locus-tag	class	description
XJ27_00015	COG0477	Major facilitator Superfamily
XJ27_00025	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
XJ27_00035	COG2986	histidine ammonia-lyase
XJ27_00040	COG1228	amidohydrolase
XJ27_00075	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
XJ27_00080	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
XJ27_00085	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
XJ27_00095	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
XJ27_00110	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
XJ27_00115	COG3293	Transposase
XJ27_00125	COG0583	DNA-binding transcription factor activity
XJ27_00190	COG2003	Belongs to the UPF0758 family
XJ27_00210	COG2189	Belongs to the N(4) N(6)-methyltransferase family
XJ27_00245	COG2801	Transposase and inactivated derivatives
XJ27_00250	COG2963	transposase activity
XJ27_00260	COG3039	Transposase
XJ27_00320	COG0840	transmembrane signaling receptor activity
XJ27_00340	COG5002	protein histidine kinase activity
XJ27_00340	COG2205	protein histidine kinase activity
XJ27_00340	COG0784	Response regulator, receiver
XJ27_00345	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
XJ27_00350	COG4191	Histidine kinase
XJ27_00350	COG0784	Response regulator, receiver
XJ27_00355	COG3039	Transposase
XJ27_00365	COG2879	small protein
XJ27_00370	COG1966	Carbon starvation protein
XJ27_00375	COG1741	Belongs to the pirin family
XJ27_00390	COG1741	Belongs to the pirin family
XJ27_00395	COG1515	deoxyribonuclease V activity
XJ27_00410	COG3590	peptidase
XJ27_00415	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
XJ27_00425	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
XJ27_00435	COG0835	chemotaxis
XJ27_00440	COG0840	transmembrane signaling receptor activity
XJ27_00445	COG0643	Histidine kinase
XJ27_00445	COG2198	Histidine kinase
XJ27_00455	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
XJ27_00465	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
XJ27_00470	COG0745	RESPONSE REGULATOR receiver
XJ27_00475	COG2205	protein histidine kinase activity
XJ27_00485	COG4452	Inner membrane protein CreD
XJ27_00510	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
XJ27_00515	COG0735	belongs to the Fur family
XJ27_00530	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
XJ27_00535	COG1538	Outer membrane efflux protein
XJ27_00540	COG1309	transcriptional regulator
XJ27_00545	COG0667	Aldo Keto reductase
XJ27_00570	COG0583	DNA-binding transcription factor activity
XJ27_00575	COG2814	Major facilitator Superfamily
XJ27_00580	COG0667	Aldo Keto reductase
XJ27_00585	COG1404	Belongs to the peptidase S8 family
XJ27_00595	COG1404	Belongs to the peptidase S8 family
XJ27_00670	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
XJ27_00690	COG1595	DNA-templated transcription, initiation
XJ27_00700	COG5002	protein histidine kinase activity
XJ27_00700	COG5001	Diguanylate cyclase
XJ27_00705	COG1187	pseudouridine synthase activity
XJ27_00710	COG3706	GGDEF domain
XJ27_00710	COG0745	RESPONSE REGULATOR receiver
XJ27_00725	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
XJ27_00730	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
XJ27_00735	COG0475	glutathione-regulated potassium exporter activity
XJ27_00745	COG1132	(ABC) transporter
XJ27_00785	COG2155	Conserved Protein
XJ27_00795	COG0583	DNA-binding transcription factor activity
XJ27_00805	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
XJ27_00825	COG3706	GGDEF domain
XJ27_00835	COG3706	GGDEF domain
XJ27_00890	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
XJ27_00905	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
XJ27_00915	COG0497	DNA recombination
XJ27_00920	COG1420	regulation of RNA biosynthetic process
XJ27_00925	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
XJ27_00940	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
XJ27_00965	COG2274	protein secretion by the type I secretion system
XJ27_00970	COG0583	DNA-binding transcription factor activity
XJ27_00975	COG1132	(ABC) transporter
XJ27_01010	COG2850	peptidyl-arginine hydroxylation
XJ27_01030	COG1253	flavin adenine dinucleotide binding
XJ27_01060	COG1131	(ABC) transporter
XJ27_01065	COG1725	Transcriptional regulator
XJ27_01070	COG0386	Belongs to the glutathione peroxidase family
XJ27_01110	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
XJ27_01125	COG1410	methionine synthase
XJ27_01125	COG0646	methionine synthase
XJ27_01140	COG1960	acyl-CoA dehydrogenase activity
XJ27_01145	COG3039	Transposase
XJ27_01160	COG0557	exoribonuclease II activity
XJ27_01170	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
XJ27_01175	COG3706	GGDEF domain
XJ27_01180	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
XJ27_01190	COG0704	Plays a role in the regulation of phosphate uptake
XJ27_01195	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
XJ27_01200	COG0581	inorganic phosphate transmembrane transporter activity
XJ27_01205	COG0573	inorganic phosphate transmembrane transporter activity
XJ27_01210	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
XJ27_01235	COG0659	secondary active sulfate transmembrane transporter activity
XJ27_01240	COG3293	Transposase
XJ27_01250	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
XJ27_01260	COG1024	Enoyl-CoA hydratase
XJ27_01315	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
XJ27_01340	COG2925	Exonuclease
XJ27_01345	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
XJ27_01365	COG0288	reversible hydration of carbon dioxide
XJ27_01370	COG2808	Putative FMN-binding domain
XJ27_01385	COG0017	Asparaginyl-tRNA synthetase
XJ27_01390	COG0316	Belongs to the HesB IscA family
XJ27_01415	COG3115	cell septum assembly
XJ27_01420	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
XJ27_01425	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
XJ27_01430	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
XJ27_01440	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
XJ27_01465	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
XJ27_01470	COG3178	'Phosphotransferase
XJ27_01480	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
XJ27_01485	COG1555	photosystem II stabilization
XJ27_01495	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
XJ27_01500	COG1477	protein flavinylation
XJ27_01525	COG3128	pkhd-type hydroxylase
XJ27_01530	COG4774	siderophore transport
XJ27_01540	COG0456	acetyltransferase
XJ27_01545	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
XJ27_01550	COG0719	Fe-S assembly protein
XJ27_01555	COG0396	ATPase activity
XJ27_01560	COG0719	Fe-S assembly protein
XJ27_01565	COG1959	2 iron, 2 sulfur cluster binding
XJ27_01590	COG4942	peptidase
XJ27_01605	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
XJ27_01625	COG0519	Catalyzes the synthesis of GMP from XMP
XJ27_01630	COG1678	Uncharacterized ACR, COG1678
XJ27_01635	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
XJ27_01645	COG1764	response to oxidative stress
XJ27_01655	COG0384	phenazine biosynthesis protein PhzF
XJ27_01660	COG0384	phenazine biosynthesis protein PhzF
XJ27_01665	COG0527	aspartate kinase activity
XJ27_01685	COG0142	geranyltranstransferase activity
XJ27_01690	COG0629	single-stranded DNA binding
XJ27_01705	COG2203	Gaf domain
XJ27_01705	COG3706	GGDEF domain
XJ27_01705	COG4251	negative regulation of phosphorylation
XJ27_01705	COG5001	Diguanylate cyclase
XJ27_01710	COG2080	2 iron, 2 sulfur cluster binding
XJ27_01715	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
XJ27_01720	COG1529	Aldehyde oxidase and xanthine dehydrogenase
XJ27_01725	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
XJ27_01755	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
XJ27_01790	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
XJ27_01800	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
XJ27_01810	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
XJ27_01860	COG2244	polysaccharide biosynthetic process
XJ27_01890	COG2264	protein methyltransferase activity
XJ27_01895	COG0297	glycogen (starch) synthase activity
XJ27_01900	COG0438	transferase activity, transferring glycosyl groups
XJ27_01920	COG1132	(ABC) transporter
XJ27_01935	COG0477	Major facilitator Superfamily
XJ27_01940	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
XJ27_01955	COG1253	flavin adenine dinucleotide binding
XJ27_01990	COG0504	CTP synthase activity
XJ27_02005	COG0148	phosphopyruvate hydratase activity
XJ27_02030	COG2840	Smr protein MutS2
XJ27_02035	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
XJ27_02040	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
XJ27_02045	COG1238	metal cluster binding
XJ27_02060	COG1534	Rna-binding protein
XJ27_02065	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
XJ27_02070	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
XJ27_02075	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
XJ27_02080	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
XJ27_02085	COG1923	regulation of RNA biosynthetic process
XJ27_02090	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
XJ27_02095	COG1546	Belongs to the CinA family
XJ27_02100	COG4771	TonB-dependent receptor
XJ27_02105	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
XJ27_02120	COG2137	regulation of response to DNA damage stimulus
XJ27_02125	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
XJ27_02130	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
XJ27_02145	COG1741	Belongs to the pirin family
XJ27_02170	COG0352	thiamine-phosphate diphosphorylase activity
XJ27_02170	COG0351	phosphomethylpyrimidine kinase
XJ27_02185	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
XJ27_02190	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
XJ27_02205	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
XJ27_02215	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
XJ27_02235	COG0800	Aldolase
XJ27_02270	COG1501	Belongs to the glycosyl hydrolase 31 family
XJ27_02280	COG1070	Carbohydrate kinase
XJ27_02285	COG2115	Belongs to the xylose isomerase family
XJ27_02290	COG0477	Major facilitator Superfamily
XJ27_02310	COG0860	N-Acetylmuramoyl-L-alanine amidase
XJ27_02330	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
XJ27_02335	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
XJ27_02340	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
XJ27_02345	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
XJ27_02370	COG1472	Belongs to the glycosyl hydrolase 3 family
XJ27_02380	COG2203	Gaf domain
XJ27_02380	COG4251	negative regulation of phosphorylation
XJ27_02380	COG3706	GGDEF domain
XJ27_02380	COG5001	Diguanylate cyclase
XJ27_02385	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
XJ27_02390	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
XJ27_02400	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
XJ27_02405	COG0671	phosphoesterase, PA-phosphatase related
XJ27_02415	COG0697	spore germination
XJ27_02420	COG0812	UDP-N-acetylmuramate dehydrogenase activity
XJ27_02425	COG0167	dihydroorotate dehydrogenase activity
XJ27_02440	COG1012	belongs to the aldehyde dehydrogenase family
XJ27_02490	COG0210	DNA helicase
XJ27_02525	COG2963	transposase activity
XJ27_02530	COG2801	Transposase and inactivated derivatives
XJ27_02540	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
XJ27_02540	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
XJ27_02560	COG2963	transposase activity
XJ27_02565	COG2801	Transposase and inactivated derivatives
XJ27_02575	COG1215	transferase activity, transferring glycosyl groups
XJ27_02580	COG0726	polysaccharide deacetylase
XJ27_02580	COG1649	PFAM Uncharacterised BCR, COG1649
XJ27_02605	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
XJ27_02610	COG0460	homoserine dehydrogenase
XJ27_02610	COG0527	aspartate kinase activity
XJ27_02635	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
XJ27_02660	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
XJ27_02665	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
XJ27_02685	COG0107	imidazoleglycerol-phosphate synthase activity
XJ27_02690	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
XJ27_02690	COG0140	phosphoribosyl-ATP diphosphatase activity
XJ27_02710	COG4229	Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene)
XJ27_02735	COG0531	amino acid
XJ27_02740	COG0531	amino acid
XJ27_02755	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
XJ27_02760	COG0277	FAD linked oxidase domain protein
XJ27_02780	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
XJ27_02795	COG1024	Enoyl-CoA hydratase
XJ27_02815	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
XJ27_02820	COG2258	MOSC domain
XJ27_02830	COG0505	Belongs to the CarA family
XJ27_02840	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
XJ27_02845	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
XJ27_02855	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
XJ27_02875	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
XJ27_02880	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
XJ27_02895	COG2205	protein histidine kinase activity
XJ27_02895	COG0784	Response regulator, receiver
XJ27_02895	COG2198	Histidine kinase
XJ27_02905	COG0318	PFAM AMP-dependent synthetase and ligase
XJ27_02935	COG2267	carboxylic ester hydrolase activity
XJ27_02950	COG2201	protein-glutamate methylesterase activity
XJ27_02965	COG0840	transmembrane signaling receptor activity
XJ27_02975	COG0835	chemotaxis
XJ27_02985	COG0840	transmembrane signaling receptor activity
XJ27_02990	COG0840	transmembrane signaling receptor activity
XJ27_02995	COG0840	transmembrane signaling receptor activity
XJ27_03000	COG0840	transmembrane signaling receptor activity
XJ27_03005	COG0840	transmembrane signaling receptor activity
XJ27_03010	COG0840	transmembrane signaling receptor activity
XJ27_03015	COG0840	transmembrane signaling receptor activity
XJ27_03020	COG0840	transmembrane signaling receptor activity
XJ27_03020	COG0840	transmembrane signaling receptor activity
XJ27_03035	COG0643	Histidine kinase
XJ27_03035	COG2198	Histidine kinase
XJ27_03040	COG0745	RESPONSE REGULATOR receiver
XJ27_03050	COG0835	chemotaxis
XJ27_03055	COG1192	Involved in chromosome partitioning
XJ27_03065	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
XJ27_03080	COG0643	Histidine kinase
XJ27_03080	COG2198	Histidine kinase
XJ27_03100	COG0455	bacterial-type flagellum organization
XJ27_03130	COG3300	MHYT domain
XJ27_03130	COG5001	Diguanylate cyclase
XJ27_03140	COG1987	bacterial-type flagellum assembly
XJ27_03200	COG1677	Flagellar hook-basal body complex protein FliE
XJ27_03235	COG1028	Short-chain dehydrogenase reductase Sdr
XJ27_03240	COG1028	Short-chain dehydrogenase reductase Sdr
XJ27_03245	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
XJ27_03265	COG2201	protein-glutamate methylesterase activity
XJ27_03295	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
XJ27_03300	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
XJ27_03315	COG3951	Flagellar rod assembly protein muramidase FlgJ
XJ27_03315	COG1705	Flagellar rod assembly protein muramidase FlgJ
XJ27_03330	COG4786	Flagellar basal body rod
XJ27_03335	COG4787	bacterial-type flagellum-dependent cell motility
XJ27_03340	COG1749	Flagellar hook protein flgE
XJ27_03345	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
XJ27_03350	COG1558	bacterial-type flagellum-dependent cell motility
XJ27_03360	COG0835	chemotaxis
XJ27_03360	COG0784	Response regulator, receiver
XJ27_03380	COG4191	Histidine kinase
XJ27_03405	COG3293	Transposase
XJ27_03430	COG2915	High frequency lysogenization protein hflD homolog
XJ27_03435	COG0482	sulfurtransferase activity
XJ27_03445	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
XJ27_03450	COG0542	response to heat
XJ27_03455	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
XJ27_03460	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
XJ27_03470	COG0492	ferredoxin-NADP+ reductase activity
XJ27_03475	COG1674	ftsk spoiiie
XJ27_03490	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
XJ27_03495	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
XJ27_03500	COG0183	Belongs to the thiolase family
XJ27_03505	COG1024	Enoyl-CoA hydratase
XJ27_03505	COG1250	3-hydroxyacyl-CoA dehydrogenase
XJ27_03515	COG0105	UTP biosynthetic process
XJ27_03520	COG0820	rRNA (adenine-C2-)-methyltransferase activity
XJ27_03540	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
XJ27_03545	COG1160	GTP binding
XJ27_03550	COG0303	'Molybdopterin
XJ27_03555	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
XJ27_03565	COG0708	Exodeoxyribonuclease III
XJ27_03575	COG0303	'Molybdopterin
XJ27_03580	COG0746	molybdenum cofactor guanylyltransferase activity
XJ27_03590	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
XJ27_03590	COG1648	precorrin-2 dehydrogenase activity
XJ27_03600	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
XJ27_03605	COG2223	nitrite transmembrane transporter activity
XJ27_03610	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
XJ27_03620	COG0243	molybdopterin cofactor binding
XJ27_03640	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
XJ27_03650	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
XJ27_03660	COG0579	oxidoreductase
XJ27_03670	COG3685	Protein conserved in bacteria
XJ27_03685	COG5001	Diguanylate cyclase
XJ27_03725	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
XJ27_03755	COG4191	Histidine kinase
XJ27_03755	COG0784	Response regulator, receiver
XJ27_03760	COG2205	protein histidine kinase activity
XJ27_03790	COG3781	membrane
XJ27_03795	COG4191	Histidine kinase
XJ27_03800	COG2197	response regulator
XJ27_03835	COG2801	Transposase and inactivated derivatives
XJ27_03840	COG2963	transposase activity
XJ27_03985	COG2154	pterin-4-alpha-carbinolamine dehydratase
XJ27_03995	COG0428	transporter
XJ27_04005	COG3039	Transposase
XJ27_04035	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
XJ27_04040	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
XJ27_04070	COG1530	ribonuclease E activity
XJ27_04100	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
XJ27_04155	COG1192	Involved in chromosome partitioning
XJ27_04190	COG0629	single-stranded DNA binding
XJ27_04195	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
XJ27_04200	COG0270	DNA (cytosine-5-)-methyltransferase activity
XJ27_04395	COG0583	DNA-binding transcription factor activity
XJ27_04400	COG0477	Major facilitator Superfamily
XJ27_04415	COG3039	Transposase
XJ27_04420	COG3039	Transposase
XJ27_04425	COG2963	transposase activity
XJ27_04430	COG2801	Transposase and inactivated derivatives
XJ27_04465	COG3830	Belongs to the UPF0237 family
XJ27_04465	COG0560	Phosphoserine phosphatase
XJ27_04475	COG4221	oxidoreductase activity
XJ27_04480	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
XJ27_04485	COG1028	Short-chain dehydrogenase reductase Sdr
XJ27_04490	COG0583	DNA-binding transcription factor activity
XJ27_04530	COG2801	Transposase and inactivated derivatives
XJ27_04535	COG2963	transposase activity
XJ27_04620	COG0583	DNA-binding transcription factor activity
XJ27_04625	COG1396	sequence-specific DNA binding
XJ27_04635	COG0582	viral genome integration into host DNA
XJ27_04660	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
XJ27_04665	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
XJ27_04670	COG1663	tetraacyldisaccharide 4'-kinase activity
XJ27_04675	COG1132	(ABC) transporter
XJ27_04685	COG0811	peptide transport
XJ27_04700	COG1136	(ABC) transporter
XJ27_04705	COG4591	ABC-type transport system involved in lipoprotein release permease component
XJ27_04715	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
XJ27_04720	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
XJ27_04735	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
XJ27_04740	COG2009	succinate dehydrogenase
XJ27_04745	COG0354	folic acid binding
XJ27_04755	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
XJ27_04760	COG0837	glucose binding
XJ27_04765	COG0363	glucosamine-6-phosphate deaminase activity
XJ27_04770	COG0129	dihydroxy-acid dehydratase activity
XJ27_04775	COG0800	Aldolase
XJ27_04860	COG0582	viral genome integration into host DNA
XJ27_04875	COG5002	protein histidine kinase activity
XJ27_04875	COG2205	protein histidine kinase activity
XJ27_04875	COG0784	Response regulator, receiver
XJ27_04880	COG2183	response to ionizing radiation
XJ27_04905	COG3243	poly(R)-hydroxyalkanoic acid synthase
XJ27_04915	COG1183	phosphatidylcholine synthase activity
XJ27_04920	COG1028	Short-chain dehydrogenase reductase Sdr
XJ27_04945	COG0668	transmembrane transport
XJ27_04950	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
XJ27_04955	COG0590	tRNA wobble adenosine to inosine editing
XJ27_04960	COG1321	iron dependent repressor
XJ27_04965	COG1914	H( )-stimulated, divalent metal cation uptake system
XJ27_04985	COG2801	Transposase and inactivated derivatives
XJ27_04995	COG3039	Transposase
XJ27_05035	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
XJ27_05045	COG0475	glutathione-regulated potassium exporter activity
XJ27_05045	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
XJ27_05050	COG1210	Utp--glucose-1-phosphate uridylyltransferase
XJ27_05060	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
XJ27_05065	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
XJ27_05075	COG0776	regulation of translation
XJ27_05085	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
XJ27_05090	COG0257	Belongs to the bacterial ribosomal protein bL36 family
XJ27_05100	COG2957	Belongs to the agmatine deiminase family
XJ27_05105	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
XJ27_05130	COG0395	ABC-type sugar transport system, permease component
XJ27_05135	COG1175	transmembrane transport
XJ27_05140	COG1653	transport
XJ27_05165	COG2350	Protein conserved in bacteria
XJ27_05170	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
XJ27_05175	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
XJ27_05180	COG1187	pseudouridine synthase activity
XJ27_05195	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
XJ27_05200	COG0436	Aminotransferase
XJ27_05225	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
XJ27_05265	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
XJ27_05270	COG4988	ABC transporter
XJ27_05280	COG1294	oxidase, subunit
XJ27_05315	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
XJ27_05345	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
XJ27_05355	COG0137	argininosuccinate synthase activity
XJ27_05360	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
XJ27_05370	COG0215	cysteine-tRNA ligase activity
XJ27_05375	COG2166	iron-sulfur cluster assembly
XJ27_05385	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
XJ27_05395	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
XJ27_05410	COG4303	Ethanolamine ammonia lyase large subunit
XJ27_05415	COG4302	ethanolamine ammonia-lyase activity
XJ27_05470	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
XJ27_05475	COG0402	S-adenosylhomocysteine deaminase activity
XJ27_05490	COG1509	lysine 2,3-aminomutase activity
XJ27_05495	COG3300	MHYT domain
XJ27_05495	COG5001	Diguanylate cyclase
XJ27_05510	COG0483	inositol monophosphate 1-phosphatase activity
XJ27_05535	COG0628	permease
XJ27_05550	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
XJ27_05570	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
XJ27_05575	COG0271	Belongs to the BolA IbaG family
XJ27_05585	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
XJ27_05595	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
XJ27_05600	COG1137	ATPase activity
XJ27_05615	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
XJ27_05635	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
XJ27_05640	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
XJ27_05645	COG2239	Acts as a magnesium transporter
XJ27_05655	COG1294	oxidase, subunit
XJ27_05660	COG1271	oxidase subunit
XJ27_05670	COG1113	amino acid transport
XJ27_05685	COG2197	response regulator
XJ27_05690	COG0531	amino acid
XJ27_05745	COG2814	Major facilitator Superfamily
XJ27_05750	COG0754	glutathionylspermidine amidase activity
XJ27_05775	COG1842	Phage shock protein A
XJ27_05790	COG0259	pyridoxamine-phosphate oxidase activity
XJ27_05795	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
XJ27_05800	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
XJ27_05810	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
XJ27_05820	COG0513	Belongs to the DEAD box helicase family
XJ27_05825	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
XJ27_05830	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
XJ27_05840	COG0625	glutathione transferase activity
XJ27_05855	COG4681	YaeQ
XJ27_05860	COG2081	HI0933 family
XJ27_05865	COG3300	MHYT domain
XJ27_05865	COG5001	Diguanylate cyclase
XJ27_05870	COG0501	Belongs to the peptidase M48B family
XJ27_05875	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
XJ27_05880	COG1028	Short-chain dehydrogenase reductase Sdr
XJ27_05900	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
XJ27_05905	COG0860	N-Acetylmuramoyl-L-alanine amidase
XJ27_05915	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
XJ27_05915	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
XJ27_05920	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
XJ27_05935	COG1262	PFAM Formylglycine-generating sulfatase enzyme
XJ27_05955	COG2199	diguanylate cyclase activity
XJ27_05960	COG0835	chemotaxis
XJ27_05965	COG0840	transmembrane signaling receptor activity
XJ27_05975	COG1201	RNA secondary structure unwinding
XJ27_05985	COG2969	positive regulation of protein catabolic process
XJ27_05990	COG0625	glutathione transferase activity
XJ27_05995	COG2857	Cytochrome c1
XJ27_06000	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
XJ27_06005	COG0723	plastoquinol--plastocyanin reductase activity
XJ27_06010	COG0741	lytic transglycosylase activity
XJ27_06025	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
XJ27_06030	COG1702	phosphate starvation-inducible protein PhoH
XJ27_06050	COG4535	Mg2 and Co2 transporter CorC
XJ27_06070	COG1012	belongs to the aldehyde dehydrogenase family
XJ27_06080	COG1177	transmembrane transport
XJ27_06085	COG1176	ABC-type spermidine putrescine transport system, permease component I
XJ27_06095	COG3842	ATPase activity
XJ27_06130	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
XJ27_06135	COG0174	glutamine synthetase
XJ27_06140	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
XJ27_06145	COG0745	RESPONSE REGULATOR receiver
XJ27_06145	COG3706	GGDEF domain
XJ27_06160	COG0243	molybdopterin cofactor binding
XJ27_06185	COG2733	membrane
XJ27_06190	COG2205	protein histidine kinase activity
XJ27_06190	COG0784	Response regulator, receiver
XJ27_06190	COG5002	protein histidine kinase activity
XJ27_06200	COG0477	Major facilitator Superfamily
XJ27_06210	COG0604	alcohol dehydrogenase
XJ27_06215	COG0300	oxidoreductase activity
XJ27_06225	COG3293	Transposase
XJ27_06235	COG1902	pentaerythritol trinitrate reductase activity
XJ27_06245	COG1064	alcohol dehydrogenase
XJ27_06280	COG2902	Dehydrogenase
XJ27_06290	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
XJ27_06295	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
XJ27_06300	COG1609	Transcriptional regulator
XJ27_06305	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
XJ27_06305	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
XJ27_06310	COG1105	Belongs to the carbohydrate kinase PfkB family
XJ27_06315	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
XJ27_06315	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
XJ27_06335	COG2801	Transposase and inactivated derivatives
XJ27_06340	COG2963	transposase activity
XJ27_06355	COG3293	Transposase
XJ27_06360	COG2963	transposase activity
XJ27_06385	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
XJ27_06395	COG1862	Preprotein translocase
XJ27_06405	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
XJ27_06445	COG3291	Pkd domain containing protein
XJ27_06455	COG0405	Gamma-glutamyltransferase
XJ27_06460	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
XJ27_06480	COG0742	ribosomal rna small subunit methyltransferase
XJ27_06490	COG2963	transposase activity
XJ27_06495	COG2801	Transposase and inactivated derivatives
XJ27_06580	COG0531	amino acid
XJ27_06595	COG0006	proline dipeptidase activity
XJ27_06605	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
XJ27_06620	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
XJ27_06625	COG3938	Belongs to the proline racemase family
XJ27_06635	COG0552	protein localization to endoplasmic reticulum
XJ27_06640	COG1194	a g-specific adenine glycosylase
XJ27_06665	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
XJ27_06685	COG3040	lipid binding
XJ27_06695	COG1960	acyl-CoA dehydrogenase activity
XJ27_06705	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
XJ27_06725	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
XJ27_06730	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
XJ27_06735	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
XJ27_06770	COG0438	transferase activity, transferring glycosyl groups
XJ27_06775	COG0438	transferase activity, transferring glycosyl groups
XJ27_06820	COG0776	regulation of translation
XJ27_06825	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
XJ27_06825	COG0072	phenylalanine-tRNA ligase activity
XJ27_06830	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
XJ27_06840	COG0291	Belongs to the bacterial ribosomal protein bL35 family
XJ27_06845	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
XJ27_06850	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
XJ27_06855	COG2963	transposase activity
XJ27_06860	COG2801	Transposase and inactivated derivatives
XJ27_06895	COG3702	type iv secretory pathway
XJ27_06915	COG2948	multi-organism process
XJ27_06935	COG3505	Type IV secretory pathway VirD4
XJ27_06950	COG0556	nucleotide-excision repair
XJ27_06995	COG1611	Belongs to the LOG family
XJ27_07005	COG2095	MarC family integral membrane protein
XJ27_07010	COG1028	Short-chain dehydrogenase reductase Sdr
XJ27_07015	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
XJ27_07020	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
XJ27_07055	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
XJ27_07060	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
XJ27_07065	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
XJ27_07075	COG0195	Participates in both transcription termination and antitermination
XJ27_07080	COG0779	Required for maturation of 30S ribosomal subunits
XJ27_07090	COG1007	ATP synthesis coupled electron transport
XJ27_07105	COG0713	ATP synthesis coupled electron transport
XJ27_07110	COG0839	Belongs to the complex I subunit 6 family
XJ27_07120	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
XJ27_07130	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
XJ27_07135	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
XJ27_07145	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
XJ27_07155	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
XJ27_07175	COG4221	oxidoreductase activity
XJ27_07210	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
XJ27_07230	COG0133	tryptophan synthase activity
XJ27_07240	COG0135	phosphoribosylanthranilate isomerase activity
XJ27_07260	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
XJ27_07265	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
XJ27_07280	COG2890	protein-(glutamine-N5) methyltransferase activity
XJ27_07290	COG0688	phosphatidylethanolamine metabolic process
XJ27_07300	COG0433	COG0433 Predicted ATPase
XJ27_07305	COG0494	nUDIX hydrolase
XJ27_07320	COG2963	transposase activity
XJ27_07325	COG2801	Transposase and inactivated derivatives
XJ27_07350	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
XJ27_07380	COG0717	Belongs to the dCTP deaminase family
XJ27_07385	COG0489	protein tyrosine kinase activity
XJ27_07410	COG3590	peptidase
XJ27_07435	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
XJ27_07440	COG2311	Membrane
XJ27_07445	COG1047	Peptidyl-prolyl cis-trans
XJ27_07450	COG0791	NLP P60 protein
XJ27_07455	COG0791	NLP P60 protein
XJ27_07470	COG1301	dicarboxylic acid transport
XJ27_07475	COG1785	Belongs to the alkaline phosphatase family
XJ27_07480	COG0037	tRNA processing
XJ27_07485	COG1722	exodeoxyribonuclease VII activity
XJ27_07490	COG0142	geranyltranstransferase activity
XJ27_07495	COG4104	PAAR repeat-containing protein
XJ27_07505	COG0312	modulator of DNA gyrase
XJ27_07515	COG0312	modulator of DNA gyrase
XJ27_07525	COG3164	Protein of unknown function
XJ27_07530	COG1530	ribonuclease E activity
XJ27_07550	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
XJ27_07570	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
XJ27_07585	COG0495	leucyl-tRNA aminoacylation
XJ27_07595	COG3118	belongs to the thioredoxin family
XJ27_07605	COG0415	Belongs to the DNA photolyase family
XJ27_07610	COG0305	Participates in initiation and elongation during chromosome replication
XJ27_07620	COG0367	asparagine synthase
XJ27_07635	COG1960	acyl-CoA dehydrogenase activity
XJ27_07650	COG0084	hydrolase, TatD family'
XJ27_07655	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
XJ27_07690	COG0288	reversible hydration of carbon dioxide
XJ27_07720	COG0386	Belongs to the glutathione peroxidase family
XJ27_07725	COG0339	signal peptide processing
XJ27_07780	COG2814	Major facilitator Superfamily
XJ27_07785	COG1566	PFAM secretion protein HlyD family protein
XJ27_07825	COG4774	siderophore transport
XJ27_07835	COG0367	asparagine synthase
XJ27_07840	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
XJ27_07845	COG1393	Belongs to the ArsC family
XJ27_07860	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
XJ27_07865	COG0024	Methionine aminopeptidase
XJ27_07900	COG0052	Belongs to the universal ribosomal protein uS2 family
XJ27_07905	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
XJ27_07910	COG0745	RESPONSE REGULATOR receiver
XJ27_07910	COG3706	GGDEF domain
XJ27_07915	COG0528	UMP kinase activity
XJ27_07925	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
XJ27_07930	COG0575	Belongs to the CDS family
XJ27_07935	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
XJ27_07940	COG0750	zinc metalloprotease
XJ27_07955	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
XJ27_07960	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
XJ27_07965	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
XJ27_07970	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
XJ27_07985	COG0825	malonyl-CoA metabolic process
XJ27_08010	COG3293	Transposase
XJ27_08025	COG1695	Transcriptional regulator
XJ27_08045	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
XJ27_08065	COG2040	homocysteine
XJ27_08070	COG0833	amino acid
XJ27_08075	COG0346	lactoylglutathione lyase activity
XJ27_08080	COG1131	(ABC) transporter
XJ27_08095	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
XJ27_08095	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
XJ27_08105	COG2878	Part of a membrane complex involved in electron transport
XJ27_08120	COG1595	DNA-templated transcription, initiation
XJ27_08165	COG0251	oxidation-reduction process
XJ27_08175	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
XJ27_08175	COG0392	lysyltransferase activity
XJ27_08210	COG2814	Major facilitator Superfamily
XJ27_08215	COG1902	pentaerythritol trinitrate reductase activity
XJ27_08230	COG2824	Alkylphosphonate utilization operon protein PhnA
XJ27_08240	COG1047	Peptidyl-prolyl cis-trans
XJ27_08280	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
XJ27_08290	COG5487	UPF0391 membrane protein
XJ27_08295	COG1451	nucleotide metabolic process
XJ27_08320	COG0183	Belongs to the thiolase family
XJ27_08335	COG3706	GGDEF domain
XJ27_08335	COG0745	RESPONSE REGULATOR receiver
XJ27_08350	COG1793	dna ligase
XJ27_08350	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
XJ27_08355	COG1793	dna ligase
XJ27_08360	COG1201	RNA secondary structure unwinding
XJ27_08370	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
XJ27_08375	COG1278	Cold shock
XJ27_08380	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
XJ27_08390	COG1472	Belongs to the glycosyl hydrolase 3 family
XJ27_08395	COG3046	protein related to deoxyribodipyrimidine photolyase
XJ27_08400	COG1233	COG1233 Phytoene dehydrogenase and related
XJ27_08405	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
XJ27_08435	COG1381	Involved in DNA repair and RecF pathway recombination
XJ27_08440	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
XJ27_08465	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
XJ27_08480	COG1024	Enoyl-CoA hydratase
XJ27_08480	COG1250	3-hydroxyacyl-CoA dehydrogenase
XJ27_08490	COG0457	Tetratricopeptide repeat
XJ27_08525	COG1024	Enoyl-CoA hydratase
XJ27_08530	COG1960	acyl-CoA dehydrogenase activity
XJ27_08550	COG3867	Arabinogalactan endo-beta-1,4-galactanase
XJ27_08555	COG3250	beta-galactosidase activity
XJ27_08560	COG4948	Mandelate Racemase Muconate Lactonizing
XJ27_08565	COG1301	dicarboxylic acid transport
XJ27_08615	COG0840	transmembrane signaling receptor activity
XJ27_08625	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
XJ27_08635	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
XJ27_08650	COG0534	Mate efflux family protein
XJ27_08660	COG0336	Belongs to the RNA methyltransferase TrmD family
XJ27_08690	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
XJ27_08715	COG3534	alpha-L-arabinofuranosidase
XJ27_08740	COG4191	Histidine kinase
XJ27_08740	COG0784	Response regulator, receiver
XJ27_08745	COG2205	protein histidine kinase activity
XJ27_08745	COG4999	Histidine kinase
XJ27_08745	COG3437	response regulator, receiver
XJ27_08745	COG3850	Histidine kinase
XJ27_08750	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
XJ27_08760	COG2205	protein histidine kinase activity
XJ27_08765	COG5507	3-demethylubiquinone-9 3-methyltransferase
XJ27_08775	COG4771	TonB-dependent receptor
XJ27_08800	COG2172	sigma factor antagonist activity
XJ27_08805	COG1366	Belongs to the anti-sigma-factor antagonist family
XJ27_08810	COG1366	Belongs to the anti-sigma-factor antagonist family
XJ27_08815	COG1902	pentaerythritol trinitrate reductase activity
XJ27_08825	COG0326	Molecular chaperone. Has ATPase activity
XJ27_08830	COG2207	Transcriptional regulator
XJ27_08840	COG3152	Membrane
XJ27_08855	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
XJ27_08860	COG1845	cytochrome c oxidase, subunit III
XJ27_08865	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
XJ27_08885	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
XJ27_08895	COG0196	riboflavin kinase activity
XJ27_08925	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
XJ27_08930	COG0824	Thioesterase
XJ27_08940	COG1024	Enoyl-CoA hydratase
XJ27_08945	COG1946	Acyl-CoA thioesterase
XJ27_08955	COG1595	DNA-templated transcription, initiation
XJ27_08965	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
XJ27_09015	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
XJ27_09030	COG2197	response regulator
XJ27_09035	COG4585	Histidine kinase
XJ27_09050	COG2894	cell division
XJ27_09055	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
XJ27_09065	COG5002	protein histidine kinase activity
XJ27_09070	COG0745	RESPONSE REGULATOR receiver
XJ27_09085	COG2194	sulfuric ester hydrolase activity
XJ27_09105	COG2814	Major facilitator Superfamily
XJ27_09110	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
XJ27_09110	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
XJ27_09120	COG0656	L-ascorbic acid biosynthetic process
XJ27_09130	COG0753	catalase activity
XJ27_09135	COG2207	Transcriptional regulator
XJ27_09135	COG1917	Cupin 2, conserved barrel domain protein
XJ27_09145	COG1506	peptidase
XJ27_09145	COG0823	Involved in the tonB-independent uptake of proteins
XJ27_09155	COG1297	OPT oligopeptide transporter protein
XJ27_09170	COG0587	DNA-directed DNA polymerase activity
XJ27_09225	COG2080	2 iron, 2 sulfur cluster binding
XJ27_09230	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
XJ27_09235	COG1529	Aldehyde oxidase and xanthine dehydrogenase
XJ27_09280	COG3537	Alpha-1,2-mannosidase
XJ27_09290	COG1028	Short-chain dehydrogenase reductase Sdr
XJ27_09295	COG3293	Transposase
XJ27_09310	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
XJ27_09315	COG0328	RNA-DNA hybrid ribonuclease activity
XJ27_09315	COG0406	alpha-ribazole phosphatase activity
XJ27_09345	COG3039	Transposase
XJ27_09365	COG2963	transposase activity
XJ27_09370	COG2801	Transposase and inactivated derivatives
XJ27_09385	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
XJ27_09400	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
XJ27_09445	COG0330	HflC and HflK could
XJ27_09450	COG0330	HflC and HflK could
XJ27_09470	COG0678	peroxiredoxin activity
XJ27_09480	COG4953	penicillin-binding protein 1C
XJ27_09500	COG2373	Large extracellular alpha-helical protein
XJ27_09535	COG3829	transcription factor binding
XJ27_09545	COG2161	toxin-antitoxin pair type II binding
XJ27_09550	COG4115	mRNA cleavage
XJ27_09570	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
XJ27_09575	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
XJ27_09585	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
XJ27_09595	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
XJ27_09605	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
XJ27_09610	COG0333	Belongs to the bacterial ribosomal protein bL32 family
XJ27_09615	COG1399	metal-binding, possibly nucleic acid-binding protein
XJ27_09620	COG0424	maF-like protein
XJ27_09635	COG0714	Associated with various cellular activities
XJ27_09655	COG0537	adenosine 5'-monophosphoramidase activity
XJ27_09665	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
XJ27_09685	COG0314	molybdopterin synthase activity
XJ27_09690	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
XJ27_09700	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
XJ27_09705	COG1234	tRNA 3'-trailer cleavage
XJ27_09715	COG0859	PFAM glycosyl transferase family 9
XJ27_09790	COG2963	transposase activity
XJ27_09795	COG2801	Transposase and inactivated derivatives
XJ27_09820	COG0631	protein serine/threonine phosphatase activity
XJ27_09825	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
XJ27_09840	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
XJ27_09850	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
XJ27_09880	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
XJ27_09885	COG0740	serine-type endopeptidase activity
XJ27_09890	COG0544	peptidyl-prolyl cis-trans isomerase activity
XJ27_09940	COG4695	Portal protein
XJ27_10165	COG3293	Transposase
XJ27_10205	COG0473	3-isopropylmalate dehydrogenase activity
XJ27_10220	COG4783	chaperone-mediated protein folding
XJ27_10225	COG0745	RESPONSE REGULATOR receiver
XJ27_10235	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
XJ27_10245	COG0438	transferase activity, transferring glycosyl groups
XJ27_10250	COG0671	phosphoesterase, PA-phosphatase related
XJ27_10255	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
XJ27_10265	COG3291	Pkd domain containing protein
XJ27_10270	COG2833	Protein of unknown function (DUF455)
XJ27_10290	COG0285	dihydrofolate synthase activity
XJ27_10300	COG0406	alpha-ribazole phosphatase activity
XJ27_10320	COG1063	alcohol dehydrogenase
XJ27_10330	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
XJ27_10335	COG4208	sulfate ABC transporter
XJ27_10340	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
XJ27_10345	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
XJ27_10350	COG0156	8-amino-7-oxononanoate synthase activity
XJ27_10370	COG2885	chlorophyll binding
XJ27_10375	COG0604	alcohol dehydrogenase
XJ27_10380	COG1902	pentaerythritol trinitrate reductase activity
XJ27_10380	COG0446	pyridine nucleotide-disulphide oxidoreductase
XJ27_10395	COG0625	glutathione transferase activity
XJ27_10405	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
XJ27_10420	COG0154	amidase activity
XJ27_10430	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
XJ27_10445	COG0203	ribosomal protein L17
XJ27_10450	COG0202	RNA polymerase activity
XJ27_10455	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
XJ27_10460	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
XJ27_10465	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
XJ27_10470	COG0201	protein transport
XJ27_10485	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
XJ27_10505	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
XJ27_10515	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
XJ27_10520	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
XJ27_10525	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
XJ27_10530	COG0255	Belongs to the universal ribosomal protein uL29 family
XJ27_10555	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
XJ27_10575	COG0051	transcription antitermination factor activity, RNA binding
XJ27_10580	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
XJ27_10595	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
XJ27_10610	COG0222	ribosome binding
XJ27_10615	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
XJ27_10620	COG0081	regulation of translation
XJ27_10625	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
XJ27_10630	COG0250	Participates in transcription elongation, termination and antitermination
XJ27_10635	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
XJ27_10645	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
XJ27_10665	COG0012	GTP binding
XJ27_10670	COG0193	aminoacyl-tRNA hydrolase activity
XJ27_10675	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
XJ27_10680	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
XJ27_10695	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
XJ27_10705	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
XJ27_10720	COG0521	Mo-molybdopterin cofactor biosynthetic process
XJ27_10740	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
XJ27_10745	COG1295	ribonuclease BN
XJ27_10770	COG1404	Belongs to the peptidase S8 family
XJ27_10775	COG1404	Belongs to the peptidase S8 family
XJ27_10780	COG1404	Belongs to the peptidase S8 family
XJ27_10785	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
XJ27_10835	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
XJ27_10835	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
XJ27_10855	COG2890	protein-(glutamine-N5) methyltransferase activity
XJ27_10865	COG3634	alkyl hydroperoxide reductase activity
XJ27_10870	COG0583	DNA-binding transcription factor activity
XJ27_10880	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
XJ27_10890	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
XJ27_10900	COG2197	response regulator
XJ27_10905	COG5002	protein histidine kinase activity
XJ27_10905	COG0784	Response regulator, receiver
XJ27_10905	COG2205	protein histidine kinase activity
XJ27_10910	COG3706	GGDEF domain
XJ27_10910	COG0745	RESPONSE REGULATOR receiver
XJ27_10925	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
XJ27_10930	COG0697	spore germination
XJ27_10960	COG3386	PFAM SMP-30 Gluconolaconase
XJ27_10980	COG1024	Enoyl-CoA hydratase
XJ27_10990	COG0318	PFAM AMP-dependent synthetase and ligase
XJ27_10995	COG0583	DNA-binding transcription factor activity
XJ27_11000	COG3384	dioxygenase
XJ27_11030	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
XJ27_11035	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
XJ27_11045	COG2096	Adenosyltransferase
XJ27_11050	COG0123	including yeast histone deacetylase and acetoin utilization protein
XJ27_11055	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
XJ27_11065	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
XJ27_11070	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
XJ27_11075	COG2967	ApaG domain
XJ27_11080	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
XJ27_11085	COG0431	NADPH-dependent FMN reductase
XJ27_11090	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
XJ27_11100	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
XJ27_11105	COG1116	anion transmembrane transporter activity
XJ27_11125	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
XJ27_11145	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
XJ27_11155	COG0642	Histidine kinase
XJ27_11170	COG4181	ATPase activity
XJ27_11190	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
XJ27_11195	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
XJ27_11205	COG2963	transposase activity
XJ27_11250	COG4771	TonB-dependent receptor
XJ27_11260	COG0667	Aldo Keto reductase
XJ27_11265	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
XJ27_11275	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
XJ27_11280	COG4106	trans-aconitate 2-methyltransferase activity
XJ27_11290	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
XJ27_11300	COG2885	chlorophyll binding
XJ27_11320	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
XJ27_11340	COG3039	Transposase
XJ27_11390	COG0604	alcohol dehydrogenase
XJ27_11390	COG3321	synthase
XJ27_11390	COG1028	Short-chain dehydrogenase reductase Sdr
XJ27_11400	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
XJ27_11420	COG0494	nUDIX hydrolase
XJ27_11430	COG0653	protein targeting
XJ27_11435	COG0739	heme binding
XJ27_11460	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
XJ27_11465	COG1181	Belongs to the D-alanine--D-alanine ligase family
XJ27_11470	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
XJ27_11490	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
XJ27_11495	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
XJ27_11505	COG3116	cell division
XJ27_11555	COG1988	membrane-bound metal-dependent
XJ27_11560	COG0277	FAD linked oxidase domain protein
XJ27_11565	COG0745	RESPONSE REGULATOR receiver
XJ27_11570	COG2205	protein histidine kinase activity
XJ27_11580	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
XJ27_11585	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
XJ27_11600	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
XJ27_11640	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
XJ27_11640	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
XJ27_11655	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
XJ27_11665	COG0488	(ABC) transporter
XJ27_11670	COG0242	peptide deformylase activity
XJ27_11685	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
XJ27_11730	COG2188	Transcriptional regulator
XJ27_11760	COG1450	Type ii and iii secretion system protein
XJ27_11775	COG3166	PFAM Fimbrial assembly family protein
XJ27_11780	COG3156	type II secretion system protein K
XJ27_11785	COG4795	General secretion pathway protein
XJ27_11790	COG2165	general secretion pathway protein
XJ27_11795	COG4970	Tfp pilus assembly protein FimT
XJ27_11800	COG2165	general secretion pathway protein
XJ27_11805	COG1459	type II secretion system
XJ27_11810	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
XJ27_11815	COG1404	Belongs to the peptidase S8 family
XJ27_11820	COG5295	Hep Hag repeat protein
XJ27_11825	COG1404	Belongs to the peptidase S8 family
XJ27_11835	COG0047	phosphoribosylformylglycinamidine synthase activity
XJ27_11835	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
XJ27_11840	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
XJ27_11845	COG4974	Belongs to the 'phage' integrase family
XJ27_11860	COG0795	lipopolysaccharide-transporting ATPase activity
XJ27_11880	COG0525	valine-tRNA ligase activity
XJ27_11910	COG1183	phosphatidylcholine synthase activity
XJ27_11935	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
XJ27_11940	COG1127	ABC transporter
XJ27_11985	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
XJ27_11990	COG0662	Cupin 2, conserved barrel domain protein
XJ27_11990	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
XJ27_12015	COG2086	electron transfer activity
XJ27_12035	COG0463	Glycosyl transferase, family 2
XJ27_12060	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
XJ27_12100	COG0626	cystathionine gamma-synthase activity
XJ27_12130	COG0625	glutathione transferase activity
XJ27_12140	COG0513	Belongs to the DEAD box helicase family
XJ27_12150	COG4771	TonB-dependent receptor
XJ27_12155	COG0720	synthase
XJ27_12165	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
XJ27_12170	COG1956	GAF domain-containing protein
XJ27_12180	COG2819	hydrolase of the alpha beta superfamily
XJ27_12190	COG0546	phosphoglycolate phosphatase activity
XJ27_12195	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
XJ27_12200	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
XJ27_12215	COG0339	signal peptide processing
XJ27_12260	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
XJ27_12265	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
XJ27_12275	COG1136	(ABC) transporter
XJ27_12285	COG0577	efflux transmembrane transporter activity
XJ27_12290	COG2204	response regulator
XJ27_12295	COG4191	Histidine kinase
XJ27_12305	COG3293	Transposase
XJ27_12315	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
XJ27_12330	COG0355	proton-transporting ATP synthase activity, rotational mechanism
XJ27_12350	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
XJ27_12355	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
XJ27_12365	COG0356	it plays a direct role in the translocation of protons across the membrane
XJ27_12380	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
XJ27_12390	COG0508	dehydrogenase complex catalyzes the overall conversion of
XJ27_12420	COG2011	ABC-type metal ion transport system permease component
XJ27_12425	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
XJ27_12430	COG0697	spore germination
XJ27_12435	COG1666	GTP binding
XJ27_12455	COG1187	pseudouridine synthase activity
XJ27_12460	COG2813	Specifically methylates the guanine in position
XJ27_12480	COG0784	Response regulator, receiver
XJ27_12480	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
XJ27_12480	COG2205	protein histidine kinase activity
XJ27_12480	COG2198	Histidine kinase
XJ27_12500	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
XJ27_12505	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
XJ27_12510	COG1522	sequence-specific DNA binding
XJ27_12605	COG3293	Transposase
XJ27_12615	COG0842	Transport permease protein
XJ27_12620	COG1131	(ABC) transporter
XJ27_12625	COG0025	NhaP-type Na H and K H
XJ27_12640	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
XJ27_12645	COG1573	uracil-dna glycosylase
XJ27_12655	COG3384	dioxygenase
XJ27_12665	COG0583	DNA-binding transcription factor activity
XJ27_12675	COG0667	Aldo Keto reductase
XJ27_12685	COG3590	peptidase
XJ27_12710	COG0531	amino acid
XJ27_12725	COG2972	Histidine kinase
XJ27_12745	COG3685	Protein conserved in bacteria
XJ27_12750	COG3546	catalase activity
XJ27_12775	COG2204	response regulator
XJ27_12790	COG1028	Short-chain dehydrogenase reductase Sdr
XJ27_12795	COG3039	Transposase
XJ27_12800	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
XJ27_12820	COG1132	(ABC) transporter
XJ27_12830	COG1063	alcohol dehydrogenase
XJ27_12850	COG0583	DNA-binding transcription factor activity
XJ27_12855	COG2814	Major facilitator Superfamily
XJ27_12910	COG0251	oxidation-reduction process
XJ27_12940	COG0659	secondary active sulfate transmembrane transporter activity
XJ27_12960	COG4977	sequence-specific DNA binding
XJ27_12975	COG1309	transcriptional regulator
XJ27_12980	COG0583	DNA-binding transcription factor activity
XJ27_12985	COG1902	pentaerythritol trinitrate reductase activity
XJ27_13000	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
XJ27_13005	COG1490	D-aminoacyl-tRNA deacylase activity
XJ27_13010	COG1560	Kdo2-lipid A biosynthetic process
XJ27_13020	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
XJ27_13055	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
XJ27_13055	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
XJ27_13060	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
XJ27_13065	COG0242	peptide deformylase activity
XJ27_13070	COG1652	LysM domain
XJ27_13075	COG0758	DNA mediated transformation
XJ27_13095	COG1754	DNA topoisomerase type I activity
XJ27_13095	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
XJ27_13100	COG0009	L-threonylcarbamoyladenylate synthase
XJ27_13115	COG1028	Short-chain dehydrogenase reductase Sdr
XJ27_13125	COG0616	signal peptide processing
XJ27_13130	COG0534	Mate efflux family protein
XJ27_13145	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
XJ27_13155	COG3293	Transposase
XJ27_13160	COG0625	glutathione transferase activity
XJ27_13175	COG1252	NADH dehydrogenase
XJ27_13180	COG2860	membrane
XJ27_13185	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
XJ27_13190	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
XJ27_13195	COG2201	protein-glutamate methylesterase activity
XJ27_13200	COG2177	Part of the ABC transporter FtsEX involved in
XJ27_13205	COG2884	Cell division ATP-binding protein ftsE
XJ27_13215	COG3118	belongs to the thioredoxin family
XJ27_13220	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
XJ27_13230	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
XJ27_13260	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
XJ27_13260	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
XJ27_13265	COG1473	amidohydrolase
XJ27_13270	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
XJ27_13275	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
XJ27_13285	COG4948	Mandelate Racemase Muconate Lactonizing
XJ27_13295	COG3023	N-Acetylmuramoyl-L-alanine amidase
XJ27_13300	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
XJ27_13340	COG5383	Protein conserved in bacteria
XJ27_13350	COG0531	amino acid
XJ27_13365	COG4682	membrane
XJ27_13370	COG2133	pyrroloquinoline quinone binding
XJ27_13375	COG3293	Transposase
XJ27_13390	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
XJ27_13400	COG0828	Belongs to the bacterial ribosomal protein bS21 family
XJ27_13405	COG1610	YqeY-like protein
XJ27_13410	COG1295	ribonuclease BN
XJ27_13415	COG0358	DNA primase activity
XJ27_13430	COG0109	protoheme IX farnesyltransferase activity
XJ27_13460	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
XJ27_13475	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
XJ27_13520	COG0739	heme binding
XJ27_13535	COG2807	transmembrane transport
XJ27_13540	COG0708	Exodeoxyribonuclease III
XJ27_13555	COG1192	Involved in chromosome partitioning
XJ27_13560	COG1475	DNA binding
XJ27_13575	COG0463	Glycosyl transferase, family 2
XJ27_13595	COG0756	dUTP diphosphatase activity
XJ27_13600	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
XJ27_13610	COG0018	arginyl-trna synthetase
XJ27_13620	COG4221	oxidoreductase activity
XJ27_13625	COG2755	lipolytic protein G-D-S-L family
XJ27_13625	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
XJ27_13635	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
XJ27_13640	COG1166	arginine decarboxylase activity
XJ27_13675	COG2960	long-chain fatty acid transporting porin activity
XJ27_13680	COG0606	chelatase, subunit chli
XJ27_13695	COG4943	cyclic-guanylate-specific phosphodiesterase activity
XJ27_13745	COG1090	epimerase
XJ27_13755	COG0642	Histidine kinase
XJ27_13775	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
XJ27_13800	COG1011	Hydrolase
XJ27_13805	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
XJ27_13825	COG2197	response regulator
XJ27_13830	COG4585	Histidine kinase
XJ27_13835	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
XJ27_13840	COG1136	(ABC) transporter
XJ27_13865	COG0697	spore germination
XJ27_13890	COG0180	Tryptophanyl-tRNA synthetase
XJ27_13895	COG3237	CsbD-like
XJ27_13935	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
XJ27_13950	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
XJ27_13955	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
XJ27_13955	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
XJ27_13965	COG3228	Belongs to the MtfA family
XJ27_13980	COG2205	protein histidine kinase activity
XJ27_13985	COG0745	RESPONSE REGULATOR receiver
XJ27_13995	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
XJ27_14015	COG1199	ATP-dependent helicase activity
XJ27_14045	COG3293	Transposase
XJ27_14050	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
XJ27_14085	COG0625	glutathione transferase activity
XJ27_14120	COG4555	ABC transporter
XJ27_14130	COG1476	TRANSCRIPTIONal
XJ27_14155	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
XJ27_14160	COG1131	(ABC) transporter
XJ27_14165	COG0842	Transport permease protein
XJ27_14175	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
XJ27_14195	COG1607	acyl-coa hydrolase
XJ27_14210	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
XJ27_14215	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
XJ27_14225	COG0045	succinate-CoA ligase (ADP-forming) activity
XJ27_14225	COG1042	CoA-binding domain protein
XJ27_14225	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
XJ27_14240	COG1629	transport
XJ27_14240	COG4771	TonB-dependent receptor
XJ27_14245	COG2239	Acts as a magnesium transporter
XJ27_14255	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
XJ27_14260	COG3387	PFAM Glycoside hydrolase 15-related
XJ27_14275	COG3100	YcgL domain-containing protein
XJ27_14280	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
XJ27_14300	COG1028	Short-chain dehydrogenase reductase Sdr
XJ27_14330	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
XJ27_14345	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
XJ27_14385	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
XJ27_14385	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
XJ27_14440	COG0210	DNA helicase
XJ27_14455	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
XJ27_14465	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
XJ27_14475	COG2159	amidohydrolase
XJ27_14480	COG0267	Belongs to the bacterial ribosomal protein bL33 family
XJ27_14485	COG0227	Belongs to the bacterial ribosomal protein bL28 family
XJ27_14495	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
XJ27_14520	COG3540	Alkaline phosphatase
XJ27_14530	COG2091	lysine biosynthetic process via aminoadipic acid
XJ27_14545	COG0708	Exodeoxyribonuclease III
XJ27_14560	COG1940	carbohydrate kinase activity
XJ27_14570	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
XJ27_14580	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
XJ27_14585	COG3162	membrane
XJ27_14645	COG1028	Short-chain dehydrogenase reductase Sdr
XJ27_14650	COG0179	Fumarylacetoacetate (FAA) hydrolase
XJ27_14655	COG4948	Mandelate Racemase Muconate Lactonizing
XJ27_14660	COG3254	rhamnose metabolic process
XJ27_14665	COG0738	Major facilitator superfamily
XJ27_14670	COG1414	Transcriptional regulator
XJ27_14685	COG1971	Probably functions as a manganese efflux pump
XJ27_14690	COG2205	protein histidine kinase activity
XJ27_14695	COG3459	Glycosyltransferase 36 associated
XJ27_14700	COG2211	Major facilitator Superfamily
XJ27_14705	COG3265	gluconokinase activity
XJ27_14710	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
XJ27_14730	COG3039	Transposase
XJ27_14745	COG2911	Protein conserved in bacteria
XJ27_14750	COG0729	surface antigen
XJ27_14765	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
XJ27_14775	COG0519	Catalyzes the synthesis of GMP from XMP
XJ27_14775	COG0518	GMP synthase (glutamine-hydrolyzing) activity
XJ27_14785	COG0805	protein transport
XJ27_14790	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
XJ27_14795	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
XJ27_14805	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
XJ27_14825	COG2974	May be involved in recombination
XJ27_14830	COG0037	tRNA processing
XJ27_14835	COG2115	Belongs to the xylose isomerase family
XJ27_14845	COG3661	Belongs to the glycosyl hydrolase 67 family
XJ27_14855	COG4948	Mandelate Racemase Muconate Lactonizing
XJ27_14865	COG1472	Belongs to the glycosyl hydrolase 3 family
XJ27_14870	COG0246	Mannitol dehydrogenase
XJ27_14880	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
XJ27_14885	COG1620	l-lactate permease
XJ27_14895	COG3386	PFAM SMP-30 Gluconolaconase
XJ27_14905	COG3250	beta-galactosidase activity
XJ27_14910	COG1904	glucuronate isomerase
XJ27_14915	COG3693	PFAM glycoside hydrolase, family 10
XJ27_14930	COG2211	Major facilitator Superfamily
XJ27_14970	COG2937	Belongs to the GPAT DAPAT family
XJ27_14995	COG0284	orotidine-5'-phosphate decarboxylase activity
XJ27_15000	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
XJ27_15005	COG3132	Protein of unknown function, DUF480
XJ27_15025	COG0210	DNA helicase
XJ27_15030	COG1435	thymidine kinase activity
XJ27_15040	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
XJ27_15050	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
XJ27_15080	COG3135	benzoate transporter
XJ27_15100	COG0676	glucose-6-phosphate 1-epimerase activity
XJ27_15110	COG3012	SEC-C Motif Domain Protein
XJ27_15115	COG0730	response to heat
XJ27_15145	COG0302	gtp cyclohydrolase
XJ27_15160	COG1566	PFAM secretion protein HlyD family protein
XJ27_15170	COG1289	transmembrane transporter activity
XJ27_15175	COG0477	Major facilitator Superfamily
XJ27_15180	COG0583	DNA-binding transcription factor activity
XJ27_15185	COG4221	oxidoreductase activity
XJ27_15195	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
XJ27_15225	COG3293	Transposase
XJ27_15235	COG3550	peptidyl-serine autophosphorylation
XJ27_15320	COG2207	Transcriptional regulator
XJ27_15325	COG1028	Short-chain dehydrogenase reductase Sdr
XJ27_15335	COG3549	Plasmid maintenance system killer
XJ27_15350	COG1074	ATP-dependent DNA helicase activity
XJ27_15355	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
XJ27_15360	COG1127	ABC transporter
XJ27_15365	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
XJ27_15370	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
XJ27_15385	COG2853	Lipoprotein
XJ27_15410	COG0386	Belongs to the glutathione peroxidase family
XJ27_15420	COG1322	Protein conserved in bacteria
XJ27_15425	COG0625	glutathione transferase activity
XJ27_15430	COG0531	amino acid
XJ27_15435	COG3537	Alpha-1,2-mannosidase
XJ27_15445	COG2203	Gaf domain
XJ27_15445	COG2199	diguanylate cyclase activity
XJ27_15450	COG3835	regulator
XJ27_15455	COG1929	Belongs to the glycerate kinase type-1 family
XJ27_15460	COG2271	Major facilitator Superfamily
XJ27_15500	COG1126	abc transporter atp-binding protein
XJ27_15515	COG1473	amidohydrolase
XJ27_15520	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
XJ27_15525	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
XJ27_15535	COG3039	Transposase
XJ27_15540	COG4206	TonB-dependent receptor
XJ27_15560	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
XJ27_15565	COG0861	Integral membrane protein TerC family
XJ27_15575	COG0584	glycerophosphoryl diester phosphodiesterase
XJ27_15600	COG0706	membrane insertase activity
XJ27_15610	COG0230	Belongs to the bacterial ribosomal protein bL34 family
XJ27_15630	COG0187	DNA topoisomerase II activity
XJ27_15640	COG0501	Belongs to the peptidase M48B family
XJ27_15670	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
XJ27_15680	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
XJ27_15710	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
XJ27_15715	COG0793	Belongs to the peptidase S41A family
XJ27_15720	COG4942	peptidase
XJ27_15730	COG2234	aminopeptidase activity
XJ27_15740	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
XJ27_15745	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
XJ27_15750	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
XJ27_15755	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
XJ27_15760	COG1064	alcohol dehydrogenase
XJ27_15770	COG0493	'glutamate synthase
XJ27_15775	COG0070	glutamate synthase
XJ27_15775	COG0069	glutamate synthase activity
XJ27_15775	COG0067	glutamate synthase
XJ27_15805	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
XJ27_15845	COG1028	Short-chain dehydrogenase reductase Sdr
XJ27_15930	COG1205	dead DEAH box helicase
XJ27_15930	COG1111	helicase
XJ27_15940	COG1272	protein, Hemolysin III
XJ27_15965	COG1028	Short-chain dehydrogenase reductase Sdr
XJ27_15985	COG0583	DNA-binding transcription factor activity
XJ27_15990	COG1028	Short-chain dehydrogenase reductase Sdr
XJ27_16000	COG2249	NAD(P)H dehydrogenase (quinone) activity
XJ27_16015	COG1733	regulation of RNA biosynthetic process
XJ27_16020	COG3039	Transposase
XJ27_16030	COG2801	Transposase and inactivated derivatives
XJ27_16035	COG2963	transposase activity
XJ27_16075	COG3237	CsbD-like
XJ27_16110	COG2816	NAD+ diphosphatase activity
XJ27_16125	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
XJ27_16170	COG0714	Associated with various cellular activities
XJ27_16210	COG4772	TonB-dependent receptor
XJ27_16220	COG0662	Cupin 2, conserved barrel domain protein
XJ27_16230	COG1012	belongs to the aldehyde dehydrogenase family
XJ27_16280	COG1755	Isoprenylcysteine carboxyl methyltransferase
XJ27_16290	COG2197	response regulator
XJ27_16300	COG3710	Transcriptional regulator
XJ27_16305	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
XJ27_16315	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
XJ27_16320	COG4771	TonB-dependent receptor
XJ27_16405	COG2963	transposase activity
XJ27_16410	COG2801	Transposase and inactivated derivatives
XJ27_16435	COG0366	Alpha amylase catalytic
XJ27_16440	COG0366	Alpha amylase catalytic
XJ27_16445	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
XJ27_16475	COG2755	lipolytic protein G-D-S-L family
XJ27_16485	COG2755	lipolytic protein G-D-S-L family
XJ27_16485	COG0657	acetylesterase activity
XJ27_16495	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
XJ27_16510	COG3507	Belongs to the glycosyl hydrolase 43 family
XJ27_16515	COG1609	Transcriptional regulator
XJ27_16525	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
XJ27_16530	COG1028	Short-chain dehydrogenase reductase Sdr
XJ27_16540	COG2755	lipolytic protein G-D-S-L family
XJ27_16560	COG3186	Phenylalanine-4-hydroxylase
XJ27_16565	COG1522	sequence-specific DNA binding
XJ27_16575	COG1752	Esterase of the alpha-beta hydrolase superfamily
XJ27_16580	COG1119	ATPase activity
XJ27_16595	COG0517	IMP dehydrogenase activity
XJ27_16595	COG1125	glycine betaine transport
XJ27_16610	COG1262	PFAM Formylglycine-generating sulfatase enzyme
XJ27_16620	COG3550	peptidyl-serine autophosphorylation
XJ27_16625	COG1396	sequence-specific DNA binding
XJ27_16645	COG0489	protein tyrosine kinase activity
XJ27_16650	COG2062	phosphohistidine phosphatase, SixA
XJ27_16660	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
XJ27_16690	COG1881	PFAM PEBP family protein
XJ27_16705	COG0174	glutamine synthetase
XJ27_16710	COG0347	Belongs to the P(II) protein family
XJ27_16715	COG0004	ammonium transporteR
XJ27_16720	COG3852	Histidine kinase
XJ27_16725	COG2204	response regulator
XJ27_16730	COG2032	superoxide dismutase activity
XJ27_16735	COG2032	superoxide dismutase activity
XJ27_16745	COG0183	Belongs to the thiolase family
XJ27_16785	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
XJ27_16795	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
XJ27_16805	COG0028	Belongs to the TPP enzyme family
XJ27_16835	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
XJ27_16850	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
XJ27_16855	COG3177	Filamentation induced by cAMP protein fic
XJ27_16860	COG0596	Alpha beta hydrolase
XJ27_16870	COG0318	PFAM AMP-dependent synthetase and ligase
XJ27_16885	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
XJ27_16895	COG1181	Belongs to the D-alanine--D-alanine ligase family
XJ27_16910	COG0564	pseudouridine synthase activity
XJ27_16930	COG1446	asparaginase
XJ27_16935	COG0339	signal peptide processing
XJ27_16955	COG0583	DNA-binding transcription factor activity
XJ27_16960	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
XJ27_16965	COG2224	Isocitrate lyase
XJ27_16970	COG5001	Diguanylate cyclase
XJ27_17000	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
XJ27_17005	COG1960	acyl-CoA dehydrogenase activity
XJ27_17060	COG0523	cobalamin synthesis protein
XJ27_17075	COG0697	spore germination
XJ27_17085	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
XJ27_17100	COG1846	Transcriptional regulator
XJ27_17105	COG1764	response to oxidative stress
XJ27_17130	COG0656	L-ascorbic acid biosynthetic process
XJ27_17135	COG2130	NADP-dependent
XJ27_17150	COG1187	pseudouridine synthase activity
XJ27_17165	COG1643	Atp-dependent helicase
XJ27_17170	COG0840	transmembrane signaling receptor activity
XJ27_17175	COG4807	Protein conserved in bacteria
XJ27_17180	COG2351	hydroxyisourate hydrolase activity
XJ27_17185	COG2072	flavoprotein involved in K transport
XJ27_17205	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
XJ27_17230	COG0596	Alpha beta hydrolase
XJ27_17295	COG2252	PERMEase
XJ27_17315	COG0084	hydrolase, TatD family'
XJ27_17330	COG0583	DNA-binding transcription factor activity
XJ27_17335	COG2814	Major facilitator Superfamily
XJ27_17360	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
XJ27_17365	COG1902	pentaerythritol trinitrate reductase activity
XJ27_17400	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
XJ27_17405	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
XJ27_17410	COG0583	DNA-binding transcription factor activity
XJ27_17425	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
XJ27_17440	COG0702	epimerase
XJ27_17445	COG1733	regulation of RNA biosynthetic process
XJ27_17455	COG2801	Transposase and inactivated derivatives
XJ27_17460	COG2963	transposase activity
XJ27_17500	COG2801	Transposase and inactivated derivatives
XJ27_17505	COG2963	transposase activity
XJ27_17540	COG0129	dihydroxy-acid dehydratase activity
XJ27_17550	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
XJ27_17600	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
XJ27_17605	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
XJ27_17635	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
XJ27_17640	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
XJ27_17650	COG3485	protocatechuate 3,4-dioxygenase
XJ27_17665	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
XJ27_17670	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
XJ27_17680	COG1414	Transcriptional regulator
XJ27_17700	COG0445	tRNA wobble uridine modification
XJ27_17710	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
XJ27_17750	COG0156	8-amino-7-oxononanoate synthase activity
XJ27_17755	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
XJ27_17760	COG1040	competence protein
XJ27_17815	COG2111	Na H antiporter
XJ27_17815	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
XJ27_17820	COG1006	Multisubunit Na H antiporter MnhC subunit
XJ27_17825	COG0651	ATP synthesis coupled electron transport
XJ27_17835	COG2212	antiporter activity
XJ27_17840	COG1320	monovalent cation:proton antiporter activity
XJ27_17860	COG2852	Protein conserved in bacteria
XJ27_17880	COG3104	oligopeptide transport
XJ27_17895	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
XJ27_17910	COG0508	dehydrogenase complex catalyzes the overall conversion of
XJ27_17920	COG0513	Belongs to the DEAD box helicase family
XJ27_17930	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
XJ27_17970	COG1028	Short-chain dehydrogenase reductase Sdr
XJ27_17975	COG0702	epimerase
XJ27_18000	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
XJ27_18005	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
XJ27_18010	COG0297	glycogen (starch) synthase activity
XJ27_18015	COG3706	GGDEF domain
XJ27_18025	COG2354	Protein conserved in bacteria
XJ27_18030	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
XJ27_18035	COG1368	sulfuric ester hydrolase activity
XJ27_18040	COG3264	Mechanosensitive ion channel
XJ27_18040	COG1511	domain protein
XJ27_18060	COG3590	peptidase
XJ27_18065	COG3293	Transposase
XJ27_18075	COG0582	viral genome integration into host DNA
XJ27_18100	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
XJ27_18120	COG1597	lipid kinase activity
XJ27_18145	COG2267	carboxylic ester hydrolase activity
XJ27_18150	COG2801	Transposase and inactivated derivatives
XJ27_18155	COG2963	transposase activity
XJ27_18220	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
XJ27_18300	COG0840	transmembrane signaling receptor activity
XJ27_18315	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
XJ27_18320	COG0134	indole-3-glycerol-phosphate synthase activity
XJ27_18330	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
XJ27_18340	COG2076	Multidrug Resistance protein
XJ27_18350	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
XJ27_18410	COG0316	Belongs to the HesB IscA family
XJ27_18420	COG2816	NAD+ diphosphatase activity
XJ27_18425	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
XJ27_18445	COG2814	Major facilitator Superfamily
XJ27_18450	COG1289	transmembrane transporter activity
XJ27_18455	COG0151	Belongs to the GarS family
XJ27_18460	COG0138	bifunctional purine biosynthesis protein purh
XJ27_18475	COG3039	Transposase
XJ27_18490	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
XJ27_18510	COG2264	protein methyltransferase activity
XJ27_18560	COG0210	DNA helicase
XJ27_18570	COG0439	Biotin carboxylase
XJ27_18580	COG0511	ligase activity, forming carbon-carbon bonds
XJ27_18585	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
XJ27_18595	COG1324	tolerance protein
XJ27_18605	COG2356	endonuclease I
XJ27_18610	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
XJ27_18640	COG3293	Transposase
XJ27_18655	COG3039	Transposase
XJ27_18660	COG2801	Transposase and inactivated derivatives
XJ27_18665	COG2963	transposase activity
XJ27_18670	COG3550	peptidyl-serine autophosphorylation
XJ27_18675	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
XJ27_18685	COG3293	Transposase
XJ27_18710	COG3712	iron ion homeostasis
XJ27_18735	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
XJ27_18740	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
XJ27_18760	COG0778	Nitroreductase
XJ27_18765	COG2353	YceI-like domain
XJ27_18785	COG3052	prosthetic group binding
XJ27_18805	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
XJ27_18820	COG1802	Transcriptional regulator
XJ27_18900	COG0210	DNA helicase
XJ27_19010	COG0435	Glutathione S-transferase
XJ27_19045	COG1506	peptidase
XJ27_19045	COG0823	Involved in the tonB-independent uptake of proteins
XJ27_19055	COG3706	GGDEF domain
XJ27_19080	COG0697	spore germination
XJ27_19100	COG1113	amino acid transport
XJ27_19105	COG0598	Magnesium transport protein CorA
XJ27_19115	COG3507	Belongs to the glycosyl hydrolase 43 family
XJ27_19170	COG0840	transmembrane signaling receptor activity
XJ27_19175	COG5297	Belongs to the glycosyl hydrolase family 6
XJ27_19175	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
XJ27_19180	COG0659	secondary active sulfate transmembrane transporter activity
XJ27_19185	COG3706	GGDEF domain
XJ27_19210	COG3275	phosphorelay sensor kinase activity
XJ27_19220	COG0181	hydroxymethylbilane synthase activity
XJ27_19245	COG1505	serine-type exopeptidase activity
XJ27_19260	COG3039	Transposase
XJ27_19275	COG2832	Protein of unknown function (DUF454)
XJ27_19285	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
XJ27_19295	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
XJ27_19300	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
XJ27_19305	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
XJ27_19310	COG0355	proton-transporting ATP synthase activity, rotational mechanism
XJ27_19335	COG2226	methyltransferase
XJ27_19340	COG3300	MHYT domain
XJ27_19340	COG5001	Diguanylate cyclase
XJ27_19345	COG0308	aminopeptidase N
XJ27_19390	COG3284	Transcriptional regulator
XJ27_19400	COG1077	Cell shape determining protein MreB Mrl
XJ27_19405	COG1792	Involved in formation and maintenance of cell shape
XJ27_19410	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
XJ27_19420	COG0772	Belongs to the SEDS family
XJ27_19430	COG2951	lytic endotransglycosylase activity
XJ27_19435	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
XJ27_19440	COG1686	Belongs to the peptidase S11 family
XJ27_19450	COG2921	Belongs to the UPF0250 family
XJ27_19455	COG0321	lipoyl(octanoyl) transferase activity
XJ27_19460	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
XJ27_19480	COG1051	belongs to the nudix hydrolase family
XJ27_19480	COG1056	cytidyltransferase-related domain
XJ27_19515	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
XJ27_19520	COG0673	inositol 2-dehydrogenase activity
XJ27_19525	COG2823	Periplasmic or secreted lipoprotein
XJ27_19530	COG4251	negative regulation of phosphorylation
XJ27_19535	COG0784	Response regulator, receiver
XJ27_19540	COG4191	Histidine kinase
XJ27_19545	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
XJ27_19550	COG1028	Short-chain dehydrogenase reductase Sdr
XJ27_19595	COG1459	type II secretion system
XJ27_19620	COG3156	type II secretion system protein K
XJ27_19645	COG3250	beta-galactosidase activity
XJ27_19670	COG1609	Transcriptional regulator
XJ27_19675	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
XJ27_19680	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
XJ27_19705	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
XJ27_19715	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
XJ27_19725	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
XJ27_19740	COG0218	Necessary for normal cell division and for the maintenance of normal septation
XJ27_19750	COG2205	protein histidine kinase activity
XJ27_19755	COG0745	RESPONSE REGULATOR receiver
XJ27_19785	COG3791	Glutathione-dependent formaldehyde-activating
XJ27_19795	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
XJ27_19805	COG0697	spore germination
XJ27_19815	COG3293	Transposase
XJ27_19855	COG0402	S-adenosylhomocysteine deaminase activity
XJ27_19870	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
XJ27_19875	COG0726	polysaccharide deacetylase
XJ27_19880	COG4773	Receptor
XJ27_19960	COG2211	Major facilitator Superfamily
XJ27_19965	COG1609	Transcriptional regulator
XJ27_19970	COG1028	Short-chain dehydrogenase reductase Sdr
XJ27_19975	COG2851	Citrate transporter
XJ27_19990	COG0642	Histidine kinase
XJ27_19995	COG1840	ABC-type Fe3 transport system, periplasmic component
XJ27_20000	COG2197	response regulator
XJ27_20015	COG4191	Histidine kinase
XJ27_20030	COG0280	phosphate acetyltransferase
XJ27_20030	COG0281	malic enzyme
XJ27_20055	COG1560	Kdo2-lipid A biosynthetic process
XJ27_20060	COG1519	Transferase
XJ27_20065	COG1538	Outer membrane efflux protein
XJ27_20070	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
XJ27_20090	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
XJ27_20095	COG0066	3-isopropylmalate dehydratase activity
XJ27_20100	COG2226	methyltransferase
XJ27_20105	COG0473	3-isopropylmalate dehydrogenase activity
XJ27_20110	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
XJ27_20135	COG0405	Gamma-glutamyltransferase
XJ27_20140	COG0840	transmembrane signaling receptor activity
XJ27_20145	COG4946	Tricorn protease homolog
XJ27_20145	COG1506	peptidase
XJ27_20145	COG0823	Involved in the tonB-independent uptake of proteins
XJ27_20160	COG3710	Transcriptional regulator
XJ27_20180	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
XJ27_20190	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
XJ27_20210	COG0563	adenylate kinase activity
XJ27_20215	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
XJ27_20225	COG3781	membrane
XJ27_20230	COG0671	phosphoesterase, PA-phosphatase related
XJ27_20240	COG1028	Short-chain dehydrogenase reductase Sdr
XJ27_20255	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
XJ27_20260	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
XJ27_20290	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
XJ27_20295	COG3241	Transfers electrons from cytochrome c551 to cytochrome oxidase
XJ27_20305	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
XJ27_20315	COG0352	thiamine-phosphate diphosphorylase activity
XJ27_20320	COG1773	rubredoxin
XJ27_20325	COG2912	Transglutaminase-like superfamily
XJ27_20345	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
XJ27_20370	COG0006	proline dipeptidase activity
XJ27_20375	COG0006	proline dipeptidase activity
XJ27_20390	COG0635	Involved in the biosynthesis of porphyrin-containing compound
XJ27_20400	COG0346	lactoylglutathione lyase activity
XJ27_20405	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
XJ27_20410	COG1561	YicC-like family, N-terminal region
XJ27_20420	COG1758	RNA polymerase activity
XJ27_20425	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
XJ27_20435	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
XJ27_20460	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
XJ27_20490	COG0714	Associated with various cellular activities
XJ27_20520	COG1301	dicarboxylic acid transport
XJ27_20535	COG4773	Receptor
XJ27_20540	COG0583	DNA-binding transcription factor activity
XJ27_20545	COG1028	Short-chain dehydrogenase reductase Sdr
XJ27_20560	COG1376	ErfK ybiS ycfS ynhG family protein
XJ27_20580	COG3682	Transcriptional regulator
XJ27_20595	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
XJ27_20600	COG4149	molybdate abc transporter
XJ27_20605	COG0725	ABC transporter, periplasmic molybdate-binding protein
XJ27_20610	COG3453	Protein conserved in bacteria
XJ27_20610	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
XJ27_20620	COG3047	cAMP biosynthetic process
XJ27_20635	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
XJ27_20655	COG0126	phosphoglycerate kinase activity
XJ27_20665	COG0469	pyruvate kinase activity
XJ27_20670	COG3588	fructose-bisphosphate aldolase
XJ27_20675	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
XJ27_20690	COG1648	precorrin-2 dehydrogenase activity
XJ27_20690	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
XJ27_20705	COG2205	protein histidine kinase activity
XJ27_20705	COG2198	Histidine kinase
XJ27_20705	COG0784	Response regulator, receiver
XJ27_20730	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
XJ27_20745	COG0529	Catalyzes the synthesis of activated sulfate
XJ27_20745	COG2895	sulfate adenylyltransferase (ATP) activity
XJ27_20750	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
XJ27_20755	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
XJ27_20770	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
XJ27_20775	COG2272	Belongs to the type-B carboxylesterase lipase family
XJ27_20785	COG4948	Mandelate Racemase Muconate Lactonizing
XJ27_20790	COG3250	beta-galactosidase activity
XJ27_20800	COG1609	Transcriptional regulator
XJ27_20830	COG0471	metal ion transport
XJ27_20830	COG3273	potassium ion transport
XJ27_20835	COG0220	tRNA (guanine-N7-)-methyltransferase activity
XJ27_20885	COG2801	Transposase and inactivated derivatives
XJ27_20890	COG2963	transposase activity
XJ27_20900	COG1238	metal cluster binding
XJ27_20905	COG0840	transmembrane signaling receptor activity
XJ27_20940	COG0189	ligase activity
XJ27_20945	COG0745	RESPONSE REGULATOR receiver
XJ27_20975	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
XJ27_21010	COG0045	succinate-CoA ligase (ADP-forming) activity
XJ27_21015	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
XJ27_21045	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
XJ27_21045	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
XJ27_21055	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
XJ27_21060	COG0564	pseudouridine synthase activity
XJ27_21075	COG3011	Protein conserved in bacteria
XJ27_21080	COG0840	transmembrane signaling receptor activity
XJ27_21095	COG3387	PFAM Glycoside hydrolase 15-related
XJ27_21100	COG1877	trehalose-phosphatase activity
XJ27_21145	COG4771	TonB-dependent receptor
XJ27_21155	COG0667	Aldo Keto reductase
XJ27_21160	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
XJ27_21165	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
XJ27_21170	COG1116	anion transmembrane transporter activity
XJ27_21175	COG0542	response to heat
XJ27_21185	COG4206	TonB-dependent receptor
XJ27_21195	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
XJ27_21205	COG0019	diaminopimelate decarboxylase activity
XJ27_21210	COG4264	IucA IucC family
XJ27_21220	COG4264	IucA IucC family
XJ27_21230	COG4772	TonB-dependent receptor
XJ27_21240	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
XJ27_21240	COG4651	solute:proton antiporter activity
XJ27_21265	COG0488	(ABC) transporter
XJ27_21295	COG0477	Major facilitator Superfamily
XJ27_21315	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
XJ27_21360	COG0824	Thioesterase
XJ27_21370	COG0848	biopolymer transport protein
XJ27_21385	COG2885	chlorophyll binding
XJ27_21395	COG0602	queuosine metabolic process
XJ27_21400	COG0667	Aldo Keto reductase
XJ27_21445	COG3920	Histidine kinase
XJ27_21480	COG1187	pseudouridine synthase activity
XJ27_21500	COG0514	ATP-dependent DNA helicase (RecQ)
XJ27_21505	COG0783	Belongs to the Dps family
XJ27_21510	COG1643	Atp-dependent helicase
XJ27_21520	COG0837	glucose binding
XJ27_21540	COG5424	Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ
XJ27_21545	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
XJ27_21550	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
XJ27_21565	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
XJ27_21575	COG1199	ATP-dependent helicase activity
XJ27_21590	COG0189	ligase activity
XJ27_21605	COG0835	chemotaxis
XJ27_21610	COG0840	transmembrane signaling receptor activity
XJ27_21620	COG2201	protein-glutamate methylesterase activity
XJ27_21645	COG1595	DNA-templated transcription, initiation
XJ27_21650	COG2304	oxidoreductase activity
XJ27_21655	COG1446	asparaginase
XJ27_21660	COG3142	Participates in the control of copper homeostasis
XJ27_21720	COG2963	transposase activity
XJ27_21735	COG3039	Transposase
XJ27_21755	COG3537	Alpha-1,2-mannosidase
XJ27_21765	COG1486	melibiose metabolic process
XJ27_21775	COG0531	amino acid
XJ27_21800	COG1472	Belongs to the glycosyl hydrolase 3 family
XJ27_21815	COG3525	Glycosyl hydrolase, family 20, catalytic domain
XJ27_21820	COG3858	chitin binding
XJ27_21820	COG1388	LysM domain
XJ27_21835	COG0837	glucose binding
XJ27_21840	COG1385	rRNA (uridine-N3-)-methyltransferase activity
XJ27_21850	COG0494	nUDIX hydrolase
XJ27_21855	COG1218	3'(2'),5'-bisphosphate nucleotidase
XJ27_21860	COG3956	TIGRFAM MazG family protein
XJ27_21865	COG1742	UPF0060 membrane protein
XJ27_21870	COG0404	The glycine cleavage system catalyzes the degradation of glycine
XJ27_21875	COG0509	glycine decarboxylation via glycine cleavage system
XJ27_21905	COG1960	acyl-CoA dehydrogenase activity
XJ27_21910	COG2267	carboxylic ester hydrolase activity
XJ27_21915	COG1309	transcriptional regulator
XJ27_21920	COG4206	TonB-dependent receptor
XJ27_21930	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
XJ27_21935	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
XJ27_21940	COG0463	Glycosyl transferase, family 2
XJ27_21945	COG0517	IMP dehydrogenase activity
XJ27_21945	COG0516	GMP reductase activity
XJ27_21950	COG2982	Protein involved in outer membrane biogenesis
XJ27_21955	COG1272	protein, Hemolysin III
XJ27_21960	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
XJ27_21970	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
XJ27_21975	COG0626	cystathionine gamma-synthase activity
XJ27_21980	COG0460	homoserine dehydrogenase
XJ27_21980	COG0527	aspartate kinase activity
XJ27_21990	COG1760	l-serine dehydratase
XJ27_22000	COG1278	Cold shock
XJ27_22010	COG3038	cytochrome b561
XJ27_22015	COG2353	YceI-like domain
XJ27_22020	COG0784	Response regulator, receiver
XJ27_22020	COG2205	protein histidine kinase activity
XJ27_22020	COG2198	Histidine kinase
XJ27_22200	COG3328	transposase activity
XJ27_22305	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
XJ27_22315	COG2948	multi-organism process
XJ27_22345	COG3039	Transposase
XJ27_22375	COG2963	transposase activity
XJ27_22380	COG2801	Transposase and inactivated derivatives
XJ27_22410	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
XJ27_22425	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs