BER92_00005	SSF48295	TrpR-like
BER92_00005	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_00010	SSF55979	DNA clamp
BER92_00020	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_00025	SSF54211	Ribosomal protein S5 domain 2-like
BER92_00025	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER92_00025	SSF56719	Type II DNA topoisomerase
BER92_00040	SSF48452	TPR-like
BER92_00045	SSF74653	TolA/TonB C-terminal domain
BER92_00075	SSF63892	Pyridoxine 5'-phosphate synthase
BER92_00085	SSF56024	Phospholipase D/nuclease
BER92_00100	SSF56935	Porins
BER92_00105	SSF144091	Rhomboid-like
BER92_00115	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_00115	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
BER92_00120	SSF50156	PDZ domain-like
BER92_00120	SSF52096	ClpP/crotonase
BER92_00125	SSF51261	Duplicated hybrid motif
BER92_00130	SSF52025	PA domain
BER92_00130	SSF53187	Zn-dependent exopeptidases
BER92_00145	SSF55103	FAD-linked oxidases, C-terminal domain
BER92_00145	SSF56176	FAD-binding/transporter-associated domain-like
BER92_00165	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_00175	SSF52096	ClpP/crotonase
BER92_00195	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_00210	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
BER92_00210	SSF88946	Sigma2 domain of RNA polymerase sigma factors
BER92_00215	SSF52141	Uracil-DNA glycosylase-like
BER92_00220	SSF52172	CheY-like
BER92_00230	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_00235	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_00240	SSF52833	Thioredoxin-like
BER92_00245	SSF50249	Nucleic acid-binding proteins
BER92_00245	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_00245	SSF68912	Rho N-terminal domain-like
BER92_00255	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
BER92_00275	SSF54106	LysM domain
BER92_00280	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
BER92_00290	SSF111369	HlyD-like secretion proteins
BER92_00295	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
BER92_00295	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
BER92_00295	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
BER92_00300	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
BER92_00300	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
BER92_00300	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
BER92_00330	SSF74650	Galactose mutarotase-like
BER92_00330	SSF81296	E set domains
BER92_00335	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_00335	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
BER92_00340	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_00370	SSF46785	"Winged helix" DNA-binding domain
BER92_00400	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
BER92_00405	SSF50129	GroES-like
BER92_00405	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_00415	SSF53098	Ribonuclease H-like
BER92_00460	SSF46689	Homeodomain-like
BER92_00465	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_00470	SSF51905	FAD/NAD(P)-binding domain
BER92_00505	SSF46785	"Winged helix" DNA-binding domain
BER92_00515	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_00520	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
BER92_00520	SSF51230	Single hybrid motif
BER92_00520	SSF52777	CoA-dependent acyltransferases
BER92_00525	SSF50044	SH3-domain
BER92_00530	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
BER92_00530	SSF52922	TK C-terminal domain-like
BER92_00535	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
BER92_00540	SSF140959	Indolic compounds 2,3-dioxygenase-like
BER92_00545	SSF103473	MFS general substrate transporter
BER92_00550	SSF52833	Thioredoxin-like
BER92_00560	SSF46785	"Winged helix" DNA-binding domain
BER92_00565	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
BER92_00570	SSF51182	RmlC-like cupins
BER92_00595	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
BER92_00595	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_00610	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_00615	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
BER92_00615	SSF63380	Riboflavin synthase domain-like
BER92_00625	SSF53474	alpha/beta-Hydrolases
BER92_00630	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_00640	SSF74653	TolA/TonB C-terminal domain
BER92_00655	SSF47616	GST C-terminal domain-like
BER92_00655	SSF52833	Thioredoxin-like
BER92_00660	SSF53098	Ribonuclease H-like
BER92_00750	SSF69255	gp5 N-terminal domain-like
BER92_00750	SSF69279	Phage tail proteins
BER92_00755	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_00760	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_00860	SSF160719	gpW/gp25-like
BER92_00925	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
BER92_00925	SSF88946	Sigma2 domain of RNA polymerase sigma factors
BER92_00930	SSF69500	DTD-like
BER92_00940	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BER92_00945	SSF142695	RibA-like
BER92_00960	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BER92_00965	SSF53448	Nucleotide-diphospho-sugar transferases
BER92_00980	SSF48013	NusB-like
BER92_00980	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_00985	SSF50486	FMT C-terminal domain-like
BER92_00985	SSF53328	Formyltransferase
BER92_00990	SSF56420	Peptide deformylase
BER92_00995	SSF54106	LysM domain
BER92_01000	SSF102405	MCP/YpsA-like
BER92_01020	SSF56712	Prokaryotic type I DNA topoisomerase
BER92_01025	SSF55821	YrdC/RibB
BER92_01050	SSF56935	Porins
BER92_01075	SSF50998	Quinoprotein alcohol dehydrogenase-like
BER92_01080	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_01085	SSF103473	MFS general substrate transporter
BER92_01095	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER92_01095	SSF52172	CheY-like
BER92_01095	SSF55785	PYP-like sensor domain (PAS domain)
BER92_01095	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER92_01105	SSF46785	"Winged helix" DNA-binding domain
BER92_01105	SSF55781	GAF domain-like
BER92_01110	SSF103473	MFS general substrate transporter
BER92_01115	SSF54909	Dimeric alpha+beta barrel
BER92_01120	SSF51604	Enolase C-terminal domain-like
BER92_01120	SSF54826	Enolase N-terminal domain-like
BER92_01125	SSF56529	FAH
BER92_01130	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_01135	SSF51556	Metallo-dependent hydrolases
BER92_01140	SSF51430	NAD(P)-linked oxidoreductase
BER92_01145	SSF46894	C-terminal effector domain of the bipartite response regulators
BER92_01145	SSF52172	CheY-like
BER92_01150	SSF56801	Acetyl-CoA synthetase-like
BER92_01155	SSF56935	Porins
BER92_01170	SSF56219	DNase I-like
BER92_01175	SSF51316	Mss4-like
BER92_01185	SSF56214	4'-phosphopantetheinyl transferase
BER92_01195	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_01200	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
BER92_01210	SSF143800	L28p-like
BER92_01215	SSF57829	Zn-binding ribosomal proteins
BER92_01220	SSF56024	Phospholipase D/nuclease
BER92_01225	SSF51905	FAD/NAD(P)-binding domain
BER92_01230	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_01260	SSF46785	"Winged helix" DNA-binding domain
BER92_01260	SSF50037	C-terminal domain of transcriptional repressors
BER92_01260	SSF55681	Class II aaRS and biotin synthetases
BER92_01265	SSF53067	Actin-like ATPase domain
BER92_01270	SSF110997	Sporulation related repeat
BER92_01285	SSF53098	Ribonuclease H-like
BER92_01290	SSF46689	Homeodomain-like
BER92_01320	SSF53474	alpha/beta-Hydrolases
BER92_01335	SSF160113	YegP-like
BER92_01335	SSF52374	Nucleotidylyl transferase
BER92_01350	SSF52768	Arginase/deacetylase
BER92_01375	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_01385	SSF81342	Transmembrane di-heme cytochromes
BER92_01390	SSF56634	Heme-dependent catalase-like
BER92_01400	SSF53187	Zn-dependent exopeptidases
BER92_01405	SSF56784	HAD-like
BER92_01430	SSF50156	PDZ domain-like
BER92_01430	SSF50494	Trypsin-like serine proteases
BER92_01435	SSF58113	Apolipoprotein A-I
BER92_01450	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER92_01450	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER92_01455	SSF46894	C-terminal effector domain of the bipartite response regulators
BER92_01455	SSF52172	CheY-like
BER92_01490	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_01545	SSF103365	Hypothetical protein PH1602
BER92_01550	SSF46689	Homeodomain-like
BER92_01555	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
BER92_01555	SSF54292	2Fe-2S ferredoxin-like
BER92_01555	SSF63380	Riboflavin synthase domain-like
BER92_01565	SSF141868	EAL domain-like
BER92_01570	SSF50814	Lipocalins
BER92_01580	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_01580	SSF54211	Ribosomal protein S5 domain 2-like
BER92_01590	SSF54913	GlnB-like
BER92_01595	SSF51445	(Trans)glycosidases
BER92_01595	SSF55545	beta-N-acetylhexosaminidase-like domain
BER92_01615	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_01620	SSF50621	Alanine racemase C-terminal domain-like
BER92_01620	SSF51419	PLP-binding barrel
BER92_01640	SSF47807	5' to 3' exonuclease, C-terminal subdomain
BER92_01640	SSF53098	Ribonuclease H-like
BER92_01640	SSF56672	DNA/RNA polymerases
BER92_01640	SSF88723	PIN domain-like
BER92_01645	SSF102886	Coproporphyrinogen III oxidase
BER92_01665	SSF53474	alpha/beta-Hydrolases
BER92_01665	SSF82171	DPP6 N-terminal domain-like
BER92_01670	SSF56801	Acetyl-CoA synthetase-like
BER92_01675	SSF55298	YjgF-like
BER92_01680	SSF51905	FAD/NAD(P)-binding domain
BER92_01685	SSF47336	ACP-like
BER92_01695	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
BER92_01700	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
BER92_01715	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
BER92_01720	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
BER92_01730	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_01735	SSF51905	FAD/NAD(P)-binding domain
BER92_01740	SSF53448	Nucleotide-diphospho-sugar transferases
BER92_01745	SSF53901	Thiolase-like
BER92_01750	SSF53901	Thiolase-like
BER92_01755	SSF160191	YcgL-like
BER92_01760	SSF48403	Ankyrin repeat
BER92_01765	SSF52788	Phosphotyrosine protein phosphatases I
BER92_01770	SSF48208	Six-hairpin glycosidases
BER92_01775	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_01775	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
BER92_01780	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_01785	SSF51069	Carbonic anhydrase
BER92_01790	SSF158791	MgtE N-terminal domain-like
BER92_01790	SSF161093	MgtE membrane domain-like
BER92_01790	SSF54631	CBS-domain pair
BER92_01795	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_01795	SSF52210	Succinyl-CoA synthetase domains
BER92_01795	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BER92_01795	SSF56059	Glutathione synthetase ATP-binding domain-like
BER92_01805	SSF48168	R1 subunit of ribonucleotide reductase, N-terminal domain
BER92_01805	SSF51998	PFL-like glycyl radical enzymes
BER92_01810	SSF47240	Ferritin-like
BER92_01815	SSF52218	Flavoproteins
BER92_01820	SSF52833	Thioredoxin-like
BER92_01835	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_01840	SSF53098	Ribonuclease H-like
BER92_01845	SSF51695	PLC-like phosphodiesterases
BER92_01850	SSF56935	Porins
BER92_01855	SSF55144	LigT-like
BER92_01870	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
BER92_01870	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
BER92_01870	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
BER92_01875	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
BER92_01875	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
BER92_01885	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
BER92_01890	SSF111369	HlyD-like secretion proteins
BER92_01895	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_01935	SSF46689	Homeodomain-like
BER92_01960	SSF51395	FMN-linked oxidoreductases
BER92_01975	SSF53383	PLP-dependent transferases
BER92_01980	SSF56655	Carbohydrate phosphatase
BER92_01985	SSF51126	Pectin lyase-like
BER92_01990	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_02010	SSF55811	Nudix
BER92_02015	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_02020	SSF55486	Metalloproteases ("zincins"), catalytic domain
BER92_02050	SSF53901	Thiolase-like
BER92_02055	SSF48452	TPR-like
BER92_02065	SSF69618	HemD-like
BER92_02070	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
BER92_02080	SSF52821	Rhodanese/Cell cycle control phosphatase
BER92_02085	SSF54611	SecB-like
BER92_02090	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
BER92_02090	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_02095	SSF56935	Porins
BER92_02100	SSF52467	DHS-like NAD/FAD-binding domain
BER92_02100	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
BER92_02110	SSF75217	alpha/beta knot
BER92_02120	SSF53901	Thiolase-like
BER92_02130	SSF46689	Homeodomain-like
BER92_02135	SSF53098	Ribonuclease H-like
BER92_02150	SSF55315	L30e-like
BER92_02150	SSF75217	alpha/beta knot
BER92_02160	SSF51569	Aldolase
BER92_02165	SSF50182	Sm-like ribonucleoproteins
BER92_02180	SSF50447	Translation proteins
BER92_02180	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_02180	SSF54980	EF-G C-terminal domain-like
BER92_02185	SSF50891	Cyclophilin-like
BER92_02190	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_02190	SSF56327	LDH C-terminal domain-like
BER92_02225	SSF51395	FMN-linked oxidoreductases
BER92_02225	SSF51905	FAD/NAD(P)-binding domain
BER92_02225	SSF51971	Nucleotide-binding domain
BER92_02230	SSF50129	GroES-like
BER92_02230	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_02235	SSF103088	OmpA-like
BER92_02235	SSF103647	TSP type-3 repeat
BER92_02235	SSF56925	OMPA-like
BER92_02245	SSF55120	Pseudouridine synthase
BER92_02245	SSF55174	Alpha-L RNA-binding motif
BER92_02255	SSF53383	PLP-dependent transferases
BER92_02260	SSF53850	Periplasmic binding protein-like II
BER92_02265	SSF161098	MetI-like
BER92_02270	SSF161098	MetI-like
BER92_02275	SSF50331	MOP-like
BER92_02275	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_02285	SSF50129	GroES-like
BER92_02285	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_02290	SSF56935	Porins
BER92_02295	SSF53649	Alkaline phosphatase-like
BER92_02300	SSF53254	Phosphoglycerate mutase-like
BER92_02315	SSF81273	H-NS histone-like proteins
BER92_02320	SSF51011	Glycosyl hydrolase domain
BER92_02320	SSF51445	(Trans)glycosidases
BER92_02320	SSF81296	E set domains
BER92_02335	SSF56059	Glutathione synthetase ATP-binding domain-like
BER92_02345	SSF52172	CheY-like
BER92_02350	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER92_02350	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER92_02370	SSF63380	Riboflavin synthase domain-like
BER92_02375	SSF142695	RibA-like
BER92_02375	SSF55821	YrdC/RibB
BER92_02380	SSF52121	Lumazine synthase
BER92_02385	SSF48013	NusB-like
BER92_02390	SSF55326	PurM N-terminal domain-like
BER92_02390	SSF56042	PurM C-terminal domain-like
BER92_02410	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BER92_02425	SSF55931	Glutamine synthetase/guanido kinase
BER92_02430	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_02435	SSF46626	Cytochrome c
BER92_02440	SSF52833	Thioredoxin-like
BER92_02445	SSF52833	Thioredoxin-like
BER92_02450	SSF56219	DNase I-like
BER92_02455	SSF50129	GroES-like
BER92_02455	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_02460	SSF48371	ARM repeat
BER92_02475	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_02485	SSF53474	alpha/beta-Hydrolases
BER92_02485	SSF82171	DPP6 N-terminal domain-like
BER92_02495	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_02520	SSF143865	CorA soluble domain-like
BER92_02520	SSF144083	Magnesium transport protein CorA, transmembrane region
BER92_02535	SSF51219	TRAP-like
BER92_02540	SSF48208	Six-hairpin glycosidases
BER92_02560	SSF63411	LuxS/MPP-like metallohydrolase
BER92_02565	SSF55073	Nucleotide cyclase
BER92_02565	SSF55781	GAF domain-like
BER92_02565	SSF55785	PYP-like sensor domain (PAS domain)
BER92_02580	SSF49384	Carbohydrate-binding domain
BER92_02580	SSF51445	(Trans)glycosidases
BER92_02585	SSF52091	SpoIIaa-like
BER92_02595	SSF53448	Nucleotide-diphospho-sugar transferases
BER92_02600	SSF53474	alpha/beta-Hydrolases
BER92_02610	SSF52172	CheY-like
BER92_02615	SSF53850	Periplasmic binding protein-like II
BER92_02615	SSF54782	Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
BER92_02625	SSF46785	"Winged helix" DNA-binding domain
BER92_02630	SSF50814	Lipocalins
BER92_02640	SSF50993	Peptidase/esterase 'gauge' domain
BER92_02640	SSF53474	alpha/beta-Hydrolases
BER92_02655	SSF53383	PLP-dependent transferases
BER92_02660	SSF50993	Peptidase/esterase 'gauge' domain
BER92_02660	SSF53474	alpha/beta-Hydrolases
BER92_02670	SSF54506	Diaminopimelate epimerase-like
BER92_02680	SSF56349	DNA breaking-rejoining enzymes
BER92_02685	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
BER92_02690	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_02700	SSF53927	Cytidine deaminase-like
BER92_02715	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_02720	SSF55073	Nucleotide cyclase
BER92_02725	SSF48371	ARM repeat
BER92_02725	SSF55486	Metalloproteases ("zincins"), catalytic domain
BER92_02725	SSF63737	Leukotriene A4 hydrolase N-terminal domain
BER92_02735	SSF56784	HAD-like
BER92_02740	SSF53613	Ribokinase-like
BER92_02745	SSF53067	Actin-like ATPase domain
BER92_02760	SSF56519	Penicillin binding protein dimerisation domain
BER92_02760	SSF56601	beta-lactamase/transpeptidase-like
BER92_02770	SSF51126	Pectin lyase-like
BER92_02775	SSF53955	Lysozyme-like
BER92_02780	SSF110997	Sporulation related repeat
BER92_02780	SSF50685	Barwin-like endoglucanases
BER92_02785	SSF56601	beta-lactamase/transpeptidase-like
BER92_02785	SSF69189	Penicillin-binding protein associated domain
BER92_02795	SSF117991	YbeD/HP0495-like
BER92_02800	SSF55681	Class II aaRS and biotin synthetases
BER92_02805	SSF102114	Radical SAM enzymes
BER92_02830	SSF50156	PDZ domain-like
BER92_02830	SSF52096	ClpP/crotonase
BER92_02840	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
BER92_02870	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
BER92_02870	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_02875	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_02875	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
BER92_02885	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER92_02885	SSF55785	PYP-like sensor domain (PAS domain)
BER92_02885	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER92_02890	SSF52172	CheY-like
BER92_02895	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER92_02895	SSF52172	CheY-like
BER92_02895	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER92_02900	SSF55083	6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
BER92_02905	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_02910	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_02930	SSF53098	Ribonuclease H-like
BER92_02935	SSF46689	Homeodomain-like
BER92_02945	SSF46689	Homeodomain-like
BER92_02950	SSF46785	"Winged helix" DNA-binding domain
BER92_02950	SSF64288	Chorismate lyase-like
BER92_02955	SSF103473	MFS general substrate transporter
BER92_02960	SSF47413	lambda repressor-like DNA-binding domains
BER92_02960	SSF53822	Periplasmic binding protein-like I
BER92_02965	SSF53697	SIS domain
BER92_02970	SSF51338	Composite domain of metallo-dependent hydrolases
BER92_02970	SSF51556	Metallo-dependent hydrolases
BER92_02985	SSF50129	GroES-like
BER92_02985	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_02995	SSF53474	alpha/beta-Hydrolases
BER92_03010	SSF49899	Concanavalin A-like lectins/glucanases
BER92_03020	SSF51338	Composite domain of metallo-dependent hydrolases
BER92_03025	SSF48452	TPR-like
BER92_03065	SSF46689	Homeodomain-like
BER92_03075	SSF52821	Rhodanese/Cell cycle control phosphatase
BER92_03075	SSF52833	Thioredoxin-like
BER92_03075	SSF89360	HesB-like domain
BER92_03080	SSF88713	Glycoside hydrolase/deacetylase
BER92_03085	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_03095	SSF53383	PLP-dependent transferases
BER92_03100	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_03100	SSF90123	ABC transporter transmembrane region
BER92_03120	SSF51120	beta-Roll
BER92_03130	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_03140	SSF51011	Glycosyl hydrolase domain
BER92_03140	SSF51445	(Trans)glycosidases
BER92_03145	SSF56935	Porins
BER92_03150	SSF103473	MFS general substrate transporter
BER92_03155	SSF47413	lambda repressor-like DNA-binding domains
BER92_03155	SSF53822	Periplasmic binding protein-like I
BER92_03160	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_03170	SSF56935	Porins
BER92_03175	SSF52172	CheY-like
BER92_03180	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER92_03180	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER92_03185	SSF53850	Periplasmic binding protein-like II
BER92_03190	SSF46894	C-terminal effector domain of the bipartite response regulators
BER92_03190	SSF52172	CheY-like
BER92_03195	SSF54001	Cysteine proteinases
BER92_03200	SSF46689	Homeodomain-like
BER92_03215	SSF46689	Homeodomain-like
BER92_03225	SSF103190	Sensory domain-like
BER92_03225	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER92_03225	SSF52172	CheY-like
BER92_03225	SSF55785	PYP-like sensor domain (PAS domain)
BER92_03225	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER92_03230	SSF56935	Porins
BER92_03235	SSF118215	Proton glutamate symport protein
BER92_03240	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_03240	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
BER92_03240	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
BER92_03255	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BER92_03270	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BER92_03275	SSF56954	Outer membrane efflux proteins (OEP)
BER92_03280	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_03285	SSF46689	Homeodomain-like
BER92_03285	SSF48498	Tetracyclin repressor-like, C-terminal domain
BER92_03290	SSF46785	"Winged helix" DNA-binding domain
BER92_03295	SSF53732	Aconitase iron-sulfur domain
BER92_03300	SSF52016	LeuD/IlvD-like
BER92_03305	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
BER92_03310	SSF56935	Porins
BER92_03320	SSF110921	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
BER92_03320	SSF51569	Aldolase
BER92_03325	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
BER92_03335	SSF52467	DHS-like NAD/FAD-binding domain
BER92_03335	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
BER92_03340	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
BER92_03340	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_03365	SSF46894	C-terminal effector domain of the bipartite response regulators
BER92_03375	SSF46689	Homeodomain-like
BER92_03380	SSF56935	Porins
BER92_03385	SSF109604	HD-domain/PDEase-like
BER92_03385	SSF52172	CheY-like
BER92_03390	SSF50324	Inorganic pyrophosphatase
BER92_03420	SSF53784	Phosphofructokinase
BER92_03425	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_03430	SSF51984	MurCD N-terminal domain
BER92_03430	SSF53244	MurD-like peptide ligases, peptide-binding domain
BER92_03430	SSF53623	MurD-like peptide ligases, catalytic domain
BER92_03435	SSF88697	PUA domain-like
BER92_03445	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
BER92_03450	SSF56112	Protein kinase-like (PK-like)
BER92_03455	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_03475	SSF53383	PLP-dependent transferases
BER92_03480	SSF53383	PLP-dependent transferases
BER92_03485	SSF51391	Thiamin phosphate synthase
BER92_03490	SSF57802	Rubredoxin-like
BER92_03495	SSF48452	TPR-like
BER92_03505	SSF100950	NagB/RpiA/CoA transferase-like
BER92_03505	SSF75445	D-ribose-5-phosphate isomerase (RpiA), lid domain
BER92_03510	SSF88697	PUA domain-like
BER92_03515	SSF100950	NagB/RpiA/CoA transferase-like
BER92_03525	SSF102829	Cell division protein ZapA-like
BER92_03535	SSF101327	YgfB-like
BER92_03540	SSF53092	Creatinase/prolidase N-terminal domain
BER92_03540	SSF55920	Creatinase/aminopeptidase
BER92_03545	SSF55920	Creatinase/aminopeptidase
BER92_03560	SSF102114	Radical SAM enzymes
BER92_03565	SSF52972	ITPase-like
BER92_03570	SSF54211	Ribosomal protein S5 domain 2-like
BER92_03570	SSF55666	Ribonuclease PH domain 2-like
BER92_03580	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_03585	SSF63562	RPB6/omega subunit-like
BER92_03590	SSF109604	HD-domain/PDEase-like
BER92_03590	SSF55021	ACT-like
BER92_03590	SSF81271	TGS-like
BER92_03590	SSF81301	Nucleotidyltransferase
BER92_03595	SSF55298	YjgF-like
BER92_03600	SSF50249	Nucleic acid-binding proteins
BER92_03600	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_03610	SSF53590	Nucleoside hydrolase
BER92_03615	SSF143800	L28p-like
BER92_03620	SSF48256	Citrate synthase
BER92_03630	SSF53955	Lysozyme-like
BER92_03630	SSF56601	beta-lactamase/transpeptidase-like
BER92_03635	SSF53067	Actin-like ATPase domain
BER92_03695	SSF52980	Restriction endonuclease-like
BER92_03700	SSF53822	Periplasmic binding protein-like I
BER92_03705	SSF53790	Tetrapyrrole methylase
BER92_03720	SSF50118	Cell growth inhibitor/plasmid maintenance toxic component
BER92_03735	SSF89447	AbrB/MazE/MraZ-like
BER92_03740	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_03740	SSF81799	Putative methyltransferase TM0872, insert domain
BER92_03750	SSF56519	Penicillin binding protein dimerisation domain
BER92_03750	SSF56601	beta-lactamase/transpeptidase-like
BER92_03755	SSF53244	MurD-like peptide ligases, peptide-binding domain
BER92_03755	SSF53623	MurD-like peptide ligases, catalytic domain
BER92_03755	SSF63418	MurE/MurF N-terminal domain
BER92_03760	SSF53244	MurD-like peptide ligases, peptide-binding domain
BER92_03760	SSF53623	MurD-like peptide ligases, catalytic domain
BER92_03760	SSF63418	MurE/MurF N-terminal domain
BER92_03775	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BER92_03780	SSF51984	MurCD N-terminal domain
BER92_03780	SSF53244	MurD-like peptide ligases, peptide-binding domain
BER92_03780	SSF53623	MurD-like peptide ligases, catalytic domain
BER92_03785	SSF52440	PreATP-grasp domain
BER92_03785	SSF56059	Glutathione synthetase ATP-binding domain-like
BER92_03795	SSF53067	Actin-like ATPase domain
BER92_03800	SSF52490	Tubulin nucleotide-binding domain-like
BER92_03800	SSF55307	Tubulin C-terminal domain-like
BER92_03805	SSF54211	Ribosomal protein S5 domain 2-like
BER92_03815	SSF51261	Duplicated hybrid motif
BER92_03820	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_03820	SSF81767	Pre-protein crosslinking domain of SecA
BER92_03820	SSF81886	Helical scaffold and wing domains of SecA
BER92_03830	SSF51391	Thiamin phosphate synthase
BER92_03830	SSF55811	Nudix
BER92_03840	SSF51730	FAD-linked oxidoreductase
BER92_03850	SSF50129	GroES-like
BER92_03850	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_03860	SSF54001	Cysteine proteinases
BER92_03875	SSF46689	Homeodomain-like
BER92_03885	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_03900	SSF54523	Pili subunits
BER92_03905	SSF160246	EspE N-terminal domain-like
BER92_03905	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_03920	SSF140931	Fic-like
BER92_03925	SSF46689	Homeodomain-like
BER92_03925	SSF52172	CheY-like
BER92_03925	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_03930	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER92_03930	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER92_03935	SSF52210	Succinyl-CoA synthetase domains
BER92_03935	SSF56059	Glutathione synthetase ATP-binding domain-like
BER92_03940	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_03940	SSF52210	Succinyl-CoA synthetase domains
BER92_03945	SSF52402	Adenine nucleotide alpha hydrolases-like
BER92_03945	SSF56317	Carbon-nitrogen hydrolase
BER92_03950	SSF48452	TPR-like
BER92_03955	SSF55120	Pseudouridine synthase
BER92_03955	SSF55174	Alpha-L RNA-binding motif
BER92_03960	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
BER92_03985	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BER92_03990	SSF48208	Six-hairpin glycosidases
BER92_03995	SSF56784	HAD-like
BER92_04000	SSF56935	Porins
BER92_04025	SSF47616	GST C-terminal domain-like
BER92_04025	SSF52833	Thioredoxin-like
BER92_04030	SSF82771	GIY-YIG endonuclease
BER92_04040	SSF46689	Homeodomain-like
BER92_04055	SSF52402	Adenine nucleotide alpha hydrolases-like
BER92_04070	SSF55120	Pseudouridine synthase
BER92_04070	SSF55174	Alpha-L RNA-binding motif
BER92_04075	SSF52172	CheY-like
BER92_04085	SSF47819	HRDC-like
BER92_04085	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_04090	SSF47240	Ferritin-like
BER92_04095	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_04100	SSF102114	Radical SAM enzymes
BER92_04110	SSF48613	Heme oxygenase-like
BER92_04115	SSF56281	Metallo-hydrolase/oxidoreductase
BER92_04120	SSF109604	HD-domain/PDEase-like
BER92_04120	SSF55021	ACT-like
BER92_04120	SSF81271	TGS-like
BER92_04120	SSF81301	Nucleotidyltransferase
BER92_04125	SSF48452	TPR-like
BER92_04130	SSF53448	Nucleotide-diphospho-sugar transferases
BER92_04130	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BER92_04135	SSF53955	Lysozyme-like
BER92_04135	SSF56601	beta-lactamase/transpeptidase-like
BER92_04140	SSF48452	TPR-like
BER92_04145	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_04150	SSF53067	Actin-like ATPase domain
BER92_04155	SSF74653	TolA/TonB C-terminal domain
BER92_04160	SSF52440	PreATP-grasp domain
BER92_04160	SSF56059	Glutathione synthetase ATP-binding domain-like
BER92_04165	SSF52172	CheY-like
BER92_04170	SSF52172	CheY-like
BER92_04175	SSF50341	CheW-like
BER92_04180	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
BER92_04185	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
BER92_04185	SSF50341	CheW-like
BER92_04185	SSF52172	CheY-like
BER92_04185	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER92_04190	SSF52738	Methylesterase CheB, C-terminal domain
BER92_04200	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BER92_04215	SSF110395	CutC-like
BER92_04220	SSF52058	L domain-like
BER92_04235	SSF49785	Galactose-binding domain-like
BER92_04235	SSF51445	(Trans)glycosidases
BER92_04240	SSF53098	Ribonuclease H-like
BER92_04245	SSF69255	gp5 N-terminal domain-like
BER92_04245	SSF69279	Phage tail proteins
BER92_04245	SSF69349	Phage fibre proteins
BER92_04275	SSF160631	SMI1/KNR4-like
BER92_04280	SSF46689	Homeodomain-like
BER92_04285	SSF53098	Ribonuclease H-like
BER92_04290	SSF46589	tRNA-binding arm
BER92_04290	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
BER92_04290	SSF50677	ValRS/IleRS/LeuRS editing domain
BER92_04290	SSF52374	Nucleotidylyl transferase
BER92_04295	SSF102400	DNA polymerase III chi subunit
BER92_04300	SSF52949	Macro domain-like
BER92_04300	SSF53187	Zn-dependent exopeptidases
BER92_04325	SSF47823	lambda integrase-like, N-terminal domain
BER92_04325	SSF56349	DNA breaking-rejoining enzymes
BER92_04330	SSF52833	Thioredoxin-like
BER92_04330	SSF54423	DsbC/DsbG N-terminal domain-like
BER92_04335	SSF109736	FGAM synthase PurL, linker domain
BER92_04335	SSF52317	Class I glutamine amidotransferase-like
BER92_04335	SSF55326	PurM N-terminal domain-like
BER92_04335	SSF56042	PurM C-terminal domain-like
BER92_04335	SSF82697	PurS-like
BER92_04345	SSF101967	Adhesin YadA, collagen-binding domain
BER92_04345	SSF54523	Pili subunits
BER92_04350	SSF52743	Subtilisin-like
BER92_04355	SSF160246	EspE N-terminal domain-like
BER92_04355	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_04365	SSF54523	Pili subunits
BER92_04370	SSF54523	Pili subunits
BER92_04385	SSF158544	GspK insert domain-like
BER92_04390	SSF53067	Actin-like ATPase domain
BER92_04410	SSF53448	Nucleotide-diphospho-sugar transferases
BER92_04415	SSF46785	"Winged helix" DNA-binding domain
BER92_04415	SSF64288	Chorismate lyase-like
BER92_04425	SSF56935	Porins
BER92_04430	SSF56112	Protein kinase-like (PK-like)
BER92_04435	SSF53448	Nucleotide-diphospho-sugar transferases
BER92_04450	SSF52025	PA domain
BER92_04465	SSF56420	Peptide deformylase
BER92_04470	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_04480	SSF53383	PLP-dependent transferases
BER92_04490	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BER92_04495	SSF53597	Dihydrofolate reductase-like
BER92_04495	SSF53927	Cytidine deaminase-like
BER92_04515	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_04535	SSF56925	OMPA-like
BER92_04540	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_04550	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_04550	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
BER92_04560	SSF51621	Phosphoenolpyruvate/pyruvate domain
BER92_04565	SSF46689	Homeodomain-like
BER92_04565	SSF48498	Tetracyclin repressor-like, C-terminal domain
BER92_04580	SSF55973	S-adenosylmethionine synthetase
BER92_04590	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_04595	SSF51395	FMN-linked oxidoreductases
BER92_04605	SSF140478	LemA-like
BER92_04620	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER92_04620	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER92_04625	SSF46894	C-terminal effector domain of the bipartite response regulators
BER92_04625	SSF52172	CheY-like
BER92_04630	SSF52266	SGNH hydrolase
BER92_04635	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_04680	SSF51430	NAD(P)-linked oxidoreductase
BER92_04690	SSF53613	Ribokinase-like
BER92_04710	SSF55831	Thymidylate synthase/dCMP hydroxymethylase
BER92_04720	SSF53597	Dihydrofolate reductase-like
BER92_04725	SSF56300	Metallo-dependent phosphatases
BER92_04730	SSF110069	ApaG-like
BER92_04735	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_04740	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
BER92_04745	SSF109998	Triger factor/SurA peptide-binding domain-like
BER92_04745	SSF54534	FKBP-like
BER92_04755	SSF52768	Arginase/deacetylase
BER92_04760	SSF89028	Cobalamin adenosyltransferase-like
BER92_04770	SSF51905	FAD/NAD(P)-binding domain
BER92_04775	SSF51905	FAD/NAD(P)-binding domain
BER92_04790	SSF46785	"Winged helix" DNA-binding domain
BER92_04790	SSF53850	Periplasmic binding protein-like II
BER92_04810	SSF63829	Calcium-dependent phosphotriesterase
BER92_04815	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_04815	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
BER92_04820	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_04825	SSF53927	Cytidine deaminase-like
BER92_04835	SSF50715	Ribosomal protein L25-like
BER92_04835	SSF52374	Nucleotidylyl transferase
BER92_04840	SSF47616	GST C-terminal domain-like
BER92_04840	SSF52833	Thioredoxin-like
BER92_04850	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER92_04855	SSF46894	C-terminal effector domain of the bipartite response regulators
BER92_04855	SSF55781	GAF domain-like
BER92_04860	SSF55068	Peptide methionine sulfoxide reductase
BER92_04865	SSF51569	Aldolase
BER92_04870	SSF54534	FKBP-like
BER92_04875	SSF46785	"Winged helix" DNA-binding domain
BER92_04875	SSF53850	Periplasmic binding protein-like II
BER92_04880	SSF51905	FAD/NAD(P)-binding domain
BER92_04880	SSF52833	Thioredoxin-like
BER92_04885	SSF52833	Thioredoxin-like
BER92_04890	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_04895	SSF53474	alpha/beta-Hydrolases
BER92_04905	SSF53187	Zn-dependent exopeptidases
BER92_04910	SSF55811	Nudix
BER92_04915	SSF47807	5' to 3' exonuclease, C-terminal subdomain
BER92_04915	SSF88723	PIN domain-like
BER92_04920	SSF55469	FMN-dependent nitroreductase-like
BER92_04940	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
BER92_04940	SSF88946	Sigma2 domain of RNA polymerase sigma factors
BER92_04950	SSF117916	Fe-S cluster assembly (FSCA) domain-like
BER92_04955	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
BER92_04970	SSF52743	Subtilisin-like
BER92_04975	SSF55826	YbaK/ProRS associated domain
BER92_04980	SSF53774	Glutaminase/Asparaginase
BER92_04990	SSF52218	Flavoproteins
BER92_05000	SSF52833	Thioredoxin-like
BER92_05010	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_05015	SSF53218	Molybdenum cofactor biosynthesis proteins
BER92_05020	SSF48452	TPR-like
BER92_05020	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BER92_05025	SSF75620	Release factor
BER92_05030	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_05030	SSF69075	Glutamyl tRNA-reductase dimerization domain
BER92_05030	SSF69742	Glutamyl tRNA-reductase catalytic, N-terminal domain
BER92_05035	SSF48452	TPR-like
BER92_05040	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
BER92_05045	SSF54211	Ribosomal protein S5 domain 2-like
BER92_05045	SSF55060	GHMP Kinase, C-terminal domain
BER92_05055	SSF53271	PRTase-like
BER92_05060	SSF50715	Ribosomal protein L25-like
BER92_05065	SSF53178	Peptidyl-tRNA hydrolase-like
BER92_05070	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_05070	SSF81271	TGS-like
BER92_05090	SSF50447	Translation proteins
BER92_05090	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
BER92_05090	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_05105	SSF50104	Translation proteins SH3-like domain
BER92_05105	SSF82679	N-utilization substance G protein NusG, N-terminal domain
BER92_05110	SSF46906	Ribosomal protein L11, C-terminal domain
BER92_05110	SSF54747	Ribosomal L11/L12e N-terminal domain
BER92_05115	SSF56808	Ribosomal protein L1
BER92_05120	SSF160369	Ribosomal protein L10-like
BER92_05125	SSF48300	Ribosomal protein L7/12, oligomerisation (N-terminal) domain
BER92_05125	SSF54736	ClpS-like
BER92_05130	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
BER92_05135	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
BER92_05140	SSF50249	Nucleic acid-binding proteins
BER92_05145	SSF47973	Ribosomal protein S7
BER92_05150	SSF50447	Translation proteins
BER92_05150	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_05150	SSF54211	Ribosomal protein S5 domain 2-like
BER92_05150	SSF54980	EF-G C-terminal domain-like
BER92_05155	SSF50447	Translation proteins
BER92_05155	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
BER92_05155	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_05160	SSF54999	Ribosomal protein S10
BER92_05165	SSF50447	Translation proteins
BER92_05170	SSF52166	Ribosomal protein L4
BER92_05175	SSF54189	Ribosomal proteins S24e, L23 and L15e
BER92_05180	SSF50104	Translation proteins SH3-like domain
BER92_05180	SSF50249	Nucleic acid-binding proteins
BER92_05185	SSF54570	Ribosomal protein S19
BER92_05190	SSF54843	Ribosomal protein L22
BER92_05195	SSF54814	Prokaryotic type KH domain (KH-domain type II)
BER92_05195	SSF54821	Ribosomal protein S3 C-terminal domain
BER92_05200	SSF54686	Ribosomal protein L16p/L10e
BER92_05205	SSF46561	Ribosomal protein L29 (L29p)
BER92_05210	SSF50249	Nucleic acid-binding proteins
BER92_05215	SSF50193	Ribosomal protein L14
BER92_05220	SSF50104	Translation proteins SH3-like domain
BER92_05225	SSF55282	RL5-like
BER92_05230	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
BER92_05235	SSF56047	Ribosomal protein S8
BER92_05240	SSF56053	Ribosomal protein L6
BER92_05245	SSF53137	Translational machinery components
BER92_05250	SSF54211	Ribosomal protein S5 domain 2-like
BER92_05250	SSF54768	dsRNA-binding domain-like
BER92_05255	SSF55129	Ribosomal protein L30p/L7e
BER92_05260	SSF52080	Ribosomal proteins L15p and L18e
BER92_05265	SSF103491	Preprotein translocase SecY subunit
BER92_05270	SSF46946	S13-like H2TH domain
BER92_05275	SSF53137	Translational machinery components
BER92_05280	SSF55174	Alpha-L RNA-binding motif
BER92_05285	SSF47789	C-terminal domain of RNA polymerase alpha subunit
BER92_05285	SSF55257	RBP11-like subunits of RNA polymerase
BER92_05285	SSF56553	Insert subdomain of RNA polymerase alpha subunit
BER92_05290	SSF64263	Prokaryotic ribosomal protein L17
BER92_05295	SSF158442	DsbB-like
BER92_05315	SSF53474	alpha/beta-Hydrolases
BER92_05325	SSF53474	alpha/beta-Hydrolases
BER92_05340	SSF81330	Gated mechanosensitive channel
BER92_05345	SSF56529	FAH
BER92_05355	SSF116726	TrkA C-terminal domain-like
BER92_05360	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_05365	SSF110399	ThiG-like
BER92_05370	SSF54285	MoaD/ThiS
BER92_05375	SSF103515	Autotransporter
BER92_05375	SSF52266	SGNH hydrolase
BER92_05385	SSF56349	DNA breaking-rejoining enzymes
BER92_05410	SSF47413	lambda repressor-like DNA-binding domains
BER92_05430	SSF53098	Ribonuclease H-like
BER92_05435	SSF46689	Homeodomain-like
BER92_05445	SSF55073	Nucleotide cyclase
BER92_05445	SSF55785	PYP-like sensor domain (PAS domain)
BER92_05510	SSF47413	lambda repressor-like DNA-binding domains
BER92_05515	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_05530	SSF47090	PGBD-like
BER92_05540	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_05540	SSF90123	ABC transporter transmembrane region
BER92_05575	SSF103473	MFS general substrate transporter
BER92_05580	SSF46689	Homeodomain-like
BER92_05600	SSF53590	Nucleoside hydrolase
BER92_05610	SSF46689	Homeodomain-like
BER92_05615	SSF53254	Phosphoglycerate mutase-like
BER92_05620	SSF53613	Ribokinase-like
BER92_05640	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_05650	SSF51206	cAMP-binding domain-like
BER92_05650	SSF51905	FAD/NAD(P)-binding domain
BER92_05655	SSF141868	EAL domain-like
BER92_05660	SSF109604	HD-domain/PDEase-like
BER92_05670	SSF75217	alpha/beta knot
BER92_05670	SSF88697	PUA domain-like
BER92_05675	SSF53383	PLP-dependent transferases
BER92_05680	SSF55811	Nudix
BER92_05685	SSF56655	Carbohydrate phosphatase
BER92_05690	SSF101386	all-alpha NTP pyrophosphatases
BER92_05695	SSF101790	Aminomethyltransferase beta-barrel domain
BER92_05695	SSF103025	Folate-binding domain
BER92_05700	SSF51230	Single hybrid motif
BER92_05710	SSF56601	beta-lactamase/transpeptidase-like
BER92_05725	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
BER92_05725	SSF56645	Acyl-CoA dehydrogenase NM domain-like
BER92_05730	SSF53474	alpha/beta-Hydrolases
BER92_05735	SSF46689	Homeodomain-like
BER92_05735	SSF48498	Tetracyclin repressor-like, C-terminal domain
BER92_05755	SSF56784	HAD-like
BER92_05770	SSF46689	Homeodomain-like
BER92_05780	SSF118352	HSP33 redox switch-like
BER92_05780	SSF64397	Hsp33 domain
BER92_05785	SSF53955	Lysozyme-like
BER92_05790	SSF53448	Nucleotide-diphospho-sugar transferases
BER92_05795	SSF54631	CBS-domain pair
BER92_05810	SSF50447	Translation proteins
BER92_05810	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_05810	SSF54980	EF-G C-terminal domain-like
BER92_05825	SSF53474	alpha/beta-Hydrolases
BER92_05830	SSF53383	PLP-dependent transferases
BER92_05835	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_05835	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
BER92_05840	SSF53474	alpha/beta-Hydrolases
BER92_05850	SSF53383	PLP-dependent transferases
BER92_05860	SSF52833	Thioredoxin-like
BER92_05865	SSF101874	YceI-like
BER92_05870	SSF81342	Transmembrane di-heme cytochromes
BER92_05875	SSF101874	YceI-like
BER92_05880	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER92_05880	SSF52172	CheY-like
BER92_05880	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER92_05880	SSF63829	Calcium-dependent phosphotriesterase
BER92_05895	SSF74650	Galactose mutarotase-like
BER92_05905	SSF47446	Signal peptide-binding domain
BER92_05905	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_05915	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
BER92_05920	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
BER92_05925	SSF54565	Ribosomal protein S16
BER92_05930	SSF50346	PRC-barrel domain
BER92_05930	SSF50447	Translation proteins
BER92_05935	SSF75217	alpha/beta knot
BER92_05940	SSF50104	Translation proteins SH3-like domain
BER92_05950	SSF55174	Alpha-L RNA-binding motif
BER92_05980	SSF55073	Nucleotide cyclase
BER92_05995	SSF52954	Class II aaRS ABD-related
BER92_05995	SSF55186	ThrRS/AlaRS common domain
BER92_05995	SSF55681	Class II aaRS and biotin synthetases
BER92_05995	SSF81271	TGS-like
BER92_06000	SSF54364	Translation initiation factor IF3, N-terminal domain
BER92_06000	SSF55200	Translation initiation factor IF3, C-terminal domain
BER92_06005	SSF143034	L35p-like
BER92_06010	SSF74731	Ribosomal protein L20
BER92_06015	SSF46589	tRNA-binding arm
BER92_06015	SSF55681	Class II aaRS and biotin synthetases
BER92_06020	SSF46955	Putative DNA-binding domain
BER92_06020	SSF50249	Nucleic acid-binding proteins
BER92_06020	SSF54991	Anticodon-binding domain of PheRS
BER92_06020	SSF55681	Class II aaRS and biotin synthetases
BER92_06020	SSF56037	PheT/TilS domain
BER92_06025	SSF47729	IHF-like DNA-binding proteins
BER92_06030	SSF46955	Putative DNA-binding domain
BER92_06070	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BER92_06075	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BER92_06085	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BER92_06105	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
BER92_06105	SSF52922	TK C-terminal domain-like
BER92_06120	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
BER92_06120	SSF56645	Acyl-CoA dehydrogenase NM domain-like
BER92_06125	SSF117070	LEA14-like
BER92_06130	SSF50814	Lipocalins
BER92_06145	SSF82771	GIY-YIG endonuclease
BER92_06160	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_06180	SSF111148	YggX-like
BER92_06185	SSF48150	DNA-glycosylase
BER92_06185	SSF55811	Nudix
BER92_06190	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_06195	SSF46689	Homeodomain-like
BER92_06195	SSF55785	PYP-like sensor domain (PAS domain)
BER92_06200	SSF54506	Diaminopimelate epimerase-like
BER92_06205	SSF51905	FAD/NAD(P)-binding domain
BER92_06205	SSF54373	FAD-linked reductases, C-terminal domain
BER92_06210	SSF54292	2Fe-2S ferredoxin-like
BER92_06215	SSF51905	FAD/NAD(P)-binding domain
BER92_06220	SSF51569	Aldolase
BER92_06225	SSF53720	ALDH-like
BER92_06230	SSF53092	Creatinase/prolidase N-terminal domain
BER92_06230	SSF55920	Creatinase/aminopeptidase
BER92_06250	SSF53474	alpha/beta-Hydrolases
BER92_06250	SSF82171	DPP6 N-terminal domain-like
BER92_06280	SSF52743	Subtilisin-like
BER92_06280	SSF54897	Protease propeptides/inhibitors
BER92_06285	SSF48208	Six-hairpin glycosidases
BER92_06290	SSF56935	Porins
BER92_06295	SSF48371	ARM repeat
BER92_06310	SSF56935	Porins
BER92_06335	SSF46689	Homeodomain-like
BER92_06345	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_06355	SSF52096	ClpP/crotonase
BER92_06360	SSF160975	AF1531-like
BER92_06360	SSF50249	Nucleic acid-binding proteins
BER92_06360	SSF89550	PHP domain-like
BER92_06365	SSF53098	Ribonuclease H-like
BER92_06370	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BER92_06375	SSF51161	Trimeric LpxA-like enzymes
BER92_06380	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
BER92_06385	SSF51161	Trimeric LpxA-like enzymes
BER92_06400	SSF50156	PDZ domain-like
BER92_06405	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_06405	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
BER92_06405	SSF69055	1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
BER92_06415	SSF64005	Undecaprenyl diphosphate synthase
BER92_06420	SSF55194	Ribosome recycling factor, RRF
BER92_06425	SSF53633	Carbamate kinase-like
BER92_06435	SSF46934	UBA-like
BER92_06435	SSF54713	Elongation factor Ts (EF-Ts), dimerisation domain
BER92_06440	SSF52313	Ribosomal protein S2
BER92_06445	SSF49354	PapD-like
BER92_06465	SSF49354	PapD-like
BER92_06475	SSF55920	Creatinase/aminopeptidase
BER92_06480	SSF109604	HD-domain/PDEase-like
BER92_06480	SSF55021	ACT-like
BER92_06480	SSF81301	Nucleotidyltransferase
BER92_06480	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
BER92_06485	SSF51161	Trimeric LpxA-like enzymes
BER92_06490	SSF52833	Thioredoxin-like
BER92_06495	SSF53187	Zn-dependent exopeptidases
BER92_06495	SSF55031	Bacterial exopeptidase dimerisation domain
BER92_06500	SSF52402	Adenine nucleotide alpha hydrolases-like
BER92_06500	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
BER92_06505	SSF51126	Pectin lyase-like
BER92_06510	SSF56935	Porins
BER92_06515	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
BER92_06525	SSF47240	Ferritin-like
BER92_06535	SSF101904	GyrA/ParC C-terminal domain-like
BER92_06535	SSF56719	Type II DNA topoisomerase
BER92_06540	SSF46785	"Winged helix" DNA-binding domain
BER92_06545	SSF56954	Outer membrane efflux proteins (OEP)
BER92_06550	SSF111369	HlyD-like secretion proteins
BER92_06555	SSF103473	MFS general substrate transporter
BER92_06575	SSF103473	MFS general substrate transporter
BER92_06580	SSF144091	Rhomboid-like
BER92_06590	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BER92_06600	SSF46785	"Winged helix" DNA-binding domain
BER92_06610	SSF52833	Thioredoxin-like
BER92_06620	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
BER92_06620	SSF63380	Riboflavin synthase domain-like
BER92_06625	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_06625	SSF90123	ABC transporter transmembrane region
BER92_06630	SSF117457	FumA C-terminal domain-like
BER92_06635	SSF53056	beta-carbonic anhydrase, cab
BER92_06655	SSF50249	Nucleic acid-binding proteins
BER92_06665	SSF47175	Cytochromes
BER92_06670	SSF69572	Activating enzymes of the ubiquitin-like proteins
BER92_06675	SSF51556	Metallo-dependent hydrolases
BER92_06695	SSF47616	GST C-terminal domain-like
BER92_06695	SSF52833	Thioredoxin-like
BER92_06700	SSF52402	Adenine nucleotide alpha hydrolases-like
BER92_06700	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
BER92_06705	SSF52218	Flavoproteins
BER92_06710	SSF48024	N-terminal domain of DnaB helicase
BER92_06710	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_06715	SSF48173	Cryptochrome/photolyase FAD-binding domain
BER92_06715	SSF52425	Cryptochrome/photolyase, N-terminal domain
BER92_06720	SSF103088	OmpA-like
BER92_06730	SSF53098	Ribonuclease H-like
BER92_06735	SSF46689	Homeodomain-like
BER92_06755	SSF47413	lambda repressor-like DNA-binding domains
BER92_06760	SSF53720	ALDH-like
BER92_06765	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
BER92_06765	SSF56645	Acyl-CoA dehydrogenase NM domain-like
BER92_06770	SSF52096	ClpP/crotonase
BER92_06775	SSF52096	ClpP/crotonase
BER92_06780	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
BER92_06780	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_06785	SSF160240	Cation efflux protein cytoplasmic domain-like
BER92_06785	SSF161111	Cation efflux protein transmembrane domain-like
BER92_06790	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
BER92_06790	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_06790	SSF52096	ClpP/crotonase
BER92_06795	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
BER92_06795	SSF88946	Sigma2 domain of RNA polymerase sigma factors
BER92_06800	SSF89069	N-terminal, cytoplasmic domain of anti-sigmaE factor RseA
BER92_06805	SSF50156	PDZ domain-like
BER92_06805	SSF50494	Trypsin-like serine proteases
BER92_06825	SSF46689	Homeodomain-like
BER92_06830	SSF53098	Ribonuclease H-like
BER92_06840	SSF143865	CorA soluble domain-like
BER92_06840	SSF144083	Magnesium transport protein CorA, transmembrane region
BER92_06850	SSF54631	CBS-domain pair
BER92_06850	SSF56176	FAD-binding/transporter-associated domain-like
BER92_06860	SSF55486	Metalloproteases ("zincins"), catalytic domain
BER92_06865	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_06870	SSF102114	Radical SAM enzymes
BER92_06875	SSF53955	Lysozyme-like
BER92_06880	SSF50022	ISP domain
BER92_06885	SSF81342	Transmembrane di-heme cytochromes
BER92_06885	SSF81648	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
BER92_06890	SSF46626	Cytochrome c
BER92_06895	SSF47616	GST C-terminal domain-like
BER92_06895	SSF52833	Thioredoxin-like
BER92_06900	SSF101738	SspB-like
BER92_06910	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_06915	SSF50486	FMT C-terminal domain-like
BER92_06925	SSF81273	H-NS histone-like proteins
BER92_06940	SSF47819	HRDC-like
BER92_06940	SSF53098	Ribonuclease H-like
BER92_06945	SSF56436	C-type lectin-like
BER92_06960	SSF50447	Translation proteins
BER92_06960	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_06960	SSF54980	EF-G C-terminal domain-like
BER92_06965	SSF51306	LexA/Signal peptidase
BER92_06975	SSF54768	dsRNA-binding domain-like
BER92_06975	SSF69065	RNase III domain-like
BER92_06980	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_06980	SSF54814	Prokaryotic type KH domain (KH-domain type II)
BER92_06985	SSF50249	Nucleic acid-binding proteins
BER92_06985	SSF57863	ArfGap/RecO-like zinc finger
BER92_06990	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
BER92_06990	SSF52172	CheY-like
BER92_06995	SSF50249	Nucleic acid-binding proteins
BER92_06995	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_07000	SSF55154	CYTH-like phosphatases
BER92_07005	SSF51905	FAD/NAD(P)-binding domain
BER92_07010	SSF48173	Cryptochrome/photolyase FAD-binding domain
BER92_07015	SSF51445	(Trans)glycosidases
BER92_07020	SSF53271	PRTase-like
BER92_07025	SSF53167	Purine and uridine phosphorylases
BER92_07030	SSF50249	Nucleic acid-binding proteins
BER92_07035	SSF56300	Metallo-dependent phosphatases
BER92_07040	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_07045	SSF117018	ATP-dependent DNA ligase DNA-binding domain
BER92_07045	SSF50249	Nucleic acid-binding proteins
BER92_07045	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
BER92_07055	SSF56281	Metallo-hydrolase/oxidoreductase
BER92_07085	SSF53901	Thiolase-like
BER92_07095	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_07095	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
BER92_07100	SSF81901	HCP-like
BER92_07125	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_07130	SSF53955	Lysozyme-like
BER92_07130	SSF54106	LysM domain
BER92_07140	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
BER92_07145	SSF55120	Pseudouridine synthase
BER92_07150	SSF51366	Ribulose-phoshate binding barrel
BER92_07170	SSF46785	"Winged helix" DNA-binding domain
BER92_07170	SSF53850	Periplasmic binding protein-like II
BER92_07175	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
BER92_07180	SSF51366	Ribulose-phoshate binding barrel
BER92_07185	SSF52096	ClpP/crotonase
BER92_07190	SSF53738	Phosphoglucomutase, first 3 domains
BER92_07190	SSF55957	Phosphoglucomutase, C-terminal domain
BER92_07195	SSF51197	Clavaminate synthase-like
BER92_07200	SSF49464	Carboxypeptidase regulatory domain-like
BER92_07200	SSF49503	Cupredoxins
BER92_07205	SSF141868	EAL domain-like
BER92_07205	SSF158472	HAMP domain-like
BER92_07205	SSF55073	Nucleotide cyclase
BER92_07215	SSF46458	Globin-like
BER92_07220	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_07225	SSF51351	Triosephosphate isomerase (TIM)
BER92_07245	SSF56770	HydA/Nqo6-like
BER92_07250	SSF143243	Nqo5-like
BER92_07255	SSF56762	HydB/Nqo4-like
BER92_07260	SSF52833	Thioredoxin-like
BER92_07265	SSF140490	Nqo1C-terminal domain-like
BER92_07265	SSF142019	Nqo1 FMN-binding domain-like
BER92_07265	SSF142984	Nqo1 middle domain-like
BER92_07270	SSF50692	ADC-like
BER92_07270	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
BER92_07270	SSF54292	2Fe-2S ferredoxin-like
BER92_07270	SSF54862	4Fe-4S ferredoxins
BER92_07280	SSF54862	4Fe-4S ferredoxins
BER92_07315	SSF74942	YhbC-like, C-terminal domain
BER92_07315	SSF75420	YhbC-like, N-terminal domain
BER92_07320	SSF47794	Rad51 N-terminal domain-like
BER92_07320	SSF50249	Nucleic acid-binding proteins
BER92_07320	SSF54814	Prokaryotic type KH domain (KH-domain type II)
BER92_07320	SSF69705	Transcription factor NusA, N-terminal domain
BER92_07325	SSF46955	Putative DNA-binding domain
BER92_07325	SSF50447	Translation proteins
BER92_07325	SSF52156	Initiation factor IF2/eIF5b, domain 3
BER92_07325	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_07330	SSF89919	Ribosome-binding factor A, RbfA
BER92_07335	SSF55120	Pseudouridine synthase
BER92_07335	SSF88697	PUA domain-like
BER92_07340	SSF47060	S15/NS1 RNA-binding domain
BER92_07345	SSF46915	Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
BER92_07345	SSF50249	Nucleic acid-binding proteins
BER92_07345	SSF54211	Ribosomal protein S5 domain 2-like
BER92_07345	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
BER92_07345	SSF55666	Ribonuclease PH domain 2-like
BER92_07365	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
BER92_07365	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
BER92_07370	SSF158997	Trm112p-like
BER92_07375	SSF52255	N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
BER92_07380	SSF51246	Rudiment single hybrid motif
BER92_07380	SSF52440	PreATP-grasp domain
BER92_07380	SSF56059	Glutathione synthetase ATP-binding domain-like
BER92_07385	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
BER92_07385	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
BER92_07390	SSF52833	Thioredoxin-like
BER92_07395	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_07405	SSF49464	Carboxypeptidase regulatory domain-like
BER92_07405	SSF56935	Porins
BER92_07410	SSF102405	MCP/YpsA-like
BER92_07420	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER92_07425	SSF54523	Pili subunits
BER92_07430	SSF54523	Pili subunits
BER92_07435	SSF50998	Quinoprotein alcohol dehydrogenase-like
BER92_07445	SSF109604	HD-domain/PDEase-like
BER92_07445	SSF52172	CheY-like
BER92_07450	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
BER92_07450	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER92_07450	SSF52172	CheY-like
BER92_07450	SSF55785	PYP-like sensor domain (PAS domain)
BER92_07450	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER92_07460	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_07470	SSF103473	MFS general substrate transporter
BER92_07475	SSF53927	Cytidine deaminase-like
BER92_07480	SSF50692	ADC-like
BER92_07480	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
BER92_07485	SSF46785	"Winged helix" DNA-binding domain
BER92_07495	SSF46689	Homeodomain-like
BER92_07500	SSF53098	Ribonuclease H-like
BER92_07510	SSF51905	FAD/NAD(P)-binding domain
BER92_07515	SSF54368	Glutamine synthetase, N-terminal domain
BER92_07515	SSF55931	Glutamine synthetase/guanido kinase
BER92_07520	SSF54368	Glutamine synthetase, N-terminal domain
BER92_07520	SSF55931	Glutamine synthetase/guanido kinase
BER92_07525	SSF53850	Periplasmic binding protein-like II
BER92_07530	SSF111369	HlyD-like secretion proteins
BER92_07535	SSF103473	MFS general substrate transporter
BER92_07540	SSF56954	Outer membrane efflux proteins (OEP)
BER92_07545	SSF50331	MOP-like
BER92_07545	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_07550	SSF161098	MetI-like
BER92_07555	SSF161098	MetI-like
BER92_07560	SSF53720	ALDH-like
BER92_07570	SSF55785	PYP-like sensor domain (PAS domain)
BER92_07575	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
BER92_07575	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
BER92_07575	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
BER92_07580	SSF111369	HlyD-like secretion proteins
BER92_07585	SSF46689	Homeodomain-like
BER92_07585	SSF48498	Tetracyclin repressor-like, C-terminal domain
BER92_07590	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_07590	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
BER92_07630	SSF47598	Ribbon-helix-helix
BER92_07670	SSF46689	Homeodomain-like
BER92_07680	SSF53098	Ribonuclease H-like
BER92_07690	SSF46600	C-terminal UvrC-binding domain of UvrB
BER92_07690	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_07710	SSF54427	NTF2-like
BER92_07725	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_07730	SSF53955	Lysozyme-like
BER92_07745	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_07780	SSF47090	PGBD-like
BER92_07800	SSF69318	Integrin alpha N-terminal domain
BER92_07805	SSF47090	PGBD-like
BER92_07810	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_07840	SSF47090	PGBD-like
BER92_07870	SSF56349	DNA breaking-rejoining enzymes
BER92_07890	SSF47413	lambda repressor-like DNA-binding domains
BER92_07915	SSF56349	DNA breaking-rejoining enzymes
BER92_07930	SSF74982	Small protein B (SmpB)
BER92_07935	SSF55961	Bet v1-like
BER92_07940	SSF54285	MoaD/ThiS
BER92_07950	SSF46785	"Winged helix" DNA-binding domain
BER92_07955	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_07960	SSF46785	"Winged helix" DNA-binding domain
BER92_07960	SSF55781	GAF domain-like
BER92_07965	SSF51064	Head domain of nucleotide exchange factor GrpE
BER92_07965	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE
BER92_07970	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
BER92_07970	SSF53067	Actin-like ATPase domain
BER92_07975	SSF46565	Chaperone J-domain
BER92_07975	SSF49493	HSP40/DnaJ peptide-binding domain
BER92_07975	SSF57938	DnaJ/Hsp40 cysteine-rich domain
BER92_07980	SSF53613	Ribokinase-like
BER92_07985	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
BER92_07985	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_07985	SSF55021	ACT-like
BER92_07995	SSF56954	Outer membrane efflux proteins (OEP)
BER92_08000	SSF111369	HlyD-like secretion proteins
BER92_08005	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_08005	SSF90123	ABC transporter transmembrane region
BER92_08020	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_08020	SSF90123	ABC transporter transmembrane region
BER92_08025	SSF54211	Ribosomal protein S5 domain 2-like
BER92_08025	SSF54980	EF-G C-terminal domain-like
BER92_08030	SSF102405	MCP/YpsA-like
BER92_08035	SSF51905	FAD/NAD(P)-binding domain
BER92_08035	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
BER92_08040	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
BER92_08040	SSF51230	Single hybrid motif
BER92_08040	SSF52777	CoA-dependent acyltransferases
BER92_08045	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
BER92_08050	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BER92_08055	SSF51197	Clavaminate synthase-like
BER92_08060	SSF48557	L-aspartase-like
BER92_08065	SSF48557	L-aspartase-like
BER92_08075	SSF46689	Homeodomain-like
BER92_08085	SSF53098	Ribonuclease H-like
BER92_08115	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_08120	SSF46785	"Winged helix" DNA-binding domain
BER92_08130	SSF52833	Thioredoxin-like
BER92_08135	SSF54534	FKBP-like
BER92_08140	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
BER92_08140	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_08140	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
BER92_08160	SSF47413	lambda repressor-like DNA-binding domains
BER92_08160	SSF53822	Periplasmic binding protein-like I
BER92_08165	SSF103473	MFS general substrate transporter
BER92_08170	SSF53613	Ribokinase-like
BER92_08175	SSF48208	Six-hairpin glycosidases
BER92_08180	SSF47644	Methionine synthase domain
BER92_08180	SSF51717	Dihydropteroate synthetase-like
BER92_08180	SSF52242	Cobalamin (vitamin B12)-binding domain
BER92_08180	SSF56507	Methionine synthase activation domain-like
BER92_08185	SSF82282	Homocysteine S-methyltransferase
BER92_08190	SSF46785	"Winged helix" DNA-binding domain
BER92_08190	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_08195	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
BER92_08195	SSF56645	Acyl-CoA dehydrogenase NM domain-like
BER92_08200	SSF52266	SGNH hydrolase
BER92_08210	SSF50249	Nucleic acid-binding proteins
BER92_08215	SSF55315	L30e-like
BER92_08215	SSF75217	alpha/beta knot
BER92_08220	SSF63829	Calcium-dependent phosphotriesterase
BER92_08225	SSF55073	Nucleotide cyclase
BER92_08230	SSF53098	Ribonuclease H-like
BER92_08235	SSF109755	PhoU-like
BER92_08240	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_08245	SSF161098	MetI-like
BER92_08250	SSF161098	MetI-like
BER92_08255	SSF53850	Periplasmic binding protein-like II
BER92_08265	SSF53850	Periplasmic binding protein-like II
BER92_08285	SSF53056	beta-carbonic anhydrase, cab
BER92_08295	SSF48150	DNA-glycosylase
BER92_08310	SSF54534	FKBP-like
BER92_08315	SSF55811	Nudix
BER92_08320	SSF52821	Rhodanese/Cell cycle control phosphatase
BER92_08330	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
BER92_08335	SSF50800	PK beta-barrel domain-like
BER92_08340	SSF53474	alpha/beta-Hydrolases
BER92_08345	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BER92_08350	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_08355	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_08360	SSF111331	NAD kinase/diacylglycerol kinase-like
BER92_08385	SSF53098	Ribonuclease H-like
BER92_08390	SSF51905	FAD/NAD(P)-binding domain
BER92_08395	SSF53383	PLP-dependent transferases
BER92_08405	SSF51182	RmlC-like cupins
BER92_08410	SSF53056	beta-carbonic anhydrase, cab
BER92_08435	SSF50249	Nucleic acid-binding proteins
BER92_08435	SSF55681	Class II aaRS and biotin synthetases
BER92_08440	SSF89360	HesB-like domain
BER92_08445	SSF54995	Ribosomal protein S6
BER92_08450	SSF46911	Ribosomal protein S18
BER92_08455	SSF55653	Ribosomal protein L9 C-domain
BER92_08455	SSF55658	L9 N-domain-like
BER92_08460	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_08460	SSF57997	Tropomyosin
BER92_08460	SSF75553	Smc hinge domain
BER92_08465	SSF64383	Cell-division protein ZipA, C-terminal domain
BER92_08470	SSF47781	RuvA domain 2-like
BER92_08470	SSF50249	Nucleic acid-binding proteins
BER92_08470	SSF52113	BRCT domain
BER92_08470	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
BER92_08475	SSF55681	Class II aaRS and biotin synthetases
BER92_08490	SSF100950	NagB/RpiA/CoA transferase-like
BER92_08495	SSF101904	GyrA/ParC C-terminal domain-like
BER92_08495	SSF56719	Type II DNA topoisomerase
BER92_08505	SSF53098	Ribonuclease H-like
BER92_08510	SSF111326	Urocanase
BER92_08515	SSF53187	Zn-dependent exopeptidases
BER92_08520	SSF48557	L-aspartase-like
BER92_08525	SSF51338	Composite domain of metallo-dependent hydrolases
BER92_08525	SSF51556	Metallo-dependent hydrolases
BER92_08530	SSF51338	Composite domain of metallo-dependent hydrolases
BER92_08530	SSF51556	Metallo-dependent hydrolases
BER92_08535	SSF46785	"Winged helix" DNA-binding domain
BER92_08535	SSF64288	Chorismate lyase-like
BER92_08550	SSF49879	SMAD/FHA domain
BER92_08565	SSF52833	Thioredoxin-like
BER92_08570	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_08580	SSF103263	Chorismate synthase, AroC
BER92_08585	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_08585	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
BER92_08590	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_08590	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
BER92_08600	SSF158472	HAMP domain-like
BER92_08600	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
BER92_08605	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_08610	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER92_08610	SSF52172	CheY-like
BER92_08610	SSF55785	PYP-like sensor domain (PAS domain)
BER92_08610	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER92_08615	SSF46689	Homeodomain-like
BER92_08630	SSF48452	TPR-like
BER92_08640	SSF52833	Thioredoxin-like
BER92_08650	SSF52743	Subtilisin-like
BER92_08660	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
BER92_08660	SSF88946	Sigma2 domain of RNA polymerase sigma factors
BER92_08685	SSF103473	MFS general substrate transporter
BER92_08690	SSF51679	Bacterial luciferase-like
BER92_08700	SSF54631	CBS-domain pair
BER92_08700	SSF56176	FAD-binding/transporter-associated domain-like
BER92_08720	SSF53474	alpha/beta-Hydrolases
BER92_08725	SSF54211	Ribosomal protein S5 domain 2-like
BER92_08725	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER92_08725	SSF56719	Type II DNA topoisomerase
BER92_08735	SSF52317	Class I glutamine amidotransferase-like
BER92_08735	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_08740	SSF51569	Aldolase
BER92_08745	SSF51604	Enolase C-terminal domain-like
BER92_08745	SSF54826	Enolase N-terminal domain-like
BER92_08755	SSF53448	Nucleotide-diphospho-sugar transferases
BER92_08760	SSF69765	IpsF-like
BER92_08765	SSF55120	Pseudouridine synthase
BER92_08770	SSF160443	SMR domain-like
BER92_08775	SSF64167	SurE-like
BER92_08780	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_08790	SSF51261	Duplicated hybrid motif
BER92_08835	SSF53474	alpha/beta-Hydrolases
BER92_08845	SSF48452	TPR-like
BER92_08855	SSF52833	Thioredoxin-like
BER92_08865	SSF82093	Heme chaperone CcmE
BER92_08885	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_08890	SSF53383	PLP-dependent transferases
BER92_08895	SSF56317	Carbon-nitrogen hydrolase
BER92_08900	SSF50969	YVTN repeat-like/Quinoprotein amine dehydrogenase
BER92_08910	SSF55120	Pseudouridine synthase
BER92_08910	SSF55174	Alpha-L RNA-binding motif
BER92_08915	SSF46785	"Winged helix" DNA-binding domain
BER92_08925	SSF54909	Dimeric alpha+beta barrel
BER92_08930	SSF82657	BolA-like
BER92_08935	SSF47413	lambda repressor-like DNA-binding domains
BER92_08935	SSF53822	Periplasmic binding protein-like I
BER92_08940	SSF49452	Starch-binding domain-like
BER92_08940	SSF56935	Porins
BER92_08950	SSF53850	Periplasmic binding protein-like II
BER92_08955	SSF161098	MetI-like
BER92_08960	SSF161098	MetI-like
BER92_08965	SSF48208	Six-hairpin glycosidases
BER92_08965	SSF49785	Galactose-binding domain-like
BER92_08985	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BER92_08990	SSF56317	Carbon-nitrogen hydrolase
BER92_08995	SSF55909	Pentein
BER92_09005	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_09010	SSF50249	Nucleic acid-binding proteins
BER92_09015	SSF47729	IHF-like DNA-binding proteins
BER92_09025	SSF81901	HCP-like
BER92_09035	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_09035	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_09040	SSF53448	Nucleotide-diphospho-sugar transferases
BER92_09050	SSF46689	Homeodomain-like
BER92_09075	SSF158757	SMc04008-like
BER92_09080	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_09080	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
BER92_09085	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
BER92_09085	SSF54631	CBS-domain pair
BER92_09090	SSF52317	Class I glutamine amidotransferase-like
BER92_09090	SSF52402	Adenine nucleotide alpha hydrolases-like
BER92_09090	SSF54810	GMP synthetase C-terminal dimerisation domain
BER92_09095	SSF56349	DNA breaking-rejoining enzymes
BER92_09100	SSF46955	Putative DNA-binding domain
BER92_09120	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_09135	SSF47598	Ribbon-helix-helix
BER92_09140	SSF88723	PIN domain-like
BER92_09145	SSF101082	Typo IV secretion system protein TraC
BER92_09150	SSF46689	Homeodomain-like
BER92_09160	SSF53098	Ribonuclease H-like
BER92_09190	SSF52954	Class II aaRS ABD-related
BER92_09190	SSF55681	Class II aaRS and biotin synthetases
BER92_09195	SSF48295	TrpR-like
BER92_09200	SSF53850	Periplasmic binding protein-like II
BER92_09205	SSF53720	ALDH-like
BER92_09210	SSF53383	PLP-dependent transferases
BER92_09215	SSF54211	Ribosomal protein S5 domain 2-like
BER92_09215	SSF56784	HAD-like
BER92_09220	SSF52317	Class I glutamine amidotransferase-like
BER92_09225	SSF51366	Ribulose-phoshate binding barrel
BER92_09230	SSF51366	Ribulose-phoshate binding barrel
BER92_09235	SSF101386	all-alpha NTP pyrophosphatases
BER92_09235	SSF141734	HisI-like
BER92_09240	SSF56300	Metallo-dependent phosphatases
BER92_09255	SSF52129	Caspase-like
BER92_09260	SSF56784	HAD-like
BER92_09265	SSF51182	RmlC-like cupins
BER92_09270	SSF53639	AraD/HMP-PK domain-like
BER92_09285	SSF55811	Nudix
BER92_09290	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_09290	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
BER92_09290	SSF55021	ACT-like
BER92_09295	SSF55103	FAD-linked oxidases, C-terminal domain
BER92_09295	SSF56176	FAD-binding/transporter-associated domain-like
BER92_09310	SSF50104	Translation proteins SH3-like domain
BER92_09310	SSF50249	Nucleic acid-binding proteins
BER92_09315	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_09320	SSF51569	Aldolase
BER92_09325	SSF52096	ClpP/crotonase
BER92_09330	SSF50037	C-terminal domain of transcriptional repressors
BER92_09335	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_09355	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_09355	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
BER92_09360	SSF52021	Carbamoyl phosphate synthetase, small subunit N-terminal domain
BER92_09360	SSF52317	Class I glutamine amidotransferase-like
BER92_09365	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_09370	SSF88723	PIN domain-like
BER92_09375	SSF48108	Carbamoyl phosphate synthetase, large subunit connection domain
BER92_09375	SSF52335	Methylglyoxal synthase-like
BER92_09375	SSF52440	PreATP-grasp domain
BER92_09375	SSF56059	Glutathione synthetase ATP-binding domain-like
BER92_09380	SSF46557	GreA transcript cleavage protein, N-terminal domain
BER92_09380	SSF54534	FKBP-like
BER92_09390	SSF64182	DHH phosphoesterases
BER92_09395	SSF75620	Release factor
BER92_09400	SSF50249	Nucleic acid-binding proteins
BER92_09400	SSF55681	Class II aaRS and biotin synthetases
BER92_09405	SSF109604	HD-domain/PDEase-like
BER92_09405	SSF52172	CheY-like
BER92_09415	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
BER92_09415	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER92_09415	SSF52172	CheY-like
BER92_09415	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER92_09420	SSF52096	ClpP/crotonase
BER92_09425	SSF56801	Acetyl-CoA synthetase-like
BER92_09435	SSF52016	LeuD/IlvD-like
BER92_09435	SSF53732	Aconitase iron-sulfur domain
BER92_09440	SSF89447	AbrB/MazE/MraZ-like
BER92_09445	SSF88723	PIN domain-like
BER92_09450	SSF52016	LeuD/IlvD-like
BER92_09450	SSF53732	Aconitase iron-sulfur domain
BER92_09450	SSF74778	Aconitase B, N-terminal domain
BER92_09455	SSF53474	alpha/beta-Hydrolases
BER92_09460	SSF141868	EAL domain-like
BER92_09460	SSF55073	Nucleotide cyclase
BER92_09460	SSF55781	GAF domain-like
BER92_09460	SSF55785	PYP-like sensor domain (PAS domain)
BER92_09465	SSF52172	CheY-like
BER92_09465	SSF52738	Methylesterase CheB, C-terminal domain
BER92_09470	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
BER92_09475	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
BER92_09475	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_09485	SSF50341	CheW-like
BER92_09495	SSF158472	HAMP domain-like
BER92_09495	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
BER92_09505	SSF158472	HAMP domain-like
BER92_09505	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
BER92_09510	SSF158472	HAMP domain-like
BER92_09510	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
BER92_09520	SSF158472	HAMP domain-like
BER92_09520	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
BER92_09540	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
BER92_09540	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER92_09540	SSF50341	CheW-like
BER92_09540	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER92_09545	SSF52172	CheY-like
BER92_09550	SSF52091	SpoIIaa-like
BER92_09555	SSF50341	CheW-like
BER92_09560	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_09565	SSF103088	OmpA-like
BER92_09600	SSF50249	Nucleic acid-binding proteins
BER92_09620	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_09640	SSF50249	Nucleic acid-binding proteins
BER92_09680	SSF117916	Fe-S cluster assembly (FSCA) domain-like
BER92_09680	SSF89360	HesB-like domain
BER92_09685	SSF55248	PCD-like
BER92_09690	SSF74653	TolA/TonB C-terminal domain
BER92_09695	SSF46689	Homeodomain-like
BER92_09720	SSF55120	Pseudouridine synthase
BER92_09720	SSF55174	Alpha-L RNA-binding motif
BER92_09725	SSF50249	Nucleic acid-binding proteins
BER92_09735	SSF46894	C-terminal effector domain of the bipartite response regulators
BER92_09735	SSF52172	CheY-like
BER92_09740	SSF52821	Rhodanese/Cell cycle control phosphatase
BER92_09750	SSF54534	FKBP-like
BER92_09760	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
BER92_09760	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_09760	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
BER92_09780	SSF46689	Homeodomain-like
BER92_09790	SSF53098	Ribonuclease H-like
BER92_09820	SSF69255	gp5 N-terminal domain-like
BER92_09820	SSF69279	Phage tail proteins
BER92_09830	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_09830	SSF81923	Double Clp-N motif
BER92_09845	SSF160719	gpW/gp25-like
BER92_09850	SSF141452	Hcp1-like
BER92_09865	SSF48452	TPR-like
BER92_09885	SSF69255	gp5 N-terminal domain-like
BER92_09910	SSF69255	gp5 N-terminal domain-like
BER92_09910	SSF69349	Phage fibre proteins
BER92_09950	SSF69255	gp5 N-terminal domain-like
BER92_09950	SSF69349	Phage fibre proteins
BER92_09955	SSF46689	Homeodomain-like
BER92_09995	SSF47240	Ferritin-like
BER92_10020	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_10020	SSF53790	Tetrapyrrole methylase
BER92_10020	SSF75615	Siroheme synthase middle domains-like
BER92_10030	SSF53448	Nucleotide-diphospho-sugar transferases
BER92_10035	SSF53218	Molybdenum cofactor biosynthesis proteins
BER92_10035	SSF63867	MoeA C-terminal domain-like
BER92_10035	SSF63882	MoeA N-terminal region -like
BER92_10050	SSF56935	Porins
BER92_10055	SSF52821	Rhodanese/Cell cycle control phosphatase
BER92_10055	SSF69572	Activating enzymes of the ubiquitin-like proteins
BER92_10060	SSF53218	Molybdenum cofactor biosynthesis proteins
BER92_10060	SSF63867	MoeA C-terminal domain-like
BER92_10060	SSF63882	MoeA N-terminal region -like
BER92_10065	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_10070	SSF50998	Quinoprotein alcohol dehydrogenase-like
BER92_10075	SSF48452	TPR-like
BER92_10085	SSF48452	TPR-like
BER92_10090	SSF102114	Radical SAM enzymes
BER92_10095	SSF54919	Nucleoside diphosphate kinase, NDK
BER92_10100	SSF46689	Homeodomain-like
BER92_10100	SSF48498	Tetracyclin repressor-like, C-terminal domain
BER92_10105	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
BER92_10105	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_10105	SSF52096	ClpP/crotonase
BER92_10110	SSF53901	Thiolase-like
BER92_10115	SSF81340	Clc chloride channel
BER92_10125	SSF48019	post-AAA+ oligomerization domain-like
BER92_10125	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_10130	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
BER92_10135	SSF54001	Cysteine proteinases
BER92_10140	SSF46785	"Winged helix" DNA-binding domain
BER92_10140	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_10145	SSF51905	FAD/NAD(P)-binding domain
BER92_10150	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BER92_10155	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BER92_10160	SSF50249	Nucleic acid-binding proteins
BER92_10165	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_10165	SSF81923	Double Clp-N motif
BER92_10170	SSF54736	ClpS-like
BER92_10175	SSF55811	Nudix
BER92_10180	SSF52402	Adenine nucleotide alpha hydrolases-like
BER92_10185	SSF101322	YcfC-like
BER92_10190	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
BER92_10210	SSF55785	PYP-like sensor domain (PAS domain)
BER92_10210	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER92_10215	SSF141868	EAL domain-like
BER92_10215	SSF52172	CheY-like
BER92_10215	SSF55073	Nucleotide cyclase
BER92_10220	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER92_10220	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER92_10225	SSF140566	FlgN-like
BER92_10230	SSF101498	Anti-sigma factor FlgM
BER92_10240	SSF50341	CheW-like
BER92_10240	SSF52172	CheY-like
BER92_10260	SSF117143	Flagellar hook protein flgE
BER92_10265	SSF117143	Flagellar hook protein flgE
BER92_10270	SSF117143	Flagellar hook protein flgE
BER92_10290	SSF64518	Phase 1 flagellin
BER92_10295	SSF64518	Phase 1 flagellin
BER92_10300	SSF64518	Phase 1 flagellin
BER92_10310	SSF101116	Flagellar export chaperone FliS
BER92_10325	SSF46894	C-terminal effector domain of the bipartite response regulators
BER92_10325	SSF52172	CheY-like
BER92_10335	SSF52172	CheY-like
BER92_10340	SSF46689	Homeodomain-like
BER92_10340	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_10350	SSF53448	Nucleotide-diphospho-sugar transferases
BER92_10350	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BER92_10370	SSF48029	FliG
BER92_10380	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_10400	SSF101801	Surface presentation of antigens (SPOA)
BER92_10400	SSF103039	CheC-like
BER92_10405	SSF101801	Surface presentation of antigens (SPOA)
BER92_10435	SSF55073	Nucleotide cyclase
BER92_10440	SSF55073	Nucleotide cyclase
BER92_10440	SSF63829	Calcium-dependent phosphotriesterase
BER92_10445	SSF160544	EscU C-terminal domain-like
BER92_10455	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_10460	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_10465	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
BER92_10465	SSF88946	Sigma2 domain of RNA polymerase sigma factors
BER92_10470	SSF52172	CheY-like
BER92_10475	SSF75708	Chemotaxis phosphatase CheZ
BER92_10480	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
BER92_10480	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER92_10480	SSF50341	CheW-like
BER92_10480	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER92_10545	SSF103515	Autotransporter
BER92_10545	SSF52743	Subtilisin-like
BER92_10550	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
BER92_10560	SSF46689	Homeodomain-like
BER92_10585	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
BER92_10605	SSF54211	Ribosomal protein S5 domain 2-like
BER92_10605	SSF55060	GHMP Kinase, C-terminal domain
BER92_10610	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_10610	SSF53633	Carbamate kinase-like
BER92_10610	SSF55021	ACT-like
BER92_10610	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
BER92_10620	SSF46689	Homeodomain-like
BER92_10660	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_10665	SSF53098	Ribonuclease H-like
BER92_10670	SSF46689	Homeodomain-like
BER92_10675	SSF53720	ALDH-like
BER92_10685	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_10690	SSF51395	FMN-linked oxidoreductases
BER92_10695	SSF56176	FAD-binding/transporter-associated domain-like
BER92_10695	SSF56194	Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
BER92_10700	SSF103481	Multidrug resistance efflux transporter EmrE
BER92_10705	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
BER92_10715	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER92_10715	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER92_10720	SSF46689	Homeodomain-like
BER92_10720	SSF52172	CheY-like
BER92_10730	SSF141868	EAL domain-like
BER92_10730	SSF55073	Nucleotide cyclase
BER92_10730	SSF55781	GAF domain-like
BER92_10775	SSF51445	(Trans)glycosidases
BER92_10775	SSF52279	Beta-D-glucan exohydrolase, C-terminal domain
BER92_10785	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_10810	SSF47090	PGBD-like
BER92_10820	SSF53697	SIS domain
BER92_10825	SSF50692	ADC-like
BER92_10830	SSF52374	Nucleotidylyl transferase
BER92_10835	SSF51621	Phosphoenolpyruvate/pyruvate domain
BER92_10840	SSF55083	6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
BER92_10845	SSF81301	Nucleotidyltransferase
BER92_10845	SSF81891	Poly A polymerase C-terminal region-like
BER92_10860	SSF103473	MFS general substrate transporter
BER92_10865	SSF51658	Xylose isomerase-like
BER92_10870	SSF53067	Actin-like ATPase domain
BER92_10875	SSF48208	Six-hairpin glycosidases
BER92_10880	SSF51011	Glycosyl hydrolase domain
BER92_10880	SSF51445	(Trans)glycosidases
BER92_10880	SSF56988	Anthrax protective antigen
BER92_10880	SSF74650	Galactose mutarotase-like
BER92_10885	SSF51445	(Trans)glycosidases
BER92_10890	SSF49785	Galactose-binding domain-like
BER92_10890	SSF52266	SGNH hydrolase
BER92_10895	SSF56935	Porins
BER92_10925	SSF46785	"Winged helix" DNA-binding domain
BER92_10925	SSF53850	Periplasmic binding protein-like II
BER92_10930	SSF51569	Aldolase
BER92_10935	SSF51604	Enolase C-terminal domain-like
BER92_10935	SSF54826	Enolase N-terminal domain-like
BER92_10940	SSF63829	Calcium-dependent phosphotriesterase
BER92_10950	SSF54862	4Fe-4S ferredoxins
BER92_10960	SSF51569	Aldolase
BER92_10965	SSF55021	ACT-like
BER92_10970	SSF89946	Hypothetical protein VC0424
BER92_10975	SSF52833	Thioredoxin-like
BER92_10980	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_10980	SSF88723	PIN domain-like
BER92_10990	SSF53613	Ribokinase-like
BER92_11005	SSF46785	"Winged helix" DNA-binding domain
BER92_11005	SSF53850	Periplasmic binding protein-like II
BER92_11010	SSF51182	RmlC-like cupins
BER92_11030	SSF117130	CsrA-like
BER92_11035	SSF101353	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
BER92_11035	SSF50447	Translation proteins
BER92_11035	SSF55186	ThrRS/AlaRS common domain
BER92_11035	SSF55681	Class II aaRS and biotin synthetases
BER92_11045	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_11045	SSF54752	RecA protein, C-terminal domain
BER92_11050	SSF46785	"Winged helix" DNA-binding domain
BER92_11050	SSF51306	LexA/Signal peptidase
BER92_11055	SSF56112	Protein kinase-like (PK-like)
BER92_11065	SSF56935	Porins
BER92_11070	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
BER92_11080	SSF51126	Pectin lyase-like
BER92_11105	SSF46689	Homeodomain-like
BER92_11110	SSF53098	Ribonuclease H-like
BER92_11130	SSF47823	lambda integrase-like, N-terminal domain
BER92_11130	SSF56349	DNA breaking-rejoining enzymes
BER92_11150	SSF56935	Porins
BER92_11155	SSF142433	CinA-like
BER92_11165	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_11165	SSF54980	EF-G C-terminal domain-like
BER92_11170	SSF50182	Sm-like ribonucleoproteins
BER92_11175	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_11180	SSF51717	Dihydropteroate synthetase-like
BER92_11185	SSF140990	FtsH protease domain-like
BER92_11185	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_11190	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_11195	SSF75471	YhbY-like
BER92_11200	SSF64076	MTH938-like
BER92_11220	SSF46689	Homeodomain-like
BER92_11305	SSF69255	gp5 N-terminal domain-like
BER92_11305	SSF69279	Phage tail proteins
BER92_11310	SSF56436	C-type lectin-like
BER92_11320	SSF69255	gp5 N-terminal domain-like
BER92_11320	SSF69279	Phage tail proteins
BER92_11335	SSF103088	OmpA-like
BER92_11345	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_11360	SSF55166	Hedgehog/DD-peptidase
BER92_11415	SSF48452	TPR-like
BER92_11420	SSF69255	gp5 N-terminal domain-like
BER92_11420	SSF69279	Phage tail proteins
BER92_11420	SSF69349	Phage fibre proteins
BER92_11480	SSF46600	C-terminal UvrC-binding domain of UvrB
BER92_11480	SSF47781	RuvA domain 2-like
BER92_11480	SSF82771	GIY-YIG endonuclease
BER92_11485	SSF101898	NHL repeat
BER92_11485	SSF52833	Thioredoxin-like
BER92_11495	SSF53448	Nucleotide-diphospho-sugar transferases
BER92_11500	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_11505	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_11505	SSF90123	ABC transporter transmembrane region
BER92_11520	SSF56281	Metallo-hydrolase/oxidoreductase
BER92_11525	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_11530	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_11545	SSF109910	YgfY-like
BER92_11550	SSF46548	alpha-helical ferredoxin
BER92_11550	SSF54292	2Fe-2S ferredoxin-like
BER92_11560	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
BER92_11560	SSF51905	FAD/NAD(P)-binding domain
BER92_11560	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
BER92_11565	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
BER92_11570	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
BER92_11575	SSF103025	Folate-binding domain
BER92_11580	SSF50331	MOP-like
BER92_11580	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_11585	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_11585	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
BER92_11590	SSF53067	Actin-like ATPase domain
BER92_11595	SSF100950	NagB/RpiA/CoA transferase-like
BER92_11600	SSF143975	IlvD/EDD N-terminal domain-like
BER92_11600	SSF52016	LeuD/IlvD-like
BER92_11605	SSF51569	Aldolase
BER92_11615	SSF46626	Cytochrome c
BER92_11620	SSF46626	Cytochrome c
BER92_11655	SSF52172	CheY-like
BER92_11660	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER92_11660	SSF52172	CheY-like
BER92_11660	SSF55781	GAF domain-like
BER92_11660	SSF55785	PYP-like sensor domain (PAS domain)
BER92_11660	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER92_11665	SSF158832	Tex N-terminal region-like
BER92_11665	SSF47781	RuvA domain 2-like
BER92_11665	SSF50249	Nucleic acid-binding proteins
BER92_11665	SSF53098	Ribonuclease H-like
BER92_11690	SSF53474	alpha/beta-Hydrolases
BER92_11705	SSF55811	Nudix
BER92_11720	SSF51621	Phosphoenolpyruvate/pyruvate domain
BER92_11720	SSF52009	Phosphohistidine domain
BER92_11720	SSF56059	Glutathione synthetase ATP-binding domain-like
BER92_11725	SSF50182	Sm-like ribonucleoproteins
BER92_11725	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
BER92_11725	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
BER92_11730	SSF53098	Ribonuclease H-like
BER92_11735	SSF53927	Cytidine deaminase-like
BER92_11740	SSF46785	"Winged helix" DNA-binding domain
BER92_11750	SSF53474	alpha/beta-Hydrolases
BER92_11795	SSF46689	Homeodomain-like
BER92_11815	SSF53098	Ribonuclease H-like
BER92_11820	SSF46689	Homeodomain-like
BER92_11840	SSF53720	ALDH-like
BER92_11845	SSF53633	Carbamate kinase-like
BER92_11845	SSF88697	PUA domain-like
BER92_11850	SSF54909	Dimeric alpha+beta barrel
BER92_11855	SSF51182	RmlC-like cupins
BER92_11860	SSF48557	L-aspartase-like
BER92_11865	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_11865	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
BER92_11870	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BER92_11875	SSF53633	Carbamate kinase-like
BER92_11875	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BER92_11880	SSF53187	Zn-dependent exopeptidases
BER92_11880	SSF55031	Bacterial exopeptidase dimerisation domain
BER92_11885	SSF52402	Adenine nucleotide alpha hydrolases-like
BER92_11885	SSF69864	Argininosuccinate synthetase, C-terminal domain
BER92_11890	SSF53671	Aspartate/ornithine carbamoyltransferase
BER92_11900	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
BER92_11900	SSF52374	Nucleotidylyl transferase
BER92_11905	SSF82649	SufE/NifU
BER92_11910	SSF103473	MFS general substrate transporter
BER92_11915	SSF109635	DnaK suppressor protein DksA, alpha-hairpin domain
BER92_11915	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
BER92_11920	SSF51338	Composite domain of metallo-dependent hydrolases
BER92_11920	SSF51556	Metallo-dependent hydrolases
BER92_11925	SSF51261	Duplicated hybrid motif
BER92_11940	SSF50475	FMN-binding split barrel
BER92_11950	SSF50494	Trypsin-like serine proteases
BER92_11955	SSF51126	Pectin lyase-like
BER92_11960	SSF51126	Pectin lyase-like
BER92_11970	SSF56784	HAD-like
BER92_11975	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_11980	SSF51338	Composite domain of metallo-dependent hydrolases
BER92_11980	SSF51556	Metallo-dependent hydrolases
BER92_11990	SSF50104	Translation proteins SH3-like domain
BER92_11990	SSF50249	Nucleic acid-binding proteins
BER92_11995	SSF102114	Radical SAM enzymes
BER92_12000	SSF75217	alpha/beta knot
BER92_12005	SSF56655	Carbohydrate phosphatase
BER92_12010	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
BER92_12010	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
BER92_12015	SSF53933	Microbial ribonucleases
BER92_12020	SSF52038	Barstar-related
BER92_12025	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_12030	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_12035	SSF53271	PRTase-like
BER92_12045	SSF53474	alpha/beta-Hydrolases
BER92_12050	SSF47616	GST C-terminal domain-like
BER92_12050	SSF52833	Thioredoxin-like
BER92_12055	SSF50249	Nucleic acid-binding proteins
BER92_12065	SSF52980	Restriction endonuclease-like
BER92_12070	SSF160996	HI0933 insert domain-like
BER92_12070	SSF51905	FAD/NAD(P)-binding domain
BER92_12075	SSF141868	EAL domain-like
BER92_12075	SSF52172	CheY-like
BER92_12075	SSF55073	Nucleotide cyclase
BER92_12075	SSF55785	PYP-like sensor domain (PAS domain)
BER92_12085	SSF52374	Nucleotidylyl transferase
BER92_12090	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_12110	SSF118116	DNA mismatch repair protein MutL
BER92_12110	SSF54211	Ribosomal protein S5 domain 2-like
BER92_12110	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER92_12115	SSF53187	Zn-dependent exopeptidases
BER92_12120	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_12125	SSF53613	Ribokinase-like
BER92_12125	SSF64153	YjeF N-terminal domain-like
BER92_12130	SSF54862	4Fe-4S ferredoxins
BER92_12165	SSF51215	Regulatory protein AraC
BER92_12175	SSF82282	Homocysteine S-methyltransferase
BER92_12190	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
BER92_12190	SSF50249	Nucleic acid-binding proteins
BER92_12190	SSF52374	Nucleotidylyl transferase
BER92_12190	SSF57770	Methionyl-tRNA synthetase (MetRS), Zn-domain
BER92_12195	SSF56784	HAD-like
BER92_12200	SSF54862	4Fe-4S ferredoxins
BER92_12215	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
BER92_12215	SSF88946	Sigma2 domain of RNA polymerase sigma factors
BER92_12230	SSF51905	FAD/NAD(P)-binding domain
BER92_12240	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_12255	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_12260	SSF55298	YjgF-like
BER92_12270	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BER92_12275	SSF53474	alpha/beta-Hydrolases
BER92_12305	SSF103473	MFS general substrate transporter
BER92_12310	SSF51395	FMN-linked oxidoreductases
BER92_12315	SSF82057	Prokaryotic SH3-related domain
BER92_12325	SSF160240	Cation efflux protein cytoplasmic domain-like
BER92_12325	SSF161111	Cation efflux protein transmembrane domain-like
BER92_12335	SSF53067	Actin-like ATPase domain
BER92_12350	SSF46557	GreA transcript cleavage protein, N-terminal domain
BER92_12350	SSF54534	FKBP-like
BER92_12365	SSF102114	Radical SAM enzymes
BER92_12380	SSF53474	alpha/beta-Hydrolases
BER92_12385	SSF54197	HIT-like
BER92_12390	SSF51283	dUTPase-like
BER92_12395	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_12400	SSF49452	Starch-binding domain-like
BER92_12400	SSF56935	Porins
BER92_12405	SSF51905	FAD/NAD(P)-binding domain
BER92_12410	SSF55486	Metalloproteases ("zincins"), catalytic domain
BER92_12415	SSF55486	Metalloproteases ("zincins"), catalytic domain
BER92_12420	SSF144091	Rhomboid-like
BER92_12430	SSF51905	FAD/NAD(P)-binding domain
BER92_12430	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
BER92_12435	SSF51905	FAD/NAD(P)-binding domain
BER92_12435	SSF54373	FAD-linked reductases, C-terminal domain
BER92_12445	SSF54534	FKBP-like
BER92_12450	SSF54001	Cysteine proteinases
BER92_12455	SSF54001	Cysteine proteinases
BER92_12460	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
BER92_12465	SSF46689	Homeodomain-like
BER92_12470	SSF53098	Ribonuclease H-like
BER92_12505	SSF46785	"Winged helix" DNA-binding domain
BER92_12505	SSF53850	Periplasmic binding protein-like II
BER92_12510	SSF46589	tRNA-binding arm
BER92_12510	SSF55681	Class II aaRS and biotin synthetases
BER92_12515	SSF74653	TolA/TonB C-terminal domain
BER92_12520	SSF74653	TolA/TonB C-terminal domain
BER92_12525	SSF55205	EPT/RTPC-like
BER92_12530	SSF48600	Chorismate mutase II
BER92_12530	SSF53850	Periplasmic binding protein-like II
BER92_12530	SSF55021	ACT-like
BER92_12535	SSF53383	PLP-dependent transferases
BER92_12540	SSF56524	Oxidoreductase molybdopterin-binding domain
BER92_12545	SSF47413	lambda repressor-like DNA-binding domains
BER92_12545	SSF53822	Periplasmic binding protein-like I
BER92_12550	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
BER92_12550	SSF51621	Phosphoenolpyruvate/pyruvate domain
BER92_12550	SSF52009	Phosphohistidine domain
BER92_12550	SSF55594	HPr-like
BER92_12550	SSF55804	Phoshotransferase/anion transport protein
BER92_12555	SSF53613	Ribokinase-like
BER92_12560	SSF52794	PTS system IIB component-like
BER92_12570	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
BER92_12575	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
BER92_12585	SSF51713	tRNA-guanine transglycosylase
BER92_12590	SSF111337	QueA-like
BER92_12595	SSF46785	"Winged helix" DNA-binding domain
BER92_12595	SSF54909	Dimeric alpha+beta barrel
BER92_12600	SSF53383	PLP-dependent transferases
BER92_12605	SSF53448	Nucleotide-diphospho-sugar transferases
BER92_12615	SSF53271	PRTase-like
BER92_12630	SSF48208	Six-hairpin glycosidases
BER92_12630	SSF81296	E set domains
BER92_12635	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
BER92_12640	SSF54862	4Fe-4S ferredoxins
BER92_12650	SSF52374	Nucleotidylyl transferase
BER92_12655	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_12660	SSF110942	HSP90 C-terminal domain
BER92_12660	SSF54211	Ribosomal protein S5 domain 2-like
BER92_12660	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER92_12670	SSF53474	alpha/beta-Hydrolases
BER92_12690	SSF53098	Ribonuclease H-like
BER92_12700	SSF118215	Proton glutamate symport protein
BER92_12705	SSF53649	Alkaline phosphatase-like
BER92_12710	SSF52402	Adenine nucleotide alpha hydrolases-like
BER92_12710	SSF56037	PheT/TilS domain
BER92_12710	SSF82829	MesJ substrate recognition domain-like
BER92_12715	SSF116842	XseB-like
BER92_12720	SSF48576	Terpenoid synthases
BER92_12735	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
BER92_12740	SSF158710	PSPTO4464-like
BER92_12745	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
BER92_12760	SSF50249	Nucleic acid-binding proteins
BER92_12765	SSF52972	ITPase-like
BER92_12775	SSF75217	alpha/beta knot
BER92_12780	SSF46689	Homeodomain-like
BER92_12795	SSF46565	Chaperone J-domain
BER92_12800	SSF81301	Nucleotidyltransferase
BER92_12805	SSF52374	Nucleotidylyl transferase
BER92_12810	SSF48019	post-AAA+ oligomerization domain-like
BER92_12810	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_12820	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
BER92_12820	SSF50677	ValRS/IleRS/LeuRS editing domain
BER92_12820	SSF52374	Nucleotidylyl transferase
BER92_12830	SSF48452	TPR-like
BER92_12830	SSF52833	Thioredoxin-like
BER92_12855	SSF53955	Lysozyme-like
BER92_12880	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_12910	SSF160544	EscU C-terminal domain-like
BER92_12925	SSF101801	Surface presentation of antigens (SPOA)
BER92_12960	SSF69635	Type III secretory system chaperone-like
BER92_12965	SSF51126	Pectin lyase-like
BER92_12995	SSF50891	Cyclophilin-like
BER92_13025	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_13025	SSF90123	ABC transporter transmembrane region
BER92_13045	SSF117396	TM1631-like
BER92_13050	SSF103481	Multidrug resistance efflux transporter EmrE
BER92_13060	SSF55120	Pseudouridine synthase
BER92_13060	SSF55174	Alpha-L RNA-binding motif
BER92_13070	SSF141868	EAL domain-like
BER92_13070	SSF55073	Nucleotide cyclase
BER92_13070	SSF55785	PYP-like sensor domain (PAS domain)
BER92_13075	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_13085	SSF55174	Alpha-L RNA-binding motif
BER92_13100	SSF161084	MAPEG domain-like
BER92_13120	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
BER92_13120	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
BER92_13135	SSF56935	Porins
BER92_13145	SSF50692	ADC-like
BER92_13145	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
BER92_13145	SSF54292	2Fe-2S ferredoxin-like
BER92_13145	SSF54862	4Fe-4S ferredoxins
BER92_13155	SSF49785	Galactose-binding domain-like
BER92_13155	SSF52743	Subtilisin-like
BER92_13180	SSF51445	(Trans)glycosidases
BER92_13190	SSF46785	"Winged helix" DNA-binding domain
BER92_13195	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
BER92_13195	SSF52374	Nucleotidylyl transferase
BER92_13220	SSF54001	Cysteine proteinases
BER92_13225	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_13230	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BER92_13235	SSF141259	CarD-like
BER92_13235	SSF143517	TRCF domain-like
BER92_13235	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_13240	SSF48334	DNA repair protein MutS, domain III
BER92_13240	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_13240	SSF53150	DNA repair protein MutS, domain II
BER92_13240	SSF55271	DNA repair protein MutS, domain I
BER92_13245	SSF48113	Heme-dependent peroxidases
BER92_13260	SSF46689	Homeodomain-like
BER92_13280	SSF53254	Phosphoglycerate mutase-like
BER92_13320	SSF56784	HAD-like
BER92_13335	SSF53448	Nucleotide-diphospho-sugar transferases
BER92_13345	SSF56003	Molybdenum cofactor-binding domain
BER92_13350	SSF55073	Nucleotide cyclase
BER92_13355	SSF50249	Nucleic acid-binding proteins
BER92_13365	SSF48576	Terpenoid synthases
BER92_13370	SSF53474	alpha/beta-Hydrolases
BER92_13375	SSF53244	MurD-like peptide ligases, peptide-binding domain
BER92_13375	SSF53623	MurD-like peptide ligases, catalytic domain
BER92_13390	SSF50621	Alanine racemase C-terminal domain-like
BER92_13390	SSF51419	PLP-binding barrel
BER92_13390	SSF53633	Carbamate kinase-like
BER92_13390	SSF55021	ACT-like
BER92_13395	SSF54506	Diaminopimelate epimerase-like
BER92_13400	SSF54506	Diaminopimelate epimerase-like
BER92_13410	SSF82784	OsmC-like
BER92_13415	SSF53671	Aspartate/ornithine carbamoyltransferase
BER92_13420	SSF53098	Ribonuclease H-like
BER92_13425	SSF143456	VC0467-like
BER92_13430	SSF48150	DNA-glycosylase
BER92_13445	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_13450	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_13455	SSF51419	PLP-binding barrel
BER92_13460	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
BER92_13460	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_13465	SSF47729	IHF-like DNA-binding proteins
BER92_13485	SSF82199	SET domain
BER92_13490	SSF46785	"Winged helix" DNA-binding domain
BER92_13495	SSF101960	Stabilizer of iron transporter SufD
BER92_13500	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_13505	SSF101960	Stabilizer of iron transporter SufD
BER92_13510	SSF53383	PLP-dependent transferases
BER92_13515	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BER92_13520	SSF50022	ISP domain
BER92_13525	SSF56935	Porins
BER92_13530	SSF51197	Clavaminate synthase-like
BER92_13535	SSF81901	HCP-like
BER92_13540	SSF46689	Homeodomain-like
BER92_13555	SSF51182	RmlC-like cupins
BER92_13560	SSF47781	RuvA domain 2-like
BER92_13565	SSF53187	Zn-dependent exopeptidases
BER92_13575	SSF56112	Protein kinase-like (PK-like)
BER92_13580	SSF53448	Nucleotide-diphospho-sugar transferases
BER92_13590	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_13605	SSF55326	PurM N-terminal domain-like
BER92_13605	SSF56042	PurM C-terminal domain-like
BER92_13610	SSF53328	Formyltransferase
BER92_13635	SSF55205	EPT/RTPC-like
BER92_13640	SSF82657	BolA-like
BER92_13645	SSF53697	SIS domain
BER92_13650	SSF56784	HAD-like
BER92_13665	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_13675	SSF69754	Ribosome binding protein Y (YfiA homologue)
BER92_13680	SSF55804	Phoshotransferase/anion transport protein
BER92_13685	SSF53795	PEP carboxykinase-like
BER92_13685	SSF75138	HprK N-terminal domain-like
BER92_13690	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_13695	SSF53062	PTS system fructose IIA component-like
BER92_13700	SSF55594	HPr-like
BER92_13705	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
BER92_13705	SSF51621	Phosphoenolpyruvate/pyruvate domain
BER92_13705	SSF52009	Phosphohistidine domain
BER92_13710	SSF158791	MgtE N-terminal domain-like
BER92_13710	SSF161093	MgtE membrane domain-like
BER92_13710	SSF54631	CBS-domain pair
BER92_13715	SSF46689	Homeodomain-like
BER92_13740	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_13745	SSF53067	Actin-like ATPase domain
BER92_13750	SSF56935	Porins
BER92_13755	SSF51445	(Trans)glycosidases
BER92_13760	SSF51445	(Trans)glycosidases
BER92_13765	SSF51445	(Trans)glycosidases
BER92_13765	SSF55545	beta-N-acetylhexosaminidase-like domain
BER92_13770	SSF49303	beta-Galactosidase/glucuronidase domain
BER92_13770	SSF49785	Galactose-binding domain-like
BER92_13770	SSF51445	(Trans)glycosidases
BER92_13775	SSF51445	(Trans)glycosidases
BER92_13775	SSF52279	Beta-D-glucan exohydrolase, C-terminal domain
BER92_13775	SSF56988	Anthrax protective antigen
BER92_13785	SSF46689	Homeodomain-like
BER92_13795	SSF55486	Metalloproteases ("zincins"), catalytic domain
BER92_13815	SSF53098	Ribonuclease H-like
BER92_13820	SSF46689	Homeodomain-like
BER92_13835	SSF55486	Metalloproteases ("zincins"), catalytic domain
BER92_13835	SSF63737	Leukotriene A4 hydrolase N-terminal domain
BER92_13840	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_13850	SSF117892	Band 7/SPFH domain
BER92_13855	SSF117892	Band 7/SPFH domain
BER92_13860	SSF52172	CheY-like
BER92_13865	SSF46565	Chaperone J-domain
BER92_13865	SSF49493	HSP40/DnaJ peptide-binding domain
BER92_13870	SSF49764	HSP20-like chaperones
BER92_13875	SSF52833	Thioredoxin-like
BER92_13880	SSF47240	Ferritin-like
BER92_13915	SSF53590	Nucleoside hydrolase
BER92_13920	SSF56935	Porins
BER92_13925	SSF54506	Diaminopimelate epimerase-like
BER92_13930	SSF52016	LeuD/IlvD-like
BER92_13930	SSF53732	Aconitase iron-sulfur domain
BER92_13935	SSF48256	Citrate synthase
BER92_13940	SSF51621	Phosphoenolpyruvate/pyruvate domain
BER92_13945	SSF159800	PrpR receptor domain-like
BER92_13945	SSF46689	Homeodomain-like
BER92_13945	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_13980	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_13990	SSF56322	ADC synthase
BER92_13995	SSF53901	Thiolase-like
BER92_14000	SSF47336	ACP-like
BER92_14005	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_14010	SSF52151	FabD/lysophospholipase-like
BER92_14010	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
BER92_14015	SSF53901	Thiolase-like
BER92_14020	SSF57829	Zn-binding ribosomal proteins
BER92_14030	SSF52972	ITPase-like
BER92_14040	SSF53448	Nucleotide-diphospho-sugar transferases
BER92_14050	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_14060	SSF54001	Cysteine proteinases
BER92_14070	SSF54197	HIT-like
BER92_14075	SSF111304	Recombination protein RecR
BER92_14080	SSF82607	YbaB-like
BER92_14085	SSF48019	post-AAA+ oligomerization domain-like
BER92_14085	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_14100	SSF54690	Molybdopterin synthase subunit MoaE
BER92_14105	SSF54285	MoaD/ThiS
BER92_14110	SSF55040	Molybdenum cofactor biosynthesis protein C, MoaC
BER92_14115	SSF102114	Radical SAM enzymes
BER92_14120	SSF56281	Metallo-hydrolase/oxidoreductase
BER92_14125	SSF56112	Protein kinase-like (PK-like)
BER92_14130	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BER92_14145	SSF81606	PP2C-like
BER92_14150	SSF53098	Ribonuclease H-like
BER92_14155	SSF53098	Ribonuclease H-like
BER92_14160	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_14165	SSF56281	Metallo-hydrolase/oxidoreductase
BER92_14170	SSF53955	Lysozyme-like
BER92_14170	SSF54106	LysM domain
BER92_14180	SSF46946	S13-like H2TH domain
BER92_14180	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
BER92_14180	SSF81624	N-terminal domain of MutM-like DNA repair proteins
BER92_14185	SSF53474	alpha/beta-Hydrolases
BER92_14185	SSF82171	DPP6 N-terminal domain-like
BER92_14200	SSF109604	HD-domain/PDEase-like
BER92_14220	SSF89550	PHP domain-like
BER92_14225	SSF56672	DNA/RNA polymerases
BER92_14230	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_14235	SSF46785	"Winged helix" DNA-binding domain
BER92_14235	SSF51306	LexA/Signal peptidase
BER92_14270	SSF47741	CO dehydrogenase ISP C-domain like
BER92_14270	SSF54292	2Fe-2S ferredoxin-like
BER92_14275	SSF55447	CO dehydrogenase flavoprotein C-terminal domain-like
BER92_14275	SSF56176	FAD-binding/transporter-associated domain-like
BER92_14280	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
BER92_14280	SSF56003	Molybdenum cofactor-binding domain
BER92_14285	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_14320	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_14355	SSF102735	Trigger factor ribosome-binding domain
BER92_14355	SSF109998	Triger factor/SurA peptide-binding domain-like
BER92_14355	SSF54534	FKBP-like
BER92_14360	SSF52096	ClpP/crotonase
BER92_14365	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_14365	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
BER92_14370	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_14370	SSF54211	Ribosomal protein S5 domain 2-like
BER92_14370	SSF88697	PUA domain-like
BER92_14375	SSF47729	IHF-like DNA-binding proteins
BER92_14395	SSF109998	Triger factor/SurA peptide-binding domain-like
BER92_14395	SSF54534	FKBP-like
BER92_14420	SSF102114	Radical SAM enzymes
BER92_14425	SSF48452	TPR-like
BER92_14430	SSF103088	OmpA-like
BER92_14435	SSF52964	TolB, N-terminal domain
BER92_14435	SSF69304	Tricorn protease N-terminal domain
BER92_14440	SSF74653	TolA/TonB C-terminal domain
BER92_14455	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
BER92_14460	SSF46785	"Winged helix" DNA-binding domain
BER92_14460	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_14470	SSF46929	DNA helicase RuvA subunit, C-terminal domain
BER92_14470	SSF47781	RuvA domain 2-like
BER92_14470	SSF50249	Nucleic acid-binding proteins
BER92_14475	SSF53098	Ribonuclease H-like
BER92_14480	SSF75625	YebC-like
BER92_14485	SSF53474	alpha/beta-Hydrolases
BER92_14490	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BER92_14495	SSF50249	Nucleic acid-binding proteins
BER92_14495	SSF55261	GAD domain-like
BER92_14495	SSF55681	Class II aaRS and biotin synthetases
BER92_14510	SSF47090	PGBD-like
BER92_14510	SSF53955	Lysozyme-like
BER92_14515	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_14520	SSF56935	Porins
BER92_14535	SSF56935	Porins
BER92_14540	SSF56935	Porins
BER92_14545	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_14565	SSF51556	Metallo-dependent hydrolases
BER92_14585	SSF158472	HAMP domain-like
BER92_14585	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
BER92_14595	SSF53474	alpha/beta-Hydrolases
BER92_14600	SSF46894	C-terminal effector domain of the bipartite response regulators
BER92_14600	SSF75516	Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
BER92_14610	SSF50494	Trypsin-like serine proteases
BER92_14635	SSF52440	PreATP-grasp domain
BER92_14635	SSF56059	Glutathione synthetase ATP-binding domain-like
BER92_14675	SSF50475	FMN-binding split barrel
BER92_14680	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_14685	SSF56796	Dehydroquinate synthase-like
BER92_14690	SSF142921	WGR domain-like
BER92_14695	SSF51726	UROD/MetE-like
BER92_14700	SSF103473	MFS general substrate transporter
BER92_14710	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER92_14710	SSF52172	CheY-like
BER92_14710	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER92_14710	SSF63829	Calcium-dependent phosphotriesterase
BER92_14715	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER92_14715	SSF52172	CheY-like
BER92_14715	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER92_14715	SSF63829	Calcium-dependent phosphotriesterase
BER92_14735	SSF52172	CheY-like
BER92_14740	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER92_14740	SSF55785	PYP-like sensor domain (PAS domain)
BER92_14740	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER92_14755	SSF55781	GAF domain-like
BER92_14770	SSF46689	Homeodomain-like
BER92_14770	SSF48452	TPR-like
BER92_14775	SSF46894	C-terminal effector domain of the bipartite response regulators
BER92_14775	SSF52172	CheY-like
BER92_14785	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_14785	SSF54211	Ribosomal protein S5 domain 2-like
BER92_14790	SSF50156	PDZ domain-like
BER92_14800	SSF81452	Cytochrome c oxidase subunit III-like
BER92_14805	SSF81442	Cytochrome c oxidase subunit I-like
BER92_14810	SSF49503	Cupredoxins
BER92_14810	SSF81464	Cytochrome c oxidase subunit II-like, transmembrane region
BER92_14830	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
BER92_14830	SSF50677	ValRS/IleRS/LeuRS editing domain
BER92_14830	SSF52374	Nucleotidylyl transferase
BER92_14835	SSF52374	Nucleotidylyl transferase
BER92_14835	SSF82114	Riboflavin kinase-like
BER92_14845	SSF46992	Ribosomal protein S20
BER92_14850	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_14850	SSF82051	Obg GTP-binding protein N-terminal domain
BER92_14855	SSF110324	Ribosomal L27 protein-like
BER92_14860	SSF141091	L21p-like
BER92_14865	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_14870	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
BER92_14875	SSF110087	DR1885-like metal-binding protein
BER92_14880	SSF52096	ClpP/crotonase
BER92_14885	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
BER92_14905	SSF47473	EF-hand
BER92_14910	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BER92_14915	SSF56219	DNase I-like
BER92_14935	SSF46689	Homeodomain-like
BER92_14940	SSF51246	Rudiment single hybrid motif
BER92_14940	SSF52440	PreATP-grasp domain
BER92_14940	SSF56059	Glutathione synthetase ATP-binding domain-like
BER92_14945	SSF117892	Band 7/SPFH domain
BER92_14955	SSF47598	Ribbon-helix-helix
BER92_14965	SSF55166	Hedgehog/DD-peptidase
BER92_14970	SSF48150	DNA-glycosylase
BER92_14980	SSF55961	Bet v1-like
BER92_14985	SSF46894	C-terminal effector domain of the bipartite response regulators
BER92_14985	SSF52172	CheY-like
BER92_14990	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER92_14995	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BER92_15000	SSF63848	Cell-division inhibitor MinC, C-terminal domain
BER92_15005	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_15010	SSF55229	Cell division protein MinE topological specificity domain
BER92_15020	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER92_15020	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER92_15025	SSF46894	C-terminal effector domain of the bipartite response regulators
BER92_15025	SSF52172	CheY-like
BER92_15035	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
BER92_15040	SSF53649	Alkaline phosphatase-like
BER92_15060	SSF53383	PLP-dependent transferases
BER92_15065	SSF52317	Class I glutamine amidotransferase-like
BER92_15065	SSF56634	Heme-dependent catalase-like
BER92_15075	SSF46689	Homeodomain-like
BER92_15075	SSF55785	PYP-like sensor domain (PAS domain)
BER92_15115	SSF51621	Phosphoenolpyruvate/pyruvate domain
BER92_15120	SSF56935	Porins
BER92_15125	SSF56059	Glutathione synthetase ATP-binding domain-like
BER92_15135	SSF103473	MFS general substrate transporter
BER92_15145	SSF50621	Alanine racemase C-terminal domain-like
BER92_15145	SSF51419	PLP-binding barrel
BER92_15150	SSF56935	Porins
BER92_15160	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_15160	SSF81923	Double Clp-N motif
BER92_15215	SSF69255	gp5 N-terminal domain-like
BER92_15215	SSF69279	Phage tail proteins
BER92_15220	SSF53098	Ribonuclease H-like
BER92_15225	SSF46689	Homeodomain-like
BER92_15245	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER92_15280	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
BER92_15285	SSF69118	AhpD-like
BER92_15290	SSF52833	Thioredoxin-like
BER92_15300	SSF48452	TPR-like
BER92_15305	SSF46894	C-terminal effector domain of the bipartite response regulators
BER92_15305	SSF52172	CheY-like
BER92_15310	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER92_15310	SSF55785	PYP-like sensor domain (PAS domain)
BER92_15310	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER92_15315	SSF140356	PPK N-terminal domain-like
BER92_15315	SSF143724	PHP14-like
BER92_15315	SSF56024	Phospholipase D/nuclease
BER92_15320	SSF109604	HD-domain/PDEase-like
BER92_15320	SSF53067	Actin-like ATPase domain
BER92_15330	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
BER92_15335	SSF56300	Metallo-dependent phosphatases
BER92_15345	SSF55486	Metalloproteases ("zincins"), catalytic domain
BER92_15355	SSF47240	Ferritin-like
BER92_15360	SSF53271	PRTase-like
BER92_15360	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
BER92_15370	SSF110997	Sporulation related repeat
BER92_15375	SSF53244	MurD-like peptide ligases, peptide-binding domain
BER92_15375	SSF53623	MurD-like peptide ligases, catalytic domain
BER92_15380	SSF52058	L domain-like
BER92_15400	SSF48208	Six-hairpin glycosidases
BER92_15405	SSF48208	Six-hairpin glycosidases
BER92_15410	SSF49785	Galactose-binding domain-like
BER92_15410	SSF51445	(Trans)glycosidases
BER92_15425	SSF56112	Protein kinase-like (PK-like)
BER92_15450	SSF116734	DNA methylase specificity domain
BER92_15455	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_15470	SSF116734	DNA methylase specificity domain
BER92_15475	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_15495	SSF46689	Homeodomain-like
BER92_15505	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BER92_15510	SSF102220	DNA polymerase III psi subunit
BER92_15525	SSF52954	Class II aaRS ABD-related
BER92_15525	SSF55681	Class II aaRS and biotin synthetases
BER92_15525	SSF55826	YbaK/ProRS associated domain
BER92_15530	SSF81273	H-NS histone-like proteins
BER92_15545	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_15555	SSF159594	XCC0632-like
BER92_15565	SSF51905	FAD/NAD(P)-binding domain
BER92_15565	SSF54373	FAD-linked reductases, C-terminal domain
BER92_15565	SSF54862	4Fe-4S ferredoxins
BER92_15570	SSF56784	HAD-like
BER92_15575	SSF100950	NagB/RpiA/CoA transferase-like
BER92_15580	SSF100950	NagB/RpiA/CoA transferase-like
BER92_15585	SSF53738	Phosphoglucomutase, first 3 domains
BER92_15585	SSF55957	Phosphoglucomutase, C-terminal domain
BER92_15590	SSF51182	RmlC-like cupins
BER92_15590	SSF53448	Nucleotide-diphospho-sugar transferases
BER92_15595	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_15600	SSF51182	RmlC-like cupins
BER92_15605	SSF53448	Nucleotide-diphospho-sugar transferases
BER92_15610	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_15615	SSF52402	Adenine nucleotide alpha hydrolases-like
BER92_15620	SSF52402	Adenine nucleotide alpha hydrolases-like
BER92_15620	SSF52467	DHS-like NAD/FAD-binding domain
BER92_15625	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_15630	SSF53448	Nucleotide-diphospho-sugar transferases
BER92_15650	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_15655	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_15665	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BER92_15670	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BER92_15675	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_15675	SSF56112	Protein kinase-like (PK-like)
BER92_15680	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_15690	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BER92_15695	SSF53383	PLP-dependent transferases
BER92_15700	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
BER92_15700	SSF54631	CBS-domain pair
BER92_15710	SSF103088	OmpA-like
BER92_15720	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_15730	SSF47616	GST C-terminal domain-like
BER92_15730	SSF52833	Thioredoxin-like
BER92_15735	SSF56529	FAH
BER92_15740	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_15745	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
BER92_15755	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_15760	SSF55781	GAF domain-like
BER92_15785	SSF56784	HAD-like
BER92_15790	SSF100879	Lesion bypass DNA polymerase (Y-family), little finger domain
BER92_15790	SSF56672	DNA/RNA polymerases
BER92_15800	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
BER92_15805	SSF53901	Thiolase-like
BER92_15815	SSF55486	Metalloproteases ("zincins"), catalytic domain
BER92_15820	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
BER92_15830	SSF49503	Cupredoxins
BER92_15840	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
BER92_15850	SSF53697	SIS domain
BER92_15850	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
BER92_15865	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER92_15870	SSF51126	Pectin lyase-like
BER92_15875	SSF51161	Trimeric LpxA-like enzymes
BER92_15875	SSF53448	Nucleotide-diphospho-sugar transferases
BER92_15885	SSF48600	Chorismate mutase II
BER92_15890	SSF46604	Epsilon subunit of F1F0-ATP synthase C-terminal domain
BER92_15890	SSF51344	Epsilon subunit of F1F0-ATP synthase N-terminal domain
BER92_15895	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
BER92_15895	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
BER92_15895	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_15900	SSF52943	ATP synthase (F1-ATPase), gamma subunit
BER92_15905	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
BER92_15905	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
BER92_15905	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_15910	SSF47928	N-terminal domain of the delta subunit of the F1F0-ATP synthase
BER92_15915	SSF81573	F1F0 ATP synthase subunit B, membrane domain
BER92_15920	SSF81333	F1F0 ATP synthase subunit C
BER92_15925	SSF81336	F1F0 ATP synthase subunit A
BER92_15940	SSF51230	Single hybrid motif
BER92_15940	SSF51905	FAD/NAD(P)-binding domain
BER92_15940	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
BER92_15955	SSF52141	Uracil-DNA glycosylase-like
BER92_15960	SSF56925	OMPA-like
BER92_15970	SSF53850	Periplasmic binding protein-like II
BER92_15975	SSF161098	MetI-like
BER92_15980	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_15980	SSF55021	ACT-like
BER92_15985	SSF89963	YajQ-like
BER92_16030	SSF55120	Pseudouridine synthase
BER92_16035	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_16045	SSF50952	Soluble quinoprotein glucose dehydrogenase
BER92_16055	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER92_16055	SSF52172	CheY-like
BER92_16055	SSF55785	PYP-like sensor domain (PAS domain)
BER92_16055	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER92_16075	SSF50621	Alanine racemase C-terminal domain-like
BER92_16075	SSF51419	PLP-binding barrel
BER92_16080	SSF51905	FAD/NAD(P)-binding domain
BER92_16080	SSF54373	FAD-linked reductases, C-terminal domain
BER92_16095	SSF51316	Mss4-like
BER92_16105	SSF103088	OmpA-like
BER92_16120	SSF55103	FAD-linked oxidases, C-terminal domain
BER92_16175	SSF81301	Nucleotidyltransferase
BER92_16175	SSF81891	Poly A polymerase C-terminal region-like
BER92_16185	SSF48435	Bacterial muramidases
BER92_16185	SSF53955	Lysozyme-like
BER92_16190	SSF48371	ARM repeat
BER92_16205	SSF53098	Ribonuclease H-like
BER92_16255	SSF52304	Type II 3-dehydroquinate dehydratase
BER92_16260	SSF51230	Single hybrid motif
BER92_16270	SSF51246	Rudiment single hybrid motif
BER92_16270	SSF52440	PreATP-grasp domain
BER92_16270	SSF56059	Glutathione synthetase ATP-binding domain-like
BER92_16275	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_16285	SSF47413	lambda repressor-like DNA-binding domains
BER92_16295	SSF46689	Homeodomain-like
BER92_16300	SSF69349	Phage fibre proteins
BER92_16305	SSF52335	Methylglyoxal synthase-like
BER92_16305	SSF53927	Cytidine deaminase-like
BER92_16310	SSF51246	Rudiment single hybrid motif
BER92_16310	SSF52440	PreATP-grasp domain
BER92_16310	SSF56059	Glutathione synthetase ATP-binding domain-like
BER92_16320	SSF103473	MFS general substrate transporter
BER92_16335	SSF103473	MFS general substrate transporter
BER92_16335	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
BER92_16355	SSF55811	Nudix
BER92_16360	SSF56349	DNA breaking-rejoining enzymes
BER92_16375	SSF46689	Homeodomain-like
BER92_16380	SSF53098	Ribonuclease H-like
BER92_16390	SSF56954	Outer membrane efflux proteins (OEP)
BER92_16410	SSF51726	UROD/MetE-like
BER92_16425	SSF46785	"Winged helix" DNA-binding domain
BER92_16430	SSF143975	IlvD/EDD N-terminal domain-like
BER92_16430	SSF52016	LeuD/IlvD-like
BER92_16435	SSF51161	Trimeric LpxA-like enzymes
BER92_16450	SSF46689	Homeodomain-like
BER92_16455	SSF53098	Ribonuclease H-like
BER92_16470	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
BER92_16475	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
BER92_16475	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
BER92_16485	SSF53328	Formyltransferase
BER92_16485	SSF55021	ACT-like
BER92_16490	SSF51395	FMN-linked oxidoreductases
BER92_16495	SSF52467	DHS-like NAD/FAD-binding domain
BER92_16505	SSF103473	MFS general substrate transporter
BER92_16510	SSF51556	Metallo-dependent hydrolases
BER92_16525	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_16545	SSF55120	Pseudouridine synthase
BER92_16550	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_16555	SSF51430	NAD(P)-linked oxidoreductase
BER92_16560	SSF50129	GroES-like
BER92_16560	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_16565	SSF51430	NAD(P)-linked oxidoreductase
BER92_16575	SSF82784	OsmC-like
BER92_16585	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_16590	SSF53474	alpha/beta-Hydrolases
BER92_16610	SSF56219	DNase I-like
BER92_16615	SSF46626	Cytochrome c
BER92_16625	SSF46689	Homeodomain-like
BER92_16625	SSF48498	Tetracyclin repressor-like, C-terminal domain
BER92_16630	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
BER92_16630	SSF56645	Acyl-CoA dehydrogenase NM domain-like
BER92_16635	SSF52096	ClpP/crotonase
BER92_16640	SSF51230	Single hybrid motif
BER92_16640	SSF51246	Rudiment single hybrid motif
BER92_16640	SSF52440	PreATP-grasp domain
BER92_16640	SSF56059	Glutathione synthetase ATP-binding domain-like
BER92_16655	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_16680	SSF53098	Ribonuclease H-like
BER92_16690	SSF46689	Homeodomain-like
BER92_16700	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
BER92_16700	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
BER92_16700	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
BER92_16705	SSF111369	HlyD-like secretion proteins
BER92_16710	SSF50447	Translation proteins
BER92_16710	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
BER92_16710	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_16715	SSF52402	Adenine nucleotide alpha hydrolases-like
BER92_16720	SSF52218	Flavoproteins
BER92_16720	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
BER92_16720	SSF63380	Riboflavin synthase domain-like
BER92_16725	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
BER92_16725	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
BER92_16730	SSF52402	Adenine nucleotide alpha hydrolases-like
BER92_16740	SSF56935	Porins
BER92_16750	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER92_16750	SSF55781	GAF domain-like
BER92_16750	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER92_16760	SSF46785	"Winged helix" DNA-binding domain
BER92_16760	SSF53850	Periplasmic binding protein-like II
BER92_16765	SSF53790	Tetrapyrrole methylase
BER92_16770	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
BER92_16780	SSF51569	Aldolase
BER92_16785	SSF50800	PK beta-barrel domain-like
BER92_16785	SSF51621	Phosphoenolpyruvate/pyruvate domain
BER92_16785	SSF52935	PK C-terminal domain-like
BER92_16790	SSF56784	HAD-like
BER92_16795	SSF53748	Phosphoglycerate kinase
BER92_16820	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER92_16825	SSF53383	PLP-dependent transferases
BER92_16830	SSF52402	Adenine nucleotide alpha hydrolases-like
BER92_16835	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_16860	SSF46689	Homeodomain-like
BER92_16865	SSF53098	Ribonuclease H-like
BER92_16890	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_16890	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
BER92_16895	SSF56925	OMPA-like
BER92_16900	SSF48537	Phospholipase C/P1 nuclease
BER92_16905	SSF56281	Metallo-hydrolase/oxidoreductase
BER92_16910	SSF53850	Periplasmic binding protein-like II
BER92_16915	SSF161098	MetI-like
BER92_16920	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_16935	SSF46785	"Winged helix" DNA-binding domain
BER92_16945	SSF141523	L,D-transpeptidase catalytic domain-like
BER92_16945	SSF47090	PGBD-like
BER92_16950	SSF51261	Duplicated hybrid motif
BER92_16955	SSF56935	Porins
BER92_16960	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
BER92_16960	SSF52922	TK C-terminal domain-like
BER92_16965	SSF118215	Proton glutamate symport protein
BER92_16975	SSF48452	TPR-like
BER92_16975	SSF53300	vWA-like
BER92_16980	SSF53300	vWA-like
BER92_16995	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_17060	SSF82153	FAS1 domain
BER92_17065	SSF52141	Uracil-DNA glycosylase-like
BER92_17070	SSF102114	Radical SAM enzymes
BER92_17070	SSF47781	RuvA domain 2-like
BER92_17075	SSF51430	NAD(P)-linked oxidoreductase
BER92_17080	SSF53448	Nucleotide-diphospho-sugar transferases
BER92_17085	SSF55486	Metalloproteases ("zincins"), catalytic domain
BER92_17115	SSF47240	Ferritin-like
BER92_17120	SSF47240	Ferritin-like
BER92_17125	SSF143081	BB1717-like
BER92_17135	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
BER92_17135	SSF52738	Methylesterase CheB, C-terminal domain
BER92_17135	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_17135	SSF55785	PYP-like sensor domain (PAS domain)
BER92_17140	SSF52172	CheY-like
BER92_17150	SSF46689	Homeodomain-like
BER92_17150	SSF52172	CheY-like
BER92_17150	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_17175	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_17180	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_17185	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BER92_17190	SSF51971	Nucleotide-binding domain
BER92_17190	SSF54373	FAD-linked reductases, C-terminal domain
BER92_17195	SSF51445	(Trans)glycosidases
BER92_17200	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_17200	SSF90123	ABC transporter transmembrane region
BER92_17215	SSF50129	GroES-like
BER92_17215	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_17245	SSF103088	OmpA-like
BER92_17255	SSF56935	Porins
BER92_17270	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_17300	SSF52091	SpoIIaa-like
BER92_17325	SSF46689	Homeodomain-like
BER92_17340	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_17345	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
BER92_17345	SSF52922	TK C-terminal domain-like
BER92_17365	SSF103190	Sensory domain-like
BER92_17365	SSF158472	HAMP domain-like
BER92_17365	SSF81606	PP2C-like
BER92_17370	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER92_17375	SSF52091	SpoIIaa-like
BER92_17390	SSF52151	FabD/lysophospholipase-like
BER92_17390	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
BER92_17405	SSF52096	ClpP/crotonase
BER92_17410	SSF52096	ClpP/crotonase
BER92_17425	SSF63380	Riboflavin synthase domain-like
BER92_17435	SSF101874	YceI-like
BER92_17440	SSF55469	FMN-dependent nitroreductase-like
BER92_17455	SSF81301	Nucleotidyltransferase
BER92_17455	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
BER92_17460	SSF51182	RmlC-like cupins
BER92_17465	SSF63829	Calcium-dependent phosphotriesterase
BER92_17475	SSF100950	NagB/RpiA/CoA transferase-like
BER92_17485	SSF51569	Aldolase
BER92_17505	SSF48592	GroEL equatorial domain-like
BER92_17505	SSF52029	GroEL apical domain-like
BER92_17505	SSF54849	GroEL-intermediate domain like
BER92_17510	SSF50129	GroES-like
BER92_17525	SSF54913	GlnB-like
BER92_17530	SSF52833	Thioredoxin-like
BER92_17530	SSF74863	Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)
BER92_17560	SSF53098	Ribonuclease H-like
BER92_17565	SSF46689	Homeodomain-like
BER92_17570	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_17575	SSF51011	Glycosyl hydrolase domain
BER92_17575	SSF51445	(Trans)glycosidases
BER92_17575	SSF81296	E set domains
BER92_17585	SSF51445	(Trans)glycosidases
BER92_17590	SSF51445	(Trans)glycosidases
BER92_17595	SSF51445	(Trans)glycosidases
BER92_17595	SSF81296	E set domains
BER92_17600	SSF51011	Glycosyl hydrolase domain
BER92_17600	SSF51445	(Trans)glycosidases
BER92_17600	SSF81296	E set domains
BER92_17605	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BER92_17610	SSF55073	Nucleotide cyclase
BER92_17615	SSF51445	(Trans)glycosidases
BER92_17625	SSF56112	Protein kinase-like (PK-like)
BER92_17630	SSF50182	Sm-like ribonucleoproteins
BER92_17630	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
BER92_17630	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
BER92_17635	SSF69754	Ribosome binding protein Y (YfiA homologue)
BER92_17650	SSF53271	PRTase-like
BER92_17655	SSF102114	Radical SAM enzymes
BER92_17660	SSF53383	PLP-dependent transferases
BER92_17670	SSF53474	alpha/beta-Hydrolases
BER92_17685	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_17690	SSF51197	Clavaminate synthase-like
BER92_17705	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
BER92_17715	SSF51905	FAD/NAD(P)-binding domain
BER92_17730	SSF56112	Protein kinase-like (PK-like)
BER92_17740	SSF100950	NagB/RpiA/CoA transferase-like
BER92_17740	SSF46785	"Winged helix" DNA-binding domain
BER92_17745	SSF51905	FAD/NAD(P)-binding domain
BER92_17745	SSF54373	FAD-linked reductases, C-terminal domain
BER92_17750	SSF81338	Aquaporin-like
BER92_17755	SSF53067	Actin-like ATPase domain
BER92_17765	SSF46689	Homeodomain-like
BER92_17780	SSF55486	Metalloproteases ("zincins"), catalytic domain
BER92_17790	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
BER92_17795	SSF110916	Peptidyl-tRNA hydrolase domain-like
BER92_17810	SSF52833	Thioredoxin-like
BER92_17825	SSF56112	Protein kinase-like (PK-like)
BER92_17845	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_17850	SSF56801	Acetyl-CoA synthetase-like
BER92_17860	SSF53474	alpha/beta-Hydrolases
BER92_17880	SSF89360	HesB-like domain
BER92_17900	SSF141868	EAL domain-like
BER92_17900	SSF52172	CheY-like
BER92_17900	SSF55073	Nucleotide cyclase
BER92_17905	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
BER92_17905	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER92_17905	SSF52172	CheY-like
BER92_17905	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER92_17910	SSF47240	Ferritin-like
BER92_17920	SSF55811	Nudix
BER92_17935	SSF54211	Ribosomal protein S5 domain 2-like
BER92_17940	SSF52161	Ribosomal protein L13
BER92_17945	SSF47240	Ferritin-like
BER92_17955	SSF56276	S-adenosylmethionine decarboxylase
BER92_17960	SSF46785	"Winged helix" DNA-binding domain
BER92_17960	SSF51206	cAMP-binding domain-like
BER92_17965	SSF56784	HAD-like
BER92_17970	SSF51366	Ribulose-phoshate binding barrel
BER92_17975	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
BER92_17975	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
BER92_17985	SSF52317	Class I glutamine amidotransferase-like
BER92_18005	SSF53383	PLP-dependent transferases
BER92_18010	SSF53383	PLP-dependent transferases
BER92_18020	SSF52317	Class I glutamine amidotransferase-like
BER92_18030	SSF52317	Class I glutamine amidotransferase-like
BER92_18035	SSF54368	Glutamine synthetase, N-terminal domain
BER92_18035	SSF55931	Glutamine synthetase/guanido kinase
BER92_18040	SSF56322	ADC synthase
BER92_18045	SSF111331	NAD kinase/diacylglycerol kinase-like
BER92_18050	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BER92_18055	SSF51366	Ribulose-phoshate binding barrel
BER92_18060	SSF56925	OMPA-like
BER92_18065	SSF46565	Chaperone J-domain
BER92_18070	SSF56104	SAICAR synthase-like
BER92_18100	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_18140	SSF56784	HAD-like
BER92_18145	SSF47473	EF-hand
BER92_18150	SSF47473	EF-hand
BER92_18165	SSF55166	Hedgehog/DD-peptidase
BER92_18170	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
BER92_18175	SSF54001	Cysteine proteinases
BER92_18180	SSF51604	Enolase C-terminal domain-like
BER92_18180	SSF54826	Enolase N-terminal domain-like
BER92_18210	SSF50952	Soluble quinoprotein glucose dehydrogenase
BER92_18215	SSF51445	(Trans)glycosidases
BER92_18215	SSF52279	Beta-D-glucan exohydrolase, C-terminal domain
BER92_18220	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
BER92_18225	SSF53067	Actin-like ATPase domain
BER92_18235	SSF89095	GatB/YqeY motif
BER92_18245	SSF117023	DNA primase DnaG, C-terminal domain
BER92_18245	SSF56731	DNA primase core
BER92_18245	SSF57783	Zinc beta-ribbon
BER92_18270	SSF52833	Thioredoxin-like
BER92_18285	SSF81452	Cytochrome c oxidase subunit III-like
BER92_18290	SSF110111	Ctag/Cox11
BER92_18295	SSF81442	Cytochrome c oxidase subunit I-like
BER92_18300	SSF49503	Cupredoxins
BER92_18300	SSF81464	Cytochrome c oxidase subunit II-like, transmembrane region
BER92_18315	SSF51730	FAD-linked oxidoreductase
BER92_18315	SSF53720	ALDH-like
BER92_18315	SSF81935	N-terminal domain of bifunctional PutA protein
BER92_18320	SSF52374	Nucleotidylyl transferase
BER92_18320	SSF55174	Alpha-L RNA-binding motif
BER92_18325	SSF51261	Duplicated hybrid motif
BER92_18330	SSF53067	Actin-like ATPase domain
BER92_18340	SSF103473	MFS general substrate transporter
BER92_18350	SSF56219	DNase I-like
BER92_18355	SSF53271	PRTase-like
BER92_18365	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_18370	SSF110849	ParB/Sulfiredoxin
BER92_18385	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_18390	SSF53448	Nucleotide-diphospho-sugar transferases
BER92_18405	SSF53738	Phosphoglucomutase, first 3 domains
BER92_18405	SSF55957	Phosphoglucomutase, C-terminal domain
BER92_18410	SSF51283	dUTPase-like
BER92_18415	SSF102645	CoaB-like
BER92_18415	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
BER92_18420	SSF47781	RuvA domain 2-like
BER92_18425	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
BER92_18425	SSF52374	Nucleotidylyl transferase
BER92_18425	SSF55190	Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
BER92_18430	SSF110997	Sporulation related repeat
BER92_18435	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_18465	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BER92_18470	SSF47336	ACP-like
BER92_18470	SSF52777	CoA-dependent acyltransferases
BER92_18470	SSF53474	alpha/beta-Hydrolases
BER92_18470	SSF56801	Acetyl-CoA synthetase-like
BER92_18480	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER92_18480	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER92_18485	SSF52172	CheY-like
BER92_18495	SSF51395	FMN-linked oxidoreductases
BER92_18510	SSF48403	Ankyrin repeat
BER92_18515	SSF56634	Heme-dependent catalase-like
BER92_18520	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_18530	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_18530	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
BER92_18540	SSF52218	Flavoproteins
BER92_18540	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
BER92_18540	SSF63380	Riboflavin synthase domain-like
BER92_18545	SSF51569	Aldolase
BER92_18590	SSF54368	Glutamine synthetase, N-terminal domain
BER92_18590	SSF55931	Glutamine synthetase/guanido kinase
BER92_18595	SSF54913	GlnB-like
BER92_18600	SSF111352	Ammonium transporter
BER92_18605	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER92_18605	SSF55785	PYP-like sensor domain (PAS domain)
BER92_18605	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER92_18610	SSF46689	Homeodomain-like
BER92_18610	SSF52172	CheY-like
BER92_18610	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_18615	SSF49329	Cu,Zn superoxide dismutase-like
BER92_18620	SSF49329	Cu,Zn superoxide dismutase-like
BER92_18635	SSF48452	TPR-like
BER92_18650	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
BER92_18655	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
BER92_18660	SSF56024	Phospholipase D/nuclease
BER92_18665	SSF101874	YceI-like
BER92_18670	SSF53254	Phosphoglycerate mutase-like
BER92_18675	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_18695	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
BER92_18695	SSF52922	TK C-terminal domain-like
BER92_18695	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
BER92_18700	SSF46785	"Winged helix" DNA-binding domain
BER92_18705	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_18710	SSF56436	C-type lectin-like
BER92_18715	SSF53383	PLP-dependent transferases
BER92_18720	SSF161098	MetI-like
BER92_18720	SSF53850	Periplasmic binding protein-like II
BER92_18725	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_18730	SSF47473	EF-hand
BER92_18735	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_18740	SSF46785	"Winged helix" DNA-binding domain
BER92_18740	SSF54909	Dimeric alpha+beta barrel
BER92_18745	SSF56534	Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
BER92_18750	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_18755	SSF51182	RmlC-like cupins
BER92_18765	SSF47413	lambda repressor-like DNA-binding domains
BER92_18765	SSF53822	Periplasmic binding protein-like I
BER92_18785	SSF56529	FAH
BER92_18790	SSF53474	alpha/beta-Hydrolases
BER92_18795	SSF53474	alpha/beta-Hydrolases
BER92_18800	SSF51430	NAD(P)-linked oxidoreductase
BER92_18805	SSF51011	Glycosyl hydrolase domain
BER92_18805	SSF51445	(Trans)glycosidases
BER92_18805	SSF81296	E set domains
BER92_18810	SSF51011	Glycosyl hydrolase domain
BER92_18810	SSF51445	(Trans)glycosidases
BER92_18810	SSF56112	Protein kinase-like (PK-like)
BER92_18815	SSF51445	(Trans)glycosidases
BER92_18885	SSF51445	(Trans)glycosidases
BER92_18895	SSF51445	(Trans)glycosidases
BER92_18900	SSF50129	GroES-like
BER92_18900	SSF51735	NAD(P)-binding Rossmann-fold domains
BER92_18905	SSF46548	alpha-helical ferredoxin
BER92_18905	SSF51971	Nucleotide-binding domain
BER92_18910	SSF51395	FMN-linked oxidoreductases
BER92_18910	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
BER92_18910	SSF69336	Alpha subunit of glutamate synthase, C-terminal domain
BER92_18925	SSF109604	HD-domain/PDEase-like
BER92_18930	SSF55681	Class II aaRS and biotin synthetases
BER92_18935	SSF160246	EspE N-terminal domain-like
BER92_18935	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_18940	SSF52317	Class I glutamine amidotransferase-like
BER92_18970	SSF53800	Chelatase
BER92_18975	SSF53474	alpha/beta-Hydrolases
BER92_18990	SSF52402	Adenine nucleotide alpha hydrolases-like
BER92_18995	SSF47413	lambda repressor-like DNA-binding domains
BER92_18995	SSF53822	Periplasmic binding protein-like I
BER92_19005	SSF51445	(Trans)glycosidases
BER92_19025	SSF53098	Ribonuclease H-like
BER92_19030	SSF46689	Homeodomain-like
BER92_19055	SSF48613	Heme oxygenase-like
BER92_19065	SSF103473	MFS general substrate transporter
BER92_19070	SSF47090	PGBD-like
BER92_19070	SSF53955	Lysozyme-like
BER92_19070	SSF74650	Galactose mutarotase-like
BER92_19080	SSF54427	NTF2-like
BER92_19125	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
BER92_19130	SSF103473	MFS general substrate transporter
BER92_19175	SSF47413	lambda repressor-like DNA-binding domains
BER92_19180	SSF143011	RelE-like
BER92_19185	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_19190	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_19190	SSF52980	Restriction endonuclease-like
BER92_19195	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_19195	SSF52980	Restriction endonuclease-like
BER92_19200	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_19220	SSF52091	SpoIIaa-like
BER92_19235	SSF52833	Thioredoxin-like
BER92_19265	SSF55073	Nucleotide cyclase
BER92_19265	SSF55781	GAF domain-like
BER92_19265	SSF55785	PYP-like sensor domain (PAS domain)
BER92_19270	SSF110738	Glycerate kinase I
BER92_19285	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER92_19285	SSF88697	PUA domain-like
BER92_19300	SSF46689	Homeodomain-like
BER92_19310	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_19320	SSF54211	Ribosomal protein S5 domain 2-like
BER92_19335	SSF46689	Homeodomain-like
BER92_19335	SSF53041	Resolvase-like
BER92_19345	SSF53955	Lysozyme-like
BER92_19355	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_19360	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_19375	SSF54427	NTF2-like
BER92_19390	SSF101082	Typo IV secretion system protein TraC
BER92_19395	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_19435	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
BER92_19440	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_19445	SSF110849	ParB/Sulfiredoxin
BER92_19520	SSF47598	Ribbon-helix-helix
BER92_19530	SSF46689	Homeodomain-like
BER92_19530	SSF53041	Resolvase-like
BER92_19535	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_19565	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER92_19595	SSF46689	Homeodomain-like
BER92_19595	SSF53041	Resolvase-like
BER92_19630	SSF89447	AbrB/MazE/MraZ-like
BER92_19635	SSF88723	PIN domain-like
BER92_19650	SSF46689	Homeodomain-like
BER92_19650	SSF53041	Resolvase-like