J158_00006 SM00857 Resolvase, N terminal domain J158_00007 SM00966 SpoVT / AbrB like domain J158_00029 SM00857 Resolvase, N terminal domain J158_00034 SM00670 Large family of predicted nucleotide-binding domains J158_00036 SM00857 Resolvase, N terminal domain J158_00096 SM00470 ParB-like nuclease domain J158_00103 SM00857 Resolvase, N terminal domain J158_00108 SM00670 Large family of predicted nucleotide-binding domains J158_00110 SM00857 Resolvase, N terminal domain J158_00111 SM00382 ATPases associated with a variety of cellular activities J158_00111 SM00760 Bacterial dnaA protein helix-turn-helix domain J158_00112 SM00480 DNA polymerase III beta subunit J158_00115 SM00387 Histidine kinase-like ATPases J158_00115 SM00433 TopoisomeraseII J158_00118 SM00028 Tetratricopeptide repeats J158_00125 SM00155 Phospholipase D. Active site motifs. J158_00128 SM00729 Elongator protein 3, MiaB family, Radical SAM J158_00134 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J158_00134 SM00245 tail specific protease J158_00142 SM00829 Enoylreductase J158_00167 SM00382 ATPases associated with a variety of cellular activities J158_00191 SM00487 DEAD-like helicases superfamily J158_00191 SM00490 helicase superfamily c-terminal domain J158_00195 SM00822 J158_00195 J158_00196 SM00822 J158_00196 J158_00245 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen J158_00249 SM00421 helix_turn_helix, Lux Regulon J158_00249 SM00448 cheY-homologous receiver domain J158_00253 SM00862 Transcriptional regulatory protein, C terminal J158_00269 SM00642 Alpha-amylase domain J158_00270 SM00642 Alpha-amylase domain J158_00271 SM00642 Alpha-amylase domain J158_00281 SM00354 helix_turn _helix lactose operon repressor J158_00289 SM00344 helix_turn_helix ASNC type J158_00293 SM00382 ATPases associated with a variety of cellular activities J158_00296 SM00382 ATPases associated with a variety of cellular activities J158_00302 SM00530 Helix-turn-helix XRE-family like proteins J158_00307 SM00855 Phosphoglycerate mutase family J158_00308 SM00867 YceI-like domain J158_00309 SM00155 Phospholipase D. Active site motifs. J158_00311 SM00563 Phosphate acyltransferases J158_00314 SM00028 Tetratricopeptide repeats J158_00316 SM00829 Enoylreductase J158_00319 SM01230 J158_00319 J158_00320 SM00938 Nitrogen regulatory protein P-II J158_00322 SM00387 Histidine kinase-like ATPases J158_00322 SM00388 His Kinase A (phosphoacceptor) domain J158_00323 SM00382 ATPases associated with a variety of cellular activities J158_00323 SM00448 cheY-homologous receiver domain J158_00335 SM00450 Rhodanese Homology Domain J158_00340 SM00387 Histidine kinase-like ATPases J158_00340 SM00388 His Kinase A (phosphoacceptor) domain J158_00341 SM00382 ATPases associated with a variety of cellular activities J158_00341 SM00448 cheY-homologous receiver domain J158_00363 SM00563 Phosphate acyltransferases J158_00369 SM00342 helix_turn_helix, arabinose operon control protein J158_00374 SM00100 Cyclic nucleotide-monophosphate binding domain J158_00374 SM00267 diguanylate cyclase J158_00379 SM00878 Biotin carboxylase C-terminal domain J158_00384 SM00953 J158_00384 J158_00392 SM00833 Cobalamin synthesis protein cobW C-terminal domain J158_00397 SM00347 helix_turn_helix multiple antibiotic resistance protein J158_00403 SM00829 Enoylreductase J158_00409 SM00487 DEAD-like helicases superfamily J158_00409 SM00490 helicase superfamily c-terminal domain J158_00409 SM00847 Helicase associated domain (HA2) Add an annotation J158_00434 SM00422 helix_turn_helix, mercury resistance J158_00441 SM00448 cheY-homologous receiver domain J158_00441 SM00862 Transcriptional regulatory protein, C terminal J158_00442 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J158_00442 SM00387 Histidine kinase-like ATPases J158_00442 SM00388 His Kinase A (phosphoacceptor) domain J158_00468 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J158_00469 SM00347 helix_turn_helix multiple antibiotic resistance protein J158_00473 SM00342 helix_turn_helix, arabinose operon control protein J158_00480 SM00420 helix_turn_helix, Deoxyribose operon repressor J158_00480 SM01134 J158_00480 J158_00483 SM00882 Coenzyme A transferase J158_00484 SM00882 Coenzyme A transferase J158_00488 SM00998 Adenylosuccinate lyase C-terminus J158_00492 SM00346 helix_turn_helix isocitrate lyase regulation J158_00493 SM00090 RIO-like kinase J158_00496 SM01228 J158_00496 J158_00507 SM00729 Elongator protein 3, MiaB family, Radical SAM J158_00507 SM00876 Biotin and Thiamin Synthesis associated domain J158_00512 SM00369 Leucine-rich repeats, typical (most populated) subfamily J158_00532 SM00382 ATPases associated with a variety of cellular activities J158_00544 SM00267 diguanylate cyclase J158_00546 SM00642 Alpha-amylase domain J158_00547 SM00642 Alpha-amylase domain J158_00549 SM00642 Alpha-amylase domain J158_00551 SM00642 Alpha-amylase domain J158_00560 SM00822 J158_00560 J158_00562 SM00487 DEAD-like helicases superfamily J158_00562 SM00490 helicase superfamily c-terminal domain J158_00565 SM00326 Src homology 3 domains J158_00566 SM00861 Transketolase, pyrimidine binding domain J158_00568 SM00237 Domains in Na-Ca exchangers and integrin-beta4 J158_00572 SM00347 helix_turn_helix multiple antibiotic resistance protein J158_00591 SM00271 DnaJ molecular chaperone homology domain J158_00595 SM00046 Diacylglycerol kinase catalytic domain (presumed) J158_00599 SM00903 Flavin reductase like domain J158_00603 SM00100 Cyclic nucleotide-monophosphate binding domain J158_00603 SM00419 helix_turn_helix, cAMP Regulatory protein J158_00613 SM00387 Histidine kinase-like ATPases J158_00613 SM00388 His Kinase A (phosphoacceptor) domain J158_00613 SM00448 cheY-homologous receiver domain J158_00614 SM00052 Putative diguanylate phosphodiesterase J158_00614 SM00267 diguanylate cyclase J158_00614 SM00448 cheY-homologous receiver domain J158_00625 SM00563 Phosphate acyltransferases J158_00629 SM01209 J158_00629 J158_00629 SM01210 J158_00629 J158_00631 SM00798 AICARFT/IMPCHase bienzyme J158_00631 SM00851 MGS-like domain J158_00634 SM00195 Dual specificity phosphatase, catalytic domain J158_00638 SM00563 Phosphate acyltransferases J158_00643 SM00530 Helix-turn-helix XRE-family like proteins J158_00648 SM00878 Biotin carboxylase C-terminal domain J158_00654 SM00342 helix_turn_helix, arabinose operon control protein J158_00656 SM00234 in StAR and phosphatidylcholine transfer protein J158_00660 SM00883 Chaperonin 10 Kd subunit J158_00671 SM00944 Pro-kumamolisin, activation domain J158_00674 SM00867 YceI-like domain J158_00685 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. J158_00687 SM00345 helix_turn_helix gluconate operon transcriptional repressor J158_00687 SM00895 J158_00687 J158_00691 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J158_00691 SM00331 Sigma factor PP2C-like phosphatases J158_00699 SM00342 helix_turn_helix, arabinose operon control protein J158_00711 SM00267 diguanylate cyclase J158_00716 SM00062 Bacterial periplasmic substrate-binding proteins J158_00725 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain J158_00725 SM01232 J158_00725 J158_00727 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J158_00730 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J158_00730 SM00091 PAS domain J158_00730 SM00267 diguanylate cyclase J158_00731 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J158_00731 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J158_00731 SM01049 J158_00731 J158_00732 SM00637 J158_00732 J158_00734 SM00267 diguanylate cyclase J158_00740 SM00448 cheY-homologous receiver domain J158_00740 SM00850 LytTr DNA-binding domain J158_00756 SM00382 ATPases associated with a variety of cellular activities J158_00756 SM01086 C-terminal, D2-small domain, of ClpB protein J158_00762 SM00267 diguanylate cyclase J158_00763 SM01263 J158_00763 J158_00766 SM00564 beta-propeller repeat J158_00767 SM00062 Bacterial periplasmic substrate-binding proteins J158_00767 SM00248 ankyrin repeats J158_00770 SM00829 Enoylreductase J158_00772 SM00382 ATPases associated with a variety of cellular activities J158_00774 SM00268 Actin J158_00779 SM00710 Parallel beta-helix repeats J158_00782 SM00936 Penicillin-binding protein 5, C-terminal domain J158_00786 SM00729 Elongator protein 3, MiaB family, Radical SAM J158_00787 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J158_00787 SM00245 tail specific protease J158_00798 SM01350 J158_00798 J158_00800 SM00749 bacterial OsmY and nodulation domain J158_00801 SM00387 Histidine kinase-like ATPases J158_00801 SM00388 His Kinase A (phosphoacceptor) domain J158_00802 SM00448 cheY-homologous receiver domain J158_00803 SM00387 Histidine kinase-like ATPases J158_00803 SM00388 His Kinase A (phosphoacceptor) domain J158_00803 SM00448 cheY-homologous receiver domain J158_00809 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. J158_00814 SM00382 ATPases associated with a variety of cellular activities J158_00830 SM00345 helix_turn_helix gluconate operon transcriptional repressor J158_00830 SM00866 J158_00830 J158_00832 SM00354 helix_turn _helix lactose operon repressor J158_00846 SM00849 Metallo-beta-lactamase superfamily J158_00847 SM00342 helix_turn_helix, arabinose operon control protein J158_00849 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J158_00849 SM00387 Histidine kinase-like ATPases J158_00849 SM00388 His Kinase A (phosphoacceptor) domain J158_00850 SM00448 cheY-homologous receiver domain J158_00850 SM00862 Transcriptional regulatory protein, C terminal J158_00854 SM00829 Enoylreductase J158_00857 SM00345 helix_turn_helix gluconate operon transcriptional repressor J158_00861 SM00382 ATPases associated with a variety of cellular activities J158_00874 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain J158_00880 SM00387 Histidine kinase-like ATPases J158_00880 SM00388 His Kinase A (phosphoacceptor) domain J158_00881 SM00448 cheY-homologous receiver domain J158_00881 SM00862 Transcriptional regulatory protein, C terminal J158_00905 SM00842 Cell division protein FtsA J158_00906 SM00864 Tubulin/FtsZ family, GTPase domain J158_00906 SM00865 Tubulin/FtsZ family, C-terminal domain J158_00910 SM00957 SecA DEAD-like domain J158_00910 SM00958 SecA preprotein cross-linking domain J158_00916 SM00829 Enoylreductase J158_00917 SM00944 Pro-kumamolisin, activation domain J158_00920 SM00642 Alpha-amylase domain J158_00927 SM00996 S-adenosyl-L-homocysteine hydrolase J158_00927 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain J158_00952 SM00382 ATPases associated with a variety of cellular activities J158_00956 SM00382 ATPases associated with a variety of cellular activities J158_00958 SM00448 cheY-homologous receiver domain J158_00958 SM00862 Transcriptional regulatory protein, C terminal J158_00959 SM00387 Histidine kinase-like ATPases J158_00959 SM00388 His Kinase A (phosphoacceptor) domain J158_00969 SM00382 ATPases associated with a variety of cellular activities J158_00971 SM00382 ATPases associated with a variety of cellular activities J158_00984 SM00382 ATPases associated with a variety of cellular activities J158_00987 SM00650 Ribosomal RNA adenine dimethylases J158_00992 SM00108 Bulb-type mannose-specific lectin J158_01001 SM00345 helix_turn_helix gluconate operon transcriptional repressor J158_01001 SM00895 J158_01001 J158_01008 SM00347 helix_turn_helix multiple antibiotic resistance protein J158_01020 SM00448 cheY-homologous receiver domain J158_01021 SM00387 Histidine kinase-like ATPases J158_01021 SM00388 His Kinase A (phosphoacceptor) domain J158_01021 SM00448 cheY-homologous receiver domain J158_01022 SM00421 helix_turn_helix, Lux Regulon J158_01035 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs J158_01035 SM00475 5'-3' exonuclease J158_01041 SM01002 Alanine dehydrogenase/PNT, C-terminal domain J158_01041 SM01003 Alanine dehydrogenase/PNT, N-terminal domain J158_01065 SM00852 Probable molybdopterin binding domain J158_01066 SM00028 Tetratricopeptide repeats J158_01067 SM00937 J158_01067 J158_01069 SM00028 Tetratricopeptide repeats J158_01073 SM01400 J158_01073 J158_01083 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. J158_01083 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. J158_01084 SM00649 Ribosomal protein L11/L12 J158_01090 SM00663 RNA polymerase I subunit A N-terminus J158_01093 SM00838 Elongation factor G C-terminus J158_01093 SM00889 Elongation factor G, domain IV J158_01095 SM01403 J158_01095 J158_01099 SM01382 J158_01099 J158_01099 SM01383 J158_01099 J158_01102 SM00322 K homology RNA-binding domain J158_01106 SM01374 J158_01106 J158_01107 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. J158_01119 SM00363 S4 RNA-binding domain J158_01119 SM01390 J158_01119 J158_01120 SM00662 RNA polymerases D J158_01128 SM00838 Elongation factor G C-terminus J158_01134 SM00829 Enoylreductase J158_01143 SM00382 ATPases associated with a variety of cellular activities J158_01145 SM00829 Enoylreductase J158_01150 SM00855 Phosphoglycerate mutase family J158_01161 SM00014 Acid phosphatase homologues J158_01165 SM00091 PAS domain J158_01165 SM00387 Histidine kinase-like ATPases J158_01165 SM00388 His Kinase A (phosphoacceptor) domain J158_01166 SM00448 cheY-homologous receiver domain J158_01166 SM00862 Transcriptional regulatory protein, C terminal J158_01170 SM01329 J158_01170 J158_01204 SM00387 Histidine kinase-like ATPases J158_01205 SM00091 PAS domain J158_01209 SM00382 ATPases associated with a variety of cellular activities J158_01209 SM00994 ClpX C4-type zinc finger J158_01209 SM01086 C-terminal, D2-small domain, of ClpB protein J158_01210 SM00382 ATPases associated with a variety of cellular activities J158_01210 SM00464 Found in ATP-dependent protease La (LON) J158_01211 SM00411 bacterial (prokaryotic) histone like domain J158_01217 SM00257 Lysin motif J158_01218 SM00849 Metallo-beta-lactamase superfamily J158_01221 SM00479 J158_01221 J158_01222 SM00331 Sigma factor PP2C-like phosphatases J158_01222 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain J158_01227 SM00849 Metallo-beta-lactamase superfamily J158_01228 SM00729 Elongator protein 3, MiaB family, Radical SAM J158_01241 SM00382 ATPases associated with a variety of cellular activities J158_01243 SM00493 J158_01243 J158_01246 SM00460 Transglutaminase/protease-like homologues J158_01248 SM00382 ATPases associated with a variety of cellular activities J158_01257 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. J158_01258 SM00822 J158_01258 J158_01260 SM00825 Beta-ketoacyl synthase J158_01267 SM00382 ATPases associated with a variety of cellular activities J158_01276 SM01359 J158_01276 J158_01276 SM01360 J158_01276 J158_01283 SM00271 DnaJ molecular chaperone homology domain J158_01285 SM00448 cheY-homologous receiver domain J158_01287 SM00244 prohibitin homologues J158_01288 SM00244 prohibitin homologues J158_01289 SM01321 J158_01289 J158_01290 SM00788 Adenylosuccinate synthetase J158_01293 SM00822 J158_01293 J158_01303 SM00220 Serine/Threonine protein kinases, catalytic domain J158_01307 SM00855 Phosphoglycerate mutase family J158_01318 SM00052 Putative diguanylate phosphodiesterase J158_01319 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J158_01321 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J158_01322 SM01092 CO dehydrogenase flavoprotein C-terminal domain J158_01325 SM00974 J158_01325 J158_01329 SM00966 SpoVT / AbrB like domain J158_01333 SM00481 DNA polymerase alpha chain like domain J158_01335 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J158_01342 SM00091 PAS domain J158_01342 SM00342 helix_turn_helix, arabinose operon control protein J158_01347 SM01060 J158_01347 J158_01359 SM00448 cheY-homologous receiver domain J158_01359 SM00862 Transcriptional regulatory protein, C terminal J158_01360 SM00387 Histidine kinase-like ATPases J158_01360 SM00388 His Kinase A (phosphoacceptor) domain J158_01367 SM00421 helix_turn_helix, Lux Regulon J158_01367 SM00448 cheY-homologous receiver domain J158_01370 SM00478 endonuclease III J158_01374 SM00244 prohibitin homologues J158_01392 SM00904 Riboflavin kinase J158_01401 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J158_01402 SM00382 ATPases associated with a variety of cellular activities J158_01404 SM00862 Transcriptional regulatory protein, C terminal J158_01405 SM00342 helix_turn_helix, arabinose operon control protein J158_01412 SM00387 Histidine kinase-like ATPases J158_01412 SM00388 His Kinase A (phosphoacceptor) domain J158_01413 SM00387 Histidine kinase-like ATPases J158_01413 SM00388 His Kinase A (phosphoacceptor) domain J158_01413 SM00448 cheY-homologous receiver domain J158_01418 SM00387 Histidine kinase-like ATPases J158_01418 SM00388 His Kinase A (phosphoacceptor) domain J158_01418 SM00448 cheY-homologous receiver domain J158_01420 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J158_01420 SM00387 Histidine kinase-like ATPases J158_01420 SM00388 His Kinase A (phosphoacceptor) domain J158_01420 SM00448 cheY-homologous receiver domain J158_01421 SM00091 PAS domain J158_01421 SM00387 Histidine kinase-like ATPases J158_01421 SM00388 His Kinase A (phosphoacceptor) domain J158_01422 SM00448 cheY-homologous receiver domain J158_01424 SM00813 Alpha-L-arabinofuranosidase C-terminus J158_01427 SM00382 ATPases associated with a variety of cellular activities J158_01427 SM00962 SRP54-type protein, GTPase domain J158_01427 SM00963 SRP54-type protein, helical bundle domain J158_01441 SM00533 DNA-binding domain of DNA mismatch repair MUTS family J158_01441 SM00534 ATPase domain of DNA mismatch repair MUTS family J158_01446 SM00812 Alpha-L-fucosidase J158_01451 SM00530 Helix-turn-helix XRE-family like proteins J158_01461 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J158_01462 SM00838 Elongation factor G C-terminus J158_01465 SM00358 Double-stranded RNA binding motif J158_01465 SM00535 Ribonuclease III family J158_01468 SM00448 cheY-homologous receiver domain J158_01470 SM01118 J158_01470 J158_01477 SM00357 Cold shock protein domain J158_01480 SM00487 DEAD-like helicases superfamily J158_01480 SM00490 helicase superfamily c-terminal domain J158_01486 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J158_01486 SM00267 diguanylate cyclase J158_01490 SM00869 Autotransporter beta-domain J158_01491 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J158_01492 SM00671 Sel1-like repeats. J158_01492 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. J158_01531 SM00382 ATPases associated with a variety of cellular activities J158_01548 SM00481 DNA polymerase alpha chain like domain J158_01556 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J158_01562 SM00267 diguanylate cyclase J158_01567 SM00972 Spore Coat Protein U domain J158_01570 SM00972 Spore Coat Protein U domain J158_01572 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J158_01576 SM01172 J158_01576 J158_01577 SM00710 Parallel beta-helix repeats J158_01577 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses J158_01584 SM00434 DNA Topoisomerase IV J158_01585 SM00342 helix_turn_helix, arabinose operon control protein J158_01586 SM00347 helix_turn_helix multiple antibiotic resistance protein J158_01591 SM01217 J158_01591 J158_01592 SM00631 J158_01592 J158_01598 SM00347 helix_turn_helix multiple antibiotic resistance protein J158_01602 SM00382 ATPases associated with a variety of cellular activities J158_01605 SM00947 Carbonic anhydrase J158_01608 SM00357 Cold shock protein domain J158_01631 SM00267 diguanylate cyclase J158_01633 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J158_01633 SM00267 diguanylate cyclase J158_01669 SM00271 DnaJ molecular chaperone homology domain J158_01678 SM00382 ATPases associated with a variety of cellular activities J158_01683 SM00861 Transketolase, pyrimidine binding domain J158_01685 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. J158_01689 SM00116 Domain in cystathionine beta-synthase and other proteins. J158_01689 SM01091 Transporter associated domain J158_01695 SM00382 ATPases associated with a variety of cellular activities J158_01696 SM00345 helix_turn_helix gluconate operon transcriptional repressor J158_01700 SM00984 UDP binding domain J158_01704 SM00354 helix_turn _helix lactose operon repressor J158_01708 SM01018 B12 binding domain J158_01710 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor J158_01714 SM00316 Ribosomal protein S1-like RNA-binding domain J158_01714 SM00357 Cold shock protein domain J158_01714 SM00955 J158_01714 J158_01716 SM00967 RNA 2'-O ribose methyltransferase substrate binding J158_01717 SM00267 diguanylate cyclase J158_01718 SM00479 J158_01718 J158_01721 SM00382 ATPases associated with a variety of cellular activities J158_01728 SM00947 Carbonic anhydrase J158_01730 SM00478 endonuclease III J158_01735 SM00450 Rhodanese Homology Domain J158_01737 SM00644 J158_01737 J158_01741 SM00382 ATPases associated with a variety of cellular activities J158_01742 SM00981 J158_01742 J158_01747 SM00479 J158_01747 J158_01752 SM00947 Carbonic anhydrase J158_01761 SM00421 helix_turn_helix, Lux Regulon J158_01761 SM00448 cheY-homologous receiver domain J158_01773 SM00968 SMC proteins Flexible Hinge Domain J158_01774 SM00771 ZipA, C-terminal domain (FtsZ-binding) J158_01777 SM00292 breast cancer carboxy-terminal domain J158_01777 SM00532 Ligase N family J158_01781 SM00434 DNA Topoisomerase IV J158_01782 SM00564 beta-propeller repeat J158_01789 SM00345 helix_turn_helix gluconate operon transcriptional repressor J158_01789 SM00866 J158_01789 J158_01794 SM00240 Forkhead associated domain J158_01798 SM00830 Chorismate mutase type II J158_01807 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J158_01807 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J158_01809 SM00347 helix_turn_helix multiple antibiotic resistance protein J158_01810 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J158_01810 SM00091 PAS domain J158_01810 SM00387 Histidine kinase-like ATPases J158_01810 SM00388 His Kinase A (phosphoacceptor) domain J158_01810 SM00448 cheY-homologous receiver domain J158_01811 SM00448 cheY-homologous receiver domain J158_01812 SM00382 ATPases associated with a variety of cellular activities J158_01813 SM00091 PAS domain J158_01813 SM00387 Histidine kinase-like ATPases J158_01813 SM00388 His Kinase A (phosphoacceptor) domain J158_01813 SM00448 cheY-homologous receiver domain J158_01844 SM00729 Elongator protein 3, MiaB family, Radical SAM J158_01846 SM00382 ATPases associated with a variety of cellular activities J158_01851 SM00116 Domain in cystathionine beta-synthase and other proteins. J158_01851 SM01091 Transporter associated domain J158_01856 SM00387 Histidine kinase-like ATPases J158_01856 SM00433 TopoisomeraseII J158_01861 SM01192 J158_01861 J158_01861 SM01193 J158_01861 J158_01866 SM00463 Small MutS-related domain J158_01870 SM00257 Lysin motif J158_01873 SM01103 J158_01873 J158_01875 SM00382 ATPases associated with a variety of cellular activities J158_01883 SM00382 ATPases associated with a variety of cellular activities J158_01885 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain J158_01888 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J158_01888 SM00091 PAS domain J158_01888 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J158_01898 SM00670 Large family of predicted nucleotide-binding domains J158_01902 SM01130 J158_01902 J158_01907 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain J158_01916 SM00758 J158_01916 J158_01923 SM00646 J158_01923 J158_01939 SM00052 Putative diguanylate phosphodiesterase J158_01939 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J158_01939 SM00267 diguanylate cyclase J158_01941 SM00448 cheY-homologous receiver domain J158_01942 SM00387 Histidine kinase-like ATPases J158_01944 SM00014 Acid phosphatase homologues J158_01959 SM00912 haemagglutination activity domain J158_01969 SM00100 Cyclic nucleotide-monophosphate binding domain J158_01969 SM00419 helix_turn_helix, cAMP Regulatory protein J158_01984 SM01007 Class II Aldolase and Adducin N-terminal domain J158_01993 SM00841 Elongation factor P, C-terminal J158_01993 SM01185 J158_01993 J158_01994 SM00822 J158_01994 J158_01998 SM00899 J158_01998 J158_02005 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain J158_02007 SM00851 MGS-like domain J158_02007 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J158_02018 SM00850 LytTr DNA-binding domain J158_02019 SM00937 J158_02019 J158_02021 SM00448 cheY-homologous receiver domain J158_02021 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J158_02022 SM00073 Histidine Phosphotransfer domain J158_02022 SM00387 Histidine kinase-like ATPases J158_02022 SM00388 His Kinase A (phosphoacceptor) domain J158_02022 SM00448 cheY-homologous receiver domain J158_02027 SM00966 SpoVT / AbrB like domain J158_02031 SM00052 Putative diguanylate phosphodiesterase J158_02031 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J158_02031 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J158_02031 SM00091 PAS domain J158_02031 SM00267 diguanylate cyclase J158_02032 SM00448 cheY-homologous receiver domain J158_02034 SM00138 Methyltransferase, chemotaxis proteins J158_02035 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J158_02035 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J158_02036 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J158_02036 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J158_02037 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J158_02037 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J158_02038 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J158_02038 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J158_02039 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J158_02039 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J158_02040 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J158_02040 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J158_02041 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J158_02044 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J158_02044 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J158_02045 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J158_02045 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J158_02045 SM01049 J158_02045 J158_02047 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J158_02047 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J158_02048 SM00073 Histidine Phosphotransfer domain J158_02048 SM00260 Two component signalling adaptor domain J158_02048 SM00387 Histidine kinase-like ATPases J158_02048 SM01231 J158_02048 J158_02049 SM00448 cheY-homologous receiver domain J158_02051 SM00260 Two component signalling adaptor domain J158_02057 SM00220 Serine/Threonine protein kinases, catalytic domain J158_02071 SM00530 Helix-turn-helix XRE-family like proteins J158_02076 SM00073 Histidine Phosphotransfer domain J158_02076 SM00260 Two component signalling adaptor domain J158_02076 SM00387 Histidine kinase-like ATPases J158_02076 SM01231 J158_02076 J158_02078 SM00448 cheY-homologous receiver domain J158_02081 SM00382 ATPases associated with a variety of cellular activities J158_02081 SM00962 SRP54-type protein, GTPase domain J158_02084 SM00052 Putative diguanylate phosphodiesterase J158_02084 SM00267 diguanylate cyclase J158_02085 SM00267 diguanylate cyclase J158_02086 SM00267 diguanylate cyclase J158_02097 SM00382 ATPases associated with a variety of cellular activities J158_02108 SM00822 J158_02108 J158_02113 SM00382 ATPases associated with a variety of cellular activities J158_02114 SM00448 cheY-homologous receiver domain J158_02116 SM00421 helix_turn_helix, Lux Regulon J158_02116 SM00448 cheY-homologous receiver domain J158_02124 SM00047 Lysozyme subfamily 2 J158_02133 SM00260 Two component signalling adaptor domain J158_02133 SM00448 cheY-homologous receiver domain J158_02134 SM00858 J158_02134 J158_02137 SM00387 Histidine kinase-like ATPases J158_02138 SM00052 Putative diguanylate phosphodiesterase J158_02138 SM00267 diguanylate cyclase J158_02138 SM00448 cheY-homologous receiver domain J158_02139 SM00091 PAS domain J158_02139 SM00387 Histidine kinase-like ATPases J158_02140 SM00052 Putative diguanylate phosphodiesterase J158_02140 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J158_02140 SM00091 PAS domain J158_02140 SM00267 diguanylate cyclase J158_02142 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J158_02147 SM00382 ATPases associated with a variety of cellular activities J158_02147 SM01086 C-terminal, D2-small domain, of ClpB protein J158_02148 SM00316 Ribosomal protein S1-like RNA-binding domain J158_02152 SM00382 ATPases associated with a variety of cellular activities J158_02152 SM00843 J158_02152 J158_02156 SM00382 ATPases associated with a variety of cellular activities J158_02163 SM00562 J158_02163 J158_02165 SM00028 Tetratricopeptide repeats J158_02168 SM00564 beta-propeller repeat J158_02169 SM00382 ATPases associated with a variety of cellular activities J158_02170 SM00852 Probable molybdopterin binding domain J158_02171 SM00450 Rhodanese Homology Domain J158_02180 SM00852 Probable molybdopterin binding domain J158_02185 SM00529 Helix-turn-helix diphteria tox regulatory element J158_02187 SM00479 J158_02187 J158_02201 SM00316 Ribosomal protein S1-like RNA-binding domain J158_02201 SM00732 Likely ribonuclease with RNase H fold. J158_02202 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J158_02202 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J158_02202 SM00091 PAS domain J158_02202 SM00387 Histidine kinase-like ATPases J158_02202 SM00388 His Kinase A (phosphoacceptor) domain J158_02202 SM00448 cheY-homologous receiver domain J158_02203 SM00448 cheY-homologous receiver domain J158_02220 SM00382 ATPases associated with a variety of cellular activities J158_02231 SM00382 ATPases associated with a variety of cellular activities J158_02233 SM00849 Metallo-beta-lactamase superfamily J158_02236 SM00382 ATPases associated with a variety of cellular activities J158_02239 SM00226 Low molecular weight phosphatase family J158_02241 SM00278 Helix-hairpin-helix DNA-binding motif class 1 J158_02241 SM00465 GIY-YIG type nucleases (URI domain) J158_02247 SM00823 Phosphopantetheine attachment site J158_02254 SM00984 UDP binding domain J158_02258 SM00450 Rhodanese Homology Domain J158_02259 SM00421 helix_turn_helix, Lux Regulon J158_02259 SM00448 cheY-homologous receiver domain J158_02260 SM00316 Ribosomal protein S1-like RNA-binding domain J158_02261 SM00363 S4 RNA-binding domain J158_02269 SM01034 Sensors of blue-light using FAD J158_02290 SM00448 cheY-homologous receiver domain J158_02290 SM00850 LytTr DNA-binding domain J158_02293 SM00869 Autotransporter beta-domain J158_02297 SM00387 Histidine kinase-like ATPases J158_02297 SM00388 His Kinase A (phosphoacceptor) domain J158_02298 SM00421 helix_turn_helix, Lux Regulon J158_02298 SM00448 cheY-homologous receiver domain J158_02299 SM00869 Autotransporter beta-domain J158_02300 SM00052 Putative diguanylate phosphodiesterase J158_02305 SM01012 J158_02305 J158_02314 SM00342 helix_turn_helix, arabinose operon control protein J158_02315 SM00387 Histidine kinase-like ATPases J158_02316 SM00421 helix_turn_helix, Lux Regulon J158_02316 SM00448 cheY-homologous receiver domain J158_02317 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J158_02324 SM00530 Helix-turn-helix XRE-family like proteins J158_02339 SM00966 SpoVT / AbrB like domain J158_02344 SM00965 Secretin and TonB N terminus short domain J158_02349 SM00736 Dystroglycan-type cadherin-like domains. J158_02354 SM00382 ATPases associated with a variety of cellular activities J158_02365 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain J158_02365 SM00437 Bacterial DNA topoisomerase I DNA-binding domain J158_02390 SM00342 helix_turn_helix, arabinose operon control protein J158_02399 SM00487 DEAD-like helicases superfamily J158_02450 SM00116 Domain in cystathionine beta-synthase and other proteins. J158_02450 SM01240 J158_02450 J158_02455 SM00822 J158_02455 J158_02457 SM00028 Tetratricopeptide repeats J158_02459 SM00411 bacterial (prokaryotic) histone like domain J158_02460 SM00316 Ribosomal protein S1-like RNA-binding domain J158_02476 SM00354 helix_turn _helix lactose operon repressor J158_02481 SM00363 S4 RNA-binding domain J158_02486 SM00382 ATPases associated with a variety of cellular activities J158_02496 SM00357 Cold shock protein domain J158_02497 SM00382 ATPases associated with a variety of cellular activities J158_02498 SM00382 ATPases associated with a variety of cellular activities J158_02504 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain J158_02506 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase J158_02509 SM00859 Semialdehyde dehydrogenase, NAD binding domain J158_02517 SM00840 J158_02517 J158_02521 SM01234 J158_02521 J158_02529 SM00849 Metallo-beta-lactamase superfamily J158_02534 SM00656 J158_02534 J158_02542 SM00841 Elongation factor P, C-terminal J158_02542 SM01185 J158_02542 J158_02544 SM00052 Putative diguanylate phosphodiesterase J158_02544 SM00267 diguanylate cyclase J158_02544 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J158_02551 SM00382 ATPases associated with a variety of cellular activities J158_02552 SM00487 DEAD-like helicases superfamily J158_02552 SM00490 helicase superfamily c-terminal domain J158_02557 SM00357 Cold shock protein domain J158_02558 SM01322 J158_02558 J158_02560 SM00052 Putative diguanylate phosphodiesterase J158_02560 SM00267 diguanylate cyclase J158_02563 SM00822 J158_02563 J158_02567 SM00853 MutL C terminal dimerisation domain J158_02567 SM01340 J158_02567 J158_02568 SM00646 J158_02568 J158_02575 SM00474 3'-5' exonuclease J158_02579 SM00528 Domain in histone-like proteins of HNS family J158_02597 SM00857 Resolvase, N terminal domain J158_02612 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J158_02612 SM00267 diguanylate cyclase J158_02613 SM00260 Two component signalling adaptor domain J158_02614 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J158_02614 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J158_02616 SM00487 DEAD-like helicases superfamily J158_02616 SM00490 helicase superfamily c-terminal domain J158_02627 SM00729 Elongator protein 3, MiaB family, Radical SAM J158_02632 SM00116 Domain in cystathionine beta-synthase and other proteins. J158_02632 SM01091 Transporter associated domain J158_02638 SM00382 ATPases associated with a variety of cellular activities J158_02644 SM01230 J158_02644 J158_02646 SM01230 J158_02646 J158_02648 SM00267 diguanylate cyclase J158_02648 SM00448 cheY-homologous receiver domain J158_02658 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J158_02658 SM00091 PAS domain J158_02658 SM00387 Histidine kinase-like ATPases J158_02658 SM00388 His Kinase A (phosphoacceptor) domain J158_02658 SM00448 cheY-homologous receiver domain J158_02658 SM01079 J158_02658 J158_02659 SM00448 cheY-homologous receiver domain J158_02659 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J158_02665 SM00354 helix_turn _helix lactose operon repressor J158_02676 SM01323 J158_02676 J158_02679 SM00344 helix_turn_helix ASNC type J158_02694 SM00387 Histidine kinase-like ATPases J158_02703 SM00944 Pro-kumamolisin, activation domain J158_02714 SM01130 J158_02714 J158_02719 SM00342 helix_turn_helix, arabinose operon control protein J158_02720 SM00382 ATPases associated with a variety of cellular activities J158_02720 SM00962 SRP54-type protein, GTPase domain J158_02720 SM00963 SRP54-type protein, helical bundle domain J158_02721 SM00478 endonuclease III J158_02723 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J158_02723 SM00091 PAS domain J158_02723 SM00387 Histidine kinase-like ATPases J158_02723 SM00388 His Kinase A (phosphoacceptor) domain J158_02723 SM00448 cheY-homologous receiver domain J158_02726 SM00465 GIY-YIG type nucleases (URI domain) J158_02732 SM00507 HNH nucleases J158_02733 SM00861 Transketolase, pyrimidine binding domain J158_02738 SM00849 Metallo-beta-lactamase superfamily J158_02755 SM00422 helix_turn_helix, mercury resistance J158_02756 SM00411 bacterial (prokaryotic) histone like domain J158_02757 SM00873 B3/4 domain J158_02757 SM00874 tRNA synthetase B5 domain J158_02757 SM00896 Ferredoxin-fold anticodon binding domain J158_02763 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain J158_02764 SM00354 helix_turn _helix lactose operon repressor J158_02765 SM00642 Alpha-amylase domain J158_02772 SM00642 Alpha-amylase domain J158_02783 SM00382 ATPases associated with a variety of cellular activities J158_02795 SM00487 DEAD-like helicases superfamily J158_02795 SM00490 helicase superfamily c-terminal domain J158_02846 SM01001 AIR carboxylase J158_02850 SM00316 Ribosomal protein S1-like RNA-binding domain J158_02850 SM00322 K homology RNA-binding domain J158_02851 SM01387 J158_02851 J158_02855 SM00316 Ribosomal protein S1-like RNA-binding domain J158_02855 SM00322 K homology RNA-binding domain J158_02865 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J158_02866 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J158_02875 SM00822 J158_02875 J158_02878 SM00052 Putative diguanylate phosphodiesterase J158_02878 SM00267 diguanylate cyclase J158_02878 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J158_02892 SM00859 Semialdehyde dehydrogenase, NAD binding domain J158_02898 SM00257 Lysin motif J158_02904 SM00729 Elongator protein 3, MiaB family, Radical SAM J158_02917 SM01160 J158_02917 J158_02928 SM00098 Alkaline phosphatase homologues J158_02929 SM00977 TilS substrate C-terminal domain J158_02932 SM01351 J158_02932 J158_02939 SM00316 Ribosomal protein S1-like RNA-binding domain J158_02965 SM00382 ATPases associated with a variety of cellular activities J158_02972 SM00448 cheY-homologous receiver domain J158_02972 SM00862 Transcriptional regulatory protein, C terminal J158_02973 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J158_02973 SM00387 Histidine kinase-like ATPases J158_02973 SM00388 His Kinase A (phosphoacceptor) domain J158_02979 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J158_02979 SM00267 diguanylate cyclase J158_02980 SM00363 S4 RNA-binding domain J158_02981 SM00052 Putative diguanylate phosphodiesterase J158_02981 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J158_02981 SM00091 PAS domain J158_02981 SM00267 diguanylate cyclase J158_02982 SM00487 DEAD-like helicases superfamily J158_02982 SM00490 helicase superfamily c-terminal domain J158_02991 SM00342 helix_turn_helix, arabinose operon control protein J158_02991 SM00478 endonuclease III J158_02991 SM01009 AlkA N-terminal domain J158_02995 SM00829 Enoylreductase J158_03009 SM00342 helix_turn_helix, arabinose operon control protein J158_03023 SM00645 Papain family cysteine protease J158_03024 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J158_03024 SM00387 Histidine kinase-like ATPases J158_03024 SM00388 His Kinase A (phosphoacceptor) domain J158_03025 SM00448 cheY-homologous receiver domain J158_03025 SM00862 Transcriptional regulatory protein, C terminal J158_03028 SM00487 DEAD-like helicases superfamily J158_03028 SM00490 helicase superfamily c-terminal domain J158_03028 SM00982 J158_03028 J158_03028 SM01058 CarD-like/TRCF domain J158_03035 SM00073 Histidine Phosphotransfer domain J158_03035 SM00260 Two component signalling adaptor domain J158_03035 SM00387 Histidine kinase-like ATPases J158_03035 SM01231 J158_03035 J158_03036 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J158_03036 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J158_03037 SM00260 Two component signalling adaptor domain J158_03038 SM00052 Putative diguanylate phosphodiesterase J158_03038 SM00448 cheY-homologous receiver domain J158_03039 SM00138 Methyltransferase, chemotaxis proteins J158_03040 SM00448 cheY-homologous receiver domain J158_03041 SM00155 Phospholipase D. Active site motifs. J158_03044 SM00855 Phosphoglycerate mutase family J158_03054 SM00248 ankyrin repeats J158_03064 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J158_03065 SM01092 CO dehydrogenase flavoprotein C-terminal domain J158_03067 SM00829 Enoylreductase J158_03068 SM00267 diguanylate cyclase J158_03081 SM00732 Likely ribonuclease with RNase H fold. J158_03088 SM00382 ATPases associated with a variety of cellular activities J158_03091 SM00411 bacterial (prokaryotic) histone like domain J158_03097 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain J158_03100 SM00382 ATPases associated with a variety of cellular activities J158_03106 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. J158_03107 SM00671 Sel1-like repeats. J158_03113 SM00054 EF-hand, calcium binding motif J158_03131 SM00116 Domain in cystathionine beta-synthase and other proteins. J158_03135 SM00382 ATPases associated with a variety of cellular activities J158_03144 SM00924 MgtE intracellular N domain J158_03150 SM00656 J158_03150 J158_03152 SM00421 helix_turn_helix, Lux Regulon J158_03158 SM00849 Metallo-beta-lactamase superfamily J158_03160 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. J158_03164 SM00422 helix_turn_helix, mercury resistance J158_03191 SM00342 helix_turn_helix, arabinose operon control protein J158_03193 SM00387 Histidine kinase-like ATPases J158_03193 SM00388 His Kinase A (phosphoacceptor) domain J158_03193 SM00448 cheY-homologous receiver domain J158_03194 SM00387 Histidine kinase-like ATPases J158_03194 SM00388 His Kinase A (phosphoacceptor) domain J158_03194 SM00448 cheY-homologous receiver domain J158_03196 SM00387 Histidine kinase-like ATPases J158_03196 SM00388 His Kinase A (phosphoacceptor) domain J158_03196 SM00448 cheY-homologous receiver domain J158_03197 SM00867 YceI-like domain J158_03199 SM00867 YceI-like domain J158_03211 SM00116 Domain in cystathionine beta-synthase and other proteins. J158_03217 SM00028 Tetratricopeptide repeats J158_03237 SM00812 Alpha-L-fucosidase J158_03238 SM00636 J158_03238 J158_03241 SM00758 J158_03241 J158_03241 SM01217 J158_03241 J158_03247 SM01149 J158_03247 J158_03254 SM00369 Leucine-rich repeats, typical (most populated) subfamily J158_03258 SM00260 Two component signalling adaptor domain J158_03260 SM00073 Histidine Phosphotransfer domain J158_03260 SM00260 Two component signalling adaptor domain J158_03260 SM00387 Histidine kinase-like ATPases J158_03260 SM00448 cheY-homologous receiver domain J158_03260 SM01231 J158_03260 J158_03261 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J158_03262 SM00260 Two component signalling adaptor domain J158_03263 SM00448 cheY-homologous receiver domain J158_03264 SM00448 cheY-homologous receiver domain J158_03269 SM00491 J158_03269 J158_03274 SM00954 Region found in RelA / SpoT proteins J158_03283 SM00382 ATPases associated with a variety of cellular activities J158_03283 SM00487 DEAD-like helicases superfamily J158_03283 SM00490 helicase superfamily c-terminal domain J158_03283 SM00847 Helicase associated domain (HA2) Add an annotation J158_03285 SM00341 Helicase and RNase D C-terminal J158_03285 SM00487 DEAD-like helicases superfamily J158_03285 SM00490 helicase superfamily c-terminal domain J158_03285 SM00956 J158_03285 J158_03287 SM00448 cheY-homologous receiver domain J158_03292 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J158_03292 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J158_03295 SM00448 cheY-homologous receiver domain J158_03296 SM00091 PAS domain J158_03296 SM00911 HWE histidine kinase J158_03307 SM00382 ATPases associated with a variety of cellular activities J158_03310 SM00278 Helix-hairpin-helix DNA-binding motif class 1 J158_03317 SM00834 Putative regulatory protein J158_03326 SM00382 ATPases associated with a variety of cellular activities J158_03346 SM00855 Phosphoglycerate mutase family J158_03358 SM00382 ATPases associated with a variety of cellular activities J158_03358 SM01086 C-terminal, D2-small domain, of ClpB protein J158_03359 SM00382 ATPases associated with a variety of cellular activities J158_03361 SM00062 Bacterial periplasmic substrate-binding proteins J158_03376 SM00564 beta-propeller repeat J158_03377 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J158_03398 SM01126 J158_03398 J158_03400 SM00881 CoA binding domain J158_03402 SM00387 Histidine kinase-like ATPases J158_03402 SM00388 His Kinase A (phosphoacceptor) domain J158_03403 SM00382 ATPases associated with a variety of cellular activities J158_03403 SM00448 cheY-homologous receiver domain J158_03417 SM00387 Histidine kinase-like ATPases J158_03417 SM00388 His Kinase A (phosphoacceptor) domain J158_03418 SM00448 cheY-homologous receiver domain J158_03418 SM00862 Transcriptional regulatory protein, C terminal J158_03421 SM00642 Alpha-amylase domain J158_03422 SM00528 Domain in histone-like proteins of HNS family J158_03424 SM00318 Staphylococcal nuclease homologues J158_03439 SM00387 Histidine kinase-like ATPases J158_03439 SM00388 His Kinase A (phosphoacceptor) domain J158_03440 SM00448 cheY-homologous receiver domain J158_03442 SM00646 J158_03442 J158_03451 SM00530 Helix-turn-helix XRE-family like proteins J158_03455 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J158_03455 SM00387 Histidine kinase-like ATPases J158_03459 SM00255 Toll - interleukin 1 - resistance J158_03463 SM00869 Autotransporter beta-domain J158_03473 SM00354 helix_turn _helix lactose operon repressor J158_03479 SM00967 RNA 2'-O ribose methyltransferase substrate binding J158_03500 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J158_03500 SM00387 Histidine kinase-like ATPases J158_03506 SM00506 Appr-1"-p processing enzyme J158_03515 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J158_03520 SM00849 Metallo-beta-lactamase superfamily J158_03523 SM00382 ATPases associated with a variety of cellular activities J158_03535 SM00861 Transketolase, pyrimidine binding domain J158_03538 SM00028 Tetratricopeptide repeats J158_03538 SM00327 von Willebrand factor (vWF) type A domain J158_03539 SM00327 von Willebrand factor (vWF) type A domain J158_03542 SM00382 ATPases associated with a variety of cellular activities J158_03544 SM00965 Secretin and TonB N terminus short domain J158_03554 SM00487 DEAD-like helicases superfamily J158_03554 SM00490 helicase superfamily c-terminal domain J158_03556 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. J158_03556 SM00954 Region found in RelA / SpoT proteins J158_03557 SM01409 J158_03557 J158_03558 SM00072 Guanylate kinase homologues. J158_03563 SM00729 Elongator protein 3, MiaB family, Radical SAM J158_03568 SM01011 Aminopeptidase P, N-terminal domain J158_03583 SM00028 Tetratricopeptide repeats J158_03583 SM00382 ATPases associated with a variety of cellular activities J158_03583 SM00421 helix_turn_helix, Lux Regulon J158_03597 SM00464 Found in ATP-dependent protease La (LON) J158_03607 SM00342 helix_turn_helix, arabinose operon control protein J158_03608 SM00862 Transcriptional regulatory protein, C terminal J158_03612 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J158_03618 SM00917 LeuA allosteric (dimerisation) domain J158_03619 SM01329 J158_03619 J158_03623 SM00267 diguanylate cyclase J158_03633 SM00919 Malic enzyme, NAD binding domain J158_03633 SM01274 J158_03633 J158_03636 SM00387 Histidine kinase-like ATPases J158_03636 SM00388 His Kinase A (phosphoacceptor) domain J158_03636 SM00448 cheY-homologous receiver domain J158_03644 SM00421 helix_turn_helix, Lux Regulon J158_03644 SM00448 cheY-homologous receiver domain J158_03646 SM00387 Histidine kinase-like ATPases J158_03646 SM00388 His Kinase A (phosphoacceptor) domain J158_03647 SM00448 cheY-homologous receiver domain J158_03647 SM00862 Transcriptional regulatory protein, C terminal J158_03651 SM00822 J158_03651 J158_03652 SM00354 helix_turn _helix lactose operon repressor J158_03655 SM00642 Alpha-amylase domain J158_03657 SM01154 J158_03657 J158_03664 SM00450 Rhodanese Homology Domain J158_03677 SM00028 Tetratricopeptide repeats J158_03692 SM00345 helix_turn_helix gluconate operon transcriptional repressor J158_03692 SM00866 J158_03692 J158_03705 SM00382 ATPases associated with a variety of cellular activities J158_03710 SM01211 J158_03710 J158_03723 SM00656 J158_03723 J158_03729 SM00528 Domain in histone-like proteins of HNS family J158_03732 SM00382 ATPases associated with a variety of cellular activities J158_03738 SM00882 Coenzyme A transferase J158_03739 SM00882 Coenzyme A transferase J158_03742 SM00984 UDP binding domain J158_03747 SM00893 Electron transfer flavoprotein domain J158_03748 SM00893 Electron transfer flavoprotein domain J158_03762 SM00382 ATPases associated with a variety of cellular activities J158_03765 SM00116 Domain in cystathionine beta-synthase and other proteins. J158_03772 SM00487 DEAD-like helicases superfamily J158_03772 SM00490 helicase superfamily c-terminal domain J158_03779 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J158_03786 SM00825 Beta-ketoacyl synthase J158_03801 SM00382 ATPases associated with a variety of cellular activities J158_03805 SM00382 ATPases associated with a variety of cellular activities J158_03805 SM00387 Histidine kinase-like ATPases J158_03805 SM00448 cheY-homologous receiver domain J158_03808 SM00830 Chorismate mutase type II J158_03810 SM00382 ATPases associated with a variety of cellular activities J158_03824 SM00986 Uracil DNA glycosylase superfamily J158_03824 SM00987 UreE urease accessory protein, C-terminal domain J158_03830 SM00382 ATPases associated with a variety of cellular activities J158_03830 SM00930 J158_03830 J158_03834 SM00387 Histidine kinase-like ATPases J158_03834 SM00388 His Kinase A (phosphoacceptor) domain J158_03834 SM00448 cheY-homologous receiver domain J158_03844 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J158_03844 SM00091 PAS domain J158_03844 SM00387 Histidine kinase-like ATPases J158_03844 SM00388 His Kinase A (phosphoacceptor) domain J158_03844 SM00448 cheY-homologous receiver domain J158_03848 SM01005 Alanine racemase, C-terminal domain J158_03850 SM00344 helix_turn_helix ASNC type J158_03861 SM00382 ATPases associated with a variety of cellular activities J158_03863 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. J158_03864 SM00986 Uracil DNA glycosylase superfamily J158_03864 SM00987 UreE urease accessory protein, C-terminal domain J158_03865 SM00729 Elongator protein 3, MiaB family, Radical SAM J158_03878 SM00448 cheY-homologous receiver domain J158_03878 SM00850 LytTr DNA-binding domain J158_03879 SM00387 Histidine kinase-like ATPases J158_03886 SM00091 PAS domain J158_03886 SM00138 Methyltransferase, chemotaxis proteins J158_03886 SM00911 HWE histidine kinase J158_03887 SM00448 cheY-homologous receiver domain J158_03889 SM00382 ATPases associated with a variety of cellular activities J158_03889 SM00448 cheY-homologous receiver domain J158_03900 SM00382 ATPases associated with a variety of cellular activities J158_03915 SM00382 ATPases associated with a variety of cellular activities J158_03916 SM00631 J158_03916 J158_03924 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). J158_03924 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J158_03925 SM00477 DNA/RNA non-specific endonuclease J158_03925 SM00892 DNA/RNA non-specific endonuclease J158_03956 SM00257 Lysin motif J158_03961 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain J158_03961 SM00437 Bacterial DNA topoisomerase I DNA-binding domain J158_03961 SM00493 J158_03961 J158_03972 SM00487 DEAD-like helicases superfamily J158_03972 SM00490 helicase superfamily c-terminal domain J158_03979 SM00986 Uracil DNA glycosylase superfamily J158_03979 SM00987 UreE urease accessory protein, C-terminal domain J158_03980 SM00448 cheY-homologous receiver domain J158_03982 SM00382 ATPases associated with a variety of cellular activities J158_03983 SM00487 DEAD-like helicases superfamily J158_03983 SM00490 helicase superfamily c-terminal domain J158_03985 SM00357 Cold shock protein domain J158_03985 SM00382 ATPases associated with a variety of cellular activities J158_03985 SM00959 Rho termination factor, N-terminal domain J158_03991 SM00487 DEAD-like helicases superfamily J158_04000 SM00257 Lysin motif J158_04006 SM01150 J158_04006 J158_04015 SM00644 J158_04015 J158_04017 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain J158_04024 SM01217 J158_04024 J158_04025 SM00905 Dihydroneopterin aldolase J158_04030 SM00400 zinc finger J158_04030 SM00493 J158_04030 J158_04030 SM00766 DNA primase DnaG DnaB-binding J158_04052 SM00363 S4 RNA-binding domain J158_04061 SM00470 ParB-like nuclease domain J158_04065 SM01259 J158_04065 J158_04071 SM00836 DALR anticodon binding domain J158_04071 SM01016 Arginyl tRNA synthetase N terminal dom J158_04077 SM00823 Phosphopantetheine attachment site J158_04077 SM00824 Thioesterase J158_04084 SM00938 Nitrogen regulatory protein P-II J158_04086 SM00382 ATPases associated with a variety of cellular activities J158_04089 SM00052 Putative diguanylate phosphodiesterase J158_04097 SM00244 prohibitin homologues J158_04107 SM00448 cheY-homologous receiver domain J158_04107 SM00862 Transcriptional regulatory protein, C terminal J158_04108 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain J158_04108 SM00387 Histidine kinase-like ATPases J158_04108 SM00388 His Kinase A (phosphoacceptor) domain J158_04112 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. J158_04121 SM01060 J158_04121 J158_04124 SM00421 helix_turn_helix, Lux Regulon J158_04124 SM00448 cheY-homologous receiver domain J158_04127 SM00382 ATPases associated with a variety of cellular activities J158_04136 SM00849 Metallo-beta-lactamase superfamily J158_04142 SM00960 Roadblock/LC7 domain J158_04155 SM00387 Histidine kinase-like ATPases J158_04155 SM00388 His Kinase A (phosphoacceptor) domain J158_04156 SM00448 cheY-homologous receiver domain J158_04156 SM00862 Transcriptional regulatory protein, C terminal J158_04160 SM00248 ankyrin repeats J158_04161 SM01060 J158_04161 J158_04162 SM00491 J158_04162 J158_04168 SM00477 DNA/RNA non-specific endonuclease J158_04168 SM00892 DNA/RNA non-specific endonuclease J158_04171 SM01004 Delta-aminolevulinic acid dehydratase J158_04179 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. J158_04183 SM00382 ATPases associated with a variety of cellular activities J158_04185 SM00530 Helix-turn-helix XRE-family like proteins J158_04193 SM00342 helix_turn_helix, arabinose operon control protein J158_04195 SM00382 ATPases associated with a variety of cellular activities J158_04208 SM00881 CoA binding domain J158_04209 SM00116 Domain in cystathionine beta-synthase and other proteins. J158_04209 SM00924 MgtE intracellular N domain J158_04210 SM01057 Eukaryotic-type carbonic anhydrase J158_04215 SM00248 ankyrin repeats J158_04217 SM00825 Beta-ketoacyl synthase J158_04222 SM00822 J158_04222 J158_04231 SM00563 Phosphate acyltransferases J158_04242 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs J158_04242 SM00474 3'-5' exonuclease J158_04242 SM00475 5'-3' exonuclease J158_04242 SM00482 DNA polymerase A domain J158_04245 SM00912 haemagglutination activity domain J158_04249 SM00331 Sigma factor PP2C-like phosphatases J158_04249 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain J158_04254 SM00240 Forkhead associated domain J158_04257 SM00028 Tetratricopeptide repeats J158_04259 SM00220 Serine/Threonine protein kinases, catalytic domain J158_04263 SM00965 Secretin and TonB N terminus short domain J158_04265 SM00915 Jacalin-like lectin domain J158_04271 SM00382 ATPases associated with a variety of cellular activities J158_04271 SM01086 C-terminal, D2-small domain, of ClpB protein J158_04279 SM00342 helix_turn_helix, arabinose operon control protein J158_04281 SM01266 J158_04281 J158_04284 SM00155 Phospholipase D. Active site motifs. J158_04313 SM00421 helix_turn_helix, Lux Regulon J158_04313 SM00448 cheY-homologous receiver domain J158_04323 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain J158_04327 SM00346 helix_turn_helix isocitrate lyase regulation J158_04329 SM00091 PAS domain J158_04329 SM00387 Histidine kinase-like ATPases J158_04329 SM00388 His Kinase A (phosphoacceptor) domain J158_04329 SM00448 cheY-homologous receiver domain J158_04334 SM00564 beta-propeller repeat J158_04344 SM00382 ATPases associated with a variety of cellular activities J158_04346 SM00836 DALR anticodon binding domain J158_04348 SM00382 ATPases associated with a variety of cellular activities J158_04362 SM00354 helix_turn _helix lactose operon repressor J158_04365 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain J158_04367 SM00758 J158_04367 J158_04367 SM01217 J158_04367 J158_04371 SM00612 J158_04371 J158_04378 SM01007 Class II Aldolase and Adducin N-terminal domain J158_04383 SM00633 Glycosyl hydrolase family 10 J158_04386 SM00633 Glycosyl hydrolase family 10 J158_04388 SM00633 Glycosyl hydrolase family 10 J158_04400 SM00829 Enoylreductase J158_04401 SM00563 Phosphate acyltransferases J158_04403 SM00354 helix_turn _helix lactose operon repressor J158_04407 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family J158_04415 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J158_04415 SM00388 His Kinase A (phosphoacceptor) domain J158_04418 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain J158_04418 SM01232 J158_04418 J158_04426 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J158_04426 SM00091 PAS domain J158_04437 SM00347 helix_turn_helix multiple antibiotic resistance protein J158_04444 SM00155 Phospholipase D. Active site motifs. J158_04460 SM00796 Allophanate hydrolase subunit 1 J158_04460 SM00797 Allophanate hydrolase subunit 2 J158_04460 SM00878 Biotin carboxylase C-terminal domain J158_04474 SM00382 ATPases associated with a variety of cellular activities J158_04484 SM00829 Enoylreductase J158_04492 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. J158_04492 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) J158_04492 SM00091 PAS domain J158_04492 SM00267 diguanylate cyclase J158_04498 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase J158_04504 SM00014 Acid phosphatase homologues J158_04506 SM00028 Tetratricopeptide repeats