BI317_00015 SM00382 ATPases associated with a variety of cellular activities BI317_00045 SM00342 helix_turn_helix, arabinose operon control protein BI317_00050 SM01126 BI317_00050 BI317_00105 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BI317_00105 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BI317_00105 SM00091 PAS domain BI317_00105 SM00267 diguanylate cyclase BI317_00155 SM00062 Bacterial periplasmic substrate-binding proteins BI317_00160 SM00382 ATPases associated with a variety of cellular activities BI317_00195 SM00342 helix_turn_helix, arabinose operon control protein BI317_00255 SM00014 Acid phosphatase homologues BI317_00285 SM00382 ATPases associated with a variety of cellular activities BI317_00285 SM00760 Bacterial dnaA protein helix-turn-helix domain BI317_00290 SM00480 DNA polymerase III beta subunit BI317_00300 SM00387 Histidine kinase-like ATPases BI317_00300 SM00433 TopoisomeraseII BI317_00315 SM00028 Tetratricopeptide repeats BI317_00355 SM00155 Phospholipase D. Active site motifs. BI317_00360 SM00729 Elongator protein 3, MiaB family, Radical SAM BI317_00390 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BI317_00390 SM00245 tail specific protease BI317_00440 SM00829 Enoylreductase BI317_00500 SM01068 Putative carbohydrate binding domain BI317_00525 SM00822 BI317_00525 BI317_00610 SM00487 DEAD-like helicases superfamily BI317_00610 SM00490 helicase superfamily c-terminal domain BI317_00670 SM00822 BI317_00670 BI317_00930 SM00829 Enoylreductase BI317_00945 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen BI317_00990 SM00421 helix_turn_helix, Lux Regulon BI317_00990 SM00448 cheY-homologous receiver domain BI317_01005 SM00862 Transcriptional regulatory protein, C terminal BI317_01065 SM01126 BI317_01065 BI317_01095 SM00530 Helix-turn-helix XRE-family like proteins BI317_01115 SM00369 Leucine-rich repeats, typical (most populated) subfamily BI317_01150 SM00530 Helix-turn-helix XRE-family like proteins BI317_01205 SM00155 Phospholipase D. Active site motifs. BI317_01250 SM00347 helix_turn_helix multiple antibiotic resistance protein BI317_01315 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BI317_01315 SM00091 PAS domain BI317_01350 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BI317_01350 SM01232 BI317_01350 BI317_01365 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BI317_01365 SM00388 His Kinase A (phosphoacceptor) domain BI317_01405 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BI317_01420 SM00354 helix_turn _helix lactose operon repressor BI317_01430 SM00563 Phosphate acyltransferases BI317_01435 SM00829 Enoylreductase BI317_01490 SM00633 Glycosyl hydrolase family 10 BI317_01505 SM00633 Glycosyl hydrolase family 10 BI317_01515 SM00612 BI317_01515 BI317_01555 SM00758 BI317_01555 BI317_01555 SM01217 BI317_01555 BI317_01565 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BI317_01580 SM00354 helix_turn _helix lactose operon repressor BI317_01655 SM00567 E-Z type HEAT repeats BI317_01660 SM00382 ATPases associated with a variety of cellular activities BI317_01670 SM00836 DALR anticodon binding domain BI317_01715 SM00564 beta-propeller repeat BI317_01740 SM00387 Histidine kinase-like ATPases BI317_01740 SM00388 His Kinase A (phosphoacceptor) domain BI317_01740 SM00448 cheY-homologous receiver domain BI317_01755 SM00342 helix_turn_helix, arabinose operon control protein BI317_01760 SM00346 helix_turn_helix isocitrate lyase regulation BI317_01775 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BI317_01840 SM00421 helix_turn_helix, Lux Regulon BI317_01840 SM00448 cheY-homologous receiver domain BI317_02005 SM00155 Phospholipase D. Active site motifs. BI317_02030 SM01266 BI317_02030 BI317_02040 SM00342 helix_turn_helix, arabinose operon control protein BI317_02065 SM00220 Serine/Threonine protein kinases, catalytic domain BI317_02075 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BI317_02075 SM00474 3'-5' exonuclease BI317_02075 SM00475 5'-3' exonuclease BI317_02075 SM00482 DNA polymerase A domain BI317_02135 SM00563 Phosphate acyltransferases BI317_02170 SM00822 BI317_02170 BI317_02210 SM00825 Beta-ketoacyl synthase BI317_02220 SM00248 ankyrin repeats BI317_02250 SM00116 Domain in cystathionine beta-synthase and other proteins. BI317_02250 SM00924 MgtE intracellular N domain BI317_02270 SM00881 CoA binding domain BI317_02350 SM00382 ATPases associated with a variety of cellular activities BI317_02380 SM00530 Helix-turn-helix XRE-family like proteins BI317_02390 SM00382 ATPases associated with a variety of cellular activities BI317_02410 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BI317_02460 SM01004 Delta-aminolevulinic acid dehydratase BI317_02510 SM00491 BI317_02510 BI317_02520 SM01060 BI317_02520 BI317_02525 SM00248 ankyrin repeats BI317_02545 SM00448 cheY-homologous receiver domain BI317_02545 SM00862 Transcriptional regulatory protein, C terminal BI317_02550 SM00387 Histidine kinase-like ATPases BI317_02550 SM00388 His Kinase A (phosphoacceptor) domain BI317_02615 SM00960 Roadblock/LC7 domain BI317_02645 SM00849 Metallo-beta-lactamase superfamily BI317_02705 SM00382 ATPases associated with a variety of cellular activities BI317_02720 SM00421 helix_turn_helix, Lux Regulon BI317_02720 SM00448 cheY-homologous receiver domain BI317_02735 SM01060 BI317_02735 BI317_02775 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BI317_02795 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BI317_02795 SM00387 Histidine kinase-like ATPases BI317_02795 SM00388 His Kinase A (phosphoacceptor) domain BI317_02855 SM00052 Putative diguanylate phosphodiesterase BI317_02870 SM00382 ATPases associated with a variety of cellular activities BI317_02880 SM00938 Nitrogen regulatory protein P-II BI317_02915 SM00823 Phosphopantetheine attachment site BI317_02915 SM00824 Thioesterase BI317_02940 SM00836 DALR anticodon binding domain BI317_02940 SM01016 Arginyl tRNA synthetase N terminal dom BI317_02970 SM01259 BI317_02970 BI317_02990 SM00470 ParB-like nuclease domain BI317_03035 SM00363 S4 RNA-binding domain BI317_03130 SM00400 zinc finger BI317_03130 SM00493 BI317_03130 BI317_03130 SM00766 DNA primase DnaG DnaB-binding BI317_03155 SM00905 Dihydroneopterin aldolase BI317_03160 SM01217 BI317_03160 BI317_03210 SM01150 BI317_03210 BI317_03255 SM00644 BI317_03255 BI317_03265 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BI317_03300 SM00257 Lysin motif BI317_03320 SM00421 helix_turn_helix, Lux Regulon BI317_03345 SM00357 Cold shock protein domain BI317_03345 SM00382 ATPases associated with a variety of cellular activities BI317_03345 SM00959 Rho termination factor, N-terminal domain BI317_03355 SM00487 DEAD-like helicases superfamily BI317_03355 SM00490 helicase superfamily c-terminal domain BI317_03360 SM00382 ATPases associated with a variety of cellular activities BI317_03370 SM00448 cheY-homologous receiver domain BI317_03375 SM00986 Uracil DNA glycosylase superfamily BI317_03375 SM00987 UreE urease accessory protein, C-terminal domain BI317_03420 SM00487 DEAD-like helicases superfamily BI317_03420 SM00490 helicase superfamily c-terminal domain BI317_03470 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BI317_03470 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BI317_03470 SM00493 BI317_03470 BI317_03495 SM00257 Lysin motif BI317_03645 SM00344 helix_turn_helix ASNC type BI317_03655 SM01005 Alanine racemase, C-terminal domain BI317_03675 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BI317_03675 SM00091 PAS domain BI317_03675 SM00387 Histidine kinase-like ATPases BI317_03675 SM00388 His Kinase A (phosphoacceptor) domain BI317_03675 SM00448 cheY-homologous receiver domain BI317_03735 SM00382 ATPases associated with a variety of cellular activities BI317_03735 SM00930 BI317_03735 BI317_03760 SM00986 Uracil DNA glycosylase superfamily BI317_03760 SM00987 UreE urease accessory protein, C-terminal domain BI317_03825 SM00382 ATPases associated with a variety of cellular activities BI317_03835 SM00830 Chorismate mutase type II BI317_03865 SM00387 Histidine kinase-like ATPases BI317_03870 SM00382 ATPases associated with a variety of cellular activities BI317_03870 SM00448 cheY-homologous receiver domain BI317_03885 SM00382 ATPases associated with a variety of cellular activities BI317_03900 SM00100 Cyclic nucleotide-monophosphate binding domain BI317_03900 SM00419 helix_turn_helix, cAMP Regulatory protein BI317_03955 SM00825 Beta-ketoacyl synthase BI317_03990 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BI317_04020 SM00487 DEAD-like helicases superfamily BI317_04020 SM00490 helicase superfamily c-terminal domain BI317_04060 SM00116 Domain in cystathionine beta-synthase and other proteins. BI317_04080 SM00382 ATPases associated with a variety of cellular activities BI317_04145 SM00893 Electron transfer flavoprotein domain BI317_04150 SM00893 Electron transfer flavoprotein domain BI317_04185 SM00882 Coenzyme A transferase BI317_04190 SM00882 Coenzyme A transferase BI317_04230 SM00382 ATPases associated with a variety of cellular activities BI317_04245 SM00528 Domain in histone-like proteins of HNS family BI317_04280 SM00656 BI317_04280 BI317_04335 SM01211 BI317_04335 BI317_04360 SM00382 ATPases associated with a variety of cellular activities BI317_04455 SM00345 helix_turn_helix gluconate operon transcriptional repressor BI317_04455 SM00866 BI317_04455 BI317_04530 SM00382 ATPases associated with a variety of cellular activities BI317_04605 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BI317_04635 SM00387 Histidine kinase-like ATPases BI317_04635 SM00388 His Kinase A (phosphoacceptor) domain BI317_04640 SM00448 cheY-homologous receiver domain BI317_04640 SM00862 Transcriptional regulatory protein, C terminal BI317_04750 SM00842 Cell division protein FtsA BI317_04755 SM00864 Tubulin/FtsZ family, GTPase domain BI317_04755 SM00865 Tubulin/FtsZ family, C-terminal domain BI317_04775 SM00957 SecA DEAD-like domain BI317_04775 SM00958 SecA preprotein cross-linking domain BI317_04815 SM00829 Enoylreductase BI317_04870 SM00996 S-adenosyl-L-homocysteine hydrolase BI317_04870 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BI317_05025 SM00382 ATPases associated with a variety of cellular activities BI317_05045 SM00382 ATPases associated with a variety of cellular activities BI317_05055 SM00448 cheY-homologous receiver domain BI317_05055 SM00862 Transcriptional regulatory protein, C terminal BI317_05060 SM00387 Histidine kinase-like ATPases BI317_05060 SM00388 His Kinase A (phosphoacceptor) domain BI317_05110 SM00382 ATPases associated with a variety of cellular activities BI317_05145 SM00650 Ribosomal RNA adenine dimethylases BI317_05205 SM00345 helix_turn_helix gluconate operon transcriptional repressor BI317_05205 SM00895 BI317_05205 BI317_05240 SM00347 helix_turn_helix multiple antibiotic resistance protein BI317_05310 SM00448 cheY-homologous receiver domain BI317_05315 SM00387 Histidine kinase-like ATPases BI317_05315 SM00388 His Kinase A (phosphoacceptor) domain BI317_05315 SM00448 cheY-homologous receiver domain BI317_05320 SM00421 helix_turn_helix, Lux Regulon BI317_05385 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BI317_05385 SM00475 5'-3' exonuclease BI317_05500 SM00852 Probable molybdopterin binding domain BI317_05510 SM00028 Tetratricopeptide repeats BI317_05515 SM00937 BI317_05515 BI317_05545 SM01400 BI317_05545 BI317_05595 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BI317_05595 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BI317_05600 SM00649 Ribosomal protein L11/L12 BI317_05625 SM00663 RNA polymerase I subunit A N-terminus BI317_05640 SM00838 Elongation factor G C-terminus BI317_05640 SM00889 Elongation factor G, domain IV BI317_05650 SM01403 BI317_05650 BI317_05670 SM01382 BI317_05670 BI317_05670 SM01383 BI317_05670 BI317_05685 SM00322 K homology RNA-binding domain BI317_05705 SM01374 BI317_05705 BI317_05710 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BI317_05770 SM00363 S4 RNA-binding domain BI317_05770 SM01390 BI317_05770 BI317_05775 SM00662 RNA polymerases D BI317_05815 SM00838 Elongation factor G C-terminus BI317_05850 SM00829 Enoylreductase BI317_05895 SM00382 ATPases associated with a variety of cellular activities BI317_05905 SM00829 Enoylreductase BI317_05925 SM00855 Phosphoglycerate mutase family BI317_05975 SM00014 Acid phosphatase homologues BI317_05995 SM00387 Histidine kinase-like ATPases BI317_05995 SM00388 His Kinase A (phosphoacceptor) domain BI317_06000 SM00448 cheY-homologous receiver domain BI317_06000 SM00862 Transcriptional regulatory protein, C terminal BI317_06020 SM01329 BI317_06020 BI317_06150 SM00530 Helix-turn-helix XRE-family like proteins BI317_06340 SM00387 Histidine kinase-like ATPases BI317_06360 SM00382 ATPases associated with a variety of cellular activities BI317_06360 SM00994 ClpX C4-type zinc finger BI317_06360 SM01086 C-terminal, D2-small domain, of ClpB protein BI317_06365 SM00382 ATPases associated with a variety of cellular activities BI317_06365 SM00464 Found in ATP-dependent protease La (LON) BI317_06370 SM00411 bacterial (prokaryotic) histone like domain BI317_06395 SM00257 Lysin motif BI317_06400 SM00849 Metallo-beta-lactamase superfamily BI317_06415 SM00479 BI317_06415 BI317_06420 SM00331 Sigma factor PP2C-like phosphatases BI317_06420 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BI317_06445 SM00849 Metallo-beta-lactamase superfamily BI317_06450 SM00729 Elongator protein 3, MiaB family, Radical SAM BI317_06480 SM00382 ATPases associated with a variety of cellular activities BI317_06490 SM00493 BI317_06490 BI317_06505 SM00460 Transglutaminase/protease-like homologues BI317_06515 SM00382 ATPases associated with a variety of cellular activities BI317_06525 SM01126 BI317_06525 BI317_06560 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BI317_06565 SM00822 BI317_06565 BI317_06575 SM00825 Beta-ketoacyl synthase BI317_06620 SM00382 ATPases associated with a variety of cellular activities BI317_06660 SM01359 BI317_06660 BI317_06660 SM01360 BI317_06660 BI317_06700 SM00271 DnaJ molecular chaperone homology domain BI317_06705 SM00448 cheY-homologous receiver domain BI317_06710 SM00244 prohibitin homologues BI317_06715 SM00244 prohibitin homologues BI317_06720 SM01321 BI317_06720 BI317_06730 SM00788 Adenylosuccinate synthetase BI317_06775 SM00487 DEAD-like helicases superfamily BI317_06825 SM00645 Papain family cysteine protease BI317_06850 SM00855 Phosphoglycerate mutase family BI317_06900 SM00052 Putative diguanylate phosphodiesterase BI317_06905 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BI317_06930 SM01217 BI317_06930 BI317_06935 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BI317_06940 SM01092 CO dehydrogenase flavoprotein C-terminal domain BI317_06960 SM00965 Secretin and TonB N terminus short domain BI317_06970 SM00915 Jacalin-like lectin domain BI317_06980 SM00966 SpoVT / AbrB like domain BI317_07000 SM00481 DNA polymerase alpha chain like domain BI317_07035 SM00091 PAS domain BI317_07035 SM00342 helix_turn_helix, arabinose operon control protein BI317_07045 SM01060 BI317_07045 BI317_07110 SM00448 cheY-homologous receiver domain BI317_07110 SM00862 Transcriptional regulatory protein, C terminal BI317_07115 SM00387 Histidine kinase-like ATPases BI317_07115 SM00388 His Kinase A (phosphoacceptor) domain BI317_07150 SM00421 helix_turn_helix, Lux Regulon BI317_07150 SM00448 cheY-homologous receiver domain BI317_07165 SM00478 endonuclease III BI317_07190 SM00244 prohibitin homologues BI317_07290 SM00904 Riboflavin kinase BI317_07335 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BI317_07340 SM00382 ATPases associated with a variety of cellular activities BI317_07350 SM00862 Transcriptional regulatory protein, C terminal BI317_07355 SM00342 helix_turn_helix, arabinose operon control protein BI317_07400 SM00387 Histidine kinase-like ATPases BI317_07400 SM00388 His Kinase A (phosphoacceptor) domain BI317_07405 SM00387 Histidine kinase-like ATPases BI317_07405 SM00388 His Kinase A (phosphoacceptor) domain BI317_07405 SM00448 cheY-homologous receiver domain BI317_07430 SM00387 Histidine kinase-like ATPases BI317_07430 SM00388 His Kinase A (phosphoacceptor) domain BI317_07430 SM00448 cheY-homologous receiver domain BI317_07440 SM00138 Methyltransferase, chemotaxis proteins BI317_07445 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BI317_07445 SM00387 Histidine kinase-like ATPases BI317_07445 SM00388 His Kinase A (phosphoacceptor) domain BI317_07445 SM00448 cheY-homologous receiver domain BI317_07450 SM00387 Histidine kinase-like ATPases BI317_07450 SM00388 His Kinase A (phosphoacceptor) domain BI317_07455 SM00448 cheY-homologous receiver domain BI317_07475 SM00813 Alpha-L-arabinofuranosidase C-terminus BI317_07485 SM00646 BI317_07485 BI317_07515 SM00382 ATPases associated with a variety of cellular activities BI317_07515 SM00962 SRP54-type protein, GTPase domain BI317_07515 SM00963 SRP54-type protein, helical bundle domain BI317_07560 SM00363 S4 RNA-binding domain BI317_07565 SM01126 BI317_07565 BI317_07580 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BI317_07580 SM00534 ATPase domain of DNA mismatch repair MUTS family BI317_07605 SM00812 Alpha-L-fucosidase BI317_07645 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BI317_07665 SM00530 Helix-turn-helix XRE-family like proteins BI317_07710 SM00028 Tetratricopeptide repeats BI317_07720 SM00028 Tetratricopeptide repeats BI317_07745 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BI317_07750 SM00838 Elongation factor G C-terminus BI317_07765 SM00358 Double-stranded RNA binding motif BI317_07765 SM00535 Ribonuclease III family BI317_07780 SM00448 cheY-homologous receiver domain BI317_07800 SM01118 BI317_07800 BI317_07835 SM00357 Cold shock protein domain BI317_07850 SM00487 DEAD-like helicases superfamily BI317_07850 SM00490 helicase superfamily c-terminal domain BI317_07880 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BI317_07880 SM00267 diguanylate cyclase BI317_07900 SM00869 Autotransporter beta-domain BI317_07905 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BI317_08130 SM00382 ATPases associated with a variety of cellular activities BI317_08155 SM00342 helix_turn_helix, arabinose operon control protein BI317_08255 SM00481 DNA polymerase alpha chain like domain BI317_08295 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BI317_08325 SM00267 diguanylate cyclase BI317_08355 SM00972 Spore Coat Protein U domain BI317_08370 SM00972 Spore Coat Protein U domain BI317_08380 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BI317_08410 SM00710 Parallel beta-helix repeats BI317_08410 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses BI317_08450 SM00434 DNA Topoisomerase IV BI317_08460 SM00347 helix_turn_helix multiple antibiotic resistance protein BI317_08495 SM01217 BI317_08495 BI317_08500 SM00631 BI317_08500 BI317_08530 SM00347 helix_turn_helix multiple antibiotic resistance protein BI317_08550 SM00382 ATPases associated with a variety of cellular activities BI317_08570 SM00947 Carbonic anhydrase BI317_08590 SM00357 Cold shock protein domain BI317_08740 SM00316 Ribosomal protein S1-like RNA-binding domain BI317_08775 SM01351 BI317_08775 BI317_08790 SM00977 TilS substrate C-terminal domain BI317_08795 SM00098 Alkaline phosphatase homologues BI317_08845 SM01160 BI317_08845 BI317_08925 SM00729 Elongator protein 3, MiaB family, Radical SAM BI317_08950 SM01217 BI317_08950 BI317_08970 SM00347 helix_turn_helix multiple antibiotic resistance protein BI317_08995 SM00257 Lysin motif BI317_09030 SM00859 Semialdehyde dehydrogenase, NAD binding domain BI317_09095 SM00052 Putative diguanylate phosphodiesterase BI317_09095 SM00267 diguanylate cyclase BI317_09095 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BI317_09115 SM00822 BI317_09115 BI317_09160 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BI317_09165 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BI317_09215 SM00316 Ribosomal protein S1-like RNA-binding domain BI317_09215 SM00322 K homology RNA-binding domain BI317_09235 SM01387 BI317_09235 BI317_09240 SM00316 Ribosomal protein S1-like RNA-binding domain BI317_09240 SM00322 K homology RNA-binding domain BI317_09265 SM01001 AIR carboxylase BI317_09345 SM00487 DEAD-like helicases superfamily BI317_09345 SM00490 helicase superfamily c-terminal domain BI317_09485 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BI317_09510 SM00873 B3/4 domain BI317_09510 SM00874 tRNA synthetase B5 domain BI317_09510 SM00896 Ferredoxin-fold anticodon binding domain BI317_09515 SM00411 bacterial (prokaryotic) histone like domain BI317_09520 SM00422 helix_turn_helix, mercury resistance BI317_09605 SM00849 Metallo-beta-lactamase superfamily BI317_09635 SM00861 Transketolase, pyrimidine binding domain BI317_09640 SM00507 HNH nucleases BI317_09920 SM00495 Chitin-binding domain type 3 BI317_10025 SM00478 endonuclease III BI317_10030 SM00382 ATPases associated with a variety of cellular activities BI317_10030 SM00962 SRP54-type protein, GTPase domain BI317_10030 SM00963 SRP54-type protein, helical bundle domain BI317_10035 SM00342 helix_turn_helix, arabinose operon control protein BI317_10060 SM01130 BI317_10060 BI317_10120 SM00944 Pro-kumamolisin, activation domain BI317_10170 SM01126 BI317_10170 BI317_10185 SM00387 Histidine kinase-like ATPases BI317_10260 SM00344 helix_turn_helix ASNC type BI317_10275 SM01323 BI317_10275 BI317_10385 SM00354 helix_turn _helix lactose operon repressor BI317_10445 SM00829 Enoylreductase BI317_10480 SM00829 Enoylreductase BI317_10495 SM00448 cheY-homologous receiver domain BI317_10495 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BI317_10500 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BI317_10500 SM00091 PAS domain BI317_10500 SM00387 Histidine kinase-like ATPases BI317_10500 SM00388 His Kinase A (phosphoacceptor) domain BI317_10500 SM00448 cheY-homologous receiver domain BI317_10500 SM01079 BI317_10500 BI317_10560 SM00267 diguanylate cyclase BI317_10560 SM00448 cheY-homologous receiver domain BI317_10575 SM01230 BI317_10575 BI317_10585 SM01230 BI317_10585 BI317_10615 SM00382 ATPases associated with a variety of cellular activities BI317_10660 SM00116 Domain in cystathionine beta-synthase and other proteins. BI317_10660 SM01091 Transporter associated domain BI317_10685 SM00729 Elongator protein 3, MiaB family, Radical SAM BI317_10740 SM00487 DEAD-like helicases superfamily BI317_10740 SM00490 helicase superfamily c-terminal domain BI317_10750 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BI317_10750 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BI317_10755 SM00260 Two component signalling adaptor domain BI317_10760 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BI317_10760 SM00267 diguanylate cyclase BI317_10770 SM00528 Domain in histone-like proteins of HNS family BI317_10775 SM00474 3'-5' exonuclease BI317_10815 SM00646 BI317_10815 BI317_10820 SM00853 MutL C terminal dimerisation domain BI317_10820 SM01340 BI317_10820 BI317_10840 SM00822 BI317_10840 BI317_10860 SM00052 Putative diguanylate phosphodiesterase BI317_10860 SM00267 diguanylate cyclase BI317_10870 SM01322 BI317_10870 BI317_10880 SM00357 Cold shock protein domain BI317_10905 SM00382 ATPases associated with a variety of cellular activities BI317_10905 SM00487 DEAD-like helicases superfamily BI317_10905 SM00490 helicase superfamily c-terminal domain BI317_10910 SM00382 ATPases associated with a variety of cellular activities BI317_10990 SM00422 helix_turn_helix, mercury resistance BI317_11015 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BI317_11025 SM00849 Metallo-beta-lactamase superfamily BI317_11045 SM00421 helix_turn_helix, Lux Regulon BI317_11055 SM00656 BI317_11055 BI317_11085 SM00924 MgtE intracellular N domain BI317_11130 SM00382 ATPases associated with a variety of cellular activities BI317_11150 SM00116 Domain in cystathionine beta-synthase and other proteins. BI317_11250 SM00052 Putative diguanylate phosphodiesterase BI317_11250 SM00267 diguanylate cyclase BI317_11250 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BI317_11260 SM00841 Elongation factor P, C-terminal BI317_11260 SM01185 BI317_11260 BI317_11315 SM00656 BI317_11315 BI317_11365 SM01234 BI317_11365 BI317_11390 SM00840 BI317_11390 BI317_11445 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BI317_11460 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BI317_11490 SM00382 ATPases associated with a variety of cellular activities BI317_11495 SM00382 ATPases associated with a variety of cellular activities BI317_11555 SM00382 ATPases associated with a variety of cellular activities BI317_11580 SM00363 S4 RNA-binding domain BI317_11605 SM00354 helix_turn _helix lactose operon repressor BI317_11680 SM00316 Ribosomal protein S1-like RNA-binding domain BI317_11685 SM00411 bacterial (prokaryotic) histone like domain BI317_11705 SM00822 BI317_11705 BI317_11730 SM00116 Domain in cystathionine beta-synthase and other proteins. BI317_11730 SM01240 BI317_11730 BI317_11775 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BI317_11790 SM00529 Helix-turn-helix diphteria tox regulatory element BI317_11800 SM00479 BI317_11800 BI317_11870 SM00316 Ribosomal protein S1-like RNA-binding domain BI317_11870 SM00732 Likely ribonuclease with RNase H fold. BI317_11875 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BI317_11875 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BI317_11875 SM00091 PAS domain BI317_11875 SM00387 Histidine kinase-like ATPases BI317_11875 SM00388 His Kinase A (phosphoacceptor) domain BI317_11875 SM00448 cheY-homologous receiver domain BI317_11880 SM00448 cheY-homologous receiver domain BI317_11975 SM00382 ATPases associated with a variety of cellular activities BI317_12030 SM00382 ATPases associated with a variety of cellular activities BI317_12040 SM00849 Metallo-beta-lactamase superfamily BI317_12055 SM00382 ATPases associated with a variety of cellular activities BI317_12075 SM00226 Low molecular weight phosphatase family BI317_12085 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BI317_12085 SM00465 GIY-YIG type nucleases (URI domain) BI317_12115 SM00984 UDP binding domain BI317_12135 SM00450 Rhodanese Homology Domain BI317_12140 SM00421 helix_turn_helix, Lux Regulon BI317_12140 SM00448 cheY-homologous receiver domain BI317_12145 SM00316 Ribosomal protein S1-like RNA-binding domain BI317_12150 SM00363 S4 RNA-binding domain BI317_12420 SM00421 helix_turn_helix, Lux Regulon BI317_12420 SM00448 cheY-homologous receiver domain BI317_12425 SM00091 PAS domain BI317_12425 SM00387 Histidine kinase-like ATPases BI317_12460 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BI317_12460 SM00387 Histidine kinase-like ATPases BI317_12465 SM00448 cheY-homologous receiver domain BI317_12490 SM00347 helix_turn_helix multiple antibiotic resistance protein BI317_12505 SM00448 cheY-homologous receiver domain BI317_12505 SM00862 Transcriptional regulatory protein, C terminal BI317_12510 SM01126 BI317_12510 BI317_12525 SM00869 Autotransporter beta-domain BI317_12530 SM00869 Autotransporter beta-domain BI317_12535 SM00052 Putative diguanylate phosphodiesterase BI317_12585 SM00858 BI317_12585 BI317_12600 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BI317_12630 SM00448 cheY-homologous receiver domain BI317_12630 SM01012 BI317_12630 BI317_12650 SM00852 Probable molybdopterin binding domain BI317_12670 SM00450 Rhodanese Homology Domain BI317_12675 SM00852 Probable molybdopterin binding domain BI317_12680 SM00382 ATPases associated with a variety of cellular activities BI317_12685 SM00564 beta-propeller repeat BI317_12700 SM00028 Tetratricopeptide repeats BI317_12710 SM00562 BI317_12710 BI317_12735 SM00382 ATPases associated with a variety of cellular activities BI317_12750 SM00382 ATPases associated with a variety of cellular activities BI317_12750 SM00843 BI317_12750 BI317_12770 SM00316 Ribosomal protein S1-like RNA-binding domain BI317_12775 SM00382 ATPases associated with a variety of cellular activities BI317_12775 SM01086 C-terminal, D2-small domain, of ClpB protein BI317_12800 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BI317_12835 SM00052 Putative diguanylate phosphodiesterase BI317_12835 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BI317_12835 SM00091 PAS domain BI317_12835 SM00267 diguanylate cyclase BI317_12840 SM00091 PAS domain BI317_12840 SM00387 Histidine kinase-like ATPases BI317_12845 SM00052 Putative diguanylate phosphodiesterase BI317_12845 SM00267 diguanylate cyclase BI317_12845 SM00448 cheY-homologous receiver domain BI317_12850 SM00387 Histidine kinase-like ATPases BI317_12865 SM00858 BI317_12865 BI317_12870 SM00260 Two component signalling adaptor domain BI317_12870 SM00448 cheY-homologous receiver domain BI317_12925 SM00047 Lysozyme subfamily 2 BI317_12965 SM00421 helix_turn_helix, Lux Regulon BI317_12965 SM00448 cheY-homologous receiver domain BI317_12975 SM00448 cheY-homologous receiver domain BI317_12980 SM00382 ATPases associated with a variety of cellular activities BI317_13000 SM00822 BI317_13000 BI317_13005 SM00822 BI317_13005 BI317_13080 SM00382 ATPases associated with a variety of cellular activities BI317_13130 SM00267 diguanylate cyclase BI317_13135 SM00267 diguanylate cyclase BI317_13140 SM00052 Putative diguanylate phosphodiesterase BI317_13140 SM00267 diguanylate cyclase BI317_13155 SM00382 ATPases associated with a variety of cellular activities BI317_13155 SM00962 SRP54-type protein, GTPase domain BI317_13170 SM00448 cheY-homologous receiver domain BI317_13180 SM00073 Histidine Phosphotransfer domain BI317_13180 SM00260 Two component signalling adaptor domain BI317_13180 SM00387 Histidine kinase-like ATPases BI317_13180 SM01231 BI317_13180 BI317_13185 SM00530 Helix-turn-helix XRE-family like proteins BI317_13210 SM00260 Two component signalling adaptor domain BI317_13220 SM00448 cheY-homologous receiver domain BI317_13225 SM00073 Histidine Phosphotransfer domain BI317_13225 SM00260 Two component signalling adaptor domain BI317_13225 SM00387 Histidine kinase-like ATPases BI317_13225 SM01231 BI317_13225 BI317_13240 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BI317_13240 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BI317_13240 SM01049 BI317_13240 BI317_13245 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BI317_13245 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BI317_13250 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BI317_13250 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BI317_13255 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BI317_13255 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BI317_13260 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BI317_13260 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BI317_13265 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BI317_13265 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BI317_13270 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BI317_13270 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BI317_13275 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BI317_13275 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BI317_13295 SM00260 Two component signalling adaptor domain BI317_13305 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BI317_13305 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BI317_13310 SM00138 Methyltransferase, chemotaxis proteins BI317_13320 SM00448 cheY-homologous receiver domain BI317_13325 SM00052 Putative diguanylate phosphodiesterase BI317_13325 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BI317_13325 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BI317_13325 SM00091 PAS domain BI317_13325 SM00267 diguanylate cyclase BI317_13350 SM00966 SpoVT / AbrB like domain BI317_13375 SM00073 Histidine Phosphotransfer domain BI317_13375 SM00387 Histidine kinase-like ATPases BI317_13375 SM00388 His Kinase A (phosphoacceptor) domain BI317_13375 SM00448 cheY-homologous receiver domain BI317_13385 SM00448 cheY-homologous receiver domain BI317_13385 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BI317_13400 SM00850 LytTr DNA-binding domain BI317_13435 SM00851 MGS-like domain BI317_13435 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BI317_13445 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BI317_13475 SM00899 BI317_13475 BI317_13495 SM00841 Elongation factor P, C-terminal BI317_13495 SM01185 BI317_13495 BI317_13555 SM01007 Class II Aldolase and Adducin N-terminal domain BI317_13640 SM00100 Cyclic nucleotide-monophosphate binding domain BI317_13640 SM00419 helix_turn_helix, cAMP Regulatory protein BI317_13710 SM00028 Tetratricopeptide repeats BI317_13820 SM00352 Found in Pit-Oct-Unc transcription factors BI317_13820 SM00530 Helix-turn-helix XRE-family like proteins BI317_13920 SM00248 ankyrin repeats BI317_13955 SM00477 DNA/RNA non-specific endonuclease BI317_13955 SM00892 DNA/RNA non-specific endonuclease BI317_13960 SM00528 Domain in histone-like proteins of HNS family BI317_14065 SM00014 Acid phosphatase homologues BI317_14075 SM00387 Histidine kinase-like ATPases BI317_14080 SM00448 cheY-homologous receiver domain BI317_14095 SM00052 Putative diguanylate phosphodiesterase BI317_14095 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BI317_14095 SM00267 diguanylate cyclase BI317_14175 SM00646 BI317_14175 BI317_14215 SM00758 BI317_14215 BI317_14255 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BI317_14285 SM01130 BI317_14285 BI317_14305 SM00670 Large family of predicted nucleotide-binding domains BI317_14350 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BI317_14350 SM00091 PAS domain BI317_14350 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BI317_14365 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BI317_14375 SM00382 ATPases associated with a variety of cellular activities BI317_14420 SM00382 ATPases associated with a variety of cellular activities BI317_14430 SM01103 BI317_14430 BI317_14440 SM00257 Lysin motif BI317_14460 SM00463 Small MutS-related domain BI317_14485 SM01192 BI317_14485 BI317_14485 SM01193 BI317_14485 BI317_14510 SM00387 Histidine kinase-like ATPases BI317_14510 SM00433 TopoisomeraseII BI317_14540 SM01091 Transporter associated domain BI317_14575 SM00382 ATPases associated with a variety of cellular activities BI317_14585 SM00729 Elongator protein 3, MiaB family, Radical SAM BI317_14725 SM00028 Tetratricopeptide repeats BI317_14760 SM00248 ankyrin repeats BI317_14790 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BI317_14795 SM01092 CO dehydrogenase flavoprotein C-terminal domain BI317_14875 SM00732 Likely ribonuclease with RNase H fold. BI317_14920 SM00411 bacterial (prokaryotic) histone like domain BI317_14945 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain BI317_14960 SM00382 ATPases associated with a variety of cellular activities BI317_14995 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BI317_15000 SM00671 Sel1-like repeats. BI317_15085 SM00434 DNA Topoisomerase IV BI317_15110 SM00292 breast cancer carboxy-terminal domain BI317_15110 SM00532 Ligase N family BI317_15120 SM00771 ZipA, C-terminal domain (FtsZ-binding) BI317_15125 SM00968 SMC proteins Flexible Hinge Domain BI317_15175 SM00947 Carbonic anhydrase BI317_15200 SM00479 BI317_15200 BI317_15230 SM00981 BI317_15230 BI317_15240 SM00382 ATPases associated with a variety of cellular activities BI317_15260 SM00644 BI317_15260 BI317_15270 SM00450 Rhodanese Homology Domain BI317_15295 SM00478 endonuclease III BI317_15295 SM00525 BI317_15295 BI317_15325 SM00947 Carbonic anhydrase BI317_15360 SM00382 ATPases associated with a variety of cellular activities BI317_15375 SM00479 BI317_15375 BI317_15380 SM00267 diguanylate cyclase BI317_15385 SM00967 RNA 2'-O ribose methyltransferase substrate binding BI317_15395 SM00316 Ribosomal protein S1-like RNA-binding domain BI317_15395 SM00357 Cold shock protein domain BI317_15395 SM00955 BI317_15395 BI317_15420 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BI317_15430 SM01018 B12 binding domain BI317_15475 SM00984 UDP binding domain BI317_15495 SM00345 helix_turn_helix gluconate operon transcriptional repressor BI317_15500 SM00382 ATPases associated with a variety of cellular activities BI317_15530 SM01091 Transporter associated domain BI317_15550 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BI317_15560 SM00861 Transketolase, pyrimidine binding domain BI317_15585 SM00382 ATPases associated with a variety of cellular activities BI317_15625 SM00271 DnaJ molecular chaperone homology domain BI317_15730 SM00495 Chitin-binding domain type 3 BI317_16055 SM01126 BI317_16055 BI317_16075 SM00528 Domain in histone-like proteins of HNS family BI317_16085 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BI317_16085 SM00267 diguanylate cyclase BI317_16095 SM00267 diguanylate cyclase BI317_16180 SM00382 ATPases associated with a variety of cellular activities BI317_16215 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BI317_16215 SM00267 diguanylate cyclase BI317_16220 SM00363 S4 RNA-binding domain BI317_16225 SM00052 Putative diguanylate phosphodiesterase BI317_16225 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BI317_16225 SM00091 PAS domain BI317_16225 SM00267 diguanylate cyclase BI317_16230 SM00487 DEAD-like helicases superfamily BI317_16230 SM00490 helicase superfamily c-terminal domain BI317_16280 SM00342 helix_turn_helix, arabinose operon control protein BI317_16280 SM00478 endonuclease III BI317_16280 SM01009 AlkA N-terminal domain BI317_16315 SM00347 helix_turn_helix multiple antibiotic resistance protein BI317_16455 SM00645 Papain family cysteine protease BI317_16460 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BI317_16460 SM00387 Histidine kinase-like ATPases BI317_16460 SM00388 His Kinase A (phosphoacceptor) domain BI317_16465 SM00448 cheY-homologous receiver domain BI317_16465 SM00862 Transcriptional regulatory protein, C terminal BI317_16485 SM00487 DEAD-like helicases superfamily BI317_16485 SM00490 helicase superfamily c-terminal domain BI317_16485 SM00982 BI317_16485 BI317_16485 SM01058 CarD-like/TRCF domain BI317_16495 SM00073 Histidine Phosphotransfer domain BI317_16495 SM00260 Two component signalling adaptor domain BI317_16495 SM00387 Histidine kinase-like ATPases BI317_16495 SM01231 BI317_16495 BI317_16500 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BI317_16500 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BI317_16505 SM00260 Two component signalling adaptor domain BI317_16510 SM00052 Putative diguanylate phosphodiesterase BI317_16510 SM00448 cheY-homologous receiver domain BI317_16515 SM00138 Methyltransferase, chemotaxis proteins BI317_16520 SM00448 cheY-homologous receiver domain BI317_16525 SM00155 Phospholipase D. Active site motifs. BI317_16540 SM00855 Phosphoglycerate mutase family BI317_16590 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BI317_16590 SM00091 PAS domain BI317_16590 SM00387 Histidine kinase-like ATPases BI317_16590 SM00388 His Kinase A (phosphoacceptor) domain BI317_16590 SM00448 cheY-homologous receiver domain BI317_16595 SM00382 ATPases associated with a variety of cellular activities BI317_16600 SM00448 cheY-homologous receiver domain BI317_16605 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BI317_16605 SM00091 PAS domain BI317_16605 SM00387 Histidine kinase-like ATPases BI317_16605 SM00388 His Kinase A (phosphoacceptor) domain BI317_16605 SM00448 cheY-homologous receiver domain BI317_16610 SM00347 helix_turn_helix multiple antibiotic resistance protein BI317_16620 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BI317_16620 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BI317_16815 SM00382 ATPases associated with a variety of cellular activities BI317_16850 SM00028 Tetratricopeptide repeats BI317_16850 SM00220 Serine/Threonine protein kinases, catalytic domain BI317_16855 SM00530 Helix-turn-helix XRE-family like proteins BI317_16890 SM00477 DNA/RNA non-specific endonuclease BI317_16890 SM00892 DNA/RNA non-specific endonuclease BI317_16985 SM00830 Chorismate mutase type II BI317_17005 SM00240 Forkhead associated domain BI317_17025 SM00345 helix_turn_helix gluconate operon transcriptional repressor BI317_17025 SM00866 BI317_17025 BI317_17065 SM00387 Histidine kinase-like ATPases BI317_17065 SM00388 His Kinase A (phosphoacceptor) domain BI317_17065 SM00448 cheY-homologous receiver domain BI317_17090 SM00387 Histidine kinase-like ATPases BI317_17090 SM00388 His Kinase A (phosphoacceptor) domain BI317_17090 SM00448 cheY-homologous receiver domain BI317_17095 SM00867 YceI-like domain BI317_17105 SM00867 YceI-like domain BI317_17110 SM00357 Cold shock protein domain BI317_17170 SM00116 Domain in cystathionine beta-synthase and other proteins. BI317_17295 SM00812 Alpha-L-fucosidase BI317_17300 SM00636 BI317_17300 BI317_17320 SM00758 BI317_17320 BI317_17320 SM01217 BI317_17320 BI317_17360 SM01149 BI317_17360 BI317_17425 SM00220 Serine/Threonine protein kinases, catalytic domain BI317_17450 SM00369 Leucine-rich repeats, typical (most populated) subfamily BI317_17465 SM00327 von Willebrand factor (vWF) type A domain BI317_17500 SM00073 Histidine Phosphotransfer domain BI317_17500 SM00260 Two component signalling adaptor domain BI317_17500 SM00387 Histidine kinase-like ATPases BI317_17500 SM00448 cheY-homologous receiver domain BI317_17500 SM01231 BI317_17500 BI317_17505 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BI317_17510 SM00260 Two component signalling adaptor domain BI317_17515 SM00448 cheY-homologous receiver domain BI317_17520 SM00448 cheY-homologous receiver domain BI317_17540 SM00491 BI317_17540 BI317_17565 SM00954 Region found in RelA / SpoT proteins BI317_17610 SM00382 ATPases associated with a variety of cellular activities BI317_17610 SM00487 DEAD-like helicases superfamily BI317_17610 SM00490 helicase superfamily c-terminal domain BI317_17610 SM00847 Helicase associated domain (HA2) Add an annotation BI317_17620 SM00341 Helicase and RNase D C-terminal BI317_17620 SM00487 DEAD-like helicases superfamily BI317_17620 SM00490 helicase superfamily c-terminal domain BI317_17620 SM00956 BI317_17620 BI317_17630 SM00448 cheY-homologous receiver domain BI317_17635 SM00363 S4 RNA-binding domain BI317_17665 SM00448 cheY-homologous receiver domain BI317_17670 SM00091 PAS domain BI317_17670 SM00911 HWE histidine kinase BI317_17700 SM00487 DEAD-like helicases superfamily BI317_17725 SM00028 Tetratricopeptide repeats BI317_17760 SM00382 ATPases associated with a variety of cellular activities BI317_17775 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BI317_17820 SM00834 Putative regulatory protein BI317_17865 SM00382 ATPases associated with a variety of cellular activities BI317_17935 SM00342 helix_turn_helix, arabinose operon control protein BI317_17935 SM00871 Bacterial transcription activator, effector binding domain BI317_17965 SM00382 ATPases associated with a variety of cellular activities BI317_17965 SM01086 C-terminal, D2-small domain, of ClpB protein BI317_17970 SM00382 ATPases associated with a variety of cellular activities BI317_17980 SM00062 Bacterial periplasmic substrate-binding proteins BI317_18060 SM00564 beta-propeller repeat BI317_18065 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BI317_18115 SM00849 Metallo-beta-lactamase superfamily BI317_18135 SM00881 CoA binding domain BI317_18145 SM00387 Histidine kinase-like ATPases BI317_18145 SM00388 His Kinase A (phosphoacceptor) domain BI317_18150 SM00382 ATPases associated with a variety of cellular activities BI317_18150 SM00448 cheY-homologous receiver domain BI317_18195 SM00387 Histidine kinase-like ATPases BI317_18195 SM00388 His Kinase A (phosphoacceptor) domain BI317_18200 SM00448 cheY-homologous receiver domain BI317_18200 SM00862 Transcriptional regulatory protein, C terminal BI317_18210 SM00642 Alpha-amylase domain BI317_18215 SM00528 Domain in histone-like proteins of HNS family BI317_18240 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BI317_18240 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BI317_18565 SM00530 Helix-turn-helix XRE-family like proteins BI317_18615 SM00869 Autotransporter beta-domain BI317_18670 SM00354 helix_turn _helix lactose operon repressor BI317_18700 SM00967 RNA 2'-O ribose methyltransferase substrate binding BI317_18770 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BI317_18770 SM00387 Histidine kinase-like ATPases BI317_18800 SM00506 Appr-1"-p processing enzyme BI317_18845 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BI317_18870 SM00849 Metallo-beta-lactamase superfamily BI317_18885 SM00382 ATPases associated with a variety of cellular activities BI317_18935 SM00822 BI317_18935 BI317_18955 SM00861 Transketolase, pyrimidine binding domain BI317_18975 SM00028 Tetratricopeptide repeats BI317_18975 SM00327 von Willebrand factor (vWF) type A domain BI317_18980 SM00327 von Willebrand factor (vWF) type A domain BI317_18995 SM00382 ATPases associated with a variety of cellular activities BI317_19000 SM00965 Secretin and TonB N terminus short domain BI317_19050 SM00487 DEAD-like helicases superfamily BI317_19050 SM00490 helicase superfamily c-terminal domain BI317_19060 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BI317_19060 SM00954 Region found in RelA / SpoT proteins BI317_19065 SM01409 BI317_19065 BI317_19070 SM00072 Guanylate kinase homologues. BI317_19095 SM00729 Elongator protein 3, MiaB family, Radical SAM BI317_19115 SM01011 Aminopeptidase P, N-terminal domain BI317_19190 SM00028 Tetratricopeptide repeats BI317_19190 SM00382 ATPases associated with a variety of cellular activities BI317_19190 SM00421 helix_turn_helix, Lux Regulon BI317_19280 SM00464 Found in ATP-dependent protease La (LON) BI317_19335 SM00342 helix_turn_helix, arabinose operon control protein BI317_19340 SM00862 Transcriptional regulatory protein, C terminal BI317_19360 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BI317_19390 SM00917 LeuA allosteric (dimerisation) domain BI317_19395 SM01329 BI317_19395 BI317_19420 SM00267 diguanylate cyclase BI317_19475 SM00919 Malic enzyme, NAD binding domain BI317_19475 SM01274 BI317_19475 BI317_19490 SM00387 Histidine kinase-like ATPases BI317_19490 SM00388 His Kinase A (phosphoacceptor) domain BI317_19490 SM00448 cheY-homologous receiver domain BI317_19505 SM00421 helix_turn_helix, Lux Regulon BI317_19505 SM00448 cheY-homologous receiver domain BI317_19515 SM00387 Histidine kinase-like ATPases BI317_19515 SM00388 His Kinase A (phosphoacceptor) domain BI317_19520 SM00448 cheY-homologous receiver domain BI317_19520 SM00862 Transcriptional regulatory protein, C terminal BI317_19535 SM00822 BI317_19535 BI317_19540 SM00354 helix_turn _helix lactose operon repressor BI317_19555 SM00642 Alpha-amylase domain BI317_19580 SM01154 BI317_19580 BI317_19615 SM00382 ATPases associated with a variety of cellular activities BI317_19685 SM00450 Rhodanese Homology Domain BI317_19775 SM00345 helix_turn_helix gluconate operon transcriptional repressor BI317_19790 SM00829 Enoylreductase BI317_19815 SM00448 cheY-homologous receiver domain BI317_19815 SM00862 Transcriptional regulatory protein, C terminal BI317_19820 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BI317_19820 SM00387 Histidine kinase-like ATPases BI317_19820 SM00388 His Kinase A (phosphoacceptor) domain BI317_19915 SM00354 helix_turn _helix lactose operon repressor BI317_19925 SM00345 helix_turn_helix gluconate operon transcriptional repressor BI317_19925 SM00866 BI317_19925 BI317_19995 SM00382 ATPases associated with a variety of cellular activities BI317_20020 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BI317_20050 SM00387 Histidine kinase-like ATPases BI317_20050 SM00388 His Kinase A (phosphoacceptor) domain BI317_20050 SM00448 cheY-homologous receiver domain BI317_20055 SM00448 cheY-homologous receiver domain BI317_20060 SM00387 Histidine kinase-like ATPases BI317_20060 SM00388 His Kinase A (phosphoacceptor) domain BI317_20065 SM00749 bacterial OsmY and nodulation domain BI317_20075 SM01350 BI317_20075 BI317_20125 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BI317_20125 SM00245 tail specific protease BI317_20130 SM00729 Elongator protein 3, MiaB family, Radical SAM BI317_20150 SM00936 Penicillin-binding protein 5, C-terminal domain BI317_20190 SM00268 Actin BI317_20200 SM00382 ATPases associated with a variety of cellular activities BI317_20215 SM00829 Enoylreductase BI317_20230 SM00062 Bacterial periplasmic substrate-binding proteins BI317_20230 SM00248 ankyrin repeats BI317_20235 SM00564 beta-propeller repeat BI317_20255 SM01263 BI317_20255 BI317_20260 SM00267 diguanylate cyclase BI317_20300 SM00382 ATPases associated with a variety of cellular activities BI317_20300 SM01086 C-terminal, D2-small domain, of ClpB protein BI317_20350 SM01126 BI317_20350 BI317_20395 SM00448 cheY-homologous receiver domain BI317_20395 SM00850 LytTr DNA-binding domain BI317_20435 SM00267 diguanylate cyclase BI317_20445 SM00637 BI317_20445 BI317_20460 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BI317_20460 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BI317_20460 SM00091 PAS domain BI317_20460 SM00267 diguanylate cyclase BI317_20475 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BI317_20490 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BI317_20490 SM01232 BI317_20490 BI317_20545 SM00062 Bacterial periplasmic substrate-binding proteins BI317_20575 SM00267 diguanylate cyclase BI317_20660 SM00530 Helix-turn-helix XRE-family like proteins BI317_20745 SM00974 BI317_20745 BI317_20775 SM00901 BI317_20775 BI317_20825 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BI317_20825 SM00331 Sigma factor PP2C-like phosphatases BI317_20845 SM00345 helix_turn_helix gluconate operon transcriptional repressor BI317_20845 SM00895 BI317_20845 BI317_20855 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BI317_20905 SM00867 YceI-like domain BI317_20960 SM00965 Secretin and TonB N terminus short domain BI317_21050 SM00883 Chaperonin 10 Kd subunit BI317_21085 SM00878 Biotin carboxylase C-terminal domain BI317_21110 SM00530 Helix-turn-helix XRE-family like proteins BI317_21160 SM00798 AICARFT/IMPCHase bienzyme BI317_21160 SM00851 MGS-like domain BI317_21165 SM01209 BI317_21165 BI317_21165 SM01210 BI317_21165 BI317_21180 SM00563 Phosphate acyltransferases BI317_21230 SM00052 Putative diguanylate phosphodiesterase BI317_21230 SM00267 diguanylate cyclase BI317_21230 SM00448 cheY-homologous receiver domain BI317_21235 SM00073 Histidine Phosphotransfer domain BI317_21235 SM00387 Histidine kinase-like ATPases BI317_21235 SM00388 His Kinase A (phosphoacceptor) domain BI317_21235 SM00448 cheY-homologous receiver domain BI317_21290 SM00100 Cyclic nucleotide-monophosphate binding domain BI317_21290 SM00419 helix_turn_helix, cAMP Regulatory protein BI317_21310 SM00903 Flavin reductase like domain BI317_21320 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BI317_21320 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BI317_21400 SM00382 ATPases associated with a variety of cellular activities BI317_21555 SM00046 Diacylglycerol kinase catalytic domain (presumed) BI317_21575 SM00271 DnaJ molecular chaperone homology domain BI317_21695 SM00347 helix_turn_helix multiple antibiotic resistance protein BI317_21725 SM00861 Transketolase, pyrimidine binding domain BI317_21745 SM00487 DEAD-like helicases superfamily BI317_21745 SM00490 helicase superfamily c-terminal domain BI317_21805 SM00642 Alpha-amylase domain BI317_21815 SM00642 Alpha-amylase domain BI317_21825 SM00642 Alpha-amylase domain BI317_21830 SM00642 Alpha-amylase domain BI317_21840 SM00267 diguanylate cyclase BI317_21880 SM00318 Staphylococcal nuclease homologues BI317_21935 SM00729 Elongator protein 3, MiaB family, Radical SAM BI317_21935 SM00876 Biotin and Thiamin Synthesis associated domain BI317_21990 SM01228 BI317_21990 BI317_22005 SM00090 RIO-like kinase BI317_22010 SM00346 helix_turn_helix isocitrate lyase regulation BI317_22030 SM00998 Adenylosuccinate lyase C-terminus BI317_22050 SM00882 Coenzyme A transferase BI317_22055 SM00882 Coenzyme A transferase BI317_22065 SM00345 helix_turn_helix gluconate operon transcriptional repressor BI317_22065 SM00895 BI317_22065 BI317_22075 SM00420 helix_turn_helix, Deoxyribose operon repressor BI317_22075 SM01134 BI317_22075 BI317_22105 SM00342 helix_turn_helix, arabinose operon control protein BI317_22130 SM00347 helix_turn_helix multiple antibiotic resistance protein BI317_22135 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BI317_22235 SM01126 BI317_22235 BI317_22465 SM01126 BI317_22465 BI317_22490 SM00382 ATPases associated with a variety of cellular activities BI317_22815 SM00342 helix_turn_helix, arabinose operon control protein BI317_22850 SM00477 DNA/RNA non-specific endonuclease BI317_22850 SM00892 DNA/RNA non-specific endonuclease BI317_22875 SM00631 BI317_22875 BI317_22880 SM00382 ATPases associated with a variety of cellular activities BI317_22960 SM00382 ATPases associated with a variety of cellular activities BI317_23015 SM00382 ATPases associated with a variety of cellular activities BI317_23015 SM00448 cheY-homologous receiver domain BI317_23025 SM00448 cheY-homologous receiver domain BI317_23030 SM00091 PAS domain BI317_23030 SM00138 Methyltransferase, chemotaxis proteins BI317_23030 SM00911 HWE histidine kinase BI317_23070 SM00387 Histidine kinase-like ATPases BI317_23075 SM00448 cheY-homologous receiver domain BI317_23075 SM00850 LytTr DNA-binding domain BI317_23145 SM00729 Elongator protein 3, MiaB family, Radical SAM BI317_23155 SM00986 Uracil DNA glycosylase superfamily BI317_23155 SM00987 UreE urease accessory protein, C-terminal domain BI317_23160 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. BI317_23180 SM00382 ATPases associated with a variety of cellular activities BI317_23190 SM01126 BI317_23190 BI317_23275 SM00095 Transthyretin BI317_23290 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BI317_23290 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BI317_23295 SM00487 DEAD-like helicases superfamily BI317_23295 SM00490 helicase superfamily c-terminal domain BI317_23295 SM00847 Helicase associated domain (HA2) Add an annotation BI317_23325 SM00829 Enoylreductase BI317_23360 SM00347 helix_turn_helix multiple antibiotic resistance protein BI317_23400 SM00833 Cobalamin synthesis protein cobW C-terminal domain BI317_23440 SM00953 BI317_23440 BI317_23465 SM00878 Biotin carboxylase C-terminal domain BI317_23490 SM00100 Cyclic nucleotide-monophosphate binding domain BI317_23490 SM00267 diguanylate cyclase BI317_23535 SM00563 Phosphate acyltransferases BI317_23590 SM00028 Tetratricopeptide repeats BI317_23590 SM00862 Transcriptional regulatory protein, C terminal BI317_23650 SM00382 ATPases associated with a variety of cellular activities BI317_23650 SM00448 cheY-homologous receiver domain BI317_23655 SM00387 Histidine kinase-like ATPases BI317_23655 SM00388 His Kinase A (phosphoacceptor) domain BI317_23680 SM00450 Rhodanese Homology Domain BI317_23740 SM00382 ATPases associated with a variety of cellular activities BI317_23740 SM00448 cheY-homologous receiver domain BI317_23745 SM00387 Histidine kinase-like ATPases BI317_23745 SM00388 His Kinase A (phosphoacceptor) domain BI317_23755 SM00938 Nitrogen regulatory protein P-II BI317_23760 SM01230 BI317_23760 BI317_23780 SM00028 Tetratricopeptide repeats BI317_23795 SM00563 Phosphate acyltransferases BI317_23810 SM00155 Phospholipase D. Active site motifs. BI317_23815 SM00867 YceI-like domain BI317_23820 SM00855 Phosphoglycerate mutase family BI317_23850 SM00530 Helix-turn-helix XRE-family like proteins BI317_23880 SM00382 ATPases associated with a variety of cellular activities BI317_23895 SM00382 ATPases associated with a variety of cellular activities BI317_23910 SM00344 helix_turn_helix ASNC type BI317_23925 SM00530 Helix-turn-helix XRE-family like proteins BI317_23960 SM00354 helix_turn _helix lactose operon repressor BI317_24030 SM00642 Alpha-amylase domain BI317_24035 SM00642 Alpha-amylase domain BI317_24040 SM00642 Alpha-amylase domain BI317_24180 SM00342 helix_turn_helix, arabinose operon control protein BI317_24190 SM00530 Helix-turn-helix XRE-family like proteins BI317_24410 SM00422 helix_turn_helix, mercury resistance BI317_24460 SM00226 Low molecular weight phosphatase family BI317_24465 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BI317_24490 SM00530 Helix-turn-helix XRE-family like proteins BI317_24540 SM00746 metallochaperone-like domain BI317_24795 SM00470 ParB-like nuclease domain BI317_24980 SM00491 BI317_24980 BI317_25000 SM00448 cheY-homologous receiver domain BI317_25045 SM00047 Lysozyme subfamily 2 BI317_25080 SM00318 Staphylococcal nuclease homologues BI317_25100 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BI317_25115 SM00487 DEAD-like helicases superfamily BI317_25115 SM00490 helicase superfamily c-terminal domain BI317_25130 SM00480 DNA polymerase III beta subunit BI317_25135 SM00470 ParB-like nuclease domain BI317_25200 SM00487 DEAD-like helicases superfamily BI317_25200 SM00490 helicase superfamily c-terminal domain BI317_25205 SM00671 Sel1-like repeats. BI317_25210 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BI317_25375 SM00857 Resolvase, N terminal domain BI317_25380 SM00966 SpoVT / AbrB like domain BI317_25515 SM00965 Secretin and TonB N terminus short domain BI317_25535 SM00470 ParB-like nuclease domain BI317_25605 SM01301 BI317_25605 BI317_25675 SM00857 Resolvase, N terminal domain BI317_25855 SM00530 Helix-turn-helix XRE-family like proteins BI317_25865 SM00530 Helix-turn-helix XRE-family like proteins BI317_25955 SM00966 SpoVT / AbrB like domain