locus-tag	class	description
BER93_00010	ENOG4105CZ8	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (By similarity)
BER93_00025	ENOG4105C7D	DNA gyrase negatively supercoils closed circular double- stranded DNA in an ATP-dependent manner and also catalyzes the interconversion of other topological isomers of double-stranded DNA rings, including catenanes and knotted rings (By similarity)
BER93_00035	ENOG4108K0D	peptidase, M48
BER93_00075	ENOG4105CSZ	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate (By similarity)
BER93_00085	ENOG4105CQX	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol (By similarity)
BER93_00100	ENOG4105CKF	membrane protein involved in aromatic hydrocarbon degradation
BER93_00115	ENOG4108JQ1	Dehydrogenase
BER93_00120	ENOG4105CN1	protease
BER93_00125	ENOG41063SB	peptidase
BER93_00130	ENOG4107VAM	peptidase, m28
BER93_00145	ENOG4105CQB	FAD linked oxidase domain protein
BER93_00165	ENOG4107ZQV	short-chain dehydrogenase reductase
BER93_00175	ENOG4105D07	Signal peptide peptidase, SppA
BER93_00180	ENOG4107QI1	Mate efflux family protein
BER93_00200	ENOG4105C25	Primosomal protein n'
BER93_00215	ENOG4105DEK	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (By similarity)
BER93_00220	ENOG4105D5S	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine (By similarity)
BER93_00225	ENOG4105CMP	catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR (By similarity)
BER93_00230	ENOG4105CRP	Part of the ABC transporter FtsEX involved in
BER93_00235	ENOG4105CAK	Cell division ATP-binding protein ftsE
BER93_00240	ENOG4105C1J	atp-dependent rna helicase
BER93_00245	ENOG4105K63	Thioredoxin
BER93_00250	ENOG4105C4P	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template (By similarity)
BER93_00260	ENOG4105E9K	Isocitrate dehydrogenase
BER93_00280	ENOG4109066	lysm domain bon superfamily protein
BER93_00300	ENOG4105BZS	acriflavin resistance protein
BER93_00320	ENOG4105E32	cytoplasmic protein
BER93_00335	ENOG4105DJ9	glucan biosynthesis protein
BER93_00340	ENOG4107104	thymidine kinase
BER93_00345	ENOG4105C4R	Atp-dependent dna helicase
BER93_00375	ENOG4108YXG	UPF0502 protein
BER93_00400	ENOG4105E55	glycerol-3-phosphate acyltransferase
BER93_00510	ENOG4105C1J	atp-dependent rna helicase
BER93_00515	ENOG4105C7S	Dehydrogenase
BER93_00525	ENOG4105CPP	Dehydrogenase, E1 component
BER93_00530	ENOG4107RUY	(E1 component), alpha subunit
BER93_00535	ENOG4105HJ8	Catalyzes the oxidative cleavage of the L-tryptophan (L- Trp) pyrrole ring (By similarity)
BER93_00540	ENOG4105DUX	Transporter
BER93_00560	ENOG4105E6K	4-Hydroxyphenylpyruvate dioxygenase
BER93_00565	ENOG4105F1J	Homogentisate 1,2-dioxygenase
BER93_00590	ENOG41063V1	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid (By similarity)
BER93_00600	ENOG4105E3A	(ABC) transporter
BER93_00605	ENOG4105DA5	(ABC) transporter
BER93_00610	ENOG4108JA0	Oxidoreductase, FAD NAD(P)-binding domain protein
BER93_00625	ENOG4108IUW	ABC transporter
BER93_00635	ENOG410822N	TonB family
BER93_00650	ENOG4105CYM	Glutathione S-transferase
BER93_00760	ENOG4105ED4	portal protein
BER93_00915	ENOG4105DG1	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (By similarity)
BER93_00930	ENOG4108Z7F	N-acetyltransferase
BER93_00935	ENOG4107T1C	Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate (By similarity)
BER93_00955	ENOG4106WTF	Glycosyl transferase, family 2
BER93_00965	ENOG4107SH3	glycosyl transferase, family 39
BER93_00970	ENOG4105CYJ	ribosomal RNA small subunit methyltransferase B
BER93_00975	ENOG4105CAE	Modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by (I) promoting its recognition by IF2 and (II) impairing its binding to EFTu-GTP (By similarity)
BER93_00980	ENOG4108Z02	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions (By similarity)
BER93_00985	ENOG4108WZM	domain protein
BER93_00990	ENOG4105C79	DNA protecting protein DprA
BER93_00995	ENOG4108RPN	Protein smg homolog
BER93_01010	ENOG4105C73	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone (By similarity)
BER93_01015	ENOG4105EK0	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine (By similarity)
BER93_01040	ENOG4105D05	Receptor
BER93_01045	ENOG4105CFU	surface antigen
BER93_01050	ENOG4105MA0	exported protein
BER93_01070	ENOG4108Z67	carbohydrate kinase, thermoresistant glucokinase family
BER93_01075	ENOG4105CT4	transporter
BER93_01085	ENOG4105BZU	Histidine kinase
BER93_01090	ENOG4108UI1	Probably functions as a manganese efflux pump (By similarity)
BER93_01095	ENOG4108K2P	TRANSCRIPTIONal
BER93_01100	ENOG4105EDR	glucose galactose transporter
BER93_01105	ENOG4105QJH	Domain of unknown function (DUF718)
BER93_01110	ENOG4105DIA	mandelate racemase muconate lactonizing
BER93_01120	ENOG4105I7Z	Short-chain dehydrogenase reductase Sdr
BER93_01140	ENOG4108IQF	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA (By similarity)
BER93_01150	ENOG41062QD	Membrane
BER93_01155	ENOG4107QN1	sodium solute
BER93_01160	ENOG4105CGK	Exodeoxyribonuclease III
BER93_01185	ENOG4105D28	Specifically methylates the N7 position of a guanine in 16S rRNA (By similarity)
BER93_01200	ENOG4105KDC	50s ribosomal protein l28
BER93_01205	ENOG4105W0E	50S ribosomal protein L33
BER93_01210	ENOG4105CQX	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol (By similarity)
BER93_01220	ENOG4105C4R	Atp-dependent dna helicase
BER93_01250	ENOG4105HJX	Biotin- acetyl-CoA-carboxylase ligase
BER93_01325	ENOG4105C31	Tryptophanyl-tRNA synthetase
BER93_01385	ENOG4105BZ6	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides (By similarity)
BER93_01390	ENOG4107URF	beta-phospho-glucomutase
BER93_01395	ENOG4105DSF	transport protein
BER93_01415	ENOG4105C0H	protease
BER93_01435	ENOG4105DHQ	Histidine kinase
BER93_01440	ENOG4105XJC	Two component transcriptional regulator (Winged helix family
BER93_01530	ENOG4105E0Y	RtcB Protein
BER93_01535	ENOG4105EJ2	Transcriptional regulator
BER93_01550	ENOG41066DG	(EAL) domain protein
BER93_01565	ENOG4105C0P	Mg chelatase subunit ChlI
BER93_01570	ENOG4105W0Z	cytoplasmic protein
BER93_01575	ENOG4108YZA	Nitrogen regulatory protein pii
BER93_01580	ENOG4105CPE	K01197 hyaluronoglucosaminidase EC 3.2.1.35
BER93_01600	ENOG4105CCX	Catalyzes the production of spermidine from putrescine and decarboxylated S-adenosylmethionine (dcSAM), which serves as an aminopropyl donor (By similarity)
BER93_01605	ENOG4105DP5	Catalyzes the biosynthesis of agmatine from arginine (By similarity)
BER93_01610	ENOG4105F2I	Transposase
BER93_01630	ENOG4105C2M	dna polymerase I
BER93_01635	ENOG4105DBS	Key enzyme in heme biosynthesis. Catalyzes the oxidative decarboxylation of propionic acid side chains of rings A and B of coproporphyrinogen III (By similarity)
BER93_01675	ENOG4105VNB	Carrier of the growing fatty acid chain in fatty acid biosynthesis (By similarity)
BER93_01685	ENOG4105E9Q	Acyl-transferase
BER93_01690	ENOG4108YXN	Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs (By similarity)
BER93_01720	ENOG4105C2D	reductase
BER93_01730	ENOG4106N3V	dolichyl-phosphate beta-D-mannosyltransferase (EC 2.4.1.83)
BER93_01740	ENOG4105C0Q	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP (By similarity)
BER93_01760	ENOG4105BZP	glycoside hydrolase 15-related
BER93_01765	ENOG4105D8W	glucose-6-phosphate 1-dehydrogenase
BER93_01770	ENOG4105CKD	glutathione-regulated potassium-efflux system protein
BER93_01775	ENOG4108UHE	carbonic anhydrase
BER93_01780	ENOG4105CJW	magnesium transporter
BER93_01785	ENOG4105CD5	CoA-binding domain protein
BER93_01795	ENOG4107QYD	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (By similarity)
BER93_01800	ENOG4105E05	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (By similarity)
BER93_01820	ENOG4108UT2	hemolysin iii
BER93_01825	ENOG4108I5C	dEAD DEAH box helicase
BER93_01865	ENOG4105BZS	acriflavin resistance protein
BER93_01940	ENOG4105RKW	reductase (By
BER93_01960	ENOG4105DMF	Dehydrogenase
BER93_01975	ENOG4105CGF	Aromatic amino acid aminotransferase
BER93_01980	ENOG4105CZI	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
BER93_02010	ENOG4105E09	nadh pyrophosphatase
BER93_02020	ENOG4105D4Y	metalloprotease
BER93_02050	ENOG4105CHU	acetyl-coa acetyltransferase
BER93_02080	ENOG4107YZP	Rhodanese domain protein
BER93_02085	ENOG4105IX2	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA (By similarity)
BER93_02090	ENOG4105CSF	NADPH-dependent glycerol-3-phosphate dehydrogenase
BER93_02100	ENOG4105C7K	acetolactate synthase
BER93_02110	ENOG4108UIQ	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide (By similarity)
BER93_02120	ENOG4105E2T	synthase III
BER93_02150	ENOG4105C2N	RNA methyltransferase TrmH family group 3
BER93_02160	ENOG4105C7V	phospho-2-dehydro-3-deoxyheptonate aldolase
BER93_02185	ENOG4107XH4	PPIases accelerate the folding of proteins (By similarity)
BER93_02190	ENOG4105D9Z	Catalyzes the reversible oxidation of malate to oxaloacetate (By similarity)
BER93_02215	ENOG4105F2I	Transposase
BER93_02225	ENOG4105CCY	NADH flavin oxidoreductase, NADH oxidase
BER93_02230	ENOG4105CIS	alcohol dehydrogenase
BER93_02235	ENOG4105CDV	Ompa motb domain protein
BER93_02245	ENOG4108R99	pseudouridine synthase
BER93_02255	ENOG4107EEK	Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide (By similarity)
BER93_02260	ENOG4105DE7	Sulfate ABC transporter periplasmic sulfate-binding protein
BER93_02265	ENOG4108I5D	sulfate abc transporter
BER93_02275	ENOG4108IJ6	ABC transporter
BER93_02285	ENOG4105CPQ	Dehydrogenase
BER93_02295	ENOG4105HSS	phospholipase C
BER93_02300	ENOG4105CVJ	phosphoglycerate mutase
BER93_02335	ENOG4105D9I	Responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6 (By similarity)
BER93_02345	ENOG4105ETX	regulatoR
BER93_02350	ENOG4105BZU	Histidine kinase
BER93_02375	ENOG4105C66	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate (By similarity)
BER93_02380	ENOG4108UTT	Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin (By similarity)
BER93_02385	ENOG4107YIM	Involved in the transcription termination process (By similarity)
BER93_02390	ENOG4105CG2	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 (By similarity)
BER93_02430	ENOG4105WHM	Necessary for normal cell division and for the maintenance of normal septation (By similarity)
BER93_02435	ENOG4106RE7	Cytochrome
BER93_02445	ENOG4108Z33	Thiol disulfide Interchange Protein
BER93_02495	ENOG4107QS8	(LipO)protein
BER93_02515	ENOG4105C85	amino acid
BER93_02525	ENOG4105D7N	magnesium and cobalt transport protein CorA
BER93_02570	ENOG4105BZU	Histidine kinase
BER93_02585	ENOG4106R7G	Glycoside hydrolase family 5
BER93_02590	ENOG4105CHH	sulfate transporter
BER93_02600	ENOG4105C3A	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) (By similarity)
BER93_02615	ENOG4108NEV	two component transcriptional regulator, LytTR family
BER93_02620	ENOG4105D6W	Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps (By similarity)
BER93_02670	ENOG4105E4Z	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan (By similarity)
BER93_02680	ENOG4108IYS	Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC-XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids (By similarity)
BER93_02685	ENOG4108R5P	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery (By similarity)
BER93_02690	ENOG4105C4N	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis (By similarity)
BER93_02715	ENOG4105DDZ	Methyltransferase required for the conversion of demethylmenaquinone (DMKH2) to menaquinone (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) (By similarity)
BER93_02720	ENOG4105BZU	Histidine kinase
BER93_02745	ENOG4105DFF	Rod shape-determining protein mreb
BER93_02750	ENOG4105N3I	Involved in formation and maintenance of cell shape (By similarity)
BER93_02765	ENOG4105CNI	cell division protein FtsW
BER93_02770	ENOG4107WN4	Polygalacturonase
BER93_02775	ENOG4105CVE	Lytic murein transglycosylase
BER93_02780	ENOG4105K6T	rare lipoprotein A
BER93_02785	ENOG4105DZ1	carboxypeptidase
BER93_02800	ENOG4108BDP	Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate (By similarity)
BER93_02805	ENOG4105C0G	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives (By similarity)
BER93_02830	ENOG4105CN1	protease
BER93_02875	ENOG4108J5G	6-phosphogluconate dehydrogenase
BER93_02880	ENOG4105D9R	oxidoreductase
BER93_02885	ENOG4105W4M	Transport-associated protein
BER93_02890	ENOG4105BZU	Histidine kinase
BER93_02900	ENOG4105BZU	Histidine kinase
BER93_02910	ENOG4105H9W	Short-chain dehydrogenase reductase Sdr
BER93_02950	ENOG4105J1P	transposase, IS3 IS911 family protein
BER93_02955	ENOG4105FDP	GntR family transcriptional regulator
BER93_02965	ENOG4105ETE	Transcriptional regulator (LacI family
BER93_02970	ENOG4105C46	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source (By similarity)
BER93_02975	ENOG4105CE4	GlcNAc 6-P deacetylase
BER93_02995	ENOG4108QBQ	Catalyzes the condensation of formaldehyde and glutathione to S-hydroxymethylglutathione (By similarity)
BER93_03025	ENOG41069H0	dihydroorotase EC 3.5.2.3
BER93_03105	ENOG4108JJA	ABC, transporter
BER93_03110	ENOG4105C42	Type I secretion membrane fusion protein (HlyD
BER93_03120	ENOG4107VZP	Hemolysin-type calcium-binding repeat 2 copies family protein
BER93_03130	ENOG4105E06	May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover (By similarity)
BER93_03140	ENOG4107QW3	Sucrose phosphorylase
BER93_03160	ENOG4105CHR	reductase
BER93_03165	ENOG4105D4T	Citrate transporter
BER93_03180	ENOG4105DHQ	Histidine kinase
BER93_03185	ENOG4106JDA	Phosphoglycerate transport regulatory protein PGTC
BER93_03190	ENOG4105WH1	Two component transcriptional regulator luxr family
BER93_03225	ENOG4105CQZ	Histidine kinase
BER93_03235	ENOG4105CK2	sodium dicarboxylate symporter
BER93_03240	ENOG4105C6K	Malic enzyme
BER93_03265	ENOG4105D1S	lipid A biosynthesis
BER93_03270	ENOG4105D8A	3-Deoxy-D-manno-octulosonic-acid transferase
BER93_03275	ENOG4105DFG	type I secretion outer membrane protein
BER93_03280	ENOG4105E26	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins (By similarity)
BER93_03290	ENOG4108MP6	LysR family Transcriptional regulator
BER93_03305	ENOG4105C0C	Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate (By similarity)
BER93_03310	ENOG4105D05	Receptor
BER93_03320	ENOG4105CYQ	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) (By similarity)
BER93_03325	ENOG4105C7B	Threonine dehydratase
BER93_03340	ENOG4105C6M	Alpha-keto-beta-hydroxylacyl reductoisomerase
BER93_03370	ENOG4105F2I	Transposase
BER93_03375	ENOG4105ECQ	AraC Family Transcriptional Regulator
BER93_03390	ENOG4105F0N	pyrophosphate phospho-hydrolase
BER93_03425	ENOG4105CC8	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism (By similarity)
BER93_03430	ENOG4105DFU	Cell wall formation (By similarity)
BER93_03445	ENOG410841Q	phosphoesterase PA-phosphatase related protein
BER93_03465	ENOG4105F2I	Transposase
BER93_03475	ENOG4105C8Y	Acetylornithine aminotransferase
BER93_03480	ENOG4105CDM	Glutamate-1-semialdehyde aminotransferase
BER93_03485	ENOG4108UV6	Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) (By similarity)
BER93_03490	ENOG4105VCQ	rubredoxin
BER93_03495	ENOG41063JG	Transcriptional regulator
BER93_03515	ENOG4105MK2	5-formyltetrahydrofolate cyclo-ligase
BER93_03525	ENOG4105W8B	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division (By similarity)
BER93_03540	ENOG4107RAQ	aminopeptidase
BER93_03545	ENOG4105D9Y	Splits dipeptides with a prolyl residue in the C- terminal position (By similarity)
BER93_03560	ENOG4105CSA	Coproporphyrinogen iii oxidase
BER93_03565	ENOG4108V82	Pyrophosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP dITP to their respective monophosphate derivatives. Might exclude non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions (By similarity)
BER93_03570	ENOG4105ED0	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates (By similarity)
BER93_03575	ENOG4105DSJ	YicC domain protein
BER93_03580	ENOG4108UHA	Essential for recycling GMP and indirectly, cGMP (By similarity)
BER93_03585	ENOG4105VFG	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits (By similarity)
BER93_03590	ENOG4105CWR	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance (By similarity)
BER93_03595	ENOG4105KME	endoribonuclease L-psp
BER93_03600	ENOG4105CB5	ATP-dependent DNA helicase recG
BER93_03615	ENOG4105NRA	50s ribosomal protein l31 type b
BER93_03620	ENOG4105BZN	citrate synthase
BER93_03630	ENOG4108JQC	penicillin-binding protein 1A
BER93_03655	ENOG4105E4G	Type IV pilus
BER93_03660	ENOG4105F2I	Transposase
BER93_03690	ENOG4105F2I	Transposase
BER93_03745	ENOG4106932	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic (By similarity)
BER93_03750	ENOG4105CJN	penicillin-binding protein
BER93_03755	ENOG4107EEN	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan (By similarity)
BER93_03760	ENOG4108EQQ	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein (By similarity)
BER93_03765	ENOG4105CPY	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan (By similarity)
BER93_03780	ENOG4105DFU	Cell wall formation (By similarity)
BER93_03785	ENOG4105CPF	Cell wall formation (By similarity)
BER93_03790	ENOG4105K7E	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly (By similarity)
BER93_03795	ENOG4105CIT	This protein may be involved in anomalous filament growth. May be a component of the septum (By similarity)
BER93_03800	ENOG4105CDK	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity (By similarity)
BER93_03805	ENOG4105C7C	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell (By similarity)
BER93_03815	ENOG4105DR5	peptidase
BER93_03820	ENOG4105CI6	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving
BER93_03830	ENOG4105M6F	mutator MutT protein
BER93_03840	ENOG4105SYT	Methylenetetrahydrofolate reductase
BER93_03885	ENOG4108ZQD	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A (By similarity)
BER93_03890	ENOG4105EHH	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue (By similarity)
BER93_03895	ENOG4105D7Q	type ii secretion system
BER93_03905	ENOG4107QHF	type ii secretion system protein e
BER93_03920	ENOG4105MZU	cell filamentation protein
BER93_03925	ENOG4105C1W	two component, sigma54 specific, transcriptional regulator, Fis family
BER93_03930	ENOG4107TUY	Histidine kinase
BER93_03935	ENOG4105CMV	Succinyl-CoA synthetase subunit beta
BER93_03940	ENOG4105CH8	Succinyl-CoA ligase ADP-forming subunit alpha
BER93_03945	ENOG4105C4K	Nad synthetase
BER93_03950	ENOG4106SNF	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BER93_03955	ENOG4105C34	Pseudouridine synthase
BER93_03985	ENOG4105C1K	alpha-alpha-trehalose-phosphate synthase
BER93_03990	ENOG4105BZP	glycoside hydrolase 15-related
BER93_03995	ENOG4108K4C	ec 3.1.3.12
BER93_04000	ENOG4105CHI	Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans-periplasmic membrane protein TonB (By similarity)
BER93_04030	ENOG41082IR	Excinuclease ABC C subunit domain protein
BER93_04055	ENOG4105FD2	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) (By similarity)
BER93_04085	ENOG4105C9U	ATP-dependent DNA helicase RecQ
BER93_04095	ENOG4105CQ7	ATP-dependent helicase
BER93_04100	ENOG4105EZY	Pyrroloquinoline quinone biosynthesis protein E
BER93_04115	ENOG4105JIE	May be involved in the transport of PQQ or its precursor to the periplasm (By similarity)
BER93_04120	ENOG4105CWR	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance (By similarity)
BER93_04135	ENOG4105BZ4	penicillin-binding protein
BER93_04145	ENOG4105DVT	helicase
BER93_04150	ENOG41072GX	Peptidase M22 Glycoprotease
BER93_04160	ENOG4105D7Z	glutathione synthase
BER93_04165	ENOG4108UNF	response regulator
BER93_04170	ENOG4105M3Z	response regulator
BER93_04175	ENOG410807Z	Modulation of CheA activity in response to attractants (Chemotaxis
BER93_04180	ENOG4105C8Q	Methyl-accepting chemotaxis
BER93_04185	ENOG4105CBS	Chea signal transduction histidine kinase
BER93_04200	ENOG4105D9U	N-acetyltransferase
BER93_04215	ENOG4106N3A	copper homeostasis protein cutc
BER93_04245	ENOG4105CS6	Rhs element vgr protein
BER93_04290	ENOG4105CA4	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner (By similarity)
BER93_04300	ENOG4105BZ6	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides (By similarity)
BER93_04310	ENOG4108K5H	permease YjgP YjgQ family protein
BER93_04325	ENOG4105C13	Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC-XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids (By similarity)
BER93_04330	ENOG4105T95	Thiol disulfide interChange protein
BER93_04335	ENOG4108ETH	Formylglycinamide ribotide synthetase
BER93_04345	ENOG4105EUR	Domain-Containing protein
BER93_04350	ENOG4105RX7	peptidase S8 and S53, subtilisin, kexin, sedolisin
BER93_04355	ENOG4107QHF	type ii secretion system protein e
BER93_04360	ENOG4105D7Q	type ii secretion system
BER93_04370	ENOG4105WMT	general secretion pathway protein h
BER93_04380	ENOG41069G9	General secretion pathway protein J
BER93_04385	ENOG4105UV2	general secretion pathway protein K
BER93_04390	ENOG41090VX	general secretion pathway protein L
BER93_04395	ENOG410678M	general secretion pathway protein M
BER93_04405	ENOG4105GVR	general secretion pathway protein D
BER93_04415	ENOG4106S9K	Transcriptional regulator
BER93_04445	ENOG4107RH7	Nicotinate phosphoribosyltransferase
BER93_04465	ENOG4108RBJ	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions (By similarity)
BER93_04470	ENOG4105C5H	ABC transporter
BER93_04480	ENOG4105C65	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism (By similarity)
BER93_04485	ENOG4108Z11	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes (By similarity)
BER93_04495	ENOG4105D1W	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate (By similarity)
BER93_04515	ENOG4105F2I	Transposase
BER93_04555	ENOG4105C3E	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine (By similarity)
BER93_04565	ENOG4105CCA	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle (By similarity)
BER93_04585	ENOG4105CPH	Catalyzes the formation of S-adenosylmethionine from methionine and ATP
BER93_04595	ENOG4107R6G	Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate (By similarity)
BER93_04600	ENOG4105CEH	Catalyzes the synthesis of dihydrouridine a modified base found in the D-loop of most tRNAs (By similarity)
BER93_04615	ENOG41080IJ	Diacylglycerol kinase
BER93_04625	ENOG4105DHQ	Histidine kinase
BER93_04630	ENOG4105ETX	regulatoR
BER93_04635	ENOG4108UJV	acyl-CoA thioesterase i
BER93_04640	ENOG4108I0Y	(ABC) transporter
BER93_04680	ENOG4105CPC	Aldo Keto reductase
BER93_04685	ENOG4105D9N	nucleoside
BER93_04705	ENOG4105C3B	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins (By similarity)
BER93_04730	ENOG4105NWN	ApaG protein
BER93_04735	ENOG4105D1X	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (By similarity)
BER93_04740	ENOG4105CEZ	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) (By similarity)
BER93_04745	ENOG4105DBD	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation (By similarity)
BER93_04750	ENOG4105E7H	involved in the assembly of LPS in the outer leaflet of the outer membrane. Determines N-hexane tolerance and is involved in outer membrane permeability. Essential for envelope biogenesis (By similarity)
BER93_04760	ENOG4108WBT	adenosyltransferase
BER93_04770	ENOG4105D0A	hydroxylase
BER93_04775	ENOG4105EAK	ubiquinone biosynthesis hydroxylase, ubiH ubiF VisC COQ6 family
BER93_04790	ENOG4105DDW	LysR family Transcriptional regulator
BER93_04800	ENOG4108D7R	p-hydroxycinnamoyl CoA hydratase lyase
BER93_04835	ENOG4105CX6	glutaminyL-tRNA synthetase
BER93_04855	ENOG4105WH1	Two component transcriptional regulator luxr family
BER93_04860	ENOG4107QXP	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine (By similarity)
BER93_04865	ENOG4105CW3	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway (By similarity)
BER93_04870	ENOG4105NXH	GreA GreB family elongation factor
BER93_04875	ENOG4105C5Q	Transcriptional regulator
BER93_04890	ENOG4105EQY	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif (By similarity)
BER93_04915	ENOG4105C2M	dna polymerase I
BER93_04955	ENOG4105CM2	brancheD-chain amino acid aminotransferase
BER93_04970	ENOG4105RX7	peptidase S8 and S53, subtilisin, kexin, sedolisin
BER93_04975	ENOG4108Z66	YbaK ebsC protein
BER93_04990	ENOG4105CS1	NAD(P)H quinone oxidoreductase
BER93_04995	ENOG4107S2Z	UPF0761 membrane protein
BER93_05000	ENOG4107QX9	Thiol disulfide interChange protein
BER93_05010	ENOG4105CSR	polyphosphate kinase 2
BER93_05015	ENOG4108RIR	Molybdenum cofactor biosynthesis protein
BER93_05035	ENOG4105DJQ	tetratricopeptide tpr_2 repeat protein
BER93_05040	ENOG4105QVB	outer membrane lipoprotein LolB
BER93_05045	ENOG4105CTR	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol (By similarity)
BER93_05055	ENOG4105C5T	Phosphoribosyl pyrophosphate synthase
BER93_05060	ENOG4105KW6	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance (By similarity)
BER93_05065	ENOG4108ZPD	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis (By similarity)
BER93_05070	ENOG4105C3G	gtp-binding protein
BER93_05090	ENOG4105CGV	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (By similarity)
BER93_05100	ENOG4105PM1	preprotein translocase subunit SecE
BER93_05105	ENOG4105E5V	Participates in transcription elongation, termination and antitermination (By similarity)
BER93_05110	ENOG4108UIK	This protein binds directly to 23S ribosomal RNA (By similarity)
BER93_05115	ENOG4105C64	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release (By similarity)
BER93_05120	ENOG4108VZM	50s ribosomal protein L10
BER93_05125	ENOG4105KBC	Seems to be the binding site for several of the factors involved in protein synthesis and appears to be essential for accurate translation (By similarity)
BER93_05135	ENOG4105D27	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity)
BER93_05140	ENOG4108UKE	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit (By similarity)
BER93_05145	ENOG4108UHY	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA (By similarity)
BER93_05155	ENOG4105CGV	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (By similarity)
BER93_05160	ENOG4108Z10	Involved in the binding of tRNA to the ribosomes (By similarity)
BER93_05165	ENOG4105EEE	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (By similarity)
BER93_05170	ENOG4106U5A	One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity)
BER93_05175	ENOG41080KG	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome (By similarity)
BER93_05180	ENOG4105CFD	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
BER93_05185	ENOG4105K7S	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA (By similarity)
BER93_05195	ENOG4105CKE	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation (By similarity)
BER93_05200	ENOG4108R70	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs (By similarity)
BER93_05210	ENOG4105K87	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal
BER93_05215	ENOG4108UNN	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome (By similarity)
BER93_05220	ENOG4105KAR	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit (By similarity)
BER93_05225	ENOG4105CW6	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
BER93_05230	ENOG4105VBI	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site (By similarity)
BER93_05240	ENOG4108R5J	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center (By similarity)
BER93_05250	ENOG4108RA9	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body (By similarity)
BER93_05260	ENOG4108UZ0	Binds to the 23S rRNA (By similarity)
BER93_05265	ENOG4105CGG	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently (By similarity)
BER93_05270	ENOG4108Z04	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
BER93_05275	ENOG4108UHH	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome (By similarity)
BER93_05280	ENOG4105G6W	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit (By similarity)
BER93_05285	ENOG4105CTF	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity)
BER93_05290	ENOG4108ZT0	50S ribosomal protein l17
BER93_05295	ENOG41080I0	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein (By similarity)
BER93_05315	ENOG4105EBR	Carboxylesterase
BER93_05340	ENOG4105M2E	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell (By similarity)
BER93_05360	ENOG4105CZ1	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA (By similarity)
BER93_05365	ENOG4105CA8	Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S (By similarity)
BER93_05385	ENOG4105DFP	Integrase
BER93_05615	ENOG4108MHR	Repressor involved in choline regulation of the bet genes (By similarity)
BER93_05620	ENOG4105CVJ	phosphoglycerate mutase
BER93_05625	ENOG4107Z4K	Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration (By similarity)
BER93_05645	ENOG4105CYX	Short-chain dehydrogenase reductase Sdr
BER93_05675	ENOG4105QF0	Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit (By similarity)
BER93_05685	ENOG4107RK2	ADP-ribose diphosphatase NudE
BER93_05690	ENOG4108RNI	3'(2')5'-bisphosphate nucleotidase
BER93_05695	ENOG4105DXN	mazG family
BER93_05700	ENOG4105D43	The glycine cleavage system catalyzes the degradation of glycine (By similarity)
BER93_05730	ENOG4107QPN	acyl-Coa dehydrogenase
BER93_05740	ENOG4108IG5	Transcriptional regulator
BER93_05785	ENOG4105F4C	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress (By similarity)
BER93_05790	ENOG4108VKV	Monofunctional biosynthetic peptidoglycan transglycosylase
BER93_05800	ENOG4105CP4	Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth (By similarity)
BER93_05805	ENOG41066T0	asmA family
BER93_05810	ENOG4108UT2	hemolysin iii
BER93_05815	ENOG4105C8A	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP (By similarity)
BER93_05830	ENOG4106TYC	homoserine o-acetyltransferase (EC 2.3.1.31)
BER93_05835	ENOG4105C28	cystathionine
BER93_05840	ENOG4105CFH	Aspartokinase
BER93_05855	ENOG4105C28	cystathionine
BER93_05880	ENOG4108YYC	ycei family
BER93_05885	ENOG4105BZU	Histidine kinase
BER93_05900	ENOG4105ENN	converts alpha-aldose to the beta-anomer. It is active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose (By similarity)
BER93_05905	ENOG4105CRE	cytochrome C
BER93_05910	ENOG4105CB9	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BER93_05920	ENOG4107QWG	2-Nitropropane dioxygenase
BER93_05930	ENOG4105K5M	30s ribosomal protein S16
BER93_05935	ENOG4108ZR6	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes (By similarity)
BER93_05940	ENOG4105D6X	Specifically methylates guanosine-37 in various tRNAs (By similarity)
BER93_05945	ENOG4108YY1	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site (By similarity)
BER93_05950	ENOG4107QJQ	Mate efflux family protein
BER93_05955	ENOG4105VEJ	Heat shock protein
BER93_05985	ENOG4105BZU	Histidine kinase
BER93_06000	ENOG4105C22	threonyL-tRNA synthetase
BER93_06005	ENOG4108UUX	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins (By similarity)
BER93_06010	ENOG41082NX	50s ribosomal protein l35
BER93_06015	ENOG4108YZX	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (By similarity)
BER93_06020	ENOG4105CSS	phenylalanyl-tRNA synthetase (alpha subunit)
BER93_06030	ENOG4108ZUF	This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control (By similarity)
BER93_06035	ENOG4105WJX	transcriptional regulator MERR family
BER93_06055	ENOG4105D3Q	Sugar transferase
BER93_06080	ENOG4107Y2G	Glycosyl transferase (Group 1
BER93_06090	ENOG4108NQK	Catalyzes the transfer of a glucuronic acid (GlcA) residue from UDP-glucuronate to mannose-alpha-1,3-glucose-beta- 1,4-glucose-P-P-polyisoprenyl to form the lipid-linked tetrasaccharide GlcA-Man-Glc(2)-PP-Pol, with a glucuronic acid- beta-mannose linkage. Is involved in the biosynthesis of the exopolysaccharide xanthan, since it catalyzes the fourth glycosylation step in the assembly of the pentasaccharide-P-P- polyisoprenyl repeating unit of xanthan. Is unable to use the trisaccharide acceptor freed from the pyrophosphate lipid moiety. Does not show specificity for the lipidic portion of the acceptor. Shows diminished activity when tested with 6-O-acetyl-mannose- alpha-1,3-glucose-beta-1,4-glucose-P-P-polyisoprenyl, a
BER93_06110	ENOG4105C2V	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) (By similarity)
BER93_06125	ENOG4105CSU	acyl-Coa dehydrogenase
BER93_06135	ENOG4105QNF	Outer membrane lipoprotein
BER93_06155	ENOG4105DKD	Incises the DNA at the 3' side of a lesion during nucleotide excision repair. Incises the DNA farther away from the lesion than UvrC. Not able to incise the 5' site of a lesion. When a lesion remains because UvrC is not able to induce the 3' incision, Cho incises the DNA. Then UvrC makes the 5' incision. The combined action of Cho and UvrC broadens the substrate range of nucleotide excision repair (By similarity)
BER93_06170	ENOG4108MIC	Mg-protoporphyrin IX methyl transferase
BER93_06195	ENOG4105CEN	a g-specific adenine glycosylase
BER93_06200	ENOG4105CCP	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
BER93_06210	ENOG4105CTU	Proline racemase
BER93_06215	ENOG41080HI	glycine oxidase
BER93_06230	ENOG4105CDP	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) (By similarity)
BER93_06240	ENOG4105DC7	peptidase M24
BER93_06255	ENOG4107QTZ	amino acid
BER93_06280	ENOG4105F2I	Transposase
BER93_06300	ENOG4105CHI	Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans-periplasmic membrane protein TonB (By similarity)
BER93_06360	ENOG4108YXA	Membrane
BER93_06365	ENOG4107QM9	Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA (By similarity)
BER93_06380	ENOG4105D0V	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell (By similarity)
BER93_06385	ENOG4105DAF	Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell (By similarity)
BER93_06390	ENOG4108YXN	Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs (By similarity)
BER93_06395	ENOG4105D7M	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell (By similarity)
BER93_06410	ENOG4105DZP	Membrane-associated zinc metalloprotease
BER93_06415	ENOG4105CEA	Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) (By similarity)
BER93_06420	ENOG4105KNE	Phosphatidate cytidylyltransferase
BER93_06425	ENOG4105CR3	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids (By similarity)
BER93_06435	ENOG4105C41	Catalyzes the reversible phosphorylation of UMP to UDP (By similarity)
BER93_06445	ENOG4105CU7	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (By similarity)
BER93_06485	ENOG4105CA1	Removes the N-terminal methionine from nascent proteins (By similarity)
BER93_06490	ENOG4105E1P	Modifies, by uridylylation or deuridylylation the PII (GlnB) regulatory protein (By similarity)
BER93_06500	ENOG4105KUZ	arsenate reductase
BER93_06505	ENOG4105C9Y	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls (By similarity)
BER93_06510	ENOG4105CAQ	asparagine synthetase
BER93_06520	ENOG4108ESX	Receptor
BER93_06535	ENOG4108UWD	Iron-storage protein
BER93_06540	ENOG4105FQ6	thiopurine methyltransferase
BER93_06545	ENOG4105C24	DNA gyrase negatively supercoils closed circular double- stranded DNA in an ATP-dependent manner and also catalyzes the interconversion of other topological isomers of double-stranded DNA rings, including catenanes and knotted rings (By similarity)
BER93_06560	ENOG4105CW7	secretion protein, HlyD family
BER93_06565	ENOG4105C0R	drug resistance transporter emrb qaca subfamily
BER93_06580	ENOG4105DUX	Transporter
BER93_06625	ENOG4105DP0	ferredoxin-NADP reductase
BER93_06635	ENOG4107GFK	fumarate
BER93_06660	ENOG4105VEQ	Cold shock protein
BER93_06675	ENOG4105CUZ	uba thif-type nad fad binding protein
BER93_06680	ENOG4105F8V	Hydrolase, tatD family
BER93_06700	ENOG4108K3A	Glutathione S-transferase
BER93_06705	ENOG4105CAQ	asparagine synthetase
BER93_06715	ENOG4105CDU	Replicative dna helicase
BER93_06720	ENOG4105CVP	deoxyribo-dipyrimidine photolyase
BER93_06725	ENOG4105CDV	Ompa motb domain protein
BER93_06765	ENOG4105C26	Dehydrogenase
BER93_06770	ENOG4105C1G	acyl-Coa dehydrogenase
BER93_06775	ENOG4105E39	Enoyl-CoA hydratase
BER93_06780	ENOG4105DYT	3-hydroxyacyl-CoA dehydrogenase
BER93_06785	ENOG4105CF3	3-Hydroxyisobutyrate dehydrogenase
BER93_06800	ENOG4105EMN	RNA polymerase sigma factor
BER93_06810	ENOG4105C0H	protease
BER93_06820	ENOG4105F2I	Transposase
BER93_06855	ENOG4108JU5	Magnesium and cobalt efflux protein
BER93_06865	ENOG4105KGE	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA (By similarity)
BER93_06870	ENOG4105C9A	Phoh family
BER93_06885	ENOG4105E4C	Lytic transglycosylase catalytic
BER93_06890	ENOG4108R5F	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (By similarity)
BER93_06895	ENOG4105DJ5	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (By similarity)
BER93_06900	ENOG4105EIX	cytochrome c1
BER93_06905	ENOG4107MKT	Stringent starvation protein a
BER93_06910	ENOG4105KB2	stringent starvation protein b
BER93_06920	ENOG4107QRT	dEAD DEAH box helicase
BER93_06925	ENOG4108VX5	3-methyladenine DNA glycosylase
BER93_06960	ENOG4105E6M	Sulphatase-modifying factor protein
BER93_06980	ENOG4105C3F	Signal peptidase i
BER93_06990	ENOG4108ZBM	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Also processes some mRNAs, and tRNAs when they are encoded in the rRNA operon (By similarity)
BER93_07015	ENOG41080ZE	Adenylate cyclase
BER93_07020	ENOG4108QDE	fad dependent oxidoreductase
BER93_07025	ENOG4105EXX	Deoxyribodipyrimidine photolyase-related protein
BER93_07030	ENOG4107QPA	Cleaves GlcNAc linked beta-1,4 to MurNAc tripeptides (By similarity)
BER93_07035	ENOG4108UGV	hypoxanthine phosphoribosyltransferase
BER93_07040	ENOG4107RHB	Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates (By similarity)
BER93_07045	ENOG4105VEQ	Cold shock protein
BER93_07055	ENOG4107QRT	dEAD DEAH box helicase
BER93_07060	ENOG4107T0X	DNA ligase
BER93_07070	ENOG4107T0X	DNA ligase
BER93_07100	ENOG4105CHU	acetyl-coa acetyltransferase
BER93_07105	ENOG4105F2I	Transposase
BER93_07120	ENOG4108VKG	metal-dependent hydrolase
BER93_07140	ENOG4105D7A	ATP-binding protein
BER93_07165	ENOG4108ZGB	N-(5'-phosphoribosyl)anthranilate isomerase
BER93_07180	ENOG4105F2I	Transposase
BER93_07210	ENOG4107QJF	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate (By similarity)
BER93_07225	ENOG4105BZU	Histidine kinase
BER93_07240	ENOG4105EMU	Dehydrogenase
BER93_07245	ENOG4105CP7	Triose-phosphate isomerase
BER93_07260	ENOG4105KWU	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
BER93_07265	ENOG4105ES3	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (By similarity)
BER93_07270	ENOG4105CYU	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
BER93_07275	ENOG4105CQV	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (By similarity)
BER93_07280	ENOG4105GKE	subunit e
BER93_07285	ENOG4107QIZ	NADH dehydrogenase
BER93_07290	ENOG4108IEH	NADH dehydrogenase subunit g
BER93_07295	ENOG4105CMZ	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone (By similarity)
BER93_07300	ENOG4105P3U	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (By similarity)
BER93_07305	ENOG4105DF2	NADH dehydrogenase subunit j
BER93_07320	ENOG4105C8S	subunit m
BER93_07325	ENOG4105CNR	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (By similarity)
BER93_07335	ENOG4105K7D	Required for maturation of 30S ribosomal subunits (By similarity)
BER93_07340	ENOG4105CHV	Transcription elongation factor NusA
BER93_07345	ENOG4107QHU	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (By similarity)
BER93_07350	ENOG4105KG7	Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Essential for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA (By similarity)
BER93_07355	ENOG4105D0T	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (By similarity)
BER93_07360	ENOG4105K77	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome (By similarity)
BER93_07365	ENOG4105C62	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3'- to 5'-direction (By similarity)
BER93_07385	ENOG4105D18	nicotinate-nucleotide pyrophosphorylase
BER93_07395	ENOG4108UM6	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) (By similarity)
BER93_07400	ENOG4105CY8	phosphoribosylaminoimidazole carboxylase atpase subunit
BER93_07405	ENOG4105CK4	Destroys radicals which are normally produced within the cells and which are toxic to biological systems (By similarity)
BER93_07410	ENOG4105M2J	Glutaredoxin
BER93_07420	ENOG41076UM	multiple antibiotic resistance (MarC)-related protein
BER93_07425	ENOG4108KPZ	tonB-dependent Receptor
BER93_07430	ENOG4105EWT	decarboxylase family
BER93_07440	ENOG4108HRK	Histidine kinase
BER93_07460	ENOG4105DW3	Response regulator receiver modulated metal dependent phosphohydrolase
BER93_07465	ENOG4105BZU	Histidine kinase
BER93_07470	ENOG4106BRA	Membrane
BER93_07475	ENOG4105FDK	ABC transporter
BER93_07485	ENOG4105FCD	Major Facilitator
BER93_07490	ENOG4107H9G	Necessary for formate dehydrogenase activity (By similarity)
BER93_07495	ENOG4107QKC	Oxidoreductase alpha (molybdopterin) subunit
BER93_07525	ENOG4105CJP	fad dependent oxidoreductase
BER93_07530	ENOG4105CFQ	glutamine synthetase
BER93_07560	ENOG4105C53	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system (By similarity)
BER93_07565	ENOG4105F38	ABC transporter, permease
BER93_07570	ENOG4105D38	putrescine abc transporter
BER93_07585	ENOG410903D	sensor protein
BER93_07595	ENOG4105BZS	acriflavin resistance protein
BER93_07600	ENOG4105C1P	efflux transporter, rnd family, mfp subunit
BER93_07610	ENOG4105C7I	Dehydrogenase
BER93_07655	ENOG4105X54	addiction module antidote protein
BER93_07680	ENOG4105C4M	(Ubiquinol oxidase) subunit I
BER93_07690	ENOG4105F2I	Transposase
BER93_07715	ENOG4105CCW	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage (By similarity)
BER93_07745	ENOG4105CMA	conjugation trbi family protein
BER93_07875	ENOG4105F2I	Transposase
BER93_07960	ENOG4108UH4	Binds specifically to the SsrA RNA (tmRNA) and is required for stable association of SsrA with ribosomes (By similarity)
BER93_07975	ENOG4105YRI	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (By similarity)
BER93_07980	ENOG41090R7	Ferric uptake
BER93_07985	ENOG4105C4F	May be involved in recombinational repair of damaged DNA (By similarity)
BER93_07990	ENOG4105CI8	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons (By similarity)
BER93_07995	ENOG4105K90	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
BER93_08000	ENOG4105CFG	Acts as a chaperone (By similarity)
BER93_08005	ENOG4105BZ5	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)
BER93_08035	ENOG4108JJA	ABC, transporter
BER93_08050	ENOG4105BZ1	(ABC) transporter
BER93_08060	ENOG4108URH	decarboxylase
BER93_08070	ENOG4105C7S	Dehydrogenase
BER93_08075	ENOG4105C7P	2-oxoglutarate dehydrogenase, E1
BER93_08085	ENOG4105EZE	Cupin 4 family protein
BER93_08090	ENOG4107QTF	adenylosuccinate lyase
BER93_08120	ENOG4105F2I	Transposase
BER93_08145	ENOG4105CZV	ABC transporter
BER93_08150	ENOG410811P	TRANSCRIPTIONAl REGULATOR GntR family
BER93_08165	ENOG4108V1T	peptidylprolyl cis-trans isomerase
BER93_08170	ENOG4105C6Y	Udp-glucose 6-dehydrogenase
BER93_08190	ENOG4105ETE	Transcriptional regulator (LacI family
BER93_08210	ENOG4105C3R	Methionine synthase
BER93_08215	ENOG4105C3R	Methionine synthase
BER93_08225	ENOG4105C1G	acyl-Coa dehydrogenase
BER93_08240	ENOG4105C40	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs (By similarity)
BER93_08245	ENOG4105C2N	RNA methyltransferase TrmH family group 3
BER93_08255	ENOG4105DH5	Responsible for the end-turnover of tRNA specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis (By similarity)
BER93_08260	ENOG4108UTW	Plays a role in the regulation of phosphate uptake
BER93_08265	ENOG4105BZY	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system (By similarity)
BER93_08270	ENOG4105E2Z	phosphate ABC transporter (Permease
BER93_08275	ENOG4105C8U	phosphate abc transporter
BER93_08280	ENOG4107QMV	Part of the ABC transporter complex PstSACB involved in phosphate import (By similarity)
BER93_08310	ENOG4107B2H	carbonic anhydrase
BER93_08315	ENOG4105CHH	sulfate transporter
BER93_08320	ENOG4105CSM	endonuclease III
BER93_08335	ENOG4108V1T	peptidylprolyl cis-trans isomerase
BER93_08340	ENOG4105P8F	nudix hydrolase
BER93_08345	ENOG4105KHC	sulfurtransferase
BER93_08380	ENOG4105C4H	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA (By similarity)
BER93_08385	ENOG4105F91	Catalyzes the phosphorylation of NAD to NADP. Utilizes ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus (By similarity)
BER93_08395	ENOG4105F2I	Transposase
BER93_08410	ENOG4105CJB	Exodeoxyribonuclease I
BER93_08415	ENOG4107RQD	Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid (By similarity)
BER93_08420	ENOG4105CKY	Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively (By similarity)
BER93_08430	ENOG4105C3W	Catalyzes the oxidative ring opening of 3- hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate (By similarity)
BER93_08435	ENOG41077A9	carbonic anhydrase
BER93_08460	ENOG4105C5S	asparaginyl-tRNA synthetase
BER93_08465	ENOG4108YX9	iron--sulfur cluster insertion protein erpA
BER93_08470	ENOG4108ZDX	Binds together with S18 to 16S ribosomal RNA (By similarity)
BER93_08475	ENOG4105VH8	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit (By similarity)
BER93_08480	ENOG4105K9Q	Binds to the 23S rRNA (By similarity)
BER93_08490	ENOG4107NPY	receptor for the septal ring structure, may anchor it to the inner-membrane (By similarity)
BER93_08495	ENOG4105C77	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA (By similarity)
BER93_08500	ENOG4105CAP	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P (By similarity)
BER93_08515	ENOG4105C35	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P) (By similarity)
BER93_08520	ENOG4105C24	DNA gyrase negatively supercoils closed circular double- stranded DNA in an ATP-dependent manner and also catalyzes the interconversion of other topological isomers of double-stranded DNA rings, including catenanes and knotted rings (By similarity)
BER93_08535	ENOG4105CGP	Urocanate hydratase
BER93_08545	ENOG4105C84	Histidine ammonia-lyase
BER93_08580	ENOG4105DQ2	Is probably involved in the electron transfer between its heme and the molybdenum cofactor of the reductase catalytic subunit YedY (By similarity)
BER93_08595	ENOG4105C76	Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue (By similarity)
BER93_08605	ENOG4105D10	5-enolpyruvylshikimate-3-phosphate phospholyase
BER93_08610	ENOG4105C5I	Dehydrogenase
BER93_08615	ENOG4105CM3	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate (By similarity)
BER93_08625	ENOG4105C8Q	Methyl-accepting chemotaxis
BER93_08660	ENOG4105KWW	Biogenesis protein
BER93_08665	ENOG4105DA4	cytochrome c-type biogenesis protein
BER93_08685	ENOG4105EMN	RNA polymerase sigma factor
BER93_08710	ENOG4107QNK	)-transporter
BER93_08715	ENOG4105DEN	Luciferase family
BER93_08740	ENOG4107S90	membrAne
BER93_08750	ENOG4105C7D	DNA gyrase negatively supercoils closed circular double- stranded DNA in an ATP-dependent manner and also catalyzes the interconversion of other topological isomers of double-stranded DNA rings, including catenanes and knotted rings (By similarity)
BER93_08760	ENOG4105C8D	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen (By similarity)
BER93_08765	ENOG4105CXR	Phospho-2-dehydro-3-deoxyoctonate aldolase
BER93_08770	ENOG4105C70	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis (By similarity)
BER93_08775	ENOG4105XX3	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic (By similarity)
BER93_08780	ENOG4105CE5	Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) (By similarity)
BER93_08795	ENOG4108DG9	Smr protein MutS2
BER93_08800	ENOG4105CV2	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates (By similarity)
BER93_08805	ENOG4105E26	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins (By similarity)
BER93_08810	ENOG4108UM1	dedA family
BER93_08815	ENOG4108K5P	(LipO)protein
BER93_08855	ENOG4105DWV	Homoserine O-trans-acetylase
BER93_08865	ENOG4108M1T	Cytochrome c-type biogenesis protein
BER93_08870	ENOG4105KWW	Biogenesis protein
BER93_08880	ENOG4105DA4	cytochrome c-type biogenesis protein
BER93_08885	ENOG4108ZKK	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH (By similarity)
BER93_08895	ENOG41060IM	Heme exporter protein
BER93_08900	ENOG4105CA5	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes (By similarity)
BER93_08905	ENOG4107EV4	once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system (By similarity)
BER93_08910	ENOG4105CHM	Aminotransferase
BER93_08930	ENOG4105FE9	pseudouridine synthase
BER93_08935	ENOG4105K8I	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves (By similarity)
BER93_08940	ENOG4108KVX	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves (By similarity)
BER93_08945	ENOG4105K9H	YciI-like protein
BER93_08975	ENOG4105F0P	binding-protein-dependent transport systems inner membrane Component
BER93_08980	ENOG4105DRS	transport system, permease
BER93_09015	ENOG4105DWY	Agmatine deiminase
BER93_09030	ENOG4105CAV	thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence (By similarity)
BER93_09035	ENOG41080YA	This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control (By similarity)
BER93_09045	ENOG4105CFV	Tetratricopeptide repeat protein
BER93_09050	ENOG4105ESV	Glycosyl transferase, family 4
BER93_09060	ENOG4105C3Y	UTP-glucose-1-phosphate uridylyltransferase
BER93_09100	ENOG4105CN0	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate (By similarity)
BER93_09105	ENOG4105CP4	Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth (By similarity)
BER93_09110	ENOG4105CM0	Catalyzes the synthesis of GMP from XMP (By similarity)
BER93_09210	ENOG4105CUT	histidyl-tRNA synthetase
BER93_09220	ENOG4105E21	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity (By similarity)
BER93_09225	ENOG4105CEK	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine (By similarity)
BER93_09230	ENOG4105CIH	Imidazole acetol-phosphate transaminase
BER93_09240	ENOG4108UJE	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR (By similarity)
BER93_09245	ENOG4105CJV	Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
BER93_09250	ENOG4105C0S	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit (By similarity)
BER93_09255	ENOG4105K8F	Phosphoribosyl-amp cyclohydrolase
BER93_09280	ENOG4106YVY	Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) (By similarity)
BER93_09285	ENOG4108CAF	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway (By similarity)
BER93_09290	ENOG4107QY0	Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P) (By similarity)
BER93_09295	ENOG4105CUB	amino acid
BER93_09300	ENOG4105CUB	amino acid
BER93_09310	ENOG4108JQ1	Dehydrogenase
BER93_09315	ENOG4105CQB	FAD linked oxidase domain protein
BER93_09330	ENOG4105FUQ	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase (By similarity)
BER93_09340	ENOG4105CBH	Hydroxymethylglutaryl-CoA lyase
BER93_09345	ENOG4105E39	Enoyl-CoA hydratase
BER93_09355	ENOG4105CE1	Ferrous iron transport protein b
BER93_09370	ENOG4105DUK	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate (By similarity)
BER93_09375	ENOG4105C1M	carbamoyl-phosphate synthetase glutamine chain
BER93_09390	ENOG4105CU6	carbamoyl-phosphate synthetase ammonia chain
BER93_09395	ENOG4108UKH	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides (By similarity)
BER93_09405	ENOG4105C2R	Single-stranded-DNA-specific exonuclease (RecJ)
BER93_09410	ENOG4105CG1	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA (By similarity)
BER93_09415	ENOG4105CRK	lysyL-tRNA synthetase
BER93_09420	ENOG4105DW3	Response regulator receiver modulated metal dependent phosphohydrolase
BER93_09430	ENOG4105BZU	Histidine kinase
BER93_09435	ENOG4105E39	Enoyl-CoA hydratase
BER93_09440	ENOG4105CEY	Amp-dependent synthetase and ligase
BER93_09450	ENOG4107QM5	aconitate hydratase
BER93_09465	ENOG4107QIJ	Aconitate hydratase 2
BER93_09470	ENOG41074FZ	May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation (By similarity)
BER93_09475	ENOG4105BZU	Histidine kinase
BER93_09480	ENOG4105CMP	catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR (By similarity)
BER93_09485	ENOG4108Z4W	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis (By similarity)
BER93_09490	ENOG4105BZU	Histidine kinase
BER93_09500	ENOG4108V3W	Chemotaxis protein, CheW
BER93_09510	ENOG4105C8Q	Methyl-accepting chemotaxis
BER93_09520	ENOG4105C8Q	Methyl-accepting chemotaxis
BER93_09525	ENOG4105C8Q	Methyl-accepting chemotaxis
BER93_09535	ENOG4105C8Q	Methyl-accepting chemotaxis
BER93_09560	ENOG4105CBS	Chea signal transduction histidine kinase
BER93_09565	ENOG4108VYJ	response regulator receiver protein
BER93_09575	ENOG4108V3W	Chemotaxis protein, CheW
BER93_09580	ENOG4107QJE	Chromosome Partitioning Protein
BER93_09585	ENOG4105ER2	Ompa motb domain protein
BER93_09590	ENOG4105E14	MotA TolQ exbB proton channel
BER93_09710	ENOG41090A4	Pterin carbinolamine dehydratase
BER93_09750	ENOG4105EI2	Pseudouridine synthase
BER93_09755	ENOG4105C03	ribonuclease
BER93_09760	ENOG4105WH1	Two component transcriptional regulator luxr family
BER93_09775	ENOG4108V1T	peptidylprolyl cis-trans isomerase
BER93_09785	ENOG4107QQG	Dehydrogenase
BER93_09795	ENOG4105F2I	Transposase
BER93_09855	ENOG4105C2Z	ATP-dependent CLP protease ATP-binding subunit
BER93_10015	ENOG4108N8X	transition metal ion binding
BER93_10030	ENOG4105F2I	Transposase
BER93_10040	ENOG4105CB8	Multifunctional enzyme that catalyzes the SAM-dependent methylation of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 and then position C-12 or C-18 to form trimethylpyrrocorphin 2. It also catalyzes the conversion of precorrin-2 into siroheme. This reaction consists of the NAD- dependent oxidation of precorrin-2 into sirohydrochlorin and its subsequent ferrochelation into siroheme (By similarity)
BER93_10050	ENOG41085AN	Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor (By similarity)
BER93_10055	ENOG4105CVM	Molybdenum cofactor synthesis domain protein
BER93_10075	ENOG4105D06	uba thif-type nad fad binding protein
BER93_10080	ENOG4105CVM	Molybdenum cofactor synthesis domain protein
BER93_10085	ENOG4105DKZ	GTPase that plays an essential role in the late steps of ribosome biogenesis (By similarity)
BER93_10090	ENOG4105CNE	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (By similarity)
BER93_10110	ENOG4105C55	Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
BER93_10115	ENOG4108UGX	Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate (By similarity)
BER93_10130	ENOG4105CHU	acetyl-coa acetyltransferase
BER93_10135	ENOG4107R4J	Chloride channel
BER93_10145	ENOG4105D1H	recombination factor protein RarA
BER93_10150	ENOG4107Y7W	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) (By similarity)
BER93_10160	ENOG4105CNU	cell division protein FtsK
BER93_10165	ENOG4105C3M	thioredoxin reductase
BER93_10175	ENOG4108R4Z	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine (By similarity)
BER93_10180	ENOG4105K9U	however, it seems to stimulate more or less all the activities of the other two initiation factors, IF-2 and IF-3 (By similarity)
BER93_10185	ENOG4105C2Z	ATP-dependent CLP protease ATP-binding subunit
BER93_10190	ENOG4105KAE	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation (By similarity)
BER93_10200	ENOG4105CCJ	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 (By similarity)
BER93_10205	ENOG41075W9	High frequency lysogenization protein HflD homolog
BER93_10230	ENOG4108XG2	Histidine kinase
BER93_10235	ENOG4105BZU	Histidine kinase
BER93_10240	ENOG4105BZU	Histidine kinase
BER93_10260	ENOG4107R88	Chemotaxis protein (CheV)
BER93_10265	ENOG4105K88	Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body (By similarity)
BER93_10270	ENOG4108ZC9	flagellar basal-body rod protein flgc
BER93_10275	ENOG410822I	Flagellar hook capping protein
BER93_10280	ENOG4105BZE	flagellar hook protein, FlgE
BER93_10285	ENOG4108KPB	Flagellar basal-body rod protein FlgF
BER93_10290	ENOG4105CGA	flagellar basal-body rod protein FlgG
BER93_10295	ENOG4107W7W	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation (By similarity)
BER93_10300	ENOG4105D92	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation (By similarity)
BER93_10305	ENOG4108ZW7	flagellar rod assembly protein muramidase flgj
BER93_10315	ENOG4105DTJ	flagellar hook-associated protein
BER93_10325	ENOG4107W9T	flagellar hook-associated
BER93_10330	ENOG4105MQ3	flagellar protein FliS
BER93_10345	ENOG4105WH1	Two component transcriptional regulator luxr family
BER93_10350	ENOG4105DTW	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (By similarity)
BER93_10355	ENOG4105CMP	catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR (By similarity)
BER93_10360	ENOG4105C1W	two component, sigma54 specific, transcriptional regulator, Fis family
BER93_10370	ENOG4107RGC	Glycosyl transferase, family 2
BER93_10380	ENOG4105VQ0	flagellar hook-basal body complex protein fliE
BER93_10385	ENOG4105C1F	The M ring may be actively involved in energy transduction (By similarity)
BER93_10390	ENOG4105CS3	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation (By similarity)
BER93_10400	ENOG4108JIR	Flagellum-specific ATP synthase
BER93_10420	ENOG4105D24	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation (By similarity)
BER93_10425	ENOG4105DD5	Flagellar motor switch protein
BER93_10430	ENOG4105K0P	flagellar biosynthesis protein
BER93_10435	ENOG4105CN7	Flagellar biosynthetic protein FliP
BER93_10440	ENOG4105VS8	Flagellar biosynthetic protein fliq
BER93_10445	ENOG4105D19	Role in flagellar biosynthesis (By similarity)
BER93_10455	ENOG4105BZU	Histidine kinase
BER93_10460	ENOG4105BZU	Histidine kinase
BER93_10465	ENOG4105D00	flagellar biosynthetic protein flhB
BER93_10470	ENOG4105D7B	Flagellar biosynthesis protein flha
BER93_10475	ENOG4105FZW	flagellar biosynthesis regulator FlhF
BER93_10480	ENOG4107R21	site-determining protein
BER93_10485	ENOG4105DN4	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (By similarity)
BER93_10490	ENOG4108VYJ	response regulator receiver protein
BER93_10500	ENOG4105CBS	Chea signal transduction histidine kinase
BER93_10650	ENOG4105F2I	Transposase
BER93_10695	ENOG4105C26	Dehydrogenase
BER93_10715	ENOG4105D4A	Cell wall formation (By similarity)
BER93_10725	ENOG410841Q	phosphoesterase PA-phosphatase related protein
BER93_10730	ENOG4105C4E	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (By similarity)
BER93_10740	ENOG4108UYB	regulatoR
BER93_10770	ENOG4105F2I	Transposase
BER93_10795	ENOG4107QK4	glycoside hydrolase, family 3 domain protein
BER93_10840	ENOG4107QP8	phosphohexose isomerase
BER93_10845	ENOG4108Z2X	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine (By similarity)
BER93_10850	ENOG4108IAA	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate (By similarity)
BER93_10855	ENOG4105CCG	Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is tranferred onto alpha-ketoisovalerate to form ketopantoate (By similarity)
BER93_10860	ENOG4105K8U	2-Amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
BER93_10865	ENOG4105DJ0	Poly(A) Polymerase
BER93_10875	ENOG4105DZA	Converts GTP to 7,8-dihydroneopterin triphosphate (By similarity)
BER93_10885	ENOG4105C93	Xylose Isomerase
BER93_10890	ENOG4105CMG	Carbohydrate kinase
BER93_10950	ENOG4108RTU	Aldolase
BER93_10965	ENOG4105EI3	2-dehydro-3-deoxygalactonokinase EC 2.7.1.58
BER93_10970	ENOG4108Z4U	Ferredoxin
BER93_10980	ENOG4107TUS	Dihydrodipicolinate synthase
BER93_10995	ENOG4108YXY	alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
BER93_11000	ENOG4108IAB	Phoh family
BER93_11010	ENOG4105DWF	phosphomethylpyrimidine kinase
BER93_11025	ENOG4105CWB	LysR family transcriptional Regulator
BER93_11050	ENOG4105VM8	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding (By similarity)
BER93_11055	ENOG4105CIM	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (By similarity)
BER93_11060	ENOG4105Y3E	Modulates RecA activity (By similarity)
BER93_11065	ENOG4105C68	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (By similarity)
BER93_11070	ENOG4105DS7	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair (By similarity)
BER93_11075	ENOG4105CNK	Required, probably indirectly, for the hydroxylation of 2-octaprenylphenol to 2-octaprenyl-6-hydroxy-phenol, the fourth step in ubiquinone biosynthesis (By similarity)
BER93_11130	ENOG4105CMM	transposase
BER93_11180	ENOG4107TH8	cina domain protein
BER93_11190	ENOG4105C1N	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis (By similarity)
BER93_11195	ENOG4105KW8	RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs (By similarity)
BER93_11200	ENOG4105DKX	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) (By similarity)
BER93_11205	ENOG4105EEI	dihydropteroate synthase
BER93_11210	ENOG4105C3H	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity)
BER93_11215	ENOG4105F7M	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit (By similarity)
BER93_11220	ENOG4105HBR	Rna-binding protein
BER93_11225	ENOG4108UIV	Protein of unknown function (DUF498/DUF598)
BER93_11330	ENOG4105CS6	Rhs element vgr protein
BER93_11335	ENOG4105E6M	Sulphatase-modifying factor protein
BER93_11345	ENOG4105CS6	Rhs element vgr protein
BER93_11445	ENOG4105CS6	Rhs element vgr protein
BER93_11460	ENOG4105F2I	Transposase
BER93_11500	ENOG4105BZQ	cdp-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase
BER93_11520	ENOG4105CET	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria (By similarity)
BER93_11525	ENOG4105CHD	Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) (By similarity)
BER93_11530	ENOG4105BZ1	(ABC) transporter
BER93_11535	ENOG4105M15	transport protein ExbD
BER93_11545	ENOG4108EC8	DNA internalization-related competence protein ComEC
BER93_11555	ENOG4105CQU	Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner (By similarity)
BER93_11560	ENOG4105D60	lipoprotein releasing system transmembrane protein
BER93_11570	ENOG410681N	tpr repeat protein
BER93_11595	ENOG410612Q	succinate dehydrogenase (cytochrome b-556 subunit)
BER93_11615	ENOG4105CHC	glucokinase (EC 2.7.1.2)
BER93_11625	ENOG4105C01	Dihydroxy-acid dehydratase
BER93_11630	ENOG4108UHU	Aldolase
BER93_11645	ENOG4106RE7	Cytochrome
BER93_11685	ENOG4105BZU	Histidine kinase
BER93_11690	ENOG4105BZM	domain protein
BER93_11715	ENOG4105D1N	poly(r)-hydroxyalkanoic acid synthase, class
BER93_11725	ENOG4106PT6	cdpdiacylglycerol-serine O-phosphatidyltransferase
BER93_11760	ENOG4108Z6B	deaminase
BER93_11765	ENOG4105KST	dependent repressor
BER93_11770	ENOG4105C56	H( )-stimulated, divalent metal cation uptake system (By similarity)
BER93_11890	ENOG4105C0N	N-acetylglutamate semialdehyde dehydrogenase
BER93_11900	ENOG4105CAS	nag kinase
BER93_11910	ENOG4105CDH	Citrulline--aspartate ligase
BER93_11915	ENOG4105DBV	ornithine carbamoyltransferase
BER93_11925	ENOG4105C8N	cysteinyl-tRNA synthetase
BER93_11930	ENOG4105P9C	Participates in cysteine desulfuration mediated by SufS. Cysteine desulfuration mobilizes sulfur from L-cysteine to yield L-alanine and constitutes an essential step in sulfur metabolism for biosynthesis of a variety of sulfur-containing biomolecules. Functions as a sulfur acceptor for SufS, by mediating the direct transfer of the sulfur atom from the S-sulfanylcysteine of SufS, an intermediate product of cysteine desulfuration process (By similarity)
BER93_11940	ENOG4108V7X	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
BER93_11950	ENOG4105CD3	dihydroorotase
BER93_11960	ENOG4105F2I	Transposase
BER93_11995	ENOG4108VXP	Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress (By similarity)
BER93_12000	ENOG4108HWB	Non-specific O-methyltransferase that catalyzes the 2 O- methylation steps in the ubiquinone biosynthetic pathway (By similarity)
BER93_12005	ENOG4105D6T	Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine (By similarity)
BER93_12020	ENOG4105CK3	Lysine 2,3-aminomutase YodO family protein
BER93_12030	ENOG4105ECY	inositol monophosphatase
BER93_12035	ENOG4105CK4	Destroys radicals which are normally produced within the cells and which are toxic to biological systems (By similarity)
BER93_12050	ENOG4105C5H	ABC transporter
BER93_12055	ENOG4105C1J	atp-dependent rna helicase
BER93_12060	ENOG4109003	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis (By similarity)
BER93_12065	ENOG4105CNG	UPF0061 protein
BER93_12075	ENOG4108RXX	maleylacetoacetate isomerase
BER93_12080	ENOG4105VEQ	Cold shock protein
BER93_12090	ENOG4108VWS	Yaeq family
BER93_12095	ENOG4105CBX	hi0933 family
BER93_12105	ENOG4105D0M	Protease HtpX homolog
BER93_12110	ENOG4106F3G	Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon (By similarity)
BER93_12115	ENOG4105CHR	reductase
BER93_12135	ENOG4105DC6	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex (By similarity)
BER93_12140	ENOG4105C5C	n-acetylmuramoyl-l-alanine amidase
BER93_12150	ENOG4105DR1	Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration (By similarity)
BER93_12155	ENOG4105EH2	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) (By similarity)
BER93_12200	ENOG4107QK5	Homocysteine s-methyltransferase
BER93_12205	ENOG4108IQI	permease
BER93_12215	ENOG4105CKH	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (By similarity)
BER93_12225	ENOG4108R3D	Electron transport complex
BER93_12240	ENOG4105K6V	RNA polymerase
BER93_12265	ENOG4105CV9	cyclopropane-fatty-acyl-phospholipid synthase
BER93_12280	ENOG4105CV9	cyclopropane-fatty-acyl-phospholipid synthase
BER93_12285	ENOG4105M4H	endoribonuclease L-psp
BER93_12330	ENOG4105F27	Major Facilitator
BER93_12335	ENOG4105CCY	NADH flavin oxidoreductase, NADH oxidase
BER93_12340	ENOG4108Z8G	Alkylphosphonate utilization operon protein PhnA
BER93_12360	ENOG4105DFF	Rod shape-determining protein mreb
BER93_12375	ENOG4108RRZ	Transcription elongation factor GreB
BER93_12390	ENOG4105CBM	Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 (By similarity)
BER93_12415	ENOG4105DHP	deoxycytidine triphosphate deaminase
BER93_12435	ENOG4105C9K	Endothelin-converting enzyme 1
BER93_12460	ENOG4105MWK	D-amino acid dehydrogenase, small subunit
BER93_12470	ENOG4108YZY	peptidylprolyl cis-trans isomerase
BER93_12475	ENOG4105K4H	Nlp p60 protein
BER93_12480	ENOG4105K4H	Nlp p60 protein
BER93_12505	ENOG4105F2I	Transposase
BER93_12530	ENOG4105CC0	LysR family Transcriptional regulator
BER93_12535	ENOG4105CGR	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) (By similarity)
BER93_12550	ENOG4105CMY	5-enolpyruvylshikimate-3-phosphate synthase
BER93_12560	ENOG4107QM1	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine (By similarity)
BER93_12565	ENOG4105CCD	The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase (By similarity)
BER93_12570	ENOG4105ETE	Transcriptional regulator (LacI family
BER93_12575	ENOG4105BZ3	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) (By similarity)
BER93_12580	ENOG4105DE4	1-phosphofructokinase
BER93_12585	ENOG4105DM4	PTS System
BER93_12595	ENOG4107RAB	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA (By similarity)
BER93_12600	ENOG4107QN8	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA (By similarity)
BER93_12605	ENOG4105VIE	preprotein translocase, subunit YajC
BER93_12610	ENOG4105C6U	Exchanges the guanine residue with 7-aminomethyl-7- deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hypermodified nucleoside queuosine (Q) (7-(((4,5-cis- dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) (By similarity)
BER93_12615	ENOG4105E2N	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) (By similarity)
BER93_12625	ENOG4105CDM	Glutamate-1-semialdehyde aminotransferase
BER93_12640	ENOG4105CZ5	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate (By similarity)
BER93_12655	ENOG4105E08	Glycoside hydrolase, family 9
BER93_12665	ENOG4105K5D	4fe-4S ferredoxin iroN-sulfur binding
BER93_12675	ENOG4108ZEF	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate (By similarity)
BER93_12680	ENOG4106H78	methyltransferase
BER93_12685	ENOG4105CJX	Molecular chaperone. Has ATPase activity (By similarity)
BER93_12710	ENOG4105F2I	Transposase
BER93_12730	ENOG4105G6Z	alkaline phosphatase
BER93_12735	ENOG4105D3U	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine (By similarity)
BER93_12740	ENOG41067QG	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides (By similarity)
BER93_12745	ENOG4105CTB	Polyprenyl synthetase
BER93_12760	ENOG4105CMS	peptidase U62, modulator of DNA gyrase
BER93_12765	ENOG4105N42	UPF0307 protein
BER93_12770	ENOG4105D1U	peptidase U62 modulator of DNA gyrase
BER93_12785	ENOG4105C03	ribonuclease
BER93_12790	ENOG4108Z03	MAF-like protein
BER93_12795	ENOG4105MPN	Membrane
BER93_12800	ENOG4108UXA	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA (By similarity)
BER93_12830	ENOG4108Z1W	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) (By similarity)
BER93_12845	ENOG4105C8T	Leucyl-tRNA synthetase
BER93_12855	ENOG4107QR8	Thioredoxin
BER93_12880	ENOG4105FTC	Lytic transglycosylase catalytic
BER93_12890	ENOG4105K44	type iii secretion
BER93_12905	ENOG4108JIR	Flagellum-specific ATP synthase
BER93_12920	ENOG4107Y59	type iii secretion
BER93_12940	ENOG4108HR8	type iii secretion
BER93_12960	ENOG4105VS8	Flagellar biosynthetic protein fliq
BER93_12990	ENOG4108E16	pectate lyase
BER93_13015	ENOG4105WG9	Conserved Protein
BER93_13050	ENOG4105BZ1	(ABC) transporter
BER93_13085	ENOG4105FE9	pseudouridine synthase
BER93_13095	ENOG4105BZU	Histidine kinase
BER93_13160	ENOG4105UGU	tonB-dependent Receptor
BER93_13170	ENOG4108IEG	Formate dehydrogenase Alpha subunit
BER93_13180	ENOG4105EY9	peptidase S8 and S53, subtilisin, kexin, sedolisin
BER93_13215	ENOG4105MYN	Zinc uptake regulation protein
BER93_13220	ENOG4105C20	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) (By similarity)
BER93_13250	ENOG4105D6S	protein involved in catabolism of external DNA
BER93_13260	ENOG4108JA2	transcriptioN-repair coupling factor
BER93_13265	ENOG4105D86	that it carries out the mismatch recognition step. This protein has a weak ATPase activity (By similarity)
BER93_13270	ENOG4105C1X	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity (By similarity)
BER93_13305	ENOG4105DKJ	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate (By similarity)
BER93_13340	ENOG4105D22	carbon starvation protein
BER93_13345	ENOG4105VCD	cytoplasmic protein
BER93_13350	ENOG4107UB3	HAD-superfamily hydrolase subfamily IA variant 3
BER93_13375	ENOG4105C7W	Xanthine dehydrogenase
BER93_13375	ENOG4105C7W	Xanthine dehydrogenase
BER93_13385	ENOG4108UUM	single-stranded DNA-binding protein
BER93_13395	ENOG4105EAH	synthase
BER93_13420	ENOG4105CFH	Aspartokinase
BER93_13430	ENOG4105JAB	phenazine biosynthesis protein, phzf family
BER93_13440	ENOG4108Z9K	Osmotically inducible protein
BER93_13445	ENOG4105CXT	aspartate transcarbamylase
BER93_13450	ENOG4107Y66	Could be a nuclease that resolves Holliday junction intermediates in genetic recombination (By similarity)
BER93_13455	ENOG4108UJU	UPF0301 protein
BER93_13480	ENOG4105CZX	twitching motility protein
BER93_13485	ENOG4105CZX	twitching motility protein
BER93_13490	ENOG4105DFA	alanine racemase domain protein
BER93_13495	ENOG4105II7	pyrroline-5-carboxylate reductase
BER93_13535	ENOG4105C3K	feS assembly ATPase SufC
BER93_13540	ENOG4105JRK	feS assembly protein SufD
BER93_13545	ENOG4105C9B	Cysteine desulfurase
BER93_13560	ENOG4108ESX	Receptor
BER93_13565	ENOG4107E2E	PKHD-type hydroxylase
BER93_13595	ENOG41083P1	competence protein ComEA helix-hairpin-helix repeat protein
BER93_13600	ENOG4105C9Y	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls (By similarity)
BER93_13610	ENOG4105EHM	Aminoglycoside phosphotransferase
BER93_13615	ENOG4108S0S	Nucleotidyl transferase
BER93_13630	ENOG4105C02	permease
BER93_13645	ENOG4108V3E	phosphoribosylglycinamide formyltransferase
BER93_13670	ENOG4105CDF	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine (By similarity)
BER93_13680	ENOG4105C2X	Arabinose 5-phosphate isomerase
BER93_13685	ENOG4108Z4R	3-deoxy-d-manno-octulosonate 8-phosphate phosphatase
BER93_13695	ENOG4105WI0	lipopolysaccharide transport periplasmic protein lptA
BER93_13700	ENOG4108IUZ	ABC transporter
BER93_13705	ENOG4105DTW	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (By similarity)
BER93_13710	ENOG41080QH	sigma 54 modulation protein ribosomal protein S30EA
BER93_13715	ENOG4107RM2	PTS IIA-like nitrogen-regulatory protein PtsN
BER93_13720	ENOG4105D1C	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion (By similarity)
BER93_13725	ENOG4105C21	Displays ATPase and GTPase activities (By similarity)
BER93_13735	ENOG41080Z8	PHOSPHOCARRIER protein
BER93_13740	ENOG4105BZ3	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) (By similarity)
BER93_13745	ENOG4105CJW	magnesium transporter
BER93_13780	ENOG4105CHC	glucokinase (EC 2.7.1.2)
BER93_13795	ENOG4105VRS	hydrolase family 18
BER93_13800	ENOG4105E2D	ec 3.2.1.52
BER93_13840	ENOG4105F2I	Transposase
BER93_13885	ENOG4105EPW	hflc protein
BER93_13890	ENOG4107QJR	hflk protein
BER93_13895	ENOG4105M3Z	response regulator
BER93_13960	ENOG4105C7F	AcnD-accessory protein PrpF
BER93_13965	ENOG4108I0Z	Aconitate hydratase
BER93_13970	ENOG4105BZN	citrate synthase
BER93_13975	ENOG4105CR4	methylisocitrate lyase
BER93_13980	ENOG4108JU7	Transcriptional regulator
BER93_13995	ENOG4105F2I	Transposase
BER93_14015	ENOG4107QRG	dna polymerase iii
BER93_14020	ENOG4105HHA	aminodeoxychorismate lyase
BER93_14030	ENOG4105C0Q	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP (By similarity)
BER93_14035	ENOG4105VNB	Carrier of the growing fatty acid chain in fatty acid biosynthesis (By similarity)
BER93_14040	ENOG4105CHR	reductase
BER93_14045	ENOG4105CJF	Malonyl coA-acyl carrier protein transacylase
BER93_14050	ENOG4105CCZ	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids (By similarity)
BER93_14055	ENOG4105VGS	50s ribosomal protein l32
BER93_14060	ENOG4105FCQ	metal-binding, possibly nucleic acid-binding protein
BER93_14065	ENOG4108UHJ	MAF-like protein
BER93_14075	ENOG41089I4	Inherit from COG: Glycosyl transferase, family 2
BER93_14085	ENOG4105C7R	Atpase associated with various cellular activities aaa_3
BER93_14095	ENOG4105F8C	transglutaminase domain-containing protein
BER93_14105	ENOG4105K59	histidine triad (HIT) protein
BER93_14115	ENOG4105KDX	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection (By similarity)
BER93_14120	ENOG4107QMP	dna polymerase iii subunits gamma and tau
BER93_14135	ENOG4108ZAF	Molybdopterin
BER93_14145	ENOG4108YXW	Together with MoaA, is involved in the conversion of 5'- GTP to cyclic pyranopterin monophosphate (cPMP or molybdopterin precursor Z) (By similarity)
BER93_14150	ENOG4105CM1	Catalyzes, together with MoaC, the conversion of 5'-GTP to cyclic pyranopterin monophosphate (cPMP or molybdopterin precursor Z) (By similarity)
BER93_14155	ENOG4105IES	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA (By similarity)
BER93_14160	ENOG4108W7E	Catalyzes the ATP-dependent phosphorylation of the 3- deoxy-D-manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position (By similarity)
BER93_14165	ENOG4105DKP	glycosyl transferase, family 9
BER93_14180	ENOG4108ZF3	Phosphatase
BER93_14185	ENOG4108JDX	DNA polymerase iii, epsilon subunit
BER93_14190	ENOG4108UMW	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (By similarity)
BER93_14200	ENOG4108RW0	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid (By similarity)
BER93_14205	ENOG41068JE	domain protein
BER93_14215	ENOG4105ERD	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates (By similarity)
BER93_14220	ENOG4105DRY	peptidase s9 prolyl oligopeptidase active site domain protein
BER93_14225	ENOG4105EPD	Oligopeptide transporter, Opt family
BER93_14305	ENOG4107XKX	isoquinoline 1-oxidoreductase, alpha subunit
BER93_14310	ENOG4105DIP	Molybdopterin dehydrogenase FAD-binding
BER93_14315	ENOG4105C7W	Xanthine dehydrogenase
BER93_14320	ENOG4105CYX	Short-chain dehydrogenase reductase Sdr
BER93_14365	ENOG4105F2I	Transposase
BER93_14390	ENOG4105DEA	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation
BER93_14395	ENOG4105CCQ	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (By similarity)
BER93_14400	ENOG4105CHN	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP (By similarity)
BER93_14430	ENOG4105EIN	peptidylprolyl cis-trans isomerase
BER93_14455	ENOG4105EIZ	Catalyzes the conversion of 6-carboxy-5,6,7,8- tetrahydropterin (CPH4) to 7-carboxy-7-deazaguanine (CDG) (By similarity)
BER93_14465	ENOG4105KCK	Peptidoglycan-associated lipoprotein
BER93_14470	ENOG4107R6Y	Involved in the TonB-independent uptake of proteins (By similarity)
BER93_14480	ENOG4105M8F	Biopolymer transport protein exbD tolR
BER93_14485	ENOG4105E02	MotA TolQ exbB proton channel
BER93_14490	ENOG4107YD3	Thioesterase
BER93_14500	ENOG4105DFH	Transport of potassium into the cell (By similarity)
BER93_14505	ENOG4105KA4	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB (By similarity)
BER93_14510	ENOG4105NHU	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group (By similarity)
BER93_14530	ENOG4105C9M	aspartyl-trna synthetase
BER93_14545	ENOG4105CVE	Lytic murein transglycosylase
BER93_14550	ENOG4105C5H	ABC transporter
BER93_14555	ENOG4107RNH	Outer membrane receptor FepA
BER93_14570	ENOG4107RNH	Outer membrane receptor FepA
BER93_14575	ENOG4105CHI	Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans-periplasmic membrane protein TonB (By similarity)
BER93_14580	ENOG4105CKD	glutathione-regulated potassium-efflux system protein
BER93_14610	ENOG4105C85	amino acid
BER93_14620	ENOG4105C8Q	Methyl-accepting chemotaxis
BER93_14640	ENOG4105CUB	amino acid
BER93_14645	ENOG4108MHS	Lysyl endopeptidase
BER93_14670	ENOG4106032	Glutathionylspermidine synthase
BER93_14695	ENOG4108P9J	Phage shock protein A
BER93_14710	ENOG4108S7T	Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) (By similarity)
BER93_14715	ENOG4105KHV	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate (By similarity)
BER93_14720	ENOG4105D49	3-dehydroquinate synthase
BER93_14730	ENOG4105CFZ	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (By similarity)
BER93_14735	ENOG4105C0R	drug resistance transporter emrb qaca subfamily
BER93_14740	ENOG4105F2I	Transposase
BER93_14745	ENOG4105BZU	Histidine kinase
BER93_14750	ENOG4105BZU	Histidine kinase
BER93_14815	ENOG4105KAF	membrAne
BER93_14820	ENOG4105DNJ	May play a role in the repair of endogenous alkylation damage (By similarity)
BER93_14830	ENOG41090KH	cytochrome o ubiquinol oxidase (subunit iv)
BER93_14835	ENOG4105CCU	oxidase (Subunit III)
BER93_14840	ENOG4105BZ9	Cytochrome C oxidase, subunit I
BER93_14845	ENOG4105E2S	oxidase) subunit II
BER93_14855	ENOG4105C48	Converts 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) (By similarity)
BER93_14860	ENOG4105M02	This protein specifically catalyzes the removal of signal peptides from prolipoproteins (By similarity)
BER93_14870	ENOG4105DTN	riboflavin biosynthesis protein ribF
BER93_14875	ENOG4105CJR	Integral membrane protein (MviN
BER93_14880	ENOG4105KQV	Binds directly to 16S ribosomal RNA (By similarity)
BER93_14885	ENOG4105C9R	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate (By similarity). It may play a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
BER93_14895	ENOG4105KK9	This protein binds to 23S rRNA in the presence of protein L20 (By similarity)
BER93_14900	ENOG4105C5U	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate (By similarity)
BER93_14905	ENOG4108TGP	Thioesterase superfamily protein
BER93_14920	ENOG4105C29	acyl-CoA thioesterase
BER93_14935	ENOG4105GFR	rna polymerase sigma factor
BER93_14945	ENOG4105DWA	May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate
BER93_14975	ENOG4108EF9	Catalyzes two reactions the first one is the production of beta-formyl glycinamide ribonucleotide (GAR) from formate, ATP and beta GAR
BER93_15020	ENOG4105WH1	Two component transcriptional regulator luxr family
BER93_15025	ENOG4105BZU	Histidine kinase
BER93_15040	ENOG4107QMS	site-determining protein
BER93_15045	ENOG4105VJP	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell (By similarity)
BER93_15055	ENOG4105DHQ	Histidine kinase
BER93_15075	ENOG4105DIJ	Phosphoethanolamine transferase
BER93_15095	ENOG4105CBI	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
BER93_15110	ENOG4106AXJ	AraC family transcriptional regulator
BER93_15155	ENOG4105GAV	receptor
BER93_15170	ENOG4105C6X	Major Facilitator
BER93_15175	ENOG4105DBM	Siderophore biosynthesis protein
BER93_15180	ENOG4105CU5	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine (By similarity)
BER93_15195	ENOG4105C2Z	ATP-dependent CLP protease ATP-binding subunit
BER93_15320	ENOG4105C0C	Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate (By similarity)
BER93_15330	ENOG4105VW4	glutaredoxin 3
BER93_15340	ENOG4105ERG	peptidase m48, ste24p
BER93_15345	ENOG4105CK6	Two component transcriptional regulator (Winged helix family
BER93_15350	ENOG4105BZU	Histidine kinase
BER93_15355	ENOG4105CUU	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) (By similarity)
BER93_15360	ENOG4105C9X	ppx gppa phosphatase
BER93_15370	ENOG4105EYK	Phosphatidylglycerophosphatase B
BER93_15375	ENOG4105F10	Catalyzes the hydrolysis of the pyrophosphate bond of UDP-2,3-diacylglucosamine to yield 2,3-diacylglucosamine 1- phosphate (lipid X) and UMP (By similarity)
BER93_15385	ENOG4108YP4	Metalloprotease, specifically cleaves on the N-terminal side of aspartyl, glutamyl and cysteic acid residues (By similarity)
BER93_15395	ENOG4105ED9	Protein of unknown function (DUF455)
BER93_15400	ENOG4105CBA	glutamine phosphoribosylpyrophosphate amidotransferase
BER93_15415	ENOG4105DPM	folylpolyglutamate synthase Dihydrofolate synthase
BER93_15445	ENOG4105CWX	Alpha-1,2-mannosidase
BER93_15500	ENOG4105F5P	DNA-damage-inducible protein d
BER93_15515	ENOG4105DZR	Type I site-specific deoxyribonuclease
BER93_15555	ENOG4106PT6	cdpdiacylglycerol-serine O-phosphatidyltransferase
BER93_15585	ENOG4105DHJ	ABC, transporter
BER93_15590	ENOG4108SNX	Mammalian cell entry related domain protein
BER93_15605	ENOG4105DWH	electron transfer flavoprotein-ubiquinone oxidoreductase
BER93_15620	ENOG4107QP7	CoA-transferase subunit A
BER93_15625	ENOG4107QKV	phosphomannomutase
BER93_15635	ENOG4105DBZ	Dtdp-4-dehydrorhamnose reductase
BER93_15640	ENOG4108URP	Dtdp-4-dehydrorhamnose 3,5-epimerase
BER93_15655	ENOG4105BZJ	Electron transfer flavoprotein
BER93_15660	ENOG4105C10	Electron transfer flavoprotein
BER93_15670	ENOG4105CKK	Glycosyl transferase, family 2
BER93_15690	ENOG4107TXM	Nad-dependent epimerase dehydratase
BER93_15695	ENOG4105C0K	Gdp-mannose 4,6-dehydratase
BER93_15720	ENOG4105EY8	ABC transporter
BER93_15735	ENOG4105C28	cystathionine
BER93_15760	ENOG4105CZX	twitching motility protein
BER93_15770	ENOG4108RXX	maleylacetoacetate isomerase
BER93_15780	ENOG4105C1J	atp-dependent rna helicase
BER93_15785	ENOG4107ZIF	6-carboxy-5,6,7,8-tetrahydropterin synthase
BER93_15795	ENOG4105E78	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring (By similarity)
BER93_15815	ENOG4105F2I	Transposase
BER93_15825	ENOG4108VXP	Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress (By similarity)
BER93_15830	ENOG4105CQ3	Poorly processive error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by polIV. Exhibits no 3-5 exonuclease (proofreading) activity. May be involved in translesional synthesis in conjunction with the beta clamp from polIII (By similarity)
BER93_15840	ENOG4108RKI	Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl- ACP to E-(2)-decenoyl-ACP and then its isomerization to Z-(3)- decenoyl-ACP. Can catalyze the dehydratase reaction for beta- hydroxyacyl-ACPs with saturated chain lengths up to 16 0, being most active on intermediate chain length (By similarity)
BER93_15855	ENOG4105DGW	oligopeptidase A
BER93_15870	ENOG4105E3B	Multicopper oxidase
BER93_15890	ENOG4105C46	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source (By similarity)
BER93_15905	ENOG4105BZU	Histidine kinase
BER93_15915	ENOG4105CAJ	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain (By similarity)
BER93_15930	ENOG4105KNM	Produces ATP from ADP in the presence of a proton gradient across the membrane (By similarity)
BER93_15935	ENOG4105C4J	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits (By similarity)
BER93_15940	ENOG4105J80	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex (By similarity)
BER93_15945	ENOG4105CDG	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit (By similarity)
BER93_15950	ENOG4107S15	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (By similarity)
BER93_15960	ENOG4105KY6	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (By similarity)
BER93_15965	ENOG4107RAZ	it plays a direct role in the translocation of protons across the membrane (By similarity)
BER93_15980	ENOG4107QN2	dihydrolipoyl dehydrogenase
BER93_16015	ENOG4105D01	(LipO)protein
BER93_16020	ENOG4108UMI	ABC transporter, permease
BER93_16025	ENOG4108JEI	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system (By similarity)
BER93_16030	ENOG4108VPT	UPF0234 protein
BER93_16075	ENOG4105I08	Pseudouridine synthase
BER93_16080	ENOG4105D8J	Specifically methylates the guanine in position 1207 of 16S rRNA in the 30S particle (By similarity)
BER93_16100	ENOG4105BZU	Histidine kinase
BER93_16120	ENOG4105CJ4	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids (By similarity)
BER93_16125	ENOG4105MWK	D-amino acid dehydrogenase, small subunit
BER93_16145	ENOG4107RD7	Flagellar Motor Protein, MotA
BER93_16150	ENOG4105ER2	Ompa motb domain protein
BER93_16250	ENOG4105CMM	transposase
BER93_16305	ENOG4108Z38	Catalyzes a trans-dehydration via an enolate intermediate (By similarity)
BER93_16310	ENOG4105KM4	Acetyl-CoA carboxylase, biotin carboxyl carrier protein
BER93_16320	ENOG4105CER	acetyl-CoA carboxylase biotin carboxylase
BER93_16325	ENOG4105F59	Methylates ribosomal protein L11 (By similarity)
BER93_16345	ENOG4105VY0	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters (By similarity)
BER93_16355	ENOG4105DC1	bifunctional purine biosynthesis protein purh
BER93_16360	ENOG4105C12	Phosphoribosylglycinamide synthetase
BER93_16365	ENOG4105EM2	membrane
BER93_16385	ENOG4108J8Q	Catalyzes the facilitated diffusion of 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) into the cell (By similarity)
BER93_16400	ENOG4105DH2	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group (By similarity)
BER93_16405	ENOG4105E09	nadh pyrophosphatase
BER93_16415	ENOG4105F2I	Transposase
BER93_16480	ENOG4105C01	Dihydroxy-acid dehydratase
BER93_16485	ENOG4108Z0R	Transferase
BER93_16515	ENOG4105F2I	Transposase
BER93_16520	ENOG4105BZS	acriflavin resistance protein
BER93_16525	ENOG4105BZS	acriflavin resistance protein
BER93_16540	ENOG4105CCY	NADH flavin oxidoreductase, NADH oxidase
BER93_16545	ENOG4105NDF	NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form. May also have NAD-dependent lysine demalonylase and desuccinylase activity (By similarity)
BER93_16555	ENOG4105D94	Major Facilitator Superfamily
BER93_16560	ENOG4105F8V	Hydrolase, tatD family
BER93_16565	ENOG4108W15	Protein of unknown function (DUF1456)
BER93_16575	ENOG4105CQ7	ATP-dependent helicase
BER93_16595	ENOG4108R99	pseudouridine synthase
BER93_16610	ENOG4105CJH	Alcohol dehydrogenase zinc-binding domain protein
BER93_16615	ENOG4105CV8	reductase
BER93_16625	ENOG4108ZHJ	Organic hydroperoxide resistance protein
BER93_16635	ENOG4105D6Z	AFG1 family ATPase
BER93_16685	ENOG4105C1G	acyl-Coa dehydrogenase
BER93_16690	ENOG4107QX3	carboxylase
BER93_16730	ENOG4108Y1S	CRISPR-associated protein, Csy4 family
BER93_16755	ENOG4105BZS	acriflavin resistance protein
BER93_16765	ENOG4105C3T	may be the GTPase, regulating ATP sulfurylase activity (By similarity)
BER93_16770	ENOG4105C11	sulfate adenylyltransferase), subunit 2
BER93_16775	ENOG4107EER	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component (By similarity)
BER93_16780	ENOG4105ET1	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate (By similarity)
BER93_16785	ENOG4105ET3	Reduction of activated sulfate into sulfite (By similarity)
BER93_16795	ENOG4105CHI	Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans-periplasmic membrane protein TonB (By similarity)
BER93_16805	ENOG4105BZU	Histidine kinase
BER93_16815	ENOG4107R11	Transcriptional regulator
BER93_16835	ENOG4107R1Y	fructose-bisphosphate aldolase
BER93_16840	ENOG4105CA9	Pyruvate kinase
BER93_16845	ENOG4108VXP	Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress (By similarity)
BER93_16875	ENOG4105E0F	Histidine kinase
BER93_16930	ENOG4105F2I	Transposase
BER93_16945	ENOG4105C17	glyceraldehyde-3-phosphate dehydrogenase
BER93_16960	ENOG4107S76	domain protein
BER93_16965	ENOG4108S6J	ABC transporter, periplasmic molybdate-binding protein
BER93_16970	ENOG4105E0C	molybdate abc transporter
BER93_16975	ENOG4105CGB	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system (By similarity)
BER93_16990	ENOG4105NA0	Transcriptional regulator
BER93_17000	ENOG4107Y2H	ErfK ybiS ycfS ynhG family protein
BER93_17005	ENOG4105E4C	Lytic transglycosylase catalytic
BER93_17010	ENOG4105CNM	Receptor
BER93_17015	ENOG4105CV1	Transketolase (EC 2.2.1.1)
BER93_17020	ENOG4105CK2	sodium dicarboxylate symporter
BER93_17050	ENOG4105C7R	Atpase associated with various cellular activities aaa_3
BER93_17075	ENOG4105F2I	Transposase
BER93_17090	ENOG4105EEQ	Na H antiporter
BER93_17120	ENOG4108UN4	phage SPO1 DNA polymerase-related protein
BER93_17130	ENOG4105CPC	Aldo Keto reductase
BER93_17140	ENOG4105C9K	Endothelin-converting enzyme 1
BER93_17155	ENOG4107QTZ	amino acid
BER93_17170	ENOG4108Z9Z	response to DNA damage stimulus
BER93_17175	ENOG4105WEF	catalase
BER93_17190	ENOG4105BZU	Histidine kinase
BER93_17205	ENOG4105C1W	two component, sigma54 specific, transcriptional regulator, Fis family
BER93_17230	ENOG4105CYX	Short-chain dehydrogenase reductase Sdr
BER93_17235	ENOG4105CMR	udp-glucose 4-epimerase
BER93_17255	ENOG4105BZ1	(ABC) transporter
BER93_17270	ENOG4105E2A	Dehydrogenase
BER93_17325	ENOG4105DA5	(ABC) transporter
BER93_17355	ENOG4105CHH	sulfate transporter
BER93_17400	ENOG4105DAQ	Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) (By similarity)
BER93_17455	ENOG41065ZS	Transfers 2'-(5-triphosphoribosyl)-3'-dephosphocoenzyme- A to the apo- acyl-carrier-protein of the malonate decarboxylase to yield holo- acyl-carrier-protein (By similarity)
BER93_17470	ENOG4105WSE	Subunit of malonate decarboxylase, it is an acyl carrier protein to which acetyl and malonyl thioester residues are bound via a 2'-(5''-phosphoribosyl)-3'-dephospho-CoA prosthetic group and turn over during the catalytic mechanism (By similarity)
BER93_17485	ENOG4105VNT	transposase (IS4 family) protein
BER93_17490	ENOG4108YYC	ycei family
BER93_17495	ENOG4108RDT	NADH dehydrogenase NAD(P)H nitroreductase)
BER93_17505	ENOG4105EX9	Membrane
BER93_17510	ENOG4105CE6	Adenylation and deadenylation of glutamate--ammonia ligase (By similarity)
BER93_17540	ENOG4105E99	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) (By similarity)
BER93_17555	ENOG4105VNT	transposase (IS4 family) protein
BER93_17560	ENOG4105CJ9	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions (By similarity)
BER93_17565	ENOG4105K5Y	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter (By similarity)
BER93_17580	ENOG4105VF7	tolerance protein
BER93_17585	ENOG4105CSG	Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps (By similarity)
BER93_17625	ENOG4105K4T	epimerase
BER93_17650	ENOG4105C9C	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position (By similarity)
BER93_17655	ENOG4105C9C	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position (By similarity)
BER93_17660	ENOG4105CXW	Synthesizes alpha-1,4-glucan chains using ADP-glucose (By similarity)
BER93_17665	ENOG4105BZU	Histidine kinase
BER93_17670	ENOG4105F32	YngK protein
BER93_17675	ENOG4105CKW	Inner membrane protein yedI
BER93_17685	ENOG4105EGS	Mechanosensitive ion channel
BER93_17700	ENOG4105C4G	Synthesis of 3-octaprenyl-4-hydroxybenzoate (By similarity)
BER93_17705	ENOG41081UC	Inherit from COG: Competence protein
BER93_17710	ENOG4105CZF	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism (By similarity)
BER93_17795	ENOG4105E98	transcriptional regulator DeoR family
BER93_17800	ENOG4105C6V	Glycerol-3-phosphate dehydrogenase
BER93_17805	ENOG4105D8C	Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity (By similarity)
BER93_17835	ENOG4105DGW	oligopeptidase A
BER93_17850	ENOG4108YZN	class I peptide chain release factor
BER93_17880	ENOG4105CNK	Required, probably indirectly, for the hydroxylation of 2-octaprenylphenol to 2-octaprenyl-6-hydroxy-phenol, the fourth step in ubiquinone biosynthesis (By similarity)
BER93_17900	ENOG4107VBM	3-beta hydroxysteroid dehydrogenase isomerase
BER93_17905	ENOG410680H	amp-dependent synthetase and ligase
BER93_17910	ENOG4105PI0	Ferredoxin
BER93_17915	ENOG4108J2P	Alpha beta hydrolase fold
BER93_17935	ENOG4108YX9	iron--sulfur cluster insertion protein erpA
BER93_17955	ENOG4105BZU	Histidine kinase
BER93_17960	ENOG4105BZU	Histidine kinase
BER93_17965	ENOG4108UQY	Iron-storage protein
BER93_17990	ENOG4108UJD	30S ribosomal protein S9
BER93_17995	ENOG4108UM5	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly (By similarity)
BER93_18010	ENOG4105FDS	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine (By similarity)
BER93_18015	ENOG4107RYR	Transcriptional regulator, Crp Fnr family
BER93_18025	ENOG4105DK0	Indole-3-glycerol phosphate synthase
BER93_18030	ENOG4108I0Q	anthranilate phosphoribosyltransferase
BER93_18040	ENOG4105DDQ	anthranilate synthase
BER93_18060	ENOG4107STF	Involved in phosphonate degradation (By similarity)
BER93_18085	ENOG4105CVG	Homoserine O-transsuccinylase
BER93_18095	ENOG4105CRQ	synthase (Component I)
BER93_18100	ENOG4107TE5	Lipid kinase
BER93_18105	ENOG4105KD7	acetyltransferase
BER93_18120	ENOG41066UG	Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host (By similarity)
BER93_18160	ENOG4105D65	subunit l
BER93_18165	ENOG4108ZE9	Monovalent cation H antiporter subunit C
BER93_18170	ENOG4107R4Z	monovalent cation h antiporter subunit d
BER93_18180	ENOG4105W4C	monovalent cation H antiporter subunit F
BER93_18185	ENOG4105KJM	monovalent cation h antiporter subunit g
BER93_18190	ENOG4105F2I	Transposase
BER93_18225	ENOG4108VBV	N-Acetylmuramoyl-L-alanine amidase
BER93_18235	ENOG4105DTQ	mandelate racemase muconate lactonizing
BER93_18245	ENOG4105D5Q	Arginine ornithine antiporter
BER93_18270	ENOG4107QK4	glycoside hydrolase, family 3 domain protein
BER93_18275	ENOG4107ZVW	dihydroneopterin aldolase
BER93_18280	ENOG4105CPM	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine (By similarity)
BER93_18285	ENOG4105VCC	30S ribosomal protein S21
BER93_18295	ENOG4107S2Z	UPF0761 membrane protein
BER93_18300	ENOG4105C9G	DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments on both template strands at replication forks during chromosomal DNA synthesis (By similarity)
BER93_18305	ENOG4105DHU	Bile acid
BER93_18315	ENOG4105F1R	Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group (By similarity)
BER93_18340	ENOG4107QS1	Cytochrome C Oxidase, Subunit III
BER93_18345	ENOG4105FT1	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I (By similarity)
BER93_18355	ENOG4105CV4	Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) (By similarity)
BER93_18365	ENOG4105C26	Dehydrogenase
BER93_18370	ENOG4105DA0	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) (By similarity)
BER93_18375	ENOG4105DR5	peptidase
BER93_18380	ENOG4105ED7	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling (By similarity)
BER93_18390	ENOG4105EYM	Major Facilitator superfamily
BER93_18400	ENOG4105CGK	Exodeoxyribonuclease III
BER93_18405	ENOG4107QP2	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) (By similarity)
BER93_18415	ENOG4107QJE	Chromosome Partitioning Protein
BER93_18420	ENOG4105FA0	parb-like partition protein
BER93_18440	ENOG4105CKK	Glycosyl transferase, family 2
BER93_18465	ENOG4105CJS	Phosphopantothenoylcysteine decarboxylase
BER93_18470	ENOG4105W5Q	DNA repair protein (RadC
BER93_18475	ENOG4105C75	arginyL-tRNA synthetase
BER93_18485	ENOG4105EMU	Dehydrogenase
BER93_18520	ENOG4105CEY	Amp-dependent synthetase and ligase
BER93_18530	ENOG4105EB3	Histidine kinase
BER93_18535	ENOG4105XJC	Two component transcriptional regulator (Winged helix family
BER93_18545	ENOG4105CEH	Catalyzes the synthesis of dihydrouridine a modified base found in the D-loop of most tRNAs (By similarity)
BER93_18565	ENOG4105CH6	catalase
BER93_18570	ENOG4105DVT	helicase
BER93_18595	ENOG4105D52	delta-aminolevulinic acid dehydratase
BER93_18635	ENOG4105DWR	Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin (By similarity)
BER93_18640	ENOG4105C5F	glutamine synthetase
BER93_18650	ENOG4105BZU	Histidine kinase
BER93_18655	ENOG4105CUX	Signal transduction histidine kinase
BER93_18660	ENOG4105C1W	two component, sigma54 specific, transcriptional regulator, Fis family
BER93_18665	ENOG4108Z7T	Destroys radicals which are normally produced within the cells and which are toxic to biological systems (By similarity)
BER93_18670	ENOG4108Z7T	Destroys radicals which are normally produced within the cells and which are toxic to biological systems (By similarity)
BER93_18700	ENOG4108Z20	Acyl-transferase
BER93_18705	ENOG4105KA0	thioesterase Superfamily protein
BER93_18710	ENOG4107RZC	phospholipase d
BER93_18720	ENOG4105M4E	phosphohistidine phosphatase, SixA
BER93_18725	ENOG4105D1F	ATP-binding protein
BER93_18770	ENOG4105E90	ABC transporter
BER93_18775	ENOG4108IJ8	ABC transporter
BER93_18785	ENOG4105DKW	ABC transporter
BER93_18790	ENOG4108YXU	transcriptional regulator AsnC family
BER93_18795	ENOG4105MIR	Phenylalanine 4-monooxygenase
BER93_18800	ENOG4105CHR	reductase
BER93_18805	ENOG4105D50	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate (By similarity)
BER93_18815	ENOG4105ETE	Transcriptional regulator (LacI family
BER93_18845	ENOG4105EBR	Carboxylesterase
BER93_18860	ENOG4105CG3	alpha amylase, catalytic region
BER93_18865	ENOG4105EP6	Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB (By similarity)
BER93_18950	ENOG4105DQ4	alcohol dehydrogenase
BER93_18955	ENOG4105BZ8	glutamate synthase
BER93_18960	ENOG4105CBC	glutamate synthase
BER93_18980	ENOG4108HMW	glycyl-tRNA synthetase, alpha subunit
BER93_18985	ENOG4107QHF	type ii secretion system protein e
BER93_18990	ENOG4105CM0	Catalyzes the synthesis of GMP from XMP (By similarity)
BER93_19000	ENOG4105DCX	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides (By similarity)
BER93_19005	ENOG4105X8U	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation (By similarity)
BER93_19020	ENOG4105CFX	Catalyzes the ferrous insertion into protoporphyrin IX (By similarity)
BER93_19035	ENOG4105DH7	May be involved in recombination (By similarity)
BER93_19040	ENOG4105CB3	Required for the thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32) (By similarity)
BER93_19045	ENOG4105C93	Xylose Isomerase
BER93_19050	ENOG4105ETE	Transcriptional regulator (LacI family
BER93_19055	ENOG4105D0H	Alpha-glucuronidase (EC 3.2.1.139)
BER93_19125	ENOG4105DSB	aldose 1-epimerase
BER93_19135	ENOG4105K5B	UPF0225 protein
BER93_19140	ENOG4105EJ9	Membrane
BER93_19180	ENOG4105EUJ	GTP cyclohydrolase i
BER93_19185	ENOG4105CSH	Transporter
BER93_19215	ENOG4105F2I	Transposase
BER93_19230	ENOG4105VDM	plasmid maintenance system antidote protein, xre family
BER93_19235	ENOG41080ET	plasmid maintenance system killer protein
BER93_19245	ENOG4107QKA	exodeoxyribonuclease V beta
BER93_19250	ENOG4105DSY	exodeoxyribonuclease V, gamma
BER93_19255	ENOG4105DHJ	ABC, transporter
BER93_19260	ENOG4105CY3	ABC transporter, permease
BER93_19265	ENOG4107PE3	Mammalian cell entry related domain protein
BER93_19280	ENOG410903C	(LipO)protein
BER93_19290	ENOG4108V06	Glutathione peroxidase
BER93_19300	ENOG4107QSV	RmuC domain protein
BER93_19310	ENOG4105CUB	amino acid
BER93_19320	ENOG4105BZU	Histidine kinase
BER93_19325	ENOG4105BZW	Glycerate kinase
BER93_19340	ENOG4105DR4	Methyltransferase
BER93_19345	ENOG4105DU1	integral membrane protein, terc
BER93_19370	ENOG4105DHW	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
BER93_19375	ENOG41067YR	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme (By similarity)
BER93_19405	ENOG4107QJE	Chromosome Partitioning Protein
BER93_19485	ENOG4108EHY	type IV secretion system
BER93_19500	ENOG4105E4C	Lytic transglycosylase catalytic
BER93_19510	ENOG4108C33	Resolvase
BER93_19575	ENOG4105C26	Dehydrogenase
BER93_19650	ENOG4108C33	Resolvase
BER93_19700	ENOG4108C33	Resolvase