locus-tag class description J158_00004 PF01527 Transposase J158_00006 PF00239 Resolvase, N terminal domain J158_00006 PF02796 Helix-turn-helix domain of resolvase J158_00019 PF07015 VirC1 protein J158_00023 PF03377 TAL effector repeat J158_00027 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system J158_00029 PF00239 Resolvase, N terminal domain J158_00029 PF02796 Helix-turn-helix domain of resolvase J158_00033 PF01526 Tn3 transposase DDE domain J158_00033 PF13700 Domain of unknown function (DUF4158) J158_00036 PF00239 Resolvase, N terminal domain J158_00036 PF02796 Helix-turn-helix domain of resolvase J158_00037 PF03377 TAL effector repeat J158_00041 PF13614 AAA domain J158_00049 PF13406 Transglycosylase SLT domain J158_00050 PF01526 Tn3 transposase DDE domain J158_00050 PF13700 Domain of unknown function (DUF4158) J158_00055 PF01527 Transposase J158_00056 PF03377 TAL effector repeat J158_00060 PF07015 VirC1 protein J158_00073 PF07057 DNA helicase TraI J158_00073 PF18272 single-stranded DNA binding TraI N-terminal subdomain J158_00073 PF18340 DNA relaxase TraI 2B/2B-like domain J158_00073 PF18340 DNA relaxase TraI 2B/2B-like domain J158_00073 PF07057 DNA helicase TraI J158_00073 PF18272 single-stranded DNA binding TraI N-terminal subdomain J158_00073 PF08751 TrwC relaxase J158_00073 PF08751 TrwC relaxase J158_00078 PF01464 Transglycosylase SLT domain J158_00079 PF00437 Type II/IV secretion system protein J158_00080 PF03743 Bacterial conjugation TrbI-like protein J158_00081 PF03524 Conjugal transfer protein J158_00093 PF01527 Transposase J158_00096 PF08535 KorB domain J158_00096 PF02195 ParB-like nuclease domain J158_00096 PF06613 KorB C-terminal beta-barrel domain J158_00097 PF13614 AAA domain J158_00102 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin J158_00103 PF02796 Helix-turn-helix domain of resolvase J158_00103 PF00239 Resolvase, N terminal domain J158_00104 PF13333 Integrase core domain J158_00104 PF00665 Integrase core domain J158_00104 PF13276 HTH-like domain J158_00105 PF00665 Integrase core domain J158_00105 PF13276 HTH-like domain J158_00105 PF13333 Integrase core domain J158_00106 PF03377 TAL effector repeat J158_00107 PF01526 Tn3 transposase DDE domain J158_00107 PF13700 Domain of unknown function (DUF4158) J158_00110 PF00239 Resolvase, N terminal domain J158_00110 PF02796 Helix-turn-helix domain of resolvase J158_00111 PF08299 Bacterial dnaA protein helix-turn-helix J158_00111 PF00308 Bacterial dnaA protein J158_00111 PF11638 DnaA N-terminal domain J158_00112 PF02767 DNA polymerase III beta subunit, central domain J158_00112 PF00712 DNA polymerase III beta subunit, N-terminal domain J158_00112 PF02768 DNA polymerase III beta subunit, C-terminal domain J158_00113 PF02463 RecF/RecN/SMC N terminal domain J158_00115 PF01751 Toprim domain J158_00115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_00115 PF00986 DNA gyrase B subunit, carboxyl terminus J158_00115 PF00204 DNA gyrase B J158_00115 PF18053 DNA gyrase B subunit insert domain J158_00117 PF01435 Peptidase family M48 J158_00119 PF03544 Gram-negative bacterial TonB protein C-terminal J158_00120 PF01618 MotA/TolQ/ExbB proton channel family J158_00121 PF02472 Biopolymer transport protein ExbD/TolR J158_00122 PF02472 Biopolymer transport protein ExbD/TolR J158_00123 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ J158_00125 PF13091 PLD-like domain J158_00125 PF13396 Phospholipase_D-nuclease N-terminal J158_00128 PF04055 Radical SAM superfamily J158_00130 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) J158_00133 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J158_00133 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J158_00134 PF03572 Peptidase family S41 J158_00134 PF13180 PDZ domain J158_00135 PF01551 Peptidase family M23 J158_00137 PF04389 Peptidase family M28 J158_00139 PF00150 Cellulase (glycosyl hydrolase family 5) J158_00140 PF00150 Cellulase (glycosyl hydrolase family 5) J158_00141 PF00150 Cellulase (glycosyl hydrolase family 5) J158_00142 PF08240 Alcohol dehydrogenase GroES-like domain J158_00142 PF00107 Zinc-binding dehydrogenase J158_00143 PF07992 Pyridine nucleotide-disulphide oxidoreductase J158_00143 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J158_00144 PF00310 Glutamine amidotransferases class-II J158_00144 PF01645 Conserved region in glutamate synthase J158_00144 PF01493 GXGXG motif J158_00144 PF04898 Glutamate synthase central domain J158_00148 PF01804 Penicillin amidase J158_00150 PF03466 LysR substrate binding domain J158_00150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J158_00153 PF02397 Bacterial sugar transferase J158_00154 PF02350 UDP-N-acetylglucosamine 2-epimerase J158_00156 PF03808 Glycosyl transferase WecB/TagA/CpsF family J158_00157 PF13439 Glycosyltransferase Family 4 J158_00157 PF00534 Glycosyl transferases group 1 J158_00161 PF13537 Glutamine amidotransferase domain J158_00161 PF00733 Asparagine synthase J158_00164 PF16363 GDP-mannose 4,6 dehydratase J158_00167 PF00005 ABC transporter J158_00167 PF00664 ABC transporter transmembrane region J158_00169 PF13537 Glutamine amidotransferase domain J158_00169 PF00733 Asparagine synthase J158_00174 PF00685 Sulfotransferase domain J158_00191 PF00271 Helicase conserved C-terminal domain J158_00191 PF00270 DEAD/DEAH box helicase J158_00191 PF09369 Domain of unknown function (DUF1998) J158_00192 PF03006 Haemolysin-III related J158_00195 PF00106 short chain dehydrogenase J158_00197 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J158_00197 PF03466 LysR substrate binding domain J158_00201 PF02525 Flavodoxin-like fold J158_00203 PF01527 Transposase J158_00204 PF13276 HTH-like domain J158_00204 PF00665 Integrase core domain J158_00204 PF13333 Integrase core domain J158_00212 PF05532 CsbD-like J158_00216 PF16485 Protealysin propeptide J158_00216 PF02868 Thermolysin metallopeptidase, alpha-helical domain J158_00216 PF01447 Thermolysin metallopeptidase, catalytic domain J158_00218 PF00293 NUDIX domain J158_00218 PF13344 Haloacid dehalogenase-like hydrolase J158_00221 PF00085 Thioredoxin J158_00222 PF08946 Osmosensory transporter coiled coil J158_00222 PF00083 Sugar (and other) transporter J158_00230 PF07726 ATPase family associated with various cellular activities (AAA) J158_00230 PF17863 AAA lid domain J158_00236 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain J158_00237 PF00155 Aminotransferase class I and II J158_00238 PF07715 TonB-dependent Receptor Plug Domain J158_00238 PF00593 TonB dependent receptor J158_00240 PF07883 Cupin domain J158_00241 PF00171 Aldehyde dehydrogenase family J158_00245 PF02735 Ku70/Ku80 beta-barrel domain J158_00246 PF01070 FMN-dependent dehydrogenase J158_00247 PF00144 Beta-lactamase J158_00248 PF07730 Histidine kinase J158_00249 PF00072 Response regulator receiver domain J158_00249 PF00196 Bacterial regulatory proteins, luxR family J158_00253 PF18500 CadC C-terminal domain 1 J158_00253 PF00486 Transcriptional regulatory protein, C terminal J158_00254 PF07055 Enoyl reductase FAD binding domain J158_00254 PF12241 Trans-2-enoyl-CoA reductase catalytic region J158_00254 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase J158_00256 PF00294 pfkB family carbohydrate kinase J158_00267 PF01527 Transposase J158_00268 PF13333 Integrase core domain J158_00268 PF00665 Integrase core domain J158_00268 PF13276 HTH-like domain J158_00269 PF00128 Alpha amylase, catalytic domain J158_00269 PF11896 Domain of unknown function (DUF3416) J158_00270 PF16657 Maltogenic Amylase, C-terminal domain J158_00270 PF00128 Alpha amylase, catalytic domain J158_00271 PF00128 Alpha amylase, catalytic domain J158_00271 PF02806 Alpha amylase, C-terminal all-beta domain J158_00271 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J158_00273 PF00248 Aldo/keto reductase family J158_00274 PF00135 Carboxylesterase family J158_00275 PF07859 alpha/beta hydrolase fold J158_00275 PF13472 GDSL-like Lipase/Acylhydrolase family J158_00277 PF03480 Bacterial extracellular solute-binding protein, family 7 J158_00279 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J158_00280 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J158_00280 PF04616 Glycosyl hydrolases family 43 J158_00281 PF00356 Bacterial regulatory proteins, lacI family J158_00282 PF04962 KduI/IolB family J158_00285 PF00657 GDSL-like Lipase/Acylhydrolase J158_00288 PF00351 Biopterin-dependent aromatic amino acid hydroxylase J158_00289 PF01037 Lrp/AsnC ligand binding domain J158_00290 PF07660 Secretin and TonB N terminus short domain J158_00290 PF07715 TonB-dependent Receptor Plug Domain J158_00290 PF00593 TonB dependent receptor J158_00291 PF01734 Patatin-like phospholipase J158_00293 PF00005 ABC transporter J158_00296 PF00005 ABC transporter J158_00297 PF00528 Binding-protein-dependent transport system inner membrane component J158_00299 PF03781 Sulfatase-modifying factor enzyme 1 J158_00299 PF12867 DinB superfamily J158_00302 PF01381 Helix-turn-helix J158_00306 PF10609 NUBPL iron-transfer P-loop NTPase J158_00306 PF01883 Iron-sulfur cluster assembly protein J158_00309 PF13091 PLD-like domain J158_00310 PF03061 Thioesterase superfamily J158_00316 PF00107 Zinc-binding dehydrogenase J158_00316 PF08240 Alcohol dehydrogenase GroES-like domain J158_00318 PF02673 Bacitracin resistance protein BacA J158_00319 PF00120 Glutamine synthetase, catalytic domain J158_00319 PF03951 Glutamine synthetase, beta-Grasp domain J158_00320 PF00543 Nitrogen regulatory protein P-II J158_00321 PF00909 Ammonium Transporter Family J158_00322 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_00322 PF00512 His Kinase A (phospho-acceptor) domain J158_00322 PF00989 PAS fold J158_00323 PF02954 Bacterial regulatory protein, Fis family J158_00323 PF00158 Sigma-54 interaction domain J158_00323 PF00072 Response regulator receiver domain J158_00324 PF00080 Copper/zinc superoxide dismutase (SODC) J158_00325 PF00080 Copper/zinc superoxide dismutase (SODC) J158_00326 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J158_00328 PF02803 Thiolase, C-terminal domain J158_00328 PF00108 Thiolase, N-terminal domain J158_00335 PF00581 Rhodanese-like domain J158_00336 PF02556 Preprotein translocase subunit SecB J158_00337 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus J158_00337 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus J158_00339 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J158_00339 PF00205 Thiamine pyrophosphate enzyme, central domain J158_00339 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J158_00340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_00341 PF02954 Bacterial regulatory protein, Fis family J158_00341 PF00072 Response regulator receiver domain J158_00341 PF00158 Sigma-54 interaction domain J158_00344 PF07690 Major Facilitator Superfamily J158_00345 PF00588 SpoU rRNA Methylase family J158_00348 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J158_00348 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J158_00349 PF13784 Fic/DOC family N-terminal J158_00349 PF02661 Fic/DOC family J158_00350 PF00561 alpha/beta hydrolase fold J158_00351 PF03692 Putative zinc- or iron-chelating domain J158_00352 PF00501 AMP-binding enzyme J158_00354 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family J158_00356 PF07478 D-ala D-ala ligase C-terminus J158_00356 PF01820 D-ala D-ala ligase N-terminus J158_00358 PF03109 ABC1 family J158_00360 PF00849 RNA pseudouridylate synthase J158_00362 PF00472 RF-1 domain J158_00364 PF01112 Asparaginase J158_00365 PF01432 Peptidase family M3 J158_00366 PF12706 Beta-lactamase superfamily domain J158_00369 PF12833 Helix-turn-helix domain J158_00370 PF00999 Sodium/hydrogen exchanger family J158_00371 PF03466 LysR substrate binding domain J158_00371 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J158_00372 PF01274 Malate synthase J158_00373 PF00463 Isocitrate lyase family J158_00374 PF00990 Diguanylate cyclase, GGDEF domain J158_00378 PF00326 Prolyl oligopeptidase family J158_00379 PF02785 Biotin carboxylase C-terminal domain J158_00379 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J158_00379 PF00289 Biotin carboxylase, N-terminal domain J158_00379 PF00364 Biotin-requiring enzyme J158_00380 PF01039 Carboxyl transferase domain J158_00381 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J158_00381 PF02770 Acyl-CoA dehydrogenase, middle domain J158_00381 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J158_00392 PF02492 CobW/HypB/UreG, nucleotide-binding domain J158_00392 PF07683 Cobalamin synthesis protein cobW C-terminal domain J158_00396 PF03969 AFG1-like ATPase J158_00397 PF01047 MarR family J158_00398 PF02566 OsmC-like protein J158_00403 PF16884 N-terminal domain of oxidoreductase J158_00403 PF00107 Zinc-binding dehydrogenase J158_00406 PF00849 RNA pseudouridylate synthase J158_00407 PF00593 TonB dependent receptor J158_00409 PF08482 ATP-dependent helicase C-terminal J158_00409 PF00270 DEAD/DEAH box helicase J158_00409 PF04408 Helicase associated domain (HA2) J158_00409 PF00271 Helicase conserved C-terminal domain J158_00410 PF07308 Protein of unknown function (DUF1456) J158_00411 PF00576 HIUase/Transthyretin family J158_00412 PF13454 FAD-NAD(P)-binding J158_00413 PF01014 Uricase J158_00413 PF09349 OHCU decarboxylase J158_00416 PF00266 Aminotransferase class-V J158_00417 PF01546 Peptidase family M20/M25/M40 J158_00417 PF07687 Peptidase dimerisation domain J158_00418 PF03466 LysR substrate binding domain J158_00418 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J158_00419 PF07690 Major Facilitator Superfamily J158_00422 PF01425 Amidase J158_00423 PF01156 Inosine-uridine preferring nucleoside hydrolase J158_00425 PF00860 Permease family J158_00426 PF00111 2Fe-2S iron-sulfur cluster binding domain J158_00427 PF00355 Rieske [2Fe-2S] domain J158_00428 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J158_00428 PF03466 LysR substrate binding domain J158_00429 PF01026 TatD related DNase J158_00432 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J158_00432 PF03466 LysR substrate binding domain J158_00433 PF07690 Major Facilitator Superfamily J158_00436 PF02146 Sir2 family J158_00437 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J158_00438 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J158_00438 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J158_00440 PF00551 Formyl transferase J158_00441 PF00072 Response regulator receiver domain J158_00441 PF00486 Transcriptional regulatory protein, C terminal J158_00442 PF00512 His Kinase A (phospho-acceptor) domain J158_00442 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_00442 PF00672 HAMP domain J158_00443 PF00529 HlyD membrane-fusion protein of T1SS J158_00443 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J158_00444 PF00873 AcrB/AcrD/AcrF family J158_00445 PF02321 Outer membrane efflux protein J158_00447 PF02219 Methylenetetrahydrofolate reductase J158_00448 PF02677 Epoxyqueuosine reductase QueH J158_00449 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J158_00449 PF03466 LysR substrate binding domain J158_00450 PF03358 NADPH-dependent FMN reductase J158_00452 PF08267 Cobalamin-independent synthase, N-terminal domain J158_00452 PF01717 Cobalamin-independent synthase, Catalytic domain J158_00453 PF03812 2-keto-3-deoxygluconate permease J158_00455 PF05368 NmrA-like family J158_00456 PF01638 HxlR-like helix-turn-helix J158_00460 PF00665 Integrase core domain J158_00460 PF13276 HTH-like domain J158_00460 PF13333 Integrase core domain J158_00461 PF01527 Transposase J158_00462 PF13495 Phage integrase, N-terminal SAM-like domain J158_00462 PF00589 Phage integrase family J158_00463 PF00920 Dehydratase family J158_00466 PF00132 Bacterial transferase hexapeptide (six repeats) J158_00467 PF07690 Major Facilitator Superfamily J158_00468 PF01966 HD domain J158_00468 PF11871 Domain of unknown function (DUF3391) J158_00472 PF00171 Aldehyde dehydrogenase family J158_00474 PF01494 FAD binding domain J158_00477 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J158_00477 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J158_00478 PF00230 Major intrinsic protein J158_00479 PF16901 C-terminal domain of alpha-glycerophosphate oxidase J158_00479 PF01266 FAD dependent oxidoreductase J158_00480 PF00455 DeoR C terminal sensor domain J158_00480 PF08220 DeoR-like helix-turn-helix domain J158_00482 PF00355 Rieske [2Fe-2S] domain J158_00483 PF01144 Coenzyme A transferase J158_00484 PF01144 Coenzyme A transferase J158_00485 PF02803 Thiolase, C-terminal domain J158_00485 PF00108 Thiolase, N-terminal domain J158_00486 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal J158_00486 PF00775 Dioxygenase J158_00488 PF10397 Adenylosuccinate lyase C-terminus J158_00488 PF00206 Lyase J158_00489 PF12146 Serine aminopeptidase, S33 J158_00490 PF02627 Carboxymuconolactone decarboxylase family J158_00492 PF01614 Bacterial transcriptional regulator J158_00492 PF09339 IclR helix-turn-helix domain J158_00494 PF07859 alpha/beta hydrolase fold J158_00495 PF10677 Protein of unknown function (DUF2490) J158_00496 PF01134 Glucose inhibited division protein A J158_00496 PF13932 GidA associated domain J158_00498 PF00291 Pyridoxal-phosphate dependent enzyme J158_00502 PF13649 Methyltransferase domain J158_00504 PF12697 Alpha/beta hydrolase family J158_00506 PF00155 Aminotransferase class I and II J158_00507 PF04055 Radical SAM superfamily J158_00507 PF06968 Biotin and Thiamin Synthesis associated domain J158_00509 PF01040 UbiA prenyltransferase family J158_00513 PF05819 NolX protein J158_00521 PF01313 Bacterial export proteins, family 3 J158_00522 PF00813 FliP family J158_00525 PF00771 FHIPEP family J158_00526 PF01312 FlhB HrpN YscU SpaS Family J158_00529 PF01514 Secretory protein of YscJ/FliF family J158_00532 PF18269 T3SS EscN ATPase C-terminal domain J158_00532 PF02874 ATP synthase alpha/beta family, beta-barrel domain J158_00532 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J158_00534 PF01311 Bacterial export proteins, family 1 J158_00537 PF01464 Transglycosylase SLT domain J158_00540 PF12795 Mechanosensitive ion channel porin domain J158_00540 PF12794 Mechanosensitive ion channel inner membrane domain 1 J158_00540 PF00924 Mechanosensitive ion channel J158_00541 PF00884 Sulfatase J158_00542 PF03109 ABC1 family J158_00543 PF05661 Protein of unknown function (DUF808) J158_00544 PF00072 Response regulator receiver domain J158_00544 PF00990 Diguanylate cyclase, GGDEF domain J158_00545 PF00534 Glycosyl transferases group 1 J158_00545 PF08323 Starch synthase catalytic domain J158_00546 PF00128 Alpha amylase, catalytic domain J158_00546 PF02806 Alpha amylase, C-terminal all-beta domain J158_00546 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J158_00547 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J158_00547 PF11941 Domain of unknown function (DUF3459) J158_00547 PF00128 Alpha amylase, catalytic domain J158_00548 PF02446 4-alpha-glucanotransferase J158_00549 PF00128 Alpha amylase, catalytic domain J158_00551 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J158_00551 PF00128 Alpha amylase, catalytic domain J158_00552 PF13460 NAD(P)H-binding J158_00555 PF06903 VirK protein J158_00556 PF02321 Outer membrane efflux protein J158_00559 PF00873 AcrB/AcrD/AcrF family J158_00562 PF00271 Helicase conserved C-terminal domain J158_00562 PF00270 DEAD/DEAH box helicase J158_00564 PF02817 e3 binding domain J158_00564 PF00364 Biotin-requiring enzyme J158_00564 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J158_00566 PF02780 Transketolase, C-terminal domain J158_00566 PF02779 Transketolase, pyrimidine binding domain J158_00567 PF00676 Dehydrogenase E1 component J158_00569 PF03301 Tryptophan 2,3-dioxygenase J158_00570 PF00854 POT family J158_00572 PF01047 MarR family J158_00573 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J158_00574 PF04209 homogentisate 1,2-dioxygenase J158_00577 PF03334 Na+/H+ antiporter subunit J158_00578 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) J158_00580 PF00361 Proton-conducting membrane transporter J158_00581 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J158_00582 PF00361 Proton-conducting membrane transporter J158_00582 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter J158_00582 PF13244 Domain of unknown function (DUF4040) J158_00582 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J158_00585 PF07504 Fungalysin/Thermolysin Propeptide Motif J158_00585 PF01483 Proprotein convertase P-domain J158_00585 PF01447 Thermolysin metallopeptidase, catalytic domain J158_00585 PF02868 Thermolysin metallopeptidase, alpha-helical domain J158_00586 PF00182 Chitinase class I J158_00590 PF01259 SAICAR synthetase J158_00591 PF00226 DnaJ domain J158_00591 PF05099 Tellurite resistance protein TerB J158_00593 PF00834 Ribulose-phosphate 3 epimerase family J158_00594 PF00583 Acetyltransferase (GNAT) family J158_00595 PF00781 Diacylglycerol kinase catalytic domain J158_00596 PF04715 Anthranilate synthase component I, N terminal region J158_00596 PF00425 chorismate binding enzyme J158_00598 PF00117 Glutamine amidotransferase class-I J158_00600 PF02885 Glycosyl transferase family, helical bundle domain J158_00600 PF00591 Glycosyl transferase family, a/b domain J158_00601 PF00218 Indole-3-glycerol phosphate synthase J158_00603 PF00325 Bacterial regulatory proteins, crp family J158_00603 PF00027 Cyclic nucleotide-binding domain J158_00604 PF02675 S-adenosylmethionine decarboxylase J158_00605 PF00893 Small Multidrug Resistance protein J158_00606 PF03232 Ubiquinone biosynthesis protein COQ7 J158_00607 PF00572 Ribosomal protein L13 J158_00608 PF00380 Ribosomal protein S9/S16 J158_00611 PF00293 NUDIX domain J158_00612 PF00210 Ferritin-like domain J158_00613 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J158_00613 PF00072 Response regulator receiver domain J158_00613 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_00613 PF00512 His Kinase A (phospho-acceptor) domain J158_00613 PF00672 HAMP domain J158_00613 PF01627 Hpt domain J158_00614 PF00072 Response regulator receiver domain J158_00614 PF00486 Transcriptional regulatory protein, C terminal J158_00618 PF01521 Iron-sulphur cluster biosynthesis J158_00621 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain J158_00621 PF09297 NADH pyrophosphatase zinc ribbon domain J158_00621 PF00293 NUDIX domain J158_00622 PF17113 Regulatory signalling modulator protein AmpE J158_00622 PF03186 CobD/Cbib protein J158_00625 PF07690 Major Facilitator Superfamily J158_00626 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J158_00626 PF03466 LysR substrate binding domain J158_00627 PF07690 Major Facilitator Superfamily J158_00628 PF12805 FUSC-like inner membrane protein yccS J158_00629 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain J158_00629 PF02843 Phosphoribosylglycinamide synthetase, C domain J158_00629 PF02844 Phosphoribosylglycinamide synthetase, N domain J158_00631 PF01808 AICARFT/IMPCHase bienzyme J158_00631 PF02142 MGS-like domain J158_00632 PF01066 CDP-alcohol phosphatidyltransferase J158_00633 PF12147 Putative methyltransferase J158_00633 PF12146 Serine aminopeptidase, S33 J158_00634 PF00782 Dual specificity phosphatase, catalytic domain J158_00640 PF02954 Bacterial regulatory protein, Fis family J158_00643 PF01381 Helix-turn-helix J158_00648 PF00289 Biotin carboxylase, N-terminal domain J158_00648 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J158_00648 PF02785 Biotin carboxylase C-terminal domain J158_00650 PF00364 Biotin-requiring enzyme J158_00651 PF01220 Dehydroquinase class II J158_00652 PF11412 Disulphide bond corrector protein DsbC J158_00652 PF02683 Cytochrome C biogenesis protein transmembrane region J158_00653 PF03091 CutA1 divalent ion tolerance protein J158_00656 PF01852 START domain J158_00658 PF00106 short chain dehydrogenase J158_00659 PF04231 Endonuclease I J158_00660 PF00166 Chaperonin 10 Kd subunit J158_00661 PF00118 TCP-1/cpn60 chaperonin family J158_00663 PF00593 TonB dependent receptor J158_00663 PF07715 TonB-dependent Receptor Plug Domain J158_00664 PF00793 DAHP synthetase I family J158_00667 PF08450 SMP-30/Gluconolactonase/LRE-like region J158_00669 PF03710 Glutamate-ammonia ligase adenylyltransferase J158_00669 PF08335 GlnD PII-uridylyltransferase J158_00670 PF02592 Putative vitamin uptake transporter J158_00673 PF00881 Nitroreductase family J158_00674 PF04264 YceI-like domain J158_00678 PF16957 Malonate decarboxylase, alpha subunit, transporter J158_00679 PF06857 Malonate decarboxylase delta subunit (MdcD) J158_00680 PF01039 Carboxyl transferase domain J158_00682 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG J158_00683 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase J158_00685 PF00698 Acyl transferase domain J158_00687 PF07729 FCD domain J158_00687 PF00392 Bacterial regulatory proteins, gntR family J158_00688 PF13419 Haloacid dehalogenase-like hydrolase J158_00694 PF07745 Glycosyl hydrolase family 53 J158_00695 PF00456 Transketolase, thiamine diphosphate binding domain J158_00695 PF17831 Pyruvate dehydrogenase E1 component middle domain J158_00696 PF13333 Integrase core domain J158_00696 PF13276 HTH-like domain J158_00696 PF00665 Integrase core domain J158_00697 PF01527 Transposase J158_00698 PF00106 short chain dehydrogenase J158_00701 PF00106 short chain dehydrogenase J158_00703 PF13409 Glutathione S-transferase, N-terminal domain J158_00708 PF12823 Domain of unknown function (DUF3817) J158_00708 PF03176 MMPL family J158_00709 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J158_00709 PF00326 Prolyl oligopeptidase family J158_00710 PF07759 Protein of unknown function (DUF1615) J158_00711 PF05230 MASE2 domain J158_00711 PF00990 Diguanylate cyclase, GGDEF domain J158_00715 PF00892 EamA-like transporter family J158_00716 PF00497 Bacterial extracellular solute-binding proteins, family 3 J158_00719 PF00324 Amino acid permease J158_00721 PF01544 CorA-like Mg2+ transporter protein J158_00723 PF01204 Trehalase J158_00725 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J158_00725 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J158_00730 PF08447 PAS fold J158_00730 PF08448 PAS fold J158_00730 PF00990 Diguanylate cyclase, GGDEF domain J158_00730 PF00563 EAL domain J158_00731 PF00672 HAMP domain J158_00731 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J158_00731 PF02203 Tar ligand binding domain homologue J158_00732 PF00150 Cellulase (glycosyl hydrolase family 5) J158_00732 PF00553 Cellulose binding domain J158_00733 PF01740 STAS domain J158_00733 PF00916 Sulfate permease family J158_00734 PF00990 Diguanylate cyclase, GGDEF domain J158_00734 PF08448 PAS fold J158_00737 PF13632 Glycosyl transferase family group 2 J158_00739 PF06580 Histidine kinase J158_00739 PF07694 5TMR of 5TMR-LYT J158_00740 PF04397 LytTr DNA-binding domain J158_00740 PF00072 Response regulator receiver domain J158_00741 PF03900 Porphobilinogen deaminase, C-terminal domain J158_00741 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain J158_00746 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J158_00746 PF00326 Prolyl oligopeptidase family J158_00748 PF00155 Aminotransferase class I and II J158_00749 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J158_00749 PF00326 Prolyl oligopeptidase family J158_00750 PF04304 Protein of unknown function (DUF454) J158_00752 PF01678 Diaminopimelate epimerase J158_00754 PF00589 Phage integrase family J158_00754 PF02899 Phage integrase, N-terminal SAM-like domain J158_00755 PF00227 Proteasome subunit J158_00756 PF07724 AAA domain (Cdc48 subfamily) J158_00756 PF00004 ATPase family associated with various cellular activities (AAA) J158_00756 PF10431 C-terminal, D2-small domain, of ClpB protein J158_00758 PF13673 Acetyltransferase (GNAT) domain J158_00759 PF13533 Biotin-lipoyl like J158_00761 PF01209 ubiE/COQ5 methyltransferase family J158_00762 PF00563 EAL domain J158_00762 PF03707 Bacterial signalling protein N terminal repeat J158_00762 PF00990 Diguanylate cyclase, GGDEF domain J158_00763 PF11838 ERAP1-like C-terminal domain J158_00763 PF01433 Peptidase family M1 domain J158_00766 PF13360 PQQ-like domain J158_00767 PF00497 Bacterial extracellular solute-binding proteins, family 3 J158_00770 PF00107 Zinc-binding dehydrogenase J158_00770 PF08240 Alcohol dehydrogenase GroES-like domain J158_00772 PF02954 Bacterial regulatory protein, Fis family J158_00772 PF01590 GAF domain J158_00772 PF00158 Sigma-54 interaction domain J158_00773 PF00294 pfkB family carbohydrate kinase J158_00775 PF04085 rod shape-determining protein MreC J158_00777 PF00905 Penicillin binding protein transpeptidase domain J158_00777 PF03717 Penicillin-binding Protein dimerisation domain J158_00778 PF01098 Cell cycle protein J158_00779 PF00295 Glycosyl hydrolases family 28 J158_00780 PF13406 Transglycosylase SLT domain J158_00781 PF05036 Sporulation related domain J158_00781 PF03330 Lytic transglycolase J158_00782 PF07943 Penicillin-binding protein 5, C-terminal domain J158_00782 PF00768 D-alanyl-D-alanine carboxypeptidase J158_00784 PF04359 Protein of unknown function (DUF493) J158_00785 PF03099 Biotin/lipoate A/B protein ligase family J158_00786 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family J158_00786 PF04055 Radical SAM superfamily J158_00787 PF11818 C-terminal domain of tail specific protease (DUF3340) J158_00787 PF17804 Tail specific protease N-terminal domain J158_00787 PF00595 PDZ domain J158_00787 PF03572 Peptidase family S41 J158_00789 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J158_00789 PF03466 LysR substrate binding domain J158_00791 PF00293 NUDIX domain J158_00791 PF01467 Cytidylyltransferase-like J158_00798 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain J158_00798 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J158_00799 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J158_00799 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J158_00800 PF04972 BON domain J158_00801 PF00512 His Kinase A (phospho-acceptor) domain J158_00801 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_00801 PF01590 GAF domain J158_00801 PF00360 Phytochrome region J158_00801 PF08446 PAS fold J158_00802 PF00072 Response regulator receiver domain J158_00803 PF00512 His Kinase A (phospho-acceptor) domain J158_00803 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_00804 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J158_00813 PF03958 Bacterial type II/III secretion system short domain J158_00813 PF00263 Bacterial type II and III secretion system protein J158_00814 PF00437 Type II/IV secretion system protein J158_00815 PF00482 Type II secretion system (T2SS), protein F J158_00816 PF07963 Prokaryotic N-terminal methylation motif J158_00816 PF08334 Type II secretion system (T2SS), protein G J158_00817 PF12019 Type II transport protein GspH J158_00817 PF07963 Prokaryotic N-terminal methylation motif J158_00819 PF11612 Type II secretion system (T2SS), protein J J158_00819 PF07963 Prokaryotic N-terminal methylation motif J158_00820 PF03934 Type II secretion system (T2SS), protein K J158_00826 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J158_00826 PF02837 Glycosyl hydrolases family 2, sugar binding domain J158_00826 PF16355 Domain of unknown function (DUF4982) J158_00826 PF00703 Glycosyl hydrolases family 2 J158_00826 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 J158_00831 PF07690 Major Facilitator Superfamily J158_00832 PF00356 Bacterial regulatory proteins, lacI family J158_00833 PF01380 SIS domain J158_00834 PF01979 Amidohydrolase family J158_00836 PF01966 HD domain J158_00836 PF12627 Probable RNA and SrmB- binding site of polymerase A J158_00836 PF01743 Poly A polymerase head domain J158_00837 PF00732 GMC oxidoreductase J158_00837 PF05199 GMC oxidoreductase J158_00838 PF00171 Aldehyde dehydrogenase family J158_00839 PF02028 BCCT, betaine/carnitine/choline family transporter J158_00841 PF01323 DSBA-like thioredoxin domain J158_00844 PF00034 Cytochrome c J158_00845 PF01926 50S ribosome-binding GTPase J158_00846 PF10996 Beta-Casp domain J158_00846 PF00753 Metallo-beta-lactamase superfamily J158_00846 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain J158_00848 PF04107 Glutamate-cysteine ligase family 2(GCS2) J158_00849 PF00512 His Kinase A (phospho-acceptor) domain J158_00849 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_00849 PF00672 HAMP domain J158_00850 PF00486 Transcriptional regulatory protein, C terminal J158_00850 PF00072 Response regulator receiver domain J158_00853 PF02583 Metal-sensitive transcriptional repressor J158_00854 PF08240 Alcohol dehydrogenase GroES-like domain J158_00854 PF00107 Zinc-binding dehydrogenase J158_00855 PF04828 Glutathione-dependent formaldehyde-activating enzyme J158_00856 PF00756 Putative esterase J158_00857 PF00155 Aminotransferase class I and II J158_00857 PF00392 Bacterial regulatory proteins, gntR family J158_00858 PF02567 Phenazine biosynthesis-like protein J158_00859 PF00892 EamA-like transporter family J158_00861 PF00005 ABC transporter J158_00861 PF12848 ABC transporter J158_00863 PF00464 Serine hydroxymethyltransferase J158_00864 PF03477 ATP cone domain J158_00866 PF01872 RibD C-terminal domain J158_00866 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J158_00869 PF00677 Lumazine binding domain J158_00870 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J158_00870 PF00925 GTP cyclohydrolase II J158_00871 PF00885 6,7-dimethyl-8-ribityllumazine synthase J158_00872 PF01029 NusB family J158_00873 PF00586 AIR synthase related protein, N-terminal domain J158_00873 PF02769 AIR synthase related protein, C-terminal domain J158_00877 PF03814 Potassium-transporting ATPase A subunit J158_00879 PF02669 K+-transporting ATPase, c chain J158_00880 PF13492 GAF domain J158_00880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_00880 PF02702 Osmosensitive K+ channel His kinase sensor domain J158_00880 PF13493 Domain of unknown function (DUF4118) J158_00880 PF00512 His Kinase A (phospho-acceptor) domain J158_00881 PF00486 Transcriptional regulatory protein, C terminal J158_00881 PF00072 Response regulator receiver domain J158_00884 PF02913 FAD linked oxidases, C-terminal domain J158_00884 PF01565 FAD binding domain J158_00885 PF04307 LexA-binding, inner membrane-associated putative hydrolase J158_00886 PF02021 Uncharacterised protein family UPF0102 J158_00888 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J158_00893 PF02381 MraZ protein, putative antitoxin-like J158_00894 PF01795 MraW methylase family J158_00895 PF04999 Cell division protein FtsL J158_00896 PF03717 Penicillin-binding Protein dimerisation domain J158_00896 PF00905 Penicillin binding protein transpeptidase domain J158_00897 PF01225 Mur ligase family, catalytic domain J158_00897 PF08245 Mur ligase middle domain J158_00897 PF02875 Mur ligase family, glutamate ligase domain J158_00898 PF08245 Mur ligase middle domain J158_00898 PF01225 Mur ligase family, catalytic domain J158_00898 PF02875 Mur ligase family, glutamate ligase domain J158_00899 PF00953 Glycosyl transferase family 4 J158_00900 PF01098 Cell cycle protein J158_00901 PF03033 Glycosyltransferase family 28 N-terminal domain J158_00901 PF04101 Glycosyltransferase family 28 C-terminal domain J158_00902 PF01225 Mur ligase family, catalytic domain J158_00902 PF02875 Mur ligase family, glutamate ligase domain J158_00902 PF08245 Mur ligase middle domain J158_00903 PF07478 D-ala D-ala ligase C-terminus J158_00903 PF01820 D-ala D-ala ligase N-terminus J158_00904 PF08478 POTRA domain, FtsQ-type J158_00904 PF03799 Cell division protein FtsQ J158_00905 PF02491 SHS2 domain inserted in FTSA J158_00906 PF12327 FtsZ family, C-terminal domain J158_00906 PF00091 Tubulin/FtsZ family, GTPase domain J158_00907 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase J158_00909 PF08525 Opacity-associated protein A N-terminal motif J158_00909 PF01476 LysM domain J158_00909 PF01551 Peptidase family M23 J158_00910 PF01043 SecA preprotein cross-linking domain J158_00910 PF07516 SecA Wing and Scaffold domain J158_00910 PF02810 SEC-C motif J158_00910 PF07517 SecA DEAD-like domain J158_00911 PF00293 NUDIX domain J158_00913 PF02219 Methylenetetrahydrofolate reductase J158_00916 PF14765 Polyketide synthase dehydratase J158_00916 PF00550 Phosphopantetheine attachment site J158_00916 PF08659 KR domain J158_00916 PF02801 Beta-ketoacyl synthase, C-terminal domain J158_00916 PF00109 Beta-ketoacyl synthase, N-terminal domain J158_00916 PF16197 Ketoacyl-synthetase C-terminal extension J158_00916 PF00107 Zinc-binding dehydrogenase J158_00916 PF08240 Alcohol dehydrogenase GroES-like domain J158_00916 PF00698 Acyl transferase domain J158_00917 PF09286 Pro-kumamolisin, activation domain J158_00917 PF00082 Subtilase family J158_00919 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J158_00920 PF00128 Alpha amylase, catalytic domain J158_00926 PF13649 Methyltransferase domain J158_00927 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain J158_00927 PF05221 S-adenosyl-L-homocysteine hydrolase J158_00930 PF00311 Phosphoenolpyruvate carboxylase J158_00935 PF00328 Histidine phosphatase superfamily (branch 2) J158_00936 PF02772 S-adenosylmethionine synthetase, central domain J158_00936 PF00438 S-adenosylmethionine synthetase, N-terminal domain J158_00936 PF02773 S-adenosylmethionine synthetase, C-terminal domain J158_00938 PF13649 Methyltransferase domain J158_00939 PF01207 Dihydrouridine synthase (Dus) J158_00942 PF00294 pfkB family carbohydrate kinase J158_00943 PF07670 Nucleoside recognition J158_00943 PF07662 Na+ dependent nucleoside transporter C-terminus J158_00943 PF01773 Na+ dependent nucleoside transporter N-terminus J158_00944 PF00248 Aldo/keto reductase family J158_00946 PF07715 TonB-dependent Receptor Plug Domain J158_00946 PF00593 TonB dependent receptor J158_00951 PF00528 Binding-protein-dependent transport system inner membrane component J158_00952 PF00005 ABC transporter J158_00954 PF02668 Taurine catabolism dioxygenase TauD, TfdA family J158_00956 PF00005 ABC transporter J158_00957 PF13472 GDSL-like Lipase/Acylhydrolase family J158_00958 PF00072 Response regulator receiver domain J158_00958 PF00486 Transcriptional regulatory protein, C terminal J158_00959 PF00512 His Kinase A (phospho-acceptor) domain J158_00959 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_00959 PF08521 Two-component sensor kinase N-terminal J158_00961 PF01219 Prokaryotic diacylglycerol kinase J158_00965 PF01790 Prolipoprotein diacylglyceryl transferase J158_00966 PF00303 Thymidylate synthase J158_00968 PF00186 Dihydrofolate reductase J158_00969 PF00158 Sigma-54 interaction domain J158_00970 PF08028 Acyl-CoA dehydrogenase, C-terminal domain J158_00970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J158_00971 PF00005 ABC transporter J158_00972 PF00528 Binding-protein-dependent transport system inner membrane component J158_00974 PF00296 Luciferase-like monooxygenase J158_00975 PF03358 NADPH-dependent FMN reductase J158_00979 PF00296 Luciferase-like monooxygenase J158_00980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J158_00981 PF00528 Binding-protein-dependent transport system inner membrane component J158_00984 PF00005 ABC transporter J158_00984 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J158_00985 PF00149 Calcineurin-like phosphoesterase J158_00986 PF04379 ApaG domain J158_00987 PF00398 Ribosomal RNA adenine dimethylase J158_00988 PF04166 Pyridoxal phosphate biosynthetic protein PdxA J158_00989 PF00639 PPIC-type PPIASE domain J158_00989 PF09312 SurA N-terminal domain J158_00990 PF04453 LPS transport system D J158_00990 PF03968 OstA-like protein J158_00993 PF00850 Histone deacetylase domain J158_00994 PF01923 Cobalamin adenosyltransferase J158_00996 PF01494 FAD binding domain J158_00997 PF01494 FAD binding domain J158_01001 PF00392 Bacterial regulatory proteins, gntR family J158_01001 PF07729 FCD domain J158_01002 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J158_01003 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit J158_01003 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J158_01004 PF03466 LysR substrate binding domain J158_01004 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J158_01005 PF13193 AMP-binding enzyme C-terminal domain J158_01005 PF00501 AMP-binding enzyme J158_01006 PF00171 Aldehyde dehydrogenase family J158_01007 PF00378 Enoyl-CoA hydratase/isomerase J158_01011 PF08450 SMP-30/Gluconolactonase/LRE-like region J158_01012 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J158_01012 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J158_01013 PF18125 RlmM ferredoxin-like domain J158_01013 PF01728 FtsJ-like methyltransferase J158_01016 PF00892 EamA-like transporter family J158_01017 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain J158_01017 PF00749 tRNA synthetases class I (E and Q), catalytic domain J158_01020 PF00072 Response regulator receiver domain J158_01020 PF00990 Diguanylate cyclase, GGDEF domain J158_01021 PF01627 Hpt domain J158_01021 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J158_01021 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_01021 PF00512 His Kinase A (phospho-acceptor) domain J158_01021 PF00072 Response regulator receiver domain J158_01021 PF00672 HAMP domain J158_01022 PF00196 Bacterial regulatory proteins, luxR family J158_01022 PF00072 Response regulator receiver domain J158_01024 PF01625 Peptide methionine sulfoxide reductase J158_01026 PF00923 Transaldolase/Fructose-6-phosphate aldolase J158_01027 PF01272 Transcription elongation factor, GreA/GreB, C-term J158_01027 PF14760 Rnk N-terminus J158_01028 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J158_01028 PF03466 LysR substrate binding domain J158_01029 PF13192 Thioredoxin domain J158_01029 PF07992 Pyridine nucleotide-disulphide oxidoreductase J158_01030 PF00578 AhpC/TSA family J158_01030 PF10417 C-terminal domain of 1-Cys peroxiredoxin J158_01031 PF05175 Methyltransferase small domain J158_01031 PF17827 PrmC N-terminal domain J158_01032 PF00561 alpha/beta hydrolase fold J158_01034 PF00293 NUDIX domain J158_01035 PF01367 5'-3' exonuclease, C-terminal SAM fold J158_01035 PF00476 DNA polymerase family A J158_01035 PF01612 3'-5' exonuclease J158_01035 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J158_01041 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch J158_01041 PF05222 Alanine dehydrogenase/PNT, N-terminal domain J158_01041 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J158_01046 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch J158_01047 PF02233 NAD(P) transhydrogenase beta subunit J158_01050 PF01063 Amino-transferase class IV J158_01051 PF04151 Bacterial pre-peptidase C-terminal domain J158_01051 PF00082 Subtilase family J158_01052 PF04151 Bacterial pre-peptidase C-terminal domain J158_01052 PF00082 Subtilase family J158_01053 PF00082 Subtilase family J158_01053 PF04151 Bacterial pre-peptidase C-terminal domain J158_01054 PF04073 Aminoacyl-tRNA editing domain J158_01056 PF17189 Glycosyl hydrolase family 30 beta sandwich domain J158_01056 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain J158_01057 PF17189 Glycosyl hydrolase family 30 beta sandwich domain J158_01057 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain J158_01059 PF03358 NADPH-dependent FMN reductase J158_01060 PF03631 Virulence factor BrkB J158_01061 PF08534 Redoxin J158_01062 PF00708 Acylphosphatase J158_01064 PF03976 Polyphosphate kinase 2 (PPK2) J158_01065 PF00994 Probable molybdopterin binding domain J158_01067 PF00472 RF-1 domain J158_01067 PF03462 PCRF domain J158_01068 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain J158_01068 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain J158_01068 PF01488 Shikimate / quinate 5-dehydrogenase J158_01070 PF03550 Outer membrane lipoprotein LolB J158_01071 PF00288 GHMP kinases N terminal domain J158_01071 PF08544 GHMP kinases C terminal J158_01073 PF14572 Phosphoribosyl synthetase-associated domain J158_01073 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase J158_01074 PF14693 Ribosomal protein TL5, C-terminal domain J158_01074 PF01386 Ribosomal L25p family J158_01075 PF01195 Peptidyl-tRNA hydrolase J158_01076 PF01926 50S ribosome-binding GTPase J158_01076 PF06071 Protein of unknown function (DUF933) J158_01080 PF00009 Elongation factor Tu GTP binding domain J158_01080 PF03143 Elongation factor Tu C-terminal domain J158_01080 PF03144 Elongation factor Tu domain 2 J158_01082 PF00584 SecE/Sec61-gamma subunits of protein translocation complex J158_01083 PF00467 KOW motif J158_01083 PF02357 Transcription termination factor nusG J158_01084 PF03946 Ribosomal protein L11, N-terminal domain J158_01084 PF00298 Ribosomal protein L11, RNA binding domain J158_01085 PF00687 Ribosomal protein L1p/L10e family J158_01086 PF00466 Ribosomal protein L10 J158_01087 PF00542 Ribosomal protein L7/L12 C-terminal domain J158_01087 PF16320 Ribosomal protein L7/L12 dimerisation domain J158_01089 PF04563 RNA polymerase beta subunit J158_01089 PF00562 RNA polymerase Rpb2, domain 6 J158_01089 PF04560 RNA polymerase Rpb2, domain 7 J158_01089 PF04565 RNA polymerase Rpb2, domain 3 J158_01089 PF04561 RNA polymerase Rpb2, domain 2 J158_01089 PF10385 RNA polymerase beta subunit external 1 domain J158_01090 PF00623 RNA polymerase Rpb1, domain 2 J158_01090 PF05000 RNA polymerase Rpb1, domain 4 J158_01090 PF04997 RNA polymerase Rpb1, domain 1 J158_01090 PF04998 RNA polymerase Rpb1, domain 5 J158_01090 PF04983 RNA polymerase Rpb1, domain 3 J158_01091 PF00164 Ribosomal protein S12/S23 J158_01092 PF00177 Ribosomal protein S7p/S5e J158_01093 PF00009 Elongation factor Tu GTP binding domain J158_01093 PF03144 Elongation factor Tu domain 2 J158_01093 PF14492 Elongation Factor G, domain II J158_01093 PF00679 Elongation factor G C-terminus J158_01093 PF03764 Elongation factor G, domain IV J158_01094 PF03143 Elongation factor Tu C-terminal domain J158_01094 PF03144 Elongation factor Tu domain 2 J158_01094 PF00009 Elongation factor Tu GTP binding domain J158_01095 PF00338 Ribosomal protein S10p/S20e J158_01096 PF00297 Ribosomal protein L3 J158_01097 PF00573 Ribosomal protein L4/L1 family J158_01098 PF00276 Ribosomal protein L23 J158_01099 PF03947 Ribosomal Proteins L2, C-terminal domain J158_01099 PF00181 Ribosomal Proteins L2, RNA binding domain J158_01100 PF00203 Ribosomal protein S19 J158_01101 PF00237 Ribosomal protein L22p/L17e J158_01102 PF00189 Ribosomal protein S3, C-terminal domain J158_01102 PF07650 KH domain J158_01103 PF00252 Ribosomal protein L16p/L10e J158_01104 PF00831 Ribosomal L29 protein J158_01105 PF00366 Ribosomal protein S17 J158_01106 PF00238 Ribosomal protein L14p/L23e J158_01107 PF00467 KOW motif J158_01107 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 J158_01108 PF00673 ribosomal L5P family C-terminus J158_01108 PF00281 Ribosomal protein L5 J158_01109 PF00253 Ribosomal protein S14p/S29e J158_01110 PF00410 Ribosomal protein S8 J158_01111 PF00347 Ribosomal protein L6 J158_01112 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast J158_01113 PF00333 Ribosomal protein S5, N-terminal domain J158_01113 PF03719 Ribosomal protein S5, C-terminal domain J158_01114 PF00327 Ribosomal protein L30p/L7e J158_01115 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A J158_01116 PF00344 SecY translocase J158_01117 PF00416 Ribosomal protein S13/S18 J158_01118 PF00411 Ribosomal protein S11 J158_01119 PF01479 S4 domain J158_01119 PF00163 Ribosomal protein S4/S9 N-terminal domain J158_01120 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain J158_01120 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain J158_01120 PF01000 RNA polymerase Rpb3/RpoA insert domain J158_01121 PF01196 Ribosomal protein L17 J158_01122 PF02600 Disulfide bond formation protein DsbB J158_01124 PF01474 Class-II DAHP synthetase family J158_01126 PF01425 Amidase J158_01129 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J158_01130 PF00056 lactate/malate dehydrogenase, NAD binding domain J158_01130 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain J158_01131 PF00043 Glutathione S-transferase, C-terminal domain J158_01131 PF02798 Glutathione S-transferase, N-terminal domain J158_01133 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J158_01133 PF07992 Pyridine nucleotide-disulphide oxidoreductase J158_01134 PF00107 Zinc-binding dehydrogenase J158_01134 PF08240 Alcohol dehydrogenase GroES-like domain J158_01135 PF05736 OprF membrane domain J158_01135 PF00691 OmpA family J158_01137 PF00849 RNA pseudouridylate synthase J158_01139 PF00155 Aminotransferase class I and II J158_01141 PF00528 Binding-protein-dependent transport system inner membrane component J158_01142 PF00528 Binding-protein-dependent transport system inner membrane component J158_01143 PF17850 CysA C-terminal regulatory domain J158_01143 PF00005 ABC transporter J158_01143 PF12857 TOBE-like domain J158_01145 PF08240 Alcohol dehydrogenase GroES-like domain J158_01145 PF00107 Zinc-binding dehydrogenase J158_01147 PF05506 Domain of unknown function (DUF756) J158_01147 PF04185 Phosphoesterase family J158_01148 PF10459 Peptidase S46 J158_01149 PF10459 Peptidase S46 J158_01150 PF00300 Histidine phosphatase superfamily (branch 1) J158_01151 PF02875 Mur ligase family, glutamate ligase domain J158_01151 PF08245 Mur ligase middle domain J158_01154 PF00156 Phosphoribosyl transferase domain J158_01155 PF04305 Protein of unknown function (DUF455) J158_01159 PF00149 Calcineurin-like phosphoesterase J158_01161 PF01569 PAP2 superfamily J158_01162 PF13439 Glycosyltransferase Family 4 J158_01162 PF00534 Glycosyl transferases group 1 J158_01163 PF02541 Ppx/GppA phosphatase family J158_01164 PF13090 Polyphosphate kinase C-terminal domain 2 J158_01164 PF02503 Polyphosphate kinase middle domain J158_01164 PF13089 Polyphosphate kinase N-terminal domain J158_01164 PF17941 Polyphosphate kinase C-terminal domain 1 J158_01165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_01165 PF00989 PAS fold J158_01165 PF11808 Phosphate regulon sensor protein PhoR J158_01165 PF00512 His Kinase A (phospho-acceptor) domain J158_01166 PF00486 Transcriptional regulatory protein, C terminal J158_01166 PF00072 Response regulator receiver domain J158_01167 PF01435 Peptidase family M48 J158_01167 PF13181 Tetratricopeptide repeat J158_01168 PF00462 Glutaredoxin J158_01170 PF00180 Isocitrate/isopropylmalate dehydrogenase J158_01176 PF13333 Integrase core domain J158_01176 PF00665 Integrase core domain J158_01176 PF13276 HTH-like domain J158_01177 PF01527 Transposase J158_01200 PF01527 Transposase J158_01201 PF13333 Integrase core domain J158_01201 PF13276 HTH-like domain J158_01201 PF00665 Integrase core domain J158_01204 PF00512 His Kinase A (phospho-acceptor) domain J158_01204 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_01204 PF00989 PAS fold J158_01207 PF05697 Bacterial trigger factor protein (TF) J158_01207 PF05698 Bacterial trigger factor protein (TF) C-terminus J158_01208 PF00574 Clp protease J158_01209 PF06689 ClpX C4-type zinc finger J158_01209 PF10431 C-terminal, D2-small domain, of ClpB protein J158_01209 PF07724 AAA domain (Cdc48 subfamily) J158_01210 PF02190 ATP-dependent protease La (LON) substrate-binding domain J158_01210 PF00004 ATPase family associated with various cellular activities (AAA) J158_01210 PF05362 Lon protease (S16) C-terminal proteolytic domain J158_01211 PF00216 Bacterial DNA-binding protein J158_01217 PF05257 CHAP domain J158_01217 PF01476 LysM domain J158_01218 PF00753 Metallo-beta-lactamase superfamily J158_01218 PF16123 Hydroxyacylglutathione hydrolase C-terminus J158_01220 PF00075 RNase H J158_01221 PF00929 Exonuclease J158_01225 PF01075 Glycosyltransferase family 9 (heptosyltransferase) J158_01227 PF00753 Metallo-beta-lactamase superfamily J158_01227 PF12706 Beta-lactamase superfamily domain J158_01228 PF04055 Radical SAM superfamily J158_01228 PF06463 Molybdenum Cofactor Synthesis C J158_01229 PF01967 MoaC family J158_01230 PF02597 ThiS family J158_01231 PF02391 MoaE protein J158_01234 PF01527 Transposase J158_01235 PF13276 HTH-like domain J158_01235 PF00665 Integrase core domain J158_01235 PF13333 Integrase core domain J158_01241 PF12170 DNA polymerase III tau subunit V interacting with alpha J158_01241 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding J158_01241 PF12169 DNA polymerase III subunits gamma and tau domain III J158_01242 PF02575 YbaB/EbfC DNA-binding family J158_01243 PF02132 RecR protein J158_01243 PF13662 Toprim domain J158_01244 PF01230 HIT domain J158_01246 PF11992 Domain of unknown function (DUF3488) J158_01246 PF13559 Domain of unknown function (DUF4129) J158_01246 PF01841 Transglutaminase-like superfamily J158_01248 PF07726 ATPase family associated with various cellular activities (AAA) J158_01248 PF17863 AAA lid domain J158_01252 PF02545 Maf-like protein J158_01253 PF02620 Large ribosomal RNA subunit accumulation protein YceD J158_01254 PF01783 Ribosomal L32p protein family J158_01255 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J158_01255 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J158_01257 PF00698 Acyl transferase domain J158_01259 PF00550 Phosphopantetheine attachment site J158_01260 PF00109 Beta-ketoacyl synthase, N-terminal domain J158_01260 PF02801 Beta-ketoacyl synthase, C-terminal domain J158_01261 PF00425 chorismate binding enzyme J158_01261 PF04715 Anthranilate synthase component I, N terminal region J158_01262 PF02618 YceG-like family J158_01263 PF09115 DNA polymerase III, delta subunit, C terminal J158_01267 PF06506 Propionate catabolism activator J158_01267 PF00158 Sigma-54 interaction domain J158_01267 PF02954 Bacterial regulatory protein, Fis family J158_01269 PF00285 Citrate synthase, C-terminal domain J158_01270 PF00330 Aconitase family (aconitate hydratase) J158_01270 PF00694 Aconitase C-terminal domain J158_01271 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH J158_01273 PF04303 PrpF protein J158_01274 PF00593 TonB dependent receptor J158_01274 PF07715 TonB-dependent Receptor Plug Domain J158_01276 PF01835 MG2 domain J158_01276 PF17962 Bacterial macroglobulin domain 6 J158_01276 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain J158_01276 PF11974 Bacterial alpha-2-macroglobulin MG3 domain J158_01276 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain J158_01276 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain J158_01276 PF07703 Alpha-2-macroglobulin bait region domain J158_01276 PF00207 Alpha-2-macroglobulin family J158_01279 PF00905 Penicillin binding protein transpeptidase domain J158_01279 PF06832 Penicillin-Binding Protein C-terminus Family J158_01279 PF00912 Transglycosylase J158_01281 PF08534 Redoxin J158_01283 PF01556 DnaJ C terminal domain J158_01283 PF00226 DnaJ domain J158_01285 PF00072 Response regulator receiver domain J158_01287 PF01145 SPFH domain / Band 7 family J158_01287 PF12221 Bacterial membrane protein N terminal J158_01288 PF01145 SPFH domain / Band 7 family J158_01290 PF00709 Adenylosuccinate synthetase J158_01291 PF11838 ERAP1-like C-terminal domain J158_01291 PF01433 Peptidase family M1 domain J158_01294 PF00440 Bacterial regulatory proteins, tetR family J158_01307 PF13456 Reverse transcriptase-like J158_01307 PF00300 Histidine phosphatase superfamily (branch 1) J158_01308 PF01256 Carbohydrate kinase J158_01310 PF00723 Glycosyl hydrolases family 15 J158_01312 PF17678 Glycosyl hydrolase family 92 N-terminal domain J158_01312 PF07971 Glycosyl hydrolase family 92 J158_01316 PF07992 Pyridine nucleotide-disulphide oxidoreductase J158_01320 PF17755 UvrA DNA-binding domain J158_01321 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J158_01321 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J158_01322 PF03450 CO dehydrogenase flavoprotein C-terminal domain J158_01322 PF00941 FAD binding domain in molybdopterin dehydrogenase J158_01323 PF00111 2Fe-2S iron-sulfur cluster binding domain J158_01323 PF01799 [2Fe-2S] binding domain J158_01330 PF00717 Peptidase S24-like J158_01330 PF01726 LexA DNA binding domain J158_01333 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J158_01333 PF14579 Helix-hairpin-helix motif J158_01333 PF02811 PHP domain J158_01333 PF07733 Bacterial DNA polymerase III alpha NTPase domain J158_01334 PF00326 Prolyl oligopeptidase family J158_01336 PF03169 OPT oligopeptide transporter protein J158_01339 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J158_01339 PF00326 Prolyl oligopeptidase family J158_01339 PF07676 WD40-like Beta Propeller Repeat J158_01342 PF02311 AraC-like ligand binding domain J158_01342 PF12833 Helix-turn-helix domain J158_01347 PF18011 C-terminal domain found in long catalases J158_01347 PF00199 Catalase J158_01347 PF06628 Catalase-related immune-responsive J158_01348 PF00248 Aldo/keto reductase family J158_01349 PF00135 Carboxylesterase family J158_01350 PF02347 Glycine cleavage system P-protein J158_01353 PF07690 Major Facilitator Superfamily J158_01356 PF08019 Phosphoethanolamine transferase EptA/EptB J158_01356 PF00884 Sulfatase J158_01359 PF00072 Response regulator receiver domain J158_01359 PF00486 Transcriptional regulatory protein, C terminal J158_01360 PF00512 His Kinase A (phospho-acceptor) domain J158_01360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_01360 PF08521 Two-component sensor kinase N-terminal J158_01362 PF03776 Septum formation topological specificity factor MinE J158_01363 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J158_01364 PF05209 Septum formation inhibitor MinC, N-terminal domain J158_01364 PF03775 Septum formation inhibitor MinC, C-terminal domain J158_01366 PF07730 Histidine kinase J158_01367 PF00072 Response regulator receiver domain J158_01367 PF00196 Bacterial regulatory proteins, luxR family J158_01370 PF00730 HhH-GPD superfamily base excision DNA repair protein J158_01375 PF02222 ATP-grasp domain J158_01377 PF04377 Arginine-tRNA-protein transferase, C terminus J158_01377 PF04376 Arginine-tRNA-protein transferase, N terminus J158_01383 PF00378 Enoyl-CoA hydratase/isomerase J158_01386 PF00005 ABC transporter J158_01386 PF17755 UvrA DNA-binding domain J158_01386 PF17760 UvrA interaction domain J158_01387 PF00829 Ribosomal prokaryotic L21 protein J158_01388 PF01016 Ribosomal L27 protein J158_01389 PF01018 GTP1/OBG J158_01389 PF01926 50S ribosome-binding GTPase J158_01390 PF01649 Ribosomal protein S20 J158_01391 PF03023 Lipid II flippase MurJ J158_01392 PF06574 FAD synthetase J158_01392 PF01687 Riboflavin kinase J158_01393 PF06827 Zinc finger found in FPG and IleRS J158_01393 PF08264 Anticodon-binding domain of tRNA J158_01393 PF00133 tRNA synthetases class I (I, L, M and V) J158_01394 PF01252 Signal peptidase (SPase) II J158_01395 PF02401 LytB protein J158_01397 PF06481 COX Aromatic Rich Motif J158_01397 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J158_01398 PF00115 Cytochrome C and Quinol oxidase polypeptide I J158_01399 PF00510 Cytochrome c oxidase subunit III J158_01400 PF03626 Prokaryotic Cytochrome C oxidase subunit IV J158_01402 PF18073 Rubredoxin metal binding domain J158_01403 PF05656 Protein of unknown function (DUF805) J158_01405 PF12833 Helix-turn-helix domain J158_01406 PF00183 Hsp90 protein J158_01406 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_01408 PF08678 Rsbr N terminal J158_01408 PF01740 STAS domain J158_01409 PF01740 STAS domain J158_01410 PF13581 Histidine kinase-like ATPase domain J158_01412 PF00072 Response regulator receiver domain J158_01412 PF17149 Periplasmic sensor domain found in signal transduction proteins J158_01412 PF01627 Hpt domain J158_01412 PF00512 His Kinase A (phospho-acceptor) domain J158_01412 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_01412 PF00672 HAMP domain J158_01413 PF00072 Response regulator receiver domain J158_01413 PF00512 His Kinase A (phospho-acceptor) domain J158_01413 PF13188 PAS domain J158_01413 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_01413 PF08448 PAS fold J158_01414 PF04616 Glycosyl hydrolases family 43 J158_01414 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J158_01415 PF00593 TonB dependent receptor J158_01415 PF07715 TonB-dependent Receptor Plug Domain J158_01416 PF00085 Thioredoxin J158_01417 PF07237 Protein of unknown function (DUF1428) J158_01418 PF02702 Osmosensitive K+ channel His kinase sensor domain J158_01418 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_01418 PF13493 Domain of unknown function (DUF4118) J158_01418 PF13492 GAF domain J158_01418 PF00512 His Kinase A (phospho-acceptor) domain J158_01419 PF01339 CheB methylesterase J158_01420 PF00072 Response regulator receiver domain J158_01420 PF01627 Hpt domain J158_01420 PF00512 His Kinase A (phospho-acceptor) domain J158_01420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_01420 PF00672 HAMP domain J158_01420 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J158_01421 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_01421 PF00072 Response regulator receiver domain J158_01421 PF13426 PAS domain J158_01422 PF00072 Response regulator receiver domain J158_01423 PF00722 Glycosyl hydrolases family 16 J158_01424 PF06964 Alpha-L-arabinofuranosidase C-terminal domain J158_01425 PF01263 Aldose 1-epimerase J158_01426 PF01578 Cytochrome C assembly protein J158_01427 PF02881 SRP54-type protein, helical bundle domain J158_01427 PF02978 Signal peptide binding domain J158_01427 PF00448 SRP54-type protein, GTPase domain J158_01428 PF03060 Nitronate monooxygenase J158_01429 PF01063 Amino-transferase class IV J158_01430 PF00886 Ribosomal protein S16 J158_01431 PF05239 PRC-barrel domain J158_01431 PF01782 RimM N-terminal domain J158_01432 PF01746 tRNA (Guanine-1)-methyltransferase J158_01433 PF01245 Ribosomal protein L19 J158_01434 PF01554 MatE J158_01435 PF01554 MatE J158_01438 PF01479 S4 domain J158_01439 PF00141 Peroxidase J158_01441 PF00488 MutS domain V J158_01441 PF05190 MutS family domain IV J158_01441 PF05192 MutS domain III J158_01441 PF01624 MutS domain I J158_01441 PF05188 MutS domain II J158_01444 PF05593 RHS Repeat J158_01444 PF03527 RHS protein J158_01448 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 J158_01448 PF16355 Domain of unknown function (DUF4982) J158_01448 PF02837 Glycosyl hydrolases family 2, sugar binding domain J158_01448 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J158_01448 PF00703 Glycosyl hydrolases family 2 J158_01449 PF07745 Glycosyl hydrolase family 53 J158_01451 PF06114 IrrE N-terminal-like domain J158_01451 PF01381 Helix-turn-helix J158_01451 PF09856 Predicted transcriptional regulator (DUF2083) J158_01452 PF00171 Aldehyde dehydrogenase family J158_01453 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J158_01453 PF02770 Acyl-CoA dehydrogenase, middle domain J158_01453 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J158_01454 PF00378 Enoyl-CoA hydratase/isomerase J158_01455 PF00378 Enoyl-CoA hydratase/isomerase J158_01455 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J158_01455 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J158_01456 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J158_01456 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J158_01457 PF01545 Cation efflux family J158_01458 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J158_01458 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J158_01458 PF00378 Enoyl-CoA hydratase/isomerase J158_01459 PF04542 Sigma-70 region 2 J158_01459 PF08281 Sigma-70, region 4 J158_01461 PF13180 PDZ domain J158_01462 PF06421 GTP-binding protein LepA C-terminus J158_01462 PF00009 Elongation factor Tu GTP binding domain J158_01462 PF03144 Elongation factor Tu domain 2 J158_01462 PF00679 Elongation factor G C-terminus J158_01463 PF10502 Signal peptidase, peptidase S26 J158_01465 PF14622 Ribonuclease-III-like J158_01465 PF00035 Double-stranded RNA binding motif J158_01466 PF07650 KH domain J158_01466 PF01926 50S ribosome-binding GTPase J158_01467 PF02565 Recombination protein O C terminal J158_01467 PF11967 Recombination protein O N terminal J158_01469 PF05958 tRNA (Uracil-5-)-methyltransferase J158_01471 PF01323 DSBA-like thioredoxin domain J158_01472 PF01593 Flavin containing amine oxidoreductase J158_01473 PF04244 Deoxyribodipyrimidine photo-lyase-related protein J158_01474 PF00933 Glycosyl hydrolase family 3 N terminal domain J158_01476 PF01048 Phosphorylase superfamily J158_01477 PF00313 'Cold-shock' DNA-binding domain J158_01478 PF01494 FAD binding domain J158_01480 PF08494 DEAD/H associated J158_01480 PF00270 DEAD/DEAH box helicase J158_01480 PF00271 Helicase conserved C-terminal domain J158_01481 PF04675 DNA ligase N terminus J158_01481 PF04679 ATP dependent DNA ligase C terminal region J158_01481 PF01068 ATP dependent DNA ligase domain J158_01483 PF04679 ATP dependent DNA ligase C terminal region J158_01483 PF04675 DNA ligase N terminus J158_01483 PF01068 ATP dependent DNA ligase domain J158_01486 PF00990 Diguanylate cyclase, GGDEF domain J158_01486 PF00072 Response regulator receiver domain J158_01489 PF02803 Thiolase, C-terminal domain J158_01489 PF00108 Thiolase, N-terminal domain J158_01490 PF00082 Subtilase family J158_01490 PF12951 Passenger-associated-transport-repeat J158_01490 PF03797 Autotransporter beta-domain J158_01491 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J158_01491 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain J158_01493 PF01863 Protein of unknown function DUF45 J158_01494 PF07043 Protein of unknown function (DUF1328) J158_01496 PF01258 Prokaryotic dksA/traR C4-type zinc finger J158_01500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J158_01502 PF03831 PhnA domain J158_01502 PF08274 PhnA Zinc-Ribbon J158_01503 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J158_01504 PF07690 Major Facilitator Superfamily J158_01511 PF09924 Uncharacterised conserved protein (DUF2156) J158_01511 PF03706 Lysylphosphatidylglycerol synthase TM region J158_01514 PF01042 Endoribonuclease L-PSP J158_01523 PF04545 Sigma-70, region 4 J158_01523 PF04542 Sigma-70 region 2 J158_01526 PF04060 Putative Fe-S cluster J158_01528 PF09334 tRNA synthetases class I (M) J158_01528 PF01588 Putative tRNA binding domain J158_01531 PF13732 Domain of unknown function (DUF4162) J158_01531 PF00005 ABC transporter J158_01532 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J158_01533 PF00324 Amino acid permease J158_01534 PF02574 Homocysteine S-methyltransferase J158_01536 PF02592 Putative vitamin uptake transporter J158_01540 PF03551 Transcriptional regulator PadR-like family J158_01547 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit J158_01548 PF14579 Helix-hairpin-helix motif J158_01548 PF07733 Bacterial DNA polymerase III alpha NTPase domain J158_01548 PF02811 PHP domain J158_01548 PF01336 OB-fold nucleic acid binding domain J158_01548 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J158_01549 PF01351 Ribonuclease HII J158_01550 PF02684 Lipid-A-disaccharide synthetase J158_01551 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 J158_01551 PF00132 Bacterial transferase hexapeptide (six repeats) J158_01552 PF07977 FabA-like domain J158_01553 PF00132 Bacterial transferase hexapeptide (six repeats) J158_01553 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD J158_01555 PF01103 Surface antigen J158_01555 PF07244 Surface antigen variable number repeat J158_01556 PF17820 PDZ domain J158_01556 PF02163 Peptidase family M50 J158_01557 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain J158_01557 PF13288 DXP reductoisomerase C-terminal domain J158_01557 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase J158_01559 PF01255 Putative undecaprenyl diphosphate synthase J158_01560 PF01765 Ribosome recycling factor J158_01561 PF00696 Amino acid kinase family J158_01562 PF00072 Response regulator receiver domain J158_01562 PF00990 Diguanylate cyclase, GGDEF domain J158_01563 PF00889 Elongation factor TS J158_01564 PF00318 Ribosomal protein S2 J158_01571 PF00557 Metallopeptidase family M24 J158_01572 PF01909 Nucleotidyltransferase domain J158_01572 PF08335 GlnD PII-uridylyltransferase J158_01572 PF01966 HD domain J158_01573 PF14602 Hexapeptide repeat of succinyl-transferase J158_01573 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal J158_01573 PF00132 Bacterial transferase hexapeptide (six repeats) J158_01574 PF03960 ArsC family J158_01575 PF07687 Peptidase dimerisation domain J158_01575 PF01546 Peptidase family M20/M25/M40 J158_01576 PF13537 Glutamine amidotransferase domain J158_01576 PF00733 Asparagine synthase J158_01578 PF00593 TonB dependent receptor J158_01578 PF07715 TonB-dependent Receptor Plug Domain J158_01580 PF01804 Penicillin amidase J158_01581 PF00210 Ferritin-like domain J158_01582 PF05724 Thiopurine S-methyltransferase (TPMT) J158_01584 PF03989 DNA gyrase C-terminal domain, beta-propeller J158_01584 PF00521 DNA gyrase/topoisomerase IV, subunit A J158_01587 PF02321 Outer membrane efflux protein J158_01588 PF00529 HlyD membrane-fusion protein of T1SS J158_01588 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J158_01589 PF07690 Major Facilitator Superfamily J158_01591 PF00933 Glycosyl hydrolase family 3 N terminal domain J158_01591 PF14310 Fibronectin type III-like domain J158_01591 PF01915 Glycosyl hydrolase family 3 C-terminal domain J158_01593 PF00854 POT family J158_01598 PF12802 MarR family J158_01599 PF01432 Peptidase family M3 J158_01600 PF00255 Glutathione peroxidase J158_01601 PF00175 Oxidoreductase NAD-binding domain J158_01601 PF00970 Oxidoreductase FAD-binding domain J158_01602 PF00005 ABC transporter J158_01603 PF05683 Fumarase C-terminus J158_01603 PF05681 Fumarate hydratase (Fumerase) J158_01605 PF00484 Carbonic anhydrase J158_01606 PF02253 Phospholipase A1 J158_01608 PF00313 'Cold-shock' DNA-binding domain J158_01611 PF00899 ThiF family J158_01612 PF01026 TatD related DNase J158_01615 PF02770 Acyl-CoA dehydrogenase, middle domain J158_01615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J158_01615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J158_01617 PF00043 Glutathione S-transferase, C-terminal domain J158_01617 PF02798 Glutathione S-transferase, N-terminal domain J158_01618 PF13537 Glutamine amidotransferase domain J158_01618 PF00733 Asparagine synthase J158_01619 PF03358 NADPH-dependent FMN reductase J158_01620 PF00772 DnaB-like helicase N terminal domain J158_01620 PF03796 DnaB-like helicase C terminal domain J158_01621 PF00875 DNA photolyase J158_01621 PF03441 FAD binding domain of DNA photolyase J158_01622 PF05736 OprF membrane domain J158_01622 PF00691 OmpA family J158_01624 PF03466 LysR substrate binding domain J158_01624 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J158_01627 PF00529 HlyD membrane-fusion protein of T1SS J158_01627 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J158_01628 PF00873 AcrB/AcrD/AcrF family J158_01629 PF00106 short chain dehydrogenase J158_01630 PF02321 Outer membrane efflux protein J158_01631 PF00990 Diguanylate cyclase, GGDEF domain J158_01631 PF08448 PAS fold J158_01633 PF00990 Diguanylate cyclase, GGDEF domain J158_01650 PF01527 Transposase J158_01659 PF00082 Subtilase family J158_01660 PF01668 SmpB protein J158_01661 PF03364 Polyketide cyclase / dehydrase and lipid transport J158_01662 PF03658 RnfH family Ubiquitin J158_01663 PF04355 SmpA / OmlA family J158_01664 PF01475 Ferric uptake regulator family J158_01665 PF02463 RecF/RecN/SMC N terminal domain J158_01666 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding J158_01666 PF01628 HrcA protein C terminal domain J158_01667 PF01025 GrpE J158_01668 PF00012 Hsp70 protein J158_01669 PF00684 DnaJ central domain J158_01669 PF01556 DnaJ C terminal domain J158_01669 PF00226 DnaJ domain J158_01671 PF08543 Phosphomethylpyrimidine kinase J158_01676 PF00005 ABC transporter J158_01676 PF00664 ABC transporter transmembrane region J158_01676 PF03412 Peptidase C39 family J158_01677 PF03466 LysR substrate binding domain J158_01677 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J158_01678 PF00664 ABC transporter transmembrane region J158_01678 PF00005 ABC transporter J158_01679 PF01205 Uncharacterized protein family UPF0029 J158_01680 PF03641 Possible lysine decarboxylase J158_01681 PF07992 Pyridine nucleotide-disulphide oxidoreductase J158_01681 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J158_01682 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J158_01682 PF02817 e3 binding domain J158_01682 PF00364 Biotin-requiring enzyme J158_01683 PF16870 2-oxoglutarate dehydrogenase C-terminal J158_01683 PF16078 2-oxoglutarate dehydrogenase N-terminus J158_01683 PF02779 Transketolase, pyrimidine binding domain J158_01683 PF00676 Dehydrogenase E1 component J158_01685 PF08007 Cupin superfamily protein J158_01687 PF00206 Lyase J158_01687 PF08328 Adenylosuccinate lyase C-terminal J158_01689 PF01595 Cyclin M transmembrane N-terminal domain J158_01689 PF03471 Transporter associated domain J158_01689 PF00571 CBS domain J158_01690 PF00206 Lyase J158_01690 PF10415 Fumarase C C-terminus J158_01695 PF00005 ABC transporter J158_01696 PF00392 Bacterial regulatory proteins, gntR family J158_01698 PF00255 Glutathione peroxidase J158_01699 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J158_01699 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J158_01700 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J158_01700 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J158_01700 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J158_01701 PF04102 SlyX J158_01704 PF00356 Bacterial regulatory proteins, lacI family J158_01705 PF07690 Major Facilitator Superfamily J158_01706 PF00294 pfkB family carbohydrate kinase J158_01708 PF02574 Homocysteine S-methyltransferase J158_01708 PF00809 Pterin binding enzyme J158_01708 PF02965 Vitamin B12 dependent methionine synthase, activation domain J158_01708 PF02310 B12 binding domain J158_01708 PF02607 B12 binding domain J158_01709 PF02574 Homocysteine S-methyltransferase J158_01709 PF00809 Pterin binding enzyme J158_01710 PF01209 ubiE/COQ5 methyltransferase family J158_01711 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J158_01711 PF02770 Acyl-CoA dehydrogenase, middle domain J158_01711 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J158_01714 PF17876 Cold shock domain J158_01714 PF08461 Ribonuclease R winged-helix domain J158_01714 PF08206 Ribonuclease B OB domain J158_01714 PF00773 RNB domain J158_01714 PF00575 S1 RNA binding domain J158_01716 PF00588 SpoU rRNA Methylase family J158_01716 PF08032 RNA 2'-O ribose methyltransferase substrate binding J158_01717 PF07694 5TMR of 5TMR-LYT J158_01717 PF00990 Diguanylate cyclase, GGDEF domain J158_01718 PF00929 Exonuclease J158_01720 PF01895 PhoU domain J158_01721 PF00005 ABC transporter J158_01722 PF00528 Binding-protein-dependent transport system inner membrane component J158_01723 PF00528 Binding-protein-dependent transport system inner membrane component J158_01724 PF12849 PBP superfamily domain J158_01725 PF12849 PBP superfamily domain J158_01728 PF00484 Carbonic anhydrase J158_01729 PF01740 STAS domain J158_01729 PF00916 Sulfate permease family J158_01730 PF10576 Iron-sulfur binding domain of endonuclease III J158_01730 PF00633 Helix-hairpin-helix motif J158_01730 PF00730 HhH-GPD superfamily base excision DNA repair protein J158_01732 PF00378 Enoyl-CoA hydratase/isomerase J158_01733 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J158_01733 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J158_01734 PF00293 NUDIX domain J158_01735 PF00581 Rhodanese-like domain J158_01742 PF10672 S-adenosylmethionine-dependent methyltransferase J158_01742 PF02926 THUMP domain J158_01742 PF01170 Putative RNA methylase family UPF0020 J158_01743 PF01513 ATP-NAD kinase J158_01747 PF08411 Exonuclease C-terminal J158_01747 PF00929 Exonuclease J158_01748 PF01494 FAD binding domain J158_01749 PF00266 Aminotransferase class-V J158_01751 PF06052 3-hydroxyanthranilic acid dioxygenase J158_01752 PF00484 Carbonic anhydrase J158_01761 PF00072 Response regulator receiver domain J158_01761 PF00196 Bacterial regulatory proteins, luxR family J158_01764 PF04299 Putative FMN-binding domain J158_01768 PF01336 OB-fold nucleic acid binding domain J158_01768 PF00152 tRNA synthetases class II (D, K and N) J158_01769 PF01521 Iron-sulphur cluster biosynthesis J158_01770 PF01250 Ribosomal protein S6 J158_01771 PF01084 Ribosomal protein S18 J158_01772 PF03948 Ribosomal protein L9, C-terminal domain J158_01772 PF01281 Ribosomal protein L9, N-terminal domain J158_01773 PF02463 RecF/RecN/SMC N terminal domain J158_01774 PF04354 ZipA, C-terminal FtsZ-binding domain J158_01776 PF00155 Aminotransferase class I and II J158_01777 PF03119 NAD-dependent DNA ligase C4 zinc finger domain J158_01777 PF03120 NAD-dependent DNA ligase OB-fold domain J158_01777 PF01653 NAD-dependent DNA ligase adenylation domain J158_01777 PF12826 Helix-hairpin-helix motif J158_01777 PF00533 BRCA1 C Terminus (BRCT) domain J158_01778 PF00152 tRNA synthetases class II (D, K and N) J158_01780 PF01008 Initiation factor 2 subunit family J158_01781 PF03989 DNA gyrase C-terminal domain, beta-propeller J158_01781 PF00521 DNA gyrase/topoisomerase IV, subunit A J158_01782 PF13360 PQQ-like domain J158_01784 PF17391 Urocanase N-terminal domain J158_01784 PF17392 Urocanase C-terminal domain J158_01784 PF01175 Urocanase Rossmann-like domain J158_01786 PF00221 Aromatic amino acid lyase J158_01787 PF07969 Amidohydrolase family J158_01789 PF07702 UTRA domain J158_01789 PF00392 Bacterial regulatory proteins, gntR family J158_01795 PF01794 Ferric reductase like transmembrane component J158_01796 PF00174 Oxidoreductase molybdopterin binding domain J158_01797 PF00266 Aminotransferase class-V J158_01798 PF00800 Prephenate dehydratase J158_01798 PF01842 ACT domain J158_01798 PF01817 Chorismate mutase type II J158_01799 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J158_01801 PF03544 Gram-negative bacterial TonB protein C-terminal J158_01802 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J158_01802 PF02403 Seryl-tRNA synthetase N-terminal domain J158_01803 PF02525 Flavodoxin-like fold J158_01804 PF03466 LysR substrate binding domain J158_01804 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J158_01807 PF00672 HAMP domain J158_01807 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J158_01807 PF02203 Tar ligand binding domain homologue J158_01810 PF00072 Response regulator receiver domain J158_01810 PF13188 PAS domain J158_01810 PF08448 PAS fold J158_01810 PF00512 His Kinase A (phospho-acceptor) domain J158_01810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_01811 PF00072 Response regulator receiver domain J158_01811 PF00486 Transcriptional regulatory protein, C terminal J158_01812 PF06745 KaiC J158_01813 PF00072 Response regulator receiver domain J158_01813 PF13426 PAS domain J158_01813 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_01815 PF03918 Cytochrome C biogenesis protein J158_01816 PF08534 Redoxin J158_01817 PF01578 Cytochrome C assembly protein J158_01817 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal J158_01818 PF03100 CcmE J158_01820 PF01578 Cytochrome C assembly protein J158_01821 PF00082 Subtilase family J158_01823 PF08281 Sigma-70, region 4 J158_01823 PF04542 Sigma-70 region 2 J158_01826 PF00034 Cytochrome c J158_01829 PF05523 WxcM-like, C-terminal J158_01833 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J158_01834 PF01943 Polysaccharide biosynthesis protein J158_01835 PF00535 Glycosyl transferase family 2 J158_01838 PF08241 Methyltransferase domain J158_01842 PF13579 Glycosyl transferase 4-like domain J158_01842 PF00534 Glycosyl transferases group 1 J158_01845 PF00005 ABC transporter J158_01846 PF00005 ABC transporter J158_01846 PF00664 ABC transporter transmembrane region J158_01847 PF07690 Major Facilitator Superfamily J158_01848 PF00296 Luciferase-like monooxygenase J158_01851 PF03471 Transporter associated domain J158_01851 PF00571 CBS domain J158_01851 PF01595 Cyclin M transmembrane N-terminal domain J158_01853 PF01384 Phosphate transporter family J158_01856 PF01751 Toprim domain J158_01856 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_01856 PF00204 DNA gyrase B J158_01856 PF00986 DNA gyrase B subunit, carboxyl terminus J158_01858 PF00117 Glutamine amidotransferase class-I J158_01858 PF06418 CTP synthase N-terminus J158_01859 PF00793 DAHP synthetase I family J158_01861 PF03952 Enolase, N-terminal domain J158_01861 PF00113 Enolase, C-terminal TIM barrel domain J158_01862 PF04977 Septum formation initiator J158_01863 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase J158_01864 PF02542 YgbB family J158_01865 PF01142 tRNA pseudouridine synthase D (TruD) J158_01866 PF01713 Smr domain J158_01867 PF01975 Survival protein SurE J158_01869 PF09335 SNARE associated Golgi protein J158_01870 PF01551 Peptidase family M23 J158_01870 PF01476 LysM domain J158_01872 PF04430 Protein of unknown function (DUF498/DUF598) J158_01873 PF01985 CRS1 / YhbY (CRM) domain J158_01874 PF01728 FtsJ-like methyltransferase J158_01875 PF17862 AAA+ lid domain J158_01875 PF00004 ATPase family associated with various cellular activities (AAA) J158_01875 PF06480 FtsH Extracellular J158_01875 PF01434 Peptidase family M41 J158_01876 PF00809 Pterin binding enzyme J158_01878 PF17209 Hfq protein J158_01879 PF16360 GTP-binding GTPase Middle Region J158_01879 PF13167 GTP-binding GTPase N-terminal J158_01879 PF01926 50S ribosome-binding GTPase J158_01880 PF02464 Competence-damaged protein J158_01881 PF03109 ABC1 family J158_01882 PF01726 LexA DNA binding domain J158_01882 PF00717 Peptidase S24-like J158_01883 PF00154 recA bacterial DNA recombination protein J158_01884 PF02631 RecX family J158_01885 PF01411 tRNA synthetases class II (A) J158_01885 PF02272 DHHA1 domain J158_01885 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J158_01886 PF02599 Global regulator protein family J158_01888 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J158_01888 PF13426 PAS domain J158_01888 PF08447 PAS fold J158_01889 PF02678 Pirin J158_01889 PF17954 Quercetinase C-terminal cupin domain J158_01890 PF03466 LysR substrate binding domain J158_01890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J158_01895 PF08543 Phosphomethylpyrimidine kinase J158_01895 PF02581 Thiamine monophosphate synthase J158_01898 PF13638 PIN domain J158_01898 PF02562 PhoH-like protein J158_01899 PF00578 AhpC/TSA family J158_01902 PF00701 Dihydrodipicolinate synthetase family J158_01904 PF00037 4Fe-4S binding domain J158_01904 PF11953 Domain of unknown function (DUF3470) J158_01905 PF05035 2-keto-3-deoxy-galactonokinase J158_01906 PF08450 SMP-30/Gluconolactonase/LRE-like region J158_01907 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J158_01907 PF13378 Enolase C-terminal domain-like J158_01908 PF01081 KDPG and KHG aldolase J158_01910 PF03466 LysR substrate binding domain J158_01910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J158_01913 PF03442 Carbohydrate binding domain X2 J158_01913 PF00942 Cellulose binding domain J158_01916 PF16338 Domain of unknown function (DUF4968) J158_01916 PF17137 Domain of unknown function (DUF5110) J158_01916 PF01055 Glycosyl hydrolases family 31 J158_01918 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J158_01918 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J158_01920 PF00083 Sugar (and other) transporter J158_01923 PF01520 N-acetylmuramoyl-L-alanine amidase J158_01924 PF02649 Type I GTP cyclohydrolase folE2 J158_01928 PF01743 Poly A polymerase head domain J158_01928 PF12627 Probable RNA and SrmB- binding site of polymerase A J158_01928 PF12626 Polymerase A arginine-rich C-terminus J158_01929 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J158_01930 PF02548 Ketopantoate hydroxymethyltransferase J158_01931 PF02569 Pantoate-beta-alanine ligase J158_01932 PF02261 Aspartate decarboxylase J158_01933 PF00342 Phosphoglucose isomerase J158_01937 PF01915 Glycosyl hydrolase family 3 C-terminal domain J158_01937 PF00933 Glycosyl hydrolase family 3 N terminal domain J158_01937 PF14310 Fibronectin type III-like domain J158_01938 PF00474 Sodium:solute symporter family J158_01939 PF00990 Diguanylate cyclase, GGDEF domain J158_01939 PF00563 EAL domain J158_01939 PF00360 Phytochrome region J158_01939 PF01590 GAF domain J158_01940 PF00150 Cellulase (glycosyl hydrolase family 5) J158_01940 PF02013 Cellulose or protein binding domain J158_01941 PF00072 Response regulator receiver domain J158_01943 PF04551 GcpE protein J158_01944 PF01569 PAP2 superfamily J158_01945 PF07690 Major Facilitator Superfamily J158_01946 PF01177 Asp/Glu/Hydantoin racemase J158_01947 PF00892 EamA-like transporter family J158_01948 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain J158_01948 PF01565 FAD binding domain J158_01949 PF01180 Dihydroorotate dehydrogenase J158_01952 PF00171 Aldehyde dehydrogenase family J158_01955 PF00535 Glycosyl transferase family 2 J158_01956 PF01522 Polysaccharide deacetylase J158_01956 PF14883 Hypothetical glycosyl hydrolase family 13 J158_01958 PF08479 POTRA domain, ShlB-type J158_01958 PF17287 POTRA domain J158_01958 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB J158_01959 PF05594 Haemagluttinin repeat J158_01959 PF04829 Pre-toxin domain with VENN motif J158_01959 PF13332 Hemagglutinin repeat J158_01960 PF04829 Pre-toxin domain with VENN motif J158_01960 PF05594 Haemagluttinin repeat J158_01960 PF13332 Hemagglutinin repeat J158_01962 PF05594 Haemagluttinin repeat J158_01962 PF13332 Hemagglutinin repeat J158_01962 PF13018 Extended Signal Peptide of Type V secretion system J158_01962 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain J158_01962 PF05860 haemagglutination activity domain J158_01964 PF13840 ACT domain J158_01964 PF00742 Homoserine dehydrogenase J158_01964 PF03447 Homoserine dehydrogenase, NAD binding domain J158_01964 PF00696 Amino acid kinase family J158_01964 PF01842 ACT domain J158_01965 PF08544 GHMP kinases C terminal J158_01965 PF00288 GHMP kinases N terminal domain J158_01967 PF00291 Pyridoxal-phosphate dependent enzyme J158_01967 PF14821 Threonine synthase N terminus J158_01969 PF00027 Cyclic nucleotide-binding domain J158_01969 PF13545 Crp-like helix-turn-helix domain J158_01970 PF03129 Anticodon binding domain J158_01970 PF13393 Histidyl-tRNA synthetase J158_01972 PF01634 ATP phosphoribosyltransferase J158_01972 PF08029 HisG, C-terminal domain J158_01973 PF00815 Histidinol dehydrogenase J158_01974 PF00155 Aminotransferase class I and II J158_01975 PF00475 Imidazoleglycerol-phosphate dehydratase J158_01976 PF00117 Glutamine amidotransferase class-I J158_01977 PF00977 Histidine biosynthesis protein J158_01978 PF00977 Histidine biosynthesis protein J158_01979 PF01502 Phosphoribosyl-AMP cyclohydrolase J158_01979 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase J158_01983 PF03079 ARD/ARD' family J158_01984 PF00596 Class II Aldolase and Adducin N-terminal domain J158_01985 PF13520 Amino acid permease J158_01986 PF13520 Amino acid permease J158_01988 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J158_01988 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J158_01988 PF01842 ACT domain J158_01989 PF02913 FAD linked oxidases, C-terminal domain J158_01989 PF01565 FAD binding domain J158_01993 PF01132 Elongation factor P (EF-P) OB domain J158_01993 PF09285 Elongation factor P, C-terminal J158_01993 PF08207 Elongation factor P (EF-P) KOW-like domain J158_01994 PF00106 short chain dehydrogenase J158_01995 PF00682 HMGL-like J158_01997 PF00378 Enoyl-CoA hydratase/isomerase J158_01999 PF07664 Ferrous iron transport protein B C terminus J158_01999 PF07670 Nucleoside recognition J158_01999 PF02421 Ferrous iron transport protein B J158_02002 PF00155 Aminotransferase class I and II J158_02003 PF03473 MOSC domain J158_02003 PF03475 3-alpha domain J158_02004 PF01113 Dihydrodipicolinate reductase, N-terminus J158_02004 PF05173 Dihydrodipicolinate reductase, C-terminus J158_02005 PF00117 Glutamine amidotransferase class-I J158_02005 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain J158_02007 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J158_02007 PF02142 MGS-like domain J158_02007 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J158_02008 PF03449 Transcription elongation factor, N-terminal J158_02008 PF01272 Transcription elongation factor, GreA/GreB, C-term J158_02010 PF01368 DHH family J158_02010 PF17768 RecJ OB domain J158_02010 PF02272 DHHA1 domain J158_02018 PF04397 LytTr DNA-binding domain J158_02018 PF00072 Response regulator receiver domain J158_02019 PF03462 PCRF domain J158_02019 PF00472 RF-1 domain J158_02020 PF01336 OB-fold nucleic acid binding domain J158_02020 PF00152 tRNA synthetases class II (D, K and N) J158_02021 PF00072 Response regulator receiver domain J158_02022 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_02022 PF00512 His Kinase A (phospho-acceptor) domain J158_02022 PF00072 Response regulator receiver domain J158_02022 PF01627 Hpt domain J158_02023 PF00378 Enoyl-CoA hydratase/isomerase J158_02024 PF13193 AMP-binding enzyme C-terminal domain J158_02024 PF00501 AMP-binding enzyme J158_02026 PF00330 Aconitase family (aconitate hydratase) J158_02026 PF00694 Aconitase C-terminal domain J158_02029 PF06434 Aconitate hydratase 2 N-terminus J158_02029 PF00330 Aconitase family (aconitate hydratase) J158_02029 PF11791 Aconitate B N-terminal domain J158_02030 PF00561 alpha/beta hydrolase fold J158_02031 PF00563 EAL domain J158_02031 PF00990 Diguanylate cyclase, GGDEF domain J158_02031 PF03707 Bacterial signalling protein N terminal repeat J158_02032 PF00072 Response regulator receiver domain J158_02032 PF01339 CheB methylesterase J158_02033 PF03975 CheD chemotactic sensory transduction J158_02034 PF01739 CheR methyltransferase, SAM binding domain J158_02034 PF03705 CheR methyltransferase, all-alpha domain J158_02035 PF02203 Tar ligand binding domain homologue J158_02035 PF00672 HAMP domain J158_02035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J158_02036 PF00672 HAMP domain J158_02036 PF02203 Tar ligand binding domain homologue J158_02036 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J158_02037 PF00672 HAMP domain J158_02037 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J158_02037 PF02203 Tar ligand binding domain homologue J158_02038 PF02203 Tar ligand binding domain homologue J158_02038 PF00672 HAMP domain J158_02038 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J158_02039 PF02203 Tar ligand binding domain homologue J158_02039 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J158_02039 PF00672 HAMP domain J158_02040 PF00672 HAMP domain J158_02040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J158_02040 PF02203 Tar ligand binding domain homologue J158_02041 PF00672 HAMP domain J158_02041 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J158_02041 PF02203 Tar ligand binding domain homologue J158_02044 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J158_02044 PF00672 HAMP domain J158_02044 PF02203 Tar ligand binding domain homologue J158_02045 PF17200 Single Cache domain 2 J158_02045 PF00672 HAMP domain J158_02045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J158_02045 PF00672 HAMP domain J158_02045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J158_02045 PF17200 Single Cache domain 2 J158_02047 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J158_02047 PF02203 Tar ligand binding domain homologue J158_02047 PF00672 HAMP domain J158_02048 PF01584 CheW-like domain J158_02048 PF09078 CheY binding J158_02048 PF02895 Signal transducing histidine kinase, homodimeric domain J158_02048 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_02048 PF01627 Hpt domain J158_02049 PF00072 Response regulator receiver domain J158_02051 PF01584 CheW-like domain J158_02052 PF13614 AAA domain J158_02053 PF00691 OmpA family J158_02053 PF13677 Membrane MotB of proton-channel complex MotA/MotB J158_02054 PF01618 MotA/TolQ/ExbB proton channel family J158_02057 PF03793 PASTA domain J158_02057 PF00069 Protein kinase domain J158_02066 PF13276 HTH-like domain J158_02066 PF00665 Integrase core domain J158_02066 PF13333 Integrase core domain J158_02067 PF01527 Transposase J158_02073 PF04055 Radical SAM superfamily J158_02073 PF13186 Iron-sulfur cluster-binding domain J158_02076 PF02895 Signal transducing histidine kinase, homodimeric domain J158_02076 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_02076 PF01627 Hpt domain J158_02076 PF07194 P2 response regulator binding domain J158_02076 PF01584 CheW-like domain J158_02077 PF04344 Chemotaxis phosphatase, CheZ J158_02078 PF00072 Response regulator receiver domain J158_02079 PF04545 Sigma-70, region 4 J158_02079 PF04539 Sigma-70 region 3 J158_02079 PF04542 Sigma-70 region 2 J158_02080 PF10609 NUBPL iron-transfer P-loop NTPase J158_02081 PF00448 SRP54-type protein, GTPase domain J158_02082 PF00771 FHIPEP family J158_02083 PF01312 FlhB HrpN YscU SpaS Family J158_02084 PF00563 EAL domain J158_02084 PF00990 Diguanylate cyclase, GGDEF domain J158_02084 PF03707 Bacterial signalling protein N terminal repeat J158_02085 PF13188 PAS domain J158_02085 PF00563 EAL domain J158_02085 PF00990 Diguanylate cyclase, GGDEF domain J158_02085 PF03707 Bacterial signalling protein N terminal repeat J158_02086 PF00990 Diguanylate cyclase, GGDEF domain J158_02086 PF03707 Bacterial signalling protein N terminal repeat J158_02086 PF00563 EAL domain J158_02086 PF13188 PAS domain J158_02087 PF01311 Bacterial export proteins, family 1 J158_02088 PF01313 Bacterial export proteins, family 3 J158_02090 PF00813 FliP family J158_02091 PF04347 Flagellar biosynthesis protein, FliO J158_02092 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J158_02093 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J158_02093 PF02154 Flagellar motor switch protein FliM J158_02097 PF18269 T3SS EscN ATPase C-terminal domain J158_02097 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J158_02099 PF14841 FliG middle domain J158_02099 PF14842 FliG N-terminal domain J158_02099 PF01706 FliG C-terminal domain J158_02100 PF01514 Secretory protein of YscJ/FliF family J158_02100 PF08345 Flagellar M-ring protein C-terminal J158_02101 PF02049 Flagellar hook-basal body complex protein FliE J158_02102 PF00535 Glycosyl transferase family 2 J158_02102 PF00534 Glycosyl transferases group 1 J158_02110 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J158_02110 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J158_02112 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J158_02113 PF00158 Sigma-54 interaction domain J158_02113 PF00072 Response regulator receiver domain J158_02113 PF02954 Bacterial regulatory protein, Fis family J158_02114 PF01339 CheB methylesterase J158_02114 PF00072 Response regulator receiver domain J158_02115 PF04552 Sigma-54, DNA binding domain J158_02115 PF00309 Sigma-54 factor, Activator interacting domain (AID) J158_02115 PF04963 Sigma-54 factor, core binding domain J158_02116 PF00072 Response regulator receiver domain J158_02116 PF00196 Bacterial regulatory proteins, luxR family J158_02119 PF02561 Flagellar protein FliS J158_02120 PF02465 Flagellar hook-associated protein 2 N-terminus J158_02120 PF07195 Flagellar hook-associated protein 2 C-terminus J158_02120 PF07196 Flagellin hook IN motif J158_02121 PF00669 Bacterial flagellin N-terminal helical region J158_02121 PF00700 Bacterial flagellin C-terminal helical region J158_02122 PF00669 Bacterial flagellin N-terminal helical region J158_02122 PF00700 Bacterial flagellin C-terminal helical region J158_02123 PF07196 Flagellin hook IN motif J158_02123 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J158_02124 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase J158_02124 PF10135 Rod binding protein J158_02125 PF02119 Flagellar P-ring protein J158_02126 PF02107 Flagellar L-ring protein J158_02127 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J158_02127 PF00460 Flagella basal body rod protein J158_02128 PF00460 Flagella basal body rod protein J158_02128 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J158_02129 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J158_02129 PF07559 Flagellar basal body protein FlaE J158_02129 PF00460 Flagella basal body rod protein J158_02130 PF03963 Flagellar hook capping protein - N-terminal region J158_02131 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J158_02131 PF00460 Flagella basal body rod protein J158_02133 PF00072 Response regulator receiver domain J158_02133 PF01584 CheW-like domain J158_02137 PF13426 PAS domain J158_02137 PF00512 His Kinase A (phospho-acceptor) domain J158_02137 PF13188 PAS domain J158_02137 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_02137 PF00989 PAS fold J158_02138 PF00990 Diguanylate cyclase, GGDEF domain J158_02138 PF00563 EAL domain J158_02138 PF03707 Bacterial signalling protein N terminal repeat J158_02139 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_02139 PF07730 Histidine kinase J158_02140 PF00563 EAL domain J158_02140 PF00990 Diguanylate cyclase, GGDEF domain J158_02140 PF03707 Bacterial signalling protein N terminal repeat J158_02142 PF12729 Four helix bundle sensory module for signal transduction J158_02142 PF00672 HAMP domain J158_02142 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J158_02143 PF04356 Protein of unknown function (DUF489) J158_02145 PF00293 NUDIX domain J158_02146 PF02617 ATP-dependent Clp protease adaptor protein ClpS J158_02147 PF10431 C-terminal, D2-small domain, of ClpB protein J158_02147 PF02861 Clp amino terminal domain, pathogenicity island component J158_02147 PF17871 AAA lid domain J158_02147 PF07724 AAA domain (Cdc48 subfamily) J158_02147 PF00004 ATPase family associated with various cellular activities (AAA) J158_02148 PF01176 Translation initiation factor 1A / IF-1 J158_02149 PF03588 Leucyl/phenylalanyl-tRNA protein transferase J158_02151 PF07992 Pyridine nucleotide-disulphide oxidoreductase J158_02152 PF01580 FtsK/SpoIIIE family J158_02152 PF09397 Ftsk gamma domain J158_02152 PF17854 FtsK alpha domain J158_02152 PF13491 4TM region of DNA translocase FtsK/SpoIIIE J158_02154 PF03548 Outer membrane lipoprotein carrier protein LolA J158_02156 PF12002 MgsA AAA+ ATPase C terminal J158_02156 PF00004 ATPase family associated with various cellular activities (AAA) J158_02156 PF16193 AAA C-terminal domain J158_02158 PF02537 CrcB-like protein, Camphor Resistance (CrcB) J158_02160 PF00108 Thiolase, N-terminal domain J158_02160 PF02803 Thiolase, C-terminal domain J158_02161 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J158_02161 PF00378 Enoyl-CoA hydratase/isomerase J158_02161 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J158_02163 PF00334 Nucleoside diphosphate kinase J158_02164 PF04055 Radical SAM superfamily J158_02166 PF13464 Domain of unknown function (DUF4115) J158_02168 PF01011 PQQ enzyme repeat J158_02168 PF13360 PQQ-like domain J158_02169 PF01926 50S ribosome-binding GTPase J158_02169 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal J158_02170 PF03453 MoeA N-terminal region (domain I and II) J158_02170 PF03454 MoeA C-terminal region (domain IV) J158_02170 PF00994 Probable molybdopterin binding domain J158_02171 PF00899 ThiF family J158_02176 PF13823 Alcohol dehydrogenase GroES-associated J158_02176 PF08240 Alcohol dehydrogenase GroES-like domain J158_02176 PF00107 Zinc-binding dehydrogenase J158_02178 PF03372 Endonuclease/Exonuclease/phosphatase family J158_02180 PF00994 Probable molybdopterin binding domain J158_02180 PF03453 MoeA N-terminal region (domain I and II) J158_02180 PF03454 MoeA C-terminal region (domain IV) J158_02181 PF12804 MobA-like NTP transferase domain J158_02183 PF00561 alpha/beta hydrolase fold J158_02184 PF01566 Natural resistance-associated macrophage protein J158_02185 PF02742 Iron dependent repressor, metal binding and dimerisation domain J158_02185 PF01325 Iron dependent repressor, N-terminal DNA binding domain J158_02186 PF14437 MafB19-like deaminase J158_02187 PF00929 Exonuclease J158_02188 PF05552 Conserved TM helix J158_02188 PF00924 Mechanosensitive ion channel J158_02189 PF00391 PEP-utilising enzyme, mobile domain J158_02189 PF02896 PEP-utilising enzyme, TIM barrel domain J158_02189 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain J158_02190 PF03618 Kinase/pyrophosphorylase J158_02194 PF01066 CDP-alcohol phosphatidyltransferase J158_02196 PF00561 alpha/beta hydrolase fold J158_02199 PF00355 Rieske [2Fe-2S] domain J158_02199 PF01266 FAD dependent oxidoreductase J158_02201 PF16921 Tex protein YqgF-like domain J158_02201 PF09371 Tex-like protein N-terminal domain J158_02201 PF00575 S1 RNA binding domain J158_02201 PF17674 HHH domain J158_02202 PF00512 His Kinase A (phospho-acceptor) domain J158_02202 PF00072 Response regulator receiver domain J158_02202 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_02202 PF09308 LuxQ, periplasmic J158_02210 PF00034 Cytochrome c J158_02212 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J158_02213 PF00873 AcrB/AcrD/AcrF family J158_02214 PF00873 AcrB/AcrD/AcrF family J158_02215 PF01081 KDPG and KHG aldolase J158_02216 PF00920 Dehydratase family J158_02217 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase J158_02218 PF02685 Glucokinase J158_02219 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J158_02219 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J158_02220 PF00005 ABC transporter J158_02220 PF17912 MalK OB fold domain J158_02223 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J158_02224 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J158_02225 PF00890 FAD binding domain J158_02225 PF02910 Fumarate reductase flavoprotein C-term J158_02227 PF13085 2Fe-2S iron-sulfur cluster binding domain J158_02228 PF03937 Flavinator of succinate dehydrogenase J158_02230 PF12704 MacB-like periplasmic core domain J158_02230 PF02687 FtsX-like permease family J158_02231 PF00005 ABC transporter J158_02233 PF00753 Metallo-beta-lactamase superfamily J158_02233 PF03772 Competence protein J158_02234 PF01618 MotA/TolQ/ExbB proton channel family J158_02236 PF00005 ABC transporter J158_02236 PF00664 ABC transporter transmembrane region J158_02237 PF02606 Tetraacyldisaccharide-1-P 4'-kinase J158_02238 PF02348 Cytidylyltransferase J158_02239 PF01451 Low molecular weight phosphotyrosine protein phosphatase J158_02241 PF01541 GIY-YIG catalytic domain J158_02241 PF02151 UvrB/uvrC motif J158_02241 PF08459 UvrC Helix-hairpin-helix N-terminal J158_02242 PF01066 CDP-alcohol phosphatidyltransferase J158_02246 PF00501 AMP-binding enzyme J158_02246 PF13193 AMP-binding enzyme C-terminal domain J158_02246 PF00668 Condensation domain J158_02246 PF00550 Phosphopantetheine attachment site J158_02247 PF00501 AMP-binding enzyme J158_02247 PF00975 Thioesterase domain J158_02247 PF13193 AMP-binding enzyme C-terminal domain J158_02247 PF00668 Condensation domain J158_02247 PF00550 Phosphopantetheine attachment site J158_02249 PF01527 Transposase J158_02251 PF01527 Transposase J158_02252 PF00589 Phage integrase family J158_02254 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J158_02254 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J158_02254 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J158_02256 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J158_02259 PF00196 Bacterial regulatory proteins, luxR family J158_02259 PF00072 Response regulator receiver domain J158_02260 PF00575 S1 RNA binding domain J158_02260 PF10150 Ribonuclease E/G family J158_02260 PF12111 Polyribonucleotide phosphorylase C terminal J158_02261 PF00849 RNA pseudouridylate synthase J158_02261 PF01479 S4 domain J158_02262 PF11737 Protein of unknown function (DUF3300) J158_02263 PF02535 ZIP Zinc transporter J158_02265 PF01329 Pterin 4 alpha carbinolamine dehydratase J158_02266 PF01106 NifU-like domain J158_02275 PF08241 Methyltransferase domain J158_02275 PF12697 Alpha/beta hydrolase family J158_02277 PF00106 short chain dehydrogenase J158_02281 PF13333 Integrase core domain J158_02281 PF00665 Integrase core domain J158_02281 PF13276 HTH-like domain J158_02282 PF01527 Transposase J158_02283 PF01494 FAD binding domain J158_02284 PF09335 SNARE associated Golgi protein J158_02286 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J158_02287 PF07995 Glucose / Sorbosone dehydrogenase J158_02289 PF00144 Beta-lactamase J158_02290 PF04397 LytTr DNA-binding domain J158_02290 PF00072 Response regulator receiver domain J158_02291 PF06580 Histidine kinase J158_02291 PF07694 5TMR of 5TMR-LYT J158_02291 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_02293 PF00082 Subtilase family J158_02293 PF03797 Autotransporter beta-domain J158_02294 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J158_02295 PF00873 AcrB/AcrD/AcrF family J158_02297 PF13426 PAS domain J158_02297 PF00072 Response regulator receiver domain J158_02297 PF08448 PAS fold J158_02297 PF00512 His Kinase A (phospho-acceptor) domain J158_02297 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_02298 PF00196 Bacterial regulatory proteins, luxR family J158_02298 PF00072 Response regulator receiver domain J158_02299 PF12951 Passenger-associated-transport-repeat J158_02299 PF12951 Passenger-associated-transport-repeat J158_02300 PF00563 EAL domain J158_02300 PF00990 Diguanylate cyclase, GGDEF domain J158_02300 PF08447 PAS fold J158_02300 PF08448 PAS fold J158_02303 PF05974 Domain of unknown function (DUF892) J158_02305 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J158_02307 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J158_02307 PF14824 Sirohaem biosynthesis protein central J158_02307 PF10414 Sirohaem synthase dimerisation region J158_02310 PF05977 Transmembrane secretion effector J158_02311 PF07969 Amidohydrolase family J158_02313 PF00857 Isochorismatase family J158_02316 PF00196 Bacterial regulatory proteins, luxR family J158_02316 PF00072 Response regulator receiver domain J158_02319 PF03466 LysR substrate binding domain J158_02319 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J158_02320 PF00361 Proton-conducting membrane transporter J158_02320 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus J158_02320 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J158_02321 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) J158_02322 PF13333 Integrase core domain J158_02322 PF00665 Integrase core domain J158_02322 PF13276 HTH-like domain J158_02323 PF01527 Transposase J158_02324 PF01381 Helix-turn-helix J158_02325 PF05284 Protein of unknown function (DUF736) J158_02327 PF04002 RadC-like JAB domain J158_02332 PF00589 Phage integrase family J158_02332 PF13356 Arm DNA-binding domain J158_02335 PF00593 TonB dependent receptor J158_02335 PF07715 TonB-dependent Receptor Plug Domain J158_02339 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin J158_02344 PF07715 TonB-dependent Receptor Plug Domain J158_02344 PF00593 TonB dependent receptor J158_02347 PF10947 Protein of unknown function (DUF2628) J158_02349 PF00722 Glycosyl hydrolases family 16 J158_02349 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) J158_02354 PF03412 Peptidase C39 family J158_02354 PF00664 ABC transporter transmembrane region J158_02354 PF00005 ABC transporter J158_02356 PF13614 AAA domain J158_02364 PF01131 DNA topoisomerase J158_02364 PF01751 Toprim domain J158_02365 PF01751 Toprim domain J158_02365 PF01131 DNA topoisomerase J158_02366 PF00145 C-5 cytosine-specific DNA methylase J158_02378 PF06250 YhcG PDDEXK nuclease domain J158_02378 PF17761 DUF1016 N-terminal domain J158_02379 PF01527 Transposase J158_02380 PF13276 HTH-like domain J158_02380 PF00665 Integrase core domain J158_02380 PF13333 Integrase core domain J158_02381 PF00892 EamA-like transporter family J158_02382 PF00892 EamA-like transporter family J158_02384 PF02525 Flavodoxin-like fold J158_02385 PF02798 Glutathione S-transferase, N-terminal domain J158_02385 PF00043 Glutathione S-transferase, C-terminal domain J158_02386 PF05544 Proline racemase J158_02387 PF03358 NADPH-dependent FMN reductase J158_02389 PF07690 Major Facilitator Superfamily J158_02390 PF02311 AraC-like ligand binding domain J158_02390 PF12833 Helix-turn-helix domain J158_02420 PF12462 DNA helicase IV / RNA helicase N terminal J158_02420 PF00580 UvrD/REP helicase N-terminal domain J158_02420 PF13361 UvrD-like helicase C-terminal domain J158_02435 PF03466 LysR substrate binding domain J158_02435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J158_02436 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J158_02436 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J158_02437 PF03401 Tripartite tricarboxylate transporter family receptor J158_02441 PF04002 RadC-like JAB domain J158_02448 PF00589 Phage integrase family J158_02448 PF13356 Arm DNA-binding domain J158_02449 PF02540 NAD synthase J158_02449 PF00117 Glutamine amidotransferase class-I J158_02449 PF00958 GMP synthase C terminal domain J158_02450 PF00478 IMP dehydrogenase / GMP reductase domain J158_02450 PF00571 CBS domain J158_02451 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain J158_02451 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain J158_02453 PF00999 Sodium/hydrogen exchanger family J158_02453 PF02254 TrkA-N domain J158_02454 PF00483 Nucleotidyl transferase J158_02455 PF02719 Polysaccharide biosynthesis protein J158_02456 PF00953 Glycosyl transferase family 4 J158_02457 PF18073 Rubredoxin metal binding domain J158_02459 PF00216 Bacterial DNA-binding protein J158_02460 PF00575 S1 RNA binding domain J158_02461 PF02224 Cytidylate kinase J158_02462 PF00444 Ribosomal protein L36 J158_02465 PF04371 Porphyromonas-type peptidyl-arginine deiminase J158_02466 PF00795 Carbon-nitrogen hydrolase J158_02471 PF00528 Binding-protein-dependent transport system inner membrane component J158_02472 PF00528 Binding-protein-dependent transport system inner membrane component J158_02476 PF00356 Bacterial regulatory proteins, lacI family J158_02478 PF03795 YCII-related domain J158_02479 PF02616 Segregation and condensation protein ScpA J158_02480 PF04079 Segregation and condensation complex subunit ScpB J158_02481 PF00849 RNA pseudouridylate synthase J158_02481 PF01479 S4 domain J158_02484 PF00795 Carbon-nitrogen hydrolase J158_02485 PF00155 Aminotransferase class I and II J158_02486 PF00005 ABC transporter J158_02487 PF03379 CcmB protein J158_02488 PF01578 Cytochrome C assembly protein J158_02490 PF03100 CcmE J158_02491 PF01578 Cytochrome C assembly protein J158_02491 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal J158_02492 PF08534 Redoxin J158_02493 PF03918 Cytochrome C biogenesis protein J158_02495 PF00561 alpha/beta hydrolase fold J158_02496 PF00313 'Cold-shock' DNA-binding domain J158_02497 PF00664 ABC transporter transmembrane region J158_02497 PF00005 ABC transporter J158_02498 PF00664 ABC transporter transmembrane region J158_02498 PF00005 ABC transporter J158_02499 PF01654 Cytochrome bd terminal oxidase subunit I J158_02500 PF02322 Cytochrome bd terminal oxidase subunit II J158_02504 PF02129 X-Pro dipeptidyl-peptidase (S15 family) J158_02504 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain J158_02505 PF00171 Aldehyde dehydrogenase family J158_02506 PF00696 Amino acid kinase family J158_02506 PF01472 PUA domain J158_02508 PF00206 Lyase J158_02509 PF01118 Semialdehyde dehydrogenase, NAD binding domain J158_02511 PF00696 Amino acid kinase family J158_02511 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase J158_02514 PF00764 Arginosuccinate synthase J158_02515 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J158_02515 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J158_02517 PF01406 tRNA synthetases class I (C) catalytic domain J158_02517 PF09190 DALR domain J158_02518 PF02657 Fe-S metabolism associated domain J158_02520 PF01258 Prokaryotic dksA/traR C4-type zinc finger J158_02521 PF01809 Putative membrane protein insertion efficiency factor J158_02522 PF01979 Amidohydrolase family J158_02523 PF08460 Bacterial SH3 domain J158_02523 PF01551 Peptidase family M23 J158_02526 PF06751 Ethanolamine ammonia lyase large subunit (EutB) J158_02527 PF05985 Ethanolamine ammonia-lyase light chain (EutC) J158_02529 PF00753 Metallo-beta-lactamase superfamily J158_02533 PF01527 Transposase J158_02536 PF00295 Glycosyl hydrolases family 28 J158_02538 PF13419 Haloacid dehalogenase-like hydrolase J158_02540 PF01979 Amidohydrolase family J158_02542 PF08207 Elongation factor P (EF-P) KOW-like domain J158_02542 PF01132 Elongation factor P (EF-P) OB domain J158_02542 PF09285 Elongation factor P, C-terminal J158_02543 PF04055 Radical SAM superfamily J158_02544 PF00990 Diguanylate cyclase, GGDEF domain J158_02544 PF00563 EAL domain J158_02544 PF13188 PAS domain J158_02544 PF03707 Bacterial signalling protein N terminal repeat J158_02546 PF00588 SpoU rRNA Methylase family J158_02547 PF00459 Inositol monophosphatase family J158_02548 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J158_02548 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J158_02549 PF00545 ribonuclease J158_02552 PF03880 DbpA RNA binding domain J158_02552 PF00271 Helicase conserved C-terminal domain J158_02552 PF00270 DEAD/DEAH box helicase J158_02553 PF00156 Phosphoribosyl transferase domain J158_02554 PF02696 Uncharacterized ACR, YdiU/UPF0061 family J158_02555 PF00135 Carboxylesterase family J158_02556 PF14497 Glutathione S-transferase, C-terminal domain J158_02556 PF02798 Glutathione S-transferase, N-terminal domain J158_02557 PF00313 'Cold-shock' DNA-binding domain J158_02558 PF07152 YaeQ protein J158_02560 PF00072 Response regulator receiver domain J158_02560 PF00990 Diguanylate cyclase, GGDEF domain J158_02560 PF00563 EAL domain J158_02561 PF01435 Peptidase family M48 J158_02562 PF00749 tRNA synthetases class I (E and Q), catalytic domain J158_02563 PF00106 short chain dehydrogenase J158_02564 PF05233 PHB accumulation regulatory domain J158_02564 PF07879 PHB/PHA accumulation regulator DNA-binding domain J158_02567 PF08676 MutL C terminal dimerisation domain J158_02567 PF01119 DNA mismatch repair protein, C-terminal domain J158_02568 PF11741 AMIN domain J158_02568 PF01520 N-acetylmuramoyl-L-alanine amidase J158_02569 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE J158_02570 PF01256 Carbohydrate kinase J158_02570 PF03853 YjeF-related protein N-terminus J158_02571 PF08331 Domain of unknown function (DUF1730) J158_02572 PF13742 OB-fold nucleic acid binding domain J158_02572 PF02601 Exonuclease VII, large subunit J158_02574 PF03781 Sulfatase-modifying factor enzyme 1 J158_02575 PF00570 HRDC domain J158_02575 PF01612 3'-5' exonuclease J158_02577 PF01068 ATP dependent DNA ligase domain J158_02577 PF04679 ATP dependent DNA ligase C terminal region J158_02577 PF13298 DNA polymerase Ligase (LigD) J158_02581 PF00589 Phage integrase family J158_02585 PF05598 Transposase domain (DUF772) J158_02587 PF01527 Transposase J158_02591 PF00171 Aldehyde dehydrogenase family J158_02591 PF01619 Proline dehydrogenase J158_02591 PF14850 DNA-binding domain of Proline dehydrogenase J158_02591 PF18327 Proline utilization A proline dehydrogenase N-terminal domain J158_02593 PF01527 Transposase J158_02595 PF00665 Integrase core domain J158_02595 PF13333 Integrase core domain J158_02595 PF13276 HTH-like domain J158_02597 PF00239 Resolvase, N terminal domain J158_02597 PF02796 Helix-turn-helix domain of resolvase J158_02600 PF02384 N-6 DNA Methylase J158_02601 PF09572 XamI restriction endonuclease J158_02613 PF01584 CheW-like domain J158_02614 PF00672 HAMP domain J158_02614 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J158_02614 PF12729 Four helix bundle sensory module for signal transduction J158_02615 PF02245 Methylpurine-DNA glycosylase (MPG) J158_02616 PF00270 DEAD/DEAH box helicase J158_02616 PF00271 Helicase conserved C-terminal domain J158_02616 PF08494 DEAD/H associated J158_02619 PF04386 Stringent starvation protein B J158_02620 PF00043 Glutathione S-transferase, C-terminal domain J158_02620 PF02798 Glutathione S-transferase, N-terminal domain J158_02621 PF02167 Cytochrome C1 family J158_02622 PF00033 Cytochrome b/b6/petB J158_02622 PF00032 Cytochrome b(C-terminal)/b6/petD J158_02623 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal J158_02623 PF00355 Rieske [2Fe-2S] domain J158_02624 PF01464 Transglycosylase SLT domain J158_02627 PF00919 Uncharacterized protein family UPF0004 J158_02627 PF01938 TRAM domain J158_02627 PF04055 Radical SAM superfamily J158_02628 PF02562 PhoH-like protein J158_02630 PF02130 Uncharacterized protein family UPF0054 J158_02632 PF03471 Transporter associated domain J158_02632 PF00571 CBS domain J158_02635 PF00171 Aldehyde dehydrogenase family J158_02636 PF00528 Binding-protein-dependent transport system inner membrane component J158_02637 PF00528 Binding-protein-dependent transport system inner membrane component J158_02638 PF08402 TOBE domain J158_02638 PF00005 ABC transporter J158_02639 PF02321 Outer membrane efflux protein J158_02640 PF07690 Major Facilitator Superfamily J158_02641 PF13533 Biotin-lipoyl like J158_02642 PF13416 Bacterial extracellular solute-binding protein J158_02643 PF00202 Aminotransferase class-III J158_02644 PF00120 Glutamine synthetase, catalytic domain J158_02645 PF07722 Peptidase C26 J158_02646 PF00120 Glutamine synthetase, catalytic domain J158_02647 PF01266 FAD dependent oxidoreductase J158_02648 PF00990 Diguanylate cyclase, GGDEF domain J158_02648 PF00072 Response regulator receiver domain J158_02649 PF01814 Hemerythrin HHE cation binding domain J158_02650 PF07690 Major Facilitator Superfamily J158_02650 PF00083 Sugar (and other) transporter J158_02652 PF00384 Molybdopterin oxidoreductase J158_02653 PF02634 FdhD/NarQ family J158_02654 PF07690 Major Facilitator Superfamily J158_02655 PF00202 Aminotransferase class-III J158_02657 PF04286 Protein of unknown function (DUF445) J158_02658 PF01627 Hpt domain J158_02658 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_02658 PF00672 HAMP domain J158_02658 PF00512 His Kinase A (phospho-acceptor) domain J158_02658 PF00072 Response regulator receiver domain J158_02658 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J158_02659 PF00072 Response regulator receiver domain J158_02660 PF07690 Major Facilitator Superfamily J158_02661 PF05088 Bacterial NAD-glutamate dehydrogenase J158_02663 PF00529 HlyD membrane-fusion protein of T1SS J158_02663 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J158_02664 PF00873 AcrB/AcrD/AcrF family J158_02665 PF00356 Bacterial regulatory proteins, lacI family J158_02666 PF05524 PEP-utilising enzyme, N-terminal J158_02666 PF02896 PEP-utilising enzyme, TIM barrel domain J158_02666 PF00391 PEP-utilising enzyme, mobile domain J158_02666 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J158_02666 PF00381 PTS HPr component phosphorylation site J158_02667 PF00294 pfkB family carbohydrate kinase J158_02668 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J158_02674 PF07549 SecD/SecF GG Motif J158_02674 PF02355 Protein export membrane protein J158_02675 PF02355 Protein export membrane protein J158_02675 PF07549 SecD/SecF GG Motif J158_02675 PF13721 SecD export protein N-terminal TM region J158_02676 PF02699 Preprotein translocase subunit J158_02677 PF01702 Queuine tRNA-ribosyltransferase J158_02678 PF02547 Queuosine biosynthesis protein J158_02687 PF00759 Glycosyl hydrolase family 9 J158_02687 PF02927 Cellulase N-terminal ig-like domain J158_02689 PF00037 4Fe-4S binding domain J158_02692 PF01467 Cytidylyltransferase-like J158_02694 PF00183 Hsp90 protein J158_02694 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_02698 PF00593 TonB dependent receptor J158_02698 PF07715 TonB-dependent Receptor Plug Domain J158_02699 PF04616 Glycosyl hydrolases family 43 J158_02700 PF07532 Bacterial Ig-like domain (group 4) J158_02701 PF07715 TonB-dependent Receptor Plug Domain J158_02701 PF00593 TonB dependent receptor J158_02703 PF00082 Subtilase family J158_02703 PF09286 Pro-kumamolisin, activation domain J158_02709 PF13520 Amino acid permease J158_02712 PF00557 Metallopeptidase family M24 J158_02712 PF01321 Creatinase/Prolidase N-terminal domain J158_02713 PF00171 Aldehyde dehydrogenase family J158_02714 PF00701 Dihydrodipicolinate synthetase family J158_02715 PF07992 Pyridine nucleotide-disulphide oxidoreductase J158_02715 PF04324 BFD-like [2Fe-2S] binding domain J158_02717 PF01266 FAD dependent oxidoreductase J158_02718 PF05544 Proline racemase J158_02720 PF02881 SRP54-type protein, helical bundle domain J158_02720 PF00448 SRP54-type protein, GTPase domain J158_02721 PF14815 NUDIX domain J158_02721 PF00730 HhH-GPD superfamily base excision DNA repair protein J158_02721 PF00633 Helix-hairpin-helix motif J158_02721 PF10576 Iron-sulfur binding domain of endonuclease III J158_02722 PF04362 Bacterial Fe(2+) trafficking J158_02723 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_02723 PF13426 PAS domain J158_02723 PF00072 Response regulator receiver domain J158_02729 PF08212 Lipocalin-like domain J158_02731 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J158_02731 PF02770 Acyl-CoA dehydrogenase, middle domain J158_02731 PF12806 Acetyl-CoA dehydrogenase C-terminal like J158_02731 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J158_02733 PF13292 1-deoxy-D-xylulose-5-phosphate synthase J158_02733 PF02779 Transketolase, pyrimidine binding domain J158_02733 PF02780 Transketolase, C-terminal domain J158_02737 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family J158_02738 PF00753 Metallo-beta-lactamase superfamily J158_02738 PF16123 Hydroxyacylglutathione hydrolase C-terminus J158_02739 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J158_02739 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J158_02742 PF03808 Glycosyl transferase WecB/TagA/CpsF family J158_02745 PF14667 Polysaccharide biosynthesis C-terminal domain J158_02747 PF00534 Glycosyl transferases group 1 J158_02747 PF13439 Glycosyltransferase Family 4 J158_02751 PF02397 Bacterial sugar transferase J158_02755 PF13411 MerR HTH family regulatory protein J158_02756 PF00216 Bacterial DNA-binding protein J158_02757 PF03483 B3/4 domain J158_02757 PF03484 tRNA synthetase B5 domain J158_02757 PF03147 Ferredoxin-fold anticodon binding domain J158_02757 PF01588 Putative tRNA binding domain J158_02757 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain J158_02758 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain J158_02758 PF01409 tRNA synthetases class II core domain (F) J158_02759 PF00453 Ribosomal protein L20 J158_02760 PF01632 Ribosomal protein L35 J158_02762 PF00707 Translation initiation factor IF-3, C-terminal domain J158_02762 PF05198 Translation initiation factor IF-3, N-terminal domain J158_02763 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J158_02763 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J158_02763 PF02824 TGS domain J158_02763 PF03129 Anticodon binding domain J158_02764 PF00356 Bacterial regulatory proteins, lacI family J158_02765 PF00686 Starch binding domain J158_02765 PF00128 Alpha amylase, catalytic domain J158_02766 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J158_02768 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation J158_02768 PF14508 Glycosyl-hydrolase 97 N-terminal J158_02768 PF10566 Glycoside hydrolase 97 J158_02772 PF00128 Alpha amylase, catalytic domain J158_02774 PF01527 Transposase J158_02783 PF03135 CagE, TrbE, VirB family, component of type IV transporter system J158_02784 PF05101 Type IV secretory pathway, VirB3-like protein J158_02786 PF01464 Transglycosylase SLT domain J158_02787 PF00437 Type II/IV secretion system protein J158_02788 PF03743 Bacterial conjugation TrbI-like protein J158_02792 PF02534 Type IV secretory system Conjugative DNA transfer J158_02795 PF17757 UvrB interaction domain J158_02795 PF02151 UvrB/uvrC motif J158_02795 PF12344 Ultra-violet resistance protein B J158_02795 PF00271 Helicase conserved C-terminal domain J158_02795 PF04851 Type III restriction enzyme, res subunit J158_02803 PF01527 Transposase J158_02804 PF13276 HTH-like domain J158_02804 PF13333 Integrase core domain J158_02804 PF00665 Integrase core domain J158_02811 PF01555 DNA methylase J158_02822 PF00182 Chitinase class I J158_02832 PF13276 HTH-like domain J158_02832 PF00665 Integrase core domain J158_02832 PF13333 Integrase core domain J158_02833 PF01527 Transposase J158_02834 PF00114 Pilin (bacterial filament) J158_02834 PF07963 Prokaryotic N-terminal methylation motif J158_02835 PF05567 Neisseria PilC beta-propeller domain J158_02838 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_02838 PF07694 5TMR of 5TMR-LYT J158_02838 PF06580 Histidine kinase J158_02839 PF03641 Possible lysine decarboxylase J158_02839 PF11892 Domain of unknown function (DUF3412) J158_02839 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases J158_02840 PF00593 TonB dependent receptor J158_02841 PF01914 MarC family integral membrane protein J158_02843 PF00462 Glutaredoxin J158_02844 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J158_02844 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J158_02845 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain J158_02845 PF02222 ATP-grasp domain J158_02846 PF00731 AIR carboxylase J158_02848 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain J158_02848 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain J158_02850 PF00013 KH domain J158_02850 PF00575 S1 RNA binding domain J158_02850 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain J158_02850 PF01138 3' exoribonuclease family, domain 1 J158_02850 PF03725 3' exoribonuclease family, domain 2 J158_02851 PF00312 Ribosomal protein S15 J158_02852 PF09157 Pseudouridine synthase II TruB, C-terminal J158_02852 PF01509 TruB family pseudouridylate synthase (N terminal domain) J158_02852 PF16198 tRNA pseudouridylate synthase B C-terminal domain J158_02853 PF02033 Ribosome-binding factor A J158_02854 PF04760 Translation initiation factor IF-2, N-terminal region J158_02854 PF08364 Bacterial translation initiation factor IF-2 associated region J158_02854 PF11987 Translation-initiation factor 2 J158_02854 PF00009 Elongation factor Tu GTP binding domain J158_02855 PF08529 NusA N-terminal domain J158_02855 PF13184 NusA-like KH domain J158_02855 PF00575 S1 RNA binding domain J158_02856 PF02576 RimP N-terminal domain J158_02856 PF17384 RimP C-terminal SH3 domain J158_02858 PF00361 Proton-conducting membrane transporter J158_02859 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus J158_02859 PF00361 Proton-conducting membrane transporter J158_02860 PF00361 Proton-conducting membrane transporter J158_02860 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J158_02861 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J158_02862 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 J158_02863 PF12838 4Fe-4S dicluster domain J158_02864 PF00146 NADH dehydrogenase J158_02865 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J158_02865 PF00384 Molybdopterin oxidoreductase J158_02865 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal J158_02866 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J158_02866 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J158_02866 PF10531 SLBB domain J158_02868 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit J158_02869 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit J158_02870 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit J158_02871 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 J158_02874 PF00121 Triosephosphate isomerase J158_02875 PF00106 short chain dehydrogenase J158_02878 PF00563 EAL domain J158_02878 PF00990 Diguanylate cyclase, GGDEF domain J158_02878 PF03707 Bacterial signalling protein N terminal repeat J158_02881 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J158_02881 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J158_02881 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J158_02881 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J158_02882 PF17848 Acetyl-coA carboxylase zinc finger domain J158_02882 PF01039 Carboxyl transferase domain J158_02883 PF00290 Tryptophan synthase alpha chain J158_02885 PF00291 Pyridoxal-phosphate dependent enzyme J158_02886 PF03466 LysR substrate binding domain J158_02886 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J158_02887 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase J158_02888 PF01416 tRNA pseudouridine synthase J158_02892 PF02774 Semialdehyde dehydrogenase, dimerisation domain J158_02892 PF01118 Semialdehyde dehydrogenase, NAD binding domain J158_02893 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J158_02893 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J158_02894 PF01264 Chorismate synthase J158_02895 PF05175 Methyltransferase small domain J158_02896 PF02630 SCO1/SenC J158_02897 PF02666 Phosphatidylserine decarboxylase J158_02899 PF05872 Bacterial protein of unknown function (DUF853) J158_02900 PF00293 NUDIX domain J158_02903 PF03449 Transcription elongation factor, N-terminal J158_02903 PF01272 Transcription elongation factor, GreA/GreB, C-term J158_02904 PF00919 Uncharacterized protein family UPF0004 J158_02904 PF18693 TRAM domain J158_02904 PF04055 Radical SAM superfamily J158_02905 PF01738 Dienelactone hydrolase family J158_02909 PF00692 dUTPase J158_02910 PF10609 NUBPL iron-transfer P-loop NTPase J158_02911 PF07715 TonB-dependent Receptor Plug Domain J158_02911 PF00593 TonB dependent receptor J158_02914 PF05649 Peptidase family M13 J158_02914 PF01431 Peptidase family M13 J158_02915 PF05649 Peptidase family M13 J158_02915 PF01431 Peptidase family M13 J158_02918 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J158_02919 PF07992 Pyridine nucleotide-disulphide oxidoreductase J158_02919 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J158_02920 PF01266 FAD dependent oxidoreductase J158_02921 PF04235 Protein of unknown function (DUF418) J158_02922 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J158_02923 PF00877 NlpC/P60 family J158_02924 PF00877 NlpC/P60 family J158_02927 PF00375 Sodium:dicarboxylate symporter family J158_02928 PF00245 Alkaline phosphatase J158_02929 PF01171 PP-loop family J158_02929 PF09179 TilS substrate binding domain J158_02929 PF11734 TilS substrate C-terminal domain J158_02930 PF02609 Exonuclease VII small subunit J158_02931 PF00348 Polyprenyl synthetase J158_02932 PF14521 Lysine-specific metallo-endopeptidase J158_02934 PF01523 Putative modulator of DNA gyrase J158_02935 PF04751 Protein of unknown function (DUF615) J158_02936 PF01523 Putative modulator of DNA gyrase J158_02938 PF13502 AsmA-like C-terminal region J158_02938 PF13116 Protein of unknown function J158_02939 PF10150 Ribonuclease E/G family J158_02939 PF00575 S1 RNA binding domain J158_02940 PF02545 Maf-like protein J158_02941 PF04402 Protein of unknown function (DUF541) J158_02944 PF02590 Predicted SPOUT methyltransferase J158_02947 PF01467 Cytidylyltransferase-like J158_02950 PF13603 Leucyl-tRNA synthetase, Domain 2 J158_02950 PF00133 tRNA synthetases class I (I, L, M and V) J158_02950 PF08264 Anticodon-binding domain of tRNA J158_02952 PF00085 Thioredoxin J158_02957 PF04070 Domain of unknown function (DUF378) J158_02958 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J158_02960 PF03466 LysR substrate binding domain J158_02960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J158_02965 PF00005 ABC transporter J158_02965 PF00664 ABC transporter transmembrane region J158_02968 PF00873 AcrB/AcrD/AcrF family J158_02971 PF02321 Outer membrane efflux protein J158_02972 PF00486 Transcriptional regulatory protein, C terminal J158_02972 PF00072 Response regulator receiver domain J158_02973 PF00672 HAMP domain J158_02973 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_02973 PF00512 His Kinase A (phospho-acceptor) domain J158_02974 PF00999 Sodium/hydrogen exchanger family J158_02975 PF00144 Beta-lactamase J158_02976 PF03737 Aldolase/RraA J158_02979 PF00072 Response regulator receiver domain J158_02979 PF00990 Diguanylate cyclase, GGDEF domain J158_02980 PF01479 S4 domain J158_02980 PF00849 RNA pseudouridylate synthase J158_02981 PF08448 PAS fold J158_02981 PF00990 Diguanylate cyclase, GGDEF domain J158_02981 PF00563 EAL domain J158_02982 PF00270 DEAD/DEAH box helicase J158_02982 PF03880 DbpA RNA binding domain J158_02982 PF00271 Helicase conserved C-terminal domain J158_02992 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J158_02992 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J158_02994 PF00654 Voltage gated chloride channel J158_02995 PF08240 Alcohol dehydrogenase GroES-like domain J158_02995 PF00107 Zinc-binding dehydrogenase J158_02998 PF07715 TonB-dependent Receptor Plug Domain J158_02998 PF00593 TonB dependent receptor J158_03000 PF01483 Proprotein convertase P-domain J158_03000 PF00082 Subtilase family J158_03003 PF00082 Subtilase family J158_03003 PF01483 Proprotein convertase P-domain J158_03005 PF00248 Aldo/keto reductase family J158_03006 PF07690 Major Facilitator Superfamily J158_03007 PF03466 LysR substrate binding domain J158_03007 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J158_03009 PF06719 AraC-type transcriptional regulator N-terminus J158_03009 PF12833 Helix-turn-helix domain J158_03011 PF16859 Tetracyclin repressor-like, C-terminal domain J158_03011 PF00440 Bacterial regulatory proteins, tetR family J158_03012 PF02321 Outer membrane efflux protein J158_03013 PF00873 AcrB/AcrD/AcrF family J158_03014 PF00529 HlyD membrane-fusion protein of T1SS J158_03014 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J158_03016 PF01475 Ferric uptake regulator family J158_03017 PF00749 tRNA synthetases class I (E and Q), catalytic domain J158_03022 PF06123 Inner membrane protein CreD J158_03024 PF00512 His Kinase A (phospho-acceptor) domain J158_03024 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_03024 PF00672 HAMP domain J158_03025 PF00072 Response regulator receiver domain J158_03025 PF00486 Transcriptional regulatory protein, C terminal J158_03026 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ J158_03028 PF00271 Helicase conserved C-terminal domain J158_03028 PF17757 UvrB interaction domain J158_03028 PF03461 TRCF domain J158_03028 PF02559 CarD-like/TRCF domain J158_03028 PF00270 DEAD/DEAH box helicase J158_03035 PF02895 Signal transducing histidine kinase, homodimeric domain J158_03035 PF01627 Hpt domain J158_03035 PF09078 CheY binding J158_03035 PF01584 CheW-like domain J158_03035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_03036 PF02203 Tar ligand binding domain homologue J158_03036 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J158_03036 PF00672 HAMP domain J158_03037 PF01584 CheW-like domain J158_03038 PF00990 Diguanylate cyclase, GGDEF domain J158_03038 PF00563 EAL domain J158_03038 PF13426 PAS domain J158_03039 PF03705 CheR methyltransferase, all-alpha domain J158_03039 PF01739 CheR methyltransferase, SAM binding domain J158_03040 PF01339 CheB methylesterase J158_03040 PF00072 Response regulator receiver domain J158_03041 PF13091 PLD-like domain J158_03042 PF05649 Peptidase family M13 J158_03042 PF01431 Peptidase family M13 J158_03044 PF00300 Histidine phosphatase superfamily (branch 1) J158_03045 PF04493 Endonuclease V J158_03047 PF05726 Pirin C-terminal cupin domain J158_03047 PF02678 Pirin J158_03050 PF02678 Pirin J158_03050 PF05726 Pirin C-terminal cupin domain J158_03051 PF02554 Carbon starvation protein CstA J158_03051 PF13722 5TM C-terminal transporter carbon starvation CstA J158_03052 PF04328 Selenoprotein, putative J158_03061 PF01527 Transposase J158_03063 PF13478 XdhC Rossmann domain J158_03063 PF02625 XdhC and CoxI family J158_03064 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J158_03064 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J158_03065 PF00941 FAD binding domain in molybdopterin dehydrogenase J158_03065 PF03450 CO dehydrogenase flavoprotein C-terminal domain J158_03066 PF00111 2Fe-2S iron-sulfur cluster binding domain J158_03066 PF10518 TAT (twin-arginine translocation) pathway signal sequence J158_03066 PF01799 [2Fe-2S] binding domain J158_03067 PF00698 Acyl transferase domain J158_03067 PF14765 Polyketide synthase dehydratase J158_03067 PF16197 Ketoacyl-synthetase C-terminal extension J158_03067 PF08990 Erythronolide synthase docking J158_03067 PF08240 Alcohol dehydrogenase GroES-like domain J158_03067 PF08659 KR domain J158_03067 PF09277 Erythronolide synthase, docking J158_03067 PF02801 Beta-ketoacyl synthase, C-terminal domain J158_03067 PF00109 Beta-ketoacyl synthase, N-terminal domain J158_03067 PF00550 Phosphopantetheine attachment site J158_03068 PF00563 EAL domain J158_03068 PF00990 Diguanylate cyclase, GGDEF domain J158_03068 PF00360 Phytochrome region J158_03068 PF01590 GAF domain J158_03069 PF00436 Single-strand binding protein family J158_03070 PF00348 Polyprenyl synthetase J158_03072 PF08245 Mur ligase middle domain J158_03072 PF02875 Mur ligase family, glutamate ligase domain J158_03075 PF00696 Amino acid kinase family J158_03075 PF01842 ACT domain J158_03076 PF02567 Phenazine biosynthesis-like protein J158_03077 PF02567 Phenazine biosynthesis-like protein J158_03079 PF02566 OsmC-like protein J158_03080 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J158_03080 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J158_03081 PF03652 Holliday junction resolvase J158_03082 PF02622 Uncharacterized ACR, COG1678 J158_03083 PF03352 Methyladenine glycosylase J158_03083 PF00117 Glutamine amidotransferase class-I J158_03083 PF00958 GMP synthase C terminal domain J158_03083 PF13302 Acetyltransferase (GNAT) domain J158_03083 PF13673 Acetyltransferase (GNAT) domain J158_03086 PF03211 Pectate lyase J158_03087 PF00437 Type II/IV secretion system protein J158_03088 PF00437 Type II/IV secretion system protein J158_03089 PF01168 Alanine racemase, N-terminal domain J158_03090 PF14748 Pyrroline-5-carboxylate reductase dimerisation J158_03090 PF03807 NADP oxidoreductase coenzyme F420-dependent J158_03092 PF01551 Peptidase family M23 J158_03096 PF01965 DJ-1/PfpI family J158_03098 PF02082 Transcriptional regulator J158_03099 PF01458 Uncharacterized protein family (UPF0051) J158_03100 PF00005 ABC transporter J158_03101 PF01458 Uncharacterized protein family (UPF0051) J158_03102 PF00266 Aminotransferase class-V J158_03104 PF00355 Rieske [2Fe-2S] domain J158_03105 PF07715 TonB-dependent Receptor Plug Domain J158_03105 PF00593 TonB dependent receptor J158_03106 PF13640 2OG-Fe(II) oxygenase superfamily J158_03106 PF18331 PKHD-type hydroxylase C-terminal domain J158_03111 PF02424 ApbE family J158_03112 PF00258 Flavodoxin J158_03112 PF00667 FAD binding domain J158_03112 PF00175 Oxidoreductase NAD-binding domain J158_03116 PF07687 Peptidase dimerisation domain J158_03116 PF01546 Peptidase family M20/M25/M40 J158_03118 PF01636 Phosphotransferase enzyme family J158_03119 PF00483 Nucleotidyl transferase J158_03120 PF00308 Bacterial dnaA protein J158_03121 PF01594 AI-2E family transporter J158_03123 PF00586 AIR synthase related protein, N-terminal domain J158_03123 PF02769 AIR synthase related protein, C-terminal domain J158_03125 PF00551 Formyl transferase J158_03129 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J158_03130 PF01722 BolA-like protein J158_03131 PF01380 SIS domain J158_03131 PF00571 CBS domain J158_03134 PF03968 OstA-like protein J158_03135 PF00005 ABC transporter J158_03136 PF00309 Sigma-54 factor, Activator interacting domain (AID) J158_03136 PF04963 Sigma-54 factor, core binding domain J158_03136 PF04552 Sigma-54, DNA binding domain J158_03137 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J158_03138 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J158_03139 PF02603 HPr Serine kinase N terminus J158_03139 PF07475 HPr Serine kinase C-terminal domain J158_03140 PF03668 P-loop ATPase protein family J158_03142 PF00381 PTS HPr component phosphorylation site J158_03143 PF05524 PEP-utilising enzyme, N-terminal J158_03143 PF00391 PEP-utilising enzyme, mobile domain J158_03143 PF02896 PEP-utilising enzyme, TIM barrel domain J158_03144 PF01769 Divalent cation transporter J158_03144 PF03448 MgtE intracellular N domain J158_03144 PF00571 CBS domain J158_03145 PF00756 Putative esterase J158_03146 PF02322 Cytochrome bd terminal oxidase subunit II J158_03147 PF01654 Cytochrome bd terminal oxidase subunit I J158_03149 PF00324 Amino acid permease J158_03150 PF00544 Pectate lyase J158_03151 PF00561 alpha/beta hydrolase fold J158_03152 PF00196 Bacterial regulatory proteins, luxR family J158_03153 PF00324 Amino acid permease J158_03158 PF12706 Beta-lactamase superfamily domain J158_03159 PF04820 Tryptophan halogenase J158_03164 PF09278 MerR, DNA binding J158_03164 PF00376 MerR family regulatory protein J158_03165 PF07690 Major Facilitator Superfamily J158_03167 PF03738 Glutathionylspermidine synthase preATP-grasp J158_03172 PF04012 PspA/IM30 family J158_03174 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region J158_03174 PF01243 Pyridoxamine 5'-phosphate oxidase J158_03175 PF01202 Shikimate kinase J158_03176 PF01761 3-dehydroquinate synthase J158_03178 PF01208 Uroporphyrinogen decarboxylase (URO-D) J158_03191 PF01590 GAF domain J158_03191 PF02954 Bacterial regulatory protein, Fis family J158_03191 PF00158 Sigma-54 interaction domain J158_03192 PF07690 Major Facilitator Superfamily J158_03193 PF01627 Hpt domain J158_03193 PF00512 His Kinase A (phospho-acceptor) domain J158_03193 PF00072 Response regulator receiver domain J158_03193 PF00672 HAMP domain J158_03193 PF17149 Periplasmic sensor domain found in signal transduction proteins J158_03193 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_03194 PF17149 Periplasmic sensor domain found in signal transduction proteins J158_03194 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_03194 PF00072 Response regulator receiver domain J158_03194 PF00512 His Kinase A (phospho-acceptor) domain J158_03194 PF00672 HAMP domain J158_03194 PF01627 Hpt domain J158_03196 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_03196 PF00512 His Kinase A (phospho-acceptor) domain J158_03196 PF01627 Hpt domain J158_03196 PF00072 Response regulator receiver domain J158_03197 PF04264 YceI-like domain J158_03201 PF03315 Serine dehydratase beta chain J158_03201 PF03313 Serine dehydratase alpha chain J158_03202 PF12697 Alpha/beta hydrolase family J158_03203 PF00696 Amino acid kinase family J158_03203 PF00742 Homoserine dehydrogenase J158_03203 PF03447 Homoserine dehydrogenase, NAD binding domain J158_03204 PF01053 Cys/Met metabolism PLP-dependent enzyme J158_03205 PF00561 alpha/beta hydrolase fold J158_03207 PF08525 Opacity-associated protein A N-terminal motif J158_03207 PF01551 Peptidase family M23 J158_03207 PF01476 LysM domain J158_03208 PF16658 Class II release factor RF3, C-terminal domain J158_03208 PF00009 Elongation factor Tu GTP binding domain J158_03209 PF03006 Haemolysin-III related J158_03210 PF05170 AsmA family J158_03211 PF00478 IMP dehydrogenase / GMP reductase domain J158_03211 PF00571 CBS domain J158_03212 PF00535 Glycosyl transferase family 2 J158_03213 PF00912 Transglycosylase J158_03214 PF01430 Hsp33 protein J158_03216 PF00593 TonB dependent receptor J158_03216 PF07715 TonB-dependent Receptor Plug Domain J158_03218 PF00440 Bacterial regulatory proteins, tetR family J158_03219 PF00561 alpha/beta hydrolase fold J158_03220 PF09317 Domain of unknown function (DUF1974) J158_03220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J158_03220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J158_03225 PF01597 Glycine cleavage H-protein J158_03226 PF08669 Glycine cleavage T-protein C-terminal barrel domain J158_03226 PF01571 Aminomethyltransferase folate-binding domain J158_03228 PF16200 C-terminal region of band_7 J158_03228 PF01145 SPFH domain / Band 7 family J158_03229 PF02694 Uncharacterised BCR, YnfA/UPF0060 family J158_03230 PF03819 MazG nucleotide pyrophosphohydrolase domain J158_03231 PF00459 Inositol monophosphatase family J158_03232 PF00293 NUDIX domain J158_03233 PF00202 Aminotransferase class-III J158_03234 PF04452 RNA methyltransferase J158_03235 PF02685 Glucokinase J158_03238 PF01476 LysM domain J158_03238 PF00704 Glycosyl hydrolases family 18 J158_03239 PF07691 PA14 domain J158_03239 PF02838 Glycosyl hydrolase family 20, domain 2 J158_03239 PF00728 Glycosyl hydrolase family 20, catalytic domain J158_03241 PF07691 PA14 domain J158_03241 PF01915 Glycosyl hydrolase family 3 C-terminal domain J158_03241 PF00933 Glycosyl hydrolase family 3 N terminal domain J158_03241 PF14310 Fibronectin type III-like domain J158_03243 PF01301 Glycosyl hydrolases family 35 J158_03244 PF13520 Amino acid permease J158_03246 PF11975 Family 4 glycosyl hydrolase C-terminal domain J158_03246 PF02056 Family 4 glycosyl hydrolase J158_03248 PF17678 Glycosyl hydrolase family 92 N-terminal domain J158_03248 PF07971 Glycosyl hydrolase family 92 J158_03249 PF01301 Glycosyl hydrolases family 35 J158_03255 PF03932 CutC family J158_03256 PF01112 Asparaginase J158_03257 PF13302 Acetyltransferase (GNAT) domain J158_03260 PF01584 CheW-like domain J158_03260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_03260 PF01627 Hpt domain J158_03260 PF00072 Response regulator receiver domain J158_03261 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J158_03261 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term J158_03263 PF00072 Response regulator receiver domain J158_03264 PF00072 Response regulator receiver domain J158_03265 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain J158_03265 PF02951 Prokaryotic glutathione synthetase, N-terminal domain J158_03267 PF03747 ADP-ribosylglycohydrolase J158_03268 PF00814 Glycoprotease family J158_03269 PF13307 Helicase C-terminal domain J158_03269 PF04851 Type III restriction enzyme, res subunit J158_03271 PF14814 Bifunctional transglycosylase second domain J158_03271 PF00905 Penicillin binding protein transpeptidase domain J158_03271 PF00912 Transglycosylase J158_03272 PF00535 Glycosyl transferase family 2 J158_03274 PF04607 Region found in RelA / SpoT proteins J158_03274 PF02824 TGS domain J158_03274 PF13291 ACT domain J158_03275 PF12706 Beta-lactamase superfamily domain J158_03276 PF03070 TENA/THI-4/PQQC family J158_03277 PF05402 Coenzyme PQQ synthesis protein D (PqqD) J158_03278 PF13186 Iron-sulfur cluster-binding domain J158_03278 PF04055 Radical SAM superfamily J158_03281 PF02685 Glucokinase J158_03283 PF00270 DEAD/DEAH box helicase J158_03283 PF11898 Domain of unknown function (DUF3418) J158_03283 PF04408 Helicase associated domain (HA2) J158_03283 PF00271 Helicase conserved C-terminal domain J158_03283 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold J158_03284 PF00210 Ferritin-like domain J158_03285 PF00270 DEAD/DEAH box helicase J158_03285 PF09382 RQC domain J158_03285 PF16124 RecQ zinc-binding J158_03285 PF00570 HRDC domain J158_03285 PF00271 Helicase conserved C-terminal domain J158_03292 PF00672 HAMP domain J158_03292 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J158_03292 PF02203 Tar ligand binding domain homologue J158_03296 PF13581 Histidine kinase-like ATPase domain J158_03296 PF07536 HWE histidine kinase J158_03296 PF13426 PAS domain J158_03297 PF06508 Queuosine biosynthesis protein QueC J158_03299 PF04055 Radical SAM superfamily J158_03301 PF00691 OmpA family J158_03302 PF04052 TolB amino-terminal domain J158_03302 PF07676 WD40-like Beta Propeller Repeat J158_03304 PF02472 Biopolymer transport protein ExbD/TolR J158_03305 PF01618 MotA/TolQ/ExbB proton channel family J158_03306 PF03061 Thioesterase superfamily J158_03307 PF05496 Holliday junction DNA helicase RuvB P-loop domain J158_03307 PF05491 RuvB C-terminal winged helix domain J158_03307 PF17864 RuvB AAA lid domain J158_03309 PF02705 K+ potassium transporter J158_03310 PF01330 RuvA N terminal domain J158_03310 PF07499 RuvA, C-terminal domain J158_03311 PF02075 Crossover junction endodeoxyribonuclease RuvC J158_03312 PF01709 Transcriptional regulator J158_03315 PF01336 OB-fold nucleic acid binding domain J158_03315 PF02938 GAD domain J158_03315 PF00152 tRNA synthetases class II (D, K and N) J158_03318 PF07690 Major Facilitator Superfamily J158_03321 PF04185 Phosphoesterase family J158_03321 PF05506 Domain of unknown function (DUF756) J158_03324 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J158_03324 PF03466 LysR substrate binding domain J158_03326 PF00005 ABC transporter J158_03326 PF12848 ABC transporter J158_03327 PF07715 TonB-dependent Receptor Plug Domain J158_03327 PF00593 TonB dependent receptor J158_03329 PF00593 TonB dependent receptor J158_03329 PF07715 TonB-dependent Receptor Plug Domain J158_03330 PF00593 TonB dependent receptor J158_03330 PF07715 TonB-dependent Receptor Plug Domain J158_03331 PF00067 Cytochrome P450 J158_03332 PF02254 TrkA-N domain J158_03332 PF00999 Sodium/hydrogen exchanger family J158_03337 PF07715 TonB-dependent Receptor Plug Domain J158_03337 PF00593 TonB dependent receptor J158_03337 PF07660 Secretin and TonB N terminus short domain J158_03339 PF04183 IucA / IucC family J158_03339 PF06276 Ferric iron reductase FhuF-like transporter J158_03340 PF07690 Major Facilitator Superfamily J158_03342 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J158_03342 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J158_03345 PF02654 Cobalamin-5-phosphate synthase J158_03347 PF02277 Phosphoribosyltransferase J158_03348 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase J158_03349 PF07685 CobB/CobQ-like glutamine amidotransferase domain J158_03349 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J158_03350 PF00155 Aminotransferase class I and II J158_03352 PF17113 Regulatory signalling modulator protein AmpE J158_03352 PF03186 CobD/Cbib protein J158_03353 PF12557 Cob(I)alamin adenosyltransferase N terminal J158_03353 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP J158_03356 PF07715 TonB-dependent Receptor Plug Domain J158_03356 PF00593 TonB dependent receptor J158_03358 PF00004 ATPase family associated with various cellular activities (AAA) J158_03358 PF07724 AAA domain (Cdc48 subfamily) J158_03358 PF02861 Clp amino terminal domain, pathogenicity island component J158_03358 PF10431 C-terminal, D2-small domain, of ClpB protein J158_03358 PF17871 AAA lid domain J158_03359 PF00005 ABC transporter J158_03360 PF00528 Binding-protein-dependent transport system inner membrane component J158_03361 PF09084 NMT1/THI5 like J158_03362 PF00248 Aldo/keto reductase family J158_03364 PF07715 TonB-dependent Receptor Plug Domain J158_03364 PF00593 TonB dependent receptor J158_03365 PF01541 GIY-YIG catalytic domain J158_03372 PF07715 TonB-dependent Receptor Plug Domain J158_03372 PF00593 TonB dependent receptor J158_03373 PF02358 Trehalose-phosphatase J158_03374 PF00723 Glycosyl hydrolases family 15 J158_03375 PF00982 Glycosyltransferase family 20 J158_03376 PF01011 PQQ enzyme repeat J158_03377 PF02203 Tar ligand binding domain homologue J158_03377 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J158_03377 PF00672 HAMP domain J158_03378 PF04134 Protein of unknown function, DUF393 J158_03381 PF00849 RNA pseudouridylate synthase J158_03382 PF13525 Outer membrane lipoprotein J158_03384 PF00795 Carbon-nitrogen hydrolase J158_03384 PF02540 NAD synthase J158_03386 PF01527 Transposase J158_03387 PF13333 Integrase core domain J158_03387 PF00665 Integrase core domain J158_03387 PF13276 HTH-like domain J158_03390 PF13406 Transglycosylase SLT domain J158_03391 PF01526 Tn3 transposase DDE domain J158_03391 PF13700 Domain of unknown function (DUF4158) J158_03395 PF01129 NAD:arginine ADP-ribosyltransferase J158_03400 PF02629 CoA binding domain J158_03400 PF00549 CoA-ligase J158_03401 PF00549 CoA-ligase J158_03401 PF08442 ATP-grasp domain J158_03402 PF00512 His Kinase A (phospho-acceptor) domain J158_03402 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_03403 PF00072 Response regulator receiver domain J158_03403 PF00158 Sigma-54 interaction domain J158_03403 PF02954 Bacterial regulatory protein, Fis family J158_03405 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J158_03405 PF00437 Type II/IV secretion system protein J158_03406 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J158_03406 PF00437 Type II/IV secretion system protein J158_03407 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J158_03407 PF00437 Type II/IV secretion system protein J158_03408 PF07963 Prokaryotic N-terminal methylation motif J158_03408 PF00114 Pilin (bacterial filament) J158_03409 PF00114 Pilin (bacterial filament) J158_03409 PF07963 Prokaryotic N-terminal methylation motif J158_03410 PF00482 Type II secretion system (T2SS), protein F J158_03411 PF06750 Bacterial Peptidase A24 N-terminal domain J158_03411 PF01478 Type IV leader peptidase family J158_03412 PF01121 Dephospho-CoA kinase J158_03415 PF01527 Transposase J158_03416 PF13276 HTH-like domain J158_03416 PF00665 Integrase core domain J158_03416 PF13333 Integrase core domain J158_03417 PF00989 PAS fold J158_03417 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_03417 PF16736 Single Cache-like J158_03417 PF00512 His Kinase A (phospho-acceptor) domain J158_03418 PF00486 Transcriptional regulatory protein, C terminal J158_03418 PF00072 Response regulator receiver domain J158_03420 PF08443 RimK-like ATP-grasp domain J158_03420 PF18030 RimK PreATP-grasp domain J158_03421 PF00128 Alpha amylase, catalytic domain J158_03421 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J158_03434 PF04002 RadC-like JAB domain J158_03439 PF00072 Response regulator receiver domain J158_03439 PF13426 PAS domain J158_03439 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_03440 PF00072 Response regulator receiver domain J158_03440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_03440 PF13426 PAS domain J158_03446 PF01527 Transposase J158_03455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_03455 PF00512 His Kinase A (phospho-acceptor) domain J158_03455 PF08448 PAS fold J158_03455 PF13188 PAS domain J158_03455 PF00072 Response regulator receiver domain J158_03459 PF13676 TIR domain J158_03463 PF03797 Autotransporter beta-domain J158_03463 PF00657 GDSL-like Lipase/Acylhydrolase J158_03465 PF05690 Thiazole biosynthesis protein ThiG J158_03466 PF02390 Putative methyltransferase J158_03467 PF02080 TrkA-C domain J158_03467 PF03600 Citrate transporter J158_03470 PF01557 Fumarylacetoacetate (FAA) hydrolase family J158_03471 PF01741 Large-conductance mechanosensitive channel, MscL J158_03473 PF00356 Bacterial regulatory proteins, lacI family J158_03475 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain J158_03475 PF02837 Glycosyl hydrolases family 2, sugar binding domain J158_03475 PF00703 Glycosyl hydrolases family 2 J158_03476 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation J158_03476 PF14508 Glycosyl-hydrolase 97 N-terminal J158_03476 PF10566 Glycoside hydrolase 97 J158_03478 PF00135 Carboxylesterase family J158_03479 PF00588 SpoU rRNA Methylase family J158_03479 PF08032 RNA 2'-O ribose methyltransferase substrate binding J158_03481 PF01433 Peptidase family M1 domain J158_03481 PF11838 ERAP1-like C-terminal domain J158_03483 PF13333 Integrase core domain J158_03483 PF00665 Integrase core domain J158_03483 PF13276 HTH-like domain J158_03484 PF01527 Transposase J158_03490 PF00873 AcrB/AcrD/AcrF family J158_03491 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J158_03491 PF00529 HlyD membrane-fusion protein of T1SS J158_03492 PF00009 Elongation factor Tu GTP binding domain J158_03493 PF01507 Phosphoadenosine phosphosulfate reductase family J158_03494 PF00175 Oxidoreductase NAD-binding domain J158_03494 PF00258 Flavodoxin J158_03494 PF00667 FAD binding domain J158_03495 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J158_03495 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J158_03496 PF01507 Phosphoadenosine phosphosulfate reductase family J158_03500 PF00072 Response regulator receiver domain J158_03500 PF00512 His Kinase A (phospho-acceptor) domain J158_03500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_03500 PF01627 Hpt domain J158_03502 PF03466 LysR substrate binding domain J158_03502 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J158_03503 PF14824 Sirohaem biosynthesis protein central J158_03503 PF10414 Sirohaem synthase dimerisation region J158_03503 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J158_03504 PF00291 Pyridoxal-phosphate dependent enzyme J158_03506 PF01661 Macro domain J158_03507 PF00274 Fructose-bisphosphate aldolase class-I J158_03508 PF02887 Pyruvate kinase, alpha/beta domain J158_03508 PF00224 Pyruvate kinase, barrel domain J158_03510 PF00162 Phosphoglycerate kinase J158_03515 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J158_03515 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J158_03517 PF03922 OmpW family J158_03518 PF03922 OmpW family J158_03520 PF00753 Metallo-beta-lactamase superfamily J158_03520 PF04273 Putative phosphatase (DUF442) J158_03522 PF00528 Binding-protein-dependent transport system inner membrane component J158_03523 PF00005 ABC transporter J158_03523 PF03459 TOBE domain J158_03530 PF03734 L,D-transpeptidase catalytic domain J158_03530 PF01476 LysM domain J158_03531 PF04225 Opacity-associated protein A LysM-like domain J158_03531 PF01551 Peptidase family M23 J158_03533 PF07715 TonB-dependent Receptor Plug Domain J158_03533 PF00593 TonB dependent receptor J158_03534 PF12146 Serine aminopeptidase, S33 J158_03535 PF00456 Transketolase, thiamine diphosphate binding domain J158_03535 PF02779 Transketolase, pyrimidine binding domain J158_03535 PF02780 Transketolase, C-terminal domain J158_03536 PF00375 Sodium:dicarboxylate symporter family J158_03538 PF00092 von Willebrand factor type A domain J158_03538 PF07584 Aerotolerance regulator N-terminal J158_03542 PF17863 AAA lid domain J158_03542 PF07726 ATPase family associated with various cellular activities (AAA) J158_03544 PF11741 AMIN domain J158_03544 PF03958 Bacterial type II/III secretion system short domain J158_03544 PF00263 Bacterial type II and III secretion system protein J158_03544 PF07660 Secretin and TonB N terminus short domain J158_03549 PF00912 Transglycosylase J158_03549 PF00905 Penicillin binding protein transpeptidase domain J158_03549 PF17092 Penicillin-binding protein OB-like domain J158_03551 PF00285 Citrate synthase, C-terminal domain J158_03552 PF01197 Ribosomal protein L31 J158_03553 PF01156 Inosine-uridine preferring nucleoside hydrolase J158_03554 PF00270 DEAD/DEAH box helicase J158_03554 PF00271 Helicase conserved C-terminal domain J158_03554 PF17191 RecG wedge domain J158_03555 PF01042 Endoribonuclease L-PSP J158_03556 PF13291 ACT domain J158_03556 PF02824 TGS domain J158_03556 PF04607 Region found in RelA / SpoT proteins J158_03557 PF01192 RNA polymerase Rpb6 J158_03558 PF00625 Guanylate kinase J158_03559 PF03755 YicC-like family, N-terminal region J158_03559 PF08340 Domain of unknown function (DUF1732) J158_03560 PF01138 3' exoribonuclease family, domain 1 J158_03560 PF03725 3' exoribonuclease family, domain 2 J158_03562 PF01725 Ham1 family J158_03563 PF04055 Radical SAM superfamily J158_03563 PF06969 HemN C-terminal domain J158_03566 PF00557 Metallopeptidase family M24 J158_03568 PF05195 Aminopeptidase P, N-terminal domain J158_03568 PF00557 Metallopeptidase family M24 J158_03569 PF03695 Uncharacterised protein family (UPF0149) J158_03571 PF05164 Cell division protein ZapA J158_03573 PF01812 5-formyltetrahydrofolate cyclo-ligase family J158_03575 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) J158_03577 PF13369 Transglutaminase-like superfamily J158_03578 PF00301 Rubredoxin J158_03579 PF02581 Thiamine monophosphate synthase J158_03582 PF00202 Aminotransferase class-III J158_03583 PF00196 Bacterial regulatory proteins, luxR family J158_03583 PF17874 MalT-like TPR region J158_03584 PF00127 Copper binding proteins, plastocyanin/azurin family J158_03585 PF00155 Aminotransferase class I and II J158_03587 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J158_03587 PF00034 Cytochrome c J158_03588 PF01593 Flavin containing amine oxidoreductase J158_03591 PF00202 Aminotransferase class-III J158_03592 PF00027 Cyclic nucleotide-binding domain J158_03592 PF00520 Ion transport protein J158_03595 PF01569 PAP2 superfamily J158_03596 PF01062 Bestrophin, RFP-TM, chloride channel J158_03598 PF08245 Mur ligase middle domain J158_03598 PF02875 Mur ligase family, glutamate ligase domain J158_03598 PF01225 Mur ligase family, catalytic domain J158_03600 PF00365 Phosphofructokinase J158_03602 PF03030 Inorganic H+ pyrophosphatase J158_03604 PF00719 Inorganic pyrophosphatase J158_03606 PF07715 TonB-dependent Receptor Plug Domain J158_03606 PF00593 TonB dependent receptor J158_03607 PF12833 Helix-turn-helix domain J158_03608 PF00486 Transcriptional regulatory protein, C terminal J158_03608 PF18500 CadC C-terminal domain 1 J158_03609 PF01964 Radical SAM ThiC family J158_03609 PF13667 ThiC-associated domain J158_03611 PF07715 TonB-dependent Receptor Plug Domain J158_03611 PF00593 TonB dependent receptor J158_03612 PF02203 Tar ligand binding domain homologue J158_03612 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J158_03612 PF00672 HAMP domain J158_03614 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain J158_03614 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain J158_03615 PF00205 Thiamine pyrophosphate enzyme, central domain J158_03615 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J158_03615 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J158_03617 PF00291 Pyridoxal-phosphate dependent enzyme J158_03618 PF00682 HMGL-like J158_03618 PF08502 LeuA allosteric (dimerisation) domain J158_03619 PF00180 Isocitrate/isopropylmalate dehydrogenase J158_03620 PF00694 Aconitase C-terminal domain J158_03621 PF00330 Aconitase family (aconitate hydratase) J158_03622 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J158_03623 PF00990 Diguanylate cyclase, GGDEF domain J158_03623 PF17151 Periplasmic sensor domain J158_03626 PF02321 Outer membrane efflux protein J158_03627 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) J158_03628 PF03279 Bacterial lipid A biosynthesis acyltransferase J158_03633 PF00390 Malic enzyme, N-terminal domain J158_03633 PF03949 Malic enzyme, NAD binding domain J158_03633 PF01515 Phosphate acetyl/butaryl transferase J158_03634 PF00375 Sodium:dicarboxylate symporter family J158_03636 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_03636 PF02743 Cache domain J158_03636 PF00512 His Kinase A (phospho-acceptor) domain J158_03637 PF07690 Major Facilitator Superfamily J158_03639 PF03466 LysR substrate binding domain J158_03639 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J158_03640 PF00248 Aldo/keto reductase family J158_03644 PF00072 Response regulator receiver domain J158_03644 PF00196 Bacterial regulatory proteins, luxR family J158_03646 PF08521 Two-component sensor kinase N-terminal J158_03646 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_03646 PF00512 His Kinase A (phospho-acceptor) domain J158_03647 PF00072 Response regulator receiver domain J158_03647 PF00486 Transcriptional regulatory protein, C terminal J158_03649 PF03600 Citrate transporter J158_03651 PF00106 short chain dehydrogenase J158_03652 PF00356 Bacterial regulatory proteins, lacI family J158_03655 PF00128 Alpha amylase, catalytic domain J158_03658 PF03193 RsgA GTPase J158_03662 PF07715 TonB-dependent Receptor Plug Domain J158_03662 PF00593 TonB dependent receptor J158_03663 PF01522 Polysaccharide deacetylase J158_03664 PF00462 Glutaredoxin J158_03667 PF01527 Transposase J158_03672 PF02645 Uncharacterised protein, DegV family COG1307 J158_03673 PF01327 Polypeptide deformylase J158_03674 PF03960 ArsC family J158_03677 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) J158_03678 PF01270 Glycosyl hydrolases family 8 J158_03679 PF03170 Bacterial cellulose synthase subunit J158_03680 PF07238 PilZ domain J158_03680 PF00535 Glycosyl transferase family 2 J158_03680 PF03552 Cellulose synthase J158_03683 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family J158_03683 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain J158_03690 PF00593 TonB dependent receptor J158_03690 PF07715 TonB-dependent Receptor Plug Domain J158_03692 PF07702 UTRA domain J158_03692 PF00392 Bacterial regulatory proteins, gntR family J158_03694 PF00263 Bacterial type II and III secretion system protein J158_03694 PF03958 Bacterial type II/III secretion system short domain J158_03695 PF00263 Bacterial type II and III secretion system protein J158_03695 PF03958 Bacterial type II/III secretion system short domain J158_03697 PF10741 Type II secretion system (T2SS), protein M subtype b J158_03698 PF05137 Fimbrial assembly protein (PilN) J158_03699 PF03934 Type II secretion system (T2SS), protein K J158_03701 PF07963 Prokaryotic N-terminal methylation motif J158_03702 PF12019 Type II transport protein GspH J158_03703 PF08334 Type II secretion system (T2SS), protein G J158_03704 PF00482 Type II secretion system (T2SS), protein F J158_03705 PF00437 Type II/IV secretion system protein J158_03705 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J158_03706 PF00082 Subtilase family J158_03706 PF04151 Bacterial pre-peptidase C-terminal domain J158_03707 PF03895 YadA-like membrane anchor domain J158_03707 PF05662 Coiled stalk of trimeric autotransporter adhesin J158_03707 PF13018 Extended Signal Peptide of Type V secretion system J158_03707 PF05658 Head domain of trimeric autotransporter adhesin J158_03708 PF04151 Bacterial pre-peptidase C-terminal domain J158_03708 PF00082 Subtilase family J158_03709 PF13018 Extended Signal Peptide of Type V secretion system J158_03709 PF05658 Head domain of trimeric autotransporter adhesin J158_03709 PF03895 YadA-like membrane anchor domain J158_03709 PF05662 Coiled stalk of trimeric autotransporter adhesin J158_03710 PF02769 AIR synthase related protein, C-terminal domain J158_03710 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain J158_03710 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal J158_03711 PF10411 Disulfide bond isomerase protein N-terminus J158_03711 PF13098 Thioredoxin-like domain J158_03712 PF00589 Phage integrase family J158_03712 PF02899 Phage integrase, N-terminal SAM-like domain J158_03715 PF03739 Lipopolysaccharide export system permease LptF/LptG J158_03717 PF02789 Cytosol aminopeptidase family, N-terminal domain J158_03717 PF00883 Cytosol aminopeptidase family, catalytic domain J158_03720 PF10458 Valyl tRNA synthetase tRNA binding arm J158_03720 PF08264 Anticodon-binding domain of tRNA J158_03720 PF00133 tRNA synthetases class I (I, L, M and V) J158_03721 PF07715 TonB-dependent Receptor Plug Domain J158_03721 PF00593 TonB dependent receptor J158_03722 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain J158_03722 PF01464 Transglycosylase SLT domain J158_03723 PF00544 Pectate lyase J158_03726 PF01066 CDP-alcohol phosphatidyltransferase J158_03728 PF04073 Aminoacyl-tRNA editing domain J158_03728 PF03129 Anticodon binding domain J158_03728 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J158_03729 PF00816 H-NS histone family J158_03731 PF02405 Permease MlaE J158_03732 PF00005 ABC transporter J158_03733 PF03886 ABC-type transport auxiliary lipoprotein component J158_03733 PF02470 MlaD protein J158_03737 PF14307 Glycosyltransferase WbsX J158_03737 PF05045 Rhamnan synthesis protein F J158_03738 PF01144 Coenzyme A transferase J158_03739 PF01144 Coenzyme A transferase J158_03740 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J158_03740 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J158_03740 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J158_03740 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J158_03741 PF01050 Mannose-6-phosphate isomerase J158_03741 PF00483 Nucleotidyl transferase J158_03742 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J158_03742 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J158_03742 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J158_03743 PF04321 RmlD substrate binding domain J158_03744 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase J158_03745 PF00483 Nucleotidyl transferase J158_03746 PF16363 GDP-mannose 4,6 dehydratase J158_03747 PF01012 Electron transfer flavoprotein domain J158_03748 PF00766 Electron transfer flavoprotein FAD-binding domain J158_03748 PF01012 Electron transfer flavoprotein domain J158_03750 PF01040 UbiA prenyltransferase family J158_03751 PF04030 D-arabinono-1,4-lactone oxidase J158_03751 PF01565 FAD binding domain J158_03752 PF00106 short chain dehydrogenase J158_03754 PF01370 NAD dependent epimerase/dehydratase family J158_03755 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J158_03755 PF07992 Pyridine nucleotide-disulphide oxidoreductase J158_03760 PF00535 Glycosyl transferase family 2 J158_03762 PF14524 Wzt C-terminal domain J158_03762 PF00005 ABC transporter J158_03764 PF01053 Cys/Met metabolism PLP-dependent enzyme J158_03765 PF00571 CBS domain J158_03765 PF00291 Pyridoxal-phosphate dependent enzyme J158_03769 PF00437 Type II/IV secretion system protein J158_03770 PF14497 Glutathione S-transferase, C-terminal domain J158_03770 PF02798 Glutathione S-transferase, N-terminal domain J158_03772 PF00270 DEAD/DEAH box helicase J158_03772 PF00271 Helicase conserved C-terminal domain J158_03775 PF07715 TonB-dependent Receptor Plug Domain J158_03775 PF00593 TonB dependent receptor J158_03776 PF01242 6-pyruvoyl tetrahydropterin synthase J158_03779 PF13185 GAF domain J158_03781 PF00756 Putative esterase J158_03782 PF00593 TonB dependent receptor J158_03782 PF07715 TonB-dependent Receptor Plug Domain J158_03783 PF13419 Haloacid dehalogenase-like hydrolase J158_03784 PF00817 impB/mucB/samB family J158_03784 PF11799 impB/mucB/samB family C-terminal domain J158_03785 PF07977 FabA-like domain J158_03786 PF00109 Beta-ketoacyl synthase, N-terminal domain J158_03786 PF02801 Beta-ketoacyl synthase, C-terminal domain J158_03788 PF01432 Peptidase family M3 J158_03791 PF07731 Multicopper oxidase J158_03791 PF00394 Multicopper oxidase J158_03791 PF07732 Multicopper oxidase J158_03792 PF05275 Copper resistance protein B precursor (CopB) J158_03793 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J158_03799 PF01380 SIS domain J158_03800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J158_03801 PF12704 MacB-like periplasmic core domain J158_03801 PF02687 FtsX-like permease family J158_03801 PF00005 ABC transporter J158_03802 PF00005 ABC transporter J158_03802 PF12704 MacB-like periplasmic core domain J158_03802 PF02687 FtsX-like permease family J158_03803 PF02687 FtsX-like permease family J158_03803 PF12704 MacB-like periplasmic core domain J158_03805 PF00158 Sigma-54 interaction domain J158_03805 PF00072 Response regulator receiver domain J158_03806 PF12804 MobA-like NTP transferase domain J158_03806 PF14602 Hexapeptide repeat of succinyl-transferase J158_03806 PF00132 Bacterial transferase hexapeptide (six repeats) J158_03809 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain J158_03809 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain J158_03810 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J158_03810 PF02874 ATP synthase alpha/beta family, beta-barrel domain J158_03811 PF00231 ATP synthase J158_03812 PF02874 ATP synthase alpha/beta family, beta-barrel domain J158_03812 PF00306 ATP synthase alpha/beta chain, C terminal domain J158_03812 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J158_03813 PF00213 ATP synthase delta (OSCP) subunit J158_03814 PF00430 ATP synthase B/B' CF(0) J158_03815 PF00137 ATP synthase subunit C J158_03816 PF00119 ATP synthase A chain J158_03820 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J158_03820 PF07992 Pyridine nucleotide-disulphide oxidoreductase J158_03822 PF02817 e3 binding domain J158_03822 PF00364 Biotin-requiring enzyme J158_03822 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J158_03828 PF03180 NLPA lipoprotein J158_03829 PF00528 Binding-protein-dependent transport system inner membrane component J158_03830 PF00005 ABC transporter J158_03830 PF09383 NIL domain J158_03831 PF00892 EamA-like transporter family J158_03832 PF04461 Protein of unknown function (DUF520) J158_03834 PF01627 Hpt domain J158_03834 PF00512 His Kinase A (phospho-acceptor) domain J158_03834 PF00989 PAS fold J158_03834 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_03834 PF00072 Response regulator receiver domain J158_03834 PF18415 Histidine kinase receptor ArcB trans-membrane domain J158_03838 PF13419 Haloacid dehalogenase-like hydrolase J158_03839 PF01479 S4 domain J158_03839 PF00849 RNA pseudouridylate synthase J158_03840 PF08468 Methyltransferase small domain N-terminal J158_03840 PF05175 Methyltransferase small domain J158_03842 PF07995 Glucose / Sorbosone dehydrogenase J158_03844 PF00512 His Kinase A (phospho-acceptor) domain J158_03844 PF00989 PAS fold J158_03844 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_03848 PF01168 Alanine racemase, N-terminal domain J158_03848 PF00842 Alanine racemase, C-terminal domain J158_03849 PF01266 FAD dependent oxidoreductase J158_03850 PF01037 Lrp/AsnC ligand binding domain J158_03852 PF01641 SelR domain J158_03854 PF01618 MotA/TolQ/ExbB proton channel family J158_03855 PF00691 OmpA family J158_03855 PF13677 Membrane MotB of proton-channel complex MotA/MotB J158_03860 PF01061 ABC-2 type transporter J158_03861 PF00005 ABC transporter J158_03862 PF00999 Sodium/hydrogen exchanger family J158_03863 PF02469 Fasciclin domain J158_03864 PF03167 Uracil DNA glycosylase superfamily J158_03866 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J158_03868 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J158_03868 PF03466 LysR substrate binding domain J158_03869 PF03358 NADPH-dependent FMN reductase J158_03870 PF00248 Aldo/keto reductase family J158_03872 PF01431 Peptidase family M13 J158_03872 PF05649 Peptidase family M13 J158_03876 PF13520 Amino acid permease J158_03878 PF00072 Response regulator receiver domain J158_03878 PF04397 LytTr DNA-binding domain J158_03879 PF02743 Cache domain J158_03879 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_03879 PF00672 HAMP domain J158_03879 PF06580 Histidine kinase J158_03882 PF05974 Domain of unknown function (DUF892) J158_03883 PF05067 Manganese containing catalase J158_03886 PF01739 CheR methyltransferase, SAM binding domain J158_03886 PF03705 CheR methyltransferase, all-alpha domain J158_03886 PF08448 PAS fold J158_03886 PF01339 CheB methylesterase J158_03889 PF00072 Response regulator receiver domain J158_03889 PF02954 Bacterial regulatory protein, Fis family J158_03889 PF00158 Sigma-54 interaction domain J158_03891 PF01654 Cytochrome bd terminal oxidase subunit I J158_03892 PF02322 Cytochrome bd terminal oxidase subunit II J158_03896 PF16363 GDP-mannose 4,6 dehydratase J158_03898 PF03275 UDP-galactopyranose mutase J158_03900 PF00005 ABC transporter J158_03900 PF00664 ABC transporter transmembrane region J158_03903 PF08240 Alcohol dehydrogenase GroES-like domain J158_03903 PF00107 Zinc-binding dehydrogenase J158_03903 PF13823 Alcohol dehydrogenase GroES-associated J158_03912 PF00593 TonB dependent receptor J158_03912 PF07715 TonB-dependent Receptor Plug Domain J158_03915 PF00005 ABC transporter J158_03917 PF03466 LysR substrate binding domain J158_03917 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J158_03918 PF01042 Endoribonuclease L-PSP J158_03920 PF01527 Transposase J158_03924 PF00672 HAMP domain J158_03924 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J158_03924 PF02203 Tar ligand binding domain homologue J158_03927 PF03466 LysR substrate binding domain J158_03927 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J158_03928 PF02525 Flavodoxin-like fold J158_03937 PF00557 Metallopeptidase family M24 J158_03942 PF03979 Sigma-70 factor, region 1.1 J158_03942 PF04546 Sigma-70, non-essential region J158_03942 PF00140 Sigma-70 factor, region 1.2 J158_03942 PF04539 Sigma-70 region 3 J158_03942 PF04545 Sigma-70, region 4 J158_03942 PF04542 Sigma-70 region 2 J158_03943 PF02580 D-Tyr-tRNA(Tyr) deacylase J158_03944 PF03279 Bacterial lipid A biosynthesis acyltransferase J158_03946 PF00925 GTP cyclohydrolase II J158_03950 PF00535 Glycosyl transferase family 2 J158_03953 PF01189 16S rRNA methyltransferase RsmB/F J158_03953 PF01029 NusB family J158_03954 PF00551 Formyl transferase J158_03954 PF02911 Formyl transferase, C-terminal domain J158_03955 PF01327 Polypeptide deformylase J158_03956 PF01476 LysM domain J158_03957 PF02481 DNA recombination-mediator protein A J158_03957 PF17782 DprA winged helix domain J158_03958 PF04361 Protein of unknown function (DUF494) J158_03959 PF07963 Prokaryotic N-terminal methylation motif J158_03959 PF00114 Pilin (bacterial filament) J158_03961 PF01131 DNA topoisomerase J158_03961 PF01751 Toprim domain J158_03961 PF13368 Topoisomerase C-terminal repeat J158_03962 PF01300 Telomere recombination J158_03967 PF01343 Peptidase family S49 J158_03968 PF01554 MatE J158_03972 PF00271 Helicase conserved C-terminal domain J158_03972 PF17764 3′ DNA-binding domain (3′BD) J158_03972 PF18074 Primosomal protein N C-terminal domain J158_03972 PF18319 PriA DNA helicase Cys-rich region (CRR) domain J158_03972 PF00270 DEAD/DEAH box helicase J158_03973 PF00043 Glutathione S-transferase, C-terminal domain J158_03973 PF13417 Glutathione S-transferase, N-terminal domain J158_03976 PF07992 Pyridine nucleotide-disulphide oxidoreductase J158_03977 PF03458 UPF0126 domain J158_03978 PF04545 Sigma-70, region 4 J158_03978 PF04542 Sigma-70 region 2 J158_03979 PF03167 Uracil DNA glycosylase superfamily J158_03980 PF00072 Response regulator receiver domain J158_03980 PF01339 CheB methylesterase J158_03981 PF18075 FtsX extracellular domain J158_03982 PF00005 ABC transporter J158_03983 PF00270 DEAD/DEAH box helicase J158_03983 PF00271 Helicase conserved C-terminal domain J158_03983 PF12300 ATP-dependent RNA helicase RhlB J158_03984 PF00085 Thioredoxin J158_03985 PF07497 Rho termination factor, RNA-binding domain J158_03985 PF07498 Rho termination factor, N-terminal domain J158_03985 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J158_03986 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) J158_03987 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J158_03987 PF03466 LysR substrate binding domain J158_03989 PF03971 Monomeric isocitrate dehydrogenase J158_03992 PF09704 CRISPR-associated protein (Cas_Cas5) J158_03997 PF01867 CRISPR associated protein Cas1 J158_03998 PF09827 CRISPR associated protein Cas2 J158_04000 PF04972 BON domain J158_04000 PF01476 LysM domain J158_04001 PF14489 QueF-like protein J158_04001 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term J158_04002 PF01546 Peptidase family M20/M25/M40 J158_04002 PF07687 Peptidase dimerisation domain J158_04003 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J158_04004 PF00873 AcrB/AcrD/AcrF family J158_04005 PF00873 AcrB/AcrD/AcrF family J158_04006 PF07063 Domain of unknown function (DUF1338) J158_04014 PF01427 D-ala-D-ala dipeptidase J158_04015 PF01510 N-acetylmuramoyl-L-alanine amidase J158_04017 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J158_04017 PF13378 Enolase C-terminal domain-like J158_04019 PF13520 Amino acid permease J158_04022 PF05360 yiaA/B two helix domain J158_04023 PF07995 Glucose / Sorbosone dehydrogenase J158_04024 PF14310 Fibronectin type III-like domain J158_04024 PF00933 Glycosyl hydrolase family 3 N terminal domain J158_04024 PF01915 Glycosyl hydrolase family 3 C-terminal domain J158_04025 PF02152 Dihydroneopterin aldolase J158_04026 PF00814 Glycoprotease family J158_04027 PF01165 Ribosomal protein S21 J158_04028 PF09424 Yqey-like protein J158_04029 PF03631 Virulence factor BrkB J158_04030 PF01807 CHC2 zinc finger J158_04030 PF08275 DNA primase catalytic core, N-terminal domain J158_04030 PF10410 DnaB-helicase binding domain of primase J158_04030 PF08278 DNA primase DnaG DnaB-binding J158_04031 PF13593 SBF-like CPA transporter family (DUF4137) J158_04033 PF01040 UbiA prenyltransferase family J158_04038 PF00510 Cytochrome c oxidase subunit III J158_04039 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 J158_04041 PF00115 Cytochrome C and Quinol oxidase polypeptide I J158_04042 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J158_04042 PF02790 Cytochrome C oxidase subunit II, transmembrane domain J158_04044 PF18327 Proline utilization A proline dehydrogenase N-terminal domain J158_04044 PF14850 DNA-binding domain of Proline dehydrogenase J158_04044 PF01619 Proline dehydrogenase J158_04044 PF00171 Aldehyde dehydrogenase family J158_04052 PF00579 tRNA synthetases class I (W and Y) J158_04053 PF04225 Opacity-associated protein A LysM-like domain J158_04053 PF01551 Peptidase family M23 J158_04054 PF03702 Anhydro-N-acetylmuramic acid kinase J158_04056 PF07690 Major Facilitator Superfamily J158_04057 PF03372 Endonuclease/Exonuclease/phosphatase family J158_04058 PF00156 Phosphoribosyl transferase domain J158_04060 PF13614 AAA domain J158_04061 PF02195 ParB-like nuclease domain J158_04061 PF17762 HTH domain found in ParB protein J158_04063 PF01370 NAD dependent epimerase/dehydratase family J158_04064 PF00535 Glycosyl transferase family 2 J158_04067 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J158_04067 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J158_04067 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J158_04067 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J158_04068 PF00692 dUTPase J158_04069 PF04127 DNA / pantothenate metabolism flavoprotein J158_04069 PF02441 Flavoprotein J158_04070 PF04002 RadC-like JAB domain J158_04071 PF00750 tRNA synthetases class I (R) J158_04071 PF05746 DALR anticodon binding domain J158_04071 PF03485 Arginyl tRNA synthetase N terminal domain J158_04074 PF00106 short chain dehydrogenase J158_04075 PF01757 Acyltransferase family J158_04076 PF03033 Glycosyltransferase family 28 N-terminal domain J158_04077 PF00668 Condensation domain J158_04077 PF13193 AMP-binding enzyme C-terminal domain J158_04077 PF00501 AMP-binding enzyme J158_04077 PF00550 Phosphopantetheine attachment site J158_04077 PF00975 Thioesterase domain J158_04078 PF17944 Arginine decarboxylase C-terminal helical extension J158_04078 PF17810 Arginine decarboxylase helical bundle domain J158_04078 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J158_04079 PF17284 Spermidine synthase tetramerisation domain J158_04084 PF00543 Nitrogen regulatory protein P-II J158_04085 PF04380 Membrane fusogenic activity J158_04086 PF13335 Magnesium chelatase, subunit ChlI C-terminal J158_04086 PF01078 Magnesium chelatase, subunit ChlI J158_04089 PF00563 EAL domain J158_04089 PF12792 CSS motif domain associated with EAL J158_04090 PF00487 Fatty acid desaturase J158_04091 PF00970 Oxidoreductase FAD-binding domain J158_04091 PF00111 2Fe-2S iron-sulfur cluster binding domain J158_04091 PF00175 Oxidoreductase NAD-binding domain J158_04092 PF00440 Bacterial regulatory proteins, tetR family J158_04098 PF01139 tRNA-splicing ligase RtcB J158_04106 PF08338 Domain of unknown function (DUF1731) J158_04106 PF01370 NAD dependent epimerase/dehydratase family J158_04107 PF00486 Transcriptional regulatory protein, C terminal J158_04107 PF00072 Response regulator receiver domain J158_04108 PF08521 Two-component sensor kinase N-terminal J158_04108 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_04108 PF00512 His Kinase A (phospho-acceptor) domain J158_04112 PF00595 PDZ domain J158_04116 PF01594 AI-2E family transporter J158_04117 PF13419 Haloacid dehalogenase-like hydrolase J158_04118 PF02789 Cytosol aminopeptidase family, N-terminal domain J158_04118 PF00883 Cytosol aminopeptidase family, catalytic domain J158_04120 PF04542 Sigma-70 region 2 J158_04120 PF08281 Sigma-70, region 4 J158_04121 PF00199 Catalase J158_04124 PF00072 Response regulator receiver domain J158_04124 PF00196 Bacterial regulatory proteins, luxR family J158_04125 PF07730 Histidine kinase J158_04126 PF13533 Biotin-lipoyl like J158_04127 PF00005 ABC transporter J158_04131 PF00892 EamA-like transporter family J158_04132 PF00892 EamA-like transporter family J158_04133 PF00892 EamA-like transporter family J158_04136 PF00753 Metallo-beta-lactamase superfamily J158_04137 PF00579 tRNA synthetases class I (W and Y) J158_04138 PF05532 CsbD-like J158_04141 PF00491 Arginase family J158_04146 PF02223 Thymidylate kinase J158_04149 PF03309 Type III pantothenate kinase J158_04150 PF08279 HTH domain J158_04150 PF03099 Biotin/lipoate A/B protein ligase family J158_04150 PF02237 Biotin protein ligase C terminal domain J158_04152 PF06167 Glucose-regulated metallo-peptidase M90 J158_04155 PF00672 HAMP domain J158_04155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_04155 PF00512 His Kinase A (phospho-acceptor) domain J158_04156 PF00486 Transcriptional regulatory protein, C terminal J158_04156 PF00072 Response regulator receiver domain J158_04158 PF01207 Dihydrouridine synthase (Dus) J158_04161 PF00199 Catalase J158_04161 PF06628 Catalase-related immune-responsive J158_04162 PF06733 DEAD_2 J158_04162 PF13307 Helicase C-terminal domain J158_04165 PF01488 Shikimate / quinate 5-dehydrogenase J158_04165 PF08501 Shikimate dehydrogenase substrate binding domain J158_04165 PF18317 Shikimate 5'-dehydrogenase C-terminal domain J158_04167 PF00667 FAD binding domain J158_04167 PF00258 Flavodoxin J158_04167 PF00175 Oxidoreductase NAD-binding domain J158_04169 PF03466 LysR substrate binding domain J158_04169 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J158_04171 PF00490 Delta-aminolevulinic acid dehydratase J158_04175 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region J158_04175 PF00326 Prolyl oligopeptidase family J158_04176 PF00043 Glutathione S-transferase, C-terminal domain J158_04176 PF02798 Glutathione S-transferase, N-terminal domain J158_04180 PF04820 Tryptophan halogenase J158_04183 PF00005 ABC transporter J158_04185 PF01381 Helix-turn-helix J158_04187 PF01229 Glycosyl hydrolases family 39 J158_04188 PF02583 Metal-sensitive transcriptional repressor J158_04189 PF16916 Dimerisation domain of Zinc Transporter J158_04189 PF01545 Cation efflux family J158_04191 PF07715 TonB-dependent Receptor Plug Domain J158_04191 PF00593 TonB dependent receptor J158_04193 PF01965 DJ-1/PfpI family J158_04193 PF12833 Helix-turn-helix domain J158_04194 PF00970 Oxidoreductase FAD-binding domain J158_04194 PF00175 Oxidoreductase NAD-binding domain J158_04194 PF00111 2Fe-2S iron-sulfur cluster binding domain J158_04195 PF00005 ABC transporter J158_04196 PF01061 ABC-2 type transporter J158_04199 PF08546 Ketopantoate reductase PanE/ApbA C terminal J158_04199 PF02558 Ketopantoate reductase PanE/ApbA J158_04205 PF00268 Ribonucleotide reductase, small chain J158_04206 PF02867 Ribonucleotide reductase, barrel domain J158_04206 PF00317 Ribonucleotide reductase, all-alpha domain J158_04206 PF03477 ATP cone domain J158_04208 PF00583 Acetyltransferase (GNAT) family J158_04208 PF13380 CoA binding domain J158_04208 PF13607 Succinyl-CoA ligase like flavodoxin domain J158_04209 PF00571 CBS domain J158_04209 PF03448 MgtE intracellular N domain J158_04209 PF01769 Divalent cation transporter J158_04210 PF00194 Eukaryotic-type carbonic anhydrase J158_04211 PF00999 Sodium/hydrogen exchanger family J158_04211 PF02254 TrkA-N domain J158_04212 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J158_04212 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J158_04213 PF00723 Glycosyl hydrolases family 15 J158_04216 PF05166 YcgL domain J158_04217 PF02801 Beta-ketoacyl synthase, C-terminal domain J158_04217 PF00109 Beta-ketoacyl synthase, N-terminal domain J158_04219 PF00535 Glycosyl transferase family 2 J158_04230 PF07977 FabA-like domain J158_04231 PF01553 Acyltransferase J158_04233 PF00550 Phosphopantetheine attachment site J158_04234 PF04820 Tryptophan halogenase J158_04238 PF00326 Prolyl oligopeptidase family J158_04238 PF07676 WD40-like Beta Propeller Repeat J158_04241 PF01218 Coproporphyrinogen III oxidase J158_04242 PF01367 5'-3' exonuclease, C-terminal SAM fold J158_04242 PF01612 3'-5' exonuclease J158_04242 PF00476 DNA polymerase family A J158_04242 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J158_04248 PF03793 PASTA domain J158_04248 PF00069 Protein kinase domain J158_04256 PF04717 Type VI secretion system, phage-baseplate injector J158_04259 PF03793 PASTA domain J158_04259 PF00069 Protein kinase domain J158_04261 PF08281 Sigma-70, region 4 J158_04261 PF04542 Sigma-70 region 2 J158_04264 PF00328 Histidine phosphatase superfamily (branch 2) J158_04271 PF17871 AAA lid domain J158_04271 PF00004 ATPase family associated with various cellular activities (AAA) J158_04271 PF07724 AAA domain (Cdc48 subfamily) J158_04271 PF10431 C-terminal, D2-small domain, of ClpB protein J158_04276 PF05638 Type VI secretion system effector, Hcp J158_04281 PF14602 Hexapeptide repeat of succinyl-transferase J158_04281 PF12464 Maltose acetyltransferase J158_04282 PF00580 UvrD/REP helicase N-terminal domain J158_04282 PF13361 UvrD-like helicase C-terminal domain J158_04284 PF13396 Phospholipase_D-nuclease N-terminal J158_04284 PF13091 PLD-like domain J158_04285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J158_04285 PF03466 LysR substrate binding domain J158_04286 PF03737 Aldolase/RraA J158_04287 PF04303 PrpF protein J158_04288 PF04909 Amidohydrolase J158_04289 PF00471 Ribosomal protein L33 J158_04290 PF00830 Ribosomal L28 family J158_04291 PF00873 AcrB/AcrD/AcrF family J158_04292 PF13533 Biotin-lipoyl like J158_04296 PF02527 rRNA small subunit methyltransferase G J158_04297 PF16655 PhoD-like phosphatase, N-terminal domain J158_04297 PF09423 PhoD-like phosphatase J158_04299 PF16655 PhoD-like phosphatase, N-terminal domain J158_04299 PF09423 PhoD-like phosphatase J158_04300 PF01648 4'-phosphopantetheinyl transferase superfamily J158_04301 PF04226 Transglycosylase associated protein J158_04303 PF03372 Endonuclease/Exonuclease/phosphatase family J158_04305 PF00480 ROK family J158_04307 PF09312 SurA N-terminal domain J158_04309 PF00474 Sodium:solute symporter family J158_04310 PF04341 Protein of unknown function, DUF485 J158_04312 PF00501 AMP-binding enzyme J158_04312 PF13193 AMP-binding enzyme C-terminal domain J158_04312 PF16177 Acetyl-coenzyme A synthetase N-terminus J158_04313 PF00196 Bacterial regulatory proteins, luxR family J158_04313 PF00072 Response regulator receiver domain J158_04318 PF04616 Glycosyl hydrolases family 43 J158_04318 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J158_04319 PF00248 Aldo/keto reductase family J158_04322 PF01557 Fumarylacetoacetate (FAA) hydrolase family J158_04323 PF13378 Enolase C-terminal domain-like J158_04323 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J158_04325 PF05336 L-rhamnose mutarotase J158_04326 PF07690 Major Facilitator Superfamily J158_04327 PF09339 IclR helix-turn-helix domain J158_04327 PF01614 Bacterial transcriptional regulator J158_04328 PF02659 Putative manganese efflux pump J158_04329 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_04329 PF00512 His Kinase A (phospho-acceptor) domain J158_04331 PF06165 Glycosyltransferase family 36 J158_04331 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain J158_04334 PF13360 PQQ-like domain J158_04334 PF01011 PQQ enzyme repeat J158_04334 PF13570 PQQ-like domain J158_04338 PF04357 TamB, inner membrane protein subunit of TAM complex J158_04339 PF01103 Surface antigen J158_04339 PF17243 POTRA domain TamA domain 1 J158_04342 PF01527 Transposase J158_04343 PF00665 Integrase core domain J158_04343 PF13333 Integrase core domain J158_04343 PF13276 HTH-like domain J158_04344 PF00664 ABC transporter transmembrane region J158_04344 PF00005 ABC transporter J158_04344 PF03412 Peptidase C39 family J158_04346 PF02092 Glycyl-tRNA synthetase beta subunit J158_04346 PF05746 DALR anticodon binding domain J158_04347 PF02091 Glycyl-tRNA synthetase alpha subunit J158_04348 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J158_04348 PF00437 Type II/IV secretion system protein J158_04350 PF00117 Glutamine amidotransferase class-I J158_04350 PF00958 GMP synthase C terminal domain J158_04352 PF00902 Sec-independent protein translocase protein (TatC) J158_04353 PF02416 mttA/Hcf106 family J158_04354 PF02416 mttA/Hcf106 family J158_04356 PF00762 Ferrochelatase J158_04357 PF12697 Alpha/beta hydrolase family J158_04359 PF04381 Putative exonuclease, RdgC J158_04360 PF01171 PP-loop family J158_04362 PF00356 Bacterial regulatory proteins, lacI family J158_04363 PF07477 Glycosyl hydrolase family 67 C-terminus J158_04363 PF03648 Glycosyl hydrolase family 67 N-terminus J158_04363 PF07488 Glycosyl hydrolase family 67 middle domain J158_04365 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J158_04365 PF13378 Enolase C-terminal domain-like J158_04366 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J158_04366 PF04616 Glycosyl hydrolases family 43 J158_04367 PF07691 PA14 domain J158_04367 PF14310 Fibronectin type III-like domain J158_04367 PF01915 Glycosyl hydrolase family 3 C-terminal domain J158_04367 PF00933 Glycosyl hydrolase family 3 N terminal domain J158_04368 PF01232 Mannitol dehydrogenase Rossmann domain J158_04368 PF08125 Mannitol dehydrogenase C-terminal domain J158_04373 PF00171 Aldehyde dehydrogenase family J158_04376 PF00202 Aminotransferase class-III J158_04377 PF00202 Aminotransferase class-III J158_04379 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J158_04379 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J158_04382 PF08450 SMP-30/Gluconolactonase/LRE-like region J158_04383 PF00331 Glycosyl hydrolase family 10 J158_04384 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J158_04384 PF16355 Domain of unknown function (DUF4982) J158_04384 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 J158_04384 PF00703 Glycosyl hydrolases family 2 J158_04384 PF02837 Glycosyl hydrolases family 2, sugar binding domain J158_04385 PF02614 Glucuronate isomerase J158_04386 PF03422 Carbohydrate binding module (family 6) J158_04386 PF00331 Glycosyl hydrolase family 10 J158_04386 PF00553 Cellulose binding domain J158_04388 PF00331 Glycosyl hydrolase family 10 J158_04388 PF03422 Carbohydrate binding module (family 6) J158_04388 PF00553 Cellulose binding domain J158_04392 PF04616 Glycosyl hydrolases family 43 J158_04400 PF00550 Phosphopantetheine attachment site J158_04400 PF00107 Zinc-binding dehydrogenase J158_04400 PF14765 Polyketide synthase dehydratase J158_04400 PF08659 KR domain J158_04400 PF02801 Beta-ketoacyl synthase, C-terminal domain J158_04400 PF00109 Beta-ketoacyl synthase, N-terminal domain J158_04400 PF00698 Acyl transferase domain J158_04400 PF16197 Ketoacyl-synthetase C-terminal extension J158_04400 PF08240 Alcohol dehydrogenase GroES-like domain J158_04401 PF01553 Acyltransferase J158_04403 PF00356 Bacterial regulatory proteins, lacI family J158_04406 PF04820 Tryptophan halogenase J158_04407 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family J158_04408 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) J158_04410 PF04337 Protein of unknown function, DUF480 J158_04413 PF13361 UvrD-like helicase C-terminal domain J158_04413 PF00580 UvrD/REP helicase N-terminal domain J158_04414 PF00265 Thymidine kinase J158_04415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J158_04415 PF01590 GAF domain J158_04415 PF08446 PAS fold J158_04415 PF00360 Phytochrome region J158_04415 PF00512 His Kinase A (phospho-acceptor) domain J158_04416 PF04349 Periplasmic glucan biosynthesis protein, MdoG J158_04418 PF06827 Zinc finger found in FPG and IleRS J158_04418 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J158_04418 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J158_04425 PF03594 Benzoate membrane transport protein J158_04426 PF00360 Phytochrome region J158_04426 PF13426 PAS domain J158_04426 PF08446 PAS fold J158_04426 PF01590 GAF domain J158_04427 PF01126 Heme oxygenase J158_04428 PF07690 Major Facilitator Superfamily J158_04429 PF01263 Aldose 1-epimerase J158_04431 PF02810 SEC-C motif J158_04432 PF01925 Sulfite exporter TauE/SafE J158_04436 PF01227 GTP cyclohydrolase I J158_04438 PF07869 Protein of unknown function (DUF1656) J158_04439 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J158_04439 PF00529 HlyD membrane-fusion protein of T1SS J158_04440 PF02321 Outer membrane efflux protein J158_04441 PF04632 Fusaric acid resistance protein family J158_04442 PF00083 Sugar (and other) transporter J158_04443 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family J158_04444 PF13396 Phospholipase_D-nuclease N-terminal J158_04444 PF13091 PLD-like domain J158_04449 PF01850 PIN domain J158_04454 PF00849 RNA pseudouridylate synthase J158_04456 PF01527 Transposase J158_04457 PF13276 HTH-like domain J158_04457 PF00665 Integrase core domain J158_04457 PF13333 Integrase core domain J158_04460 PF02785 Biotin carboxylase C-terminal domain J158_04460 PF00289 Biotin carboxylase, N-terminal domain J158_04460 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J158_04461 PF01425 Amidase J158_04468 PF13538 UvrD-like helicase C-terminal domain J158_04471 PF00580 UvrD/REP helicase N-terminal domain J158_04471 PF13361 UvrD-like helicase C-terminal domain J158_04471 PF12705 PD-(D/E)XK nuclease superfamily J158_04472 PF17946 RecC C-terminal domain J158_04474 PF00005 ABC transporter J158_04475 PF02405 Permease MlaE J158_04476 PF02470 MlaD protein J158_04477 PF05494 MlaC protein J158_04479 PF04333 MlaA lipoprotein J158_04481 PF00255 Glutathione peroxidase J158_04483 PF02646 RmuC family J158_04484 PF08240 Alcohol dehydrogenase GroES-like domain J158_04484 PF00107 Zinc-binding dehydrogenase J158_04485 PF03466 LysR substrate binding domain J158_04485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J158_04487 PF13417 Glutathione S-transferase, N-terminal domain J158_04487 PF00043 Glutathione S-transferase, C-terminal domain J158_04489 PF13520 Amino acid permease J158_04490 PF17678 Glycosyl hydrolase family 92 N-terminal domain J158_04490 PF07971 Glycosyl hydrolase family 92 J158_04491 PF10947 Protein of unknown function (DUF2628) J158_04492 PF00990 Diguanylate cyclase, GGDEF domain J158_04493 PF05651 Putative sugar diacid recognition J158_04493 PF17853 GGDEF-like domain J158_04493 PF13556 PucR C-terminal helix-turn-helix domain J158_04494 PF02595 Glycerate kinase family J158_04495 PF07690 Major Facilitator Superfamily J158_04498 PF10672 S-adenosylmethionine-dependent methyltransferase J158_04498 PF17785 PUA-like domain J158_04500 PF03741 Integral membrane protein TerC family J158_04501 PF01694 Rhomboid family J158_04502 PF03009 Glycerophosphoryl diester phosphodiesterase family J158_04504 PF01569 PAP2 superfamily J158_04505 PF10396 GTP-binding protein TrmE N-terminus J158_04505 PF12631 MnmE helical domain J158_04505 PF01926 50S ribosome-binding GTPase J158_04506 PF01522 Polysaccharide deacetylase J158_04507 PF02096 60Kd inner membrane protein J158_04507 PF14849 YidC periplasmic domain J158_04508 PF00825 Ribonuclease P J158_04509 PF00468 Ribosomal protein L34