF01734 Patatin-like phospholipase XCAW_00575 PF00005 ABC transporter XCAW_00578 PF00005 ABC transporter XCAW_00579 PF00528 Binding-protein-dependent transport system inner membrane component XCAW_00581 PF12867 DinB superfamily XCAW_00581 PF03781 Sulfatase-modifying factor enzyme 1 XCAW_00584 PF01381 Helix-turn-helix XCAW_00588 PF10609 NUBPL iron-transfer P-loop NTPase XCAW_00588 PF01883 Iron-sulfur cluster assembly protein XCAW_00591 PF13091 PLD-like domain XCAW_00592 PF03061 Thioesterase superfamily XCAW_00600 PF02673 Bacitracin resistance protein BacA XCAW_00601 PF03951 Glutamine synthetase, beta-Grasp domain XCAW_00601 PF00120 Glutamine synthetase, catalytic domain XCAW_00602 PF00543 Nitrogen regulatory protein P-II XCAW_00603 PF00909 Ammonium Transporter Family XCAW_00604 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_00604 PF00512 His Kinase A (phospho-acceptor) domain XCAW_00604 PF00989 PAS fold XCAW_00605 PF02954 Bacterial regulatory protein, Fis family XCAW_00605 PF00158 Sigma-54 interaction domain XCAW_00605 PF00072 Response regulator receiver domain XCAW_00606 PF00080 Copper/zinc superoxide dismutase (SODC) XCAW_00607 PF00080 Copper/zinc superoxide dismutase (SODC) XCAW_00610 PF00108 Thiolase, N-terminal domain XCAW_00610 PF02803 Thiolase, C-terminal domain XCAW_00617 PF00581 Rhodanese-like domain XCAW_00618 PF02556 Preprotein translocase subunit SecB XCAW_00619 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus XCAW_00619 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus XCAW_00621 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XCAW_00621 PF00205 Thiamine pyrophosphate enzyme, central domain XCAW_00621 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain XCAW_00622 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_00623 PF00158 Sigma-54 interaction domain XCAW_00623 PF00072 Response regulator receiver domain XCAW_00623 PF02954 Bacterial regulatory protein, Fis family XCAW_00626 PF07690 Major Facilitator Superfamily XCAW_00627 PF00588 SpoU rRNA Methylase family XCAW_00631 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XCAW_00631 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XCAW_00632 PF13784 Fic/DOC family N-terminal XCAW_00632 PF02661 Fic/DOC family XCAW_00633 PF00561 alpha/beta hydrolase fold XCAW_00634 PF03692 Putative zinc- or iron-chelating domain XCAW_00635 PF00501 AMP-binding enzyme XCAW_00636 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family XCAW_00638 PF01820 D-ala D-ala ligase N-terminus XCAW_00638 PF07478 D-ala D-ala ligase C-terminus XCAW_00640 PF03109 ABC1 family XCAW_00642 PF00849 RNA pseudouridylate synthase XCAW_00645 PF00472 RF-1 domain XCAW_00647 PF01112 Asparaginase XCAW_00648 PF01432 Peptidase family M3 XCAW_00649 PF12706 Beta-lactamase superfamily domain XCAW_00652 PF12833 Helix-turn-helix domain XCAW_00653 PF00999 Sodium/hydrogen exchanger family XCAW_00654 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCAW_00654 PF03466 LysR substrate binding domain XCAW_00655 PF01274 Malate synthase XCAW_00656 PF00463 Isocitrate lyase family XCAW_00658 PF00990 Diguanylate cyclase, GGDEF domain XCAW_00662 PF00326 Prolyl oligopeptidase family XCAW_00663 PF02785 Biotin carboxylase C-terminal domain XCAW_00663 PF00289 Biotin carboxylase, N-terminal domain XCAW_00663 PF00364 Biotin-requiring enzyme XCAW_00663 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XCAW_00664 PF01039 Carboxyl transferase domain XCAW_00665 PF02770 Acyl-CoA dehydrogenase, middle domain XCAW_00665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XCAW_00665 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XCAW_00676 PF07683 Cobalamin synthesis protein cobW C-terminal domain XCAW_00676 PF02492 CobW/HypB/UreG, nucleotide-binding domain XCAW_00680 PF03969 AFG1-like ATPase XCAW_00681 PF01047 MarR family XCAW_00682 PF02566 OsmC-like protein XCAW_00687 PF00107 Zinc-binding dehydrogenase XCAW_00687 PF16884 N-terminal domain of oxidoreductase XCAW_00690 PF00849 RNA pseudouridylate synthase XCAW_00693 PF00270 DEAD/DEAH box helicase XCAW_00693 PF08482 ATP-dependent helicase C-terminal XCAW_00693 PF00271 Helicase conserved C-terminal domain XCAW_00693 PF04408 Helicase associated domain (HA2) XCAW_00694 PF07308 Protein of unknown function (DUF1456) XCAW_00695 PF00576 HIUase/Transthyretin family XCAW_00696 PF13454 FAD-NAD(P)-binding XCAW_00697 PF01014 Uricase XCAW_00697 PF09349 OHCU decarboxylase XCAW_00700 PF00266 Aminotransferase class-V XCAW_00701 PF01546 Peptidase family M20/M25/M40 XCAW_00701 PF07687 Peptidase dimerisation domain XCAW_00703 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCAW_00703 PF03466 LysR substrate binding domain XCAW_00704 PF07690 Major Facilitator Superfamily XCAW_00708 PF01425 Amidase XCAW_00709 PF01156 Inosine-uridine preferring nucleoside hydrolase XCAW_00711 PF00860 Permease family XCAW_00712 PF00111 2Fe-2S iron-sulfur cluster binding domain XCAW_00713 PF00355 Rieske [2Fe-2S] domain XCAW_00714 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCAW_00714 PF03466 LysR substrate binding domain XCAW_00716 PF01026 TatD related DNase XCAW_00719 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCAW_00719 PF03466 LysR substrate binding domain XCAW_00720 PF07690 Major Facilitator Superfamily XCAW_00722 PF00561 alpha/beta hydrolase fold XCAW_00723 PF02146 Sir2 family XCAW_00724 PF00724 NADH:flavin oxidoreductase / NADH oxidase family XCAW_00725 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase XCAW_00725 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase XCAW_00727 PF00551 Formyl transferase XCAW_00728 PF00072 Response regulator receiver domain XCAW_00728 PF00486 Transcriptional regulatory protein, C terminal XCAW_00729 PF00672 HAMP domain XCAW_00729 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_00729 PF00512 His Kinase A (phospho-acceptor) domain XCAW_00730 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XCAW_00730 PF00529 HlyD membrane-fusion protein of T1SS XCAW_00731 PF00873 AcrB/AcrD/AcrF family XCAW_00732 PF02321 Outer membrane efflux protein XCAW_00735 PF02219 Methylenetetrahydrofolate reductase XCAW_00736 PF02677 Epoxyqueuosine reductase QueH XCAW_00737 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCAW_00737 PF03466 LysR substrate binding domain XCAW_00738 PF03358 NADPH-dependent FMN reductase XCAW_00740 PF01717 Cobalamin-independent synthase, Catalytic domain XCAW_00740 PF08267 Cobalamin-independent synthase, N-terminal domain XCAW_00741 PF03812 2-keto-3-deoxygluconate permease XCAW_00743 PF05368 NmrA-like family XCAW_00744 PF01638 HxlR-like helix-turn-helix XCAW_00748 PF13276 HTH-like domain XCAW_00748 PF00665 Integrase core domain XCAW_00748 PF13333 Integrase core domain XCAW_00749 PF01527 Transposase XCAW_00750 PF00589 Phage integrase family XCAW_00750 PF13495 Phage integrase, N-terminal SAM-like domain XCAW_00751 PF00920 Dehydratase family XCAW_00754 PF00132 Bacterial transferase hexapeptide (six repeats) XCAW_00755 PF07690 Major Facilitator Superfamily XCAW_00756 PF01966 HD domain XCAW_00756 PF11871 Domain of unknown function (DUF3391) XCAW_00760 PF00171 Aldehyde dehydrogenase family XCAW_00762 PF01494 FAD binding domain XCAW_00765 PF00370 FGGY family of carbohydrate kinases, N-terminal domain XCAW_00765 PF02782 FGGY family of carbohydrate kinases, C-terminal domain XCAW_00766 PF00230 Major intrinsic protein XCAW_00767 PF16901 C-terminal domain of alpha-glycerophosphate oxidase XCAW_00767 PF01266 FAD dependent oxidoreductase XCAW_00768 PF00455 DeoR C terminal sensor domain XCAW_00768 PF08220 DeoR-like helix-turn-helix domain XCAW_00770 PF00355 Rieske [2Fe-2S] domain XCAW_00771 PF01144 Coenzyme A transferase XCAW_00772 PF01144 Coenzyme A transferase XCAW_00773 PF02803 Thiolase, C-terminal domain XCAW_00773 PF00108 Thiolase, N-terminal domain XCAW_00774 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal XCAW_00774 PF00775 Dioxygenase XCAW_00776 PF10397 Adenylosuccinate lyase C-terminus XCAW_00776 PF00206 Lyase XCAW_00777 PF12146 Serine aminopeptidase, S33 XCAW_00778 PF02627 Carboxymuconolactone decarboxylase family XCAW_00780 PF09339 IclR helix-turn-helix domain XCAW_00780 PF01614 Bacterial transcriptional regulator XCAW_00782 PF07859 alpha/beta hydrolase fold XCAW_00783 PF10677 Protein of unknown function (DUF2490) XCAW_00784 PF01134 Glucose inhibited division protein A XCAW_00784 PF13932 GidA associated domain XCAW_00786 PF00291 Pyridoxal-phosphate dependent enzyme XCAW_00790 PF13649 Methyltransferase domain XCAW_00792 PF12697 Alpha/beta hydrolase family XCAW_00794 PF00155 Aminotransferase class I and II XCAW_00796 PF06968 Biotin and Thiamin Synthesis associated domain XCAW_00796 PF04055 Radical SAM superfamily XCAW_00797 PF01040 UbiA prenyltransferase family XCAW_00802 PF05819 NolX protein XCAW_00811 PF01313 Bacterial export proteins, family 3 XCAW_00812 PF00813 FliP family XCAW_00815 PF00771 FHIPEP family XCAW_00816 PF01312 FlhB HrpN YscU SpaS Family XCAW_00819 PF01514 Secretory protein of YscJ/FliF family XCAW_00822 PF18269 T3SS EscN ATPase C-terminal domain XCAW_00822 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XCAW_00822 PF02874 ATP synthase alpha/beta family, beta-barrel domain XCAW_00824 PF01311 Bacterial export proteins, family 1 XCAW_00827 PF01464 Transglycosylase SLT domain XCAW_00831 PF00924 Mechanosensitive ion channel XCAW_00831 PF12794 Mechanosensitive ion channel inner membrane domain 1 XCAW_00831 PF12795 Mechanosensitive ion channel porin domain XCAW_00832 PF00884 Sulfatase XCAW_00834 PF05661 Protein of unknown function (DUF808) XCAW_00835 PF00990 Diguanylate cyclase, GGDEF domain XCAW_00835 PF00072 Response regulator receiver domain XCAW_00836 PF08323 Starch synthase catalytic domain XCAW_00836 PF00534 Glycosyl transferases group 1 XCAW_00837 PF00128 Alpha amylase, catalytic domain XCAW_00837 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) XCAW_00837 PF02806 Alpha amylase, C-terminal all-beta domain XCAW_00838 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) XCAW_00838 PF00128 Alpha amylase, catalytic domain XCAW_00838 PF11941 Domain of unknown function (DUF3459) XCAW_00839 PF02446 4-alpha-glucanotransferase XCAW_00840 PF00128 Alpha amylase, catalytic domain XCAW_00842 PF00128 Alpha amylase, catalytic domain XCAW_00842 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) XCAW_00843 PF13460 NAD(P)H-binding XCAW_00846 PF06903 VirK protein XCAW_00847 PF02321 Outer membrane efflux protein XCAW_00850 PF00873 AcrB/AcrD/AcrF family XCAW_00853 PF00270 DEAD/DEAH box helicase XCAW_00853 PF00271 Helicase conserved C-terminal domain XCAW_00854 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XCAW_00854 PF00364 Biotin-requiring enzyme XCAW_00854 PF02817 e3 binding domain XCAW_00856 PF02780 Transketolase, C-terminal domain XCAW_00856 PF02779 Transketolase, pyrimidine binding domain XCAW_00857 PF00676 Dehydrogenase E1 component XCAW_00859 PF03301 Tryptophan 2,3-dioxygenase XCAW_00860 PF00854 POT family XCAW_00862 PF01047 MarR family XCAW_00863 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XCAW_00864 PF04480 Protein of unknown function (DUF559) XCAW_00865 PF04209 homogentisate 1,2-dioxygenase XCAW_00868 PF03334 Na+/H+ antiporter subunit XCAW_00869 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) XCAW_00871 PF00361 Proton-conducting membrane transporter XCAW_00872 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L XCAW_00873 PF00361 Proton-conducting membrane transporter XCAW_00873 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus XCAW_00873 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter XCAW_00873 PF13244 Domain of unknown function (DUF4040) XCAW_00876 PF07504 Fungalysin/Thermolysin Propeptide Motif XCAW_00876 PF01447 Thermolysin metallopeptidase, catalytic domain XCAW_00876 PF02868 Thermolysin metallopeptidase, alpha-helical domain XCAW_00876 PF01483 Proprotein convertase P-domain XCAW_00877 PF00182 Chitinase class I XCAW_00881 PF01259 SAICAR synthetase XCAW_00882 PF00226 DnaJ domain XCAW_00882 PF05099 Tellurite resistance protein TerB XCAW_00884 PF00834 Ribulose-phosphate 3 epimerase family XCAW_00886 PF00781 Diacylglycerol kinase catalytic domain XCAW_00887 PF04715 Anthranilate synthase component I, N terminal region XCAW_00887 PF00425 chorismate binding enzyme XCAW_00890 PF00117 Glutamine amidotransferase class-I XCAW_00892 PF00591 Glycosyl transferase family, a/b domain XCAW_00892 PF02885 Glycosyl transferase family, helical bundle domain XCAW_00893 PF00218 Indole-3-glycerol phosphate synthase XCAW_00895 PF00325 Bacterial regulatory proteins, crp family XCAW_00895 PF00027 Cyclic nucleotide-binding domain XCAW_00896 PF02675 S-adenosylmethionine decarboxylase XCAW_00897 PF00893 Small Multidrug Resistance protein XCAW_00898 PF03232 Ubiquinone biosynthesis protein COQ7 XCAW_00900 PF00572 Ribosomal protein L13 XCAW_00901 PF00380 Ribosomal protein S9/S16 XCAW_00904 PF00293 NUDIX domain XCAW_00906 PF00210 Ferritin-like domain XCAW_00907 PF00672 HAMP domain XCAW_00907 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_00907 PF00512 His Kinase A (phospho-acceptor) domain XCAW_00907 PF01627 Hpt domain XCAW_00907 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) XCAW_00907 PF00072 Response regulator receiver domain XCAW_00908 PF00072 Response regulator receiver domain XCAW_00908 PF00486 Transcriptional regulatory protein, C terminal XCAW_00912 PF01521 Iron-sulphur cluster biosynthesis XCAW_00915 PF09297 NADH pyrophosphatase zinc ribbon domain XCAW_00915 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain XCAW_00915 PF00293 NUDIX domain XCAW_00916 PF03186 CobD/Cbib protein XCAW_00916 PF17113 Regulatory signalling modulator protein AmpE XCAW_00919 PF07690 Major Facilitator Superfamily XCAW_00920 PF03466 LysR substrate binding domain XCAW_00920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCAW_00921 PF07690 Major Facilitator Superfamily XCAW_00922 PF12805 FUSC-like inner membrane protein yccS XCAW_00923 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain XCAW_00923 PF02843 Phosphoribosylglycinamide synthetase, C domain XCAW_00923 PF02844 Phosphoribosylglycinamide synthetase, N domain XCAW_00925 PF01808 AICARFT/IMPCHase bienzyme XCAW_00925 PF02142 MGS-like domain XCAW_00926 PF01066 CDP-alcohol phosphatidyltransferase XCAW_00927 PF12146 Serine aminopeptidase, S33 XCAW_00927 PF12147 Putative methyltransferase XCAW_00928 PF00782 Dual specificity phosphatase, catalytic domain XCAW_00934 PF02954 Bacterial regulatory protein, Fis family XCAW_00936 PF01381 Helix-turn-helix XCAW_00942 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XCAW_00942 PF00289 Biotin carboxylase, N-terminal domain XCAW_00942 PF02785 Biotin carboxylase C-terminal domain XCAW_00944 PF00364 Biotin-requiring enzyme XCAW_00945 PF01220 Dehydroquinase class II XCAW_00946 PF11412 Disulphide bond corrector protein DsbC XCAW_00946 PF02683 Cytochrome C biogenesis protein transmembrane region XCAW_00947 PF03091 CutA1 divalent ion tolerance protein XCAW_00949 PF01852 START domain XCAW_00952 PF00106 short chain dehydrogenase XCAW_00953 PF04231 Endonuclease I XCAW_00954 PF00166 Chaperonin 10 Kd subunit XCAW_00955 PF00118 TCP-1/cpn60 chaperonin family XCAW_00957 PF00593 TonB dependent receptor XCAW_00957 PF07715 TonB-dependent Receptor Plug Domain XCAW_00958 PF00793 DAHP synthetase I family XCAW_00961 PF08450 SMP-30/Gluconolactonase/LRE-like region XCAW_00963 PF03710 Glutamate-ammonia ligase adenylyltransferase XCAW_00963 PF08335 GlnD PII-uridylyltransferase XCAW_00964 PF02592 Putative vitamin uptake transporter XCAW_00968 PF00881 Nitroreductase family XCAW_00969 PF04264 YceI-like domain XCAW_00974 PF16957 Malonate decarboxylase, alpha subunit, transporter XCAW_00975 PF06857 Malonate decarboxylase delta subunit (MdcD) XCAW_00976 PF01039 Carboxyl transferase domain XCAW_00978 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG XCAW_00979 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase XCAW_00980 PF00698 Acyl transferase domain XCAW_00982 PF07729 FCD domain XCAW_00982 PF00392 Bacterial regulatory proteins, gntR family XCAW_00983 PF13419 Haloacid dehalogenase-like hydrolase XCAW_00989 PF07745 Glycosyl hydrolase family 53 XCAW_00990 PF00456 Transketolase, thiamine diphosphate binding domain XCAW_00990 PF17831 Pyruvate dehydrogenase E1 component middle domain XCAW_00991 PF00145 C-5 cytosine-specific DNA methylase XCAW_00992 PF00665 Integrase core domain XCAW_00992 PF13276 HTH-like domain XCAW_00992 PF13333 Integrase core domain XCAW_00993 PF01527 Transposase XCAW_00994 PF00106 short chain dehydrogenase XCAW_00997 PF00106 short chain dehydrogenase XCAW_00999 PF13409 Glutathione S-transferase, N-terminal domain XCAW_01005 PF01527 Transposase XCAW_01006 PF13333 Integrase core domain XCAW_01006 PF13276 HTH-like domain XCAW_01006 PF00665 Integrase core domain XCAW_01008 PF01433 Peptidase family M1 domain XCAW_01008 PF11838 ERAP1-like C-terminal domain XCAW_01010 PF08032 RNA 2'-O ribose methyltransferase substrate binding XCAW_01010 PF00588 SpoU rRNA Methylase family XCAW_01011 PF00135 Carboxylesterase family XCAW_01013 PF10566 Glycoside hydrolase 97 XCAW_01013 PF14508 Glycosyl-hydrolase 97 N-terminal XCAW_01013 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation XCAW_01014 PF02837 Glycosyl hydrolases family 2, sugar binding domain XCAW_01014 PF00703 Glycosyl hydrolases family 2 XCAW_01014 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain XCAW_01016 PF00356 Bacterial regulatory proteins, lacI family XCAW_01018 PF01741 Large-conductance mechanosensitive channel, MscL XCAW_01019 PF01557 Fumarylacetoacetate (FAA) hydrolase family XCAW_01022 PF02080 TrkA-C domain XCAW_01022 PF03600 Citrate transporter XCAW_01023 PF02390 Putative methyltransferase XCAW_01024 PF05690 Thiazole biosynthesis protein ThiG XCAW_01026 PF00657 GDSL-like Lipase/Acylhydrolase XCAW_01026 PF03797 Autotransporter beta-domain XCAW_01032 PF03527 RHS protein XCAW_01032 PF05593 RHS Repeat XCAW_01038 PF05973 Phage derived protein Gp49-like (DUF891) XCAW_01049 PF04002 RadC-like JAB domain XCAW_01050 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system XCAW_01057 PF01555 DNA methylase XCAW_01062 PF00665 Integrase core domain XCAW_01062 PF02796 Helix-turn-helix domain of resolvase XCAW_01063 PF01695 IstB-like ATP binding protein XCAW_01075 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) XCAW_01075 PF00128 Alpha amylase, catalytic domain XCAW_01078 PF00486 Transcriptional regulatory protein, C terminal XCAW_01078 PF00072 Response regulator receiver domain XCAW_01079 PF00512 His Kinase A (phospho-acceptor) domain XCAW_01079 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_01079 PF16736 Single Cache-like XCAW_01079 PF00989 PAS fold XCAW_01080 PF13276 HTH-like domain XCAW_01080 PF00665 Integrase core domain XCAW_01080 PF13333 Integrase core domain XCAW_01081 PF01527 Transposase XCAW_01085 PF01121 Dephospho-CoA kinase XCAW_01086 PF06750 Bacterial Peptidase A24 N-terminal domain XCAW_01086 PF01478 Type IV leader peptidase family XCAW_01088 PF00114 Pilin (bacterial filament) XCAW_01088 PF07963 Prokaryotic N-terminal methylation motif XCAW_01089 PF00114 Pilin (bacterial filament) XCAW_01089 PF07963 Prokaryotic N-terminal methylation motif XCAW_01090 PF00437 Type II/IV secretion system protein XCAW_01090 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain XCAW_01091 PF00072 Response regulator receiver domain XCAW_01091 PF00158 Sigma-54 interaction domain XCAW_01091 PF02954 Bacterial regulatory protein, Fis family XCAW_01092 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_01092 PF00512 His Kinase A (phospho-acceptor) domain XCAW_01093 PF00549 CoA-ligase XCAW_01093 PF08442 ATP-grasp domain XCAW_01094 PF02629 CoA binding domain XCAW_01094 PF00549 CoA-ligase XCAW_01099 PF01129 NAD:arginine ADP-ribosyltransferase XCAW_01101 PF02796 Helix-turn-helix domain of resolvase XCAW_01101 PF00665 Integrase core domain XCAW_01113 PF01527 Transposase XCAW_01114 PF13333 Integrase core domain XCAW_01114 PF00665 Integrase core domain XCAW_01114 PF13276 HTH-like domain XCAW_01148 PF00158 Sigma-54 interaction domain XCAW_01148 PF00072 Response regulator receiver domain XCAW_01148 PF02954 Bacterial regulatory protein, Fis family XCAW_01149 PF00072 Response regulator receiver domain XCAW_01149 PF13426 PAS domain XCAW_01149 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_01150 PF00072 Response regulator receiver domain XCAW_01150 PF00486 Transcriptional regulatory protein, C terminal XCAW_01166 PF01695 IstB-like ATP binding protein XCAW_01169 PF11798 IMS family HHH motif XCAW_01169 PF11799 impB/mucB/samB family C-terminal domain XCAW_01169 PF13438 Domain of unknown function (DUF4113) XCAW_01169 PF00817 impB/mucB/samB family XCAW_01170 PF00717 Peptidase S24-like XCAW_01171 PF01339 CheB methylesterase XCAW_01171 PF00072 Response regulator receiver domain XCAW_01172 PF00512 His Kinase A (phospho-acceptor) domain XCAW_01172 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_01172 PF00989 PAS fold XCAW_01174 PF05698 Bacterial trigger factor protein (TF) C-terminus XCAW_01174 PF05697 Bacterial trigger factor protein (TF) XCAW_01175 PF00574 Clp protease XCAW_01177 PF10431 C-terminal, D2-small domain, of ClpB protein XCAW_01177 PF06689 ClpX C4-type zinc finger XCAW_01177 PF07724 AAA domain (Cdc48 subfamily) XCAW_01178 PF02190 ATP-dependent protease La (LON) substrate-binding domain XCAW_01178 PF05362 Lon protease (S16) C-terminal proteolytic domain XCAW_01178 PF00004 ATPase family associated with various cellular activities (AAA) XCAW_01179 PF00216 Bacterial DNA-binding protein XCAW_01184 PF05257 CHAP domain XCAW_01184 PF01476 LysM domain XCAW_01185 PF00753 Metallo-beta-lactamase superfamily XCAW_01185 PF16123 Hydroxyacylglutathione hydrolase C-terminus XCAW_01187 PF00075 RNase H XCAW_01188 PF00929 Exonuclease XCAW_01192 PF01075 Glycosyltransferase family 9 (heptosyltransferase) XCAW_01194 PF00753 Metallo-beta-lactamase superfamily XCAW_01194 PF12706 Beta-lactamase superfamily domain XCAW_01195 PF04055 Radical SAM superfamily XCAW_01195 PF06463 Molybdenum Cofactor Synthesis C XCAW_01196 PF01967 MoaC family XCAW_01197 PF02597 ThiS family XCAW_01198 PF02391 MoaE protein XCAW_01200 PF01527 Transposase XCAW_01201 PF13276 HTH-like domain XCAW_01201 PF00665 Integrase core domain XCAW_01201 PF13333 Integrase core domain XCAW_01208 PF12170 DNA polymerase III tau subunit V interacting with alpha XCAW_01208 PF12169 DNA polymerase III subunits gamma and tau domain III XCAW_01208 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding XCAW_01209 PF02575 YbaB/EbfC DNA-binding family XCAW_01210 PF13662 Toprim domain XCAW_01210 PF02132 RecR protein XCAW_01211 PF01230 HIT domain XCAW_01213 PF11992 Domain of unknown function (DUF3488) XCAW_01213 PF13559 Domain of unknown function (DUF4129) XCAW_01213 PF01841 Transglutaminase-like superfamily XCAW_01215 PF07726 ATPase family associated with various cellular activities (AAA) XCAW_01215 PF17863 AAA lid domain XCAW_01220 PF02545 Maf-like protein XCAW_01221 PF02620 Large ribosomal RNA subunit accumulation protein YceD XCAW_01222 PF01783 Ribosomal L32p protein family XCAW_01223 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XCAW_01223 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XCAW_01226 PF00698 Acyl transferase domain XCAW_01228 PF00550 Phosphopantetheine attachment site XCAW_01229 PF02801 Beta-ketoacyl synthase, C-terminal domain XCAW_01229 PF00109 Beta-ketoacyl synthase, N-terminal domain XCAW_01230 PF00425 chorismate binding enzyme XCAW_01230 PF04715 Anthranilate synthase component I, N terminal region XCAW_01231 PF02618 YceG-like family XCAW_01232 PF09115 DNA polymerase III, delta subunit, C terminal XCAW_01236 PF02954 Bacterial regulatory protein, Fis family XCAW_01236 PF06506 Propionate catabolism activator XCAW_01236 PF00158 Sigma-54 interaction domain XCAW_01238 PF00285 Citrate synthase, C-terminal domain XCAW_01239 PF00694 Aconitase C-terminal domain XCAW_01239 PF00330 Aconitase family (aconitate hydratase) XCAW_01240 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH XCAW_01242 PF04303 PrpF protein XCAW_01243 PF00593 TonB dependent receptor XCAW_01243 PF07715 TonB-dependent Receptor Plug Domain XCAW_01245 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain XCAW_01245 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain XCAW_01245 PF11974 Bacterial alpha-2-macroglobulin MG3 domain XCAW_01245 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain XCAW_01245 PF17962 Bacterial macroglobulin domain 6 XCAW_01245 PF01835 MG2 domain XCAW_01245 PF00207 Alpha-2-macroglobulin family XCAW_01245 PF07703 Alpha-2-macroglobulin bait region domain XCAW_01249 PF00905 Penicillin binding protein transpeptidase domain XCAW_01249 PF00912 Transglycosylase XCAW_01249 PF06832 Penicillin-Binding Protein C-terminus Family XCAW_01251 PF08534 Redoxin XCAW_01253 PF01556 DnaJ C terminal domain XCAW_01253 PF00226 DnaJ domain XCAW_01254 PF00072 Response regulator receiver domain XCAW_01255 PF01145 SPFH domain / Band 7 family XCAW_01255 PF12221 Bacterial membrane protein N terminal XCAW_01256 PF01145 SPFH domain / Band 7 family XCAW_01258 PF00709 Adenylosuccinate synthetase XCAW_01259 PF01433 Peptidase family M1 domain XCAW_01259 PF11838 ERAP1-like C-terminal domain XCAW_01261 PF00440 Bacterial regulatory proteins, tetR family XCAW_01270 PF18766 SWI2/SNF2 ATPase XCAW_01270 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) XCAW_01270 PF11867 Domain of unknown function (DUF3387) XCAW_01275 PF00300 Histidine phosphatase superfamily (branch 1) XCAW_01275 PF13456 Reverse transcriptase-like XCAW_01276 PF01256 Carbohydrate kinase XCAW_01278 PF00723 Glycosyl hydrolases family 15 XCAW_01280 PF07971 Glycosyl hydrolase family 92 XCAW_01280 PF17678 Glycosyl hydrolase family 92 N-terminal domain XCAW_01283 PF07992 Pyridine nucleotide-disulphide oxidoreductase XCAW_01287 PF17755 UvrA DNA-binding domain XCAW_01288 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain XCAW_01288 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase XCAW_01289 PF00941 FAD binding domain in molybdopterin dehydrogenase XCAW_01289 PF03450 CO dehydrogenase flavoprotein C-terminal domain XCAW_01290 PF01799 [2Fe-2S] binding domain XCAW_01290 PF00111 2Fe-2S iron-sulfur cluster binding domain XCAW_01297 PF01726 LexA DNA binding domain XCAW_01297 PF00717 Peptidase S24-like XCAW_01300 PF14579 Helix-hairpin-helix motif XCAW_01300 PF17657 Bacterial DNA polymerase III alpha subunit finger domain XCAW_01300 PF07733 Bacterial DNA polymerase III alpha NTPase domain XCAW_01300 PF02811 PHP domain XCAW_01301 PF00326 Prolyl oligopeptidase family XCAW_01304 PF03169 OPT oligopeptide transporter protein XCAW_01306 PF00326 Prolyl oligopeptidase family XCAW_01306 PF07676 WD40-like Beta Propeller Repeat XCAW_01306 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region XCAW_01309 PF02311 AraC-like ligand binding domain XCAW_01309 PF12833 Helix-turn-helix domain XCAW_01314 PF00270 DEAD/DEAH box helicase XCAW_01314 PF17757 UvrB interaction domain XCAW_01314 PF03461 TRCF domain XCAW_01314 PF02559 CarD-like/TRCF domain XCAW_01314 PF00271 Helicase conserved C-terminal domain XCAW_01316 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ XCAW_01317 PF00072 Response regulator receiver domain XCAW_01317 PF00486 Transcriptional regulatory protein, C terminal XCAW_01318 PF00672 HAMP domain XCAW_01318 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_01318 PF00512 His Kinase A (phospho-acceptor) domain XCAW_01320 PF06123 Inner membrane protein CreD XCAW_01325 PF00749 tRNA synthetases class I (E and Q), catalytic domain XCAW_01326 PF01475 Ferric uptake regulator family XCAW_01328 PF00529 HlyD membrane-fusion protein of T1SS XCAW_01328 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XCAW_01329 PF00873 AcrB/AcrD/AcrF family XCAW_01330 PF02321 Outer membrane efflux protein XCAW_01331 PF16859 Tetracyclin repressor-like, C-terminal domain XCAW_01331 PF00440 Bacterial regulatory proteins, tetR family XCAW_01333 PF06719 AraC-type transcriptional regulator N-terminus XCAW_01333 PF12833 Helix-turn-helix domain XCAW_01335 PF03466 LysR substrate binding domain XCAW_01335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCAW_01336 PF07690 Major Facilitator Superfamily XCAW_01337 PF00248 Aldo/keto reductase family XCAW_01339 PF00082 Subtilase family XCAW_01339 PF01483 Proprotein convertase P-domain XCAW_01341 PF00082 Subtilase family XCAW_01341 PF01483 Proprotein convertase P-domain XCAW_01344 PF07715 TonB-dependent Receptor Plug Domain XCAW_01344 PF00593 TonB dependent receptor XCAW_01347 PF00107 Zinc-binding dehydrogenase XCAW_01347 PF08240 Alcohol dehydrogenase GroES-like domain XCAW_01348 PF00654 Voltage gated chloride channel XCAW_01350 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain XCAW_01350 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain XCAW_01360 PF03880 DbpA RNA binding domain XCAW_01360 PF00270 DEAD/DEAH box helicase XCAW_01360 PF00271 Helicase conserved C-terminal domain XCAW_01361 PF00563 EAL domain XCAW_01361 PF00990 Diguanylate cyclase, GGDEF domain XCAW_01361 PF08448 PAS fold XCAW_01362 PF01479 S4 domain XCAW_01362 PF00849 RNA pseudouridylate synthase XCAW_01363 PF00072 Response regulator receiver domain XCAW_01363 PF00990 Diguanylate cyclase, GGDEF domain XCAW_01366 PF03737 Aldolase/RraA XCAW_01367 PF00144 Beta-lactamase XCAW_01368 PF00999 Sodium/hydrogen exchanger family XCAW_01369 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_01369 PF00512 His Kinase A (phospho-acceptor) domain XCAW_01369 PF00672 HAMP domain XCAW_01370 PF00486 Transcriptional regulatory protein, C terminal XCAW_01370 PF00072 Response regulator receiver domain XCAW_01371 PF02321 Outer membrane efflux protein XCAW_01374 PF00873 AcrB/AcrD/AcrF family XCAW_01376 PF00664 ABC transporter transmembrane region XCAW_01376 PF00005 ABC transporter XCAW_01382 PF03466 LysR substrate binding domain XCAW_01382 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCAW_01384 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD XCAW_01385 PF04070 Domain of unknown function (DUF378) XCAW_01391 PF00085 Thioredoxin XCAW_01393 PF13603 Leucyl-tRNA synthetase, Domain 2 XCAW_01393 PF08264 Anticodon-binding domain of tRNA XCAW_01393 PF00133 tRNA synthetases class I (I, L, M and V) XCAW_01396 PF01467 Cytidylyltransferase-like XCAW_01399 PF02590 Predicted SPOUT methyltransferase XCAW_01401 PF04402 Protein of unknown function (DUF541) XCAW_01402 PF02545 Maf-like protein XCAW_01403 PF00575 S1 RNA binding domain XCAW_01403 PF10150 Ribonuclease E/G family XCAW_01404 PF13116 Protein of unknown function XCAW_01404 PF13502 AsmA-like C-terminal region XCAW_01406 PF01523 Putative modulator of DNA gyrase XCAW_01407 PF04751 Protein of unknown function (DUF615) XCAW_01408 PF01523 Putative modulator of DNA gyrase XCAW_01410 PF14521 Lysine-specific metallo-endopeptidase XCAW_01411 PF00348 Polyprenyl synthetase XCAW_01412 PF02609 Exonuclease VII small subunit XCAW_01413 PF09179 TilS substrate binding domain XCAW_01413 PF11734 TilS substrate C-terminal domain XCAW_01413 PF01171 PP-loop family XCAW_01414 PF00245 Alkaline phosphatase XCAW_01415 PF00375 Sodium:dicarboxylate symporter family XCAW_01418 PF00877 NlpC/P60 family XCAW_01419 PF00877 NlpC/P60 family XCAW_01420 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XCAW_01421 PF04235 Protein of unknown function (DUF418) XCAW_01422 PF01266 FAD dependent oxidoreductase XCAW_01423 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XCAW_01423 PF07992 Pyridine nucleotide-disulphide oxidoreductase XCAW_01424 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain XCAW_01427 PF01431 Peptidase family M13 XCAW_01427 PF05649 Peptidase family M13 XCAW_01428 PF05649 Peptidase family M13 XCAW_01428 PF01431 Peptidase family M13 XCAW_01431 PF07715 TonB-dependent Receptor Plug Domain XCAW_01431 PF00593 TonB dependent receptor XCAW_01432 PF10609 NUBPL iron-transfer P-loop NTPase XCAW_01433 PF00692 dUTPase XCAW_01437 PF01738 Dienelactone hydrolase family XCAW_01438 PF00919 Uncharacterized protein family UPF0004 XCAW_01438 PF04055 Radical SAM superfamily XCAW_01438 PF18693 TRAM domain XCAW_01439 PF03449 Transcription elongation factor, N-terminal XCAW_01439 PF01272 Transcription elongation factor, GreA/GreB, C-term XCAW_01442 PF00293 NUDIX domain XCAW_01443 PF05872 Bacterial protein of unknown function (DUF853) XCAW_01445 PF02666 Phosphatidylserine decarboxylase XCAW_01446 PF02630 SCO1/SenC XCAW_01447 PF05175 Methyltransferase small domain XCAW_01448 PF01264 Chorismate synthase XCAW_01449 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XCAW_01449 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XCAW_01450 PF01118 Semialdehyde dehydrogenase, NAD binding domain XCAW_01450 PF02774 Semialdehyde dehydrogenase, dimerisation domain XCAW_01454 PF01416 tRNA pseudouridine synthase XCAW_01455 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase XCAW_01456 PF03466 LysR substrate binding domain XCAW_01456 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCAW_01457 PF00291 Pyridoxal-phosphate dependent enzyme XCAW_01459 PF00290 Tryptophan synthase alpha chain XCAW_01460 PF17848 Acetyl-coA carboxylase zinc finger domain XCAW_01460 PF01039 Carboxyl transferase domain XCAW_01461 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XCAW_01461 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XCAW_01461 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XCAW_01461 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XCAW_01466 PF00563 EAL domain XCAW_01466 PF00990 Diguanylate cyclase, GGDEF domain XCAW_01466 PF03707 Bacterial signalling protein N terminal repeat XCAW_01469 PF00106 short chain dehydrogenase XCAW_01470 PF00121 Triosephosphate isomerase XCAW_01473 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 XCAW_01474 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit XCAW_01475 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit XCAW_01476 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit XCAW_01478 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit XCAW_01478 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region XCAW_01478 PF10531 SLBB domain XCAW_01479 PF00384 Molybdopterin oxidoreductase XCAW_01479 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region XCAW_01479 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal XCAW_01480 PF00146 NADH dehydrogenase XCAW_01481 PF12838 4Fe-4S dicluster domain XCAW_01482 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 XCAW_01483 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L XCAW_01484 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus XCAW_01484 PF00361 Proton-conducting membrane transporter XCAW_01485 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus XCAW_01485 PF00361 Proton-conducting membrane transporter XCAW_01486 PF00361 Proton-conducting membrane transporter XCAW_01488 PF02576 RimP N-terminal domain XCAW_01488 PF17384 RimP C-terminal SH3 domain XCAW_01489 PF13184 NusA-like KH domain XCAW_01489 PF08529 NusA N-terminal domain XCAW_01489 PF00575 S1 RNA binding domain XCAW_01490 PF04760 Translation initiation factor IF-2, N-terminal region XCAW_01490 PF08364 Bacterial translation initiation factor IF-2 associated region XCAW_01490 PF00009 Elongation factor Tu GTP binding domain XCAW_01490 PF11987 Translation-initiation factor 2 XCAW_01491 PF02033 Ribosome-binding factor A XCAW_01492 PF09157 Pseudouridine synthase II TruB, C-terminal XCAW_01492 PF16198 tRNA pseudouridylate synthase B C-terminal domain XCAW_01492 PF01509 TruB family pseudouridylate synthase (N terminal domain) XCAW_01493 PF00312 Ribosomal protein S15 XCAW_01494 PF00575 S1 RNA binding domain XCAW_01494 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain XCAW_01494 PF00013 KH domain XCAW_01494 PF01138 3' exoribonuclease family, domain 1 XCAW_01494 PF03725 3' exoribonuclease family, domain 2 XCAW_01496 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain XCAW_01496 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain XCAW_01498 PF00731 AIR carboxylase XCAW_01499 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain XCAW_01499 PF02222 ATP-grasp domain XCAW_01500 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain XCAW_01500 PF02777 Iron/manganese superoxide dismutases, C-terminal domain XCAW_01501 PF00462 Glutaredoxin XCAW_01503 PF01914 MarC family integral membrane protein XCAW_01504 PF00593 TonB dependent receptor XCAW_01505 PF11892 Domain of unknown function (DUF3412) XCAW_01505 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases XCAW_01505 PF03641 Possible lysine decarboxylase XCAW_01506 PF07694 5TMR of 5TMR-LYT XCAW_01506 PF06580 Histidine kinase XCAW_01506 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_01511 PF05567 Neisseria PilC beta-propeller domain XCAW_01512 PF07963 Prokaryotic N-terminal methylation motif XCAW_01512 PF00114 Pilin (bacterial filament) XCAW_01514 PF01527 Transposase XCAW_01515 PF13276 HTH-like domain XCAW_01515 PF00665 Integrase core domain XCAW_01515 PF13333 Integrase core domain XCAW_01521 PF04002 RadC-like JAB domain XCAW_01523 PF05284 Protein of unknown function (DUF736) XCAW_01524 PF01381 Helix-turn-helix XCAW_01525 PF01527 Transposase XCAW_01526 PF00665 Integrase core domain XCAW_01526 PF13276 HTH-like domain XCAW_01526 PF13333 Integrase core domain XCAW_01527 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) XCAW_01528 PF00361 Proton-conducting membrane transporter XCAW_01528 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus XCAW_01528 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus XCAW_01529 PF03466 LysR substrate binding domain XCAW_01529 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCAW_01532 PF00072 Response regulator receiver domain XCAW_01532 PF00196 Bacterial regulatory proteins, luxR family XCAW_01535 PF00857 Isochorismatase family XCAW_01537 PF07969 Amidohydrolase family XCAW_01539 PF05977 Transmembrane secretion effector XCAW_01542 PF10414 Sirohaem synthase dimerisation region XCAW_01542 PF14824 Sirohaem biosynthesis protein central XCAW_01542 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XCAW_01543 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XCAW_01545 PF05974 Domain of unknown function (DUF892) XCAW_01548 PF00563 EAL domain XCAW_01548 PF08448 PAS fold XCAW_01548 PF08447 PAS fold XCAW_01548 PF00990 Diguanylate cyclase, GGDEF domain XCAW_01549 PF12951 Passenger-associated-transport-repeat XCAW_01549 PF12951 Passenger-associated-transport-repeat XCAW_01550 PF00196 Bacterial regulatory proteins, luxR family XCAW_01550 PF00072 Response regulator receiver domain XCAW_01551 PF13426 PAS domain XCAW_01551 PF00512 His Kinase A (phospho-acceptor) domain XCAW_01551 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_01551 PF00072 Response regulator receiver domain XCAW_01551 PF08448 PAS fold XCAW_01553 PF00873 AcrB/AcrD/AcrF family XCAW_01554 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XCAW_01555 PF00082 Subtilase family XCAW_01555 PF03797 Autotransporter beta-domain XCAW_01557 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_01557 PF07694 5TMR of 5TMR-LYT XCAW_01557 PF06580 Histidine kinase XCAW_01558 PF04397 LytTr DNA-binding domain XCAW_01558 PF00072 Response regulator receiver domain XCAW_01559 PF00144 Beta-lactamase XCAW_01561 PF07995 Glucose / Sorbosone dehydrogenase XCAW_01562 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XCAW_01564 PF09335 SNARE associated Golgi protein XCAW_01565 PF01494 FAD binding domain XCAW_01566 PF01527 Transposase XCAW_01567 PF13333 Integrase core domain XCAW_01567 PF13276 HTH-like domain XCAW_01567 PF00665 Integrase core domain XCAW_01577 PF17091 Inovirus G7P protein XCAW_01583 PF00106 short chain dehydrogenase XCAW_01594 PF01329 Pterin 4 alpha carbinolamine dehydratase XCAW_01595 PF01106 NifU-like domain XCAW_01597 PF02535 ZIP Zinc transporter XCAW_01598 PF11737 Protein of unknown function (DUF3300) XCAW_01599 PF01479 S4 domain XCAW_01599 PF00849 RNA pseudouridylate synthase XCAW_01601 PF12111 Polyribonucleotide phosphorylase C terminal XCAW_01601 PF10150 Ribonuclease E/G family XCAW_01601 PF00575 S1 RNA binding domain XCAW_01602 PF00072 Response regulator receiver domain XCAW_01602 PF00196 Bacterial regulatory proteins, luxR family XCAW_01605 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XCAW_01607 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain XCAW_01607 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain XCAW_01607 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain XCAW_01609 PF00589 Phage integrase family XCAW_01610 PF01527 Transposase XCAW_01611 PF13333 Integrase core domain XCAW_01611 PF00665 Integrase core domain XCAW_01611 PF13276 HTH-like domain XCAW_01612 PF01527 Transposase XCAW_01614 PF00501 AMP-binding enzyme XCAW_01614 PF00975 Thioesterase domain XCAW_01614 PF13193 AMP-binding enzyme C-terminal domain XCAW_01614 PF00550 Phosphopantetheine attachment site XCAW_01614 PF00668 Condensation domain XCAW_01615 PF00550 Phosphopantetheine attachment site XCAW_01615 PF00668 Condensation domain XCAW_01615 PF13193 AMP-binding enzyme C-terminal domain XCAW_01615 PF00501 AMP-binding enzyme XCAW_01620 PF05598 Transposase domain (DUF772) XCAW_01620 PF01609 Transposase DDE domain XCAW_01624 PF01609 Transposase DDE domain XCAW_01624 PF05598 Transposase domain (DUF772) XCAW_01625 PF02796 Helix-turn-helix domain of resolvase XCAW_01625 PF00665 Integrase core domain XCAW_01626 PF01695 IstB-like ATP binding protein XCAW_01632 PF12137 RNA polymerase recycling family C-terminal XCAW_01632 PF00271 Helicase conserved C-terminal domain XCAW_01632 PF00176 SNF2 family N-terminal domain XCAW_01632 PF18339 RapA N-terminal Tudor like domain 1 XCAW_01632 PF18337 RapA N-terminal Tudor like domain XCAW_01633 PF01695 IstB-like ATP binding protein XCAW_01634 PF02796 Helix-turn-helix domain of resolvase XCAW_01634 PF00665 Integrase core domain XCAW_01635 PF00176 SNF2 family N-terminal domain XCAW_01635 PF18339 RapA N-terminal Tudor like domain 1 XCAW_01635 PF00271 Helicase conserved C-terminal domain XCAW_01635 PF12137 RNA polymerase recycling family C-terminal XCAW_01635 PF18337 RapA N-terminal Tudor like domain XCAW_01636 PF00145 C-5 cytosine-specific DNA methylase XCAW_01640 PF01695 IstB-like ATP binding protein XCAW_01641 PF00665 Integrase core domain XCAW_01641 PF02796 Helix-turn-helix domain of resolvase XCAW_01644 PF13614 AAA domain XCAW_01651 PF00436 Single-strand binding protein family XCAW_01652 PF01751 Toprim domain XCAW_01652 PF01131 DNA topoisomerase XCAW_01653 PF00145 C-5 cytosine-specific DNA methylase XCAW_01656 PF02021 Uncharacterised protein family UPF0102 XCAW_01663 PF00665 Integrase core domain XCAW_01663 PF13936 Helix-turn-helix domain XCAW_01690 PF04002 RadC-like JAB domain XCAW_01702 PF13340 Putative transposase of IS4/5 family (DUF4096) XCAW_01710 PF04610 TrbL/VirB6 plasmid conjugal transfer protein XCAW_01716 PF01609 Transposase DDE domain XCAW_01717 PF13340 Putative transposase of IS4/5 family (DUF4096) XCAW_01719 PF05598 Transposase domain (DUF772) XCAW_01720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCAW_01720 PF03466 LysR substrate binding domain XCAW_01721 PF01381 Helix-turn-helix XCAW_01724 PF01695 IstB-like ATP binding protein XCAW_01725 PF00665 Integrase core domain XCAW_01725 PF02796 Helix-turn-helix domain of resolvase XCAW_01726 PF00589 Phage integrase family XCAW_01726 PF13356 Arm DNA-binding domain XCAW_01728 PF01066 CDP-alcohol phosphatidyltransferase XCAW_01729 PF02151 UvrB/uvrC motif XCAW_01729 PF08459 UvrC Helix-hairpin-helix N-terminal XCAW_01729 PF01541 GIY-YIG catalytic domain XCAW_01731 PF01451 Low molecular weight phosphotyrosine protein phosphatase XCAW_01732 PF02348 Cytidylyltransferase XCAW_01733 PF02606 Tetraacyldisaccharide-1-P 4'-kinase XCAW_01734 PF00005 ABC transporter XCAW_01734 PF00664 ABC transporter transmembrane region XCAW_01736 PF01618 MotA/TolQ/ExbB proton channel family XCAW_01737 PF03772 Competence protein XCAW_01737 PF00753 Metallo-beta-lactamase superfamily XCAW_01739 PF00005 ABC transporter XCAW_01740 PF02687 FtsX-like permease family XCAW_01740 PF12704 MacB-like periplasmic core domain XCAW_01742 PF03937 Flavinator of succinate dehydrogenase XCAW_01743 PF13085 2Fe-2S iron-sulfur cluster binding domain XCAW_01745 PF02910 Fumarate reductase flavoprotein C-term XCAW_01745 PF00890 FAD binding domain XCAW_01746 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit XCAW_01747 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit XCAW_01750 PF17912 MalK OB fold domain XCAW_01750 PF00005 ABC transporter XCAW_01751 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain XCAW_01751 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain XCAW_01752 PF02685 Glucokinase XCAW_01753 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase XCAW_01754 PF00920 Dehydratase family XCAW_01755 PF01081 KDPG and KHG aldolase XCAW_01756 PF00873 AcrB/AcrD/AcrF family XCAW_01757 PF00873 AcrB/AcrD/AcrF family XCAW_01758 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XCAW_01760 PF00034 Cytochrome c XCAW_01769 PF00072 Response regulator receiver domain XCAW_01769 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_01769 PF00512 His Kinase A (phospho-acceptor) domain XCAW_01769 PF09308 LuxQ, periplasmic XCAW_01770 PF17674 HHH domain XCAW_01770 PF09371 Tex-like protein N-terminal domain XCAW_01770 PF00575 S1 RNA binding domain XCAW_01770 PF16921 Tex protein YqgF-like domain XCAW_01772 PF00355 Rieske [2Fe-2S] domain XCAW_01772 PF01266 FAD dependent oxidoreductase XCAW_01775 PF00561 alpha/beta hydrolase fold XCAW_01777 PF01066 CDP-alcohol phosphatidyltransferase XCAW_01782 PF03618 Kinase/pyrophosphorylase XCAW_01783 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain XCAW_01783 PF02896 PEP-utilising enzyme, TIM barrel domain XCAW_01783 PF00391 PEP-utilising enzyme, mobile domain XCAW_01784 PF05552 Conserved TM helix XCAW_01784 PF00924 Mechanosensitive ion channel XCAW_01785 PF00929 Exonuclease XCAW_01786 PF14437 MafB19-like deaminase XCAW_01787 PF01325 Iron dependent repressor, N-terminal DNA binding domain XCAW_01787 PF02742 Iron dependent repressor, metal binding and dimerisation domain XCAW_01788 PF01566 Natural resistance-associated macrophage protein XCAW_01789 PF00561 alpha/beta hydrolase fold XCAW_01791 PF12804 MobA-like NTP transferase domain XCAW_01792 PF03454 MoeA C-terminal region (domain IV) XCAW_01792 PF00994 Probable molybdopterin binding domain XCAW_01792 PF03453 MoeA N-terminal region (domain I and II) XCAW_01794 PF03372 Endonuclease/Exonuclease/phosphatase family XCAW_01796 PF00107 Zinc-binding dehydrogenase XCAW_01796 PF08240 Alcohol dehydrogenase GroES-like domain XCAW_01796 PF13823 Alcohol dehydrogenase GroES-associated XCAW_01801 PF00899 ThiF family XCAW_01802 PF03453 MoeA N-terminal region (domain I and II) XCAW_01802 PF03454 MoeA C-terminal region (domain IV) XCAW_01802 PF00994 Probable molybdopterin binding domain XCAW_01803 PF01926 50S ribosome-binding GTPase XCAW_01803 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal XCAW_01804 PF01011 PQQ enzyme repeat XCAW_01804 PF13360 PQQ-like domain XCAW_01806 PF13464 Domain of unknown function (DUF4115) XCAW_01808 PF04055 Radical SAM superfamily XCAW_01809 PF00334 Nucleoside diphosphate kinase XCAW_01811 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain XCAW_01811 PF00378 Enoyl-CoA hydratase/isomerase XCAW_01811 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XCAW_01812 PF02803 Thiolase, C-terminal domain XCAW_01812 PF00108 Thiolase, N-terminal domain XCAW_01813 PF02537 CrcB-like protein, Camphor Resistance (CrcB) XCAW_01814 PF16193 AAA C-terminal domain XCAW_01814 PF00004 ATPase family associated with various cellular activities (AAA) XCAW_01814 PF12002 MgsA AAA+ ATPase C terminal XCAW_01816 PF03548 Outer membrane lipoprotein carrier protein LolA XCAW_01819 PF01580 FtsK/SpoIIIE family XCAW_01819 PF09397 Ftsk gamma domain XCAW_01819 PF13491 4TM region of DNA translocase FtsK/SpoIIIE XCAW_01819 PF17854 FtsK alpha domain XCAW_01821 PF07992 Pyridine nucleotide-disulphide oxidoreductase XCAW_01823 PF03588 Leucyl/phenylalanyl-tRNA protein transferase XCAW_01824 PF01176 Translation initiation factor 1A / IF-1 XCAW_01825 PF02861 Clp amino terminal domain, pathogenicity island component XCAW_01825 PF17871 AAA lid domain XCAW_01825 PF07724 AAA domain (Cdc48 subfamily) XCAW_01825 PF00004 ATPase family associated with various cellular activities (AAA) XCAW_01825 PF10431 C-terminal, D2-small domain, of ClpB protein XCAW_01826 PF02617 ATP-dependent Clp protease adaptor protein ClpS XCAW_01827 PF00293 NUDIX domain XCAW_01829 PF04356 Protein of unknown function (DUF489) XCAW_01830 PF00672 HAMP domain XCAW_01830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCAW_01830 PF12729 Four helix bundle sensory module for signal transduction XCAW_01833 PF00990 Diguanylate cyclase, GGDEF domain XCAW_01833 PF00563 EAL domain XCAW_01833 PF03707 Bacterial signalling protein N terminal repeat XCAW_01834 PF07730 Histidine kinase XCAW_01834 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_01835 PF00563 EAL domain XCAW_01835 PF00990 Diguanylate cyclase, GGDEF domain XCAW_01835 PF03707 Bacterial signalling protein N terminal repeat XCAW_01836 PF00989 PAS fold XCAW_01836 PF13426 PAS domain XCAW_01836 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_01836 PF00512 His Kinase A (phospho-acceptor) domain XCAW_01836 PF13188 PAS domain XCAW_01840 PF00072 Response regulator receiver domain XCAW_01840 PF01584 CheW-like domain XCAW_01842 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XCAW_01842 PF00460 Flagella basal body rod protein XCAW_01843 PF03963 Flagellar hook capping protein - N-terminal region XCAW_01844 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XCAW_01844 PF00460 Flagella basal body rod protein XCAW_01844 PF07559 Flagellar basal body protein FlaE XCAW_01845 PF00460 Flagella basal body rod protein XCAW_01845 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XCAW_01846 PF00460 Flagella basal body rod protein XCAW_01846 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XCAW_01847 PF02107 Flagellar L-ring protein XCAW_01848 PF02119 Flagellar P-ring protein XCAW_01849 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase XCAW_01849 PF10135 Rod binding protein XCAW_01850 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XCAW_01850 PF07196 Flagellin hook IN motif XCAW_01851 PF00669 Bacterial flagellin N-terminal helical region XCAW_01851 PF00700 Bacterial flagellin C-terminal helical region XCAW_01852 PF00669 Bacterial flagellin N-terminal helical region XCAW_01852 PF00700 Bacterial flagellin C-terminal helical region XCAW_01853 PF07195 Flagellar hook-associated protein 2 C-terminus XCAW_01853 PF07196 Flagellin hook IN motif XCAW_01853 PF02465 Flagellar hook-associated protein 2 N-terminus XCAW_01855 PF02561 Flagellar protein FliS XCAW_01858 PF00196 Bacterial regulatory proteins, luxR family XCAW_01858 PF00072 Response regulator receiver domain XCAW_01859 PF04552 Sigma-54, DNA binding domain XCAW_01859 PF04963 Sigma-54 factor, core binding domain XCAW_01859 PF00309 Sigma-54 factor, Activator interacting domain (AID) XCAW_01860 PF00072 Response regulator receiver domain XCAW_01860 PF01339 CheB methylesterase XCAW_01861 PF02954 Bacterial regulatory protein, Fis family XCAW_01861 PF00072 Response regulator receiver domain XCAW_01861 PF00158 Sigma-54 interaction domain XCAW_01862 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family XCAW_01864 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XCAW_01864 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XCAW_01872 PF00534 Glycosyl transferases group 1 XCAW_01872 PF00535 Glycosyl transferase family 2 XCAW_01873 PF02049 Flagellar hook-basal body complex protein FliE XCAW_01875 PF08345 Flagellar M-ring protein C-terminal XCAW_01875 PF01514 Secretory protein of YscJ/FliF family XCAW_01876 PF14841 FliG middle domain XCAW_01876 PF01706 FliG C-terminal domain XCAW_01876 PF14842 FliG N-terminal domain XCAW_01878 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XCAW_01878 PF18269 T3SS EscN ATPase C-terminal domain XCAW_01882 PF02154 Flagellar motor switch protein FliM XCAW_01882 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term XCAW_01883 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term XCAW_01884 PF04347 Flagellar biosynthesis protein, FliO XCAW_01885 PF00813 FliP family XCAW_01887 PF01313 Bacterial export proteins, family 3 XCAW_01888 PF01311 Bacterial export proteins, family 1 XCAW_01889 PF00563 EAL domain XCAW_01889 PF13188 PAS domain XCAW_01889 PF03707 Bacterial signalling protein N terminal repeat XCAW_01889 PF00990 Diguanylate cyclase, GGDEF domain XCAW_01890 PF13188 PAS domain XCAW_01890 PF03707 Bacterial signalling protein N terminal repeat XCAW_01890 PF00990 Diguanylate cyclase, GGDEF domain XCAW_01890 PF00563 EAL domain XCAW_01891 PF00990 Diguanylate cyclase, GGDEF domain XCAW_01891 PF03707 Bacterial signalling protein N terminal repeat XCAW_01891 PF00563 EAL domain XCAW_01892 PF01312 FlhB HrpN YscU SpaS Family XCAW_01893 PF00771 FHIPEP family XCAW_01895 PF00448 SRP54-type protein, GTPase domain XCAW_01896 PF10609 NUBPL iron-transfer P-loop NTPase XCAW_01897 PF04545 Sigma-70, region 4 XCAW_01897 PF04539 Sigma-70 region 3 XCAW_01897 PF04542 Sigma-70 region 2 XCAW_01898 PF00072 Response regulator receiver domain XCAW_01899 PF04344 Chemotaxis phosphatase, CheZ XCAW_01900 PF01627 Hpt domain XCAW_01900 PF07194 P2 response regulator binding domain XCAW_01900 PF01584 CheW-like domain XCAW_01900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_01900 PF02895 Signal transducing histidine kinase, homodimeric domain XCAW_01903 PF13186 Iron-sulfur cluster-binding domain XCAW_01903 PF04055 Radical SAM superfamily XCAW_01910 PF01527 Transposase XCAW_01911 PF13333 Integrase core domain XCAW_01911 PF00665 Integrase core domain XCAW_01911 PF13276 HTH-like domain XCAW_01912 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) XCAW_01916 PF02796 Helix-turn-helix domain of resolvase XCAW_01916 PF00665 Integrase core domain XCAW_01917 PF01695 IstB-like ATP binding protein XCAW_01923 PF00580 UvrD/REP helicase N-terminal domain XCAW_01923 PF12462 DNA helicase IV / RNA helicase N terminal XCAW_01923 PF13361 UvrD-like helicase C-terminal domain XCAW_01939 PF03466 LysR substrate binding domain XCAW_01939 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCAW_01940 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase XCAW_01940 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase XCAW_01941 PF03401 Tripartite tricarboxylate transporter family receptor XCAW_01944 PF04002 RadC-like JAB domain XCAW_01951 PF00589 Phage integrase family XCAW_01951 PF13356 Arm DNA-binding domain XCAW_01952 PF00958 GMP synthase C terminal domain XCAW_01952 PF00117 Glutamine amidotransferase class-I XCAW_01952 PF02540 NAD synthase XCAW_01953 PF00478 IMP dehydrogenase / GMP reductase domain XCAW_01953 PF00571 CBS domain XCAW_01954 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain XCAW_01954 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain XCAW_01956 PF00999 Sodium/hydrogen exchanger family XCAW_01956 PF02254 TrkA-N domain XCAW_01957 PF00483 Nucleotidyl transferase XCAW_01958 PF02719 Polysaccharide biosynthesis protein XCAW_01959 PF00953 Glycosyl transferase family 4 XCAW_01960 PF18073 Rubredoxin metal binding domain XCAW_01962 PF00216 Bacterial DNA-binding protein XCAW_01963 PF00575 S1 RNA binding domain XCAW_01964 PF02224 Cytidylate kinase XCAW_01965 PF00444 Ribosomal protein L36 XCAW_01967 PF04371 Porphyromonas-type peptidyl-arginine deiminase XCAW_01968 PF00795 Carbon-nitrogen hydrolase XCAW_01973 PF00528 Binding-protein-dependent transport system inner membrane component XCAW_01974 PF00528 Binding-protein-dependent transport system inner membrane component XCAW_01978 PF00356 Bacterial regulatory proteins, lacI family XCAW_01980 PF03795 YCII-related domain XCAW_01981 PF02616 Segregation and condensation protein ScpA XCAW_01982 PF04079 Segregation and condensation complex subunit ScpB XCAW_01983 PF01479 S4 domain XCAW_01983 PF00849 RNA pseudouridylate synthase XCAW_01986 PF00795 Carbon-nitrogen hydrolase XCAW_01987 PF00155 Aminotransferase class I and II XCAW_01988 PF00005 ABC transporter XCAW_01989 PF03379 CcmB protein XCAW_01990 PF01578 Cytochrome C assembly protein XCAW_01992 PF03100 CcmE XCAW_01993 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal XCAW_01993 PF01578 Cytochrome C assembly protein XCAW_01994 PF08534 Redoxin XCAW_01995 PF03918 Cytochrome C biogenesis protein XCAW_01997 PF00561 alpha/beta hydrolase fold XCAW_01998 PF00313 'Cold-shock' DNA-binding domain XCAW_01999 PF00664 ABC transporter transmembrane region XCAW_01999 PF00005 ABC transporter XCAW_02000 PF00664 ABC transporter transmembrane region XCAW_02000 PF00005 ABC transporter XCAW_02001 PF01654 Cytochrome bd terminal oxidase subunit I XCAW_02002 PF02322 Cytochrome bd terminal oxidase subunit II XCAW_02006 PF02129 X-Pro dipeptidyl-peptidase (S15 family) XCAW_02006 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain XCAW_02007 PF00171 Aldehyde dehydrogenase family XCAW_02008 PF00696 Amino acid kinase family XCAW_02008 PF01472 PUA domain XCAW_02010 PF00206 Lyase XCAW_02011 PF01118 Semialdehyde dehydrogenase, NAD binding domain XCAW_02013 PF00696 Amino acid kinase family XCAW_02013 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase XCAW_02016 PF00764 Arginosuccinate synthase XCAW_02017 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain XCAW_02017 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain XCAW_02020 PF09190 DALR domain XCAW_02020 PF01406 tRNA synthetases class I (C) catalytic domain XCAW_02021 PF02657 Fe-S metabolism associated domain XCAW_02023 PF01258 Prokaryotic dksA/traR C4-type zinc finger XCAW_02024 PF01809 Putative membrane protein insertion efficiency factor XCAW_02025 PF01979 Amidohydrolase family XCAW_02026 PF01551 Peptidase family M23 XCAW_02026 PF08460 Bacterial SH3 domain XCAW_02030 PF06751 Ethanolamine ammonia lyase large subunit (EutB) XCAW_02031 PF05985 Ethanolamine ammonia-lyase light chain (EutC) XCAW_02033 PF00753 Metallo-beta-lactamase superfamily XCAW_02037 PF01527 Transposase XCAW_02039 PF00295 Glycosyl hydrolases family 28 XCAW_02041 PF13419 Haloacid dehalogenase-like hydrolase XCAW_02043 PF01979 Amidohydrolase family XCAW_02045 PF08207 Elongation factor P (EF-P) KOW-like domain XCAW_02045 PF09285 Elongation factor P, C-terminal XCAW_02045 PF01132 Elongation factor P (EF-P) OB domain XCAW_02046 PF04055 Radical SAM superfamily XCAW_02047 PF00563 EAL domain XCAW_02047 PF00990 Diguanylate cyclase, GGDEF domain XCAW_02047 PF03707 Bacterial signalling protein N terminal repeat XCAW_02047 PF13188 PAS domain XCAW_02049 PF00588 SpoU rRNA Methylase family XCAW_02050 PF00459 Inositol monophosphatase family XCAW_02051 PF02777 Iron/manganese superoxide dismutases, C-terminal domain XCAW_02051 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain XCAW_02052 PF00545 ribonuclease XCAW_02055 PF03880 DbpA RNA binding domain XCAW_02055 PF00271 Helicase conserved C-terminal domain XCAW_02055 PF00270 DEAD/DEAH box helicase XCAW_02056 PF00156 Phosphoribosyl transferase domain XCAW_02057 PF02696 Uncharacterized ACR, YdiU/UPF0061 family XCAW_02058 PF00135 Carboxylesterase family XCAW_02059 PF02798 Glutathione S-transferase, N-terminal domain XCAW_02059 PF14497 Glutathione S-transferase, C-terminal domain XCAW_02060 PF00313 'Cold-shock' DNA-binding domain XCAW_02061 PF07152 YaeQ protein XCAW_02063 PF00563 EAL domain XCAW_02063 PF00990 Diguanylate cyclase, GGDEF domain XCAW_02063 PF00072 Response regulator receiver domain XCAW_02064 PF01435 Peptidase family M48 XCAW_02065 PF00749 tRNA synthetases class I (E and Q), catalytic domain XCAW_02066 PF00106 short chain dehydrogenase XCAW_02067 PF07879 PHB/PHA accumulation regulator DNA-binding domain XCAW_02067 PF05233 PHB accumulation regulatory domain XCAW_02070 PF08676 MutL C terminal dimerisation domain XCAW_02070 PF01119 DNA mismatch repair protein, C-terminal domain XCAW_02072 PF01520 N-acetylmuramoyl-L-alanine amidase XCAW_02072 PF11741 AMIN domain XCAW_02073 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE XCAW_02074 PF03853 YjeF-related protein N-terminus XCAW_02074 PF01256 Carbohydrate kinase XCAW_02075 PF08331 Domain of unknown function (DUF1730) XCAW_02076 PF02601 Exonuclease VII, large subunit XCAW_02076 PF13742 OB-fold nucleic acid binding domain XCAW_02078 PF03781 Sulfatase-modifying factor enzyme 1 XCAW_02079 PF01612 3'-5' exonuclease XCAW_02079 PF00570 HRDC domain XCAW_02080 PF04679 ATP dependent DNA ligase C terminal region XCAW_02080 PF13298 DNA polymerase Ligase (LigD) XCAW_02080 PF01068 ATP dependent DNA ligase domain XCAW_02085 PF00589 Phage integrase family XCAW_02088 PF03432 Relaxase/Mobilisation nuclease domain XCAW_02090 PF05598 Transposase domain (DUF772) XCAW_02092 PF01527 Transposase XCAW_02096 PF18327 Proline utilization A proline dehydrogenase N-terminal domain XCAW_02096 PF01619 Proline dehydrogenase XCAW_02096 PF14850 DNA-binding domain of Proline dehydrogenase XCAW_02096 PF00171 Aldehyde dehydrogenase family XCAW_02098 PF01527 Transposase XCAW_02099 PF13276 HTH-like domain XCAW_02099 PF00665 Integrase core domain XCAW_02099 PF13333 Integrase core domain XCAW_02101 PF02796 Helix-turn-helix domain of resolvase XCAW_02101 PF00239 Resolvase, N terminal domain XCAW_02105 PF02384 N-6 DNA Methylase XCAW_02106 PF09572 XamI restriction endonuclease XCAW_02119 PF01584 CheW-like domain XCAW_02120 PF12729 Four helix bundle sensory module for signal transduction XCAW_02120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCAW_02120 PF00672 HAMP domain XCAW_02121 PF02245 Methylpurine-DNA glycosylase (MPG) XCAW_02122 PF08494 DEAD/H associated XCAW_02122 PF00271 Helicase conserved C-terminal domain XCAW_02122 PF00270 DEAD/DEAH box helicase XCAW_02125 PF04386 Stringent starvation protein B XCAW_02126 PF00043 Glutathione S-transferase, C-terminal domain XCAW_02126 PF02798 Glutathione S-transferase, N-terminal domain XCAW_02127 PF02167 Cytochrome C1 family XCAW_02128 PF00032 Cytochrome b(C-terminal)/b6/petD XCAW_02128 PF00033 Cytochrome b/b6/petB XCAW_02129 PF00355 Rieske [2Fe-2S] domain XCAW_02129 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal XCAW_02131 PF01464 Transglycosylase SLT domain XCAW_02134 PF00919 Uncharacterized protein family UPF0004 XCAW_02134 PF01938 TRAM domain XCAW_02134 PF04055 Radical SAM superfamily XCAW_02135 PF02562 PhoH-like protein XCAW_02137 PF02130 Uncharacterized protein family UPF0054 XCAW_02139 PF00571 CBS domain XCAW_02139 PF03471 Transporter associated domain XCAW_02142 PF00171 Aldehyde dehydrogenase family XCAW_02143 PF00528 Binding-protein-dependent transport system inner membrane component XCAW_02144 PF00528 Binding-protein-dependent transport system inner membrane component XCAW_02145 PF08402 TOBE domain XCAW_02145 PF00005 ABC transporter XCAW_02146 PF02321 Outer membrane efflux protein XCAW_02147 PF07690 Major Facilitator Superfamily XCAW_02148 PF13533 Biotin-lipoyl like XCAW_02149 PF13416 Bacterial extracellular solute-binding protein XCAW_02150 PF00202 Aminotransferase class-III XCAW_02151 PF00120 Glutamine synthetase, catalytic domain XCAW_02152 PF07722 Peptidase C26 XCAW_02153 PF00120 Glutamine synthetase, catalytic domain XCAW_02154 PF01266 FAD dependent oxidoreductase XCAW_02155 PF00990 Diguanylate cyclase, GGDEF domain XCAW_02155 PF00072 Response regulator receiver domain XCAW_02156 PF01814 Hemerythrin HHE cation binding domain XCAW_02157 PF00083 Sugar (and other) transporter XCAW_02157 PF07690 Major Facilitator Superfamily XCAW_02159 PF00384 Molybdopterin oxidoreductase XCAW_02160 PF02634 FdhD/NarQ family XCAW_02161 PF07690 Major Facilitator Superfamily XCAW_02163 PF00202 Aminotransferase class-III XCAW_02165 PF04286 Protein of unknown function (DUF445) XCAW_02166 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_02166 PF00672 HAMP domain XCAW_02166 PF00512 His Kinase A (phospho-acceptor) domain XCAW_02166 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) XCAW_02166 PF00072 Response regulator receiver domain XCAW_02166 PF01627 Hpt domain XCAW_02167 PF00072 Response regulator receiver domain XCAW_02168 PF07690 Major Facilitator Superfamily XCAW_02171 PF05088 Bacterial NAD-glutamate dehydrogenase XCAW_02173 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XCAW_02173 PF00529 HlyD membrane-fusion protein of T1SS XCAW_02174 PF00873 AcrB/AcrD/AcrF family XCAW_02175 PF00356 Bacterial regulatory proteins, lacI family XCAW_02176 PF05524 PEP-utilising enzyme, N-terminal XCAW_02176 PF00381 PTS HPr component phosphorylation site XCAW_02176 PF00391 PEP-utilising enzyme, mobile domain XCAW_02176 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 XCAW_02176 PF02896 PEP-utilising enzyme, TIM barrel domain XCAW_02177 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 XCAW_02177 PF05524 PEP-utilising enzyme, N-terminal XCAW_02177 PF00391 PEP-utilising enzyme, mobile domain XCAW_02177 PF00381 PTS HPr component phosphorylation site XCAW_02177 PF02896 PEP-utilising enzyme, TIM barrel domain XCAW_02178 PF00294 pfkB family carbohydrate kinase XCAW_02179 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit XCAW_02187 PF02355 Protein export membrane protein XCAW_02187 PF07549 SecD/SecF GG Motif XCAW_02188 PF02355 Protein export membrane protein XCAW_02188 PF07549 SecD/SecF GG Motif XCAW_02188 PF13721 SecD export protein N-terminal TM region XCAW_02189 PF02699 Preprotein translocase subunit XCAW_02190 PF01702 Queuine tRNA-ribosyltransferase XCAW_02191 PF02547 Queuosine biosynthesis protein XCAW_02199 PF02927 Cellulase N-terminal ig-like domain XCAW_02199 PF00759 Glycosyl hydrolase family 9 XCAW_02201 PF00037 4Fe-4S binding domain XCAW_02203 PF01467 Cytidylyltransferase-like XCAW_02205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_02205 PF00183 Hsp90 protein XCAW_02209 PF07715 TonB-dependent Receptor Plug Domain XCAW_02209 PF00593 TonB dependent receptor XCAW_02211 PF04616 Glycosyl hydrolases family 43 XCAW_02212 PF07532 Bacterial Ig-like domain (group 4) XCAW_02213 PF07715 TonB-dependent Receptor Plug Domain XCAW_02213 PF00593 TonB dependent receptor XCAW_02215 PF09286 Pro-kumamolisin, activation domain XCAW_02215 PF00082 Subtilase family XCAW_02221 PF13520 Amino acid permease XCAW_02224 PF01321 Creatinase/Prolidase N-terminal domain XCAW_02224 PF00557 Metallopeptidase family M24 XCAW_02225 PF00171 Aldehyde dehydrogenase family XCAW_02226 PF00701 Dihydrodipicolinate synthetase family XCAW_02227 PF04324 BFD-like [2Fe-2S] binding domain XCAW_02227 PF07992 Pyridine nucleotide-disulphide oxidoreductase XCAW_02229 PF01266 FAD dependent oxidoreductase XCAW_02230 PF05544 Proline racemase XCAW_02232 PF02881 SRP54-type protein, helical bundle domain XCAW_02232 PF00448 SRP54-type protein, GTPase domain XCAW_02233 PF10576 Iron-sulfur binding domain of endonuclease III XCAW_02233 PF00730 HhH-GPD superfamily base excision DNA repair protein XCAW_02233 PF00633 Helix-hairpin-helix motif XCAW_02233 PF14815 NUDIX domain XCAW_02234 PF04362 Bacterial Fe(2+) trafficking XCAW_02235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_02235 PF00072 Response regulator receiver domain XCAW_02235 PF13426 PAS domain XCAW_02241 PF08212 Lipocalin-like domain XCAW_02244 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XCAW_02244 PF02770 Acyl-CoA dehydrogenase, middle domain XCAW_02244 PF12806 Acetyl-CoA dehydrogenase C-terminal like XCAW_02244 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XCAW_02246 PF02780 Transketolase, C-terminal domain XCAW_02246 PF13292 1-deoxy-D-xylulose-5-phosphate synthase XCAW_02246 PF02779 Transketolase, pyrimidine binding domain XCAW_02250 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family XCAW_02251 PF00753 Metallo-beta-lactamase superfamily XCAW_02251 PF16123 Hydroxyacylglutathione hydrolase C-terminus XCAW_02252 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XCAW_02252 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XCAW_02255 PF03808 Glycosyl transferase WecB/TagA/CpsF family XCAW_02258 PF14667 Polysaccharide biosynthesis C-terminal domain XCAW_02260 PF13439 Glycosyltransferase Family 4 XCAW_02260 PF00534 Glycosyl transferases group 1 XCAW_02264 PF02397 Bacterial sugar transferase XCAW_02268 PF13411 MerR HTH family regulatory protein XCAW_02269 PF00216 Bacterial DNA-binding protein XCAW_02270 PF03483 B3/4 domain XCAW_02270 PF03147 Ferredoxin-fold anticodon binding domain XCAW_02270 PF01588 Putative tRNA binding domain XCAW_02270 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain XCAW_02270 PF03484 tRNA synthetase B5 domain XCAW_02271 PF01409 tRNA synthetases class II core domain (F) XCAW_02271 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain XCAW_02272 PF00453 Ribosomal protein L20 XCAW_02273 PF01632 Ribosomal protein L35 XCAW_02274 PF00707 Translation initiation factor IF-3, C-terminal domain XCAW_02274 PF05198 Translation initiation factor IF-3, N-terminal domain XCAW_02275 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XCAW_02275 PF02824 TGS domain XCAW_02275 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain XCAW_02275 PF03129 Anticodon binding domain XCAW_02276 PF00356 Bacterial regulatory proteins, lacI family XCAW_02277 PF00686 Starch binding domain XCAW_02277 PF00128 Alpha amylase, catalytic domain XCAW_02278 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 XCAW_02280 PF14508 Glycosyl-hydrolase 97 N-terminal XCAW_02280 PF10566 Glycoside hydrolase 97 XCAW_02280 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation XCAW_02284 PF00128 Alpha amylase, catalytic domain XCAW_02285 PF01527 Transposase XCAW_02289 PF00083 Sugar (and other) transporter XCAW_02291 PF00370 FGGY family of carbohydrate kinases, N-terminal domain XCAW_02291 PF02782 FGGY family of carbohydrate kinases, C-terminal domain XCAW_02293 PF01055 Glycosyl hydrolases family 31 XCAW_02293 PF17137 Domain of unknown function (DUF5110) XCAW_02293 PF16338 Domain of unknown function (DUF4968) XCAW_02296 PF03442 Carbohydrate binding domain X2 XCAW_02296 PF00942 Cellulose binding domain XCAW_02299 PF03466 LysR substrate binding domain XCAW_02299 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCAW_02302 PF01081 KDPG and KHG aldolase XCAW_02303 PF13378 Enolase C-terminal domain-like XCAW_02303 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain XCAW_02304 PF08450 SMP-30/Gluconolactonase/LRE-like region XCAW_02305 PF05035 2-keto-3-deoxy-galactonokinase XCAW_02306 PF11953 Domain of unknown function (DUF3470) XCAW_02306 PF00037 4Fe-4S binding domain XCAW_02308 PF00701 Dihydrodipicolinate synthetase family XCAW_02311 PF00578 AhpC/TSA family XCAW_02312 PF13638 PIN domain XCAW_02312 PF02562 PhoH-like protein XCAW_02315 PF02581 Thiamine monophosphate synthase XCAW_02315 PF08543 Phosphomethylpyrimidine kinase XCAW_02320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCAW_02320 PF03466 LysR substrate binding domain XCAW_02321 PF17954 Quercetinase C-terminal cupin domain XCAW_02321 PF02678 Pirin XCAW_02322 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCAW_02322 PF13426 PAS domain XCAW_02322 PF08447 PAS fold XCAW_02325 PF02599 Global regulator protein family XCAW_02326 PF02272 DHHA1 domain XCAW_02326 PF01411 tRNA synthetases class II (A) XCAW_02326 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain XCAW_02327 PF02631 RecX family XCAW_02328 PF00154 recA bacterial DNA recombination protein XCAW_02329 PF00717 Peptidase S24-like XCAW_02329 PF01726 LexA DNA binding domain XCAW_02330 PF03109 ABC1 family XCAW_02332 PF02464 Competence-damaged protein XCAW_02333 PF01926 50S ribosome-binding GTPase XCAW_02333 PF16360 GTP-binding GTPase Middle Region XCAW_02333 PF13167 GTP-binding GTPase N-terminal XCAW_02334 PF17209 Hfq protein XCAW_02336 PF00809 Pterin binding enzyme XCAW_02337 PF01434 Peptidase family M41 XCAW_02337 PF06480 FtsH Extracellular XCAW_02337 PF17862 AAA+ lid domain XCAW_02337 PF00004 ATPase family associated with various cellular activities (AAA) XCAW_02338 PF01728 FtsJ-like methyltransferase XCAW_02339 PF01985 CRS1 / YhbY (CRM) domain XCAW_02340 PF04430 Protein of unknown function (DUF498/DUF598) XCAW_02342 PF01551 Peptidase family M23 XCAW_02342 PF01476 LysM domain XCAW_02343 PF09335 SNARE associated Golgi protein XCAW_02345 PF01975 Survival protein SurE XCAW_02346 PF01713 Smr domain XCAW_02347 PF01142 tRNA pseudouridine synthase D (TruD) XCAW_02348 PF02542 YgbB family XCAW_02349 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase XCAW_02350 PF04977 Septum formation initiator XCAW_02351 PF03952 Enolase, N-terminal domain XCAW_02351 PF00113 Enolase, C-terminal TIM barrel domain XCAW_02353 PF00793 DAHP synthetase I family XCAW_02354 PF06418 CTP synthase N-terminus XCAW_02354 PF00117 Glutamine amidotransferase class-I XCAW_02356 PF01751 Toprim domain XCAW_02356 PF00986 DNA gyrase B subunit, carboxyl terminus XCAW_02356 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_02356 PF00204 DNA gyrase B XCAW_02360 PF01384 Phosphate transporter family XCAW_02363 PF03471 Transporter associated domain XCAW_02363 PF00571 CBS domain XCAW_02363 PF01595 Cyclin M transmembrane N-terminal domain XCAW_02366 PF00296 Luciferase-like monooxygenase XCAW_02367 PF07690 Major Facilitator Superfamily XCAW_02368 PF00664 ABC transporter transmembrane region XCAW_02368 PF00005 ABC transporter XCAW_02369 PF00005 ABC transporter XCAW_02372 PF00534 Glycosyl transferases group 1 XCAW_02372 PF13579 Glycosyl transferase 4-like domain XCAW_02376 PF08241 Methyltransferase domain XCAW_02379 PF00535 Glycosyl transferase family 2 XCAW_02380 PF01943 Polysaccharide biosynthesis protein XCAW_02381 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family XCAW_02385 PF05523 WxcM-like, C-terminal XCAW_02388 PF00034 Cytochrome c XCAW_02390 PF04542 Sigma-70 region 2 XCAW_02390 PF08281 Sigma-70, region 4 XCAW_02392 PF00082 Subtilase family XCAW_02393 PF01578 Cytochrome C assembly protein XCAW_02395 PF03100 CcmE XCAW_02396 PF01578 Cytochrome C assembly protein XCAW_02396 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal XCAW_02397 PF08534 Redoxin XCAW_02398 PF03918 Cytochrome C biogenesis protein XCAW_02400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_02400 PF13426 PAS domain XCAW_02400 PF00072 Response regulator receiver domain XCAW_02401 PF06745 KaiC XCAW_02402 PF00072 Response regulator receiver domain XCAW_02402 PF00486 Transcriptional regulatory protein, C terminal XCAW_02403 PF00072 Response regulator receiver domain XCAW_02403 PF13188 PAS domain XCAW_02403 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_02403 PF08448 PAS fold XCAW_02403 PF00512 His Kinase A (phospho-acceptor) domain XCAW_02407 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCAW_02407 PF00672 HAMP domain XCAW_02407 PF02203 Tar ligand binding domain homologue XCAW_02413 PF13333 Integrase core domain XCAW_02413 PF13276 HTH-like domain XCAW_02413 PF00665 Integrase core domain XCAW_02414 PF01527 Transposase XCAW_02415 PF01381 Helix-turn-helix XCAW_02416 PF05284 Protein of unknown function (DUF736) XCAW_02418 PF04002 RadC-like JAB domain XCAW_02423 PF00589 Phage integrase family XCAW_02423 PF13356 Arm DNA-binding domain XCAW_02426 PF00593 TonB dependent receptor XCAW_02426 PF07715 TonB-dependent Receptor Plug Domain XCAW_02430 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin XCAW_02435 PF07715 TonB-dependent Receptor Plug Domain XCAW_02435 PF00593 TonB dependent receptor XCAW_02436 PF10947 Protein of unknown function (DUF2628) XCAW_02438 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) XCAW_02438 PF00722 Glycosyl hydrolases family 16 XCAW_02442 PF00005 ABC transporter XCAW_02442 PF00664 ABC transporter transmembrane region XCAW_02442 PF03412 Peptidase C39 family XCAW_02445 PF13614 AAA domain XCAW_02455 PF00145 C-5 cytosine-specific DNA methylase XCAW_02465 PF06250 YhcG PDDEXK nuclease domain XCAW_02465 PF17761 DUF1016 N-terminal domain XCAW_02466 PF01527 Transposase XCAW_02467 PF13276 HTH-like domain XCAW_02467 PF00665 Integrase core domain XCAW_02467 PF13333 Integrase core domain XCAW_02468 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) XCAW_02479 PF00069 Protein kinase domain XCAW_02479 PF03793 PASTA domain XCAW_02483 PF01618 MotA/TolQ/ExbB proton channel family XCAW_02484 PF13677 Membrane MotB of proton-channel complex MotA/MotB XCAW_02484 PF00691 OmpA family XCAW_02485 PF13614 AAA domain XCAW_02486 PF01584 CheW-like domain XCAW_02488 PF00072 Response regulator receiver domain XCAW_02489 PF01584 CheW-like domain XCAW_02489 PF02895 Signal transducing histidine kinase, homodimeric domain XCAW_02489 PF09078 CheY binding XCAW_02489 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_02489 PF01627 Hpt domain XCAW_02490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCAW_02490 PF00672 HAMP domain XCAW_02490 PF02203 Tar ligand binding domain homologue XCAW_02492 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCAW_02492 PF17200 Single Cache domain 2 XCAW_02492 PF00672 HAMP domain XCAW_02492 PF17200 Single Cache domain 2 XCAW_02492 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCAW_02492 PF00672 HAMP domain XCAW_02493 PF02203 Tar ligand binding domain homologue XCAW_02493 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCAW_02493 PF00672 HAMP domain XCAW_02495 PF00672 HAMP domain XCAW_02495 PF02203 Tar ligand binding domain homologue XCAW_02495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCAW_02496 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCAW_02496 PF00672 HAMP domain XCAW_02497 PF00672 HAMP domain XCAW_02497 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCAW_02497 PF02203 Tar ligand binding domain homologue XCAW_02498 PF02203 Tar ligand binding domain homologue XCAW_02498 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCAW_02498 PF00672 HAMP domain XCAW_02499 PF02203 Tar ligand binding domain homologue XCAW_02499 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCAW_02499 PF00672 HAMP domain XCAW_02500 PF00672 HAMP domain XCAW_02500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCAW_02500 PF02203 Tar ligand binding domain homologue XCAW_02501 PF02203 Tar ligand binding domain homologue XCAW_02501 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCAW_02501 PF00672 HAMP domain XCAW_02502 PF00672 HAMP domain XCAW_02502 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCAW_02502 PF02203 Tar ligand binding domain homologue XCAW_02504 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCAW_02504 PF02203 Tar ligand binding domain homologue XCAW_02504 PF00672 HAMP domain XCAW_02505 PF07317 Flagellar regulator YcgR XCAW_02505 PF07238 PilZ domain XCAW_02506 PF01584 CheW-like domain XCAW_02508 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCAW_02508 PF02203 Tar ligand binding domain homologue XCAW_02508 PF00672 HAMP domain XCAW_02509 PF01739 CheR methyltransferase, SAM binding domain XCAW_02509 PF03705 CheR methyltransferase, all-alpha domain XCAW_02510 PF03975 CheD chemotactic sensory transduction XCAW_02511 PF01339 CheB methylesterase XCAW_02511 PF00072 Response regulator receiver domain XCAW_02512 PF00990 Diguanylate cyclase, GGDEF domain XCAW_02512 PF03707 Bacterial signalling protein N terminal repeat XCAW_02512 PF00563 EAL domain XCAW_02513 PF00561 alpha/beta hydrolase fold XCAW_02514 PF00330 Aconitase family (aconitate hydratase) XCAW_02514 PF11791 Aconitate B N-terminal domain XCAW_02514 PF06434 Aconitate hydratase 2 N-terminus XCAW_02517 PF00694 Aconitase C-terminal domain XCAW_02517 PF00330 Aconitase family (aconitate hydratase) XCAW_02519 PF00501 AMP-binding enzyme XCAW_02519 PF13193 AMP-binding enzyme C-terminal domain XCAW_02520 PF00378 Enoyl-CoA hydratase/isomerase XCAW_02521 PF00072 Response regulator receiver domain XCAW_02521 PF01627 Hpt domain XCAW_02521 PF00512 His Kinase A (phospho-acceptor) domain XCAW_02521 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_02522 PF00072 Response regulator receiver domain XCAW_02523 PF01336 OB-fold nucleic acid binding domain XCAW_02523 PF00152 tRNA synthetases class II (D, K and N) XCAW_02524 PF03462 PCRF domain XCAW_02524 PF00472 RF-1 domain XCAW_02525 PF04397 LytTr DNA-binding domain XCAW_02525 PF00072 Response regulator receiver domain XCAW_02534 PF02272 DHHA1 domain XCAW_02534 PF17768 RecJ OB domain XCAW_02534 PF01368 DHH family XCAW_02536 PF01272 Transcription elongation factor, GreA/GreB, C-term XCAW_02536 PF03449 Transcription elongation factor, N-terminal XCAW_02537 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain XCAW_02537 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XCAW_02537 PF02142 MGS-like domain XCAW_02539 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain XCAW_02539 PF00117 Glutamine amidotransferase class-I XCAW_02540 PF01113 Dihydrodipicolinate reductase, N-terminus XCAW_02540 PF05173 Dihydrodipicolinate reductase, C-terminus XCAW_02541 PF03473 MOSC domain XCAW_02541 PF03475 3-alpha domain XCAW_02542 PF00155 Aminotransferase class I and II XCAW_02545 PF07670 Nucleoside recognition XCAW_02545 PF02421 Ferrous iron transport protein B XCAW_02545 PF07664 Ferrous iron transport protein B C terminus XCAW_02547 PF00378 Enoyl-CoA hydratase/isomerase XCAW_02550 PF00682 HMGL-like XCAW_02551 PF00106 short chain dehydrogenase XCAW_02552 PF01132 Elongation factor P (EF-P) OB domain XCAW_02552 PF08207 Elongation factor P (EF-P) KOW-like domain XCAW_02552 PF09285 Elongation factor P, C-terminal XCAW_02556 PF02913 FAD linked oxidases, C-terminal domain XCAW_02556 PF01565 FAD binding domain XCAW_02557 PF01842 ACT domain XCAW_02557 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XCAW_02557 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XCAW_02559 PF13520 Amino acid permease XCAW_02560 PF13520 Amino acid permease XCAW_02561 PF00596 Class II Aldolase and Adducin N-terminal domain XCAW_02562 PF03079 ARD/ARD' family XCAW_02566 PF01502 Phosphoribosyl-AMP cyclohydrolase XCAW_02566 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase XCAW_02567 PF00977 Histidine biosynthesis protein XCAW_02568 PF00977 Histidine biosynthesis protein XCAW_02569 PF00117 Glutamine amidotransferase class-I XCAW_02570 PF00475 Imidazoleglycerol-phosphate dehydratase XCAW_02571 PF00155 Aminotransferase class I and II XCAW_02572 PF00815 Histidinol dehydrogenase XCAW_02573 PF08029 HisG, C-terminal domain XCAW_02573 PF01634 ATP phosphoribosyltransferase XCAW_02575 PF13393 Histidyl-tRNA synthetase XCAW_02575 PF03129 Anticodon binding domain XCAW_02576 PF00027 Cyclic nucleotide-binding domain XCAW_02576 PF13545 Crp-like helix-turn-helix domain XCAW_02578 PF14821 Threonine synthase N terminus XCAW_02578 PF00291 Pyridoxal-phosphate dependent enzyme XCAW_02580 PF08544 GHMP kinases C terminal XCAW_02580 PF00288 GHMP kinases N terminal domain XCAW_02581 PF03447 Homoserine dehydrogenase, NAD binding domain XCAW_02581 PF00742 Homoserine dehydrogenase XCAW_02581 PF13840 ACT domain XCAW_02581 PF01842 ACT domain XCAW_02581 PF00696 Amino acid kinase family XCAW_02583 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain XCAW_02583 PF13332 Hemagglutinin repeat XCAW_02583 PF13018 Extended Signal Peptide of Type V secretion system XCAW_02583 PF05594 Haemagluttinin repeat XCAW_02583 PF05860 haemagglutination activity domain XCAW_02586 PF05594 Haemagluttinin repeat XCAW_02586 PF04829 Pre-toxin domain with VENN motif XCAW_02586 PF13332 Hemagglutinin repeat XCAW_02588 PF13332 Hemagglutinin repeat XCAW_02588 PF05594 Haemagluttinin repeat XCAW_02588 PF04829 Pre-toxin domain with VENN motif XCAW_02589 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB XCAW_02589 PF17287 POTRA domain XCAW_02589 PF08479 POTRA domain, ShlB-type XCAW_02592 PF14883 Hypothetical glycosyl hydrolase family 13 XCAW_02592 PF01522 Polysaccharide deacetylase XCAW_02593 PF00535 Glycosyl transferase family 2 XCAW_02596 PF00171 Aldehyde dehydrogenase family XCAW_02600 PF01180 Dihydroorotate dehydrogenase XCAW_02601 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain XCAW_02601 PF01565 FAD binding domain XCAW_02602 PF00892 EamA-like transporter family XCAW_02603 PF01177 Asp/Glu/Hydantoin racemase XCAW_02604 PF07690 Major Facilitator Superfamily XCAW_02605 PF01569 PAP2 superfamily XCAW_02606 PF04551 GcpE protein XCAW_02608 PF00072 Response regulator receiver domain XCAW_02609 PF02013 Cellulose or protein binding domain XCAW_02609 PF00150 Cellulase (glycosyl hydrolase family 5) XCAW_02610 PF00990 Diguanylate cyclase, GGDEF domain XCAW_02610 PF01590 GAF domain XCAW_02610 PF00563 EAL domain XCAW_02610 PF00360 Phytochrome region XCAW_02611 PF00474 Sodium:solute symporter family XCAW_02612 PF00933 Glycosyl hydrolase family 3 N terminal domain XCAW_02612 PF14310 Fibronectin type III-like domain XCAW_02612 PF01915 Glycosyl hydrolase family 3 C-terminal domain XCAW_02617 PF00342 Phosphoglucose isomerase XCAW_02618 PF02261 Aspartate decarboxylase XCAW_02619 PF02569 Pantoate-beta-alanine ligase XCAW_02620 PF02548 Ketopantoate hydroxymethyltransferase XCAW_02621 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) XCAW_02622 PF12626 Polymerase A arginine-rich C-terminus XCAW_02622 PF12627 Probable RNA and SrmB- binding site of polymerase A XCAW_02622 PF01743 Poly A polymerase head domain XCAW_02624 PF02649 Type I GTP cyclohydrolase folE2 XCAW_02625 PF01520 N-acetylmuramoyl-L-alanine amidase XCAW_02627 PF00128 Alpha amylase, catalytic domain XCAW_02628 PF01527 Transposase XCAW_02638 PF03135 CagE, TrbE, VirB family, component of type IV transporter system XCAW_02641 PF01464 Transglycosylase SLT domain XCAW_02642 PF00437 Type II/IV secretion system protein XCAW_02643 PF03743 Bacterial conjugation TrbI-like protein XCAW_02647 PF02534 Type IV secretory system Conjugative DNA transfer XCAW_02650 PF12344 Ultra-violet resistance protein B XCAW_02650 PF17757 UvrB interaction domain XCAW_02650 PF04851 Type III restriction enzyme, res subunit XCAW_02650 PF00271 Helicase conserved C-terminal domain XCAW_02650 PF02151 UvrB/uvrC motif XCAW_02659 PF01527 Transposase XCAW_02660 PF13333 Integrase core domain XCAW_02660 PF00665 Integrase core domain XCAW_02660 PF13276 HTH-like domain XCAW_02668 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCAW_02668 PF03466 LysR substrate binding domain XCAW_02669 PF02525 Flavodoxin-like fold XCAW_02670 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XCAW_02670 PF02403 Seryl-tRNA synthetase N-terminal domain XCAW_02671 PF03544 Gram-negative bacterial TonB protein C-terminal XCAW_02673 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) XCAW_02674 PF01817 Chorismate mutase type II XCAW_02674 PF01842 ACT domain XCAW_02674 PF00800 Prephenate dehydratase XCAW_02675 PF00266 Aminotransferase class-V XCAW_02676 PF00174 Oxidoreductase molybdopterin binding domain XCAW_02677 PF01794 Ferric reductase like transmembrane component XCAW_02683 PF07702 UTRA domain XCAW_02683 PF00392 Bacterial regulatory proteins, gntR family XCAW_02685 PF07969 Amidohydrolase family XCAW_02686 PF00221 Aromatic amino acid lyase XCAW_02688 PF17391 Urocanase N-terminal domain XCAW_02688 PF01175 Urocanase Rossmann-like domain XCAW_02688 PF17392 Urocanase C-terminal domain XCAW_02691 PF03989 DNA gyrase C-terminal domain, beta-propeller XCAW_02691 PF00521 DNA gyrase/topoisomerase IV, subunit A XCAW_02692 PF01008 Initiation factor 2 subunit family XCAW_02694 PF00152 tRNA synthetases class II (D, K and N) XCAW_02695 PF12826 Helix-hairpin-helix motif XCAW_02695 PF00533 BRCA1 C Terminus (BRCT) domain XCAW_02695 PF03119 NAD-dependent DNA ligase C4 zinc finger domain XCAW_02695 PF03120 NAD-dependent DNA ligase OB-fold domain XCAW_02695 PF01653 NAD-dependent DNA ligase adenylation domain XCAW_02696 PF00155 Aminotransferase class I and II XCAW_02698 PF04354 ZipA, C-terminal FtsZ-binding domain XCAW_02699 PF02463 RecF/RecN/SMC N terminal domain XCAW_02700 PF03948 Ribosomal protein L9, C-terminal domain XCAW_02700 PF01281 Ribosomal protein L9, N-terminal domain XCAW_02701 PF01084 Ribosomal protein S18 XCAW_02702 PF01250 Ribosomal protein S6 XCAW_02703 PF01521 Iron-sulphur cluster biosynthesis XCAW_02704 PF01336 OB-fold nucleic acid binding domain XCAW_02704 PF00152 tRNA synthetases class II (D, K and N) XCAW_02708 PF04299 Putative FMN-binding domain XCAW_02711 PF00072 Response regulator receiver domain XCAW_02711 PF00196 Bacterial regulatory proteins, luxR family XCAW_02720 PF00484 Carbonic anhydrase XCAW_02721 PF06052 3-hydroxyanthranilic acid dioxygenase XCAW_02723 PF00266 Aminotransferase class-V XCAW_02724 PF01494 FAD binding domain XCAW_02726 PF00929 Exonuclease XCAW_02726 PF08411 Exonuclease C-terminal XCAW_02730 PF01513 ATP-NAD kinase XCAW_02731 PF01170 Putative RNA methylase family UPF0020 XCAW_02731 PF10672 S-adenosylmethionine-dependent methyltransferase XCAW_02731 PF02926 THUMP domain XCAW_02738 PF00581 Rhodanese-like domain XCAW_02739 PF00293 NUDIX domain XCAW_02740 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase XCAW_02740 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XCAW_02741 PF00378 Enoyl-CoA hydratase/isomerase XCAW_02743 PF10576 Iron-sulfur binding domain of endonuclease III XCAW_02743 PF00730 HhH-GPD superfamily base excision DNA repair protein XCAW_02743 PF00633 Helix-hairpin-helix motif XCAW_02744 PF00916 Sulfate permease family XCAW_02744 PF01740 STAS domain XCAW_02745 PF00484 Carbonic anhydrase XCAW_02749 PF12849 PBP superfamily domain XCAW_02750 PF12849 PBP superfamily domain XCAW_02751 PF00528 Binding-protein-dependent transport system inner membrane component XCAW_02752 PF00528 Binding-protein-dependent transport system inner membrane component XCAW_02753 PF00005 ABC transporter XCAW_02754 PF01895 PhoU domain XCAW_02756 PF00929 Exonuclease XCAW_02757 PF07694 5TMR of 5TMR-LYT XCAW_02757 PF00990 Diguanylate cyclase, GGDEF domain XCAW_02758 PF00588 SpoU rRNA Methylase family XCAW_02758 PF08032 RNA 2'-O ribose methyltransferase substrate binding XCAW_02760 PF00773 RNB domain XCAW_02760 PF08206 Ribonuclease B OB domain XCAW_02760 PF17876 Cold shock domain XCAW_02760 PF00575 S1 RNA binding domain XCAW_02760 PF08461 Ribonuclease R winged-helix domain XCAW_02763 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XCAW_02763 PF02770 Acyl-CoA dehydrogenase, middle domain XCAW_02763 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XCAW_02764 PF01209 ubiE/COQ5 methyltransferase family XCAW_02765 PF00809 Pterin binding enzyme XCAW_02765 PF02574 Homocysteine S-methyltransferase XCAW_02766 PF02310 B12 binding domain XCAW_02766 PF00809 Pterin binding enzyme XCAW_02766 PF02574 Homocysteine S-methyltransferase XCAW_02766 PF02965 Vitamin B12 dependent methionine synthase, activation domain XCAW_02766 PF02607 B12 binding domain XCAW_02768 PF00294 pfkB family carbohydrate kinase XCAW_02769 PF07690 Major Facilitator Superfamily XCAW_02770 PF00356 Bacterial regulatory proteins, lacI family XCAW_02773 PF04102 SlyX XCAW_02774 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain XCAW_02774 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain XCAW_02774 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain XCAW_02775 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XCAW_02775 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase XCAW_02776 PF00255 Glutathione peroxidase XCAW_02778 PF00392 Bacterial regulatory proteins, gntR family XCAW_02779 PF00005 ABC transporter XCAW_02784 PF00206 Lyase XCAW_02784 PF10415 Fumarase C C-terminus XCAW_02785 PF03471 Transporter associated domain XCAW_02785 PF01595 Cyclin M transmembrane N-terminal domain XCAW_02785 PF00571 CBS domain XCAW_02787 PF00206 Lyase XCAW_02787 PF08328 Adenylosuccinate lyase C-terminal XCAW_02789 PF08007 Cupin superfamily protein XCAW_02791 PF16870 2-oxoglutarate dehydrogenase C-terminal XCAW_02791 PF00676 Dehydrogenase E1 component XCAW_02791 PF16078 2-oxoglutarate dehydrogenase N-terminus XCAW_02791 PF02779 Transketolase, pyrimidine binding domain XCAW_02792 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XCAW_02792 PF00364 Biotin-requiring enzyme XCAW_02792 PF02817 e3 binding domain XCAW_02793 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XCAW_02793 PF07992 Pyridine nucleotide-disulphide oxidoreductase XCAW_02794 PF03641 Possible lysine decarboxylase XCAW_02795 PF01205 Uncharacterized protein family UPF0029 XCAW_02796 PF00005 ABC transporter XCAW_02796 PF00664 ABC transporter transmembrane region XCAW_02797 PF03466 LysR substrate binding domain XCAW_02797 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCAW_02798 PF00005 ABC transporter XCAW_02798 PF03412 Peptidase C39 family XCAW_02798 PF00664 ABC transporter transmembrane region XCAW_02803 PF08543 Phosphomethylpyrimidine kinase XCAW_02805 PF00684 DnaJ central domain XCAW_02805 PF00226 DnaJ domain XCAW_02805 PF01556 DnaJ C terminal domain XCAW_02806 PF00012 Hsp70 protein XCAW_02807 PF01025 GrpE XCAW_02808 PF01628 HrcA protein C terminal domain XCAW_02808 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding XCAW_02809 PF02463 RecF/RecN/SMC N terminal domain XCAW_02810 PF01475 Ferric uptake regulator family XCAW_02811 PF04355 SmpA / OmlA family XCAW_02812 PF03658 RnfH family Ubiquitin XCAW_02813 PF03364 Polyketide cyclase / dehydrase and lipid transport XCAW_02814 PF01668 SmpB protein XCAW_02815 PF00082 Subtilase family XCAW_02825 PF01527 Transposase XCAW_02836 PF05598 Transposase domain (DUF772) XCAW_02854 PF00990 Diguanylate cyclase, GGDEF domain XCAW_02856 PF00990 Diguanylate cyclase, GGDEF domain XCAW_02856 PF08448 PAS fold XCAW_02857 PF02321 Outer membrane efflux protein XCAW_02858 PF00106 short chain dehydrogenase XCAW_02859 PF00873 AcrB/AcrD/AcrF family XCAW_02860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XCAW_02860 PF00529 HlyD membrane-fusion protein of T1SS XCAW_02862 PF03466 LysR substrate binding domain XCAW_02862 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCAW_02864 PF00691 OmpA family XCAW_02864 PF05736 OprF membrane domain XCAW_02865 PF00875 DNA photolyase XCAW_02865 PF03441 FAD binding domain of DNA photolyase XCAW_02866 PF00772 DnaB-like helicase N terminal domain XCAW_02866 PF03796 DnaB-like helicase C terminal domain XCAW_02867 PF03358 NADPH-dependent FMN reductase XCAW_02868 PF00733 Asparagine synthase XCAW_02868 PF13537 Glutamine amidotransferase domain XCAW_02869 PF02798 Glutathione S-transferase, N-terminal domain XCAW_02869 PF00043 Glutathione S-transferase, C-terminal domain XCAW_02871 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XCAW_02871 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XCAW_02871 PF02770 Acyl-CoA dehydrogenase, middle domain XCAW_02874 PF01026 TatD related DNase XCAW_02875 PF00899 ThiF family XCAW_02878 PF00313 'Cold-shock' DNA-binding domain XCAW_02880 PF02253 Phospholipase A1 XCAW_02881 PF00484 Carbonic anhydrase XCAW_02883 PF05681 Fumarate hydratase (Fumerase) XCAW_02883 PF05683 Fumarase C-terminus XCAW_02884 PF00005 ABC transporter XCAW_02885 PF00175 Oxidoreductase NAD-binding domain XCAW_02885 PF00970 Oxidoreductase FAD-binding domain XCAW_02886 PF00255 Glutathione peroxidase XCAW_02887 PF01432 Peptidase family M3 XCAW_02888 PF12802 MarR family XCAW_02893 PF00854 POT family XCAW_02895 PF14310 Fibronectin type III-like domain XCAW_02895 PF00933 Glycosyl hydrolase family 3 N terminal domain XCAW_02895 PF01915 Glycosyl hydrolase family 3 C-terminal domain XCAW_02897 PF07690 Major Facilitator Superfamily XCAW_02898 PF00529 HlyD membrane-fusion protein of T1SS XCAW_02898 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XCAW_02899 PF02321 Outer membrane efflux protein XCAW_02902 PF00521 DNA gyrase/topoisomerase IV, subunit A XCAW_02902 PF03989 DNA gyrase C-terminal domain, beta-propeller XCAW_02904 PF05724 Thiopurine S-methyltransferase (TPMT) XCAW_02905 PF00210 Ferritin-like domain XCAW_02906 PF01804 Penicillin amidase XCAW_02908 PF00593 TonB dependent receptor XCAW_02908 PF07715 TonB-dependent Receptor Plug Domain XCAW_02910 PF00733 Asparagine synthase XCAW_02910 PF13537 Glutamine amidotransferase domain XCAW_02911 PF07687 Peptidase dimerisation domain XCAW_02911 PF01546 Peptidase family M20/M25/M40 XCAW_02912 PF03960 ArsC family XCAW_02913 PF00132 Bacterial transferase hexapeptide (six repeats) XCAW_02913 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal XCAW_02913 PF14602 Hexapeptide repeat of succinyl-transferase XCAW_02914 PF01966 HD domain XCAW_02914 PF01909 Nucleotidyltransferase domain XCAW_02914 PF08335 GlnD PII-uridylyltransferase XCAW_02915 PF00557 Metallopeptidase family M24 XCAW_02922 PF00318 Ribosomal protein S2 XCAW_02923 PF00889 Elongation factor TS XCAW_02924 PF00990 Diguanylate cyclase, GGDEF domain XCAW_02924 PF00072 Response regulator receiver domain XCAW_02925 PF00696 Amino acid kinase family XCAW_02926 PF01765 Ribosome recycling factor XCAW_02927 PF01255 Putative undecaprenyl diphosphate synthase XCAW_02929 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase XCAW_02929 PF13288 DXP reductoisomerase C-terminal domain XCAW_02929 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain XCAW_02930 PF17820 PDZ domain XCAW_02930 PF02163 Peptidase family M50 XCAW_02931 PF07244 Surface antigen variable number repeat XCAW_02931 PF01103 Surface antigen XCAW_02933 PF00132 Bacterial transferase hexapeptide (six repeats) XCAW_02933 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD XCAW_02934 PF07977 FabA-like domain XCAW_02935 PF00132 Bacterial transferase hexapeptide (six repeats) XCAW_02935 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 XCAW_02936 PF02684 Lipid-A-disaccharide synthetase XCAW_02937 PF01351 Ribonuclease HII XCAW_02938 PF17657 Bacterial DNA polymerase III alpha subunit finger domain XCAW_02938 PF01336 OB-fold nucleic acid binding domain XCAW_02938 PF07733 Bacterial DNA polymerase III alpha NTPase domain XCAW_02938 PF02811 PHP domain XCAW_02938 PF14579 Helix-hairpin-helix motif XCAW_02939 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit XCAW_02946 PF03551 Transcriptional regulator PadR-like family XCAW_02950 PF02592 Putative vitamin uptake transporter XCAW_02952 PF02574 Homocysteine S-methyltransferase XCAW_02953 PF00324 Amino acid permease XCAW_02954 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XCAW_02955 PF00005 ABC transporter XCAW_02955 PF13732 Domain of unknown function (DUF4162) XCAW_02958 PF01588 Putative tRNA binding domain XCAW_02958 PF09334 tRNA synthetases class I (M) XCAW_02961 PF04060 Putative Fe-S cluster XCAW_02964 PF04542 Sigma-70 region 2 XCAW_02964 PF04545 Sigma-70, region 4 XCAW_02973 PF01042 Endoribonuclease L-PSP XCAW_02975 PF03706 Lysylphosphatidylglycerol synthase TM region XCAW_02975 PF09924 Uncharacterised conserved protein (DUF2156) XCAW_02982 PF07690 Major Facilitator Superfamily XCAW_02983 PF00724 NADH:flavin oxidoreductase / NADH oxidase family XCAW_02985 PF03831 PhnA domain XCAW_02985 PF08274 PhnA Zinc-Ribbon XCAW_02987 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XCAW_02991 PF01258 Prokaryotic dksA/traR C4-type zinc finger XCAW_02993 PF07043 Protein of unknown function (DUF1328) XCAW_02994 PF01863 Protein of unknown function DUF45 XCAW_02996 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain XCAW_02996 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase XCAW_02997 PF12951 Passenger-associated-transport-repeat XCAW_02997 PF00082 Subtilase family XCAW_02997 PF03797 Autotransporter beta-domain XCAW_02998 PF00108 Thiolase, N-terminal domain XCAW_02998 PF02803 Thiolase, C-terminal domain XCAW_03003 PF00990 Diguanylate cyclase, GGDEF domain XCAW_03003 PF00072 Response regulator receiver domain XCAW_03006 PF01068 ATP dependent DNA ligase domain XCAW_03006 PF04675 DNA ligase N terminus XCAW_03006 PF04679 ATP dependent DNA ligase C terminal region XCAW_03007 PF04679 ATP dependent DNA ligase C terminal region XCAW_03007 PF04675 DNA ligase N terminus XCAW_03007 PF01068 ATP dependent DNA ligase domain XCAW_03008 PF08494 DEAD/H associated XCAW_03008 PF00270 DEAD/DEAH box helicase XCAW_03008 PF00271 Helicase conserved C-terminal domain XCAW_03010 PF01494 FAD binding domain XCAW_03011 PF00313 'Cold-shock' DNA-binding domain XCAW_03012 PF01048 Phosphorylase superfamily XCAW_03014 PF00933 Glycosyl hydrolase family 3 N terminal domain XCAW_03015 PF04244 Deoxyribodipyrimidine photo-lyase-related protein XCAW_03016 PF01593 Flavin containing amine oxidoreductase XCAW_03017 PF01323 DSBA-like thioredoxin domain XCAW_03019 PF05958 tRNA (Uracil-5-)-methyltransferase XCAW_03021 PF11967 Recombination protein O N terminal XCAW_03021 PF02565 Recombination protein O C terminal XCAW_03022 PF07650 KH domain XCAW_03022 PF01926 50S ribosome-binding GTPase XCAW_03023 PF14622 Ribonuclease-III-like XCAW_03023 PF00035 Double-stranded RNA binding motif XCAW_03025 PF10502 Signal peptidase, peptidase S26 XCAW_03026 PF00679 Elongation factor G C-terminus XCAW_03026 PF06421 GTP-binding protein LepA C-terminus XCAW_03026 PF03144 Elongation factor Tu domain 2 XCAW_03026 PF00009 Elongation factor Tu GTP binding domain XCAW_03027 PF13180 PDZ domain XCAW_03029 PF04542 Sigma-70 region 2 XCAW_03029 PF08281 Sigma-70, region 4 XCAW_03030 PF00378 Enoyl-CoA hydratase/isomerase XCAW_03030 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XCAW_03030 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain XCAW_03031 PF01545 Cation efflux family XCAW_03032 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase XCAW_03032 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase XCAW_03033 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain XCAW_03033 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XCAW_03033 PF00378 Enoyl-CoA hydratase/isomerase XCAW_03034 PF00378 Enoyl-CoA hydratase/isomerase XCAW_03035 PF02770 Acyl-CoA dehydrogenase, middle domain XCAW_03035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XCAW_03035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XCAW_03036 PF00171 Aldehyde dehydrogenase family XCAW_03037 PF01381 Helix-turn-helix XCAW_03037 PF06114 IrrE N-terminal-like domain XCAW_03037 PF09856 Predicted transcriptional regulator (DUF2083) XCAW_03039 PF07745 Glycosyl hydrolase family 53 XCAW_03040 PF02837 Glycosyl hydrolases family 2, sugar binding domain XCAW_03040 PF16355 Domain of unknown function (DUF4982) XCAW_03040 PF02836 Glycosyl hydrolases family 2, TIM barrel domain XCAW_03040 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 XCAW_03040 PF00703 Glycosyl hydrolases family 2 XCAW_03044 PF03527 RHS protein XCAW_03044 PF05593 RHS Repeat XCAW_03047 PF05188 MutS domain II XCAW_03047 PF05192 MutS domain III XCAW_03047 PF01624 MutS domain I XCAW_03047 PF00488 MutS domain V XCAW_03047 PF05190 MutS family domain IV XCAW_03050 PF00141 Peroxidase XCAW_03051 PF01479 S4 domain XCAW_03054 PF01554 MatE XCAW_03056 PF01245 Ribosomal protein L19 XCAW_03057 PF01746 tRNA (Guanine-1)-methyltransferase XCAW_03058 PF01782 RimM N-terminal domain XCAW_03058 PF05239 PRC-barrel domain XCAW_03059 PF00886 Ribosomal protein S16 XCAW_03060 PF01063 Amino-transferase class IV XCAW_03061 PF03060 Nitronate monooxygenase XCAW_03062 PF02881 SRP54-type protein, helical bundle domain XCAW_03062 PF00448 SRP54-type protein, GTPase domain XCAW_03062 PF02978 Signal peptide binding domain XCAW_03063 PF01578 Cytochrome C assembly protein XCAW_03064 PF01263 Aldose 1-epimerase XCAW_03065 PF06964 Alpha-L-arabinofuranosidase C-terminal domain XCAW_03066 PF00722 Glycosyl hydrolases family 16 XCAW_03067 PF00072 Response regulator receiver domain XCAW_03068 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_03068 PF13426 PAS domain XCAW_03068 PF00072 Response regulator receiver domain XCAW_03069 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_03069 PF00072 Response regulator receiver domain XCAW_03069 PF01627 Hpt domain XCAW_03069 PF00512 His Kinase A (phospho-acceptor) domain XCAW_03069 PF00672 HAMP domain XCAW_03069 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) XCAW_03070 PF01739 CheR methyltransferase, SAM binding domain XCAW_03070 PF03705 CheR methyltransferase, all-alpha domain XCAW_03071 PF01339 CheB methylesterase XCAW_03072 PF00512 His Kinase A (phospho-acceptor) domain XCAW_03072 PF02702 Osmosensitive K+ channel His kinase sensor domain XCAW_03072 PF13493 Domain of unknown function (DUF4118) XCAW_03072 PF13492 GAF domain XCAW_03072 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_03073 PF07237 Protein of unknown function (DUF1428) XCAW_03074 PF00085 Thioredoxin XCAW_03075 PF00593 TonB dependent receptor XCAW_03075 PF07715 TonB-dependent Receptor Plug Domain XCAW_03076 PF04616 Glycosyl hydrolases family 43 XCAW_03076 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain XCAW_03077 PF08448 PAS fold XCAW_03077 PF00072 Response regulator receiver domain XCAW_03077 PF00512 His Kinase A (phospho-acceptor) domain XCAW_03077 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_03077 PF13188 PAS domain XCAW_03078 PF00672 HAMP domain XCAW_03078 PF01627 Hpt domain XCAW_03078 PF00512 His Kinase A (phospho-acceptor) domain XCAW_03078 PF17149 Periplasmic sensor domain found in signal transduction proteins XCAW_03078 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_03078 PF00072 Response regulator receiver domain XCAW_03080 PF13581 Histidine kinase-like ATPase domain XCAW_03081 PF01740 STAS domain XCAW_03082 PF08678 Rsbr N terminal XCAW_03082 PF01740 STAS domain XCAW_03084 PF00183 Hsp90 protein XCAW_03084 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_03086 PF12833 Helix-turn-helix domain XCAW_03089 PF05656 Protein of unknown function (DUF805) XCAW_03090 PF18073 Rubredoxin metal binding domain XCAW_03092 PF03626 Prokaryotic Cytochrome C oxidase subunit IV XCAW_03093 PF00510 Cytochrome c oxidase subunit III XCAW_03094 PF00115 Cytochrome C and Quinol oxidase polypeptide I XCAW_03095 PF00116 Cytochrome C oxidase subunit II, periplasmic domain XCAW_03095 PF06481 COX Aromatic Rich Motif XCAW_03097 PF02401 LytB protein XCAW_03098 PF01252 Signal peptidase (SPase) II XCAW_03099 PF06827 Zinc finger found in FPG and IleRS XCAW_03099 PF08264 Anticodon-binding domain of tRNA XCAW_03099 PF00133 tRNA synthetases class I (I, L, M and V) XCAW_03100 PF01687 Riboflavin kinase XCAW_03100 PF06574 FAD synthetase XCAW_03101 PF03023 Lipid II flippase MurJ XCAW_03102 PF01649 Ribosomal protein S20 XCAW_03103 PF01926 50S ribosome-binding GTPase XCAW_03103 PF01018 GTP1/OBG XCAW_03104 PF01016 Ribosomal L27 protein XCAW_03105 PF00829 Ribosomal prokaryotic L21 protein XCAW_03106 PF17760 UvrA interaction domain XCAW_03106 PF00005 ABC transporter XCAW_03106 PF17755 UvrA DNA-binding domain XCAW_03109 PF00378 Enoyl-CoA hydratase/isomerase XCAW_03114 PF04376 Arginine-tRNA-protein transferase, N terminus XCAW_03114 PF04377 Arginine-tRNA-protein transferase, C terminus XCAW_03116 PF02222 ATP-grasp domain XCAW_03121 PF00730 HhH-GPD superfamily base excision DNA repair protein XCAW_03124 PF00196 Bacterial regulatory proteins, luxR family XCAW_03124 PF00072 Response regulator receiver domain XCAW_03125 PF07730 Histidine kinase XCAW_03127 PF03775 Septum formation inhibitor MinC, C-terminal domain XCAW_03127 PF05209 Septum formation inhibitor MinC, N-terminal domain XCAW_03128 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain XCAW_03129 PF03776 Septum formation topological specificity factor MinE XCAW_03131 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_03131 PF00512 His Kinase A (phospho-acceptor) domain XCAW_03131 PF08521 Two-component sensor kinase N-terminal XCAW_03132 PF00072 Response regulator receiver domain XCAW_03132 PF00486 Transcriptional regulatory protein, C terminal XCAW_03135 PF00884 Sulfatase XCAW_03135 PF08019 Phosphoethanolamine transferase EptA/EptB XCAW_03138 PF07690 Major Facilitator Superfamily XCAW_03139 PF02347 Glycine cleavage system P-protein XCAW_03140 PF00135 Carboxylesterase family XCAW_03141 PF00248 Aldo/keto reductase family XCAW_03143 PF18011 C-terminal domain found in long catalases XCAW_03143 PF06628 Catalase-related immune-responsive XCAW_03143 PF00199 Catalase XCAW_03150 PF01584 CheW-like domain XCAW_03150 PF09078 CheY binding XCAW_03150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_03150 PF01627 Hpt domain XCAW_03150 PF02895 Signal transducing histidine kinase, homodimeric domain XCAW_03151 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCAW_03151 PF00672 HAMP domain XCAW_03151 PF02203 Tar ligand binding domain homologue XCAW_03152 PF01584 CheW-like domain XCAW_03153 PF13426 PAS domain XCAW_03153 PF00990 Diguanylate cyclase, GGDEF domain XCAW_03153 PF00563 EAL domain XCAW_03154 PF01739 CheR methyltransferase, SAM binding domain XCAW_03154 PF03705 CheR methyltransferase, all-alpha domain XCAW_03155 PF00072 Response regulator receiver domain XCAW_03155 PF01339 CheB methylesterase XCAW_03156 PF13091 PLD-like domain XCAW_03157 PF05649 Peptidase family M13 XCAW_03157 PF01431 Peptidase family M13 XCAW_03159 PF00300 Histidine phosphatase superfamily (branch 1) XCAW_03160 PF04493 Endonuclease V XCAW_03162 PF02678 Pirin XCAW_03162 PF05726 Pirin C-terminal cupin domain XCAW_03165 PF02678 Pirin XCAW_03165 PF05726 Pirin C-terminal cupin domain XCAW_03166 PF13722 5TM C-terminal transporter carbon starvation CstA XCAW_03166 PF02554 Carbon starvation protein CstA XCAW_03167 PF04328 Selenoprotein, putative XCAW_03176 PF13478 XdhC Rossmann domain XCAW_03176 PF02625 XdhC and CoxI family XCAW_03177 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain XCAW_03177 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase XCAW_03178 PF03450 CO dehydrogenase flavoprotein C-terminal domain XCAW_03178 PF00941 FAD binding domain in molybdopterin dehydrogenase XCAW_03179 PF01799 [2Fe-2S] binding domain XCAW_03179 PF00111 2Fe-2S iron-sulfur cluster binding domain XCAW_03179 PF10518 TAT (twin-arginine translocation) pathway signal sequence XCAW_03180 PF08659 KR domain XCAW_03180 PF08240 Alcohol dehydrogenase GroES-like domain XCAW_03180 PF00698 Acyl transferase domain XCAW_03180 PF09277 Erythronolide synthase, docking XCAW_03180 PF16197 Ketoacyl-synthetase C-terminal extension XCAW_03180 PF08990 Erythronolide synthase docking XCAW_03180 PF14765 Polyketide synthase dehydratase XCAW_03180 PF00550 Phosphopantetheine attachment site XCAW_03180 PF00109 Beta-ketoacyl synthase, N-terminal domain XCAW_03180 PF02801 Beta-ketoacyl synthase, C-terminal domain XCAW_03181 PF01590 GAF domain XCAW_03181 PF00990 Diguanylate cyclase, GGDEF domain XCAW_03181 PF00360 Phytochrome region XCAW_03181 PF00563 EAL domain XCAW_03182 PF00436 Single-strand binding protein family XCAW_03183 PF00348 Polyprenyl synthetase XCAW_03185 PF02875 Mur ligase family, glutamate ligase domain XCAW_03185 PF08245 Mur ligase middle domain XCAW_03188 PF01842 ACT domain XCAW_03188 PF00696 Amino acid kinase family XCAW_03190 PF02567 Phenazine biosynthesis-like protein XCAW_03191 PF02567 Phenazine biosynthesis-like protein XCAW_03193 PF02566 OsmC-like protein XCAW_03194 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain XCAW_03194 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain XCAW_03195 PF03652 Holliday junction resolvase XCAW_03196 PF02622 Uncharacterized ACR, COG1678 XCAW_03197 PF13673 Acetyltransferase (GNAT) domain XCAW_03197 PF00958 GMP synthase C terminal domain XCAW_03197 PF03352 Methyladenine glycosylase XCAW_03197 PF13302 Acetyltransferase (GNAT) domain XCAW_03197 PF00117 Glutamine amidotransferase class-I XCAW_03200 PF03211 Pectate lyase XCAW_03201 PF00437 Type II/IV secretion system protein XCAW_03202 PF00437 Type II/IV secretion system protein XCAW_03203 PF01168 Alanine racemase, N-terminal domain XCAW_03204 PF14748 Pyrroline-5-carboxylate reductase dimerisation XCAW_03204 PF03807 NADP oxidoreductase coenzyme F420-dependent XCAW_03206 PF01551 Peptidase family M23 XCAW_03210 PF01965 DJ-1/PfpI family XCAW_03212 PF02082 Transcriptional regulator XCAW_03213 PF01458 Uncharacterized protein family (UPF0051) XCAW_03214 PF00005 ABC transporter XCAW_03215 PF01458 Uncharacterized protein family (UPF0051) XCAW_03216 PF00266 Aminotransferase class-V XCAW_03218 PF00355 Rieske [2Fe-2S] domain XCAW_03219 PF07715 TonB-dependent Receptor Plug Domain XCAW_03219 PF00593 TonB dependent receptor XCAW_03220 PF13640 2OG-Fe(II) oxygenase superfamily XCAW_03220 PF18331 PKHD-type hydroxylase C-terminal domain XCAW_03225 PF02424 ApbE family XCAW_03226 PF00667 FAD binding domain XCAW_03226 PF00175 Oxidoreductase NAD-binding domain XCAW_03226 PF00258 Flavodoxin XCAW_03230 PF07687 Peptidase dimerisation domain XCAW_03230 PF01546 Peptidase family M20/M25/M40 XCAW_03232 PF01636 Phosphotransferase enzyme family XCAW_03233 PF00483 Nucleotidyl transferase XCAW_03234 PF00308 Bacterial dnaA protein XCAW_03235 PF01594 AI-2E family transporter XCAW_03237 PF02769 AIR synthase related protein, C-terminal domain XCAW_03237 PF00586 AIR synthase related protein, N-terminal domain XCAW_03239 PF00551 Formyl transferase XCAW_03243 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) XCAW_03244 PF01722 BolA-like protein XCAW_03245 PF00571 CBS domain XCAW_03245 PF01380 SIS domain XCAW_03248 PF03968 OstA-like protein XCAW_03249 PF00005 ABC transporter XCAW_03250 PF04552 Sigma-54, DNA binding domain XCAW_03250 PF04963 Sigma-54 factor, core binding domain XCAW_03250 PF00309 Sigma-54 factor, Activator interacting domain (AID) XCAW_03251 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein XCAW_03252 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 XCAW_03253 PF07475 HPr Serine kinase C-terminal domain XCAW_03253 PF02603 HPr Serine kinase N terminus XCAW_03254 PF03668 P-loop ATPase protein family XCAW_03256 PF00381 PTS HPr component phosphorylation site XCAW_03257 PF02896 PEP-utilising enzyme, TIM barrel domain XCAW_03257 PF00391 PEP-utilising enzyme, mobile domain XCAW_03257 PF05524 PEP-utilising enzyme, N-terminal XCAW_03258 PF00571 CBS domain XCAW_03258 PF01769 Divalent cation transporter XCAW_03258 PF03448 MgtE intracellular N domain XCAW_03259 PF00756 Putative esterase XCAW_03260 PF02322 Cytochrome bd terminal oxidase subunit II XCAW_03261 PF01654 Cytochrome bd terminal oxidase subunit I XCAW_03263 PF00324 Amino acid permease XCAW_03264 PF00544 Pectate lyase XCAW_03265 PF00561 alpha/beta hydrolase fold XCAW_03266 PF00196 Bacterial regulatory proteins, luxR family XCAW_03267 PF00324 Amino acid permease XCAW_03273 PF12706 Beta-lactamase superfamily domain XCAW_03274 PF04820 Tryptophan halogenase XCAW_03280 PF09278 MerR, DNA binding XCAW_03280 PF00376 MerR family regulatory protein XCAW_03281 PF07690 Major Facilitator Superfamily XCAW_03283 PF03738 Glutathionylspermidine synthase preATP-grasp XCAW_03288 PF04012 PspA/IM30 family XCAW_03290 PF01243 Pyridoxamine 5'-phosphate oxidase XCAW_03290 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region XCAW_03291 PF01202 Shikimate kinase XCAW_03292 PF01761 3-dehydroquinate synthase XCAW_03294 PF01208 Uroporphyrinogen decarboxylase (URO-D) XCAW_03309 PF02954 Bacterial regulatory protein, Fis family XCAW_03309 PF00158 Sigma-54 interaction domain XCAW_03309 PF01590 GAF domain XCAW_03310 PF07690 Major Facilitator Superfamily XCAW_03311 PF17149 Periplasmic sensor domain found in signal transduction proteins XCAW_03311 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_03311 PF01627 Hpt domain XCAW_03311 PF00672 HAMP domain XCAW_03311 PF00072 Response regulator receiver domain XCAW_03311 PF00512 His Kinase A (phospho-acceptor) domain XCAW_03312 PF00072 Response regulator receiver domain XCAW_03312 PF01627 Hpt domain XCAW_03312 PF00512 His Kinase A (phospho-acceptor) domain XCAW_03312 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_03312 PF00672 HAMP domain XCAW_03312 PF17149 Periplasmic sensor domain found in signal transduction proteins XCAW_03315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_03315 PF00512 His Kinase A (phospho-acceptor) domain XCAW_03315 PF00072 Response regulator receiver domain XCAW_03315 PF01627 Hpt domain XCAW_03316 PF04264 YceI-like domain XCAW_03320 PF03315 Serine dehydratase beta chain XCAW_03320 PF03313 Serine dehydratase alpha chain XCAW_03321 PF12697 Alpha/beta hydrolase family XCAW_03322 PF00696 Amino acid kinase family XCAW_03322 PF03447 Homoserine dehydrogenase, NAD binding domain XCAW_03322 PF00742 Homoserine dehydrogenase XCAW_03323 PF01053 Cys/Met metabolism PLP-dependent enzyme XCAW_03324 PF00561 alpha/beta hydrolase fold XCAW_03325 PF01551 Peptidase family M23 XCAW_03325 PF08525 Opacity-associated protein A N-terminal motif XCAW_03325 PF01476 LysM domain XCAW_03326 PF16658 Class II release factor RF3, C-terminal domain XCAW_03326 PF00009 Elongation factor Tu GTP binding domain XCAW_03327 PF03006 Haemolysin-III related XCAW_03328 PF05170 AsmA family XCAW_03329 PF00478 IMP dehydrogenase / GMP reductase domain XCAW_03329 PF00571 CBS domain XCAW_03330 PF00535 Glycosyl transferase family 2 XCAW_03331 PF00912 Transglycosylase XCAW_03332 PF01430 Hsp33 protein XCAW_03334 PF00593 TonB dependent receptor XCAW_03334 PF07715 TonB-dependent Receptor Plug Domain XCAW_03338 PF00440 Bacterial regulatory proteins, tetR family XCAW_03339 PF00561 alpha/beta hydrolase fold XCAW_03340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XCAW_03340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XCAW_03340 PF09317 Domain of unknown function (DUF1974) XCAW_03345 PF01597 Glycine cleavage H-protein XCAW_03346 PF08669 Glycine cleavage T-protein C-terminal barrel domain XCAW_03346 PF01571 Aminomethyltransferase folate-binding domain XCAW_03348 PF01145 SPFH domain / Band 7 family XCAW_03348 PF16200 C-terminal region of band_7 XCAW_03350 PF02694 Uncharacterised BCR, YnfA/UPF0060 family XCAW_03351 PF03819 MazG nucleotide pyrophosphohydrolase domain XCAW_03352 PF00459 Inositol monophosphatase family XCAW_03353 PF00293 NUDIX domain XCAW_03354 PF00202 Aminotransferase class-III XCAW_03355 PF04452 RNA methyltransferase XCAW_03356 PF02685 Glucokinase XCAW_03360 PF01476 LysM domain XCAW_03360 PF00704 Glycosyl hydrolases family 18 XCAW_03361 PF00728 Glycosyl hydrolase family 20, catalytic domain XCAW_03361 PF02838 Glycosyl hydrolase family 20, domain 2 XCAW_03361 PF07691 PA14 domain XCAW_03363 PF01915 Glycosyl hydrolase family 3 C-terminal domain XCAW_03363 PF07691 PA14 domain XCAW_03363 PF00933 Glycosyl hydrolase family 3 N terminal domain XCAW_03363 PF14310 Fibronectin type III-like domain XCAW_03365 PF01301 Glycosyl hydrolases family 35 XCAW_03366 PF13520 Amino acid permease XCAW_03368 PF11975 Family 4 glycosyl hydrolase C-terminal domain XCAW_03368 PF02056 Family 4 glycosyl hydrolase XCAW_03370 PF07971 Glycosyl hydrolase family 92 XCAW_03370 PF17678 Glycosyl hydrolase family 92 N-terminal domain XCAW_03371 PF01301 Glycosyl hydrolases family 35 XCAW_03377 PF03932 CutC family XCAW_03378 PF01112 Asparaginase XCAW_03381 PF13302 Acetyltransferase (GNAT) domain XCAW_03384 PF01584 CheW-like domain XCAW_03384 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_03384 PF01627 Hpt domain XCAW_03384 PF00072 Response regulator receiver domain XCAW_03385 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term XCAW_03385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCAW_03387 PF00072 Response regulator receiver domain XCAW_03389 PF00072 Response regulator receiver domain XCAW_03390 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain XCAW_03390 PF02951 Prokaryotic glutathione synthetase, N-terminal domain XCAW_03392 PF03747 ADP-ribosylglycohydrolase XCAW_03393 PF00814 Glycoprotease family XCAW_03394 PF13307 Helicase C-terminal domain XCAW_03394 PF04851 Type III restriction enzyme, res subunit XCAW_03396 PF00912 Transglycosylase XCAW_03396 PF00905 Penicillin binding protein transpeptidase domain XCAW_03396 PF14814 Bifunctional transglycosylase second domain XCAW_03397 PF00535 Glycosyl transferase family 2 XCAW_03399 PF02824 TGS domain XCAW_03399 PF13291 ACT domain XCAW_03399 PF04607 Region found in RelA / SpoT proteins XCAW_03400 PF12706 Beta-lactamase superfamily domain XCAW_03401 PF03070 TENA/THI-4/PQQC family XCAW_03402 PF05402 Coenzyme PQQ synthesis protein D (PqqD) XCAW_03403 PF04055 Radical SAM superfamily XCAW_03403 PF13186 Iron-sulfur cluster-binding domain XCAW_03406 PF02685 Glucokinase XCAW_03408 PF00271 Helicase conserved C-terminal domain XCAW_03408 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold XCAW_03408 PF04408 Helicase associated domain (HA2) XCAW_03408 PF00270 DEAD/DEAH box helicase XCAW_03408 PF11898 Domain of unknown function (DUF3418) XCAW_03409 PF00210 Ferritin-like domain XCAW_03410 PF09382 RQC domain XCAW_03410 PF00271 Helicase conserved C-terminal domain XCAW_03410 PF00270 DEAD/DEAH box helicase XCAW_03410 PF00570 HRDC domain XCAW_03410 PF16124 RecQ zinc-binding XCAW_03417 PF00672 HAMP domain XCAW_03417 PF02203 Tar ligand binding domain homologue XCAW_03417 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCAW_03421 PF07536 HWE histidine kinase XCAW_03421 PF13581 Histidine kinase-like ATPase domain XCAW_03421 PF13426 PAS domain XCAW_03422 PF06508 Queuosine biosynthesis protein QueC XCAW_03424 PF04055 Radical SAM superfamily XCAW_03426 PF00691 OmpA family XCAW_03427 PF07676 WD40-like Beta Propeller Repeat XCAW_03427 PF04052 TolB amino-terminal domain XCAW_03429 PF02472 Biopolymer transport protein ExbD/TolR XCAW_03430 PF01618 MotA/TolQ/ExbB proton channel family XCAW_03431 PF03061 Thioesterase superfamily XCAW_03432 PF17864 RuvB AAA lid domain XCAW_03432 PF05491 RuvB C-terminal winged helix domain XCAW_03432 PF05496 Holliday junction DNA helicase RuvB P-loop domain XCAW_03434 PF02705 K+ potassium transporter XCAW_03435 PF07499 RuvA, C-terminal domain XCAW_03435 PF01330 RuvA N terminal domain XCAW_03436 PF02075 Crossover junction endodeoxyribonuclease RuvC XCAW_03437 PF01709 Transcriptional regulator XCAW_03440 PF01336 OB-fold nucleic acid binding domain XCAW_03440 PF00152 tRNA synthetases class II (D, K and N) XCAW_03440 PF02938 GAD domain XCAW_03443 PF07690 Major Facilitator Superfamily XCAW_03446 PF04185 Phosphoesterase family XCAW_03446 PF05506 Domain of unknown function (DUF756) XCAW_03449 PF03466 LysR substrate binding domain XCAW_03449 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCAW_03451 PF00005 ABC transporter XCAW_03451 PF12848 ABC transporter XCAW_03452 PF07715 TonB-dependent Receptor Plug Domain XCAW_03452 PF00593 TonB dependent receptor XCAW_03455 PF00593 TonB dependent receptor XCAW_03455 PF07715 TonB-dependent Receptor Plug Domain XCAW_03456 PF00593 TonB dependent receptor XCAW_03456 PF07715 TonB-dependent Receptor Plug Domain XCAW_03457 PF00067 Cytochrome P450 XCAW_03458 PF02254 TrkA-N domain XCAW_03458 PF00999 Sodium/hydrogen exchanger family XCAW_03463 PF00593 TonB dependent receptor XCAW_03463 PF07660 Secretin and TonB N terminus short domain XCAW_03463 PF07715 TonB-dependent Receptor Plug Domain XCAW_03465 PF04183 IucA / IucC family XCAW_03465 PF06276 Ferric iron reductase FhuF-like transporter XCAW_03466 PF07690 Major Facilitator Superfamily XCAW_03468 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain XCAW_03468 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain XCAW_03471 PF02654 Cobalamin-5-phosphate synthase XCAW_03473 PF02277 Phosphoribosyltransferase XCAW_03474 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase XCAW_03475 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain XCAW_03475 PF07685 CobB/CobQ-like glutamine amidotransferase domain XCAW_03476 PF00155 Aminotransferase class I and II XCAW_03477 PF17113 Regulatory signalling modulator protein AmpE XCAW_03477 PF03186 CobD/Cbib protein XCAW_03478 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP XCAW_03478 PF12557 Cob(I)alamin adenosyltransferase N terminal XCAW_03481 PF00593 TonB dependent receptor XCAW_03481 PF07715 TonB-dependent Receptor Plug Domain XCAW_03482 PF00004 ATPase family associated with various cellular activities (AAA) XCAW_03482 PF17871 AAA lid domain XCAW_03482 PF10431 C-terminal, D2-small domain, of ClpB protein XCAW_03482 PF02861 Clp amino terminal domain, pathogenicity island component XCAW_03482 PF07724 AAA domain (Cdc48 subfamily) XCAW_03483 PF00005 ABC transporter XCAW_03484 PF00528 Binding-protein-dependent transport system inner membrane component XCAW_03485 PF09084 NMT1/THI5 like XCAW_03486 PF00248 Aldo/keto reductase family XCAW_03488 PF00593 TonB dependent receptor XCAW_03488 PF07715 TonB-dependent Receptor Plug Domain XCAW_03490 PF01541 GIY-YIG catalytic domain XCAW_03497 PF07715 TonB-dependent Receptor Plug Domain XCAW_03497 PF00593 TonB dependent receptor XCAW_03499 PF02358 Trehalose-phosphatase XCAW_03500 PF00723 Glycosyl hydrolases family 15 XCAW_03501 PF00982 Glycosyltransferase family 20 XCAW_03502 PF01011 PQQ enzyme repeat XCAW_03503 PF02203 Tar ligand binding domain homologue XCAW_03503 PF00672 HAMP domain XCAW_03503 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCAW_03504 PF04134 Protein of unknown function, DUF393 XCAW_03507 PF00849 RNA pseudouridylate synthase XCAW_03508 PF13525 Outer membrane lipoprotein XCAW_03510 PF02540 NAD synthase XCAW_03510 PF00795 Carbon-nitrogen hydrolase XCAW_03511 PF01527 Transposase XCAW_03513 PF13333 Integrase core domain XCAW_03513 PF13276 HTH-like domain XCAW_03513 PF00665 Integrase core domain XCAW_03516 PF13406 Transglycosylase SLT domain XCAW_03517 PF13700 Domain of unknown function (DUF4158) XCAW_03517 PF01526 Tn3 transposase DDE domain XCAW_03521 PF02796 Helix-turn-helix domain of resolvase XCAW_03521 PF00665 Integrase core domain XCAW_03522 PF01695 IstB-like ATP binding protein XCAW_03527 PF01527 Transposase XCAW_03528 PF13333 Integrase core domain XCAW_03528 PF13276 HTH-like domain XCAW_03528 PF00665 Integrase core domain XCAW_03534 PF00180 Isocitrate/isopropylmalate dehydrogenase XCAW_03536 PF00462 Glutaredoxin XCAW_03537 PF13181 Tetratricopeptide repeat XCAW_03537 PF01435 Peptidase family M48 XCAW_03538 PF00486 Transcriptional regulatory protein, C terminal XCAW_03538 PF00072 Response regulator receiver domain XCAW_03539 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_03539 PF00512 His Kinase A (phospho-acceptor) domain XCAW_03539 PF00989 PAS fold XCAW_03539 PF11808 Phosphate regulon sensor protein PhoR XCAW_03540 PF17941 Polyphosphate kinase C-terminal domain 1 XCAW_03540 PF13089 Polyphosphate kinase N-terminal domain XCAW_03540 PF02503 Polyphosphate kinase middle domain XCAW_03540 PF13090 Polyphosphate kinase C-terminal domain 2 XCAW_03541 PF02541 Ppx/GppA phosphatase family XCAW_03542 PF13439 Glycosyltransferase Family 4 XCAW_03542 PF00534 Glycosyl transferases group 1 XCAW_03543 PF01569 PAP2 superfamily XCAW_03546 PF00149 Calcineurin-like phosphoesterase XCAW_03550 PF00156 Phosphoribosyl transferase domain XCAW_03553 PF08245 Mur ligase middle domain XCAW_03553 PF02875 Mur ligase family, glutamate ligase domain XCAW_03554 PF00300 Histidine phosphatase superfamily (branch 1) XCAW_03555 PF10459 Peptidase S46 XCAW_03556 PF10459 Peptidase S46 XCAW_03557 PF10459 Peptidase S46 XCAW_03558 PF04185 Phosphoesterase family XCAW_03558 PF05506 Domain of unknown function (DUF756) XCAW_03560 PF00107 Zinc-binding dehydrogenase XCAW_03560 PF08240 Alcohol dehydrogenase GroES-like domain XCAW_03562 PF17850 CysA C-terminal regulatory domain XCAW_03562 PF00005 ABC transporter XCAW_03562 PF12857 TOBE-like domain XCAW_03563 PF00528 Binding-protein-dependent transport system inner membrane component XCAW_03564 PF00528 Binding-protein-dependent transport system inner membrane component XCAW_03566 PF00155 Aminotransferase class I and II XCAW_03568 PF00849 RNA pseudouridylate synthase XCAW_03570 PF05736 OprF membrane domain XCAW_03570 PF00691 OmpA family XCAW_03571 PF08240 Alcohol dehydrogenase GroES-like domain XCAW_03571 PF00107 Zinc-binding dehydrogenase XCAW_03572 PF07992 Pyridine nucleotide-disulphide oxidoreductase XCAW_03572 PF00724 NADH:flavin oxidoreductase / NADH oxidase family XCAW_03575 PF02798 Glutathione S-transferase, N-terminal domain XCAW_03575 PF00043 Glutathione S-transferase, C-terminal domain XCAW_03576 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain XCAW_03576 PF00056 lactate/malate dehydrogenase, NAD binding domain XCAW_03577 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD XCAW_03580 PF01425 Amidase XCAW_03582 PF01474 Class-II DAHP synthetase family XCAW_03584 PF02600 Disulfide bond formation protein DsbB XCAW_03585 PF01196 Ribosomal protein L17 XCAW_03586 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain XCAW_03586 PF01000 RNA polymerase Rpb3/RpoA insert domain XCAW_03586 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain XCAW_03587 PF01479 S4 domain XCAW_03587 PF00163 Ribosomal protein S4/S9 N-terminal domain XCAW_03588 PF00411 Ribosomal protein S11 XCAW_03589 PF00416 Ribosomal protein S13/S18 XCAW_03590 PF00344 SecY translocase XCAW_03591 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A XCAW_03592 PF00327 Ribosomal protein L30p/L7e XCAW_03593 PF00333 Ribosomal protein S5, N-terminal domain XCAW_03593 PF03719 Ribosomal protein S5, C-terminal domain XCAW_03594 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast XCAW_03595 PF00347 Ribosomal protein L6 XCAW_03596 PF00410 Ribosomal protein S8 XCAW_03597 PF00253 Ribosomal protein S14p/S29e XCAW_03598 PF00281 Ribosomal protein L5 XCAW_03598 PF00673 ribosomal L5P family C-terminus XCAW_03599 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 XCAW_03599 PF00467 KOW motif XCAW_03600 PF00238 Ribosomal protein L14p/L23e XCAW_03601 PF00366 Ribosomal protein S17 XCAW_03602 PF00831 Ribosomal L29 protein XCAW_03603 PF00252 Ribosomal protein L16p/L10e XCAW_03604 PF00189 Ribosomal protein S3, C-terminal domain XCAW_03604 PF07650 KH domain XCAW_03605 PF00237 Ribosomal protein L22p/L17e XCAW_03606 PF00203 Ribosomal protein S19 XCAW_03607 PF03947 Ribosomal Proteins L2, C-terminal domain XCAW_03607 PF00181 Ribosomal Proteins L2, RNA binding domain XCAW_03608 PF00276 Ribosomal protein L23 XCAW_03609 PF00573 Ribosomal protein L4/L1 family XCAW_03610 PF00297 Ribosomal protein L3 XCAW_03611 PF00338 Ribosomal protein S10p/S20e XCAW_03612 PF00009 Elongation factor Tu GTP binding domain XCAW_03612 PF03144 Elongation factor Tu domain 2 XCAW_03612 PF03143 Elongation factor Tu C-terminal domain XCAW_03613 PF00679 Elongation factor G C-terminus XCAW_03613 PF03764 Elongation factor G, domain IV XCAW_03613 PF00009 Elongation factor Tu GTP binding domain XCAW_03613 PF03144 Elongation factor Tu domain 2 XCAW_03613 PF14492 Elongation Factor G, domain II XCAW_03614 PF00177 Ribosomal protein S7p/S5e XCAW_03615 PF00164 Ribosomal protein S12/S23 XCAW_03616 PF04998 RNA polymerase Rpb1, domain 5 XCAW_03616 PF04997 RNA polymerase Rpb1, domain 1 XCAW_03616 PF00623 RNA polymerase Rpb1, domain 2 XCAW_03616 PF05000 RNA polymerase Rpb1, domain 4 XCAW_03616 PF04983 RNA polymerase Rpb1, domain 3 XCAW_03617 PF04565 RNA polymerase Rpb2, domain 3 XCAW_03617 PF04563 RNA polymerase beta subunit XCAW_03617 PF04560 RNA polymerase Rpb2, domain 7 XCAW_03617 PF10385 RNA polymerase beta subunit external 1 domain XCAW_03617 PF00562 RNA polymerase Rpb2, domain 6 XCAW_03617 PF04561 RNA polymerase Rpb2, domain 2 XCAW_03618 PF16320 Ribosomal protein L7/L12 dimerisation domain XCAW_03618 PF00542 Ribosomal protein L7/L12 C-terminal domain XCAW_03619 PF00466 Ribosomal protein L10 XCAW_03620 PF00687 Ribosomal protein L1p/L10e family XCAW_03621 PF00298 Ribosomal protein L11, RNA binding domain XCAW_03621 PF03946 Ribosomal protein L11, N-terminal domain XCAW_03622 PF00467 KOW motif XCAW_03622 PF02357 Transcription termination factor nusG XCAW_03623 PF00584 SecE/Sec61-gamma subunits of protein translocation complex XCAW_03625 PF03144 Elongation factor Tu domain 2 XCAW_03625 PF00009 Elongation factor Tu GTP binding domain XCAW_03625 PF03143 Elongation factor Tu C-terminal domain XCAW_03629 PF01926 50S ribosome-binding GTPase XCAW_03629 PF06071 Protein of unknown function (DUF933) XCAW_03630 PF01195 Peptidyl-tRNA hydrolase XCAW_03631 PF14693 Ribosomal protein TL5, C-terminal domain XCAW_03631 PF01386 Ribosomal L25p family XCAW_03632 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase XCAW_03632 PF14572 Phosphoribosyl synthetase-associated domain XCAW_03634 PF08544 GHMP kinases C terminal XCAW_03634 PF00288 GHMP kinases N terminal domain XCAW_03635 PF03550 Outer membrane lipoprotein LolB XCAW_03637 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain XCAW_03637 PF01488 Shikimate / quinate 5-dehydrogenase XCAW_03637 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain XCAW_03638 PF03462 PCRF domain XCAW_03638 PF00472 RF-1 domain XCAW_03640 PF00994 Probable molybdopterin binding domain XCAW_03641 PF03976 Polyphosphate kinase 2 (PPK2) XCAW_03643 PF00708 Acylphosphatase XCAW_03644 PF08534 Redoxin XCAW_03645 PF03631 Virulence factor BrkB XCAW_03646 PF03358 NADPH-dependent FMN reductase XCAW_03648 PF17189 Glycosyl hydrolase family 30 beta sandwich domain XCAW_03648 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain XCAW_03649 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain XCAW_03649 PF17189 Glycosyl hydrolase family 30 beta sandwich domain XCAW_03651 PF04073 Aminoacyl-tRNA editing domain XCAW_03652 PF04151 Bacterial pre-peptidase C-terminal domain XCAW_03652 PF00082 Subtilase family XCAW_03653 PF04151 Bacterial pre-peptidase C-terminal domain XCAW_03653 PF00082 Subtilase family XCAW_03654 PF04151 Bacterial pre-peptidase C-terminal domain XCAW_03654 PF00082 Subtilase family XCAW_03655 PF01063 Amino-transferase class IV XCAW_03658 PF02233 NAD(P) transhydrogenase beta subunit XCAW_03659 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch XCAW_03663 PF05222 Alanine dehydrogenase/PNT, N-terminal domain XCAW_03663 PF01262 Alanine dehydrogenase/PNT, C-terminal domain XCAW_03663 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch XCAW_03669 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain XCAW_03669 PF01367 5'-3' exonuclease, C-terminal SAM fold XCAW_03669 PF01612 3'-5' exonuclease XCAW_03669 PF00476 DNA polymerase family A XCAW_03670 PF00293 NUDIX domain XCAW_03672 PF00561 alpha/beta hydrolase fold XCAW_03673 PF17827 PrmC N-terminal domain XCAW_03673 PF05175 Methyltransferase small domain XCAW_03674 PF00578 AhpC/TSA family XCAW_03674 PF10417 C-terminal domain of 1-Cys peroxiredoxin XCAW_03675 PF07992 Pyridine nucleotide-disulphide oxidoreductase XCAW_03675 PF13192 Thioredoxin domain XCAW_03676 PF03466 LysR substrate binding domain XCAW_03676 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCAW_03677 PF14760 Rnk N-terminus XCAW_03677 PF01272 Transcription elongation factor, GreA/GreB, C-term XCAW_03678 PF00923 Transaldolase/Fructose-6-phosphate aldolase XCAW_03680 PF01625 Peptide methionine sulfoxide reductase XCAW_03682 PF00196 Bacterial regulatory proteins, luxR family XCAW_03682 PF00072 Response regulator receiver domain XCAW_03683 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_03683 PF00512 His Kinase A (phospho-acceptor) domain XCAW_03683 PF00672 HAMP domain XCAW_03683 PF00072 Response regulator receiver domain XCAW_03683 PF01627 Hpt domain XCAW_03683 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) XCAW_03684 PF00990 Diguanylate cyclase, GGDEF domain XCAW_03684 PF00072 Response regulator receiver domain XCAW_03687 PF00749 tRNA synthetases class I (E and Q), catalytic domain XCAW_03687 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain XCAW_03688 PF00892 EamA-like transporter family XCAW_03691 PF01728 FtsJ-like methyltransferase XCAW_03691 PF18125 RlmM ferredoxin-like domain XCAW_03692 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XCAW_03692 PF02894 Oxidoreductase family, C-terminal alpha/beta domain XCAW_03693 PF08450 SMP-30/Gluconolactonase/LRE-like region XCAW_03697 PF00378 Enoyl-CoA hydratase/isomerase XCAW_03698 PF00171 Aldehyde dehydrogenase family XCAW_03699 PF00501 AMP-binding enzyme XCAW_03699 PF13193 AMP-binding enzyme C-terminal domain XCAW_03700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCAW_03700 PF03466 LysR substrate binding domain XCAW_03701 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit XCAW_03701 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase XCAW_03702 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase XCAW_03703 PF07729 FCD domain XCAW_03703 PF00392 Bacterial regulatory proteins, gntR family XCAW_03707 PF01494 FAD binding domain XCAW_03708 PF01494 FAD binding domain XCAW_03710 PF01923 Cobalamin adenosyltransferase XCAW_03711 PF00850 Histone deacetylase domain XCAW_03714 PF04453 LPS transport system D XCAW_03714 PF03968 OstA-like protein XCAW_03715 PF00639 PPIC-type PPIASE domain XCAW_03715 PF09312 SurA N-terminal domain XCAW_03716 PF04166 Pyridoxal phosphate biosynthetic protein PdxA XCAW_03717 PF00398 Ribosomal RNA adenine dimethylase XCAW_03718 PF04379 ApaG domain XCAW_03719 PF00149 Calcineurin-like phosphoesterase XCAW_03720 PF00005 ABC transporter XCAW_03720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region XCAW_03722 PF00528 Binding-protein-dependent transport system inner membrane component XCAW_03723 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle XCAW_03724 PF00296 Luciferase-like monooxygenase XCAW_03727 PF03358 NADPH-dependent FMN reductase XCAW_03728 PF00296 Luciferase-like monooxygenase XCAW_03731 PF00528 Binding-protein-dependent transport system inner membrane component XCAW_03732 PF00005 ABC transporter XCAW_03733 PF08028 Acyl-CoA dehydrogenase, C-terminal domain XCAW_03733 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XCAW_03734 PF00158 Sigma-54 interaction domain XCAW_03735 PF00186 Dihydrofolate reductase XCAW_03737 PF00303 Thymidylate synthase XCAW_03738 PF01790 Prolipoprotein diacylglyceryl transferase XCAW_03742 PF01219 Prokaryotic diacylglycerol kinase XCAW_03744 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_03744 PF00512 His Kinase A (phospho-acceptor) domain XCAW_03744 PF08521 Two-component sensor kinase N-terminal XCAW_03745 PF00072 Response regulator receiver domain XCAW_03745 PF00486 Transcriptional regulatory protein, C terminal XCAW_03746 PF13472 GDSL-like Lipase/Acylhydrolase family XCAW_03747 PF00005 ABC transporter XCAW_03749 PF02668 Taurine catabolism dioxygenase TauD, TfdA family XCAW_03751 PF00005 ABC transporter XCAW_03752 PF00528 Binding-protein-dependent transport system inner membrane component XCAW_03756 PF07715 TonB-dependent Receptor Plug Domain XCAW_03756 PF00593 TonB dependent receptor XCAW_03758 PF00248 Aldo/keto reductase family XCAW_03761 PF07670 Nucleoside recognition XCAW_03761 PF07662 Na+ dependent nucleoside transporter C-terminus XCAW_03761 PF01773 Na+ dependent nucleoside transporter N-terminus XCAW_03762 PF00294 pfkB family carbohydrate kinase XCAW_03764 PF01207 Dihydrouridine synthase (Dus) XCAW_03765 PF13649 Methyltransferase domain XCAW_03767 PF02773 S-adenosylmethionine synthetase, C-terminal domain XCAW_03767 PF02772 S-adenosylmethionine synthetase, central domain XCAW_03767 PF00438 S-adenosylmethionine synthetase, N-terminal domain XCAW_03768 PF00328 Histidine phosphatase superfamily (branch 2) XCAW_03774 PF00311 Phosphoenolpyruvate carboxylase XCAW_03776 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain XCAW_03776 PF05221 S-adenosyl-L-homocysteine hydrolase XCAW_03777 PF13649 Methyltransferase domain XCAW_03784 PF00128 Alpha amylase, catalytic domain XCAW_03785 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XCAW_03787 PF09286 Pro-kumamolisin, activation domain XCAW_03787 PF00082 Subtilase family XCAW_03788 PF00698 Acyl transferase domain XCAW_03788 PF14765 Polyketide synthase dehydratase XCAW_03788 PF00550 Phosphopantetheine attachment site XCAW_03788 PF08659 KR domain XCAW_03788 PF02801 Beta-ketoacyl synthase, C-terminal domain XCAW_03788 PF00109 Beta-ketoacyl synthase, N-terminal domain XCAW_03788 PF16197 Ketoacyl-synthetase C-terminal extension XCAW_03788 PF08240 Alcohol dehydrogenase GroES-like domain XCAW_03788 PF00107 Zinc-binding dehydrogenase XCAW_03790 PF02219 Methylenetetrahydrofolate reductase XCAW_03792 PF00293 NUDIX domain XCAW_03793 PF01043 SecA preprotein cross-linking domain XCAW_03793 PF07516 SecA Wing and Scaffold domain XCAW_03793 PF07517 SecA DEAD-like domain XCAW_03793 PF02810 SEC-C motif XCAW_03794 PF01476 LysM domain XCAW_03794 PF08525 Opacity-associated protein A N-terminal motif XCAW_03794 PF01551 Peptidase family M23 XCAW_03796 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase XCAW_03797 PF12327 FtsZ family, C-terminal domain XCAW_03797 PF00091 Tubulin/FtsZ family, GTPase domain XCAW_03798 PF02491 SHS2 domain inserted in FTSA XCAW_03799 PF08478 POTRA domain, FtsQ-type XCAW_03799 PF03799 Cell division protein FtsQ XCAW_03800 PF01820 D-ala D-ala ligase N-terminus XCAW_03800 PF07478 D-ala D-ala ligase C-terminus XCAW_03801 PF01225 Mur ligase family, catalytic domain XCAW_03801 PF08245 Mur ligase middle domain XCAW_03801 PF02875 Mur ligase family, glutamate ligase domain XCAW_03802 PF03033 Glycosyltransferase family 28 N-terminal domain XCAW_03802 PF04101 Glycosyltransferase family 28 C-terminal domain XCAW_03803 PF01098 Cell cycle protein XCAW_03804 PF00953 Glycosyl transferase family 4 XCAW_03805 PF02875 Mur ligase family, glutamate ligase domain XCAW_03805 PF01225 Mur ligase family, catalytic domain XCAW_03805 PF08245 Mur ligase middle domain XCAW_03806 PF08245 Mur ligase middle domain XCAW_03806 PF01225 Mur ligase family, catalytic domain XCAW_03806 PF02875 Mur ligase family, glutamate ligase domain XCAW_03807 PF03717 Penicillin-binding Protein dimerisation domain XCAW_03807 PF00905 Penicillin binding protein transpeptidase domain XCAW_03808 PF04999 Cell division protein FtsL XCAW_03809 PF01795 MraW methylase family XCAW_03810 PF02381 MraZ protein, putative antitoxin-like XCAW_03815 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XCAW_03817 PF02021 Uncharacterised protein family UPF0102 XCAW_03818 PF04307 LexA-binding, inner membrane-associated putative hydrolase XCAW_03819 PF02913 FAD linked oxidases, C-terminal domain XCAW_03819 PF01565 FAD binding domain XCAW_03822 PF00072 Response regulator receiver domain XCAW_03822 PF00486 Transcriptional regulatory protein, C terminal XCAW_03823 PF02702 Osmosensitive K+ channel His kinase sensor domain XCAW_03823 PF00512 His Kinase A (phospho-acceptor) domain XCAW_03823 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_03823 PF13492 GAF domain XCAW_03823 PF13493 Domain of unknown function (DUF4118) XCAW_03824 PF02669 K+-transporting ATPase, c chain XCAW_03826 PF03814 Potassium-transporting ATPase A subunit XCAW_03830 PF00586 AIR synthase related protein, N-terminal domain XCAW_03830 PF02769 AIR synthase related protein, C-terminal domain XCAW_03831 PF01029 NusB family XCAW_03832 PF00885 6,7-dimethyl-8-ribityllumazine synthase XCAW_03833 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase XCAW_03833 PF00925 GTP cyclohydrolase II XCAW_03834 PF00677 Lumazine binding domain XCAW_03836 PF01872 RibD C-terminal domain XCAW_03836 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region XCAW_03838 PF03477 ATP cone domain XCAW_03839 PF00464 Serine hydroxymethyltransferase XCAW_03841 PF12848 ABC transporter XCAW_03841 PF00005 ABC transporter XCAW_03843 PF00892 EamA-like transporter family XCAW_03844 PF02567 Phenazine biosynthesis-like protein XCAW_03845 PF00155 Aminotransferase class I and II XCAW_03845 PF00392 Bacterial regulatory proteins, gntR family XCAW_03846 PF00756 Putative esterase XCAW_03847 PF04828 Glutathione-dependent formaldehyde-activating enzyme XCAW_03848 PF08240 Alcohol dehydrogenase GroES-like domain XCAW_03848 PF00107 Zinc-binding dehydrogenase XCAW_03849 PF02583 Metal-sensitive transcriptional repressor XCAW_03852 PF00072 Response regulator receiver domain XCAW_03852 PF00486 Transcriptional regulatory protein, C terminal XCAW_03853 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_03853 PF00672 HAMP domain XCAW_03853 PF00512 His Kinase A (phospho-acceptor) domain XCAW_03854 PF04107 Glutamate-cysteine ligase family 2(GCS2) XCAW_03856 PF00753 Metallo-beta-lactamase superfamily XCAW_03856 PF10996 Beta-Casp domain XCAW_03856 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain XCAW_03857 PF01926 50S ribosome-binding GTPase XCAW_03858 PF00034 Cytochrome c XCAW_03860 PF01323 DSBA-like thioredoxin domain XCAW_03862 PF02028 BCCT, betaine/carnitine/choline family transporter XCAW_03863 PF00171 Aldehyde dehydrogenase family XCAW_03864 PF05199 GMC oxidoreductase XCAW_03864 PF00732 GMC oxidoreductase XCAW_03865 PF01966 HD domain XCAW_03865 PF01743 Poly A polymerase head domain XCAW_03865 PF12627 Probable RNA and SrmB- binding site of polymerase A XCAW_03867 PF01979 Amidohydrolase family XCAW_03868 PF01380 SIS domain XCAW_03869 PF00356 Bacterial regulatory proteins, lacI family XCAW_03870 PF07690 Major Facilitator Superfamily XCAW_03874 PF02837 Glycosyl hydrolases family 2, sugar binding domain XCAW_03874 PF02836 Glycosyl hydrolases family 2, TIM barrel domain XCAW_03874 PF00703 Glycosyl hydrolases family 2 XCAW_03874 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 XCAW_03874 PF16355 Domain of unknown function (DUF4982) XCAW_03879 PF03934 Type II secretion system (T2SS), protein K XCAW_03880 PF07963 Prokaryotic N-terminal methylation motif XCAW_03880 PF11612 Type II secretion system (T2SS), protein J XCAW_03881 PF02501 Type II secretion system (T2SS), protein I XCAW_03881 PF07963 Prokaryotic N-terminal methylation motif XCAW_03882 PF07963 Prokaryotic N-terminal methylation motif XCAW_03882 PF12019 Type II transport protein GspH XCAW_03883 PF08334 Type II secretion system (T2SS), protein G XCAW_03883 PF07963 Prokaryotic N-terminal methylation motif XCAW_03884 PF00482 Type II secretion system (T2SS), protein F XCAW_03885 PF00437 Type II/IV secretion system protein XCAW_03886 PF03958 Bacterial type II/III secretion system short domain XCAW_03886 PF00263 Bacterial type II and III secretion system protein XCAW_03895 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) XCAW_03896 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_03896 PF00512 His Kinase A (phospho-acceptor) domain XCAW_03897 PF00072 Response regulator receiver domain XCAW_03898 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_03898 PF00360 Phytochrome region XCAW_03898 PF08446 PAS fold XCAW_03898 PF00512 His Kinase A (phospho-acceptor) domain XCAW_03898 PF01590 GAF domain XCAW_03899 PF04972 BON domain XCAW_03900 PF02894 Oxidoreductase family, C-terminal alpha/beta domain XCAW_03900 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XCAW_03901 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase XCAW_03901 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain XCAW_03908 PF00293 NUDIX domain XCAW_03908 PF01467 Cytidylyltransferase-like XCAW_03910 PF03466 LysR substrate binding domain XCAW_03910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCAW_03912 PF11818 C-terminal domain of tail specific protease (DUF3340) XCAW_03912 PF17804 Tail specific protease N-terminal domain XCAW_03912 PF03572 Peptidase family S41 XCAW_03912 PF00595 PDZ domain XCAW_03913 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family XCAW_03913 PF04055 Radical SAM superfamily XCAW_03914 PF03099 Biotin/lipoate A/B protein ligase family XCAW_03915 PF04359 Protein of unknown function (DUF493) XCAW_03917 PF07943 Penicillin-binding protein 5, C-terminal domain XCAW_03917 PF00768 D-alanyl-D-alanine carboxypeptidase XCAW_03918 PF03330 Lytic transglycolase XCAW_03918 PF05036 Sporulation related domain XCAW_03919 PF13406 Transglycosylase SLT domain XCAW_03920 PF00295 Glycosyl hydrolases family 28 XCAW_03921 PF01098 Cell cycle protein XCAW_03922 PF03717 Penicillin-binding Protein dimerisation domain XCAW_03922 PF00905 Penicillin binding protein transpeptidase domain XCAW_03924 PF04085 rod shape-determining protein MreC XCAW_03926 PF00294 pfkB family carbohydrate kinase XCAW_03927 PF00158 Sigma-54 interaction domain XCAW_03927 PF02954 Bacterial regulatory protein, Fis family XCAW_03927 PF01590 GAF domain XCAW_03929 PF00107 Zinc-binding dehydrogenase XCAW_03929 PF08240 Alcohol dehydrogenase GroES-like domain XCAW_03932 PF00497 Bacterial extracellular solute-binding proteins, family 3 XCAW_03933 PF13360 PQQ-like domain XCAW_03936 PF01433 Peptidase family M1 domain XCAW_03936 PF11838 ERAP1-like C-terminal domain XCAW_03937 PF00990 Diguanylate cyclase, GGDEF domain XCAW_03937 PF00563 EAL domain XCAW_03937 PF03707 Bacterial signalling protein N terminal repeat XCAW_03938 PF01209 ubiE/COQ5 methyltransferase family XCAW_03940 PF13533 Biotin-lipoyl like XCAW_03941 PF13673 Acetyltransferase (GNAT) domain XCAW_03943 PF10431 C-terminal, D2-small domain, of ClpB protein XCAW_03943 PF07724 AAA domain (Cdc48 subfamily) XCAW_03943 PF00004 ATPase family associated with various cellular activities (AAA) XCAW_03944 PF00227 Proteasome subunit XCAW_03945 PF02899 Phage integrase, N-terminal SAM-like domain XCAW_03945 PF00589 Phage integrase family XCAW_03947 PF01678 Diaminopimelate epimerase XCAW_03949 PF04304 Protein of unknown function (DUF454) XCAW_03950 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain XCAW_03950 PF00326 Prolyl oligopeptidase family XCAW_03951 PF00155 Aminotransferase class I and II XCAW_03953 PF00326 Prolyl oligopeptidase family XCAW_03953 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain XCAW_03959 PF03900 Porphobilinogen deaminase, C-terminal domain XCAW_03959 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain XCAW_03960 PF00072 Response regulator receiver domain XCAW_03960 PF04397 LytTr DNA-binding domain XCAW_03961 PF07694 5TMR of 5TMR-LYT XCAW_03961 PF06580 Histidine kinase XCAW_03963 PF13632 Glycosyl transferase family group 2 XCAW_03967 PF00990 Diguanylate cyclase, GGDEF domain XCAW_03967 PF08448 PAS fold XCAW_03968 PF00916 Sulfate permease family XCAW_03968 PF01740 STAS domain XCAW_03969 PF00150 Cellulase (glycosyl hydrolase family 5) XCAW_03969 PF00553 Cellulose binding domain XCAW_03970 PF02203 Tar ligand binding domain homologue XCAW_03970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCAW_03970 PF00672 HAMP domain XCAW_03971 PF08447 PAS fold XCAW_03971 PF08448 PAS fold XCAW_03971 PF00563 EAL domain XCAW_03971 PF00990 Diguanylate cyclase, GGDEF domain XCAW_03975 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain XCAW_03975 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain XCAW_03977 PF01204 Trehalase XCAW_03979 PF01544 CorA-like Mg2+ transporter protein XCAW_03981 PF00324 Amino acid permease XCAW_03983 PF01695 IstB-like ATP binding protein XCAW_03984 PF00665 Integrase core domain XCAW_03984 PF02796 Helix-turn-helix domain of resolvase XCAW_03985 PF00497 Bacterial extracellular solute-binding proteins, family 3 XCAW_03986 PF00892 EamA-like transporter family XCAW_03992 PF00990 Diguanylate cyclase, GGDEF domain XCAW_03992 PF05230 MASE2 domain XCAW_03993 PF07759 Protein of unknown function (DUF1615) XCAW_03995 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region XCAW_03995 PF00326 Prolyl oligopeptidase family XCAW_03996 PF03176 MMPL family XCAW_03996 PF12823 Domain of unknown function (DUF3817) XCAW_04001 PF13409 Glutathione S-transferase, N-terminal domain XCAW_04006 PF04002 RadC-like JAB domain XCAW_04012 PF00072 Response regulator receiver domain XCAW_04012 PF13426 PAS domain XCAW_04012 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_04013 PF02796 Helix-turn-helix domain of resolvase XCAW_04013 PF00665 Integrase core domain XCAW_04014 PF01695 IstB-like ATP binding protein XCAW_04019 PF00873 AcrB/AcrD/AcrF family XCAW_04020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XCAW_04020 PF00529 HlyD membrane-fusion protein of T1SS XCAW_04021 PF00009 Elongation factor Tu GTP binding domain XCAW_04022 PF01507 Phosphoadenosine phosphosulfate reductase family XCAW_04023 PF00258 Flavodoxin XCAW_04023 PF00175 Oxidoreductase NAD-binding domain XCAW_04023 PF00667 FAD binding domain XCAW_04024 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain XCAW_04024 PF01077 Nitrite and sulphite reductase 4Fe-4S domain XCAW_04025 PF01507 Phosphoadenosine phosphosulfate reductase family XCAW_04029 PF00072 Response regulator receiver domain XCAW_04029 PF00512 His Kinase A (phospho-acceptor) domain XCAW_04029 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_04029 PF01627 Hpt domain XCAW_04032 PF03466 LysR substrate binding domain XCAW_04032 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCAW_04033 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XCAW_04033 PF14824 Sirohaem biosynthesis protein central XCAW_04033 PF10414 Sirohaem synthase dimerisation region XCAW_04034 PF00291 Pyridoxal-phosphate dependent enzyme XCAW_04036 PF01661 Macro domain XCAW_04037 PF00274 Fructose-bisphosphate aldolase class-I XCAW_04038 PF02887 Pyruvate kinase, alpha/beta domain XCAW_04038 PF00224 Pyruvate kinase, barrel domain XCAW_04040 PF00162 Phosphoglycerate kinase XCAW_04044 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain XCAW_04044 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain XCAW_04046 PF03922 OmpW family XCAW_04047 PF03922 OmpW family XCAW_04049 PF04273 Putative phosphatase (DUF442) XCAW_04049 PF00753 Metallo-beta-lactamase superfamily XCAW_04051 PF00528 Binding-protein-dependent transport system inner membrane component XCAW_04052 PF00005 ABC transporter XCAW_04052 PF03459 TOBE domain XCAW_04059 PF03734 L,D-transpeptidase catalytic domain XCAW_04059 PF01476 LysM domain XCAW_04060 PF04225 Opacity-associated protein A LysM-like domain XCAW_04060 PF01551 Peptidase family M23 XCAW_04062 PF07715 TonB-dependent Receptor Plug Domain XCAW_04062 PF00593 TonB dependent receptor XCAW_04063 PF12146 Serine aminopeptidase, S33 XCAW_04064 PF00456 Transketolase, thiamine diphosphate binding domain XCAW_04064 PF02780 Transketolase, C-terminal domain XCAW_04064 PF02779 Transketolase, pyrimidine binding domain XCAW_04065 PF00375 Sodium:dicarboxylate symporter family XCAW_04067 PF00092 von Willebrand factor type A domain XCAW_04067 PF07584 Aerotolerance regulator N-terminal XCAW_04071 PF07726 ATPase family associated with various cellular activities (AAA) XCAW_04071 PF17863 AAA lid domain XCAW_04073 PF00263 Bacterial type II and III secretion system protein XCAW_04073 PF11741 AMIN domain XCAW_04073 PF03958 Bacterial type II/III secretion system short domain XCAW_04073 PF07660 Secretin and TonB N terminus short domain XCAW_04078 PF00905 Penicillin binding protein transpeptidase domain XCAW_04078 PF17092 Penicillin-binding protein OB-like domain XCAW_04078 PF00912 Transglycosylase XCAW_04080 PF00285 Citrate synthase, C-terminal domain XCAW_04081 PF01197 Ribosomal protein L31 XCAW_04082 PF01156 Inosine-uridine preferring nucleoside hydrolase XCAW_04083 PF00270 DEAD/DEAH box helicase XCAW_04083 PF00271 Helicase conserved C-terminal domain XCAW_04083 PF17191 RecG wedge domain XCAW_04084 PF01042 Endoribonuclease L-PSP XCAW_04086 PF04607 Region found in RelA / SpoT proteins XCAW_04086 PF02824 TGS domain XCAW_04086 PF13291 ACT domain XCAW_04087 PF01192 RNA polymerase Rpb6 XCAW_04088 PF00625 Guanylate kinase XCAW_04089 PF03755 YicC-like family, N-terminal region XCAW_04089 PF08340 Domain of unknown function (DUF1732) XCAW_04090 PF03725 3' exoribonuclease family, domain 2 XCAW_04090 PF01138 3' exoribonuclease family, domain 1 XCAW_04092 PF01725 Ham1 family XCAW_04093 PF04055 Radical SAM superfamily XCAW_04093 PF06969 HemN C-terminal domain XCAW_04096 PF00557 Metallopeptidase family M24 XCAW_04098 PF00557 Metallopeptidase family M24 XCAW_04098 PF05195 Aminopeptidase P, N-terminal domain XCAW_04099 PF03695 Uncharacterised protein family (UPF0149) XCAW_04101 PF05164 Cell division protein ZapA XCAW_04102 PF01812 5-formyltetrahydrofolate cyclo-ligase family XCAW_04104 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) XCAW_04106 PF13369 Transglutaminase-like superfamily XCAW_04107 PF00301 Rubredoxin XCAW_04108 PF02581 Thiamine monophosphate synthase XCAW_04113 PF00202 Aminotransferase class-III XCAW_04114 PF17874 MalT-like TPR region XCAW_04114 PF00196 Bacterial regulatory proteins, luxR family XCAW_04115 PF00127 Copper binding proteins, plastocyanin/azurin family XCAW_04116 PF00155 Aminotransferase class I and II XCAW_04118 PF00034 Cytochrome c XCAW_04118 PF13442 Cytochrome C oxidase, cbb3-type, subunit III XCAW_04119 PF01593 Flavin containing amine oxidoreductase XCAW_04122 PF00202 Aminotransferase class-III XCAW_04123 PF00520 Ion transport protein XCAW_04123 PF00027 Cyclic nucleotide-binding domain XCAW_04126 PF01569 PAP2 superfamily XCAW_04127 PF01062 Bestrophin, RFP-TM, chloride channel XCAW_04129 PF02875 Mur ligase family, glutamate ligase domain XCAW_04129 PF01225 Mur ligase family, catalytic domain XCAW_04129 PF08245 Mur ligase middle domain XCAW_04132 PF00365 Phosphofructokinase XCAW_04134 PF03030 Inorganic H+ pyrophosphatase XCAW_04136 PF00719 Inorganic pyrophosphatase XCAW_04138 PF07715 TonB-dependent Receptor Plug Domain XCAW_04138 PF00593 TonB dependent receptor XCAW_04139 PF12833 Helix-turn-helix domain XCAW_04140 PF18500 CadC C-terminal domain 1 XCAW_04140 PF00486 Transcriptional regulatory protein, C terminal XCAW_04141 PF13667 ThiC-associated domain XCAW_04141 PF01964 Radical SAM ThiC family XCAW_04142 PF07715 TonB-dependent Receptor Plug Domain XCAW_04142 PF00593 TonB dependent receptor XCAW_04143 PF02203 Tar ligand binding domain homologue XCAW_04143 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCAW_04143 PF00672 HAMP domain XCAW_04145 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain XCAW_04145 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain XCAW_04146 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XCAW_04146 PF00205 Thiamine pyrophosphate enzyme, central domain XCAW_04146 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain XCAW_04148 PF00291 Pyridoxal-phosphate dependent enzyme XCAW_04149 PF08502 LeuA allosteric (dimerisation) domain XCAW_04149 PF00682 HMGL-like XCAW_04150 PF00180 Isocitrate/isopropylmalate dehydrogenase XCAW_04151 PF00694 Aconitase C-terminal domain XCAW_04152 PF00330 Aconitase family (aconitate hydratase) XCAW_04153 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCAW_04154 PF00990 Diguanylate cyclase, GGDEF domain XCAW_04154 PF17151 Periplasmic sensor domain XCAW_04157 PF02321 Outer membrane efflux protein XCAW_04158 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) XCAW_04159 PF03279 Bacterial lipid A biosynthesis acyltransferase XCAW_04165 PF01515 Phosphate acetyl/butaryl transferase XCAW_04165 PF03949 Malic enzyme, NAD binding domain XCAW_04165 PF00390 Malic enzyme, N-terminal domain XCAW_04166 PF00375 Sodium:dicarboxylate symporter family XCAW_04168 PF02743 Cache domain XCAW_04168 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_04168 PF00512 His Kinase A (phospho-acceptor) domain XCAW_04169 PF07690 Major Facilitator Superfamily XCAW_04171 PF03466 LysR substrate binding domain XCAW_04171 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCAW_04172 PF00248 Aldo/keto reductase family XCAW_04176 PF00196 Bacterial regulatory proteins, luxR family XCAW_04176 PF00072 Response regulator receiver domain XCAW_04178 PF00512 His Kinase A (phospho-acceptor) domain XCAW_04178 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_04178 PF08521 Two-component sensor kinase N-terminal XCAW_04179 PF00486 Transcriptional regulatory protein, C terminal XCAW_04179 PF00072 Response regulator receiver domain XCAW_04181 PF03600 Citrate transporter XCAW_04182 PF00106 short chain dehydrogenase XCAW_04183 PF00356 Bacterial regulatory proteins, lacI family XCAW_04187 PF00128 Alpha amylase, catalytic domain XCAW_04190 PF03193 RsgA GTPase XCAW_04195 PF07715 TonB-dependent Receptor Plug Domain XCAW_04195 PF00593 TonB dependent receptor XCAW_04196 PF01522 Polysaccharide deacetylase XCAW_04197 PF00462 Glutaredoxin XCAW_04200 PF01527 Transposase XCAW_04206 PF02645 Uncharacterised protein, DegV family COG1307 XCAW_04208 PF01327 Polypeptide deformylase XCAW_04209 PF03960 ArsC family XCAW_04212 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) XCAW_04213 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) XCAW_04214 PF01270 Glycosyl hydrolases family 8 XCAW_04215 PF03170 Bacterial cellulose synthase subunit XCAW_04216 PF00535 Glycosyl transferase family 2 XCAW_04216 PF07238 PilZ domain XCAW_04216 PF03552 Cellulose synthase XCAW_04219 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain XCAW_04219 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family XCAW_04226 PF00593 TonB dependent receptor XCAW_04226 PF07715 TonB-dependent Receptor Plug Domain XCAW_04228 PF00392 Bacterial regulatory proteins, gntR family XCAW_04228 PF07702 UTRA domain XCAW_04231 PF03958 Bacterial type II/III secretion system short domain XCAW_04231 PF00263 Bacterial type II and III secretion system protein XCAW_04233 PF10741 Type II secretion system (T2SS), protein M subtype b XCAW_04234 PF05137 Fimbrial assembly protein (PilN) XCAW_04235 PF03934 Type II secretion system (T2SS), protein K XCAW_04237 PF07963 Prokaryotic N-terminal methylation motif XCAW_04238 PF12019 Type II transport protein GspH XCAW_04239 PF08334 Type II secretion system (T2SS), protein G XCAW_04240 PF00482 Type II secretion system (T2SS), protein F XCAW_04241 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain XCAW_04241 PF00437 Type II/IV secretion system protein XCAW_04243 PF04151 Bacterial pre-peptidase C-terminal domain XCAW_04243 PF00082 Subtilase family XCAW_04244 PF05662 Coiled stalk of trimeric autotransporter adhesin XCAW_04244 PF05658 Head domain of trimeric autotransporter adhesin XCAW_04244 PF03895 YadA-like membrane anchor domain XCAW_04244 PF13018 Extended Signal Peptide of Type V secretion system XCAW_04245 PF04151 Bacterial pre-peptidase C-terminal domain XCAW_04245 PF00082 Subtilase family XCAW_04246 PF05662 Coiled stalk of trimeric autotransporter adhesin XCAW_04246 PF03895 YadA-like membrane anchor domain XCAW_04246 PF05658 Head domain of trimeric autotransporter adhesin XCAW_04246 PF13018 Extended Signal Peptide of Type V secretion system XCAW_04247 PF02769 AIR synthase related protein, C-terminal domain XCAW_04247 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal XCAW_04247 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain XCAW_04248 PF13098 Thioredoxin-like domain XCAW_04248 PF10411 Disulfide bond isomerase protein N-terminus XCAW_04250 PF00589 Phage integrase family XCAW_04250 PF02899 Phage integrase, N-terminal SAM-like domain XCAW_04253 PF03739 Lipopolysaccharide export system permease LptF/LptG XCAW_04255 PF02789 Cytosol aminopeptidase family, N-terminal domain XCAW_04255 PF00883 Cytosol aminopeptidase family, catalytic domain XCAW_04258 PF08264 Anticodon-binding domain of tRNA XCAW_04258 PF00133 tRNA synthetases class I (I, L, M and V) XCAW_04258 PF10458 Valyl tRNA synthetase tRNA binding arm XCAW_04259 PF00593 TonB dependent receptor XCAW_04259 PF07715 TonB-dependent Receptor Plug Domain XCAW_04261 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain XCAW_04261 PF01464 Transglycosylase SLT domain XCAW_04262 PF00544 Pectate lyase XCAW_04265 PF01066 CDP-alcohol phosphatidyltransferase XCAW_04267 PF03129 Anticodon binding domain XCAW_04267 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XCAW_04267 PF04073 Aminoacyl-tRNA editing domain XCAW_04268 PF00816 H-NS histone family XCAW_04270 PF02405 Permease MlaE XCAW_04271 PF00005 ABC transporter XCAW_04272 PF02470 MlaD protein XCAW_04272 PF03886 ABC-type transport auxiliary lipoprotein component XCAW_04276 PF14307 Glycosyltransferase WbsX XCAW_04276 PF05045 Rhamnan synthesis protein F XCAW_04277 PF01144 Coenzyme A transferase XCAW_04278 PF01144 Coenzyme A transferase XCAW_04279 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XCAW_04279 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XCAW_04279 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XCAW_04279 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XCAW_04280 PF00483 Nucleotidyl transferase XCAW_04280 PF01050 Mannose-6-phosphate isomerase XCAW_04281 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain XCAW_04281 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain XCAW_04281 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain XCAW_04282 PF04321 RmlD substrate binding domain XCAW_04283 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase XCAW_04284 PF00483 Nucleotidyl transferase XCAW_04285 PF16363 GDP-mannose 4,6 dehydratase XCAW_04286 PF01012 Electron transfer flavoprotein domain XCAW_04287 PF01012 Electron transfer flavoprotein domain XCAW_04287 PF00766 Electron transfer flavoprotein FAD-binding domain XCAW_04289 PF01040 UbiA prenyltransferase family XCAW_04290 PF01565 FAD binding domain XCAW_04290 PF04030 D-arabinono-1,4-lactone oxidase XCAW_04291 PF00106 short chain dehydrogenase XCAW_04293 PF01370 NAD dependent epimerase/dehydratase family XCAW_04294 PF00724 NADH:flavin oxidoreductase / NADH oxidase family XCAW_04294 PF07992 Pyridine nucleotide-disulphide oxidoreductase XCAW_04297 PF01209 ubiE/COQ5 methyltransferase family XCAW_04299 PF14307 Glycosyltransferase WbsX XCAW_04299 PF05045 Rhamnan synthesis protein F XCAW_04301 PF00535 Glycosyl transferase family 2 XCAW_04302 PF00005 ABC transporter XCAW_04304 PF01053 Cys/Met metabolism PLP-dependent enzyme XCAW_04305 PF00571 CBS domain XCAW_04305 PF00291 Pyridoxal-phosphate dependent enzyme XCAW_04309 PF00437 Type II/IV secretion system protein XCAW_04311 PF14497 Glutathione S-transferase, C-terminal domain XCAW_04311 PF02798 Glutathione S-transferase, N-terminal domain XCAW_04313 PF00271 Helicase conserved C-terminal domain XCAW_04313 PF00270 DEAD/DEAH box helicase XCAW_04315 PF00593 TonB dependent receptor XCAW_04315 PF07715 TonB-dependent Receptor Plug Domain XCAW_04316 PF01242 6-pyruvoyl tetrahydropterin synthase XCAW_04319 PF13185 GAF domain XCAW_04321 PF00756 Putative esterase XCAW_04322 PF00593 TonB dependent receptor XCAW_04322 PF07715 TonB-dependent Receptor Plug Domain XCAW_04323 PF13419 Haloacid dehalogenase-like hydrolase XCAW_04324 PF00817 impB/mucB/samB family XCAW_04324 PF11799 impB/mucB/samB family C-terminal domain XCAW_04325 PF07977 FabA-like domain XCAW_04326 PF00109 Beta-ketoacyl synthase, N-terminal domain XCAW_04326 PF02801 Beta-ketoacyl synthase, C-terminal domain XCAW_04328 PF01432 Peptidase family M3 XCAW_04331 PF07732 Multicopper oxidase XCAW_04331 PF00394 Multicopper oxidase XCAW_04331 PF07731 Multicopper oxidase XCAW_04332 PF05275 Copper resistance protein B precursor (CopB) XCAW_04333 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XCAW_04338 PF01380 SIS domain XCAW_04339 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XCAW_04340 PF00005 ABC transporter XCAW_04340 PF02687 FtsX-like permease family XCAW_04340 PF12704 MacB-like periplasmic core domain XCAW_04341 PF02687 FtsX-like permease family XCAW_04341 PF12704 MacB-like periplasmic core domain XCAW_04342 PF02687 FtsX-like permease family XCAW_04342 PF12704 MacB-like periplasmic core domain XCAW_04344 PF00072 Response regulator receiver domain XCAW_04344 PF00158 Sigma-54 interaction domain XCAW_04344 PF02954 Bacterial regulatory protein, Fis family XCAW_04345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_04345 PF00512 His Kinase A (phospho-acceptor) domain XCAW_04346 PF14602 Hexapeptide repeat of succinyl-transferase XCAW_04346 PF00132 Bacterial transferase hexapeptide (six repeats) XCAW_04346 PF12804 MobA-like NTP transferase domain XCAW_04349 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain XCAW_04349 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain XCAW_04350 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XCAW_04350 PF02874 ATP synthase alpha/beta family, beta-barrel domain XCAW_04352 PF00231 ATP synthase XCAW_04353 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XCAW_04353 PF00306 ATP synthase alpha/beta chain, C terminal domain XCAW_04353 PF02874 ATP synthase alpha/beta family, beta-barrel domain XCAW_04354 PF00213 ATP synthase delta (OSCP) subunit XCAW_04355 PF00430 ATP synthase B/B' CF(0) XCAW_04356 PF00137 ATP synthase subunit C XCAW_04357 PF00119 ATP synthase A chain XCAW_04361 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XCAW_04361 PF07992 Pyridine nucleotide-disulphide oxidoreductase XCAW_04370 PF03180 NLPA lipoprotein XCAW_04371 PF00528 Binding-protein-dependent transport system inner membrane component XCAW_04372 PF09383 NIL domain XCAW_04372 PF00005 ABC transporter XCAW_04373 PF00892 EamA-like transporter family XCAW_04374 PF04461 Protein of unknown function (DUF520) XCAW_04376 PF00072 Response regulator receiver domain XCAW_04376 PF01627 Hpt domain XCAW_04376 PF00989 PAS fold XCAW_04376 PF00512 His Kinase A (phospho-acceptor) domain XCAW_04376 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_04376 PF18415 Histidine kinase receptor ArcB trans-membrane domain XCAW_04381 PF13419 Haloacid dehalogenase-like hydrolase XCAW_04382 PF00849 RNA pseudouridylate synthase XCAW_04382 PF01479 S4 domain XCAW_04383 PF05175 Methyltransferase small domain XCAW_04383 PF08468 Methyltransferase small domain N-terminal XCAW_04385 PF07995 Glucose / Sorbosone dehydrogenase XCAW_04387 PF00512 His Kinase A (phospho-acceptor) domain XCAW_04387 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_04387 PF00989 PAS fold XCAW_04391 PF01168 Alanine racemase, N-terminal domain XCAW_04391 PF00842 Alanine racemase, C-terminal domain XCAW_04392 PF01266 FAD dependent oxidoreductase XCAW_04393 PF01037 Lrp/AsnC ligand binding domain XCAW_04395 PF01641 SelR domain XCAW_04397 PF01618 MotA/TolQ/ExbB proton channel family XCAW_04398 PF00691 OmpA family XCAW_04398 PF13677 Membrane MotB of proton-channel complex MotA/MotB XCAW_04403 PF01061 ABC-2 type transporter XCAW_04404 PF00005 ABC transporter XCAW_04405 PF00999 Sodium/hydrogen exchanger family XCAW_04406 PF02469 Fasciclin domain XCAW_04407 PF03167 Uracil DNA glycosylase superfamily XCAW_04410 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase XCAW_04412 PF03466 LysR substrate binding domain XCAW_04412 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCAW_04413 PF03358 NADPH-dependent FMN reductase XCAW_04414 PF00248 Aldo/keto reductase family XCAW_04416 PF05649 Peptidase family M13 XCAW_04416 PF01431 Peptidase family M13 XCAW_04420 PF13520 Amino acid permease XCAW_04422 PF00072 Response regulator receiver domain XCAW_04422 PF04397 LytTr DNA-binding domain XCAW_04423 PF06580 Histidine kinase XCAW_04423 PF02743 Cache domain XCAW_04423 PF00672 HAMP domain XCAW_04423 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCAW_04426 PF05974 Domain of unknown function (DUF892) XCAW_04427 PF05067 Manganese containing catalase XCAW_04431 PF08448 PAS fold XCAW_04431 PF03705 CheR methyltransferase, all-alpha domain XCAW_04431 PF01339 CheB methylesterase XCAW_04431 PF01739 CheR methyltransferase, SAM binding domain XCAW_04434 PF02954 Bacterial regulatory protein, Fis family XCAW_04434 PF00072 Response regulator receiver domain XCAW_04434 PF00158 Sigma-54 interaction domain XCAW_04436 PF01654 Cytochrome bd terminal oxidase subunit I XCAW_04437 PF02322 Cytochrome bd terminal oxidase subunit II XCAW_04441 PF16363 GDP-mannose 4,6 dehydratase XCAW_04443 PF03275 UDP-galactopyranose mutase XCAW_04445 PF00005 ABC transporter XCAW_04445 PF00664 ABC transporter transmembrane region XCAW_04448 PF08240 Alcohol dehydrogenase GroES-like domain XCAW_04448 PF00107 Zinc-binding dehydrogenase XCAW_04448 PF13823 Alcohol dehydrogenase GroES-associated XCAW_04457 PF00593 TonB dependent receptor XCAW_04457 PF07715 TonB-dependent Receptor Plug Domain XCAW_04460 PF00005 ABC transporter XCAW_04462 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCAW_04462 PF03466 LysR substrate binding domain XCAW_04463 PF01042 Endoribonuclease L-PSP XCAW_04466 PF00672 HAMP domain XCAW_04466 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCAW_04466 PF02203 Tar ligand binding domain homologue XCAW_04469 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCAW_04469 PF03466 LysR substrate binding domain XCAW_04470 PF02525 Flavodoxin-like fold XCAW_04479 PF00557 Metallopeptidase family M24 XCAW_04482 PF01695 IstB-like ATP binding protein XCAW_04483 PF00665 Integrase core domain XCAW_04483 PF02796 Helix-turn-helix domain of resolvase XCAW_04484 PF03358 NADPH-dependent FMN reductase XCAW_04485 PF01527 Transposase XCAW_04486 PF00665 Integrase core domain XCAW_04486 PF13276 HTH-like domain XCAW_04486 PF13333 Integrase core domain XCAW_04491 PF00717 Peptidase S24-like XCAW_04492 PF11799 impB/mucB/samB family C-terminal domain XCAW_04492 PF13438 Domain of unknown function (DUF4113) XCAW_04492 PF00817 impB/mucB/samB family XCAW_04492 PF11798 IMS family HHH motif XCAW_04499 PF01555 DNA methylase XCAW_04509 PF00182 Chitinase class I XCAW_04535 PF01695 IstB-like ATP binding protein XCAW_04536 PF02796 Helix-turn-helix domain of resolvase XCAW_04536 PF00665 Integrase core domain XCAW_04548 PF04545 Sigma-70, region 4 XCAW_04548 PF04539 Sigma-70 region 3 XCAW_04548 PF04542 Sigma-70 region 2 XCAW_04548 PF00140 Sigma-70 factor, region 1.2 XCAW_04548 PF03979 Sigma-70 factor, region 1.1 XCAW_04548 PF04546 Sigma-70, non-essential region XCAW_04549 PF02580 D-Tyr-tRNA(Tyr) deacylase XCAW_04550 PF03279 Bacterial lipid A biosynthesis acyltransferase XCAW_04552 PF00925 GTP cyclohydrolase II XCAW_04556 PF00535 Glycosyl transferase family 2 XCAW_04559 PF01029 NusB family XCAW_04559 PF01189 16S rRNA methyltransferase RsmB/F XCAW_04560 PF02911 Formyl transferase, C-terminal domain XCAW_04560 PF00551 Formyl transferase XCAW_04561 PF01327 Polypeptide deformylase XCAW_04562 PF01476 LysM domain XCAW_04563 PF02481 DNA recombination-mediator protein A XCAW_04563 PF17782 DprA winged helix domain XCAW_04564 PF04361 Protein of unknown function (DUF494) XCAW_04565 PF07963 Prokaryotic N-terminal methylation motif XCAW_04565 PF00114 Pilin (bacterial filament) XCAW_04567 PF13368 Topoisomerase C-terminal repeat XCAW_04567 PF01131 DNA topoisomerase XCAW_04567 PF01751 Toprim domain XCAW_04568 PF01300 Telomere recombination XCAW_04573 PF01343 Peptidase family S49 XCAW_04574 PF01554 MatE XCAW_04578 PF18074 Primosomal protein N C-terminal domain XCAW_04578 PF00270 DEAD/DEAH box helicase XCAW_04578 PF00271 Helicase conserved C-terminal domain XCAW_04578 PF17764 3′ DNA-binding domain (3′BD) XCAW_04578 PF18319 PriA DNA helicase Cys-rich region (CRR) domain XCAW_04579 PF00043 Glutathione S-transferase, C-terminal domain XCAW_04579 PF13417 Glutathione S-transferase, N-terminal domain XCAW_04582 PF07992 Pyridine nucleotide-disulphide oxidoreductase XCAW_04583 PF03458 UPF0126 domain XCAW_04584 PF04545 Sigma-70, region 4 XCAW_04584 PF04542 Sigma-70 region 2 XCAW_04585 PF03167 Uracil DNA glycosylase superfamily XCAW_04586 PF01339 CheB methylesterase XCAW_04586 PF00072 Response regulator receiver domain XCAW_04587 PF18075 FtsX extracellular domain XCAW_04588 PF00005 ABC transporter XCAW_04589 PF00270 DEAD/DEAH box helicase XCAW_04589 PF00271 Helicase conserved C-terminal domain XCAW_04589 PF12300 ATP-dependent RNA helicase RhlB XCAW_04590 PF00085 Thioredoxin XCAW_04591 PF07497 Rho termination factor, RNA-binding domain XCAW_04591 PF07498 Rho termination factor, N-terminal domain XCAW_04591 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XCAW_04592 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) XCAW_04593 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCAW_04593 PF03466 LysR substrate binding domain XCAW_04595 PF03971 Monomeric isocitrate dehydrogenase XCAW_04598 PF09704 CRISPR-associated protein (Cas_Cas5) XCAW_04599 PF09704 CRISPR-associated protein (Cas_Cas5) XCAW_04603 PF01867 CRISPR associated protein Cas1 XCAW_04604 PF00665 Integrase core domain XCAW_04604 PF02796 Helix-turn-helix domain of resolvase XCAW_04605 PF01695 IstB-like ATP binding protein XCAW_04607 PF04972 BON domain XCAW_04607 PF01476 LysM domain XCAW_04608 PF14489 QueF-like protein XCAW_04608 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term XCAW_04609 PF07687 Peptidase dimerisation domain XCAW_04609 PF01546 Peptidase family M20/M25/M40 XCAW_04610 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XCAW_04611 PF00873 AcrB/AcrD/AcrF family XCAW_04612 PF00873 AcrB/AcrD/AcrF family XCAW_04613 PF07063 Domain of unknown function (DUF1338) XCAW_04621 PF01427 D-ala-D-ala dipeptidase XCAW_04622 PF01510 N-acetylmuramoyl-L-alanine amidase XCAW_04624 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain XCAW_04624 PF13378 Enolase C-terminal domain-like XCAW_04626 PF13520 Amino acid permease XCAW_04629 PF05360 yiaA/B two helix domain XCAW_04630 PF07995 Glucose / Sorbosone dehydrogenase XCAW_04631 PF00933 Glycosyl hydrolase family 3 N terminal domain XCAW_04631 PF14310 Fibronectin type III-like domain XCAW_04631 PF01915 Glycosyl hydrolase family 3 C-terminal domain XCAW_04632 PF02152 Dihydroneopterin aldolase XCAW_04633 PF00814 Glycoprotease family XCAW_04634 PF01165 Ribosomal protein S21 XCAW_04635 PF09424 Yqey-like protein XCAW_04636 PF03631 Virulence factor BrkB XCAW_04637 PF01807 CHC2 zinc finger XCAW_04637 PF10410 DnaB-helicase binding domain of primase XCAW_04637 PF08278 DNA primase DnaG DnaB-binding XCAW_04637 PF08275 DNA primase catalytic core, N-terminal domain XCAW_04638 PF13593 SBF-like CPA transporter family (DUF4137) XCAW_04640 PF01040 UbiA prenyltransferase family XCAW_04645 PF00510 Cytochrome c oxidase subunit III XCAW_04646 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 XCAW_04648 PF00115 Cytochrome C and Quinol oxidase polypeptide I XCAW_04649 PF02790 Cytochrome C oxidase subunit II, transmembrane domain XCAW_04649 PF00116 Cytochrome C oxidase subunit II, periplasmic domain XCAW_04651 PF01619 Proline dehydrogenase XCAW_04651 PF18327 Proline utilization A proline dehydrogenase N-terminal domain XCAW_04651 PF00171 Aldehyde dehydrogenase family XCAW_04651 PF14850 DNA-binding domain of Proline dehydrogenase XCAW_04658 PF03594 Benzoate membrane transport protein XCAW_04659 PF00360 Phytochrome region XCAW_04659 PF13426 PAS domain XCAW_04659 PF08446 PAS fold XCAW_04659 PF01590 GAF domain XCAW_04660 PF01126 Heme oxygenase XCAW_04661 PF07690 Major Facilitator Superfamily XCAW_04662 PF01263 Aldose 1-epimerase XCAW_04664 PF02810 SEC-C motif XCAW_04665 PF01925 Sulfite exporter TauE/SafE XCAW_04670 PF01227 GTP cyclohydrolase I XCAW_04672 PF07869 Protein of unknown function (DUF1656) XCAW_04673 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XCAW_04673 PF00529 HlyD membrane-fusion protein of T1SS XCAW_04674 PF02321 Outer membrane efflux protein XCAW_04676 PF04632 Fusaric acid resistance protein family XCAW_04677 PF00083 Sugar (and other) transporter XCAW_04678 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family XCAW_04679 PF13091 PLD-like domain XCAW_04679 PF13396 Phospholipase_D-nuclease N-terminal XCAW_04684 PF01850 PIN domain XCAW_04691 PF00849 RNA pseudouridylate synthase XCAW_04693 PF01527 Transposase XCAW_04694 PF13276 HTH-like domain XCAW_04694 PF00665 Integrase core domain XCAW_04694 PF13333 Integrase core domain XCAW_04698 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XCAW_04698 PF02785 Biotin carboxylase C-terminal domain XCAW_04698 PF00289 Biotin carboxylase, N-terminal domain XCAW_04699 PF01425 Amidase XCAW_04707 PF13538 UvrD-like helicase C-terminal domain XCAW_04708 PF13361 UvrD-like helicase C-terminal domain XCAW_04708 PF00580 UvrD/REP helicase N-terminal domain XCAW_04708 PF12705 PD-(D/E)XK nuclease superfamily XCAW_04709 PF17946 RecC C-terminal domain XCAW_04711 PF00005 ABC transporter XCAW_04712 PF02405 Permease MlaE XCAW_04713 PF02470 MlaD protein XCAW_04714 PF05494 MlaC protein XCAW_04716 PF04333 MlaA lipoprotein XCAW_04718 PF00255 Glutathione peroxidase XCAW_04720 PF02646 RmuC family XCAW_04721 PF08240 Alcohol dehydrogenase GroES-like domain XCAW_04721 PF00107 Zinc-binding dehydrogenase XCAW_04722 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCAW_04722 PF03466 LysR substrate binding domain XCAW_04724 PF13417 Glutathione S-transferase, N-terminal domain XCAW_04724 PF00043 Glutathione S-transferase, C-terminal domain XCAW_04726 PF13520 Amino acid permease XCAW_04727 PF07971 Glycosyl hydrolase family 92 XCAW_04727 PF17678 Glycosyl hydrolase family 92 N-terminal domain XCAW_04729 PF10947 Protein of unknown function (DUF2628) XCAW_04730 PF00990 Diguanylate cyclase, GGDEF domain XCAW_04731 PF13556 PucR C-terminal helix-turn-helix domain XCAW_04731 PF17853 GGDEF-like domain XCAW_04731 PF05651 Putative sugar diacid recognition XCAW_04732 PF02595 Glycerate kinase family XCAW_04733 PF07690 Major Facilitator Superfamily XCAW_04736 PF17785 PUA-like domain XCAW_04736 PF10672 S-adenosylmethionine-dependent methyltransferase XCAW_04737 PF03741 Integral membrane protein TerC family XCAW_04738 PF01694 Rhomboid family XCAW_04739 PF03009 Glycerophosphoryl diester phosphodiesterase family XCAW_04741 PF01569 PAP2 superfamily XCAW_04742 PF10396 GTP-binding protein TrmE N-terminus XCAW_04742 PF12631 MnmE helical domain XCAW_04742 PF01926 50S ribosome-binding GTPase XCAW_04743 PF01522 Polysaccharide deacetylase XCAW_04744 PF02096 60Kd inner membrane protein XCAW_04744 PF14849 YidC periplasmic domain XCAW_04745 PF00825 Ribonuclease P XCAW_04746 PF00468 Ribosomal protein L34 XCAW_a00005 PF00239 Resolvase, N terminal domain XCAW_a00005 PF02796 Helix-turn-helix domain of resolvase XCAW_a00007 PF02384 N-6 DNA Methylase XCAW_a00008 PF07669 Eco57I restriction-modification methylase XCAW_a00010 PF03389 MobA/MobL family XCAW_a00010 PF17841 BID domain of Bartonella effector protein (Bep) XCAW_a00010 PF01443 Viral (Superfamily 1) RNA helicase XCAW_a00013 PF02534 Type IV secretory system Conjugative DNA transfer XCAW_a00016 PF01850 PIN domain XCAW_b00001 PF00239 Resolvase, N terminal domain XCAW_b00001 PF02796 Helix-turn-helix domain of resolvase XCAW_b00007 PF01527 Transposase XCAW_b00010 PF13700 Domain of unknown function (DUF4158) XCAW_b00010 PF01526 Tn3 transposase DDE domain XCAW_b00012 PF00239 Resolvase, N terminal domain XCAW_b00012 PF02796 Helix-turn-helix domain of resolvase XCAW_b00018 PF03377 TAL effector repeat XCAW_b00019 PF02796 Helix-turn-helix domain of resolvase XCAW_b00019 PF00239 Resolvase, N terminal domain XCAW_b00022 PF13700 Domain of unknown function (DUF4158) XCAW_b00022 PF01526 Tn3 transposase DDE domain XCAW_b00024 PF01527 Transposase XCAW_b00026 PF03377 TAL effector repeat XCAW_b00029 PF00665 Integrase core domain XCAW_b00029 PF13333 Integrase core domain XCAW_b00029 PF13276 HTH-like domain XCAW_b00030 PF00239 Resolvase, N terminal domain XCAW_b00030 PF02796 Helix-turn-helix domain of resolvase XCAW_b00037 PF13614 AAA domain XCAW_b00038 PF08535 KorB domain XCAW_b00038 PF02195 ParB-like nuclease domain XCAW_b00038 PF06613 KorB C-terminal beta-barrel domain XCAW_b00041 PF01527 Transposase XCAW_b00045 PF01695 IstB-like ATP binding protein XCAW_b00046 PF00665 Integrase core domain XCAW_b00046 PF02796 Helix-turn-helix domain of resolvase XCAW_b00058 PF01580 FtsK/SpoIIIE family XCAW_b00058 PF09397 Ftsk gamma domain XCAW_b00058 PF17854 FtsK alpha domain XCAW_b00058 PF13491 4TM region of DNA translocase FtsK/SpoIIIE XCAW_b00060 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain XCAW_b00066 PF02810 SEC-C motif XCAW_b00066 PF03695 Uncharacterised protein family (UPF0149) XCAW_b00067 PF01526 Tn3 transposase DDE domain XCAW_b00067 PF13700 Domain of unknown function (DUF4158)