locus-tag class description BI317_00005 PF12705 PD-(D/E)XK nuclease superfamily BI317_00005 PF00580 UvrD/REP helicase N-terminal domain BI317_00005 PF13361 UvrD-like helicase C-terminal domain BI317_00010 PF17946 RecC C-terminal domain BI317_00015 PF00005 ABC transporter BI317_00020 PF02405 Permease MlaE BI317_00025 PF02470 MlaD protein BI317_00030 PF05494 MlaC protein BI317_00040 PF04333 MlaA lipoprotein BI317_00055 PF05199 GMC oxidoreductase BI317_00055 PF00732 GMC oxidoreductase BI317_00065 PF00255 Glutathione peroxidase BI317_00075 PF02646 RmuC family BI317_00080 PF13417 Glutathione S-transferase, N-terminal domain BI317_00080 PF00043 Glutathione S-transferase, C-terminal domain BI317_00085 PF13520 Amino acid permease BI317_00090 PF07971 Glycosyl hydrolase family 92 BI317_00090 PF17678 Glycosyl hydrolase family 92 N-terminal domain BI317_00105 PF00990 Diguanylate cyclase, GGDEF domain BI317_00110 PF17853 GGDEF-like domain BI317_00110 PF05651 Putative sugar diacid recognition BI317_00110 PF13556 PucR C-terminal helix-turn-helix domain BI317_00115 PF02595 Glycerate kinase family BI317_00120 PF07690 Major Facilitator Superfamily BI317_00135 PF01804 Penicillin amidase BI317_00140 PF07715 TonB-dependent Receptor Plug Domain BI317_00140 PF00593 TonB dependent receptor BI317_00160 PF00005 ABC transporter BI317_00170 PF07687 Peptidase dimerisation domain BI317_00170 PF01546 Peptidase family M20/M25/M40 BI317_00175 PF00296 Luciferase-like monooxygenase BI317_00180 PF00296 Luciferase-like monooxygenase BI317_00190 PF00593 TonB dependent receptor BI317_00190 PF07715 TonB-dependent Receptor Plug Domain BI317_00195 PF01965 DJ-1/PfpI family BI317_00210 PF10672 S-adenosylmethionine-dependent methyltransferase BI317_00210 PF17785 PUA-like domain BI317_00220 PF03741 Integral membrane protein TerC family BI317_00235 PF01694 Rhomboid family BI317_00240 PF03009 Glycerophosphoryl diester phosphodiesterase family BI317_00255 PF01569 PAP2 superfamily BI317_00260 PF01926 50S ribosome-binding GTPase BI317_00260 PF12631 MnmE helical domain BI317_00260 PF10396 GTP-binding protein TrmE N-terminus BI317_00265 PF14849 YidC periplasmic domain BI317_00265 PF02096 60Kd inner membrane protein BI317_00270 PF00825 Ribonuclease P BI317_00275 PF00468 Ribosomal protein L34 BI317_00285 PF11638 DnaA N-terminal domain BI317_00285 PF00308 Bacterial dnaA protein BI317_00285 PF08299 Bacterial dnaA protein helix-turn-helix BI317_00290 PF02768 DNA polymerase III beta subunit, C-terminal domain BI317_00290 PF00712 DNA polymerase III beta subunit, N-terminal domain BI317_00290 PF02767 DNA polymerase III beta subunit, central domain BI317_00295 PF02463 RecF/RecN/SMC N terminal domain BI317_00300 PF18053 DNA gyrase B subunit insert domain BI317_00300 PF00204 DNA gyrase B BI317_00300 PF01751 Toprim domain BI317_00300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_00300 PF00986 DNA gyrase B subunit, carboxyl terminus BI317_00310 PF01435 Peptidase family M48 BI317_00320 PF03544 Gram-negative bacterial TonB protein C-terminal BI317_00325 PF01618 MotA/TolQ/ExbB proton channel family BI317_00330 PF02472 Biopolymer transport protein ExbD/TolR BI317_00335 PF02472 Biopolymer transport protein ExbD/TolR BI317_00345 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BI317_00355 PF13396 Phospholipase_D-nuclease N-terminal BI317_00355 PF13091 PLD-like domain BI317_00360 PF04055 Radical SAM superfamily BI317_00370 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BI317_00385 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BI317_00385 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BI317_00390 PF03572 Peptidase family S41 BI317_00390 PF13180 PDZ domain BI317_00395 PF01551 Peptidase family M23 BI317_00405 PF04389 Peptidase family M28 BI317_00415 PF00150 Cellulase (glycosyl hydrolase family 5) BI317_00425 PF00150 Cellulase (glycosyl hydrolase family 5) BI317_00430 PF00150 Cellulase (glycosyl hydrolase family 5) BI317_00435 PF00150 Cellulase (glycosyl hydrolase family 5) BI317_00440 PF08240 Alcohol dehydrogenase GroES-like domain BI317_00440 PF00107 Zinc-binding dehydrogenase BI317_00450 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI317_00450 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BI317_00455 PF01493 GXGXG motif BI317_00455 PF04898 Glutamate synthase central domain BI317_00455 PF00310 Glutamine amidotransferases class-II BI317_00455 PF01645 Conserved region in glutamate synthase BI317_00485 PF02525 Flavodoxin-like fold BI317_00490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI317_00490 PF03466 LysR substrate binding domain BI317_00500 PF10091 Putative glucoamylase BI317_00500 PF06165 Glycosyltransferase family 36 BI317_00500 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain BI317_00530 PF01638 HxlR-like helix-turn-helix BI317_00610 PF00271 Helicase conserved C-terminal domain BI317_00610 PF09369 Domain of unknown function (DUF1998) BI317_00610 PF00270 DEAD/DEAH box helicase BI317_00620 PF03006 Haemolysin-III related BI317_00665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI317_00665 PF03466 LysR substrate binding domain BI317_00685 PF02525 Flavodoxin-like fold BI317_00690 PF09722 Protein of unknown function (DUF2384) BI317_00690 PF01936 NYN domain BI317_00700 PF01638 HxlR-like helix-turn-helix BI317_00715 PF01609 Transposase DDE domain BI317_00715 PF05598 Transposase domain (DUF772) BI317_00725 PF01527 Transposase BI317_00745 PF05532 CsbD-like BI317_00770 PF16485 Protealysin propeptide BI317_00770 PF01447 Thermolysin metallopeptidase, catalytic domain BI317_00770 PF02868 Thermolysin metallopeptidase, alpha-helical domain BI317_00780 PF09297 NADH pyrophosphatase zinc ribbon domain BI317_00780 PF00293 NUDIX domain BI317_00785 PF07859 alpha/beta hydrolase fold BI317_00795 PF00085 Thioredoxin BI317_00800 PF00083 Sugar (and other) transporter BI317_00800 PF08946 Osmosensory transporter coiled coil BI317_00895 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BI317_00900 PF00155 Aminotransferase class I and II BI317_00905 PF07715 TonB-dependent Receptor Plug Domain BI317_00905 PF00593 TonB dependent receptor BI317_00915 PF07883 Cupin domain BI317_00925 PF00171 Aldehyde dehydrogenase family BI317_00930 PF00107 Zinc-binding dehydrogenase BI317_00930 PF08240 Alcohol dehydrogenase GroES-like domain BI317_00945 PF02735 Ku70/Ku80 beta-barrel domain BI317_00950 PF04679 ATP dependent DNA ligase C terminal region BI317_00950 PF01068 ATP dependent DNA ligase domain BI317_00950 PF13298 DNA polymerase Ligase (LigD) BI317_00965 PF01070 FMN-dependent dehydrogenase BI317_00980 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family BI317_00985 PF07730 Histidine kinase BI317_00990 PF00072 Response regulator receiver domain BI317_00990 PF00196 Bacterial regulatory proteins, luxR family BI317_01005 PF00486 Transcriptional regulatory protein, C terminal BI317_01005 PF18500 CadC C-terminal domain 1 BI317_01010 PF07055 Enoyl reductase FAD binding domain BI317_01010 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase BI317_01010 PF12241 Trans-2-enoyl-CoA reductase catalytic region BI317_01020 PF00294 pfkB family carbohydrate kinase BI317_01025 PF00593 TonB dependent receptor BI317_01025 PF07715 TonB-dependent Receptor Plug Domain BI317_01035 PF01095 Pectinesterase BI317_01070 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BI317_01090 PF00849 RNA pseudouridylate synthase BI317_01155 PF07804 HipA-like C-terminal domain BI317_01155 PF13657 HipA N-terminal domain BI317_01205 PF13396 Phospholipase_D-nuclease N-terminal BI317_01205 PF13091 PLD-like domain BI317_01215 PF00106 short chain dehydrogenase BI317_01220 PF03466 LysR substrate binding domain BI317_01220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI317_01225 PF00083 Sugar (and other) transporter BI317_01230 PF04632 Fusaric acid resistance protein family BI317_01235 PF02321 Outer membrane efflux protein BI317_01240 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI317_01240 PF00529 HlyD membrane-fusion protein of T1SS BI317_01245 PF07869 Protein of unknown function (DUF1656) BI317_01255 PF01227 GTP cyclohydrolase I BI317_01280 PF07715 TonB-dependent Receptor Plug Domain BI317_01280 PF00593 TonB dependent receptor BI317_01285 PF01925 Sulfite exporter TauE/SafE BI317_01290 PF02810 SEC-C motif BI317_01300 PF01263 Aldose 1-epimerase BI317_01305 PF07690 Major Facilitator Superfamily BI317_01310 PF01126 Heme oxygenase BI317_01315 PF08446 PAS fold BI317_01315 PF01590 GAF domain BI317_01315 PF13426 PAS domain BI317_01315 PF00360 Phytochrome region BI317_01350 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BI317_01350 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BI317_01350 PF06827 Zinc finger found in FPG and IleRS BI317_01360 PF04349 Periplasmic glucan biosynthesis protein, MdoG BI317_01365 PF01590 GAF domain BI317_01365 PF00360 Phytochrome region BI317_01365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_01365 PF08446 PAS fold BI317_01365 PF00512 His Kinase A (phospho-acceptor) domain BI317_01370 PF00265 Thymidine kinase BI317_01375 PF00580 UvrD/REP helicase N-terminal domain BI317_01375 PF13361 UvrD-like helicase C-terminal domain BI317_01380 PF13302 Acetyltransferase (GNAT) domain BI317_01395 PF04337 Protein of unknown function, DUF480 BI317_01400 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) BI317_01405 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BI317_01410 PF04820 Tryptophan halogenase BI317_01420 PF00356 Bacterial regulatory proteins, lacI family BI317_01430 PF01553 Acyltransferase BI317_01435 PF16197 Ketoacyl-synthetase C-terminal extension BI317_01435 PF00698 Acyl transferase domain BI317_01435 PF02801 Beta-ketoacyl synthase, C-terminal domain BI317_01435 PF08659 KR domain BI317_01435 PF00550 Phosphopantetheine attachment site BI317_01435 PF08240 Alcohol dehydrogenase GroES-like domain BI317_01435 PF00109 Beta-ketoacyl synthase, N-terminal domain BI317_01435 PF00107 Zinc-binding dehydrogenase BI317_01435 PF14765 Polyketide synthase dehydratase BI317_01470 PF04616 Glycosyl hydrolases family 43 BI317_01490 PF03422 Carbohydrate binding module (family 6) BI317_01490 PF00553 Cellulose binding domain BI317_01490 PF00331 Glycosyl hydrolase family 10 BI317_01495 PF02614 Glucuronate isomerase BI317_01500 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 BI317_01500 PF00703 Glycosyl hydrolases family 2 BI317_01500 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BI317_01500 PF02837 Glycosyl hydrolases family 2, sugar binding domain BI317_01500 PF16355 Domain of unknown function (DUF4982) BI317_01505 PF00331 Glycosyl hydrolase family 10 BI317_01510 PF08450 SMP-30/Gluconolactonase/LRE-like region BI317_01520 PF02652 L-lactate permease BI317_01525 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BI317_01525 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BI317_01550 PF08125 Mannitol dehydrogenase C-terminal domain BI317_01550 PF01232 Mannitol dehydrogenase Rossmann domain BI317_01555 PF07691 PA14 domain BI317_01555 PF00933 Glycosyl hydrolase family 3 N terminal domain BI317_01555 PF14310 Fibronectin type III-like domain BI317_01555 PF01915 Glycosyl hydrolase family 3 C-terminal domain BI317_01560 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BI317_01560 PF04616 Glycosyl hydrolases family 43 BI317_01565 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BI317_01565 PF13378 Enolase C-terminal domain-like BI317_01580 PF00356 Bacterial regulatory proteins, lacI family BI317_01590 PF01171 PP-loop family BI317_01595 PF04381 Putative exonuclease, RdgC BI317_01610 PF12697 Alpha/beta hydrolase family BI317_01615 PF00762 Ferrochelatase BI317_01625 PF02416 mttA/Hcf106 family BI317_01630 PF02416 mttA/Hcf106 family BI317_01635 PF00902 Sec-independent protein translocase protein (TatC) BI317_01645 PF00958 GMP synthase C terminal domain BI317_01645 PF00117 Glutamine amidotransferase class-I BI317_01660 PF00437 Type II/IV secretion system protein BI317_01660 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BI317_01665 PF02091 Glycyl-tRNA synthetase alpha subunit BI317_01670 PF05746 DALR anticodon binding domain BI317_01670 PF02092 Glycyl-tRNA synthetase beta subunit BI317_01675 PF17243 POTRA domain TamA domain 1 BI317_01675 PF01103 Surface antigen BI317_01680 PF04357 TamB, inner membrane protein subunit of TAM complex BI317_01715 PF13360 PQQ-like domain BI317_01715 PF13570 PQQ-like domain BI317_01715 PF01011 PQQ enzyme repeat BI317_01730 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain BI317_01730 PF06165 Glycosyltransferase family 36 BI317_01740 PF00512 His Kinase A (phospho-acceptor) domain BI317_01740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_01745 PF02659 Putative manganese efflux pump BI317_01760 PF09339 IclR helix-turn-helix domain BI317_01760 PF01614 Bacterial transcriptional regulator BI317_01765 PF07690 Major Facilitator Superfamily BI317_01770 PF05336 L-rhamnose mutarotase BI317_01775 PF13378 Enolase C-terminal domain-like BI317_01775 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BI317_01795 PF00248 Aldo/keto reductase family BI317_01840 PF00196 Bacterial regulatory proteins, luxR family BI317_01840 PF00072 Response regulator receiver domain BI317_01845 PF16177 Acetyl-coenzyme A synthetase N-terminus BI317_01845 PF13193 AMP-binding enzyme C-terminal domain BI317_01845 PF00501 AMP-binding enzyme BI317_01855 PF04341 Protein of unknown function, DUF485 BI317_01860 PF00474 Sodium:solute symporter family BI317_01880 PF00639 PPIC-type PPIASE domain BI317_01890 PF00480 ROK family BI317_01905 PF03372 Endonuclease/Exonuclease/phosphatase family BI317_01915 PF04226 Transglycosylase associated protein BI317_01920 PF01648 4'-phosphopantetheinyl transferase superfamily BI317_01925 PF09423 PhoD-like phosphatase BI317_01925 PF16655 PhoD-like phosphatase, N-terminal domain BI317_01930 PF16655 PhoD-like phosphatase, N-terminal domain BI317_01930 PF09423 PhoD-like phosphatase BI317_01940 PF02527 rRNA small subunit methyltransferase G BI317_01965 PF13533 Biotin-lipoyl like BI317_01970 PF00873 AcrB/AcrD/AcrF family BI317_01975 PF00830 Ribosomal L28 family BI317_01980 PF00471 Ribosomal protein L33 BI317_01985 PF04909 Amidohydrolase BI317_01990 PF04303 PrpF protein BI317_01995 PF03737 Aldolase/RraA BI317_02000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI317_02000 PF03466 LysR substrate binding domain BI317_02005 PF13091 PLD-like domain BI317_02005 PF13396 Phospholipase_D-nuclease N-terminal BI317_02020 PF00580 UvrD/REP helicase N-terminal domain BI317_02020 PF13361 UvrD-like helicase C-terminal domain BI317_02030 PF12464 Maltose acetyltransferase BI317_02030 PF14602 Hexapeptide repeat of succinyl-transferase BI317_02065 PF03793 PASTA domain BI317_02065 PF00069 Protein kinase domain BI317_02075 PF01367 5'-3' exonuclease, C-terminal SAM fold BI317_02075 PF00476 DNA polymerase family A BI317_02075 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BI317_02075 PF01612 3'-5' exonuclease BI317_02080 PF01218 Coproporphyrinogen III oxidase BI317_02110 PF00501 AMP-binding enzyme BI317_02110 PF13193 AMP-binding enzyme C-terminal domain BI317_02120 PF04820 Tryptophan halogenase BI317_02125 PF00550 Phosphopantetheine attachment site BI317_02135 PF01553 Acyltransferase BI317_02140 PF07977 FabA-like domain BI317_02195 PF04820 Tryptophan halogenase BI317_02210 PF00109 Beta-ketoacyl synthase, N-terminal domain BI317_02210 PF02801 Beta-ketoacyl synthase, C-terminal domain BI317_02215 PF05166 YcgL domain BI317_02230 PF00723 Glycosyl hydrolases family 15 BI317_02235 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BI317_02235 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BI317_02240 PF00999 Sodium/hydrogen exchanger family BI317_02240 PF02254 TrkA-N domain BI317_02250 PF03448 MgtE intracellular N domain BI317_02250 PF01769 Divalent cation transporter BI317_02250 PF00571 CBS domain BI317_02255 PF00593 TonB dependent receptor BI317_02255 PF07715 TonB-dependent Receptor Plug Domain BI317_02255 PF04886 PT repeat BI317_02270 PF00583 Acetyltransferase (GNAT) family BI317_02270 PF13607 Succinyl-CoA ligase like flavodoxin domain BI317_02270 PF13380 CoA binding domain BI317_02290 PF00317 Ribonucleotide reductase, all-alpha domain BI317_02290 PF02867 Ribonucleotide reductase, barrel domain BI317_02290 PF03477 ATP cone domain BI317_02300 PF00268 Ribonucleotide reductase, small chain BI317_02315 PF03061 Thioesterase superfamily BI317_02335 PF08546 Ketopantoate reductase PanE/ApbA C terminal BI317_02335 PF02558 Ketopantoate reductase PanE/ApbA BI317_02345 PF01061 ABC-2 type transporter BI317_02350 PF00005 ABC transporter BI317_02355 PF00970 Oxidoreductase FAD-binding domain BI317_02355 PF01383 CpcD/allophycocyanin linker domain BI317_02355 PF00175 Oxidoreductase NAD-binding domain BI317_02360 PF01545 Cation efflux family BI317_02365 PF02583 Metal-sensitive transcriptional repressor BI317_02370 PF01229 Glycosyl hydrolases family 39 BI317_02380 PF01381 Helix-turn-helix BI317_02390 PF00005 ABC transporter BI317_02405 PF04820 Tryptophan halogenase BI317_02425 PF00043 Glutathione S-transferase, C-terminal domain BI317_02425 PF02798 Glutathione S-transferase, N-terminal domain BI317_02430 PF00326 Prolyl oligopeptidase family BI317_02430 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region BI317_02460 PF00490 Delta-aminolevulinic acid dehydratase BI317_02465 PF00175 Oxidoreductase NAD-binding domain BI317_02465 PF00258 Flavodoxin BI317_02465 PF00667 FAD binding domain BI317_02470 PF13340 Putative transposase of IS4/5 family (DUF4096) BI317_02495 PF01488 Shikimate / quinate 5-dehydrogenase BI317_02495 PF08501 Shikimate dehydrogenase substrate binding domain BI317_02495 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BI317_02510 PF06733 DEAD_2 BI317_02510 PF13307 Helicase C-terminal domain BI317_02520 PF00199 Catalase BI317_02520 PF06628 Catalase-related immune-responsive BI317_02535 PF01207 Dihydrouridine synthase (Dus) BI317_02545 PF00072 Response regulator receiver domain BI317_02545 PF00486 Transcriptional regulatory protein, C terminal BI317_02550 PF00512 His Kinase A (phospho-acceptor) domain BI317_02550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_02550 PF00672 HAMP domain BI317_02565 PF06167 Glucose-regulated metallo-peptidase M90 BI317_02575 PF02237 Biotin protein ligase C terminal domain BI317_02575 PF08279 HTH domain BI317_02575 PF03099 Biotin/lipoate A/B protein ligase family BI317_02580 PF03309 Type III pantothenate kinase BI317_02595 PF02223 Thymidylate kinase BI317_02620 PF00491 Arginase family BI317_02635 PF05532 CsbD-like BI317_02640 PF00579 tRNA synthetases class I (W and Y) BI317_02645 PF00753 Metallo-beta-lactamase superfamily BI317_02680 PF00892 EamA-like transporter family BI317_02685 PF00892 EamA-like transporter family BI317_02705 PF00005 ABC transporter BI317_02710 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI317_02715 PF07730 Histidine kinase BI317_02720 PF00196 Bacterial regulatory proteins, luxR family BI317_02720 PF00072 Response regulator receiver domain BI317_02745 PF00883 Cytosol aminopeptidase family, catalytic domain BI317_02745 PF02789 Cytosol aminopeptidase family, N-terminal domain BI317_02750 PF13419 Haloacid dehalogenase-like hydrolase BI317_02755 PF01594 AI-2E family transporter BI317_02775 PF00595 PDZ domain BI317_02775 PF13180 PDZ domain BI317_02795 PF08521 Two-component sensor kinase N-terminal BI317_02795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_02795 PF00512 His Kinase A (phospho-acceptor) domain BI317_02805 PF08338 Domain of unknown function (DUF1731) BI317_02805 PF01370 NAD dependent epimerase/dehydratase family BI317_02840 PF00440 Bacterial regulatory proteins, tetR family BI317_02845 PF00111 2Fe-2S iron-sulfur cluster binding domain BI317_02845 PF00970 Oxidoreductase FAD-binding domain BI317_02845 PF00175 Oxidoreductase NAD-binding domain BI317_02850 PF00487 Fatty acid desaturase BI317_02855 PF00563 EAL domain BI317_02855 PF12792 CSS motif domain associated with EAL BI317_02870 PF01078 Magnesium chelatase, subunit ChlI BI317_02870 PF13335 Magnesium chelatase, subunit ChlI C-terminal BI317_02875 PF04380 Membrane fusogenic activity BI317_02880 PF00543 Nitrogen regulatory protein P-II BI317_02905 PF17284 Spermidine synthase tetramerisation domain BI317_02910 PF17810 Arginine decarboxylase helical bundle domain BI317_02910 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BI317_02910 PF17944 Arginine decarboxylase C-terminal helical extension BI317_02915 PF00668 Condensation domain BI317_02915 PF00550 Phosphopantetheine attachment site BI317_02915 PF00501 AMP-binding enzyme BI317_02915 PF00975 Thioesterase domain BI317_02915 PF13193 AMP-binding enzyme C-terminal domain BI317_02920 PF03033 Glycosyltransferase family 28 N-terminal domain BI317_02925 PF01757 Acyltransferase family BI317_02930 PF00106 short chain dehydrogenase BI317_02940 PF00750 tRNA synthetases class I (R) BI317_02940 PF03485 Arginyl tRNA synthetase N terminal domain BI317_02940 PF05746 DALR anticodon binding domain BI317_02945 PF04002 RadC-like JAB domain BI317_02950 PF02441 Flavoprotein BI317_02950 PF04127 DNA / pantothenate metabolism flavoprotein BI317_02955 PF00692 dUTPase BI317_02960 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BI317_02960 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BI317_02960 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BI317_02960 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BI317_02975 PF00535 Glycosyl transferase family 2 BI317_02980 PF01370 NAD dependent epimerase/dehydratase family BI317_02990 PF17762 HTH domain found in ParB protein BI317_02990 PF02195 ParB-like nuclease domain BI317_02995 PF13614 AAA domain BI317_03005 PF00156 Phosphoribosyl transferase domain BI317_03010 PF03372 Endonuclease/Exonuclease/phosphatase family BI317_03015 PF07690 Major Facilitator Superfamily BI317_03025 PF03702 Anhydro-N-acetylmuramic acid kinase BI317_03030 PF04225 Opacity-associated protein A LysM-like domain BI317_03030 PF01551 Peptidase family M23 BI317_03035 PF00579 tRNA synthetases class I (W and Y) BI317_03065 PF01619 Proline dehydrogenase BI317_03065 PF14850 DNA-binding domain of Proline dehydrogenase BI317_03065 PF00171 Aldehyde dehydrogenase family BI317_03065 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BI317_03075 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BI317_03075 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BI317_03080 PF00115 Cytochrome C and Quinol oxidase polypeptide I BI317_03085 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 BI317_03090 PF00510 Cytochrome c oxidase subunit III BI317_03115 PF01040 UbiA prenyltransferase family BI317_03125 PF13593 SBF-like CPA transporter family (DUF4137) BI317_03130 PF10410 DnaB-helicase binding domain of primase BI317_03130 PF08278 DNA primase DnaG DnaB-binding BI317_03130 PF01807 CHC2 zinc finger BI317_03130 PF08275 DNA primase catalytic core, N-terminal domain BI317_03135 PF03631 Virulence factor BrkB BI317_03140 PF09424 Yqey-like protein BI317_03145 PF01165 Ribosomal protein S21 BI317_03150 PF00814 Glycoprotease family BI317_03155 PF02152 Dihydroneopterin aldolase BI317_03160 PF00933 Glycosyl hydrolase family 3 N terminal domain BI317_03160 PF01915 Glycosyl hydrolase family 3 C-terminal domain BI317_03160 PF14310 Fibronectin type III-like domain BI317_03170 PF13340 Putative transposase of IS4/5 family (DUF4096) BI317_03175 PF07995 Glucose / Sorbosone dehydrogenase BI317_03180 PF05360 yiaA/B two helix domain BI317_03195 PF13520 Amino acid permease BI317_03210 PF07063 Domain of unknown function (DUF1338) BI317_03250 PF01427 D-ala-D-ala dipeptidase BI317_03255 PF01510 N-acetylmuramoyl-L-alanine amidase BI317_03265 PF13378 Enolase C-terminal domain-like BI317_03265 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BI317_03275 PF00873 AcrB/AcrD/AcrF family BI317_03280 PF00873 AcrB/AcrD/AcrF family BI317_03285 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI317_03290 PF07687 Peptidase dimerisation domain BI317_03290 PF01546 Peptidase family M20/M25/M40 BI317_03295 PF14489 QueF-like protein BI317_03295 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term BI317_03310 PF03971 Monomeric isocitrate dehydrogenase BI317_03325 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) BI317_03345 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BI317_03345 PF07497 Rho termination factor, RNA-binding domain BI317_03345 PF07498 Rho termination factor, N-terminal domain BI317_03350 PF00085 Thioredoxin BI317_03355 PF00270 DEAD/DEAH box helicase BI317_03355 PF00271 Helicase conserved C-terminal domain BI317_03355 PF12300 ATP-dependent RNA helicase RhlB BI317_03360 PF00005 ABC transporter BI317_03365 PF18075 FtsX extracellular domain BI317_03370 PF00072 Response regulator receiver domain BI317_03370 PF01339 CheB methylesterase BI317_03375 PF03167 Uracil DNA glycosylase superfamily BI317_03380 PF04542 Sigma-70 region 2 BI317_03380 PF04545 Sigma-70, region 4 BI317_03385 PF03458 UPF0126 domain BI317_03405 PF13417 Glutathione S-transferase, N-terminal domain BI317_03405 PF00043 Glutathione S-transferase, C-terminal domain BI317_03410 PF13340 Putative transposase of IS4/5 family (DUF4096) BI317_03420 PF18074 Primosomal protein N C-terminal domain BI317_03420 PF17764 3′ DNA-binding domain (3′BD) BI317_03420 PF00271 Helicase conserved C-terminal domain BI317_03420 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BI317_03420 PF00270 DEAD/DEAH box helicase BI317_03435 PF01554 MatE BI317_03440 PF01343 Peptidase family S49 BI317_03465 PF01300 Telomere recombination BI317_03470 PF01131 DNA topoisomerase BI317_03470 PF01751 Toprim domain BI317_03470 PF13368 Topoisomerase C-terminal repeat BI317_03480 PF07963 Prokaryotic N-terminal methylation motif BI317_03480 PF00114 Pilin (bacterial filament) BI317_03485 PF04361 Protein of unknown function (DUF494) BI317_03490 PF02481 DNA recombination-mediator protein A BI317_03490 PF17782 DprA winged helix domain BI317_03495 PF01476 LysM domain BI317_03500 PF01327 Polypeptide deformylase BI317_03505 PF02911 Formyl transferase, C-terminal domain BI317_03505 PF00551 Formyl transferase BI317_03510 PF01029 NusB family BI317_03510 PF01189 16S rRNA methyltransferase RsmB/F BI317_03525 PF00535 Glycosyl transferase family 2 BI317_03550 PF00925 GTP cyclohydrolase II BI317_03560 PF03279 Bacterial lipid A biosynthesis acyltransferase BI317_03565 PF02580 D-Tyr-tRNA(Tyr) deacylase BI317_03570 PF04545 Sigma-70, region 4 BI317_03570 PF04539 Sigma-70 region 3 BI317_03570 PF00140 Sigma-70 factor, region 1.2 BI317_03570 PF03979 Sigma-70 factor, region 1.1 BI317_03570 PF04542 Sigma-70 region 2 BI317_03570 PF04546 Sigma-70, non-essential region BI317_03585 PF00589 Phage integrase family BI317_03590 PF01609 Transposase DDE domain BI317_03590 PF05598 Transposase domain (DUF772) BI317_03615 PF13677 Membrane MotB of proton-channel complex MotA/MotB BI317_03615 PF00691 OmpA family BI317_03620 PF01618 MotA/TolQ/ExbB proton channel family BI317_03635 PF01641 SelR domain BI317_03645 PF01037 Lrp/AsnC ligand binding domain BI317_03650 PF01266 FAD dependent oxidoreductase BI317_03655 PF00842 Alanine racemase, C-terminal domain BI317_03655 PF01168 Alanine racemase, N-terminal domain BI317_03675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_03675 PF00512 His Kinase A (phospho-acceptor) domain BI317_03675 PF00072 Response regulator receiver domain BI317_03675 PF00497 Bacterial extracellular solute-binding proteins, family 3 BI317_03685 PF07995 Glucose / Sorbosone dehydrogenase BI317_03700 PF08468 Methyltransferase small domain N-terminal BI317_03700 PF05175 Methyltransferase small domain BI317_03705 PF01479 S4 domain BI317_03705 PF00849 RNA pseudouridylate synthase BI317_03725 PF04461 Protein of unknown function (DUF520) BI317_03730 PF00892 EamA-like transporter family BI317_03735 PF00005 ABC transporter BI317_03735 PF09383 NIL domain BI317_03740 PF00528 Binding-protein-dependent transport system inner membrane component BI317_03745 PF03180 NLPA lipoprotein BI317_03770 PF00364 Biotin-requiring enzyme BI317_03770 PF02817 e3 binding domain BI317_03770 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BI317_03780 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI317_03780 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BI317_03795 PF00119 ATP synthase A chain BI317_03800 PF00137 ATP synthase subunit C BI317_03805 PF00430 ATP synthase B/B' CF(0) BI317_03810 PF00213 ATP synthase delta (OSCP) subunit BI317_03815 PF02874 ATP synthase alpha/beta family, beta-barrel domain BI317_03815 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BI317_03815 PF00306 ATP synthase alpha/beta chain, C terminal domain BI317_03820 PF00231 ATP synthase BI317_03825 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BI317_03825 PF02874 ATP synthase alpha/beta family, beta-barrel domain BI317_03830 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BI317_03830 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BI317_03835 PF01817 Chorismate mutase type II BI317_03845 PF00132 Bacterial transferase hexapeptide (six repeats) BI317_03845 PF12804 MobA-like NTP transferase domain BI317_03845 PF14602 Hexapeptide repeat of succinyl-transferase BI317_03855 PF13340 Putative transposase of IS4/5 family (DUF4096) BI317_03865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_03865 PF00512 His Kinase A (phospho-acceptor) domain BI317_03870 PF02954 Bacterial regulatory protein, Fis family BI317_03870 PF00072 Response regulator receiver domain BI317_03870 PF00158 Sigma-54 interaction domain BI317_03875 PF02687 FtsX-like permease family BI317_03875 PF12704 MacB-like periplasmic core domain BI317_03880 PF02687 FtsX-like permease family BI317_03880 PF00005 ABC transporter BI317_03880 PF12704 MacB-like periplasmic core domain BI317_03885 PF00005 ABC transporter BI317_03895 PF01380 SIS domain BI317_03900 PF00027 Cyclic nucleotide-binding domain BI317_03900 PF13545 Crp-like helix-turn-helix domain BI317_03920 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BI317_03925 PF05275 Copper resistance protein B precursor (CopB) BI317_03930 PF07732 Multicopper oxidase BI317_03930 PF07731 Multicopper oxidase BI317_03930 PF00394 Multicopper oxidase BI317_03945 PF01432 Peptidase family M3 BI317_03955 PF02801 Beta-ketoacyl synthase, C-terminal domain BI317_03955 PF00109 Beta-ketoacyl synthase, N-terminal domain BI317_03960 PF07977 FabA-like domain BI317_03965 PF00817 impB/mucB/samB family BI317_03965 PF11799 impB/mucB/samB family C-terminal domain BI317_03970 PF13419 Haloacid dehalogenase-like hydrolase BI317_03975 PF07715 TonB-dependent Receptor Plug Domain BI317_03975 PF00593 TonB dependent receptor BI317_03980 PF00756 Putative esterase BI317_03990 PF13185 GAF domain BI317_04005 PF01242 6-pyruvoyl tetrahydropterin synthase BI317_04010 PF00593 TonB dependent receptor BI317_04010 PF07715 TonB-dependent Receptor Plug Domain BI317_04020 PF00270 DEAD/DEAH box helicase BI317_04020 PF00271 Helicase conserved C-terminal domain BI317_04035 PF14497 Glutathione S-transferase, C-terminal domain BI317_04035 PF02798 Glutathione S-transferase, N-terminal domain BI317_04040 PF00437 Type II/IV secretion system protein BI317_04060 PF00571 CBS domain BI317_04060 PF00291 Pyridoxal-phosphate dependent enzyme BI317_04080 PF00005 ABC transporter BI317_04085 PF13847 Methyltransferase domain BI317_04085 PF00069 Protein kinase domain BI317_04090 PF13439 Glycosyltransferase Family 4 BI317_04090 PF00534 Glycosyl transferases group 1 BI317_04105 PF16363 GDP-mannose 4,6 dehydratase BI317_04110 PF16363 GDP-mannose 4,6 dehydratase BI317_04130 PF00535 Glycosyl transferase family 2 BI317_04135 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BI317_04145 PF00766 Electron transfer flavoprotein FAD-binding domain BI317_04145 PF01012 Electron transfer flavoprotein domain BI317_04150 PF01012 Electron transfer flavoprotein domain BI317_04155 PF16363 GDP-mannose 4,6 dehydratase BI317_04160 PF00483 Nucleotidyl transferase BI317_04165 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BI317_04170 PF04321 RmlD substrate binding domain BI317_04175 PF00483 Nucleotidyl transferase BI317_04175 PF01050 Mannose-6-phosphate isomerase BI317_04180 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BI317_04180 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BI317_04180 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BI317_04180 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BI317_04185 PF01144 Coenzyme A transferase BI317_04190 PF01144 Coenzyme A transferase BI317_04200 PF14307 Glycosyltransferase WbsX BI317_04200 PF05045 Rhamnan synthesis protein F BI317_04225 PF03886 ABC-type transport auxiliary lipoprotein component BI317_04225 PF02470 MlaD protein BI317_04230 PF00005 ABC transporter BI317_04235 PF02405 Permease MlaE BI317_04250 PF03129 Anticodon binding domain BI317_04250 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BI317_04250 PF04073 Aminoacyl-tRNA editing domain BI317_04260 PF01066 CDP-alcohol phosphatidyltransferase BI317_04280 PF00544 Pectate lyase BI317_04290 PF08264 Anticodon-binding domain of tRNA BI317_04290 PF10458 Valyl tRNA synthetase tRNA binding arm BI317_04290 PF00133 tRNA synthetases class I (I, L, M and V) BI317_04300 PF02789 Cytosol aminopeptidase family, N-terminal domain BI317_04300 PF00883 Cytosol aminopeptidase family, catalytic domain BI317_04310 PF03739 Lipopolysaccharide export system permease LptF/LptG BI317_04325 PF02899 Phage integrase, N-terminal SAM-like domain BI317_04325 PF00589 Phage integrase family BI317_04330 PF13098 Thioredoxin-like domain BI317_04330 PF10411 Disulfide bond isomerase protein N-terminus BI317_04335 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BI317_04335 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal BI317_04335 PF02769 AIR synthase related protein, C-terminal domain BI317_04340 PF13018 Extended Signal Peptide of Type V secretion system BI317_04340 PF03895 YadA-like membrane anchor domain BI317_04340 PF05658 Head domain of trimeric autotransporter adhesin BI317_04340 PF05662 Coiled stalk of trimeric autotransporter adhesin BI317_04345 PF00082 Subtilase family BI317_04345 PF04151 Bacterial pre-peptidase C-terminal domain BI317_04350 PF03895 YadA-like membrane anchor domain BI317_04350 PF13018 Extended Signal Peptide of Type V secretion system BI317_04350 PF05662 Coiled stalk of trimeric autotransporter adhesin BI317_04350 PF05658 Head domain of trimeric autotransporter adhesin BI317_04355 PF04151 Bacterial pre-peptidase C-terminal domain BI317_04355 PF00082 Subtilase family BI317_04360 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BI317_04360 PF00437 Type II/IV secretion system protein BI317_04365 PF00482 Type II secretion system (T2SS), protein F BI317_04370 PF08334 Type II secretion system (T2SS), protein G BI317_04375 PF12019 Type II transport protein GspH BI317_04380 PF07963 Prokaryotic N-terminal methylation motif BI317_04390 PF03934 Type II secretion system (T2SS), protein K BI317_04395 PF05137 Fimbrial assembly protein (PilN) BI317_04400 PF10741 Type II secretion system (T2SS), protein M subtype b BI317_04410 PF00263 Bacterial type II and III secretion system protein BI317_04410 PF03958 Bacterial type II/III secretion system short domain BI317_04455 PF00392 Bacterial regulatory proteins, gntR family BI317_04455 PF07702 UTRA domain BI317_04465 PF07715 TonB-dependent Receptor Plug Domain BI317_04465 PF00593 TonB dependent receptor BI317_04500 PF13340 Putative transposase of IS4/5 family (DUF4096) BI317_04510 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BI317_04510 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BI317_04525 PF01327 Polypeptide deformylase BI317_04530 PF00005 ABC transporter BI317_04530 PF12848 ABC transporter BI317_04540 PF00464 Serine hydroxymethyltransferase BI317_04545 PF03477 ATP cone domain BI317_04555 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BI317_04555 PF01872 RibD C-terminal domain BI317_04570 PF00677 Lumazine binding domain BI317_04575 PF00925 GTP cyclohydrolase II BI317_04575 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BI317_04585 PF00885 6,7-dimethyl-8-ribityllumazine synthase BI317_04590 PF01029 NusB family BI317_04595 PF02769 AIR synthase related protein, C-terminal domain BI317_04595 PF00586 AIR synthase related protein, N-terminal domain BI317_04620 PF03814 Potassium-transporting ATPase A subunit BI317_04630 PF02669 K+-transporting ATPase, c chain BI317_04635 PF02702 Osmosensitive K+ channel His kinase sensor domain BI317_04635 PF00512 His Kinase A (phospho-acceptor) domain BI317_04635 PF13493 Domain of unknown function (DUF4118) BI317_04635 PF13492 GAF domain BI317_04635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_04640 PF00486 Transcriptional regulatory protein, C terminal BI317_04640 PF00072 Response regulator receiver domain BI317_04645 PF01565 FAD binding domain BI317_04645 PF02913 FAD linked oxidases, C-terminal domain BI317_04650 PF04307 LexA-binding, inner membrane-associated putative hydrolase BI317_04655 PF02021 Uncharacterised protein family UPF0102 BI317_04665 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BI317_04690 PF02381 MraZ protein, putative antitoxin-like BI317_04695 PF01795 MraW methylase family BI317_04700 PF04999 Cell division protein FtsL BI317_04705 PF03717 Penicillin-binding Protein dimerisation domain BI317_04705 PF00905 Penicillin binding protein transpeptidase domain BI317_04710 PF08245 Mur ligase middle domain BI317_04710 PF02875 Mur ligase family, glutamate ligase domain BI317_04710 PF01225 Mur ligase family, catalytic domain BI317_04715 PF08245 Mur ligase middle domain BI317_04715 PF01225 Mur ligase family, catalytic domain BI317_04715 PF02875 Mur ligase family, glutamate ligase domain BI317_04720 PF00953 Glycosyl transferase family 4 BI317_04725 PF01098 Cell cycle protein BI317_04730 PF04101 Glycosyltransferase family 28 C-terminal domain BI317_04730 PF03033 Glycosyltransferase family 28 N-terminal domain BI317_04735 PF01225 Mur ligase family, catalytic domain BI317_04735 PF02875 Mur ligase family, glutamate ligase domain BI317_04735 PF08245 Mur ligase middle domain BI317_04740 PF01820 D-ala D-ala ligase N-terminus BI317_04740 PF07478 D-ala D-ala ligase C-terminus BI317_04745 PF08478 POTRA domain, FtsQ-type BI317_04745 PF03799 Cell division protein FtsQ BI317_04750 PF02491 SHS2 domain inserted in FTSA BI317_04755 PF00091 Tubulin/FtsZ family, GTPase domain BI317_04755 PF12327 FtsZ family, C-terminal domain BI317_04760 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BI317_04770 PF01476 LysM domain BI317_04770 PF01551 Peptidase family M23 BI317_04770 PF08525 Opacity-associated protein A N-terminal motif BI317_04775 PF01043 SecA preprotein cross-linking domain BI317_04775 PF07516 SecA Wing and Scaffold domain BI317_04775 PF07517 SecA DEAD-like domain BI317_04775 PF02810 SEC-C motif BI317_04785 PF00293 NUDIX domain BI317_04805 PF02219 Methylenetetrahydrofolate reductase BI317_04815 PF00107 Zinc-binding dehydrogenase BI317_04815 PF02801 Beta-ketoacyl synthase, C-terminal domain BI317_04815 PF08659 KR domain BI317_04815 PF00550 Phosphopantetheine attachment site BI317_04815 PF08240 Alcohol dehydrogenase GroES-like domain BI317_04815 PF00109 Beta-ketoacyl synthase, N-terminal domain BI317_04815 PF16197 Ketoacyl-synthetase C-terminal extension BI317_04815 PF00698 Acyl transferase domain BI317_04815 PF14765 Polyketide synthase dehydratase BI317_04830 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BI317_04870 PF05221 S-adenosyl-L-homocysteine hydrolase BI317_04870 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BI317_04880 PF00311 Phosphoenolpyruvate carboxylase BI317_04900 PF00691 OmpA family BI317_04900 PF00223 Photosystem I psaA/psaB protein BI317_04905 PF00328 Histidine phosphatase superfamily (branch 2) BI317_04915 PF02773 S-adenosylmethionine synthetase, C-terminal domain BI317_04915 PF02772 S-adenosylmethionine synthetase, central domain BI317_04915 PF00438 S-adenosylmethionine synthetase, N-terminal domain BI317_04925 PF13847 Methyltransferase domain BI317_04930 PF01207 Dihydrouridine synthase (Dus) BI317_04945 PF07670 Nucleoside recognition BI317_04945 PF07662 Na+ dependent nucleoside transporter C-terminus BI317_04945 PF01773 Na+ dependent nucleoside transporter N-terminus BI317_04950 PF00248 Aldo/keto reductase family BI317_04960 PF00593 TonB dependent receptor BI317_04960 PF07715 TonB-dependent Receptor Plug Domain BI317_05005 PF01527 Transposase BI317_05020 PF00528 Binding-protein-dependent transport system inner membrane component BI317_05025 PF00005 ABC transporter BI317_05035 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BI317_05045 PF00005 ABC transporter BI317_05050 PF13472 GDSL-like Lipase/Acylhydrolase family BI317_05055 PF00486 Transcriptional regulatory protein, C terminal BI317_05055 PF00072 Response regulator receiver domain BI317_05060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_05060 PF00512 His Kinase A (phospho-acceptor) domain BI317_05060 PF08521 Two-component sensor kinase N-terminal BI317_05070 PF01219 Prokaryotic diacylglycerol kinase BI317_05090 PF01790 Prolipoprotein diacylglyceryl transferase BI317_05095 PF00303 Thymidylate synthase BI317_05100 PF00186 Dihydrofolate reductase BI317_05105 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BI317_05105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BI317_05110 PF00005 ABC transporter BI317_05115 PF00528 Binding-protein-dependent transport system inner membrane component BI317_05125 PF00296 Luciferase-like monooxygenase BI317_05130 PF03358 NADPH-dependent FMN reductase BI317_05135 PF00149 Calcineurin-like phosphoesterase BI317_05140 PF04379 ApaG domain BI317_05145 PF00398 Ribosomal RNA adenine dimethylase BI317_05150 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BI317_05155 PF09312 SurA N-terminal domain BI317_05155 PF00639 PPIC-type PPIASE domain BI317_05160 PF04453 LPS transport system D BI317_05160 PF03968 OstA-like protein BI317_05165 PF00850 Histone deacetylase domain BI317_05170 PF01923 Cobalamin adenosyltransferase BI317_05180 PF01494 FAD binding domain BI317_05185 PF01494 FAD binding domain BI317_05205 PF07729 FCD domain BI317_05205 PF00392 Bacterial regulatory proteins, gntR family BI317_05210 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BI317_05215 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit BI317_05215 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BI317_05220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI317_05220 PF03466 LysR substrate binding domain BI317_05225 PF13193 AMP-binding enzyme C-terminal domain BI317_05225 PF00501 AMP-binding enzyme BI317_05230 PF00171 Aldehyde dehydrogenase family BI317_05235 PF00378 Enoyl-CoA hydratase/isomerase BI317_05260 PF08450 SMP-30/Gluconolactonase/LRE-like region BI317_05265 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BI317_05265 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BI317_05270 PF01728 FtsJ-like methyltransferase BI317_05270 PF18125 RlmM ferredoxin-like domain BI317_05290 PF00892 EamA-like transporter family BI317_05295 PF00749 tRNA synthetases class I (E and Q), catalytic domain BI317_05295 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BI317_05310 PF00072 Response regulator receiver domain BI317_05310 PF00990 Diguanylate cyclase, GGDEF domain BI317_05315 PF00672 HAMP domain BI317_05315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_05315 PF00512 His Kinase A (phospho-acceptor) domain BI317_05315 PF01627 Hpt domain BI317_05315 PF00072 Response regulator receiver domain BI317_05315 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BI317_05320 PF00196 Bacterial regulatory proteins, luxR family BI317_05320 PF00072 Response regulator receiver domain BI317_05330 PF01625 Peptide methionine sulfoxide reductase BI317_05340 PF00923 Transaldolase/Fructose-6-phosphate aldolase BI317_05345 PF01272 Transcription elongation factor, GreA/GreB, C-term BI317_05345 PF14760 Rnk N-terminus BI317_05350 PF03466 LysR substrate binding domain BI317_05350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI317_05355 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI317_05355 PF13192 Thioredoxin domain BI317_05360 PF00578 AhpC/TSA family BI317_05360 PF10417 C-terminal domain of 1-Cys peroxiredoxin BI317_05365 PF17827 PrmC N-terminal domain BI317_05365 PF05175 Methyltransferase small domain BI317_05370 PF00561 alpha/beta hydrolase fold BI317_05380 PF00293 NUDIX domain BI317_05385 PF01367 5'-3' exonuclease, C-terminal SAM fold BI317_05385 PF01612 3'-5' exonuclease BI317_05385 PF00476 DNA polymerase family A BI317_05385 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BI317_05435 PF01063 Amino-transferase class IV BI317_05440 PF00082 Subtilase family BI317_05440 PF04151 Bacterial pre-peptidase C-terminal domain BI317_05445 PF00082 Subtilase family BI317_05445 PF04151 Bacterial pre-peptidase C-terminal domain BI317_05450 PF00082 Subtilase family BI317_05450 PF04151 Bacterial pre-peptidase C-terminal domain BI317_05455 PF04073 Aminoacyl-tRNA editing domain BI317_05470 PF03358 NADPH-dependent FMN reductase BI317_05475 PF03631 Virulence factor BrkB BI317_05480 PF08534 Redoxin BI317_05485 PF00708 Acylphosphatase BI317_05495 PF03976 Polyphosphate kinase 2 (PPK2) BI317_05500 PF00994 Probable molybdopterin binding domain BI317_05515 PF03462 PCRF domain BI317_05515 PF00472 RF-1 domain BI317_05520 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BI317_05520 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BI317_05520 PF01488 Shikimate / quinate 5-dehydrogenase BI317_05530 PF03550 Outer membrane lipoprotein LolB BI317_05535 PF08544 GHMP kinases C terminal BI317_05535 PF00288 GHMP kinases N terminal domain BI317_05545 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BI317_05545 PF14572 Phosphoribosyl synthetase-associated domain BI317_05550 PF01386 Ribosomal L25p family BI317_05550 PF14693 Ribosomal protein TL5, C-terminal domain BI317_05555 PF01195 Peptidyl-tRNA hydrolase BI317_05560 PF01926 50S ribosome-binding GTPase BI317_05560 PF06071 Protein of unknown function (DUF933) BI317_05580 PF00009 Elongation factor Tu GTP binding domain BI317_05580 PF03144 Elongation factor Tu domain 2 BI317_05580 PF03143 Elongation factor Tu C-terminal domain BI317_05590 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BI317_05595 PF00467 KOW motif BI317_05595 PF02357 Transcription termination factor nusG BI317_05600 PF00298 Ribosomal protein L11, RNA binding domain BI317_05600 PF03946 Ribosomal protein L11, N-terminal domain BI317_05605 PF00687 Ribosomal protein L1p/L10e family BI317_05610 PF00466 Ribosomal protein L10 BI317_05615 PF16320 Ribosomal protein L7/L12 dimerisation domain BI317_05615 PF00542 Ribosomal protein L7/L12 C-terminal domain BI317_05620 PF00562 RNA polymerase Rpb2, domain 6 BI317_05620 PF10385 RNA polymerase beta subunit external 1 domain BI317_05620 PF04561 RNA polymerase Rpb2, domain 2 BI317_05620 PF04563 RNA polymerase beta subunit BI317_05620 PF04560 RNA polymerase Rpb2, domain 7 BI317_05620 PF04565 RNA polymerase Rpb2, domain 3 BI317_05625 PF00623 RNA polymerase Rpb1, domain 2 BI317_05625 PF04998 RNA polymerase Rpb1, domain 5 BI317_05625 PF05000 RNA polymerase Rpb1, domain 4 BI317_05625 PF04997 RNA polymerase Rpb1, domain 1 BI317_05625 PF04983 RNA polymerase Rpb1, domain 3 BI317_05630 PF00164 Ribosomal protein S12/S23 BI317_05635 PF00177 Ribosomal protein S7p/S5e BI317_05640 PF03764 Elongation factor G, domain IV BI317_05640 PF00009 Elongation factor Tu GTP binding domain BI317_05640 PF03144 Elongation factor Tu domain 2 BI317_05640 PF00679 Elongation factor G C-terminus BI317_05640 PF14492 Elongation Factor G, domain II BI317_05645 PF03143 Elongation factor Tu C-terminal domain BI317_05645 PF03144 Elongation factor Tu domain 2 BI317_05645 PF00009 Elongation factor Tu GTP binding domain BI317_05650 PF00338 Ribosomal protein S10p/S20e BI317_05655 PF00297 Ribosomal protein L3 BI317_05660 PF00573 Ribosomal protein L4/L1 family BI317_05665 PF00276 Ribosomal protein L23 BI317_05670 PF03947 Ribosomal Proteins L2, C-terminal domain BI317_05670 PF00181 Ribosomal Proteins L2, RNA binding domain BI317_05675 PF00203 Ribosomal protein S19 BI317_05680 PF00237 Ribosomal protein L22p/L17e BI317_05685 PF00189 Ribosomal protein S3, C-terminal domain BI317_05685 PF07650 KH domain BI317_05690 PF00252 Ribosomal protein L16p/L10e BI317_05695 PF00831 Ribosomal L29 protein BI317_05700 PF00366 Ribosomal protein S17 BI317_05705 PF00238 Ribosomal protein L14p/L23e BI317_05710 PF00467 KOW motif BI317_05710 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BI317_05715 PF00281 Ribosomal protein L5 BI317_05715 PF00673 ribosomal L5P family C-terminus BI317_05720 PF00253 Ribosomal protein S14p/S29e BI317_05725 PF00410 Ribosomal protein S8 BI317_05730 PF00347 Ribosomal protein L6 BI317_05735 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BI317_05740 PF03719 Ribosomal protein S5, C-terminal domain BI317_05740 PF00333 Ribosomal protein S5, N-terminal domain BI317_05745 PF00327 Ribosomal protein L30p/L7e BI317_05750 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BI317_05755 PF00344 SecY translocase BI317_05760 PF00416 Ribosomal protein S13/S18 BI317_05765 PF00411 Ribosomal protein S11 BI317_05770 PF00163 Ribosomal protein S4/S9 N-terminal domain BI317_05770 PF01479 S4 domain BI317_05775 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BI317_05775 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BI317_05775 PF01000 RNA polymerase Rpb3/RpoA insert domain BI317_05780 PF01196 Ribosomal protein L17 BI317_05790 PF02600 Disulfide bond formation protein DsbB BI317_05795 PF01474 Class-II DAHP synthetase family BI317_05805 PF01425 Amidase BI317_05820 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BI317_05825 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BI317_05825 PF00056 lactate/malate dehydrogenase, NAD binding domain BI317_05830 PF00043 Glutathione S-transferase, C-terminal domain BI317_05830 PF02798 Glutathione S-transferase, N-terminal domain BI317_05845 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BI317_05845 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI317_05850 PF08240 Alcohol dehydrogenase GroES-like domain BI317_05850 PF00107 Zinc-binding dehydrogenase BI317_05855 PF00223 Photosystem I psaA/psaB protein BI317_05855 PF00691 OmpA family BI317_05865 PF00849 RNA pseudouridylate synthase BI317_05875 PF00155 Aminotransferase class I and II BI317_05885 PF00528 Binding-protein-dependent transport system inner membrane component BI317_05890 PF00528 Binding-protein-dependent transport system inner membrane component BI317_05895 PF12857 TOBE-like domain BI317_05895 PF00005 ABC transporter BI317_05895 PF17850 CysA C-terminal regulatory domain BI317_05905 PF08240 Alcohol dehydrogenase GroES-like domain BI317_05905 PF00107 Zinc-binding dehydrogenase BI317_05915 PF04185 Phosphoesterase family BI317_05915 PF05506 Domain of unknown function (DUF756) BI317_05920 PF10459 Peptidase S46 BI317_05925 PF00300 Histidine phosphatase superfamily (branch 1) BI317_05935 PF02875 Mur ligase family, glutamate ligase domain BI317_05935 PF08245 Mur ligase middle domain BI317_05950 PF00156 Phosphoribosyl transferase domain BI317_05955 PF04305 Protein of unknown function (DUF455) BI317_05970 PF00149 Calcineurin-like phosphoesterase BI317_05975 PF01569 PAP2 superfamily BI317_05985 PF02541 Ppx/GppA phosphatase family BI317_05990 PF13089 Polyphosphate kinase N-terminal domain BI317_05990 PF17941 Polyphosphate kinase C-terminal domain 1 BI317_05990 PF13090 Polyphosphate kinase C-terminal domain 2 BI317_05990 PF02503 Polyphosphate kinase middle domain BI317_05995 PF11808 Phosphate regulon sensor protein PhoR BI317_05995 PF00989 PAS fold BI317_05995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_05995 PF00512 His Kinase A (phospho-acceptor) domain BI317_06000 PF00486 Transcriptional regulatory protein, C terminal BI317_06000 PF00072 Response regulator receiver domain BI317_06005 PF13181 Tetratricopeptide repeat BI317_06005 PF01435 Peptidase family M48 BI317_06010 PF00462 Glutaredoxin BI317_06020 PF18324 Hypothetical protein TT1725 BI317_06020 PF00180 Isocitrate/isopropylmalate dehydrogenase BI317_06065 PF13340 Putative transposase of IS4/5 family (DUF4096) BI317_06310 PF01555 DNA methylase BI317_06340 PF00072 Response regulator receiver domain BI317_06340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_06340 PF00512 His Kinase A (phospho-acceptor) domain BI317_06340 PF08448 PAS fold BI317_06340 PF13188 PAS domain BI317_06350 PF05697 Bacterial trigger factor protein (TF) BI317_06350 PF05698 Bacterial trigger factor protein (TF) C-terminus BI317_06355 PF00574 Clp protease BI317_06360 PF06689 ClpX C4-type zinc finger BI317_06360 PF10431 C-terminal, D2-small domain, of ClpB protein BI317_06360 PF07724 AAA domain (Cdc48 subfamily) BI317_06365 PF02190 ATP-dependent protease La (LON) substrate-binding domain BI317_06365 PF05362 Lon protease (S16) C-terminal proteolytic domain BI317_06365 PF00004 ATPase family associated with various cellular activities (AAA) BI317_06370 PF00216 Bacterial DNA-binding protein BI317_06395 PF01476 LysM domain BI317_06395 PF05257 CHAP domain BI317_06400 PF16123 Hydroxyacylglutathione hydrolase C-terminus BI317_06400 PF00753 Metallo-beta-lactamase superfamily BI317_06410 PF00075 RNase H BI317_06415 PF00929 Exonuclease BI317_06435 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BI317_06445 PF12706 Beta-lactamase superfamily domain BI317_06445 PF00753 Metallo-beta-lactamase superfamily BI317_06450 PF04055 Radical SAM superfamily BI317_06450 PF06463 Molybdenum Cofactor Synthesis C BI317_06455 PF01967 MoaC family BI317_06460 PF02597 ThiS family BI317_06465 PF02391 MoaE protein BI317_06480 PF12170 DNA polymerase III tau subunit V interacting with alpha BI317_06480 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding BI317_06480 PF12169 DNA polymerase III subunits gamma and tau domain III BI317_06485 PF02575 YbaB/EbfC DNA-binding family BI317_06490 PF02132 RecR protein BI317_06490 PF13662 Toprim domain BI317_06495 PF01230 HIT domain BI317_06505 PF01841 Transglutaminase-like superfamily BI317_06505 PF13559 Domain of unknown function (DUF4129) BI317_06505 PF11992 Domain of unknown function (DUF3488) BI317_06515 PF07726 ATPase family associated with various cellular activities (AAA) BI317_06515 PF17863 AAA lid domain BI317_06535 PF02545 Maf-like protein BI317_06540 PF02620 Large ribosomal RNA subunit accumulation protein YceD BI317_06545 PF01783 Ribosomal L32p protein family BI317_06550 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BI317_06550 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BI317_06560 PF00698 Acyl transferase domain BI317_06570 PF00550 Phosphopantetheine attachment site BI317_06575 PF02801 Beta-ketoacyl synthase, C-terminal domain BI317_06575 PF00109 Beta-ketoacyl synthase, N-terminal domain BI317_06580 PF00425 chorismate binding enzyme BI317_06580 PF04715 Anthranilate synthase component I, N terminal region BI317_06585 PF02618 YceG-like family BI317_06590 PF09115 DNA polymerase III, delta subunit, C terminal BI317_06605 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system BI317_06610 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system BI317_06620 PF02954 Bacterial regulatory protein, Fis family BI317_06620 PF06506 Propionate catabolism activator BI317_06620 PF00158 Sigma-54 interaction domain BI317_06630 PF00285 Citrate synthase, C-terminal domain BI317_06635 PF00694 Aconitase C-terminal domain BI317_06635 PF00330 Aconitase family (aconitate hydratase) BI317_06640 PF04303 PrpF protein BI317_06645 PF00593 TonB dependent receptor BI317_06645 PF07715 TonB-dependent Receptor Plug Domain BI317_06660 PF00207 Alpha-2-macroglobulin family BI317_06660 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain BI317_06660 PF11974 Bacterial alpha-2-macroglobulin MG3 domain BI317_06660 PF07703 Alpha-2-macroglobulin bait region domain BI317_06660 PF01835 MG2 domain BI317_06660 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain BI317_06660 PF17962 Bacterial macroglobulin domain 6 BI317_06660 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain BI317_06680 PF00905 Penicillin binding protein transpeptidase domain BI317_06680 PF00912 Transglycosylase BI317_06680 PF06832 Penicillin-Binding Protein C-terminus Family BI317_06690 PF08534 Redoxin BI317_06700 PF01556 DnaJ C terminal domain BI317_06700 PF00226 DnaJ domain BI317_06705 PF00072 Response regulator receiver domain BI317_06710 PF12221 Bacterial membrane protein N terminal BI317_06710 PF01145 SPFH domain / Band 7 family BI317_06715 PF01145 SPFH domain / Band 7 family BI317_06730 PF00709 Adenylosuccinate synthetase BI317_06760 PF02384 N-6 DNA Methylase BI317_06760 PF12161 HsdM N-terminal domain BI317_06775 PF12008 Type I restriction and modification enzyme - subunit R C terminal BI317_06775 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BI317_06775 PF18766 SWI2/SNF2 ATPase BI317_06785 PF13683 Integrase core domain BI317_06785 PF13276 HTH-like domain BI317_06790 PF01527 Transposase BI317_06850 PF13456 Reverse transcriptase-like BI317_06850 PF00300 Histidine phosphatase superfamily (branch 1) BI317_06855 PF01256 Carbohydrate kinase BI317_06880 PF07971 Glycosyl hydrolase family 92 BI317_06880 PF17678 Glycosyl hydrolase family 92 N-terminal domain BI317_06890 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI317_06915 PF17755 UvrA DNA-binding domain BI317_06930 PF01915 Glycosyl hydrolase family 3 C-terminal domain BI317_06930 PF14310 Fibronectin type III-like domain BI317_06930 PF00933 Glycosyl hydrolase family 3 N terminal domain BI317_06935 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BI317_06935 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BI317_06940 PF00941 FAD binding domain in molybdopterin dehydrogenase BI317_06940 PF03450 CO dehydrogenase flavoprotein C-terminal domain BI317_06945 PF10518 TAT (twin-arginine translocation) pathway signal sequence BI317_06945 PF01799 [2Fe-2S] binding domain BI317_06945 PF00111 2Fe-2S iron-sulfur cluster binding domain BI317_06950 PF08281 Sigma-70, region 4 BI317_06950 PF04542 Sigma-70 region 2 BI317_06985 PF00717 Peptidase S24-like BI317_06985 PF01726 LexA DNA binding domain BI317_07000 PF07733 Bacterial DNA polymerase III alpha NTPase domain BI317_07000 PF02811 PHP domain BI317_07000 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BI317_07000 PF14579 Helix-hairpin-helix motif BI317_07015 PF03169 OPT oligopeptide transporter protein BI317_07025 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region BI317_07025 PF07676 WD40-like Beta Propeller Repeat BI317_07025 PF00326 Prolyl oligopeptidase family BI317_07035 PF12833 Helix-turn-helix domain BI317_07035 PF02311 AraC-like ligand binding domain BI317_07045 PF00199 Catalase BI317_07045 PF06628 Catalase-related immune-responsive BI317_07045 PF18011 C-terminal domain found in long catalases BI317_07055 PF00248 Aldo/keto reductase family BI317_07060 PF00135 Carboxylesterase family BI317_07065 PF02347 Glycine cleavage system P-protein BI317_07070 PF07690 Major Facilitator Superfamily BI317_07095 PF08019 Phosphoethanolamine transferase EptA/EptB BI317_07095 PF00884 Sulfatase BI317_07110 PF00072 Response regulator receiver domain BI317_07110 PF00486 Transcriptional regulatory protein, C terminal BI317_07115 PF00512 His Kinase A (phospho-acceptor) domain BI317_07115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_07125 PF03776 Septum formation topological specificity factor MinE BI317_07130 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BI317_07135 PF05209 Septum formation inhibitor MinC, N-terminal domain BI317_07135 PF03775 Septum formation inhibitor MinC, C-terminal domain BI317_07145 PF07730 Histidine kinase BI317_07150 PF00196 Bacterial regulatory proteins, luxR family BI317_07150 PF00072 Response regulator receiver domain BI317_07165 PF00730 HhH-GPD superfamily base excision DNA repair protein BI317_07195 PF01370 NAD dependent epimerase/dehydratase family BI317_07195 PF02222 ATP-grasp domain BI317_07215 PF04377 Arginine-tRNA-protein transferase, C terminus BI317_07215 PF04376 Arginine-tRNA-protein transferase, N terminus BI317_07230 PF08281 Sigma-70, region 4 BI317_07230 PF04542 Sigma-70 region 2 BI317_07245 PF00378 Enoyl-CoA hydratase/isomerase BI317_07260 PF17760 UvrA interaction domain BI317_07260 PF00005 ABC transporter BI317_07260 PF17755 UvrA DNA-binding domain BI317_07265 PF00829 Ribosomal prokaryotic L21 protein BI317_07270 PF01016 Ribosomal L27 protein BI317_07275 PF01926 50S ribosome-binding GTPase BI317_07275 PF01018 GTP1/OBG BI317_07280 PF01649 Ribosomal protein S20 BI317_07290 PF06574 FAD synthetase BI317_07290 PF01687 Riboflavin kinase BI317_07295 PF00133 tRNA synthetases class I (I, L, M and V) BI317_07295 PF06827 Zinc finger found in FPG and IleRS BI317_07295 PF08264 Anticodon-binding domain of tRNA BI317_07300 PF01252 Signal peptidase (SPase) II BI317_07305 PF02401 LytB protein BI317_07315 PF06481 COX Aromatic Rich Motif BI317_07315 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BI317_07320 PF00115 Cytochrome C and Quinol oxidase polypeptide I BI317_07325 PF00510 Cytochrome c oxidase subunit III BI317_07330 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BI317_07340 PF18073 Rubredoxin metal binding domain BI317_07345 PF05656 Protein of unknown function (DUF805) BI317_07355 PF12833 Helix-turn-helix domain BI317_07360 PF00183 Hsp90 protein BI317_07360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_07375 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BI317_07380 PF01740 STAS domain BI317_07380 PF08678 Rsbr N terminal BI317_07385 PF01740 STAS domain BI317_07390 PF13581 Histidine kinase-like ATPase domain BI317_07400 PF17149 Periplasmic sensor domain found in signal transduction proteins BI317_07400 PF01627 Hpt domain BI317_07400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_07400 PF00512 His Kinase A (phospho-acceptor) domain BI317_07400 PF00072 Response regulator receiver domain BI317_07400 PF00672 HAMP domain BI317_07405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_07405 PF13188 PAS domain BI317_07405 PF00072 Response regulator receiver domain BI317_07405 PF08448 PAS fold BI317_07405 PF00512 His Kinase A (phospho-acceptor) domain BI317_07415 PF00593 TonB dependent receptor BI317_07415 PF07715 TonB-dependent Receptor Plug Domain BI317_07420 PF00085 Thioredoxin BI317_07425 PF07237 Protein of unknown function (DUF1428) BI317_07430 PF13493 Domain of unknown function (DUF4118) BI317_07430 PF13492 GAF domain BI317_07430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_07430 PF00512 His Kinase A (phospho-acceptor) domain BI317_07430 PF02702 Osmosensitive K+ channel His kinase sensor domain BI317_07435 PF00072 Response regulator receiver domain BI317_07435 PF01339 CheB methylesterase BI317_07440 PF01739 CheR methyltransferase, SAM binding domain BI317_07440 PF03705 CheR methyltransferase, all-alpha domain BI317_07445 PF01627 Hpt domain BI317_07445 PF00672 HAMP domain BI317_07445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_07445 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BI317_07445 PF00072 Response regulator receiver domain BI317_07445 PF00512 His Kinase A (phospho-acceptor) domain BI317_07450 PF00072 Response regulator receiver domain BI317_07450 PF13426 PAS domain BI317_07450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_07455 PF00072 Response regulator receiver domain BI317_07470 PF03466 LysR substrate binding domain BI317_07470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI317_07475 PF06964 Alpha-L-arabinofuranosidase C-terminal domain BI317_07495 PF05598 Transposase domain (DUF772) BI317_07495 PF01609 Transposase DDE domain BI317_07505 PF01263 Aldose 1-epimerase BI317_07510 PF01578 Cytochrome C assembly protein BI317_07515 PF02978 Signal peptide binding domain BI317_07515 PF02881 SRP54-type protein, helical bundle domain BI317_07515 PF00448 SRP54-type protein, GTPase domain BI317_07520 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) BI317_07525 PF03060 Nitronate monooxygenase BI317_07535 PF00886 Ribosomal protein S16 BI317_07540 PF05239 PRC-barrel domain BI317_07540 PF01782 RimM N-terminal domain BI317_07545 PF01746 tRNA (Guanine-1)-methyltransferase BI317_07550 PF01245 Ribosomal protein L19 BI317_07555 PF01554 MatE BI317_07560 PF01479 S4 domain BI317_07570 PF00141 Peroxidase BI317_07580 PF01624 MutS domain I BI317_07580 PF00488 MutS domain V BI317_07580 PF05192 MutS domain III BI317_07580 PF05190 MutS family domain IV BI317_07580 PF05188 MutS domain II BI317_07610 PF00440 Bacterial regulatory proteins, tetR family BI317_07610 PF17754 MftR C-terminal domain BI317_07625 PF00106 short chain dehydrogenase BI317_07640 PF00375 Sodium:dicarboxylate symporter family BI317_07645 PF13378 Enolase C-terminal domain-like BI317_07650 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 BI317_07650 PF00703 Glycosyl hydrolases family 2 BI317_07650 PF16355 Domain of unknown function (DUF4982) BI317_07650 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BI317_07650 PF02837 Glycosyl hydrolases family 2, sugar binding domain BI317_07655 PF07745 Glycosyl hydrolase family 53 BI317_07665 PF01381 Helix-turn-helix BI317_07665 PF09856 Predicted transcriptional regulator (DUF2083) BI317_07665 PF06114 IrrE N-terminal-like domain BI317_07670 PF00171 Aldehyde dehydrogenase family BI317_07675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BI317_07675 PF02770 Acyl-CoA dehydrogenase, middle domain BI317_07675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BI317_07680 PF00378 Enoyl-CoA hydratase/isomerase BI317_07685 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BI317_07685 PF00378 Enoyl-CoA hydratase/isomerase BI317_07685 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BI317_07690 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BI317_07690 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BI317_07700 PF01545 Cation efflux family BI317_07720 PF13181 Tetratricopeptide repeat BI317_07725 PF07715 TonB-dependent Receptor Plug Domain BI317_07725 PF00593 TonB dependent receptor BI317_07730 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BI317_07730 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BI317_07730 PF00378 Enoyl-CoA hydratase/isomerase BI317_07735 PF04542 Sigma-70 region 2 BI317_07735 PF08281 Sigma-70, region 4 BI317_07745 PF13180 PDZ domain BI317_07750 PF00679 Elongation factor G C-terminus BI317_07750 PF06421 GTP-binding protein LepA C-terminus BI317_07750 PF00009 Elongation factor Tu GTP binding domain BI317_07750 PF03144 Elongation factor Tu domain 2 BI317_07755 PF10502 Signal peptidase, peptidase S26 BI317_07765 PF00035 Double-stranded RNA binding motif BI317_07765 PF14622 Ribonuclease-III-like BI317_07770 PF07650 KH domain BI317_07770 PF01926 50S ribosome-binding GTPase BI317_07775 PF02565 Recombination protein O C terminal BI317_07775 PF11967 Recombination protein O N terminal BI317_07780 PF00486 Transcriptional regulatory protein, C terminal BI317_07780 PF00072 Response regulator receiver domain BI317_07785 PF05958 tRNA (Uracil-5-)-methyltransferase BI317_07805 PF01323 DSBA-like thioredoxin domain BI317_07810 PF01593 Flavin containing amine oxidoreductase BI317_07815 PF04244 Deoxyribodipyrimidine photo-lyase-related protein BI317_07820 PF00933 Glycosyl hydrolase family 3 N terminal domain BI317_07830 PF01048 Phosphorylase superfamily BI317_07835 PF00313 'Cold-shock' DNA-binding domain BI317_07840 PF01494 FAD binding domain BI317_07850 PF00271 Helicase conserved C-terminal domain BI317_07850 PF08494 DEAD/H associated BI317_07850 PF00270 DEAD/DEAH box helicase BI317_07855 PF04679 ATP dependent DNA ligase C terminal region BI317_07855 PF01068 ATP dependent DNA ligase domain BI317_07855 PF04675 DNA ligase N terminus BI317_07865 PF01068 ATP dependent DNA ligase domain BI317_07865 PF04679 ATP dependent DNA ligase C terminal region BI317_07865 PF04675 DNA ligase N terminus BI317_07880 PF00990 Diguanylate cyclase, GGDEF domain BI317_07880 PF00072 Response regulator receiver domain BI317_07895 PF02803 Thiolase, C-terminal domain BI317_07895 PF00108 Thiolase, N-terminal domain BI317_07900 PF03797 Autotransporter beta-domain BI317_07900 PF12951 Passenger-associated-transport-repeat BI317_07900 PF00082 Subtilase family BI317_07905 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BI317_07905 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BI317_07915 PF01863 Protein of unknown function DUF45 BI317_07920 PF07043 Protein of unknown function (DUF1328) BI317_07930 PF01258 Prokaryotic dksA/traR C4-type zinc finger BI317_07945 PF08281 Sigma-70, region 4 BI317_07945 PF04542 Sigma-70 region 2 BI317_07970 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BI317_07980 PF03831 PhnA domain BI317_07980 PF08274 PhnA Zinc-Ribbon BI317_07995 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BI317_08035 PF03706 Lysylphosphatidylglycerol synthase TM region BI317_08035 PF09924 Uncharacterised conserved protein (DUF2156) BI317_08045 PF01042 Endoribonuclease L-PSP BI317_08090 PF04545 Sigma-70, region 4 BI317_08090 PF04542 Sigma-70 region 2 BI317_08105 PF04060 Putative Fe-S cluster BI317_08115 PF09334 tRNA synthetases class I (M) BI317_08115 PF01588 Putative tRNA binding domain BI317_08130 PF13732 Domain of unknown function (DUF4162) BI317_08130 PF00005 ABC transporter BI317_08135 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BI317_08140 PF00324 Amino acid permease BI317_08145 PF02574 Homocysteine S-methyltransferase BI317_08160 PF01810 LysE type translocator BI317_08165 PF02592 Putative vitamin uptake transporter BI317_08205 PF03551 Transcriptional regulator PadR-like family BI317_08225 PF13340 Putative transposase of IS4/5 family (DUF4096) BI317_08250 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BI317_08255 PF14579 Helix-hairpin-helix motif BI317_08255 PF07733 Bacterial DNA polymerase III alpha NTPase domain BI317_08255 PF01336 OB-fold nucleic acid binding domain BI317_08255 PF02811 PHP domain BI317_08255 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BI317_08260 PF01351 Ribonuclease HII BI317_08265 PF02684 Lipid-A-disaccharide synthetase BI317_08270 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BI317_08270 PF00132 Bacterial transferase hexapeptide (six repeats) BI317_08275 PF07977 FabA-like domain BI317_08280 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BI317_08280 PF00132 Bacterial transferase hexapeptide (six repeats) BI317_08290 PF01103 Surface antigen BI317_08290 PF07244 Surface antigen variable number repeat BI317_08295 PF17820 PDZ domain BI317_08295 PF02163 Peptidase family M50 BI317_08300 PF13288 DXP reductoisomerase C-terminal domain BI317_08300 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BI317_08300 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BI317_08310 PF01255 Putative undecaprenyl diphosphate synthase BI317_08315 PF01765 Ribosome recycling factor BI317_08320 PF00696 Amino acid kinase family BI317_08325 PF00990 Diguanylate cyclase, GGDEF domain BI317_08325 PF00072 Response regulator receiver domain BI317_08330 PF00889 Elongation factor TS BI317_08335 PF00318 Ribosomal protein S2 BI317_08375 PF00557 Metallopeptidase family M24 BI317_08380 PF01909 Nucleotidyltransferase domain BI317_08380 PF01966 HD domain BI317_08380 PF08335 GlnD PII-uridylyltransferase BI317_08385 PF00132 Bacterial transferase hexapeptide (six repeats) BI317_08385 PF14602 Hexapeptide repeat of succinyl-transferase BI317_08385 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal BI317_08395 PF03960 ArsC family BI317_08400 PF07687 Peptidase dimerisation domain BI317_08400 PF01546 Peptidase family M20/M25/M40 BI317_08405 PF13537 Glutamine amidotransferase domain BI317_08405 PF00733 Asparagine synthase BI317_08415 PF07715 TonB-dependent Receptor Plug Domain BI317_08415 PF00593 TonB dependent receptor BI317_08420 PF01804 Penicillin amidase BI317_08425 PF00210 Ferritin-like domain BI317_08430 PF05724 Thiopurine S-methyltransferase (TPMT) BI317_08440 PF13340 Putative transposase of IS4/5 family (DUF4096) BI317_08450 PF00521 DNA gyrase/topoisomerase IV, subunit A BI317_08450 PF03989 DNA gyrase C-terminal domain, beta-propeller BI317_08465 PF02321 Outer membrane efflux protein BI317_08470 PF00529 HlyD membrane-fusion protein of T1SS BI317_08470 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI317_08475 PF07690 Major Facilitator Superfamily BI317_08495 PF00933 Glycosyl hydrolase family 3 N terminal domain BI317_08495 PF01915 Glycosyl hydrolase family 3 C-terminal domain BI317_08495 PF14310 Fibronectin type III-like domain BI317_08505 PF00854 POT family BI317_08530 PF12802 MarR family BI317_08535 PF01432 Peptidase family M3 BI317_08540 PF00255 Glutathione peroxidase BI317_08545 PF00175 Oxidoreductase NAD-binding domain BI317_08545 PF00970 Oxidoreductase FAD-binding domain BI317_08550 PF00005 ABC transporter BI317_08555 PF05683 Fumarase C-terminus BI317_08555 PF05681 Fumarate hydratase (Fumerase) BI317_08570 PF00484 Carbonic anhydrase BI317_08580 PF02253 Phospholipase A1 BI317_08590 PF00313 'Cold-shock' DNA-binding domain BI317_08605 PF00899 ThiF family BI317_08610 PF01026 TatD related DNase BI317_08625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BI317_08625 PF02770 Acyl-CoA dehydrogenase, middle domain BI317_08625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BI317_08635 PF02798 Glutathione S-transferase, N-terminal domain BI317_08635 PF00043 Glutathione S-transferase, C-terminal domain BI317_08640 PF13537 Glutamine amidotransferase domain BI317_08640 PF00733 Asparagine synthase BI317_08650 PF03796 DnaB-like helicase C terminal domain BI317_08650 PF00772 DnaB-like helicase N terminal domain BI317_08660 PF00875 DNA photolyase BI317_08660 PF03441 FAD binding domain of DNA photolyase BI317_08665 PF00691 OmpA family BI317_08665 PF05736 OprF membrane domain BI317_08675 PF00085 Thioredoxin BI317_08685 PF13603 Leucyl-tRNA synthetase, Domain 2 BI317_08685 PF00133 tRNA synthetases class I (I, L, M and V) BI317_08685 PF08264 Anticodon-binding domain of tRNA BI317_08700 PF01467 Cytidylyltransferase-like BI317_08720 PF02590 Predicted SPOUT methyltransferase BI317_08735 PF02545 Maf-like protein BI317_08740 PF10150 Ribonuclease E/G family BI317_08740 PF00575 S1 RNA binding domain BI317_08745 PF13502 AsmA-like C-terminal region BI317_08745 PF13116 Protein of unknown function BI317_08755 PF01523 Putative modulator of DNA gyrase BI317_08760 PF04751 Protein of unknown function (DUF615) BI317_08765 PF01523 Putative modulator of DNA gyrase BI317_08775 PF14521 Lysine-specific metallo-endopeptidase BI317_08780 PF00348 Polyprenyl synthetase BI317_08785 PF02609 Exonuclease VII small subunit BI317_08790 PF01171 PP-loop family BI317_08790 PF09179 TilS substrate binding domain BI317_08790 PF11734 TilS substrate C-terminal domain BI317_08795 PF00245 Alkaline phosphatase BI317_08800 PF00375 Sodium:dicarboxylate symporter family BI317_08805 PF13649 Methyltransferase domain BI317_08815 PF00877 NlpC/P60 family BI317_08820 PF00877 NlpC/P60 family BI317_08825 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BI317_08830 PF04235 Protein of unknown function (DUF418) BI317_08835 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI317_08835 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BI317_08860 PF01431 Peptidase family M13 BI317_08860 PF05649 Peptidase family M13 BI317_08880 PF05598 Transposase domain (DUF772) BI317_08880 PF01609 Transposase DDE domain BI317_08890 PF07715 TonB-dependent Receptor Plug Domain BI317_08890 PF00593 TonB dependent receptor BI317_08895 PF10609 NUBPL iron-transfer P-loop NTPase BI317_08905 PF00692 dUTPase BI317_08920 PF01738 Dienelactone hydrolase family BI317_08925 PF04055 Radical SAM superfamily BI317_08925 PF00919 Uncharacterized protein family UPF0004 BI317_08925 PF18693 TRAM domain BI317_08930 PF03449 Transcription elongation factor, N-terminal BI317_08930 PF01272 Transcription elongation factor, GreA/GreB, C-term BI317_08955 PF01609 Transposase DDE domain BI317_08955 PF05598 Transposase domain (DUF772) BI317_08970 PF12802 MarR family BI317_08980 PF00293 NUDIX domain BI317_08990 PF05872 Bacterial protein of unknown function (DUF853) BI317_09000 PF02666 Phosphatidylserine decarboxylase BI317_09005 PF02630 SCO1/SenC BI317_09010 PF05175 Methyltransferase small domain BI317_09020 PF01264 Chorismate synthase BI317_09025 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BI317_09025 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BI317_09030 PF01118 Semialdehyde dehydrogenase, NAD binding domain BI317_09030 PF02774 Semialdehyde dehydrogenase, dimerisation domain BI317_09045 PF01416 tRNA pseudouridine synthase BI317_09050 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BI317_09055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI317_09055 PF03466 LysR substrate binding domain BI317_09060 PF00291 Pyridoxal-phosphate dependent enzyme BI317_09070 PF00290 Tryptophan synthase alpha chain BI317_09075 PF17848 Acetyl-coA carboxylase zinc finger domain BI317_09075 PF01039 Carboxyl transferase domain BI317_09080 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BI317_09080 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BI317_09080 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BI317_09080 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BI317_09095 PF03707 Bacterial signalling protein N terminal repeat BI317_09095 PF00990 Diguanylate cyclase, GGDEF domain BI317_09095 PF00563 EAL domain BI317_09115 PF00106 short chain dehydrogenase BI317_09120 PF00121 Triosephosphate isomerase BI317_09135 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BI317_09140 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BI317_09145 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BI317_09150 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BI317_09160 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BI317_09160 PF10531 SLBB domain BI317_09160 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BI317_09165 PF00384 Molybdopterin oxidoreductase BI317_09165 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BI317_09165 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal BI317_09170 PF00146 NADH dehydrogenase BI317_09175 PF12838 4Fe-4S dicluster domain BI317_09180 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BI317_09185 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BI317_09190 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BI317_09190 PF00361 Proton-conducting membrane transporter BI317_09195 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus BI317_09195 PF00361 Proton-conducting membrane transporter BI317_09200 PF00361 Proton-conducting membrane transporter BI317_09210 PF02576 RimP N-terminal domain BI317_09210 PF17384 RimP C-terminal SH3 domain BI317_09215 PF08529 NusA N-terminal domain BI317_09215 PF00575 S1 RNA binding domain BI317_09215 PF13184 NusA-like KH domain BI317_09220 PF04760 Translation initiation factor IF-2, N-terminal region BI317_09220 PF08364 Bacterial translation initiation factor IF-2 associated region BI317_09220 PF11987 Translation-initiation factor 2 BI317_09220 PF00009 Elongation factor Tu GTP binding domain BI317_09225 PF02033 Ribosome-binding factor A BI317_09230 PF16198 tRNA pseudouridylate synthase B C-terminal domain BI317_09230 PF09157 Pseudouridine synthase II TruB, C-terminal BI317_09230 PF01509 TruB family pseudouridylate synthase (N terminal domain) BI317_09235 PF00312 Ribosomal protein S15 BI317_09240 PF01138 3' exoribonuclease family, domain 1 BI317_09240 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BI317_09240 PF00575 S1 RNA binding domain BI317_09240 PF03725 3' exoribonuclease family, domain 2 BI317_09240 PF00013 KH domain BI317_09255 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BI317_09255 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BI317_09265 PF00731 AIR carboxylase BI317_09275 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BI317_09275 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BI317_09280 PF00462 Glutaredoxin BI317_09290 PF01914 MarC family integral membrane protein BI317_09295 PF00593 TonB dependent receptor BI317_09295 PF00593 TonB dependent receptor BI317_09300 PF03641 Possible lysine decarboxylase BI317_09300 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases BI317_09300 PF11892 Domain of unknown function (DUF3412) BI317_09325 PF05567 Neisseria PilC beta-propeller domain BI317_09340 PF00114 Pilin (bacterial filament) BI317_09340 PF07963 Prokaryotic N-terminal methylation motif BI317_09345 PF00271 Helicase conserved C-terminal domain BI317_09345 PF17757 UvrB interaction domain BI317_09345 PF04851 Type III restriction enzyme, res subunit BI317_09345 PF02151 UvrB/uvrC motif BI317_09345 PF12344 Ultra-violet resistance protein B BI317_09360 PF02534 Type IV secretory system Conjugative DNA transfer BI317_09380 PF03743 Bacterial conjugation TrbI-like protein BI317_09385 PF00437 Type II/IV secretion system protein BI317_09390 PF01464 Transglycosylase SLT domain BI317_09400 PF05101 Type IV secretory pathway, VirB3-like protein BI317_09405 PF03135 CagE, TrbE, VirB family, component of type IV transporter system BI317_09460 PF01527 Transposase BI317_09470 PF13276 HTH-like domain BI317_09470 PF13683 Integrase core domain BI317_09475 PF01527 Transposase BI317_09485 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BI317_09485 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BI317_09485 PF02824 TGS domain BI317_09485 PF03129 Anticodon binding domain BI317_09490 PF05198 Translation initiation factor IF-3, N-terminal domain BI317_09490 PF00707 Translation initiation factor IF-3, C-terminal domain BI317_09495 PF01632 Ribosomal protein L35 BI317_09500 PF00453 Ribosomal protein L20 BI317_09505 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BI317_09505 PF01409 tRNA synthetases class II core domain (F) BI317_09510 PF03483 B3/4 domain BI317_09510 PF03147 Ferredoxin-fold anticodon binding domain BI317_09510 PF01588 Putative tRNA binding domain BI317_09510 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BI317_09510 PF03484 tRNA synthetase B5 domain BI317_09515 PF00216 Bacterial DNA-binding protein BI317_09520 PF13411 MerR HTH family regulatory protein BI317_09540 PF02397 Bacterial sugar transferase BI317_09560 PF13439 Glycosyltransferase Family 4 BI317_09560 PF00534 Glycosyl transferases group 1 BI317_09570 PF14667 Polysaccharide biosynthesis C-terminal domain BI317_09585 PF03808 Glycosyl transferase WecB/TagA/CpsF family BI317_09600 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BI317_09600 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BI317_09605 PF00753 Metallo-beta-lactamase superfamily BI317_09605 PF16123 Hydroxyacylglutathione hydrolase C-terminus BI317_09610 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family BI317_09635 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BI317_09635 PF02780 Transketolase, C-terminal domain BI317_09635 PF02779 Transketolase, pyrimidine binding domain BI317_09655 PF08212 Lipocalin-like domain BI317_09800 PF05598 Transposase domain (DUF772) BI317_09800 PF01609 Transposase DDE domain BI317_09820 PF00574 Clp protease BI317_09885 PF13276 HTH-like domain BI317_09885 PF13683 Integrase core domain BI317_09890 PF01527 Transposase BI317_09995 PF00893 Small Multidrug Resistance protein BI317_10020 PF04362 Bacterial Fe(2+) trafficking BI317_10025 PF10576 Iron-sulfur binding domain of endonuclease III BI317_10025 PF00633 Helix-hairpin-helix motif BI317_10025 PF00730 HhH-GPD superfamily base excision DNA repair protein BI317_10025 PF14815 NUDIX domain BI317_10030 PF02881 SRP54-type protein, helical bundle domain BI317_10030 PF00448 SRP54-type protein, GTPase domain BI317_10040 PF05544 Proline racemase BI317_10045 PF01266 FAD dependent oxidoreductase BI317_10055 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI317_10055 PF04324 BFD-like [2Fe-2S] binding domain BI317_10060 PF00701 Dihydrodipicolinate synthetase family BI317_10065 PF00171 Aldehyde dehydrogenase family BI317_10070 PF00557 Metallopeptidase family M24 BI317_10070 PF01321 Creatinase/Prolidase N-terminal domain BI317_10085 PF13520 Amino acid permease BI317_10120 PF00082 Subtilase family BI317_10120 PF09286 Pro-kumamolisin, activation domain BI317_10140 PF07532 Bacterial Ig-like domain (group 4) BI317_10145 PF07532 Bacterial Ig-like domain (group 4) BI317_10160 PF07715 TonB-dependent Receptor Plug Domain BI317_10160 PF00593 TonB dependent receptor BI317_10185 PF00183 Hsp90 protein BI317_10185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_10195 PF01467 Cytidylyltransferase-like BI317_10210 PF00037 4Fe-4S binding domain BI317_10225 PF02927 Cellulase N-terminal ig-like domain BI317_10225 PF00759 Glycosyl hydrolase family 9 BI317_10265 PF02547 Queuosine biosynthesis protein BI317_10270 PF01702 Queuine tRNA-ribosyltransferase BI317_10275 PF02699 Preprotein translocase subunit BI317_10280 PF07549 SecD/SecF GG Motif BI317_10280 PF13721 SecD export protein N-terminal TM region BI317_10280 PF02355 Protein export membrane protein BI317_10285 PF02355 Protein export membrane protein BI317_10285 PF07549 SecD/SecF GG Motif BI317_10315 PF05598 Transposase domain (DUF772) BI317_10315 PF01609 Transposase DDE domain BI317_10325 PF01527 Transposase BI317_10330 PF13340 Putative transposase of IS4/5 family (DUF4096) BI317_10345 PF01527 Transposase BI317_10350 PF13276 HTH-like domain BI317_10350 PF13683 Integrase core domain BI317_10370 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BI317_10375 PF00294 pfkB family carbohydrate kinase BI317_10380 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BI317_10380 PF00381 PTS HPr component phosphorylation site BI317_10380 PF02896 PEP-utilising enzyme, TIM barrel domain BI317_10380 PF00391 PEP-utilising enzyme, mobile domain BI317_10380 PF05524 PEP-utilising enzyme, N-terminal BI317_10385 PF00356 Bacterial regulatory proteins, lacI family BI317_10390 PF00873 AcrB/AcrD/AcrF family BI317_10395 PF00529 HlyD membrane-fusion protein of T1SS BI317_10395 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI317_10405 PF05088 Bacterial NAD-glutamate dehydrogenase BI317_10445 PF08240 Alcohol dehydrogenase GroES-like domain BI317_10445 PF00107 Zinc-binding dehydrogenase BI317_10450 PF00106 short chain dehydrogenase BI317_10455 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BI317_10460 PF00440 Bacterial regulatory proteins, tetR family BI317_10465 PF13340 Putative transposase of IS4/5 family (DUF4096) BI317_10475 PF00106 short chain dehydrogenase BI317_10480 PF08240 Alcohol dehydrogenase GroES-like domain BI317_10480 PF00107 Zinc-binding dehydrogenase BI317_10490 PF07690 Major Facilitator Superfamily BI317_10495 PF00072 Response regulator receiver domain BI317_10500 PF00072 Response regulator receiver domain BI317_10500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_10500 PF00512 His Kinase A (phospho-acceptor) domain BI317_10500 PF01627 Hpt domain BI317_10500 PF00672 HAMP domain BI317_10500 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BI317_10505 PF04286 Protein of unknown function (DUF445) BI317_10515 PF00202 Aminotransferase class-III BI317_10520 PF07690 Major Facilitator Superfamily BI317_10525 PF02634 FdhD/NarQ family BI317_10530 PF00384 Molybdopterin oxidoreductase BI317_10560 PF00990 Diguanylate cyclase, GGDEF domain BI317_10560 PF00072 Response regulator receiver domain BI317_10570 PF01266 FAD dependent oxidoreductase BI317_10575 PF00120 Glutamine synthetase, catalytic domain BI317_10580 PF07722 Peptidase C26 BI317_10585 PF00120 Glutamine synthetase, catalytic domain BI317_10590 PF00202 Aminotransferase class-III BI317_10595 PF13416 Bacterial extracellular solute-binding protein BI317_10600 PF13533 Biotin-lipoyl like BI317_10610 PF02321 Outer membrane efflux protein BI317_10615 PF00005 ABC transporter BI317_10615 PF08402 TOBE domain BI317_10625 PF00528 Binding-protein-dependent transport system inner membrane component BI317_10630 PF00528 Binding-protein-dependent transport system inner membrane component BI317_10640 PF00171 Aldehyde dehydrogenase family BI317_10660 PF03471 Transporter associated domain BI317_10660 PF00571 CBS domain BI317_10680 PF02562 PhoH-like protein BI317_10685 PF00919 Uncharacterized protein family UPF0004 BI317_10685 PF04055 Radical SAM superfamily BI317_10685 PF01938 TRAM domain BI317_10700 PF01464 Transglycosylase SLT domain BI317_10705 PF00355 Rieske [2Fe-2S] domain BI317_10705 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal BI317_10710 PF00033 Cytochrome b/b6/petB BI317_10710 PF00032 Cytochrome b(C-terminal)/b6/petD BI317_10715 PF02167 Cytochrome C1 family BI317_10725 PF00043 Glutathione S-transferase, C-terminal domain BI317_10725 PF02798 Glutathione S-transferase, N-terminal domain BI317_10730 PF04386 Stringent starvation protein B BI317_10740 PF00270 DEAD/DEAH box helicase BI317_10740 PF00271 Helicase conserved C-terminal domain BI317_10740 PF08494 DEAD/H associated BI317_10750 PF12729 Four helix bundle sensory module for signal transduction BI317_10750 PF00672 HAMP domain BI317_10750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI317_10755 PF01584 CheW-like domain BI317_10760 PF00990 Diguanylate cyclase, GGDEF domain BI317_10760 PF07694 5TMR of 5TMR-LYT BI317_10775 PF00570 HRDC domain BI317_10775 PF01612 3'-5' exonuclease BI317_10780 PF03781 Sulfatase-modifying factor enzyme 1 BI317_10795 PF13742 OB-fold nucleic acid binding domain BI317_10795 PF02601 Exonuclease VII, large subunit BI317_10800 PF08331 Domain of unknown function (DUF1730) BI317_10805 PF01256 Carbohydrate kinase BI317_10805 PF03853 YjeF-related protein N-terminus BI317_10815 PF11741 AMIN domain BI317_10815 PF01520 N-acetylmuramoyl-L-alanine amidase BI317_10820 PF08676 MutL C terminal dimerisation domain BI317_10820 PF01119 DNA mismatch repair protein, C-terminal domain BI317_10835 PF07879 PHB/PHA accumulation regulator DNA-binding domain BI317_10835 PF05233 PHB accumulation regulatory domain BI317_10840 PF00106 short chain dehydrogenase BI317_10845 PF00749 tRNA synthetases class I (E and Q), catalytic domain BI317_10850 PF01435 Peptidase family M48 BI317_10860 PF00563 EAL domain BI317_10860 PF00990 Diguanylate cyclase, GGDEF domain BI317_10860 PF03707 Bacterial signalling protein N terminal repeat BI317_10870 PF07152 YaeQ protein BI317_10875 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BI317_10880 PF00313 'Cold-shock' DNA-binding domain BI317_10885 PF02798 Glutathione S-transferase, N-terminal domain BI317_10885 PF14497 Glutathione S-transferase, C-terminal domain BI317_10895 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BI317_10900 PF00156 Phosphoribosyl transferase domain BI317_10905 PF03880 DbpA RNA binding domain BI317_10905 PF00270 DEAD/DEAH box helicase BI317_10905 PF00271 Helicase conserved C-terminal domain BI317_10920 PF01208 Uroporphyrinogen decarboxylase (URO-D) BI317_10930 PF01761 3-dehydroquinate synthase BI317_10935 PF01202 Shikimate kinase BI317_10940 PF01243 Pyridoxamine 5'-phosphate oxidase BI317_10940 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BI317_10945 PF00583 Acetyltransferase (GNAT) family BI317_10955 PF04012 PspA/IM30 family BI317_10980 PF03738 Glutathionylspermidine synthase preATP-grasp BI317_10985 PF07690 Major Facilitator Superfamily BI317_10990 PF00376 MerR family regulatory protein BI317_10990 PF09278 MerR, DNA binding BI317_11025 PF12706 Beta-lactamase superfamily domain BI317_11040 PF00324 Amino acid permease BI317_11045 PF00196 Bacterial regulatory proteins, luxR family BI317_11050 PF00561 alpha/beta hydrolase fold BI317_11055 PF00544 Pectate lyase BI317_11060 PF00324 Amino acid permease BI317_11070 PF01654 Cytochrome bd terminal oxidase subunit I BI317_11075 PF02322 Cytochrome bd terminal oxidase subunit II BI317_11080 PF00756 Putative esterase BI317_11085 PF00571 CBS domain BI317_11085 PF01769 Divalent cation transporter BI317_11085 PF03448 MgtE intracellular N domain BI317_11090 PF05524 PEP-utilising enzyme, N-terminal BI317_11090 PF02896 PEP-utilising enzyme, TIM barrel domain BI317_11090 PF00391 PEP-utilising enzyme, mobile domain BI317_11095 PF00381 PTS HPr component phosphorylation site BI317_11105 PF03668 P-loop ATPase protein family BI317_11110 PF02603 HPr Serine kinase N terminus BI317_11110 PF07475 HPr Serine kinase C-terminal domain BI317_11115 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BI317_11120 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BI317_11125 PF04963 Sigma-54 factor, core binding domain BI317_11125 PF00309 Sigma-54 factor, Activator interacting domain (AID) BI317_11125 PF04552 Sigma-54, DNA binding domain BI317_11130 PF00005 ABC transporter BI317_11135 PF03968 OstA-like protein BI317_11150 PF00571 CBS domain BI317_11150 PF01380 SIS domain BI317_11155 PF01722 BolA-like protein BI317_11160 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BI317_11190 PF00551 Formyl transferase BI317_11195 PF00586 AIR synthase related protein, N-terminal domain BI317_11195 PF02769 AIR synthase related protein, C-terminal domain BI317_11205 PF01594 AI-2E family transporter BI317_11210 PF00308 Bacterial dnaA protein BI317_11225 PF00545 ribonuclease BI317_11230 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BI317_11230 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BI317_11235 PF00459 Inositol monophosphatase family BI317_11240 PF00588 SpoU rRNA Methylase family BI317_11250 PF00990 Diguanylate cyclase, GGDEF domain BI317_11250 PF13188 PAS domain BI317_11250 PF00563 EAL domain BI317_11250 PF03707 Bacterial signalling protein N terminal repeat BI317_11255 PF04055 Radical SAM superfamily BI317_11260 PF08207 Elongation factor P (EF-P) KOW-like domain BI317_11260 PF01132 Elongation factor P (EF-P) OB domain BI317_11260 PF09285 Elongation factor P, C-terminal BI317_11270 PF01979 Amidohydrolase family BI317_11280 PF13419 Haloacid dehalogenase-like hydrolase BI317_11295 PF00295 Glycosyl hydrolases family 28 BI317_11340 PF05985 Ethanolamine ammonia-lyase light chain (EutC) BI317_11345 PF06751 Ethanolamine ammonia lyase large subunit (EutB) BI317_11355 PF01551 Peptidase family M23 BI317_11355 PF08460 Bacterial SH3 domain BI317_11360 PF01979 Amidohydrolase family BI317_11365 PF01809 Putative membrane protein insertion efficiency factor BI317_11370 PF01258 Prokaryotic dksA/traR C4-type zinc finger BI317_11380 PF02657 Fe-S metabolism associated domain BI317_11390 PF09190 DALR domain BI317_11390 PF01406 tRNA synthetases class I (C) catalytic domain BI317_11400 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BI317_11400 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BI317_11405 PF00764 Arginosuccinate synthase BI317_11415 PF00696 Amino acid kinase family BI317_11415 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase BI317_11430 PF00206 Lyase BI317_11445 PF00696 Amino acid kinase family BI317_11445 PF01472 PUA domain BI317_11450 PF00171 Aldehyde dehydrogenase family BI317_11460 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BI317_11460 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BI317_11485 PF01654 Cytochrome bd terminal oxidase subunit I BI317_11490 PF00005 ABC transporter BI317_11490 PF00664 ABC transporter transmembrane region BI317_11495 PF00005 ABC transporter BI317_11495 PF00664 ABC transporter transmembrane region BI317_11505 PF00561 alpha/beta hydrolase fold BI317_11520 PF03918 Cytochrome C biogenesis protein BI317_11525 PF08534 Redoxin BI317_11530 PF01578 Cytochrome C assembly protein BI317_11530 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BI317_11535 PF03100 CcmE BI317_11545 PF01578 Cytochrome C assembly protein BI317_11550 PF03379 CcmB protein BI317_11555 PF00005 ABC transporter BI317_11560 PF00155 Aminotransferase class I and II BI317_11565 PF00795 Carbon-nitrogen hydrolase BI317_11580 PF01479 S4 domain BI317_11580 PF00849 RNA pseudouridylate synthase BI317_11585 PF04079 Segregation and condensation complex subunit ScpB BI317_11590 PF02616 Segregation and condensation protein ScpA BI317_11595 PF03795 YCII-related domain BI317_11605 PF00356 Bacterial regulatory proteins, lacI family BI317_11620 PF01547 Bacterial extracellular solute-binding protein BI317_11625 PF00528 Binding-protein-dependent transport system inner membrane component BI317_11630 PF00528 Binding-protein-dependent transport system inner membrane component BI317_11655 PF00795 Carbon-nitrogen hydrolase BI317_11660 PF04371 Porphyromonas-type peptidyl-arginine deiminase BI317_11670 PF00444 Ribosomal protein L36 BI317_11675 PF02224 Cytidylate kinase BI317_11680 PF00575 S1 RNA binding domain BI317_11685 PF00216 Bacterial DNA-binding protein BI317_11695 PF18073 Rubredoxin metal binding domain BI317_11700 PF00953 Glycosyl transferase family 4 BI317_11705 PF02719 Polysaccharide biosynthesis protein BI317_11715 PF02254 TrkA-N domain BI317_11715 PF00999 Sodium/hydrogen exchanger family BI317_11725 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BI317_11725 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BI317_11730 PF00571 CBS domain BI317_11730 PF00478 IMP dehydrogenase / GMP reductase domain BI317_11735 PF00958 GMP synthase C terminal domain BI317_11735 PF02540 NAD synthase BI317_11735 PF00117 Glutamine amidotransferase class-I BI317_11755 PF05598 Transposase domain (DUF772) BI317_11755 PF01609 Transposase DDE domain BI317_11765 PF13683 Integrase core domain BI317_11765 PF13276 HTH-like domain BI317_11780 PF00561 alpha/beta hydrolase fold BI317_11785 PF01566 Natural resistance-associated macrophage protein BI317_11790 PF01325 Iron dependent repressor, N-terminal DNA binding domain BI317_11790 PF02742 Iron dependent repressor, metal binding and dimerisation domain BI317_11795 PF14437 MafB19-like deaminase BI317_11800 PF00929 Exonuclease BI317_11805 PF05552 Conserved TM helix BI317_11805 PF00924 Mechanosensitive ion channel BI317_11810 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BI317_11810 PF02896 PEP-utilising enzyme, TIM barrel domain BI317_11810 PF00391 PEP-utilising enzyme, mobile domain BI317_11815 PF03618 Kinase/pyrophosphorylase BI317_11835 PF01066 CDP-alcohol phosphatidyltransferase BI317_11845 PF00561 alpha/beta hydrolase fold BI317_11860 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BI317_11860 PF01266 FAD dependent oxidoreductase BI317_11870 PF16921 Tex protein YqgF-like domain BI317_11870 PF09371 Tex-like protein N-terminal domain BI317_11870 PF00575 S1 RNA binding domain BI317_11870 PF17674 HHH domain BI317_11875 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BI317_11875 PF01627 Hpt domain BI317_11875 PF00512 His Kinase A (phospho-acceptor) domain BI317_11875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_11875 PF00672 HAMP domain BI317_11875 PF00072 Response regulator receiver domain BI317_11915 PF00034 Cytochrome c BI317_11925 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI317_11930 PF00873 AcrB/AcrD/AcrF family BI317_11935 PF00873 AcrB/AcrD/AcrF family BI317_11940 PF13683 Integrase core domain BI317_11940 PF13276 HTH-like domain BI317_11945 PF01527 Transposase BI317_11950 PF01081 KDPG and KHG aldolase BI317_11955 PF00920 Dehydratase family BI317_11960 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BI317_11965 PF02685 Glucokinase BI317_11970 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BI317_11970 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BI317_11975 PF17912 MalK OB fold domain BI317_11975 PF00005 ABC transporter BI317_11980 PF01571 Aminomethyltransferase folate-binding domain BI317_11990 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BI317_11995 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BI317_12000 PF00890 FAD binding domain BI317_12000 PF02910 Fumarate reductase flavoprotein C-term BI317_12010 PF13085 2Fe-2S iron-sulfur cluster binding domain BI317_12015 PF03937 Flavinator of succinate dehydrogenase BI317_12025 PF02687 FtsX-like permease family BI317_12025 PF12704 MacB-like periplasmic core domain BI317_12030 PF00005 ABC transporter BI317_12040 PF00753 Metallo-beta-lactamase superfamily BI317_12040 PF03772 Competence protein BI317_12045 PF01618 MotA/TolQ/ExbB proton channel family BI317_12050 PF02472 Biopolymer transport protein ExbD/TolR BI317_12055 PF00664 ABC transporter transmembrane region BI317_12055 PF00005 ABC transporter BI317_12060 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BI317_12070 PF02348 Cytidylyltransferase BI317_12075 PF01451 Low molecular weight phosphotyrosine protein phosphatase BI317_12085 PF08459 UvrC Helix-hairpin-helix N-terminal BI317_12085 PF01541 GIY-YIG catalytic domain BI317_12085 PF02151 UvrB/uvrC motif BI317_12090 PF01066 CDP-alcohol phosphatidyltransferase BI317_12115 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BI317_12115 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BI317_12115 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BI317_12125 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BI317_12140 PF00196 Bacterial regulatory proteins, luxR family BI317_12140 PF00072 Response regulator receiver domain BI317_12145 PF00575 S1 RNA binding domain BI317_12145 PF12111 Polyribonucleotide phosphorylase C terminal BI317_12145 PF10150 Ribonuclease E/G family BI317_12150 PF00849 RNA pseudouridylate synthase BI317_12150 PF01479 S4 domain BI317_12155 PF02535 ZIP Zinc transporter BI317_12230 PF02535 ZIP Zinc transporter BI317_12240 PF01329 Pterin 4 alpha carbinolamine dehydratase BI317_12245 PF01106 NifU-like domain BI317_12305 PF05857 TraX protein BI317_12375 PF01527 Transposase BI317_12380 PF05598 Transposase domain (DUF772) BI317_12380 PF01609 Transposase DDE domain BI317_12385 PF13276 HTH-like domain BI317_12385 PF13683 Integrase core domain BI317_12415 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BI317_12420 PF00072 Response regulator receiver domain BI317_12420 PF00196 Bacterial regulatory proteins, luxR family BI317_12425 PF00512 His Kinase A (phospho-acceptor) domain BI317_12425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_12430 PF01062 Bestrophin, RFP-TM, chloride channel BI317_12440 PF07995 Glucose / Sorbosone dehydrogenase BI317_12460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_12460 PF00512 His Kinase A (phospho-acceptor) domain BI317_12460 PF00672 HAMP domain BI317_12465 PF00072 Response regulator receiver domain BI317_12465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_12465 PF13426 PAS domain BI317_12495 PF01494 FAD binding domain BI317_12505 PF00072 Response regulator receiver domain BI317_12505 PF00486 Transcriptional regulatory protein, C terminal BI317_12525 PF00082 Subtilase family BI317_12525 PF03797 Autotransporter beta-domain BI317_12530 PF12951 Passenger-associated-transport-repeat BI317_12535 PF00563 EAL domain BI317_12535 PF08448 PAS fold BI317_12535 PF08447 PAS fold BI317_12535 PF00990 Diguanylate cyclase, GGDEF domain BI317_12550 PF05974 Domain of unknown function (DUF892) BI317_12560 PF01266 FAD dependent oxidoreductase BI317_12570 PF00483 Nucleotidyl transferase BI317_12580 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BI317_12595 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BI317_12600 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BI317_12600 PF04324 BFD-like [2Fe-2S] binding domain BI317_12600 PF01568 Molydopterin dinucleotide binding domain BI317_12600 PF00384 Molybdopterin oxidoreductase BI317_12605 PF11723 Homotrimeric ring hydroxylase BI317_12605 PF00355 Rieske [2Fe-2S] domain BI317_12610 PF18267 Rubredoxin NAD+ reductase C-terminal domain BI317_12610 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI317_12610 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BI317_12610 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BI317_12610 PF04324 BFD-like [2Fe-2S] binding domain BI317_12615 PF07690 Major Facilitator Superfamily BI317_12630 PF03861 ANTAR domain BI317_12630 PF00072 Response regulator receiver domain BI317_12635 PF10414 Sirohaem synthase dimerisation region BI317_12635 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BI317_12635 PF14824 Sirohaem biosynthesis protein central BI317_12645 PF12804 MobA-like NTP transferase domain BI317_12650 PF00994 Probable molybdopterin binding domain BI317_12650 PF03454 MoeA C-terminal region (domain IV) BI317_12650 PF03453 MoeA N-terminal region (domain I and II) BI317_12660 PF03372 Endonuclease/Exonuclease/phosphatase family BI317_12670 PF00899 ThiF family BI317_12675 PF03454 MoeA C-terminal region (domain IV) BI317_12675 PF00994 Probable molybdopterin binding domain BI317_12675 PF03453 MoeA N-terminal region (domain I and II) BI317_12680 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BI317_12680 PF01926 50S ribosome-binding GTPase BI317_12685 PF01011 PQQ enzyme repeat BI317_12685 PF13360 PQQ-like domain BI317_12695 PF13464 Domain of unknown function (DUF4115) BI317_12705 PF04055 Radical SAM superfamily BI317_12710 PF00334 Nucleoside diphosphate kinase BI317_12720 PF00378 Enoyl-CoA hydratase/isomerase BI317_12720 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BI317_12720 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BI317_12725 PF02803 Thiolase, C-terminal domain BI317_12725 PF00108 Thiolase, N-terminal domain BI317_12730 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BI317_12735 PF00004 ATPase family associated with various cellular activities (AAA) BI317_12735 PF12002 MgsA AAA+ ATPase C terminal BI317_12735 PF16193 AAA C-terminal domain BI317_12740 PF03548 Outer membrane lipoprotein carrier protein LolA BI317_12750 PF01580 FtsK/SpoIIIE family BI317_12750 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BI317_12750 PF09397 Ftsk gamma domain BI317_12750 PF17854 FtsK alpha domain BI317_12755 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI317_12765 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BI317_12770 PF01176 Translation initiation factor 1A / IF-1 BI317_12775 PF17871 AAA lid domain BI317_12775 PF07724 AAA domain (Cdc48 subfamily) BI317_12775 PF00004 ATPase family associated with various cellular activities (AAA) BI317_12775 PF10431 C-terminal, D2-small domain, of ClpB protein BI317_12775 PF02861 Clp amino terminal domain, pathogenicity island component BI317_12780 PF02617 ATP-dependent Clp protease adaptor protein ClpS BI317_12785 PF00293 NUDIX domain BI317_12795 PF04356 Protein of unknown function (DUF489) BI317_12800 PF12729 Four helix bundle sensory module for signal transduction BI317_12800 PF00672 HAMP domain BI317_12800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI317_12825 PF13340 Putative transposase of IS4/5 family (DUF4096) BI317_12835 PF00563 EAL domain BI317_12835 PF03707 Bacterial signalling protein N terminal repeat BI317_12835 PF00990 Diguanylate cyclase, GGDEF domain BI317_12840 PF07730 Histidine kinase BI317_12840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_12845 PF00563 EAL domain BI317_12845 PF00990 Diguanylate cyclase, GGDEF domain BI317_12845 PF03707 Bacterial signalling protein N terminal repeat BI317_12850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_12850 PF00512 His Kinase A (phospho-acceptor) domain BI317_12870 PF00072 Response regulator receiver domain BI317_12870 PF01584 CheW-like domain BI317_12880 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BI317_12880 PF00460 Flagella basal body rod protein BI317_12885 PF03963 Flagellar hook capping protein - N-terminal region BI317_12890 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BI317_12890 PF07559 Flagellar basal body protein FlaE BI317_12890 PF00460 Flagella basal body rod protein BI317_12895 PF00460 Flagella basal body rod protein BI317_12895 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BI317_12910 PF00460 Flagella basal body rod protein BI317_12910 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BI317_12915 PF02107 Flagellar L-ring protein BI317_12920 PF02119 Flagellar P-ring protein BI317_12925 PF10135 Rod binding protein BI317_12925 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BI317_12930 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BI317_12930 PF07196 Flagellin hook IN motif BI317_12940 PF00700 Bacterial flagellin C-terminal helical region BI317_12940 PF00669 Bacterial flagellin N-terminal helical region BI317_12945 PF02465 Flagellar hook-associated protein 2 N-terminus BI317_12945 PF07195 Flagellar hook-associated protein 2 C-terminus BI317_12945 PF07196 Flagellin hook IN motif BI317_12950 PF02561 Flagellar protein FliS BI317_12965 PF00072 Response regulator receiver domain BI317_12965 PF00196 Bacterial regulatory proteins, luxR family BI317_12970 PF04552 Sigma-54, DNA binding domain BI317_12970 PF04963 Sigma-54 factor, core binding domain BI317_12970 PF00309 Sigma-54 factor, Activator interacting domain (AID) BI317_12975 PF00072 Response regulator receiver domain BI317_12975 PF01339 CheB methylesterase BI317_12980 PF02954 Bacterial regulatory protein, Fis family BI317_12980 PF01590 GAF domain BI317_12980 PF00158 Sigma-54 interaction domain BI317_12985 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BI317_12995 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BI317_12995 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BI317_13035 PF05598 Transposase domain (DUF772) BI317_13035 PF01609 Transposase DDE domain BI317_13045 PF01609 Transposase DDE domain BI317_13045 PF05598 Transposase domain (DUF772) BI317_13050 PF00535 Glycosyl transferase family 2 BI317_13050 PF00534 Glycosyl transferases group 1 BI317_13060 PF02049 Flagellar hook-basal body complex protein FliE BI317_13065 PF08345 Flagellar M-ring protein C-terminal BI317_13065 PF01514 Secretory protein of YscJ/FliF family BI317_13070 PF01706 FliG C-terminal domain BI317_13070 PF14841 FliG middle domain BI317_13070 PF14842 FliG N-terminal domain BI317_13080 PF18269 T3SS EscN ATPase C-terminal domain BI317_13080 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BI317_13100 PF02154 Flagellar motor switch protein FliM BI317_13100 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BI317_13105 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BI317_13110 PF04347 Flagellar biosynthesis protein, FliO BI317_13115 PF00813 FliP family BI317_13120 PF01313 Bacterial export proteins, family 3 BI317_13125 PF01311 Bacterial export proteins, family 1 BI317_13130 PF00563 EAL domain BI317_13130 PF00990 Diguanylate cyclase, GGDEF domain BI317_13130 PF13188 PAS domain BI317_13130 PF03707 Bacterial signalling protein N terminal repeat BI317_13135 PF00990 Diguanylate cyclase, GGDEF domain BI317_13135 PF00563 EAL domain BI317_13135 PF03707 Bacterial signalling protein N terminal repeat BI317_13140 PF00563 EAL domain BI317_13140 PF00990 Diguanylate cyclase, GGDEF domain BI317_13140 PF03707 Bacterial signalling protein N terminal repeat BI317_13145 PF01312 FlhB HrpN YscU SpaS Family BI317_13150 PF00771 FHIPEP family BI317_13155 PF00448 SRP54-type protein, GTPase domain BI317_13160 PF10609 NUBPL iron-transfer P-loop NTPase BI317_13165 PF04539 Sigma-70 region 3 BI317_13165 PF04542 Sigma-70 region 2 BI317_13165 PF04545 Sigma-70, region 4 BI317_13170 PF00072 Response regulator receiver domain BI317_13175 PF04344 Chemotaxis phosphatase, CheZ BI317_13180 PF01584 CheW-like domain BI317_13180 PF07194 P2 response regulator binding domain BI317_13180 PF02895 Signal transducing histidine kinase, homodimeric domain BI317_13180 PF01627 Hpt domain BI317_13180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_13185 PF01381 Helix-turn-helix BI317_13195 PF01618 MotA/TolQ/ExbB proton channel family BI317_13200 PF00691 OmpA family BI317_13200 PF13677 Membrane MotB of proton-channel complex MotA/MotB BI317_13205 PF13614 AAA domain BI317_13210 PF01584 CheW-like domain BI317_13220 PF00072 Response regulator receiver domain BI317_13225 PF02895 Signal transducing histidine kinase, homodimeric domain BI317_13225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_13225 PF01584 CheW-like domain BI317_13225 PF09078 CheY binding BI317_13225 PF01627 Hpt domain BI317_13240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI317_13240 PF00672 HAMP domain BI317_13240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI317_13240 PF17200 Single Cache domain 2 BI317_13240 PF17200 Single Cache domain 2 BI317_13240 PF00672 HAMP domain BI317_13245 PF00672 HAMP domain BI317_13245 PF02203 Tar ligand binding domain homologue BI317_13245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI317_13250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI317_13250 PF00672 HAMP domain BI317_13255 PF00672 HAMP domain BI317_13255 PF02203 Tar ligand binding domain homologue BI317_13255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI317_13260 PF02203 Tar ligand binding domain homologue BI317_13260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI317_13260 PF00672 HAMP domain BI317_13265 PF02203 Tar ligand binding domain homologue BI317_13265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI317_13265 PF00672 HAMP domain BI317_13270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI317_13270 PF02203 Tar ligand binding domain homologue BI317_13270 PF00672 HAMP domain BI317_13275 PF00672 HAMP domain BI317_13275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI317_13275 PF02203 Tar ligand binding domain homologue BI317_13290 PF07317 Flagellar regulator YcgR BI317_13290 PF07238 PilZ domain BI317_13295 PF01584 CheW-like domain BI317_13305 PF02203 Tar ligand binding domain homologue BI317_13305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI317_13305 PF00672 HAMP domain BI317_13310 PF03705 CheR methyltransferase, all-alpha domain BI317_13310 PF01739 CheR methyltransferase, SAM binding domain BI317_13315 PF03975 CheD chemotactic sensory transduction BI317_13320 PF00072 Response regulator receiver domain BI317_13320 PF01339 CheB methylesterase BI317_13325 PF00990 Diguanylate cyclase, GGDEF domain BI317_13325 PF03707 Bacterial signalling protein N terminal repeat BI317_13325 PF00563 EAL domain BI317_13335 PF00561 alpha/beta hydrolase fold BI317_13340 PF06434 Aconitate hydratase 2 N-terminus BI317_13340 PF00330 Aconitase family (aconitate hydratase) BI317_13340 PF11791 Aconitate B N-terminal domain BI317_13355 PF00694 Aconitase C-terminal domain BI317_13355 PF00330 Aconitase family (aconitate hydratase) BI317_13365 PF00501 AMP-binding enzyme BI317_13365 PF13193 AMP-binding enzyme C-terminal domain BI317_13375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_13375 PF00512 His Kinase A (phospho-acceptor) domain BI317_13375 PF01627 Hpt domain BI317_13375 PF00072 Response regulator receiver domain BI317_13380 PF00072 Response regulator receiver domain BI317_13380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_13380 PF00512 His Kinase A (phospho-acceptor) domain BI317_13380 PF01627 Hpt domain BI317_13385 PF00072 Response regulator receiver domain BI317_13390 PF01336 OB-fold nucleic acid binding domain BI317_13390 PF00152 tRNA synthetases class II (D, K and N) BI317_13400 PF00072 Response regulator receiver domain BI317_13400 PF04397 LytTr DNA-binding domain BI317_13420 PF02272 DHHA1 domain BI317_13420 PF17768 RecJ OB domain BI317_13420 PF01368 DHH family BI317_13430 PF01272 Transcription elongation factor, GreA/GreB, C-term BI317_13430 PF03449 Transcription elongation factor, N-terminal BI317_13435 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BI317_13435 PF02142 MGS-like domain BI317_13435 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BI317_13445 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BI317_13445 PF00117 Glutamine amidotransferase class-I BI317_13450 PF05173 Dihydrodipicolinate reductase, C-terminus BI317_13450 PF01113 Dihydrodipicolinate reductase, N-terminus BI317_13455 PF03473 MOSC domain BI317_13455 PF03475 3-alpha domain BI317_13460 PF00155 Aminotransferase class I and II BI317_13470 PF07670 Nucleoside recognition BI317_13470 PF02421 Ferrous iron transport protein B BI317_13470 PF07664 Ferrous iron transport protein B C terminus BI317_13480 PF00378 Enoyl-CoA hydratase/isomerase BI317_13485 PF00682 HMGL-like BI317_13490 PF00106 short chain dehydrogenase BI317_13495 PF09285 Elongation factor P, C-terminal BI317_13495 PF08207 Elongation factor P (EF-P) KOW-like domain BI317_13495 PF01132 Elongation factor P (EF-P) OB domain BI317_13515 PF01565 FAD binding domain BI317_13515 PF02913 FAD linked oxidases, C-terminal domain BI317_13520 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BI317_13520 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BI317_13535 PF13520 Amino acid permease BI317_13540 PF13520 Amino acid permease BI317_13555 PF00596 Class II Aldolase and Adducin N-terminal domain BI317_13560 PF03079 ARD/ARD' family BI317_13585 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BI317_13585 PF01502 Phosphoribosyl-AMP cyclohydrolase BI317_13590 PF00977 Histidine biosynthesis protein BI317_13595 PF00977 Histidine biosynthesis protein BI317_13600 PF00117 Glutamine amidotransferase class-I BI317_13605 PF00475 Imidazoleglycerol-phosphate dehydratase BI317_13610 PF00155 Aminotransferase class I and II BI317_13615 PF00815 Histidinol dehydrogenase BI317_13620 PF01634 ATP phosphoribosyltransferase BI317_13620 PF08029 HisG, C-terminal domain BI317_13635 PF03129 Anticodon binding domain BI317_13635 PF13393 Histidyl-tRNA synthetase BI317_13640 PF13545 Crp-like helix-turn-helix domain BI317_13640 PF00027 Cyclic nucleotide-binding domain BI317_13650 PF14821 Threonine synthase N terminus BI317_13650 PF00291 Pyridoxal-phosphate dependent enzyme BI317_13660 PF08544 GHMP kinases C terminal BI317_13660 PF00288 GHMP kinases N terminal domain BI317_13665 PF01842 ACT domain BI317_13665 PF03447 Homoserine dehydrogenase, NAD binding domain BI317_13665 PF13840 ACT domain BI317_13665 PF00742 Homoserine dehydrogenase BI317_13665 PF00696 Amino acid kinase family BI317_13670 PF03073 TspO/MBR family BI317_13680 PF05598 Transposase domain (DUF772) BI317_13680 PF01609 Transposase DDE domain BI317_13705 PF08479 POTRA domain, ShlB-type BI317_13705 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB BI317_13705 PF17287 POTRA domain BI317_13715 PF01522 Polysaccharide deacetylase BI317_13715 PF14883 Hypothetical glycosyl hydrolase family 13 BI317_13725 PF01527 Transposase BI317_13730 PF13276 HTH-like domain BI317_13730 PF13683 Integrase core domain BI317_13765 PF13195 Protein of unknown function (DUF4011) BI317_13765 PF13087 AAA domain BI317_13765 PF13087 AAA domain BI317_13765 PF13086 AAA domain BI317_13765 PF13195 Protein of unknown function (DUF4011) BI317_13765 PF13086 AAA domain BI317_13775 PF01609 Transposase DDE domain BI317_13775 PF05598 Transposase domain (DUF772) BI317_13785 PF01527 Transposase BI317_13790 PF13276 HTH-like domain BI317_13790 PF13683 Integrase core domain BI317_13815 PF02534 Type IV secretory system Conjugative DNA transfer BI317_13850 PF00580 UvrD/REP helicase N-terminal domain BI317_13850 PF13361 UvrD-like helicase C-terminal domain BI317_13855 PF05598 Transposase domain (DUF772) BI317_13855 PF01609 Transposase DDE domain BI317_13885 PF13276 HTH-like domain BI317_13885 PF00665 Integrase core domain BI317_13885 PF13333 Integrase core domain BI317_13890 PF01527 Transposase BI317_13940 PF04002 RadC-like JAB domain BI317_13980 PF00899 ThiF family BI317_13980 PF14461 Prokaryotic E2 family B BI317_14025 PF00171 Aldehyde dehydrogenase family BI317_14040 PF01180 Dihydroorotate dehydrogenase BI317_14045 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BI317_14045 PF01565 FAD binding domain BI317_14050 PF00892 EamA-like transporter family BI317_14060 PF07690 Major Facilitator Superfamily BI317_14065 PF01569 PAP2 superfamily BI317_14070 PF04551 GcpE protein BI317_14080 PF00072 Response regulator receiver domain BI317_14090 PF02013 Cellulose or protein binding domain BI317_14090 PF00150 Cellulase (glycosyl hydrolase family 5) BI317_14095 PF00360 Phytochrome region BI317_14095 PF01590 GAF domain BI317_14095 PF00563 EAL domain BI317_14095 PF00990 Diguanylate cyclase, GGDEF domain BI317_14100 PF00474 Sodium:solute symporter family BI317_14105 PF01915 Glycosyl hydrolase family 3 C-terminal domain BI317_14105 PF00933 Glycosyl hydrolase family 3 N terminal domain BI317_14105 PF14310 Fibronectin type III-like domain BI317_14135 PF00342 Phosphoglucose isomerase BI317_14140 PF02261 Aspartate decarboxylase BI317_14145 PF02569 Pantoate-beta-alanine ligase BI317_14150 PF02548 Ketopantoate hydroxymethyltransferase BI317_14155 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BI317_14160 PF01743 Poly A polymerase head domain BI317_14160 PF12627 Probable RNA and SrmB- binding site of polymerase A BI317_14160 PF12626 Polymerase A arginine-rich C-terminus BI317_14170 PF02649 Type I GTP cyclohydrolase folE2 BI317_14175 PF01520 N-acetylmuramoyl-L-alanine amidase BI317_14195 PF00083 Sugar (and other) transporter BI317_14205 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BI317_14205 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BI317_14215 PF16338 Domain of unknown function (DUF4968) BI317_14215 PF17137 Domain of unknown function (DUF5110) BI317_14215 PF01055 Glycosyl hydrolases family 31 BI317_14230 PF00942 Cellulose binding domain BI317_14230 PF03442 Carbohydrate binding domain X2 BI317_14245 PF03466 LysR substrate binding domain BI317_14245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI317_14250 PF01081 KDPG and KHG aldolase BI317_14255 PF13378 Enolase C-terminal domain-like BI317_14255 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BI317_14260 PF08450 SMP-30/Gluconolactonase/LRE-like region BI317_14275 PF00037 4Fe-4S binding domain BI317_14275 PF11953 Domain of unknown function (DUF3470) BI317_14285 PF00701 Dihydrodipicolinate synthetase family BI317_14300 PF00578 AhpC/TSA family BI317_14305 PF13638 PIN domain BI317_14305 PF02562 PhoH-like protein BI317_14320 PF08543 Phosphomethylpyrimidine kinase BI317_14320 PF02581 Thiamine monophosphate synthase BI317_14345 PF17954 Quercetinase C-terminal cupin domain BI317_14345 PF02678 Pirin BI317_14350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI317_14350 PF08447 PAS fold BI317_14350 PF13426 PAS domain BI317_14360 PF02599 Global regulator protein family BI317_14365 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BI317_14365 PF01411 tRNA synthetases class II (A) BI317_14365 PF02272 DHHA1 domain BI317_14370 PF02631 RecX family BI317_14375 PF00154 recA bacterial DNA recombination protein BI317_14380 PF00717 Peptidase S24-like BI317_14380 PF01726 LexA DNA binding domain BI317_14385 PF03109 ABC1 family BI317_14390 PF07715 TonB-dependent Receptor Plug Domain BI317_14390 PF00593 TonB dependent receptor BI317_14395 PF02464 Competence-damaged protein BI317_14400 PF16360 GTP-binding GTPase Middle Region BI317_14400 PF13167 GTP-binding GTPase N-terminal BI317_14400 PF01926 50S ribosome-binding GTPase BI317_14405 PF17209 Hfq protein BI317_14415 PF00809 Pterin binding enzyme BI317_14420 PF06480 FtsH Extracellular BI317_14420 PF01434 Peptidase family M41 BI317_14420 PF00004 ATPase family associated with various cellular activities (AAA) BI317_14420 PF17862 AAA+ lid domain BI317_14425 PF01728 FtsJ-like methyltransferase BI317_14430 PF01985 CRS1 / YhbY (CRM) domain BI317_14440 PF01476 LysM domain BI317_14440 PF01551 Peptidase family M23 BI317_14445 PF09335 SNARE associated Golgi protein BI317_14455 PF01975 Survival protein SurE BI317_14460 PF01713 Smr domain BI317_14465 PF01142 tRNA pseudouridine synthase D (TruD) BI317_14470 PF02542 YgbB family BI317_14475 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BI317_14480 PF04977 Septum formation initiator BI317_14485 PF00113 Enolase, C-terminal TIM barrel domain BI317_14485 PF03952 Enolase, N-terminal domain BI317_14495 PF00793 DAHP synthetase I family BI317_14500 PF06418 CTP synthase N-terminus BI317_14500 PF00117 Glutamine amidotransferase class-I BI317_14510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_14510 PF00986 DNA gyrase B subunit, carboxyl terminus BI317_14510 PF00204 DNA gyrase B BI317_14510 PF01751 Toprim domain BI317_14525 PF01384 Phosphate transporter family BI317_14540 PF01595 Cyclin M transmembrane N-terminal domain BI317_14540 PF00571 CBS domain BI317_14540 PF03471 Transporter associated domain BI317_14555 PF00296 Luciferase-like monooxygenase BI317_14560 PF07690 Major Facilitator Superfamily BI317_14575 PF00005 ABC transporter BI317_14575 PF00664 ABC transporter transmembrane region BI317_14605 PF13579 Glycosyl transferase 4-like domain BI317_14605 PF00534 Glycosyl transferases group 1 BI317_14610 PF00534 Glycosyl transferases group 1 BI317_14610 PF13439 Glycosyltransferase Family 4 BI317_14640 PF00535 Glycosyl transferase family 2 BI317_14645 PF01943 Polysaccharide biosynthesis protein BI317_14650 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BI317_14655 PF05523 WxcM-like, C-terminal BI317_14670 PF00034 Cytochrome c BI317_14680 PF08281 Sigma-70, region 4 BI317_14680 PF04542 Sigma-70 region 2 BI317_14690 PF00082 Subtilase family BI317_14695 PF01578 Cytochrome C assembly protein BI317_14700 PF04995 Heme exporter protein D (CcmD) BI317_14705 PF03100 CcmE BI317_14710 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BI317_14710 PF01578 Cytochrome C assembly protein BI317_14715 PF08534 Redoxin BI317_14720 PF03918 Cytochrome C biogenesis protein BI317_14755 PF13419 Haloacid dehalogenase-like hydrolase BI317_14780 PF12804 MobA-like NTP transferase domain BI317_14785 PF13478 XdhC Rossmann domain BI317_14785 PF02625 XdhC and CoxI family BI317_14790 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BI317_14790 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BI317_14795 PF00941 FAD binding domain in molybdopterin dehydrogenase BI317_14795 PF03450 CO dehydrogenase flavoprotein C-terminal domain BI317_14800 PF01799 [2Fe-2S] binding domain BI317_14800 PF00111 2Fe-2S iron-sulfur cluster binding domain BI317_14800 PF10518 TAT (twin-arginine translocation) pathway signal sequence BI317_14810 PF04052 TolB amino-terminal domain BI317_14810 PF07676 WD40-like Beta Propeller Repeat BI317_14815 PF00593 TonB dependent receptor BI317_14815 PF07715 TonB-dependent Receptor Plug Domain BI317_14820 PF00436 Single-strand binding protein family BI317_14825 PF00348 Polyprenyl synthetase BI317_14830 PF08245 Mur ligase middle domain BI317_14845 PF01842 ACT domain BI317_14845 PF00696 Amino acid kinase family BI317_14850 PF02567 Phenazine biosynthesis-like protein BI317_14855 PF02567 Phenazine biosynthesis-like protein BI317_14865 PF02566 OsmC-like protein BI317_14870 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BI317_14870 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BI317_14875 PF03652 Holliday junction resolvase BI317_14880 PF02622 Uncharacterized ACR, COG1678 BI317_14885 PF13302 Acetyltransferase (GNAT) domain BI317_14885 PF00958 GMP synthase C terminal domain BI317_14885 PF00117 Glutamine amidotransferase class-I BI317_14885 PF13673 Acetyltransferase (GNAT) domain BI317_14885 PF03352 Methyladenine glycosylase BI317_14895 PF00437 Type II/IV secretion system protein BI317_14900 PF00437 Type II/IV secretion system protein BI317_14910 PF01168 Alanine racemase, N-terminal domain BI317_14915 PF03807 NADP oxidoreductase coenzyme F420-dependent BI317_14915 PF14748 Pyrroline-5-carboxylate reductase dimerisation BI317_14925 PF01476 LysM domain BI317_14925 PF01551 Peptidase family M23 BI317_14950 PF02082 Transcriptional regulator BI317_14955 PF01458 Uncharacterized protein family (UPF0051) BI317_14960 PF00005 ABC transporter BI317_14965 PF01458 Uncharacterized protein family (UPF0051) BI317_14970 PF00266 Aminotransferase class-V BI317_14975 PF00583 Acetyltransferase (GNAT) family BI317_14980 PF00355 Rieske [2Fe-2S] domain BI317_14990 PF07715 TonB-dependent Receptor Plug Domain BI317_14990 PF00593 TonB dependent receptor BI317_14995 PF13640 2OG-Fe(II) oxygenase superfamily BI317_14995 PF18331 PKHD-type hydroxylase C-terminal domain BI317_15020 PF02424 ApbE family BI317_15025 PF00667 FAD binding domain BI317_15025 PF00175 Oxidoreductase NAD-binding domain BI317_15025 PF00258 Flavodoxin BI317_15040 PF01546 Peptidase family M20/M25/M40 BI317_15040 PF07687 Peptidase dimerisation domain BI317_15050 PF01636 Phosphotransferase enzyme family BI317_15055 PF00483 Nucleotidyl transferase BI317_15085 PF00521 DNA gyrase/topoisomerase IV, subunit A BI317_15085 PF03989 DNA gyrase C-terminal domain, beta-propeller BI317_15090 PF01008 Initiation factor 2 subunit family BI317_15105 PF00152 tRNA synthetases class II (D, K and N) BI317_15110 PF01653 NAD-dependent DNA ligase adenylation domain BI317_15110 PF12826 Helix-hairpin-helix motif BI317_15110 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BI317_15110 PF03120 NAD-dependent DNA ligase OB-fold domain BI317_15110 PF00533 BRCA1 C Terminus (BRCT) domain BI317_15115 PF00155 Aminotransferase class I and II BI317_15120 PF04354 ZipA, C-terminal FtsZ-binding domain BI317_15125 PF02463 RecF/RecN/SMC N terminal domain BI317_15130 PF01281 Ribosomal protein L9, N-terminal domain BI317_15130 PF03948 Ribosomal protein L9, C-terminal domain BI317_15135 PF01084 Ribosomal protein S18 BI317_15140 PF01250 Ribosomal protein S6 BI317_15145 PF01521 Iron-sulphur cluster biosynthesis BI317_15155 PF00152 tRNA synthetases class II (D, K and N) BI317_15155 PF01336 OB-fold nucleic acid binding domain BI317_15170 PF04299 Putative FMN-binding domain BI317_15175 PF00484 Carbonic anhydrase BI317_15180 PF06052 3-hydroxyanthranilic acid dioxygenase BI317_15190 PF00266 Aminotransferase class-V BI317_15195 PF01494 FAD binding domain BI317_15200 PF08411 Exonuclease C-terminal BI317_15200 PF00929 Exonuclease BI317_15225 PF01513 ATP-NAD kinase BI317_15230 PF10672 S-adenosylmethionine-dependent methyltransferase BI317_15230 PF01170 Putative RNA methylase family UPF0020 BI317_15230 PF02926 THUMP domain BI317_15270 PF00581 Rhodanese-like domain BI317_15275 PF00293 NUDIX domain BI317_15280 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BI317_15280 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BI317_15285 PF00378 Enoyl-CoA hydratase/isomerase BI317_15295 PF00730 HhH-GPD superfamily base excision DNA repair protein BI317_15295 PF10576 Iron-sulfur binding domain of endonuclease III BI317_15295 PF00633 Helix-hairpin-helix motif BI317_15300 PF05598 Transposase domain (DUF772) BI317_15300 PF01609 Transposase DDE domain BI317_15305 PF01609 Transposase DDE domain BI317_15305 PF05598 Transposase domain (DUF772) BI317_15315 PF13340 Putative transposase of IS4/5 family (DUF4096) BI317_15320 PF01740 STAS domain BI317_15320 PF00916 Sulfate permease family BI317_15325 PF00484 Carbonic anhydrase BI317_15340 PF12849 PBP superfamily domain BI317_15345 PF12849 PBP superfamily domain BI317_15350 PF00528 Binding-protein-dependent transport system inner membrane component BI317_15355 PF00528 Binding-protein-dependent transport system inner membrane component BI317_15360 PF00005 ABC transporter BI317_15365 PF01895 PhoU domain BI317_15375 PF00929 Exonuclease BI317_15380 PF07694 5TMR of 5TMR-LYT BI317_15380 PF00990 Diguanylate cyclase, GGDEF domain BI317_15385 PF08032 RNA 2'-O ribose methyltransferase substrate binding BI317_15385 PF00588 SpoU rRNA Methylase family BI317_15395 PF17876 Cold shock domain BI317_15395 PF00773 RNB domain BI317_15395 PF08206 Ribonuclease B OB domain BI317_15395 PF00575 S1 RNA binding domain BI317_15395 PF08461 Ribonuclease R winged-helix domain BI317_15410 PF01609 Transposase DDE domain BI317_15410 PF05598 Transposase domain (DUF772) BI317_15415 PF02770 Acyl-CoA dehydrogenase, middle domain BI317_15415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BI317_15415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BI317_15420 PF01209 ubiE/COQ5 methyltransferase family BI317_15425 PF02574 Homocysteine S-methyltransferase BI317_15425 PF00809 Pterin binding enzyme BI317_15425 PF02310 B12 binding domain BI317_15425 PF02607 B12 binding domain BI317_15425 PF02965 Vitamin B12 dependent methionine synthase, activation domain BI317_15430 PF02310 B12 binding domain BI317_15430 PF02607 B12 binding domain BI317_15430 PF02965 Vitamin B12 dependent methionine synthase, activation domain BI317_15430 PF00809 Pterin binding enzyme BI317_15430 PF02574 Homocysteine S-methyltransferase BI317_15445 PF00294 pfkB family carbohydrate kinase BI317_15450 PF07690 Major Facilitator Superfamily BI317_15470 PF04102 SlyX BI317_15475 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BI317_15475 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BI317_15475 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BI317_15485 PF00255 Glutathione peroxidase BI317_15495 PF00392 Bacterial regulatory proteins, gntR family BI317_15500 PF00005 ABC transporter BI317_15525 PF10415 Fumarase C C-terminus BI317_15525 PF00206 Lyase BI317_15530 PF01595 Cyclin M transmembrane N-terminal domain BI317_15530 PF00571 CBS domain BI317_15530 PF03471 Transporter associated domain BI317_15535 PF08328 Adenylosuccinate lyase C-terminal BI317_15535 PF00206 Lyase BI317_15550 PF08007 Cupin superfamily protein BI317_15560 PF16078 2-oxoglutarate dehydrogenase N-terminus BI317_15560 PF00676 Dehydrogenase E1 component BI317_15560 PF16870 2-oxoglutarate dehydrogenase C-terminal BI317_15560 PF02779 Transketolase, pyrimidine binding domain BI317_15565 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BI317_15565 PF00364 Biotin-requiring enzyme BI317_15565 PF02817 e3 binding domain BI317_15570 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BI317_15570 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI317_15575 PF03641 Possible lysine decarboxylase BI317_15580 PF01205 Uncharacterized protein family UPF0029 BI317_15585 PF00005 ABC transporter BI317_15585 PF00664 ABC transporter transmembrane region BI317_15590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI317_15590 PF03466 LysR substrate binding domain BI317_15595 PF00664 ABC transporter transmembrane region BI317_15595 PF00005 ABC transporter BI317_15595 PF03412 Peptidase C39 family BI317_15620 PF08543 Phosphomethylpyrimidine kinase BI317_15625 PF00684 DnaJ central domain BI317_15625 PF00226 DnaJ domain BI317_15625 PF01556 DnaJ C terminal domain BI317_15630 PF00012 Hsp70 protein BI317_15635 PF01025 GrpE BI317_15640 PF01628 HrcA protein C terminal domain BI317_15640 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding BI317_15645 PF02463 RecF/RecN/SMC N terminal domain BI317_15650 PF01475 Ferric uptake regulator family BI317_15655 PF04355 SmpA / OmlA family BI317_15660 PF03658 RnfH family Ubiquitin BI317_15670 PF01668 SmpB protein BI317_15675 PF00082 Subtilase family BI317_15685 PF13356 Arm DNA-binding domain BI317_15685 PF00589 Phage integrase family BI317_15755 PF06791 Prophage tail length tape measure protein BI317_15915 PF00772 DnaB-like helicase N terminal domain BI317_15915 PF03796 DnaB-like helicase C terminal domain BI317_15940 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT BI317_16025 PF00145 C-5 cytosine-specific DNA methylase BI317_16085 PF00990 Diguanylate cyclase, GGDEF domain BI317_16095 PF08448 PAS fold BI317_16095 PF00990 Diguanylate cyclase, GGDEF domain BI317_16100 PF02321 Outer membrane efflux protein BI317_16105 PF00106 short chain dehydrogenase BI317_16110 PF00873 AcrB/AcrD/AcrF family BI317_16115 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI317_16115 PF00529 HlyD membrane-fusion protein of T1SS BI317_16130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI317_16130 PF03466 LysR substrate binding domain BI317_16140 PF04070 Domain of unknown function (DUF378) BI317_16155 PF03466 LysR substrate binding domain BI317_16155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI317_16180 PF00664 ABC transporter transmembrane region BI317_16180 PF00005 ABC transporter BI317_16195 PF00144 Beta-lactamase BI317_16200 PF03737 Aldolase/RraA BI317_16215 PF00072 Response regulator receiver domain BI317_16215 PF00990 Diguanylate cyclase, GGDEF domain BI317_16220 PF00849 RNA pseudouridylate synthase BI317_16220 PF01479 S4 domain BI317_16225 PF00990 Diguanylate cyclase, GGDEF domain BI317_16225 PF00563 EAL domain BI317_16225 PF08448 PAS fold BI317_16230 PF00270 DEAD/DEAH box helicase BI317_16230 PF00271 Helicase conserved C-terminal domain BI317_16230 PF03880 DbpA RNA binding domain BI317_16235 PF08281 Sigma-70, region 4 BI317_16235 PF04542 Sigma-70 region 2 BI317_16255 PF01494 FAD binding domain BI317_16280 PF00730 HhH-GPD superfamily base excision DNA repair protein BI317_16280 PF12833 Helix-turn-helix domain BI317_16280 PF02805 Metal binding domain of Ada BI317_16280 PF06029 AlkA N-terminal domain BI317_16285 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BI317_16285 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BI317_16295 PF00654 Voltage gated chloride channel BI317_16310 PF07715 TonB-dependent Receptor Plug Domain BI317_16310 PF00593 TonB dependent receptor BI317_16330 PF00082 Subtilase family BI317_16340 PF00082 Subtilase family BI317_16340 PF05922 Peptidase inhibitor I9 BI317_16340 PF02225 PA domain BI317_16340 PF13860 FlgD Ig-like domain BI317_16345 PF00248 Aldo/keto reductase family BI317_16350 PF07690 Major Facilitator Superfamily BI317_16355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI317_16355 PF03466 LysR substrate binding domain BI317_16375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI317_16375 PF03466 LysR substrate binding domain BI317_16385 PF00248 Aldo/keto reductase family BI317_16390 PF00440 Bacterial regulatory proteins, tetR family BI317_16390 PF16859 Tetracyclin repressor-like, C-terminal domain BI317_16395 PF02321 Outer membrane efflux protein BI317_16400 PF00873 AcrB/AcrD/AcrF family BI317_16405 PF00529 HlyD membrane-fusion protein of T1SS BI317_16405 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI317_16420 PF01475 Ferric uptake regulator family BI317_16425 PF00749 tRNA synthetases class I (E and Q), catalytic domain BI317_16450 PF06123 Inner membrane protein CreD BI317_16460 PF00512 His Kinase A (phospho-acceptor) domain BI317_16460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_16460 PF00672 HAMP domain BI317_16465 PF00072 Response regulator receiver domain BI317_16465 PF00486 Transcriptional regulatory protein, C terminal BI317_16470 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ BI317_16485 PF02559 CarD-like/TRCF domain BI317_16485 PF00270 DEAD/DEAH box helicase BI317_16485 PF00271 Helicase conserved C-terminal domain BI317_16485 PF03461 TRCF domain BI317_16485 PF17757 UvrB interaction domain BI317_16495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_16495 PF01584 CheW-like domain BI317_16495 PF09078 CheY binding BI317_16495 PF02895 Signal transducing histidine kinase, homodimeric domain BI317_16495 PF01627 Hpt domain BI317_16500 PF02203 Tar ligand binding domain homologue BI317_16500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI317_16500 PF00672 HAMP domain BI317_16505 PF01584 CheW-like domain BI317_16510 PF03707 Bacterial signalling protein N terminal repeat BI317_16510 PF00990 Diguanylate cyclase, GGDEF domain BI317_16510 PF00563 EAL domain BI317_16515 PF03705 CheR methyltransferase, all-alpha domain BI317_16515 PF01739 CheR methyltransferase, SAM binding domain BI317_16520 PF01339 CheB methylesterase BI317_16520 PF00072 Response regulator receiver domain BI317_16525 PF13091 PLD-like domain BI317_16530 PF01431 Peptidase family M13 BI317_16530 PF05649 Peptidase family M13 BI317_16540 PF00300 Histidine phosphatase superfamily (branch 1) BI317_16545 PF04493 Endonuclease V BI317_16550 PF05726 Pirin C-terminal cupin domain BI317_16550 PF02678 Pirin BI317_16565 PF05726 Pirin C-terminal cupin domain BI317_16565 PF02678 Pirin BI317_16570 PF13722 5TM C-terminal transporter carbon starvation CstA BI317_16570 PF02554 Carbon starvation protein CstA BI317_16575 PF04328 Selenoprotein, putative BI317_16590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_16590 PF00072 Response regulator receiver domain BI317_16590 PF13426 PAS domain BI317_16595 PF06745 KaiC BI317_16600 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BI317_16600 PF01627 Hpt domain BI317_16600 PF00072 Response regulator receiver domain BI317_16600 PF00672 HAMP domain BI317_16600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_16600 PF00512 His Kinase A (phospho-acceptor) domain BI317_16605 PF08448 PAS fold BI317_16605 PF00072 Response regulator receiver domain BI317_16605 PF00512 His Kinase A (phospho-acceptor) domain BI317_16605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_16605 PF13188 PAS domain BI317_16620 PF00672 HAMP domain BI317_16620 PF02203 Tar ligand binding domain homologue BI317_16620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI317_16705 PF05598 Transposase domain (DUF772) BI317_16705 PF01609 Transposase DDE domain BI317_16745 PF04002 RadC-like JAB domain BI317_16775 PF13340 Putative transposase of IS4/5 family (DUF4096) BI317_16790 PF18255 DNA processing protein A sterile alpha motif domain BI317_16790 PF02481 DNA recombination-mediator protein A BI317_16815 PF02954 Bacterial regulatory protein, Fis family BI317_16815 PF00072 Response regulator receiver domain BI317_16815 PF00158 Sigma-54 interaction domain BI317_16840 PF07484 Phage Tail Collar Domain BI317_16850 PF03793 PASTA domain BI317_16850 PF00069 Protein kinase domain BI317_16915 PF12462 DNA helicase IV / RNA helicase N terminal BI317_16915 PF00580 UvrD/REP helicase N-terminal domain BI317_16915 PF13361 UvrD-like helicase C-terminal domain BI317_16920 PF01734 Patatin-like phospholipase BI317_16950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI317_16950 PF03466 LysR substrate binding domain BI317_16960 PF13340 Putative transposase of IS4/5 family (DUF4096) BI317_16965 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BI317_16965 PF02403 Seryl-tRNA synthetase N-terminal domain BI317_16970 PF03544 Gram-negative bacterial TonB protein C-terminal BI317_16980 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BI317_16985 PF01842 ACT domain BI317_16985 PF01817 Chorismate mutase type II BI317_16985 PF00800 Prephenate dehydratase BI317_16990 PF00266 Aminotransferase class-V BI317_16995 PF00174 Oxidoreductase molybdopterin binding domain BI317_17000 PF01794 Ferric reductase like transmembrane component BI317_17035 PF07969 Amidohydrolase family BI317_17040 PF00221 Aromatic amino acid lyase BI317_17050 PF17391 Urocanase N-terminal domain BI317_17050 PF17392 Urocanase C-terminal domain BI317_17050 PF01175 Urocanase Rossmann-like domain BI317_17060 PF07690 Major Facilitator Superfamily BI317_17065 PF00512 His Kinase A (phospho-acceptor) domain BI317_17065 PF01627 Hpt domain BI317_17065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_17065 PF00672 HAMP domain BI317_17065 PF17149 Periplasmic sensor domain found in signal transduction proteins BI317_17065 PF00072 Response regulator receiver domain BI317_17090 PF00072 Response regulator receiver domain BI317_17090 PF01627 Hpt domain BI317_17090 PF00512 His Kinase A (phospho-acceptor) domain BI317_17090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_17095 PF04264 YceI-like domain BI317_17100 PF01292 Prokaryotic cytochrome b561 BI317_17110 PF00313 'Cold-shock' DNA-binding domain BI317_17120 PF03315 Serine dehydratase beta chain BI317_17120 PF03313 Serine dehydratase alpha chain BI317_17125 PF12697 Alpha/beta hydrolase family BI317_17130 PF00696 Amino acid kinase family BI317_17130 PF00742 Homoserine dehydrogenase BI317_17130 PF03447 Homoserine dehydrogenase, NAD binding domain BI317_17135 PF01053 Cys/Met metabolism PLP-dependent enzyme BI317_17140 PF00561 alpha/beta hydrolase fold BI317_17145 PF08460 Bacterial SH3 domain BI317_17145 PF01551 Peptidase family M23 BI317_17150 PF16658 Class II release factor RF3, C-terminal domain BI317_17150 PF00009 Elongation factor Tu GTP binding domain BI317_17155 PF03006 Haemolysin-III related BI317_17160 PF05170 AsmA family BI317_17170 PF00571 CBS domain BI317_17170 PF00478 IMP dehydrogenase / GMP reductase domain BI317_17175 PF00535 Glycosyl transferase family 2 BI317_17180 PF00912 Transglycosylase BI317_17185 PF01430 Hsp33 protein BI317_17195 PF00593 TonB dependent receptor BI317_17195 PF07715 TonB-dependent Receptor Plug Domain BI317_17200 PF00440 Bacterial regulatory proteins, tetR family BI317_17205 PF00561 alpha/beta hydrolase fold BI317_17210 PF09317 Domain of unknown function (DUF1974) BI317_17210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BI317_17210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BI317_17245 PF01597 Glycine cleavage H-protein BI317_17250 PF01571 Aminomethyltransferase folate-binding domain BI317_17250 PF08669 Glycine cleavage T-protein C-terminal barrel domain BI317_17255 PF02694 Uncharacterised BCR, YnfA/UPF0060 family BI317_17260 PF03819 MazG nucleotide pyrophosphohydrolase domain BI317_17265 PF00459 Inositol monophosphatase family BI317_17270 PF00293 NUDIX domain BI317_17275 PF00202 Aminotransferase class-III BI317_17280 PF04452 RNA methyltransferase BI317_17300 PF00704 Glycosyl hydrolases family 18 BI317_17300 PF01476 LysM domain BI317_17320 PF01915 Glycosyl hydrolase family 3 C-terminal domain BI317_17320 PF07691 PA14 domain BI317_17320 PF14310 Fibronectin type III-like domain BI317_17320 PF00933 Glycosyl hydrolase family 3 N terminal domain BI317_17340 PF01301 Glycosyl hydrolases family 35 BI317_17345 PF13520 Amino acid permease BI317_17355 PF11975 Family 4 glycosyl hydrolase C-terminal domain BI317_17355 PF02056 Family 4 glycosyl hydrolase BI317_17365 PF07971 Glycosyl hydrolase family 92 BI317_17365 PF17678 Glycosyl hydrolase family 92 N-terminal domain BI317_17370 PF01301 Glycosyl hydrolases family 35 BI317_17380 PF01609 Transposase DDE domain BI317_17380 PF05598 Transposase domain (DUF772) BI317_17395 PF01527 Transposase BI317_17455 PF03932 CutC family BI317_17460 PF01112 Asparaginase BI317_17465 PF12034 Domain of unknown function (DUF3520) BI317_17465 PF00092 von Willebrand factor type A domain BI317_17465 PF12450 von Willebrand factor BI317_17470 PF04542 Sigma-70 region 2 BI317_17470 PF08281 Sigma-70, region 4 BI317_17485 PF13302 Acetyltransferase (GNAT) domain BI317_17495 PF00072 Response regulator receiver domain BI317_17495 PF01339 CheB methylesterase BI317_17500 PF01584 CheW-like domain BI317_17500 PF00072 Response regulator receiver domain BI317_17500 PF01627 Hpt domain BI317_17500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_17505 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term BI317_17505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI317_17510 PF01584 CheW-like domain BI317_17515 PF00072 Response regulator receiver domain BI317_17520 PF00072 Response regulator receiver domain BI317_17525 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BI317_17525 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BI317_17535 PF00814 Glycoprotease family BI317_17540 PF13307 Helicase C-terminal domain BI317_17540 PF04851 Type III restriction enzyme, res subunit BI317_17550 PF14814 Bifunctional transglycosylase second domain BI317_17550 PF00905 Penicillin binding protein transpeptidase domain BI317_17550 PF00912 Transglycosylase BI317_17565 PF13291 ACT domain BI317_17565 PF04607 Region found in RelA / SpoT proteins BI317_17565 PF02824 TGS domain BI317_17570 PF08042 PqqA family BI317_17575 PF12706 Beta-lactamase superfamily domain BI317_17580 PF03070 TENA/THI-4/PQQC family BI317_17585 PF05402 Coenzyme PQQ synthesis protein D (PqqD) BI317_17590 PF13186 Iron-sulfur cluster-binding domain BI317_17590 PF04055 Radical SAM superfamily BI317_17600 PF02685 Glucokinase BI317_17610 PF00270 DEAD/DEAH box helicase BI317_17610 PF11898 Domain of unknown function (DUF3418) BI317_17610 PF04408 Helicase associated domain (HA2) BI317_17610 PF00271 Helicase conserved C-terminal domain BI317_17610 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BI317_17615 PF00210 Ferritin-like domain BI317_17620 PF09382 RQC domain BI317_17620 PF16124 RecQ zinc-binding BI317_17620 PF00570 HRDC domain BI317_17620 PF00271 Helicase conserved C-terminal domain BI317_17620 PF00270 DEAD/DEAH box helicase BI317_17635 PF00849 RNA pseudouridylate synthase BI317_17635 PF01479 S4 domain BI317_17670 PF13581 Histidine kinase-like ATPase domain BI317_17670 PF07536 HWE histidine kinase BI317_17670 PF13426 PAS domain BI317_17675 PF06508 Queuosine biosynthesis protein QueC BI317_17715 PF00248 Aldo/keto reductase family BI317_17720 PF04055 Radical SAM superfamily BI317_17730 PF00691 OmpA family BI317_17735 PF07676 WD40-like Beta Propeller Repeat BI317_17735 PF04052 TolB amino-terminal domain BI317_17745 PF02472 Biopolymer transport protein ExbD/TolR BI317_17750 PF01618 MotA/TolQ/ExbB proton channel family BI317_17755 PF03061 Thioesterase superfamily BI317_17760 PF05491 RuvB C-terminal winged helix domain BI317_17760 PF17864 RuvB AAA lid domain BI317_17760 PF05496 Holliday junction DNA helicase RuvB P-loop domain BI317_17765 PF02705 K+ potassium transporter BI317_17775 PF01330 RuvA N terminal domain BI317_17775 PF07499 RuvA, C-terminal domain BI317_17780 PF02075 Crossover junction endodeoxyribonuclease RuvC BI317_17785 PF01709 Transcriptional regulator BI317_17805 PF01336 OB-fold nucleic acid binding domain BI317_17805 PF00152 tRNA synthetases class II (D, K and N) BI317_17805 PF02938 GAD domain BI317_17825 PF07690 Major Facilitator Superfamily BI317_17840 PF05506 Domain of unknown function (DUF756) BI317_17840 PF04185 Phosphoesterase family BI317_17855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI317_17855 PF03466 LysR substrate binding domain BI317_17865 PF12848 ABC transporter BI317_17865 PF00005 ABC transporter BI317_17870 PF07715 TonB-dependent Receptor Plug Domain BI317_17870 PF00593 TonB dependent receptor BI317_17875 PF07715 TonB-dependent Receptor Plug Domain BI317_17875 PF00593 TonB dependent receptor BI317_17880 PF07715 TonB-dependent Receptor Plug Domain BI317_17880 PF00593 TonB dependent receptor BI317_17890 PF00067 Cytochrome P450 BI317_17895 PF00999 Sodium/hydrogen exchanger family BI317_17895 PF02254 TrkA-N domain BI317_17905 PF07715 TonB-dependent Receptor Plug Domain BI317_17905 PF00593 TonB dependent receptor BI317_17905 PF07660 Secretin and TonB N terminus short domain BI317_17915 PF04183 IucA / IucC family BI317_17915 PF06276 Ferric iron reductase FhuF-like transporter BI317_17920 PF07690 Major Facilitator Superfamily BI317_17925 PF06276 Ferric iron reductase FhuF-like transporter BI317_17925 PF04183 IucA / IucC family BI317_17930 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BI317_17930 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BI317_17945 PF02277 Phosphoribosyltransferase BI317_17955 PF07715 TonB-dependent Receptor Plug Domain BI317_17955 PF00593 TonB dependent receptor BI317_17960 PF01053 Cys/Met metabolism PLP-dependent enzyme BI317_17965 PF10431 C-terminal, D2-small domain, of ClpB protein BI317_17965 PF17871 AAA lid domain BI317_17965 PF07724 AAA domain (Cdc48 subfamily) BI317_17965 PF00004 ATPase family associated with various cellular activities (AAA) BI317_17965 PF02861 Clp amino terminal domain, pathogenicity island component BI317_17970 PF00005 ABC transporter BI317_17975 PF00528 Binding-protein-dependent transport system inner membrane component BI317_17980 PF09084 NMT1/THI5 like BI317_17985 PF00248 Aldo/keto reductase family BI317_17990 PF00296 Luciferase-like monooxygenase BI317_17995 PF00593 TonB dependent receptor BI317_17995 PF07715 TonB-dependent Receptor Plug Domain BI317_18000 PF01541 GIY-YIG catalytic domain BI317_18040 PF07715 TonB-dependent Receptor Plug Domain BI317_18040 PF00593 TonB dependent receptor BI317_18045 PF02358 Trehalose-phosphatase BI317_18050 PF00723 Glycosyl hydrolases family 15 BI317_18055 PF00982 Glycosyltransferase family 20 BI317_18060 PF01011 PQQ enzyme repeat BI317_18065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI317_18065 PF02203 Tar ligand binding domain homologue BI317_18065 PF00672 HAMP domain BI317_18070 PF04134 Protein of unknown function, DUF393 BI317_18085 PF00849 RNA pseudouridylate synthase BI317_18090 PF13525 Outer membrane lipoprotein BI317_18100 PF02540 NAD synthase BI317_18100 PF00795 Carbon-nitrogen hydrolase BI317_18130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI317_18130 PF03466 LysR substrate binding domain BI317_18135 PF02629 CoA binding domain BI317_18135 PF00549 CoA-ligase BI317_18140 PF00549 CoA-ligase BI317_18140 PF08442 ATP-grasp domain BI317_18145 PF00512 His Kinase A (phospho-acceptor) domain BI317_18145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_18150 PF00072 Response regulator receiver domain BI317_18150 PF02954 Bacterial regulatory protein, Fis family BI317_18150 PF00158 Sigma-54 interaction domain BI317_18155 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BI317_18155 PF00437 Type II/IV secretion system protein BI317_18160 PF00114 Pilin (bacterial filament) BI317_18160 PF07963 Prokaryotic N-terminal methylation motif BI317_18165 PF00482 Type II secretion system (T2SS), protein F BI317_18170 PF01478 Type IV leader peptidase family BI317_18170 PF06750 Bacterial Peptidase A24 N-terminal domain BI317_18175 PF01121 Dephospho-CoA kinase BI317_18195 PF00989 PAS fold BI317_18195 PF00512 His Kinase A (phospho-acceptor) domain BI317_18195 PF11808 Phosphate regulon sensor protein PhoR BI317_18195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_18200 PF00072 Response regulator receiver domain BI317_18200 PF00486 Transcriptional regulatory protein, C terminal BI317_18205 PF08443 RimK-like ATP-grasp domain BI317_18205 PF18030 RimK PreATP-grasp domain BI317_18210 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BI317_18210 PF00128 Alpha amylase, catalytic domain BI317_18240 PF00672 HAMP domain BI317_18240 PF02203 Tar ligand binding domain homologue BI317_18240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI317_18245 PF09335 SNARE associated Golgi protein BI317_18255 PF01527 Transposase BI317_18260 PF13683 Integrase core domain BI317_18260 PF13276 HTH-like domain BI317_18305 PF13683 Integrase core domain BI317_18305 PF13276 HTH-like domain BI317_18310 PF01527 Transposase BI317_18330 PF13333 Integrase core domain BI317_18330 PF00665 Integrase core domain BI317_18330 PF13276 HTH-like domain BI317_18335 PF01527 Transposase BI317_18340 PF02384 N-6 DNA Methylase BI317_18340 PF12161 HsdM N-terminal domain BI317_18395 PF13683 Integrase core domain BI317_18395 PF13276 HTH-like domain BI317_18400 PF01527 Transposase BI317_18410 PF01527 Transposase BI317_18415 PF13276 HTH-like domain BI317_18415 PF13683 Integrase core domain BI317_18450 PF04610 TrbL/VirB6 plasmid conjugal transfer protein BI317_18490 PF01609 Transposase DDE domain BI317_18490 PF05598 Transposase domain (DUF772) BI317_18505 PF13476 AAA domain BI317_18530 PF04221 RelB antitoxin BI317_18560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI317_18560 PF03466 LysR substrate binding domain BI317_18565 PF01381 Helix-turn-helix BI317_18595 PF01527 Transposase BI317_18600 PF13333 Integrase core domain BI317_18600 PF13276 HTH-like domain BI317_18600 PF00665 Integrase core domain BI317_18615 PF00657 GDSL-like Lipase/Acylhydrolase BI317_18615 PF03797 Autotransporter beta-domain BI317_18625 PF05690 Thiazole biosynthesis protein ThiG BI317_18635 PF02390 Putative methyltransferase BI317_18640 PF02080 TrkA-C domain BI317_18640 PF03600 Citrate transporter BI317_18655 PF01557 Fumarylacetoacetate (FAA) hydrolase family BI317_18660 PF01741 Large-conductance mechanosensitive channel, MscL BI317_18670 PF00356 Bacterial regulatory proteins, lacI family BI317_18680 PF00703 Glycosyl hydrolases family 2 BI317_18680 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain BI317_18680 PF02837 Glycosyl hydrolases family 2, sugar binding domain BI317_18685 PF10566 Glycoside hydrolase 97 BI317_18685 PF14508 Glycosyl-hydrolase 97 N-terminal BI317_18685 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation BI317_18695 PF00135 Carboxylesterase family BI317_18700 PF00588 SpoU rRNA Methylase family BI317_18700 PF08032 RNA 2'-O ribose methyltransferase substrate binding BI317_18720 PF00873 AcrB/AcrD/AcrF family BI317_18725 PF00529 HlyD membrane-fusion protein of T1SS BI317_18725 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI317_18730 PF00009 Elongation factor Tu GTP binding domain BI317_18735 PF01507 Phosphoadenosine phosphosulfate reductase family BI317_18740 PF00175 Oxidoreductase NAD-binding domain BI317_18740 PF00667 FAD binding domain BI317_18740 PF00258 Flavodoxin BI317_18745 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BI317_18745 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BI317_18750 PF01507 Phosphoadenosine phosphosulfate reductase family BI317_18770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_18770 PF00512 His Kinase A (phospho-acceptor) domain BI317_18770 PF01627 Hpt domain BI317_18770 PF00072 Response regulator receiver domain BI317_18770 PF00672 HAMP domain BI317_18780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI317_18780 PF03466 LysR substrate binding domain BI317_18785 PF14824 Sirohaem biosynthesis protein central BI317_18785 PF10414 Sirohaem synthase dimerisation region BI317_18785 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BI317_18790 PF00291 Pyridoxal-phosphate dependent enzyme BI317_18800 PF01661 Macro domain BI317_18805 PF00274 Fructose-bisphosphate aldolase class-I BI317_18815 PF02887 Pyruvate kinase, alpha/beta domain BI317_18815 PF00224 Pyruvate kinase, barrel domain BI317_18825 PF00162 Phosphoglycerate kinase BI317_18845 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BI317_18845 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BI317_18860 PF03922 OmpW family BI317_18870 PF04273 Putative phosphatase (DUF442) BI317_18870 PF00753 Metallo-beta-lactamase superfamily BI317_18880 PF00528 Binding-protein-dependent transport system inner membrane component BI317_18885 PF03459 TOBE domain BI317_18885 PF00005 ABC transporter BI317_18900 PF03965 Penicillinase repressor BI317_18920 PF01476 LysM domain BI317_18920 PF03734 L,D-transpeptidase catalytic domain BI317_18940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI317_18940 PF03466 LysR substrate binding domain BI317_18945 PF00593 TonB dependent receptor BI317_18945 PF07715 TonB-dependent Receptor Plug Domain BI317_18955 PF00456 Transketolase, thiamine diphosphate binding domain BI317_18955 PF02780 Transketolase, C-terminal domain BI317_18955 PF02779 Transketolase, pyrimidine binding domain BI317_18960 PF00375 Sodium:dicarboxylate symporter family BI317_18975 PF13519 von Willebrand factor type A domain BI317_18975 PF07584 Aerotolerance regulator N-terminal BI317_18995 PF07726 ATPase family associated with various cellular activities (AAA) BI317_18995 PF17863 AAA lid domain BI317_19000 PF11741 AMIN domain BI317_19000 PF07660 Secretin and TonB N terminus short domain BI317_19000 PF00263 Bacterial type II and III secretion system protein BI317_19000 PF03958 Bacterial type II/III secretion system short domain BI317_19025 PF00905 Penicillin binding protein transpeptidase domain BI317_19025 PF17092 Penicillin-binding protein OB-like domain BI317_19025 PF00912 Transglycosylase BI317_19035 PF00285 Citrate synthase, C-terminal domain BI317_19040 PF01197 Ribosomal protein L31 BI317_19045 PF01156 Inosine-uridine preferring nucleoside hydrolase BI317_19050 PF00271 Helicase conserved C-terminal domain BI317_19050 PF00270 DEAD/DEAH box helicase BI317_19050 PF17191 RecG wedge domain BI317_19055 PF01042 Endoribonuclease L-PSP BI317_19060 PF02824 TGS domain BI317_19060 PF04607 Region found in RelA / SpoT proteins BI317_19060 PF13291 ACT domain BI317_19065 PF01192 RNA polymerase Rpb6 BI317_19070 PF00625 Guanylate kinase BI317_19075 PF08340 Domain of unknown function (DUF1732) BI317_19075 PF03755 YicC-like family, N-terminal region BI317_19080 PF01138 3' exoribonuclease family, domain 1 BI317_19080 PF03725 3' exoribonuclease family, domain 2 BI317_19085 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BI317_19090 PF01725 Ham1 family BI317_19095 PF06969 HemN C-terminal domain BI317_19095 PF04055 Radical SAM superfamily BI317_19110 PF00557 Metallopeptidase family M24 BI317_19115 PF00557 Metallopeptidase family M24 BI317_19115 PF05195 Aminopeptidase P, N-terminal domain BI317_19120 PF03695 Uncharacterised protein family (UPF0149) BI317_19130 PF05164 Cell division protein ZapA BI317_19140 PF01812 5-formyltetrahydrofolate cyclo-ligase family BI317_19150 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BI317_19160 PF13369 Transglutaminase-like superfamily BI317_19165 PF00301 Rubredoxin BI317_19170 PF02581 Thiamine monophosphate synthase BI317_19185 PF00202 Aminotransferase class-III BI317_19190 PF17874 MalT-like TPR region BI317_19190 PF00196 Bacterial regulatory proteins, luxR family BI317_19195 PF00127 Copper binding proteins, plastocyanin/azurin family BI317_19200 PF00155 Aminotransferase class I and II BI317_19210 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BI317_19210 PF00034 Cytochrome c BI317_19215 PF01593 Flavin containing amine oxidoreductase BI317_19230 PF00202 Aminotransferase class-III BI317_19235 PF00027 Cyclic nucleotide-binding domain BI317_19235 PF00520 Ion transport protein BI317_19265 PF01569 PAP2 superfamily BI317_19275 PF01062 Bestrophin, RFP-TM, chloride channel BI317_19285 PF08245 Mur ligase middle domain BI317_19285 PF02875 Mur ligase family, glutamate ligase domain BI317_19285 PF01225 Mur ligase family, catalytic domain BI317_19295 PF00365 Phosphofructokinase BI317_19310 PF03030 Inorganic H+ pyrophosphatase BI317_19320 PF00719 Inorganic pyrophosphatase BI317_19330 PF07715 TonB-dependent Receptor Plug Domain BI317_19330 PF00593 TonB dependent receptor BI317_19335 PF12833 Helix-turn-helix domain BI317_19340 PF00486 Transcriptional regulatory protein, C terminal BI317_19340 PF18500 CadC C-terminal domain 1 BI317_19345 PF13667 ThiC-associated domain BI317_19345 PF01964 Radical SAM ThiC family BI317_19355 PF00326 Prolyl oligopeptidase family BI317_19355 PF07676 WD40-like Beta Propeller Repeat BI317_19360 PF02203 Tar ligand binding domain homologue BI317_19360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI317_19360 PF00672 HAMP domain BI317_19370 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BI317_19370 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BI317_19375 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BI317_19375 PF00205 Thiamine pyrophosphate enzyme, central domain BI317_19375 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BI317_19385 PF00291 Pyridoxal-phosphate dependent enzyme BI317_19390 PF00682 HMGL-like BI317_19390 PF08502 LeuA allosteric (dimerisation) domain BI317_19395 PF00180 Isocitrate/isopropylmalate dehydrogenase BI317_19400 PF08241 Methyltransferase domain BI317_19405 PF00694 Aconitase C-terminal domain BI317_19410 PF00330 Aconitase family (aconitate hydratase) BI317_19415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI317_19420 PF00990 Diguanylate cyclase, GGDEF domain BI317_19420 PF17151 Periplasmic sensor domain BI317_19435 PF02321 Outer membrane efflux protein BI317_19445 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BI317_19450 PF03279 Bacterial lipid A biosynthesis acyltransferase BI317_19475 PF00390 Malic enzyme, N-terminal domain BI317_19475 PF01515 Phosphate acetyl/butaryl transferase BI317_19475 PF03949 Malic enzyme, NAD binding domain BI317_19480 PF00375 Sodium:dicarboxylate symporter family BI317_19490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_19490 PF00512 His Kinase A (phospho-acceptor) domain BI317_19500 PF00593 TonB dependent receptor BI317_19500 PF07715 TonB-dependent Receptor Plug Domain BI317_19505 PF00196 Bacterial regulatory proteins, luxR family BI317_19505 PF00072 Response regulator receiver domain BI317_19515 PF08521 Two-component sensor kinase N-terminal BI317_19515 PF00512 His Kinase A (phospho-acceptor) domain BI317_19515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_19520 PF00486 Transcriptional regulatory protein, C terminal BI317_19520 PF00072 Response regulator receiver domain BI317_19530 PF03600 Citrate transporter BI317_19535 PF00106 short chain dehydrogenase BI317_19540 PF00356 Bacterial regulatory proteins, lacI family BI317_19555 PF00128 Alpha amylase, catalytic domain BI317_19585 PF03193 RsgA GTPase BI317_19595 PF05598 Transposase domain (DUF772) BI317_19595 PF01609 Transposase DDE domain BI317_19615 PF03412 Peptidase C39 family BI317_19615 PF00005 ABC transporter BI317_19615 PF00664 ABC transporter transmembrane region BI317_19635 PF13683 Integrase core domain BI317_19635 PF13276 HTH-like domain BI317_19640 PF01527 Transposase BI317_19660 PF13340 Putative transposase of IS4/5 family (DUF4096) BI317_19675 PF07715 TonB-dependent Receptor Plug Domain BI317_19675 PF00593 TonB dependent receptor BI317_19680 PF01522 Polysaccharide deacetylase BI317_19685 PF00462 Glutaredoxin BI317_19700 PF01979 Amidohydrolase family BI317_19705 PF01979 Amidohydrolase family BI317_19735 PF02645 Uncharacterised protein, DegV family COG1307 BI317_19740 PF02645 Uncharacterised protein, DegV family COG1307 BI317_19755 PF13340 Putative transposase of IS4/5 family (DUF4096) BI317_19765 PF00892 EamA-like transporter family BI317_19770 PF02567 Phenazine biosynthesis-like protein BI317_19775 PF00392 Bacterial regulatory proteins, gntR family BI317_19775 PF00155 Aminotransferase class I and II BI317_19780 PF00756 Putative esterase BI317_19790 PF08240 Alcohol dehydrogenase GroES-like domain BI317_19790 PF00107 Zinc-binding dehydrogenase BI317_19795 PF02583 Metal-sensitive transcriptional repressor BI317_19815 PF00072 Response regulator receiver domain BI317_19815 PF00486 Transcriptional regulatory protein, C terminal BI317_19820 PF00512 His Kinase A (phospho-acceptor) domain BI317_19820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_19820 PF00672 HAMP domain BI317_19825 PF04107 Glutamate-cysteine ligase family 2(GCS2) BI317_19830 PF01926 50S ribosome-binding GTPase BI317_19835 PF00034 Cytochrome c BI317_19845 PF01323 DSBA-like thioredoxin domain BI317_19855 PF02028 BCCT, betaine/carnitine/choline family transporter BI317_19860 PF00171 Aldehyde dehydrogenase family BI317_19865 PF05199 GMC oxidoreductase BI317_19865 PF00732 GMC oxidoreductase BI317_19885 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain BI317_19885 PF01464 Transglycosylase SLT domain BI317_19895 PF01966 HD domain BI317_19895 PF01743 Poly A polymerase head domain BI317_19895 PF12627 Probable RNA and SrmB- binding site of polymerase A BI317_19905 PF01979 Amidohydrolase family BI317_19910 PF01380 SIS domain BI317_19915 PF00356 Bacterial regulatory proteins, lacI family BI317_19920 PF07690 Major Facilitator Superfamily BI317_19940 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BI317_19940 PF02837 Glycosyl hydrolases family 2, sugar binding domain BI317_19940 PF00703 Glycosyl hydrolases family 2 BI317_19940 PF16355 Domain of unknown function (DUF4982) BI317_19940 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 BI317_19965 PF03934 Type II secretion system (T2SS), protein K BI317_19970 PF11612 Type II secretion system (T2SS), protein J BI317_19970 PF07963 Prokaryotic N-terminal methylation motif BI317_19975 PF07963 Prokaryotic N-terminal methylation motif BI317_19975 PF02501 Type II secretion system (T2SS), protein I BI317_19980 PF12019 Type II transport protein GspH BI317_19980 PF07963 Prokaryotic N-terminal methylation motif BI317_19985 PF08334 Type II secretion system (T2SS), protein G BI317_19985 PF07963 Prokaryotic N-terminal methylation motif BI317_19990 PF00482 Type II secretion system (T2SS), protein F BI317_19995 PF00437 Type II/IV secretion system protein BI317_20000 PF00263 Bacterial type II and III secretion system protein BI317_20000 PF03958 Bacterial type II/III secretion system short domain BI317_20045 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BI317_20050 PF00512 His Kinase A (phospho-acceptor) domain BI317_20050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_20055 PF00072 Response regulator receiver domain BI317_20060 PF01590 GAF domain BI317_20060 PF00360 Phytochrome region BI317_20060 PF08446 PAS fold BI317_20060 PF00512 His Kinase A (phospho-acceptor) domain BI317_20060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_20065 PF04972 BON domain BI317_20070 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BI317_20070 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BI317_20075 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BI317_20075 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BI317_20110 PF01467 Cytidylyltransferase-like BI317_20110 PF00293 NUDIX domain BI317_20125 PF03572 Peptidase family S41 BI317_20125 PF11818 C-terminal domain of tail specific protease (DUF3340) BI317_20125 PF17804 Tail specific protease N-terminal domain BI317_20125 PF00595 PDZ domain BI317_20130 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BI317_20130 PF04055 Radical SAM superfamily BI317_20135 PF03099 Biotin/lipoate A/B protein ligase family BI317_20140 PF04359 Protein of unknown function (DUF493) BI317_20150 PF07943 Penicillin-binding protein 5, C-terminal domain BI317_20150 PF00768 D-alanyl-D-alanine carboxypeptidase BI317_20155 PF03330 Lytic transglycolase BI317_20155 PF05036 Sporulation related domain BI317_20160 PF13406 Transglycosylase SLT domain BI317_20170 PF01098 Cell cycle protein BI317_20175 PF03717 Penicillin-binding Protein dimerisation domain BI317_20175 PF00905 Penicillin binding protein transpeptidase domain BI317_20180 PF04093 rod shape-determining protein MreD BI317_20185 PF04085 rod shape-determining protein MreC BI317_20195 PF00294 pfkB family carbohydrate kinase BI317_20200 PF01590 GAF domain BI317_20200 PF02954 Bacterial regulatory protein, Fis family BI317_20200 PF00158 Sigma-54 interaction domain BI317_20215 PF00107 Zinc-binding dehydrogenase BI317_20215 PF08240 Alcohol dehydrogenase GroES-like domain BI317_20230 PF00497 Bacterial extracellular solute-binding proteins, family 3 BI317_20235 PF13360 PQQ-like domain BI317_20255 PF11838 ERAP1-like C-terminal domain BI317_20255 PF01433 Peptidase family M1 domain BI317_20260 PF03707 Bacterial signalling protein N terminal repeat BI317_20260 PF00990 Diguanylate cyclase, GGDEF domain BI317_20260 PF00563 EAL domain BI317_20265 PF01209 ubiE/COQ5 methyltransferase family BI317_20275 PF13533 Biotin-lipoyl like BI317_20285 PF13673 Acetyltransferase (GNAT) domain BI317_20295 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BI317_20295 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BI317_20300 PF00004 ATPase family associated with various cellular activities (AAA) BI317_20300 PF10431 C-terminal, D2-small domain, of ClpB protein BI317_20300 PF07724 AAA domain (Cdc48 subfamily) BI317_20305 PF00227 Proteasome subunit BI317_20310 PF00589 Phage integrase family BI317_20310 PF02899 Phage integrase, N-terminal SAM-like domain BI317_20320 PF01678 Diaminopimelate epimerase BI317_20330 PF04304 Protein of unknown function (DUF454) BI317_20335 PF00326 Prolyl oligopeptidase family BI317_20335 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BI317_20340 PF00155 Aminotransferase class I and II BI317_20345 PF01609 Transposase DDE domain BI317_20345 PF05598 Transposase domain (DUF772) BI317_20365 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BI317_20365 PF00326 Prolyl oligopeptidase family BI317_20390 PF03900 Porphobilinogen deaminase, C-terminal domain BI317_20390 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BI317_20395 PF04397 LytTr DNA-binding domain BI317_20395 PF00072 Response regulator receiver domain BI317_20400 PF07694 5TMR of 5TMR-LYT BI317_20400 PF06580 Histidine kinase BI317_20410 PF13632 Glycosyl transferase family group 2 BI317_20435 PF00990 Diguanylate cyclase, GGDEF domain BI317_20435 PF08448 PAS fold BI317_20440 PF01740 STAS domain BI317_20440 PF00916 Sulfate permease family BI317_20445 PF00553 Cellulose binding domain BI317_20445 PF00150 Cellulase (glycosyl hydrolase family 5) BI317_20460 PF03707 Bacterial signalling protein N terminal repeat BI317_20460 PF00990 Diguanylate cyclase, GGDEF domain BI317_20460 PF00563 EAL domain BI317_20470 PF00544 Pectate lyase BI317_20490 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BI317_20490 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BI317_20510 PF01204 Trehalase BI317_20515 PF04616 Glycosyl hydrolases family 43 BI317_20525 PF01544 CorA-like Mg2+ transporter protein BI317_20530 PF00324 Amino acid permease BI317_20545 PF00497 Bacterial extracellular solute-binding proteins, family 3 BI317_20550 PF00892 EamA-like transporter family BI317_20575 PF05230 MASE2 domain BI317_20575 PF00990 Diguanylate cyclase, GGDEF domain BI317_20580 PF07759 Protein of unknown function (DUF1615) BI317_20620 PF13409 Glutathione S-transferase, N-terminal domain BI317_20655 PF07715 TonB-dependent Receptor Plug Domain BI317_20655 PF00593 TonB dependent receptor BI317_20750 PF13361 UvrD-like helicase C-terminal domain BI317_20750 PF00580 UvrD/REP helicase N-terminal domain BI317_20790 PF03852 DNA mismatch endonuclease Vsr BI317_20795 PF00145 C-5 cytosine-specific DNA methylase BI317_20805 PF17831 Pyruvate dehydrogenase E1 component middle domain BI317_20805 PF00456 Transketolase, thiamine diphosphate binding domain BI317_20845 PF07729 FCD domain BI317_20845 PF00392 Bacterial regulatory proteins, gntR family BI317_20855 PF00550 Phosphopantetheine attachment site BI317_20855 PF08659 KR domain BI317_20855 PF02801 Beta-ketoacyl synthase, C-terminal domain BI317_20855 PF00109 Beta-ketoacyl synthase, N-terminal domain BI317_20855 PF00698 Acyl transferase domain BI317_20855 PF16197 Ketoacyl-synthetase C-terminal extension BI317_20860 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase BI317_20865 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG BI317_20875 PF01039 Carboxyl transferase domain BI317_20880 PF06857 Malonate decarboxylase delta subunit (MdcD) BI317_20885 PF16957 Malonate decarboxylase, alpha subunit, transporter BI317_20905 PF04264 YceI-like domain BI317_20910 PF00881 Nitroreductase family BI317_20930 PF02592 Putative vitamin uptake transporter BI317_20935 PF08335 GlnD PII-uridylyltransferase BI317_20935 PF03710 Glutamate-ammonia ligase adenylyltransferase BI317_20960 PF00593 TonB dependent receptor BI317_20960 PF07660 Secretin and TonB N terminus short domain BI317_20960 PF07715 TonB-dependent Receptor Plug Domain BI317_20965 PF04773 FecR protein BI317_20965 PF16220 Domain of unknown function (DUF4880) BI317_20985 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BI317_20985 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BI317_20990 PF13340 Putative transposase of IS4/5 family (DUF4096) BI317_21000 PF00793 DAHP synthetase I family BI317_21005 PF07804 HipA-like C-terminal domain BI317_21020 PF13340 Putative transposase of IS4/5 family (DUF4096) BI317_21040 PF01738 Dienelactone hydrolase family BI317_21045 PF00118 TCP-1/cpn60 chaperonin family BI317_21050 PF00166 Chaperonin 10 Kd subunit BI317_21055 PF04231 Endonuclease I BI317_21060 PF03091 CutA1 divalent ion tolerance protein BI317_21065 PF02683 Cytochrome C biogenesis protein transmembrane region BI317_21065 PF11412 Disulphide bond corrector protein DsbC BI317_21070 PF01220 Dehydroquinase class II BI317_21075 PF00364 Biotin-requiring enzyme BI317_21085 PF00289 Biotin carboxylase, N-terminal domain BI317_21085 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BI317_21085 PF02785 Biotin carboxylase C-terminal domain BI317_21110 PF01381 Helix-turn-helix BI317_21125 PF02954 Bacterial regulatory protein, Fis family BI317_21130 PF00818 Ice nucleation protein repeat BI317_21130 PF00818 Ice nucleation protein repeat BI317_21135 PF05598 Transposase domain (DUF772) BI317_21135 PF01609 Transposase DDE domain BI317_21160 PF02142 MGS-like domain BI317_21160 PF01808 AICARFT/IMPCHase bienzyme BI317_21165 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BI317_21165 PF02844 Phosphoribosylglycinamide synthetase, N domain BI317_21165 PF02843 Phosphoribosylglycinamide synthetase, C domain BI317_21170 PF12805 FUSC-like inner membrane protein yccS BI317_21175 PF07690 Major Facilitator Superfamily BI317_21195 PF03186 CobD/Cbib protein BI317_21195 PF17113 Regulatory signalling modulator protein AmpE BI317_21200 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain BI317_21200 PF00293 NUDIX domain BI317_21200 PF09297 NADH pyrophosphatase zinc ribbon domain BI317_21210 PF01521 Iron-sulphur cluster biosynthesis BI317_21230 PF00486 Transcriptional regulatory protein, C terminal BI317_21230 PF00072 Response regulator receiver domain BI317_21235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_21235 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BI317_21235 PF00072 Response regulator receiver domain BI317_21235 PF01627 Hpt domain BI317_21235 PF00672 HAMP domain BI317_21235 PF00512 His Kinase A (phospho-acceptor) domain BI317_21240 PF00210 Ferritin-like domain BI317_21250 PF00293 NUDIX domain BI317_21265 PF00380 Ribosomal protein S9/S16 BI317_21270 PF00572 Ribosomal protein L13 BI317_21275 PF03232 Ubiquinone biosynthesis protein COQ7 BI317_21280 PF00893 Small Multidrug Resistance protein BI317_21285 PF02675 S-adenosylmethionine decarboxylase BI317_21290 PF00325 Bacterial regulatory proteins, crp family BI317_21290 PF00027 Cyclic nucleotide-binding domain BI317_21300 PF00218 Indole-3-glycerol phosphate synthase BI317_21305 PF02885 Glycosyl transferase family, helical bundle domain BI317_21305 PF00591 Glycosyl transferase family, a/b domain BI317_21315 PF00117 Glutamine amidotransferase class-I BI317_21320 PF02203 Tar ligand binding domain homologue BI317_21320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI317_21320 PF00672 HAMP domain BI317_21330 PF13340 Putative transposase of IS4/5 family (DUF4096) BI317_21345 PF07804 HipA-like C-terminal domain BI317_21350 PF00793 DAHP synthetase I family BI317_21360 PF13340 Putative transposase of IS4/5 family (DUF4096) BI317_21375 PF01464 Transglycosylase SLT domain BI317_21400 PF02874 ATP synthase alpha/beta family, beta-barrel domain BI317_21400 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BI317_21400 PF18269 T3SS EscN ATPase C-terminal domain BI317_21415 PF01514 Secretory protein of YscJ/FliF family BI317_21430 PF01312 FlhB HrpN YscU SpaS Family BI317_21435 PF00771 FHIPEP family BI317_21450 PF00813 FliP family BI317_21455 PF01313 Bacterial export proteins, family 3 BI317_21500 PF01527 Transposase BI317_21505 PF13683 Integrase core domain BI317_21505 PF13276 HTH-like domain BI317_21515 PF00561 alpha/beta hydrolase fold BI317_21535 PF05819 NolX protein BI317_21550 PF00425 chorismate binding enzyme BI317_21550 PF04715 Anthranilate synthase component I, N terminal region BI317_21555 PF00781 Diacylglycerol kinase catalytic domain BI317_21565 PF00834 Ribulose-phosphate 3 epimerase family BI317_21575 PF05099 Tellurite resistance protein TerB BI317_21575 PF00226 DnaJ domain BI317_21580 PF01259 SAICAR synthetase BI317_21625 PF02868 Thermolysin metallopeptidase, alpha-helical domain BI317_21625 PF01483 Proprotein convertase P-domain BI317_21625 PF07504 Fungalysin/Thermolysin Propeptide Motif BI317_21625 PF01447 Thermolysin metallopeptidase, catalytic domain BI317_21640 PF13244 Domain of unknown function (DUF4040) BI317_21640 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter BI317_21640 PF00361 Proton-conducting membrane transporter BI317_21640 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BI317_21645 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BI317_21650 PF00361 Proton-conducting membrane transporter BI317_21660 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) BI317_21665 PF03334 Na+/H+ antiporter subunit BI317_21680 PF04209 homogentisate 1,2-dioxygenase BI317_21685 PF04480 Protein of unknown function (DUF559) BI317_21690 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BI317_21695 PF01047 MarR family BI317_21705 PF00854 POT family BI317_21710 PF03301 Tryptophan 2,3-dioxygenase BI317_21720 PF00676 Dehydrogenase E1 component BI317_21725 PF02779 Transketolase, pyrimidine binding domain BI317_21725 PF02780 Transketolase, C-terminal domain BI317_21735 PF00364 Biotin-requiring enzyme BI317_21735 PF02817 e3 binding domain BI317_21735 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BI317_21745 PF00271 Helicase conserved C-terminal domain BI317_21745 PF00270 DEAD/DEAH box helicase BI317_21755 PF00873 AcrB/AcrD/AcrF family BI317_21765 PF00440 Bacterial regulatory proteins, tetR family BI317_21770 PF02321 Outer membrane efflux protein BI317_21775 PF06903 VirK protein BI317_21780 PF06903 VirK protein BI317_21800 PF13460 NAD(P)H-binding BI317_21805 PF00128 Alpha amylase, catalytic domain BI317_21805 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BI317_21815 PF00128 Alpha amylase, catalytic domain BI317_21820 PF02446 4-alpha-glucanotransferase BI317_21825 PF00128 Alpha amylase, catalytic domain BI317_21825 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BI317_21825 PF11941 Domain of unknown function (DUF3459) BI317_21830 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BI317_21830 PF00128 Alpha amylase, catalytic domain BI317_21830 PF02806 Alpha amylase, C-terminal all-beta domain BI317_21835 PF08323 Starch synthase catalytic domain BI317_21835 PF00534 Glycosyl transferases group 1 BI317_21840 PF08448 PAS fold BI317_21840 PF00990 Diguanylate cyclase, GGDEF domain BI317_21850 PF05661 Protein of unknown function (DUF808) BI317_21855 PF03109 ABC1 family BI317_21860 PF00884 Sulfatase BI317_21870 PF00924 Mechanosensitive ion channel BI317_21870 PF12795 Mechanosensitive ion channel porin domain BI317_21870 PF12794 Mechanosensitive ion channel inner membrane domain 1 BI317_21890 PF01431 Peptidase family M13 BI317_21890 PF05649 Peptidase family M13 BI317_21895 PF13340 Putative transposase of IS4/5 family (DUF4096) BI317_21905 PF00589 Phage integrase family BI317_21905 PF13356 Arm DNA-binding domain BI317_21925 PF01040 UbiA prenyltransferase family BI317_21935 PF04055 Radical SAM superfamily BI317_21935 PF06968 Biotin and Thiamin Synthesis associated domain BI317_21940 PF00155 Aminotransferase class I and II BI317_21945 PF12697 Alpha/beta hydrolase family BI317_21955 PF13649 Methyltransferase domain BI317_21990 PF01134 Glucose inhibited division protein A BI317_21990 PF13932 GidA associated domain BI317_21995 PF10677 Protein of unknown function (DUF2490) BI317_22000 PF07859 alpha/beta hydrolase fold BI317_22010 PF01614 Bacterial transcriptional regulator BI317_22010 PF09339 IclR helix-turn-helix domain BI317_22020 PF02627 Carboxymuconolactone decarboxylase family BI317_22025 PF12146 Serine aminopeptidase, S33 BI317_22030 PF10397 Adenylosuccinate lyase C-terminus BI317_22030 PF00206 Lyase BI317_22040 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal BI317_22040 PF00775 Dioxygenase BI317_22045 PF02803 Thiolase, C-terminal domain BI317_22045 PF00108 Thiolase, N-terminal domain BI317_22050 PF01144 Coenzyme A transferase BI317_22055 PF01144 Coenzyme A transferase BI317_22060 PF00355 Rieske [2Fe-2S] domain BI317_22075 PF08220 DeoR-like helix-turn-helix domain BI317_22075 PF00455 DeoR C terminal sensor domain BI317_22080 PF01266 FAD dependent oxidoreductase BI317_22080 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BI317_22085 PF00230 Major intrinsic protein BI317_22090 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BI317_22090 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BI317_22100 PF01494 FAD binding domain BI317_22115 PF00171 Aldehyde dehydrogenase family BI317_22135 PF11871 Domain of unknown function (DUF3391) BI317_22135 PF01966 HD domain BI317_22140 PF07690 Major Facilitator Superfamily BI317_22145 PF00132 Bacterial transferase hexapeptide (six repeats) BI317_22150 PF03692 Putative zinc- or iron-chelating domain BI317_22155 PF00920 Dehydratase family BI317_22185 PF01527 Transposase BI317_22190 PF13276 HTH-like domain BI317_22190 PF13683 Integrase core domain BI317_22205 PF13333 Integrase core domain BI317_22205 PF13276 HTH-like domain BI317_22205 PF00665 Integrase core domain BI317_22210 PF01527 Transposase BI317_22255 PF01527 Transposase BI317_22260 PF13683 Integrase core domain BI317_22260 PF13276 HTH-like domain BI317_22270 PF01638 HxlR-like helix-turn-helix BI317_22275 PF05368 NmrA-like family BI317_22290 PF01717 Cobalamin-independent synthase, Catalytic domain BI317_22290 PF08267 Cobalamin-independent synthase, N-terminal domain BI317_22300 PF03358 NADPH-dependent FMN reductase BI317_22305 PF03466 LysR substrate binding domain BI317_22305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI317_22310 PF02677 Epoxyqueuosine reductase QueH BI317_22315 PF02219 Methylenetetrahydrofolate reductase BI317_22330 PF00933 Glycosyl hydrolase family 3 N terminal domain BI317_22335 PF00551 Formyl transferase BI317_22345 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BI317_22345 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BI317_22350 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BI317_22355 PF02146 Sir2 family BI317_22390 PF07690 Major Facilitator Superfamily BI317_22395 PF03466 LysR substrate binding domain BI317_22395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI317_22410 PF01026 TatD related DNase BI317_22415 PF03466 LysR substrate binding domain BI317_22415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI317_22420 PF00355 Rieske [2Fe-2S] domain BI317_22425 PF00111 2Fe-2S iron-sulfur cluster binding domain BI317_22430 PF00860 Permease family BI317_22440 PF01156 Inosine-uridine preferring nucleoside hydrolase BI317_22445 PF01425 Amidase BI317_22470 PF13340 Putative transposase of IS4/5 family (DUF4096) BI317_22490 PF00005 ABC transporter BI317_22490 PF00664 ABC transporter transmembrane region BI317_22490 PF03412 Peptidase C39 family BI317_22520 PF05598 Transposase domain (DUF772) BI317_22520 PF01609 Transposase DDE domain BI317_22525 PF05598 Transposase domain (DUF772) BI317_22525 PF01609 Transposase DDE domain BI317_22535 PF13276 HTH-like domain BI317_22535 PF13683 Integrase core domain BI317_22540 PF01527 Transposase BI317_22550 PF07996 Type IV secretion system proteins BI317_22560 PF04610 TrbL/VirB6 plasmid conjugal transfer protein BI317_22565 PF05598 Transposase domain (DUF772) BI317_22565 PF01609 Transposase DDE domain BI317_22600 PF13683 Integrase core domain BI317_22600 PF13276 HTH-like domain BI317_22605 PF01527 Transposase BI317_22690 PF01555 DNA methylase BI317_22705 PF00717 Peptidase S24-like BI317_22715 PF01527 Transposase BI317_22720 PF13683 Integrase core domain BI317_22720 PF13276 HTH-like domain BI317_22755 PF13087 AAA domain BI317_22755 PF13091 PLD-like domain BI317_22760 PF05598 Transposase domain (DUF772) BI317_22760 PF01609 Transposase DDE domain BI317_22770 PF01609 Transposase DDE domain BI317_22770 PF05598 Transposase domain (DUF772) BI317_22785 PF01850 PIN domain BI317_22790 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BI317_22795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI317_22795 PF03466 LysR substrate binding domain BI317_22800 PF00440 Bacterial regulatory proteins, tetR family BI317_22805 PF07690 Major Facilitator Superfamily BI317_22815 PF12833 Helix-turn-helix domain BI317_22815 PF01965 DJ-1/PfpI family BI317_22835 PF01740 STAS domain BI317_22835 PF00916 Sulfate permease family BI317_22865 PF01042 Endoribonuclease L-PSP BI317_22870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI317_22870 PF03466 LysR substrate binding domain BI317_22880 PF00005 ABC transporter BI317_22895 PF07715 TonB-dependent Receptor Plug Domain BI317_22895 PF00593 TonB dependent receptor BI317_22920 PF07690 Major Facilitator Superfamily BI317_22925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI317_22925 PF03466 LysR substrate binding domain BI317_22945 PF00107 Zinc-binding dehydrogenase BI317_22945 PF08240 Alcohol dehydrogenase GroES-like domain BI317_22945 PF13823 Alcohol dehydrogenase GroES-associated BI317_22960 PF00664 ABC transporter transmembrane region BI317_22960 PF00005 ABC transporter BI317_22970 PF03275 UDP-galactopyranose mutase BI317_22980 PF16363 GDP-mannose 4,6 dehydratase BI317_22990 PF05598 Transposase domain (DUF772) BI317_22990 PF01609 Transposase DDE domain BI317_23015 PF00072 Response regulator receiver domain BI317_23015 PF02954 Bacterial regulatory protein, Fis family BI317_23015 PF00158 Sigma-54 interaction domain BI317_23030 PF01739 CheR methyltransferase, SAM binding domain BI317_23030 PF08448 PAS fold BI317_23030 PF03705 CheR methyltransferase, all-alpha domain BI317_23030 PF01339 CheB methylesterase BI317_23045 PF05067 Manganese containing catalase BI317_23050 PF05974 Domain of unknown function (DUF892) BI317_23070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_23070 PF02743 Cache domain BI317_23070 PF06580 Histidine kinase BI317_23070 PF00672 HAMP domain BI317_23075 PF00072 Response regulator receiver domain BI317_23075 PF04397 LytTr DNA-binding domain BI317_23085 PF13520 Amino acid permease BI317_23110 PF01431 Peptidase family M13 BI317_23110 PF05649 Peptidase family M13 BI317_23120 PF00248 Aldo/keto reductase family BI317_23125 PF03358 NADPH-dependent FMN reductase BI317_23130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI317_23130 PF03466 LysR substrate binding domain BI317_23140 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BI317_23155 PF03167 Uracil DNA glycosylase superfamily BI317_23160 PF02469 Fasciclin domain BI317_23175 PF00999 Sodium/hydrogen exchanger family BI317_23180 PF00005 ABC transporter BI317_23185 PF01061 ABC-2 type transporter BI317_23200 PF00145 C-5 cytosine-specific DNA methylase BI317_23225 PF00561 alpha/beta hydrolase fold BI317_23230 PF03466 LysR substrate binding domain BI317_23230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI317_23235 PF07690 Major Facilitator Superfamily BI317_23240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI317_23240 PF03466 LysR substrate binding domain BI317_23245 PF01546 Peptidase family M20/M25/M40 BI317_23245 PF07687 Peptidase dimerisation domain BI317_23250 PF00266 Aminotransferase class-V BI317_23265 PF09349 OHCU decarboxylase BI317_23265 PF01014 Uricase BI317_23270 PF13454 FAD-NAD(P)-binding BI317_23275 PF00576 HIUase/Transthyretin family BI317_23280 PF07308 Protein of unknown function (DUF1456) BI317_23290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI317_23290 PF00672 HAMP domain BI317_23290 PF02203 Tar ligand binding domain homologue BI317_23295 PF08482 ATP-dependent helicase C-terminal BI317_23295 PF04408 Helicase associated domain (HA2) BI317_23295 PF00270 DEAD/DEAH box helicase BI317_23295 PF00271 Helicase conserved C-terminal domain BI317_23305 PF00593 TonB dependent receptor BI317_23310 PF00849 RNA pseudouridylate synthase BI317_23325 PF16884 N-terminal domain of oxidoreductase BI317_23325 PF00107 Zinc-binding dehydrogenase BI317_23330 PF00248 Aldo/keto reductase family BI317_23350 PF12697 Alpha/beta hydrolase family BI317_23355 PF02566 OsmC-like protein BI317_23360 PF01047 MarR family BI317_23375 PF03969 AFG1-like ATPase BI317_23400 PF07683 Cobalamin synthesis protein cobW C-terminal domain BI317_23400 PF02492 CobW/HypB/UreG, nucleotide-binding domain BI317_23415 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BI317_23455 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BI317_23455 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BI317_23455 PF02770 Acyl-CoA dehydrogenase, middle domain BI317_23460 PF01039 Carboxyl transferase domain BI317_23465 PF00364 Biotin-requiring enzyme BI317_23465 PF00289 Biotin carboxylase, N-terminal domain BI317_23465 PF02785 Biotin carboxylase C-terminal domain BI317_23465 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BI317_23470 PF00326 Prolyl oligopeptidase family BI317_23490 PF00563 EAL domain BI317_23490 PF00990 Diguanylate cyclase, GGDEF domain BI317_23490 PF13426 PAS domain BI317_23495 PF00463 Isocitrate lyase family BI317_23500 PF01274 Malate synthase BI317_23505 PF03466 LysR substrate binding domain BI317_23505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI317_23515 PF12706 Beta-lactamase superfamily domain BI317_23525 PF01432 Peptidase family M3 BI317_23530 PF01112 Asparaginase BI317_23540 PF00472 RF-1 domain BI317_23550 PF00849 RNA pseudouridylate synthase BI317_23555 PF03109 ABC1 family BI317_23565 PF01820 D-ala D-ala ligase N-terminus BI317_23565 PF07478 D-ala D-ala ligase C-terminus BI317_23575 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family BI317_23595 PF00501 AMP-binding enzyme BI317_23600 PF03692 Putative zinc- or iron-chelating domain BI317_23605 PF00561 alpha/beta hydrolase fold BI317_23610 PF02661 Fic/DOC family BI317_23610 PF13784 Fic/DOC family N-terminal BI317_23615 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BI317_23615 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BI317_23630 PF00588 SpoU rRNA Methylase family BI317_23635 PF07690 Major Facilitator Superfamily BI317_23650 PF00158 Sigma-54 interaction domain BI317_23650 PF00072 Response regulator receiver domain BI317_23650 PF02954 Bacterial regulatory protein, Fis family BI317_23655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_23655 PF00512 His Kinase A (phospho-acceptor) domain BI317_23660 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BI317_23660 PF00205 Thiamine pyrophosphate enzyme, central domain BI317_23660 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BI317_23670 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BI317_23670 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BI317_23675 PF02556 Preprotein translocase subunit SecB BI317_23680 PF00581 Rhodanese-like domain BI317_23720 PF02803 Thiolase, C-terminal domain BI317_23720 PF00108 Thiolase, N-terminal domain BI317_23730 PF00080 Copper/zinc superoxide dismutase (SODC) BI317_23735 PF00080 Copper/zinc superoxide dismutase (SODC) BI317_23740 PF02954 Bacterial regulatory protein, Fis family BI317_23740 PF00072 Response regulator receiver domain BI317_23740 PF00158 Sigma-54 interaction domain BI317_23745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI317_23745 PF00512 His Kinase A (phospho-acceptor) domain BI317_23745 PF00989 PAS fold BI317_23750 PF00909 Ammonium Transporter Family BI317_23755 PF00543 Nitrogen regulatory protein P-II BI317_23760 PF00120 Glutamine synthetase, catalytic domain BI317_23760 PF03951 Glutamine synthetase, beta-Grasp domain BI317_23765 PF02673 Bacitracin resistance protein BacA BI317_23775 PF01161 Phosphatidylethanolamine-binding protein BI317_23800 PF03061 Thioesterase superfamily BI317_23810 PF13091 PLD-like domain BI317_23825 PF01883 Iron-sulfur cluster assembly protein BI317_23825 PF10609 NUBPL iron-transfer P-loop NTPase BI317_23850 PF01381 Helix-turn-helix BI317_23855 PF13657 HipA N-terminal domain BI317_23855 PF07804 HipA-like C-terminal domain BI317_23865 PF03781 Sulfatase-modifying factor enzyme 1 BI317_23865 PF12867 DinB superfamily BI317_23875 PF00528 Binding-protein-dependent transport system inner membrane component BI317_23880 PF00005 ABC transporter BI317_23880 PF00571 CBS domain BI317_23895 PF00005 ABC transporter BI317_23900 PF01734 Patatin-like phospholipase BI317_23905 PF07715 TonB-dependent Receptor Plug Domain BI317_23905 PF07660 Secretin and TonB N terminus short domain BI317_23905 PF00593 TonB dependent receptor BI317_23910 PF01037 Lrp/AsnC ligand binding domain BI317_23915 PF00351 Biopterin-dependent aromatic amino acid hydroxylase BI317_23935 PF00657 GDSL-like Lipase/Acylhydrolase BI317_23950 PF04962 KduI/IolB family BI317_23960 PF00356 Bacterial regulatory proteins, lacI family BI317_23965 PF04616 Glycosyl hydrolases family 43 BI317_23965 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BI317_23970 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BI317_23980 PF03480 Bacterial extracellular solute-binding protein, family 7 BI317_23995 PF00135 Carboxylesterase family BI317_24000 PF13472 GDSL-like Lipase/Acylhydrolase family BI317_24005 PF00248 Aldo/keto reductase family BI317_24030 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BI317_24030 PF02806 Alpha amylase, C-terminal all-beta domain BI317_24030 PF00128 Alpha amylase, catalytic domain BI317_24035 PF16657 Maltogenic Amylase, C-terminal domain BI317_24035 PF00128 Alpha amylase, catalytic domain BI317_24040 PF00128 Alpha amylase, catalytic domain BI317_24040 PF11896 Domain of unknown function (DUF3416) BI317_24090 PF13683 Integrase core domain BI317_24090 PF13276 HTH-like domain BI317_24095 PF01527 Transposase BI317_24100 PF05598 Transposase domain (DUF772) BI317_24100 PF01609 Transposase DDE domain BI317_24155 PF13340 Putative transposase of IS4/5 family (DUF4096) BI317_24180 PF06719 AraC-type transcriptional regulator N-terminus BI317_24180 PF12833 Helix-turn-helix domain BI317_24190 PF01381 Helix-turn-helix BI317_24195 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB BI317_24210 PF00580 UvrD/REP helicase N-terminal domain BI317_24210 PF13361 UvrD-like helicase C-terminal domain BI317_24280 PF02683 Cytochrome C biogenesis protein transmembrane region BI317_24280 PF11412 Disulphide bond corrector protein DsbC BI317_24285 PF13361 UvrD-like helicase C-terminal domain BI317_24285 PF00580 UvrD/REP helicase N-terminal domain BI317_24360 PF00717 Peptidase S24-like BI317_24365 PF13438 Domain of unknown function (DUF4113) BI317_24365 PF00817 impB/mucB/samB family BI317_24365 PF11799 impB/mucB/samB family C-terminal domain BI317_24365 PF11798 IMS family HHH motif BI317_24400 PF01526 Tn3 transposase DDE domain BI317_24400 PF13700 Domain of unknown function (DUF4158) BI317_24410 PF09278 MerR, DNA binding BI317_24410 PF00376 MerR family regulatory protein BI317_24430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI317_24430 PF00529 HlyD membrane-fusion protein of T1SS BI317_24435 PF00873 AcrB/AcrD/AcrF family BI317_24445 PF02040 Arsenical pump membrane protein BI317_24450 PF03358 NADPH-dependent FMN reductase BI317_24455 PF03960 ArsC family BI317_24475 PF13175 AAA ATPase domain BI317_24500 PF07732 Multicopper oxidase BI317_24500 PF07731 Multicopper oxidase BI317_24500 PF00394 Multicopper oxidase BI317_24505 PF05275 Copper resistance protein B precursor (CopB) BI317_24535 PF05425 Copper resistance protein D BI317_24540 PF04945 YHS domain BI317_24555 PF00491 Arginase family BI317_24570 PF00873 AcrB/AcrD/AcrF family BI317_24700 PF06834 TraU protein BI317_24800 PF13614 AAA domain BI317_24980 PF06733 DEAD_2 BI317_24980 PF13307 Helicase C-terminal domain BI317_24990 PF01966 HD domain BI317_25000 PF00486 Transcriptional regulatory protein, C terminal BI317_25000 PF00072 Response regulator receiver domain BI317_25020 PF13098 Thioredoxin-like domain BI317_25020 PF10411 Disulfide bond isomerase protein N-terminus BI317_25045 PF10135 Rod binding protein BI317_25045 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BI317_25075 PF04381 Putative exonuclease, RdgC BI317_25080 PF00565 Staphylococcal nuclease homologue BI317_25135 PF17762 HTH domain found in ParB protein BI317_25135 PF02195 ParB-like nuclease domain BI317_25170 PF00436 Single-strand binding protein family BI317_25200 PF04851 Type III restriction enzyme, res subunit BI317_25200 PF00271 Helicase conserved C-terminal domain BI317_25330 PF09722 Protein of unknown function (DUF2384) BI317_25330 PF01936 NYN domain BI317_25375 PF02796 Helix-turn-helix domain of resolvase BI317_25375 PF00239 Resolvase, N terminal domain BI317_25420 PF01527 Transposase BI317_25430 PF07057 DNA helicase TraI BI317_25430 PF18272 single-stranded DNA binding TraI N-terminal subdomain BI317_25430 PF08751 TrwC relaxase BI317_25430 PF18340 DNA relaxase TraI 2B/2B-like domain BI317_25430 PF07057 DNA helicase TraI BI317_25430 PF18272 single-stranded DNA binding TraI N-terminal subdomain BI317_25430 PF18340 DNA relaxase TraI 2B/2B-like domain BI317_25430 PF08751 TrwC relaxase BI317_25465 PF03230 Antirestriction protein BI317_25480 PF17841 BID domain of Bartonella effector protein (Bep) BI317_25480 PF02661 Fic/DOC family BI317_25485 PF18495 Antitoxin VbhA BI317_25510 PF06067 Domain of unknown function (DUF932) BI317_25520 PF00872 Transposase, Mutator family BI317_25550 PF11740 Plasmid replication region DNA-binding N-term BI317_25585 PF01609 Transposase DDE domain BI317_25585 PF05598 Transposase domain (DUF772) BI317_25675 PF00239 Resolvase, N terminal domain BI317_25675 PF02796 Helix-turn-helix domain of resolvase BI317_25690 PF13276 HTH-like domain BI317_25690 PF13333 Integrase core domain BI317_25690 PF00665 Integrase core domain BI317_25695 PF01527 Transposase BI317_25700 PF03377 TAL effector repeat BI317_25720 PF02796 Helix-turn-helix domain of resolvase BI317_25720 PF00239 Resolvase, N terminal domain BI317_25830 PF02534 Type IV secretory system Conjugative DNA transfer BI317_25870 PF00437 Type II/IV secretion system protein BI317_25915 PF03743 Bacterial conjugation TrbI-like protein